diff --git a/database/github/ANSES-Ploufragan/vvv2_display/metadata.json b/database/github/ANSES-Ploufragan/vvv2_display/metadata.json new file mode 100644 index 000000000..28715d0ae --- /dev/null +++ b/database/github/ANSES-Ploufragan/vvv2_display/metadata.json @@ -0,0 +1,43 @@ +{ + "parser": "github", + "uid": "github/ANSES-Ploufragan/vvv2_display", + "url": "https://github.com/ANSES-Ploufragan/vvv2_display", + "data": { + "doi": "10.3390/v17101385", + "name": "vvv2_display", + "url": "https://github.com/ANSES-Ploufragan/vvv2_display", + "full_name": "ANSES-Ploufragan/vvv2_display", + "html_url": "https://github.com/ANSES-Ploufragan/vvv2_display", + "description": "Create png file of variants proportions in an assembly/reference including CDS positions using output of vadr 1.5.1 (annotation) and vardict-java 1.8.3 (variant calling)", + "created_at": "2022-05-19T09:07:13Z", + "updated_at": "2026-02-11T17:33:21Z", + "clone_url": "https://github.com/ANSES-Ploufragan/vvv2_display.git", + "size": 5453, + "stargazers_count": 1, + "watchers_count": 1, + "language": "Python", + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/ANSES-Ploufragan", + "avatar_url": "https://avatars.githubusercontent.com/u/43985978?v=4", + "login": "ANSES-Ploufragan", + "type": "Organization" + }, + "topics": [ + "annotation", + "bioinformatics", + "display", + "variant-calling", + "virus" + ], + "timestamp": "2026-02-15 01:12:45.223966", + "avatar": "https://avatars.githubusercontent.com/u/43985978?v=4" + } +} \ No newline at end of file diff --git a/database/github/AmeryGration/dyad/metadata.json b/database/github/AmeryGration/dyad/metadata.json new file mode 100644 index 000000000..c3e297d37 --- /dev/null +++ b/database/github/AmeryGration/dyad/metadata.json @@ -0,0 +1,36 @@ +{ + "parser": "github", + "uid": "github/AmeryGration/dyad", + "url": "https://github.com/AmeryGration/dyad", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18561679", + "name": "dyad", + "url": "https://github.com/AmeryGration/dyad", + "full_name": "AmeryGration/dyad", + "html_url": "https://github.com/AmeryGration/dyad", + "description": "Two-body dynamics and binary-star statistics.", + "created_at": "2023-10-25T09:28:02Z", + "updated_at": "2026-02-09T18:36:18Z", + "clone_url": "https://github.com/AmeryGration/dyad.git", + "size": 141956, + "stargazers_count": 1, + "watchers_count": 1, + "language": "Python", + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/AmeryGration", + "avatar_url": "https://avatars.githubusercontent.com/u/15691891?v=4", + "login": "AmeryGration", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:26.015721", + "avatar": "https://avatars.githubusercontent.com/u/15691891?v=4" + } +} \ No newline at end of file diff --git a/database/github/KarchinLab/open-cravat-readthedocs/metadata.json b/database/github/KarchinLab/open-cravat-readthedocs/metadata.json new file mode 100644 index 000000000..3ba52282b --- /dev/null +++ b/database/github/KarchinLab/open-cravat-readthedocs/metadata.json @@ -0,0 +1,29 @@ +{ + "parser": "github", + "uid": "github/KarchinLab/open-cravat-readthedocs", + "url": "https://github.com/KarchinLab/open-cravat-readthedocs", + "data": { + "doi": "10.1200/cci.19.00132", + "name": "open-cravat-readthedocs", + "url": "https://github.com/KarchinLab/open-cravat-readthedocs", + "full_name": "KarchinLab/open-cravat-readthedocs", + "html_url": "https://github.com/KarchinLab/open-cravat-readthedocs", + "created_at": "2020-12-23T16:50:42Z", + "updated_at": "2025-08-11T17:50:13Z", + "clone_url": "https://github.com/KarchinLab/open-cravat-readthedocs.git", + "size": 32915, + "stargazers_count": 1, + "watchers_count": 1, + "language": "Python", + "open_issues_count": 2, + "subscribers_count": 10, + "owner": { + "html_url": "https://github.com/KarchinLab", + "avatar_url": "https://avatars.githubusercontent.com/u/12953773?v=4", + "login": "KarchinLab", + "type": "Organization" + }, + "timestamp": "2026-02-15 01:12:47.649691", + "avatar": "https://avatars.githubusercontent.com/u/12953773?v=4" + } +} \ No newline at end of file diff --git a/database/github/QTC-UMD/rydiqule/metadata.json b/database/github/QTC-UMD/rydiqule/metadata.json new file mode 100644 index 000000000..c3fe51644 --- /dev/null +++ b/database/github/QTC-UMD/rydiqule/metadata.json @@ -0,0 +1,45 @@ +{ + "parser": "github", + "uid": "github/QTC-UMD/rydiqule", + "url": "https://github.com/QTC-UMD/rydiqule", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18341352", + "name": "rydiqule", + "url": "https://github.com/QTC-UMD/rydiqule", + "full_name": "QTC-UMD/rydiqule", + "html_url": "https://github.com/QTC-UMD/rydiqule", + "description": "Rydberg Sensor Interactive Quantum Physics Module", + "created_at": "2023-05-07T15:13:01Z", + "updated_at": "2026-01-22T14:31:43Z", + "clone_url": "https://github.com/QTC-UMD/rydiqule.git", + "homepage": "https://rydiqule.readthedocs.io/", + "size": 6931, + "stargazers_count": 25, + "watchers_count": 25, + "language": "Python", + "open_issues_count": 10, + "license": { + "key": "apache-2.0", + "name": "Apache License 2.0", + "spdx_id": "Apache-2.0", + "url": "https://api.github.com/licenses/apache-2.0", + "node_id": "MDc6TGljZW5zZTI=" + }, + "subscribers_count": 2, + "owner": { + "html_url": "https://github.com/QTC-UMD", + "avatar_url": "https://avatars.githubusercontent.com/u/126897874?v=4", + "login": "QTC-UMD", + "type": "Organization" + }, + "topics": [ + "atomic-physics", + "atomic-sensors", + "electrometry", + "quantum-optics", + "rydberg" + ], + "timestamp": "2026-02-15 01:12:26.812320", + "avatar": "https://avatars.githubusercontent.com/u/126897874?v=4" + } +} \ No newline at end of file diff --git a/database/github/SAIL-Labs/PIRATES/metadata.json b/database/github/SAIL-Labs/PIRATES/metadata.json new file mode 100644 index 000000000..8f57f3682 --- /dev/null +++ b/database/github/SAIL-Labs/PIRATES/metadata.json @@ -0,0 +1,39 @@ +{ + "parser": "github", + "uid": "github/SAIL-Labs/PIRATES", + "url": "https://github.com/SAIL-Labs/PIRATES", + "data": { + "doi": [ + "https://ui.adsabs.harvard.edu/abs/2025arXiv250511950L", + "https://ui.adsabs.harvard.edu/abs/2025ascl.soft07029L/abstract" + ], + "title": "PIRATES: Polarimetric Image Reconstruction AI for Tracing Evolved Structures", + "url": "https://github.com/SAIL-Labs/PIRATES", + "name": "PIRATES", + "full_name": "SAIL-Labs/PIRATES", + "html_url": "https://github.com/SAIL-Labs/PIRATES", + "description": "Code for the PIRATES image reconstruction paper", + "created_at": "2025-11-23T23:15:13Z", + "updated_at": "2025-11-24T03:53:25Z", + "clone_url": "https://github.com/SAIL-Labs/PIRATES.git", + "size": 54, + "stargazers_count": 2, + "watchers_count": 2, + "language": "Python", + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "owner": { + "html_url": "https://github.com/SAIL-Labs", + "avatar_url": "https://avatars.githubusercontent.com/u/19316639?v=4", + "login": "SAIL-Labs", + "type": "Organization" + }, + "timestamp": "2026-02-15 01:12:06.803225", + "avatar": "https://avatars.githubusercontent.com/u/19316639?v=4" + } +} \ No newline at end of file diff --git a/database/github/VirtualPhotonics/MieSimulatorGUI/metadata.json b/database/github/VirtualPhotonics/MieSimulatorGUI/metadata.json new file mode 100644 index 000000000..4d4a8d5ab --- /dev/null +++ b/database/github/VirtualPhotonics/MieSimulatorGUI/metadata.json @@ -0,0 +1,36 @@ +{ + "parser": "github", + "uid": "github/VirtualPhotonics/MieSimulatorGUI", + "url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18462320", + "name": "MieSimulatorGUI", + "url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", + "full_name": "VirtualPhotonics/MieSimulatorGUI", + "html_url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", + "description": "Mie Simulator GUI", + "created_at": "2017-07-07T17:21:38Z", + "updated_at": "2026-02-12T21:33:01Z", + "clone_url": "https://github.com/VirtualPhotonics/MieSimulatorGUI.git", + "size": 13926, + "stargazers_count": 28, + "watchers_count": 28, + "language": "C++", + "license": { + "key": "mit", + "name": "MIT License", + "spdx_id": "MIT", + "url": "https://api.github.com/licenses/mit", + "node_id": "MDc6TGljZW5zZTEz" + }, + "subscribers_count": 3, + "owner": { + "html_url": "https://github.com/VirtualPhotonics", + "avatar_url": "https://avatars.githubusercontent.com/u/26932731?v=4", + "login": "VirtualPhotonics", + "type": "Organization" + }, + "timestamp": "2026-02-15 01:12:26.406609", + "avatar": "https://avatars.githubusercontent.com/u/26932731?v=4" + } +} \ No newline at end of file diff --git a/database/github/baharmon/r.earthworks/metadata.json b/database/github/baharmon/r.earthworks/metadata.json new file mode 100644 index 000000000..4985fe428 --- /dev/null +++ b/database/github/baharmon/r.earthworks/metadata.json @@ -0,0 +1,43 @@ +{ + "parser": "github", + "uid": "github/baharmon/r.earthworks", + "url": "https://github.com/baharmon/r.earthworks", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18407200", + "name": "r.earthworks", + "url": "https://github.com/baharmon/r.earthworks", + "full_name": "baharmon/r.earthworks", + "html_url": "https://github.com/baharmon/r.earthworks", + "description": "A terrain modeling tool for the GRASS geocomputation engine", + "created_at": "2024-10-07T19:42:52Z", + "updated_at": "2026-02-13T17:03:37Z", + "clone_url": "https://github.com/baharmon/r.earthworks.git", + "homepage": "https://grass.osgeo.org/grass85/manuals/addons/r.earthworks.html", + "size": 14692, + "stargazers_count": 1, + "watchers_count": 1, + "language": "Jupyter Notebook", + "open_issues_count": 4, + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/baharmon", + "avatar_url": "https://avatars.githubusercontent.com/u/10392927?v=4", + "login": "baharmon", + "type": "User" + }, + "topics": [ + "earthworks", + "terrain", + "grass-gis" + ], + "timestamp": "2026-02-15 01:12:24.977748", + "avatar": "https://avatars.githubusercontent.com/u/10392927?v=4" + } +} \ No newline at end of file diff --git a/database/github/c5shen/TIPP3/metadata.json b/database/github/c5shen/TIPP3/metadata.json new file mode 100644 index 000000000..5887b30f0 --- /dev/null +++ b/database/github/c5shen/TIPP3/metadata.json @@ -0,0 +1,36 @@ +{ + "parser": "github", + "uid": "github/c5shen/TIPP3", + "url": "https://github.com/c5shen/TIPP3", + "data": { + "doi": "10.1371/journal.pcbi.1012593", + "name": "TIPP3", + "url": "https://github.com/c5shen/TIPP3", + "full_name": "c5shen/TIPP3", + "html_url": "https://github.com/c5shen/TIPP3", + "description": "TIPP3 and TIPP3-fast: new phylogeny-based metagenomic profiling and taxonomic identification tool.", + "created_at": "2022-11-22T17:51:42Z", + "updated_at": "2025-12-15T18:43:42Z", + "clone_url": "https://github.com/c5shen/TIPP3.git", + "size": 64616, + "stargazers_count": 3, + "watchers_count": 3, + "language": "Java", + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/c5shen", + "avatar_url": "https://avatars.githubusercontent.com/u/19351031?v=4", + "login": "c5shen", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:46.445061", + "avatar": "https://avatars.githubusercontent.com/u/19351031?v=4" + } +} \ No newline at end of file diff --git a/database/github/dalipconstant/dalip-estimator/metadata.json b/database/github/dalipconstant/dalip-estimator/metadata.json new file mode 100644 index 000000000..c7ba25b25 --- /dev/null +++ b/database/github/dalipconstant/dalip-estimator/metadata.json @@ -0,0 +1,34 @@ +{ + "parser": "github", + "uid": "github/dalipconstant/dalip-estimator", + "url": "https://github.com/dalipconstant/dalip-estimator", + "data": { + "doi": [], + "title": "dalip-estimator: Empirical gravitational acceleration estimator from lensing observables", + "url": "https://github.com/dalipconstant/dalip-estimator", + "name": "dalip-estimator", + "full_name": "dalipconstant/dalip-estimator", + "html_url": "https://github.com/dalipconstant/dalip-estimator", + "description": "Empirical gravitational acceleration estimator from lensing observables", + "created_at": "2026-01-31T18:31:52Z", + "updated_at": "2026-02-11T18:29:16Z", + "clone_url": "https://github.com/dalipconstant/dalip-estimator.git", + "size": 725, + "language": "TeX", + "license": { + "key": "mit", + "name": "MIT License", + "spdx_id": "MIT", + "url": "https://api.github.com/licenses/mit", + "node_id": "MDc6TGljZW5zZTEz" + }, + "owner": { + "html_url": "https://github.com/dalipconstant", + "avatar_url": "https://avatars.githubusercontent.com/u/232784211?v=4", + "login": "dalipconstant", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:05.566005", + "avatar": "https://avatars.githubusercontent.com/u/232784211?v=4" + } +} \ No newline at end of file diff --git a/database/github/florianfranz/topo_chronia/metadata.json b/database/github/florianfranz/topo_chronia/metadata.json new file mode 100644 index 000000000..50dbeda70 --- /dev/null +++ b/database/github/florianfranz/topo_chronia/metadata.json @@ -0,0 +1,48 @@ +{ + "parser": "github", + "uid": "github/florianfranz/topo_chronia", + "url": "https://github.com/florianfranz/topo_chronia", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18623621", + "name": "topo_chronia", + "url": "https://github.com/florianfranz/topo_chronia", + "full_name": "florianfranz/topo_chronia", + "html_url": "https://github.com/florianfranz/topo_chronia", + "description": "TopoChronia: A QGIS plugin for the creation of fully quantified palaeogeographic maps", + "created_at": "2025-01-22T16:10:35Z", + "updated_at": "2026-02-13T07:39:44Z", + "clone_url": "https://github.com/florianfranz/topo_chronia.git", + "homepage": "https://topo-chronia.readthedocs.io/en/latest/", + "size": 205937, + "stargazers_count": 9, + "watchers_count": 9, + "language": "Python", + "open_issues_count": 1, + "license": { + "key": "other", + "name": "Other", + "spdx_id": "NOASSERTION", + "url": null, + "node_id": "MDc6TGljZW5zZTA=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/florianfranz", + "avatar_url": "https://avatars.githubusercontent.com/u/42937007?v=4", + "login": "florianfranz", + "type": "User" + }, + "topics": [ + "palaeogeography", + "tectonics", + "palaeotopography", + "panalesis", + "palaeoclimate", + "plate-tectonics", + "qgis", + "qgis-plugin" + ], + "timestamp": "2026-02-15 01:12:24.282285", + "avatar": "https://avatars.githubusercontent.com/u/42937007?v=4" + } +} \ No newline at end of file diff --git a/database/github/hamidnpc/Neloura/metadata.json b/database/github/hamidnpc/Neloura/metadata.json new file mode 100644 index 000000000..e51cbb210 --- /dev/null +++ b/database/github/hamidnpc/Neloura/metadata.json @@ -0,0 +1,41 @@ +{ + "parser": "github", + "uid": "github/hamidnpc/Neloura", + "url": "https://github.com/hamidnpc/Neloura", + "data": { + "doi": [], + "title": "Neloura", + "url": "https://github.com/hamidnpc/Neloura", + "name": "Neloura", + "full_name": "hamidnpc/Neloura", + "html_url": "https://github.com/hamidnpc/Neloura", + "description": "FITS File Visualization, Cataloging, and Interaction Tool", + "created_at": "2025-02-12T10:50:27Z", + "updated_at": "2026-02-11T20:27:46Z", + "clone_url": "https://github.com/hamidnpc/Neloura.git", + "homepage": "https://neloura.com", + "size": 39042, + "stargazers_count": 4, + "watchers_count": 4, + "language": "JavaScript", + "license": { + "key": "bsd-3-clause", + "name": "BSD 3-Clause \"New\" or \"Revised\" License", + "spdx_id": "BSD-3-Clause", + "url": "https://api.github.com/licenses/bsd-3-clause", + "node_id": "MDc6TGljZW5zZTU=" + }, + "subscribers_count": 2, + "owner": { + "html_url": "https://github.com/hamidnpc", + "avatar_url": "https://avatars.githubusercontent.com/u/3179916?v=4", + "login": "hamidnpc", + "type": "User" + }, + "topics": [ + "astronomy" + ], + "timestamp": "2026-02-15 01:12:06.145002", + "avatar": "https://avatars.githubusercontent.com/u/3179916?v=4" + } +} \ No newline at end of file diff --git a/database/github/karlropkins/AQEval/metadata.json b/database/github/karlropkins/AQEval/metadata.json new file mode 100644 index 000000000..109740269 --- /dev/null +++ b/database/github/karlropkins/AQEval/metadata.json @@ -0,0 +1,37 @@ +{ + "parser": "github", + "uid": "github/karlropkins/AQEval", + "url": "https://github.com/karlropkins/AQEval", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18440452", + "name": "AQEval", + "url": "https://github.com/karlropkins/AQEval", + "full_name": "karlropkins/AQEval", + "html_url": "https://github.com/karlropkins/AQEval", + "description": "R code for Air Quality Evaluation ", + "created_at": "2022-03-18T07:51:55Z", + "updated_at": "2026-02-12T11:56:14Z", + "clone_url": "https://github.com/karlropkins/AQEval.git", + "homepage": "https://karlropkins.github.io/AQEval/", + "size": 24463, + "stargazers_count": 10, + "watchers_count": 10, + "language": "R", + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 2, + "owner": { + "html_url": "https://github.com/karlropkins", + "avatar_url": "https://avatars.githubusercontent.com/u/22469070?v=4", + "login": "karlropkins", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:24.637419", + "avatar": "https://avatars.githubusercontent.com/u/22469070?v=4" + } +} \ No newline at end of file diff --git a/database/github/motu-tool/mOTUs/metadata.json b/database/github/motu-tool/mOTUs/metadata.json new file mode 100644 index 000000000..5ba9df259 --- /dev/null +++ b/database/github/motu-tool/mOTUs/metadata.json @@ -0,0 +1,37 @@ +{ + "parser": "github", + "uid": "github/motu-tool/mOTUs", + "url": "https://github.com/motu-tool/mOTUs", + "data": { + "doi": "10.1093/nar/gkae1004", + "name": "mOTUs", + "url": "https://github.com/motu-tool/mOTUs", + "full_name": "motu-tool/mOTUs", + "html_url": "https://github.com/motu-tool/mOTUs", + "description": "motus - a tool for marker gene-based OTU (mOTU) profiling", + "created_at": "2018-03-23T14:26:35Z", + "updated_at": "2026-02-11T12:26:35Z", + "clone_url": "https://github.com/motu-tool/mOTUs.git", + "size": 1864, + "stargazers_count": 169, + "watchers_count": 169, + "language": "Python", + "open_issues_count": 8, + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 10, + "owner": { + "html_url": "https://github.com/motu-tool", + "avatar_url": "https://avatars.githubusercontent.com/u/37665514?v=4", + "login": "motu-tool", + "type": "Organization" + }, + "timestamp": "2026-02-15 01:12:45.579380", + "avatar": "https://avatars.githubusercontent.com/u/37665514?v=4" + } +} \ No newline at end of file diff --git a/database/github/ncas-cms/pyfive/metadata.json b/database/github/ncas-cms/pyfive/metadata.json new file mode 100644 index 000000000..b5615e620 --- /dev/null +++ b/database/github/ncas-cms/pyfive/metadata.json @@ -0,0 +1,38 @@ +{ + "parser": "github", + "uid": "github/ncas-cms/pyfive", + "url": "https://github.com/NCAS-CMS/pyfive", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18599472", + "name": "pyfive", + "url": "https://github.com/NCAS-CMS/pyfive", + "full_name": "NCAS-CMS/pyfive", + "html_url": "https://github.com/NCAS-CMS/pyfive", + "description": "A pure Python HDF5 file reader", + "created_at": "2016-05-02T02:45:59Z", + "updated_at": "2026-02-13T17:21:19Z", + "clone_url": "https://github.com/NCAS-CMS/pyfive.git", + "homepage": "https://pyfive.readthedocs.io", + "size": 2646, + "stargazers_count": 100, + "watchers_count": 100, + "language": "Python", + "open_issues_count": 10, + "license": { + "key": "bsd-3-clause", + "name": "BSD 3-Clause \"New\" or \"Revised\" License", + "spdx_id": "BSD-3-Clause", + "url": "https://api.github.com/licenses/bsd-3-clause", + "node_id": "MDc6TGljZW5zZTU=" + }, + "subscribers_count": 9, + "owner": { + "html_url": "https://github.com/NCAS-CMS", + "avatar_url": "https://avatars.githubusercontent.com/u/31280705?v=4", + "login": "NCAS-CMS", + "type": "Organization" + }, + "timestamp": "2026-02-15 01:12:25.584486", + "avatar": "https://avatars.githubusercontent.com/u/31280705?v=4" + } +} \ No newline at end of file diff --git a/database/github/nvnsudharsan/SOLWEIG-GPU/metadata.json b/database/github/nvnsudharsan/SOLWEIG-GPU/metadata.json new file mode 100644 index 000000000..fc9dcdb7d --- /dev/null +++ b/database/github/nvnsudharsan/SOLWEIG-GPU/metadata.json @@ -0,0 +1,37 @@ +{ + "parser": "github", + "uid": "github/nvnsudharsan/SOLWEIG-GPU", + "url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", + "data": { + "doi": "https://doi.org/10.5281/zenodo.17048977", + "name": "SOLWEIG-GPU", + "url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", + "full_name": "nvnsudharsan/SOLWEIG-GPU", + "html_url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", + "description": "SOLWEIG-GPU is a Python package and command-line interface for running the SOLWEIG (Solar and LongWave Environmental Irradiance Geometry) model on CPU or GPU (if available).", + "created_at": "2025-04-03T06:03:00Z", + "updated_at": "2026-02-09T20:28:47Z", + "clone_url": "https://github.com/nvnsudharsan/SOLWEIG-GPU.git", + "size": 37249, + "stargazers_count": 15, + "watchers_count": 15, + "language": "Python", + "open_issues_count": 2, + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 2, + "owner": { + "html_url": "https://github.com/nvnsudharsan", + "avatar_url": "https://avatars.githubusercontent.com/u/57706774?v=4", + "login": "nvnsudharsan", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:23.788858", + "avatar": "https://avatars.githubusercontent.com/u/57706774?v=4" + } +} \ No newline at end of file diff --git a/database/github/pirovc/ganon_benchmark/metadata.json b/database/github/pirovc/ganon_benchmark/metadata.json new file mode 100644 index 000000000..aebaa6994 --- /dev/null +++ b/database/github/pirovc/ganon_benchmark/metadata.json @@ -0,0 +1,35 @@ +{ + "parser": "github", + "uid": "github/pirovc/ganon_benchmark", + "url": "https://github.com/pirovc/ganon_benchmark", + "data": { + "doi": "10.1093/nargab/lqaf094", + "name": "ganon_benchmark", + "url": "https://github.com/pirovc/ganon_benchmark", + "full_name": "pirovc/ganon_benchmark", + "html_url": "https://github.com/pirovc/ganon_benchmark", + "description": "benchmarking scripts for ganon", + "created_at": "2019-07-10T14:35:14Z", + "updated_at": "2020-08-08T05:10:11Z", + "clone_url": "https://github.com/pirovc/ganon_benchmark.git", + "size": 397241, + "stargazers_count": 1, + "watchers_count": 1, + "language": "Python", + "license": { + "key": "mit", + "name": "MIT License", + "spdx_id": "MIT", + "url": "https://api.github.com/licenses/mit", + "node_id": "MDc6TGljZW5zZTEz" + }, + "owner": { + "html_url": "https://github.com/pirovc", + "avatar_url": "https://avatars.githubusercontent.com/u/4673375?v=4", + "login": "pirovc", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:47.280215", + "avatar": "https://avatars.githubusercontent.com/u/4673375?v=4" + } +} \ No newline at end of file diff --git a/database/github/rmpiro/decompTumor2Sig/metadata.json b/database/github/rmpiro/decompTumor2Sig/metadata.json new file mode 100644 index 000000000..295b6ce0a --- /dev/null +++ b/database/github/rmpiro/decompTumor2Sig/metadata.json @@ -0,0 +1,30 @@ +{ + "parser": "github", + "uid": "github/rmpiro/decompTumor2Sig", + "url": "https://github.com/rmpiro/decompTumor2Sig", + "data": { + "doi": "10.1186/s12859-019-2688-6", + "name": "decompTumor2Sig", + "url": "https://github.com/rmpiro/decompTumor2Sig", + "full_name": "rmpiro/decompTumor2Sig", + "html_url": "https://github.com/rmpiro/decompTumor2Sig", + "description": "decompTumor2Sig - Decomposition of individual tumors into mutational signatures", + "created_at": "2018-07-27T01:49:44Z", + "updated_at": "2022-07-24T12:38:00Z", + "clone_url": "https://github.com/rmpiro/decompTumor2Sig.git", + "size": 5913, + "stargazers_count": 1, + "watchers_count": 1, + "language": "R", + "open_issues_count": 1, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/rmpiro", + "avatar_url": "https://avatars.githubusercontent.com/u/24794272?v=4", + "login": "rmpiro", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:47.997913", + "avatar": "https://avatars.githubusercontent.com/u/24794272?v=4" + } +} \ No newline at end of file diff --git a/database/github/ropensci/c3dr/metadata.json b/database/github/ropensci/c3dr/metadata.json new file mode 100644 index 000000000..7b99150e4 --- /dev/null +++ b/database/github/ropensci/c3dr/metadata.json @@ -0,0 +1,42 @@ +{ + "parser": "github", + "uid": "github/ropensci/c3dr", + "url": "https://github.com/ropensci/c3dr", + "data": { + "doi": "https://doi.org/10.5281/zenodo.16919595", + "name": "c3dr", + "url": "https://github.com/ropensci/c3dr", + "full_name": "ropensci/c3dr", + "html_url": "https://github.com/ropensci/c3dr", + "description": "Read and write C3D motion capture data in R", + "created_at": "2024-07-12T21:17:33Z", + "updated_at": "2025-10-17T20:42:51Z", + "clone_url": "https://github.com/ropensci/c3dr.git", + "homepage": "https://docs.ropensci.org/c3dr/", + "size": 2573, + "stargazers_count": 4, + "watchers_count": 4, + "language": "C++", + "license": { + "key": "other", + "name": "Other", + "spdx_id": "NOASSERTION", + "url": null, + "node_id": "MDc6TGljZW5zZTA=" + }, + "subscribers_count": 2, + "owner": { + "html_url": "https://github.com/ropensci", + "avatar_url": "https://avatars.githubusercontent.com/u/1200269?v=4", + "login": "ropensci", + "type": "Organization" + }, + "topics": [ + "r", + "r-package", + "r-stats" + ], + "timestamp": "2026-02-15 01:12:27.266483", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4" + } +} \ No newline at end of file diff --git a/database/github/showteeth/GEfetch2R/metadata.json b/database/github/showteeth/GEfetch2R/metadata.json new file mode 100644 index 000000000..53761864f --- /dev/null +++ b/database/github/showteeth/GEfetch2R/metadata.json @@ -0,0 +1,51 @@ +{ + "parser": "github", + "uid": "github/showteeth/GEfetch2R", + "url": "https://github.com/showteeth/GEfetch2R", + "data": { + "name": "GEfetch2R", + "url": "https://github.com/showteeth/GEfetch2R", + "full_name": "showteeth/GEfetch2R", + "html_url": "https://github.com/showteeth/GEfetch2R", + "private": false, + "description": "GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools", + "created_at": "2023-07-12T06:00:56Z", + "updated_at": "2026-02-11T13:02:17Z", + "clone_url": "https://github.com/showteeth/GEfetch2R.git", + "homepage": "https://showteeth.github.io/GEfetch2R/", + "size": 41784, + "stargazers_count": 39, + "watchers_count": 39, + "language": "R", + "open_issues_count": 0, + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/showteeth", + "avatar_url": "https://avatars.githubusercontent.com/u/43517166?v=4", + "login": "showteeth", + "type": "User" + }, + "topics": [ + "geo", + "single-cell-rna-seq", + "zenodo", + "panglaodb", + "ucsc-cell-browser", + "bam", + "fastq", + "format-conversion-tool", + "human-cell-atlas", + "sra", + "cellxgene" + ], + "timestamp": "2026-02-15 01:12:46.915423", + "avatar": "https://avatars.githubusercontent.com/u/43517166?v=4" + } +} \ No newline at end of file diff --git a/database/github/steineggerlab/Metabuli/metadata.json b/database/github/steineggerlab/Metabuli/metadata.json new file mode 100644 index 000000000..34820b583 --- /dev/null +++ b/database/github/steineggerlab/Metabuli/metadata.json @@ -0,0 +1,44 @@ +{ + "parser": "github", + "uid": "github/steineggerlab/Metabuli", + "url": "https://github.com/steineggerlab/Metabuli", + "data": { + "doi": "10.1038/s41592-024-02273-y", + "name": "Metabuli", + "url": "https://github.com/steineggerlab/Metabuli", + "full_name": "steineggerlab/Metabuli", + "html_url": "https://github.com/steineggerlab/Metabuli", + "description": "Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.", + "created_at": "2020-09-09T05:04:49Z", + "updated_at": "2026-02-12T05:38:08Z", + "clone_url": "https://github.com/steineggerlab/Metabuli.git", + "size": 97369, + "stargazers_count": 166, + "watchers_count": 166, + "language": "C++", + "open_issues_count": 33, + "license": { + "key": "gpl-3.0", + "name": "GNU General Public License v3.0", + "spdx_id": "GPL-3.0", + "url": "https://api.github.com/licenses/gpl-3.0", + "node_id": "MDc6TGljZW5zZTk=" + }, + "subscribers_count": 8, + "owner": { + "html_url": "https://github.com/steineggerlab", + "avatar_url": "https://avatars.githubusercontent.com/u/62094016?v=4", + "login": "steineggerlab", + "type": "Organization" + }, + "topics": [ + "bioinformatics", + "k-mer", + "metagenomics", + "taxonomic-classification", + "taxonomy" + ], + "timestamp": "2026-02-15 01:12:46.082522", + "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4" + } +} \ No newline at end of file diff --git a/database/github/subhk/BiGSTARS.jl/metadata.json b/database/github/subhk/BiGSTARS.jl/metadata.json new file mode 100644 index 000000000..9edd31b6b --- /dev/null +++ b/database/github/subhk/BiGSTARS.jl/metadata.json @@ -0,0 +1,37 @@ +{ + "parser": "github", + "uid": "github/subhk/BiGSTARS.jl", + "url": "https://github.com/subhk/BiGSTARS.jl", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18385010", + "name": "BiGSTARS.jl", + "url": "https://github.com/subhk/BiGSTARS.jl", + "full_name": "subhk/BiGSTARS.jl", + "html_url": "https://github.com/subhk/BiGSTARS.jl", + "description": "A Julia toolkit for bi-global linear stability analysis for geophysical flows using Chebyshev-Fourier spectral collocation method.", + "created_at": "2025-05-22T13:36:40Z", + "updated_at": "2026-02-13T16:34:41Z", + "clone_url": "https://github.com/subhk/BiGSTARS.jl.git", + "homepage": "https://subhk.github.io/BiGSTARSDocumentation/stable/", + "size": 15925, + "stargazers_count": 3, + "watchers_count": 3, + "language": "Julia", + "license": { + "key": "mit", + "name": "MIT License", + "spdx_id": "MIT", + "url": "https://api.github.com/licenses/mit", + "node_id": "MDc6TGljZW5zZTEz" + }, + "subscribers_count": 1, + "owner": { + "html_url": "https://github.com/subhk", + "avatar_url": "https://avatars.githubusercontent.com/u/13347479?v=4", + "login": "subhk", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:23.455214", + "avatar": "https://avatars.githubusercontent.com/u/13347479?v=4" + } +} \ No newline at end of file diff --git a/database/github/yuhaoran/CUBE2/metadata.json b/database/github/yuhaoran/CUBE2/metadata.json new file mode 100644 index 000000000..f418b6edb --- /dev/null +++ b/database/github/yuhaoran/CUBE2/metadata.json @@ -0,0 +1,27 @@ +{ + "parser": "github", + "uid": "github/yuhaoran/CUBE2", + "url": "https://github.com/yuhaoran/CUBE2", + "data": { + "doi": [], + "title": "CUBE2: A cosmological N-body simulation code optimized for scalability, accuracy, and memory efficiency.", + "url": "https://github.com/yuhaoran/CUBE2", + "name": "CUBE2", + "full_name": "yuhaoran/CUBE2", + "html_url": "https://github.com/yuhaoran/CUBE2", + "description": "CUBE2 is a open souree cosmological N-body code emphasizing memory e\ufb03ciency, com- putational performance, scalability and precision", + "created_at": "2026-01-16T13:51:04Z", + "updated_at": "2026-01-19T14:42:11Z", + "clone_url": "https://github.com/yuhaoran/CUBE2.git", + "size": 150, + "language": "Fortran", + "owner": { + "html_url": "https://github.com/yuhaoran", + "avatar_url": "https://avatars.githubusercontent.com/u/6211228?v=4", + "login": "yuhaoran", + "type": "User" + }, + "timestamp": "2026-02-15 01:12:05.215098", + "avatar": "https://avatars.githubusercontent.com/u/6211228?v=4" + } +} \ No newline at end of file diff --git a/database/gitlab/David_Haegele/line_racer/metadata.json b/database/gitlab/David_Haegele/line_racer/metadata.json new file mode 100644 index 000000000..4169247f3 --- /dev/null +++ b/database/gitlab/David_Haegele/line_racer/metadata.json @@ -0,0 +1,35 @@ +{ + "parser": "gitlab", + "uid": "gitlab/David_Haegele/line_racer", + "url": "https://gitlab.com/David_Haegele/line_racer", + "data": { + "doi": [], + "title": "line racer: Rapid Calculation of Exoplanetary Radiative Opacities", + "url": "https://gitlab.com/David_Haegele/line_racer", + "id": 76227706, + "name": "line_racer", + "name_with_namespace": "David H\u00e4gele / line_racer", + "path": "line_racer", + "path_with_namespace": "David_Haegele/line_racer", + "created_at": "2025-11-20T08:56:31.563Z", + "default_branch": "main", + "ssh_url_to_repo": "git@gitlab.com:David_Haegele/line_racer.git", + "http_url_to_repo": "https://gitlab.com/David_Haegele/line_racer.git", + "web_url": "https://gitlab.com/David_Haegele/line_racer", + "readme_url": "https://gitlab.com/David_Haegele/line_racer/-/blob/main/README.rst", + "last_activity_at": "2026-02-12T13:52:42.643Z", + "visibility": "public", + "namespace": { + "id": 59733380, + "name": "David H\u00e4gele", + "path": "David_Haegele", + "kind": "user", + "full_path": "David_Haegele", + "parent_id": null, + "avatar_url": "https://secure.gravatar.com/avatar/f50ab1b20cfba6857837d86eed330caa66942ac5f66553037b71c40c661ac3e0?s=80&d=identicon", + "web_url": "https://gitlab.com/David_Haegele" + }, + "timestamp": "2026-02-15 01:12:05.769788", + "avatar": "https://gitlab.comhttps://secure.gravatar.com/avatar/f50ab1b20cfba6857837d86eed330caa66942ac5f66553037b71c40c661ac3e0?s=80&d=identicon" + } +} \ No newline at end of file diff --git a/database/gitlab/micromorph/ratel/metadata.json b/database/gitlab/micromorph/ratel/metadata.json new file mode 100644 index 000000000..83ee980d5 --- /dev/null +++ b/database/gitlab/micromorph/ratel/metadata.json @@ -0,0 +1,54 @@ +{ + "parser": "gitlab", + "uid": "gitlab/micromorph/ratel", + "url": "https://gitlab.com/micromorph/ratel", + "data": { + "doi": "https://doi.org/10.5281/zenodo.18509304", + "id": 29759477, + "description": "Extensible, performance-portable solid mechanics with libCEED and PETSc", + "name": "Ratel", + "name_with_namespace": "micromorph / Ratel", + "path": "ratel", + "path_with_namespace": "micromorph/ratel", + "created_at": "2021-09-20T19:02:14.059Z", + "default_branch": "main", + "tag_list": [ + "elasticity", + "finite elements", + "libceed", + "matrix-free", + "petsc", + "solid mechanics" + ], + "topics": [ + "elasticity", + "finite elements", + "libceed", + "matrix-free", + "petsc", + "solid mechanics" + ], + "ssh_url_to_repo": "git@gitlab.com:micromorph/ratel.git", + "http_url_to_repo": "https://gitlab.com/micromorph/ratel.git", + "web_url": "https://gitlab.com/micromorph/ratel", + "readme_url": "https://gitlab.com/micromorph/ratel/-/blob/main/README.md", + "forks_count": 10, + "avatar_url": "https://gitlab.com/uploads/-/system/project/avatar/29759477/Ratellogo.png", + "star_count": 10, + "last_activity_at": "2026-02-13T14:38:01.330Z", + "visibility": "public", + "namespace": { + "id": 7715281, + "name": "micromorph", + "path": "micromorph", + "kind": "group", + "full_path": "micromorph", + "parent_id": null, + "avatar_url": null, + "web_url": "https://gitlab.com/groups/micromorph" + }, + "timestamp": "2026-02-15 01:12:25.183599", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/29759477/Ratellogo.png", + "url": "https://gitlab.com/micromorph/ratel" + } +} \ No newline at end of file diff --git a/docs/api/repos/github/ANSES-Ploufragan/vvv2_display/index.json b/docs/api/repos/github/ANSES-Ploufragan/vvv2_display/index.json new file mode 100644 index 000000000..3a56c1867 --- /dev/null +++ b/docs/api/repos/github/ANSES-Ploufragan/vvv2_display/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/ANSES-Ploufragan/vvv2_display", "url": "https://github.com/ANSES-Ploufragan/vvv2_display", "data": {"doi": "10.3390/v17101385", "name": "vvv2_display", "url": "https://github.com/ANSES-Ploufragan/vvv2_display", "full_name": "ANSES-Ploufragan/vvv2_display", "html_url": "https://github.com/ANSES-Ploufragan/vvv2_display", "description": "Create png file of variants proportions in an assembly/reference including CDS positions using output of vadr 1.5.1 (annotation) and vardict-java 1.8.3 (variant calling)", "created_at": "2022-05-19T09:07:13Z", "updated_at": "2026-02-11T17:33:21Z", "clone_url": "https://github.com/ANSES-Ploufragan/vvv2_display.git", "size": 5453, "stargazers_count": 1, "watchers_count": 1, "language": "Python", "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/ANSES-Ploufragan", "avatar_url": "https://avatars.githubusercontent.com/u/43985978?v=4", "login": "ANSES-Ploufragan", "type": "Organization"}, "topics": ["annotation", "bioinformatics", "display", "variant-calling", "virus"], "timestamp": "2026-02-15 01:12:45.223966", "avatar": "https://avatars.githubusercontent.com/u/43985978?v=4"}} diff --git a/docs/api/repos/github/AmeryGration/dyad/index.json b/docs/api/repos/github/AmeryGration/dyad/index.json new file mode 100644 index 000000000..f94fa6c77 --- /dev/null +++ b/docs/api/repos/github/AmeryGration/dyad/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/AmeryGration/dyad", "url": "https://github.com/AmeryGration/dyad", "data": {"doi": "https://doi.org/10.5281/zenodo.18561679", "name": "dyad", "url": "https://github.com/AmeryGration/dyad", "full_name": "AmeryGration/dyad", "html_url": "https://github.com/AmeryGration/dyad", "description": "Two-body dynamics and binary-star statistics.", "created_at": "2023-10-25T09:28:02Z", "updated_at": "2026-02-09T18:36:18Z", "clone_url": "https://github.com/AmeryGration/dyad.git", "size": 141956, "stargazers_count": 1, "watchers_count": 1, "language": "Python", "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/AmeryGration", "avatar_url": "https://avatars.githubusercontent.com/u/15691891?v=4", "login": "AmeryGration", "type": "User"}, "timestamp": "2026-02-15 01:12:26.015721", "avatar": "https://avatars.githubusercontent.com/u/15691891?v=4"}} diff --git a/docs/api/repos/github/KarchinLab/open-cravat-readthedocs/index.json b/docs/api/repos/github/KarchinLab/open-cravat-readthedocs/index.json new file mode 100644 index 000000000..02a92adad --- /dev/null +++ b/docs/api/repos/github/KarchinLab/open-cravat-readthedocs/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/KarchinLab/open-cravat-readthedocs", "url": "https://github.com/KarchinLab/open-cravat-readthedocs", "data": {"doi": "10.1200/cci.19.00132", "name": "open-cravat-readthedocs", "url": "https://github.com/KarchinLab/open-cravat-readthedocs", "full_name": "KarchinLab/open-cravat-readthedocs", "html_url": "https://github.com/KarchinLab/open-cravat-readthedocs", "created_at": "2020-12-23T16:50:42Z", "updated_at": "2025-08-11T17:50:13Z", "clone_url": "https://github.com/KarchinLab/open-cravat-readthedocs.git", "size": 32915, "stargazers_count": 1, "watchers_count": 1, "language": "Python", "open_issues_count": 2, "subscribers_count": 10, "owner": {"html_url": "https://github.com/KarchinLab", "avatar_url": "https://avatars.githubusercontent.com/u/12953773?v=4", "login": "KarchinLab", "type": "Organization"}, "timestamp": "2026-02-15 01:12:47.649691", "avatar": "https://avatars.githubusercontent.com/u/12953773?v=4"}} diff --git a/docs/api/repos/github/QTC-UMD/rydiqule/index.json b/docs/api/repos/github/QTC-UMD/rydiqule/index.json new file mode 100644 index 000000000..c06959d90 --- /dev/null +++ b/docs/api/repos/github/QTC-UMD/rydiqule/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/QTC-UMD/rydiqule", "url": "https://github.com/QTC-UMD/rydiqule", "data": {"doi": "https://doi.org/10.5281/zenodo.18341352", "name": "rydiqule", "url": "https://github.com/QTC-UMD/rydiqule", "full_name": "QTC-UMD/rydiqule", "html_url": "https://github.com/QTC-UMD/rydiqule", "description": "Rydberg Sensor Interactive Quantum Physics Module", "created_at": "2023-05-07T15:13:01Z", "updated_at": "2026-01-22T14:31:43Z", "clone_url": "https://github.com/QTC-UMD/rydiqule.git", "homepage": "https://rydiqule.readthedocs.io/", "size": 6931, "stargazers_count": 25, "watchers_count": 25, "language": "Python", "open_issues_count": 10, "license": {"key": "apache-2.0", "name": "Apache License 2.0", "spdx_id": "Apache-2.0", "url": "https://api.github.com/licenses/apache-2.0", "node_id": "MDc6TGljZW5zZTI="}, "subscribers_count": 2, "owner": {"html_url": "https://github.com/QTC-UMD", "avatar_url": "https://avatars.githubusercontent.com/u/126897874?v=4", "login": "QTC-UMD", "type": "Organization"}, "topics": ["atomic-physics", "atomic-sensors", "electrometry", "quantum-optics", "rydberg"], "timestamp": "2026-02-15 01:12:26.812320", "avatar": "https://avatars.githubusercontent.com/u/126897874?v=4"}} diff --git a/docs/api/repos/github/SAIL-Labs/PIRATES/index.json b/docs/api/repos/github/SAIL-Labs/PIRATES/index.json new file mode 100644 index 000000000..677e8b93a --- /dev/null +++ b/docs/api/repos/github/SAIL-Labs/PIRATES/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/SAIL-Labs/PIRATES", "url": "https://github.com/SAIL-Labs/PIRATES", "data": {"doi": ["https://ui.adsabs.harvard.edu/abs/2025arXiv250511950L", "https://ui.adsabs.harvard.edu/abs/2025ascl.soft07029L/abstract"], "title": "PIRATES: Polarimetric Image Reconstruction AI for Tracing Evolved Structures", "url": "https://github.com/SAIL-Labs/PIRATES", "name": "PIRATES", "full_name": "SAIL-Labs/PIRATES", "html_url": "https://github.com/SAIL-Labs/PIRATES", "description": "Code for the PIRATES image reconstruction paper", "created_at": "2025-11-23T23:15:13Z", "updated_at": "2025-11-24T03:53:25Z", "clone_url": "https://github.com/SAIL-Labs/PIRATES.git", "size": 54, "stargazers_count": 2, "watchers_count": 2, "language": "Python", "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "owner": {"html_url": "https://github.com/SAIL-Labs", "avatar_url": "https://avatars.githubusercontent.com/u/19316639?v=4", "login": "SAIL-Labs", "type": "Organization"}, "timestamp": "2026-02-15 01:12:06.803225", "avatar": "https://avatars.githubusercontent.com/u/19316639?v=4"}} diff --git a/docs/api/repos/github/VirtualPhotonics/MieSimulatorGUI/index.json b/docs/api/repos/github/VirtualPhotonics/MieSimulatorGUI/index.json new file mode 100644 index 000000000..45f461a85 --- /dev/null +++ b/docs/api/repos/github/VirtualPhotonics/MieSimulatorGUI/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/VirtualPhotonics/MieSimulatorGUI", "url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", "data": {"doi": "https://doi.org/10.5281/zenodo.18462320", "name": "MieSimulatorGUI", "url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", "full_name": "VirtualPhotonics/MieSimulatorGUI", "html_url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", "description": "Mie Simulator GUI", "created_at": "2017-07-07T17:21:38Z", "updated_at": "2026-02-12T21:33:01Z", "clone_url": "https://github.com/VirtualPhotonics/MieSimulatorGUI.git", "size": 13926, "stargazers_count": 28, "watchers_count": 28, "language": "C++", "license": {"key": "mit", "name": "MIT License", "spdx_id": "MIT", "url": "https://api.github.com/licenses/mit", "node_id": "MDc6TGljZW5zZTEz"}, "subscribers_count": 3, "owner": {"html_url": "https://github.com/VirtualPhotonics", "avatar_url": "https://avatars.githubusercontent.com/u/26932731?v=4", "login": "VirtualPhotonics", "type": "Organization"}, "timestamp": "2026-02-15 01:12:26.406609", "avatar": "https://avatars.githubusercontent.com/u/26932731?v=4"}} diff --git a/docs/api/repos/github/baharmon/r.earthworks/index.json b/docs/api/repos/github/baharmon/r.earthworks/index.json new file mode 100644 index 000000000..12abae95a --- /dev/null +++ b/docs/api/repos/github/baharmon/r.earthworks/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/baharmon/r.earthworks", "url": "https://github.com/baharmon/r.earthworks", "data": {"doi": "https://doi.org/10.5281/zenodo.18407200", "name": "r.earthworks", "url": "https://github.com/baharmon/r.earthworks", "full_name": "baharmon/r.earthworks", "html_url": "https://github.com/baharmon/r.earthworks", "description": "A terrain modeling tool for the GRASS geocomputation engine", "created_at": "2024-10-07T19:42:52Z", "updated_at": "2026-02-13T17:03:37Z", "clone_url": "https://github.com/baharmon/r.earthworks.git", "homepage": "https://grass.osgeo.org/grass85/manuals/addons/r.earthworks.html", "size": 14692, "stargazers_count": 1, "watchers_count": 1, "language": "Jupyter Notebook", "open_issues_count": 4, "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/baharmon", "avatar_url": "https://avatars.githubusercontent.com/u/10392927?v=4", "login": "baharmon", "type": "User"}, "topics": ["earthworks", "terrain", "grass-gis"], "timestamp": "2026-02-15 01:12:24.977748", "avatar": "https://avatars.githubusercontent.com/u/10392927?v=4"}} diff --git a/docs/api/repos/github/c5shen/TIPP3/index.json b/docs/api/repos/github/c5shen/TIPP3/index.json new file mode 100644 index 000000000..1e4c73b62 --- /dev/null +++ b/docs/api/repos/github/c5shen/TIPP3/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/c5shen/TIPP3", "url": "https://github.com/c5shen/TIPP3", "data": {"doi": "10.1371/journal.pcbi.1012593", "name": "TIPP3", "url": "https://github.com/c5shen/TIPP3", "full_name": "c5shen/TIPP3", "html_url": "https://github.com/c5shen/TIPP3", "description": "TIPP3 and TIPP3-fast: new phylogeny-based metagenomic profiling and taxonomic identification tool.", "created_at": "2022-11-22T17:51:42Z", "updated_at": "2025-12-15T18:43:42Z", "clone_url": "https://github.com/c5shen/TIPP3.git", "size": 64616, "stargazers_count": 3, "watchers_count": 3, "language": "Java", "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/c5shen", "avatar_url": "https://avatars.githubusercontent.com/u/19351031?v=4", "login": "c5shen", "type": "User"}, "timestamp": "2026-02-15 01:12:46.445061", "avatar": "https://avatars.githubusercontent.com/u/19351031?v=4"}} diff --git a/docs/api/repos/github/dalipconstant/dalip-estimator/index.json b/docs/api/repos/github/dalipconstant/dalip-estimator/index.json new file mode 100644 index 000000000..0de586424 --- /dev/null +++ b/docs/api/repos/github/dalipconstant/dalip-estimator/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/dalipconstant/dalip-estimator", "url": "https://github.com/dalipconstant/dalip-estimator", "data": {"doi": [], "title": "dalip-estimator: Empirical gravitational acceleration estimator from lensing observables", "url": "https://github.com/dalipconstant/dalip-estimator", "name": "dalip-estimator", "full_name": "dalipconstant/dalip-estimator", "html_url": "https://github.com/dalipconstant/dalip-estimator", "description": "Empirical gravitational acceleration estimator from lensing observables", "created_at": "2026-01-31T18:31:52Z", "updated_at": "2026-02-11T18:29:16Z", "clone_url": "https://github.com/dalipconstant/dalip-estimator.git", "size": 725, "language": "TeX", "license": {"key": "mit", "name": "MIT License", "spdx_id": "MIT", "url": "https://api.github.com/licenses/mit", "node_id": "MDc6TGljZW5zZTEz"}, "owner": {"html_url": "https://github.com/dalipconstant", "avatar_url": "https://avatars.githubusercontent.com/u/232784211?v=4", "login": "dalipconstant", "type": "User"}, "timestamp": "2026-02-15 01:12:05.566005", "avatar": "https://avatars.githubusercontent.com/u/232784211?v=4"}} diff --git a/docs/api/repos/github/florianfranz/topo_chronia/index.json b/docs/api/repos/github/florianfranz/topo_chronia/index.json new file mode 100644 index 000000000..7662109ad --- /dev/null +++ b/docs/api/repos/github/florianfranz/topo_chronia/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/florianfranz/topo_chronia", "url": "https://github.com/florianfranz/topo_chronia", "data": {"doi": "https://doi.org/10.5281/zenodo.18623621", "name": "topo_chronia", "url": "https://github.com/florianfranz/topo_chronia", "full_name": "florianfranz/topo_chronia", "html_url": "https://github.com/florianfranz/topo_chronia", "description": "TopoChronia: A QGIS plugin for the creation of fully quantified palaeogeographic maps", "created_at": "2025-01-22T16:10:35Z", "updated_at": "2026-02-13T07:39:44Z", "clone_url": "https://github.com/florianfranz/topo_chronia.git", "homepage": "https://topo-chronia.readthedocs.io/en/latest/", "size": 205937, "stargazers_count": 9, "watchers_count": 9, "language": "Python", "open_issues_count": 1, "license": {"key": "other", "name": "Other", "spdx_id": "NOASSERTION", "url": null, "node_id": "MDc6TGljZW5zZTA="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/florianfranz", "avatar_url": "https://avatars.githubusercontent.com/u/42937007?v=4", "login": "florianfranz", "type": "User"}, "topics": ["palaeogeography", "tectonics", "palaeotopography", "panalesis", "palaeoclimate", "plate-tectonics", "qgis", "qgis-plugin"], "timestamp": "2026-02-15 01:12:24.282285", "avatar": "https://avatars.githubusercontent.com/u/42937007?v=4"}} diff --git a/docs/api/repos/github/hamidnpc/Neloura/index.json b/docs/api/repos/github/hamidnpc/Neloura/index.json new file mode 100644 index 000000000..bb81e09f0 --- /dev/null +++ b/docs/api/repos/github/hamidnpc/Neloura/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/hamidnpc/Neloura", "url": "https://github.com/hamidnpc/Neloura", "data": {"doi": [], "title": "Neloura", "url": "https://github.com/hamidnpc/Neloura", "name": "Neloura", "full_name": "hamidnpc/Neloura", "html_url": "https://github.com/hamidnpc/Neloura", "description": "FITS File Visualization, Cataloging, and Interaction Tool", "created_at": "2025-02-12T10:50:27Z", "updated_at": "2026-02-11T20:27:46Z", "clone_url": "https://github.com/hamidnpc/Neloura.git", "homepage": "https://neloura.com", "size": 39042, "stargazers_count": 4, "watchers_count": 4, "language": "JavaScript", "license": {"key": "bsd-3-clause", "name": "BSD 3-Clause \"New\" or \"Revised\" License", "spdx_id": "BSD-3-Clause", "url": "https://api.github.com/licenses/bsd-3-clause", "node_id": "MDc6TGljZW5zZTU="}, "subscribers_count": 2, "owner": {"html_url": "https://github.com/hamidnpc", "avatar_url": "https://avatars.githubusercontent.com/u/3179916?v=4", "login": "hamidnpc", "type": "User"}, "topics": ["astronomy"], "timestamp": "2026-02-15 01:12:06.145002", "avatar": "https://avatars.githubusercontent.com/u/3179916?v=4"}} diff --git a/docs/api/repos/github/karlropkins/AQEval/index.json b/docs/api/repos/github/karlropkins/AQEval/index.json new file mode 100644 index 000000000..f7adae313 --- /dev/null +++ b/docs/api/repos/github/karlropkins/AQEval/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/karlropkins/AQEval", "url": "https://github.com/karlropkins/AQEval", "data": {"doi": "https://doi.org/10.5281/zenodo.18440452", "name": "AQEval", "url": "https://github.com/karlropkins/AQEval", "full_name": "karlropkins/AQEval", "html_url": "https://github.com/karlropkins/AQEval", "description": "R code for Air Quality Evaluation ", "created_at": "2022-03-18T07:51:55Z", "updated_at": "2026-02-12T11:56:14Z", "clone_url": "https://github.com/karlropkins/AQEval.git", "homepage": "https://karlropkins.github.io/AQEval/", "size": 24463, "stargazers_count": 10, "watchers_count": 10, "language": "R", "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 2, "owner": {"html_url": "https://github.com/karlropkins", "avatar_url": "https://avatars.githubusercontent.com/u/22469070?v=4", "login": "karlropkins", "type": "User"}, "timestamp": "2026-02-15 01:12:24.637419", "avatar": "https://avatars.githubusercontent.com/u/22469070?v=4"}} diff --git a/docs/api/repos/github/motu-tool/mOTUs/index.json b/docs/api/repos/github/motu-tool/mOTUs/index.json new file mode 100644 index 000000000..86c5e4598 --- /dev/null +++ b/docs/api/repos/github/motu-tool/mOTUs/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/motu-tool/mOTUs", "url": "https://github.com/motu-tool/mOTUs", "data": {"doi": "10.1093/nar/gkae1004", "name": "mOTUs", "url": "https://github.com/motu-tool/mOTUs", "full_name": "motu-tool/mOTUs", "html_url": "https://github.com/motu-tool/mOTUs", "description": "motus - a tool for marker gene-based OTU (mOTU) profiling", "created_at": "2018-03-23T14:26:35Z", "updated_at": "2026-02-11T12:26:35Z", "clone_url": "https://github.com/motu-tool/mOTUs.git", "size": 1864, "stargazers_count": 169, "watchers_count": 169, "language": "Python", "open_issues_count": 8, "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 10, "owner": {"html_url": "https://github.com/motu-tool", "avatar_url": "https://avatars.githubusercontent.com/u/37665514?v=4", "login": "motu-tool", "type": "Organization"}, "timestamp": "2026-02-15 01:12:45.579380", "avatar": "https://avatars.githubusercontent.com/u/37665514?v=4"}} diff --git a/docs/api/repos/github/ncas-cms/pyfive/index.json b/docs/api/repos/github/ncas-cms/pyfive/index.json new file mode 100644 index 000000000..958358f60 --- /dev/null +++ b/docs/api/repos/github/ncas-cms/pyfive/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/ncas-cms/pyfive", "url": "https://github.com/NCAS-CMS/pyfive", "data": {"doi": "https://doi.org/10.5281/zenodo.18599472", "name": "pyfive", "url": "https://github.com/NCAS-CMS/pyfive", "full_name": "NCAS-CMS/pyfive", "html_url": "https://github.com/NCAS-CMS/pyfive", "description": "A pure Python HDF5 file reader", "created_at": "2016-05-02T02:45:59Z", "updated_at": "2026-02-13T17:21:19Z", "clone_url": "https://github.com/NCAS-CMS/pyfive.git", "homepage": "https://pyfive.readthedocs.io", "size": 2646, "stargazers_count": 100, "watchers_count": 100, "language": "Python", "open_issues_count": 10, "license": {"key": "bsd-3-clause", "name": "BSD 3-Clause \"New\" or \"Revised\" License", "spdx_id": "BSD-3-Clause", "url": "https://api.github.com/licenses/bsd-3-clause", "node_id": "MDc6TGljZW5zZTU="}, "subscribers_count": 9, "owner": {"html_url": "https://github.com/NCAS-CMS", "avatar_url": "https://avatars.githubusercontent.com/u/31280705?v=4", "login": "NCAS-CMS", "type": "Organization"}, "timestamp": "2026-02-15 01:12:25.584486", "avatar": "https://avatars.githubusercontent.com/u/31280705?v=4"}} diff --git a/docs/api/repos/github/nvnsudharsan/SOLWEIG-GPU/index.json b/docs/api/repos/github/nvnsudharsan/SOLWEIG-GPU/index.json new file mode 100644 index 000000000..c6912df8e --- /dev/null +++ b/docs/api/repos/github/nvnsudharsan/SOLWEIG-GPU/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/nvnsudharsan/SOLWEIG-GPU", "url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", "data": {"doi": "https://doi.org/10.5281/zenodo.17048977", "name": "SOLWEIG-GPU", "url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", "full_name": "nvnsudharsan/SOLWEIG-GPU", "html_url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", "description": "SOLWEIG-GPU is a Python package and command-line interface for running the SOLWEIG (Solar and LongWave Environmental Irradiance Geometry) model on CPU or GPU (if available).", "created_at": "2025-04-03T06:03:00Z", "updated_at": "2026-02-09T20:28:47Z", "clone_url": "https://github.com/nvnsudharsan/SOLWEIG-GPU.git", "size": 37249, "stargazers_count": 15, "watchers_count": 15, "language": "Python", "open_issues_count": 2, "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 2, "owner": {"html_url": "https://github.com/nvnsudharsan", "avatar_url": "https://avatars.githubusercontent.com/u/57706774?v=4", "login": "nvnsudharsan", "type": "User"}, "timestamp": "2026-02-15 01:12:23.788858", "avatar": "https://avatars.githubusercontent.com/u/57706774?v=4"}} diff --git a/docs/api/repos/github/pirovc/ganon_benchmark/index.json b/docs/api/repos/github/pirovc/ganon_benchmark/index.json new file mode 100644 index 000000000..c837da5e7 --- /dev/null +++ b/docs/api/repos/github/pirovc/ganon_benchmark/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/pirovc/ganon_benchmark", "url": "https://github.com/pirovc/ganon_benchmark", "data": {"doi": "10.1093/nargab/lqaf094", "name": "ganon_benchmark", "url": "https://github.com/pirovc/ganon_benchmark", "full_name": "pirovc/ganon_benchmark", "html_url": "https://github.com/pirovc/ganon_benchmark", "description": "benchmarking scripts for ganon", "created_at": "2019-07-10T14:35:14Z", "updated_at": "2020-08-08T05:10:11Z", "clone_url": "https://github.com/pirovc/ganon_benchmark.git", "size": 397241, "stargazers_count": 1, "watchers_count": 1, "language": "Python", "license": {"key": "mit", "name": "MIT License", "spdx_id": "MIT", "url": "https://api.github.com/licenses/mit", "node_id": "MDc6TGljZW5zZTEz"}, "owner": {"html_url": "https://github.com/pirovc", "avatar_url": "https://avatars.githubusercontent.com/u/4673375?v=4", "login": "pirovc", "type": "User"}, "timestamp": "2026-02-15 01:12:47.280215", "avatar": "https://avatars.githubusercontent.com/u/4673375?v=4"}} diff --git a/docs/api/repos/github/rmpiro/decompTumor2Sig/index.json b/docs/api/repos/github/rmpiro/decompTumor2Sig/index.json new file mode 100644 index 000000000..87efc503d --- /dev/null +++ b/docs/api/repos/github/rmpiro/decompTumor2Sig/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/rmpiro/decompTumor2Sig", "url": "https://github.com/rmpiro/decompTumor2Sig", "data": {"doi": "10.1186/s12859-019-2688-6", "name": "decompTumor2Sig", "url": "https://github.com/rmpiro/decompTumor2Sig", "full_name": "rmpiro/decompTumor2Sig", "html_url": "https://github.com/rmpiro/decompTumor2Sig", "description": "decompTumor2Sig - Decomposition of individual tumors into mutational signatures", "created_at": "2018-07-27T01:49:44Z", "updated_at": "2022-07-24T12:38:00Z", "clone_url": "https://github.com/rmpiro/decompTumor2Sig.git", "size": 5913, "stargazers_count": 1, "watchers_count": 1, "language": "R", "open_issues_count": 1, "subscribers_count": 1, "owner": {"html_url": "https://github.com/rmpiro", "avatar_url": "https://avatars.githubusercontent.com/u/24794272?v=4", "login": "rmpiro", "type": "User"}, "timestamp": "2026-02-15 01:12:47.997913", "avatar": "https://avatars.githubusercontent.com/u/24794272?v=4"}} diff --git a/docs/api/repos/github/ropensci/c3dr/index.json b/docs/api/repos/github/ropensci/c3dr/index.json new file mode 100644 index 000000000..af394cef9 --- /dev/null +++ b/docs/api/repos/github/ropensci/c3dr/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/ropensci/c3dr", "url": "https://github.com/ropensci/c3dr", "data": {"doi": "https://doi.org/10.5281/zenodo.16919595", "name": "c3dr", "url": "https://github.com/ropensci/c3dr", "full_name": "ropensci/c3dr", "html_url": "https://github.com/ropensci/c3dr", "description": "Read and write C3D motion capture data in R", "created_at": "2024-07-12T21:17:33Z", "updated_at": "2025-10-17T20:42:51Z", "clone_url": "https://github.com/ropensci/c3dr.git", "homepage": "https://docs.ropensci.org/c3dr/", "size": 2573, "stargazers_count": 4, "watchers_count": 4, "language": "C++", "license": {"key": "other", "name": "Other", "spdx_id": "NOASSERTION", "url": null, "node_id": "MDc6TGljZW5zZTA="}, "subscribers_count": 2, "owner": {"html_url": "https://github.com/ropensci", "avatar_url": "https://avatars.githubusercontent.com/u/1200269?v=4", "login": "ropensci", "type": "Organization"}, "topics": ["r", "r-package", "r-stats"], "timestamp": "2026-02-15 01:12:27.266483", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4"}} diff --git a/docs/api/repos/github/showteeth/GEfetch2R/index.json b/docs/api/repos/github/showteeth/GEfetch2R/index.json new file mode 100644 index 000000000..5998e7eb0 --- /dev/null +++ b/docs/api/repos/github/showteeth/GEfetch2R/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/showteeth/GEfetch2R", "url": "https://github.com/showteeth/GEfetch2R", "data": {"name": "GEfetch2R", "url": "https://github.com/showteeth/GEfetch2R", "full_name": "showteeth/GEfetch2R", "html_url": "https://github.com/showteeth/GEfetch2R", "private": false, "description": "GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools", "created_at": "2023-07-12T06:00:56Z", "updated_at": "2026-02-11T13:02:17Z", "clone_url": "https://github.com/showteeth/GEfetch2R.git", "homepage": "https://showteeth.github.io/GEfetch2R/", "size": 41784, "stargazers_count": 39, "watchers_count": 39, "language": "R", "open_issues_count": 0, "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/showteeth", "avatar_url": "https://avatars.githubusercontent.com/u/43517166?v=4", "login": "showteeth", "type": "User"}, "topics": ["geo", "single-cell-rna-seq", "zenodo", "panglaodb", "ucsc-cell-browser", "bam", "fastq", "format-conversion-tool", "human-cell-atlas", "sra", "cellxgene"], "timestamp": "2026-02-15 01:12:46.915423", "avatar": "https://avatars.githubusercontent.com/u/43517166?v=4"}} diff --git a/docs/api/repos/github/steineggerlab/Metabuli/index.json b/docs/api/repos/github/steineggerlab/Metabuli/index.json new file mode 100644 index 000000000..3dbdda50d --- /dev/null +++ b/docs/api/repos/github/steineggerlab/Metabuli/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/steineggerlab/Metabuli", "url": "https://github.com/steineggerlab/Metabuli", "data": {"doi": "10.1038/s41592-024-02273-y", "name": "Metabuli", "url": "https://github.com/steineggerlab/Metabuli", "full_name": "steineggerlab/Metabuli", "html_url": "https://github.com/steineggerlab/Metabuli", "description": "Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.", "created_at": "2020-09-09T05:04:49Z", "updated_at": "2026-02-12T05:38:08Z", "clone_url": "https://github.com/steineggerlab/Metabuli.git", "size": 97369, "stargazers_count": 166, "watchers_count": 166, "language": "C++", "open_issues_count": 33, "license": {"key": "gpl-3.0", "name": "GNU General Public License v3.0", "spdx_id": "GPL-3.0", "url": "https://api.github.com/licenses/gpl-3.0", "node_id": "MDc6TGljZW5zZTk="}, "subscribers_count": 8, "owner": {"html_url": "https://github.com/steineggerlab", "avatar_url": "https://avatars.githubusercontent.com/u/62094016?v=4", "login": "steineggerlab", "type": "Organization"}, "topics": ["bioinformatics", "k-mer", "metagenomics", "taxonomic-classification", "taxonomy"], "timestamp": "2026-02-15 01:12:46.082522", "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4"}} diff --git a/docs/api/repos/github/subhk/BiGSTARS.jl/index.json b/docs/api/repos/github/subhk/BiGSTARS.jl/index.json new file mode 100644 index 000000000..5931f63c4 --- /dev/null +++ b/docs/api/repos/github/subhk/BiGSTARS.jl/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/subhk/BiGSTARS.jl", "url": "https://github.com/subhk/BiGSTARS.jl", "data": {"doi": "https://doi.org/10.5281/zenodo.18385010", "name": "BiGSTARS.jl", "url": "https://github.com/subhk/BiGSTARS.jl", "full_name": "subhk/BiGSTARS.jl", "html_url": "https://github.com/subhk/BiGSTARS.jl", "description": "A Julia toolkit for bi-global linear stability analysis for geophysical flows using Chebyshev-Fourier spectral collocation method.", "created_at": "2025-05-22T13:36:40Z", "updated_at": "2026-02-13T16:34:41Z", "clone_url": "https://github.com/subhk/BiGSTARS.jl.git", "homepage": "https://subhk.github.io/BiGSTARSDocumentation/stable/", "size": 15925, "stargazers_count": 3, "watchers_count": 3, "language": "Julia", "license": {"key": "mit", "name": "MIT License", "spdx_id": "MIT", "url": "https://api.github.com/licenses/mit", "node_id": "MDc6TGljZW5zZTEz"}, "subscribers_count": 1, "owner": {"html_url": "https://github.com/subhk", "avatar_url": "https://avatars.githubusercontent.com/u/13347479?v=4", "login": "subhk", "type": "User"}, "timestamp": "2026-02-15 01:12:23.455214", "avatar": "https://avatars.githubusercontent.com/u/13347479?v=4"}} diff --git a/docs/api/repos/github/yuhaoran/CUBE2/index.json b/docs/api/repos/github/yuhaoran/CUBE2/index.json new file mode 100644 index 000000000..930a041ab --- /dev/null +++ b/docs/api/repos/github/yuhaoran/CUBE2/index.json @@ -0,0 +1 @@ +{"parser": "github", "uid": "github/yuhaoran/CUBE2", "url": "https://github.com/yuhaoran/CUBE2", "data": {"doi": [], "title": "CUBE2: A cosmological N-body simulation code optimized for scalability, accuracy, and memory efficiency.", "url": "https://github.com/yuhaoran/CUBE2", "name": "CUBE2", "full_name": "yuhaoran/CUBE2", "html_url": "https://github.com/yuhaoran/CUBE2", "description": "CUBE2 is a open souree cosmological N-body code emphasizing memory e\ufb03ciency, com- putational performance, scalability and precision", "created_at": "2026-01-16T13:51:04Z", "updated_at": "2026-01-19T14:42:11Z", "clone_url": "https://github.com/yuhaoran/CUBE2.git", "size": 150, "language": "Fortran", "owner": {"html_url": "https://github.com/yuhaoran", "avatar_url": "https://avatars.githubusercontent.com/u/6211228?v=4", "login": "yuhaoran", "type": "User"}, "timestamp": "2026-02-15 01:12:05.215098", "avatar": "https://avatars.githubusercontent.com/u/6211228?v=4"}} diff --git a/docs/api/repos/gitlab/David_Haegele/line_racer/index.json b/docs/api/repos/gitlab/David_Haegele/line_racer/index.json new file mode 100644 index 000000000..79387ae6a --- /dev/null +++ b/docs/api/repos/gitlab/David_Haegele/line_racer/index.json @@ -0,0 +1 @@ +{"parser": "gitlab", "uid": "gitlab/David_Haegele/line_racer", "url": "https://gitlab.com/David_Haegele/line_racer", "data": {"doi": [], "title": "line racer: Rapid Calculation of Exoplanetary Radiative Opacities", "url": "https://gitlab.com/David_Haegele/line_racer", "id": 76227706, "name": "line_racer", "name_with_namespace": "David H\u00e4gele / line_racer", "path": "line_racer", "path_with_namespace": "David_Haegele/line_racer", "created_at": "2025-11-20T08:56:31.563Z", "default_branch": "main", "ssh_url_to_repo": "git@gitlab.com:David_Haegele/line_racer.git", "http_url_to_repo": "https://gitlab.com/David_Haegele/line_racer.git", "web_url": "https://gitlab.com/David_Haegele/line_racer", "readme_url": "https://gitlab.com/David_Haegele/line_racer/-/blob/main/README.rst", "last_activity_at": "2026-02-12T13:52:42.643Z", "visibility": "public", "namespace": {"id": 59733380, "name": "David H\u00e4gele", "path": "David_Haegele", "kind": "user", "full_path": "David_Haegele", "parent_id": null, "avatar_url": "https://secure.gravatar.com/avatar/f50ab1b20cfba6857837d86eed330caa66942ac5f66553037b71c40c661ac3e0?s=80&d=identicon", "web_url": "https://gitlab.com/David_Haegele"}, "timestamp": "2026-02-15 01:12:05.769788", "avatar": "https://gitlab.comhttps://secure.gravatar.com/avatar/f50ab1b20cfba6857837d86eed330caa66942ac5f66553037b71c40c661ac3e0?s=80&d=identicon"}} diff --git a/docs/api/repos/gitlab/micromorph/ratel/index.json b/docs/api/repos/gitlab/micromorph/ratel/index.json new file mode 100644 index 000000000..76db4a210 --- /dev/null +++ b/docs/api/repos/gitlab/micromorph/ratel/index.json @@ -0,0 +1 @@ +{"parser": "gitlab", "uid": "gitlab/micromorph/ratel", "url": "https://gitlab.com/micromorph/ratel", "data": {"doi": "https://doi.org/10.5281/zenodo.18509304", "id": 29759477, "description": "Extensible, performance-portable solid mechanics with libCEED and PETSc", "name": "Ratel", "name_with_namespace": "micromorph / Ratel", "path": "ratel", "path_with_namespace": "micromorph/ratel", "created_at": "2021-09-20T19:02:14.059Z", "default_branch": "main", "tag_list": ["elasticity", "finite elements", "libceed", "matrix-free", "petsc", "solid mechanics"], "topics": ["elasticity", "finite elements", "libceed", "matrix-free", "petsc", "solid mechanics"], "ssh_url_to_repo": "git@gitlab.com:micromorph/ratel.git", "http_url_to_repo": "https://gitlab.com/micromorph/ratel.git", "web_url": "https://gitlab.com/micromorph/ratel", "readme_url": "https://gitlab.com/micromorph/ratel/-/blob/main/README.md", "forks_count": 10, "avatar_url": "https://gitlab.com/uploads/-/system/project/avatar/29759477/Ratellogo.png", "star_count": 10, "last_activity_at": "2026-02-13T14:38:01.330Z", "visibility": "public", "namespace": {"id": 7715281, "name": "micromorph", "path": "micromorph", "kind": "group", "full_path": "micromorph", "parent_id": null, "avatar_url": null, "web_url": "https://gitlab.com/groups/micromorph"}, "timestamp": "2026-02-15 01:12:25.183599", "avatar": "https://gitlab.com/uploads/-/system/project/avatar/29759477/Ratellogo.png", "url": "https://gitlab.com/micromorph/ratel"}} diff --git a/docs/api/repos/index.json b/docs/api/repos/index.json index 98d534f3a..708f5b2bd 100644 --- a/docs/api/repos/index.json +++ b/docs/api/repos/index.json @@ -1 +1 @@ -[{"uid": "gitlab/cirad-apps/phylostems", "html_url": "https://rseng.github.io/software/repository/gitlab/cirad-apps/phylostems", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cirad-apps/phylostems"}, {"uid": "gitlab/mcfuman/SpectraPy", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfuman/SpectraPy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfuman/SpectraPy"}, {"uid": "gitlab/sissopp_developers/sissopp", "html_url": "https://rseng.github.io/software/repository/gitlab/sissopp_developers/sissopp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sissopp_developers/sissopp"}, {"uid": "gitlab/dglaeser/fieldcompare", "html_url": "https://rseng.github.io/software/repository/gitlab/dglaeser/fieldcompare", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dglaeser/fieldcompare"}, {"uid": "gitlab/chiemotono/mdcontactcom", "html_url": "https://rseng.github.io/software/repository/gitlab/chiemotono/mdcontactcom", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chiemotono/mdcontactcom"}, {"uid": "gitlab/andreas.andrusch/paipline", "html_url": "https://rseng.github.io/software/repository/gitlab/andreas.andrusch/paipline", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andreas.andrusch/paipline"}, {"uid": "gitlab/paulklemm_PHD/proteinortho", "html_url": "https://rseng.github.io/software/repository/gitlab/paulklemm_PHD/proteinortho", "api_url": "https://rseng.github.io/software/api/repos/gitlab/paulklemm_PHD/proteinortho"}, {"uid": "gitlab/rahmannlab/episegmix", "html_url": "https://rseng.github.io/software/repository/gitlab/rahmannlab/episegmix", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rahmannlab/episegmix"}, {"uid": "gitlab/cmbm-ethz/miop", "html_url": "https://rseng.github.io/software/repository/gitlab/cmbm-ethz/miop", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cmbm-ethz/miop"}, {"uid": "gitlab/chaver/choco-mining", "html_url": "https://rseng.github.io/software/repository/gitlab/chaver/choco-mining", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chaver/choco-mining"}, {"uid": "gitlab/remikz/nccmp", "html_url": "https://rseng.github.io/software/repository/gitlab/remikz/nccmp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remikz/nccmp"}, {"uid": "gitlab/moerman1/fhi-cc4s", "html_url": "https://rseng.github.io/software/repository/gitlab/moerman1/fhi-cc4s", "api_url": "https://rseng.github.io/software/api/repos/gitlab/moerman1/fhi-cc4s"}, {"uid": "gitlab/pvst/asi", "html_url": "https://rseng.github.io/software/repository/gitlab/pvst/asi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pvst/asi"}, {"uid": "gitlab/souvlaki/thalassa", "html_url": "https://rseng.github.io/software/repository/gitlab/souvlaki/thalassa", "api_url": "https://rseng.github.io/software/api/repos/gitlab/souvlaki/thalassa"}, {"uid": "gitlab/JuditGG/trumpetplots", "html_url": "https://rseng.github.io/software/repository/gitlab/JuditGG/trumpetplots", "api_url": "https://rseng.github.io/software/api/repos/gitlab/JuditGG/trumpetplots"}, {"uid": "gitlab/jerrytheo16/exoplanet", "html_url": "https://rseng.github.io/software/repository/gitlab/jerrytheo16/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jerrytheo16/exoplanet"}, {"uid": "gitlab/treangenlab/vulcan", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/vulcan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/vulcan"}, {"uid": "gitlab/treangenlab/emu", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/emu"}, {"uid": "gitlab/project-dare/dare-platform", "html_url": "https://rseng.github.io/software/repository/gitlab/project-dare/dare-platform", "api_url": "https://rseng.github.io/software/api/repos/gitlab/project-dare/dare-platform"}, {"uid": "gitlab/clairedavies/sedbys", "html_url": "https://rseng.github.io/software/repository/gitlab/clairedavies/sedbys", "api_url": "https://rseng.github.io/software/api/repos/gitlab/clairedavies/sedbys"}, {"uid": "gitlab/gims-developers/gims", "html_url": "https://rseng.github.io/software/repository/gitlab/gims-developers/gims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gims-developers/gims"}, {"uid": "gitlab/astron-idg/idg", "html_url": "https://rseng.github.io/software/repository/gitlab/astron-idg/idg", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astron-idg/idg"}, {"uid": "gitlab/jesseds/apav", "html_url": "https://rseng.github.io/software/repository/gitlab/jesseds/apav", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jesseds/apav"}, {"uid": "gitlab/pipe3d/pyPipe3D", "html_url": "https://rseng.github.io/software/repository/gitlab/pipe3d/pyPipe3D", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pipe3d/pyPipe3D"}, {"uid": "gitlab/geekysquirrel/bigx", "html_url": "https://rseng.github.io/software/repository/gitlab/geekysquirrel/bigx", "api_url": "https://rseng.github.io/software/api/repos/gitlab/geekysquirrel/bigx"}, {"uid": "gitlab/binary_c/binary_c-python", "html_url": "https://rseng.github.io/software/repository/gitlab/binary_c/binary_c-python", "api_url": "https://rseng.github.io/software/api/repos/gitlab/binary_c/binary_c-python"}, {"uid": "gitlab/jason-rumengan/pyarma", "html_url": "https://rseng.github.io/software/repository/gitlab/jason-rumengan/pyarma", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jason-rumengan/pyarma"}, {"uid": "gitlab/aroffringa/wsclean", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/wsclean", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/wsclean"}, {"uid": "gitlab/aroffringa/aoflagger", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/aoflagger", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/aoflagger"}, {"uid": "gitlab/open-darts/open-darts", "html_url": "https://rseng.github.io/software/repository/gitlab/open-darts/open-darts", "api_url": "https://rseng.github.io/software/api/repos/gitlab/open-darts/open-darts"}, {"uid": "gitlab/ffaucher/hawen", "html_url": "https://rseng.github.io/software/repository/gitlab/ffaucher/hawen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ffaucher/hawen"}, {"uid": "gitlab/groimp-plugins/Pointcloud", "html_url": "https://rseng.github.io/software/repository/gitlab/groimp-plugins/Pointcloud", "api_url": "https://rseng.github.io/software/api/repos/gitlab/groimp-plugins/Pointcloud"}, {"uid": "gitlab/casi-project/casi-2d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-2d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-2d"}, {"uid": "gitlab/casi-project/casi-3d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-3d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-3d"}, {"uid": "gitlab/aegge/comet-emu", "html_url": "https://rseng.github.io/software/repository/gitlab/aegge/comet-emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aegge/comet-emu"}, {"uid": "gitlab/mule-tools/package-x", "html_url": "https://rseng.github.io/software/repository/gitlab/mule-tools/package-x", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mule-tools/package-x"}, {"uid": "gitlab/elsi_project/elsi_interface", "html_url": "https://rseng.github.io/software/repository/gitlab/elsi_project/elsi_interface", "api_url": "https://rseng.github.io/software/api/repos/gitlab/elsi_project/elsi_interface"}, {"uid": "gitlab/leelamichaels/Omega", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Omega", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Omega"}, {"uid": "gitlab/leelamichaels/Elysium", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Elysium", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Elysium"}, {"uid": "gitlab/leelamichaels/Infinity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Infinity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Infinity"}, {"uid": "gitlab/leelamichaels/Tranquillity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Tranquillity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Tranquillity"}, {"uid": "gitlab/leelamichaels/Burning_Arrow", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Burning_Arrow", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Burning_Arrow"}, {"uid": "gitlab/joseaher/astroplotlib", "html_url": "https://rseng.github.io/software/repository/gitlab/joseaher/astroplotlib", "api_url": "https://rseng.github.io/software/api/repos/gitlab/joseaher/astroplotlib"}, {"uid": "gitlab/rki_bioinformatics/IDeFIX", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/IDeFIX", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/IDeFIX"}, {"uid": "gitlab/rki_bioinformatics/purple", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/purple", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/purple"}, {"uid": "gitlab/rki_bioinformatics/HiLive2", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/HiLive2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/HiLive2"}, {"uid": "gitlab/mobse/source-code", "html_url": "https://rseng.github.io/software/repository/gitlab/mobse/source-code", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mobse/source-code"}, {"uid": "gitlab/octopus-code/octopus", "html_url": "https://rseng.github.io/software/repository/gitlab/octopus-code/octopus", "api_url": "https://rseng.github.io/software/api/repos/gitlab/octopus-code/octopus"}, {"uid": "gitlab/etienne.behar/menura", "html_url": "https://rseng.github.io/software/repository/gitlab/etienne.behar/menura", "api_url": "https://rseng.github.io/software/api/repos/gitlab/etienne.behar/menura"}, {"uid": "gitlab/chjordan/sslf", "html_url": "https://rseng.github.io/software/repository/gitlab/chjordan/sslf", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chjordan/sslf"}, {"uid": "gitlab/fibreglass/pivc", "html_url": "https://rseng.github.io/software/repository/gitlab/fibreglass/pivc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fibreglass/pivc"}, {"uid": "gitlab/multigris/mgris", "html_url": "https://rseng.github.io/software/repository/gitlab/multigris/mgris", "api_url": "https://rseng.github.io/software/api/repos/gitlab/multigris/mgris"}, {"uid": "gitlab/mcfrith/lamassemble", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/lamassemble", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/lamassemble"}, {"uid": "gitlab/mcfrith/tantan", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/tantan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/tantan"}, {"uid": "gitlab/mcfrith/last", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/last", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/last"}, {"uid": "gitlab/mcfrith/paraclu", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/paraclu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/paraclu"}, {"uid": "gitlab/vibes-developers/vibes", "html_url": "https://rseng.github.io/software/repository/gitlab/vibes-developers/vibes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vibes-developers/vibes"}, {"uid": "gitlab/pythia-uq/pythia", "html_url": "https://rseng.github.io/software/repository/gitlab/pythia-uq/pythia", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pythia-uq/pythia"}, {"uid": "gitlab/materials-modeling/calorine", "html_url": "https://rseng.github.io/software/repository/gitlab/materials-modeling/calorine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/materials-modeling/calorine"}, {"uid": "gitlab/sybreton/apollinaire", "html_url": "https://rseng.github.io/software/repository/gitlab/sybreton/apollinaire", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sybreton/apollinaire"}, {"uid": "gitlab/cosmograil/starred", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/starred", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/starred"}, {"uid": "gitlab/cosmograil/PyCS3", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/PyCS3", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/PyCS3"}, {"uid": "gitlab/djsmithbham/cnearest", "html_url": "https://rseng.github.io/software/repository/gitlab/djsmithbham/cnearest", "api_url": "https://rseng.github.io/software/api/repos/gitlab/djsmithbham/cnearest"}, {"uid": "gitlab/metafundev/metafun", "html_url": "https://rseng.github.io/software/repository/gitlab/metafundev/metafun", "api_url": "https://rseng.github.io/software/api/repos/gitlab/metafundev/metafun"}, {"uid": "gitlab/medbio/disgenet2r", "html_url": "https://rseng.github.io/software/repository/gitlab/medbio/disgenet2r", "api_url": "https://rseng.github.io/software/api/repos/gitlab/medbio/disgenet2r"}, {"uid": "gitlab/cosapp/cosapp", "html_url": "https://rseng.github.io/software/repository/gitlab/cosapp/cosapp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosapp/cosapp"}, {"uid": "gitlab/mauricemolli/petitRADTRANS", "html_url": "https://rseng.github.io/software/repository/gitlab/mauricemolli/petitRADTRANS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mauricemolli/petitRADTRANS"}, {"uid": "gitlab/ChemBioHub/tpmap", "html_url": "https://rseng.github.io/software/repository/gitlab/ChemBioHub/tpmap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ChemBioHub/tpmap"}, {"uid": "gitlab/astrogal/slideParam", "html_url": "https://rseng.github.io/software/repository/gitlab/astrogal/slideParam", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astrogal/slideParam"}, {"uid": "gitlab/dalton/dalton", "html_url": "https://rseng.github.io/software/repository/gitlab/dalton/dalton", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dalton/dalton"}, {"uid": "gitlab/cracklet/cracklet", "html_url": "https://rseng.github.io/software/repository/gitlab/cracklet/cracklet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cracklet/cracklet"}, {"uid": "gitlab/petsc/petsc", "html_url": "https://rseng.github.io/software/repository/gitlab/petsc/petsc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/petsc/petsc"}, {"uid": "gitlab/thartwig/asloth", "html_url": "https://rseng.github.io/software/repository/gitlab/thartwig/asloth", "api_url": "https://rseng.github.io/software/api/repos/gitlab/thartwig/asloth"}, {"uid": "gitlab/german.tischler/libmaus2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/libmaus2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/libmaus2"}, {"uid": "gitlab/german.tischler/biobambam2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/biobambam2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/biobambam2"}, {"uid": "gitlab/mainlabwsu/bims", "html_url": "https://rseng.github.io/software/repository/gitlab/mainlabwsu/bims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mainlabwsu/bims"}, {"uid": "gitlab/cosmology-ethz/ufig", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmology-ethz/ufig", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmology-ethz/ufig"}, {"uid": "gitlab/ezlab/busco", "html_url": "https://rseng.github.io/software/repository/gitlab/ezlab/busco", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ezlab/busco"}, {"uid": "gitlab/kmrajwade/iqrm_apollo", "html_url": "https://rseng.github.io/software/repository/gitlab/kmrajwade/iqrm_apollo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/kmrajwade/iqrm_apollo"}, {"uid": "gitlab/sigcorr/sigcorr", "html_url": "https://rseng.github.io/software/repository/gitlab/sigcorr/sigcorr", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sigcorr/sigcorr"}, {"uid": "gitlab/ComputationalScience/idinn", "html_url": "https://rseng.github.io/software/repository/gitlab/ComputationalScience/idinn", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ComputationalScience/idinn"}, {"uid": "gitlab/loic.cg.rossi/pymiedap", "html_url": "https://rseng.github.io/software/repository/gitlab/loic.cg.rossi/pymiedap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/loic.cg.rossi/pymiedap"}, {"uid": "gitlab/davidwoodburn/r3f", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/r3f", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/r3f"}, {"uid": "gitlab/davidwoodburn/itrm", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/itrm", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/itrm"}, {"uid": "gitlab/AstroVian/bmarxiv", "html_url": "https://rseng.github.io/software/repository/gitlab/AstroVian/bmarxiv", "api_url": "https://rseng.github.io/software/api/repos/gitlab/AstroVian/bmarxiv"}, {"uid": "gitlab/vincent-sater/umigen", "html_url": "https://rseng.github.io/software/repository/gitlab/vincent-sater/umigen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vincent-sater/umigen"}, {"uid": "gitlab/ostrokach/proteinsolver", "html_url": "https://rseng.github.io/software/repository/gitlab/ostrokach/proteinsolver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ostrokach/proteinsolver"}, {"uid": "gitlab/RKIBioinformaticsPipelines/QCumber", "html_url": "https://rseng.github.io/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", "api_url": "https://rseng.github.io/software/api/repos/gitlab/RKIBioinformaticsPipelines/QCumber"}, {"uid": "gitlab/Molcas/OpenMolcas", "html_url": "https://rseng.github.io/software/repository/gitlab/Molcas/OpenMolcas", "api_url": "https://rseng.github.io/software/api/repos/gitlab/Molcas/OpenMolcas"}, {"uid": "gitlab/imoralc/malu-ifs-visualization-tool", "html_url": "https://rseng.github.io/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", "api_url": "https://rseng.github.io/software/api/repos/gitlab/imoralc/malu-ifs-visualization-tool"}, {"uid": "gitlab/remram44/taguette", "html_url": "https://rseng.github.io/software/repository/gitlab/remram44/taguette", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remram44/taguette"}, {"uid": "gitlab/davidtourigny/dynamic-fba", "html_url": "https://rseng.github.io/software/repository/gitlab/davidtourigny/dynamic-fba", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidtourigny/dynamic-fba"}, {"uid": "gitlab/ENKI-portal/ThermoCodegen", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoCodegen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoCodegen"}, {"uid": "gitlab/ENKI-portal/vaporock", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/vaporock", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/vaporock"}, {"uid": "gitlab/ENKI-portal/ThermoEngine", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoEngine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoEngine"}, {"uid": "gitlab/chrjan/seq-seq-pan", "html_url": "https://rseng.github.io/software/repository/gitlab/chrjan/seq-seq-pan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chrjan/seq-seq-pan"}, {"uid": "gitlab/bu_cnio/vulcanspot", "html_url": "https://rseng.github.io/software/repository/gitlab/bu_cnio/vulcanspot", "api_url": "https://rseng.github.io/software/api/repos/gitlab/bu_cnio/vulcanspot"}, {"uid": "gitlab/BioimageInformaticsGroup/openphi", "html_url": "https://rseng.github.io/software/repository/gitlab/BioimageInformaticsGroup/openphi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/BioimageInformaticsGroup/openphi"}, {"uid": "gitlab/robizzard/libcdict", "html_url": "https://rseng.github.io/software/repository/gitlab/robizzard/libcdict", "api_url": "https://rseng.github.io/software/api/repos/gitlab/robizzard/libcdict"}, {"uid": "gitlab/emd-dev/emd", "html_url": "https://rseng.github.io/software/repository/gitlab/emd-dev/emd", "api_url": "https://rseng.github.io/software/api/repos/gitlab/emd-dev/emd"}, {"uid": "gitlab/sevecekp/sph", "html_url": "https://rseng.github.io/software/repository/gitlab/sevecekp/sph", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sevecekp/sph"}, {"uid": "gitlab/fduchate/predihood", "html_url": "https://rseng.github.io/software/repository/gitlab/fduchate/predihood", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fduchate/predihood"}, {"uid": "gitlab/andresruiz/Sparkling", "html_url": "https://rseng.github.io/software/repository/gitlab/andresruiz/Sparkling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andresruiz/Sparkling"}, {"uid": "gitlab/dsbowen/conditional-inference", "html_url": "https://rseng.github.io/software/repository/gitlab/dsbowen/conditional-inference", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dsbowen/conditional-inference"}, {"uid": "gitlab/pyFBS/pyFBS", "html_url": "https://rseng.github.io/software/repository/gitlab/pyFBS/pyFBS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pyFBS/pyFBS"}, {"uid": "gitlab/InspectorCell/inspectorcell", "html_url": "https://rseng.github.io/software/repository/gitlab/InspectorCell/inspectorcell", "api_url": "https://rseng.github.io/software/api/repos/gitlab/InspectorCell/inspectorcell"}, {"uid": "gitlab/magnumpi/magnumpi", "html_url": "https://rseng.github.io/software/repository/gitlab/magnumpi/magnumpi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/magnumpi/magnumpi"}, {"uid": "gitlab/gpagano/lensinggw", "html_url": "https://rseng.github.io/software/repository/gitlab/gpagano/lensinggw", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gpagano/lensinggw"}, {"uid": "gitlab/wpettersson/kep_solver", "html_url": "https://rseng.github.io/software/repository/gitlab/wpettersson/kep_solver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/wpettersson/kep_solver"}, {"uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", "html_url": "https://rseng.github.io/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", "api_url": "https://rseng.github.io/software/api/repos/gitlab/MartinBeseda/sa-oo-vqe-qiskit"}, {"uid": "gitlab/ampere2/metalwalls", "html_url": "https://rseng.github.io/software/repository/gitlab/ampere2/metalwalls", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ampere2/metalwalls"}, {"uid": "gitlab/random-quintessence/random-quintessence", "html_url": "https://rseng.github.io/software/repository/gitlab/random-quintessence/random-quintessence", "api_url": "https://rseng.github.io/software/api/repos/gitlab/random-quintessence/random-quintessence"}, {"uid": "gitlab/polmag/P-CORONA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/P-CORONA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/P-CORONA"}, {"uid": "gitlab/polmag/PORTA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/PORTA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/PORTA"}, {"uid": "gitlab/picos-api/picos", "html_url": "https://rseng.github.io/software/repository/gitlab/picos-api/picos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/picos-api/picos"}, {"uid": "gitlab/mbiagetti/persistent_homology_lss", "html_url": "https://rseng.github.io/software/repository/gitlab/mbiagetti/persistent_homology_lss", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mbiagetti/persistent_homology_lss"}, {"uid": "gitlab/libreumg/dataquier", "html_url": "https://rseng.github.io/software/repository/gitlab/libreumg/dataquier", "api_url": "https://rseng.github.io/software/api/repos/gitlab/libreumg/dataquier"}, {"uid": "gitlab/uit-sfb/metapipe", "html_url": "https://rseng.github.io/software/repository/gitlab/uit-sfb/metapipe", "api_url": "https://rseng.github.io/software/api/repos/gitlab/uit-sfb/metapipe"}, {"uid": "gitlab/andrea-tango/ficos", "html_url": "https://rseng.github.io/software/repository/gitlab/andrea-tango/ficos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andrea-tango/ficos"}, {"uid": "gitlab/vda-lab/snowflake", "html_url": "https://rseng.github.io/software/repository/gitlab/vda-lab/snowflake", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vda-lab/snowflake"}, {"uid": "gitlab/eduardo-vitral/balrogo", "html_url": "https://rseng.github.io/software/repository/gitlab/eduardo-vitral/balrogo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eduardo-vitral/balrogo"}, {"uid": "gitlab/ags-data-format-wg/ags-python-library", "html_url": "https://rseng.github.io/software/repository/gitlab/ags-data-format-wg/ags-python-library", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ags-data-format-wg/ags-python-library"}, {"uid": "gitlab/aceteam.kaist/ACE-Molecule", "html_url": "https://rseng.github.io/software/repository/gitlab/aceteam.kaist/ACE-Molecule", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aceteam.kaist/ACE-Molecule"}, {"uid": "gitlab/ztzou/phydl", "html_url": "https://rseng.github.io/software/repository/gitlab/ztzou/phydl", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ztzou/phydl"}, {"uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", "html_url": "https://rseng.github.io/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", "api_url": "https://rseng.github.io/software/api/repos/gitlab/morikawa-lab-osakau/vibir-parallel-compute"}, {"uid": "gitlab/permafrostnet/teaspoon", "html_url": "https://rseng.github.io/software/repository/gitlab/permafrostnet/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/gitlab/permafrostnet/teaspoon"}, {"uid": "gitlab/eleonoraalei/exo-mercat-gui", "html_url": "https://rseng.github.io/software/repository/gitlab/eleonoraalei/exo-mercat-gui", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eleonoraalei/exo-mercat-gui"}, {"uid": "gitlab/gmamon/MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/gitlab/gmamon/MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gmamon/MAMPOSSt"}, {"uid": "gitlab/esa/pyxel", "html_url": "https://rseng.github.io/software/repository/gitlab/esa/pyxel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/esa/pyxel"}, {"uid": "gitlab/habermann_lab/phasik", "html_url": "https://rseng.github.io/software/repository/gitlab/habermann_lab/phasik", "api_url": "https://rseng.github.io/software/api/repos/gitlab/habermann_lab/phasik"}, {"uid": "gitlab/jtagusari/hrisk-noisemodelling", "html_url": "https://rseng.github.io/software/repository/gitlab/jtagusari/hrisk-noisemodelling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jtagusari/hrisk-noisemodelling"}, {"uid": "gitlab/ProjectRHEA/flowsolverrhea", "html_url": "https://rseng.github.io/software/repository/gitlab/ProjectRHEA/flowsolverrhea", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ProjectRHEA/flowsolverrhea"}, {"uid": "gitlab/LouisLab/PiVR", "html_url": "https://rseng.github.io/software/repository/gitlab/LouisLab/PiVR", "api_url": "https://rseng.github.io/software/api/repos/gitlab/LouisLab/PiVR"}, {"uid": "gitlab/qc-devs/aqcnes", "html_url": "https://rseng.github.io/software/repository/gitlab/qc-devs/aqcnes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/qc-devs/aqcnes"}, {"uid": "gitlab/programgreg/tagginglatencyestimator", "html_url": "https://rseng.github.io/software/repository/gitlab/programgreg/tagginglatencyestimator", "api_url": "https://rseng.github.io/software/api/repos/gitlab/programgreg/tagginglatencyestimator"}, {"uid": "gitlab/burstcube/mhealpy", "html_url": "https://rseng.github.io/software/repository/gitlab/burstcube/mhealpy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/burstcube/mhealpy"}, {"uid": "gitlab/EliseLei/easychem", "html_url": "https://rseng.github.io/software/repository/gitlab/EliseLei/easychem", "api_url": "https://rseng.github.io/software/api/repos/gitlab/EliseLei/easychem"}, {"uid": "github/lsds/Neptune", "html_url": "https://rseng.github.io/software/repository/github/lsds/Neptune", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Neptune"}, {"uid": "github/lsds/Saber", "html_url": "https://rseng.github.io/software/repository/github/lsds/Saber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Saber"}, {"uid": "github/lsds/KungFu", "html_url": "https://rseng.github.io/software/repository/github/lsds/KungFu", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/KungFu"}, {"uid": "github/lsds/sgx-lkl", "html_url": "https://rseng.github.io/software/repository/github/lsds/sgx-lkl", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/sgx-lkl"}, {"uid": "github/lsds/LightSaber", "html_url": "https://rseng.github.io/software/repository/github/lsds/LightSaber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/LightSaber"}, {"uid": "github/lsds/TaLoS", "html_url": "https://rseng.github.io/software/repository/github/lsds/TaLoS", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/TaLoS"}, {"uid": "github/lsds/Crossbow", "html_url": "https://rseng.github.io/software/repository/github/lsds/Crossbow", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Crossbow"}, {"uid": "github/lsds/SEEP", "html_url": "https://rseng.github.io/software/repository/github/lsds/SEEP", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/SEEP"}, {"uid": "github/lsds/faasm", "html_url": "https://rseng.github.io/software/repository/github/lsds/faasm", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/faasm"}, {"uid": "github/lsds/Teechain", "html_url": "https://rseng.github.io/software/repository/github/lsds/Teechain", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Teechain"}, {"uid": "github/jcombs1/blasr", "html_url": "https://rseng.github.io/software/repository/github/jcombs1/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/jcombs1/blasr"}, {"uid": "github/gheald/rmclean", "html_url": "https://rseng.github.io/software/repository/github/gheald/rmclean", "api_url": "https://rseng.github.io/software/api/repos/github/gheald/rmclean"}, {"uid": "github/cov-ert/gofasta", "html_url": "https://rseng.github.io/software/repository/github/cov-ert/gofasta", "api_url": "https://rseng.github.io/software/api/repos/github/cov-ert/gofasta"}, {"uid": "github/V-Bernal/GeneNetTools", "html_url": "https://rseng.github.io/software/repository/github/V-Bernal/GeneNetTools", "api_url": "https://rseng.github.io/software/api/repos/github/V-Bernal/GeneNetTools"}, {"uid": "github/tanhevg/GpABC.jl", "html_url": "https://rseng.github.io/software/repository/github/tanhevg/GpABC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tanhevg/GpABC.jl"}, {"uid": "github/ugovaretto/molekel", "html_url": "https://rseng.github.io/software/repository/github/ugovaretto/molekel", "api_url": "https://rseng.github.io/software/api/repos/github/ugovaretto/molekel"}, {"uid": "github/blackjax-devs/blackjax", "html_url": "https://rseng.github.io/software/repository/github/blackjax-devs/blackjax", "api_url": "https://rseng.github.io/software/api/repos/github/blackjax-devs/blackjax"}, {"uid": "github/gavinsimpson/gratia", "html_url": "https://rseng.github.io/software/repository/github/gavinsimpson/gratia", "api_url": "https://rseng.github.io/software/api/repos/github/gavinsimpson/gratia"}, {"uid": "github/arkavo/CUDA-METRO", "html_url": "https://rseng.github.io/software/repository/github/arkavo/CUDA-METRO", "api_url": "https://rseng.github.io/software/api/repos/github/arkavo/CUDA-METRO"}, {"uid": "github/radifar/PyPLIF-HIPPOS", "html_url": "https://rseng.github.io/software/repository/github/radifar/PyPLIF-HIPPOS", "api_url": "https://rseng.github.io/software/api/repos/github/radifar/PyPLIF-HIPPOS"}, {"uid": "github/spexod/iSLAT", "html_url": "https://rseng.github.io/software/repository/github/spexod/iSLAT", "api_url": "https://rseng.github.io/software/api/repos/github/spexod/iSLAT"}, {"uid": "github/lkmklsmn/DrivAER", "html_url": "https://rseng.github.io/software/repository/github/lkmklsmn/DrivAER", "api_url": "https://rseng.github.io/software/api/repos/github/lkmklsmn/DrivAER"}, {"uid": "github/uab-cgds-worthey/quac", "html_url": "https://rseng.github.io/software/repository/github/uab-cgds-worthey/quac", "api_url": "https://rseng.github.io/software/api/repos/github/uab-cgds-worthey/quac"}, {"uid": "github/FireflySpectra/firefly_release", "html_url": "https://rseng.github.io/software/repository/github/FireflySpectra/firefly_release", "api_url": "https://rseng.github.io/software/api/repos/github/FireflySpectra/firefly_release"}, {"uid": "github/GooglingTheCancerGenome/sv-channels", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-channels", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-channels"}, {"uid": "github/GooglingTheCancerGenome/sv-callers", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-callers", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-callers"}, {"uid": "github/GooglingTheCancerGenome/sv-gen", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-gen", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-gen"}, {"uid": "github/rroyaute/h2_breeders_equation", "html_url": "https://rseng.github.io/software/repository/github/rroyaute/h2_breeders_equation", "api_url": "https://rseng.github.io/software/api/repos/github/rroyaute/h2_breeders_equation"}, {"uid": "github/BD2KGenomics/toil", "html_url": "https://rseng.github.io/software/repository/github/BD2KGenomics/toil", "api_url": "https://rseng.github.io/software/api/repos/github/BD2KGenomics/toil"}, {"uid": "github/BMCV/giatools", "html_url": "https://rseng.github.io/software/repository/github/BMCV/giatools", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/giatools"}, {"uid": "github/BMCV/galaxy-image-analysis", "html_url": "https://rseng.github.io/software/repository/github/BMCV/galaxy-image-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/galaxy-image-analysis"}, {"uid": "github/nlesc-sherlock/emma", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/emma", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/emma"}, {"uid": "github/nlesc-sherlock/Rig", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/Rig", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/Rig"}, {"uid": "github/kazewong/flowMC", "html_url": "https://rseng.github.io/software/repository/github/kazewong/flowMC", "api_url": "https://rseng.github.io/software/api/repos/github/kazewong/flowMC"}, {"uid": "github/igmhub/ForestFlow", "html_url": "https://rseng.github.io/software/repository/github/igmhub/ForestFlow", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/ForestFlow"}, {"uid": "github/igmhub/LyaCoLoRe", "html_url": "https://rseng.github.io/software/repository/github/igmhub/LyaCoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/LyaCoLoRe"}, {"uid": "github/igmhub/baofit", "html_url": "https://rseng.github.io/software/repository/github/igmhub/baofit", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/baofit"}, {"uid": "github/igmhub/picca", "html_url": "https://rseng.github.io/software/repository/github/igmhub/picca", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/picca"}, {"uid": "github/jollejolles/pirecorder", "html_url": "https://rseng.github.io/software/repository/github/jollejolles/pirecorder", "api_url": "https://rseng.github.io/software/api/repos/github/jollejolles/pirecorder"}, {"uid": "github/AlexanderLabWHOI/EUKulele", "html_url": "https://rseng.github.io/software/repository/github/AlexanderLabWHOI/EUKulele", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderLabWHOI/EUKulele"}, {"uid": "github/thachnguyen/CRISPRnano", "html_url": "https://rseng.github.io/software/repository/github/thachnguyen/CRISPRnano", "api_url": "https://rseng.github.io/software/api/repos/github/thachnguyen/CRISPRnano"}, {"uid": "github/bayesn/bayesn", "html_url": "https://rseng.github.io/software/repository/github/bayesn/bayesn", "api_url": "https://rseng.github.io/software/api/repos/github/bayesn/bayesn"}, {"uid": "github/Magritte-code/Magritte", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/Magritte", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/Magritte"}, {"uid": "github/Magritte-code/pomme", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/pomme", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/pomme"}, {"uid": "github/mrc-ide/rrq", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/rrq", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/rrq"}, {"uid": "github/mrc-ide/covid19-forecasts-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid19-forecasts-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid19-forecasts-orderly"}, {"uid": "github/mrc-ide/EpiEstim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/EpiEstim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/EpiEstim"}, {"uid": "github/mrc-ide/PhyDyn", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PhyDyn", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PhyDyn"}, {"uid": "github/mrc-ide/ring", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/ring", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/ring"}, {"uid": "github/mrc-ide/cinterpolate", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/cinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/cinterpolate"}, {"uid": "github/mrc-ide/global-lmic-reports-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/global-lmic-reports-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/global-lmic-reports-orderly"}, {"uid": "github/mrc-ide/dust", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dust", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dust"}, {"uid": "github/mrc-ide/dde", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dde", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dde"}, {"uid": "github/mrc-ide/individual", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/individual", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/individual"}, {"uid": "github/mrc-ide/provisionr", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/provisionr", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/provisionr"}, {"uid": "github/mrc-ide/sircovid", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/sircovid", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/sircovid"}, {"uid": "github/mrc-ide/squire", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/squire", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/squire"}, {"uid": "github/mrc-ide/odin", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/odin", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/odin"}, {"uid": "github/mrc-ide/PlasmoMAPI", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PlasmoMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PlasmoMAPI"}, {"uid": "github/mrc-ide/drjacoby", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/drjacoby", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/drjacoby"}, {"uid": "github/mrc-ide/covid-sim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid-sim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid-sim"}, {"uid": "github/tvwenger/millennium-tap-query", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/millennium-tap-query", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/millennium-tap-query"}, {"uid": "github/tvwenger/kd", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kd", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kd"}, {"uid": "github/tvwenger/HII-Region-Models", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/HII-Region-Models", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/HII-Region-Models"}, {"uid": "github/tvwenger/tmbidl", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/tmbidl", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/tmbidl"}, {"uid": "github/tvwenger/wisp", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/wisp", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/wisp"}, {"uid": "github/tvwenger/kinematic_scaleheight", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kinematic_scaleheight", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kinematic_scaleheight"}, {"uid": "github/tvwenger/hii-region-kinematics", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/hii-region-kinematics", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/hii-region-kinematics"}, {"uid": "github/tvwenger/bayes_spec", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/bayes_spec", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/bayes_spec"}, {"uid": "github/stamatak/AxPcoords.dist", "html_url": "https://rseng.github.io/software/repository/github/stamatak/AxPcoords.dist", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/AxPcoords.dist"}, {"uid": "github/stamatak/ExaML", "html_url": "https://rseng.github.io/software/repository/github/stamatak/ExaML", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/ExaML"}, {"uid": "github/PatrickJTaylor/pengWann", "html_url": "https://rseng.github.io/software/repository/github/PatrickJTaylor/pengWann", "api_url": "https://rseng.github.io/software/api/repos/github/PatrickJTaylor/pengWann"}, {"uid": "github/wiederm/transformato", "html_url": "https://rseng.github.io/software/repository/github/wiederm/transformato", "api_url": "https://rseng.github.io/software/api/repos/github/wiederm/transformato"}, {"uid": "github/GaryBAYLOR/mixR", "html_url": "https://rseng.github.io/software/repository/github/GaryBAYLOR/mixR", "api_url": "https://rseng.github.io/software/api/repos/github/GaryBAYLOR/mixR"}, {"uid": "github/barentsen/k2flix", "html_url": "https://rseng.github.io/software/repository/github/barentsen/k2flix", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/k2flix"}, {"uid": "github/barentsen/dave", "html_url": "https://rseng.github.io/software/repository/github/barentsen/dave", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/dave"}, {"uid": "github/kavir1698/EvoDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/kavir1698/EvoDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kavir1698/EvoDynamics.jl"}, {"uid": "github/DJArmstrong/TransitSOM", "html_url": "https://rseng.github.io/software/repository/github/DJArmstrong/TransitSOM", "api_url": "https://rseng.github.io/software/api/repos/github/DJArmstrong/TransitSOM"}, {"uid": "github/kkjawz/coref-ee", "html_url": "https://rseng.github.io/software/repository/github/kkjawz/coref-ee", "api_url": "https://rseng.github.io/software/api/repos/github/kkjawz/coref-ee"}, {"uid": "github/darrenjw/jax-smfsb", "html_url": "https://rseng.github.io/software/repository/github/darrenjw/jax-smfsb", "api_url": "https://rseng.github.io/software/api/repos/github/darrenjw/jax-smfsb"}, {"uid": "github/nikhil-sarin/redback", "html_url": "https://rseng.github.io/software/repository/github/nikhil-sarin/redback", "api_url": "https://rseng.github.io/software/api/repos/github/nikhil-sarin/redback"}, {"uid": "github/VIB-PSB/MINI-EX", "html_url": "https://rseng.github.io/software/repository/github/VIB-PSB/MINI-EX", "api_url": "https://rseng.github.io/software/api/repos/github/VIB-PSB/MINI-EX"}, {"uid": "github/fermo-metabolomics/fermo_core", "html_url": "https://rseng.github.io/software/repository/github/fermo-metabolomics/fermo_core", "api_url": "https://rseng.github.io/software/api/repos/github/fermo-metabolomics/fermo_core"}, {"uid": "github/davi-rodrigues/NAVanalysis", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/NAVanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/NAVanalysis"}, {"uid": "github/davi-rodrigues/CCBH-Numerics", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/CCBH-Numerics", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/CCBH-Numerics"}, {"uid": "github/tesselle/aion", "html_url": "https://rseng.github.io/software/repository/github/tesselle/aion", "api_url": "https://rseng.github.io/software/api/repos/github/tesselle/aion"}, {"uid": "github/soraxas/sbp-env", "html_url": "https://rseng.github.io/software/repository/github/soraxas/sbp-env", "api_url": "https://rseng.github.io/software/api/repos/github/soraxas/sbp-env"}, {"uid": "github/wbalmer/backtrack", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtrack", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtrack"}, {"uid": "github/wbalmer/backtracks", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtracks", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtracks"}, {"uid": "github/ArtificialStellarPopulations/ArtPop", "html_url": "https://rseng.github.io/software/repository/github/ArtificialStellarPopulations/ArtPop", "api_url": "https://rseng.github.io/software/api/repos/github/ArtificialStellarPopulations/ArtPop"}, {"uid": "github/jonschwenk/RivGraph", "html_url": "https://rseng.github.io/software/repository/github/jonschwenk/RivGraph", "api_url": "https://rseng.github.io/software/api/repos/github/jonschwenk/RivGraph"}, {"uid": "github/ZacharyJia/opsdn", "html_url": "https://rseng.github.io/software/repository/github/ZacharyJia/opsdn", "api_url": "https://rseng.github.io/software/api/repos/github/ZacharyJia/opsdn"}, {"uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", "html_url": "https://rseng.github.io/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", "api_url": "https://rseng.github.io/software/api/repos/github/MehrnooshTahani/MappingBLOS_MolecularClouds"}, {"uid": "github/xiaotiand/FunFor", "html_url": "https://rseng.github.io/software/repository/github/xiaotiand/FunFor", "api_url": "https://rseng.github.io/software/api/repos/github/xiaotiand/FunFor"}, {"uid": "github/dpseidel/stmove", "html_url": "https://rseng.github.io/software/repository/github/dpseidel/stmove", "api_url": "https://rseng.github.io/software/api/repos/github/dpseidel/stmove"}, {"uid": "github/tahirulqamar/Deep-HPI-pred", "html_url": "https://rseng.github.io/software/repository/github/tahirulqamar/Deep-HPI-pred", "api_url": "https://rseng.github.io/software/api/repos/github/tahirulqamar/Deep-HPI-pred"}, {"uid": "github/MickaelRigault/skysurvey", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/skysurvey", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/skysurvey"}, {"uid": "github/MickaelRigault/ztfquery", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/ztfquery", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/ztfquery"}, {"uid": "github/NERC-CEH/RMAVIS", "html_url": "https://rseng.github.io/software/repository/github/NERC-CEH/RMAVIS", "api_url": "https://rseng.github.io/software/api/repos/github/NERC-CEH/RMAVIS"}, {"uid": "github/dpalmasan/TRUNAJOD2.0", "html_url": "https://rseng.github.io/software/repository/github/dpalmasan/TRUNAJOD2.0", "api_url": "https://rseng.github.io/software/api/repos/github/dpalmasan/TRUNAJOD2.0"}, {"uid": "github/SHTOOLS/SHTOOLS", "html_url": "https://rseng.github.io/software/repository/github/SHTOOLS/SHTOOLS", "api_url": "https://rseng.github.io/software/api/repos/github/SHTOOLS/SHTOOLS"}, {"uid": "github/Merck/BioPhi", "html_url": "https://rseng.github.io/software/repository/github/Merck/BioPhi", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/BioPhi"}, {"uid": "github/Merck/pkglite", "html_url": "https://rseng.github.io/software/repository/github/Merck/pkglite", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/pkglite"}, {"uid": "github/franpoz/SHERLOCK", "html_url": "https://rseng.github.io/software/repository/github/franpoz/SHERLOCK", "api_url": "https://rseng.github.io/software/api/repos/github/franpoz/SHERLOCK"}, {"uid": "github/stegmaja/TSE", "html_url": "https://rseng.github.io/software/repository/github/stegmaja/TSE", "api_url": "https://rseng.github.io/software/api/repos/github/stegmaja/TSE"}, {"uid": "github/engyasin/Offline_MOT", "html_url": "https://rseng.github.io/software/repository/github/engyasin/Offline_MOT", "api_url": "https://rseng.github.io/software/api/repos/github/engyasin/Offline_MOT"}, {"uid": "github/DZeevi-Lab/TinkerHap", "html_url": "https://rseng.github.io/software/repository/github/DZeevi-Lab/TinkerHap", "api_url": "https://rseng.github.io/software/api/repos/github/DZeevi-Lab/TinkerHap"}, {"uid": "github/nlesc/embodied-emotions-scripts", "html_url": "https://rseng.github.io/software/repository/github/nlesc/embodied-emotions-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/embodied-emotions-scripts"}, {"uid": "github/nlesc/scriptcwl", "html_url": "https://rseng.github.io/software/repository/github/nlesc/scriptcwl", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/scriptcwl"}, {"uid": "github/ComparativeGenomicsToolkit/cactus", "html_url": "https://rseng.github.io/software/repository/github/ComparativeGenomicsToolkit/cactus", "api_url": "https://rseng.github.io/software/api/repos/github/ComparativeGenomicsToolkit/cactus"}, {"uid": "github/brinckmann/montepython_public", "html_url": "https://rseng.github.io/software/repository/github/brinckmann/montepython_public", "api_url": "https://rseng.github.io/software/api/repos/github/brinckmann/montepython_public"}, {"uid": "github/ivadomed/ivadomed", "html_url": "https://rseng.github.io/software/repository/github/ivadomed/ivadomed", "api_url": "https://rseng.github.io/software/api/repos/github/ivadomed/ivadomed"}, {"uid": "github/sanger-pathogens/Artemis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Artemis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Artemis"}, {"uid": "github/sanger-pathogens/ariba", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/ariba", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/ariba"}, {"uid": "github/sanger-pathogens/assembly-stats", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/assembly-stats", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/assembly-stats"}, {"uid": "github/sanger-pathogens/pymummer", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/pymummer", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/pymummer"}, {"uid": "github/sanger-pathogens/snp-sites", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/snp-sites", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/snp-sites"}, {"uid": "github/sanger-pathogens/circlator", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/circlator", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/circlator"}, {"uid": "github/sanger-pathogens/Roary", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Roary", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Roary"}, {"uid": "github/sanger-pathogens/gubbins", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/gubbins", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/gubbins"}, {"uid": "github/sanger-pathogens/Bio-Tradis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Bio-Tradis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Bio-Tradis"}, {"uid": "github/sanger-pathogens/iva", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/iva", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/iva"}, {"uid": "github/sanger-pathogens/Fastaq", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Fastaq", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Fastaq"}, {"uid": "github/swiftbiosciences/primerclip", "html_url": "https://rseng.github.io/software/repository/github/swiftbiosciences/primerclip", "api_url": "https://rseng.github.io/software/api/repos/github/swiftbiosciences/primerclip"}, {"uid": "github/tatekawa-astron/PN", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/PN", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/PN"}, {"uid": "github/tatekawa-astron/3LPT-init", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/3LPT-init", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/3LPT-init"}, {"uid": "github/ericcombiolab/LRTK", "html_url": "https://rseng.github.io/software/repository/github/ericcombiolab/LRTK", "api_url": "https://rseng.github.io/software/api/repos/github/ericcombiolab/LRTK"}, {"uid": "github/ropensci/DataSpaceR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataSpaceR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataSpaceR"}, {"uid": "github/ropensci/restez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/restez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/restez"}, {"uid": "github/ropensci/rgpdd", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgpdd", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgpdd"}, {"uid": "github/ropensci/tiler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tiler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tiler"}, {"uid": "github/ropensci/bomrang", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bomrang", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bomrang"}, {"uid": "github/ropensci/brranching", "html_url": "https://rseng.github.io/software/repository/github/ropensci/brranching", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/brranching"}, {"uid": "github/ropensci/SymbiotaR2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/SymbiotaR2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/SymbiotaR2"}, {"uid": "github/ropensci/gittargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gittargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gittargets"}, {"uid": "github/ropensci/tidypmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidypmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidypmc"}, {"uid": "github/ropensci/bikedata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bikedata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bikedata"}, {"uid": "github/ropensci/datapack", "html_url": "https://rseng.github.io/software/repository/github/ropensci/datapack", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/datapack"}, {"uid": "github/ropensci/textreuse", "html_url": "https://rseng.github.io/software/repository/github/ropensci/textreuse", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/textreuse"}, {"uid": "github/ropensci/opentripplanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opentripplanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opentripplanner"}, {"uid": "github/ropensci/cchecks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cchecks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cchecks"}, {"uid": "github/ropensci/smapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/smapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/smapr"}, {"uid": "github/ropensci/osmextract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmextract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmextract"}, {"uid": "github/ropensci/xslt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/xslt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/xslt"}, {"uid": "github/ropensci/zbank", "html_url": "https://rseng.github.io/software/repository/github/ropensci/zbank", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/zbank"}, {"uid": "github/ropensci/tarchetypes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tarchetypes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tarchetypes"}, {"uid": "github/ropensci/wellknown", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wellknown", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wellknown"}, {"uid": "github/ropensci/treebase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treebase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treebase"}, {"uid": "github/ropensci/pubchunks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pubchunks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pubchunks"}, {"uid": "github/ropensci/dbhydroR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbhydroR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbhydroR"}, {"uid": "github/ropensci/photosearcher", "html_url": "https://rseng.github.io/software/repository/github/ropensci/photosearcher", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/photosearcher"}, {"uid": "github/ropensci/rtweet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtweet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtweet"}, {"uid": "github/ropensci/microdemic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/microdemic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/microdemic"}, {"uid": "github/ropensci/webmockr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webmockr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webmockr"}, {"uid": "github/ropensci/comtradr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/comtradr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/comtradr"}, {"uid": "github/ropensci/wikitaxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wikitaxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wikitaxa"}, {"uid": "github/ropensci/dittodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dittodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dittodb"}, {"uid": "github/ropensci/chlorpromazineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chlorpromazineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chlorpromazineR"}, {"uid": "github/ropensci/rnaturalearthhires", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthhires", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthhires"}, {"uid": "github/ropensci/rmangal", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rmangal", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rmangal"}, {"uid": "github/ropensci/jstor", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jstor", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jstor"}, {"uid": "github/ropensci/traits", "html_url": "https://rseng.github.io/software/repository/github/ropensci/traits", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/traits"}, {"uid": "github/ropensci/cleanEHR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cleanEHR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cleanEHR"}, {"uid": "github/ropensci/pathviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pathviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pathviewr"}, {"uid": "github/ropensci/tradestatistics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tradestatistics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tradestatistics"}, {"uid": "github/ropensci/rsnps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsnps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsnps"}, {"uid": "github/ropensci/ruODK", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ruODK", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ruODK"}, {"uid": "github/ropensci/dataaimsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataaimsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataaimsr"}, {"uid": "github/ropensci/rcites", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcites", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcites"}, {"uid": "github/ropensci/colocr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/colocr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/colocr"}, {"uid": "github/ropensci/mctq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mctq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mctq"}, {"uid": "github/ropensci/rfigshare", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfigshare", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfigshare"}, {"uid": "github/ropensci/prism", "html_url": "https://rseng.github.io/software/repository/github/ropensci/prism", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/prism"}, {"uid": "github/ropensci/osmapiR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmapiR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmapiR"}, {"uid": "github/ropensci/nomisr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nomisr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nomisr"}, {"uid": "github/ropensci/rdefra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdefra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdefra"}, {"uid": "github/ropensci/graphql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/graphql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/graphql"}, {"uid": "github/ropensci/EndoMineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EndoMineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EndoMineR"}, {"uid": "github/ropensci/rplos", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rplos", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rplos"}, {"uid": "github/ropensci/readODS", "html_url": "https://rseng.github.io/software/repository/github/ropensci/readODS", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/readODS"}, {"uid": "github/ropensci/rWBclimate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rWBclimate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rWBclimate"}, {"uid": "github/ropensci/ckanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ckanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ckanr"}, {"uid": "github/ropensci/stats19", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stats19", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stats19"}, {"uid": "github/ropensci/DoOR.data", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.data", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.data"}, {"uid": "github/ropensci/sofa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/sofa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/sofa"}, {"uid": "github/ropensci/trufflesniffer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/trufflesniffer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/trufflesniffer"}, {"uid": "github/ropensci/GSODR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/GSODR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/GSODR"}, {"uid": "github/ropensci/outcomerate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outcomerate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outcomerate"}, {"uid": "github/ropensci/elastic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/elastic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/elastic"}, {"uid": "github/ropensci/visdat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/visdat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/visdat"}, {"uid": "github/ropensci/phylogram", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylogram", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylogram"}, {"uid": "github/ropensci/unrtf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unrtf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unrtf"}, {"uid": "github/ropensci/weathercan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weathercan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weathercan"}, {"uid": "github/ropensci/rrlite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrlite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrlite"}, {"uid": "github/ropensci/c14bazAAR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c14bazAAR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c14bazAAR"}, {"uid": "github/ropensci/rtika", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtika", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtika"}, {"uid": "github/ropensci/rbhl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbhl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbhl"}, {"uid": "github/ropensci/refimpact", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refimpact", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refimpact"}, {"uid": "github/ropensci/predictNMB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/predictNMB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/predictNMB"}, {"uid": "github/ropensci/bib2df", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bib2df", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bib2df"}, {"uid": "github/ropensci/MODISTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODISTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODISTools"}, {"uid": "github/ropensci/spiro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spiro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spiro"}, {"uid": "github/ropensci/tesseract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tesseract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tesseract"}, {"uid": "github/ropensci/getlandsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getlandsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getlandsat"}, {"uid": "github/ropensci/rAltmetric", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAltmetric", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAltmetric"}, {"uid": "github/ropensci/NLMR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/NLMR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/NLMR"}, {"uid": "github/ropensci/lightr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lightr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lightr"}, {"uid": "github/ropensci/gutenbergr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gutenbergr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gutenbergr"}, {"uid": "github/ropensci/rnassqs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnassqs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnassqs"}, {"uid": "github/ropensci/RSelenium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RSelenium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RSelenium"}, {"uid": "github/ropensci/rfishbase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfishbase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfishbase"}, {"uid": "github/ropensci/piggyback", "html_url": "https://rseng.github.io/software/repository/github/ropensci/piggyback", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/piggyback"}, {"uid": "github/ropensci/rdatacite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdatacite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdatacite"}, {"uid": "github/ropensci/pdftools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pdftools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pdftools"}, {"uid": "github/ropensci/rfema", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfema", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfema"}, {"uid": "github/ropensci/worrms", "html_url": "https://rseng.github.io/software/repository/github/ropensci/worrms", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/worrms"}, {"uid": "github/ropensci/grainchanger", "html_url": "https://rseng.github.io/software/repository/github/ropensci/grainchanger", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/grainchanger"}, {"uid": "github/ropensci/rAvis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAvis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAvis"}, {"uid": "github/ropensci/conditionz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/conditionz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/conditionz"}, {"uid": "github/ropensci/antiword", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antiword", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antiword"}, {"uid": "github/ropensci/skimr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skimr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skimr"}, {"uid": "github/ropensci/rnoaa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnoaa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnoaa"}, {"uid": "github/ropensci/plotly", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plotly", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plotly"}, {"uid": "github/ropensci/pangaear", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pangaear", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pangaear"}, {"uid": "github/ropensci/fingertipsR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fingertipsR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fingertipsR"}, {"uid": "github/ropensci/treestartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treestartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treestartr"}, {"uid": "github/ropensci/rnaturalearth", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearth", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearth"}, {"uid": "github/ropensci/gistr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gistr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gistr"}, {"uid": "github/ropensci/UCSCXenaTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/UCSCXenaTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/UCSCXenaTools"}, {"uid": "github/ropensci/rentrez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rentrez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rentrez"}, {"uid": "github/ropensci/stplanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stplanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stplanr"}, {"uid": "github/ropensci/pixelclasser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pixelclasser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pixelclasser"}, {"uid": "github/ropensci/ritis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ritis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ritis"}, {"uid": "github/ropensci/arkdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/arkdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/arkdb"}, {"uid": "github/ropensci/cffr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cffr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cffr"}, {"uid": "github/ropensci/isdparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/isdparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/isdparser"}, {"uid": "github/ropensci/antanym", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antanym", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antanym"}, {"uid": "github/ropensci/rnpn", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnpn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnpn"}, {"uid": "github/ropensci/mapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapr"}, {"uid": "github/ropensci/rusda", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rusda", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rusda"}, {"uid": "github/ropensci/jsonvalidate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonvalidate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonvalidate"}, {"uid": "github/ropensci/rinat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rinat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rinat"}, {"uid": "github/ropensci/unifir", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unifir", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unifir"}, {"uid": "github/ropensci/cyphr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cyphr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cyphr"}, {"uid": "github/ropensci/AntWeb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/AntWeb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/AntWeb"}, {"uid": "github/ropensci/wdman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wdman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wdman"}, {"uid": "github/ropensci/taxlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxlist"}, {"uid": "github/ropensci/outsider.base", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.base", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.base"}, {"uid": "github/ropensci/chromer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chromer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chromer"}, {"uid": "github/ropensci/ijtiff", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ijtiff", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ijtiff"}, {"uid": "github/ropensci/tacmagic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tacmagic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tacmagic"}, {"uid": "github/ropensci/gitignore", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gitignore", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gitignore"}, {"uid": "github/ropensci/osfr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osfr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osfr"}, {"uid": "github/ropensci/bold", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bold", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bold"}, {"uid": "github/ropensci/allodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/allodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/allodb"}, {"uid": "github/ropensci/tracerer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tracerer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tracerer"}, {"uid": "github/ropensci/internetarchive", "html_url": "https://rseng.github.io/software/repository/github/ropensci/internetarchive", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/internetarchive"}, {"uid": "github/ropensci/historydata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/historydata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/historydata"}, {"uid": "github/ropensci/dataspice", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataspice", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataspice"}, {"uid": "github/ropensci/nbaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nbaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nbaR"}, {"uid": "github/ropensci/rcrossref", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcrossref", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcrossref"}, {"uid": "github/ropensci/av", "html_url": "https://rseng.github.io/software/repository/github/ropensci/av", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/av"}, {"uid": "github/ropensci/katex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/katex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/katex"}, {"uid": "github/ropensci/DataPackageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataPackageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataPackageR"}, {"uid": "github/ropensci/babette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/babette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/babette"}, {"uid": "github/ropensci/weatherOz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weatherOz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weatherOz"}, {"uid": "github/ropensci/natserv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/natserv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/natserv"}, {"uid": "github/ropensci/rgbif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgbif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgbif"}, {"uid": "github/ropensci/charlatan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/charlatan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/charlatan"}, {"uid": "github/ropensci/rredlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rredlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rredlist"}, {"uid": "github/ropensci/robotstxt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/robotstxt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/robotstxt"}, {"uid": "github/ropensci/ecoengine", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ecoengine", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ecoengine"}, {"uid": "github/ropensci/rppo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rppo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rppo"}, {"uid": "github/ropensci/emld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/emld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/emld"}, {"uid": "github/ropensci/gtexr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtexr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtexr"}, {"uid": "github/ropensci/epubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/epubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/epubr"}, {"uid": "github/ropensci/tif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tif"}, {"uid": "github/ropensci/qpdf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qpdf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qpdf"}, {"uid": "github/ropensci/rrricanes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanes"}, {"uid": "github/ropensci/opencv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencv"}, {"uid": "github/ropensci/refsplitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refsplitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refsplitr"}, {"uid": "github/ropensci/beautier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beautier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beautier"}, {"uid": "github/ropensci/magick", "html_url": "https://rseng.github.io/software/repository/github/ropensci/magick", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/magick"}, {"uid": "github/ropensci/rdhs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdhs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdhs"}, {"uid": "github/ropensci/exoplanets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/exoplanets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/exoplanets"}, {"uid": "github/ropensci/ghql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ghql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ghql"}, {"uid": "github/ropensci/treedata.table", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treedata.table", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treedata.table"}, {"uid": "github/ropensci/hunspell", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hunspell", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hunspell"}, {"uid": "github/ropensci/tidync", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidync", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidync"}, {"uid": "github/ropensci/essurvey", "html_url": "https://rseng.github.io/software/repository/github/ropensci/essurvey", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/essurvey"}, {"uid": "github/ropensci/mcbette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mcbette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mcbette"}, {"uid": "github/ropensci/rromeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rromeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rromeo"}, {"uid": "github/ropensci/suppdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/suppdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/suppdata"}, {"uid": "github/ropensci/circle", "html_url": "https://rseng.github.io/software/repository/github/ropensci/circle", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/circle"}, {"uid": "github/ropensci/helminthR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/helminthR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/helminthR"}, {"uid": "github/ropensci/googleLanguageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/googleLanguageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/googleLanguageR"}, {"uid": "github/ropensci/staypuft", "html_url": "https://rseng.github.io/software/repository/github/ropensci/staypuft", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/staypuft"}, {"uid": "github/ropensci/solrium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/solrium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/solrium"}, {"uid": "github/ropensci/DoOR.functions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.functions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.functions"}, {"uid": "github/ropensci/tidyhydat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyhydat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyhydat"}, {"uid": "github/ropensci/hddtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hddtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hddtools"}, {"uid": "github/ropensci/rebird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rebird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rebird"}, {"uid": "github/ropensci/qualtRics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qualtRics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qualtRics"}, {"uid": "github/ropensci/cld2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld2"}, {"uid": "github/ropensci/getCRUCLdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getCRUCLdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getCRUCLdata"}, {"uid": "github/ropensci/cld3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld3"}, {"uid": "github/ropensci/tic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tic"}, {"uid": "github/ropensci/gtfsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtfsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtfsr"}, {"uid": "github/ropensci/namext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/namext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/namext"}, {"uid": "github/ropensci/excluder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/excluder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/excluder"}, {"uid": "github/ropensci/taxview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxview"}, {"uid": "github/ropensci/paleobioDB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/paleobioDB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/paleobioDB"}, {"uid": "github/ropensci/RefManageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RefManageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RefManageR"}, {"uid": "github/ropensci/taxadb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxadb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxadb"}, {"uid": "github/ropensci/rcoreoa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcoreoa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcoreoa"}, {"uid": "github/ropensci/bibtex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bibtex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bibtex"}, {"uid": "github/ropensci/ssh", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ssh", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ssh"}, {"uid": "github/ropensci/assertr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/assertr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/assertr"}, {"uid": "github/ropensci/eia", "html_url": "https://rseng.github.io/software/repository/github/ropensci/eia", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/eia"}, {"uid": "github/ropensci/webchem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webchem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webchem"}, {"uid": "github/ropensci/spocc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spocc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spocc"}, {"uid": "github/ropensci/daiquiri", "html_url": "https://rseng.github.io/software/repository/github/ropensci/daiquiri", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/daiquiri"}, {"uid": "github/ropensci/medrxivr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/medrxivr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/medrxivr"}, {"uid": "github/ropensci/rsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsat"}, {"uid": "github/ropensci/drake", "html_url": "https://rseng.github.io/software/repository/github/ropensci/drake", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/drake"}, {"uid": "github/ropensci/rOPTRAM", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rOPTRAM", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rOPTRAM"}, {"uid": "github/ropensci/biomartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/biomartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/biomartr"}, {"uid": "github/ropensci/jqr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jqr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jqr"}, {"uid": "github/ropensci/onekp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/onekp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/onekp"}, {"uid": "github/ropensci/citesdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citesdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citesdb"}, {"uid": "github/ropensci/FedData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/FedData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/FedData"}, {"uid": "github/ropensci/taxizedb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxizedb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxizedb"}, {"uid": "github/ropensci/hydroscoper", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hydroscoper", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hydroscoper"}, {"uid": "github/ropensci/rorcid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rorcid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rorcid"}, {"uid": "github/ropensci/cde", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cde", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cde"}, {"uid": "github/ropensci/rzmq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rzmq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rzmq"}, {"uid": "github/ropensci/chirps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chirps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chirps"}, {"uid": "github/ropensci/bowerbird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bowerbird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bowerbird"}, {"uid": "github/ropensci/targets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/targets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/targets"}, {"uid": "github/ropensci/nasapower", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nasapower", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nasapower"}, {"uid": "github/ropensci/riem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/riem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/riem"}, {"uid": "github/ropensci/nodbi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nodbi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nodbi"}, {"uid": "github/ropensci/randgeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/randgeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/randgeo"}, {"uid": "github/ropensci/lingtypology", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lingtypology", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lingtypology"}, {"uid": "github/ropensci/tidyqpcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyqpcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyqpcr"}, {"uid": "github/ropensci/oai", "html_url": "https://rseng.github.io/software/repository/github/ropensci/oai", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/oai"}, {"uid": "github/ropensci/rrricanesdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanesdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanesdata"}, {"uid": "github/ropensci/codemetar", "html_url": "https://rseng.github.io/software/repository/github/ropensci/codemetar", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/codemetar"}, {"uid": "github/ropensci/geojsonlint", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonlint", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonlint"}, {"uid": "github/ropensci/taxize", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxize", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxize"}, {"uid": "github/ropensci/mregions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mregions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mregions"}, {"uid": "github/ropensci/opencage", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencage", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencage"}, {"uid": "github/ropensci/slopes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/slopes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/slopes"}, {"uid": "github/ropensci/coder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/coder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/coder"}, {"uid": "github/ropensci/addressable", "html_url": "https://rseng.github.io/software/repository/github/ropensci/addressable", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/addressable"}, {"uid": "github/ropensci/rb3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rb3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rb3"}, {"uid": "github/ropensci/hoardr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hoardr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hoardr"}, {"uid": "github/ropensci/camsRad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/camsRad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/camsRad"}, {"uid": "github/ropensci/rperseus", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rperseus", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rperseus"}, {"uid": "github/ropensci/ots", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ots", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ots"}, {"uid": "github/ropensci/gigs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gigs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gigs"}, {"uid": "github/ropensci/handlr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/handlr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/handlr"}, {"uid": "github/ropensci/taxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxa"}, {"uid": "github/ropensci/Rpolyhedra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rpolyhedra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rpolyhedra"}, {"uid": "github/ropensci/pendulum", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pendulum"}, {"uid": "github/ropensci/fauxpas", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fauxpas", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fauxpas"}, {"uid": "github/ropensci/PostcodesioR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/PostcodesioR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/PostcodesioR"}, {"uid": "github/ropensci/workloopR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/workloopR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/workloopR"}, {"uid": "github/ropensci/clifro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/clifro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/clifro"}, {"uid": "github/ropensci/rotl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rotl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rotl"}, {"uid": "github/ropensci/finch", "html_url": "https://rseng.github.io/software/repository/github/ropensci/finch", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/finch"}, {"uid": "github/ropensci/rdflib", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdflib", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdflib"}, {"uid": "github/ropensci/parzer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/parzer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/parzer"}, {"uid": "github/ropensci/rbace", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbace", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbace"}, {"uid": "github/ropensci/infx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/infx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/infx"}, {"uid": "github/ropensci/fireexposuR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fireexposuR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fireexposuR"}, {"uid": "github/ropensci/Rclean", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rclean", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rclean"}, {"uid": "github/ropensci/tabulizer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tabulizer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tabulizer"}, {"uid": "github/ropensci/BaseSet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/BaseSet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/BaseSet"}, {"uid": "github/ropensci/spelling", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spelling", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spelling"}, {"uid": "github/ropensci/vcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/vcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/vcr"}, {"uid": "github/ropensci/roadoi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/roadoi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/roadoi"}, {"uid": "github/ropensci/baRcodeR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/baRcodeR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/baRcodeR"}, {"uid": "github/ropensci/USAboundariesData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundariesData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundariesData"}, {"uid": "github/ropensci/ezknitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ezknitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ezknitr"}, {"uid": "github/ropensci/iheatmapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/iheatmapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/iheatmapr"}, {"uid": "github/ropensci/terrainr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/terrainr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/terrainr"}, {"uid": "github/ropensci/osmplotr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmplotr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmplotr"}, {"uid": "github/ropensci/wateRinfo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wateRinfo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wateRinfo"}, {"uid": "github/ropensci/cRegulome", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cRegulome", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cRegulome"}, {"uid": "github/ropensci/awardFindR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/awardFindR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/awardFindR"}, {"uid": "github/ropensci/phylotaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylotaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylotaR"}, {"uid": "github/ropensci/git2r", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2r", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2r"}, {"uid": "github/ropensci/citecorp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citecorp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citecorp"}, {"uid": "github/ropensci/scrubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/scrubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/scrubr"}, {"uid": "github/ropensci/gpg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gpg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gpg"}, {"uid": "github/ropensci/git2rdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2rdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2rdata"}, {"uid": "github/ropensci/writexl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/writexl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/writexl"}, {"uid": "github/ropensci/aRxiv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/aRxiv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/aRxiv"}, {"uid": "github/ropensci/RNeXML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RNeXML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RNeXML"}, {"uid": "github/ropensci/geojsonio", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonio", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonio"}, {"uid": "github/ropensci/bittrex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bittrex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bittrex"}, {"uid": "github/ropensci/osmdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmdata"}, {"uid": "github/ropensci/nlrx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nlrx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nlrx"}, {"uid": "github/ropensci/rgnparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgnparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgnparser"}, {"uid": "github/ropensci/censo2017", "html_url": "https://rseng.github.io/software/repository/github/ropensci/censo2017", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/censo2017"}, {"uid": "github/ropensci/rdataretriever", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdataretriever", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdataretriever"}, {"uid": "github/ropensci/MtreeRing", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MtreeRing", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MtreeRing"}, {"uid": "github/ropensci/rcol", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcol", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcol"}, {"uid": "github/ropensci/neotoma", "html_url": "https://rseng.github.io/software/repository/github/ropensci/neotoma", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/neotoma"}, {"uid": "github/ropensci/outsider", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider"}, {"uid": "github/ropensci/rdryad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdryad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdryad"}, {"uid": "github/ropensci/USAboundaries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundaries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundaries"}, {"uid": "github/ropensci/beastier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beastier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beastier"}, {"uid": "github/ropensci/opencontext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencontext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencontext"}, {"uid": "github/ropensci/virtuoso", "html_url": "https://rseng.github.io/software/repository/github/ropensci/virtuoso", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/virtuoso"}, {"uid": "github/ropensci/skynet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skynet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skynet"}, {"uid": "github/ropensci/outsider.devtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.devtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.devtools"}, {"uid": "github/ropensci/phylocomr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylocomr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylocomr"}, {"uid": "github/ropensci/crul", "html_url": "https://rseng.github.io/software/repository/github/ropensci/crul", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/crul"}, {"uid": "github/ropensci/phonfieldwork", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phonfieldwork", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phonfieldwork"}, {"uid": "github/ropensci/fulltext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fulltext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fulltext"}, {"uid": "github/ropensci/plater", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plater", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plater"}, {"uid": "github/ropensci/rglobi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rglobi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rglobi"}, {"uid": "github/ropensci/landscapetools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/landscapetools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/landscapetools"}, {"uid": "github/ropensci/patentsview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/patentsview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/patentsview"}, {"uid": "github/ropensci/MODIStsp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODIStsp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODIStsp"}, {"uid": "github/ropensci/binman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/binman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/binman"}, {"uid": "github/ropensci/tokenizers", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tokenizers", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tokenizers"}, {"uid": "github/ropensci/jenkins", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jenkins", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jenkins"}, {"uid": "github/ropensci/mapscanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapscanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapscanner"}, {"uid": "github/ropensci/rsvg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsvg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsvg"}, {"uid": "github/ropensci/jsonld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonld"}, {"uid": "github/ropensci/spatsoc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spatsoc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spatsoc"}, {"uid": "github/ropensci/popler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/popler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/popler"}, {"uid": "github/ropensci/geonames", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geonames", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geonames"}, {"uid": "github/ropensci/rcitoid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcitoid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcitoid"}, {"uid": "github/ropensci/tinkr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tinkr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tinkr"}, {"uid": "github/ropensci/jagstargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jagstargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jagstargets"}, {"uid": "github/ropensci/europepmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/europepmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/europepmc"}, {"uid": "github/ropensci/EML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EML"}, {"uid": "github/ropensci/ramlegacy", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ramlegacy", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ramlegacy"}, {"uid": "github/ropensci/dbparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbparser"}, {"uid": "github/ropensci/rvertnet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rvertnet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rvertnet"}, {"uid": "github/ropensci/rnaturalearthdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthdata"}, {"uid": "github/ropensci/rerddap", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rerddap", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rerddap"}, {"uid": "github/ropensci/mauricer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mauricer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mauricer"}, {"uid": "github/ropensci/rfisheries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfisheries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfisheries"}, {"uid": "github/ropensci/seasl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/seasl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/seasl"}, {"uid": "github/ropensci/CoordinateCleaner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/CoordinateCleaner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/CoordinateCleaner"}, {"uid": "github/ropensci/timefuzz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/timefuzz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/timefuzz"}, {"uid": "github/ropensci/stantargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stantargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stantargets"}, {"uid": "github/jsobeck/MOOG_SCAT", "html_url": "https://rseng.github.io/software/repository/github/jsobeck/MOOG_SCAT", "api_url": "https://rseng.github.io/software/api/repos/github/jsobeck/MOOG_SCAT"}, {"uid": "github/ot483/NetCom", "html_url": "https://rseng.github.io/software/repository/github/ot483/NetCom", "api_url": "https://rseng.github.io/software/api/repos/github/ot483/NetCom"}, {"uid": "github/chasmani/piecewise-regression", "html_url": "https://rseng.github.io/software/repository/github/chasmani/piecewise-regression", "api_url": "https://rseng.github.io/software/api/repos/github/chasmani/piecewise-regression"}, {"uid": "github/RenneLab/hybkit", "html_url": "https://rseng.github.io/software/repository/github/RenneLab/hybkit", "api_url": "https://rseng.github.io/software/api/repos/github/RenneLab/hybkit"}, {"uid": "github/jah1994/PyTorchDIA", "html_url": "https://rseng.github.io/software/repository/github/jah1994/PyTorchDIA", "api_url": "https://rseng.github.io/software/api/repos/github/jah1994/PyTorchDIA"}, {"uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole"}, {"uid": "github/eXtremeGravityInstitute/QuickCBC", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/QuickCBC", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/QuickCBC"}, {"uid": "github/cosmicrays/hermes", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/hermes", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/hermes"}, {"uid": "github/cosmicrays/DRAGON", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/DRAGON", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/DRAGON"}, {"uid": "github/amberbiology/scribl", "html_url": "https://rseng.github.io/software/repository/github/amberbiology/scribl", "api_url": "https://rseng.github.io/software/api/repos/github/amberbiology/scribl"}, {"uid": "github/ConorMacBride/mcalf", "html_url": "https://rseng.github.io/software/repository/github/ConorMacBride/mcalf", "api_url": "https://rseng.github.io/software/api/repos/github/ConorMacBride/mcalf"}, {"uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", "html_url": "https://rseng.github.io/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", "api_url": "https://rseng.github.io/software/api/repos/github/Muhammad-Arif-NUST/BVP_Pred_Unb"}, {"uid": "github/vfonov/DARQ", "html_url": "https://rseng.github.io/software/repository/github/vfonov/DARQ", "api_url": "https://rseng.github.io/software/api/repos/github/vfonov/DARQ"}, {"uid": "github/AninaTimmermann/ECCOplanets", "html_url": "https://rseng.github.io/software/repository/github/AninaTimmermann/ECCOplanets", "api_url": "https://rseng.github.io/software/api/repos/github/AninaTimmermann/ECCOplanets"}, {"uid": "github/haowang-astro/jetsimpy", "html_url": "https://rseng.github.io/software/repository/github/haowang-astro/jetsimpy", "api_url": "https://rseng.github.io/software/api/repos/github/haowang-astro/jetsimpy"}, {"uid": "github/cheng-zhao/FCFC", "html_url": "https://rseng.github.io/software/repository/github/cheng-zhao/FCFC", "api_url": "https://rseng.github.io/software/api/repos/github/cheng-zhao/FCFC"}, {"uid": "github/peikuan/WBBC", "html_url": "https://rseng.github.io/software/repository/github/peikuan/WBBC", "api_url": "https://rseng.github.io/software/api/repos/github/peikuan/WBBC"}, {"uid": "github/jeffdaily/parasail-python", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail-python", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail-python"}, {"uid": "github/jeffdaily/parasail", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail"}, {"uid": "github/MathynVanD/GraFIT", "html_url": "https://rseng.github.io/software/repository/github/MathynVanD/GraFIT", "api_url": "https://rseng.github.io/software/api/repos/github/MathynVanD/GraFIT"}, {"uid": "github/dbosul/CWITools", "html_url": "https://rseng.github.io/software/repository/github/dbosul/CWITools", "api_url": "https://rseng.github.io/software/api/repos/github/dbosul/CWITools"}, {"uid": "github/zhangjunpeng411/SCOM", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/SCOM", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/SCOM"}, {"uid": "github/zhangjunpeng411/Scan", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/Scan", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/Scan"}, {"uid": "github/dglaeser/gridformat", "html_url": "https://rseng.github.io/software/repository/github/dglaeser/gridformat", "api_url": "https://rseng.github.io/software/api/repos/github/dglaeser/gridformat"}, {"uid": "github/AdrianA-T/cytomorph", "html_url": "https://rseng.github.io/software/repository/github/AdrianA-T/cytomorph", "api_url": "https://rseng.github.io/software/api/repos/github/AdrianA-T/cytomorph"}, {"uid": "github/soerenslarsen/ISPy3", "html_url": "https://rseng.github.io/software/repository/github/soerenslarsen/ISPy3", "api_url": "https://rseng.github.io/software/api/repos/github/soerenslarsen/ISPy3"}, {"uid": "github/EOSC-LOFAR/lofar-ld", "html_url": "https://rseng.github.io/software/repository/github/EOSC-LOFAR/lofar-ld", "api_url": "https://rseng.github.io/software/api/repos/github/EOSC-LOFAR/lofar-ld"}, {"uid": "github/tinglabs/scAIDE", "html_url": "https://rseng.github.io/software/repository/github/tinglabs/scAIDE", "api_url": "https://rseng.github.io/software/api/repos/github/tinglabs/scAIDE"}, {"uid": "github/Zstone19/pypetal", "html_url": "https://rseng.github.io/software/repository/github/Zstone19/pypetal", "api_url": "https://rseng.github.io/software/api/repos/github/Zstone19/pypetal"}, {"uid": "github/wal-yan/target-methylseq-qc", "html_url": "https://rseng.github.io/software/repository/github/wal-yan/target-methylseq-qc", "api_url": "https://rseng.github.io/software/api/repos/github/wal-yan/target-methylseq-qc"}, {"uid": "github/agerada/AIgarMIC", "html_url": "https://rseng.github.io/software/repository/github/agerada/AIgarMIC", "api_url": "https://rseng.github.io/software/api/repos/github/agerada/AIgarMIC"}, {"uid": "github/Vini2/GraphBin", "html_url": "https://rseng.github.io/software/repository/github/Vini2/GraphBin", "api_url": "https://rseng.github.io/software/api/repos/github/Vini2/GraphBin"}, {"uid": "github/tkarwal/procoli", "html_url": "https://rseng.github.io/software/repository/github/tkarwal/procoli", "api_url": "https://rseng.github.io/software/api/repos/github/tkarwal/procoli"}, {"uid": "github/xuanxu/starmatrix", "html_url": "https://rseng.github.io/software/repository/github/xuanxu/starmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/xuanxu/starmatrix"}, {"uid": "github/swiftsim/swiftsimio", "html_url": "https://rseng.github.io/software/repository/github/swiftsim/swiftsimio", "api_url": "https://rseng.github.io/software/api/repos/github/swiftsim/swiftsimio"}, {"uid": "github/GATB/bcalm", "html_url": "https://rseng.github.io/software/repository/github/GATB/bcalm", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/bcalm"}, {"uid": "github/GATB/gatb-core", "html_url": "https://rseng.github.io/software/repository/github/GATB/gatb-core", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/gatb-core"}, {"uid": "github/GATB/MindTheGap", "html_url": "https://rseng.github.io/software/repository/github/GATB/MindTheGap", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/MindTheGap"}, {"uid": "github/GATB/simka", "html_url": "https://rseng.github.io/software/repository/github/GATB/simka", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/simka"}, {"uid": "github/mathjax/MathJax", "html_url": "https://rseng.github.io/software/repository/github/mathjax/MathJax", "api_url": "https://rseng.github.io/software/api/repos/github/mathjax/MathJax"}, {"uid": "github/oneilsh/tidytensor", "html_url": "https://rseng.github.io/software/repository/github/oneilsh/tidytensor", "api_url": "https://rseng.github.io/software/api/repos/github/oneilsh/tidytensor"}, {"uid": "github/PyTables/PyTables", "html_url": "https://rseng.github.io/software/repository/github/PyTables/PyTables", "api_url": "https://rseng.github.io/software/api/repos/github/PyTables/PyTables"}, {"uid": "github/optimusmoose/jsms", "html_url": "https://rseng.github.io/software/repository/github/optimusmoose/jsms", "api_url": "https://rseng.github.io/software/api/repos/github/optimusmoose/jsms"}, {"uid": "github/Griffan/VerifyBamID", "html_url": "https://rseng.github.io/software/repository/github/Griffan/VerifyBamID", "api_url": "https://rseng.github.io/software/api/repos/github/Griffan/VerifyBamID"}, {"uid": "github/Rocsg/FijiRelax", "html_url": "https://rseng.github.io/software/repository/github/Rocsg/FijiRelax", "api_url": "https://rseng.github.io/software/api/repos/github/Rocsg/FijiRelax"}, {"uid": "github/NeamulKabir/EnsembleFam", "html_url": "https://rseng.github.io/software/repository/github/NeamulKabir/EnsembleFam", "api_url": "https://rseng.github.io/software/api/repos/github/NeamulKabir/EnsembleFam"}, {"uid": "github/annehutter/polyspectrum", "html_url": "https://rseng.github.io/software/repository/github/annehutter/polyspectrum", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/polyspectrum"}, {"uid": "github/annehutter/grid-model", "html_url": "https://rseng.github.io/software/repository/github/annehutter/grid-model", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/grid-model"}, {"uid": "github/annehutter/astraeus", "html_url": "https://rseng.github.io/software/repository/github/annehutter/astraeus", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/astraeus"}, {"uid": "github/s-will/LocARNA", "html_url": "https://rseng.github.io/software/repository/github/s-will/LocARNA", "api_url": "https://rseng.github.io/software/api/repos/github/s-will/LocARNA"}, {"uid": "github/seclark/RHT", "html_url": "https://rseng.github.io/software/repository/github/seclark/RHT", "api_url": "https://rseng.github.io/software/api/repos/github/seclark/RHT"}, {"uid": "github/tdaylan/pcat", "html_url": "https://rseng.github.io/software/repository/github/tdaylan/pcat", "api_url": "https://rseng.github.io/software/api/repos/github/tdaylan/pcat"}, {"uid": "github/heatherprince/cosmoped", "html_url": "https://rseng.github.io/software/repository/github/heatherprince/cosmoped", "api_url": "https://rseng.github.io/software/api/repos/github/heatherprince/cosmoped"}, {"uid": "github/TheJacksonLaboratory/SvAnn", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/SvAnn", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/SvAnn"}, {"uid": "github/TheJacksonLaboratory/drug-synergy", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/drug-synergy", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/drug-synergy"}, {"uid": "github/jbrakensiek/CORBITS", "html_url": "https://rseng.github.io/software/repository/github/jbrakensiek/CORBITS", "api_url": "https://rseng.github.io/software/api/repos/github/jbrakensiek/CORBITS"}, {"uid": "github/JuliaHealth/NeuroAnalyzer.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHealth/NeuroAnalyzer.jl"}, {"uid": "github/vprusso/toqito", "html_url": "https://rseng.github.io/software/repository/github/vprusso/toqito", "api_url": "https://rseng.github.io/software/api/repos/github/vprusso/toqito"}, {"uid": "github/savila/halogen", "html_url": "https://rseng.github.io/software/repository/github/savila/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/savila/halogen"}, {"uid": "github/iric-soft/km", "html_url": "https://rseng.github.io/software/repository/github/iric-soft/km", "api_url": "https://rseng.github.io/software/api/repos/github/iric-soft/km"}, {"uid": "github/tanner-trickle/EXCEED-DM", "html_url": "https://rseng.github.io/software/repository/github/tanner-trickle/EXCEED-DM", "api_url": "https://rseng.github.io/software/api/repos/github/tanner-trickle/EXCEED-DM"}, {"uid": "github/eltevo/steps", "html_url": "https://rseng.github.io/software/repository/github/eltevo/steps", "api_url": "https://rseng.github.io/software/api/repos/github/eltevo/steps"}, {"uid": "github/clemson-cal/sailfish", "html_url": "https://rseng.github.io/software/repository/github/clemson-cal/sailfish", "api_url": "https://rseng.github.io/software/api/repos/github/clemson-cal/sailfish"}, {"uid": "github/tekpinar/correlationplus", "html_url": "https://rseng.github.io/software/repository/github/tekpinar/correlationplus", "api_url": "https://rseng.github.io/software/api/repos/github/tekpinar/correlationplus"}, {"uid": "github/mfruzan/HaploMaker", "html_url": "https://rseng.github.io/software/repository/github/mfruzan/HaploMaker", "api_url": "https://rseng.github.io/software/api/repos/github/mfruzan/HaploMaker"}, {"uid": "github/codidact/qpixel", "html_url": "https://rseng.github.io/software/repository/github/codidact/qpixel", "api_url": "https://rseng.github.io/software/api/repos/github/codidact/qpixel"}, {"uid": "github/bempp/bempp-cl", "html_url": "https://rseng.github.io/software/repository/github/bempp/bempp-cl", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/bempp-cl"}, {"uid": "github/bempp/kifmm", "html_url": "https://rseng.github.io/software/repository/github/bempp/kifmm", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/kifmm"}, {"uid": "github/montilab/nf-gwas-pipeline", "html_url": "https://rseng.github.io/software/repository/github/montilab/nf-gwas-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/montilab/nf-gwas-pipeline"}, {"uid": "github/GRIT-RBSim/GRIT", "html_url": "https://rseng.github.io/software/repository/github/GRIT-RBSim/GRIT", "api_url": "https://rseng.github.io/software/api/repos/github/GRIT-RBSim/GRIT"}, {"uid": "github/grd349/PBjam", "html_url": "https://rseng.github.io/software/repository/github/grd349/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/grd349/PBjam"}, {"uid": "github/bayzidlab/SAINT-Angle", "html_url": "https://rseng.github.io/software/repository/github/bayzidlab/SAINT-Angle", "api_url": "https://rseng.github.io/software/api/repos/github/bayzidlab/SAINT-Angle"}, {"uid": "github/DSIMB/medusa", "html_url": "https://rseng.github.io/software/repository/github/DSIMB/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/DSIMB/medusa"}, {"uid": "github/atakan/KeplerSolver", "html_url": "https://rseng.github.io/software/repository/github/atakan/KeplerSolver", "api_url": "https://rseng.github.io/software/api/repos/github/atakan/KeplerSolver"}, {"uid": "github/ACCarnall/SpectRes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/SpectRes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/SpectRes"}, {"uid": "github/ACCarnall/bagpipes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/bagpipes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/bagpipes"}, {"uid": "github/uwssg/APS", "html_url": "https://rseng.github.io/software/repository/github/uwssg/APS", "api_url": "https://rseng.github.io/software/api/repos/github/uwssg/APS"}, {"uid": "github/IndrajeetPatil/statsExpressions", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/statsExpressions", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/statsExpressions"}, {"uid": "github/IndrajeetPatil/ggstatsplot", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/ggstatsplot", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/ggstatsplot"}, {"uid": "github/chenzhaiyu/abspy", "html_url": "https://rseng.github.io/software/repository/github/chenzhaiyu/abspy", "api_url": "https://rseng.github.io/software/api/repos/github/chenzhaiyu/abspy"}, {"uid": "github/genotoul-bioinfo/Binette", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/Binette", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/Binette"}, {"uid": "github/genotoul-bioinfo/dgenies", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/dgenies", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/dgenies"}, {"uid": "github/gwpy/gwpy", "html_url": "https://rseng.github.io/software/repository/github/gwpy/gwpy", "api_url": "https://rseng.github.io/software/api/repos/github/gwpy/gwpy"}, {"uid": "github/ManuelBehrendt/Mera.jl", "html_url": "https://rseng.github.io/software/repository/github/ManuelBehrendt/Mera.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelBehrendt/Mera.jl"}, {"uid": "github/RamanLab/iCOMIC", "html_url": "https://rseng.github.io/software/repository/github/RamanLab/iCOMIC", "api_url": "https://rseng.github.io/software/api/repos/github/RamanLab/iCOMIC"}, {"uid": "github/meganmansfield/IGRINS_transit", "html_url": "https://rseng.github.io/software/repository/github/meganmansfield/IGRINS_transit", "api_url": "https://rseng.github.io/software/api/repos/github/meganmansfield/IGRINS_transit"}, {"uid": "github/emunte/vaRHC", "html_url": "https://rseng.github.io/software/repository/github/emunte/vaRHC", "api_url": "https://rseng.github.io/software/api/repos/github/emunte/vaRHC"}, {"uid": "github/jameschapman19/cca_zoo", "html_url": "https://rseng.github.io/software/repository/github/jameschapman19/cca_zoo", "api_url": "https://rseng.github.io/software/api/repos/github/jameschapman19/cca_zoo"}, {"uid": "github/FunctionalUrology/MLcps", "html_url": "https://rseng.github.io/software/repository/github/FunctionalUrology/MLcps", "api_url": "https://rseng.github.io/software/api/repos/github/FunctionalUrology/MLcps"}, {"uid": "github/CBIIT-CGBB/gcMECM", "html_url": "https://rseng.github.io/software/repository/github/CBIIT-CGBB/gcMECM", "api_url": "https://rseng.github.io/software/api/repos/github/CBIIT-CGBB/gcMECM"}, {"uid": "github/niosh-mining/obsplus", "html_url": "https://rseng.github.io/software/repository/github/niosh-mining/obsplus", "api_url": "https://rseng.github.io/software/api/repos/github/niosh-mining/obsplus"}, {"uid": "github/conda-forge/conda-smithy", "html_url": "https://rseng.github.io/software/repository/github/conda-forge/conda-smithy", "api_url": "https://rseng.github.io/software/api/repos/github/conda-forge/conda-smithy"}, {"uid": "github/iopenshell/ezSpectrum", "html_url": "https://rseng.github.io/software/repository/github/iopenshell/ezSpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/iopenshell/ezSpectrum"}, {"uid": "github/C-Briddon/SELCIE", "html_url": "https://rseng.github.io/software/repository/github/C-Briddon/SELCIE", "api_url": "https://rseng.github.io/software/api/repos/github/C-Briddon/SELCIE"}, {"uid": "github/rzellem/EXOTIC", "html_url": "https://rseng.github.io/software/repository/github/rzellem/EXOTIC", "api_url": "https://rseng.github.io/software/api/repos/github/rzellem/EXOTIC"}, {"uid": "github/drzeeshanahmed/JWES-Visual", "html_url": "https://rseng.github.io/software/repository/github/drzeeshanahmed/JWES-Visual", "api_url": "https://rseng.github.io/software/api/repos/github/drzeeshanahmed/JWES-Visual"}, {"uid": "github/OceanParcels/plasticparcels", "html_url": "https://rseng.github.io/software/repository/github/OceanParcels/plasticparcels", "api_url": "https://rseng.github.io/software/api/repos/github/OceanParcels/plasticparcels"}, {"uid": "github/gmzsebastian/FLEET", "html_url": "https://rseng.github.io/software/repository/github/gmzsebastian/FLEET", "api_url": "https://rseng.github.io/software/api/repos/github/gmzsebastian/FLEET"}, {"uid": "github/LucyMcGowan/tipr", "html_url": "https://rseng.github.io/software/repository/github/LucyMcGowan/tipr", "api_url": "https://rseng.github.io/software/api/repos/github/LucyMcGowan/tipr"}, {"uid": "github/klee/klee", "html_url": "https://rseng.github.io/software/repository/github/klee/klee", "api_url": "https://rseng.github.io/software/api/repos/github/klee/klee"}, {"uid": "github/opencollab/arpack-ng", "html_url": "https://rseng.github.io/software/repository/github/opencollab/arpack-ng", "api_url": "https://rseng.github.io/software/api/repos/github/opencollab/arpack-ng"}, {"uid": "github/Cantera/cantera", "html_url": "https://rseng.github.io/software/repository/github/Cantera/cantera", "api_url": "https://rseng.github.io/software/api/repos/github/Cantera/cantera"}, {"uid": "github/mikessh/vdjtools", "html_url": "https://rseng.github.io/software/repository/github/mikessh/vdjtools", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/vdjtools"}, {"uid": "github/mikessh/oncofuse", "html_url": "https://rseng.github.io/software/repository/github/mikessh/oncofuse", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/oncofuse"}, {"uid": "github/DTsuna/binary_precursor", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/binary_precursor", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/binary_precursor"}, {"uid": "github/DTsuna/CHIPS", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/CHIPS", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/CHIPS"}, {"uid": "github/Shyentist/fish-r-man", "html_url": "https://rseng.github.io/software/repository/github/Shyentist/fish-r-man", "api_url": "https://rseng.github.io/software/api/repos/github/Shyentist/fish-r-man"}, {"uid": "github/emhuff/Balrog", "html_url": "https://rseng.github.io/software/repository/github/emhuff/Balrog", "api_url": "https://rseng.github.io/software/api/repos/github/emhuff/Balrog"}, {"uid": "github/metageni/FOCUS", "html_url": "https://rseng.github.io/software/repository/github/metageni/FOCUS", "api_url": "https://rseng.github.io/software/api/repos/github/metageni/FOCUS"}, {"uid": "github/rhyspoulton/WhereWolf", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/WhereWolf", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/WhereWolf"}, {"uid": "github/rhyspoulton/OrbWeaver", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/OrbWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/OrbWeaver"}, {"uid": "github/exafmm/exafmm-t", "html_url": "https://rseng.github.io/software/repository/github/exafmm/exafmm-t", "api_url": "https://rseng.github.io/software/api/repos/github/exafmm/exafmm-t"}, {"uid": "github/SCECcode/pycsep", "html_url": "https://rseng.github.io/software/repository/github/SCECcode/pycsep", "api_url": "https://rseng.github.io/software/api/repos/github/SCECcode/pycsep"}, {"uid": "github/sonny-harman/snowball", "html_url": "https://rseng.github.io/software/repository/github/sonny-harman/snowball", "api_url": "https://rseng.github.io/software/api/repos/github/sonny-harman/snowball"}, {"uid": "github/Huang-CL/Magrathea", "html_url": "https://rseng.github.io/software/repository/github/Huang-CL/Magrathea", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-CL/Magrathea"}, {"uid": "github/jakobherpich/pyICs", "html_url": "https://rseng.github.io/software/repository/github/jakobherpich/pyICs", "api_url": "https://rseng.github.io/software/api/repos/github/jakobherpich/pyICs"}, {"uid": "github/HajkD/LTRpred", "html_url": "https://rseng.github.io/software/repository/github/HajkD/LTRpred", "api_url": "https://rseng.github.io/software/api/repos/github/HajkD/LTRpred"}, {"uid": "github/jydu/maffilter", "html_url": "https://rseng.github.io/software/repository/github/jydu/maffilter", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/maffilter"}, {"uid": "github/jydu/physamp", "html_url": "https://rseng.github.io/software/repository/github/jydu/physamp", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/physamp"}, {"uid": "github/xinglunju/pyAmor", "html_url": "https://rseng.github.io/software/repository/github/xinglunju/pyAmor", "api_url": "https://rseng.github.io/software/api/repos/github/xinglunju/pyAmor"}, {"uid": "github/sonwell/biotools", "html_url": "https://rseng.github.io/software/repository/github/sonwell/biotools", "api_url": "https://rseng.github.io/software/api/repos/github/sonwell/biotools"}, {"uid": "github/kernsuite-debian/parseltongue", "html_url": "https://rseng.github.io/software/repository/github/kernsuite-debian/parseltongue", "api_url": "https://rseng.github.io/software/api/repos/github/kernsuite-debian/parseltongue"}, {"uid": "github/AgrDataSci/climatrends", "html_url": "https://rseng.github.io/software/repository/github/AgrDataSci/climatrends", "api_url": "https://rseng.github.io/software/api/repos/github/AgrDataSci/climatrends"}, {"uid": "github/H-E-L-P/XID_plus", "html_url": "https://rseng.github.io/software/repository/github/H-E-L-P/XID_plus", "api_url": "https://rseng.github.io/software/api/repos/github/H-E-L-P/XID_plus"}, {"uid": "github/cbottrell/RealSim", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/RealSim", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/RealSim"}, {"uid": "github/cbottrell/realsim_ifs", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/realsim_ifs", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/realsim_ifs"}, {"uid": "github/sneumann/xcms", "html_url": "https://rseng.github.io/software/repository/github/sneumann/xcms", "api_url": "https://rseng.github.io/software/api/repos/github/sneumann/xcms"}, {"uid": "github/hpgem/nanomesh", "html_url": "https://rseng.github.io/software/repository/github/hpgem/nanomesh", "api_url": "https://rseng.github.io/software/api/repos/github/hpgem/nanomesh"}, {"uid": "github/theislab/cellrank", "html_url": "https://rseng.github.io/software/repository/github/theislab/cellrank", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/cellrank"}, {"uid": "github/theislab/scCODA", "html_url": "https://rseng.github.io/software/repository/github/theislab/scCODA", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scCODA"}, {"uid": "github/theislab/scanpy", "html_url": "https://rseng.github.io/software/repository/github/theislab/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scanpy"}, {"uid": "github/theislab/anndata2ri", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata2ri", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata2ri"}, {"uid": "github/theislab/anndata", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata"}, {"uid": "github/theislab/scvelo", "html_url": "https://rseng.github.io/software/repository/github/theislab/scvelo", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scvelo"}, {"uid": "github/atomec-project/atoMEC", "html_url": "https://rseng.github.io/software/repository/github/atomec-project/atoMEC", "api_url": "https://rseng.github.io/software/api/repos/github/atomec-project/atoMEC"}, {"uid": "github/unibe-icelab/thz-image-explorer", "html_url": "https://rseng.github.io/software/repository/github/unibe-icelab/thz-image-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/unibe-icelab/thz-image-explorer"}, {"uid": "github/Hoohm/CITE-seq-Count", "html_url": "https://rseng.github.io/software/repository/github/Hoohm/CITE-seq-Count", "api_url": "https://rseng.github.io/software/api/repos/github/Hoohm/CITE-seq-Count"}, {"uid": "github/Social-Evolution-and-Behavior/anTraX", "html_url": "https://rseng.github.io/software/repository/github/Social-Evolution-and-Behavior/anTraX", "api_url": "https://rseng.github.io/software/api/repos/github/Social-Evolution-and-Behavior/anTraX"}, {"uid": "github/JuBiotech/peak-performance", "html_url": "https://rseng.github.io/software/repository/github/JuBiotech/peak-performance", "api_url": "https://rseng.github.io/software/api/repos/github/JuBiotech/peak-performance"}, {"uid": "github/ronshnapp/MyPTV", "html_url": "https://rseng.github.io/software/repository/github/ronshnapp/MyPTV", "api_url": "https://rseng.github.io/software/api/repos/github/ronshnapp/MyPTV"}, {"uid": "github/aikubo/LinkingLines", "html_url": "https://rseng.github.io/software/repository/github/aikubo/LinkingLines", "api_url": "https://rseng.github.io/software/api/repos/github/aikubo/LinkingLines"}, {"uid": "github/nithyanandan/PRISim", "html_url": "https://rseng.github.io/software/repository/github/nithyanandan/PRISim", "api_url": "https://rseng.github.io/software/api/repos/github/nithyanandan/PRISim"}, {"uid": "github/cau-se/ARCHES-PiCar-X", "html_url": "https://rseng.github.io/software/repository/github/cau-se/ARCHES-PiCar-X", "api_url": "https://rseng.github.io/software/api/repos/github/cau-se/ARCHES-PiCar-X"}, {"uid": "github/hibridon/hibridon", "html_url": "https://rseng.github.io/software/repository/github/hibridon/hibridon", "api_url": "https://rseng.github.io/software/api/repos/github/hibridon/hibridon"}, {"uid": "github/radiosunpy/RadioSunPy", "html_url": "https://rseng.github.io/software/repository/github/radiosunpy/RadioSunPy", "api_url": "https://rseng.github.io/software/api/repos/github/radiosunpy/RadioSunPy"}, {"uid": "github/KerryAM-R/ggVolcanoR", "html_url": "https://rseng.github.io/software/repository/github/KerryAM-R/ggVolcanoR", "api_url": "https://rseng.github.io/software/api/repos/github/KerryAM-R/ggVolcanoR"}, {"uid": "github/moranegg/AffectationRO", "html_url": "https://rseng.github.io/software/repository/github/moranegg/AffectationRO", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/AffectationRO"}, {"uid": "github/moranegg/deposit-template", "html_url": "https://rseng.github.io/software/repository/github/moranegg/deposit-template", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/deposit-template"}, {"uid": "github/antwiser/ChemFH", "html_url": "https://rseng.github.io/software/repository/github/antwiser/ChemFH", "api_url": "https://rseng.github.io/software/api/repos/github/antwiser/ChemFH"}, {"uid": "github/PynPoint/PynPoint", "html_url": "https://rseng.github.io/software/repository/github/PynPoint/PynPoint", "api_url": "https://rseng.github.io/software/api/repos/github/PynPoint/PynPoint"}, {"uid": "github/secimTools/SECIMTools", "html_url": "https://rseng.github.io/software/repository/github/secimTools/SECIMTools", "api_url": "https://rseng.github.io/software/api/repos/github/secimTools/SECIMTools"}, {"uid": "github/comp-phys-marc/qasm-ts", "html_url": "https://rseng.github.io/software/repository/github/comp-phys-marc/qasm-ts", "api_url": "https://rseng.github.io/software/api/repos/github/comp-phys-marc/qasm-ts"}, {"uid": "github/staphopia/staphopia-paper", "html_url": "https://rseng.github.io/software/repository/github/staphopia/staphopia-paper", "api_url": "https://rseng.github.io/software/api/repos/github/staphopia/staphopia-paper"}, {"uid": "github/chklovski/CheckM2", "html_url": "https://rseng.github.io/software/repository/github/chklovski/CheckM2", "api_url": "https://rseng.github.io/software/api/repos/github/chklovski/CheckM2"}, {"uid": "github/sina-cb/Tn-seqExplorer", "html_url": "https://rseng.github.io/software/repository/github/sina-cb/Tn-seqExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/sina-cb/Tn-seqExplorer"}, {"uid": "github/abelson-lab/smMIP-tools", "html_url": "https://rseng.github.io/software/repository/github/abelson-lab/smMIP-tools", "api_url": "https://rseng.github.io/software/api/repos/github/abelson-lab/smMIP-tools"}, {"uid": "github/MarioRomeroC/Mixclask", "html_url": "https://rseng.github.io/software/repository/github/MarioRomeroC/Mixclask", "api_url": "https://rseng.github.io/software/api/repos/github/MarioRomeroC/Mixclask"}, {"uid": "github/amusecode/TRES", "html_url": "https://rseng.github.io/software/repository/github/amusecode/TRES", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/TRES"}, {"uid": "github/amusecode/amuse", "html_url": "https://rseng.github.io/software/repository/github/amusecode/amuse", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/amuse"}, {"uid": "github/palumbom/grass", "html_url": "https://rseng.github.io/software/repository/github/palumbom/grass", "api_url": "https://rseng.github.io/software/api/repos/github/palumbom/grass"}, {"uid": "github/PyTomography/slicer_spect_recon", "html_url": "https://rseng.github.io/software/repository/github/PyTomography/slicer_spect_recon", "api_url": "https://rseng.github.io/software/api/repos/github/PyTomography/slicer_spect_recon"}, {"uid": "github/obertscheiderfhwn/RTMsim", "html_url": "https://rseng.github.io/software/repository/github/obertscheiderfhwn/RTMsim", "api_url": "https://rseng.github.io/software/api/repos/github/obertscheiderfhwn/RTMsim"}, {"uid": "github/csb-toolbox/CSB", "html_url": "https://rseng.github.io/software/repository/github/csb-toolbox/CSB", "api_url": "https://rseng.github.io/software/api/repos/github/csb-toolbox/CSB"}, {"uid": "github/ireis/PRF", "html_url": "https://rseng.github.io/software/repository/github/ireis/PRF", "api_url": "https://rseng.github.io/software/api/repos/github/ireis/PRF"}, {"uid": "github/cassidymwagner/fluidsf", "html_url": "https://rseng.github.io/software/repository/github/cassidymwagner/fluidsf", "api_url": "https://rseng.github.io/software/api/repos/github/cassidymwagner/fluidsf"}, {"uid": "github/afd-illinois/grim", "html_url": "https://rseng.github.io/software/repository/github/afd-illinois/grim", "api_url": "https://rseng.github.io/software/api/repos/github/afd-illinois/grim"}, {"uid": "github/BenitoFar/NestedComBat", "html_url": "https://rseng.github.io/software/repository/github/BenitoFar/NestedComBat", "api_url": "https://rseng.github.io/software/api/repos/github/BenitoFar/NestedComBat"}, {"uid": "github/craddis1/MathWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/MathWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/MathWAP"}, {"uid": "github/craddis1/CosmoWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/CosmoWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/CosmoWAP"}, {"uid": "github/ngltr/sinaps", "html_url": "https://rseng.github.io/software/repository/github/ngltr/sinaps", "api_url": "https://rseng.github.io/software/api/repos/github/ngltr/sinaps"}, {"uid": "github/genialis/RNAnorm", "html_url": "https://rseng.github.io/software/repository/github/genialis/RNAnorm", "api_url": "https://rseng.github.io/software/api/repos/github/genialis/RNAnorm"}, {"uid": "github/margudo/LSSGALPY", "html_url": "https://rseng.github.io/software/repository/github/margudo/LSSGALPY", "api_url": "https://rseng.github.io/software/api/repos/github/margudo/LSSGALPY"}, {"uid": "github/vsoch/gridtest", "html_url": "https://rseng.github.io/software/repository/github/vsoch/gridtest", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/gridtest"}, {"uid": "github/vsoch/citelang", "html_url": "https://rseng.github.io/software/repository/github/vsoch/citelang", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/citelang"}, {"uid": "github/NumericalMathematics/PositiveIntegrators.jl", "html_url": "https://rseng.github.io/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/NumericalMathematics/PositiveIntegrators.jl"}, {"uid": "github/cmgcds/fastvpinns", "html_url": "https://rseng.github.io/software/repository/github/cmgcds/fastvpinns", "api_url": "https://rseng.github.io/software/api/repos/github/cmgcds/fastvpinns"}, {"uid": "github/Astroua/SCIMES", "html_url": "https://rseng.github.io/software/repository/github/Astroua/SCIMES", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/SCIMES"}, {"uid": "github/Astroua/TurbuStat", "html_url": "https://rseng.github.io/software/repository/github/Astroua/TurbuStat", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/TurbuStat"}, {"uid": "github/numba/numba", "html_url": "https://rseng.github.io/software/repository/github/numba/numba", "api_url": "https://rseng.github.io/software/api/repos/github/numba/numba"}, {"uid": "github/sapearson/HSS", "html_url": "https://rseng.github.io/software/repository/github/sapearson/HSS", "api_url": "https://rseng.github.io/software/api/repos/github/sapearson/HSS"}, {"uid": "github/ewanbarr/peasoup", "html_url": "https://rseng.github.io/software/repository/github/ewanbarr/peasoup", "api_url": "https://rseng.github.io/software/api/repos/github/ewanbarr/peasoup"}, {"uid": "github/jepegit/cellpy", "html_url": "https://rseng.github.io/software/repository/github/jepegit/cellpy", "api_url": "https://rseng.github.io/software/api/repos/github/jepegit/cellpy"}, {"uid": "github/yangyongsan-bio/GREAP", "html_url": "https://rseng.github.io/software/repository/github/yangyongsan-bio/GREAP", "api_url": "https://rseng.github.io/software/api/repos/github/yangyongsan-bio/GREAP"}, {"uid": "github/maxmahlke/ssos", "html_url": "https://rseng.github.io/software/repository/github/maxmahlke/ssos", "api_url": "https://rseng.github.io/software/api/repos/github/maxmahlke/ssos"}, {"uid": "github/Ayuei/DeBEIR", "html_url": "https://rseng.github.io/software/repository/github/Ayuei/DeBEIR", "api_url": "https://rseng.github.io/software/api/repos/github/Ayuei/DeBEIR"}, {"uid": "github/JDabringhausen/BiPoS1", "html_url": "https://rseng.github.io/software/repository/github/JDabringhausen/BiPoS1", "api_url": "https://rseng.github.io/software/api/repos/github/JDabringhausen/BiPoS1"}, {"uid": "github/piernik-dev/piernik", "html_url": "https://rseng.github.io/software/repository/github/piernik-dev/piernik", "api_url": "https://rseng.github.io/software/api/repos/github/piernik-dev/piernik"}, {"uid": "github/parafields/parafields", "html_url": "https://rseng.github.io/software/repository/github/parafields/parafields", "api_url": "https://rseng.github.io/software/api/repos/github/parafields/parafields"}, {"uid": "github/andrewmoore73/SourceDetect", "html_url": "https://rseng.github.io/software/repository/github/andrewmoore73/SourceDetect", "api_url": "https://rseng.github.io/software/api/repos/github/andrewmoore73/SourceDetect"}, {"uid": "github/jdonnert/WVTICs", "html_url": "https://rseng.github.io/software/repository/github/jdonnert/WVTICs", "api_url": "https://rseng.github.io/software/api/repos/github/jdonnert/WVTICs"}, {"uid": "github/mmollina/viewpoly", "html_url": "https://rseng.github.io/software/repository/github/mmollina/viewpoly", "api_url": "https://rseng.github.io/software/api/repos/github/mmollina/viewpoly"}, {"uid": "github/gerddie/maxflow", "html_url": "https://rseng.github.io/software/repository/github/gerddie/maxflow", "api_url": "https://rseng.github.io/software/api/repos/github/gerddie/maxflow"}, {"uid": "github/dstndstn/tractor", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/tractor", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/tractor"}, {"uid": "github/dstndstn/astrometry.net", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/astrometry.net", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/astrometry.net"}, {"uid": "github/bwoshea/ZEUS-MP_2", "html_url": "https://rseng.github.io/software/repository/github/bwoshea/ZEUS-MP_2", "api_url": "https://rseng.github.io/software/api/repos/github/bwoshea/ZEUS-MP_2"}, {"uid": "github/Jonathanfreundlich/CuspCore", "html_url": "https://rseng.github.io/software/repository/github/Jonathanfreundlich/CuspCore", "api_url": "https://rseng.github.io/software/api/repos/github/Jonathanfreundlich/CuspCore"}, {"uid": "github/dgrin1/axionCAMB", "html_url": "https://rseng.github.io/software/repository/github/dgrin1/axionCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/dgrin1/axionCAMB"}, {"uid": "github/biaslab/RxInfer.jl", "html_url": "https://rseng.github.io/software/repository/github/biaslab/RxInfer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/biaslab/RxInfer.jl"}, {"uid": "github/SihaoCheng/WD_models", "html_url": "https://rseng.github.io/software/repository/github/SihaoCheng/WD_models", "api_url": "https://rseng.github.io/software/api/repos/github/SihaoCheng/WD_models"}, {"uid": "github/DessimozLab/omamer", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/omamer", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/omamer"}, {"uid": "github/DessimozLab/read2tree", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/read2tree", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/read2tree"}, {"uid": "github/tcassanelli/pywpf", "html_url": "https://rseng.github.io/software/repository/github/tcassanelli/pywpf", "api_url": "https://rseng.github.io/software/api/repos/github/tcassanelli/pywpf"}, {"uid": "github/neuralhydrology/neuralhydrology", "html_url": "https://rseng.github.io/software/repository/github/neuralhydrology/neuralhydrology", "api_url": "https://rseng.github.io/software/api/repos/github/neuralhydrology/neuralhydrology"}, {"uid": "github/nekokoe/Plasmer", "html_url": "https://rseng.github.io/software/repository/github/nekokoe/Plasmer", "api_url": "https://rseng.github.io/software/api/repos/github/nekokoe/Plasmer"}, {"uid": "github/JLSteenwyk/ggpubfigs", "html_url": "https://rseng.github.io/software/repository/github/JLSteenwyk/ggpubfigs", "api_url": "https://rseng.github.io/software/api/repos/github/JLSteenwyk/ggpubfigs"}, {"uid": "github/amromics/panta", "html_url": "https://rseng.github.io/software/repository/github/amromics/panta", "api_url": "https://rseng.github.io/software/api/repos/github/amromics/panta"}, {"uid": "github/PMBio/peer", "html_url": "https://rseng.github.io/software/repository/github/PMBio/peer", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/peer"}, {"uid": "github/PMBio/spatialde2-paper", "html_url": "https://rseng.github.io/software/repository/github/PMBio/spatialde2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/spatialde2-paper"}, {"uid": "github/mmahmoudian/sivs", "html_url": "https://rseng.github.io/software/repository/github/mmahmoudian/sivs", "api_url": "https://rseng.github.io/software/api/repos/github/mmahmoudian/sivs"}, {"uid": "github/EbmeyerSt/GEnView", "html_url": "https://rseng.github.io/software/repository/github/EbmeyerSt/GEnView", "api_url": "https://rseng.github.io/software/api/repos/github/EbmeyerSt/GEnView"}, {"uid": "github/entangled/entangled", "html_url": "https://rseng.github.io/software/repository/github/entangled/entangled", "api_url": "https://rseng.github.io/software/api/repos/github/entangled/entangled"}, {"uid": "github/otvam/pypeec", "html_url": "https://rseng.github.io/software/repository/github/otvam/pypeec", "api_url": "https://rseng.github.io/software/api/repos/github/otvam/pypeec"}, {"uid": "github/tkonolige/city2ba", "html_url": "https://rseng.github.io/software/repository/github/tkonolige/city2ba", "api_url": "https://rseng.github.io/software/api/repos/github/tkonolige/city2ba"}, {"uid": "github/BobAubouin/Python_Anesthesia_Simulator", "html_url": "https://rseng.github.io/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/BobAubouin/Python_Anesthesia_Simulator"}, {"uid": "github/utrillalab/repromin", "html_url": "https://rseng.github.io/software/repository/github/utrillalab/repromin", "api_url": "https://rseng.github.io/software/api/repos/github/utrillalab/repromin"}, {"uid": "github/cblearn/cblearn", "html_url": "https://rseng.github.io/software/repository/github/cblearn/cblearn", "api_url": "https://rseng.github.io/software/api/repos/github/cblearn/cblearn"}, {"uid": "github/karpov-sv/stdweb", "html_url": "https://rseng.github.io/software/repository/github/karpov-sv/stdweb", "api_url": "https://rseng.github.io/software/api/repos/github/karpov-sv/stdweb"}, {"uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "html_url": "https://rseng.github.io/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "api_url": "https://rseng.github.io/software/api/repos/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark"}, {"uid": "github/GeminiDRSoftware/DRAGONS", "html_url": "https://rseng.github.io/software/repository/github/GeminiDRSoftware/DRAGONS", "api_url": "https://rseng.github.io/software/api/repos/github/GeminiDRSoftware/DRAGONS"}, {"uid": "github/seqcode/allo", "html_url": "https://rseng.github.io/software/repository/github/seqcode/allo", "api_url": "https://rseng.github.io/software/api/repos/github/seqcode/allo"}, {"uid": "github/MrShoenel/metrics-as-scores", "html_url": "https://rseng.github.io/software/repository/github/MrShoenel/metrics-as-scores", "api_url": "https://rseng.github.io/software/api/repos/github/MrShoenel/metrics-as-scores"}, {"uid": "github/tidyverse/glue", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/glue", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/glue"}, {"uid": "github/tidyverse/ggplot2", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/ggplot2", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/ggplot2"}, {"uid": "github/learningsimulator/learningsimulator", "html_url": "https://rseng.github.io/software/repository/github/learningsimulator/learningsimulator", "api_url": "https://rseng.github.io/software/api/repos/github/learningsimulator/learningsimulator"}, {"uid": "github/GalSim-developers/GalSim", "html_url": "https://rseng.github.io/software/repository/github/GalSim-developers/GalSim", "api_url": "https://rseng.github.io/software/api/repos/github/GalSim-developers/GalSim"}, {"uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "html_url": "https://rseng.github.io/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "api_url": "https://rseng.github.io/software/api/repos/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework"}, {"uid": "github/prmunday/Immunolyser", "html_url": "https://rseng.github.io/software/repository/github/prmunday/Immunolyser", "api_url": "https://rseng.github.io/software/api/repos/github/prmunday/Immunolyser"}, {"uid": "github/Astro-Sean/autophot", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/autophot", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/autophot"}, {"uid": "github/Astro-Sean/escatter", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/escatter", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/escatter"}, {"uid": "github/LMBooth/pybci", "html_url": "https://rseng.github.io/software/repository/github/LMBooth/pybci", "api_url": "https://rseng.github.io/software/api/repos/github/LMBooth/pybci"}, {"uid": "github/catherinezucker/radfil", "html_url": "https://rseng.github.io/software/repository/github/catherinezucker/radfil", "api_url": "https://rseng.github.io/software/api/repos/github/catherinezucker/radfil"}, {"uid": "github/XuhanLiu/DrugEx", "html_url": "https://rseng.github.io/software/repository/github/XuhanLiu/DrugEx", "api_url": "https://rseng.github.io/software/api/repos/github/XuhanLiu/DrugEx"}, {"uid": "github/Nadi-System/nadi-system", "html_url": "https://rseng.github.io/software/repository/github/Nadi-System/nadi-system", "api_url": "https://rseng.github.io/software/api/repos/github/Nadi-System/nadi-system"}, {"uid": "github/open2c/polychrom", "html_url": "https://rseng.github.io/software/repository/github/open2c/polychrom", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/polychrom"}, {"uid": "github/open2c/pairtools", "html_url": "https://rseng.github.io/software/repository/github/open2c/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/pairtools"}, {"uid": "github/roualdes/bridgestan", "html_url": "https://rseng.github.io/software/repository/github/roualdes/bridgestan", "api_url": "https://rseng.github.io/software/api/repos/github/roualdes/bridgestan"}, {"uid": "github/sosl/H-FISTA", "html_url": "https://rseng.github.io/software/repository/github/sosl/H-FISTA", "api_url": "https://rseng.github.io/software/api/repos/github/sosl/H-FISTA"}, {"uid": "github/choosehappy/HoverFast", "html_url": "https://rseng.github.io/software/repository/github/choosehappy/HoverFast", "api_url": "https://rseng.github.io/software/api/repos/github/choosehappy/HoverFast"}, {"uid": "github/richford/groupyr", "html_url": "https://rseng.github.io/software/repository/github/richford/groupyr", "api_url": "https://rseng.github.io/software/api/repos/github/richford/groupyr"}, {"uid": "github/espnet/espnet", "html_url": "https://rseng.github.io/software/repository/github/espnet/espnet", "api_url": "https://rseng.github.io/software/api/repos/github/espnet/espnet"}, {"uid": "github/astromb/PICsar2D", "html_url": "https://rseng.github.io/software/repository/github/astromb/PICsar2D", "api_url": "https://rseng.github.io/software/api/repos/github/astromb/PICsar2D"}, {"uid": "github/EliabCanul/nauyaca", "html_url": "https://rseng.github.io/software/repository/github/EliabCanul/nauyaca", "api_url": "https://rseng.github.io/software/api/repos/github/EliabCanul/nauyaca"}, {"uid": "github/UM-Bridge/umbridge", "html_url": "https://rseng.github.io/software/repository/github/UM-Bridge/umbridge", "api_url": "https://rseng.github.io/software/api/repos/github/UM-Bridge/umbridge"}, {"uid": "github/simonbesnard1/gedidb", "html_url": "https://rseng.github.io/software/repository/github/simonbesnard1/gedidb", "api_url": "https://rseng.github.io/software/api/repos/github/simonbesnard1/gedidb"}, {"uid": "github/wdpozzo/raynest", "html_url": "https://rseng.github.io/software/repository/github/wdpozzo/raynest", "api_url": "https://rseng.github.io/software/api/repos/github/wdpozzo/raynest"}, {"uid": "github/lutteropp/NetRAX", "html_url": "https://rseng.github.io/software/repository/github/lutteropp/NetRAX", "api_url": "https://rseng.github.io/software/api/repos/github/lutteropp/NetRAX"}, {"uid": "github/quadram-institute-bioscience/dadaist2", "html_url": "https://rseng.github.io/software/repository/github/quadram-institute-bioscience/dadaist2", "api_url": "https://rseng.github.io/software/api/repos/github/quadram-institute-bioscience/dadaist2"}, {"uid": "github/haoharryfeng/NeuCA", "html_url": "https://rseng.github.io/software/repository/github/haoharryfeng/NeuCA", "api_url": "https://rseng.github.io/software/api/repos/github/haoharryfeng/NeuCA"}, {"uid": "github/nbisweden/MrBayes", "html_url": "https://rseng.github.io/software/repository/github/nbisweden/MrBayes", "api_url": "https://rseng.github.io/software/api/repos/github/nbisweden/MrBayes"}, {"uid": "github/sashakolpakov/dire-jax", "html_url": "https://rseng.github.io/software/repository/github/sashakolpakov/dire-jax", "api_url": "https://rseng.github.io/software/api/repos/github/sashakolpakov/dire-jax"}, {"uid": "github/mjrfringes/haystacks", "html_url": "https://rseng.github.io/software/repository/github/mjrfringes/haystacks", "api_url": "https://rseng.github.io/software/api/repos/github/mjrfringes/haystacks"}, {"uid": "github/bbfrederick/stabilitycalc", "html_url": "https://rseng.github.io/software/repository/github/bbfrederick/stabilitycalc", "api_url": "https://rseng.github.io/software/api/repos/github/bbfrederick/stabilitycalc"}, {"uid": "github/semaphoreP/whereistheplanet", "html_url": "https://rseng.github.io/software/repository/github/semaphoreP/whereistheplanet", "api_url": "https://rseng.github.io/software/api/repos/github/semaphoreP/whereistheplanet"}, {"uid": "github/jamesrhester/Lerche.jl", "html_url": "https://rseng.github.io/software/repository/github/jamesrhester/Lerche.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jamesrhester/Lerche.jl"}, {"uid": "github/matteobreschi/bajes", "html_url": "https://rseng.github.io/software/repository/github/matteobreschi/bajes", "api_url": "https://rseng.github.io/software/api/repos/github/matteobreschi/bajes"}, {"uid": "github/rmjarvis/Piff", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/Piff", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/Piff"}, {"uid": "github/rmjarvis/TreeCorr", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/TreeCorr", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/TreeCorr"}, {"uid": "github/sieunhanbom04/support-exploration-matrix-factorization", "html_url": "https://rseng.github.io/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", "api_url": "https://rseng.github.io/software/api/repos/github/sieunhanbom04/support-exploration-matrix-factorization"}, {"uid": "github/thomgrand/fim-python", "html_url": "https://rseng.github.io/software/repository/github/thomgrand/fim-python", "api_url": "https://rseng.github.io/software/api/repos/github/thomgrand/fim-python"}, {"uid": "github/jgagneastro/CoMover", "html_url": "https://rseng.github.io/software/repository/github/jgagneastro/CoMover", "api_url": "https://rseng.github.io/software/api/repos/github/jgagneastro/CoMover"}, {"uid": "github/manzt/anywidget", "html_url": "https://rseng.github.io/software/repository/github/manzt/anywidget", "api_url": "https://rseng.github.io/software/api/repos/github/manzt/anywidget"}, {"uid": "github/LTeinturier/Cloud-Killer-", "html_url": "https://rseng.github.io/software/repository/github/LTeinturier/Cloud-Killer-", "api_url": "https://rseng.github.io/software/api/repos/github/LTeinturier/Cloud-Killer-"}, {"uid": "github/matthias-mayr/Cartesian-Impedance-Controller", "html_url": "https://rseng.github.io/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", "api_url": "https://rseng.github.io/software/api/repos/github/matthias-mayr/Cartesian-Impedance-Controller"}, {"uid": "github/TRIQS/solid_dmft", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/solid_dmft", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/solid_dmft"}, {"uid": "github/TRIQS/ctseg", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/ctseg", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/ctseg"}, {"uid": "github/ishinder/EASTR", "html_url": "https://rseng.github.io/software/repository/github/ishinder/EASTR", "api_url": "https://rseng.github.io/software/api/repos/github/ishinder/EASTR"}, {"uid": "github/herjy/SLIT", "html_url": "https://rseng.github.io/software/repository/github/herjy/SLIT", "api_url": "https://rseng.github.io/software/api/repos/github/herjy/SLIT"}, {"uid": "github/keurfonluu/toughio", "html_url": "https://rseng.github.io/software/repository/github/keurfonluu/toughio", "api_url": "https://rseng.github.io/software/api/repos/github/keurfonluu/toughio"}, {"uid": "github/OrchardLANL/DPFEHM.jl", "html_url": "https://rseng.github.io/software/repository/github/OrchardLANL/DPFEHM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OrchardLANL/DPFEHM.jl"}, {"uid": "github/OpenMD/OpenMD", "html_url": "https://rseng.github.io/software/repository/github/OpenMD/OpenMD", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMD/OpenMD"}, {"uid": "github/loneknightpy/idba", "html_url": "https://rseng.github.io/software/repository/github/loneknightpy/idba", "api_url": "https://rseng.github.io/software/api/repos/github/loneknightpy/idba"}, {"uid": "github/kadyb/rgugik", "html_url": "https://rseng.github.io/software/repository/github/kadyb/rgugik", "api_url": "https://rseng.github.io/software/api/repos/github/kadyb/rgugik"}, {"uid": "github/jjmccollum/teiphy", "html_url": "https://rseng.github.io/software/repository/github/jjmccollum/teiphy", "api_url": "https://rseng.github.io/software/api/repos/github/jjmccollum/teiphy"}, {"uid": "github/fluhus/blini", "html_url": "https://rseng.github.io/software/repository/github/fluhus/blini", "api_url": "https://rseng.github.io/software/api/repos/github/fluhus/blini"}, {"uid": "github/olivecha/guitarsounds", "html_url": "https://rseng.github.io/software/repository/github/olivecha/guitarsounds", "api_url": "https://rseng.github.io/software/api/repos/github/olivecha/guitarsounds"}, {"uid": "github/n-claes/legolas", "html_url": "https://rseng.github.io/software/repository/github/n-claes/legolas", "api_url": "https://rseng.github.io/software/api/repos/github/n-claes/legolas"}, {"uid": "github/masadcv/FastGeodis", "html_url": "https://rseng.github.io/software/repository/github/masadcv/FastGeodis", "api_url": "https://rseng.github.io/software/api/repos/github/masadcv/FastGeodis"}, {"uid": "github/BenWibking/quokka", "html_url": "https://rseng.github.io/software/repository/github/BenWibking/quokka", "api_url": "https://rseng.github.io/software/api/repos/github/BenWibking/quokka"}, {"uid": "github/jdidion/atropos", "html_url": "https://rseng.github.io/software/repository/github/jdidion/atropos", "api_url": "https://rseng.github.io/software/api/repos/github/jdidion/atropos"}, {"uid": "github/CodeEagle22/SIRITVIS", "html_url": "https://rseng.github.io/software/repository/github/CodeEagle22/SIRITVIS", "api_url": "https://rseng.github.io/software/api/repos/github/CodeEagle22/SIRITVIS"}, {"uid": "github/kostergroup/SIMsalabim", "html_url": "https://rseng.github.io/software/repository/github/kostergroup/SIMsalabim", "api_url": "https://rseng.github.io/software/api/repos/github/kostergroup/SIMsalabim"}, {"uid": "github/ahcm/ffindex", "html_url": "https://rseng.github.io/software/repository/github/ahcm/ffindex", "api_url": "https://rseng.github.io/software/api/repos/github/ahcm/ffindex"}, {"uid": "github/ClaudioZandonella/PRDA", "html_url": "https://rseng.github.io/software/repository/github/ClaudioZandonella/PRDA", "api_url": "https://rseng.github.io/software/api/repos/github/ClaudioZandonella/PRDA"}, {"uid": "github/cb-ge/ephor_wp4_agnostic_models", "html_url": "https://rseng.github.io/software/repository/github/cb-ge/ephor_wp4_agnostic_models", "api_url": "https://rseng.github.io/software/api/repos/github/cb-ge/ephor_wp4_agnostic_models"}, {"uid": "github/nlppln/nlppln", "html_url": "https://rseng.github.io/software/repository/github/nlppln/nlppln", "api_url": "https://rseng.github.io/software/api/repos/github/nlppln/nlppln"}, {"uid": "github/mwhosek/extlaw_H18", "html_url": "https://rseng.github.io/software/repository/github/mwhosek/extlaw_H18", "api_url": "https://rseng.github.io/software/api/repos/github/mwhosek/extlaw_H18"}, {"uid": "github/biomedia-mira/deepscm", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/deepscm", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/deepscm"}, {"uid": "github/biomedia-mira/masf", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/masf", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/masf"}, {"uid": "github/biomedia-mira/drop2", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/drop2", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/drop2"}, {"uid": "github/biomedia-mira/blast-ct", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/blast-ct", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/blast-ct"}, {"uid": "github/biomedia-mira/istn", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/istn", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/istn"}, {"uid": "github/holmescao/ANTS_marking_and_analysis_tools", "html_url": "https://rseng.github.io/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", "api_url": "https://rseng.github.io/software/api/repos/github/holmescao/ANTS_marking_and_analysis_tools"}, {"uid": "github/IPIS-XieLei/CNTSeg", "html_url": "https://rseng.github.io/software/repository/github/IPIS-XieLei/CNTSeg", "api_url": "https://rseng.github.io/software/api/repos/github/IPIS-XieLei/CNTSeg"}, {"uid": "github/KskAdch/TopologicalNumbers.jl", "html_url": "https://rseng.github.io/software/repository/github/KskAdch/TopologicalNumbers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/KskAdch/TopologicalNumbers.jl"}, {"uid": "github/jdiasn/lidarSuit", "html_url": "https://rseng.github.io/software/repository/github/jdiasn/lidarSuit", "api_url": "https://rseng.github.io/software/api/repos/github/jdiasn/lidarSuit"}, {"uid": "github/DistrictDataLabs/yellowbrick", "html_url": "https://rseng.github.io/software/repository/github/DistrictDataLabs/yellowbrick", "api_url": "https://rseng.github.io/software/api/repos/github/DistrictDataLabs/yellowbrick"}, {"uid": "github/jluastro/PopSyCLE", "html_url": "https://rseng.github.io/software/repository/github/jluastro/PopSyCLE", "api_url": "https://rseng.github.io/software/api/repos/github/jluastro/PopSyCLE"}, {"uid": "github/jonas-fuchs/varVAMP", "html_url": "https://rseng.github.io/software/repository/github/jonas-fuchs/varVAMP", "api_url": "https://rseng.github.io/software/api/repos/github/jonas-fuchs/varVAMP"}, {"uid": "github/ABard0/MDGF-MCEC", "html_url": "https://rseng.github.io/software/repository/github/ABard0/MDGF-MCEC", "api_url": "https://rseng.github.io/software/api/repos/github/ABard0/MDGF-MCEC"}, {"uid": "github/desihub/fastspecfit", "html_url": "https://rseng.github.io/software/repository/github/desihub/fastspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/fastspecfit"}, {"uid": "github/desihub/desitarget", "html_url": "https://rseng.github.io/software/repository/github/desihub/desitarget", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/desitarget"}, {"uid": "github/bioAI-Oslo/Spikeometric", "html_url": "https://rseng.github.io/software/repository/github/bioAI-Oslo/Spikeometric", "api_url": "https://rseng.github.io/software/api/repos/github/bioAI-Oslo/Spikeometric"}, {"uid": "github/data4goodlab/wgand", "html_url": "https://rseng.github.io/software/repository/github/data4goodlab/wgand", "api_url": "https://rseng.github.io/software/api/repos/github/data4goodlab/wgand"}, {"uid": "github/zizroc/villager", "html_url": "https://rseng.github.io/software/repository/github/zizroc/villager", "api_url": "https://rseng.github.io/software/api/repos/github/zizroc/villager"}, {"uid": "github/DenaJGibbon/gibbonNetR", "html_url": "https://rseng.github.io/software/repository/github/DenaJGibbon/gibbonNetR", "api_url": "https://rseng.github.io/software/api/repos/github/DenaJGibbon/gibbonNetR"}, {"uid": "github/khyox/recentrifuge", "html_url": "https://rseng.github.io/software/repository/github/khyox/recentrifuge", "api_url": "https://rseng.github.io/software/api/repos/github/khyox/recentrifuge"}, {"uid": "github/isakro/shoredate", "html_url": "https://rseng.github.io/software/repository/github/isakro/shoredate", "api_url": "https://rseng.github.io/software/api/repos/github/isakro/shoredate"}, {"uid": "github/travisseymour/EPICpy", "html_url": "https://rseng.github.io/software/repository/github/travisseymour/EPICpy", "api_url": "https://rseng.github.io/software/api/repos/github/travisseymour/EPICpy"}, {"uid": "github/aadya940/chainopy", "html_url": "https://rseng.github.io/software/repository/github/aadya940/chainopy", "api_url": "https://rseng.github.io/software/api/repos/github/aadya940/chainopy"}, {"uid": "github/RealTimeGenomics/rtg-tools", "html_url": "https://rseng.github.io/software/repository/github/RealTimeGenomics/rtg-tools", "api_url": "https://rseng.github.io/software/api/repos/github/RealTimeGenomics/rtg-tools"}, {"uid": "github/zooniverse/starpy", "html_url": "https://rseng.github.io/software/repository/github/zooniverse/starpy", "api_url": "https://rseng.github.io/software/api/repos/github/zooniverse/starpy"}, {"uid": "github/Teichlab/bin2cell", "html_url": "https://rseng.github.io/software/repository/github/Teichlab/bin2cell", "api_url": "https://rseng.github.io/software/api/repos/github/Teichlab/bin2cell"}, {"uid": "github/MeasureTransport/MParT", "html_url": "https://rseng.github.io/software/repository/github/MeasureTransport/MParT", "api_url": "https://rseng.github.io/software/api/repos/github/MeasureTransport/MParT"}, {"uid": "github/siriobelli/flame", "html_url": "https://rseng.github.io/software/repository/github/siriobelli/flame", "api_url": "https://rseng.github.io/software/api/repos/github/siriobelli/flame"}, {"uid": "github/FrancesBW/bellamy", "html_url": "https://rseng.github.io/software/repository/github/FrancesBW/bellamy", "api_url": "https://rseng.github.io/software/api/repos/github/FrancesBW/bellamy"}, {"uid": "github/antoinemarchal/ROHSA", "html_url": "https://rseng.github.io/software/repository/github/antoinemarchal/ROHSA", "api_url": "https://rseng.github.io/software/api/repos/github/antoinemarchal/ROHSA"}, {"uid": "github/diCenzo-GC/Tn-Core-webserver", "html_url": "https://rseng.github.io/software/repository/github/diCenzo-GC/Tn-Core-webserver", "api_url": "https://rseng.github.io/software/api/repos/github/diCenzo-GC/Tn-Core-webserver"}, {"uid": "github/OpenDA-Association/OpenDA", "html_url": "https://rseng.github.io/software/repository/github/OpenDA-Association/OpenDA", "api_url": "https://rseng.github.io/software/api/repos/github/OpenDA-Association/OpenDA"}, {"uid": "github/Fermipy/fermipy", "html_url": "https://rseng.github.io/software/repository/github/Fermipy/fermipy", "api_url": "https://rseng.github.io/software/api/repos/github/Fermipy/fermipy"}, {"uid": "github/jacobblum/simDRIFT", "html_url": "https://rseng.github.io/software/repository/github/jacobblum/simDRIFT", "api_url": "https://rseng.github.io/software/api/repos/github/jacobblum/simDRIFT"}, {"uid": "github/SAMI-Galaxy-Survey/sami", "html_url": "https://rseng.github.io/software/repository/github/SAMI-Galaxy-Survey/sami", "api_url": "https://rseng.github.io/software/api/repos/github/SAMI-Galaxy-Survey/sami"}, {"uid": "github/marberts/piar", "html_url": "https://rseng.github.io/software/repository/github/marberts/piar", "api_url": "https://rseng.github.io/software/api/repos/github/marberts/piar"}, {"uid": "github/agombolay/ribose-map", "html_url": "https://rseng.github.io/software/repository/github/agombolay/ribose-map", "api_url": "https://rseng.github.io/software/api/repos/github/agombolay/ribose-map"}, {"uid": "github/michauhl/RBPBench", "html_url": "https://rseng.github.io/software/repository/github/michauhl/RBPBench", "api_url": "https://rseng.github.io/software/api/repos/github/michauhl/RBPBench"}, {"uid": "github/mathworks/Simscape-Medical-Ventilator", "html_url": "https://rseng.github.io/software/repository/github/mathworks/Simscape-Medical-Ventilator", "api_url": "https://rseng.github.io/software/api/repos/github/mathworks/Simscape-Medical-Ventilator"}, {"uid": "github/B-UMMI/chewBBACA", "html_url": "https://rseng.github.io/software/repository/github/B-UMMI/chewBBACA", "api_url": "https://rseng.github.io/software/api/repos/github/B-UMMI/chewBBACA"}, {"uid": "github/euroargodev/argopy", "html_url": "https://rseng.github.io/software/repository/github/euroargodev/argopy", "api_url": "https://rseng.github.io/software/api/repos/github/euroargodev/argopy"}, {"uid": "github/eWaterCycle/Cesium-NcWMS", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/Cesium-NcWMS", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/Cesium-NcWMS"}, {"uid": "github/eWaterCycle/eWaterleaf", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/eWaterleaf", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/eWaterleaf"}, {"uid": "github/eWaterCycle/grpc4bmi", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/grpc4bmi", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/grpc4bmi"}, {"uid": "github/eWaterCycle/setup-grpc", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-grpc"}, {"uid": "github/eWaterCycle/ewatercycle", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/ewatercycle", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/ewatercycle"}, {"uid": "github/eWaterCycle/setup-singularity", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-singularity", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-singularity"}, {"uid": "github/eWaterCycle/jupyterlab_thredds", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/jupyterlab_thredds", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/jupyterlab_thredds"}, {"uid": "github/eWaterCycle/experiment-launcher", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/experiment-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/experiment-launcher"}, {"uid": "github/MJTemple/qsogen", "html_url": "https://rseng.github.io/software/repository/github/MJTemple/qsogen", "api_url": "https://rseng.github.io/software/api/repos/github/MJTemple/qsogen"}, {"uid": "github/mariuzka/pop2net", "html_url": "https://rseng.github.io/software/repository/github/mariuzka/pop2net", "api_url": "https://rseng.github.io/software/api/repos/github/mariuzka/pop2net"}, {"uid": "github/enveda/RPath", "html_url": "https://rseng.github.io/software/repository/github/enveda/RPath", "api_url": "https://rseng.github.io/software/api/repos/github/enveda/RPath"}, {"uid": "github/gpantel/MolPainter", "html_url": "https://rseng.github.io/software/repository/github/gpantel/MolPainter", "api_url": "https://rseng.github.io/software/api/repos/github/gpantel/MolPainter"}, {"uid": "github/dgerosa/spops", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/spops", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/spops"}, {"uid": "github/dgerosa/gwdet", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/gwdet", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/gwdet"}, {"uid": "github/dgerosa/surrkick", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/surrkick", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/surrkick"}, {"uid": "github/MikkelSchubert/adapterremoval", "html_url": "https://rseng.github.io/software/repository/github/MikkelSchubert/adapterremoval", "api_url": "https://rseng.github.io/software/api/repos/github/MikkelSchubert/adapterremoval"}, {"uid": "github/PengyiZhang/DRR4Covid", "html_url": "https://rseng.github.io/software/repository/github/PengyiZhang/DRR4Covid", "api_url": "https://rseng.github.io/software/api/repos/github/PengyiZhang/DRR4Covid"}, {"uid": "github/thieu1995/permetrics", "html_url": "https://rseng.github.io/software/repository/github/thieu1995/permetrics", "api_url": "https://rseng.github.io/software/api/repos/github/thieu1995/permetrics"}, {"uid": "github/barricklab/seabreeze", "html_url": "https://rseng.github.io/software/repository/github/barricklab/seabreeze", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/seabreeze"}, {"uid": "github/barricklab/pLannotate", "html_url": "https://rseng.github.io/software/repository/github/barricklab/pLannotate", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/pLannotate"}, {"uid": "github/RichardObi/medigan", "html_url": "https://rseng.github.io/software/repository/github/RichardObi/medigan", "api_url": "https://rseng.github.io/software/api/repos/github/RichardObi/medigan"}, {"uid": "github/zhangzzk/forklens", "html_url": "https://rseng.github.io/software/repository/github/zhangzzk/forklens", "api_url": "https://rseng.github.io/software/api/repos/github/zhangzzk/forklens"}, {"uid": "github/pontoppi/radlite", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/radlite", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/radlite"}, {"uid": "github/pontoppi/ctool", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/ctool", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/ctool"}, {"uid": "github/qqpigass/FREEPII", "html_url": "https://rseng.github.io/software/repository/github/qqpigass/FREEPII", "api_url": "https://rseng.github.io/software/api/repos/github/qqpigass/FREEPII"}, {"uid": "github/febos/SQUARNA", "html_url": "https://rseng.github.io/software/repository/github/febos/SQUARNA", "api_url": "https://rseng.github.io/software/api/repos/github/febos/SQUARNA"}, {"uid": "github/monarch-initiative/loinc2hpo", "html_url": "https://rseng.github.io/software/repository/github/monarch-initiative/loinc2hpo", "api_url": "https://rseng.github.io/software/api/repos/github/monarch-initiative/loinc2hpo"}, {"uid": "github/kieranatkins/gimp-image-annotator", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/gimp-image-annotator", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/gimp-image-annotator"}, {"uid": "github/kieranatkins/silique-detector", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/silique-detector", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/silique-detector"}, {"uid": "github/bacpop/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/bacpop/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/PopPUNK"}, {"uid": "github/bacpop/ska.rust", "html_url": "https://rseng.github.io/software/repository/github/bacpop/ska.rust", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/ska.rust"}, {"uid": "github/FrdCHK/serial-MultiView", "html_url": "https://rseng.github.io/software/repository/github/FrdCHK/serial-MultiView", "api_url": "https://rseng.github.io/software/api/repos/github/FrdCHK/serial-MultiView"}, {"uid": "github/koszullab/pareidolia", "html_url": "https://rseng.github.io/software/repository/github/koszullab/pareidolia", "api_url": "https://rseng.github.io/software/api/repos/github/koszullab/pareidolia"}, {"uid": "github/astroml/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroml/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroml/gatspy"}, {"uid": "github/mbursa/sim5", "html_url": "https://rseng.github.io/software/repository/github/mbursa/sim5", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/sim5"}, {"uid": "github/mbursa/disk-models", "html_url": "https://rseng.github.io/software/repository/github/mbursa/disk-models", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/disk-models"}, {"uid": "github/21cmfast/21cmEMU", "html_url": "https://rseng.github.io/software/repository/github/21cmfast/21cmEMU", "api_url": "https://rseng.github.io/software/api/repos/github/21cmfast/21cmEMU"}, {"uid": "github/GOVS-pack/GOVS", "html_url": "https://rseng.github.io/software/repository/github/GOVS-pack/GOVS", "api_url": "https://rseng.github.io/software/api/repos/github/GOVS-pack/GOVS"}, {"uid": "github/FlowModelingControl/flowtorch", "html_url": "https://rseng.github.io/software/repository/github/FlowModelingControl/flowtorch", "api_url": "https://rseng.github.io/software/api/repos/github/FlowModelingControl/flowtorch"}, {"uid": "github/nppackages/lpcde", "html_url": "https://rseng.github.io/software/repository/github/nppackages/lpcde", "api_url": "https://rseng.github.io/software/api/repos/github/nppackages/lpcde"}, {"uid": "github/lionandjelka/QhX1", "html_url": "https://rseng.github.io/software/repository/github/lionandjelka/QhX1", "api_url": "https://rseng.github.io/software/api/repos/github/lionandjelka/QhX1"}, {"uid": "github/WatsonLab/MAGpy", "html_url": "https://rseng.github.io/software/repository/github/WatsonLab/MAGpy", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonLab/MAGpy"}, {"uid": "github/DragonflyTelescope/dfreproject", "html_url": "https://rseng.github.io/software/repository/github/DragonflyTelescope/dfreproject", "api_url": "https://rseng.github.io/software/api/repos/github/DragonflyTelescope/dfreproject"}, {"uid": "github/fcastagna/preprofit", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/preprofit", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/preprofit"}, {"uid": "github/fcastagna/JoXSZ", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/JoXSZ", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/JoXSZ"}, {"uid": "github/JeffLCoughlin/EphemMatch", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/EphemMatch", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/EphemMatch"}, {"uid": "github/JeffLCoughlin/skye", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/skye", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/skye"}, {"uid": "github/LuShenJ/PyEMILI", "html_url": "https://rseng.github.io/software/repository/github/LuShenJ/PyEMILI", "api_url": "https://rseng.github.io/software/api/repos/github/LuShenJ/PyEMILI"}, {"uid": "github/benvanwerkhoven/kernel_tuner", "html_url": "https://rseng.github.io/software/repository/github/benvanwerkhoven/kernel_tuner", "api_url": "https://rseng.github.io/software/api/repos/github/benvanwerkhoven/kernel_tuner"}, {"uid": "github/AndrewAnnex/SpiceyPy", "html_url": "https://rseng.github.io/software/repository/github/AndrewAnnex/SpiceyPy", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewAnnex/SpiceyPy"}, {"uid": "github/chrisaberson/BetterReg", "html_url": "https://rseng.github.io/software/repository/github/chrisaberson/BetterReg", "api_url": "https://rseng.github.io/software/api/repos/github/chrisaberson/BetterReg"}, {"uid": "github/d-tear/SIAL", "html_url": "https://rseng.github.io/software/repository/github/d-tear/SIAL", "api_url": "https://rseng.github.io/software/api/repos/github/d-tear/SIAL"}, {"uid": "github/igorrivin/graphem", "html_url": "https://rseng.github.io/software/repository/github/igorrivin/graphem", "api_url": "https://rseng.github.io/software/api/repos/github/igorrivin/graphem"}, {"uid": "github/nkallima/sim-universal-construction", "html_url": "https://rseng.github.io/software/repository/github/nkallima/sim-universal-construction", "api_url": "https://rseng.github.io/software/api/repos/github/nkallima/sim-universal-construction"}, {"uid": "github/cjbarrie/academictwitteR", "html_url": "https://rseng.github.io/software/repository/github/cjbarrie/academictwitteR", "api_url": "https://rseng.github.io/software/api/repos/github/cjbarrie/academictwitteR"}, {"uid": "github/Tomaubier/CoperniFUS", "html_url": "https://rseng.github.io/software/repository/github/Tomaubier/CoperniFUS", "api_url": "https://rseng.github.io/software/api/repos/github/Tomaubier/CoperniFUS"}, {"uid": "github/AarhusCosmology/connect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/connect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/connect_public"}, {"uid": "github/AarhusCosmology/prospect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/prospect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/prospect_public"}, {"uid": "github/niceume/datasailr", "html_url": "https://rseng.github.io/software/repository/github/niceume/datasailr", "api_url": "https://rseng.github.io/software/api/repos/github/niceume/datasailr"}, {"uid": "github/JLiangLab/TransVW", "html_url": "https://rseng.github.io/software/repository/github/JLiangLab/TransVW", "api_url": "https://rseng.github.io/software/api/repos/github/JLiangLab/TransVW"}, {"uid": "github/BattModels/asimtools", "html_url": "https://rseng.github.io/software/repository/github/BattModels/asimtools", "api_url": "https://rseng.github.io/software/api/repos/github/BattModels/asimtools"}, {"uid": "github/databio/GenomicDistributions", "html_url": "https://rseng.github.io/software/repository/github/databio/GenomicDistributions", "api_url": "https://rseng.github.io/software/api/repos/github/databio/GenomicDistributions"}, {"uid": "github/PathwayCommons/grounding-search", "html_url": "https://rseng.github.io/software/repository/github/PathwayCommons/grounding-search", "api_url": "https://rseng.github.io/software/api/repos/github/PathwayCommons/grounding-search"}, {"uid": "github/darrencroton/sage", "html_url": "https://rseng.github.io/software/repository/github/darrencroton/sage", "api_url": "https://rseng.github.io/software/api/repos/github/darrencroton/sage"}, {"uid": "github/sklasfeld/DANPOS3", "html_url": "https://rseng.github.io/software/repository/github/sklasfeld/DANPOS3", "api_url": "https://rseng.github.io/software/api/repos/github/sklasfeld/DANPOS3"}, {"uid": "github/SchmidtDSE/afscgap", "html_url": "https://rseng.github.io/software/repository/github/SchmidtDSE/afscgap", "api_url": "https://rseng.github.io/software/api/repos/github/SchmidtDSE/afscgap"}, {"uid": "github/forceflow1049/phast", "html_url": "https://rseng.github.io/software/repository/github/forceflow1049/phast", "api_url": "https://rseng.github.io/software/api/repos/github/forceflow1049/phast"}, {"uid": "github/pvlib/pvlib-python", "html_url": "https://rseng.github.io/software/repository/github/pvlib/pvlib-python", "api_url": "https://rseng.github.io/software/api/repos/github/pvlib/pvlib-python"}, {"uid": "github/eleniadam/npgreat", "html_url": "https://rseng.github.io/software/repository/github/eleniadam/npgreat", "api_url": "https://rseng.github.io/software/api/repos/github/eleniadam/npgreat"}, {"uid": "github/kevin218/Eureka", "html_url": "https://rseng.github.io/software/repository/github/kevin218/Eureka", "api_url": "https://rseng.github.io/software/api/repos/github/kevin218/Eureka"}, {"uid": "github/arvados/arvados", "html_url": "https://rseng.github.io/software/repository/github/arvados/arvados", "api_url": "https://rseng.github.io/software/api/repos/github/arvados/arvados"}, {"uid": "github/arnikz/PIQMIe", "html_url": "https://rseng.github.io/software/repository/github/arnikz/PIQMIe", "api_url": "https://rseng.github.io/software/api/repos/github/arnikz/PIQMIe"}, {"uid": "github/mpeel/fastcc", "html_url": "https://rseng.github.io/software/repository/github/mpeel/fastcc", "api_url": "https://rseng.github.io/software/api/repos/github/mpeel/fastcc"}, {"uid": "github/mastodon-sc/mastodon-deep-lineage", "html_url": "https://rseng.github.io/software/repository/github/mastodon-sc/mastodon-deep-lineage", "api_url": "https://rseng.github.io/software/api/repos/github/mastodon-sc/mastodon-deep-lineage"}, {"uid": "github/ChengF-Lab/AOPEDF", "html_url": "https://rseng.github.io/software/repository/github/ChengF-Lab/AOPEDF", "api_url": "https://rseng.github.io/software/api/repos/github/ChengF-Lab/AOPEDF"}, {"uid": "github/IMMM-SFA/naturf", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/naturf", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/naturf"}, {"uid": "github/IMMM-SFA/statemodify", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/statemodify", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/statemodify"}, {"uid": "github/IMMM-SFA/gamut", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/gamut", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/gamut"}, {"uid": "github/IMMM-SFA/tell", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/tell", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/tell"}, {"uid": "github/IMMM-SFA/mosartwmpy", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/mosartwmpy", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/mosartwmpy"}, {"uid": "github/KathrynJones1/catwoman", "html_url": "https://rseng.github.io/software/repository/github/KathrynJones1/catwoman", "api_url": "https://rseng.github.io/software/api/repos/github/KathrynJones1/catwoman"}, {"uid": "github/timothydmorton/vespa", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/vespa", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/vespa"}, {"uid": "github/timothydmorton/isochrones", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/isochrones", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/isochrones"}, {"uid": "github/pyspeckit/pyspeckit", "html_url": "https://rseng.github.io/software/repository/github/pyspeckit/pyspeckit", "api_url": "https://rseng.github.io/software/api/repos/github/pyspeckit/pyspeckit"}, {"uid": "github/jfoster17/extinction-distances", "html_url": "https://rseng.github.io/software/repository/github/jfoster17/extinction-distances", "api_url": "https://rseng.github.io/software/api/repos/github/jfoster17/extinction-distances"}, {"uid": "github/enthusi/feline", "html_url": "https://rseng.github.io/software/repository/github/enthusi/feline", "api_url": "https://rseng.github.io/software/api/repos/github/enthusi/feline"}, {"uid": "github/robertwissing/EOS", "html_url": "https://rseng.github.io/software/repository/github/robertwissing/EOS", "api_url": "https://rseng.github.io/software/api/repos/github/robertwissing/EOS"}, {"uid": "github/RozanskiT/suppnet", "html_url": "https://rseng.github.io/software/repository/github/RozanskiT/suppnet", "api_url": "https://rseng.github.io/software/api/repos/github/RozanskiT/suppnet"}, {"uid": "github/lazzati-astro/MCRaT", "html_url": "https://rseng.github.io/software/repository/github/lazzati-astro/MCRaT", "api_url": "https://rseng.github.io/software/api/repos/github/lazzati-astro/MCRaT"}, {"uid": "github/IslasGECI/nerd", "html_url": "https://rseng.github.io/software/repository/github/IslasGECI/nerd", "api_url": "https://rseng.github.io/software/api/repos/github/IslasGECI/nerd"}, {"uid": "github/astro-otter/otter", "html_url": "https://rseng.github.io/software/repository/github/astro-otter/otter", "api_url": "https://rseng.github.io/software/api/repos/github/astro-otter/otter"}, {"uid": "github/UFParLab/aces4", "html_url": "https://rseng.github.io/software/repository/github/UFParLab/aces4", "api_url": "https://rseng.github.io/software/api/repos/github/UFParLab/aces4"}, {"uid": "github/scotthgn/relagn", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/relagn", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/relagn"}, {"uid": "github/scotthgn/AGNvar", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/AGNvar", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/AGNvar"}, {"uid": "github/DrMarc/slab", "html_url": "https://rseng.github.io/software/repository/github/DrMarc/slab", "api_url": "https://rseng.github.io/software/api/repos/github/DrMarc/slab"}, {"uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", "html_url": "https://rseng.github.io/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", "api_url": "https://rseng.github.io/software/api/repos/github/TeHanHunter/TESS_Gaia_Light_Curve"}, {"uid": "github/helenqu/scone", "html_url": "https://rseng.github.io/software/repository/github/helenqu/scone", "api_url": "https://rseng.github.io/software/api/repos/github/helenqu/scone"}, {"uid": "github/hematthi/SysSimPyPlots", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyPlots", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyPlots"}, {"uid": "github/hematthi/SysSimPyMMEN", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyMMEN", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyMMEN"}, {"uid": "github/nifty-ppl/nifty", "html_url": "https://rseng.github.io/software/repository/github/nifty-ppl/nifty", "api_url": "https://rseng.github.io/software/api/repos/github/nifty-ppl/nifty"}, {"uid": "github/realfastvla/realfast", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/realfast", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/realfast"}, {"uid": "github/realfastvla/rfpipe", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/rfpipe", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/rfpipe"}, {"uid": "github/lynx-x-ray-observatory/soxs", "html_url": "https://rseng.github.io/software/repository/github/lynx-x-ray-observatory/soxs", "api_url": "https://rseng.github.io/software/api/repos/github/lynx-x-ray-observatory/soxs"}, {"uid": "github/ledatelescope/bifrost", "html_url": "https://rseng.github.io/software/repository/github/ledatelescope/bifrost", "api_url": "https://rseng.github.io/software/api/repos/github/ledatelescope/bifrost"}, {"uid": "github/MNiwano/Eclaire", "html_url": "https://rseng.github.io/software/repository/github/MNiwano/Eclaire", "api_url": "https://rseng.github.io/software/api/repos/github/MNiwano/Eclaire"}, {"uid": "github/FabianPlum/OmniTrax", "html_url": "https://rseng.github.io/software/repository/github/FabianPlum/OmniTrax", "api_url": "https://rseng.github.io/software/api/repos/github/FabianPlum/OmniTrax"}, {"uid": "github/sourmash-bio/sourmash", "html_url": "https://rseng.github.io/software/repository/github/sourmash-bio/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/sourmash-bio/sourmash"}, {"uid": "github/AndresRTejedor/Mold", "html_url": "https://rseng.github.io/software/repository/github/AndresRTejedor/Mold", "api_url": "https://rseng.github.io/software/api/repos/github/AndresRTejedor/Mold"}, {"uid": "github/suchanek/proteusPy", "html_url": "https://rseng.github.io/software/repository/github/suchanek/proteusPy", "api_url": "https://rseng.github.io/software/api/repos/github/suchanek/proteusPy"}, {"uid": "github/bulik/ldsc", "html_url": "https://rseng.github.io/software/repository/github/bulik/ldsc", "api_url": "https://rseng.github.io/software/api/repos/github/bulik/ldsc"}, {"uid": "github/BioGearsEngine/core", "html_url": "https://rseng.github.io/software/repository/github/BioGearsEngine/core", "api_url": "https://rseng.github.io/software/api/repos/github/BioGearsEngine/core"}, {"uid": "github/jeetsukumaran/DendroPy", "html_url": "https://rseng.github.io/software/repository/github/jeetsukumaran/DendroPy", "api_url": "https://rseng.github.io/software/api/repos/github/jeetsukumaran/DendroPy"}, {"uid": "github/ben-cassese/squishyplanet", "html_url": "https://rseng.github.io/software/repository/github/ben-cassese/squishyplanet", "api_url": "https://rseng.github.io/software/api/repos/github/ben-cassese/squishyplanet"}, {"uid": "github/rgerum/pylustrator", "html_url": "https://rseng.github.io/software/repository/github/rgerum/pylustrator", "api_url": "https://rseng.github.io/software/api/repos/github/rgerum/pylustrator"}, {"uid": "github/alexriss/SpmImageTycoon.jl", "html_url": "https://rseng.github.io/software/repository/github/alexriss/SpmImageTycoon.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alexriss/SpmImageTycoon.jl"}, {"uid": "github/tzhu-bio/UMI-ATAC-seq", "html_url": "https://rseng.github.io/software/repository/github/tzhu-bio/UMI-ATAC-seq", "api_url": "https://rseng.github.io/software/api/repos/github/tzhu-bio/UMI-ATAC-seq"}, {"uid": "github/carpenterphysics/DarkFlux", "html_url": "https://rseng.github.io/software/repository/github/carpenterphysics/DarkFlux", "api_url": "https://rseng.github.io/software/api/repos/github/carpenterphysics/DarkFlux"}, {"uid": "github/idaholab/MontePy", "html_url": "https://rseng.github.io/software/repository/github/idaholab/MontePy", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/MontePy"}, {"uid": "github/idaholab/moose", "html_url": "https://rseng.github.io/software/repository/github/idaholab/moose", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/moose"}, {"uid": "github/astro-group-bristol/Gradus.jl", "html_url": "https://rseng.github.io/software/repository/github/astro-group-bristol/Gradus.jl", "api_url": "https://rseng.github.io/software/api/repos/github/astro-group-bristol/Gradus.jl"}, {"uid": "github/BU-ISCIII/plasmidID", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/plasmidID", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/plasmidID"}, {"uid": "github/BU-ISCIII/taranis", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/taranis", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/taranis"}, {"uid": "github/BU-ISCIII/iSkyLIMS", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/iSkyLIMS", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/iSkyLIMS"}, {"uid": "github/SKA-INAF/caesar-rest", "html_url": "https://rseng.github.io/software/repository/github/SKA-INAF/caesar-rest", "api_url": "https://rseng.github.io/software/api/repos/github/SKA-INAF/caesar-rest"}, {"uid": "github/Peppags/CNN-SVR", "html_url": "https://rseng.github.io/software/repository/github/Peppags/CNN-SVR", "api_url": "https://rseng.github.io/software/api/repos/github/Peppags/CNN-SVR"}, {"uid": "github/snek5000/snek5000", "html_url": "https://rseng.github.io/software/repository/github/snek5000/snek5000", "api_url": "https://rseng.github.io/software/api/repos/github/snek5000/snek5000"}, {"uid": "github/BlauGroup/RNMC", "html_url": "https://rseng.github.io/software/repository/github/BlauGroup/RNMC", "api_url": "https://rseng.github.io/software/api/repos/github/BlauGroup/RNMC"}, {"uid": "github/ExoJulia/SysSimExClusters", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/SysSimExClusters", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/SysSimExClusters"}, {"uid": "github/ExoJulia/ExoplanetsSysSim.jl", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/ExoplanetsSysSim.jl"}, {"uid": "github/czbiohub/cerebra", "html_url": "https://rseng.github.io/software/repository/github/czbiohub/cerebra", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub/cerebra"}, {"uid": "github/eblur/dust", "html_url": "https://rseng.github.io/software/repository/github/eblur/dust", "api_url": "https://rseng.github.io/software/api/repos/github/eblur/dust"}, {"uid": "github/bic-nirrh/precocity", "html_url": "https://rseng.github.io/software/repository/github/bic-nirrh/precocity", "api_url": "https://rseng.github.io/software/api/repos/github/bic-nirrh/precocity"}, {"uid": "github/easystats/performance", "html_url": "https://rseng.github.io/software/repository/github/easystats/performance", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/performance"}, {"uid": "github/easystats/correlation", "html_url": "https://rseng.github.io/software/repository/github/easystats/correlation", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/correlation"}, {"uid": "github/easystats/modelbased", "html_url": "https://rseng.github.io/software/repository/github/easystats/modelbased", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/modelbased"}, {"uid": "github/easystats/parameters", "html_url": "https://rseng.github.io/software/repository/github/easystats/parameters", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/parameters"}, {"uid": "github/easystats/effectsize", "html_url": "https://rseng.github.io/software/repository/github/easystats/effectsize", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/effectsize"}, {"uid": "github/Chenmi0619/GALMoss", "html_url": "https://rseng.github.io/software/repository/github/Chenmi0619/GALMoss", "api_url": "https://rseng.github.io/software/api/repos/github/Chenmi0619/GALMoss"}, {"uid": "github/scrm/scrmhub.io", "html_url": "https://rseng.github.io/software/repository/github/scrm/scrmhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/scrm/scrmhub.io"}, {"uid": "github/dieghernan/tidyterra", "html_url": "https://rseng.github.io/software/repository/github/dieghernan/tidyterra", "api_url": "https://rseng.github.io/software/api/repos/github/dieghernan/tidyterra"}, {"uid": "github/maho3/ltu-ili", "html_url": "https://rseng.github.io/software/repository/github/maho3/ltu-ili", "api_url": "https://rseng.github.io/software/api/repos/github/maho3/ltu-ili"}, {"uid": "github/myfang2021/VIPPID", "html_url": "https://rseng.github.io/software/repository/github/myfang2021/VIPPID", "api_url": "https://rseng.github.io/software/api/repos/github/myfang2021/VIPPID"}, {"uid": "github/siavash-saki/tesspy", "html_url": "https://rseng.github.io/software/repository/github/siavash-saki/tesspy", "api_url": "https://rseng.github.io/software/api/repos/github/siavash-saki/tesspy"}, {"uid": "github/jkluter/MLG", "html_url": "https://rseng.github.io/software/repository/github/jkluter/MLG", "api_url": "https://rseng.github.io/software/api/repos/github/jkluter/MLG"}, {"uid": "github/Bgi-LUSH/GPMeta", "html_url": "https://rseng.github.io/software/repository/github/Bgi-LUSH/GPMeta", "api_url": "https://rseng.github.io/software/api/repos/github/Bgi-LUSH/GPMeta"}, {"uid": "github/VU-BEAM-Lab/GENRE", "html_url": "https://rseng.github.io/software/repository/github/VU-BEAM-Lab/GENRE", "api_url": "https://rseng.github.io/software/api/repos/github/VU-BEAM-Lab/GENRE"}, {"uid": "github/netsiphd/netrd", "html_url": "https://rseng.github.io/software/repository/github/netsiphd/netrd", "api_url": "https://rseng.github.io/software/api/repos/github/netsiphd/netrd"}, {"uid": "github/fury-gl/fury", "html_url": "https://rseng.github.io/software/repository/github/fury-gl/fury", "api_url": "https://rseng.github.io/software/api/repos/github/fury-gl/fury"}, {"uid": "github/AlanPearl/diffopt", "html_url": "https://rseng.github.io/software/repository/github/AlanPearl/diffopt", "api_url": "https://rseng.github.io/software/api/repos/github/AlanPearl/diffopt"}, {"uid": "github/ADAH-EviDENce/evidence", "html_url": "https://rseng.github.io/software/repository/github/ADAH-EviDENce/evidence", "api_url": "https://rseng.github.io/software/api/repos/github/ADAH-EviDENce/evidence"}, {"uid": "github/shangguandong1996/FindIT2", "html_url": "https://rseng.github.io/software/repository/github/shangguandong1996/FindIT2", "api_url": "https://rseng.github.io/software/api/repos/github/shangguandong1996/FindIT2"}, {"uid": "github/TriPed-Robot/TriP", "html_url": "https://rseng.github.io/software/repository/github/TriPed-Robot/TriP", "api_url": "https://rseng.github.io/software/api/repos/github/TriPed-Robot/TriP"}, {"uid": "github/mperezcarrasco/AnomalyALeRCE", "html_url": "https://rseng.github.io/software/repository/github/mperezcarrasco/AnomalyALeRCE", "api_url": "https://rseng.github.io/software/api/repos/github/mperezcarrasco/AnomalyALeRCE"}, {"uid": "github/SAIL-Labs/AMICAL", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/AMICAL", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/AMICAL"}, {"uid": "github/NielsenBerkeleyLab/sconce", "html_url": "https://rseng.github.io/software/repository/github/NielsenBerkeleyLab/sconce", "api_url": "https://rseng.github.io/software/api/repos/github/NielsenBerkeleyLab/sconce"}, {"uid": "github/heliopython/heliopy", "html_url": "https://rseng.github.io/software/repository/github/heliopython/heliopy", "api_url": "https://rseng.github.io/software/api/repos/github/heliopython/heliopy"}, {"uid": "github/pierrebarbera/epa-ng", "html_url": "https://rseng.github.io/software/repository/github/pierrebarbera/epa-ng", "api_url": "https://rseng.github.io/software/api/repos/github/pierrebarbera/epa-ng"}, {"uid": "github/zpenoyre/CausticFrog", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/CausticFrog", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/CausticFrog"}, {"uid": "github/zpenoyre/OoT", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/OoT", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/OoT"}, {"uid": "github/tmcclintock/cluster_toolkit", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/cluster_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/cluster_toolkit"}, {"uid": "github/tmcclintock/AReconstructionTool", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/AReconstructionTool", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/AReconstructionTool"}, {"uid": "github/fpavogt/fcmaker", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/fcmaker", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/fcmaker"}, {"uid": "github/fpavogt/E0102-VR", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/E0102-VR", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/E0102-VR"}, {"uid": "github/PRIDE-Archive/pridepy", "html_url": "https://rseng.github.io/software/repository/github/PRIDE-Archive/pridepy", "api_url": "https://rseng.github.io/software/api/repos/github/PRIDE-Archive/pridepy"}, {"uid": "github/ReSurfEMG/ReSurfEMG", "html_url": "https://rseng.github.io/software/repository/github/ReSurfEMG/ReSurfEMG", "api_url": "https://rseng.github.io/software/api/repos/github/ReSurfEMG/ReSurfEMG"}, {"uid": "github/STEllAR-GROUP/octotiger", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/octotiger", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/octotiger"}, {"uid": "github/STEllAR-GROUP/hpx", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/hpx", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/hpx"}, {"uid": "github/cicirello/rho-mu", "html_url": "https://rseng.github.io/software/repository/github/cicirello/rho-mu", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/rho-mu"}, {"uid": "github/cicirello/Chips-n-Salsa", "html_url": "https://rseng.github.io/software/repository/github/cicirello/Chips-n-Salsa", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/Chips-n-Salsa"}, {"uid": "github/VeinsOfTheEarth/rabpro", "html_url": "https://rseng.github.io/software/repository/github/VeinsOfTheEarth/rabpro", "api_url": "https://rseng.github.io/software/api/repos/github/VeinsOfTheEarth/rabpro"}, {"uid": "github/deeprob/ThioesteraseEnzymeSpecificity", "html_url": "https://rseng.github.io/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", "api_url": "https://rseng.github.io/software/api/repos/github/deeprob/ThioesteraseEnzymeSpecificity"}, {"uid": "github/CMC-lab/TranCIT", "html_url": "https://rseng.github.io/software/repository/github/CMC-lab/TranCIT", "api_url": "https://rseng.github.io/software/api/repos/github/CMC-lab/TranCIT"}, {"uid": "github/keatonb/Pyriod", "html_url": "https://rseng.github.io/software/repository/github/keatonb/Pyriod", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/Pyriod"}, {"uid": "github/keatonb/TESS_PRF", "html_url": "https://rseng.github.io/software/repository/github/keatonb/TESS_PRF", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/TESS_PRF"}, {"uid": "github/vpc-ccg/svict", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/svict", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/svict"}, {"uid": "github/vpc-ccg/genion", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/genion", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/genion"}, {"uid": "github/vpc-ccg/calib", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/calib", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/calib"}, {"uid": "github/reality/klarigi", "html_url": "https://rseng.github.io/software/repository/github/reality/klarigi", "api_url": "https://rseng.github.io/software/api/repos/github/reality/klarigi"}, {"uid": "github/SMTG-Bham/doped", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/doped", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/doped"}, {"uid": "github/SMTG-Bham/ThermoParser", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/ThermoParser", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/ThermoParser"}, {"uid": "github/matthiaslee/Xmatch", "html_url": "https://rseng.github.io/software/repository/github/matthiaslee/Xmatch", "api_url": "https://rseng.github.io/software/api/repos/github/matthiaslee/Xmatch"}, {"uid": "github/osallou/cassiopee-c", "html_url": "https://rseng.github.io/software/repository/github/osallou/cassiopee-c", "api_url": "https://rseng.github.io/software/api/repos/github/osallou/cassiopee-c"}, {"uid": "github/openmsr/CAD_to_OpenMC", "html_url": "https://rseng.github.io/software/repository/github/openmsr/CAD_to_OpenMC", "api_url": "https://rseng.github.io/software/api/repos/github/openmsr/CAD_to_OpenMC"}, {"uid": "github/liuhao-cn/fastSHT", "html_url": "https://rseng.github.io/software/repository/github/liuhao-cn/fastSHT", "api_url": "https://rseng.github.io/software/api/repos/github/liuhao-cn/fastSHT"}, {"uid": "github/lucadimascolo/socca", "html_url": "https://rseng.github.io/software/repository/github/lucadimascolo/socca", "api_url": "https://rseng.github.io/software/api/repos/github/lucadimascolo/socca"}, {"uid": "github/mpi4py/shmem4py", "html_url": "https://rseng.github.io/software/repository/github/mpi4py/shmem4py", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4py/shmem4py"}, {"uid": "github/ICESat2-SlideRule/paper", "html_url": "https://rseng.github.io/software/repository/github/ICESat2-SlideRule/paper", "api_url": "https://rseng.github.io/software/api/repos/github/ICESat2-SlideRule/paper"}, {"uid": "github/ebundhoo/TAGOPSIN", "html_url": "https://rseng.github.io/software/repository/github/ebundhoo/TAGOPSIN", "api_url": "https://rseng.github.io/software/api/repos/github/ebundhoo/TAGOPSIN"}, {"uid": "github/gbrammer/unicorn", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/unicorn", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/unicorn"}, {"uid": "github/gbrammer/grizli", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/grizli", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/grizli"}, {"uid": "github/gbrammer/threedhst", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/threedhst", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/threedhst"}, {"uid": "github/MD-Studio/MDStudio", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/MDStudio", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/MDStudio"}, {"uid": "github/MD-Studio/cerise", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerise", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerise"}, {"uid": "github/MD-Studio/cerulean", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerulean", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerulean"}, {"uid": "github/gpertea/cdbfasta", "html_url": "https://rseng.github.io/software/repository/github/gpertea/cdbfasta", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/cdbfasta"}, {"uid": "github/gpertea/gclib", "html_url": "https://rseng.github.io/software/repository/github/gpertea/gclib", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/gclib"}, {"uid": "github/yiwenstat/MCPCA_PopGen", "html_url": "https://rseng.github.io/software/repository/github/yiwenstat/MCPCA_PopGen", "api_url": "https://rseng.github.io/software/api/repos/github/yiwenstat/MCPCA_PopGen"}, {"uid": "github/martinjameswhite/ZeldovichRecon", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/ZeldovichRecon", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/ZeldovichRecon"}, {"uid": "github/martinjameswhite/directsht", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/directsht", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/directsht"}, {"uid": "github/lanzen/ampliconnoise", "html_url": "https://rseng.github.io/software/repository/github/lanzen/ampliconnoise", "api_url": "https://rseng.github.io/software/api/repos/github/lanzen/ampliconnoise"}, {"uid": "github/wtsi-hpag/HiLine", "html_url": "https://rseng.github.io/software/repository/github/wtsi-hpag/HiLine", "api_url": "https://rseng.github.io/software/api/repos/github/wtsi-hpag/HiLine"}, {"uid": "github/pysam-developers/pysam", "html_url": "https://rseng.github.io/software/repository/github/pysam-developers/pysam", "api_url": "https://rseng.github.io/software/api/repos/github/pysam-developers/pysam"}, {"uid": "github/astrorama/sourcextractorplusplus", "html_url": "https://rseng.github.io/software/repository/github/astrorama/sourcextractorplusplus", "api_url": "https://rseng.github.io/software/api/repos/github/astrorama/sourcextractorplusplus"}, {"uid": "github/gbouras13/plassembler", "html_url": "https://rseng.github.io/software/repository/github/gbouras13/plassembler", "api_url": "https://rseng.github.io/software/api/repos/github/gbouras13/plassembler"}, {"uid": "github/SuperKogito/spafe", "html_url": "https://rseng.github.io/software/repository/github/SuperKogito/spafe", "api_url": "https://rseng.github.io/software/api/repos/github/SuperKogito/spafe"}, {"uid": "github/amkram/shusher", "html_url": "https://rseng.github.io/software/repository/github/amkram/shusher", "api_url": "https://rseng.github.io/software/api/repos/github/amkram/shusher"}, {"uid": "github/gabo-di/AquaCrop.jl", "html_url": "https://rseng.github.io/software/repository/github/gabo-di/AquaCrop.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gabo-di/AquaCrop.jl"}, {"uid": "github/winni2k/abeona", "html_url": "https://rseng.github.io/software/repository/github/winni2k/abeona", "api_url": "https://rseng.github.io/software/api/repos/github/winni2k/abeona"}, {"uid": "github/alercebroker/ATAT", "html_url": "https://rseng.github.io/software/repository/github/alercebroker/ATAT", "api_url": "https://rseng.github.io/software/api/repos/github/alercebroker/ATAT"}, {"uid": "github/pysersic/pysersic", "html_url": "https://rseng.github.io/software/repository/github/pysersic/pysersic", "api_url": "https://rseng.github.io/software/api/repos/github/pysersic/pysersic"}, {"uid": "github/mpokorny/vysmaw", "html_url": "https://rseng.github.io/software/repository/github/mpokorny/vysmaw", "api_url": "https://rseng.github.io/software/api/repos/github/mpokorny/vysmaw"}, {"uid": "github/ctSkennerton/crass", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/crass", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/crass"}, {"uid": "github/ctSkennerton/minced", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/minced", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/minced"}, {"uid": "github/marcocalza89/GrayHawk", "html_url": "https://rseng.github.io/software/repository/github/marcocalza89/GrayHawk", "api_url": "https://rseng.github.io/software/api/repos/github/marcocalza89/GrayHawk"}, {"uid": "github/jadexter/grtrans", "html_url": "https://rseng.github.io/software/repository/github/jadexter/grtrans", "api_url": "https://rseng.github.io/software/api/repos/github/jadexter/grtrans"}, {"uid": "github/chemfiles/chemfiles", "html_url": "https://rseng.github.io/software/repository/github/chemfiles/chemfiles", "api_url": "https://rseng.github.io/software/api/repos/github/chemfiles/chemfiles"}, {"uid": "github/srigas/jaxkan", "html_url": "https://rseng.github.io/software/repository/github/srigas/jaxkan", "api_url": "https://rseng.github.io/software/api/repos/github/srigas/jaxkan"}, {"uid": "github/spokenlanguage/platalea", "html_url": "https://rseng.github.io/software/repository/github/spokenlanguage/platalea", "api_url": "https://rseng.github.io/software/api/repos/github/spokenlanguage/platalea"}, {"uid": "github/hpdps-group/SolarZip", "html_url": "https://rseng.github.io/software/repository/github/hpdps-group/SolarZip", "api_url": "https://rseng.github.io/software/api/repos/github/hpdps-group/SolarZip"}, {"uid": "github/isce-framework/dolphin", "html_url": "https://rseng.github.io/software/repository/github/isce-framework/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/isce-framework/dolphin"}, {"uid": "github/pysat/pysat", "html_url": "https://rseng.github.io/software/repository/github/pysat/pysat", "api_url": "https://rseng.github.io/software/api/repos/github/pysat/pysat"}, {"uid": "github/JuliaAI/Imbalance.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaAI/Imbalance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaAI/Imbalance.jl"}, {"uid": "github/9505-PNNL/wmpy_power", "html_url": "https://rseng.github.io/software/repository/github/9505-PNNL/wmpy_power", "api_url": "https://rseng.github.io/software/api/repos/github/9505-PNNL/wmpy_power"}, {"uid": "github/BiaPyX/BiaPy", "html_url": "https://rseng.github.io/software/repository/github/BiaPyX/BiaPy", "api_url": "https://rseng.github.io/software/api/repos/github/BiaPyX/BiaPy"}, {"uid": "github/DiseaseTranscriptomicsLab/scStudio", "html_url": "https://rseng.github.io/software/repository/github/DiseaseTranscriptomicsLab/scStudio", "api_url": "https://rseng.github.io/software/api/repos/github/DiseaseTranscriptomicsLab/scStudio"}, {"uid": "github/i-VRESSE/workflow-builder", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/workflow-builder", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/workflow-builder"}, {"uid": "github/i-VRESSE/pdbtbx-ts", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/pdbtbx-ts", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/pdbtbx-ts"}, {"uid": "github/ihmwg/python-modelcif", "html_url": "https://rseng.github.io/software/repository/github/ihmwg/python-modelcif", "api_url": "https://rseng.github.io/software/api/repos/github/ihmwg/python-modelcif"}, {"uid": "github/dfujim/bfit", "html_url": "https://rseng.github.io/software/repository/github/dfujim/bfit", "api_url": "https://rseng.github.io/software/api/repos/github/dfujim/bfit"}, {"uid": "github/areenberg/MDPSolver", "html_url": "https://rseng.github.io/software/repository/github/areenberg/MDPSolver", "api_url": "https://rseng.github.io/software/api/repos/github/areenberg/MDPSolver"}, {"uid": "github/griffithlab/regtools", "html_url": "https://rseng.github.io/software/repository/github/griffithlab/regtools", "api_url": "https://rseng.github.io/software/api/repos/github/griffithlab/regtools"}, {"uid": "github/Robaina/Pynteny", "html_url": "https://rseng.github.io/software/repository/github/Robaina/Pynteny", "api_url": "https://rseng.github.io/software/api/repos/github/Robaina/Pynteny"}, {"uid": "github/easybuilders/easybuild", "html_url": "https://rseng.github.io/software/repository/github/easybuilders/easybuild", "api_url": "https://rseng.github.io/software/api/repos/github/easybuilders/easybuild"}, {"uid": "github/DynaSlum/satsense", "html_url": "https://rseng.github.io/software/repository/github/DynaSlum/satsense", "api_url": "https://rseng.github.io/software/api/repos/github/DynaSlum/satsense"}, {"uid": "github/valentingar/confluxpro", "html_url": "https://rseng.github.io/software/repository/github/valentingar/confluxpro", "api_url": "https://rseng.github.io/software/api/repos/github/valentingar/confluxpro"}, {"uid": "github/damienmarsic/Parent-map", "html_url": "https://rseng.github.io/software/repository/github/damienmarsic/Parent-map", "api_url": "https://rseng.github.io/software/api/repos/github/damienmarsic/Parent-map"}, {"uid": "github/sinanozaydin/pide", "html_url": "https://rseng.github.io/software/repository/github/sinanozaydin/pide", "api_url": "https://rseng.github.io/software/api/repos/github/sinanozaydin/pide"}, {"uid": "github/citiususc/BigSeqKit", "html_url": "https://rseng.github.io/software/repository/github/citiususc/BigSeqKit", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/BigSeqKit"}, {"uid": "github/citiususc/veryfasttree", "html_url": "https://rseng.github.io/software/repository/github/citiususc/veryfasttree", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/veryfasttree"}, {"uid": "github/gagneurlab/drop", "html_url": "https://rseng.github.io/software/repository/github/gagneurlab/drop", "api_url": "https://rseng.github.io/software/api/repos/github/gagneurlab/drop"}, {"uid": "github/sbebo/joypy", "html_url": "https://rseng.github.io/software/repository/github/sbebo/joypy", "api_url": "https://rseng.github.io/software/api/repos/github/sbebo/joypy"}, {"uid": "github/slacgismo/solar-data-tools", "html_url": "https://rseng.github.io/software/repository/github/slacgismo/solar-data-tools", "api_url": "https://rseng.github.io/software/api/repos/github/slacgismo/solar-data-tools"}, {"uid": "github/gxiaolab/scAllele", "html_url": "https://rseng.github.io/software/repository/github/gxiaolab/scAllele", "api_url": "https://rseng.github.io/software/api/repos/github/gxiaolab/scAllele"}, {"uid": "github/ilikecubesnstuff/commensurability", "html_url": "https://rseng.github.io/software/repository/github/ilikecubesnstuff/commensurability", "api_url": "https://rseng.github.io/software/api/repos/github/ilikecubesnstuff/commensurability"}, {"uid": "github/AndrewGibbs/PathFinder", "html_url": "https://rseng.github.io/software/repository/github/AndrewGibbs/PathFinder", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewGibbs/PathFinder"}, {"uid": "github/james-trayford/strauss", "html_url": "https://rseng.github.io/software/repository/github/james-trayford/strauss", "api_url": "https://rseng.github.io/software/api/repos/github/james-trayford/strauss"}, {"uid": "github/asntech/intervene", "html_url": "https://rseng.github.io/software/repository/github/asntech/intervene", "api_url": "https://rseng.github.io/software/api/repos/github/asntech/intervene"}, {"uid": "github/JosephIsaacTurner/pypaperretriever", "html_url": "https://rseng.github.io/software/repository/github/JosephIsaacTurner/pypaperretriever", "api_url": "https://rseng.github.io/software/api/repos/github/JosephIsaacTurner/pypaperretriever"}, {"uid": "github/idefix-code/idefix", "html_url": "https://rseng.github.io/software/repository/github/idefix-code/idefix", "api_url": "https://rseng.github.io/software/api/repos/github/idefix-code/idefix"}, {"uid": "github/WentaoZhan1998/geospaNN", "html_url": "https://rseng.github.io/software/repository/github/WentaoZhan1998/geospaNN", "api_url": "https://rseng.github.io/software/api/repos/github/WentaoZhan1998/geospaNN"}, {"uid": "github/kircherlab/ReMM", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/ReMM", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/ReMM"}, {"uid": "github/kircherlab/cfDNA-UniFlow", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/cfDNA-UniFlow", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/cfDNA-UniFlow"}, {"uid": "github/alexander-mead/HMcode", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/HMcode", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/HMcode"}, {"uid": "github/alexander-mead/collapse", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/collapse", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/collapse"}, {"uid": "github/alexander-mead/pyhalomodel", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/pyhalomodel", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/pyhalomodel"}, {"uid": "github/wvanzeist/riroriro", "html_url": "https://rseng.github.io/software/repository/github/wvanzeist/riroriro", "api_url": "https://rseng.github.io/software/api/repos/github/wvanzeist/riroriro"}, {"uid": "github/CRPropa/CRPropa2", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa2", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa2"}, {"uid": "github/CRPropa/CRPropa3", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa3", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa3"}, {"uid": "github/mwoodbri/MRIdb", "html_url": "https://rseng.github.io/software/repository/github/mwoodbri/MRIdb", "api_url": "https://rseng.github.io/software/api/repos/github/mwoodbri/MRIdb"}, {"uid": "github/FePhyFoFum/phyx", "html_url": "https://rseng.github.io/software/repository/github/FePhyFoFum/phyx", "api_url": "https://rseng.github.io/software/api/repos/github/FePhyFoFum/phyx"}, {"uid": "github/mraveri/tensiometer", "html_url": "https://rseng.github.io/software/repository/github/mraveri/tensiometer", "api_url": "https://rseng.github.io/software/api/repos/github/mraveri/tensiometer"}, {"uid": "github/jonzink/EDI_Vetter_unplugged", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI_Vetter_unplugged", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI_Vetter_unplugged"}, {"uid": "github/jonzink/EDI-Vetter", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI-Vetter", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI-Vetter"}, {"uid": "github/jvc2688/K2-CPM", "html_url": "https://rseng.github.io/software/repository/github/jvc2688/K2-CPM", "api_url": "https://rseng.github.io/software/api/repos/github/jvc2688/K2-CPM"}, {"uid": "github/tdrobinson/coronagraph_noise", "html_url": "https://rseng.github.io/software/repository/github/tdrobinson/coronagraph_noise", "api_url": "https://rseng.github.io/software/api/repos/github/tdrobinson/coronagraph_noise"}, {"uid": "github/ywx649999311/EzTao", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/EzTao", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/EzTao"}, {"uid": "github/ywx649999311/vizic", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/vizic", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/vizic"}, {"uid": "github/jeremiah-corrado/fem_2d", "html_url": "https://rseng.github.io/software/repository/github/jeremiah-corrado/fem_2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeremiah-corrado/fem_2d"}, {"uid": "github/Open-ET/flux-data-qaqc", "html_url": "https://rseng.github.io/software/repository/github/Open-ET/flux-data-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/Open-ET/flux-data-qaqc"}, {"uid": "github/weiliu123/PCLassoReg", "html_url": "https://rseng.github.io/software/repository/github/weiliu123/PCLassoReg", "api_url": "https://rseng.github.io/software/api/repos/github/weiliu123/PCLassoReg"}, {"uid": "github/remingtonsexton/BADASS3", "html_url": "https://rseng.github.io/software/repository/github/remingtonsexton/BADASS3", "api_url": "https://rseng.github.io/software/api/repos/github/remingtonsexton/BADASS3"}, {"uid": "github/ProjectPyRhO/PyRhO", "html_url": "https://rseng.github.io/software/repository/github/ProjectPyRhO/PyRhO", "api_url": "https://rseng.github.io/software/api/repos/github/ProjectPyRhO/PyRhO"}, {"uid": "github/csalyk/spectools_ir", "html_url": "https://rseng.github.io/software/repository/github/csalyk/spectools_ir", "api_url": "https://rseng.github.io/software/api/repos/github/csalyk/spectools_ir"}, {"uid": "github/cbroeckl/RAMClustR", "html_url": "https://rseng.github.io/software/repository/github/cbroeckl/RAMClustR", "api_url": "https://rseng.github.io/software/api/repos/github/cbroeckl/RAMClustR"}, {"uid": "github/agorajs/agora-vpsc", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-vpsc", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-vpsc"}, {"uid": "github/agorajs/agora-forbid", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-forbid", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-forbid"}, {"uid": "github/morispi/LRez", "html_url": "https://rseng.github.io/software/repository/github/morispi/LRez", "api_url": "https://rseng.github.io/software/api/repos/github/morispi/LRez"}, {"uid": "github/ericfell/rfbzero", "html_url": "https://rseng.github.io/software/repository/github/ericfell/rfbzero", "api_url": "https://rseng.github.io/software/api/repos/github/ericfell/rfbzero"}, {"uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "html_url": "https://rseng.github.io/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "api_url": "https://rseng.github.io/software/api/repos/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs"}, {"uid": "github/ChristopheBerthod/Piecewise.jl", "html_url": "https://rseng.github.io/software/repository/github/ChristopheBerthod/Piecewise.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopheBerthod/Piecewise.jl"}, {"uid": "github/vmmunoza/nuHawkHunter", "html_url": "https://rseng.github.io/software/repository/github/vmmunoza/nuHawkHunter", "api_url": "https://rseng.github.io/software/api/repos/github/vmmunoza/nuHawkHunter"}, {"uid": "github/davemlz/eemont", "html_url": "https://rseng.github.io/software/repository/github/davemlz/eemont", "api_url": "https://rseng.github.io/software/api/repos/github/davemlz/eemont"}, {"uid": "github/mbillingr/libgdf", "html_url": "https://rseng.github.io/software/repository/github/mbillingr/libgdf", "api_url": "https://rseng.github.io/software/api/repos/github/mbillingr/libgdf"}, {"uid": "github/saigegit/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/saigegit/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/saigegit/SAIGE"}, {"uid": "github/KorfLab/SNAP", "html_url": "https://rseng.github.io/software/repository/github/KorfLab/SNAP", "api_url": "https://rseng.github.io/software/api/repos/github/KorfLab/SNAP"}, {"uid": "github/joachimwolff/Hi-cGAN", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/Hi-cGAN", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/Hi-cGAN"}, {"uid": "github/joachimwolff/hyperparameterScoringHiC", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/hyperparameterScoringHiC", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/hyperparameterScoringHiC"}, {"uid": "github/ekiefl/pooltool", "html_url": "https://rseng.github.io/software/repository/github/ekiefl/pooltool", "api_url": "https://rseng.github.io/software/api/repos/github/ekiefl/pooltool"}, {"uid": "github/msolpera/pyUPMASK", "html_url": "https://rseng.github.io/software/repository/github/msolpera/pyUPMASK", "api_url": "https://rseng.github.io/software/api/repos/github/msolpera/pyUPMASK"}, {"uid": "github/jrenaud90/TidalPy", "html_url": "https://rseng.github.io/software/repository/github/jrenaud90/TidalPy", "api_url": "https://rseng.github.io/software/api/repos/github/jrenaud90/TidalPy"}, {"uid": "github/ferdymercury/amide", "html_url": "https://rseng.github.io/software/repository/github/ferdymercury/amide", "api_url": "https://rseng.github.io/software/api/repos/github/ferdymercury/amide"}, {"uid": "github/vipinagrawal25/MeMC", "html_url": "https://rseng.github.io/software/repository/github/vipinagrawal25/MeMC", "api_url": "https://rseng.github.io/software/api/repos/github/vipinagrawal25/MeMC"}, {"uid": "github/orbisgis/lczexplore", "html_url": "https://rseng.github.io/software/repository/github/orbisgis/lczexplore", "api_url": "https://rseng.github.io/software/api/repos/github/orbisgis/lczexplore"}, {"uid": "github/spectrapepper/spectrapepper", "html_url": "https://rseng.github.io/software/repository/github/spectrapepper/spectrapepper", "api_url": "https://rseng.github.io/software/api/repos/github/spectrapepper/spectrapepper"}, {"uid": "github/sanjibs/bmcmc", "html_url": "https://rseng.github.io/software/repository/github/sanjibs/bmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/sanjibs/bmcmc"}, {"uid": "github/mostanes/umbrella2", "html_url": "https://rseng.github.io/software/repository/github/mostanes/umbrella2", "api_url": "https://rseng.github.io/software/api/repos/github/mostanes/umbrella2"}, {"uid": "github/panoptes-organization/panoptes", "html_url": "https://rseng.github.io/software/repository/github/panoptes-organization/panoptes", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes-organization/panoptes"}, {"uid": "github/jnktsj/DNApi", "html_url": "https://rseng.github.io/software/repository/github/jnktsj/DNApi", "api_url": "https://rseng.github.io/software/api/repos/github/jnktsj/DNApi"}, {"uid": "github/finagle29/DBSP_DRP", "html_url": "https://rseng.github.io/software/repository/github/finagle29/DBSP_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/finagle29/DBSP_DRP"}, {"uid": "github/astroML/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroML/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroML/gatspy"}, {"uid": "github/mtsch/Ripserer.jl", "html_url": "https://rseng.github.io/software/repository/github/mtsch/Ripserer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mtsch/Ripserer.jl"}, {"uid": "github/PASTAQ-MS/PASTAQ", "html_url": "https://rseng.github.io/software/repository/github/PASTAQ-MS/PASTAQ", "api_url": "https://rseng.github.io/software/api/repos/github/PASTAQ-MS/PASTAQ"}, {"uid": "github/zhoux85/scAdapt", "html_url": "https://rseng.github.io/software/repository/github/zhoux85/scAdapt", "api_url": "https://rseng.github.io/software/api/repos/github/zhoux85/scAdapt"}, {"uid": "github/t-brandt/acorns-adi", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/acorns-adi", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/acorns-adi"}, {"uid": "github/t-brandt/fitramp", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/fitramp", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/fitramp"}, {"uid": "github/t-brandt/orvara", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/orvara", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/orvara"}, {"uid": "github/wathela/FIRST-CLASSIFIER", "html_url": "https://rseng.github.io/software/repository/github/wathela/FIRST-CLASSIFIER", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/FIRST-CLASSIFIER"}, {"uid": "github/wathela/PyMerger", "html_url": "https://rseng.github.io/software/repository/github/wathela/PyMerger", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/PyMerger"}, {"uid": "github/zonca/dst", "html_url": "https://rseng.github.io/software/repository/github/zonca/dst", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/dst"}, {"uid": "github/zonca/python-qucs", "html_url": "https://rseng.github.io/software/repository/github/zonca/python-qucs", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/python-qucs"}, {"uid": "github/tcherninceline/PPInteractions", "html_url": "https://rseng.github.io/software/repository/github/tcherninceline/PPInteractions", "api_url": "https://rseng.github.io/software/api/repos/github/tcherninceline/PPInteractions"}, {"uid": "github/Stuermer/EchelleSimulator", "html_url": "https://rseng.github.io/software/repository/github/Stuermer/EchelleSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/Stuermer/EchelleSimulator"}, {"uid": "github/grahambell/pymoc", "html_url": "https://rseng.github.io/software/repository/github/grahambell/pymoc", "api_url": "https://rseng.github.io/software/api/repos/github/grahambell/pymoc"}, {"uid": "github/jolie/tquery", "html_url": "https://rseng.github.io/software/repository/github/jolie/tquery", "api_url": "https://rseng.github.io/software/api/repos/github/jolie/tquery"}, {"uid": "github/vdemichev/DiaNN", "html_url": "https://rseng.github.io/software/repository/github/vdemichev/DiaNN", "api_url": "https://rseng.github.io/software/api/repos/github/vdemichev/DiaNN"}, {"uid": "github/KonstantinLeyde/light", "html_url": "https://rseng.github.io/software/repository/github/KonstantinLeyde/light", "api_url": "https://rseng.github.io/software/api/repos/github/KonstantinLeyde/light"}, {"uid": "github/vle-prtc/rbef-prtc", "html_url": "https://rseng.github.io/software/repository/github/vle-prtc/rbef-prtc", "api_url": "https://rseng.github.io/software/api/repos/github/vle-prtc/rbef-prtc"}, {"uid": "github/indralab/pybiopax", "html_url": "https://rseng.github.io/software/repository/github/indralab/pybiopax", "api_url": "https://rseng.github.io/software/api/repos/github/indralab/pybiopax"}, {"uid": "github/LeandroOrdonez/explora-vr-dash-client", "html_url": "https://rseng.github.io/software/repository/github/LeandroOrdonez/explora-vr-dash-client", "api_url": "https://rseng.github.io/software/api/repos/github/LeandroOrdonez/explora-vr-dash-client"}, {"uid": "github/pangeo-data/climpred", "html_url": "https://rseng.github.io/software/repository/github/pangeo-data/climpred", "api_url": "https://rseng.github.io/software/api/repos/github/pangeo-data/climpred"}, {"uid": "github/tomoyukif/MCPtaggR", "html_url": "https://rseng.github.io/software/repository/github/tomoyukif/MCPtaggR", "api_url": "https://rseng.github.io/software/api/repos/github/tomoyukif/MCPtaggR"}, {"uid": "github/JiangFangzhou/SIDM", "html_url": "https://rseng.github.io/software/repository/github/JiangFangzhou/SIDM", "api_url": "https://rseng.github.io/software/api/repos/github/JiangFangzhou/SIDM"}, {"uid": "github/jo276/EvapMass", "html_url": "https://rseng.github.io/software/repository/github/jo276/EvapMass", "api_url": "https://rseng.github.io/software/api/repos/github/jo276/EvapMass"}, {"uid": "github/brandonckelly/carma_pack", "html_url": "https://rseng.github.io/software/repository/github/brandonckelly/carma_pack", "api_url": "https://rseng.github.io/software/api/repos/github/brandonckelly/carma_pack"}, {"uid": "github/lastz/lastz", "html_url": "https://rseng.github.io/software/repository/github/lastz/lastz", "api_url": "https://rseng.github.io/software/api/repos/github/lastz/lastz"}, {"uid": "github/mathopt/DynamicOED.jl", "html_url": "https://rseng.github.io/software/repository/github/mathopt/DynamicOED.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mathopt/DynamicOED.jl"}, {"uid": "github/Libensemble/libensemble", "html_url": "https://rseng.github.io/software/repository/github/Libensemble/libensemble", "api_url": "https://rseng.github.io/software/api/repos/github/Libensemble/libensemble"}, {"uid": "github/HorvathLab/ReQTL", "html_url": "https://rseng.github.io/software/repository/github/HorvathLab/ReQTL", "api_url": "https://rseng.github.io/software/api/repos/github/HorvathLab/ReQTL"}, {"uid": "github/kinnala/scikit-fem", "html_url": "https://rseng.github.io/software/repository/github/kinnala/scikit-fem", "api_url": "https://rseng.github.io/software/api/repos/github/kinnala/scikit-fem"}, {"uid": "github/INRS-France/predicting_alarm_audibility", "html_url": "https://rseng.github.io/software/repository/github/INRS-France/predicting_alarm_audibility", "api_url": "https://rseng.github.io/software/api/repos/github/INRS-France/predicting_alarm_audibility"}, {"uid": "github/mdruett/COCOPLOT", "html_url": "https://rseng.github.io/software/repository/github/mdruett/COCOPLOT", "api_url": "https://rseng.github.io/software/api/repos/github/mdruett/COCOPLOT"}, {"uid": "github/ebmonson/2DFFTUtils-Module", "html_url": "https://rseng.github.io/software/repository/github/ebmonson/2DFFTUtils-Module", "api_url": "https://rseng.github.io/software/api/repos/github/ebmonson/2DFFTUtils-Module"}, {"uid": "github/BGI-Qingdao/TGS-GapCloser", "html_url": "https://rseng.github.io/software/repository/github/BGI-Qingdao/TGS-GapCloser", "api_url": "https://rseng.github.io/software/api/repos/github/BGI-Qingdao/TGS-GapCloser"}, {"uid": "github/giuspugl/picasso", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/picasso"}, {"uid": "github/giuspugl/MCMole3D", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/MCMole3D", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/MCMole3D"}, {"uid": "github/giuspugl/COnet", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/COnet", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/COnet"}, {"uid": "github/giuspugl/fgcluster", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/fgcluster", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/fgcluster"}, {"uid": "github/ElectionDataAnalysis/electiondata", "html_url": "https://rseng.github.io/software/repository/github/ElectionDataAnalysis/electiondata", "api_url": "https://rseng.github.io/software/api/repos/github/ElectionDataAnalysis/electiondata"}, {"uid": "github/mary77/scQcut", "html_url": "https://rseng.github.io/software/repository/github/mary77/scQcut", "api_url": "https://rseng.github.io/software/api/repos/github/mary77/scQcut"}, {"uid": "github/PopMedNet-Team/popmednet", "html_url": "https://rseng.github.io/software/repository/github/PopMedNet-Team/popmednet", "api_url": "https://rseng.github.io/software/api/repos/github/PopMedNet-Team/popmednet"}, {"uid": "github/ICSC-Spoke3/NP_TMcode", "html_url": "https://rseng.github.io/software/repository/github/ICSC-Spoke3/NP_TMcode", "api_url": "https://rseng.github.io/software/api/repos/github/ICSC-Spoke3/NP_TMcode"}, {"uid": "github/raphael-group/chisel", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/chisel", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/chisel"}, {"uid": "github/raphael-group/hatchet", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/hatchet", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/hatchet"}, {"uid": "github/gabraham/flashpca", "html_url": "https://rseng.github.io/software/repository/github/gabraham/flashpca", "api_url": "https://rseng.github.io/software/api/repos/github/gabraham/flashpca"}, {"uid": "github/statOmics/satuRnPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/satuRnPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/satuRnPaper"}, {"uid": "github/statOmics/tradeSeqPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/tradeSeqPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/tradeSeqPaper"}, {"uid": "github/GeoscienceAustralia/eo-tides", "html_url": "https://rseng.github.io/software/repository/github/GeoscienceAustralia/eo-tides", "api_url": "https://rseng.github.io/software/api/repos/github/GeoscienceAustralia/eo-tides"}, {"uid": "github/MonashSmartStructures/ospgrillage", "html_url": "https://rseng.github.io/software/repository/github/MonashSmartStructures/ospgrillage", "api_url": "https://rseng.github.io/software/api/repos/github/MonashSmartStructures/ospgrillage"}, {"uid": "github/wdecoster/nanoQC", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoQC", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoQC"}, {"uid": "github/wdecoster/nano-snakemake", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nano-snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nano-snakemake"}, {"uid": "github/wdecoster/NanoComp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoComp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoComp"}, {"uid": "github/wdecoster/nanocomp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanocomp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanocomp"}, {"uid": "github/wdecoster/nanomath", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanomath", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanomath"}, {"uid": "github/wdecoster/nanopack", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanopack", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanopack"}, {"uid": "github/wdecoster/nanostat", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanostat", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanostat"}, {"uid": "github/wdecoster/nanolyse", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanolyse", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanolyse"}, {"uid": "github/wdecoster/nanofilt", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanofilt", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanofilt"}, {"uid": "github/wdecoster/NanoPlot", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoPlot", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoPlot"}, {"uid": "github/wdecoster/nanoget", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoget", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoget"}, {"uid": "github/wdecoster/chopper", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/chopper", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/chopper"}, {"uid": "github/Patrick-Cole/pygmi", "html_url": "https://rseng.github.io/software/repository/github/Patrick-Cole/pygmi", "api_url": "https://rseng.github.io/software/api/repos/github/Patrick-Cole/pygmi"}, {"uid": "github/scverse/scanpy", "html_url": "https://rseng.github.io/software/repository/github/scverse/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/scanpy"}, {"uid": "github/scverse/muon", "html_url": "https://rseng.github.io/software/repository/github/scverse/muon", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/muon"}, {"uid": "github/scverse/anndata", "html_url": "https://rseng.github.io/software/repository/github/scverse/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/anndata"}, {"uid": "github/EliseJ/astroABC", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/astroABC", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/astroABC"}, {"uid": "github/EliseJ/superabc", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/superabc", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/superabc"}, {"uid": "github/legacysurvey/unwise_psf", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/unwise_psf", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/unwise_psf"}, {"uid": "github/legacysurvey/legacypipe", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/legacypipe", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/legacypipe"}, {"uid": "github/basp-group/purify", "html_url": "https://rseng.github.io/software/repository/github/basp-group/purify", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/purify"}, {"uid": "github/basp-group/Puri-Psi", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Puri-Psi", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Puri-Psi"}, {"uid": "github/basp-group/R2D2-RI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-RI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-RI"}, {"uid": "github/basp-group/faceted-hypersara", "html_url": "https://rseng.github.io/software/repository/github/basp-group/faceted-hypersara", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/faceted-hypersara"}, {"uid": "github/basp-group/SARA-PPD", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-PPD", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-PPD"}, {"uid": "github/basp-group/BUQO", "html_url": "https://rseng.github.io/software/repository/github/basp-group/BUQO", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/BUQO"}, {"uid": "github/basp-group/AIRI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/AIRI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/AIRI"}, {"uid": "github/basp-group/R2D2-SII", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-SII", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-SII"}, {"uid": "github/basp-group/sopt", "html_url": "https://rseng.github.io/software/repository/github/basp-group/sopt", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/sopt"}, {"uid": "github/basp-group/Optical-Interferometry-Trilinear", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Optical-Interferometry-Trilinear", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Optical-Interferometry-Trilinear"}, {"uid": "github/basp-group/SARA-dimensionality-reduction", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-dimensionality-reduction", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-dimensionality-reduction"}, {"uid": "github/sahasuparna/DeMoS", "html_url": "https://rseng.github.io/software/repository/github/sahasuparna/DeMoS", "api_url": "https://rseng.github.io/software/api/repos/github/sahasuparna/DeMoS"}, {"uid": "github/CLARIAH/grlc", "html_url": "https://rseng.github.io/software/repository/github/CLARIAH/grlc", "api_url": "https://rseng.github.io/software/api/repos/github/CLARIAH/grlc"}, {"uid": "github/Higgins00/TESS-Localize", "html_url": "https://rseng.github.io/software/repository/github/Higgins00/TESS-Localize", "api_url": "https://rseng.github.io/software/api/repos/github/Higgins00/TESS-Localize"}, {"uid": "github/peterspackman/occ", "html_url": "https://rseng.github.io/software/repository/github/peterspackman/occ", "api_url": "https://rseng.github.io/software/api/repos/github/peterspackman/occ"}, {"uid": "github/LLNL/popclass", "html_url": "https://rseng.github.io/software/repository/github/LLNL/popclass", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/popclass"}, {"uid": "github/LLNL/SSAPy", "html_url": "https://rseng.github.io/software/repository/github/LLNL/SSAPy", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/SSAPy"}, {"uid": "github/LLNL/echemfem", "html_url": "https://rseng.github.io/software/repository/github/LLNL/echemfem", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/echemfem"}, {"uid": "github/cholla-hydro/cholla", "html_url": "https://rseng.github.io/software/repository/github/cholla-hydro/cholla", "api_url": "https://rseng.github.io/software/api/repos/github/cholla-hydro/cholla"}, {"uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", "html_url": "https://rseng.github.io/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", "api_url": "https://rseng.github.io/software/api/repos/github/joergbuchwald/joss_ogs6py_VTUinterface"}, {"uid": "github/debian-tex/texlive-nonbin", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/texlive-nonbin", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/texlive-nonbin"}, {"uid": "github/debian-tex/biber", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/biber", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/biber"}, {"uid": "github/Alymantara/pydoppler", "html_url": "https://rseng.github.io/software/repository/github/Alymantara/pydoppler", "api_url": "https://rseng.github.io/software/api/repos/github/Alymantara/pydoppler"}, {"uid": "github/MOSAICS-NIH/MOSAICS", "html_url": "https://rseng.github.io/software/repository/github/MOSAICS-NIH/MOSAICS", "api_url": "https://rseng.github.io/software/api/repos/github/MOSAICS-NIH/MOSAICS"}, {"uid": "github/hendr1km/dropout", "html_url": "https://rseng.github.io/software/repository/github/hendr1km/dropout", "api_url": "https://rseng.github.io/software/api/repos/github/hendr1km/dropout"}, {"uid": "github/coolneighbors/unwise-verse", "html_url": "https://rseng.github.io/software/repository/github/coolneighbors/unwise-verse", "api_url": "https://rseng.github.io/software/api/repos/github/coolneighbors/unwise-verse"}, {"uid": "github/mj-will/nessai", "html_url": "https://rseng.github.io/software/repository/github/mj-will/nessai", "api_url": "https://rseng.github.io/software/api/repos/github/mj-will/nessai"}, {"uid": "github/ruta-k/uGMRT-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ruta-k/uGMRT-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ruta-k/uGMRT-pipeline"}, {"uid": "github/mateidavid/nanocall", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/nanocall", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/nanocall"}, {"uid": "github/mateidavid/fast5", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/fast5", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/fast5"}, {"uid": "github/dazhwu/pydynpd", "html_url": "https://rseng.github.io/software/repository/github/dazhwu/pydynpd", "api_url": "https://rseng.github.io/software/api/repos/github/dazhwu/pydynpd"}, {"uid": "github/deepskies/DeepBench", "html_url": "https://rseng.github.io/software/repository/github/deepskies/DeepBench", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/DeepBench"}, {"uid": "github/deepskies/deeplenstronomy", "html_url": "https://rseng.github.io/software/repository/github/deepskies/deeplenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/deeplenstronomy"}, {"uid": "github/sevenstarknight/VariableStarAnalysis", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/VariableStarAnalysis", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/VariableStarAnalysis"}, {"uid": "github/sevenstarknight/OCDetector", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/OCDetector", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/OCDetector"}, {"uid": "github/sevenstarknight/SSMM", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/SSMM", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/SSMM"}, {"uid": "github/sevenstarknight/LINEARSupervisedClassification", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/LINEARSupervisedClassification", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/LINEARSupervisedClassification"}, {"uid": "github/AlmaasLab/csdR", "html_url": "https://rseng.github.io/software/repository/github/AlmaasLab/csdR", "api_url": "https://rseng.github.io/software/api/repos/github/AlmaasLab/csdR"}, {"uid": "github/JuliaHEP/UnROOT.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHEP/UnROOT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHEP/UnROOT.jl"}, {"uid": "github/minaskar/zeus", "html_url": "https://rseng.github.io/software/repository/github/minaskar/zeus", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/zeus"}, {"uid": "github/minaskar/pocomc", "html_url": "https://rseng.github.io/software/repository/github/minaskar/pocomc", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/pocomc"}, {"uid": "github/minaskar/hankl", "html_url": "https://rseng.github.io/software/repository/github/minaskar/hankl", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/hankl"}, {"uid": "github/annayqho/TheCannon", "html_url": "https://rseng.github.io/software/repository/github/annayqho/TheCannon", "api_url": "https://rseng.github.io/software/api/repos/github/annayqho/TheCannon"}, {"uid": "github/jonbmartin/pulpy", "html_url": "https://rseng.github.io/software/repository/github/jonbmartin/pulpy", "api_url": "https://rseng.github.io/software/api/repos/github/jonbmartin/pulpy"}, {"uid": "github/gdalle/HiddenMarkovModels.jl", "html_url": "https://rseng.github.io/software/repository/github/gdalle/HiddenMarkovModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gdalle/HiddenMarkovModels.jl"}, {"uid": "github/SarveshVGharat/Plages-Identification", "html_url": "https://rseng.github.io/software/repository/github/SarveshVGharat/Plages-Identification", "api_url": "https://rseng.github.io/software/api/repos/github/SarveshVGharat/Plages-Identification"}, {"uid": "github/auranic/ClinTrajan", "html_url": "https://rseng.github.io/software/repository/github/auranic/ClinTrajan", "api_url": "https://rseng.github.io/software/api/repos/github/auranic/ClinTrajan"}, {"uid": "github/patrickfuchs/buildH", "html_url": "https://rseng.github.io/software/repository/github/patrickfuchs/buildH", "api_url": "https://rseng.github.io/software/api/repos/github/patrickfuchs/buildH"}, {"uid": "github/marius311/cosmoslik", "html_url": "https://rseng.github.io/software/repository/github/marius311/cosmoslik", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/cosmoslik"}, {"uid": "github/marius311/pypico", "html_url": "https://rseng.github.io/software/repository/github/marius311/pypico", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/pypico"}, {"uid": "github/mdshw5/pyfaidx", "html_url": "https://rseng.github.io/software/repository/github/mdshw5/pyfaidx", "api_url": "https://rseng.github.io/software/api/repos/github/mdshw5/pyfaidx"}, {"uid": "github/horovod/horovod", "html_url": "https://rseng.github.io/software/repository/github/horovod/horovod", "api_url": "https://rseng.github.io/software/api/repos/github/horovod/horovod"}, {"uid": "github/justinmathias/isocalcR", "html_url": "https://rseng.github.io/software/repository/github/justinmathias/isocalcR", "api_url": "https://rseng.github.io/software/api/repos/github/justinmathias/isocalcR"}, {"uid": "github/dipangwvu/SPEGID", "html_url": "https://rseng.github.io/software/repository/github/dipangwvu/SPEGID", "api_url": "https://rseng.github.io/software/api/repos/github/dipangwvu/SPEGID"}, {"uid": "github/ylab-hi/ScanITD", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanITD", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanITD"}, {"uid": "github/ylab-hi/ScanExitronLR", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanExitronLR", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanExitronLR"}, {"uid": "github/sntioudis/papreca", "html_url": "https://rseng.github.io/software/repository/github/sntioudis/papreca", "api_url": "https://rseng.github.io/software/api/repos/github/sntioudis/papreca"}, {"uid": "github/lydialucchesi/Vizumap", "html_url": "https://rseng.github.io/software/repository/github/lydialucchesi/Vizumap", "api_url": "https://rseng.github.io/software/api/repos/github/lydialucchesi/Vizumap"}, {"uid": "github/lukapecnik/NiaAML", "html_url": "https://rseng.github.io/software/repository/github/lukapecnik/NiaAML", "api_url": "https://rseng.github.io/software/api/repos/github/lukapecnik/NiaAML"}, {"uid": "github/rvandewater/ReciPies", "html_url": "https://rseng.github.io/software/repository/github/rvandewater/ReciPies", "api_url": "https://rseng.github.io/software/api/repos/github/rvandewater/ReciPies"}, {"uid": "github/flemingtonlab/SpliceV", "html_url": "https://rseng.github.io/software/repository/github/flemingtonlab/SpliceV", "api_url": "https://rseng.github.io/software/api/repos/github/flemingtonlab/SpliceV"}, {"uid": "github/rhpvorderman/sequali", "html_url": "https://rseng.github.io/software/repository/github/rhpvorderman/sequali", "api_url": "https://rseng.github.io/software/api/repos/github/rhpvorderman/sequali"}, {"uid": "github/keflavich/HiGal_SEDfitter", "html_url": "https://rseng.github.io/software/repository/github/keflavich/HiGal_SEDfitter", "api_url": "https://rseng.github.io/software/api/repos/github/keflavich/HiGal_SEDfitter"}, {"uid": "github/gogrean/PyXel", "html_url": "https://rseng.github.io/software/repository/github/gogrean/PyXel", "api_url": "https://rseng.github.io/software/api/repos/github/gogrean/PyXel"}, {"uid": "github/zdelrosario/py_grama", "html_url": "https://rseng.github.io/software/repository/github/zdelrosario/py_grama", "api_url": "https://rseng.github.io/software/api/repos/github/zdelrosario/py_grama"}, {"uid": "github/FourierFlows/GeophysicalFlows.jl", "html_url": "https://rseng.github.io/software/repository/github/FourierFlows/GeophysicalFlows.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FourierFlows/GeophysicalFlows.jl"}, {"uid": "github/cheerfuluser/tessreduce", "html_url": "https://rseng.github.io/software/repository/github/cheerfuluser/tessreduce", "api_url": "https://rseng.github.io/software/api/repos/github/cheerfuluser/tessreduce"}, {"uid": "github/fbartolic/volcano", "html_url": "https://rseng.github.io/software/repository/github/fbartolic/volcano", "api_url": "https://rseng.github.io/software/api/repos/github/fbartolic/volcano"}, {"uid": "github/jw-lin/lightbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/lightbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/lightbeam"}, {"uid": "github/jw-lin/cbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/cbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/cbeam"}, {"uid": "github/technic960183/spherimatch", "html_url": "https://rseng.github.io/software/repository/github/technic960183/spherimatch", "api_url": "https://rseng.github.io/software/api/repos/github/technic960183/spherimatch"}, {"uid": "github/ByrumLab/proteoDA", "html_url": "https://rseng.github.io/software/repository/github/ByrumLab/proteoDA", "api_url": "https://rseng.github.io/software/api/repos/github/ByrumLab/proteoDA"}, {"uid": "github/VNNikolaidis/nnlib2Rcpp", "html_url": "https://rseng.github.io/software/repository/github/VNNikolaidis/nnlib2Rcpp", "api_url": "https://rseng.github.io/software/api/repos/github/VNNikolaidis/nnlib2Rcpp"}, {"uid": "github/swiss-seismological-service/DUGseis", "html_url": "https://rseng.github.io/software/repository/github/swiss-seismological-service/DUGseis", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-seismological-service/DUGseis"}, {"uid": "github/arcaldwell49/SimplyAgree", "html_url": "https://rseng.github.io/software/repository/github/arcaldwell49/SimplyAgree", "api_url": "https://rseng.github.io/software/api/repos/github/arcaldwell49/SimplyAgree"}, {"uid": "github/morpheus-project/morpheus", "html_url": "https://rseng.github.io/software/repository/github/morpheus-project/morpheus", "api_url": "https://rseng.github.io/software/api/repos/github/morpheus-project/morpheus"}, {"uid": "github/MultiQC/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/MultiQC/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/MultiQC/MultiQC"}, {"uid": "github/biswajitmb/DarpanX", "html_url": "https://rseng.github.io/software/repository/github/biswajitmb/DarpanX", "api_url": "https://rseng.github.io/software/api/repos/github/biswajitmb/DarpanX"}, {"uid": "github/hauselin/ollama-r", "html_url": "https://rseng.github.io/software/repository/github/hauselin/ollama-r", "api_url": "https://rseng.github.io/software/api/repos/github/hauselin/ollama-r"}, {"uid": "github/phipsonlab/propeller-paper-analysis", "html_url": "https://rseng.github.io/software/repository/github/phipsonlab/propeller-paper-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phipsonlab/propeller-paper-analysis"}, {"uid": "github/PabloVD/CosmoGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/CosmoGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/CosmoGraphNet"}, {"uid": "github/PabloVD/HaloGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HaloGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HaloGraphNet"}, {"uid": "github/PabloVD/21cmDeepLearning", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/21cmDeepLearning", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/21cmDeepLearning"}, {"uid": "github/PabloVD/HAYASHI", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HAYASHI", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HAYASHI"}, {"uid": "github/galaxyproject/ansible-tiaas2", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/ansible-tiaas2", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/ansible-tiaas2"}, {"uid": "github/galaxyproject/galaxy-lib", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/galaxy-lib", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/galaxy-lib"}, {"uid": "github/mzechmeister/viper", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/viper", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/viper"}, {"uid": "github/mzechmeister/serval", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/serval", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/serval"}, {"uid": "github/gridap/GridapSolvers.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/GridapSolvers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/GridapSolvers.jl"}, {"uid": "github/gridap/Gridap.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/Gridap.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/Gridap.jl"}, {"uid": "github/GeoArkadeep/Stresslog", "html_url": "https://rseng.github.io/software/repository/github/GeoArkadeep/Stresslog", "api_url": "https://rseng.github.io/software/api/repos/github/GeoArkadeep/Stresslog"}, {"uid": "github/HAWinther/FML", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/FML", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/FML"}, {"uid": "github/HAWinther/MG-PICOLA-PUBLIC", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/MG-PICOLA-PUBLIC"}, {"uid": "github/robin-janssen/CODES-Benchmark", "html_url": "https://rseng.github.io/software/repository/github/robin-janssen/CODES-Benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/robin-janssen/CODES-Benchmark"}, {"uid": "github/MichielCottaar/velbin", "html_url": "https://rseng.github.io/software/repository/github/MichielCottaar/velbin", "api_url": "https://rseng.github.io/software/api/repos/github/MichielCottaar/velbin"}, {"uid": "github/jcibanezm/DustCharge", "html_url": "https://rseng.github.io/software/repository/github/jcibanezm/DustCharge", "api_url": "https://rseng.github.io/software/api/repos/github/jcibanezm/DustCharge"}, {"uid": "github/arq5x/poretools", "html_url": "https://rseng.github.io/software/repository/github/arq5x/poretools", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/poretools"}, {"uid": "github/arq5x/bedtools2", "html_url": "https://rseng.github.io/software/repository/github/arq5x/bedtools2", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/bedtools2"}, {"uid": "github/arq5x/lumpy-sv", "html_url": "https://rseng.github.io/software/repository/github/arq5x/lumpy-sv", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/lumpy-sv"}, {"uid": "github/arq5x/grabix", "html_url": "https://rseng.github.io/software/repository/github/arq5x/grabix", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/grabix"}, {"uid": "github/sib-swiss/pftools3", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/pftools3", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/pftools3"}, {"uid": "github/sib-swiss/glittr", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/glittr", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/glittr"}, {"uid": "github/Brauckhoff/biopixR", "html_url": "https://rseng.github.io/software/repository/github/Brauckhoff/biopixR", "api_url": "https://rseng.github.io/software/api/repos/github/Brauckhoff/biopixR"}, {"uid": "github/saphir746/BiobankRead-Bash", "html_url": "https://rseng.github.io/software/repository/github/saphir746/BiobankRead-Bash", "api_url": "https://rseng.github.io/software/api/repos/github/saphir746/BiobankRead-Bash"}, {"uid": "github/combustiontoolbox/combustion_toolbox", "html_url": "https://rseng.github.io/software/repository/github/combustiontoolbox/combustion_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/combustiontoolbox/combustion_toolbox"}, {"uid": "github/pyroll-project/pyroll-core", "html_url": "https://rseng.github.io/software/repository/github/pyroll-project/pyroll-core", "api_url": "https://rseng.github.io/software/api/repos/github/pyroll-project/pyroll-core"}, {"uid": "github/exciting/excitingtools", "html_url": "https://rseng.github.io/software/repository/github/exciting/excitingtools", "api_url": "https://rseng.github.io/software/api/repos/github/exciting/excitingtools"}, {"uid": "github/BU-hammerTeam/PyHammer", "html_url": "https://rseng.github.io/software/repository/github/BU-hammerTeam/PyHammer", "api_url": "https://rseng.github.io/software/api/repos/github/BU-hammerTeam/PyHammer"}, {"uid": "github/geodynamics/Rayleigh", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/Rayleigh", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/Rayleigh"}, {"uid": "github/geodynamics/burnman", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/burnman", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/burnman"}, {"uid": "github/cbielow/PTXQC", "html_url": "https://rseng.github.io/software/repository/github/cbielow/PTXQC", "api_url": "https://rseng.github.io/software/api/repos/github/cbielow/PTXQC"}, {"uid": "github/lskatz/fasten", "html_url": "https://rseng.github.io/software/repository/github/lskatz/fasten", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/fasten"}, {"uid": "github/lskatz/SneakerNet", "html_url": "https://rseng.github.io/software/repository/github/lskatz/SneakerNet", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/SneakerNet"}, {"uid": "github/myinxd/mcrgnet", "html_url": "https://rseng.github.io/software/repository/github/myinxd/mcrgnet", "api_url": "https://rseng.github.io/software/api/repos/github/myinxd/mcrgnet"}, {"uid": "github/hyriver/hysetter", "html_url": "https://rseng.github.io/software/repository/github/hyriver/hysetter", "api_url": "https://rseng.github.io/software/api/repos/github/hyriver/hysetter"}, {"uid": "github/Filter-Bubble/e2e-Dutch", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/e2e-Dutch", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/e2e-Dutch"}, {"uid": "github/Filter-Bubble/stroll", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/stroll", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/stroll"}, {"uid": "github/mwanakijiji/rrlfe", "html_url": "https://rseng.github.io/software/repository/github/mwanakijiji/rrlfe", "api_url": "https://rseng.github.io/software/api/repos/github/mwanakijiji/rrlfe"}, {"uid": "github/hugoledoux/startinpy", "html_url": "https://rseng.github.io/software/repository/github/hugoledoux/startinpy", "api_url": "https://rseng.github.io/software/api/repos/github/hugoledoux/startinpy"}, {"uid": "github/GOBLIN-Proj/goblin_lite", "html_url": "https://rseng.github.io/software/repository/github/GOBLIN-Proj/goblin_lite", "api_url": "https://rseng.github.io/software/api/repos/github/GOBLIN-Proj/goblin_lite"}, {"uid": "github/sethspjohnso/satmc", "html_url": "https://rseng.github.io/software/repository/github/sethspjohnso/satmc", "api_url": "https://rseng.github.io/software/api/repos/github/sethspjohnso/satmc"}, {"uid": "github/daniloceano/LorenzCycleToolkit", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/LorenzCycleToolkit", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/LorenzCycleToolkit"}, {"uid": "github/daniloceano/CycloPhaser", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/CycloPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/CycloPhaser"}, {"uid": "github/era-urban/wrfpy", "html_url": "https://rseng.github.io/software/repository/github/era-urban/wrfpy", "api_url": "https://rseng.github.io/software/api/repos/github/era-urban/wrfpy"}, {"uid": "github/smithlabcode/dnmtools", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/dnmtools", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/dnmtools"}, {"uid": "github/smithlabcode/falco", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/falco", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/falco"}, {"uid": "github/smithlabcode/preseq", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/preseq", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/preseq"}, {"uid": "github/smithlabcode/abismal", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/abismal", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/abismal"}, {"uid": "github/csbioinfopk/iSumoK-PseAAC", "html_url": "https://rseng.github.io/software/repository/github/csbioinfopk/iSumoK-PseAAC", "api_url": "https://rseng.github.io/software/api/repos/github/csbioinfopk/iSumoK-PseAAC"}, {"uid": "github/ashleyblawas/respdetect", "html_url": "https://rseng.github.io/software/repository/github/ashleyblawas/respdetect", "api_url": "https://rseng.github.io/software/api/repos/github/ashleyblawas/respdetect"}, {"uid": "github/NKI-AI/direct", "html_url": "https://rseng.github.io/software/repository/github/NKI-AI/direct", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-AI/direct"}, {"uid": "github/sPaMFouR/RedPipe", "html_url": "https://rseng.github.io/software/repository/github/sPaMFouR/RedPipe", "api_url": "https://rseng.github.io/software/api/repos/github/sPaMFouR/RedPipe"}, {"uid": "github/VMBoehm/MADLens", "html_url": "https://rseng.github.io/software/repository/github/VMBoehm/MADLens", "api_url": "https://rseng.github.io/software/api/repos/github/VMBoehm/MADLens"}, {"uid": "github/tobiasrausch/alfred", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/alfred", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/alfred"}, {"uid": "github/tobiasrausch/wally", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/wally", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/wally"}, {"uid": "github/tobiasrausch/lorax", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/lorax", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/lorax"}, {"uid": "github/JulianKarlBauer/mechkit", "html_url": "https://rseng.github.io/software/repository/github/JulianKarlBauer/mechkit", "api_url": "https://rseng.github.io/software/api/repos/github/JulianKarlBauer/mechkit"}, {"uid": "github/ImproPhoto/pymicmac", "html_url": "https://rseng.github.io/software/repository/github/ImproPhoto/pymicmac", "api_url": "https://rseng.github.io/software/api/repos/github/ImproPhoto/pymicmac"}, {"uid": "github/MikeHeiber/Excimontec", "html_url": "https://rseng.github.io/software/repository/github/MikeHeiber/Excimontec", "api_url": "https://rseng.github.io/software/api/repos/github/MikeHeiber/Excimontec"}, {"uid": "github/anmolter/XLUR", "html_url": "https://rseng.github.io/software/repository/github/anmolter/XLUR", "api_url": "https://rseng.github.io/software/api/repos/github/anmolter/XLUR"}, {"uid": "github/poldracklab/mriqc", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/mriqc", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/mriqc"}, {"uid": "github/poldracklab/nitransforms", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/nitransforms", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/nitransforms"}, {"uid": "github/miniufo/xinvert", "html_url": "https://rseng.github.io/software/repository/github/miniufo/xinvert", "api_url": "https://rseng.github.io/software/api/repos/github/miniufo/xinvert"}, {"uid": "github/cwru-pat/cosmograph", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cosmograph", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cosmograph"}, {"uid": "github/cwru-pat/cmb-multipole_vectors", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cmb-multipole_vectors", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cmb-multipole_vectors"}, {"uid": "github/DOnghiaGroup/MGwave", "html_url": "https://rseng.github.io/software/repository/github/DOnghiaGroup/MGwave", "api_url": "https://rseng.github.io/software/api/repos/github/DOnghiaGroup/MGwave"}, {"uid": "github/seeh/surprise", "html_url": "https://rseng.github.io/software/repository/github/seeh/surprise", "api_url": "https://rseng.github.io/software/api/repos/github/seeh/surprise"}, {"uid": "github/openmm/openmm", "html_url": "https://rseng.github.io/software/repository/github/openmm/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/openmm/openmm"}, {"uid": "github/pinellolab/STREAM", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/STREAM", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/STREAM"}, {"uid": "github/pinellolab/CRISPRitz", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPRitz", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPRitz"}, {"uid": "github/pinellolab/CRISPResso2", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPResso2", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPResso2"}, {"uid": "github/stefanradev93/BayesFlow", "html_url": "https://rseng.github.io/software/repository/github/stefanradev93/BayesFlow", "api_url": "https://rseng.github.io/software/api/repos/github/stefanradev93/BayesFlow"}, {"uid": "github/cire-thk/BifacialSimu", "html_url": "https://rseng.github.io/software/repository/github/cire-thk/BifacialSimu", "api_url": "https://rseng.github.io/software/api/repos/github/cire-thk/BifacialSimu"}, {"uid": "github/lazear/sage", "html_url": "https://rseng.github.io/software/repository/github/lazear/sage", "api_url": "https://rseng.github.io/software/api/repos/github/lazear/sage"}, {"uid": "github/ElsevierSoftwareX/SOFTX_2020_119", "html_url": "https://rseng.github.io/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", "api_url": "https://rseng.github.io/software/api/repos/github/ElsevierSoftwareX/SOFTX_2020_119"}, {"uid": "github/RichardPIII/Cumulative-Time-Dilation", "html_url": "https://rseng.github.io/software/repository/github/RichardPIII/Cumulative-Time-Dilation", "api_url": "https://rseng.github.io/software/api/repos/github/RichardPIII/Cumulative-Time-Dilation"}, {"uid": "github/SPARTA-dev/SPARTA", "html_url": "https://rseng.github.io/software/repository/github/SPARTA-dev/SPARTA", "api_url": "https://rseng.github.io/software/api/repos/github/SPARTA-dev/SPARTA"}, {"uid": "github/PaulMcMillan-Astro/Torus", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/Torus", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/Torus"}, {"uid": "github/PaulMcMillan-Astro/GalPot", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/GalPot", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/GalPot"}, {"uid": "github/nbellomo/Multi_CLASS", "html_url": "https://rseng.github.io/software/repository/github/nbellomo/Multi_CLASS", "api_url": "https://rseng.github.io/software/api/repos/github/nbellomo/Multi_CLASS"}, {"uid": "github/biobakery/halla", "html_url": "https://rseng.github.io/software/repository/github/biobakery/halla", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/halla"}, {"uid": "github/biobakery/MetaPhlAn", "html_url": "https://rseng.github.io/software/repository/github/biobakery/MetaPhlAn", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/MetaPhlAn"}, {"uid": "github/biobakery/phylophlan", "html_url": "https://rseng.github.io/software/repository/github/biobakery/phylophlan", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/phylophlan"}, {"uid": "github/eas342/tshirt", "html_url": "https://rseng.github.io/software/repository/github/eas342/tshirt", "api_url": "https://rseng.github.io/software/api/repos/github/eas342/tshirt"}, {"uid": "github/tonhingm/PHOTOe-v1", "html_url": "https://rseng.github.io/software/repository/github/tonhingm/PHOTOe-v1", "api_url": "https://rseng.github.io/software/api/repos/github/tonhingm/PHOTOe-v1"}, {"uid": "github/MichaelDAlbrow/CMDFitter", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/CMDFitter", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/CMDFitter"}, {"uid": "github/MichaelDAlbrow/pyDIA", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/pyDIA", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/pyDIA"}, {"uid": "github/MichaelDAlbrow/Dazzle", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/Dazzle", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/Dazzle"}, {"uid": "github/JulianBMunoz/RelicFast", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/RelicFast", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/RelicFast"}, {"uid": "github/JulianBMunoz/Zeus21", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/Zeus21", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/Zeus21"}, {"uid": "github/JulianBMunoz/21cmvFAST", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/21cmvFAST", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/21cmvFAST"}, {"uid": "github/fdebras/ECLIPS3D", "html_url": "https://rseng.github.io/software/repository/github/fdebras/ECLIPS3D", "api_url": "https://rseng.github.io/software/api/repos/github/fdebras/ECLIPS3D"}, {"uid": "github/kundajelab/phantompeakqualtools", "html_url": "https://rseng.github.io/software/repository/github/kundajelab/phantompeakqualtools", "api_url": "https://rseng.github.io/software/api/repos/github/kundajelab/phantompeakqualtools"}, {"uid": "github/chihchunhsu/smart", "html_url": "https://rseng.github.io/software/repository/github/chihchunhsu/smart", "api_url": "https://rseng.github.io/software/api/repos/github/chihchunhsu/smart"}, {"uid": "github/wokast/RePrimAnd", "html_url": "https://rseng.github.io/software/repository/github/wokast/RePrimAnd", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/RePrimAnd"}, {"uid": "github/wokast/PyCactus", "html_url": "https://rseng.github.io/software/repository/github/wokast/PyCactus", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/PyCactus"}, {"uid": "github/jakelangham/kestrel", "html_url": "https://rseng.github.io/software/repository/github/jakelangham/kestrel", "api_url": "https://rseng.github.io/software/api/repos/github/jakelangham/kestrel"}, {"uid": "github/insilicomedicine/GENTRL", "html_url": "https://rseng.github.io/software/repository/github/insilicomedicine/GENTRL", "api_url": "https://rseng.github.io/software/api/repos/github/insilicomedicine/GENTRL"}, {"uid": "github/scikit-image/scikit-image", "html_url": "https://rseng.github.io/software/repository/github/scikit-image/scikit-image", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-image/scikit-image"}, {"uid": "github/JustinYKC/FEPOPS", "html_url": "https://rseng.github.io/software/repository/github/JustinYKC/FEPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/JustinYKC/FEPOPS"}, {"uid": "github/wilkelab/Opfi", "html_url": "https://rseng.github.io/software/repository/github/wilkelab/Opfi", "api_url": "https://rseng.github.io/software/api/repos/github/wilkelab/Opfi"}, {"uid": "github/thiago-glissoi/FFF-Line-Segmentation", "html_url": "https://rseng.github.io/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/thiago-glissoi/FFF-Line-Segmentation"}, {"uid": "github/pavanvyn/triple-stability", "html_url": "https://rseng.github.io/software/repository/github/pavanvyn/triple-stability", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvyn/triple-stability"}, {"uid": "github/statistical-thinking/KI.ENNA", "html_url": "https://rseng.github.io/software/repository/github/statistical-thinking/KI.ENNA", "api_url": "https://rseng.github.io/software/api/repos/github/statistical-thinking/KI.ENNA"}, {"uid": "github/BioGenies/AMPBenchmark", "html_url": "https://rseng.github.io/software/repository/github/BioGenies/AMPBenchmark", "api_url": "https://rseng.github.io/software/api/repos/github/BioGenies/AMPBenchmark"}, {"uid": "github/ggobi/ggobi", "html_url": "https://rseng.github.io/software/repository/github/ggobi/ggobi", "api_url": "https://rseng.github.io/software/api/repos/github/ggobi/ggobi"}, {"uid": "github/bcgsc/ntHash", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntHash", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntHash"}, {"uid": "github/bcgsc/goldrush", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/goldrush", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/goldrush"}, {"uid": "github/bcgsc/TMBur", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/TMBur", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/TMBur"}, {"uid": "github/bcgsc/longstitch", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/longstitch", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/longstitch"}, {"uid": "github/bcgsc/ntCard", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntCard", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntCard"}, {"uid": "github/bcgsc/NanoSim", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/NanoSim", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/NanoSim"}, {"uid": "github/bcgsc/arcs", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/arcs", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/arcs"}, {"uid": "github/bcgsc/btllib", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/btllib", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/btllib"}, {"uid": "github/bcgsc/abyss", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/abyss", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/abyss"}, {"uid": "github/bcgsc/tigmint", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/tigmint", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/tigmint"}, {"uid": "github/YangLab/RNAlight", "html_url": "https://rseng.github.io/software/repository/github/YangLab/RNAlight", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/RNAlight"}, {"uid": "github/YangLab/CIRCexplorer2", "html_url": "https://rseng.github.io/software/repository/github/YangLab/CIRCexplorer2", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/CIRCexplorer2"}, {"uid": "github/schlafly/crowdsource", "html_url": "https://rseng.github.io/software/repository/github/schlafly/crowdsource", "api_url": "https://rseng.github.io/software/api/repos/github/schlafly/crowdsource"}, {"uid": "github/ToHanwei/Genome2OR", "html_url": "https://rseng.github.io/software/repository/github/ToHanwei/Genome2OR", "api_url": "https://rseng.github.io/software/api/repos/github/ToHanwei/Genome2OR"}, {"uid": "github/CRG-CNAG/anubis", "html_url": "https://rseng.github.io/software/repository/github/CRG-CNAG/anubis", "api_url": "https://rseng.github.io/software/api/repos/github/CRG-CNAG/anubis"}, {"uid": "github/AFD-Illinois/ebhlight", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/ebhlight", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/ebhlight"}, {"uid": "github/AFD-Illinois/iharm3d", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/iharm3d", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/iharm3d"}, {"uid": "github/ajeldorado/falco-matlab", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-matlab"}, {"uid": "github/ajeldorado/falco-python", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-python", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-python"}, {"uid": "github/0x0f0f0f/Metatheory.jl", "html_url": "https://rseng.github.io/software/repository/github/0x0f0f0f/Metatheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/0x0f0f0f/Metatheory.jl"}, {"uid": "github/fraserw/TRIPPy", "html_url": "https://rseng.github.io/software/repository/github/fraserw/TRIPPy", "api_url": "https://rseng.github.io/software/api/repos/github/fraserw/TRIPPy"}, {"uid": "github/cloudflex-project/cloudflex", "html_url": "https://rseng.github.io/software/repository/github/cloudflex-project/cloudflex", "api_url": "https://rseng.github.io/software/api/repos/github/cloudflex-project/cloudflex"}, {"uid": "github/mindearth/mobilkit", "html_url": "https://rseng.github.io/software/repository/github/mindearth/mobilkit", "api_url": "https://rseng.github.io/software/api/repos/github/mindearth/mobilkit"}, {"uid": "github/decargroup/pykoop", "html_url": "https://rseng.github.io/software/repository/github/decargroup/pykoop", "api_url": "https://rseng.github.io/software/api/repos/github/decargroup/pykoop"}, {"uid": "github/linsalrob/PhiSpy", "html_url": "https://rseng.github.io/software/repository/github/linsalrob/PhiSpy", "api_url": "https://rseng.github.io/software/api/repos/github/linsalrob/PhiSpy"}, {"uid": "github/hippylib/soupy", "html_url": "https://rseng.github.io/software/repository/github/hippylib/soupy", "api_url": "https://rseng.github.io/software/api/repos/github/hippylib/soupy"}, {"uid": "github/multiply-org/sar-pre-processing", "html_url": "https://rseng.github.io/software/repository/github/multiply-org/sar-pre-processing", "api_url": "https://rseng.github.io/software/api/repos/github/multiply-org/sar-pre-processing"}, {"uid": "github/paulsengroup/hictk", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictk", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictk"}, {"uid": "github/paulsengroup/hictkpy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkpy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkpy"}, {"uid": "github/paulsengroup/StripePy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/StripePy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/StripePy"}, {"uid": "github/paulsengroup/hictkR", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkR", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkR"}, {"uid": "github/JuliaLang/julia", "html_url": "https://rseng.github.io/software/repository/github/JuliaLang/julia", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaLang/julia"}, {"uid": "github/seqan/lara", "html_url": "https://rseng.github.io/software/repository/github/seqan/lara", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lara"}, {"uid": "github/seqan/lambda", "html_url": "https://rseng.github.io/software/repository/github/seqan/lambda", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lambda"}, {"uid": "github/seqan/flexbar", "html_url": "https://rseng.github.io/software/repository/github/seqan/flexbar", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/flexbar"}, {"uid": "github/parthenon-hpc-lab/parthenon", "html_url": "https://rseng.github.io/software/repository/github/parthenon-hpc-lab/parthenon", "api_url": "https://rseng.github.io/software/api/repos/github/parthenon-hpc-lab/parthenon"}, {"uid": "github/jeertmans/DiffeRT2d", "html_url": "https://rseng.github.io/software/repository/github/jeertmans/DiffeRT2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeertmans/DiffeRT2d"}, {"uid": "github/kritiyer/AngioNet", "html_url": "https://rseng.github.io/software/repository/github/kritiyer/AngioNet", "api_url": "https://rseng.github.io/software/api/repos/github/kritiyer/AngioNet"}, {"uid": "github/chocoteam/pychoco", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/pychoco", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/pychoco"}, {"uid": "github/chocoteam/choco-solver", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/choco-solver", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/choco-solver"}, {"uid": "github/python-hydro/pyro2", "html_url": "https://rseng.github.io/software/repository/github/python-hydro/pyro2", "api_url": "https://rseng.github.io/software/api/repos/github/python-hydro/pyro2"}, {"uid": "github/NSAPH-Software/CRE", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/CRE", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/CRE"}, {"uid": "github/NSAPH-Software/GPCERF", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/GPCERF", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/GPCERF"}, {"uid": "github/optuna/optuna", "html_url": "https://rseng.github.io/software/repository/github/optuna/optuna", "api_url": "https://rseng.github.io/software/api/repos/github/optuna/optuna"}, {"uid": "github/tcollett/LensPop", "html_url": "https://rseng.github.io/software/repository/github/tcollett/LensPop", "api_url": "https://rseng.github.io/software/api/repos/github/tcollett/LensPop"}, {"uid": "github/benlansdell/ethome", "html_url": "https://rseng.github.io/software/repository/github/benlansdell/ethome", "api_url": "https://rseng.github.io/software/api/repos/github/benlansdell/ethome"}, {"uid": "github/beagle-dev/beagle-lib", "html_url": "https://rseng.github.io/software/repository/github/beagle-dev/beagle-lib", "api_url": "https://rseng.github.io/software/api/repos/github/beagle-dev/beagle-lib"}, {"uid": "github/astro-datalab/noaosourcecatalog", "html_url": "https://rseng.github.io/software/repository/github/astro-datalab/noaosourcecatalog", "api_url": "https://rseng.github.io/software/api/repos/github/astro-datalab/noaosourcecatalog"}, {"uid": "github/ChenfuShi/HiChIP_peaks", "html_url": "https://rseng.github.io/software/repository/github/ChenfuShi/HiChIP_peaks", "api_url": "https://rseng.github.io/software/api/repos/github/ChenfuShi/HiChIP_peaks"}, {"uid": "github/Gaiana/nirdust", "html_url": "https://rseng.github.io/software/repository/github/Gaiana/nirdust", "api_url": "https://rseng.github.io/software/api/repos/github/Gaiana/nirdust"}, {"uid": "github/duetosymmetry/qnm", "html_url": "https://rseng.github.io/software/repository/github/duetosymmetry/qnm", "api_url": "https://rseng.github.io/software/api/repos/github/duetosymmetry/qnm"}, {"uid": "github/aiproteomics/aiproteomics", "html_url": "https://rseng.github.io/software/repository/github/aiproteomics/aiproteomics", "api_url": "https://rseng.github.io/software/api/repos/github/aiproteomics/aiproteomics"}, {"uid": "github/Hoeijmakers/tayph", "html_url": "https://rseng.github.io/software/repository/github/Hoeijmakers/tayph", "api_url": "https://rseng.github.io/software/api/repos/github/Hoeijmakers/tayph"}, {"uid": "github/agordon/fastx_toolkit", "html_url": "https://rseng.github.io/software/repository/github/agordon/fastx_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/agordon/fastx_toolkit"}, {"uid": "github/mamartinod/grip-nulling", "html_url": "https://rseng.github.io/software/repository/github/mamartinod/grip-nulling", "api_url": "https://rseng.github.io/software/api/repos/github/mamartinod/grip-nulling"}, {"uid": "github/tnakazato/priism", "html_url": "https://rseng.github.io/software/repository/github/tnakazato/priism", "api_url": "https://rseng.github.io/software/api/repos/github/tnakazato/priism"}, {"uid": "github/benjaminbolling/DynaGUI", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/DynaGUI", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/DynaGUI"}, {"uid": "github/benjaminbolling/RSW", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/RSW", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/RSW"}, {"uid": "github/BrianAronson/birankr", "html_url": "https://rseng.github.io/software/repository/github/BrianAronson/birankr", "api_url": "https://rseng.github.io/software/api/repos/github/BrianAronson/birankr"}, {"uid": "github/nickelnine37/pykronecker", "html_url": "https://rseng.github.io/software/repository/github/nickelnine37/pykronecker", "api_url": "https://rseng.github.io/software/api/repos/github/nickelnine37/pykronecker"}, {"uid": "github/chakrah/sage", "html_url": "https://rseng.github.io/software/repository/github/chakrah/sage", "api_url": "https://rseng.github.io/software/api/repos/github/chakrah/sage"}, {"uid": "github/python-streamz/streamz", "html_url": "https://rseng.github.io/software/repository/github/python-streamz/streamz", "api_url": "https://rseng.github.io/software/api/repos/github/python-streamz/streamz"}, {"uid": "github/CadenArmstrong/simuTrans", "html_url": "https://rseng.github.io/software/repository/github/CadenArmstrong/simuTrans", "api_url": "https://rseng.github.io/software/api/repos/github/CadenArmstrong/simuTrans"}, {"uid": "github/newcleo-dev-team/lbh15", "html_url": "https://rseng.github.io/software/repository/github/newcleo-dev-team/lbh15", "api_url": "https://rseng.github.io/software/api/repos/github/newcleo-dev-team/lbh15"}, {"uid": "github/GaetanBenoitDev/metaMDBG", "html_url": "https://rseng.github.io/software/repository/github/GaetanBenoitDev/metaMDBG", "api_url": "https://rseng.github.io/software/api/repos/github/GaetanBenoitDev/metaMDBG"}, {"uid": "github/Jurgenvilla/moons-sim", "html_url": "https://rseng.github.io/software/repository/github/Jurgenvilla/moons-sim", "api_url": "https://rseng.github.io/software/api/repos/github/Jurgenvilla/moons-sim"}, {"uid": "github/wpb-astro/MCSED", "html_url": "https://rseng.github.io/software/repository/github/wpb-astro/MCSED", "api_url": "https://rseng.github.io/software/api/repos/github/wpb-astro/MCSED"}, {"uid": "github/SimonPfeifer/cows", "html_url": "https://rseng.github.io/software/repository/github/SimonPfeifer/cows", "api_url": "https://rseng.github.io/software/api/repos/github/SimonPfeifer/cows"}, {"uid": "github/pennucci/PulsePortraiture", "html_url": "https://rseng.github.io/software/repository/github/pennucci/PulsePortraiture", "api_url": "https://rseng.github.io/software/api/repos/github/pennucci/PulsePortraiture"}, {"uid": "github/minkailin/stratsi", "html_url": "https://rseng.github.io/software/repository/github/minkailin/stratsi", "api_url": "https://rseng.github.io/software/api/repos/github/minkailin/stratsi"}, {"uid": "github/dealii/dealii", "html_url": "https://rseng.github.io/software/repository/github/dealii/dealii", "api_url": "https://rseng.github.io/software/api/repos/github/dealii/dealii"}, {"uid": "github/3D-e-Chem/kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/kripodb"}, {"uid": "github/3D-e-Chem/knime-sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sygma"}, {"uid": "github/3D-e-Chem/knime-testflow", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-testflow", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-testflow"}, {"uid": "github/3D-e-Chem/3D-e-Chem-VM", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/3D-e-Chem-VM", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/3D-e-Chem-VM"}, {"uid": "github/3D-e-Chem/knime-python-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-node-archetype"}, {"uid": "github/3D-e-Chem/knime-silicos-it", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-silicos-it", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-silicos-it"}, {"uid": "github/3D-e-Chem/knime-sstea", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sstea", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sstea"}, {"uid": "github/3D-e-Chem/knime-kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-kripodb"}, {"uid": "github/3D-e-Chem/tycho-knime-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/tycho-knime-node-archetype"}, {"uid": "github/3D-e-Chem/sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/sygma"}, {"uid": "github/3D-e-Chem/knime-gpcrdb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-gpcrdb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-gpcrdb"}, {"uid": "github/3D-e-Chem/knime-molviewer", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-molviewer", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-molviewer"}, {"uid": "github/3D-e-Chem/knime-pharmacophore", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-pharmacophore", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-pharmacophore"}, {"uid": "github/3D-e-Chem/knime-klifs", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-klifs", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-klifs"}, {"uid": "github/3D-e-Chem/knime-plants", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-plants", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-plants"}, {"uid": "github/3D-e-Chem/knime-python-wrapper", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-wrapper"}, {"uid": "github/apcamargo/prodigal-gv", "html_url": "https://rseng.github.io/software/repository/github/apcamargo/prodigal-gv", "api_url": "https://rseng.github.io/software/api/repos/github/apcamargo/prodigal-gv"}, {"uid": "github/radiocosmology/driftscan", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/driftscan", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/driftscan"}, {"uid": "github/radiocosmology/caput", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/caput", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/caput"}, {"uid": "github/radiocosmology/draco", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/draco", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/draco"}, {"uid": "github/avapolzin/spike", "html_url": "https://rseng.github.io/software/repository/github/avapolzin/spike", "api_url": "https://rseng.github.io/software/api/repos/github/avapolzin/spike"}, {"uid": "github/theonefromnowhere/FitCov", "html_url": "https://rseng.github.io/software/repository/github/theonefromnowhere/FitCov", "api_url": "https://rseng.github.io/software/api/repos/github/theonefromnowhere/FitCov"}, {"uid": "github/cconroy20/alf", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/alf", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/alf"}, {"uid": "github/cconroy20/fsps", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/fsps", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/fsps"}, {"uid": "github/openvax/pyensembl", "html_url": "https://rseng.github.io/software/repository/github/openvax/pyensembl", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/pyensembl"}, {"uid": "github/openvax/mhcflurry", "html_url": "https://rseng.github.io/software/repository/github/openvax/mhcflurry", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/mhcflurry"}, {"uid": "github/dcorre/otrain", "html_url": "https://rseng.github.io/software/repository/github/dcorre/otrain", "api_url": "https://rseng.github.io/software/api/repos/github/dcorre/otrain"}, {"uid": "github/agshumate/LiftoffTools", "html_url": "https://rseng.github.io/software/repository/github/agshumate/LiftoffTools", "api_url": "https://rseng.github.io/software/api/repos/github/agshumate/LiftoffTools"}, {"uid": "github/fairtracks/omnipy_examples", "html_url": "https://rseng.github.io/software/repository/github/fairtracks/omnipy_examples", "api_url": "https://rseng.github.io/software/api/repos/github/fairtracks/omnipy_examples"}, {"uid": "github/pavanvidem/chira", "html_url": "https://rseng.github.io/software/repository/github/pavanvidem/chira", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvidem/chira"}, {"uid": "github/mc-imperial/gpuverify", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/gpuverify", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/gpuverify"}, {"uid": "github/mc-imperial/jfs", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/jfs", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/jfs"}, {"uid": "github/mc-imperial/multicore-test-harness", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/multicore-test-harness", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/multicore-test-harness"}, {"uid": "github/leprojetcastor/castor", "html_url": "https://rseng.github.io/software/repository/github/leprojetcastor/castor", "api_url": "https://rseng.github.io/software/api/repos/github/leprojetcastor/castor"}, {"uid": "github/yfperezg/frisbhee", "html_url": "https://rseng.github.io/software/repository/github/yfperezg/frisbhee", "api_url": "https://rseng.github.io/software/api/repos/github/yfperezg/frisbhee"}, {"uid": "github/spedas/pyspedas", "html_url": "https://rseng.github.io/software/repository/github/spedas/pyspedas", "api_url": "https://rseng.github.io/software/api/repos/github/spedas/pyspedas"}, {"uid": "github/Libsharp/libsharp", "html_url": "https://rseng.github.io/software/repository/github/Libsharp/libsharp", "api_url": "https://rseng.github.io/software/api/repos/github/Libsharp/libsharp"}, {"uid": "github/vincentlab/PyFR", "html_url": "https://rseng.github.io/software/repository/github/vincentlab/PyFR", "api_url": "https://rseng.github.io/software/api/repos/github/vincentlab/PyFR"}, {"uid": "github/nuclear-multimessenger-astronomy/nmma", "html_url": "https://rseng.github.io/software/repository/github/nuclear-multimessenger-astronomy/nmma", "api_url": "https://rseng.github.io/software/api/repos/github/nuclear-multimessenger-astronomy/nmma"}, {"uid": "github/nboley/idr", "html_url": "https://rseng.github.io/software/repository/github/nboley/idr", "api_url": "https://rseng.github.io/software/api/repos/github/nboley/idr"}, {"uid": "github/grzeimann/Diagnose", "html_url": "https://rseng.github.io/software/repository/github/grzeimann/Diagnose", "api_url": "https://rseng.github.io/software/api/repos/github/grzeimann/Diagnose"}, {"uid": "github/FRED-2/OptiType", "html_url": "https://rseng.github.io/software/repository/github/FRED-2/OptiType", "api_url": "https://rseng.github.io/software/api/repos/github/FRED-2/OptiType"}, {"uid": "github/bhorowitz/HyPhy-public", "html_url": "https://rseng.github.io/software/repository/github/bhorowitz/HyPhy-public", "api_url": "https://rseng.github.io/software/api/repos/github/bhorowitz/HyPhy-public"}, {"uid": "github/somefunAgba/NLSIG-COVID19Lab", "html_url": "https://rseng.github.io/software/repository/github/somefunAgba/NLSIG-COVID19Lab", "api_url": "https://rseng.github.io/software/api/repos/github/somefunAgba/NLSIG-COVID19Lab"}, {"uid": "github/xstarkit/mpi_xstar", "html_url": "https://rseng.github.io/software/repository/github/xstarkit/mpi_xstar", "api_url": "https://rseng.github.io/software/api/repos/github/xstarkit/mpi_xstar"}, {"uid": "github/BradhamLab/icat", "html_url": "https://rseng.github.io/software/repository/github/BradhamLab/icat", "api_url": "https://rseng.github.io/software/api/repos/github/BradhamLab/icat"}, {"uid": "github/sciapp/sampledb", "html_url": "https://rseng.github.io/software/repository/github/sciapp/sampledb", "api_url": "https://rseng.github.io/software/api/repos/github/sciapp/sampledb"}, {"uid": "github/TearsWaiting/MIMML", "html_url": "https://rseng.github.io/software/repository/github/TearsWaiting/MIMML", "api_url": "https://rseng.github.io/software/api/repos/github/TearsWaiting/MIMML"}, {"uid": "github/jaschers/damspi", "html_url": "https://rseng.github.io/software/repository/github/jaschers/damspi", "api_url": "https://rseng.github.io/software/api/repos/github/jaschers/damspi"}, {"uid": "github/oscaribv/pyaneti", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/pyaneti", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/pyaneti"}, {"uid": "github/oscaribv/exotrending", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/exotrending", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/exotrending"}, {"uid": "github/oscaribv/citlalicue", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/citlalicue", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/citlalicue"}, {"uid": "github/dutilh/CAT", "html_url": "https://rseng.github.io/software/repository/github/dutilh/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/dutilh/CAT"}, {"uid": "github/ruggiero/clustep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/clustep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/clustep"}, {"uid": "github/ruggiero/galstep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/galstep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/galstep"}, {"uid": "github/AnthonyOfSeattle/pyAscoreValidation", "html_url": "https://rseng.github.io/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", "api_url": "https://rseng.github.io/software/api/repos/github/AnthonyOfSeattle/pyAscoreValidation"}, {"uid": "github/ryanvarley/exodata", "html_url": "https://rseng.github.io/software/repository/github/ryanvarley/exodata", "api_url": "https://rseng.github.io/software/api/repos/github/ryanvarley/exodata"}, {"uid": "github/bmvdgeijn/WASP", "html_url": "https://rseng.github.io/software/repository/github/bmvdgeijn/WASP", "api_url": "https://rseng.github.io/software/api/repos/github/bmvdgeijn/WASP"}, {"uid": "github/milnus/Corekaburra", "html_url": "https://rseng.github.io/software/repository/github/milnus/Corekaburra", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Corekaburra"}, {"uid": "github/milnus/Magphi", "html_url": "https://rseng.github.io/software/repository/github/milnus/Magphi", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Magphi"}, {"uid": "github/thomaspinder/GPJax", "html_url": "https://rseng.github.io/software/repository/github/thomaspinder/GPJax", "api_url": "https://rseng.github.io/software/api/repos/github/thomaspinder/GPJax"}, {"uid": "github/AdmiralenOla/Scoary", "html_url": "https://rseng.github.io/software/repository/github/AdmiralenOla/Scoary", "api_url": "https://rseng.github.io/software/api/repos/github/AdmiralenOla/Scoary"}, {"uid": "github/metagenopolis/CroCoDeEL", "html_url": "https://rseng.github.io/software/repository/github/metagenopolis/CroCoDeEL", "api_url": "https://rseng.github.io/software/api/repos/github/metagenopolis/CroCoDeEL"}, {"uid": "github/konfound-project/konfound", "html_url": "https://rseng.github.io/software/repository/github/konfound-project/konfound", "api_url": "https://rseng.github.io/software/api/repos/github/konfound-project/konfound"}, {"uid": "github/pepamengual/UEP", "html_url": "https://rseng.github.io/software/repository/github/pepamengual/UEP", "api_url": "https://rseng.github.io/software/api/repos/github/pepamengual/UEP"}, {"uid": "github/jupyter/notebook", "html_url": "https://rseng.github.io/software/repository/github/jupyter/notebook", "api_url": "https://rseng.github.io/software/api/repos/github/jupyter/notebook"}, {"uid": "github/bbuchfink/diamond", "html_url": "https://rseng.github.io/software/repository/github/bbuchfink/diamond", "api_url": "https://rseng.github.io/software/api/repos/github/bbuchfink/diamond"}, {"uid": "github/TabeaSonnenschein/CellAutDisp", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/CellAutDisp", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/CellAutDisp"}, {"uid": "github/TabeaSonnenschein/UrbHealth-ABM", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/UrbHealth-ABM"}, {"uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions"}, {"uid": "github/TabeaSonnenschein/GenSynthPop", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/GenSynthPop", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/GenSynthPop"}, {"uid": "github/cobilab/RFSC", "html_url": "https://rseng.github.io/software/repository/github/cobilab/RFSC", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/RFSC"}, {"uid": "github/cobilab/OptimJV3", "html_url": "https://rseng.github.io/software/repository/github/cobilab/OptimJV3", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/OptimJV3"}, {"uid": "github/cobilab/altair", "html_url": "https://rseng.github.io/software/repository/github/cobilab/altair", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/altair"}, {"uid": "github/purmortal/galcraft", "html_url": "https://rseng.github.io/software/repository/github/purmortal/galcraft", "api_url": "https://rseng.github.io/software/api/repos/github/purmortal/galcraft"}, {"uid": "github/ebellm/pyraf-dbsp", "html_url": "https://rseng.github.io/software/repository/github/ebellm/pyraf-dbsp", "api_url": "https://rseng.github.io/software/api/repos/github/ebellm/pyraf-dbsp"}, {"uid": "github/pierrepo/autoclassweb", "html_url": "https://rseng.github.io/software/repository/github/pierrepo/autoclassweb", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepo/autoclassweb"}, {"uid": "github/guillochon/MOSFiT", "html_url": "https://rseng.github.io/software/repository/github/guillochon/MOSFiT", "api_url": "https://rseng.github.io/software/api/repos/github/guillochon/MOSFiT"}, {"uid": "github/DamynChipman/EllipticForest", "html_url": "https://rseng.github.io/software/repository/github/DamynChipman/EllipticForest", "api_url": "https://rseng.github.io/software/api/repos/github/DamynChipman/EllipticForest"}, {"uid": "github/DEIB-GECO/CRIS_single-sample", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CRIS_single-sample", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CRIS_single-sample"}, {"uid": "github/DEIB-GECO/VarSum", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/VarSum", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/VarSum"}, {"uid": "github/DEIB-GECO/OpenGDC", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/OpenGDC", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/OpenGDC"}, {"uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/BC_Intrinsic_subtyping"}, {"uid": "github/DEIB-GECO/CombSAFE", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CombSAFE", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CombSAFE"}, {"uid": "github/DEIB-GECO/flu-warning-system", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/flu-warning-system", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/flu-warning-system"}, {"uid": "github/DEIB-GECO/GeneNetFusion", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/GeneNetFusion", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/GeneNetFusion"}, {"uid": "github/DEIB-GECO/MutViz", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/MutViz", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/MutViz"}, {"uid": "github/DEIB-GECO/ReRa", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/ReRa", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/ReRa"}, {"uid": "github/DEIB-GECO/genereg", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/genereg", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/genereg"}, {"uid": "github/jbattat/pep_core", "html_url": "https://rseng.github.io/software/repository/github/jbattat/pep_core", "api_url": "https://rseng.github.io/software/api/repos/github/jbattat/pep_core"}, {"uid": "github/mgieles/limepy", "html_url": "https://rseng.github.io/software/repository/github/mgieles/limepy", "api_url": "https://rseng.github.io/software/api/repos/github/mgieles/limepy"}, {"uid": "github/KeplerGO/PyKE", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/PyKE", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/PyKE"}, {"uid": "github/KeplerGO/K2fov", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/K2fov", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/K2fov"}, {"uid": "github/KeplerGO/kadenza", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/kadenza", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/kadenza"}, {"uid": "github/KeplerGO/k2mosaic", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/k2mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/k2mosaic"}, {"uid": "github/OpenMDAO/dymos", "html_url": "https://rseng.github.io/software/repository/github/OpenMDAO/dymos", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMDAO/dymos"}, {"uid": "github/ashleefv/ACEInhibPKPD", "html_url": "https://rseng.github.io/software/repository/github/ashleefv/ACEInhibPKPD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleefv/ACEInhibPKPD"}, {"uid": "github/MCTwo/MCMAC", "html_url": "https://rseng.github.io/software/repository/github/MCTwo/MCMAC", "api_url": "https://rseng.github.io/software/api/repos/github/MCTwo/MCMAC"}, {"uid": "github/danStich/dia", "html_url": "https://rseng.github.io/software/repository/github/danStich/dia", "api_url": "https://rseng.github.io/software/api/repos/github/danStich/dia"}, {"uid": "github/csmsoftware/IMPaCTS", "html_url": "https://rseng.github.io/software/repository/github/csmsoftware/IMPaCTS", "api_url": "https://rseng.github.io/software/api/repos/github/csmsoftware/IMPaCTS"}, {"uid": "github/EIT-ALIVE/eitprocessing", "html_url": "https://rseng.github.io/software/repository/github/EIT-ALIVE/eitprocessing", "api_url": "https://rseng.github.io/software/api/repos/github/EIT-ALIVE/eitprocessing"}, {"uid": "github/mattwarkentin/openmpp", "html_url": "https://rseng.github.io/software/repository/github/mattwarkentin/openmpp", "api_url": "https://rseng.github.io/software/api/repos/github/mattwarkentin/openmpp"}, {"uid": "github/zhang-zhixiang/spectool", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/spectool", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/spectool"}, {"uid": "github/zhang-zhixiang/stellarSpecModel", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/stellarSpecModel", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/stellarSpecModel"}, {"uid": "github/supernnova/SuperNNova", "html_url": "https://rseng.github.io/software/repository/github/supernnova/SuperNNova", "api_url": "https://rseng.github.io/software/api/repos/github/supernnova/SuperNNova"}, {"uid": "github/DyHealthNet/NApy", "html_url": "https://rseng.github.io/software/repository/github/DyHealthNet/NApy", "api_url": "https://rseng.github.io/software/api/repos/github/DyHealthNet/NApy"}, {"uid": "github/yanliang-astro/aestra", "html_url": "https://rseng.github.io/software/repository/github/yanliang-astro/aestra", "api_url": "https://rseng.github.io/software/api/repos/github/yanliang-astro/aestra"}, {"uid": "github/spacetx/starfish", "html_url": "https://rseng.github.io/software/repository/github/spacetx/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/spacetx/starfish"}, {"uid": "github/atchekho/harmpi", "html_url": "https://rseng.github.io/software/repository/github/atchekho/harmpi", "api_url": "https://rseng.github.io/software/api/repos/github/atchekho/harmpi"}, {"uid": "github/BenMql/coral", "html_url": "https://rseng.github.io/software/repository/github/BenMql/coral", "api_url": "https://rseng.github.io/software/api/repos/github/BenMql/coral"}, {"uid": "github/EnergyModelsX/EnergyModelsBase.jl", "html_url": "https://rseng.github.io/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EnergyModelsX/EnergyModelsBase.jl"}, {"uid": "github/ch-var/SMART", "html_url": "https://rseng.github.io/software/repository/github/ch-var/SMART", "api_url": "https://rseng.github.io/software/api/repos/github/ch-var/SMART"}, {"uid": "github/gianthk/ciclope", "html_url": "https://rseng.github.io/software/repository/github/gianthk/ciclope", "api_url": "https://rseng.github.io/software/api/repos/github/gianthk/ciclope"}, {"uid": "github/MAnalytics/opitools", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/opitools", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/opitools"}, {"uid": "github/MAnalytics/akmedoids", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/akmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/akmedoids"}, {"uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", "html_url": "https://rseng.github.io/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", "api_url": "https://rseng.github.io/software/api/repos/github/BlackHolePerturbationToolkit/KerrGeoPy"}, {"uid": "github/zhongqiu1245/CCS-Net", "html_url": "https://rseng.github.io/software/repository/github/zhongqiu1245/CCS-Net", "api_url": "https://rseng.github.io/software/api/repos/github/zhongqiu1245/CCS-Net"}, {"uid": "github/jwohlwend/boltz", "html_url": "https://rseng.github.io/software/repository/github/jwohlwend/boltz", "api_url": "https://rseng.github.io/software/api/repos/github/jwohlwend/boltz"}, {"uid": "github/kbarbary/sep", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/sep", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/sep"}, {"uid": "github/kbarbary/nestle", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/nestle", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/nestle"}, {"uid": "github/kbarbary/extinction", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/extinction", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/extinction"}, {"uid": "github/dkoboldt/varscan", "html_url": "https://rseng.github.io/software/repository/github/dkoboldt/varscan", "api_url": "https://rseng.github.io/software/api/repos/github/dkoboldt/varscan"}, {"uid": "github/abmantz/lmc", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lmc", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lmc"}, {"uid": "github/abmantz/lrgs", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lrgs", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lrgs"}, {"uid": "github/abmantz/rgw", "html_url": "https://rseng.github.io/software/repository/github/abmantz/rgw", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/rgw"}, {"uid": "github/bregaldo/pywst", "html_url": "https://rseng.github.io/software/repository/github/bregaldo/pywst", "api_url": "https://rseng.github.io/software/api/repos/github/bregaldo/pywst"}, {"uid": "github/astropatel/twinkle", "html_url": "https://rseng.github.io/software/repository/github/astropatel/twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/astropatel/twinkle"}, {"uid": "github/zhangrengang/SubPhaser", "html_url": "https://rseng.github.io/software/repository/github/zhangrengang/SubPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/zhangrengang/SubPhaser"}, {"uid": "github/EdwardBerman/shopt", "html_url": "https://rseng.github.io/software/repository/github/EdwardBerman/shopt", "api_url": "https://rseng.github.io/software/api/repos/github/EdwardBerman/shopt"}, {"uid": "github/kendomaniac/docker4seq", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/docker4seq", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/docker4seq"}, {"uid": "github/kendomaniac/rCASC", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/rCASC", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/rCASC"}, {"uid": "github/prolfqua/prolfquapp", "html_url": "https://rseng.github.io/software/repository/github/prolfqua/prolfquapp", "api_url": "https://rseng.github.io/software/api/repos/github/prolfqua/prolfquapp"}, {"uid": "github/OnroerendErfgoed/atramhasis", "html_url": "https://rseng.github.io/software/repository/github/OnroerendErfgoed/atramhasis", "api_url": "https://rseng.github.io/software/api/repos/github/OnroerendErfgoed/atramhasis"}, {"uid": "github/szwiep/py_SBeLT", "html_url": "https://rseng.github.io/software/repository/github/szwiep/py_SBeLT", "api_url": "https://rseng.github.io/software/api/repos/github/szwiep/py_SBeLT"}, {"uid": "github/rega-cev/virulign", "html_url": "https://rseng.github.io/software/repository/github/rega-cev/virulign", "api_url": "https://rseng.github.io/software/api/repos/github/rega-cev/virulign"}, {"uid": "github/mjcarley/nbi", "html_url": "https://rseng.github.io/software/repository/github/mjcarley/nbi", "api_url": "https://rseng.github.io/software/api/repos/github/mjcarley/nbi"}, {"uid": "github/jan-rybizki/Galaxia_wrap", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Galaxia_wrap", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Galaxia_wrap"}, {"uid": "github/jan-rybizki/Chempy", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Chempy", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Chempy"}, {"uid": "github/jan-rybizki/gdr2_completeness", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/gdr2_completeness", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/gdr2_completeness"}, {"uid": "github/jtschindler/sculptor", "html_url": "https://rseng.github.io/software/repository/github/jtschindler/sculptor", "api_url": "https://rseng.github.io/software/api/repos/github/jtschindler/sculptor"}, {"uid": "github/E3SM-Project/gdess", "html_url": "https://rseng.github.io/software/repository/github/E3SM-Project/gdess", "api_url": "https://rseng.github.io/software/api/repos/github/E3SM-Project/gdess"}, {"uid": "github/Imperial-visualizations/Physics-Visualizations", "html_url": "https://rseng.github.io/software/repository/github/Imperial-visualizations/Physics-Visualizations", "api_url": "https://rseng.github.io/software/api/repos/github/Imperial-visualizations/Physics-Visualizations"}, {"uid": "github/philippbaumeister/ExoMDN", "html_url": "https://rseng.github.io/software/repository/github/philippbaumeister/ExoMDN", "api_url": "https://rseng.github.io/software/api/repos/github/philippbaumeister/ExoMDN"}, {"uid": "github/VasuLab/rgfrosh", "html_url": "https://rseng.github.io/software/repository/github/VasuLab/rgfrosh", "api_url": "https://rseng.github.io/software/api/repos/github/VasuLab/rgfrosh"}, {"uid": "github/CosmoStat/shapepipe", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/shapepipe", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/shapepipe"}, {"uid": "github/CosmoStat/score", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/score", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/score"}, {"uid": "github/CosmoStat/Glimpse", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/Glimpse", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/Glimpse"}, {"uid": "github/CosmoStat/mccd", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/mccd", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/mccd"}, {"uid": "github/pybamm-team/PyBaMM", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/PyBaMM", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/PyBaMM"}, {"uid": "github/pybamm-team/liionpack", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/liionpack", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/liionpack"}, {"uid": "github/LiuJJ0327/CCPE", "html_url": "https://rseng.github.io/software/repository/github/LiuJJ0327/CCPE", "api_url": "https://rseng.github.io/software/api/repos/github/LiuJJ0327/CCPE"}, {"uid": "github/kmsurrao/reMASTERed", "html_url": "https://rseng.github.io/software/repository/github/kmsurrao/reMASTERed", "api_url": "https://rseng.github.io/software/api/repos/github/kmsurrao/reMASTERed"}, {"uid": "github/RoryChenXY/DataRepExp_public", "html_url": "https://rseng.github.io/software/repository/github/RoryChenXY/DataRepExp_public", "api_url": "https://rseng.github.io/software/api/repos/github/RoryChenXY/DataRepExp_public"}, {"uid": "github/dparkins/CosmoNest", "html_url": "https://rseng.github.io/software/repository/github/dparkins/CosmoNest", "api_url": "https://rseng.github.io/software/api/repos/github/dparkins/CosmoNest"}, {"uid": "github/NiallJeffrey/DeepMass", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/DeepMass", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/DeepMass"}, {"uid": "github/NiallJeffrey/BornRaytrace", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/BornRaytrace", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/BornRaytrace"}, {"uid": "github/tomasstolker/ARTES", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/ARTES", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/ARTES"}, {"uid": "github/tomasstolker/species", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/species", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/species"}, {"uid": "github/tomasstolker/pycrires", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/pycrires", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/pycrires"}, {"uid": "github/PapenfussLab/gridss", "html_url": "https://rseng.github.io/software/repository/github/PapenfussLab/gridss", "api_url": "https://rseng.github.io/software/api/repos/github/PapenfussLab/gridss"}, {"uid": "github/PetroFit/petrofit", "html_url": "https://rseng.github.io/software/repository/github/PetroFit/petrofit", "api_url": "https://rseng.github.io/software/api/repos/github/PetroFit/petrofit"}, {"uid": "github/tensorlayer/tensorlayer", "html_url": "https://rseng.github.io/software/repository/github/tensorlayer/tensorlayer", "api_url": "https://rseng.github.io/software/api/repos/github/tensorlayer/tensorlayer"}, {"uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_lGRBs"}, {"uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_sGRBs"}, {"uid": "github/afarahi/tatter", "html_url": "https://rseng.github.io/software/repository/github/afarahi/tatter", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/tatter"}, {"uid": "github/afarahi/PoPE", "html_url": "https://rseng.github.io/software/repository/github/afarahi/PoPE", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/PoPE"}, {"uid": "github/afarahi/kllr", "html_url": "https://rseng.github.io/software/repository/github/afarahi/kllr", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/kllr"}, {"uid": "github/stevengj/nlopt", "html_url": "https://rseng.github.io/software/repository/github/stevengj/nlopt", "api_url": "https://rseng.github.io/software/api/repos/github/stevengj/nlopt"}, {"uid": "github/llrs/experDesign", "html_url": "https://rseng.github.io/software/repository/github/llrs/experDesign", "api_url": "https://rseng.github.io/software/api/repos/github/llrs/experDesign"}, {"uid": "github/nlesc-nano/flamingo", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/flamingo", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/flamingo"}, {"uid": "github/nlesc-nano/insilico-server", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/insilico-server", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/insilico-server"}, {"uid": "github/nlesc-nano/Moka", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/Moka", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/Moka"}, {"uid": "github/nlesc-nano/ceiba-cli", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba-cli", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba-cli"}, {"uid": "github/nlesc-nano/ceiba", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba"}, {"uid": "github/nlesc-nano/swan", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/swan", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/swan"}, {"uid": "github/nlesc-nano/CAT", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/CAT"}, {"uid": "github/SofieVG/FlowSOM", "html_url": "https://rseng.github.io/software/repository/github/SofieVG/FlowSOM", "api_url": "https://rseng.github.io/software/api/repos/github/SofieVG/FlowSOM"}, {"uid": "github/spicy-oil/hfs_fit", "html_url": "https://rseng.github.io/software/repository/github/spicy-oil/hfs_fit", "api_url": "https://rseng.github.io/software/api/repos/github/spicy-oil/hfs_fit"}, {"uid": "github/pw31/GGchem", "html_url": "https://rseng.github.io/software/repository/github/pw31/GGchem", "api_url": "https://rseng.github.io/software/api/repos/github/pw31/GGchem"}, {"uid": "github/megbedell/wobble", "html_url": "https://rseng.github.io/software/repository/github/megbedell/wobble", "api_url": "https://rseng.github.io/software/api/repos/github/megbedell/wobble"}, {"uid": "github/cgre-aachen/gemgis", "html_url": "https://rseng.github.io/software/repository/github/cgre-aachen/gemgis", "api_url": "https://rseng.github.io/software/api/repos/github/cgre-aachen/gemgis"}, {"uid": "github/BackofenLab/IntaRNA", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/IntaRNA", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/IntaRNA"}, {"uid": "github/BackofenLab/StoatyDive", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/StoatyDive", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/StoatyDive"}, {"uid": "github/BackofenLab/Peakhood", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/Peakhood", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/Peakhood"}, {"uid": "github/arjunsavel/SImMER", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/SImMER", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/SImMER"}, {"uid": "github/arjunsavel/cortecs", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/cortecs", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/cortecs"}, {"uid": "github/vidarsko/ComFiT", "html_url": "https://rseng.github.io/software/repository/github/vidarsko/ComFiT", "api_url": "https://rseng.github.io/software/api/repos/github/vidarsko/ComFiT"}, {"uid": "github/ZhangGroup-MITChemistry/OpenNucleome", "html_url": "https://rseng.github.io/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", "api_url": "https://rseng.github.io/software/api/repos/github/ZhangGroup-MITChemistry/OpenNucleome"}, {"uid": "github/EpiVec/TDLM", "html_url": "https://rseng.github.io/software/repository/github/EpiVec/TDLM", "api_url": "https://rseng.github.io/software/api/repos/github/EpiVec/TDLM"}, {"uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/AndreinaCastillo/Genie_manuscript_data_analysis"}, {"uid": "github/einsteinpy/einsteinpy", "html_url": "https://rseng.github.io/software/repository/github/einsteinpy/einsteinpy", "api_url": "https://rseng.github.io/software/api/repos/github/einsteinpy/einsteinpy"}, {"uid": "github/omboersma/deepglow", "html_url": "https://rseng.github.io/software/repository/github/omboersma/deepglow", "api_url": "https://rseng.github.io/software/api/repos/github/omboersma/deepglow"}, {"uid": "github/WatsonGroupTCD/J2suscep", "html_url": "https://rseng.github.io/software/repository/github/WatsonGroupTCD/J2suscep", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonGroupTCD/J2suscep"}, {"uid": "github/rkiman/wdwarfdate", "html_url": "https://rseng.github.io/software/repository/github/rkiman/wdwarfdate", "api_url": "https://rseng.github.io/software/api/repos/github/rkiman/wdwarfdate"}, {"uid": "github/miguelzuma/hi_class_public", "html_url": "https://rseng.github.io/software/repository/github/miguelzuma/hi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/miguelzuma/hi_class_public"}, {"uid": "github/aarondotter/iso", "html_url": "https://rseng.github.io/software/repository/github/aarondotter/iso", "api_url": "https://rseng.github.io/software/api/repos/github/aarondotter/iso"}, {"uid": "github/erikbern/ann-benchmarks", "html_url": "https://rseng.github.io/software/repository/github/erikbern/ann-benchmarks", "api_url": "https://rseng.github.io/software/api/repos/github/erikbern/ann-benchmarks"}, {"uid": "github/pymc-devs/pymc3", "html_url": "https://rseng.github.io/software/repository/github/pymc-devs/pymc3", "api_url": "https://rseng.github.io/software/api/repos/github/pymc-devs/pymc3"}, {"uid": "github/wilsonrljr/sysidentpy", "html_url": "https://rseng.github.io/software/repository/github/wilsonrljr/sysidentpy", "api_url": "https://rseng.github.io/software/api/repos/github/wilsonrljr/sysidentpy"}, {"uid": "github/acil-bwh/bayes_traj", "html_url": "https://rseng.github.io/software/repository/github/acil-bwh/bayes_traj", "api_url": "https://rseng.github.io/software/api/repos/github/acil-bwh/bayes_traj"}, {"uid": "github/JEFworks-Lab/STdeconvolve", "html_url": "https://rseng.github.io/software/repository/github/JEFworks-Lab/STdeconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/JEFworks-Lab/STdeconvolve"}, {"uid": "github/jhparkastro/gpcal", "html_url": "https://rseng.github.io/software/repository/github/jhparkastro/gpcal", "api_url": "https://rseng.github.io/software/api/repos/github/jhparkastro/gpcal"}, {"uid": "github/virgesmith/neworder", "html_url": "https://rseng.github.io/software/repository/github/virgesmith/neworder", "api_url": "https://rseng.github.io/software/api/repos/github/virgesmith/neworder"}, {"uid": "github/fjdu/myRadex", "html_url": "https://rseng.github.io/software/repository/github/fjdu/myRadex", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/myRadex"}, {"uid": "github/fjdu/rac-2d", "html_url": "https://rseng.github.io/software/repository/github/fjdu/rac-2d", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/rac-2d"}, {"uid": "github/DFKI-NI/syclops", "html_url": "https://rseng.github.io/software/repository/github/DFKI-NI/syclops", "api_url": "https://rseng.github.io/software/api/repos/github/DFKI-NI/syclops"}, {"uid": "github/nci/scores", "html_url": "https://rseng.github.io/software/repository/github/nci/scores", "api_url": "https://rseng.github.io/software/api/repos/github/nci/scores"}, {"uid": "github/klho/FLAM", "html_url": "https://rseng.github.io/software/repository/github/klho/FLAM", "api_url": "https://rseng.github.io/software/api/repos/github/klho/FLAM"}, {"uid": "github/nsoranzo/sspace_basic", "html_url": "https://rseng.github.io/software/repository/github/nsoranzo/sspace_basic", "api_url": "https://rseng.github.io/software/api/repos/github/nsoranzo/sspace_basic"}, {"uid": "github/SMI/SmiServices", "html_url": "https://rseng.github.io/software/repository/github/SMI/SmiServices", "api_url": "https://rseng.github.io/software/api/repos/github/SMI/SmiServices"}, {"uid": "github/Ohervet/Bjet_MCMC", "html_url": "https://rseng.github.io/software/repository/github/Ohervet/Bjet_MCMC", "api_url": "https://rseng.github.io/software/api/repos/github/Ohervet/Bjet_MCMC"}, {"uid": "github/labsquare/CutePeaks", "html_url": "https://rseng.github.io/software/repository/github/labsquare/CutePeaks", "api_url": "https://rseng.github.io/software/api/repos/github/labsquare/CutePeaks"}, {"uid": "github/tpospisi/nnkcde", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/nnkcde", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/nnkcde"}, {"uid": "github/tpospisi/cdetools", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/cdetools", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/cdetools"}, {"uid": "github/tpospisi/RFCDE", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/RFCDE", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/RFCDE"}, {"uid": "github/ParaFly/ParaFly", "html_url": "https://rseng.github.io/software/repository/github/ParaFly/ParaFly", "api_url": "https://rseng.github.io/software/api/repos/github/ParaFly/ParaFly"}, {"uid": "github/davtsang/slimplectic", "html_url": "https://rseng.github.io/software/repository/github/davtsang/slimplectic", "api_url": "https://rseng.github.io/software/api/repos/github/davtsang/slimplectic"}, {"uid": "github/PolyChord/PolyChordLite", "html_url": "https://rseng.github.io/software/repository/github/PolyChord/PolyChordLite", "api_url": "https://rseng.github.io/software/api/repos/github/PolyChord/PolyChordLite"}, {"uid": "github/mgckind/SparsePz", "html_url": "https://rseng.github.io/software/repository/github/mgckind/SparsePz", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/SparsePz"}, {"uid": "github/mgckind/easyaccess", "html_url": "https://rseng.github.io/software/repository/github/mgckind/easyaccess", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/easyaccess"}, {"uid": "github/exoclime/THOR", "html_url": "https://rseng.github.io/software/repository/github/exoclime/THOR", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/THOR"}, {"uid": "github/exoclime/VULCAN", "html_url": "https://rseng.github.io/software/repository/github/exoclime/VULCAN", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/VULCAN"}, {"uid": "github/exoclime/HELA", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELA", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELA"}, {"uid": "github/exoclime/HELIOS", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS"}, {"uid": "github/exoclime/HELIOS-K", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS-K", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS-K"}, {"uid": "github/exoclime/Helios-r2", "html_url": "https://rseng.github.io/software/repository/github/exoclime/Helios-r2", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/Helios-r2"}, {"uid": "github/exoclime/FastChem", "html_url": "https://rseng.github.io/software/repository/github/exoclime/FastChem", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/FastChem"}, {"uid": "github/Zafiirah13/meercrab", "html_url": "https://rseng.github.io/software/repository/github/Zafiirah13/meercrab", "api_url": "https://rseng.github.io/software/api/repos/github/Zafiirah13/meercrab"}, {"uid": "github/Huracan-project/huracanpy", "html_url": "https://rseng.github.io/software/repository/github/Huracan-project/huracanpy", "api_url": "https://rseng.github.io/software/api/repos/github/Huracan-project/huracanpy"}, {"uid": "github/AutoResearch/sweetbean", "html_url": "https://rseng.github.io/software/repository/github/AutoResearch/sweetbean", "api_url": "https://rseng.github.io/software/api/repos/github/AutoResearch/sweetbean"}, {"uid": "github/kristiantcho/flashcurve", "html_url": "https://rseng.github.io/software/repository/github/kristiantcho/flashcurve", "api_url": "https://rseng.github.io/software/api/repos/github/kristiantcho/flashcurve"}, {"uid": "github/Singh-Lab/uKIN", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/uKIN", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/uKIN"}, {"uid": "github/Singh-Lab/DeMaSk", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/DeMaSk", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/DeMaSk"}, {"uid": "github/liuhong-jia/scAnno", "html_url": "https://rseng.github.io/software/repository/github/liuhong-jia/scAnno", "api_url": "https://rseng.github.io/software/api/repos/github/liuhong-jia/scAnno"}, {"uid": "github/EpistasisLab/regens", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/regens", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/regens"}, {"uid": "github/EpistasisLab/tpot", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/tpot", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/tpot"}, {"uid": "github/mind-inria/mri-nufft", "html_url": "https://rseng.github.io/software/repository/github/mind-inria/mri-nufft", "api_url": "https://rseng.github.io/software/api/repos/github/mind-inria/mri-nufft"}, {"uid": "github/gotsunami/Youpi", "html_url": "https://rseng.github.io/software/repository/github/gotsunami/Youpi", "api_url": "https://rseng.github.io/software/api/repos/github/gotsunami/Youpi"}, {"uid": "github/shikhar249/OnionMHC", "html_url": "https://rseng.github.io/software/repository/github/shikhar249/OnionMHC", "api_url": "https://rseng.github.io/software/api/repos/github/shikhar249/OnionMHC"}, {"uid": "github/IBM/topography-searcher", "html_url": "https://rseng.github.io/software/repository/github/IBM/topography-searcher", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/topography-searcher"}, {"uid": "github/IBM/fold2seq", "html_url": "https://rseng.github.io/software/repository/github/IBM/fold2seq", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/fold2seq"}, {"uid": "github/RuthAngus/SIPK2", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/SIPK2", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/SIPK2"}, {"uid": "github/RuthAngus/stardate", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/stardate", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/stardate"}, {"uid": "github/RuthAngus/gprotation", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/gprotation", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/gprotation"}, {"uid": "github/AbeelLab/lorikeet", "html_url": "https://rseng.github.io/software/repository/github/AbeelLab/lorikeet", "api_url": "https://rseng.github.io/software/api/repos/github/AbeelLab/lorikeet"}, {"uid": "github/Extraweich/homopy", "html_url": "https://rseng.github.io/software/repository/github/Extraweich/homopy", "api_url": "https://rseng.github.io/software/api/repos/github/Extraweich/homopy"}, {"uid": "github/SotaYoshida/NuclearToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/SotaYoshida/NuclearToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SotaYoshida/NuclearToolkit.jl"}, {"uid": "github/sbraden/circle-craters", "html_url": "https://rseng.github.io/software/repository/github/sbraden/circle-craters", "api_url": "https://rseng.github.io/software/api/repos/github/sbraden/circle-craters"}, {"uid": "github/glotzerlab/hoomd-blue", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/hoomd-blue", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/hoomd-blue"}, {"uid": "github/glotzerlab/coxeter", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/coxeter", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/coxeter"}, {"uid": "github/glotzerlab/freud", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/freud", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/freud"}, {"uid": "github/plumed/plumed2", "html_url": "https://rseng.github.io/software/repository/github/plumed/plumed2", "api_url": "https://rseng.github.io/software/api/repos/github/plumed/plumed2"}, {"uid": "github/lengoctram/DustPOL-py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL-py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL-py"}, {"uid": "github/lengoctram/DustPOL_py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL_py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL_py"}, {"uid": "github/parklab/LiRA", "html_url": "https://rseng.github.io/software/repository/github/parklab/LiRA", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/LiRA"}, {"uid": "github/parklab/SCAN2", "html_url": "https://rseng.github.io/software/repository/github/parklab/SCAN2", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/SCAN2"}, {"uid": "github/an0wen/MARDIGRAS", "html_url": "https://rseng.github.io/software/repository/github/an0wen/MARDIGRAS", "api_url": "https://rseng.github.io/software/api/repos/github/an0wen/MARDIGRAS"}, {"uid": "github/bbbbbbzhou/MDPET", "html_url": "https://rseng.github.io/software/repository/github/bbbbbbzhou/MDPET", "api_url": "https://rseng.github.io/software/api/repos/github/bbbbbbzhou/MDPET"}, {"uid": "github/sensein/etelemetry-client", "html_url": "https://rseng.github.io/software/repository/github/sensein/etelemetry-client", "api_url": "https://rseng.github.io/software/api/repos/github/sensein/etelemetry-client"}, {"uid": "github/bpp/bpp", "html_url": "https://rseng.github.io/software/repository/github/bpp/bpp", "api_url": "https://rseng.github.io/software/api/repos/github/bpp/bpp"}, {"uid": "github/CATG-Github/panscan", "html_url": "https://rseng.github.io/software/repository/github/CATG-Github/panscan", "api_url": "https://rseng.github.io/software/api/repos/github/CATG-Github/panscan"}, {"uid": "github/goharbor/harbor", "html_url": "https://rseng.github.io/software/repository/github/goharbor/harbor", "api_url": "https://rseng.github.io/software/api/repos/github/goharbor/harbor"}, {"uid": "github/luntergroup/octopus", "html_url": "https://rseng.github.io/software/repository/github/luntergroup/octopus", "api_url": "https://rseng.github.io/software/api/repos/github/luntergroup/octopus"}, {"uid": "github/dynamics-of-stellar-systems/dynamite_release", "html_url": "https://rseng.github.io/software/repository/github/dynamics-of-stellar-systems/dynamite_release", "api_url": "https://rseng.github.io/software/api/repos/github/dynamics-of-stellar-systems/dynamite_release"}, {"uid": "github/pmkruyen/dearscholar", "html_url": "https://rseng.github.io/software/repository/github/pmkruyen/dearscholar", "api_url": "https://rseng.github.io/software/api/repos/github/pmkruyen/dearscholar"}, {"uid": "github/CajoterBraak/demc2", "html_url": "https://rseng.github.io/software/repository/github/CajoterBraak/demc2", "api_url": "https://rseng.github.io/software/api/repos/github/CajoterBraak/demc2"}, {"uid": "github/MikeSWang/Harmonia", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Harmonia", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Harmonia"}, {"uid": "github/MikeSWang/Triumvirate", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Triumvirate", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Triumvirate"}, {"uid": "github/MikeSWang/HorizonGRound", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/HorizonGRound", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/HorizonGRound"}, {"uid": "github/mishioo/tesliper", "html_url": "https://rseng.github.io/software/repository/github/mishioo/tesliper", "api_url": "https://rseng.github.io/software/api/repos/github/mishioo/tesliper"}, {"uid": "github/sidiwang/snSMART", "html_url": "https://rseng.github.io/software/repository/github/sidiwang/snSMART", "api_url": "https://rseng.github.io/software/api/repos/github/sidiwang/snSMART"}, {"uid": "github/Siegel-Lab/BioSmoother", "html_url": "https://rseng.github.io/software/repository/github/Siegel-Lab/BioSmoother", "api_url": "https://rseng.github.io/software/api/repos/github/Siegel-Lab/BioSmoother"}, {"uid": "github/csb5/lofreq", "html_url": "https://rseng.github.io/software/repository/github/csb5/lofreq", "api_url": "https://rseng.github.io/software/api/repos/github/csb5/lofreq"}, {"uid": "github/ipython/ipython", "html_url": "https://rseng.github.io/software/repository/github/ipython/ipython", "api_url": "https://rseng.github.io/software/api/repos/github/ipython/ipython"}, {"uid": "github/SESMG/SESMG", "html_url": "https://rseng.github.io/software/repository/github/SESMG/SESMG", "api_url": "https://rseng.github.io/software/api/repos/github/SESMG/SESMG"}, {"uid": "github/ChrisBeaumont/brut", "html_url": "https://rseng.github.io/software/repository/github/ChrisBeaumont/brut", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBeaumont/brut"}, {"uid": "github/nipy/heudiconv", "html_url": "https://rseng.github.io/software/repository/github/nipy/heudiconv", "api_url": "https://rseng.github.io/software/api/repos/github/nipy/heudiconv"}, {"uid": "github/LindleyLentati/TempoNest", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/TempoNest", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/TempoNest"}, {"uid": "github/LindleyLentati/Cobra", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/Cobra", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/Cobra"}, {"uid": "github/aabdurrouf/piXedfit", "html_url": "https://rseng.github.io/software/repository/github/aabdurrouf/piXedfit", "api_url": "https://rseng.github.io/software/api/repos/github/aabdurrouf/piXedfit"}, {"uid": "github/NarlikarLab/exoDIVERSITY", "html_url": "https://rseng.github.io/software/repository/github/NarlikarLab/exoDIVERSITY", "api_url": "https://rseng.github.io/software/api/repos/github/NarlikarLab/exoDIVERSITY"}, {"uid": "github/jcorbino/mole", "html_url": "https://rseng.github.io/software/repository/github/jcorbino/mole", "api_url": "https://rseng.github.io/software/api/repos/github/jcorbino/mole"}, {"uid": "github/fkoehlin/montepython_2cosmos_public", "html_url": "https://rseng.github.io/software/repository/github/fkoehlin/montepython_2cosmos_public", "api_url": "https://rseng.github.io/software/api/repos/github/fkoehlin/montepython_2cosmos_public"}, {"uid": "github/aroffringa/aartfaac2ms", "html_url": "https://rseng.github.io/software/repository/github/aroffringa/aartfaac2ms", "api_url": "https://rseng.github.io/software/api/repos/github/aroffringa/aartfaac2ms"}, {"uid": "github/vishwas1984/LaplaceInterpolation.jl", "html_url": "https://rseng.github.io/software/repository/github/vishwas1984/LaplaceInterpolation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vishwas1984/LaplaceInterpolation.jl"}, {"uid": "github/scikit-tda/DREiMac", "html_url": "https://rseng.github.io/software/repository/github/scikit-tda/DREiMac", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-tda/DREiMac"}, {"uid": "github/lnscan/mitoSplitter", "html_url": "https://rseng.github.io/software/repository/github/lnscan/mitoSplitter", "api_url": "https://rseng.github.io/software/api/repos/github/lnscan/mitoSplitter"}, {"uid": "github/daissi/thesias", "html_url": "https://rseng.github.io/software/repository/github/daissi/thesias", "api_url": "https://rseng.github.io/software/api/repos/github/daissi/thesias"}, {"uid": "github/ezer/PAFway", "html_url": "https://rseng.github.io/software/repository/github/ezer/PAFway", "api_url": "https://rseng.github.io/software/api/repos/github/ezer/PAFway"}, {"uid": "github/cosmo-ethz/hide", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/hide", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/hide"}, {"uid": "github/cosmo-ethz/seek", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/seek", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/seek"}, {"uid": "github/cosmo-ethz/CosmoHammer", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/CosmoHammer", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/CosmoHammer"}, {"uid": "github/CPM-project/MCPM", "html_url": "https://rseng.github.io/software/repository/github/CPM-project/MCPM", "api_url": "https://rseng.github.io/software/api/repos/github/CPM-project/MCPM"}, {"uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", "html_url": "https://rseng.github.io/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", "api_url": "https://rseng.github.io/software/api/repos/github/Critical-Infrastructure-Systems-Lab/PowNet"}, {"uid": "github/amiralih/MembraneAnalysis.jl", "html_url": "https://rseng.github.io/software/repository/github/amiralih/MembraneAnalysis.jl", "api_url": "https://rseng.github.io/software/api/repos/github/amiralih/MembraneAnalysis.jl"}, {"uid": "github/AlgoLab/shark", "html_url": "https://rseng.github.io/software/repository/github/AlgoLab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/AlgoLab/shark"}, {"uid": "github/MesserLab/SLiM", "html_url": "https://rseng.github.io/software/repository/github/MesserLab/SLiM", "api_url": "https://rseng.github.io/software/api/repos/github/MesserLab/SLiM"}, {"uid": "github/ECSHackWeek/impedance.py", "html_url": "https://rseng.github.io/software/repository/github/ECSHackWeek/impedance.py", "api_url": "https://rseng.github.io/software/api/repos/github/ECSHackWeek/impedance.py"}, {"uid": "github/bio-phys/asyncmd", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/asyncmd", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/asyncmd"}, {"uid": "github/bio-phys/BioEn", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/BioEn", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/BioEn"}, {"uid": "github/lgrcia/nuance", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/nuance", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/nuance"}, {"uid": "github/lgrcia/prose", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/prose", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/prose"}, {"uid": "github/nansencenter/DAPPER", "html_url": "https://rseng.github.io/software/repository/github/nansencenter/DAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/nansencenter/DAPPER"}, {"uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", "html_url": "https://rseng.github.io/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/IlianPihlajamaa/ModeCouplingTheory.jl"}, {"uid": "github/nyusngroup/pyMCZ", "html_url": "https://rseng.github.io/software/repository/github/nyusngroup/pyMCZ", "api_url": "https://rseng.github.io/software/api/repos/github/nyusngroup/pyMCZ"}, {"uid": "github/itpplasma/GORILLA", "html_url": "https://rseng.github.io/software/repository/github/itpplasma/GORILLA", "api_url": "https://rseng.github.io/software/api/repos/github/itpplasma/GORILLA"}, {"uid": "github/darioizzo/dcgp", "html_url": "https://rseng.github.io/software/repository/github/darioizzo/dcgp", "api_url": "https://rseng.github.io/software/api/repos/github/darioizzo/dcgp"}, {"uid": "github/WhaleConnect/whaleconnect", "html_url": "https://rseng.github.io/software/repository/github/WhaleConnect/whaleconnect", "api_url": "https://rseng.github.io/software/api/repos/github/WhaleConnect/whaleconnect"}, {"uid": "github/kcleal/gw", "html_url": "https://rseng.github.io/software/repository/github/kcleal/gw", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/gw"}, {"uid": "github/kcleal/dysgu", "html_url": "https://rseng.github.io/software/repository/github/kcleal/dysgu", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/dysgu"}, {"uid": "github/mikejohnson51/AHGestimation", "html_url": "https://rseng.github.io/software/repository/github/mikejohnson51/AHGestimation", "api_url": "https://rseng.github.io/software/api/repos/github/mikejohnson51/AHGestimation"}, {"uid": "github/RiccardoBiondi/segmentation", "html_url": "https://rseng.github.io/software/repository/github/RiccardoBiondi/segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/RiccardoBiondi/segmentation"}, {"uid": "github/pedro-acunha/SHEEP", "html_url": "https://rseng.github.io/software/repository/github/pedro-acunha/SHEEP", "api_url": "https://rseng.github.io/software/api/repos/github/pedro-acunha/SHEEP"}, {"uid": "github/TommasoRonconi/scampy", "html_url": "https://rseng.github.io/software/repository/github/TommasoRonconi/scampy", "api_url": "https://rseng.github.io/software/api/repos/github/TommasoRonconi/scampy"}, {"uid": "github/hyex-research/AquaFetch", "html_url": "https://rseng.github.io/software/repository/github/hyex-research/AquaFetch", "api_url": "https://rseng.github.io/software/api/repos/github/hyex-research/AquaFetch"}, {"uid": "github/DavidT3/DAXA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/DAXA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/DAXA"}, {"uid": "github/DavidT3/XGA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/XGA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/XGA"}, {"uid": "github/denglab/SeqSero", "html_url": "https://rseng.github.io/software/repository/github/denglab/SeqSero", "api_url": "https://rseng.github.io/software/api/repos/github/denglab/SeqSero"}, {"uid": "github/jmejia8/Metaheuristics.jl", "html_url": "https://rseng.github.io/software/repository/github/jmejia8/Metaheuristics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jmejia8/Metaheuristics.jl"}, {"uid": "github/ixakalabadie/ViSL3D", "html_url": "https://rseng.github.io/software/repository/github/ixakalabadie/ViSL3D", "api_url": "https://rseng.github.io/software/api/repos/github/ixakalabadie/ViSL3D"}, {"uid": "github/UCD4IDS/WaveletsExt.jl", "html_url": "https://rseng.github.io/software/repository/github/UCD4IDS/WaveletsExt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UCD4IDS/WaveletsExt.jl"}, {"uid": "github/morrowcj/remotePARTS", "html_url": "https://rseng.github.io/software/repository/github/morrowcj/remotePARTS", "api_url": "https://rseng.github.io/software/api/repos/github/morrowcj/remotePARTS"}, {"uid": "github/esheldon/ngmix", "html_url": "https://rseng.github.io/software/repository/github/esheldon/ngmix", "api_url": "https://rseng.github.io/software/api/repos/github/esheldon/ngmix"}, {"uid": "github/PavlidisLab/Gemma", "html_url": "https://rseng.github.io/software/repository/github/PavlidisLab/Gemma", "api_url": "https://rseng.github.io/software/api/repos/github/PavlidisLab/Gemma"}, {"uid": "github/abaleato/CARDiAC", "html_url": "https://rseng.github.io/software/repository/github/abaleato/CARDiAC", "api_url": "https://rseng.github.io/software/api/repos/github/abaleato/CARDiAC"}, {"uid": "github/russelllab/wesa", "html_url": "https://rseng.github.io/software/repository/github/russelllab/wesa", "api_url": "https://rseng.github.io/software/api/repos/github/russelllab/wesa"}, {"uid": "github/RBrearton/islatu", "html_url": "https://rseng.github.io/software/repository/github/RBrearton/islatu", "api_url": "https://rseng.github.io/software/api/repos/github/RBrearton/islatu"}, {"uid": "github/idruglab/hignn", "html_url": "https://rseng.github.io/software/repository/github/idruglab/hignn", "api_url": "https://rseng.github.io/software/api/repos/github/idruglab/hignn"}, {"uid": "github/Hyperthetical/DarkMatters", "html_url": "https://rseng.github.io/software/repository/github/Hyperthetical/DarkMatters", "api_url": "https://rseng.github.io/software/api/repos/github/Hyperthetical/DarkMatters"}, {"uid": "github/AlexandrosAntoniadis/ODUSSEAS", "html_url": "https://rseng.github.io/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", "api_url": "https://rseng.github.io/software/api/repos/github/AlexandrosAntoniadis/ODUSSEAS"}, {"uid": "github/sonoUnoTeam/sonoUno-desktop", "html_url": "https://rseng.github.io/software/repository/github/sonoUnoTeam/sonoUno-desktop", "api_url": "https://rseng.github.io/software/api/repos/github/sonoUnoTeam/sonoUno-desktop"}, {"uid": "github/benstahl92/deepSIP", "html_url": "https://rseng.github.io/software/repository/github/benstahl92/deepSIP", "api_url": "https://rseng.github.io/software/api/repos/github/benstahl92/deepSIP"}, {"uid": "github/kungfugo/BellDiagonalQudits.jl", "html_url": "https://rseng.github.io/software/repository/github/kungfugo/BellDiagonalQudits.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kungfugo/BellDiagonalQudits.jl"}, {"uid": "github/libgamera/GAMERA", "html_url": "https://rseng.github.io/software/repository/github/libgamera/GAMERA", "api_url": "https://rseng.github.io/software/api/repos/github/libgamera/GAMERA"}, {"uid": "github/baoxingsong/AnchorWave", "html_url": "https://rseng.github.io/software/repository/github/baoxingsong/AnchorWave", "api_url": "https://rseng.github.io/software/api/repos/github/baoxingsong/AnchorWave"}, {"uid": "github/Bioinformatics-Munich/scas_dashboard", "html_url": "https://rseng.github.io/software/repository/github/Bioinformatics-Munich/scas_dashboard", "api_url": "https://rseng.github.io/software/api/repos/github/Bioinformatics-Munich/scas_dashboard"}, {"uid": "github/robbievanleeuwen/section-properties", "html_url": "https://rseng.github.io/software/repository/github/robbievanleeuwen/section-properties", "api_url": "https://rseng.github.io/software/api/repos/github/robbievanleeuwen/section-properties"}, {"uid": "github/gui11aume/starcode", "html_url": "https://rseng.github.io/software/repository/github/gui11aume/starcode", "api_url": "https://rseng.github.io/software/api/repos/github/gui11aume/starcode"}, {"uid": "github/akcochrane/TEfits", "html_url": "https://rseng.github.io/software/repository/github/akcochrane/TEfits", "api_url": "https://rseng.github.io/software/api/repos/github/akcochrane/TEfits"}, {"uid": "github/pec27/hfof", "html_url": "https://rseng.github.io/software/repository/github/pec27/hfof", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/hfof"}, {"uid": "github/pec27/lizard", "html_url": "https://rseng.github.io/software/repository/github/pec27/lizard", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/lizard"}, {"uid": "github/pec27/smerfs", "html_url": "https://rseng.github.io/software/repository/github/pec27/smerfs", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/smerfs"}, {"uid": "github/agree019/DarkCapPy", "html_url": "https://rseng.github.io/software/repository/github/agree019/DarkCapPy", "api_url": "https://rseng.github.io/software/api/repos/github/agree019/DarkCapPy"}, {"uid": "github/JulioHC00/PEPITA", "html_url": "https://rseng.github.io/software/repository/github/JulioHC00/PEPITA", "api_url": "https://rseng.github.io/software/api/repos/github/JulioHC00/PEPITA"}, {"uid": "github/SISPO-developers/sispo", "html_url": "https://rseng.github.io/software/repository/github/SISPO-developers/sispo", "api_url": "https://rseng.github.io/software/api/repos/github/SISPO-developers/sispo"}, {"uid": "github/umbramortem/nProFit", "html_url": "https://rseng.github.io/software/repository/github/umbramortem/nProFit", "api_url": "https://rseng.github.io/software/api/repos/github/umbramortem/nProFit"}, {"uid": "github/hoechenberger/questplus", "html_url": "https://rseng.github.io/software/repository/github/hoechenberger/questplus", "api_url": "https://rseng.github.io/software/api/repos/github/hoechenberger/questplus"}, {"uid": "github/avigan/SPHERE", "html_url": "https://rseng.github.io/software/repository/github/avigan/SPHERE", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/SPHERE"}, {"uid": "github/avigan/pyZELDA", "html_url": "https://rseng.github.io/software/repository/github/avigan/pyZELDA", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/pyZELDA"}, {"uid": "github/JetBrains-Research/spbla", "html_url": "https://rseng.github.io/software/repository/github/JetBrains-Research/spbla", "api_url": "https://rseng.github.io/software/api/repos/github/JetBrains-Research/spbla"}, {"uid": "github/MariaTsantaki/FASMA-synthesis", "html_url": "https://rseng.github.io/software/repository/github/MariaTsantaki/FASMA-synthesis", "api_url": "https://rseng.github.io/software/api/repos/github/MariaTsantaki/FASMA-synthesis"}, {"uid": "github/johncwok/CategoricalTimeSeries.jl", "html_url": "https://rseng.github.io/software/repository/github/johncwok/CategoricalTimeSeries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/johncwok/CategoricalTimeSeries.jl"}, {"uid": "github/edgardomortiz/Captus", "html_url": "https://rseng.github.io/software/repository/github/edgardomortiz/Captus", "api_url": "https://rseng.github.io/software/api/repos/github/edgardomortiz/Captus"}, {"uid": "github/creaneroDIAS/beamModelTester", "html_url": "https://rseng.github.io/software/repository/github/creaneroDIAS/beamModelTester", "api_url": "https://rseng.github.io/software/api/repos/github/creaneroDIAS/beamModelTester"}, {"uid": "github/profjsb/deepCR", "html_url": "https://rseng.github.io/software/repository/github/profjsb/deepCR", "api_url": "https://rseng.github.io/software/api/repos/github/profjsb/deepCR"}, {"uid": "github/gdrouart/MrMoose", "html_url": "https://rseng.github.io/software/repository/github/gdrouart/MrMoose", "api_url": "https://rseng.github.io/software/api/repos/github/gdrouart/MrMoose"}, {"uid": "github/introlab/opentera", "html_url": "https://rseng.github.io/software/repository/github/introlab/opentera", "api_url": "https://rseng.github.io/software/api/repos/github/introlab/opentera"}, {"uid": "github/tqsd/photon_weave", "html_url": "https://rseng.github.io/software/repository/github/tqsd/photon_weave", "api_url": "https://rseng.github.io/software/api/repos/github/tqsd/photon_weave"}, {"uid": "github/bioinfodlsu/phage-host-prediction", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/phage-host-prediction", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/phage-host-prediction"}, {"uid": "github/bioinfodlsu/PHIStruct", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/PHIStruct", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/PHIStruct"}, {"uid": "github/WSWUP/agweather-qaqc", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/agweather-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/agweather-qaqc"}, {"uid": "github/WSWUP/gridwxcomp", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/gridwxcomp", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/gridwxcomp"}, {"uid": "github/wonderful1/CNV-PG", "html_url": "https://rseng.github.io/software/repository/github/wonderful1/CNV-PG", "api_url": "https://rseng.github.io/software/api/repos/github/wonderful1/CNV-PG"}, {"uid": "github/insilico/cncv", "html_url": "https://rseng.github.io/software/repository/github/insilico/cncv", "api_url": "https://rseng.github.io/software/api/repos/github/insilico/cncv"}, {"uid": "github/jteutenberg/downpore", "html_url": "https://rseng.github.io/software/repository/github/jteutenberg/downpore", "api_url": "https://rseng.github.io/software/api/repos/github/jteutenberg/downpore"}, {"uid": "github/QEF/q-e", "html_url": "https://rseng.github.io/software/repository/github/QEF/q-e", "api_url": "https://rseng.github.io/software/api/repos/github/QEF/q-e"}, {"uid": "github/subisarkar/JexoSim", "html_url": "https://rseng.github.io/software/repository/github/subisarkar/JexoSim", "api_url": "https://rseng.github.io/software/api/repos/github/subisarkar/JexoSim"}, {"uid": "github/ericsteinbring/World_Observatory", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/World_Observatory", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/World_Observatory"}, {"uid": "github/ericsteinbring/Special-Blurring", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/Special-Blurring", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/Special-Blurring"}, {"uid": "github/ericsteinbring/PDQ", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/PDQ", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/PDQ"}, {"uid": "github/sheinasim/HiFiAdapterFilt", "html_url": "https://rseng.github.io/software/repository/github/sheinasim/HiFiAdapterFilt", "api_url": "https://rseng.github.io/software/api/repos/github/sheinasim/HiFiAdapterFilt"}, {"uid": "github/mmore500/hstrat", "html_url": "https://rseng.github.io/software/repository/github/mmore500/hstrat", "api_url": "https://rseng.github.io/software/api/repos/github/mmore500/hstrat"}, {"uid": "github/Cambridge-ICCS/FTorch", "html_url": "https://rseng.github.io/software/repository/github/Cambridge-ICCS/FTorch", "api_url": "https://rseng.github.io/software/api/repos/github/Cambridge-ICCS/FTorch"}, {"uid": "github/CTU-Bern/presize", "html_url": "https://rseng.github.io/software/repository/github/CTU-Bern/presize", "api_url": "https://rseng.github.io/software/api/repos/github/CTU-Bern/presize"}, {"uid": "github/sybila/biodivine-aeon-py", "html_url": "https://rseng.github.io/software/repository/github/sybila/biodivine-aeon-py", "api_url": "https://rseng.github.io/software/api/repos/github/sybila/biodivine-aeon-py"}, {"uid": "github/murphycj/AGFusion", "html_url": "https://rseng.github.io/software/repository/github/murphycj/AGFusion", "api_url": "https://rseng.github.io/software/api/repos/github/murphycj/AGFusion"}, {"uid": "github/rmaphoh/AutoMorph", "html_url": "https://rseng.github.io/software/repository/github/rmaphoh/AutoMorph", "api_url": "https://rseng.github.io/software/api/repos/github/rmaphoh/AutoMorph"}, {"uid": "github/shihyuntang/igrins_rv", "html_url": "https://rseng.github.io/software/repository/github/shihyuntang/igrins_rv", "api_url": "https://rseng.github.io/software/api/repos/github/shihyuntang/igrins_rv"}, {"uid": "github/Gaius-Augustus/GALBA", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/GALBA", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/GALBA"}, {"uid": "github/Gaius-Augustus/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/Tiberius"}, {"uid": "github/Gaius-Augustus/BRAKER", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/BRAKER", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/BRAKER"}, {"uid": "github/Computational-NeuroGenetics/deMeta-beta", "html_url": "https://rseng.github.io/software/repository/github/Computational-NeuroGenetics/deMeta-beta", "api_url": "https://rseng.github.io/software/api/repos/github/Computational-NeuroGenetics/deMeta-beta"}, {"uid": "github/vgteam/vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg"}, {"uid": "github/vgteam/vg#vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg#vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg#vg"}, {"uid": "github/RandyRDavila/GraphCalc", "html_url": "https://rseng.github.io/software/repository/github/RandyRDavila/GraphCalc", "api_url": "https://rseng.github.io/software/api/repos/github/RandyRDavila/GraphCalc"}, {"uid": "github/palaimon/ipyannotator", "html_url": "https://rseng.github.io/software/repository/github/palaimon/ipyannotator", "api_url": "https://rseng.github.io/software/api/repos/github/palaimon/ipyannotator"}, {"uid": "github/tortellini-tools/action", "html_url": "https://rseng.github.io/software/repository/github/tortellini-tools/action", "api_url": "https://rseng.github.io/software/api/repos/github/tortellini-tools/action"}, {"uid": "github/lbr-stack/lbr_stack_doc", "html_url": "https://rseng.github.io/software/repository/github/lbr-stack/lbr_stack_doc", "api_url": "https://rseng.github.io/software/api/repos/github/lbr-stack/lbr_stack_doc"}, {"uid": "github/elixir-luxembourg/daisy", "html_url": "https://rseng.github.io/software/repository/github/elixir-luxembourg/daisy", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-luxembourg/daisy"}, {"uid": "github/geckos-survey/ngist", "html_url": "https://rseng.github.io/software/repository/github/geckos-survey/ngist", "api_url": "https://rseng.github.io/software/api/repos/github/geckos-survey/ngist"}, {"uid": "github/yuliang419/AstroNet-Triage", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Triage", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Triage"}, {"uid": "github/yuliang419/AstroNet-Vetting", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Vetting", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Vetting"}, {"uid": "github/geospace-code/h5fortran", "html_url": "https://rseng.github.io/software/repository/github/geospace-code/h5fortran", "api_url": "https://rseng.github.io/software/api/repos/github/geospace-code/h5fortran"}, {"uid": "github/felixchenier/kineticstoolkit", "html_url": "https://rseng.github.io/software/repository/github/felixchenier/kineticstoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/felixchenier/kineticstoolkit"}, {"uid": "github/bccp/nbodykit", "html_url": "https://rseng.github.io/software/repository/github/bccp/nbodykit", "api_url": "https://rseng.github.io/software/api/repos/github/bccp/nbodykit"}, {"uid": "github/TeaspoonTDA/teaspoon", "html_url": "https://rseng.github.io/software/repository/github/TeaspoonTDA/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/github/TeaspoonTDA/teaspoon"}, {"uid": "github/BobChallen/Basic-mzml-plotter", "html_url": "https://rseng.github.io/software/repository/github/BobChallen/Basic-mzml-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/BobChallen/Basic-mzml-plotter"}, {"uid": "github/AusSRC/SoFiAX", "html_url": "https://rseng.github.io/software/repository/github/AusSRC/SoFiAX", "api_url": "https://rseng.github.io/software/api/repos/github/AusSRC/SoFiAX"}, {"uid": "github/zhwm/SparsePro_Paper", "html_url": "https://rseng.github.io/software/repository/github/zhwm/SparsePro_Paper", "api_url": "https://rseng.github.io/software/api/repos/github/zhwm/SparsePro_Paper"}, {"uid": "github/ParBLiSS/FastANI", "html_url": "https://rseng.github.io/software/repository/github/ParBLiSS/FastANI", "api_url": "https://rseng.github.io/software/api/repos/github/ParBLiSS/FastANI"}, {"uid": "github/hamers/tpi", "html_url": "https://rseng.github.io/software/repository/github/hamers/tpi", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/tpi"}, {"uid": "github/hamers/secularmultiple", "html_url": "https://rseng.github.io/software/repository/github/hamers/secularmultiple", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/secularmultiple"}, {"uid": "github/3d-pli/fastpli", "html_url": "https://rseng.github.io/software/repository/github/3d-pli/fastpli", "api_url": "https://rseng.github.io/software/api/repos/github/3d-pli/fastpli"}, {"uid": "github/Lbalkenhol/candl", "html_url": "https://rseng.github.io/software/repository/github/Lbalkenhol/candl", "api_url": "https://rseng.github.io/software/api/repos/github/Lbalkenhol/candl"}, {"uid": "github/voting-tools/pref_voting", "html_url": "https://rseng.github.io/software/repository/github/voting-tools/pref_voting", "api_url": "https://rseng.github.io/software/api/repos/github/voting-tools/pref_voting"}, {"uid": "github/bluenote-1577/fairy", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/fairy", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/fairy"}, {"uid": "github/bluenote-1577/sylph", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/sylph", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/sylph"}, {"uid": "github/aibhleog/baryon-sweep", "html_url": "https://rseng.github.io/software/repository/github/aibhleog/baryon-sweep", "api_url": "https://rseng.github.io/software/api/repos/github/aibhleog/baryon-sweep"}, {"uid": "github/percolator/percolator", "html_url": "https://rseng.github.io/software/repository/github/percolator/percolator", "api_url": "https://rseng.github.io/software/api/repos/github/percolator/percolator"}, {"uid": "github/igvteam/igv-reports", "html_url": "https://rseng.github.io/software/repository/github/igvteam/igv-reports", "api_url": "https://rseng.github.io/software/api/repos/github/igvteam/igv-reports"}, {"uid": "github/octopus-sensing/octopus-sensing", "html_url": "https://rseng.github.io/software/repository/github/octopus-sensing/octopus-sensing", "api_url": "https://rseng.github.io/software/api/repos/github/octopus-sensing/octopus-sensing"}, {"uid": "github/fwhigh/stellar-locus-regression", "html_url": "https://rseng.github.io/software/repository/github/fwhigh/stellar-locus-regression", "api_url": "https://rseng.github.io/software/api/repos/github/fwhigh/stellar-locus-regression"}, {"uid": "github/PathoGenOmics-Lab/get_mnv", "html_url": "https://rseng.github.io/software/repository/github/PathoGenOmics-Lab/get_mnv", "api_url": "https://rseng.github.io/software/api/repos/github/PathoGenOmics-Lab/get_mnv"}, {"uid": "github/ketch/RK-Opt", "html_url": "https://rseng.github.io/software/repository/github/ketch/RK-Opt", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/RK-Opt"}, {"uid": "github/ketch/nodepy", "html_url": "https://rseng.github.io/software/repository/github/ketch/nodepy", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/nodepy"}, {"uid": "github/citation-file-format/cffconvert-github-action", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cffconvert-github-action", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cffconvert-github-action"}, {"uid": "github/citation-file-format/citation-file-format", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/citation-file-format", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/citation-file-format"}, {"uid": "github/citation-file-format/cff-initializer-javascript", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-initializer-javascript", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-initializer-javascript"}, {"uid": "github/citation-file-format/cff-converter-python", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-converter-python", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-converter-python"}, {"uid": "github/e-merlin/eMERLIN_CASA_pipeline", "html_url": "https://rseng.github.io/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/e-merlin/eMERLIN_CASA_pipeline"}, {"uid": "github/BASTAcode/BASTA", "html_url": "https://rseng.github.io/software/repository/github/BASTAcode/BASTA", "api_url": "https://rseng.github.io/software/api/repos/github/BASTAcode/BASTA"}, {"uid": "github/baiwenjia/ukbb_cardiac", "html_url": "https://rseng.github.io/software/repository/github/baiwenjia/ukbb_cardiac", "api_url": "https://rseng.github.io/software/api/repos/github/baiwenjia/ukbb_cardiac"}, {"uid": "github/AndreyTavleev/DiscVerSt", "html_url": "https://rseng.github.io/software/repository/github/AndreyTavleev/DiscVerSt", "api_url": "https://rseng.github.io/software/api/repos/github/AndreyTavleev/DiscVerSt"}, {"uid": "github/SwissClinicalTrialOrganisation/secuTrialR", "html_url": "https://rseng.github.io/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", "api_url": "https://rseng.github.io/software/api/repos/github/SwissClinicalTrialOrganisation/secuTrialR"}, {"uid": "github/shengjin/nii-c", "html_url": "https://rseng.github.io/software/repository/github/shengjin/nii-c", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/nii-c"}, {"uid": "github/shengjin/Nii", "html_url": "https://rseng.github.io/software/repository/github/shengjin/Nii", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/Nii"}, {"uid": "github/ndrakos/ICICLE", "html_url": "https://rseng.github.io/software/repository/github/ndrakos/ICICLE", "api_url": "https://rseng.github.io/software/api/repos/github/ndrakos/ICICLE"}, {"uid": "github/FAU-LAP/NOMAD-CAMELS", "html_url": "https://rseng.github.io/software/repository/github/FAU-LAP/NOMAD-CAMELS", "api_url": "https://rseng.github.io/software/api/repos/github/FAU-LAP/NOMAD-CAMELS"}, {"uid": "github/votca/xtp", "html_url": "https://rseng.github.io/software/repository/github/votca/xtp", "api_url": "https://rseng.github.io/software/api/repos/github/votca/xtp"}, {"uid": "github/dlinssen/sunbather", "html_url": "https://rseng.github.io/software/repository/github/dlinssen/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/dlinssen/sunbather"}, {"uid": "github/ahmedmagds/GNUVID", "html_url": "https://rseng.github.io/software/repository/github/ahmedmagds/GNUVID", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmagds/GNUVID"}, {"uid": "github/JieZheng-ShanghaiTech/PiLSL", "html_url": "https://rseng.github.io/software/repository/github/JieZheng-ShanghaiTech/PiLSL", "api_url": "https://rseng.github.io/software/api/repos/github/JieZheng-ShanghaiTech/PiLSL"}, {"uid": "github/greendw/AntabGMVA", "html_url": "https://rseng.github.io/software/repository/github/greendw/AntabGMVA", "api_url": "https://rseng.github.io/software/api/repos/github/greendw/AntabGMVA"}, {"uid": "github/carnival-data/carnival", "html_url": "https://rseng.github.io/software/repository/github/carnival-data/carnival", "api_url": "https://rseng.github.io/software/api/repos/github/carnival-data/carnival"}, {"uid": "github/zavolanlab/PAQR2", "html_url": "https://rseng.github.io/software/repository/github/zavolanlab/PAQR2", "api_url": "https://rseng.github.io/software/api/repos/github/zavolanlab/PAQR2"}, {"uid": "github/mrempel/geohexviz", "html_url": "https://rseng.github.io/software/repository/github/mrempel/geohexviz", "api_url": "https://rseng.github.io/software/api/repos/github/mrempel/geohexviz"}, {"uid": "github/flaminiafortuni/FORECAST", "html_url": "https://rseng.github.io/software/repository/github/flaminiafortuni/FORECAST", "api_url": "https://rseng.github.io/software/api/repos/github/flaminiafortuni/FORECAST"}, {"uid": "github/CQCL/qujax", "html_url": "https://rseng.github.io/software/repository/github/CQCL/qujax", "api_url": "https://rseng.github.io/software/api/repos/github/CQCL/qujax"}, {"uid": "github/stevenweaver/seqcomplexity", "html_url": "https://rseng.github.io/software/repository/github/stevenweaver/seqcomplexity", "api_url": "https://rseng.github.io/software/api/repos/github/stevenweaver/seqcomplexity"}, {"uid": "github/MDU-PHL/emmtyper", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/emmtyper", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/emmtyper"}, {"uid": "github/MDU-PHL/abritamr", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/abritamr", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/abritamr"}, {"uid": "github/aewallin/allantools", "html_url": "https://rseng.github.io/software/repository/github/aewallin/allantools", "api_url": "https://rseng.github.io/software/api/repos/github/aewallin/allantools"}, {"uid": "github/mentatpsi/OSGenome", "html_url": "https://rseng.github.io/software/repository/github/mentatpsi/OSGenome", "api_url": "https://rseng.github.io/software/api/repos/github/mentatpsi/OSGenome"}, {"uid": "github/redcap-tools/PyCap", "html_url": "https://rseng.github.io/software/repository/github/redcap-tools/PyCap", "api_url": "https://rseng.github.io/software/api/repos/github/redcap-tools/PyCap"}, {"uid": "github/meixichen/SpatialGEV", "html_url": "https://rseng.github.io/software/repository/github/meixichen/SpatialGEV", "api_url": "https://rseng.github.io/software/api/repos/github/meixichen/SpatialGEV"}, {"uid": "github/lucydot/effmass", "html_url": "https://rseng.github.io/software/repository/github/lucydot/effmass", "api_url": "https://rseng.github.io/software/api/repos/github/lucydot/effmass"}, {"uid": "github/nekStab/LightKrylov", "html_url": "https://rseng.github.io/software/repository/github/nekStab/LightKrylov", "api_url": "https://rseng.github.io/software/api/repos/github/nekStab/LightKrylov"}, {"uid": "github/Rhyd-Lewis/GCol", "html_url": "https://rseng.github.io/software/repository/github/Rhyd-Lewis/GCol", "api_url": "https://rseng.github.io/software/api/repos/github/Rhyd-Lewis/GCol"}, {"uid": "github/dmilakovic/QSOSIM10", "html_url": "https://rseng.github.io/software/repository/github/dmilakovic/QSOSIM10", "api_url": "https://rseng.github.io/software/api/repos/github/dmilakovic/QSOSIM10"}, {"uid": "github/JASHunt/Snapdragons", "html_url": "https://rseng.github.io/software/repository/github/JASHunt/Snapdragons", "api_url": "https://rseng.github.io/software/api/repos/github/JASHunt/Snapdragons"}, {"uid": "github/sncosmo/sncosmo", "html_url": "https://rseng.github.io/software/repository/github/sncosmo/sncosmo", "api_url": "https://rseng.github.io/software/api/repos/github/sncosmo/sncosmo"}, {"uid": "github/demorest/nanopipe", "html_url": "https://rseng.github.io/software/repository/github/demorest/nanopipe", "api_url": "https://rseng.github.io/software/api/repos/github/demorest/nanopipe"}, {"uid": "github/adriancorrendo/metrica", "html_url": "https://rseng.github.io/software/repository/github/adriancorrendo/metrica", "api_url": "https://rseng.github.io/software/api/repos/github/adriancorrendo/metrica"}, {"uid": "github/xastprl/darsakx", "html_url": "https://rseng.github.io/software/repository/github/xastprl/darsakx", "api_url": "https://rseng.github.io/software/api/repos/github/xastprl/darsakx"}, {"uid": "github/toros-astro/corral", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/corral", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/corral"}, {"uid": "github/toros-astro/astroalign-legacy", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/astroalign-legacy", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/astroalign-legacy"}, {"uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "html_url": "https://rseng.github.io/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "api_url": "https://rseng.github.io/software/api/repos/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions"}, {"uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "html_url": "https://rseng.github.io/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "api_url": "https://rseng.github.io/software/api/repos/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling"}, {"uid": "github/bluesky/bluesky", "html_url": "https://rseng.github.io/software/repository/github/bluesky/bluesky", "api_url": "https://rseng.github.io/software/api/repos/github/bluesky/bluesky"}, {"uid": "github/sgshulman/DGEM", "html_url": "https://rseng.github.io/software/repository/github/sgshulman/DGEM", "api_url": "https://rseng.github.io/software/api/repos/github/sgshulman/DGEM"}, {"uid": "github/AnantharamanLab/vRhyme", "html_url": "https://rseng.github.io/software/repository/github/AnantharamanLab/vRhyme", "api_url": "https://rseng.github.io/software/api/repos/github/AnantharamanLab/vRhyme"}, {"uid": "github/acerbilab/pybads", "html_url": "https://rseng.github.io/software/repository/github/acerbilab/pybads", "api_url": "https://rseng.github.io/software/api/repos/github/acerbilab/pybads"}, {"uid": "github/galtay/urchin", "html_url": "https://rseng.github.io/software/repository/github/galtay/urchin", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/urchin"}, {"uid": "github/galtay/sphray", "html_url": "https://rseng.github.io/software/repository/github/galtay/sphray", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/sphray"}, {"uid": "github/davidgardenier/frbcat", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbcat", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbcat"}, {"uid": "github/davidgardenier/frbpoppy", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbpoppy", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbpoppy"}, {"uid": "github/nichollsh/AGNI", "html_url": "https://rseng.github.io/software/repository/github/nichollsh/AGNI", "api_url": "https://rseng.github.io/software/api/repos/github/nichollsh/AGNI"}, {"uid": "github/cole-trapnell-lab/cufflinks", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/cufflinks", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/cufflinks"}, {"uid": "github/cole-trapnell-lab/monocle3", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/monocle3", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/monocle3"}, {"uid": "github/ebi-jdispatcher/taxonomy-resolver", "html_url": "https://rseng.github.io/software/repository/github/ebi-jdispatcher/taxonomy-resolver", "api_url": "https://rseng.github.io/software/api/repos/github/ebi-jdispatcher/taxonomy-resolver"}, {"uid": "github/rambaut/jebl2", "html_url": "https://rseng.github.io/software/repository/github/rambaut/jebl2", "api_url": "https://rseng.github.io/software/api/repos/github/rambaut/jebl2"}, {"uid": "github/katholt/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kleborate"}, {"uid": "github/katholt/Kaptive", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kaptive", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kaptive"}, {"uid": "github/katholt/srst2", "html_url": "https://rseng.github.io/software/repository/github/katholt/srst2", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/srst2"}, {"uid": "github/erikhom/aida", "html_url": "https://rseng.github.io/software/repository/github/erikhom/aida", "api_url": "https://rseng.github.io/software/api/repos/github/erikhom/aida"}, {"uid": "github/jdcphysics/validation", "html_url": "https://rseng.github.io/software/repository/github/jdcphysics/validation", "api_url": "https://rseng.github.io/software/api/repos/github/jdcphysics/validation"}, {"uid": "github/alexdaniel654/qlayers", "html_url": "https://rseng.github.io/software/repository/github/alexdaniel654/qlayers", "api_url": "https://rseng.github.io/software/api/repos/github/alexdaniel654/qlayers"}, {"uid": "github/CEA-MetroCarac/pystack3d", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/pystack3d", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/pystack3d"}, {"uid": "github/CEA-MetroCarac/fitspy", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/fitspy", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/fitspy"}, {"uid": "github/Markusjsommer/BalrogCPP", "html_url": "https://rseng.github.io/software/repository/github/Markusjsommer/BalrogCPP", "api_url": "https://rseng.github.io/software/api/repos/github/Markusjsommer/BalrogCPP"}, {"uid": "github/Taywee/args", "html_url": "https://rseng.github.io/software/repository/github/Taywee/args", "api_url": "https://rseng.github.io/software/api/repos/github/Taywee/args"}, {"uid": "github/AngryMaciek/hypercomplex", "html_url": "https://rseng.github.io/software/repository/github/AngryMaciek/hypercomplex", "api_url": "https://rseng.github.io/software/api/repos/github/AngryMaciek/hypercomplex"}, {"uid": "github/MouseLand/cellpose", "html_url": "https://rseng.github.io/software/repository/github/MouseLand/cellpose", "api_url": "https://rseng.github.io/software/api/repos/github/MouseLand/cellpose"}, {"uid": "github/cwieder/py-ssPA", "html_url": "https://rseng.github.io/software/repository/github/cwieder/py-ssPA", "api_url": "https://rseng.github.io/software/api/repos/github/cwieder/py-ssPA"}, {"uid": "github/snakesonabrain/groundhog", "html_url": "https://rseng.github.io/software/repository/github/snakesonabrain/groundhog", "api_url": "https://rseng.github.io/software/api/repos/github/snakesonabrain/groundhog"}, {"uid": "github/glass-dev/glass", "html_url": "https://rseng.github.io/software/repository/github/glass-dev/glass", "api_url": "https://rseng.github.io/software/api/repos/github/glass-dev/glass"}, {"uid": "github/aliojjati/MGCAMB", "html_url": "https://rseng.github.io/software/repository/github/aliojjati/MGCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/aliojjati/MGCAMB"}, {"uid": "github/AntonelliLab/seqcap_processor", "html_url": "https://rseng.github.io/software/repository/github/AntonelliLab/seqcap_processor", "api_url": "https://rseng.github.io/software/api/repos/github/AntonelliLab/seqcap_processor"}, {"uid": "github/RasmussenLab/vamb", "html_url": "https://rseng.github.io/software/repository/github/RasmussenLab/vamb", "api_url": "https://rseng.github.io/software/api/repos/github/RasmussenLab/vamb"}, {"uid": "github/jordanlab/STing", "html_url": "https://rseng.github.io/software/repository/github/jordanlab/STing", "api_url": "https://rseng.github.io/software/api/repos/github/jordanlab/STing"}, {"uid": "github/yangxiaolinyn/Lemon", "html_url": "https://rseng.github.io/software/repository/github/yangxiaolinyn/Lemon", "api_url": "https://rseng.github.io/software/api/repos/github/yangxiaolinyn/Lemon"}, {"uid": "github/DidierMurilloF/FielDHub", "html_url": "https://rseng.github.io/software/repository/github/DidierMurilloF/FielDHub", "api_url": "https://rseng.github.io/software/api/repos/github/DidierMurilloF/FielDHub"}, {"uid": "github/noraeisner/LATTE", "html_url": "https://rseng.github.io/software/repository/github/noraeisner/LATTE", "api_url": "https://rseng.github.io/software/api/repos/github/noraeisner/LATTE"}, {"uid": "github/dpthorngren/PlanetSlicer", "html_url": "https://rseng.github.io/software/repository/github/dpthorngren/PlanetSlicer", "api_url": "https://rseng.github.io/software/api/repos/github/dpthorngren/PlanetSlicer"}, {"uid": "github/Mik3M4n/BaCoN", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/BaCoN", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/BaCoN"}, {"uid": "github/Mik3M4n/EF-TIGRE", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/EF-TIGRE", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/EF-TIGRE"}, {"uid": "github/matteolucchini1/BHJet", "html_url": "https://rseng.github.io/software/repository/github/matteolucchini1/BHJet", "api_url": "https://rseng.github.io/software/api/repos/github/matteolucchini1/BHJet"}, {"uid": "github/fedbiomed/fedbiomed", "html_url": "https://rseng.github.io/software/repository/github/fedbiomed/fedbiomed", "api_url": "https://rseng.github.io/software/api/repos/github/fedbiomed/fedbiomed"}, {"uid": "github/xianggebenben/GraphSL", "html_url": "https://rseng.github.io/software/repository/github/xianggebenben/GraphSL", "api_url": "https://rseng.github.io/software/api/repos/github/xianggebenben/GraphSL"}, {"uid": "github/domschrei/mallob", "html_url": "https://rseng.github.io/software/repository/github/domschrei/mallob", "api_url": "https://rseng.github.io/software/api/repos/github/domschrei/mallob"}, {"uid": "github/dbuscher/pois", "html_url": "https://rseng.github.io/software/repository/github/dbuscher/pois", "api_url": "https://rseng.github.io/software/api/repos/github/dbuscher/pois"}, {"uid": "github/lmfit/lmfit-py", "html_url": "https://rseng.github.io/software/repository/github/lmfit/lmfit-py", "api_url": "https://rseng.github.io/software/api/repos/github/lmfit/lmfit-py"}, {"uid": "github/open-and-sustainable/prismaid", "html_url": "https://rseng.github.io/software/repository/github/open-and-sustainable/prismaid", "api_url": "https://rseng.github.io/software/api/repos/github/open-and-sustainable/prismaid"}, {"uid": "github/connor-makowski/type_enforced", "html_url": "https://rseng.github.io/software/repository/github/connor-makowski/type_enforced", "api_url": "https://rseng.github.io/software/api/repos/github/connor-makowski/type_enforced"}, {"uid": "github/flatironinstitute/nifty-ls", "html_url": "https://rseng.github.io/software/repository/github/flatironinstitute/nifty-ls", "api_url": "https://rseng.github.io/software/api/repos/github/flatironinstitute/nifty-ls"}, {"uid": "github/JianjunTan-Beijing/LPI-CSFFR", "html_url": "https://rseng.github.io/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", "api_url": "https://rseng.github.io/software/api/repos/github/JianjunTan-Beijing/LPI-CSFFR"}, {"uid": "github/rhdtownsend/gyre", "html_url": "https://rseng.github.io/software/repository/github/rhdtownsend/gyre", "api_url": "https://rseng.github.io/software/api/repos/github/rhdtownsend/gyre"}, {"uid": "github/HITS-AIN/PINK", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/PINK", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/PINK"}, {"uid": "github/HITS-AIN/GPCC.jl", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/GPCC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/GPCC.jl"}, {"uid": "github/kuadrat/data_slicer", "html_url": "https://rseng.github.io/software/repository/github/kuadrat/data_slicer", "api_url": "https://rseng.github.io/software/api/repos/github/kuadrat/data_slicer"}, {"uid": "github/spacetelescope/specviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specviz"}, {"uid": "github/spacetelescope/stginga", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stginga", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stginga"}, {"uid": "github/spacetelescope/stsynphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsynphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsynphot_refactor"}, {"uid": "github/spacetelescope/spaceKLIP", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/spaceKLIP", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/spaceKLIP"}, {"uid": "github/spacetelescope/astronify", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/astronify", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/astronify"}, {"uid": "github/spacetelescope/imexam", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/imexam", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/imexam"}, {"uid": "github/spacetelescope/exovetter", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/exovetter", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/exovetter"}, {"uid": "github/spacetelescope/mirage", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/mirage", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/mirage"}, {"uid": "github/spacetelescope/jdaviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/jdaviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/jdaviz"}, {"uid": "github/spacetelescope/specview", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specview", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specview"}, {"uid": "github/spacetelescope/pystortion", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/pystortion", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/pystortion"}, {"uid": "github/spacetelescope/synphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/synphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/synphot_refactor"}, {"uid": "github/spacetelescope/hst_cosmic_rays", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/hst_cosmic_rays", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/hst_cosmic_rays"}, {"uid": "github/spacetelescope/stsdas_stripped", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsdas_stripped", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsdas_stripped"}, {"uid": "github/GreenScheduler/cats", "html_url": "https://rseng.github.io/software/repository/github/GreenScheduler/cats", "api_url": "https://rseng.github.io/software/api/repos/github/GreenScheduler/cats"}, {"uid": "github/Ciela-Institute/caustics", "html_url": "https://rseng.github.io/software/repository/github/Ciela-Institute/caustics", "api_url": "https://rseng.github.io/software/api/repos/github/Ciela-Institute/caustics"}, {"uid": "github/gymreklab/GangSTR", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/GangSTR", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/GangSTR"}, {"uid": "github/gymreklab/chips", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/chips", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/chips"}, {"uid": "github/phylo42/EPIK", "html_url": "https://rseng.github.io/software/repository/github/phylo42/EPIK", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/EPIK"}, {"uid": "github/phylo42/RAPPAS", "html_url": "https://rseng.github.io/software/repository/github/phylo42/RAPPAS", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/RAPPAS"}, {"uid": "github/IanHeywood/oxkat", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/oxkat", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/oxkat"}, {"uid": "github/IanHeywood/pony3d", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/pony3d", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/pony3d"}, {"uid": "github/landlab/landlab", "html_url": "https://rseng.github.io/software/repository/github/landlab/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/landlab/landlab"}, {"uid": "github/BIC-MNI/libminc", "html_url": "https://rseng.github.io/software/repository/github/BIC-MNI/libminc", "api_url": "https://rseng.github.io/software/api/repos/github/BIC-MNI/libminc"}, {"uid": "github/ParisAstronomicalDataCentre/OPUS", "html_url": "https://rseng.github.io/software/repository/github/ParisAstronomicalDataCentre/OPUS", "api_url": "https://rseng.github.io/software/api/repos/github/ParisAstronomicalDataCentre/OPUS"}, {"uid": "github/christiangil/StellarSpectraObservationFitting.jl", "html_url": "https://rseng.github.io/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/christiangil/StellarSpectraObservationFitting.jl"}, {"uid": "github/kmlefran/aiida-aimall", "html_url": "https://rseng.github.io/software/repository/github/kmlefran/aiida-aimall", "api_url": "https://rseng.github.io/software/api/repos/github/kmlefran/aiida-aimall"}, {"uid": "github/lilyminium/psiresp", "html_url": "https://rseng.github.io/software/repository/github/lilyminium/psiresp", "api_url": "https://rseng.github.io/software/api/repos/github/lilyminium/psiresp"}, {"uid": "github/blackrim/phyutility", "html_url": "https://rseng.github.io/software/repository/github/blackrim/phyutility", "api_url": "https://rseng.github.io/software/api/repos/github/blackrim/phyutility"}, {"uid": "github/kingyin3613/RingsPy", "html_url": "https://rseng.github.io/software/repository/github/kingyin3613/RingsPy", "api_url": "https://rseng.github.io/software/api/repos/github/kingyin3613/RingsPy"}, {"uid": "github/JuliaGeo/CFTime.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeo/CFTime.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeo/CFTime.jl"}, {"uid": "github/ClaraLage/Portfolio-Transition", "html_url": "https://rseng.github.io/software/repository/github/ClaraLage/Portfolio-Transition", "api_url": "https://rseng.github.io/software/api/repos/github/ClaraLage/Portfolio-Transition"}, {"uid": "github/NASA-PDS/naif-pds4-bundler", "html_url": "https://rseng.github.io/software/repository/github/NASA-PDS/naif-pds4-bundler", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-PDS/naif-pds4-bundler"}, {"uid": "github/maxibor/sam2lca", "html_url": "https://rseng.github.io/software/repository/github/maxibor/sam2lca", "api_url": "https://rseng.github.io/software/api/repos/github/maxibor/sam2lca"}, {"uid": "github/ckm3/Py-PDM", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Py-PDM", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Py-PDM"}, {"uid": "github/ckm3/Deep-Transit", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Deep-Transit", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Deep-Transit"}, {"uid": "github/unmannedlab/ekf_cal", "html_url": "https://rseng.github.io/software/repository/github/unmannedlab/ekf_cal", "api_url": "https://rseng.github.io/software/api/repos/github/unmannedlab/ekf_cal"}, {"uid": "github/BerkeleyLab/caffeine", "html_url": "https://rseng.github.io/software/repository/github/BerkeleyLab/caffeine", "api_url": "https://rseng.github.io/software/api/repos/github/BerkeleyLab/caffeine"}, {"uid": "github/portsmouth/cmbview", "html_url": "https://rseng.github.io/software/repository/github/portsmouth/cmbview", "api_url": "https://rseng.github.io/software/api/repos/github/portsmouth/cmbview"}, {"uid": "github/ksahlin/strobealign", "html_url": "https://rseng.github.io/software/repository/github/ksahlin/strobealign", "api_url": "https://rseng.github.io/software/api/repos/github/ksahlin/strobealign"}, {"uid": "github/mihanke/athos", "html_url": "https://rseng.github.io/software/repository/github/mihanke/athos", "api_url": "https://rseng.github.io/software/api/repos/github/mihanke/athos"}, {"uid": "github/bokeh/bokeh", "html_url": "https://rseng.github.io/software/repository/github/bokeh/bokeh", "api_url": "https://rseng.github.io/software/api/repos/github/bokeh/bokeh"}, {"uid": "github/jbytecode/LinRegOutliers", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/LinRegOutliers", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/LinRegOutliers"}, {"uid": "github/jbytecode/OperationsResearchModels.jl", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/OperationsResearchModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/OperationsResearchModels.jl"}, {"uid": "github/jbytecode/JMcDM", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/JMcDM", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/JMcDM"}, {"uid": "github/eliotayache/GAMMA", "html_url": "https://rseng.github.io/software/repository/github/eliotayache/GAMMA", "api_url": "https://rseng.github.io/software/api/repos/github/eliotayache/GAMMA"}, {"uid": "github/liangcheng-hrbmu/EnrichDO", "html_url": "https://rseng.github.io/software/repository/github/liangcheng-hrbmu/EnrichDO", "api_url": "https://rseng.github.io/software/api/repos/github/liangcheng-hrbmu/EnrichDO"}, {"uid": "github/miriamkw/GluPredKit", "html_url": "https://rseng.github.io/software/repository/github/miriamkw/GluPredKit", "api_url": "https://rseng.github.io/software/api/repos/github/miriamkw/GluPredKit"}, {"uid": "github/ArisTr/PyRaTE", "html_url": "https://rseng.github.io/software/repository/github/ArisTr/PyRaTE", "api_url": "https://rseng.github.io/software/api/repos/github/ArisTr/PyRaTE"}, {"uid": "github/swiss-armed-forces/openburst", "html_url": "https://rseng.github.io/software/repository/github/swiss-armed-forces/openburst", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-armed-forces/openburst"}, {"uid": "github/prdm0/ropenblas", "html_url": "https://rseng.github.io/software/repository/github/prdm0/ropenblas", "api_url": "https://rseng.github.io/software/api/repos/github/prdm0/ropenblas"}, {"uid": "github/cvbuchem/LavAtmos", "html_url": "https://rseng.github.io/software/repository/github/cvbuchem/LavAtmos", "api_url": "https://rseng.github.io/software/api/repos/github/cvbuchem/LavAtmos"}, {"uid": "github/b-pardi/BraTaDio", "html_url": "https://rseng.github.io/software/repository/github/b-pardi/BraTaDio", "api_url": "https://rseng.github.io/software/api/repos/github/b-pardi/BraTaDio"}, {"uid": "github/BradyAJohnston/MolecularNodes", "html_url": "https://rseng.github.io/software/repository/github/BradyAJohnston/MolecularNodes", "api_url": "https://rseng.github.io/software/api/repos/github/BradyAJohnston/MolecularNodes"}, {"uid": "github/max-little/GRAPL", "html_url": "https://rseng.github.io/software/repository/github/max-little/GRAPL", "api_url": "https://rseng.github.io/software/api/repos/github/max-little/GRAPL"}, {"uid": "github/ictr/covid19-outbreak-simulator", "html_url": "https://rseng.github.io/software/repository/github/ictr/covid19-outbreak-simulator", "api_url": "https://rseng.github.io/software/api/repos/github/ictr/covid19-outbreak-simulator"}, {"uid": "github/nawrockie/vadr", "html_url": "https://rseng.github.io/software/repository/github/nawrockie/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/nawrockie/vadr"}, {"uid": "github/PyDL/cat-puma", "html_url": "https://rseng.github.io/software/repository/github/PyDL/cat-puma", "api_url": "https://rseng.github.io/software/api/repos/github/PyDL/cat-puma"}, {"uid": "github/girder/viime", "html_url": "https://rseng.github.io/software/repository/github/girder/viime", "api_url": "https://rseng.github.io/software/api/repos/github/girder/viime"}, {"uid": "github/ComputationalPhysiology/simcardems", "html_url": "https://rseng.github.io/software/repository/github/ComputationalPhysiology/simcardems", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalPhysiology/simcardems"}, {"uid": "github/jakelever/civicmine", "html_url": "https://rseng.github.io/software/repository/github/jakelever/civicmine", "api_url": "https://rseng.github.io/software/api/repos/github/jakelever/civicmine"}, {"uid": "github/PaulHancock/Aegean", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Aegean", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Aegean"}, {"uid": "github/PaulHancock/Robbie", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Robbie", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Robbie"}, {"uid": "github/hemantaph/gwsnr", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/gwsnr", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/gwsnr"}, {"uid": "github/hemantaph/ler", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/ler", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/ler"}, {"uid": "github/standage/AEGeAn", "html_url": "https://rseng.github.io/software/repository/github/standage/AEGeAn", "api_url": "https://rseng.github.io/software/api/repos/github/standage/AEGeAn"}, {"uid": "github/fusk-kpu/StressResponseGenesAtlas", "html_url": "https://rseng.github.io/software/repository/github/fusk-kpu/StressResponseGenesAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/fusk-kpu/StressResponseGenesAtlas"}, {"uid": "github/jGetMove/jGetMove", "html_url": "https://rseng.github.io/software/repository/github/jGetMove/jGetMove", "api_url": "https://rseng.github.io/software/api/repos/github/jGetMove/jGetMove"}, {"uid": "github/bowang-lab/scGPT", "html_url": "https://rseng.github.io/software/repository/github/bowang-lab/scGPT", "api_url": "https://rseng.github.io/software/api/repos/github/bowang-lab/scGPT"}, {"uid": "github/mortonne/psifr", "html_url": "https://rseng.github.io/software/repository/github/mortonne/psifr", "api_url": "https://rseng.github.io/software/api/repos/github/mortonne/psifr"}, {"uid": "github/lsncibb/microbiomeGWAS", "html_url": "https://rseng.github.io/software/repository/github/lsncibb/microbiomeGWAS", "api_url": "https://rseng.github.io/software/api/repos/github/lsncibb/microbiomeGWAS"}, {"uid": "github/SynthSys/pyOmeroUpload", "html_url": "https://rseng.github.io/software/repository/github/SynthSys/pyOmeroUpload", "api_url": "https://rseng.github.io/software/api/repos/github/SynthSys/pyOmeroUpload"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts"}, {"uid": "github/bonsai-team/Porechop_ABI", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/Porechop_ABI", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/Porechop_ABI"}, {"uid": "github/bonsai-team/matam", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/matam", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/matam"}, {"uid": "github/pytoolz/toolz", "html_url": "https://rseng.github.io/software/repository/github/pytoolz/toolz", "api_url": "https://rseng.github.io/software/api/repos/github/pytoolz/toolz"}, {"uid": "github/HuttleyLab/DiverseSeq", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/DiverseSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/DiverseSeq"}, {"uid": "github/HuttleyLab/scitrack", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/scitrack", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/scitrack"}, {"uid": "github/DrJCarson/BoundedCoalescent", "html_url": "https://rseng.github.io/software/repository/github/DrJCarson/BoundedCoalescent", "api_url": "https://rseng.github.io/software/api/repos/github/DrJCarson/BoundedCoalescent"}, {"uid": "github/huiwenke/MineProt", "html_url": "https://rseng.github.io/software/repository/github/huiwenke/MineProt", "api_url": "https://rseng.github.io/software/api/repos/github/huiwenke/MineProt"}, {"uid": "github/florpi/sunbird", "html_url": "https://rseng.github.io/software/repository/github/florpi/sunbird", "api_url": "https://rseng.github.io/software/api/repos/github/florpi/sunbird"}, {"uid": "github/callendeprieto/ferre", "html_url": "https://rseng.github.io/software/repository/github/callendeprieto/ferre", "api_url": "https://rseng.github.io/software/api/repos/github/callendeprieto/ferre"}, {"uid": "github/wtraylor/modular_megafauna_model", "html_url": "https://rseng.github.io/software/repository/github/wtraylor/modular_megafauna_model", "api_url": "https://rseng.github.io/software/api/repos/github/wtraylor/modular_megafauna_model"}, {"uid": "github/caselawanalytics/CaseLawAnalytics", "html_url": "https://rseng.github.io/software/repository/github/caselawanalytics/CaseLawAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/caselawanalytics/CaseLawAnalytics"}, {"uid": "github/magnusmanske/snpomatic", "html_url": "https://rseng.github.io/software/repository/github/magnusmanske/snpomatic", "api_url": "https://rseng.github.io/software/api/repos/github/magnusmanske/snpomatic"}, {"uid": "github/JCGoran/coffe", "html_url": "https://rseng.github.io/software/repository/github/JCGoran/coffe", "api_url": "https://rseng.github.io/software/api/repos/github/JCGoran/coffe"}, {"uid": "github/fair-software/howfairis", "html_url": "https://rseng.github.io/software/repository/github/fair-software/howfairis", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/howfairis"}, {"uid": "github/fair-software/fairtally", "html_url": "https://rseng.github.io/software/repository/github/fair-software/fairtally", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/fairtally"}, {"uid": "github/yupidevs/pactus", "html_url": "https://rseng.github.io/software/repository/github/yupidevs/pactus", "api_url": "https://rseng.github.io/software/api/repos/github/yupidevs/pactus"}, {"uid": "github/PACurran/MCSpearman", "html_url": "https://rseng.github.io/software/repository/github/PACurran/MCSpearman", "api_url": "https://rseng.github.io/software/api/repos/github/PACurran/MCSpearman"}, {"uid": "github/JannisHoch/copro", "html_url": "https://rseng.github.io/software/repository/github/JannisHoch/copro", "api_url": "https://rseng.github.io/software/api/repos/github/JannisHoch/copro"}, {"uid": "github/WGS-TB/MentaLiST", "html_url": "https://rseng.github.io/software/repository/github/WGS-TB/MentaLiST", "api_url": "https://rseng.github.io/software/api/repos/github/WGS-TB/MentaLiST"}, {"uid": "github/Valires/er-evaluation", "html_url": "https://rseng.github.io/software/repository/github/Valires/er-evaluation", "api_url": "https://rseng.github.io/software/api/repos/github/Valires/er-evaluation"}, {"uid": "github/JHayoz/CROCODILE", "html_url": "https://rseng.github.io/software/repository/github/JHayoz/CROCODILE", "api_url": "https://rseng.github.io/software/api/repos/github/JHayoz/CROCODILE"}, {"uid": "github/zgazak/TAP", "html_url": "https://rseng.github.io/software/repository/github/zgazak/TAP", "api_url": "https://rseng.github.io/software/api/repos/github/zgazak/TAP"}, {"uid": "github/DotBots/qrkey", "html_url": "https://rseng.github.io/software/repository/github/DotBots/qrkey", "api_url": "https://rseng.github.io/software/api/repos/github/DotBots/qrkey"}, {"uid": "github/JuliaPlots/Makie.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPlots/Makie.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPlots/Makie.jl"}, {"uid": "github/vibbits/phyd3", "html_url": "https://rseng.github.io/software/repository/github/vibbits/phyd3", "api_url": "https://rseng.github.io/software/api/repos/github/vibbits/phyd3"}, {"uid": "github/axgoujon/convex_ridge_regularizers", "html_url": "https://rseng.github.io/software/repository/github/axgoujon/convex_ridge_regularizers", "api_url": "https://rseng.github.io/software/api/repos/github/axgoujon/convex_ridge_regularizers"}, {"uid": "github/mattyowl/astLib", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/astLib", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/astLib"}, {"uid": "github/mattyowl/fitScalingRelation", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/fitScalingRelation", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/fitScalingRelation"}, {"uid": "github/djones1040/PythonPhot", "html_url": "https://rseng.github.io/software/repository/github/djones1040/PythonPhot", "api_url": "https://rseng.github.io/software/api/repos/github/djones1040/PythonPhot"}, {"uid": "github/alixlam/fmristroke", "html_url": "https://rseng.github.io/software/repository/github/alixlam/fmristroke", "api_url": "https://rseng.github.io/software/api/repos/github/alixlam/fmristroke"}, {"uid": "github/faircloth-lab/phyluce", "html_url": "https://rseng.github.io/software/repository/github/faircloth-lab/phyluce", "api_url": "https://rseng.github.io/software/api/repos/github/faircloth-lab/phyluce"}, {"uid": "github/henrikmelin/h3ppy", "html_url": "https://rseng.github.io/software/repository/github/henrikmelin/h3ppy", "api_url": "https://rseng.github.io/software/api/repos/github/henrikmelin/h3ppy"}, {"uid": "github/cmelab/flowerMD", "html_url": "https://rseng.github.io/software/repository/github/cmelab/flowerMD", "api_url": "https://rseng.github.io/software/api/repos/github/cmelab/flowerMD"}, {"uid": "github/hnikaein/stark", "html_url": "https://rseng.github.io/software/repository/github/hnikaein/stark", "api_url": "https://rseng.github.io/software/api/repos/github/hnikaein/stark"}, {"uid": "github/nanoporetech/index.html#", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/index.html#", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/index.html#"}, {"uid": "github/nanoporetech/pychopper", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pychopper", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pychopper"}, {"uid": "github/nanoporetech/tombo", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/tombo", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/tombo"}, {"uid": "github/nanoporetech/pinfish", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pinfish", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pinfish"}, {"uid": "github/nanoporetech/scrappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/scrappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/scrappie"}, {"uid": "github/nanoporetech/flappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/flappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/flappie"}, {"uid": "github/nanoporetech/ont_fast5_api", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/ont_fast5_api", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/ont_fast5_api"}, {"uid": "github/nanoporetech/qcat", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/qcat", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/qcat"}, {"uid": "github/nanoporetech/dorado", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/dorado", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/dorado"}, {"uid": "github/nanoporetech/medaka", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/medaka", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/medaka"}, {"uid": "github/nanoporetech/megalodon", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/megalodon", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/megalodon"}, {"uid": "github/nanoporetech/pomoxis", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pomoxis", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pomoxis"}, {"uid": "github/ejeschke/ginga", "html_url": "https://rseng.github.io/software/repository/github/ejeschke/ginga", "api_url": "https://rseng.github.io/software/api/repos/github/ejeschke/ginga"}, {"uid": "github/Mihart-web/CARBONETTE", "html_url": "https://rseng.github.io/software/repository/github/Mihart-web/CARBONETTE", "api_url": "https://rseng.github.io/software/api/repos/github/Mihart-web/CARBONETTE"}, {"uid": "github/qpv-research-group/solcore5", "html_url": "https://rseng.github.io/software/repository/github/qpv-research-group/solcore5", "api_url": "https://rseng.github.io/software/api/repos/github/qpv-research-group/solcore5"}, {"uid": "github/alexdobin/STAR", "html_url": "https://rseng.github.io/software/repository/github/alexdobin/STAR", "api_url": "https://rseng.github.io/software/api/repos/github/alexdobin/STAR"}, {"uid": "github/Yu-Group/simChef", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/simChef", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/simChef"}, {"uid": "github/Yu-Group/veridical-flow", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/veridical-flow", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/veridical-flow"}, {"uid": "github/pavolgaj/OCFit", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/OCFit", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/OCFit"}, {"uid": "github/pavolgaj/ObsPlanner", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/ObsPlanner", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/ObsPlanner"}, {"uid": "github/CisnerosResearch/LICHEM", "html_url": "https://rseng.github.io/software/repository/github/CisnerosResearch/LICHEM", "api_url": "https://rseng.github.io/software/api/repos/github/CisnerosResearch/LICHEM"}, {"uid": "github/nonlocalmodels/NLMech", "html_url": "https://rseng.github.io/software/repository/github/nonlocalmodels/NLMech", "api_url": "https://rseng.github.io/software/api/repos/github/nonlocalmodels/NLMech"}, {"uid": "github/maickrau/MBG", "html_url": "https://rseng.github.io/software/repository/github/maickrau/MBG", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/MBG"}, {"uid": "github/maickrau/GraphAligner", "html_url": "https://rseng.github.io/software/repository/github/maickrau/GraphAligner", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/GraphAligner"}, {"uid": "github/TeamCOMPAS/COMPAS", "html_url": "https://rseng.github.io/software/repository/github/TeamCOMPAS/COMPAS", "api_url": "https://rseng.github.io/software/api/repos/github/TeamCOMPAS/COMPAS"}, {"uid": "github/seamusclarke/rjplots", "html_url": "https://rseng.github.io/software/repository/github/seamusclarke/rjplots", "api_url": "https://rseng.github.io/software/api/repos/github/seamusclarke/rjplots"}, {"uid": "github/cbirdferrer/collatrix", "html_url": "https://rseng.github.io/software/repository/github/cbirdferrer/collatrix", "api_url": "https://rseng.github.io/software/api/repos/github/cbirdferrer/collatrix"}, {"uid": "github/fakedrtom/oncogemini", "html_url": "https://rseng.github.io/software/repository/github/fakedrtom/oncogemini", "api_url": "https://rseng.github.io/software/api/repos/github/fakedrtom/oncogemini"}, {"uid": "github/StingraySoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/stingray"}, {"uid": "github/StingraySoftware/HENDRICS", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/HENDRICS", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/HENDRICS"}, {"uid": "github/eisascience/HISTA", "html_url": "https://rseng.github.io/software/repository/github/eisascience/HISTA", "api_url": "https://rseng.github.io/software/api/repos/github/eisascience/HISTA"}, {"uid": "github/olivares-j/Kalkayotl", "html_url": "https://rseng.github.io/software/repository/github/olivares-j/Kalkayotl", "api_url": "https://rseng.github.io/software/api/repos/github/olivares-j/Kalkayotl"}, {"uid": "github/andyphilips/dynamac", "html_url": "https://rseng.github.io/software/repository/github/andyphilips/dynamac", "api_url": "https://rseng.github.io/software/api/repos/github/andyphilips/dynamac"}, {"uid": "github/JacobBumgarner/VesselVio", "html_url": "https://rseng.github.io/software/repository/github/JacobBumgarner/VesselVio", "api_url": "https://rseng.github.io/software/api/repos/github/JacobBumgarner/VesselVio"}, {"uid": "github/simonehagey/orbdot", "html_url": "https://rseng.github.io/software/repository/github/simonehagey/orbdot", "api_url": "https://rseng.github.io/software/api/repos/github/simonehagey/orbdot"}, {"uid": "github/pencil-code/pencil-code", "html_url": "https://rseng.github.io/software/repository/github/pencil-code/pencil-code", "api_url": "https://rseng.github.io/software/api/repos/github/pencil-code/pencil-code"}, {"uid": "github/vatlab/sos-notebook", "html_url": "https://rseng.github.io/software/repository/github/vatlab/sos-notebook", "api_url": "https://rseng.github.io/software/api/repos/github/vatlab/sos-notebook"}, {"uid": "github/ECP-copa/Cabana", "html_url": "https://rseng.github.io/software/repository/github/ECP-copa/Cabana", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-copa/Cabana"}, {"uid": "github/MayaWaves/mayawaves", "html_url": "https://rseng.github.io/software/repository/github/MayaWaves/mayawaves", "api_url": "https://rseng.github.io/software/api/repos/github/MayaWaves/mayawaves"}, {"uid": "github/brocklab/pycashier", "html_url": "https://rseng.github.io/software/repository/github/brocklab/pycashier", "api_url": "https://rseng.github.io/software/api/repos/github/brocklab/pycashier"}, {"uid": "github/guynir42/radon", "html_url": "https://rseng.github.io/software/repository/github/guynir42/radon", "api_url": "https://rseng.github.io/software/api/repos/github/guynir42/radon"}, {"uid": "github/Starlink/hds-v5", "html_url": "https://rseng.github.io/software/repository/github/Starlink/hds-v5", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/hds-v5"}, {"uid": "github/Starlink/perl-Starlink-Autoastrom", "html_url": "https://rseng.github.io/software/repository/github/Starlink/perl-Starlink-Autoastrom", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/perl-Starlink-Autoastrom"}, {"uid": "github/Starlink/ORAC-DR", "html_url": "https://rseng.github.io/software/repository/github/Starlink/ORAC-DR", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/ORAC-DR"}, {"uid": "github/Starlink/starlink", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starlink", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starlink"}, {"uid": "github/Starlink/starjava", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starjava", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starjava"}, {"uid": "github/Starlink/aspic", "html_url": "https://rseng.github.io/software/repository/github/Starlink/aspic", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/aspic"}, {"uid": "github/Starlink/palpy", "html_url": "https://rseng.github.io/software/repository/github/Starlink/palpy", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/palpy"}, {"uid": "github/Starlink/pal", "html_url": "https://rseng.github.io/software/repository/github/Starlink/pal", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/pal"}, {"uid": "github/lime-rt/lime", "html_url": "https://rseng.github.io/software/repository/github/lime-rt/lime", "api_url": "https://rseng.github.io/software/api/repos/github/lime-rt/lime"}, {"uid": "github/PixelgenTechnologies/pixelator", "html_url": "https://rseng.github.io/software/repository/github/PixelgenTechnologies/pixelator", "api_url": "https://rseng.github.io/software/api/repos/github/PixelgenTechnologies/pixelator"}, {"uid": "github/mwess/GreedyFHist", "html_url": "https://rseng.github.io/software/repository/github/mwess/GreedyFHist", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/GreedyFHist"}, {"uid": "github/mwess/miit", "html_url": "https://rseng.github.io/software/repository/github/mwess/miit", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/miit"}, {"uid": "github/leonzheng2/butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/butterfly"}, {"uid": "github/leonzheng2/efficient-butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/efficient-butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/efficient-butterfly"}, {"uid": "github/R-Computing-Lab/ggpedigree", "html_url": "https://rseng.github.io/software/repository/github/R-Computing-Lab/ggpedigree", "api_url": "https://rseng.github.io/software/api/repos/github/R-Computing-Lab/ggpedigree"}, {"uid": "github/fchuffar/protopackage", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/protopackage", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/protopackage"}, {"uid": "github/fchuffar/epimedtools", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/epimedtools", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/epimedtools"}, {"uid": "github/fchuffar/dmethr", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/dmethr", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/dmethr"}, {"uid": "github/psi4/psi4", "html_url": "https://rseng.github.io/software/repository/github/psi4/psi4", "api_url": "https://rseng.github.io/software/api/repos/github/psi4/psi4"}, {"uid": "github/Jammy2211/PyAutoLens", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoLens", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoLens"}, {"uid": "github/Jammy2211/PyAutoCTI", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoCTI", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoCTI"}, {"uid": "github/Jammy2211/PyAutoGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoGalaxy"}, {"uid": "github/atfrank/PyShifts", "html_url": "https://rseng.github.io/software/repository/github/atfrank/PyShifts", "api_url": "https://rseng.github.io/software/api/repos/github/atfrank/PyShifts"}, {"uid": "github/evanoconnor/GR1D", "html_url": "https://rseng.github.io/software/repository/github/evanoconnor/GR1D", "api_url": "https://rseng.github.io/software/api/repos/github/evanoconnor/GR1D"}, {"uid": "github/fairdataihub/SPARClink", "html_url": "https://rseng.github.io/software/repository/github/fairdataihub/SPARClink", "api_url": "https://rseng.github.io/software/api/repos/github/fairdataihub/SPARClink"}, {"uid": "github/creanero/locus", "html_url": "https://rseng.github.io/software/repository/github/creanero/locus", "api_url": "https://rseng.github.io/software/api/repos/github/creanero/locus"}, {"uid": "github/DLTK/DLTK", "html_url": "https://rseng.github.io/software/repository/github/DLTK/DLTK", "api_url": "https://rseng.github.io/software/api/repos/github/DLTK/DLTK"}, {"uid": "github/sjforeman/bskit", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/bskit", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/bskit"}, {"uid": "github/sjforeman/StringFast", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/StringFast", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/StringFast"}, {"uid": "github/carpyncho/carpyncho-py", "html_url": "https://rseng.github.io/software/repository/github/carpyncho/carpyncho-py", "api_url": "https://rseng.github.io/software/api/repos/github/carpyncho/carpyncho-py"}, {"uid": "github/vavrines/Kinetic.jl", "html_url": "https://rseng.github.io/software/repository/github/vavrines/Kinetic.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vavrines/Kinetic.jl"}, {"uid": "github/IPESE/REHO", "html_url": "https://rseng.github.io/software/repository/github/IPESE/REHO", "api_url": "https://rseng.github.io/software/api/repos/github/IPESE/REHO"}, {"uid": "github/MartianColonist/POSEIDON", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/POSEIDON", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/POSEIDON"}, {"uid": "github/MartianColonist/Cthulhu", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/Cthulhu", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/Cthulhu"}, {"uid": "github/CIbiv/guaCAMOLE", "html_url": "https://rseng.github.io/software/repository/github/CIbiv/guaCAMOLE", "api_url": "https://rseng.github.io/software/api/repos/github/CIbiv/guaCAMOLE"}, {"uid": "github/bhi-kimlab/StressGenePred", "html_url": "https://rseng.github.io/software/repository/github/bhi-kimlab/StressGenePred", "api_url": "https://rseng.github.io/software/api/repos/github/bhi-kimlab/StressGenePred"}, {"uid": "github/kuenzelab/ENDURE", "html_url": "https://rseng.github.io/software/repository/github/kuenzelab/ENDURE", "api_url": "https://rseng.github.io/software/api/repos/github/kuenzelab/ENDURE"}, {"uid": "github/TomKellyGenetics/graphsim", "html_url": "https://rseng.github.io/software/repository/github/TomKellyGenetics/graphsim", "api_url": "https://rseng.github.io/software/api/repos/github/TomKellyGenetics/graphsim"}, {"uid": "github/mswzeus/TargetNet", "html_url": "https://rseng.github.io/software/repository/github/mswzeus/TargetNet", "api_url": "https://rseng.github.io/software/api/repos/github/mswzeus/TargetNet"}, {"uid": "github/BorgwardtLab/simbsig", "html_url": "https://rseng.github.io/software/repository/github/BorgwardtLab/simbsig", "api_url": "https://rseng.github.io/software/api/repos/github/BorgwardtLab/simbsig"}, {"uid": "github/JuliaDiff/ReverseDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ReverseDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ReverseDiff.jl"}, {"uid": "github/JuliaDiff/ForwardDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ForwardDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ForwardDiff.jl"}, {"uid": "github/oskarhs/AutoHist.jl", "html_url": "https://rseng.github.io/software/repository/github/oskarhs/AutoHist.jl", "api_url": "https://rseng.github.io/software/api/repos/github/oskarhs/AutoHist.jl"}, {"uid": "github/parmoo/parmoo", "html_url": "https://rseng.github.io/software/repository/github/parmoo/parmoo", "api_url": "https://rseng.github.io/software/api/repos/github/parmoo/parmoo"}, {"uid": "github/thomas0809/MolScribe", "html_url": "https://rseng.github.io/software/repository/github/thomas0809/MolScribe", "api_url": "https://rseng.github.io/software/api/repos/github/thomas0809/MolScribe"}, {"uid": "github/nextgenusfs/funannotate", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/funannotate", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/funannotate"}, {"uid": "github/nextgenusfs/amptk", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/amptk", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/amptk"}, {"uid": "github/saltastro/pyhrs", "html_url": "https://rseng.github.io/software/repository/github/saltastro/pyhrs", "api_url": "https://rseng.github.io/software/api/repos/github/saltastro/pyhrs"}, {"uid": "github/PhilippJunk/homelette", "html_url": "https://rseng.github.io/software/repository/github/PhilippJunk/homelette", "api_url": "https://rseng.github.io/software/api/repos/github/PhilippJunk/homelette"}, {"uid": "github/efpl-columbia/PointClouds.jl", "html_url": "https://rseng.github.io/software/repository/github/efpl-columbia/PointClouds.jl", "api_url": "https://rseng.github.io/software/api/repos/github/efpl-columbia/PointClouds.jl"}, {"uid": "github/valeriabonapersona/repair", "html_url": "https://rseng.github.io/software/repository/github/valeriabonapersona/repair", "api_url": "https://rseng.github.io/software/api/repos/github/valeriabonapersona/repair"}, {"uid": "github/jmschrei/pomegranate", "html_url": "https://rseng.github.io/software/repository/github/jmschrei/pomegranate", "api_url": "https://rseng.github.io/software/api/repos/github/jmschrei/pomegranate"}, {"uid": "github/hishamhm/htop", "html_url": "https://rseng.github.io/software/repository/github/hishamhm/htop", "api_url": "https://rseng.github.io/software/api/repos/github/hishamhm/htop"}, {"uid": "github/inesbmartins02/HYMET", "html_url": "https://rseng.github.io/software/repository/github/inesbmartins02/HYMET", "api_url": "https://rseng.github.io/software/api/repos/github/inesbmartins02/HYMET"}, {"uid": "github/emerge-erc/ALminer", "html_url": "https://rseng.github.io/software/repository/github/emerge-erc/ALminer", "api_url": "https://rseng.github.io/software/api/repos/github/emerge-erc/ALminer"}, {"uid": "github/Qiskit/qiskit-experiments", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/qiskit-experiments", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/qiskit-experiments"}, {"uid": "github/Qiskit/rustworkx", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/rustworkx", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/rustworkx"}, {"uid": "github/nliulab/HRnV-Calc", "html_url": "https://rseng.github.io/software/repository/github/nliulab/HRnV-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/nliulab/HRnV-Calc"}, {"uid": "github/pangenome/smoothxg", "html_url": "https://rseng.github.io/software/repository/github/pangenome/smoothxg", "api_url": "https://rseng.github.io/software/api/repos/github/pangenome/smoothxg"}, {"uid": "github/rcarragh/c212", "html_url": "https://rseng.github.io/software/repository/github/rcarragh/c212", "api_url": "https://rseng.github.io/software/api/repos/github/rcarragh/c212"}, {"uid": "github/Juke34/AliNe", "html_url": "https://rseng.github.io/software/repository/github/Juke34/AliNe", "api_url": "https://rseng.github.io/software/api/repos/github/Juke34/AliNe"}, {"uid": "github/jgducoin/galclaim", "html_url": "https://rseng.github.io/software/repository/github/jgducoin/galclaim", "api_url": "https://rseng.github.io/software/api/repos/github/jgducoin/galclaim"}, {"uid": "github/yatiml/yatiml", "html_url": "https://rseng.github.io/software/repository/github/yatiml/yatiml", "api_url": "https://rseng.github.io/software/api/repos/github/yatiml/yatiml"}, {"uid": "github/mantzaris/LMDiskANN.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/LMDiskANN.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/LMDiskANN.jl"}, {"uid": "github/mantzaris/WunDeeDB.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/WunDeeDB.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/WunDeeDB.jl"}, {"uid": "github/mantzaris/BenchmarkDataNLP.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/BenchmarkDataNLP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/BenchmarkDataNLP.jl"}, {"uid": "github/bioexcel/biobb_wf_flexdyn", "html_url": "https://rseng.github.io/software/repository/github/bioexcel/biobb_wf_flexdyn", "api_url": "https://rseng.github.io/software/api/repos/github/bioexcel/biobb_wf_flexdyn"}, {"uid": "github/nevrome/bleiglas", "html_url": "https://rseng.github.io/software/repository/github/nevrome/bleiglas", "api_url": "https://rseng.github.io/software/api/repos/github/nevrome/bleiglas"}, {"uid": "github/FelixKrueger/TrimGalore", "html_url": "https://rseng.github.io/software/repository/github/FelixKrueger/TrimGalore", "api_url": "https://rseng.github.io/software/api/repos/github/FelixKrueger/TrimGalore"}, {"uid": "github/wajidarshad/ESIDE", "html_url": "https://rseng.github.io/software/repository/github/wajidarshad/ESIDE", "api_url": "https://rseng.github.io/software/api/repos/github/wajidarshad/ESIDE"}, {"uid": "github/yi-jia-li/cue", "html_url": "https://rseng.github.io/software/repository/github/yi-jia-li/cue", "api_url": "https://rseng.github.io/software/api/repos/github/yi-jia-li/cue"}, {"uid": "github/LabLaskin/MSIGen", "html_url": "https://rseng.github.io/software/repository/github/LabLaskin/MSIGen", "api_url": "https://rseng.github.io/software/api/repos/github/LabLaskin/MSIGen"}, {"uid": "github/rjtanner/StarburstPy", "html_url": "https://rseng.github.io/software/repository/github/rjtanner/StarburstPy", "api_url": "https://rseng.github.io/software/api/repos/github/rjtanner/StarburstPy"}, {"uid": "github/rreischke/OneCovariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/OneCovariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/OneCovariance"}, {"uid": "github/rreischke/frb_covariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/frb_covariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/frb_covariance"}, {"uid": "github/fair-workflows/nanopub", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/nanopub", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/nanopub"}, {"uid": "github/fair-workflows/NanopubJL", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/NanopubJL", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/NanopubJL"}, {"uid": "github/fair-workflows/fairworkflows", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/fairworkflows", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/fairworkflows"}, {"uid": "github/snijderlab/stitch", "html_url": "https://rseng.github.io/software/repository/github/snijderlab/stitch", "api_url": "https://rseng.github.io/software/api/repos/github/snijderlab/stitch"}, {"uid": "github/baptklein/ATMOSPHERIX_DATA_RED", "html_url": "https://rseng.github.io/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", "api_url": "https://rseng.github.io/software/api/repos/github/baptklein/ATMOSPHERIX_DATA_RED"}, {"uid": "github/OpenBioLink/Explorer", "html_url": "https://rseng.github.io/software/repository/github/OpenBioLink/Explorer", "api_url": "https://rseng.github.io/software/api/repos/github/OpenBioLink/Explorer"}, {"uid": "github/PeterBartram/TES", "html_url": "https://rseng.github.io/software/repository/github/PeterBartram/TES", "api_url": "https://rseng.github.io/software/api/repos/github/PeterBartram/TES"}, {"uid": "github/KIT-MBS/pyREX", "html_url": "https://rseng.github.io/software/repository/github/KIT-MBS/pyREX", "api_url": "https://rseng.github.io/software/api/repos/github/KIT-MBS/pyREX"}, {"uid": "github/CatarinaMMarques/FisherCosmology", "html_url": "https://rseng.github.io/software/repository/github/CatarinaMMarques/FisherCosmology", "api_url": "https://rseng.github.io/software/api/repos/github/CatarinaMMarques/FisherCosmology"}, {"uid": "github/julblarod/SOPHISM", "html_url": "https://rseng.github.io/software/repository/github/julblarod/SOPHISM", "api_url": "https://rseng.github.io/software/api/repos/github/julblarod/SOPHISM"}, {"uid": "github/Midnighter/dependency-info", "html_url": "https://rseng.github.io/software/repository/github/Midnighter/dependency-info", "api_url": "https://rseng.github.io/software/api/repos/github/Midnighter/dependency-info"}, {"uid": "github/epfl-radio-astro/LiSA", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/LiSA", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/LiSA"}, {"uid": "github/epfl-radio-astro/PINION", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/PINION", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/PINION"}, {"uid": "github/deniswerth/cosmoflow", "html_url": "https://rseng.github.io/software/repository/github/deniswerth/cosmoflow", "api_url": "https://rseng.github.io/software/api/repos/github/deniswerth/cosmoflow"}, {"uid": "github/dkn16/H21F", "html_url": "https://rseng.github.io/software/repository/github/dkn16/H21F", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/H21F"}, {"uid": "github/dkn16/Synax", "html_url": "https://rseng.github.io/software/repository/github/dkn16/Synax", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/Synax"}, {"uid": "github/watts-dev/watts", "html_url": "https://rseng.github.io/software/repository/github/watts-dev/watts", "api_url": "https://rseng.github.io/software/api/repos/github/watts-dev/watts"}, {"uid": "github/Beryl-Jingxin/PyExoCross", "html_url": "https://rseng.github.io/software/repository/github/Beryl-Jingxin/PyExoCross", "api_url": "https://rseng.github.io/software/api/repos/github/Beryl-Jingxin/PyExoCross"}, {"uid": "github/ISISNeutronMuon/quickBayes", "html_url": "https://rseng.github.io/software/repository/github/ISISNeutronMuon/quickBayes", "api_url": "https://rseng.github.io/software/api/repos/github/ISISNeutronMuon/quickBayes"}, {"uid": "github/BaroudLab/Griottes", "html_url": "https://rseng.github.io/software/repository/github/BaroudLab/Griottes", "api_url": "https://rseng.github.io/software/api/repos/github/BaroudLab/Griottes"}, {"uid": "github/sidchaini/DistClassiPy", "html_url": "https://rseng.github.io/software/repository/github/sidchaini/DistClassiPy", "api_url": "https://rseng.github.io/software/api/repos/github/sidchaini/DistClassiPy"}, {"uid": "github/OSU-BMBL/IDAM", "html_url": "https://rseng.github.io/software/repository/github/OSU-BMBL/IDAM", "api_url": "https://rseng.github.io/software/api/repos/github/OSU-BMBL/IDAM"}, {"uid": "github/NIFTI-Imaging/nifti_clib", "html_url": "https://rseng.github.io/software/repository/github/NIFTI-Imaging/nifti_clib", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTI-Imaging/nifti_clib"}, {"uid": "github/Via-Appia/via-appia-online-viewer", "html_url": "https://rseng.github.io/software/repository/github/Via-Appia/via-appia-online-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/Via-Appia/via-appia-online-viewer"}, {"uid": "github/blankhaar/PORTAL", "html_url": "https://rseng.github.io/software/repository/github/blankhaar/PORTAL", "api_url": "https://rseng.github.io/software/api/repos/github/blankhaar/PORTAL"}, {"uid": "github/schulze61/RhoPop", "html_url": "https://rseng.github.io/software/repository/github/schulze61/RhoPop", "api_url": "https://rseng.github.io/software/api/repos/github/schulze61/RhoPop"}, {"uid": "github/OncoRNALab/CiLiQuant", "html_url": "https://rseng.github.io/software/repository/github/OncoRNALab/CiLiQuant", "api_url": "https://rseng.github.io/software/api/repos/github/OncoRNALab/CiLiQuant"}, {"uid": "github/CAMI-challenge/CAMITAX", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/CAMITAX", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/CAMITAX"}, {"uid": "github/CAMI-challenge/AMBER", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/AMBER"}, {"uid": "github/tkerscher/blast", "html_url": "https://rseng.github.io/software/repository/github/tkerscher/blast", "api_url": "https://rseng.github.io/software/api/repos/github/tkerscher/blast"}, {"uid": "github/wasserman-group/pyCADMium", "html_url": "https://rseng.github.io/software/repository/github/wasserman-group/pyCADMium", "api_url": "https://rseng.github.io/software/api/repos/github/wasserman-group/pyCADMium"}, {"uid": "github/homerjed/sbgm", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbgm", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbgm"}, {"uid": "github/homerjed/sbiax", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbiax", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbiax"}, {"uid": "github/damar-wicaksono/uqtestfuns", "html_url": "https://rseng.github.io/software/repository/github/damar-wicaksono/uqtestfuns", "api_url": "https://rseng.github.io/software/api/repos/github/damar-wicaksono/uqtestfuns"}, {"uid": "github/rossfadely/star-galaxy-classification", "html_url": "https://rseng.github.io/software/repository/github/rossfadely/star-galaxy-classification", "api_url": "https://rseng.github.io/software/api/repos/github/rossfadely/star-galaxy-classification"}, {"uid": "github/Beuth-Erdelt/DBMS-Benchmarker", "html_url": "https://rseng.github.io/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", "api_url": "https://rseng.github.io/software/api/repos/github/Beuth-Erdelt/DBMS-Benchmarker"}, {"uid": "github/SimCab-CHU/ifCNVR", "html_url": "https://rseng.github.io/software/repository/github/SimCab-CHU/ifCNVR", "api_url": "https://rseng.github.io/software/api/repos/github/SimCab-CHU/ifCNVR"}, {"uid": "github/jts/nanopolish", "html_url": "https://rseng.github.io/software/repository/github/jts/nanopolish", "api_url": "https://rseng.github.io/software/api/repos/github/jts/nanopolish"}, {"uid": "github/jts/sga", "html_url": "https://rseng.github.io/software/repository/github/jts/sga", "api_url": "https://rseng.github.io/software/api/repos/github/jts/sga"}, {"uid": "github/ajshajib/dolphin", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/dolphin"}, {"uid": "github/ajshajib/LensingETC", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/LensingETC", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/LensingETC"}, {"uid": "github/metawards/MetaWards", "html_url": "https://rseng.github.io/software/repository/github/metawards/MetaWards", "api_url": "https://rseng.github.io/software/api/repos/github/metawards/MetaWards"}, {"uid": "github/CompGenomeLab/boquila", "html_url": "https://rseng.github.io/software/repository/github/CompGenomeLab/boquila", "api_url": "https://rseng.github.io/software/api/repos/github/CompGenomeLab/boquila"}, {"uid": "github/LucaMalavolta/CCFpams", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/CCFpams", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/CCFpams"}, {"uid": "github/LucaMalavolta/PyORBIT", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/PyORBIT", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/PyORBIT"}, {"uid": "github/damask-multiphysics/DAMASK", "html_url": "https://rseng.github.io/software/repository/github/damask-multiphysics/DAMASK", "api_url": "https://rseng.github.io/software/api/repos/github/damask-multiphysics/DAMASK"}, {"uid": "github/xxsds/DYNAMIC", "html_url": "https://rseng.github.io/software/repository/github/xxsds/DYNAMIC", "api_url": "https://rseng.github.io/software/api/repos/github/xxsds/DYNAMIC"}, {"uid": "github/jruffio/breads", "html_url": "https://rseng.github.io/software/repository/github/jruffio/breads", "api_url": "https://rseng.github.io/software/api/repos/github/jruffio/breads"}, {"uid": "github/delve-team/delve", "html_url": "https://rseng.github.io/software/repository/github/delve-team/delve", "api_url": "https://rseng.github.io/software/api/repos/github/delve-team/delve"}, {"uid": "github/INCF/one_click", "html_url": "https://rseng.github.io/software/repository/github/INCF/one_click", "api_url": "https://rseng.github.io/software/api/repos/github/INCF/one_click"}, {"uid": "github/Baohua-Chen/GFFx", "html_url": "https://rseng.github.io/software/repository/github/Baohua-Chen/GFFx", "api_url": "https://rseng.github.io/software/api/repos/github/Baohua-Chen/GFFx"}, {"uid": "github/qutip/qutip", "html_url": "https://rseng.github.io/software/repository/github/qutip/qutip", "api_url": "https://rseng.github.io/software/api/repos/github/qutip/qutip"}, {"uid": "github/ExoSim/ExoSimPublic", "html_url": "https://rseng.github.io/software/repository/github/ExoSim/ExoSimPublic", "api_url": "https://rseng.github.io/software/api/repos/github/ExoSim/ExoSimPublic"}, {"uid": "github/PaulKuin/uvotpy", "html_url": "https://rseng.github.io/software/repository/github/PaulKuin/uvotpy", "api_url": "https://rseng.github.io/software/api/repos/github/PaulKuin/uvotpy"}, {"uid": "github/baiyueh/PANINIpy", "html_url": "https://rseng.github.io/software/repository/github/baiyueh/PANINIpy", "api_url": "https://rseng.github.io/software/api/repos/github/baiyueh/PANINIpy"}, {"uid": "github/aothmane-control/Algebraic-differentiators", "html_url": "https://rseng.github.io/software/repository/github/aothmane-control/Algebraic-differentiators", "api_url": "https://rseng.github.io/software/api/repos/github/aothmane-control/Algebraic-differentiators"}, {"uid": "github/AlexMaraio/WeakLensingQML", "html_url": "https://rseng.github.io/software/repository/github/AlexMaraio/WeakLensingQML", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMaraio/WeakLensingQML"}, {"uid": "github/alexandercoulter/fastfrechet", "html_url": "https://rseng.github.io/software/repository/github/alexandercoulter/fastfrechet", "api_url": "https://rseng.github.io/software/api/repos/github/alexandercoulter/fastfrechet"}, {"uid": "github/mlr-org/mcboost", "html_url": "https://rseng.github.io/software/repository/github/mlr-org/mcboost", "api_url": "https://rseng.github.io/software/api/repos/github/mlr-org/mcboost"}, {"uid": "github/KCL-BMEIS/NiftySeg", "html_url": "https://rseng.github.io/software/repository/github/KCL-BMEIS/NiftySeg", "api_url": "https://rseng.github.io/software/api/repos/github/KCL-BMEIS/NiftySeg"}, {"uid": "github/predsci/OFT", "html_url": "https://rseng.github.io/software/repository/github/predsci/OFT", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/OFT"}, {"uid": "github/predsci/hipft", "html_url": "https://rseng.github.io/software/repository/github/predsci/hipft", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/hipft"}, {"uid": "github/joshspeagle/dynesty", "html_url": "https://rseng.github.io/software/repository/github/joshspeagle/dynesty", "api_url": "https://rseng.github.io/software/api/repos/github/joshspeagle/dynesty"}, {"uid": "github/METHODS-Group/DRDMannTurb", "html_url": "https://rseng.github.io/software/repository/github/METHODS-Group/DRDMannTurb", "api_url": "https://rseng.github.io/software/api/repos/github/METHODS-Group/DRDMannTurb"}, {"uid": "github/zclaytor/butterpy", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/butterpy", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/butterpy"}, {"uid": "github/zclaytor/kiauhoku", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/kiauhoku", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/kiauhoku"}, {"uid": "github/stefanoMP/massiveGST", "html_url": "https://rseng.github.io/software/repository/github/stefanoMP/massiveGST", "api_url": "https://rseng.github.io/software/api/repos/github/stefanoMP/massiveGST"}, {"uid": "github/markusbonse/applefy", "html_url": "https://rseng.github.io/software/repository/github/markusbonse/applefy", "api_url": "https://rseng.github.io/software/api/repos/github/markusbonse/applefy"}, {"uid": "github/inpefess/gym-saturation", "html_url": "https://rseng.github.io/software/repository/github/inpefess/gym-saturation", "api_url": "https://rseng.github.io/software/api/repos/github/inpefess/gym-saturation"}, {"uid": "github/masoncarney/stepped_luneburg", "html_url": "https://rseng.github.io/software/repository/github/masoncarney/stepped_luneburg", "api_url": "https://rseng.github.io/software/api/repos/github/masoncarney/stepped_luneburg"}, {"uid": "github/ccsb-scripps/Illustrate", "html_url": "https://rseng.github.io/software/repository/github/ccsb-scripps/Illustrate", "api_url": "https://rseng.github.io/software/api/repos/github/ccsb-scripps/Illustrate"}, {"uid": "github/ComplexGroupInteractions/xgi", "html_url": "https://rseng.github.io/software/repository/github/ComplexGroupInteractions/xgi", "api_url": "https://rseng.github.io/software/api/repos/github/ComplexGroupInteractions/xgi"}, {"uid": "github/karel-brinda/ococo", "html_url": "https://rseng.github.io/software/repository/github/karel-brinda/ococo", "api_url": "https://rseng.github.io/software/api/repos/github/karel-brinda/ococo"}, {"uid": "github/GoelandProver/Goeland", "html_url": "https://rseng.github.io/software/repository/github/GoelandProver/Goeland", "api_url": "https://rseng.github.io/software/api/repos/github/GoelandProver/Goeland"}, {"uid": "github/synchrofit/synchrofit", "html_url": "https://rseng.github.io/software/repository/github/synchrofit/synchrofit", "api_url": "https://rseng.github.io/software/api/repos/github/synchrofit/synchrofit"}, {"uid": "github/cweniger/swordfish", "html_url": "https://rseng.github.io/software/repository/github/cweniger/swordfish", "api_url": "https://rseng.github.io/software/api/repos/github/cweniger/swordfish"}, {"uid": "github/sblunt/orbitize", "html_url": "https://rseng.github.io/software/repository/github/sblunt/orbitize", "api_url": "https://rseng.github.io/software/api/repos/github/sblunt/orbitize"}, {"uid": "github/hveerten/katu", "html_url": "https://rseng.github.io/software/repository/github/hveerten/katu", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/katu"}, {"uid": "github/hveerten/boxfit", "html_url": "https://rseng.github.io/software/repository/github/hveerten/boxfit", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/boxfit"}, {"uid": "github/cheginit/HyRiver", "html_url": "https://rseng.github.io/software/repository/github/cheginit/HyRiver", "api_url": "https://rseng.github.io/software/api/repos/github/cheginit/HyRiver"}, {"uid": "github/jakeown/astroclover", "html_url": "https://rseng.github.io/software/repository/github/jakeown/astroclover", "api_url": "https://rseng.github.io/software/api/repos/github/jakeown/astroclover"}, {"uid": "github/cochran4/GEMB", "html_url": "https://rseng.github.io/software/repository/github/cochran4/GEMB", "api_url": "https://rseng.github.io/software/api/repos/github/cochran4/GEMB"}, {"uid": "github/0satoken/Eclairs", "html_url": "https://rseng.github.io/software/repository/github/0satoken/Eclairs", "api_url": "https://rseng.github.io/software/api/repos/github/0satoken/Eclairs"}, {"uid": "github/gsuissa/hardCORE", "html_url": "https://rseng.github.io/software/repository/github/gsuissa/hardCORE", "api_url": "https://rseng.github.io/software/api/repos/github/gsuissa/hardCORE"}, {"uid": "github/DrJieZheng/meanoffset", "html_url": "https://rseng.github.io/software/repository/github/DrJieZheng/meanoffset", "api_url": "https://rseng.github.io/software/api/repos/github/DrJieZheng/meanoffset"}, {"uid": "github/phirling/pyc2ray", "html_url": "https://rseng.github.io/software/repository/github/phirling/pyc2ray", "api_url": "https://rseng.github.io/software/api/repos/github/phirling/pyc2ray"}, {"uid": "github/AP6YC/AdaptiveResonance.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/AdaptiveResonance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/AdaptiveResonance.jl"}, {"uid": "github/AP6YC/ClusterValidityIndices.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/ClusterValidityIndices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/ClusterValidityIndices.jl"}, {"uid": "github/ArtRand/signalAlign", "html_url": "https://rseng.github.io/software/repository/github/ArtRand/signalAlign", "api_url": "https://rseng.github.io/software/api/repos/github/ArtRand/signalAlign"}, {"uid": "github/ycwu1030/EvoEMD", "html_url": "https://rseng.github.io/software/repository/github/ycwu1030/EvoEMD", "api_url": "https://rseng.github.io/software/api/repos/github/ycwu1030/EvoEMD"}, {"uid": "github/lantunes/cellpylib", "html_url": "https://rseng.github.io/software/repository/github/lantunes/cellpylib", "api_url": "https://rseng.github.io/software/api/repos/github/lantunes/cellpylib"}, {"uid": "github/AlexanderJuestel/pyheatdemand", "html_url": "https://rseng.github.io/software/repository/github/AlexanderJuestel/pyheatdemand", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderJuestel/pyheatdemand"}, {"uid": "github/Aravind-Sundararajan/MocoExtendProblem", "html_url": "https://rseng.github.io/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", "api_url": "https://rseng.github.io/software/api/repos/github/Aravind-Sundararajan/MocoExtendProblem"}, {"uid": "github/sjbeckett/localcovid19now", "html_url": "https://rseng.github.io/software/repository/github/sjbeckett/localcovid19now", "api_url": "https://rseng.github.io/software/api/repos/github/sjbeckett/localcovid19now"}, {"uid": "github/graphnet-team/graphnet", "html_url": "https://rseng.github.io/software/repository/github/graphnet-team/graphnet", "api_url": "https://rseng.github.io/software/api/repos/github/graphnet-team/graphnet"}, {"uid": "github/sims-lab/CapCruncher", "html_url": "https://rseng.github.io/software/repository/github/sims-lab/CapCruncher", "api_url": "https://rseng.github.io/software/api/repos/github/sims-lab/CapCruncher"}, {"uid": "github/biolab-unige/nifti2dicom", "html_url": "https://rseng.github.io/software/repository/github/biolab-unige/nifti2dicom", "api_url": "https://rseng.github.io/software/api/repos/github/biolab-unige/nifti2dicom"}, {"uid": "github/rkingsbury/pyEQL", "html_url": "https://rseng.github.io/software/repository/github/rkingsbury/pyEQL", "api_url": "https://rseng.github.io/software/api/repos/github/rkingsbury/pyEQL"}, {"uid": "github/devsim/devsim", "html_url": "https://rseng.github.io/software/repository/github/devsim/devsim", "api_url": "https://rseng.github.io/software/api/repos/github/devsim/devsim"}, {"uid": "github/aringlis/afino_release_version", "html_url": "https://rseng.github.io/software/repository/github/aringlis/afino_release_version", "api_url": "https://rseng.github.io/software/api/repos/github/aringlis/afino_release_version"}, {"uid": "github/pymatting/pymatting", "html_url": "https://rseng.github.io/software/repository/github/pymatting/pymatting", "api_url": "https://rseng.github.io/software/api/repos/github/pymatting/pymatting"}, {"uid": "github/AgentM-GEG/residual_feature_extraction", "html_url": "https://rseng.github.io/software/repository/github/AgentM-GEG/residual_feature_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/AgentM-GEG/residual_feature_extraction"}, {"uid": "github/mecobpsu/bacseq", "html_url": "https://rseng.github.io/software/repository/github/mecobpsu/bacseq", "api_url": "https://rseng.github.io/software/api/repos/github/mecobpsu/bacseq"}, {"uid": "github/astrocaroline/opacity-wizard", "html_url": "https://rseng.github.io/software/repository/github/astrocaroline/opacity-wizard", "api_url": "https://rseng.github.io/software/api/repos/github/astrocaroline/opacity-wizard"}, {"uid": "github/wadpac/GGIR", "html_url": "https://rseng.github.io/software/repository/github/wadpac/GGIR", "api_url": "https://rseng.github.io/software/api/repos/github/wadpac/GGIR"}, {"uid": "github/Kingsford-Group/scallop", "html_url": "https://rseng.github.io/software/repository/github/Kingsford-Group/scallop", "api_url": "https://rseng.github.io/software/api/repos/github/Kingsford-Group/scallop"}, {"uid": "github/ethz-randomwalk/polytopewalk", "html_url": "https://rseng.github.io/software/repository/github/ethz-randomwalk/polytopewalk", "api_url": "https://rseng.github.io/software/api/repos/github/ethz-randomwalk/polytopewalk"}, {"uid": "github/souzamonteiro/cnatool", "html_url": "https://rseng.github.io/software/repository/github/souzamonteiro/cnatool", "api_url": "https://rseng.github.io/software/api/repos/github/souzamonteiro/cnatool"}, {"uid": "github/UU-ER/AdOpT-NET0", "html_url": "https://rseng.github.io/software/repository/github/UU-ER/AdOpT-NET0", "api_url": "https://rseng.github.io/software/api/repos/github/UU-ER/AdOpT-NET0"}, {"uid": "github/stillwater-sc/universal", "html_url": "https://rseng.github.io/software/repository/github/stillwater-sc/universal", "api_url": "https://rseng.github.io/software/api/repos/github/stillwater-sc/universal"}, {"uid": "github/aranyics/ReDCM", "html_url": "https://rseng.github.io/software/repository/github/aranyics/ReDCM", "api_url": "https://rseng.github.io/software/api/repos/github/aranyics/ReDCM"}, {"uid": "github/spjuhel/BoARIO", "html_url": "https://rseng.github.io/software/repository/github/spjuhel/BoARIO", "api_url": "https://rseng.github.io/software/api/repos/github/spjuhel/BoARIO"}, {"uid": "github/PanKonstantinos/MEvA-X", "html_url": "https://rseng.github.io/software/repository/github/PanKonstantinos/MEvA-X", "api_url": "https://rseng.github.io/software/api/repos/github/PanKonstantinos/MEvA-X"}, {"uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "html_url": "https://rseng.github.io/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "api_url": "https://rseng.github.io/software/api/repos/github/bengeof/QPoweredCompound2DeNovoDrugPropMax"}, {"uid": "github/nextstrain/auspice", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/auspice", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/auspice"}, {"uid": "github/nextstrain/augur", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/augur", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/augur"}, {"uid": "github/nextstrain/nextclade", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/nextclade", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/nextclade"}, {"uid": "github/JamesPaynter/PyGRB", "html_url": "https://rseng.github.io/software/repository/github/JamesPaynter/PyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/JamesPaynter/PyGRB"}, {"uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "html_url": "https://rseng.github.io/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "api_url": "https://rseng.github.io/software/api/repos/github/NCAR/NCAR-Classic-Libraries-for-Geophysics"}, {"uid": "github/ZhaiLab-SUSTech/FLEPSeq", "html_url": "https://rseng.github.io/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaiLab-SUSTech/FLEPSeq"}, {"uid": "github/m-dadej/MarSwitching.jl", "html_url": "https://rseng.github.io/software/repository/github/m-dadej/MarSwitching.jl", "api_url": "https://rseng.github.io/software/api/repos/github/m-dadej/MarSwitching.jl"}, {"uid": "github/David-McKenna/udpPacketManager", "html_url": "https://rseng.github.io/software/repository/github/David-McKenna/udpPacketManager", "api_url": "https://rseng.github.io/software/api/repos/github/David-McKenna/udpPacketManager"}, {"uid": "github/NERDSITU/superblockify", "html_url": "https://rseng.github.io/software/repository/github/NERDSITU/superblockify", "api_url": "https://rseng.github.io/software/api/repos/github/NERDSITU/superblockify"}, {"uid": "github/VincentAlcazer/StatAid", "html_url": "https://rseng.github.io/software/repository/github/VincentAlcazer/StatAid", "api_url": "https://rseng.github.io/software/api/repos/github/VincentAlcazer/StatAid"}, {"uid": "github/BackmanLab/PWSpy", "html_url": "https://rseng.github.io/software/repository/github/BackmanLab/PWSpy", "api_url": "https://rseng.github.io/software/api/repos/github/BackmanLab/PWSpy"}, {"uid": "github/onsala-space-observatory/astromorph", "html_url": "https://rseng.github.io/software/repository/github/onsala-space-observatory/astromorph", "api_url": "https://rseng.github.io/software/api/repos/github/onsala-space-observatory/astromorph"}, {"uid": "github/csj607/STaRS", "html_url": "https://rseng.github.io/software/repository/github/csj607/STaRS", "api_url": "https://rseng.github.io/software/api/repos/github/csj607/STaRS"}, {"uid": "github/bcbio/bcbio.variation.recall", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio.variation.recall", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio.variation.recall"}, {"uid": "github/bcbio/bcbio-nextgen", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio-nextgen", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio-nextgen"}, {"uid": "github/abinit/abinit", "html_url": "https://rseng.github.io/software/repository/github/abinit/abinit", "api_url": "https://rseng.github.io/software/api/repos/github/abinit/abinit"}, {"uid": "github/JensUweUlrich/ReadBouncer", "html_url": "https://rseng.github.io/software/repository/github/JensUweUlrich/ReadBouncer", "api_url": "https://rseng.github.io/software/api/repos/github/JensUweUlrich/ReadBouncer"}, {"uid": "github/aertslab/pySCENIC", "html_url": "https://rseng.github.io/software/repository/github/aertslab/pySCENIC", "api_url": "https://rseng.github.io/software/api/repos/github/aertslab/pySCENIC"}, {"uid": "github/BleekerLab/PhenoFeatureFinder", "html_url": "https://rseng.github.io/software/repository/github/BleekerLab/PhenoFeatureFinder", "api_url": "https://rseng.github.io/software/api/repos/github/BleekerLab/PhenoFeatureFinder"}, {"uid": "github/mbhall88/rasusa", "html_url": "https://rseng.github.io/software/repository/github/mbhall88/rasusa", "api_url": "https://rseng.github.io/software/api/repos/github/mbhall88/rasusa"}, {"uid": "github/AstroChem/VISIBLE", "html_url": "https://rseng.github.io/software/repository/github/AstroChem/VISIBLE", "api_url": "https://rseng.github.io/software/api/repos/github/AstroChem/VISIBLE"}, {"uid": "github/latrop/DECA", "html_url": "https://rseng.github.io/software/repository/github/latrop/DECA", "api_url": "https://rseng.github.io/software/api/repos/github/latrop/DECA"}, {"uid": "github/inab/trimal", "html_url": "https://rseng.github.io/software/repository/github/inab/trimal", "api_url": "https://rseng.github.io/software/api/repos/github/inab/trimal"}, {"uid": "github/Varnani/pywd2015-qt5", "html_url": "https://rseng.github.io/software/repository/github/Varnani/pywd2015-qt5", "api_url": "https://rseng.github.io/software/api/repos/github/Varnani/pywd2015-qt5"}, {"uid": "github/birnstiel/two-pop-py", "html_url": "https://rseng.github.io/software/repository/github/birnstiel/two-pop-py", "api_url": "https://rseng.github.io/software/api/repos/github/birnstiel/two-pop-py"}, {"uid": "github/polca/pathways", "html_url": "https://rseng.github.io/software/repository/github/polca/pathways", "api_url": "https://rseng.github.io/software/api/repos/github/polca/pathways"}, {"uid": "github/polca/unfold", "html_url": "https://rseng.github.io/software/repository/github/polca/unfold", "api_url": "https://rseng.github.io/software/api/repos/github/polca/unfold"}, {"uid": "github/jstuecker/adiabatic-tides", "html_url": "https://rseng.github.io/software/repository/github/jstuecker/adiabatic-tides", "api_url": "https://rseng.github.io/software/api/repos/github/jstuecker/adiabatic-tides"}, {"uid": "github/veg/hivtrace", "html_url": "https://rseng.github.io/software/repository/github/veg/hivtrace", "api_url": "https://rseng.github.io/software/api/repos/github/veg/hivtrace"}, {"uid": "github/veg/tn93", "html_url": "https://rseng.github.io/software/repository/github/veg/tn93", "api_url": "https://rseng.github.io/software/api/repos/github/veg/tn93"}, {"uid": "github/Weeks-UNC/RingMapper", "html_url": "https://rseng.github.io/software/repository/github/Weeks-UNC/RingMapper", "api_url": "https://rseng.github.io/software/api/repos/github/Weeks-UNC/RingMapper"}, {"uid": "github/VChristiaens/special", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/special", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/special"}, {"uid": "github/VChristiaens/MINDS", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/MINDS", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/MINDS"}, {"uid": "github/VChristiaens/vcal_sphere", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/vcal_sphere", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/vcal_sphere"}, {"uid": "github/medvedevgroup/varmatch", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/varmatch", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/varmatch"}, {"uid": "github/medvedevgroup/TwoPaCo", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/TwoPaCo", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/TwoPaCo"}, {"uid": "github/konkolyseismolab/seismolab", "html_url": "https://rseng.github.io/software/repository/github/konkolyseismolab/seismolab", "api_url": "https://rseng.github.io/software/api/repos/github/konkolyseismolab/seismolab"}, {"uid": "github/nach00gar/16SMicrobiomeMLFS", "html_url": "https://rseng.github.io/software/repository/github/nach00gar/16SMicrobiomeMLFS", "api_url": "https://rseng.github.io/software/api/repos/github/nach00gar/16SMicrobiomeMLFS"}, {"uid": "github/jiangyuts/facetclumps", "html_url": "https://rseng.github.io/software/repository/github/jiangyuts/facetclumps", "api_url": "https://rseng.github.io/software/api/repos/github/jiangyuts/facetclumps"}, {"uid": "github/fritzsedlazeck/Sniffles", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/Sniffles", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/Sniffles"}, {"uid": "github/fritzsedlazeck/SURVIVOR", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/SURVIVOR", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/SURVIVOR"}, {"uid": "github/maps-as-data/MapReader", "html_url": "https://rseng.github.io/software/repository/github/maps-as-data/MapReader", "api_url": "https://rseng.github.io/software/api/repos/github/maps-as-data/MapReader"}, {"uid": "github/spinicist/riesling", "html_url": "https://rseng.github.io/software/repository/github/spinicist/riesling", "api_url": "https://rseng.github.io/software/api/repos/github/spinicist/riesling"}, {"uid": "github/AA-ALERT/frbcatdb", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcatdb", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcatdb"}, {"uid": "github/AA-ALERT/Dedispersion", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/Dedispersion", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/Dedispersion"}, {"uid": "github/AA-ALERT/AstroData", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AstroData", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AstroData"}, {"uid": "github/AA-ALERT/AMBER", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AMBER"}, {"uid": "github/AA-ALERT/frbcat-web", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcat-web", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcat-web"}, {"uid": "github/hpc-maths/samurai", "html_url": "https://rseng.github.io/software/repository/github/hpc-maths/samurai", "api_url": "https://rseng.github.io/software/api/repos/github/hpc-maths/samurai"}, {"uid": "github/ndaniyar/aphot", "html_url": "https://rseng.github.io/software/repository/github/ndaniyar/aphot", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniyar/aphot"}, {"uid": "github/KostasValeckas/PyLongslit", "html_url": "https://rseng.github.io/software/repository/github/KostasValeckas/PyLongslit", "api_url": "https://rseng.github.io/software/api/repos/github/KostasValeckas/PyLongslit"}, {"uid": "github/tberlok/paicos", "html_url": "https://rseng.github.io/software/repository/github/tberlok/paicos", "api_url": "https://rseng.github.io/software/api/repos/github/tberlok/paicos"}, {"uid": "github/Arpitk1001/RotCurveTool", "html_url": "https://rseng.github.io/software/repository/github/Arpitk1001/RotCurveTool", "api_url": "https://rseng.github.io/software/api/repos/github/Arpitk1001/RotCurveTool"}, {"uid": "github/zengzhenhuan/GFNet", "html_url": "https://rseng.github.io/software/repository/github/zengzhenhuan/GFNet", "api_url": "https://rseng.github.io/software/api/repos/github/zengzhenhuan/GFNet"}, {"uid": "github/aalhossary/pyemgpipeline", "html_url": "https://rseng.github.io/software/repository/github/aalhossary/pyemgpipeline", "api_url": "https://rseng.github.io/software/api/repos/github/aalhossary/pyemgpipeline"}, {"uid": "github/reproducible-biomedical-modeling/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/reproducible-biomedical-modeling/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/reproducible-biomedical-modeling/Biosimulations"}, {"uid": "github/carnotresearch/cr-sparse", "html_url": "https://rseng.github.io/software/repository/github/carnotresearch/cr-sparse", "api_url": "https://rseng.github.io/software/api/repos/github/carnotresearch/cr-sparse"}, {"uid": "github/a8864666-rgb/fgoc", "html_url": "https://rseng.github.io/software/repository/github/a8864666-rgb/fgoc", "api_url": "https://rseng.github.io/software/api/repos/github/a8864666-rgb/fgoc"}, {"uid": "github/auctus-team/pycapacity", "html_url": "https://rseng.github.io/software/repository/github/auctus-team/pycapacity", "api_url": "https://rseng.github.io/software/api/repos/github/auctus-team/pycapacity"}, {"uid": "github/AstraZeneca/kallisto", "html_url": "https://rseng.github.io/software/repository/github/AstraZeneca/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/AstraZeneca/kallisto"}, {"uid": "github/byuflowlab/GXBeam.jl", "html_url": "https://rseng.github.io/software/repository/github/byuflowlab/GXBeam.jl", "api_url": "https://rseng.github.io/software/api/repos/github/byuflowlab/GXBeam.jl"}, {"uid": "github/dipol-uf/DIPOL-UF", "html_url": "https://rseng.github.io/software/repository/github/dipol-uf/DIPOL-UF", "api_url": "https://rseng.github.io/software/api/repos/github/dipol-uf/DIPOL-UF"}, {"uid": "github/wanpinglee/MOSAIK", "html_url": "https://rseng.github.io/software/repository/github/wanpinglee/MOSAIK", "api_url": "https://rseng.github.io/software/api/repos/github/wanpinglee/MOSAIK"}, {"uid": "github/AlexMikes/AutoFunc", "html_url": "https://rseng.github.io/software/repository/github/AlexMikes/AutoFunc", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMikes/AutoFunc"}, {"uid": "github/HUST-NingKang-Lab/ONN4MST", "html_url": "https://rseng.github.io/software/repository/github/HUST-NingKang-Lab/ONN4MST", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-NingKang-Lab/ONN4MST"}, {"uid": "github/henrysky/astroNN", "html_url": "https://rseng.github.io/software/repository/github/henrysky/astroNN", "api_url": "https://rseng.github.io/software/api/repos/github/henrysky/astroNN"}, {"uid": "github/mattpitkin/lintegrate", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/lintegrate", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/lintegrate"}, {"uid": "github/mattpitkin/psrqpy", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/psrqpy", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/psrqpy"}, {"uid": "github/koide3/small_gicp", "html_url": "https://rseng.github.io/software/repository/github/koide3/small_gicp", "api_url": "https://rseng.github.io/software/api/repos/github/koide3/small_gicp"}, {"uid": "github/h3abionet/genesis2", "html_url": "https://rseng.github.io/software/repository/github/h3abionet/genesis2", "api_url": "https://rseng.github.io/software/api/repos/github/h3abionet/genesis2"}, {"uid": "github/johnschwenck/bp", "html_url": "https://rseng.github.io/software/repository/github/johnschwenck/bp", "api_url": "https://rseng.github.io/software/api/repos/github/johnschwenck/bp"}, {"uid": "github/mahulchak/quickmerge", "html_url": "https://rseng.github.io/software/repository/github/mahulchak/quickmerge", "api_url": "https://rseng.github.io/software/api/repos/github/mahulchak/quickmerge"}, {"uid": "github/oncoray/mirp", "html_url": "https://rseng.github.io/software/repository/github/oncoray/mirp", "api_url": "https://rseng.github.io/software/api/repos/github/oncoray/mirp"}, {"uid": "github/nanakiksc/zerone", "html_url": "https://rseng.github.io/software/repository/github/nanakiksc/zerone", "api_url": "https://rseng.github.io/software/api/repos/github/nanakiksc/zerone"}, {"uid": "github/paulbrodersen/netgraph", "html_url": "https://rseng.github.io/software/repository/github/paulbrodersen/netgraph", "api_url": "https://rseng.github.io/software/api/repos/github/paulbrodersen/netgraph"}, {"uid": "github/ahudde/greeks", "html_url": "https://rseng.github.io/software/repository/github/ahudde/greeks", "api_url": "https://rseng.github.io/software/api/repos/github/ahudde/greeks"}, {"uid": "github/will-rowe/hulk", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/hulk", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/hulk"}, {"uid": "github/will-rowe/groot", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/groot", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/groot"}, {"uid": "github/daniel-muthukrishna/astrodash", "html_url": "https://rseng.github.io/software/repository/github/daniel-muthukrishna/astrodash", "api_url": "https://rseng.github.io/software/api/repos/github/daniel-muthukrishna/astrodash"}, {"uid": "github/qcxms/QCxMS", "html_url": "https://rseng.github.io/software/repository/github/qcxms/QCxMS", "api_url": "https://rseng.github.io/software/api/repos/github/qcxms/QCxMS"}, {"uid": "github/OpenGene/fastplong", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastplong", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastplong"}, {"uid": "github/OpenGene/fastv", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastv", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastv"}, {"uid": "github/OpenGene/fastp", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastp", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastp"}, {"uid": "github/OpenGene/repaq", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/repaq", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/repaq"}, {"uid": "github/mingzehuang/latentcor", "html_url": "https://rseng.github.io/software/repository/github/mingzehuang/latentcor", "api_url": "https://rseng.github.io/software/api/repos/github/mingzehuang/latentcor"}, {"uid": "github/temken/obscura", "html_url": "https://rseng.github.io/software/repository/github/temken/obscura", "api_url": "https://rseng.github.io/software/api/repos/github/temken/obscura"}, {"uid": "github/temken/DaMaSCUS", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS"}, {"uid": "github/temken/Dirac_vs_Majorana", "html_url": "https://rseng.github.io/software/repository/github/temken/Dirac_vs_Majorana", "api_url": "https://rseng.github.io/software/api/repos/github/temken/Dirac_vs_Majorana"}, {"uid": "github/temken/DaMaSCUS-CRUST", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-CRUST", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-CRUST"}, {"uid": "github/temken/DaMaSCUS-SUN", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-SUN", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-SUN"}, {"uid": "github/temken/DarkARC", "html_url": "https://rseng.github.io/software/repository/github/temken/DarkARC", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DarkARC"}, {"uid": "github/jls713/tact", "html_url": "https://rseng.github.io/software/repository/github/jls713/tact", "api_url": "https://rseng.github.io/software/api/repos/github/jls713/tact"}, {"uid": "github/UBC-Astrophysics/kd-match", "html_url": "https://rseng.github.io/software/repository/github/UBC-Astrophysics/kd-match", "api_url": "https://rseng.github.io/software/api/repos/github/UBC-Astrophysics/kd-match"}, {"uid": "github/biocore-ntnu/pyranges", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/pyranges", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/pyranges"}, {"uid": "github/biocore-ntnu/ncls", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/ncls", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/ncls"}, {"uid": "github/biocore-ntnu/epic2", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/epic2", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/epic2"}, {"uid": "github/mrirecon/view", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/view", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/view"}, {"uid": "github/mrirecon/bart", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/bart", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/bart"}, {"uid": "github/eabaron/synow", "html_url": "https://rseng.github.io/software/repository/github/eabaron/synow", "api_url": "https://rseng.github.io/software/api/repos/github/eabaron/synow"}, {"uid": "github/david-mathews-1994/deltarice", "html_url": "https://rseng.github.io/software/repository/github/david-mathews-1994/deltarice", "api_url": "https://rseng.github.io/software/api/repos/github/david-mathews-1994/deltarice"}, {"uid": "github/metagenlab/assembly_finder", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/assembly_finder", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/assembly_finder"}, {"uid": "github/metagenlab/MeSS", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/MeSS", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/MeSS"}, {"uid": "github/david-bogdan-r/ARTEMIS", "html_url": "https://rseng.github.io/software/repository/github/david-bogdan-r/ARTEMIS", "api_url": "https://rseng.github.io/software/api/repos/github/david-bogdan-r/ARTEMIS"}, {"uid": "github/bblodfon/emba", "html_url": "https://rseng.github.io/software/repository/github/bblodfon/emba", "api_url": "https://rseng.github.io/software/api/repos/github/bblodfon/emba"}, {"uid": "github/krober10nd/SeismicMesh", "html_url": "https://rseng.github.io/software/repository/github/krober10nd/SeismicMesh", "api_url": "https://rseng.github.io/software/api/repos/github/krober10nd/SeismicMesh"}, {"uid": "github/gtonkinhill/fastbaps", "html_url": "https://rseng.github.io/software/repository/github/gtonkinhill/fastbaps", "api_url": "https://rseng.github.io/software/api/repos/github/gtonkinhill/fastbaps"}, {"uid": "github/christopherlovell/sengi", "html_url": "https://rseng.github.io/software/repository/github/christopherlovell/sengi", "api_url": "https://rseng.github.io/software/api/repos/github/christopherlovell/sengi"}, {"uid": "github/Ramialison-Lab-ARMI/3DCardiomics", "html_url": "https://rseng.github.io/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", "api_url": "https://rseng.github.io/software/api/repos/github/Ramialison-Lab-ARMI/3DCardiomics"}, {"uid": "github/p-slash/qsonic", "html_url": "https://rseng.github.io/software/repository/github/p-slash/qsonic", "api_url": "https://rseng.github.io/software/api/repos/github/p-slash/qsonic"}, {"uid": "github/susiegriggo/Phynteny_transformer", "html_url": "https://rseng.github.io/software/repository/github/susiegriggo/Phynteny_transformer", "api_url": "https://rseng.github.io/software/api/repos/github/susiegriggo/Phynteny_transformer"}, {"uid": "github/jranalli/solartoolbox", "html_url": "https://rseng.github.io/software/repository/github/jranalli/solartoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/jranalli/solartoolbox"}, {"uid": "github/biboyd/SALSA", "html_url": "https://rseng.github.io/software/repository/github/biboyd/SALSA", "api_url": "https://rseng.github.io/software/api/repos/github/biboyd/SALSA"}, {"uid": "github/mpc-bioinformatics/CalibraCurve", "html_url": "https://rseng.github.io/software/repository/github/mpc-bioinformatics/CalibraCurve", "api_url": "https://rseng.github.io/software/api/repos/github/mpc-bioinformatics/CalibraCurve"}, {"uid": "github/PetervanLunteren/EcoAssist", "html_url": "https://rseng.github.io/software/repository/github/PetervanLunteren/EcoAssist", "api_url": "https://rseng.github.io/software/api/repos/github/PetervanLunteren/EcoAssist"}, {"uid": "github/sorenwacker/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/sorenwacker/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/sorenwacker/ProteomicsQC"}, {"uid": "github/vembrane/vembrane", "html_url": "https://rseng.github.io/software/repository/github/vembrane/vembrane", "api_url": "https://rseng.github.io/software/api/repos/github/vembrane/vembrane"}, {"uid": "github/lh3/bioawk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bioawk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bioawk"}, {"uid": "github/lh3/minimap2", "html_url": "https://rseng.github.io/software/repository/github/lh3/minimap2", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/minimap2"}, {"uid": "github/lh3/wgsim", "html_url": "https://rseng.github.io/software/repository/github/lh3/wgsim", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/wgsim"}, {"uid": "github/lh3/bgt", "html_url": "https://rseng.github.io/software/repository/github/lh3/bgt", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bgt"}, {"uid": "github/lh3/seqtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/seqtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/seqtk"}, {"uid": "github/lh3/miniasm", "html_url": "https://rseng.github.io/software/repository/github/lh3/miniasm", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/miniasm"}, {"uid": "github/lh3/fermi-lite", "html_url": "https://rseng.github.io/software/repository/github/lh3/fermi-lite", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/fermi-lite"}, {"uid": "github/lh3/bfc", "html_url": "https://rseng.github.io/software/repository/github/lh3/bfc", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bfc"}, {"uid": "github/lh3/bedtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bedtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bedtk"}, {"uid": "github/XSLiuLab/Seq2Neo", "html_url": "https://rseng.github.io/software/repository/github/XSLiuLab/Seq2Neo", "api_url": "https://rseng.github.io/software/api/repos/github/XSLiuLab/Seq2Neo"}, {"uid": "github/MaceKuailv/seaduck", "html_url": "https://rseng.github.io/software/repository/github/MaceKuailv/seaduck", "api_url": "https://rseng.github.io/software/api/repos/github/MaceKuailv/seaduck"}, {"uid": "github/tpapp/MCMCDiagnostics.jl", "html_url": "https://rseng.github.io/software/repository/github/tpapp/MCMCDiagnostics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tpapp/MCMCDiagnostics.jl"}, {"uid": "github/afukushima/DiffCorr", "html_url": "https://rseng.github.io/software/repository/github/afukushima/DiffCorr", "api_url": "https://rseng.github.io/software/api/repos/github/afukushima/DiffCorr"}, {"uid": "github/ReGIS-org/regis-v2", "html_url": "https://rseng.github.io/software/repository/github/ReGIS-org/regis-v2", "api_url": "https://rseng.github.io/software/api/repos/github/ReGIS-org/regis-v2"}, {"uid": "github/ArgoCanada/argodata", "html_url": "https://rseng.github.io/software/repository/github/ArgoCanada/argodata", "api_url": "https://rseng.github.io/software/api/repos/github/ArgoCanada/argodata"}, {"uid": "github/Samreay/Marz", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Marz", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Marz"}, {"uid": "github/Samreay/Barry", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Barry", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Barry"}, {"uid": "github/Samreay/ChainConsumer", "html_url": "https://rseng.github.io/software/repository/github/Samreay/ChainConsumer", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/ChainConsumer"}, {"uid": "github/tensorly/viz", "html_url": "https://rseng.github.io/software/repository/github/tensorly/viz", "api_url": "https://rseng.github.io/software/api/repos/github/tensorly/viz"}, {"uid": "github/actris-cloudnet/mwrpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/mwrpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/mwrpy"}, {"uid": "github/actris-cloudnet/cloudnetpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/cloudnetpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/cloudnetpy"}, {"uid": "github/hanyue36/nanoplexer", "html_url": "https://rseng.github.io/software/repository/github/hanyue36/nanoplexer", "api_url": "https://rseng.github.io/software/api/repos/github/hanyue36/nanoplexer"}, {"uid": "github/FaaSr/FaaSr-package", "html_url": "https://rseng.github.io/software/repository/github/FaaSr/FaaSr-package", "api_url": "https://rseng.github.io/software/api/repos/github/FaaSr/FaaSr-package"}, {"uid": "github/ThibaultFillion/strengths", "html_url": "https://rseng.github.io/software/repository/github/ThibaultFillion/strengths", "api_url": "https://rseng.github.io/software/api/repos/github/ThibaultFillion/strengths"}, {"uid": "github/r-spatial/rgee", "html_url": "https://rseng.github.io/software/repository/github/r-spatial/rgee", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatial/rgee"}, {"uid": "github/beebdev/HARU", "html_url": "https://rseng.github.io/software/repository/github/beebdev/HARU", "api_url": "https://rseng.github.io/software/api/repos/github/beebdev/HARU"}, {"uid": "github/plotly/dash", "html_url": "https://rseng.github.io/software/repository/github/plotly/dash", "api_url": "https://rseng.github.io/software/api/repos/github/plotly/dash"}, {"uid": "github/danielhuson/jloda", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/jloda", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/jloda"}, {"uid": "github/danielhuson/malt", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/malt", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/malt"}, {"uid": "github/danielhuson/dendroscope3", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/dendroscope3", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/dendroscope3"}, {"uid": "github/danielhuson/megan-ce", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/megan-ce", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/megan-ce"}, {"uid": "github/GalacticDynamics-Oxford/Agama", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics-Oxford/Agama", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics-Oxford/Agama"}, {"uid": "github/0xCoto/Virgo", "html_url": "https://rseng.github.io/software/repository/github/0xCoto/Virgo", "api_url": "https://rseng.github.io/software/api/repos/github/0xCoto/Virgo"}, {"uid": "github/annajenul/UBayFS", "html_url": "https://rseng.github.io/software/repository/github/annajenul/UBayFS", "api_url": "https://rseng.github.io/software/api/repos/github/annajenul/UBayFS"}, {"uid": "github/benedictpaten/marginPhase", "html_url": "https://rseng.github.io/software/repository/github/benedictpaten/marginPhase", "api_url": "https://rseng.github.io/software/api/repos/github/benedictpaten/marginPhase"}, {"uid": "github/SysBioUAB/hpi_predictor", "html_url": "https://rseng.github.io/software/repository/github/SysBioUAB/hpi_predictor", "api_url": "https://rseng.github.io/software/api/repos/github/SysBioUAB/hpi_predictor"}, {"uid": "github/Basvanstein/GSAreport", "html_url": "https://rseng.github.io/software/repository/github/Basvanstein/GSAreport", "api_url": "https://rseng.github.io/software/api/repos/github/Basvanstein/GSAreport"}, {"uid": "github/yuguangchen1/KcwiKit", "html_url": "https://rseng.github.io/software/repository/github/yuguangchen1/KcwiKit", "api_url": "https://rseng.github.io/software/api/repos/github/yuguangchen1/KcwiKit"}, {"uid": "github/cschreib/egg", "html_url": "https://rseng.github.io/software/repository/github/cschreib/egg", "api_url": "https://rseng.github.io/software/api/repos/github/cschreib/egg"}, {"uid": "github/ofionnad/radiowinds", "html_url": "https://rseng.github.io/software/repository/github/ofionnad/radiowinds", "api_url": "https://rseng.github.io/software/api/repos/github/ofionnad/radiowinds"}, {"uid": "github/phpuech/OT_Analysis", "html_url": "https://rseng.github.io/software/repository/github/phpuech/OT_Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phpuech/OT_Analysis"}, {"uid": "github/maize-genetics/rTASSEL", "html_url": "https://rseng.github.io/software/repository/github/maize-genetics/rTASSEL", "api_url": "https://rseng.github.io/software/api/repos/github/maize-genetics/rTASSEL"}, {"uid": "github/andr1976/HydDown", "html_url": "https://rseng.github.io/software/repository/github/andr1976/HydDown", "api_url": "https://rseng.github.io/software/api/repos/github/andr1976/HydDown"}, {"uid": "github/Valar-hub/MMLPhoto-z", "html_url": "https://rseng.github.io/software/repository/github/Valar-hub/MMLPhoto-z", "api_url": "https://rseng.github.io/software/api/repos/github/Valar-hub/MMLPhoto-z"}, {"uid": "github/lucianolorenti/ceruleo", "html_url": "https://rseng.github.io/software/repository/github/lucianolorenti/ceruleo", "api_url": "https://rseng.github.io/software/api/repos/github/lucianolorenti/ceruleo"}, {"uid": "github/YihanWangAstro/SpaceHub", "html_url": "https://rseng.github.io/software/repository/github/YihanWangAstro/SpaceHub", "api_url": "https://rseng.github.io/software/api/repos/github/YihanWangAstro/SpaceHub"}, {"uid": "github/winger/hawking_net", "html_url": "https://rseng.github.io/software/repository/github/winger/hawking_net", "api_url": "https://rseng.github.io/software/api/repos/github/winger/hawking_net"}, {"uid": "github/mnets/pymnet", "html_url": "https://rseng.github.io/software/repository/github/mnets/pymnet", "api_url": "https://rseng.github.io/software/api/repos/github/mnets/pymnet"}, {"uid": "github/jpober/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/jpober/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/jpober/21cmSense"}, {"uid": "github/rpoleski/MulensModel", "html_url": "https://rseng.github.io/software/repository/github/rpoleski/MulensModel", "api_url": "https://rseng.github.io/software/api/repos/github/rpoleski/MulensModel"}, {"uid": "github/PSims/BayesEoR", "html_url": "https://rseng.github.io/software/repository/github/PSims/BayesEoR", "api_url": "https://rseng.github.io/software/api/repos/github/PSims/BayesEoR"}, {"uid": "github/JuliaOcean/AIBECS.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/AIBECS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/AIBECS.jl"}, {"uid": "github/JuliaOcean/PlanktonIndividuals.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/PlanktonIndividuals.jl"}, {"uid": "github/marseille-proteomique/DIAgui", "html_url": "https://rseng.github.io/software/repository/github/marseille-proteomique/DIAgui", "api_url": "https://rseng.github.io/software/api/repos/github/marseille-proteomique/DIAgui"}, {"uid": "github/whybsml/whybsml", "html_url": "https://rseng.github.io/software/repository/github/whybsml/whybsml", "api_url": "https://rseng.github.io/software/api/repos/github/whybsml/whybsml"}, {"uid": "github/JuliaHCI/ADI.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHCI/ADI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHCI/ADI.jl"}, {"uid": "github/NuSpaceSim/nupyprop", "html_url": "https://rseng.github.io/software/repository/github/NuSpaceSim/nupyprop", "api_url": "https://rseng.github.io/software/api/repos/github/NuSpaceSim/nupyprop"}, {"uid": "github/athob/py-ananke", "html_url": "https://rseng.github.io/software/repository/github/athob/py-ananke", "api_url": "https://rseng.github.io/software/api/repos/github/athob/py-ananke"}, {"uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum"}, {"uid": "github/m-a-d-n-e-s-s/madness", "html_url": "https://rseng.github.io/software/repository/github/m-a-d-n-e-s-s/madness", "api_url": "https://rseng.github.io/software/api/repos/github/m-a-d-n-e-s-s/madness"}, {"uid": "github/MaayanLab/signature-commons-ui", "html_url": "https://rseng.github.io/software/repository/github/MaayanLab/signature-commons-ui", "api_url": "https://rseng.github.io/software/api/repos/github/MaayanLab/signature-commons-ui"}, {"uid": "github/PyPO-dev/PyPO", "html_url": "https://rseng.github.io/software/repository/github/PyPO-dev/PyPO", "api_url": "https://rseng.github.io/software/api/repos/github/PyPO-dev/PyPO"}, {"uid": "github/Jesper-Karsten/MBASC", "html_url": "https://rseng.github.io/software/repository/github/Jesper-Karsten/MBASC", "api_url": "https://rseng.github.io/software/api/repos/github/Jesper-Karsten/MBASC"}, {"uid": "github/UM-PEPL/HallThruster.jl", "html_url": "https://rseng.github.io/software/repository/github/UM-PEPL/HallThruster.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UM-PEPL/HallThruster.jl"}, {"uid": "github/MRChemSoft/mrchem", "html_url": "https://rseng.github.io/software/repository/github/MRChemSoft/mrchem", "api_url": "https://rseng.github.io/software/api/repos/github/MRChemSoft/mrchem"}, {"uid": "github/pandas-dev/pandas", "html_url": "https://rseng.github.io/software/repository/github/pandas-dev/pandas", "api_url": "https://rseng.github.io/software/api/repos/github/pandas-dev/pandas"}, {"uid": "github/BenNordick/HiLoop", "html_url": "https://rseng.github.io/software/repository/github/BenNordick/HiLoop", "api_url": "https://rseng.github.io/software/api/repos/github/BenNordick/HiLoop"}, {"uid": "github/assume-framework/assume", "html_url": "https://rseng.github.io/software/repository/github/assume-framework/assume", "api_url": "https://rseng.github.io/software/api/repos/github/assume-framework/assume"}, {"uid": "github/pirl-unc/ace", "html_url": "https://rseng.github.io/software/repository/github/pirl-unc/ace", "api_url": "https://rseng.github.io/software/api/repos/github/pirl-unc/ace"}, {"uid": "github/soerendip/ms-mint", "html_url": "https://rseng.github.io/software/repository/github/soerendip/ms-mint", "api_url": "https://rseng.github.io/software/api/repos/github/soerendip/ms-mint"}, {"uid": "github/meta-logic/sequoia", "html_url": "https://rseng.github.io/software/repository/github/meta-logic/sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/meta-logic/sequoia"}, {"uid": "github/chemprop/chemprop_benchmark", "html_url": "https://rseng.github.io/software/repository/github/chemprop/chemprop_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/chemprop/chemprop_benchmark"}, {"uid": "github/chrisfinlay/tabascal", "html_url": "https://rseng.github.io/software/repository/github/chrisfinlay/tabascal", "api_url": "https://rseng.github.io/software/api/repos/github/chrisfinlay/tabascal"}, {"uid": "github/esoPanda/FTbg", "html_url": "https://rseng.github.io/software/repository/github/esoPanda/FTbg", "api_url": "https://rseng.github.io/software/api/repos/github/esoPanda/FTbg"}, {"uid": "github/champsproject/ldds", "html_url": "https://rseng.github.io/software/repository/github/champsproject/ldds", "api_url": "https://rseng.github.io/software/api/repos/github/champsproject/ldds"}, {"uid": "github/varchasgopalaswamy/AutoUncertainties", "html_url": "https://rseng.github.io/software/repository/github/varchasgopalaswamy/AutoUncertainties", "api_url": "https://rseng.github.io/software/api/repos/github/varchasgopalaswamy/AutoUncertainties"}, {"uid": "github/rice-solar-physics/HYDRAD", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/HYDRAD", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/HYDRAD"}, {"uid": "github/rice-solar-physics/EBTEL", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/EBTEL", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/EBTEL"}, {"uid": "github/samtools/bcftools", "html_url": "https://rseng.github.io/software/repository/github/samtools/bcftools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/bcftools"}, {"uid": "github/samtools/htslib", "html_url": "https://rseng.github.io/software/repository/github/samtools/htslib", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htslib"}, {"uid": "github/samtools/samtools", "html_url": "https://rseng.github.io/software/repository/github/samtools/samtools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/samtools"}, {"uid": "github/samtools/htsjdk", "html_url": "https://rseng.github.io/software/repository/github/samtools/htsjdk", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htsjdk"}, {"uid": "github/lahovniktadej/gatree", "html_url": "https://rseng.github.io/software/repository/github/lahovniktadej/gatree", "api_url": "https://rseng.github.io/software/api/repos/github/lahovniktadej/gatree"}, {"uid": "github/timahutchinson/redmonster", "html_url": "https://rseng.github.io/software/repository/github/timahutchinson/redmonster", "api_url": "https://rseng.github.io/software/api/repos/github/timahutchinson/redmonster"}, {"uid": "github/mifumagalli/cluster-cloc", "html_url": "https://rseng.github.io/software/repository/github/mifumagalli/cluster-cloc", "api_url": "https://rseng.github.io/software/api/repos/github/mifumagalli/cluster-cloc"}, {"uid": "github/OSSOS/SurveySimulator", "html_url": "https://rseng.github.io/software/repository/github/OSSOS/SurveySimulator", "api_url": "https://rseng.github.io/software/api/repos/github/OSSOS/SurveySimulator"}, {"uid": "github/benopp99/DPMhalo", "html_url": "https://rseng.github.io/software/repository/github/benopp99/DPMhalo", "api_url": "https://rseng.github.io/software/api/repos/github/benopp99/DPMhalo"}, {"uid": "github/beckermr/calclens", "html_url": "https://rseng.github.io/software/repository/github/beckermr/calclens", "api_url": "https://rseng.github.io/software/api/repos/github/beckermr/calclens"}, {"uid": "github/varlociraptor/varlociraptorhub.io", "html_url": "https://rseng.github.io/software/repository/github/varlociraptor/varlociraptorhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/varlociraptor/varlociraptorhub.io"}, {"uid": "github/jamescasbon/PyVCF", "html_url": "https://rseng.github.io/software/repository/github/jamescasbon/PyVCF", "api_url": "https://rseng.github.io/software/api/repos/github/jamescasbon/PyVCF"}, {"uid": "github/zoometh/iconr", "html_url": "https://rseng.github.io/software/repository/github/zoometh/iconr", "api_url": "https://rseng.github.io/software/api/repos/github/zoometh/iconr"}, {"uid": "github/PFPE/shipgrav", "html_url": "https://rseng.github.io/software/repository/github/PFPE/shipgrav", "api_url": "https://rseng.github.io/software/api/repos/github/PFPE/shipgrav"}, {"uid": "github/iain-mcdonald/PySSED", "html_url": "https://rseng.github.io/software/repository/github/iain-mcdonald/PySSED", "api_url": "https://rseng.github.io/software/api/repos/github/iain-mcdonald/PySSED"}, {"uid": "github/PyFstat/PyFstat", "html_url": "https://rseng.github.io/software/repository/github/PyFstat/PyFstat", "api_url": "https://rseng.github.io/software/api/repos/github/PyFstat/PyFstat"}, {"uid": "github/alchemistry/alchemlyb", "html_url": "https://rseng.github.io/software/repository/github/alchemistry/alchemlyb", "api_url": "https://rseng.github.io/software/api/repos/github/alchemistry/alchemlyb"}, {"uid": "github/cupy/cupy", "html_url": "https://rseng.github.io/software/repository/github/cupy/cupy", "api_url": "https://rseng.github.io/software/api/repos/github/cupy/cupy"}, {"uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "html_url": "https://rseng.github.io/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "api_url": "https://rseng.github.io/software/api/repos/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY"}, {"uid": "github/enthought/vpsearch", "html_url": "https://rseng.github.io/software/repository/github/enthought/vpsearch", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/vpsearch"}, {"uid": "github/enthought/mayavi", "html_url": "https://rseng.github.io/software/repository/github/enthought/mayavi", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/mayavi"}, {"uid": "github/hildebra/sdm", "html_url": "https://rseng.github.io/software/repository/github/hildebra/sdm", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/sdm"}, {"uid": "github/hildebra/LCA", "html_url": "https://rseng.github.io/software/repository/github/hildebra/LCA", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/LCA"}, {"uid": "github/paranoya/population-synthesis-toolkit", "html_url": "https://rseng.github.io/software/repository/github/paranoya/population-synthesis-toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/paranoya/population-synthesis-toolkit"}, {"uid": "github/cdw9bf/CompactGroup", "html_url": "https://rseng.github.io/software/repository/github/cdw9bf/CompactGroup", "api_url": "https://rseng.github.io/software/api/repos/github/cdw9bf/CompactGroup"}, {"uid": "github/sinc-lab/miRe2e", "html_url": "https://rseng.github.io/software/repository/github/sinc-lab/miRe2e", "api_url": "https://rseng.github.io/software/api/repos/github/sinc-lab/miRe2e"}, {"uid": "github/Pinlyu3/LRLoop", "html_url": "https://rseng.github.io/software/repository/github/Pinlyu3/LRLoop", "api_url": "https://rseng.github.io/software/api/repos/github/Pinlyu3/LRLoop"}, {"uid": "github/tsipkens/atems", "html_url": "https://rseng.github.io/software/repository/github/tsipkens/atems", "api_url": "https://rseng.github.io/software/api/repos/github/tsipkens/atems"}, {"uid": "github/quatrope/feets", "html_url": "https://rseng.github.io/software/repository/github/quatrope/feets", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/feets"}, {"uid": "github/quatrope/ProperImage", "html_url": "https://rseng.github.io/software/repository/github/quatrope/ProperImage", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/ProperImage"}, {"uid": "github/FluidityProject/fluidity", "html_url": "https://rseng.github.io/software/repository/github/FluidityProject/fluidity", "api_url": "https://rseng.github.io/software/api/repos/github/FluidityProject/fluidity"}, {"uid": "github/marco-oliva/pfp", "html_url": "https://rseng.github.io/software/repository/github/marco-oliva/pfp", "api_url": "https://rseng.github.io/software/api/repos/github/marco-oliva/pfp"}, {"uid": "github/martibosch/detectree", "html_url": "https://rseng.github.io/software/repository/github/martibosch/detectree", "api_url": "https://rseng.github.io/software/api/repos/github/martibosch/detectree"}, {"uid": "github/simon-smart88/shinyscholar", "html_url": "https://rseng.github.io/software/repository/github/simon-smart88/shinyscholar", "api_url": "https://rseng.github.io/software/api/repos/github/simon-smart88/shinyscholar"}, {"uid": "github/jacobmerson/model-traits", "html_url": "https://rseng.github.io/software/repository/github/jacobmerson/model-traits", "api_url": "https://rseng.github.io/software/api/repos/github/jacobmerson/model-traits"}, {"uid": "github/slcs-jsc/mptrac", "html_url": "https://rseng.github.io/software/repository/github/slcs-jsc/mptrac", "api_url": "https://rseng.github.io/software/api/repos/github/slcs-jsc/mptrac"}, {"uid": "github/AgentOxygen/HDP", "html_url": "https://rseng.github.io/software/repository/github/AgentOxygen/HDP", "api_url": "https://rseng.github.io/software/api/repos/github/AgentOxygen/HDP"}, {"uid": "github/taxprofiler/taxpasta", "html_url": "https://rseng.github.io/software/repository/github/taxprofiler/taxpasta", "api_url": "https://rseng.github.io/software/api/repos/github/taxprofiler/taxpasta"}, {"uid": "github/splicebox/PsiCLASS", "html_url": "https://rseng.github.io/software/repository/github/splicebox/PsiCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/splicebox/PsiCLASS"}, {"uid": "github/tensorflow/tensorflow", "html_url": "https://rseng.github.io/software/repository/github/tensorflow/tensorflow", "api_url": "https://rseng.github.io/software/api/repos/github/tensorflow/tensorflow"}, {"uid": "github/mianbreton/pysco", "html_url": "https://rseng.github.io/software/repository/github/mianbreton/pysco", "api_url": "https://rseng.github.io/software/api/repos/github/mianbreton/pysco"}, {"uid": "github/CarlosCoba/XookSuut-code", "html_url": "https://rseng.github.io/software/repository/github/CarlosCoba/XookSuut-code", "api_url": "https://rseng.github.io/software/api/repos/github/CarlosCoba/XookSuut-code"}, {"uid": "github/BGPS/distance-omnibus", "html_url": "https://rseng.github.io/software/repository/github/BGPS/distance-omnibus", "api_url": "https://rseng.github.io/software/api/repos/github/BGPS/distance-omnibus"}, {"uid": "github/biolab/orange-bio", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange-bio"}, {"uid": "github/biolab/orange3-network", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3-network", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3-network"}, {"uid": "github/biolab/orange3", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3"}, {"uid": "github/drcandacemakedamoore/cleanX", "html_url": "https://rseng.github.io/software/repository/github/drcandacemakedamoore/cleanX", "api_url": "https://rseng.github.io/software/api/repos/github/drcandacemakedamoore/cleanX"}, {"uid": "github/yuefan98/nleis.py", "html_url": "https://rseng.github.io/software/repository/github/yuefan98/nleis.py", "api_url": "https://rseng.github.io/software/api/repos/github/yuefan98/nleis.py"}, {"uid": "github/Orin-beep/PlasGO", "html_url": "https://rseng.github.io/software/repository/github/Orin-beep/PlasGO", "api_url": "https://rseng.github.io/software/api/repos/github/Orin-beep/PlasGO"}, {"uid": "github/abeelen/powspec", "html_url": "https://rseng.github.io/software/repository/github/abeelen/powspec", "api_url": "https://rseng.github.io/software/api/repos/github/abeelen/powspec"}, {"uid": "github/UUDigitalHumanitieslab/texcavator", "html_url": "https://rseng.github.io/software/repository/github/UUDigitalHumanitieslab/texcavator", "api_url": "https://rseng.github.io/software/api/repos/github/UUDigitalHumanitieslab/texcavator"}, {"uid": "github/sylvainprigent/napari-tracks-reader", "html_url": "https://rseng.github.io/software/repository/github/sylvainprigent/napari-tracks-reader", "api_url": "https://rseng.github.io/software/api/repos/github/sylvainprigent/napari-tracks-reader"}, {"uid": "github/jonaspleyer/cellular_raza", "html_url": "https://rseng.github.io/software/repository/github/jonaspleyer/cellular_raza", "api_url": "https://rseng.github.io/software/api/repos/github/jonaspleyer/cellular_raza"}, {"uid": "github/GalagaBits/JWST-FGS-Spelunker", "html_url": "https://rseng.github.io/software/repository/github/GalagaBits/JWST-FGS-Spelunker", "api_url": "https://rseng.github.io/software/api/repos/github/GalagaBits/JWST-FGS-Spelunker"}, {"uid": "github/cistib/origami", "html_url": "https://rseng.github.io/software/repository/github/cistib/origami", "api_url": "https://rseng.github.io/software/api/repos/github/cistib/origami"}, {"uid": "github/Tarskin/LaCyTools", "html_url": "https://rseng.github.io/software/repository/github/Tarskin/LaCyTools", "api_url": "https://rseng.github.io/software/api/repos/github/Tarskin/LaCyTools"}, {"uid": "github/OSUDSL/pydre", "html_url": "https://rseng.github.io/software/repository/github/OSUDSL/pydre", "api_url": "https://rseng.github.io/software/api/repos/github/OSUDSL/pydre"}, {"uid": "github/MDamiano/ExoTR", "html_url": "https://rseng.github.io/software/repository/github/MDamiano/ExoTR", "api_url": "https://rseng.github.io/software/api/repos/github/MDamiano/ExoTR"}, {"uid": "github/DorianDepriester/mtex2Gmsh", "html_url": "https://rseng.github.io/software/repository/github/DorianDepriester/mtex2Gmsh", "api_url": "https://rseng.github.io/software/api/repos/github/DorianDepriester/mtex2Gmsh"}, {"uid": "github/mlipatov/paint_atmospheres", "html_url": "https://rseng.github.io/software/repository/github/mlipatov/paint_atmospheres", "api_url": "https://rseng.github.io/software/api/repos/github/mlipatov/paint_atmospheres"}, {"uid": "github/harrispopgen/mutyper", "html_url": "https://rseng.github.io/software/repository/github/harrispopgen/mutyper", "api_url": "https://rseng.github.io/software/api/repos/github/harrispopgen/mutyper"}, {"uid": "github/hyattpd/Prodigal", "html_url": "https://rseng.github.io/software/repository/github/hyattpd/Prodigal", "api_url": "https://rseng.github.io/software/api/repos/github/hyattpd/Prodigal"}, {"uid": "github/Kkritos/Rapster", "html_url": "https://rseng.github.io/software/repository/github/Kkritos/Rapster", "api_url": "https://rseng.github.io/software/api/repos/github/Kkritos/Rapster"}, {"uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPOMDP/CompressedBeliefMDPs.jl"}, {"uid": "github/lehtiolab/msstitch", "html_url": "https://rseng.github.io/software/repository/github/lehtiolab/msstitch", "api_url": "https://rseng.github.io/software/api/repos/github/lehtiolab/msstitch"}, {"uid": "github/tariks/peakachu", "html_url": "https://rseng.github.io/software/repository/github/tariks/peakachu", "api_url": "https://rseng.github.io/software/api/repos/github/tariks/peakachu"}, {"uid": "github/awmann/M_-M_K-", "html_url": "https://rseng.github.io/software/repository/github/awmann/M_-M_K-", "api_url": "https://rseng.github.io/software/api/repos/github/awmann/M_-M_K-"}, {"uid": "github/eldariont/svim", "html_url": "https://rseng.github.io/software/repository/github/eldariont/svim", "api_url": "https://rseng.github.io/software/api/repos/github/eldariont/svim"}, {"uid": "github/rajmadan96/StochasticDominance.jl", "html_url": "https://rseng.github.io/software/repository/github/rajmadan96/StochasticDominance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rajmadan96/StochasticDominance.jl"}, {"uid": "github/RAMP-project/RAMP", "html_url": "https://rseng.github.io/software/repository/github/RAMP-project/RAMP", "api_url": "https://rseng.github.io/software/api/repos/github/RAMP-project/RAMP"}, {"uid": "github/LSSTDESC/CCL", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/CCL", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/CCL"}, {"uid": "github/LSSTDESC/Spectractor", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/Spectractor", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/Spectractor"}, {"uid": "github/LSSTDESC/BlendingToolKit", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/BlendingToolKit", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/BlendingToolKit"}, {"uid": "github/LSSTDESC/sacc", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/sacc", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/sacc"}, {"uid": "github/LSSTDESC/chroma", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/chroma", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/chroma"}, {"uid": "github/LSSTDESC/descqa", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/descqa", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/descqa"}, {"uid": "github/LSSTDESC/WeakLensingDeblending", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/WeakLensingDeblending", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/WeakLensingDeblending"}, {"uid": "github/LSSTDESC/snmachine", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/snmachine", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/snmachine"}, {"uid": "github/LSSTDESC/NaMaster", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/NaMaster", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/NaMaster"}, {"uid": "github/scottgigante/picopore", "html_url": "https://rseng.github.io/software/repository/github/scottgigante/picopore", "api_url": "https://rseng.github.io/software/api/repos/github/scottgigante/picopore"}, {"uid": "github/hmtabernero/SteParSyn", "html_url": "https://rseng.github.io/software/repository/github/hmtabernero/SteParSyn", "api_url": "https://rseng.github.io/software/api/repos/github/hmtabernero/SteParSyn"}, {"uid": "github/ekg/seqwish", "html_url": "https://rseng.github.io/software/repository/github/ekg/seqwish", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/seqwish"}, {"uid": "github/ekg/fastahack", "html_url": "https://rseng.github.io/software/repository/github/ekg/fastahack", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/fastahack"}, {"uid": "github/ekg/tabixpp", "html_url": "https://rseng.github.io/software/repository/github/ekg/tabixpp", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/tabixpp"}, {"uid": "github/ekg/freebayes", "html_url": "https://rseng.github.io/software/repository/github/ekg/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/freebayes"}, {"uid": "github/ekg/smithwaterman", "html_url": "https://rseng.github.io/software/repository/github/ekg/smithwaterman", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/smithwaterman"}, {"uid": "github/rchartra/NcCut", "html_url": "https://rseng.github.io/software/repository/github/rchartra/NcCut", "api_url": "https://rseng.github.io/software/api/repos/github/rchartra/NcCut"}, {"uid": "github/ymaan4/rficlean", "html_url": "https://rseng.github.io/software/repository/github/ymaan4/rficlean", "api_url": "https://rseng.github.io/software/api/repos/github/ymaan4/rficlean"}, {"uid": "github/FraunhoferIWES/foxes", "html_url": "https://rseng.github.io/software/repository/github/FraunhoferIWES/foxes", "api_url": "https://rseng.github.io/software/api/repos/github/FraunhoferIWES/foxes"}, {"uid": "github/jasonyangshadow/lpmx", "html_url": "https://rseng.github.io/software/repository/github/jasonyangshadow/lpmx", "api_url": "https://rseng.github.io/software/api/repos/github/jasonyangshadow/lpmx"}, {"uid": "github/DLR-AMR/t8code", "html_url": "https://rseng.github.io/software/repository/github/DLR-AMR/t8code", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-AMR/t8code"}, {"uid": "github/seamplex/feenox", "html_url": "https://rseng.github.io/software/repository/github/seamplex/feenox", "api_url": "https://rseng.github.io/software/api/repos/github/seamplex/feenox"}, {"uid": "github/kreshuklab/plant-seg", "html_url": "https://rseng.github.io/software/repository/github/kreshuklab/plant-seg", "api_url": "https://rseng.github.io/software/api/repos/github/kreshuklab/plant-seg"}, {"uid": "github/Yomguithereal/talisman", "html_url": "https://rseng.github.io/software/repository/github/Yomguithereal/talisman", "api_url": "https://rseng.github.io/software/api/repos/github/Yomguithereal/talisman"}, {"uid": "github/Pizzuti92/MG-MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/github/Pizzuti92/MG-MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/github/Pizzuti92/MG-MAMPOSSt"}, {"uid": "github/AngusWright/LAMBDAR", "html_url": "https://rseng.github.io/software/repository/github/AngusWright/LAMBDAR", "api_url": "https://rseng.github.io/software/api/repos/github/AngusWright/LAMBDAR"}, {"uid": "github/Pas-Kapli/mptp", "html_url": "https://rseng.github.io/software/repository/github/Pas-Kapli/mptp", "api_url": "https://rseng.github.io/software/api/repos/github/Pas-Kapli/mptp"}, {"uid": "github/ntlucia/BrownDwarf-SpectralIndices", "html_url": "https://rseng.github.io/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", "api_url": "https://rseng.github.io/software/api/repos/github/ntlucia/BrownDwarf-SpectralIndices"}, {"uid": "github/astrosupriyo/pyTANSPEC", "html_url": "https://rseng.github.io/software/repository/github/astrosupriyo/pyTANSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/astrosupriyo/pyTANSPEC"}, {"uid": "github/tvh0021/aweSOM", "html_url": "https://rseng.github.io/software/repository/github/tvh0021/aweSOM", "api_url": "https://rseng.github.io/software/api/repos/github/tvh0021/aweSOM"}, {"uid": "github/simonprovost/scikit-longitudinal", "html_url": "https://rseng.github.io/software/repository/github/simonprovost/scikit-longitudinal", "api_url": "https://rseng.github.io/software/api/repos/github/simonprovost/scikit-longitudinal"}, {"uid": "github/OrlandoLam/SAMT", "html_url": "https://rseng.github.io/software/repository/github/OrlandoLam/SAMT", "api_url": "https://rseng.github.io/software/api/repos/github/OrlandoLam/SAMT"}, {"uid": "github/Quantum-Dynamics-Hub/libra-code", "html_url": "https://rseng.github.io/software/repository/github/Quantum-Dynamics-Hub/libra-code", "api_url": "https://rseng.github.io/software/api/repos/github/Quantum-Dynamics-Hub/libra-code"}, {"uid": "github/cthoyt/bel-resources", "html_url": "https://rseng.github.io/software/repository/github/cthoyt/bel-resources", "api_url": "https://rseng.github.io/software/api/repos/github/cthoyt/bel-resources"}, {"uid": "github/arshajii/ema", "html_url": "https://rseng.github.io/software/repository/github/arshajii/ema", "api_url": "https://rseng.github.io/software/api/repos/github/arshajii/ema"}, {"uid": "github/privong/pyMCspearman", "html_url": "https://rseng.github.io/software/repository/github/privong/pyMCspearman", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pyMCspearman"}, {"uid": "github/privong/pymccorrelation", "html_url": "https://rseng.github.io/software/repository/github/privong/pymccorrelation", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pymccorrelation"}, {"uid": "github/ratt-ru/Stimela-classic", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela-classic", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela-classic"}, {"uid": "github/ratt-ru/eidos", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/eidos", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/eidos"}, {"uid": "github/ratt-ru/Stimela", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela"}, {"uid": "github/ratt-ru/QuartiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/QuartiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/QuartiCal"}, {"uid": "github/ratt-ru/solarkat", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/solarkat", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/solarkat"}, {"uid": "github/ratt-ru/montblanc", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/montblanc", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/montblanc"}, {"uid": "github/ratt-ru/dask-ms", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/dask-ms", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/dask-ms"}, {"uid": "github/ratt-ru/breizorro", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/breizorro", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/breizorro"}, {"uid": "github/ratt-ru/codex-africanus", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/codex-africanus", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/codex-africanus"}, {"uid": "github/ratt-ru/CubiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/CubiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/CubiCal"}, {"uid": "github/ratt-ru/rodrigues", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/rodrigues", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/rodrigues"}, {"uid": "github/ratt-ru/PyMORESANE", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/PyMORESANE", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/PyMORESANE"}, {"uid": "github/ratt-ru/smops", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/smops", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/smops"}, {"uid": "github/10XGenomics/bamtofastq", "html_url": "https://rseng.github.io/software/repository/github/10XGenomics/bamtofastq", "api_url": "https://rseng.github.io/software/api/repos/github/10XGenomics/bamtofastq"}, {"uid": "github/Exo-MerCat/Exo-MerCat", "html_url": "https://rseng.github.io/software/repository/github/Exo-MerCat/Exo-MerCat", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-MerCat/Exo-MerCat"}, {"uid": "github/traja-team/traja", "html_url": "https://rseng.github.io/software/repository/github/traja-team/traja", "api_url": "https://rseng.github.io/software/api/repos/github/traja-team/traja"}, {"uid": "github/glenco/lensed", "html_url": "https://rseng.github.io/software/repository/github/glenco/lensed", "api_url": "https://rseng.github.io/software/api/repos/github/glenco/lensed"}, {"uid": "github/pwry/lextes", "html_url": "https://rseng.github.io/software/repository/github/pwry/lextes", "api_url": "https://rseng.github.io/software/api/repos/github/pwry/lextes"}, {"uid": "github/CityU-AIM-Group/HTD", "html_url": "https://rseng.github.io/software/repository/github/CityU-AIM-Group/HTD", "api_url": "https://rseng.github.io/software/api/repos/github/CityU-AIM-Group/HTD"}, {"uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", "html_url": "https://rseng.github.io/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", "api_url": "https://rseng.github.io/software/api/repos/github/Wenxin-Wan/ephor_wp4_method_tutorial"}, {"uid": "github/neslusan/BELTCROSS2", "html_url": "https://rseng.github.io/software/repository/github/neslusan/BELTCROSS2", "api_url": "https://rseng.github.io/software/api/repos/github/neslusan/BELTCROSS2"}, {"uid": "github/Martinsos/edlib", "html_url": "https://rseng.github.io/software/repository/github/Martinsos/edlib", "api_url": "https://rseng.github.io/software/api/repos/github/Martinsos/edlib"}, {"uid": "github/UAMCAntwerpen/LEADD", "html_url": "https://rseng.github.io/software/repository/github/UAMCAntwerpen/LEADD", "api_url": "https://rseng.github.io/software/api/repos/github/UAMCAntwerpen/LEADD"}, {"uid": "github/kimberg/voxbo", "html_url": "https://rseng.github.io/software/repository/github/kimberg/voxbo", "api_url": "https://rseng.github.io/software/api/repos/github/kimberg/voxbo"}, {"uid": "github/szhorvat/IGraphM", "html_url": "https://rseng.github.io/software/repository/github/szhorvat/IGraphM", "api_url": "https://rseng.github.io/software/api/repos/github/szhorvat/IGraphM"}, {"uid": "github/IDEMSInternational/ExcelToShiny", "html_url": "https://rseng.github.io/software/repository/github/IDEMSInternational/ExcelToShiny", "api_url": "https://rseng.github.io/software/api/repos/github/IDEMSInternational/ExcelToShiny"}, {"uid": "github/xmuyulab/DreamDIA-XMBD", "html_url": "https://rseng.github.io/software/repository/github/xmuyulab/DreamDIA-XMBD", "api_url": "https://rseng.github.io/software/api/repos/github/xmuyulab/DreamDIA-XMBD"}, {"uid": "github/maxbernyk/lightcone", "html_url": "https://rseng.github.io/software/repository/github/maxbernyk/lightcone", "api_url": "https://rseng.github.io/software/api/repos/github/maxbernyk/lightcone"}, {"uid": "github/vaexio/vaex", "html_url": "https://rseng.github.io/software/repository/github/vaexio/vaex", "api_url": "https://rseng.github.io/software/api/repos/github/vaexio/vaex"}, {"uid": "github/ericagol/TTVFaster", "html_url": "https://rseng.github.io/software/repository/github/ericagol/TTVFaster", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/TTVFaster"}, {"uid": "github/ericagol/NbodyGradient.jl", "html_url": "https://rseng.github.io/software/repository/github/ericagol/NbodyGradient.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/NbodyGradient.jl"}, {"uid": "github/r-lib/gert", "html_url": "https://rseng.github.io/software/repository/github/r-lib/gert", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/gert"}, {"uid": "github/r-lib/credentials", "html_url": "https://rseng.github.io/software/repository/github/r-lib/credentials", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/credentials"}, {"uid": "github/r-lib/lintr", "html_url": "https://rseng.github.io/software/repository/github/r-lib/lintr", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/lintr"}, {"uid": "github/achaikova/frbmclust", "html_url": "https://rseng.github.io/software/repository/github/achaikova/frbmclust", "api_url": "https://rseng.github.io/software/api/repos/github/achaikova/frbmclust"}, {"uid": "github/Mat-dp/mat-dp-core", "html_url": "https://rseng.github.io/software/repository/github/Mat-dp/mat-dp-core", "api_url": "https://rseng.github.io/software/api/repos/github/Mat-dp/mat-dp-core"}, {"uid": "github/anugrahjo/PySLSQP", "html_url": "https://rseng.github.io/software/repository/github/anugrahjo/PySLSQP", "api_url": "https://rseng.github.io/software/api/repos/github/anugrahjo/PySLSQP"}, {"uid": "github/underworldcode/underworld3", "html_url": "https://rseng.github.io/software/repository/github/underworldcode/underworld3", "api_url": "https://rseng.github.io/software/api/repos/github/underworldcode/underworld3"}, {"uid": "github/healytwin1/HISS", "html_url": "https://rseng.github.io/software/repository/github/healytwin1/HISS", "api_url": "https://rseng.github.io/software/api/repos/github/healytwin1/HISS"}, {"uid": "github/stevengiacalone/triceratops", "html_url": "https://rseng.github.io/software/repository/github/stevengiacalone/triceratops", "api_url": "https://rseng.github.io/software/api/repos/github/stevengiacalone/triceratops"}, {"uid": "github/matvii/ADAM", "html_url": "https://rseng.github.io/software/repository/github/matvii/ADAM", "api_url": "https://rseng.github.io/software/api/repos/github/matvii/ADAM"}, {"uid": "github/aL3x-O-o-Hung/CAT-Net", "html_url": "https://rseng.github.io/software/repository/github/aL3x-O-o-Hung/CAT-Net", "api_url": "https://rseng.github.io/software/api/repos/github/aL3x-O-o-Hung/CAT-Net"}, {"uid": "github/rathnakumars/difference-smoothing", "html_url": "https://rseng.github.io/software/repository/github/rathnakumars/difference-smoothing", "api_url": "https://rseng.github.io/software/api/repos/github/rathnakumars/difference-smoothing"}, {"uid": "github/bxia888/CEFCIG", "html_url": "https://rseng.github.io/software/repository/github/bxia888/CEFCIG", "api_url": "https://rseng.github.io/software/api/repos/github/bxia888/CEFCIG"}, {"uid": "github/michaelhb/superplot", "html_url": "https://rseng.github.io/software/repository/github/michaelhb/superplot", "api_url": "https://rseng.github.io/software/api/repos/github/michaelhb/superplot"}, {"uid": "github/julie-forman-kay-lab/SPyCi-PDB", "html_url": "https://rseng.github.io/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", "api_url": "https://rseng.github.io/software/api/repos/github/julie-forman-kay-lab/SPyCi-PDB"}, {"uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/MoSDeF-dihedral-fit"}, {"uid": "github/GOMC-WSU/GOMC", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/GOMC", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/GOMC"}, {"uid": "github/rx-li/EasyCellType", "html_url": "https://rseng.github.io/software/repository/github/rx-li/EasyCellType", "api_url": "https://rseng.github.io/software/api/repos/github/rx-li/EasyCellType"}, {"uid": "github/RoelofBerg/limereg", "html_url": "https://rseng.github.io/software/repository/github/RoelofBerg/limereg", "api_url": "https://rseng.github.io/software/api/repos/github/RoelofBerg/limereg"}, {"uid": "github/crs4/rocrate-validator", "html_url": "https://rseng.github.io/software/repository/github/crs4/rocrate-validator", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/rocrate-validator"}, {"uid": "github/crs4/life_monitor", "html_url": "https://rseng.github.io/software/repository/github/crs4/life_monitor", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/life_monitor"}, {"uid": "github/arangrhie/merfin", "html_url": "https://rseng.github.io/software/repository/github/arangrhie/merfin", "api_url": "https://rseng.github.io/software/api/repos/github/arangrhie/merfin"}, {"uid": "github/Ajstros/pyripherals", "html_url": "https://rseng.github.io/software/repository/github/Ajstros/pyripherals", "api_url": "https://rseng.github.io/software/api/repos/github/Ajstros/pyripherals"}, {"uid": "github/FastMLC/fMLC", "html_url": "https://rseng.github.io/software/repository/github/FastMLC/fMLC", "api_url": "https://rseng.github.io/software/api/repos/github/FastMLC/fMLC"}, {"uid": "github/darthoctopus/reggae", "html_url": "https://rseng.github.io/software/repository/github/darthoctopus/reggae", "api_url": "https://rseng.github.io/software/api/repos/github/darthoctopus/reggae"}, {"uid": "github/astro-friedel/CADRE", "html_url": "https://rseng.github.io/software/repository/github/astro-friedel/CADRE", "api_url": "https://rseng.github.io/software/api/repos/github/astro-friedel/CADRE"}, {"uid": "github/canimus/cuallee", "html_url": "https://rseng.github.io/software/repository/github/canimus/cuallee", "api_url": "https://rseng.github.io/software/api/repos/github/canimus/cuallee"}, {"uid": "github/CSUBioGroup/GraphLncLoc", "html_url": "https://rseng.github.io/software/repository/github/CSUBioGroup/GraphLncLoc", "api_url": "https://rseng.github.io/software/api/repos/github/CSUBioGroup/GraphLncLoc"}, {"uid": "github/lightning-project/lightning", "html_url": "https://rseng.github.io/software/repository/github/lightning-project/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/lightning-project/lightning"}, {"uid": "github/ariedel/lacewing", "html_url": "https://rseng.github.io/software/repository/github/ariedel/lacewing", "api_url": "https://rseng.github.io/software/api/repos/github/ariedel/lacewing"}, {"uid": "github/SophieMLV/axionHMcode", "html_url": "https://rseng.github.io/software/repository/github/SophieMLV/axionHMcode", "api_url": "https://rseng.github.io/software/api/repos/github/SophieMLV/axionHMcode"}, {"uid": "github/DMGW-Goethe/imripy", "html_url": "https://rseng.github.io/software/repository/github/DMGW-Goethe/imripy", "api_url": "https://rseng.github.io/software/api/repos/github/DMGW-Goethe/imripy"}, {"uid": "github/gouverneurp/eVAS", "html_url": "https://rseng.github.io/software/repository/github/gouverneurp/eVAS", "api_url": "https://rseng.github.io/software/api/repos/github/gouverneurp/eVAS"}, {"uid": "github/epiforecasts/covidregionaldata", "html_url": "https://rseng.github.io/software/repository/github/epiforecasts/covidregionaldata", "api_url": "https://rseng.github.io/software/api/repos/github/epiforecasts/covidregionaldata"}, {"uid": "github/fred3m/toyz", "html_url": "https://rseng.github.io/software/repository/github/fred3m/toyz", "api_url": "https://rseng.github.io/software/api/repos/github/fred3m/toyz"}, {"uid": "github/hablabx/rfast", "html_url": "https://rseng.github.io/software/repository/github/hablabx/rfast", "api_url": "https://rseng.github.io/software/api/repos/github/hablabx/rfast"}, {"uid": "github/kateharborne/SimSpin", "html_url": "https://rseng.github.io/software/repository/github/kateharborne/SimSpin", "api_url": "https://rseng.github.io/software/api/repos/github/kateharborne/SimSpin"}, {"uid": "github/dingshandeng/diskmint", "html_url": "https://rseng.github.io/software/repository/github/dingshandeng/diskmint", "api_url": "https://rseng.github.io/software/api/repos/github/dingshandeng/diskmint"}, {"uid": "github/merenlab/anvio", "html_url": "https://rseng.github.io/software/repository/github/merenlab/anvio", "api_url": "https://rseng.github.io/software/api/repos/github/merenlab/anvio"}, {"uid": "github/GregoryFaust/samblaster", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/samblaster", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/samblaster"}, {"uid": "github/GregoryFaust/yaha", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/yaha", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/yaha"}, {"uid": "github/ggonnella/gfapy", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/gfapy", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/gfapy"}, {"uid": "github/ggonnella/fastsubtrees", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/fastsubtrees", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/fastsubtrees"}, {"uid": "github/ggonnella/rgfa", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/rgfa", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/rgfa"}, {"uid": "github/ewels/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/ewels/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/ewels/MultiQC"}, {"uid": "github/tacazares/SeedMatchR", "html_url": "https://rseng.github.io/software/repository/github/tacazares/SeedMatchR", "api_url": "https://rseng.github.io/software/api/repos/github/tacazares/SeedMatchR"}, {"uid": "github/fzi-forschungszentrum-informatik/TSInterpret", "html_url": "https://rseng.github.io/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", "api_url": "https://rseng.github.io/software/api/repos/github/fzi-forschungszentrum-informatik/TSInterpret"}, {"uid": "github/auckland-cosmo/interp-mc", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/interp-mc", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/interp-mc"}, {"uid": "github/auckland-cosmo/defrost-mpi", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/defrost-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/defrost-mpi"}, {"uid": "github/auckland-cosmo/PyUltraLight", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/PyUltraLight", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/PyUltraLight"}, {"uid": "github/yangao07/abPOA", "html_url": "https://rseng.github.io/software/repository/github/yangao07/abPOA", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/abPOA"}, {"uid": "github/yangao07/TideHunter", "html_url": "https://rseng.github.io/software/repository/github/yangao07/TideHunter", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/TideHunter"}, {"uid": "github/BRAIN-TO/GIRFReco.jl", "html_url": "https://rseng.github.io/software/repository/github/BRAIN-TO/GIRFReco.jl", "api_url": "https://rseng.github.io/software/api/repos/github/BRAIN-TO/GIRFReco.jl"}, {"uid": "github/hemanthpruthvi/PyAstroPol", "html_url": "https://rseng.github.io/software/repository/github/hemanthpruthvi/PyAstroPol", "api_url": "https://rseng.github.io/software/api/repos/github/hemanthpruthvi/PyAstroPol"}, {"uid": "github/cmoestl/3DCORE", "html_url": "https://rseng.github.io/software/repository/github/cmoestl/3DCORE", "api_url": "https://rseng.github.io/software/api/repos/github/cmoestl/3DCORE"}, {"uid": "github/AstarVienna/skycalc_ipy", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/skycalc_ipy", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/skycalc_ipy"}, {"uid": "github/AstarVienna/ScopeSim_Templates", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/ScopeSim_Templates", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/ScopeSim_Templates"}, {"uid": "github/AstarVienna/irdb", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/irdb", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/irdb"}, {"uid": "github/AstarVienna/Pyckles", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/Pyckles", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/Pyckles"}, {"uid": "github/AstarVienna/AnisoCADO", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/AnisoCADO", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/AnisoCADO"}, {"uid": "github/flabarga/iSTARMOD", "html_url": "https://rseng.github.io/software/repository/github/flabarga/iSTARMOD", "api_url": "https://rseng.github.io/software/api/repos/github/flabarga/iSTARMOD"}, {"uid": "github/IRL2/nanover-server-py", "html_url": "https://rseng.github.io/software/repository/github/IRL2/nanover-server-py", "api_url": "https://rseng.github.io/software/api/repos/github/IRL2/nanover-server-py"}, {"uid": "github/uclchem/Chemulator", "html_url": "https://rseng.github.io/software/repository/github/uclchem/Chemulator", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/Chemulator"}, {"uid": "github/uclchem/SpectralRadex", "html_url": "https://rseng.github.io/software/repository/github/uclchem/SpectralRadex", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/SpectralRadex"}, {"uid": "github/xinyiguan/py2lispIDyOM", "html_url": "https://rseng.github.io/software/repository/github/xinyiguan/py2lispIDyOM", "api_url": "https://rseng.github.io/software/api/repos/github/xinyiguan/py2lispIDyOM"}, {"uid": "github/InfOmics/PanDelos-frags", "html_url": "https://rseng.github.io/software/repository/github/InfOmics/PanDelos-frags", "api_url": "https://rseng.github.io/software/api/repos/github/InfOmics/PanDelos-frags"}, {"uid": "github/Sm00thix/IKPLS", "html_url": "https://rseng.github.io/software/repository/github/Sm00thix/IKPLS", "api_url": "https://rseng.github.io/software/api/repos/github/Sm00thix/IKPLS"}, {"uid": "github/joglekara/VlaPy", "html_url": "https://rseng.github.io/software/repository/github/joglekara/VlaPy", "api_url": "https://rseng.github.io/software/api/repos/github/joglekara/VlaPy"}, {"uid": "github/pratheesh3780/grapesAgri1", "html_url": "https://rseng.github.io/software/repository/github/pratheesh3780/grapesAgri1", "api_url": "https://rseng.github.io/software/api/repos/github/pratheesh3780/grapesAgri1"}, {"uid": "github/vbaliga/gaussplotR", "html_url": "https://rseng.github.io/software/repository/github/vbaliga/gaussplotR", "api_url": "https://rseng.github.io/software/api/repos/github/vbaliga/gaussplotR"}, {"uid": "github/shankarpandala/lazypredict", "html_url": "https://rseng.github.io/software/repository/github/shankarpandala/lazypredict", "api_url": "https://rseng.github.io/software/api/repos/github/shankarpandala/lazypredict"}, {"uid": "github/jradavenport/appaloosa", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/appaloosa", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/appaloosa"}, {"uid": "github/jradavenport/FBEYE", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/FBEYE", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/FBEYE"}, {"uid": "github/jradavenport/TheHammer", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/TheHammer", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/TheHammer"}, {"uid": "github/logological/gpp", "html_url": "https://rseng.github.io/software/repository/github/logological/gpp", "api_url": "https://rseng.github.io/software/api/repos/github/logological/gpp"}, {"uid": "github/nbarbey/TomograPy", "html_url": "https://rseng.github.io/software/repository/github/nbarbey/TomograPy", "api_url": "https://rseng.github.io/software/api/repos/github/nbarbey/TomograPy"}, {"uid": "github/Qiskit-Extensions/qiskit-dynamics", "html_url": "https://rseng.github.io/software/repository/github/Qiskit-Extensions/qiskit-dynamics", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit-Extensions/qiskit-dynamics"}, {"uid": "github/TPI-Immunogenetics/igmat", "html_url": "https://rseng.github.io/software/repository/github/TPI-Immunogenetics/igmat", "api_url": "https://rseng.github.io/software/api/repos/github/TPI-Immunogenetics/igmat"}, {"uid": "github/comprna/reorientexpress", "html_url": "https://rseng.github.io/software/repository/github/comprna/reorientexpress", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/reorientexpress"}, {"uid": "github/comprna/SUPPA", "html_url": "https://rseng.github.io/software/repository/github/comprna/SUPPA", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/SUPPA"}, {"uid": "github/infer-actively/pymdp", "html_url": "https://rseng.github.io/software/repository/github/infer-actively/pymdp", "api_url": "https://rseng.github.io/software/api/repos/github/infer-actively/pymdp"}, {"uid": "github/SimVascular/svZeroDSolver", "html_url": "https://rseng.github.io/software/repository/github/SimVascular/svZeroDSolver", "api_url": "https://rseng.github.io/software/api/repos/github/SimVascular/svZeroDSolver"}, {"uid": "github/pikarpov-LANL/Sapsan", "html_url": "https://rseng.github.io/software/repository/github/pikarpov-LANL/Sapsan", "api_url": "https://rseng.github.io/software/api/repos/github/pikarpov-LANL/Sapsan"}, {"uid": "github/jpmens/jo", "html_url": "https://rseng.github.io/software/repository/github/jpmens/jo", "api_url": "https://rseng.github.io/software/api/repos/github/jpmens/jo"}, {"uid": "github/moble/scri", "html_url": "https://rseng.github.io/software/repository/github/moble/scri", "api_url": "https://rseng.github.io/software/api/repos/github/moble/scri"}, {"uid": "github/moble/GWFrames", "html_url": "https://rseng.github.io/software/repository/github/moble/GWFrames", "api_url": "https://rseng.github.io/software/api/repos/github/moble/GWFrames"}, {"uid": "github/damcb/tyssue", "html_url": "https://rseng.github.io/software/repository/github/damcb/tyssue", "api_url": "https://rseng.github.io/software/api/repos/github/damcb/tyssue"}, {"uid": "github/recipy/recipy", "html_url": "https://rseng.github.io/software/repository/github/recipy/recipy", "api_url": "https://rseng.github.io/software/api/repos/github/recipy/recipy"}, {"uid": "github/Nicholaswogan/photochem", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/photochem", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/photochem"}, {"uid": "github/Nicholaswogan/PhotochemPy", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/PhotochemPy", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/PhotochemPy"}, {"uid": "github/AOtools/aotools", "html_url": "https://rseng.github.io/software/repository/github/AOtools/aotools", "api_url": "https://rseng.github.io/software/api/repos/github/AOtools/aotools"}, {"uid": "github/hsergi/Roman_Coronagraph_ETC", "html_url": "https://rseng.github.io/software/repository/github/hsergi/Roman_Coronagraph_ETC", "api_url": "https://rseng.github.io/software/api/repos/github/hsergi/Roman_Coronagraph_ETC"}, {"uid": "github/HUST-DataMan/FRMC", "html_url": "https://rseng.github.io/software/repository/github/HUST-DataMan/FRMC", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-DataMan/FRMC"}, {"uid": "github/amueller/word_cloud", "html_url": "https://rseng.github.io/software/repository/github/amueller/word_cloud", "api_url": "https://rseng.github.io/software/api/repos/github/amueller/word_cloud"}, {"uid": "github/SynxFlow/SynxFlow", "html_url": "https://rseng.github.io/software/repository/github/SynxFlow/SynxFlow", "api_url": "https://rseng.github.io/software/api/repos/github/SynxFlow/SynxFlow"}, {"uid": "github/gokalpcelik/ROHMMCLI", "html_url": "https://rseng.github.io/software/repository/github/gokalpcelik/ROHMMCLI", "api_url": "https://rseng.github.io/software/api/repos/github/gokalpcelik/ROHMMCLI"}, {"uid": "github/kolikem/loma", "html_url": "https://rseng.github.io/software/repository/github/kolikem/loma", "api_url": "https://rseng.github.io/software/api/repos/github/kolikem/loma"}, {"uid": "github/FofanovLab/mtsv_tools", "html_url": "https://rseng.github.io/software/repository/github/FofanovLab/mtsv_tools", "api_url": "https://rseng.github.io/software/api/repos/github/FofanovLab/mtsv_tools"}, {"uid": "github/r-cas/caracas", "html_url": "https://rseng.github.io/software/repository/github/r-cas/caracas", "api_url": "https://rseng.github.io/software/api/repos/github/r-cas/caracas"}, {"uid": "github/stedolan/jq", "html_url": "https://rseng.github.io/software/repository/github/stedolan/jq", "api_url": "https://rseng.github.io/software/api/repos/github/stedolan/jq"}, {"uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", "html_url": "https://rseng.github.io/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", "api_url": "https://rseng.github.io/software/api/repos/github/sunnyvagnozzi/Braneworld-extra-dimensions"}, {"uid": "github/johannesulf/dsigma", "html_url": "https://rseng.github.io/software/repository/github/johannesulf/dsigma", "api_url": "https://rseng.github.io/software/api/repos/github/johannesulf/dsigma"}, {"uid": "github/melobio/Attune", "html_url": "https://rseng.github.io/software/repository/github/melobio/Attune", "api_url": "https://rseng.github.io/software/api/repos/github/melobio/Attune"}, {"uid": "github/maserlib/ExPRES", "html_url": "https://rseng.github.io/software/repository/github/maserlib/ExPRES", "api_url": "https://rseng.github.io/software/api/repos/github/maserlib/ExPRES"}, {"uid": "github/mcfrith/dnarrange", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/dnarrange", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/dnarrange"}, {"uid": "github/mcfrith/tandem-genotypes", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/tandem-genotypes", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/tandem-genotypes"}, {"uid": "github/fair-data/fairdatapoint-client", "html_url": "https://rseng.github.io/software/repository/github/fair-data/fairdatapoint-client", "api_url": "https://rseng.github.io/software/api/repos/github/fair-data/fairdatapoint-client"}, {"uid": "github/NicOudart/PyBWE", "html_url": "https://rseng.github.io/software/repository/github/NicOudart/PyBWE", "api_url": "https://rseng.github.io/software/api/repos/github/NicOudart/PyBWE"}, {"uid": "github/tessgi/tvguide", "html_url": "https://rseng.github.io/software/repository/github/tessgi/tvguide", "api_url": "https://rseng.github.io/software/api/repos/github/tessgi/tvguide"}, {"uid": "github/gbernstein/gbdes", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/gbdes", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/gbdes"}, {"uid": "github/gbernstein/pixmappy", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/pixmappy", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/pixmappy"}, {"uid": "github/ProfessorBrunner/rc3-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ProfessorBrunner/rc3-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ProfessorBrunner/rc3-pipeline"}, {"uid": "github/netrias/rnassist", "html_url": "https://rseng.github.io/software/repository/github/netrias/rnassist", "api_url": "https://rseng.github.io/software/api/repos/github/netrias/rnassist"}, {"uid": "github/childmindresearch/wristpy", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/wristpy", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/wristpy"}, {"uid": "github/childmindresearch/actisleep-tracker", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/actisleep-tracker", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/actisleep-tracker"}, {"uid": "github/ColdThunder/NR-code", "html_url": "https://rseng.github.io/software/repository/github/ColdThunder/NR-code", "api_url": "https://rseng.github.io/software/api/repos/github/ColdThunder/NR-code"}, {"uid": "github/lysovosyl/NanoDeep", "html_url": "https://rseng.github.io/software/repository/github/lysovosyl/NanoDeep", "api_url": "https://rseng.github.io/software/api/repos/github/lysovosyl/NanoDeep"}, {"uid": "github/gaelforget/MITgcm.jl", "html_url": "https://rseng.github.io/software/repository/github/gaelforget/MITgcm.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gaelforget/MITgcm.jl"}, {"uid": "github/HKU-BAL/Clair3", "html_url": "https://rseng.github.io/software/repository/github/HKU-BAL/Clair3", "api_url": "https://rseng.github.io/software/api/repos/github/HKU-BAL/Clair3"}, {"uid": "github/bretthandrews/flexCE", "html_url": "https://rseng.github.io/software/repository/github/bretthandrews/flexCE", "api_url": "https://rseng.github.io/software/api/repos/github/bretthandrews/flexCE"}, {"uid": "github/sdnjly/WSDL-AD", "html_url": "https://rseng.github.io/software/repository/github/sdnjly/WSDL-AD", "api_url": "https://rseng.github.io/software/api/repos/github/sdnjly/WSDL-AD"}, {"uid": "github/ec-jrc/nrt", "html_url": "https://rseng.github.io/software/repository/github/ec-jrc/nrt", "api_url": "https://rseng.github.io/software/api/repos/github/ec-jrc/nrt"}, {"uid": "github/materialsproject/pymatgen-analysis-defects", "html_url": "https://rseng.github.io/software/repository/github/materialsproject/pymatgen-analysis-defects", "api_url": "https://rseng.github.io/software/api/repos/github/materialsproject/pymatgen-analysis-defects"}, {"uid": "github/Degiacomi-Lab/molearn", "html_url": "https://rseng.github.io/software/repository/github/Degiacomi-Lab/molearn", "api_url": "https://rseng.github.io/software/api/repos/github/Degiacomi-Lab/molearn"}, {"uid": "github/bge-barcoding/gene_fetch", "html_url": "https://rseng.github.io/software/repository/github/bge-barcoding/gene_fetch", "api_url": "https://rseng.github.io/software/api/repos/github/bge-barcoding/gene_fetch"}, {"uid": "github/surf-eds/one-button-compute", "html_url": "https://rseng.github.io/software/repository/github/surf-eds/one-button-compute", "api_url": "https://rseng.github.io/software/api/repos/github/surf-eds/one-button-compute"}, {"uid": "github/FengTaoSMU/MOBFinder", "html_url": "https://rseng.github.io/software/repository/github/FengTaoSMU/MOBFinder", "api_url": "https://rseng.github.io/software/api/repos/github/FengTaoSMU/MOBFinder"}, {"uid": "github/shbhuk/mrexo", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/mrexo", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/mrexo"}, {"uid": "github/shbhuk/barycorrpy", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/barycorrpy", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/barycorrpy"}, {"uid": "github/zjupgx/modig", "html_url": "https://rseng.github.io/software/repository/github/zjupgx/modig", "api_url": "https://rseng.github.io/software/api/repos/github/zjupgx/modig"}, {"uid": "github/miguelcarcamov/csromer", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/csromer", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/csromer"}, {"uid": "github/miguelcarcamov/gpuvmem", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/gpuvmem", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/gpuvmem"}, {"uid": "github/joacoh/wise2mbh", "html_url": "https://rseng.github.io/software/repository/github/joacoh/wise2mbh", "api_url": "https://rseng.github.io/software/api/repos/github/joacoh/wise2mbh"}, {"uid": "github/samuelmurail/af_analysis", "html_url": "https://rseng.github.io/software/repository/github/samuelmurail/af_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/samuelmurail/af_analysis"}, {"uid": "github/FergusDonnan/PAHDecomp", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PAHDecomp", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PAHDecomp"}, {"uid": "github/FergusDonnan/PyROA", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PyROA", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PyROA"}, {"uid": "github/FergusDonnan/Running-Optimal-Average", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/Running-Optimal-Average", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/Running-Optimal-Average"}, {"uid": "github/openneuropet/PET2BIDS", "html_url": "https://rseng.github.io/software/repository/github/openneuropet/PET2BIDS", "api_url": "https://rseng.github.io/software/api/repos/github/openneuropet/PET2BIDS"}, {"uid": "github/joshuakt/Oxygen-False-Positives", "html_url": "https://rseng.github.io/software/repository/github/joshuakt/Oxygen-False-Positives", "api_url": "https://rseng.github.io/software/api/repos/github/joshuakt/Oxygen-False-Positives"}, {"uid": "github/Bahler-Lab/pyphe", "html_url": "https://rseng.github.io/software/repository/github/Bahler-Lab/pyphe", "api_url": "https://rseng.github.io/software/api/repos/github/Bahler-Lab/pyphe"}, {"uid": "github/leapigufpb/FuzzyClass", "html_url": "https://rseng.github.io/software/repository/github/leapigufpb/FuzzyClass", "api_url": "https://rseng.github.io/software/api/repos/github/leapigufpb/FuzzyClass"}, {"uid": "github/oliveirara/polyMV", "html_url": "https://rseng.github.io/software/repository/github/oliveirara/polyMV", "api_url": "https://rseng.github.io/software/api/repos/github/oliveirara/polyMV"}, {"uid": "github/yyZhang14/dbEssLnc", "html_url": "https://rseng.github.io/software/repository/github/yyZhang14/dbEssLnc", "api_url": "https://rseng.github.io/software/api/repos/github/yyZhang14/dbEssLnc"}, {"uid": "github/Cascella-Group-UiO/HyMD", "html_url": "https://rseng.github.io/software/repository/github/Cascella-Group-UiO/HyMD", "api_url": "https://rseng.github.io/software/api/repos/github/Cascella-Group-UiO/HyMD"}, {"uid": "github/thegenemyers/DAMAPPER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAMAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAMAPPER"}, {"uid": "github/thegenemyers/DAZZ_DB", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAZZ_DB", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAZZ_DB"}, {"uid": "github/thegenemyers/FASTK", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/FASTK", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/FASTK"}, {"uid": "github/thegenemyers/DEXTRACTOR", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DEXTRACTOR", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DEXTRACTOR"}, {"uid": "github/thegenemyers/DALIGNER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DALIGNER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DALIGNER"}, {"uid": "github/qmarcou/IGoR", "html_url": "https://rseng.github.io/software/repository/github/qmarcou/IGoR", "api_url": "https://rseng.github.io/software/api/repos/github/qmarcou/IGoR"}, {"uid": "github/hover2pi/SEDkit", "html_url": "https://rseng.github.io/software/repository/github/hover2pi/SEDkit", "api_url": "https://rseng.github.io/software/api/repos/github/hover2pi/SEDkit"}, {"uid": "github/EnricoCorsaro/DIAMONDS", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/DIAMONDS", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/DIAMONDS"}, {"uid": "github/EnricoCorsaro/FAMED", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/FAMED", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/FAMED"}, {"uid": "github/daiqile96/OTTERS_paper", "html_url": "https://rseng.github.io/software/repository/github/daiqile96/OTTERS_paper", "api_url": "https://rseng.github.io/software/api/repos/github/daiqile96/OTTERS_paper"}, {"uid": "github/EdoardoCarlesi/cmbeasy", "html_url": "https://rseng.github.io/software/repository/github/EdoardoCarlesi/cmbeasy", "api_url": "https://rseng.github.io/software/api/repos/github/EdoardoCarlesi/cmbeasy"}, {"uid": "github/kuanrongchan/COVID19-severity", "html_url": "https://rseng.github.io/software/repository/github/kuanrongchan/COVID19-severity", "api_url": "https://rseng.github.io/software/api/repos/github/kuanrongchan/COVID19-severity"}, {"uid": "github/acbecker/hotpants", "html_url": "https://rseng.github.io/software/repository/github/acbecker/hotpants", "api_url": "https://rseng.github.io/software/api/repos/github/acbecker/hotpants"}, {"uid": "github/tjiangHIT/cuteSV", "html_url": "https://rseng.github.io/software/repository/github/tjiangHIT/cuteSV", "api_url": "https://rseng.github.io/software/api/repos/github/tjiangHIT/cuteSV"}, {"uid": "github/tombisho/dsSyntheticClient", "html_url": "https://rseng.github.io/software/repository/github/tombisho/dsSyntheticClient", "api_url": "https://rseng.github.io/software/api/repos/github/tombisho/dsSyntheticClient"}, {"uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection"}, {"uid": "github/Yash-10/beta-sgp", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/beta-sgp", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/beta-sgp"}, {"uid": "github/xszhu-lab/AGImpute", "html_url": "https://rseng.github.io/software/repository/github/xszhu-lab/AGImpute", "api_url": "https://rseng.github.io/software/api/repos/github/xszhu-lab/AGImpute"}, {"uid": "github/icecube/TauRunner", "html_url": "https://rseng.github.io/software/repository/github/icecube/TauRunner", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/TauRunner"}, {"uid": "github/icecube/toise", "html_url": "https://rseng.github.io/software/repository/github/icecube/toise", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/toise"}, {"uid": "github/icecube/FIRESONG", "html_url": "https://rseng.github.io/software/repository/github/icecube/FIRESONG", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/FIRESONG"}, {"uid": "github/macs3-project/MACS", "html_url": "https://rseng.github.io/software/repository/github/macs3-project/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/macs3-project/MACS"}, {"uid": "github/Kuifje02/vrpy", "html_url": "https://rseng.github.io/software/repository/github/Kuifje02/vrpy", "api_url": "https://rseng.github.io/software/api/repos/github/Kuifje02/vrpy"}, {"uid": "github/COMBINE-lab/RapMap", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/RapMap", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/RapMap"}, {"uid": "github/COMBINE-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/salmon"}, {"uid": "github/COMBINE-lab/terminus", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/terminus", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/terminus"}, {"uid": "github/COMBINE-lab/pufferfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/pufferfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/pufferfish"}, {"uid": "github/COMBINE-lab/simpleaf", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/simpleaf", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/simpleaf"}, {"uid": "github/COMBINE-lab/oarfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/oarfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/oarfish"}, {"uid": "github/COMBINE-lab/libgff", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/libgff", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/libgff"}, {"uid": "github/COMBINE-lab/alevin-fry", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/alevin-fry", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/alevin-fry"}, {"uid": "github/COMBINE-lab/cuttlefish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/cuttlefish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/cuttlefish"}, {"uid": "github/matta-research-group/SwiftPol", "html_url": "https://rseng.github.io/software/repository/github/matta-research-group/SwiftPol", "api_url": "https://rseng.github.io/software/api/repos/github/matta-research-group/SwiftPol"}, {"uid": "github/RafaelSdeSouza/capivara", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/capivara", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/capivara"}, {"uid": "github/RafaelSdeSouza/qrpca", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/qrpca", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/qrpca"}, {"uid": "github/qiankunzizairen/PanGIA", "html_url": "https://rseng.github.io/software/repository/github/qiankunzizairen/PanGIA", "api_url": "https://rseng.github.io/software/api/repos/github/qiankunzizairen/PanGIA"}, {"uid": "github/alesantuz/musclesyneRgies", "html_url": "https://rseng.github.io/software/repository/github/alesantuz/musclesyneRgies", "api_url": "https://rseng.github.io/software/api/repos/github/alesantuz/musclesyneRgies"}, {"uid": "github/bd-j/prospector", "html_url": "https://rseng.github.io/software/repository/github/bd-j/prospector", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/prospector"}, {"uid": "github/bd-j/sedpy", "html_url": "https://rseng.github.io/software/repository/github/bd-j/sedpy", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/sedpy"}, {"uid": "github/bd-j/forcepho", "html_url": "https://rseng.github.io/software/repository/github/bd-j/forcepho", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/forcepho"}, {"uid": "github/lczech/gappa", "html_url": "https://rseng.github.io/software/repository/github/lczech/gappa", "api_url": "https://rseng.github.io/software/api/repos/github/lczech/gappa"}, {"uid": "github/devanshkv/fetch", "html_url": "https://rseng.github.io/software/repository/github/devanshkv/fetch", "api_url": "https://rseng.github.io/software/api/repos/github/devanshkv/fetch"}, {"uid": "github/robdjeff/eagles", "html_url": "https://rseng.github.io/software/repository/github/robdjeff/eagles", "api_url": "https://rseng.github.io/software/api/repos/github/robdjeff/eagles"}, {"uid": "github/mcataneo/pyLDT-cosmo", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/pyLDT-cosmo", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/pyLDT-cosmo"}, {"uid": "github/mcataneo/mochi_class_public", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/mochi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/mochi_class_public"}, {"uid": "github/raddleverse/MimiBRICK.jl", "html_url": "https://rseng.github.io/software/repository/github/raddleverse/MimiBRICK.jl", "api_url": "https://rseng.github.io/software/api/repos/github/raddleverse/MimiBRICK.jl"}, {"uid": "github/cdanielmachado/reframed", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/reframed", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/reframed"}, {"uid": "github/cdanielmachado/carveme", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/carveme", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/carveme"}, {"uid": "github/HeracleBT/vEMstitch", "html_url": "https://rseng.github.io/software/repository/github/HeracleBT/vEMstitch", "api_url": "https://rseng.github.io/software/api/repos/github/HeracleBT/vEMstitch"}, {"uid": "github/daehwankimlab/hisat2", "html_url": "https://rseng.github.io/software/repository/github/daehwankimlab/hisat2", "api_url": "https://rseng.github.io/software/api/repos/github/daehwankimlab/hisat2"}, {"uid": "github/CHRF-Genomics/Paratype", "html_url": "https://rseng.github.io/software/repository/github/CHRF-Genomics/Paratype", "api_url": "https://rseng.github.io/software/api/repos/github/CHRF-Genomics/Paratype"}, {"uid": "github/smeingast/PNICER", "html_url": "https://rseng.github.io/software/repository/github/smeingast/PNICER", "api_url": "https://rseng.github.io/software/api/repos/github/smeingast/PNICER"}, {"uid": "github/Sulstice/cocktail-shaker", "html_url": "https://rseng.github.io/software/repository/github/Sulstice/cocktail-shaker", "api_url": "https://rseng.github.io/software/api/repos/github/Sulstice/cocktail-shaker"}, {"uid": "github/cdominik/optool", "html_url": "https://rseng.github.io/software/repository/github/cdominik/optool", "api_url": "https://rseng.github.io/software/api/repos/github/cdominik/optool"}, {"uid": "github/PEJpOhno/SMiPoly", "html_url": "https://rseng.github.io/software/repository/github/PEJpOhno/SMiPoly", "api_url": "https://rseng.github.io/software/api/repos/github/PEJpOhno/SMiPoly"}, {"uid": "github/youngkaneda/DemeterWatch", "html_url": "https://rseng.github.io/software/repository/github/youngkaneda/DemeterWatch", "api_url": "https://rseng.github.io/software/api/repos/github/youngkaneda/DemeterWatch"}, {"uid": "github/zblz/naima", "html_url": "https://rseng.github.io/software/repository/github/zblz/naima", "api_url": "https://rseng.github.io/software/api/repos/github/zblz/naima"}, {"uid": "github/QibangLiu/PDLSM-FEM_mpi", "html_url": "https://rseng.github.io/software/repository/github/QibangLiu/PDLSM-FEM_mpi", "api_url": "https://rseng.github.io/software/api/repos/github/QibangLiu/PDLSM-FEM_mpi"}, {"uid": "github/danmoser/pyhdust", "html_url": "https://rseng.github.io/software/repository/github/danmoser/pyhdust", "api_url": "https://rseng.github.io/software/api/repos/github/danmoser/pyhdust"}, {"uid": "github/kegiljarhus/pyBEMT", "html_url": "https://rseng.github.io/software/repository/github/kegiljarhus/pyBEMT", "api_url": "https://rseng.github.io/software/api/repos/github/kegiljarhus/pyBEMT"}, {"uid": "github/probml/dynamax", "html_url": "https://rseng.github.io/software/repository/github/probml/dynamax", "api_url": "https://rseng.github.io/software/api/repos/github/probml/dynamax"}, {"uid": "github/ComtekAdvancedStructures/cmstatr", "html_url": "https://rseng.github.io/software/repository/github/ComtekAdvancedStructures/cmstatr", "api_url": "https://rseng.github.io/software/api/repos/github/ComtekAdvancedStructures/cmstatr"}, {"uid": "github/BIMSBbioinfo/pigx_rnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_rnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_rnaseq"}, {"uid": "github/BIMSBbioinfo/pigx_scrnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_scrnaseq"}, {"uid": "github/Jeremycouturier/NcorpiON", "html_url": "https://rseng.github.io/software/repository/github/Jeremycouturier/NcorpiON", "api_url": "https://rseng.github.io/software/api/repos/github/Jeremycouturier/NcorpiON"}, {"uid": "github/ghislainv/forestatrisk", "html_url": "https://rseng.github.io/software/repository/github/ghislainv/forestatrisk", "api_url": "https://rseng.github.io/software/api/repos/github/ghislainv/forestatrisk"}, {"uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar"}, {"uid": "github/DreamCloud-Project/McSim-TLM-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-TLM-NoC"}, {"uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-SimGrid"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-NoC"}, {"uid": "github/ska-sa/katdal", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/katdal", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/katdal"}, {"uid": "github/ska-sa/hibayes", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/hibayes", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/hibayes"}, {"uid": "github/artis-mcrt/artis", "html_url": "https://rseng.github.io/software/repository/github/artis-mcrt/artis", "api_url": "https://rseng.github.io/software/api/repos/github/artis-mcrt/artis"}, {"uid": "github/vanheeringen-lab/gimmemotifs", "html_url": "https://rseng.github.io/software/repository/github/vanheeringen-lab/gimmemotifs", "api_url": "https://rseng.github.io/software/api/repos/github/vanheeringen-lab/gimmemotifs"}, {"uid": "github/IRCAD/camp", "html_url": "https://rseng.github.io/software/repository/github/IRCAD/camp", "api_url": "https://rseng.github.io/software/api/repos/github/IRCAD/camp"}, {"uid": "github/constantAmateur/SoupX", "html_url": "https://rseng.github.io/software/repository/github/constantAmateur/SoupX", "api_url": "https://rseng.github.io/software/api/repos/github/constantAmateur/SoupX"}, {"uid": "github/rfeldmann/leopy", "html_url": "https://rseng.github.io/software/repository/github/rfeldmann/leopy", "api_url": "https://rseng.github.io/software/api/repos/github/rfeldmann/leopy"}, {"uid": "github/pmoulos/metaseqR2", "html_url": "https://rseng.github.io/software/repository/github/pmoulos/metaseqR2", "api_url": "https://rseng.github.io/software/api/repos/github/pmoulos/metaseqR2"}, {"uid": "github/he2016012996/CABnet", "html_url": "https://rseng.github.io/software/repository/github/he2016012996/CABnet", "api_url": "https://rseng.github.io/software/api/repos/github/he2016012996/CABnet"}, {"uid": "github/pharo-project/pharo", "html_url": "https://rseng.github.io/software/repository/github/pharo-project/pharo", "api_url": "https://rseng.github.io/software/api/repos/github/pharo-project/pharo"}, {"uid": "github/bthorne93/PySM_public", "html_url": "https://rseng.github.io/software/repository/github/bthorne93/PySM_public", "api_url": "https://rseng.github.io/software/api/repos/github/bthorne93/PySM_public"}, {"uid": "github/IAMconsortium/pyam", "html_url": "https://rseng.github.io/software/repository/github/IAMconsortium/pyam", "api_url": "https://rseng.github.io/software/api/repos/github/IAMconsortium/pyam"}, {"uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", "html_url": "https://rseng.github.io/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", "api_url": "https://rseng.github.io/software/api/repos/github/Aarhus-Psychiatry-Research/timeseriesflattener"}, {"uid": "github/isovic/graphmap", "html_url": "https://rseng.github.io/software/repository/github/isovic/graphmap", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/graphmap"}, {"uid": "github/isovic/racon", "html_url": "https://rseng.github.io/software/repository/github/isovic/racon", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/racon"}, {"uid": "github/erling6232/imagedata", "html_url": "https://rseng.github.io/software/repository/github/erling6232/imagedata", "api_url": "https://rseng.github.io/software/api/repos/github/erling6232/imagedata"}, {"uid": "github/refresh-bio/agc", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/agc", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/agc"}, {"uid": "github/refresh-bio/whisper", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/whisper", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/whisper"}, {"uid": "github/RaRe-Technologies/gensim", "html_url": "https://rseng.github.io/software/repository/github/RaRe-Technologies/gensim", "api_url": "https://rseng.github.io/software/api/repos/github/RaRe-Technologies/gensim"}, {"uid": "github/telegraphic/fits2hdf", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/fits2hdf", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/fits2hdf"}, {"uid": "github/telegraphic/pygsm", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/pygsm", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/pygsm"}, {"uid": "github/STAR-Fusion/STAR-Fusion", "html_url": "https://rseng.github.io/software/repository/github/STAR-Fusion/STAR-Fusion", "api_url": "https://rseng.github.io/software/api/repos/github/STAR-Fusion/STAR-Fusion"}, {"uid": "github/MASILab/pyPheWAS", "html_url": "https://rseng.github.io/software/repository/github/MASILab/pyPheWAS", "api_url": "https://rseng.github.io/software/api/repos/github/MASILab/pyPheWAS"}, {"uid": "github/suneeshjacob/ACRoD", "html_url": "https://rseng.github.io/software/repository/github/suneeshjacob/ACRoD", "api_url": "https://rseng.github.io/software/api/repos/github/suneeshjacob/ACRoD"}, {"uid": "github/clawpack/pyclaw", "html_url": "https://rseng.github.io/software/repository/github/clawpack/pyclaw", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/pyclaw"}, {"uid": "github/clawpack/clawpack", "html_url": "https://rseng.github.io/software/repository/github/clawpack/clawpack", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/clawpack"}, {"uid": "github/kylejgillett/sounderpy", "html_url": "https://rseng.github.io/software/repository/github/kylejgillett/sounderpy", "api_url": "https://rseng.github.io/software/api/repos/github/kylejgillett/sounderpy"}, {"uid": "github/econ-ark/HARK", "html_url": "https://rseng.github.io/software/repository/github/econ-ark/HARK", "api_url": "https://rseng.github.io/software/api/repos/github/econ-ark/HARK"}, {"uid": "github/poissonconsulting/bbousuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bbousuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bbousuite"}, {"uid": "github/poissonconsulting/bisonpicsuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bisonpicsuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bisonpicsuite"}, {"uid": "github/pyiron/executorlib", "html_url": "https://rseng.github.io/software/repository/github/pyiron/executorlib", "api_url": "https://rseng.github.io/software/api/repos/github/pyiron/executorlib"}, {"uid": "github/Deyht/CIANNA", "html_url": "https://rseng.github.io/software/repository/github/Deyht/CIANNA", "api_url": "https://rseng.github.io/software/api/repos/github/Deyht/CIANNA"}, {"uid": "github/pyranges/pyrle", "html_url": "https://rseng.github.io/software/repository/github/pyranges/pyrle", "api_url": "https://rseng.github.io/software/api/repos/github/pyranges/pyrle"}, {"uid": "github/SeamusClarke/FragMent", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/FragMent", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/FragMent"}, {"uid": "github/SeamusClarke/BTS", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/BTS", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/BTS"}, {"uid": "github/linDing-groups/Deep-4mCW2V", "html_url": "https://rseng.github.io/software/repository/github/linDing-groups/Deep-4mCW2V", "api_url": "https://rseng.github.io/software/api/repos/github/linDing-groups/Deep-4mCW2V"}, {"uid": "github/timchurches/NetEpi-Collection", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Collection", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Collection"}, {"uid": "github/timchurches/NetEpi-Analysis", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Analysis"}, {"uid": "github/johnlees/pp-sketchlib", "html_url": "https://rseng.github.io/software/repository/github/johnlees/pp-sketchlib", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/pp-sketchlib"}, {"uid": "github/johnlees/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/johnlees/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/PopPUNK"}, {"uid": "github/johnlees/seer", "html_url": "https://rseng.github.io/software/repository/github/johnlees/seer", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/seer"}, {"uid": "github/dh4gan/taktent", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/taktent", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/taktent"}, {"uid": "github/dh4gan/oberon", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/oberon", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/oberon"}, {"uid": "github/dh4gan/grapus", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/grapus", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/grapus"}, {"uid": "github/dh4gan/tache", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/tache", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/tache"}, {"uid": "github/ynop/audiomate", "html_url": "https://rseng.github.io/software/repository/github/ynop/audiomate", "api_url": "https://rseng.github.io/software/api/repos/github/ynop/audiomate"}, {"uid": "github/folsomcp/specpolFlow", "html_url": "https://rseng.github.io/software/repository/github/folsomcp/specpolFlow", "api_url": "https://rseng.github.io/software/api/repos/github/folsomcp/specpolFlow"}, {"uid": "github/PENTACLE-Team/PENTACLE", "html_url": "https://rseng.github.io/software/repository/github/PENTACLE-Team/PENTACLE", "api_url": "https://rseng.github.io/software/api/repos/github/PENTACLE-Team/PENTACLE"}, {"uid": "github/riogroup/SORA", "html_url": "https://rseng.github.io/software/repository/github/riogroup/SORA", "api_url": "https://rseng.github.io/software/api/repos/github/riogroup/SORA"}, {"uid": "github/parsotat/batanalysis", "html_url": "https://rseng.github.io/software/repository/github/parsotat/batanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/parsotat/batanalysis"}, {"uid": "github/sherpa-deproject/deproject", "html_url": "https://rseng.github.io/software/repository/github/sherpa-deproject/deproject", "api_url": "https://rseng.github.io/software/api/repos/github/sherpa-deproject/deproject"}, {"uid": "github/VILLASframework/node", "html_url": "https://rseng.github.io/software/repository/github/VILLASframework/node", "api_url": "https://rseng.github.io/software/api/repos/github/VILLASframework/node"}, {"uid": "github/tingyuansen/The_Payne", "html_url": "https://rseng.github.io/software/repository/github/tingyuansen/The_Payne", "api_url": "https://rseng.github.io/software/api/repos/github/tingyuansen/The_Payne"}, {"uid": "github/nksaunders/giants", "html_url": "https://rseng.github.io/software/repository/github/nksaunders/giants", "api_url": "https://rseng.github.io/software/api/repos/github/nksaunders/giants"}, {"uid": "github/kathrinnp/DarkRayNet", "html_url": "https://rseng.github.io/software/repository/github/kathrinnp/DarkRayNet", "api_url": "https://rseng.github.io/software/api/repos/github/kathrinnp/DarkRayNet"}, {"uid": "github/Nicole-DH/ACP-MLC", "html_url": "https://rseng.github.io/software/repository/github/Nicole-DH/ACP-MLC", "api_url": "https://rseng.github.io/software/api/repos/github/Nicole-DH/ACP-MLC"}, {"uid": "github/nathandecaux/labelprop", "html_url": "https://rseng.github.io/software/repository/github/nathandecaux/labelprop", "api_url": "https://rseng.github.io/software/api/repos/github/nathandecaux/labelprop"}, {"uid": "github/Jacks0nJ/PyFPT", "html_url": "https://rseng.github.io/software/repository/github/Jacks0nJ/PyFPT", "api_url": "https://rseng.github.io/software/api/repos/github/Jacks0nJ/PyFPT"}, {"uid": "github/fjprichard/PyAFBF", "html_url": "https://rseng.github.io/software/repository/github/fjprichard/PyAFBF", "api_url": "https://rseng.github.io/software/api/repos/github/fjprichard/PyAFBF"}, {"uid": "github/scikit-learn/scikit-learn", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn/scikit-learn", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn/scikit-learn"}, {"uid": "github/aiidateam/aiida-core", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/aiida-core", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/aiida-core"}, {"uid": "github/aiidateam/kiwipy", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/kiwipy", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/kiwipy"}, {"uid": "github/markmbaum/GEOCLIM.jl", "html_url": "https://rseng.github.io/software/repository/github/markmbaum/GEOCLIM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/markmbaum/GEOCLIM.jl"}, {"uid": "github/torrance/pigi", "html_url": "https://rseng.github.io/software/repository/github/torrance/pigi", "api_url": "https://rseng.github.io/software/api/repos/github/torrance/pigi"}, {"uid": "github/m-d-grunnill/MetaCast", "html_url": "https://rseng.github.io/software/repository/github/m-d-grunnill/MetaCast", "api_url": "https://rseng.github.io/software/api/repos/github/m-d-grunnill/MetaCast"}, {"uid": "github/FINNGEN/lavaa-react", "html_url": "https://rseng.github.io/software/repository/github/FINNGEN/lavaa-react", "api_url": "https://rseng.github.io/software/api/repos/github/FINNGEN/lavaa-react"}, {"uid": "github/vmplacco/linemake", "html_url": "https://rseng.github.io/software/repository/github/vmplacco/linemake", "api_url": "https://rseng.github.io/software/api/repos/github/vmplacco/linemake"}, {"uid": "github/vals/umis", "html_url": "https://rseng.github.io/software/repository/github/vals/umis", "api_url": "https://rseng.github.io/software/api/repos/github/vals/umis"}, {"uid": "github/low-sky/cprops", "html_url": "https://rseng.github.io/software/repository/github/low-sky/cprops", "api_url": "https://rseng.github.io/software/api/repos/github/low-sky/cprops"}, {"uid": "github/EvolOMICS-TU/ETENLNC", "html_url": "https://rseng.github.io/software/repository/github/EvolOMICS-TU/ETENLNC", "api_url": "https://rseng.github.io/software/api/repos/github/EvolOMICS-TU/ETENLNC"}, {"uid": "github/kellino/DiscreteEntropy.jl", "html_url": "https://rseng.github.io/software/repository/github/kellino/DiscreteEntropy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kellino/DiscreteEntropy.jl"}, {"uid": "github/ajohnson-uoregon/llvm-project", "html_url": "https://rseng.github.io/software/repository/github/ajohnson-uoregon/llvm-project", "api_url": "https://rseng.github.io/software/api/repos/github/ajohnson-uoregon/llvm-project"}, {"uid": "github/zpliulab/GENELink", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GENELink", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GENELink"}, {"uid": "github/zpliulab/GeoBind", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GeoBind", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GeoBind"}, {"uid": "github/HofstadterTools/HofstadterTools", "html_url": "https://rseng.github.io/software/repository/github/HofstadterTools/HofstadterTools", "api_url": "https://rseng.github.io/software/api/repos/github/HofstadterTools/HofstadterTools"}, {"uid": "github/KULL-Centre/DEERpredict", "html_url": "https://rseng.github.io/software/repository/github/KULL-Centre/DEERpredict", "api_url": "https://rseng.github.io/software/api/repos/github/KULL-Centre/DEERpredict"}, {"uid": "github/alexfields/ORF-RATER", "html_url": "https://rseng.github.io/software/repository/github/alexfields/ORF-RATER", "api_url": "https://rseng.github.io/software/api/repos/github/alexfields/ORF-RATER"}, {"uid": "github/mncrowe/QGDipoles.jl", "html_url": "https://rseng.github.io/software/repository/github/mncrowe/QGDipoles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mncrowe/QGDipoles.jl"}, {"uid": "github/JakobRoche/OCSVM-Transit-Detection", "html_url": "https://rseng.github.io/software/repository/github/JakobRoche/OCSVM-Transit-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/JakobRoche/OCSVM-Transit-Detection"}, {"uid": "github/octapps/octapps", "html_url": "https://rseng.github.io/software/repository/github/octapps/octapps", "api_url": "https://rseng.github.io/software/api/repos/github/octapps/octapps"}, {"uid": "github/walaj/svaba", "html_url": "https://rseng.github.io/software/repository/github/walaj/svaba", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/svaba"}, {"uid": "github/walaj/SeqLib", "html_url": "https://rseng.github.io/software/repository/github/walaj/SeqLib", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/SeqLib"}, {"uid": "github/hsinnan75/MapCaller", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/MapCaller", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/MapCaller"}, {"uid": "github/hsinnan75/GSAlign", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/GSAlign", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/GSAlign"}, {"uid": "github/dmitryduev/penquins", "html_url": "https://rseng.github.io/software/repository/github/dmitryduev/penquins", "api_url": "https://rseng.github.io/software/api/repos/github/dmitryduev/penquins"}, {"uid": "github/leonardlab/COMET", "html_url": "https://rseng.github.io/software/repository/github/leonardlab/COMET", "api_url": "https://rseng.github.io/software/api/repos/github/leonardlab/COMET"}, {"uid": "github/Xomics/ACTIONdemonstrator_workflow", "html_url": "https://rseng.github.io/software/repository/github/Xomics/ACTIONdemonstrator_workflow", "api_url": "https://rseng.github.io/software/api/repos/github/Xomics/ACTIONdemonstrator_workflow"}, {"uid": "github/daniellefenech/SERPent", "html_url": "https://rseng.github.io/software/repository/github/daniellefenech/SERPent", "api_url": "https://rseng.github.io/software/api/repos/github/daniellefenech/SERPent"}, {"uid": "github/symmy596/SurfinPy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/SurfinPy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/SurfinPy"}, {"uid": "github/symmy596/Polypy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/Polypy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/Polypy"}, {"uid": "github/akdeniz-uzay/A-Track", "html_url": "https://rseng.github.io/software/repository/github/akdeniz-uzay/A-Track", "api_url": "https://rseng.github.io/software/api/repos/github/akdeniz-uzay/A-Track"}, {"uid": "github/RajLabMSSM/echolocatoR", "html_url": "https://rseng.github.io/software/repository/github/RajLabMSSM/echolocatoR", "api_url": "https://rseng.github.io/software/api/repos/github/RajLabMSSM/echolocatoR"}, {"uid": "github/felipeelorrieta/IAR_Model", "html_url": "https://rseng.github.io/software/repository/github/felipeelorrieta/IAR_Model", "api_url": "https://rseng.github.io/software/api/repos/github/felipeelorrieta/IAR_Model"}, {"uid": "github/cl3425/Clairvoyance", "html_url": "https://rseng.github.io/software/repository/github/cl3425/Clairvoyance", "api_url": "https://rseng.github.io/software/api/repos/github/cl3425/Clairvoyance"}, {"uid": "github/husseinaluie/FlowSieve", "html_url": "https://rseng.github.io/software/repository/github/husseinaluie/FlowSieve", "api_url": "https://rseng.github.io/software/api/repos/github/husseinaluie/FlowSieve"}, {"uid": "github/STOmics/cs-benchmark", "html_url": "https://rseng.github.io/software/repository/github/STOmics/cs-benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/cs-benchmark"}, {"uid": "github/STOmics/EAGS", "html_url": "https://rseng.github.io/software/repository/github/STOmics/EAGS", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/EAGS"}, {"uid": "github/iomega/paired-data-form", "html_url": "https://rseng.github.io/software/repository/github/iomega/paired-data-form", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/paired-data-form"}, {"uid": "github/iomega/spec2vec_gnps_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec_gnps_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec_gnps_data_analysis"}, {"uid": "github/iomega/spec2vec", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec"}, {"uid": "github/iomega/zenodo-upload", "html_url": "https://rseng.github.io/software/repository/github/iomega/zenodo-upload", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/zenodo-upload"}, {"uid": "github/EcoJulia/SimpleSDMLayers.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/SimpleSDMLayers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/SimpleSDMLayers.jl"}, {"uid": "github/EcoJulia/EcologicalNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/EcologicalNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/EcologicalNetworks.jl"}, {"uid": "github/EcoJulia/Microbiome.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/Microbiome.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/Microbiome.jl"}, {"uid": "github/sundarjhu/2-DUST", "html_url": "https://rseng.github.io/software/repository/github/sundarjhu/2-DUST", "api_url": "https://rseng.github.io/software/api/repos/github/sundarjhu/2-DUST"}, {"uid": "github/liniguez/Insplico_simulations", "html_url": "https://rseng.github.io/software/repository/github/liniguez/Insplico_simulations", "api_url": "https://rseng.github.io/software/api/repos/github/liniguez/Insplico_simulations"}, {"uid": "github/JuliaMatrices/LazyBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/LazyBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BlockBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BlockBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BandedMatrices.jl"}, {"uid": "github/elkebir-group/derna", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/derna", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/derna"}, {"uid": "github/elkebir-group/Jumper", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/Jumper", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/Jumper"}, {"uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "html_url": "https://rseng.github.io/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner"}, {"uid": "github/felixbosco/KeplerFit", "html_url": "https://rseng.github.io/software/repository/github/felixbosco/KeplerFit", "api_url": "https://rseng.github.io/software/api/repos/github/felixbosco/KeplerFit"}, {"uid": "github/LSARP/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/LSARP/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/LSARP/ProteomicsQC"}, {"uid": "github/HHTpy/HHTpywrapper", "html_url": "https://rseng.github.io/software/repository/github/HHTpy/HHTpywrapper", "api_url": "https://rseng.github.io/software/api/repos/github/HHTpy/HHTpywrapper"}, {"uid": "github/OxES/k2sc", "html_url": "https://rseng.github.io/software/repository/github/OxES/k2sc", "api_url": "https://rseng.github.io/software/api/repos/github/OxES/k2sc"}, {"uid": "github/WGLab/LongGF", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongGF", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongGF"}, {"uid": "github/WGLab/InterVar", "html_url": "https://rseng.github.io/software/repository/github/WGLab/InterVar", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/InterVar"}, {"uid": "github/WGLab/PhenoGPT2", "html_url": "https://rseng.github.io/software/repository/github/WGLab/PhenoGPT2", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/PhenoGPT2"}, {"uid": "github/WGLab/LongReadSum", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongReadSum", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongReadSum"}, {"uid": "github/YihePang/DisoFLAG", "html_url": "https://rseng.github.io/software/repository/github/YihePang/DisoFLAG", "api_url": "https://rseng.github.io/software/api/repos/github/YihePang/DisoFLAG"}, {"uid": "github/raghuastro/GRIZZLY", "html_url": "https://rseng.github.io/software/repository/github/raghuastro/GRIZZLY", "api_url": "https://rseng.github.io/software/api/repos/github/raghuastro/GRIZZLY"}, {"uid": "github/cbib/decontaminator", "html_url": "https://rseng.github.io/software/repository/github/cbib/decontaminator", "api_url": "https://rseng.github.io/software/api/repos/github/cbib/decontaminator"}, {"uid": "github/Ruiz-HCI-Lab/ggMOB", "html_url": "https://rseng.github.io/software/repository/github/Ruiz-HCI-Lab/ggMOB", "api_url": "https://rseng.github.io/software/api/repos/github/Ruiz-HCI-Lab/ggMOB"}, {"uid": "github/oliverphilcox/RascalC", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/RascalC", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/RascalC"}, {"uid": "github/oliverphilcox/OneLoopBispectrum", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/OneLoopBispectrum", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/OneLoopBispectrum"}, {"uid": "github/oliverphilcox/PolyBin", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin"}, {"uid": "github/oliverphilcox/Spectra-Without-Windows", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Spectra-Without-Windows", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Spectra-Without-Windows"}, {"uid": "github/oliverphilcox/EffectiveHalos", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/EffectiveHalos", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/EffectiveHalos"}, {"uid": "github/oliverphilcox/Keplers-Goat-Herd", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Keplers-Goat-Herd", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Keplers-Goat-Herd"}, {"uid": "github/oliverphilcox/PolyBin3D", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin3D", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin3D"}, {"uid": "github/oliverphilcox/HIPSTER", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HIPSTER", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HIPSTER"}, {"uid": "github/oliverphilcox/HADES", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HADES", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HADES"}, {"uid": "github/oliverphilcox/encore", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/encore", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/encore"}, {"uid": "github/carlodev/SegregatedVMSSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SegregatedVMSSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SegregatedVMSSolver.jl"}, {"uid": "github/carlodev/SyntheticEddyMethod.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SyntheticEddyMethod.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SyntheticEddyMethod.jl"}, {"uid": "github/bwengals/CCSNMultivar", "html_url": "https://rseng.github.io/software/repository/github/bwengals/CCSNMultivar", "api_url": "https://rseng.github.io/software/api/repos/github/bwengals/CCSNMultivar"}, {"uid": "github/LinkedEarth/pylipd", "html_url": "https://rseng.github.io/software/repository/github/LinkedEarth/pylipd", "api_url": "https://rseng.github.io/software/api/repos/github/LinkedEarth/pylipd"}, {"uid": "github/EvolBioInf/phylonium", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/phylonium", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/phylonium"}, {"uid": "github/EvolBioInf/andi", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/andi", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/andi"}, {"uid": "github/combine-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/combine-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/combine-lab/salmon"}, {"uid": "github/tomlouden/spiderman", "html_url": "https://rseng.github.io/software/repository/github/tomlouden/spiderman", "api_url": "https://rseng.github.io/software/api/repos/github/tomlouden/spiderman"}, {"uid": "github/madupite/madupite", "html_url": "https://rseng.github.io/software/repository/github/madupite/madupite", "api_url": "https://rseng.github.io/software/api/repos/github/madupite/madupite"}, {"uid": "github/nell-byler/cloudyfsps", "html_url": "https://rseng.github.io/software/repository/github/nell-byler/cloudyfsps", "api_url": "https://rseng.github.io/software/api/repos/github/nell-byler/cloudyfsps"}, {"uid": "github/donaldRwilliams/GGMnonreg", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/GGMnonreg", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/GGMnonreg"}, {"uid": "github/donaldRwilliams/BGGM", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/BGGM", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/BGGM"}, {"uid": "github/meantrix/corrp", "html_url": "https://rseng.github.io/software/repository/github/meantrix/corrp", "api_url": "https://rseng.github.io/software/api/repos/github/meantrix/corrp"}, {"uid": "github/silkemaes/MACE", "html_url": "https://rseng.github.io/software/repository/github/silkemaes/MACE", "api_url": "https://rseng.github.io/software/api/repos/github/silkemaes/MACE"}, {"uid": "github/fcs-analysis/PyScanFCS", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyScanFCS", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyScanFCS"}, {"uid": "github/fcs-analysis/PyCorrFit", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyCorrFit", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyCorrFit"}, {"uid": "github/SJaffa/Jplots", "html_url": "https://rseng.github.io/software/repository/github/SJaffa/Jplots", "api_url": "https://rseng.github.io/software/api/repos/github/SJaffa/Jplots"}, {"uid": "github/hillerlab/GenomeAlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/hillerlab/GenomeAlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/hillerlab/GenomeAlignmentTools"}, {"uid": "github/ropensci-org/roblog", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/roblog", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/roblog"}, {"uid": "github/ropensci-org/pkgreviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/pkgreviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/pkgreviewr"}, {"uid": "github/ropensci-org/rotemplate", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/rotemplate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/rotemplate"}, {"uid": "github/trinotate/trinotatehub.io", "html_url": "https://rseng.github.io/software/repository/github/trinotate/trinotatehub.io", "api_url": "https://rseng.github.io/software/api/repos/github/trinotate/trinotatehub.io"}, {"uid": "github/atzberg/mlmod", "html_url": "https://rseng.github.io/software/repository/github/atzberg/mlmod", "api_url": "https://rseng.github.io/software/api/repos/github/atzberg/mlmod"}, {"uid": "github/kyleaoman/martini", "html_url": "https://rseng.github.io/software/repository/github/kyleaoman/martini", "api_url": "https://rseng.github.io/software/api/repos/github/kyleaoman/martini"}, {"uid": "github/EGaraldi/corecon", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/corecon", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/corecon"}, {"uid": "github/EGaraldi/ZInCo", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/ZInCo", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/ZInCo"}, {"uid": "github/mdsufz/MuDoGeR", "html_url": "https://rseng.github.io/software/repository/github/mdsufz/MuDoGeR", "api_url": "https://rseng.github.io/software/api/repos/github/mdsufz/MuDoGeR"}, {"uid": "github/fizban007/Aperture4", "html_url": "https://rseng.github.io/software/repository/github/fizban007/Aperture4", "api_url": "https://rseng.github.io/software/api/repos/github/fizban007/Aperture4"}, {"uid": "github/dblaschke-LANL/PyDislocDyn", "html_url": "https://rseng.github.io/software/repository/github/dblaschke-LANL/PyDislocDyn", "api_url": "https://rseng.github.io/software/api/repos/github/dblaschke-LANL/PyDislocDyn"}, {"uid": "github/ronnyerrmann/HiFLEx", "html_url": "https://rseng.github.io/software/repository/github/ronnyerrmann/HiFLEx", "api_url": "https://rseng.github.io/software/api/repos/github/ronnyerrmann/HiFLEx"}, {"uid": "github/Kaixhin/Autoencoders", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Autoencoders", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Autoencoders"}, {"uid": "github/Kaixhin/spinning-up-basic", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/spinning-up-basic", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/spinning-up-basic"}, {"uid": "github/Kaixhin/dockerfiles", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/dockerfiles", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/dockerfiles"}, {"uid": "github/Kaixhin/FGLab", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGLab", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGLab"}, {"uid": "github/Kaixhin/Atari", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Atari", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Atari"}, {"uid": "github/Kaixhin/Rainbow", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Rainbow", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Rainbow"}, {"uid": "github/Kaixhin/FGMachine", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGMachine", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGMachine"}, {"uid": "github/Kaixhin/PlaNet", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/PlaNet", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/PlaNet"}, {"uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "html_url": "https://rseng.github.io/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "api_url": "https://rseng.github.io/software/api/repos/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids"}, {"uid": "github/gem-pasteur/Integron_Finder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/Integron_Finder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/Integron_Finder"}, {"uid": "github/gem-pasteur/macsylib", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsylib", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsylib"}, {"uid": "github/gem-pasteur/macsyfinder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsyfinder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsyfinder"}, {"uid": "github/kiyo-masui/bitshuffle", "html_url": "https://rseng.github.io/software/repository/github/kiyo-masui/bitshuffle", "api_url": "https://rseng.github.io/software/api/repos/github/kiyo-masui/bitshuffle"}, {"uid": "github/jfwallin/JSPAM", "html_url": "https://rseng.github.io/software/repository/github/jfwallin/JSPAM", "api_url": "https://rseng.github.io/software/api/repos/github/jfwallin/JSPAM"}, {"uid": "github/NGSolve/ngsPETSc", "html_url": "https://rseng.github.io/software/repository/github/NGSolve/ngsPETSc", "api_url": "https://rseng.github.io/software/api/repos/github/NGSolve/ngsPETSc"}, {"uid": "github/yuhaoran/CUBE", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE"}, {"uid": "github/blebon/directChillFoam", "html_url": "https://rseng.github.io/software/repository/github/blebon/directChillFoam", "api_url": "https://rseng.github.io/software/api/repos/github/blebon/directChillFoam"}, {"uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefmath/SurfaceWaterIntegratedModeling.jl"}, {"uid": "github/Hegghammer/daiR", "html_url": "https://rseng.github.io/software/repository/github/Hegghammer/daiR", "api_url": "https://rseng.github.io/software/api/repos/github/Hegghammer/daiR"}, {"uid": "github/Martin-Fahrenberger/GTestimate", "html_url": "https://rseng.github.io/software/repository/github/Martin-Fahrenberger/GTestimate", "api_url": "https://rseng.github.io/software/api/repos/github/Martin-Fahrenberger/GTestimate"}, {"uid": "github/EigenDev/simbi", "html_url": "https://rseng.github.io/software/repository/github/EigenDev/simbi", "api_url": "https://rseng.github.io/software/api/repos/github/EigenDev/simbi"}, {"uid": "github/Sheng-Qi-Yang/HIILines", "html_url": "https://rseng.github.io/software/repository/github/Sheng-Qi-Yang/HIILines", "api_url": "https://rseng.github.io/software/api/repos/github/Sheng-Qi-Yang/HIILines"}, {"uid": "github/chainsawriot/sweater", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/sweater", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/sweater"}, {"uid": "github/chainsawriot/oolong", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/oolong", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/oolong"}, {"uid": "github/threeML/threeML", "html_url": "https://rseng.github.io/software/repository/github/threeML/threeML", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/threeML"}, {"uid": "github/threeML/astromodels", "html_url": "https://rseng.github.io/software/repository/github/threeML/astromodels", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/astromodels"}, {"uid": "github/jakevdp/wpca", "html_url": "https://rseng.github.io/software/repository/github/jakevdp/wpca", "api_url": "https://rseng.github.io/software/api/repos/github/jakevdp/wpca"}, {"uid": "github/exomishra/kobe", "html_url": "https://rseng.github.io/software/repository/github/exomishra/kobe", "api_url": "https://rseng.github.io/software/api/repos/github/exomishra/kobe"}, {"uid": "github/johnveitch/cpnest", "html_url": "https://rseng.github.io/software/repository/github/johnveitch/cpnest", "api_url": "https://rseng.github.io/software/api/repos/github/johnveitch/cpnest"}, {"uid": "github/NBISweden/AGAT", "html_url": "https://rseng.github.io/software/repository/github/NBISweden/AGAT", "api_url": "https://rseng.github.io/software/api/repos/github/NBISweden/AGAT"}, {"uid": "github/GabrielaCR/AGNfitter", "html_url": "https://rseng.github.io/software/repository/github/GabrielaCR/AGNfitter", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielaCR/AGNfitter"}, {"uid": "github/sstadick/perbase", "html_url": "https://rseng.github.io/software/repository/github/sstadick/perbase", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/perbase"}, {"uid": "github/sstadick/crabz", "html_url": "https://rseng.github.io/software/repository/github/sstadick/crabz", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/crabz"}, {"uid": "github/bhhua/vacuumtunneling", "html_url": "https://rseng.github.io/software/repository/github/bhhua/vacuumtunneling", "api_url": "https://rseng.github.io/software/api/repos/github/bhhua/vacuumtunneling"}, {"uid": "github/caseyjlaw/tpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/tpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/tpipe"}, {"uid": "github/caseyjlaw/rtpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/rtpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/rtpipe"}, {"uid": "github/sbmlteam/moccasin", "html_url": "https://rseng.github.io/software/repository/github/sbmlteam/moccasin", "api_url": "https://rseng.github.io/software/api/repos/github/sbmlteam/moccasin"}, {"uid": "github/pierrepeterlongo/back_to_sequences", "html_url": "https://rseng.github.io/software/repository/github/pierrepeterlongo/back_to_sequences", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepeterlongo/back_to_sequences"}, {"uid": "github/MaudeDavidLab/GMEmbeddings", "html_url": "https://rseng.github.io/software/repository/github/MaudeDavidLab/GMEmbeddings", "api_url": "https://rseng.github.io/software/api/repos/github/MaudeDavidLab/GMEmbeddings"}, {"uid": "github/everval/LongMemory.jl", "html_url": "https://rseng.github.io/software/repository/github/everval/LongMemory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/everval/LongMemory.jl"}, {"uid": "github/EhsanGharibNezhad/TelescopeML", "html_url": "https://rseng.github.io/software/repository/github/EhsanGharibNezhad/TelescopeML", "api_url": "https://rseng.github.io/software/api/repos/github/EhsanGharibNezhad/TelescopeML"}, {"uid": "github/TRASAL/psrdada-python", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/psrdada-python", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/psrdada-python"}, {"uid": "github/TRASAL/AMBER", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/AMBER"}, {"uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/ETHOS_PeNALPS"}, {"uid": "github/FZJ-IEK3-VSA/FINE", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/FINE", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/FINE"}, {"uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/LoadProfileGenerator"}, {"uid": "github/sczesla/PyAstronomy", "html_url": "https://rseng.github.io/software/repository/github/sczesla/PyAstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sczesla/PyAstronomy"}, {"uid": "github/cblakeastro/intensitypower", "html_url": "https://rseng.github.io/software/repository/github/cblakeastro/intensitypower", "api_url": "https://rseng.github.io/software/api/repos/github/cblakeastro/intensitypower"}, {"uid": "github/vterron/lemon", "html_url": "https://rseng.github.io/software/repository/github/vterron/lemon", "api_url": "https://rseng.github.io/software/api/repos/github/vterron/lemon"}, {"uid": "github/isaackd/wcloud", "html_url": "https://rseng.github.io/software/repository/github/isaackd/wcloud", "api_url": "https://rseng.github.io/software/api/repos/github/isaackd/wcloud"}, {"uid": "github/pacificbiosciences/bam2fastx", "html_url": "https://rseng.github.io/software/repository/github/pacificbiosciences/bam2fastx", "api_url": "https://rseng.github.io/software/api/repos/github/pacificbiosciences/bam2fastx"}, {"uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/cookiecutter-cdp-deployment"}, {"uid": "github/CouncilDataProject/speakerbox", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/speakerbox", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/speakerbox"}, {"uid": "github/phenology/cgc", "html_url": "https://rseng.github.io/software/repository/github/phenology/cgc", "api_url": "https://rseng.github.io/software/api/repos/github/phenology/cgc"}, {"uid": "github/NREL/G2Aero", "html_url": "https://rseng.github.io/software/repository/github/NREL/G2Aero", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/G2Aero"}, {"uid": "github/NREL/VirtualEngineering", "html_url": "https://rseng.github.io/software/repository/github/NREL/VirtualEngineering", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/VirtualEngineering"}, {"uid": "github/NREL/graph-env", "html_url": "https://rseng.github.io/software/repository/github/NREL/graph-env", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/graph-env"}, {"uid": "github/NREL/OpenOA", "html_url": "https://rseng.github.io/software/repository/github/NREL/OpenOA", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/OpenOA"}, {"uid": "github/epic-astronomy/EPIC", "html_url": "https://rseng.github.io/software/repository/github/epic-astronomy/EPIC", "api_url": "https://rseng.github.io/software/api/repos/github/epic-astronomy/EPIC"}, {"uid": "github/BodeTobias/AutoPDEx", "html_url": "https://rseng.github.io/software/repository/github/BodeTobias/AutoPDEx", "api_url": "https://rseng.github.io/software/api/repos/github/BodeTobias/AutoPDEx"}, {"uid": "github/m2aia/m2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/m2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/m2aia"}, {"uid": "github/m2aia/pym2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/pym2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/pym2aia"}, {"uid": "github/AshleySpindler/AstroVaDEr-Public", "html_url": "https://rseng.github.io/software/repository/github/AshleySpindler/AstroVaDEr-Public", "api_url": "https://rseng.github.io/software/api/repos/github/AshleySpindler/AstroVaDEr-Public"}, {"uid": "github/mlares/hearsay", "html_url": "https://rseng.github.io/software/repository/github/mlares/hearsay", "api_url": "https://rseng.github.io/software/api/repos/github/mlares/hearsay"}, {"uid": "github/MesquiteProject/MesquiteCore", "html_url": "https://rseng.github.io/software/repository/github/MesquiteProject/MesquiteCore", "api_url": "https://rseng.github.io/software/api/repos/github/MesquiteProject/MesquiteCore"}, {"uid": "github/andreasmang/claire", "html_url": "https://rseng.github.io/software/repository/github/andreasmang/claire", "api_url": "https://rseng.github.io/software/api/repos/github/andreasmang/claire"}, {"uid": "github/lys-devel/lys", "html_url": "https://rseng.github.io/software/repository/github/lys-devel/lys", "api_url": "https://rseng.github.io/software/api/repos/github/lys-devel/lys"}, {"uid": "github/bharathramh/STRIDE-DB_Codes", "html_url": "https://rseng.github.io/software/repository/github/bharathramh/STRIDE-DB_Codes", "api_url": "https://rseng.github.io/software/api/repos/github/bharathramh/STRIDE-DB_Codes"}, {"uid": "github/s4hts/HTStream", "html_url": "https://rseng.github.io/software/repository/github/s4hts/HTStream", "api_url": "https://rseng.github.io/software/api/repos/github/s4hts/HTStream"}, {"uid": "github/NCIP/visda", "html_url": "https://rseng.github.io/software/repository/github/NCIP/visda", "api_url": "https://rseng.github.io/software/api/repos/github/NCIP/visda"}, {"uid": "github/herrsalmi/FConverter", "html_url": "https://rseng.github.io/software/repository/github/herrsalmi/FConverter", "api_url": "https://rseng.github.io/software/api/repos/github/herrsalmi/FConverter"}, {"uid": "github/andresmegias/gildas-class-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/gildas-class-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/gildas-class-python"}, {"uid": "github/andresmegias/richvalues", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/richvalues", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/richvalues"}, {"uid": "github/andresmegias/radex-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/radex-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/radex-python"}, {"uid": "github/DReichLab/EIG", "html_url": "https://rseng.github.io/software/repository/github/DReichLab/EIG", "api_url": "https://rseng.github.io/software/api/repos/github/DReichLab/EIG"}, {"uid": "github/TARGENE/TMLE.jl", "html_url": "https://rseng.github.io/software/repository/github/TARGENE/TMLE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TARGENE/TMLE.jl"}, {"uid": "github/tlambert03/pycudadecon", "html_url": "https://rseng.github.io/software/repository/github/tlambert03/pycudadecon", "api_url": "https://rseng.github.io/software/api/repos/github/tlambert03/pycudadecon"}, {"uid": "github/inonchiu/ComEst", "html_url": "https://rseng.github.io/software/repository/github/inonchiu/ComEst", "api_url": "https://rseng.github.io/software/api/repos/github/inonchiu/ComEst"}, {"uid": "github/Collab4exaNBody/exaDEM", "html_url": "https://rseng.github.io/software/repository/github/Collab4exaNBody/exaDEM", "api_url": "https://rseng.github.io/software/api/repos/github/Collab4exaNBody/exaDEM"}, {"uid": "github/cosmo-sims/DISCO-DJ", "html_url": "https://rseng.github.io/software/repository/github/cosmo-sims/DISCO-DJ", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-sims/DISCO-DJ"}, {"uid": "github/raufs/skDER", "html_url": "https://rseng.github.io/software/repository/github/raufs/skDER", "api_url": "https://rseng.github.io/software/api/repos/github/raufs/skDER"}, {"uid": "github/ArnaudCassan/microlensing", "html_url": "https://rseng.github.io/software/repository/github/ArnaudCassan/microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/ArnaudCassan/microlensing"}, {"uid": "github/shirtsgroup/physical_validation", "html_url": "https://rseng.github.io/software/repository/github/shirtsgroup/physical_validation", "api_url": "https://rseng.github.io/software/api/repos/github/shirtsgroup/physical_validation"}, {"uid": "github/yesint/EnCurv", "html_url": "https://rseng.github.io/software/repository/github/yesint/EnCurv", "api_url": "https://rseng.github.io/software/api/repos/github/yesint/EnCurv"}, {"uid": "github/inducer/modepy", "html_url": "https://rseng.github.io/software/repository/github/inducer/modepy", "api_url": "https://rseng.github.io/software/api/repos/github/inducer/modepy"}, {"uid": "github/genomehubs/goat-cli", "html_url": "https://rseng.github.io/software/repository/github/genomehubs/goat-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genomehubs/goat-cli"}, {"uid": "github/hajimes/mmh3", "html_url": "https://rseng.github.io/software/repository/github/hajimes/mmh3", "api_url": "https://rseng.github.io/software/api/repos/github/hajimes/mmh3"}, {"uid": "github/jumphone/inferloop", "html_url": "https://rseng.github.io/software/repository/github/jumphone/inferloop", "api_url": "https://rseng.github.io/software/api/repos/github/jumphone/inferloop"}, {"uid": "github/Heldenkombinat/Logodetect", "html_url": "https://rseng.github.io/software/repository/github/Heldenkombinat/Logodetect", "api_url": "https://rseng.github.io/software/api/repos/github/Heldenkombinat/Logodetect"}, {"uid": "github/tidymess-code/tidymess", "html_url": "https://rseng.github.io/software/repository/github/tidymess-code/tidymess", "api_url": "https://rseng.github.io/software/api/repos/github/tidymess-code/tidymess"}, {"uid": "github/fforster/delight", "html_url": "https://rseng.github.io/software/repository/github/fforster/delight", "api_url": "https://rseng.github.io/software/api/repos/github/fforster/delight"}, {"uid": "github/cython/cython", "html_url": "https://rseng.github.io/software/repository/github/cython/cython", "api_url": "https://rseng.github.io/software/api/repos/github/cython/cython"}, {"uid": "github/mongibellili/QuantizedSystemSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/mongibellili/QuantizedSystemSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mongibellili/QuantizedSystemSolver.jl"}, {"uid": "github/maximewack/viroCapt", "html_url": "https://rseng.github.io/software/repository/github/maximewack/viroCapt", "api_url": "https://rseng.github.io/software/api/repos/github/maximewack/viroCapt"}, {"uid": "github/pachterlab/kb_python", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kb_python", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kb_python"}, {"uid": "github/pachterlab/kallisto", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kallisto"}, {"uid": "github/bramvandijk88/cacatoo", "html_url": "https://rseng.github.io/software/repository/github/bramvandijk88/cacatoo", "api_url": "https://rseng.github.io/software/api/repos/github/bramvandijk88/cacatoo"}, {"uid": "github/UrbanRuralSystems/ur-scape", "html_url": "https://rseng.github.io/software/repository/github/UrbanRuralSystems/ur-scape", "api_url": "https://rseng.github.io/software/api/repos/github/UrbanRuralSystems/ur-scape"}, {"uid": "github/leesulab/arcMS", "html_url": "https://rseng.github.io/software/repository/github/leesulab/arcMS", "api_url": "https://rseng.github.io/software/api/repos/github/leesulab/arcMS"}, {"uid": "github/kjschmidlab/GGoutlieR", "html_url": "https://rseng.github.io/software/repository/github/kjschmidlab/GGoutlieR", "api_url": "https://rseng.github.io/software/api/repos/github/kjschmidlab/GGoutlieR"}, {"uid": "github/hotokezaka/HeatingRate", "html_url": "https://rseng.github.io/software/repository/github/hotokezaka/HeatingRate", "api_url": "https://rseng.github.io/software/api/repos/github/hotokezaka/HeatingRate"}, {"uid": "github/saezlab/PHONEMeS", "html_url": "https://rseng.github.io/software/repository/github/saezlab/PHONEMeS", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/PHONEMeS"}, {"uid": "github/saezlab/liana-py", "html_url": "https://rseng.github.io/software/repository/github/saezlab/liana-py", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/liana-py"}, {"uid": "github/mzkhalid039/DWBuilder", "html_url": "https://rseng.github.io/software/repository/github/mzkhalid039/DWBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/mzkhalid039/DWBuilder"}, {"uid": "github/MichaelSel/edoJS", "html_url": "https://rseng.github.io/software/repository/github/MichaelSel/edoJS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelSel/edoJS"}, {"uid": "github/CrowdTruth/CrowdTruth", "html_url": "https://rseng.github.io/software/repository/github/CrowdTruth/CrowdTruth", "api_url": "https://rseng.github.io/software/api/repos/github/CrowdTruth/CrowdTruth"}, {"uid": "github/muzafferarikan/gNOMO2", "html_url": "https://rseng.github.io/software/repository/github/muzafferarikan/gNOMO2", "api_url": "https://rseng.github.io/software/api/repos/github/muzafferarikan/gNOMO2"}, {"uid": "github/ecological-cities/home2park", "html_url": "https://rseng.github.io/software/repository/github/ecological-cities/home2park", "api_url": "https://rseng.github.io/software/api/repos/github/ecological-cities/home2park"}, {"uid": "github/EdgeVPNio/evio", "html_url": "https://rseng.github.io/software/repository/github/EdgeVPNio/evio", "api_url": "https://rseng.github.io/software/api/repos/github/EdgeVPNio/evio"}, {"uid": "github/rkkuang/triplelens", "html_url": "https://rseng.github.io/software/repository/github/rkkuang/triplelens", "api_url": "https://rseng.github.io/software/api/repos/github/rkkuang/triplelens"}, {"uid": "github/kblin/ncbi-acc-download", "html_url": "https://rseng.github.io/software/repository/github/kblin/ncbi-acc-download", "api_url": "https://rseng.github.io/software/api/repos/github/kblin/ncbi-acc-download"}, {"uid": "github/joshjchayes/TransitFit", "html_url": "https://rseng.github.io/software/repository/github/joshjchayes/TransitFit", "api_url": "https://rseng.github.io/software/api/repos/github/joshjchayes/TransitFit"}, {"uid": "github/JesusTorrado/extrapops", "html_url": "https://rseng.github.io/software/repository/github/JesusTorrado/extrapops", "api_url": "https://rseng.github.io/software/api/repos/github/JesusTorrado/extrapops"}, {"uid": "github/seshnadathur/Revolver", "html_url": "https://rseng.github.io/software/repository/github/seshnadathur/Revolver", "api_url": "https://rseng.github.io/software/api/repos/github/seshnadathur/Revolver"}, {"uid": "github/conchoecia/pauvre", "html_url": "https://rseng.github.io/software/repository/github/conchoecia/pauvre", "api_url": "https://rseng.github.io/software/api/repos/github/conchoecia/pauvre"}, {"uid": "github/MrMinimal64/multivar_horner", "html_url": "https://rseng.github.io/software/repository/github/MrMinimal64/multivar_horner", "api_url": "https://rseng.github.io/software/api/repos/github/MrMinimal64/multivar_horner"}, {"uid": "github/zhouzilu/DENDRO", "html_url": "https://rseng.github.io/software/repository/github/zhouzilu/DENDRO", "api_url": "https://rseng.github.io/software/api/repos/github/zhouzilu/DENDRO"}, {"uid": "github/QuantumPlasma/SFQEDtoolkit", "html_url": "https://rseng.github.io/software/repository/github/QuantumPlasma/SFQEDtoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/QuantumPlasma/SFQEDtoolkit"}, {"uid": "github/stemangiola/tidyHeatmap", "html_url": "https://rseng.github.io/software/repository/github/stemangiola/tidyHeatmap", "api_url": "https://rseng.github.io/software/api/repos/github/stemangiola/tidyHeatmap"}, {"uid": "github/chhylp123/hifiasm", "html_url": "https://rseng.github.io/software/repository/github/chhylp123/hifiasm", "api_url": "https://rseng.github.io/software/api/repos/github/chhylp123/hifiasm"}, {"uid": "github/SandoghdarLab/PiSCAT", "html_url": "https://rseng.github.io/software/repository/github/SandoghdarLab/PiSCAT", "api_url": "https://rseng.github.io/software/api/repos/github/SandoghdarLab/PiSCAT"}, {"uid": "github/mildpiggy/DEP2", "html_url": "https://rseng.github.io/software/repository/github/mildpiggy/DEP2", "api_url": "https://rseng.github.io/software/api/repos/github/mildpiggy/DEP2"}, {"uid": "github/domenico-simone/rmlst_api", "html_url": "https://rseng.github.io/software/repository/github/domenico-simone/rmlst_api", "api_url": "https://rseng.github.io/software/api/repos/github/domenico-simone/rmlst_api"}, {"uid": "github/DeepRegNet/DeepReg", "html_url": "https://rseng.github.io/software/repository/github/DeepRegNet/DeepReg", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRegNet/DeepReg"}, {"uid": "github/shenwei356/LexicMap", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/LexicMap", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/LexicMap"}, {"uid": "github/shenwei356/kmcp", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/kmcp", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/kmcp"}, {"uid": "github/shenwei356/seqkit", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/seqkit", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/seqkit"}, {"uid": "github/shenwei356/csvtk", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/csvtk", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/csvtk"}, {"uid": "github/shenwei356/unikmer", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/unikmer", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/unikmer"}, {"uid": "github/radio1988/OneStopRNAseq", "html_url": "https://rseng.github.io/software/repository/github/radio1988/OneStopRNAseq", "api_url": "https://rseng.github.io/software/api/repos/github/radio1988/OneStopRNAseq"}, {"uid": "github/davidpagnon/Sports2D", "html_url": "https://rseng.github.io/software/repository/github/davidpagnon/Sports2D", "api_url": "https://rseng.github.io/software/api/repos/github/davidpagnon/Sports2D"}, {"uid": "github/1054/Crab.Toolkit.michi2", "html_url": "https://rseng.github.io/software/repository/github/1054/Crab.Toolkit.michi2", "api_url": "https://rseng.github.io/software/api/repos/github/1054/Crab.Toolkit.michi2"}, {"uid": "github/MingBit/PySCNet", "html_url": "https://rseng.github.io/software/repository/github/MingBit/PySCNet", "api_url": "https://rseng.github.io/software/api/repos/github/MingBit/PySCNet"}, {"uid": "github/trchudley/pdemtools", "html_url": "https://rseng.github.io/software/repository/github/trchudley/pdemtools", "api_url": "https://rseng.github.io/software/api/repos/github/trchudley/pdemtools"}, {"uid": "github/nedRad88/SCALAR", "html_url": "https://rseng.github.io/software/repository/github/nedRad88/SCALAR", "api_url": "https://rseng.github.io/software/api/repos/github/nedRad88/SCALAR"}, {"uid": "github/hongli-ma/RNANetMotif", "html_url": "https://rseng.github.io/software/repository/github/hongli-ma/RNANetMotif", "api_url": "https://rseng.github.io/software/api/repos/github/hongli-ma/RNANetMotif"}, {"uid": "github/Jashcraf/katsu", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/katsu", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/katsu"}, {"uid": "github/Jashcraf/poke", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/poke", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/poke"}, {"uid": "github/aris-mav/NMRInversions.jl", "html_url": "https://rseng.github.io/software/repository/github/aris-mav/NMRInversions.jl", "api_url": "https://rseng.github.io/software/api/repos/github/aris-mav/NMRInversions.jl"}, {"uid": "github/xenon-middleware/xenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/xenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/xenon"}, {"uid": "github/xenon-middleware/pyxenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/pyxenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/pyxenon"}, {"uid": "github/cosmostat/nicaea", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/nicaea", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/nicaea"}, {"uid": "github/cosmostat/CosmoPMC", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/CosmoPMC", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/CosmoPMC"}, {"uid": "github/cosmostat/pmclib", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/pmclib", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/pmclib"}, {"uid": "github/arumugamlab/msamtools", "html_url": "https://rseng.github.io/software/repository/github/arumugamlab/msamtools", "api_url": "https://rseng.github.io/software/api/repos/github/arumugamlab/msamtools"}, {"uid": "github/cvs-health/langfair", "html_url": "https://rseng.github.io/software/repository/github/cvs-health/langfair", "api_url": "https://rseng.github.io/software/api/repos/github/cvs-health/langfair"}, {"uid": "github/EISy-as-Py/hardy", "html_url": "https://rseng.github.io/software/repository/github/EISy-as-Py/hardy", "api_url": "https://rseng.github.io/software/api/repos/github/EISy-as-Py/hardy"}, {"uid": "github/madysonb/EVA", "html_url": "https://rseng.github.io/software/repository/github/madysonb/EVA", "api_url": "https://rseng.github.io/software/api/repos/github/madysonb/EVA"}, {"uid": "github/tlverse/hal9001", "html_url": "https://rseng.github.io/software/repository/github/tlverse/hal9001", "api_url": "https://rseng.github.io/software/api/repos/github/tlverse/hal9001"}, {"uid": "github/yongsukyee/uncertain_blackholemass", "html_url": "https://rseng.github.io/software/repository/github/yongsukyee/uncertain_blackholemass", "api_url": "https://rseng.github.io/software/api/repos/github/yongsukyee/uncertain_blackholemass"}, {"uid": "github/pyplati/platipy", "html_url": "https://rseng.github.io/software/repository/github/pyplati/platipy", "api_url": "https://rseng.github.io/software/api/repos/github/pyplati/platipy"}, {"uid": "github/theLongLab/CATE", "html_url": "https://rseng.github.io/software/repository/github/theLongLab/CATE", "api_url": "https://rseng.github.io/software/api/repos/github/theLongLab/CATE"}, {"uid": "github/exoml/plan-net", "html_url": "https://rseng.github.io/software/repository/github/exoml/plan-net", "api_url": "https://rseng.github.io/software/api/repos/github/exoml/plan-net"}, {"uid": "github/xCDAT/xcdat", "html_url": "https://rseng.github.io/software/repository/github/xCDAT/xcdat", "api_url": "https://rseng.github.io/software/api/repos/github/xCDAT/xcdat"}, {"uid": "github/jkbonfield/io_lib", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/io_lib", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/io_lib"}, {"uid": "github/jkbonfield/crumble", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/crumble", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/crumble"}, {"uid": "github/jkbonfield/htscodecs", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/htscodecs", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/htscodecs"}, {"uid": "github/dsavransky/EXOSIMS", "html_url": "https://rseng.github.io/software/repository/github/dsavransky/EXOSIMS", "api_url": "https://rseng.github.io/software/api/repos/github/dsavransky/EXOSIMS"}, {"uid": "github/hydroframe/hf_hydrodata", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/hf_hydrodata", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/hf_hydrodata"}, {"uid": "github/hydroframe/subsettools", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/subsettools", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/subsettools"}, {"uid": "github/jorisparet/partycls", "html_url": "https://rseng.github.io/software/repository/github/jorisparet/partycls", "api_url": "https://rseng.github.io/software/api/repos/github/jorisparet/partycls"}, {"uid": "github/ajosephy/Clustering", "html_url": "https://rseng.github.io/software/repository/github/ajosephy/Clustering", "api_url": "https://rseng.github.io/software/api/repos/github/ajosephy/Clustering"}, {"uid": "github/dianna-ai/dianna", "html_url": "https://rseng.github.io/software/repository/github/dianna-ai/dianna", "api_url": "https://rseng.github.io/software/api/repos/github/dianna-ai/dianna"}, {"uid": "github/CoolWorlds/exoinformatics", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/exoinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/exoinformatics"}, {"uid": "github/CoolWorlds/ExoPriors", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/ExoPriors", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/ExoPriors"}, {"uid": "github/BirkhoffG/jax-relax", "html_url": "https://rseng.github.io/software/repository/github/BirkhoffG/jax-relax", "api_url": "https://rseng.github.io/software/api/repos/github/BirkhoffG/jax-relax"}, {"uid": "github/exoclam/gaspery", "html_url": "https://rseng.github.io/software/repository/github/exoclam/gaspery", "api_url": "https://rseng.github.io/software/api/repos/github/exoclam/gaspery"}, {"uid": "github/Mulan-94/smops", "html_url": "https://rseng.github.io/software/repository/github/Mulan-94/smops", "api_url": "https://rseng.github.io/software/api/repos/github/Mulan-94/smops"}, {"uid": "github/rgmyr/corebreakout", "html_url": "https://rseng.github.io/software/repository/github/rgmyr/corebreakout", "api_url": "https://rseng.github.io/software/api/repos/github/rgmyr/corebreakout"}, {"uid": "github/mikaelLEROY/AxionNS_RayTracing", "html_url": "https://rseng.github.io/software/repository/github/mikaelLEROY/AxionNS_RayTracing", "api_url": "https://rseng.github.io/software/api/repos/github/mikaelLEROY/AxionNS_RayTracing"}, {"uid": "github/desmid/mview", "html_url": "https://rseng.github.io/software/repository/github/desmid/mview", "api_url": "https://rseng.github.io/software/api/repos/github/desmid/mview"}, {"uid": "github/matchms/matchms", "html_url": "https://rseng.github.io/software/repository/github/matchms/matchms", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/matchms"}, {"uid": "github/matchms/ms2deepscore", "html_url": "https://rseng.github.io/software/repository/github/matchms/ms2deepscore", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/ms2deepscore"}, {"uid": "github/hasindu2008/slow5tools", "html_url": "https://rseng.github.io/software/repository/github/hasindu2008/slow5tools", "api_url": "https://rseng.github.io/software/api/repos/github/hasindu2008/slow5tools"}, {"uid": "github/ryanoelkers/DIA", "html_url": "https://rseng.github.io/software/repository/github/ryanoelkers/DIA", "api_url": "https://rseng.github.io/software/api/repos/github/ryanoelkers/DIA"}, {"uid": "github/chapmanb/bcbb", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbb", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbb"}, {"uid": "github/chapmanb/bcbio.variation", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.variation", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.variation"}, {"uid": "github/chapmanb/bcbio.prioritize", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.prioritize", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.prioritize"}, {"uid": "github/ORNL/tx2", "html_url": "https://rseng.github.io/software/repository/github/ORNL/tx2", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/tx2"}, {"uid": "github/ORNL/icat", "html_url": "https://rseng.github.io/software/repository/github/ORNL/icat", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/icat"}, {"uid": "github/ORNL/Equilipy", "html_url": "https://rseng.github.io/software/repository/github/ORNL/Equilipy", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/Equilipy"}, {"uid": "github/ORNL/curifactory", "html_url": "https://rseng.github.io/software/repository/github/ORNL/curifactory", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/curifactory"}, {"uid": "github/ORNL/AdditiveFOAM", "html_url": "https://rseng.github.io/software/repository/github/ORNL/AdditiveFOAM", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/AdditiveFOAM"}, {"uid": "github/xpsi-group/neost", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/neost", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/neost"}, {"uid": "github/xpsi-group/xpsi", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/xpsi", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/xpsi"}, {"uid": "github/aimalz/qp", "html_url": "https://rseng.github.io/software/repository/github/aimalz/qp", "api_url": "https://rseng.github.io/software/api/repos/github/aimalz/qp"}, {"uid": "github/meerklass/MeerFish", "html_url": "https://rseng.github.io/software/repository/github/meerklass/MeerFish", "api_url": "https://rseng.github.io/software/api/repos/github/meerklass/MeerFish"}, {"uid": "github/jmiramont/mcsm-benchs", "html_url": "https://rseng.github.io/software/repository/github/jmiramont/mcsm-benchs", "api_url": "https://rseng.github.io/software/api/repos/github/jmiramont/mcsm-benchs"}, {"uid": "github/dwkim78/upsilon", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/upsilon", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/upsilon"}, {"uid": "github/dwkim78/ASTRiDE", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/ASTRiDE", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/ASTRiDE"}, {"uid": "github/dwkim78/pdtrend", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/pdtrend", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/pdtrend"}, {"uid": "github/Joost987/MONDPMesh", "html_url": "https://rseng.github.io/software/repository/github/Joost987/MONDPMesh", "api_url": "https://rseng.github.io/software/api/repos/github/Joost987/MONDPMesh"}, {"uid": "github/SpaceOdyssey/Blobby3D", "html_url": "https://rseng.github.io/software/repository/github/SpaceOdyssey/Blobby3D", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceOdyssey/Blobby3D"}, {"uid": "github/Pranab-JD/LeXInt", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/LeXInt", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/LeXInt"}, {"uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE"}, {"uid": "github/Circuitscape/Omniscape.jl", "html_url": "https://rseng.github.io/software/repository/github/Circuitscape/Omniscape.jl", "api_url": "https://rseng.github.io/software/api/repos/github/Circuitscape/Omniscape.jl"}, {"uid": "github/JoeMcEwen/FAST-PT", "html_url": "https://rseng.github.io/software/repository/github/JoeMcEwen/FAST-PT", "api_url": "https://rseng.github.io/software/api/repos/github/JoeMcEwen/FAST-PT"}, {"uid": "github/davek44/Glimmer-MG", "html_url": "https://rseng.github.io/software/repository/github/davek44/Glimmer-MG", "api_url": "https://rseng.github.io/software/api/repos/github/davek44/Glimmer-MG"}, {"uid": "github/angelmons/landlab", "html_url": "https://rseng.github.io/software/repository/github/angelmons/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/angelmons/landlab"}, {"uid": "github/mariogrs/Simfast21", "html_url": "https://rseng.github.io/software/repository/github/mariogrs/Simfast21", "api_url": "https://rseng.github.io/software/api/repos/github/mariogrs/Simfast21"}, {"uid": "github/QCUncertainty/sigma", "html_url": "https://rseng.github.io/software/repository/github/QCUncertainty/sigma", "api_url": "https://rseng.github.io/software/api/repos/github/QCUncertainty/sigma"}, {"uid": "github/kmkuesters/pooledpeaks", "html_url": "https://rseng.github.io/software/repository/github/kmkuesters/pooledpeaks", "api_url": "https://rseng.github.io/software/api/repos/github/kmkuesters/pooledpeaks"}, {"uid": "github/jmcbroome/BTE", "html_url": "https://rseng.github.io/software/repository/github/jmcbroome/BTE", "api_url": "https://rseng.github.io/software/api/repos/github/jmcbroome/BTE"}, {"uid": "github/FitSNAP/FitSNAP", "html_url": "https://rseng.github.io/software/repository/github/FitSNAP/FitSNAP", "api_url": "https://rseng.github.io/software/api/repos/github/FitSNAP/FitSNAP"}, {"uid": "github/aconley/mbb_emcee", "html_url": "https://rseng.github.io/software/repository/github/aconley/mbb_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/mbb_emcee"}, {"uid": "github/aconley/simple_cosfitter", "html_url": "https://rseng.github.io/software/repository/github/aconley/simple_cosfitter", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/simple_cosfitter"}, {"uid": "github/eelregit/pmwd", "html_url": "https://rseng.github.io/software/repository/github/eelregit/pmwd", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/pmwd"}, {"uid": "github/eelregit/mcfit", "html_url": "https://rseng.github.io/software/repository/github/eelregit/mcfit", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/mcfit"}, {"uid": "github/eelregit/covdisc", "html_url": "https://rseng.github.io/software/repository/github/eelregit/covdisc", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/covdisc"}, {"uid": "github/vdhooftcompmet/MS2LDA", "html_url": "https://rseng.github.io/software/repository/github/vdhooftcompmet/MS2LDA", "api_url": "https://rseng.github.io/software/api/repos/github/vdhooftcompmet/MS2LDA"}, {"uid": "github/musoke/ultradark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/ultradark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/ultradark.jl"}, {"uid": "github/musoke/UltraDark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/UltraDark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/UltraDark.jl"}, {"uid": "github/LMJL-Alea/ktest", "html_url": "https://rseng.github.io/software/repository/github/LMJL-Alea/ktest", "api_url": "https://rseng.github.io/software/api/repos/github/LMJL-Alea/ktest"}, {"uid": "github/twesterhout/lattice-symmetries", "html_url": "https://rseng.github.io/software/repository/github/twesterhout/lattice-symmetries", "api_url": "https://rseng.github.io/software/api/repos/github/twesterhout/lattice-symmetries"}, {"uid": "github/ydLiu-HIT/deSALT", "html_url": "https://rseng.github.io/software/repository/github/ydLiu-HIT/deSALT", "api_url": "https://rseng.github.io/software/api/repos/github/ydLiu-HIT/deSALT"}, {"uid": "github/Sydney-Informatics-Hub/OmixLitMiner", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/OmixLitMiner"}, {"uid": "github/Sydney-Informatics-Hub/geodata-harvester", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/geodata-harvester"}, {"uid": "github/RavenGan/GR2D2", "html_url": "https://rseng.github.io/software/repository/github/RavenGan/GR2D2", "api_url": "https://rseng.github.io/software/api/repos/github/RavenGan/GR2D2"}, {"uid": "github/davidogara/hetGPy", "html_url": "https://rseng.github.io/software/repository/github/davidogara/hetGPy", "api_url": "https://rseng.github.io/software/api/repos/github/davidogara/hetGPy"}, {"uid": "github/hz1010/FIPRESCI_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/hz1010/FIPRESCI_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/hz1010/FIPRESCI_data_analysis"}, {"uid": "github/LeoEgidi/pivmet", "html_url": "https://rseng.github.io/software/repository/github/LeoEgidi/pivmet", "api_url": "https://rseng.github.io/software/api/repos/github/LeoEgidi/pivmet"}, {"uid": "github/longfei8533/SDC", "html_url": "https://rseng.github.io/software/repository/github/longfei8533/SDC", "api_url": "https://rseng.github.io/software/api/repos/github/longfei8533/SDC"}, {"uid": "github/bids-standard/bids-validator", "html_url": "https://rseng.github.io/software/repository/github/bids-standard/bids-validator", "api_url": "https://rseng.github.io/software/api/repos/github/bids-standard/bids-validator"}, {"uid": "github/miche-levi/pncbc-eftofpng", "html_url": "https://rseng.github.io/software/repository/github/miche-levi/pncbc-eftofpng", "api_url": "https://rseng.github.io/software/api/repos/github/miche-levi/pncbc-eftofpng"}, {"uid": "github/sbi-dev/sbi", "html_url": "https://rseng.github.io/software/repository/github/sbi-dev/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/sbi-dev/sbi"}, {"uid": "github/pydata/xarray", "html_url": "https://rseng.github.io/software/repository/github/pydata/xarray", "api_url": "https://rseng.github.io/software/api/repos/github/pydata/xarray"}, {"uid": "github/jesford/cluster-lensing", "html_url": "https://rseng.github.io/software/repository/github/jesford/cluster-lensing", "api_url": "https://rseng.github.io/software/api/repos/github/jesford/cluster-lensing"}, {"uid": "github/calboo/Potential_Field_Calculator", "html_url": "https://rseng.github.io/software/repository/github/calboo/Potential_Field_Calculator", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/Potential_Field_Calculator"}, {"uid": "github/calboo/wigglewave", "html_url": "https://rseng.github.io/software/repository/github/calboo/wigglewave", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/wigglewave"}, {"uid": "github/calboo/TAWAS", "html_url": "https://rseng.github.io/software/repository/github/calboo/TAWAS", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/TAWAS"}, {"uid": "github/yqiuu/starduster", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/starduster", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/starduster"}, {"uid": "github/yqiuu/spectuner", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/spectuner", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/spectuner"}, {"uid": "github/ABSESpy/ABSESpy", "html_url": "https://rseng.github.io/software/repository/github/ABSESpy/ABSESpy", "api_url": "https://rseng.github.io/software/api/repos/github/ABSESpy/ABSESpy"}, {"uid": "github/athulpg007/AMAT", "html_url": "https://rseng.github.io/software/repository/github/athulpg007/AMAT", "api_url": "https://rseng.github.io/software/api/repos/github/athulpg007/AMAT"}, {"uid": "github/kutaslab/fitgrid", "html_url": "https://rseng.github.io/software/repository/github/kutaslab/fitgrid", "api_url": "https://rseng.github.io/software/api/repos/github/kutaslab/fitgrid"}, {"uid": "github/laristra/flecsph", "html_url": "https://rseng.github.io/software/repository/github/laristra/flecsph", "api_url": "https://rseng.github.io/software/api/repos/github/laristra/flecsph"}, {"uid": "github/bodulic/CATS-rb", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rb", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rb"}, {"uid": "github/bodulic/CATS-rf", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rf", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rf"}, {"uid": "github/a-griffiths/AutoSpec", "html_url": "https://rseng.github.io/software/repository/github/a-griffiths/AutoSpec", "api_url": "https://rseng.github.io/software/api/repos/github/a-griffiths/AutoSpec"}, {"uid": "github/CompNet/Renard", "html_url": "https://rseng.github.io/software/repository/github/CompNet/Renard", "api_url": "https://rseng.github.io/software/api/repos/github/CompNet/Renard"}, {"uid": "github/lbcb-sci/raven", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/raven", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/raven"}, {"uid": "github/lbcb-sci/racon", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/racon", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/racon"}, {"uid": "github/lbcb-sci/graphmap2", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/graphmap2", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/graphmap2"}, {"uid": "github/Balaje/iceFem", "html_url": "https://rseng.github.io/software/repository/github/Balaje/iceFem", "api_url": "https://rseng.github.io/software/api/repos/github/Balaje/iceFem"}, {"uid": "github/lucian-ilie/DELPHI", "html_url": "https://rseng.github.io/software/repository/github/lucian-ilie/DELPHI", "api_url": "https://rseng.github.io/software/api/repos/github/lucian-ilie/DELPHI"}, {"uid": "github/altjerue/paramo", "html_url": "https://rseng.github.io/software/repository/github/altjerue/paramo", "api_url": "https://rseng.github.io/software/api/repos/github/altjerue/paramo"}, {"uid": "github/RudolfCardinal/camcops", "html_url": "https://rseng.github.io/software/repository/github/RudolfCardinal/camcops", "api_url": "https://rseng.github.io/software/api/repos/github/RudolfCardinal/camcops"}, {"uid": "github/CLIMADA-project/climada_python", "html_url": "https://rseng.github.io/software/repository/github/CLIMADA-project/climada_python", "api_url": "https://rseng.github.io/software/api/repos/github/CLIMADA-project/climada_python"}, {"uid": "github/toruseo/UXsim", "html_url": "https://rseng.github.io/software/repository/github/toruseo/UXsim", "api_url": "https://rseng.github.io/software/api/repos/github/toruseo/UXsim"}, {"uid": "github/martinvonk/SPEI", "html_url": "https://rseng.github.io/software/repository/github/martinvonk/SPEI", "api_url": "https://rseng.github.io/software/api/repos/github/martinvonk/SPEI"}, {"uid": "github/ColemanRHarris/mxnorm", "html_url": "https://rseng.github.io/software/repository/github/ColemanRHarris/mxnorm", "api_url": "https://rseng.github.io/software/api/repos/github/ColemanRHarris/mxnorm"}, {"uid": "github/riatelab/osrm", "html_url": "https://rseng.github.io/software/repository/github/riatelab/osrm", "api_url": "https://rseng.github.io/software/api/repos/github/riatelab/osrm"}, {"uid": "github/vhaasteren/piccard", "html_url": "https://rseng.github.io/software/repository/github/vhaasteren/piccard", "api_url": "https://rseng.github.io/software/api/repos/github/vhaasteren/piccard"}, {"uid": "github/ExaScience/elprep", "html_url": "https://rseng.github.io/software/repository/github/ExaScience/elprep", "api_url": "https://rseng.github.io/software/api/repos/github/ExaScience/elprep"}, {"uid": "github/JoWestermann/smolyax", "html_url": "https://rseng.github.io/software/repository/github/JoWestermann/smolyax", "api_url": "https://rseng.github.io/software/api/repos/github/JoWestermann/smolyax"}, {"uid": "github/carlosborca/CrystaLattE", "html_url": "https://rseng.github.io/software/repository/github/carlosborca/CrystaLattE", "api_url": "https://rseng.github.io/software/api/repos/github/carlosborca/CrystaLattE"}, {"uid": "github/epi2me-labs/mapula", "html_url": "https://rseng.github.io/software/repository/github/epi2me-labs/mapula", "api_url": "https://rseng.github.io/software/api/repos/github/epi2me-labs/mapula"}, {"uid": "github/eggplantbren/Exoplanet", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/Exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/Exoplanet"}, {"uid": "github/eggplantbren/DNest4", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest4", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest4"}, {"uid": "github/eggplantbren/RJObject", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RJObject", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RJObject"}, {"uid": "github/eggplantbren/DNest3", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest3", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest3"}, {"uid": "github/eggplantbren/RMHB", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RMHB", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RMHB"}, {"uid": "github/EnsembleGovServices/kamodo-core", "html_url": "https://rseng.github.io/software/repository/github/EnsembleGovServices/kamodo-core", "api_url": "https://rseng.github.io/software/api/repos/github/EnsembleGovServices/kamodo-core"}, {"uid": "github/Ecos-platform/ecos", "html_url": "https://rseng.github.io/software/repository/github/Ecos-platform/ecos", "api_url": "https://rseng.github.io/software/api/repos/github/Ecos-platform/ecos"}, {"uid": "github/asalda/FiCUS", "html_url": "https://rseng.github.io/software/repository/github/asalda/FiCUS", "api_url": "https://rseng.github.io/software/api/repos/github/asalda/FiCUS"}, {"uid": "github/Battery-Intelligence-Lab/dtw-cpp", "html_url": "https://rseng.github.io/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", "api_url": "https://rseng.github.io/software/api/repos/github/Battery-Intelligence-Lab/dtw-cpp"}, {"uid": "github/paumard/cubefit", "html_url": "https://rseng.github.io/software/repository/github/paumard/cubefit", "api_url": "https://rseng.github.io/software/api/repos/github/paumard/cubefit"}, {"uid": "github/mehdirezaie/SYSNet", "html_url": "https://rseng.github.io/software/repository/github/mehdirezaie/SYSNet", "api_url": "https://rseng.github.io/software/api/repos/github/mehdirezaie/SYSNet"}, {"uid": "github/BMILAB/scLINE", "html_url": "https://rseng.github.io/software/repository/github/BMILAB/scLINE", "api_url": "https://rseng.github.io/software/api/repos/github/BMILAB/scLINE"}, {"uid": "github/JorenSix/Olaf", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Olaf", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Olaf"}, {"uid": "github/JorenSix/Panako", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Panako", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Panako"}, {"uid": "github/wwood/kingfisher-download", "html_url": "https://rseng.github.io/software/repository/github/wwood/kingfisher-download", "api_url": "https://rseng.github.io/software/api/repos/github/wwood/kingfisher-download"}, {"uid": "github/NuGrid/NuPyCEE", "html_url": "https://rseng.github.io/software/repository/github/NuGrid/NuPyCEE", "api_url": "https://rseng.github.io/software/api/repos/github/NuGrid/NuPyCEE"}, {"uid": "github/SandyYuan/GRAND-HOD", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/GRAND-HOD", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/GRAND-HOD"}, {"uid": "github/SandyYuan/s3PCF", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/s3PCF", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/s3PCF"}, {"uid": "github/shaniAmare/long_read_tools", "html_url": "https://rseng.github.io/software/repository/github/shaniAmare/long_read_tools", "api_url": "https://rseng.github.io/software/api/repos/github/shaniAmare/long_read_tools"}, {"uid": "github/jakeret/tf_unet", "html_url": "https://rseng.github.io/software/repository/github/jakeret/tf_unet", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/tf_unet"}, {"uid": "github/jakeret/abcpmc", "html_url": "https://rseng.github.io/software/repository/github/jakeret/abcpmc", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/abcpmc"}, {"uid": "github/samuelyeewl/specmatch-emp", "html_url": "https://rseng.github.io/software/repository/github/samuelyeewl/specmatch-emp", "api_url": "https://rseng.github.io/software/api/repos/github/samuelyeewl/specmatch-emp"}, {"uid": "github/ml-evs/matador", "html_url": "https://rseng.github.io/software/repository/github/ml-evs/matador", "api_url": "https://rseng.github.io/software/api/repos/github/ml-evs/matador"}, {"uid": "github/lomereiter/sambamba", "html_url": "https://rseng.github.io/software/repository/github/lomereiter/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/lomereiter/sambamba"}, {"uid": "github/imcgreer/simqso", "html_url": "https://rseng.github.io/software/repository/github/imcgreer/simqso", "api_url": "https://rseng.github.io/software/api/repos/github/imcgreer/simqso"}, {"uid": "github/PBjam-projects/PBjam", "html_url": "https://rseng.github.io/software/repository/github/PBjam-projects/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/PBjam-projects/PBjam"}, {"uid": "github/wiki/Install-macs2", "html_url": "https://rseng.github.io/software/repository/github/wiki/Install-macs2", "api_url": "https://rseng.github.io/software/api/repos/github/wiki/Install-macs2"}, {"uid": "github/rnajena/sugar", "html_url": "https://rseng.github.io/software/repository/github/rnajena/sugar", "api_url": "https://rseng.github.io/software/api/repos/github/rnajena/sugar"}, {"uid": "github/Huang-lab/BEACON", "html_url": "https://rseng.github.io/software/repository/github/Huang-lab/BEACON", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-lab/BEACON"}, {"uid": "github/DeltaRCM/pyDeltaRCM", "html_url": "https://rseng.github.io/software/repository/github/DeltaRCM/pyDeltaRCM", "api_url": "https://rseng.github.io/software/api/repos/github/DeltaRCM/pyDeltaRCM"}, {"uid": "github/secastel/phaser", "html_url": "https://rseng.github.io/software/repository/github/secastel/phaser", "api_url": "https://rseng.github.io/software/api/repos/github/secastel/phaser"}, {"uid": "github/ridgelab/ExtRampOnline", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/ExtRampOnline", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/ExtRampOnline"}, {"uid": "github/ridgelab/rampAtlas", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/rampAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/rampAtlas"}, {"uid": "github/jczarnowski/DeepFactors", "html_url": "https://rseng.github.io/software/repository/github/jczarnowski/DeepFactors", "api_url": "https://rseng.github.io/software/api/repos/github/jczarnowski/DeepFactors"}, {"uid": "github/hopr-framework/PyHOPE", "html_url": "https://rseng.github.io/software/repository/github/hopr-framework/PyHOPE", "api_url": "https://rseng.github.io/software/api/repos/github/hopr-framework/PyHOPE"}, {"uid": "github/scrook/neuroml-db", "html_url": "https://rseng.github.io/software/repository/github/scrook/neuroml-db", "api_url": "https://rseng.github.io/software/api/repos/github/scrook/neuroml-db"}, {"uid": "github/rqtl/qtl2", "html_url": "https://rseng.github.io/software/repository/github/rqtl/qtl2", "api_url": "https://rseng.github.io/software/api/repos/github/rqtl/qtl2"}, {"uid": "github/kambrian/SubGen", "html_url": "https://rseng.github.io/software/repository/github/kambrian/SubGen", "api_url": "https://rseng.github.io/software/api/repos/github/kambrian/SubGen"}, {"uid": "github/LucindaLilley/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/LucindaLilley/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/LucindaLilley/PIRATES"}, {"uid": "github/ITA-Solar/rh", "html_url": "https://rseng.github.io/software/repository/github/ITA-Solar/rh", "api_url": "https://rseng.github.io/software/api/repos/github/ITA-Solar/rh"}, {"uid": "github/astrom-tom/dfitspy", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/dfitspy", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/dfitspy"}, {"uid": "github/astrom-tom/specstack", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/specstack", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/specstack"}, {"uid": "github/Stat-Cook/deident", "html_url": "https://rseng.github.io/software/repository/github/Stat-Cook/deident", "api_url": "https://rseng.github.io/software/api/repos/github/Stat-Cook/deident"}, {"uid": "github/bio2byte/constava", "html_url": "https://rseng.github.io/software/repository/github/bio2byte/constava", "api_url": "https://rseng.github.io/software/api/repos/github/bio2byte/constava"}, {"uid": "github/fannyhb/fargene", "html_url": "https://rseng.github.io/software/repository/github/fannyhb/fargene", "api_url": "https://rseng.github.io/software/api/repos/github/fannyhb/fargene"}, {"uid": "github/CM2S/piglot", "html_url": "https://rseng.github.io/software/repository/github/CM2S/piglot", "api_url": "https://rseng.github.io/software/api/repos/github/CM2S/piglot"}, {"uid": "github/vsbuffalo/scythe", "html_url": "https://rseng.github.io/software/repository/github/vsbuffalo/scythe", "api_url": "https://rseng.github.io/software/api/repos/github/vsbuffalo/scythe"}, {"uid": "github/aztekas-code/aztekas-main", "html_url": "https://rseng.github.io/software/repository/github/aztekas-code/aztekas-main", "api_url": "https://rseng.github.io/software/api/repos/github/aztekas-code/aztekas-main"}, {"uid": "github/VegeWaterDynamics/motrainer", "html_url": "https://rseng.github.io/software/repository/github/VegeWaterDynamics/motrainer", "api_url": "https://rseng.github.io/software/api/repos/github/VegeWaterDynamics/motrainer"}, {"uid": "github/Mec-iS/arrowspace-rs", "html_url": "https://rseng.github.io/software/repository/github/Mec-iS/arrowspace-rs", "api_url": "https://rseng.github.io/software/api/repos/github/Mec-iS/arrowspace-rs"}, {"uid": "github/shadden/celmech", "html_url": "https://rseng.github.io/software/repository/github/shadden/celmech", "api_url": "https://rseng.github.io/software/api/repos/github/shadden/celmech"}, {"uid": "github/jiahecui/SenAOReFoc", "html_url": "https://rseng.github.io/software/repository/github/jiahecui/SenAOReFoc", "api_url": "https://rseng.github.io/software/api/repos/github/jiahecui/SenAOReFoc"}, {"uid": "github/trixi-framework/HOHQMesh", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/HOHQMesh", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/HOHQMesh"}, {"uid": "github/trixi-framework/TrixiParticles.jl", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/TrixiParticles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/TrixiParticles.jl"}, {"uid": "github/YuSugihara/MutMap", "html_url": "https://rseng.github.io/software/repository/github/YuSugihara/MutMap", "api_url": "https://rseng.github.io/software/api/repos/github/YuSugihara/MutMap"}, {"uid": "github/anchal-009/SAVED21cm", "html_url": "https://rseng.github.io/software/repository/github/anchal-009/SAVED21cm", "api_url": "https://rseng.github.io/software/api/repos/github/anchal-009/SAVED21cm"}, {"uid": "github/AmruteLab/PyChelator", "html_url": "https://rseng.github.io/software/repository/github/AmruteLab/PyChelator", "api_url": "https://rseng.github.io/software/api/repos/github/AmruteLab/PyChelator"}, {"uid": "github/JLBLine/PUMA", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/PUMA", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/PUMA"}, {"uid": "github/JLBLine/WODEN", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/WODEN", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/WODEN"}, {"uid": "github/ExoCTK/exoctk", "html_url": "https://rseng.github.io/software/repository/github/ExoCTK/exoctk", "api_url": "https://rseng.github.io/software/api/repos/github/ExoCTK/exoctk"}, {"uid": "github/CEED/libCEED", "html_url": "https://rseng.github.io/software/repository/github/CEED/libCEED", "api_url": "https://rseng.github.io/software/api/repos/github/CEED/libCEED"}, {"uid": "github/pynbody/tangos", "html_url": "https://rseng.github.io/software/repository/github/pynbody/tangos", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/tangos"}, {"uid": "github/pynbody/pynbody", "html_url": "https://rseng.github.io/software/repository/github/pynbody/pynbody", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/pynbody"}, {"uid": "github/pynbody/genetIC", "html_url": "https://rseng.github.io/software/repository/github/pynbody/genetIC", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/genetIC"}, {"uid": "github/NctuICLab/PredCRP", "html_url": "https://rseng.github.io/software/repository/github/NctuICLab/PredCRP", "api_url": "https://rseng.github.io/software/api/repos/github/NctuICLab/PredCRP"}, {"uid": "github/nemesiscode/radtrancode", "html_url": "https://rseng.github.io/software/repository/github/nemesiscode/radtrancode", "api_url": "https://rseng.github.io/software/api/repos/github/nemesiscode/radtrancode"}, {"uid": "github/CmPA/iPic3D", "html_url": "https://rseng.github.io/software/repository/github/CmPA/iPic3D", "api_url": "https://rseng.github.io/software/api/repos/github/CmPA/iPic3D"}, {"uid": "github/jlenain/flaapluc", "html_url": "https://rseng.github.io/software/repository/github/jlenain/flaapluc", "api_url": "https://rseng.github.io/software/api/repos/github/jlenain/flaapluc"}, {"uid": "github/rbturnbull/ausdex", "html_url": "https://rseng.github.io/software/repository/github/rbturnbull/ausdex", "api_url": "https://rseng.github.io/software/api/repos/github/rbturnbull/ausdex"}, {"uid": "github/orcasgit/python-fitbit", "html_url": "https://rseng.github.io/software/repository/github/orcasgit/python-fitbit", "api_url": "https://rseng.github.io/software/api/repos/github/orcasgit/python-fitbit"}, {"uid": "github/tgrimes/SeqNet", "html_url": "https://rseng.github.io/software/repository/github/tgrimes/SeqNet", "api_url": "https://rseng.github.io/software/api/repos/github/tgrimes/SeqNet"}, {"uid": "github/jessecambon/tidygeocoder", "html_url": "https://rseng.github.io/software/repository/github/jessecambon/tidygeocoder", "api_url": "https://rseng.github.io/software/api/repos/github/jessecambon/tidygeocoder"}, {"uid": "github/pokynmr/ipick", "html_url": "https://rseng.github.io/software/repository/github/pokynmr/ipick", "api_url": "https://rseng.github.io/software/api/repos/github/pokynmr/ipick"}, {"uid": "github/scikit-learn-contrib/hdbscan", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn-contrib/hdbscan", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn-contrib/hdbscan"}, {"uid": "github/marieBvr/virAnnot", "html_url": "https://rseng.github.io/software/repository/github/marieBvr/virAnnot", "api_url": "https://rseng.github.io/software/api/repos/github/marieBvr/virAnnot"}, {"uid": "github/liulei/volks2", "html_url": "https://rseng.github.io/software/repository/github/liulei/volks2", "api_url": "https://rseng.github.io/software/api/repos/github/liulei/volks2"}, {"uid": "github/konradhoeffner/hdt", "html_url": "https://rseng.github.io/software/repository/github/konradhoeffner/hdt", "api_url": "https://rseng.github.io/software/api/repos/github/konradhoeffner/hdt"}, {"uid": "github/jhkorhonen/MOODS", "html_url": "https://rseng.github.io/software/repository/github/jhkorhonen/MOODS", "api_url": "https://rseng.github.io/software/api/repos/github/jhkorhonen/MOODS"}, {"uid": "github/Muszeb/ENQUIRE", "html_url": "https://rseng.github.io/software/repository/github/Muszeb/ENQUIRE", "api_url": "https://rseng.github.io/software/api/repos/github/Muszeb/ENQUIRE"}, {"uid": "github/hetalang/heta-compiler", "html_url": "https://rseng.github.io/software/repository/github/hetalang/heta-compiler", "api_url": "https://rseng.github.io/software/api/repos/github/hetalang/heta-compiler"}, {"uid": "github/jfowkes/pycutest", "html_url": "https://rseng.github.io/software/repository/github/jfowkes/pycutest", "api_url": "https://rseng.github.io/software/api/repos/github/jfowkes/pycutest"}, {"uid": "github/JeffLuo9/Hep_Ploidy_protocol", "html_url": "https://rseng.github.io/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLuo9/Hep_Ploidy_protocol"}, {"uid": "github/emrecdem/emo-spectre", "html_url": "https://rseng.github.io/software/repository/github/emrecdem/emo-spectre", "api_url": "https://rseng.github.io/software/api/repos/github/emrecdem/emo-spectre"}, {"uid": "github/loosolab/TOBIAS", "html_url": "https://rseng.github.io/software/repository/github/loosolab/TOBIAS", "api_url": "https://rseng.github.io/software/api/repos/github/loosolab/TOBIAS"}, {"uid": "github/cpinte/mcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/mcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/mcfost"}, {"uid": "github/cpinte/pymcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/pymcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/pymcfost"}, {"uid": "github/cpinte/casa_cube", "html_url": "https://rseng.github.io/software/repository/github/cpinte/casa_cube", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/casa_cube"}, {"uid": "github/trivnguyen/florah", "html_url": "https://rseng.github.io/software/repository/github/trivnguyen/florah", "api_url": "https://rseng.github.io/software/api/repos/github/trivnguyen/florah"}, {"uid": "github/logan-pearce/lofti_gaia", "html_url": "https://rseng.github.io/software/repository/github/logan-pearce/lofti_gaia", "api_url": "https://rseng.github.io/software/api/repos/github/logan-pearce/lofti_gaia"}, {"uid": "github/mazzalab/pyntacle", "html_url": "https://rseng.github.io/software/repository/github/mazzalab/pyntacle", "api_url": "https://rseng.github.io/software/api/repos/github/mazzalab/pyntacle"}, {"uid": "github/ltlancas/walter", "html_url": "https://rseng.github.io/software/repository/github/ltlancas/walter", "api_url": "https://rseng.github.io/software/api/repos/github/ltlancas/walter"}, {"uid": "github/obreschkow/dftools", "html_url": "https://rseng.github.io/software/repository/github/obreschkow/dftools", "api_url": "https://rseng.github.io/software/api/repos/github/obreschkow/dftools"}, {"uid": "github/manulera/OpenCloning_frontend", "html_url": "https://rseng.github.io/software/repository/github/manulera/OpenCloning_frontend", "api_url": "https://rseng.github.io/software/api/repos/github/manulera/OpenCloning_frontend"}, {"uid": "github/LindaNab/mecor", "html_url": "https://rseng.github.io/software/repository/github/LindaNab/mecor", "api_url": "https://rseng.github.io/software/api/repos/github/LindaNab/mecor"}, {"uid": "github/tupui/scipy", "html_url": "https://rseng.github.io/software/repository/github/tupui/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/tupui/scipy"}, {"uid": "github/JuliaOpt/JuMP.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOpt/JuMP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOpt/JuMP.jl"}, {"uid": "github/haiyang1986/TVAR", "html_url": "https://rseng.github.io/software/repository/github/haiyang1986/TVAR", "api_url": "https://rseng.github.io/software/api/repos/github/haiyang1986/TVAR"}, {"uid": "github/kd0kfo/cosmology", "html_url": "https://rseng.github.io/software/repository/github/kd0kfo/cosmology", "api_url": "https://rseng.github.io/software/api/repos/github/kd0kfo/cosmology"}, {"uid": "github/teoxxx/nemiss_pbl", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_pbl", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_pbl"}, {"uid": "github/teoxxx/nemiss_proper", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_proper", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_proper"}, {"uid": "github/teoxxx/rlos", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/rlos", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/rlos"}, {"uid": "github/YongyiLuo98/BVSim", "html_url": "https://rseng.github.io/software/repository/github/YongyiLuo98/BVSim", "api_url": "https://rseng.github.io/software/api/repos/github/YongyiLuo98/BVSim"}, {"uid": "github/Multiversario/satcand", "html_url": "https://rseng.github.io/software/repository/github/Multiversario/satcand", "api_url": "https://rseng.github.io/software/api/repos/github/Multiversario/satcand"}, {"uid": "github/humanfactors/FIPS", "html_url": "https://rseng.github.io/software/repository/github/humanfactors/FIPS", "api_url": "https://rseng.github.io/software/api/repos/github/humanfactors/FIPS"}, {"uid": "github/phitterio/phitter-kernel", "html_url": "https://rseng.github.io/software/repository/github/phitterio/phitter-kernel", "api_url": "https://rseng.github.io/software/api/repos/github/phitterio/phitter-kernel"}, {"uid": "github/sebhaan/geobo", "html_url": "https://rseng.github.io/software/repository/github/sebhaan/geobo", "api_url": "https://rseng.github.io/software/api/repos/github/sebhaan/geobo"}, {"uid": "github/widdowquinn/pyani", "html_url": "https://rseng.github.io/software/repository/github/widdowquinn/pyani", "api_url": "https://rseng.github.io/software/api/repos/github/widdowquinn/pyani"}, {"uid": "github/facebookresearch/segment-anything", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/segment-anything", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/segment-anything"}, {"uid": "github/facebookresearch/faiss", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/faiss", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/faiss"}, {"uid": "github/alessiospuriomancini/cosmopower", "html_url": "https://rseng.github.io/software/repository/github/alessiospuriomancini/cosmopower", "api_url": "https://rseng.github.io/software/api/repos/github/alessiospuriomancini/cosmopower"}, {"uid": "github/lucabaldini/ixpeobssim", "html_url": "https://rseng.github.io/software/repository/github/lucabaldini/ixpeobssim", "api_url": "https://rseng.github.io/software/api/repos/github/lucabaldini/ixpeobssim"}, {"uid": "github/pierrexyz/cbird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/cbird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/cbird"}, {"uid": "github/pierrexyz/pybird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/pybird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/pybird"}, {"uid": "github/fitbenchmarking/fitbenchmarking", "html_url": "https://rseng.github.io/software/repository/github/fitbenchmarking/fitbenchmarking", "api_url": "https://rseng.github.io/software/api/repos/github/fitbenchmarking/fitbenchmarking"}, {"uid": "github/fabian-sp/GGLasso", "html_url": "https://rseng.github.io/software/repository/github/fabian-sp/GGLasso", "api_url": "https://rseng.github.io/software/api/repos/github/fabian-sp/GGLasso"}, {"uid": "github/jmhuie/Slicer-SegmentGeometry", "html_url": "https://rseng.github.io/software/repository/github/jmhuie/Slicer-SegmentGeometry", "api_url": "https://rseng.github.io/software/api/repos/github/jmhuie/Slicer-SegmentGeometry"}, {"uid": "github/itsoulos/GlobalOptimus", "html_url": "https://rseng.github.io/software/repository/github/itsoulos/GlobalOptimus", "api_url": "https://rseng.github.io/software/api/repos/github/itsoulos/GlobalOptimus"}, {"uid": "github/oloBion/Retip", "html_url": "https://rseng.github.io/software/repository/github/oloBion/Retip", "api_url": "https://rseng.github.io/software/api/repos/github/oloBion/Retip"}, {"uid": "github/rvaser/thread_pool", "html_url": "https://rseng.github.io/software/repository/github/rvaser/thread_pool", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/thread_pool"}, {"uid": "github/rvaser/spoa", "html_url": "https://rseng.github.io/software/repository/github/rvaser/spoa", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/spoa"}, {"uid": "github/rvaser/bioparser", "html_url": "https://rseng.github.io/software/repository/github/rvaser/bioparser", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/bioparser"}, {"uid": "github/rvaser/sword", "html_url": "https://rseng.github.io/software/repository/github/rvaser/sword", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/sword"}, {"uid": "github/rvaser/rampler", "html_url": "https://rseng.github.io/software/repository/github/rvaser/rampler", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/rampler"}, {"uid": "github/JulianZDing/UniMAP", "html_url": "https://rseng.github.io/software/repository/github/JulianZDing/UniMAP", "api_url": "https://rseng.github.io/software/api/repos/github/JulianZDing/UniMAP"}, {"uid": "github/vmalnathnambiar/exfilms", "html_url": "https://rseng.github.io/software/repository/github/vmalnathnambiar/exfilms", "api_url": "https://rseng.github.io/software/api/repos/github/vmalnathnambiar/exfilms"}, {"uid": "github/ttgump/scDHMap", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDHMap", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDHMap"}, {"uid": "github/ttgump/scDeepCluster_pytorch", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDeepCluster_pytorch", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDeepCluster_pytorch"}, {"uid": "github/sfarrens/sf_deconvolve", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sf_deconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sf_deconvolve"}, {"uid": "github/sfarrens/sfof", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sfof", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sfof"}, {"uid": "github/CavendishAstrophysics/anmap", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/anmap", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/anmap"}, {"uid": "github/CavendishAstrophysics/postmortem", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/postmortem", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/postmortem"}, {"uid": "github/bokulich-lab/q2-fondue", "html_url": "https://rseng.github.io/software/repository/github/bokulich-lab/q2-fondue", "api_url": "https://rseng.github.io/software/api/repos/github/bokulich-lab/q2-fondue"}, {"uid": "github/Effective-Quadratures/Effective-Quadratures", "html_url": "https://rseng.github.io/software/repository/github/Effective-Quadratures/Effective-Quadratures", "api_url": "https://rseng.github.io/software/api/repos/github/Effective-Quadratures/Effective-Quadratures"}, {"uid": "github/JMLascar/SUSHI", "html_url": "https://rseng.github.io/software/repository/github/JMLascar/SUSHI", "api_url": "https://rseng.github.io/software/api/repos/github/JMLascar/SUSHI"}, {"uid": "github/mithun218/GiNaCDE", "html_url": "https://rseng.github.io/software/repository/github/mithun218/GiNaCDE", "api_url": "https://rseng.github.io/software/api/repos/github/mithun218/GiNaCDE"}, {"uid": "github/FZJ-PGI-12/QAOA.jl", "html_url": "https://rseng.github.io/software/repository/github/FZJ-PGI-12/QAOA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-PGI-12/QAOA.jl"}, {"uid": "github/jonathanHuwP/CrystalGrowthTracker", "html_url": "https://rseng.github.io/software/repository/github/jonathanHuwP/CrystalGrowthTracker", "api_url": "https://rseng.github.io/software/api/repos/github/jonathanHuwP/CrystalGrowthTracker"}, {"uid": "github/dmnfarrell/snpgenie", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/snpgenie", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/snpgenie"}, {"uid": "github/dmnfarrell/epitopepredict", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/epitopepredict", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/epitopepredict"}, {"uid": "github/ShubhadeepSadhukhan1993/fastSF", "html_url": "https://rseng.github.io/software/repository/github/ShubhadeepSadhukhan1993/fastSF", "api_url": "https://rseng.github.io/software/api/repos/github/ShubhadeepSadhukhan1993/fastSF"}, {"uid": "github/xuequan818/MatrixFuns.jl", "html_url": "https://rseng.github.io/software/repository/github/xuequan818/MatrixFuns.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xuequan818/MatrixFuns.jl"}, {"uid": "github/ulebreui/shark", "html_url": "https://rseng.github.io/software/repository/github/ulebreui/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ulebreui/shark"}, {"uid": "github/yaml2sbml-dev/yaml2sbml", "html_url": "https://rseng.github.io/software/repository/github/yaml2sbml-dev/yaml2sbml", "api_url": "https://rseng.github.io/software/api/repos/github/yaml2sbml-dev/yaml2sbml"}, {"uid": "github/spyder-ide/spyder", "html_url": "https://rseng.github.io/software/repository/github/spyder-ide/spyder", "api_url": "https://rseng.github.io/software/api/repos/github/spyder-ide/spyder"}, {"uid": "github/cancerit/alleleCount", "html_url": "https://rseng.github.io/software/repository/github/cancerit/alleleCount", "api_url": "https://rseng.github.io/software/api/repos/github/cancerit/alleleCount"}, {"uid": "github/hall-lab/speedseq", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/speedseq", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/speedseq"}, {"uid": "github/hall-lab/bamkit", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/bamkit", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/bamkit"}, {"uid": "github/VasilyKokorev/stardust", "html_url": "https://rseng.github.io/software/repository/github/VasilyKokorev/stardust", "api_url": "https://rseng.github.io/software/api/repos/github/VasilyKokorev/stardust"}, {"uid": "github/mjuvela/ISM", "html_url": "https://rseng.github.io/software/repository/github/mjuvela/ISM", "api_url": "https://rseng.github.io/software/api/repos/github/mjuvela/ISM"}, {"uid": "github/PlanetHunters/watson", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/watson", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/watson"}, {"uid": "github/PlanetHunters/tkmatrix", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/tkmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/tkmatrix"}, {"uid": "github/shergreen/SatGen", "html_url": "https://rseng.github.io/software/repository/github/shergreen/SatGen", "api_url": "https://rseng.github.io/software/api/repos/github/shergreen/SatGen"}, {"uid": "github/nu-radio/NuRadioMC", "html_url": "https://rseng.github.io/software/repository/github/nu-radio/NuRadioMC", "api_url": "https://rseng.github.io/software/api/repos/github/nu-radio/NuRadioMC"}, {"uid": "github/FiorenSt/AutoSourceID-Light", "html_url": "https://rseng.github.io/software/repository/github/FiorenSt/AutoSourceID-Light", "api_url": "https://rseng.github.io/software/api/repos/github/FiorenSt/AutoSourceID-Light"}, {"uid": "github/potree/PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/potree/PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/potree/PotreeConverter"}, {"uid": "github/mdlreyes/void-dwarf-analysis", "html_url": "https://rseng.github.io/software/repository/github/mdlreyes/void-dwarf-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/mdlreyes/void-dwarf-analysis"}, {"uid": "github/bioturing/hera", "html_url": "https://rseng.github.io/software/repository/github/bioturing/hera", "api_url": "https://rseng.github.io/software/api/repos/github/bioturing/hera"}, {"uid": "github/sbird/fake_spectra", "html_url": "https://rseng.github.io/software/repository/github/sbird/fake_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/fake_spectra"}, {"uid": "github/sbird/GenPK", "html_url": "https://rseng.github.io/software/repository/github/sbird/GenPK", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/GenPK"}, {"uid": "github/tmux/tmux", "html_url": "https://rseng.github.io/software/repository/github/tmux/tmux", "api_url": "https://rseng.github.io/software/api/repos/github/tmux/tmux"}, {"uid": "github/CHES2023/PyMsOfa", "html_url": "https://rseng.github.io/software/repository/github/CHES2023/PyMsOfa", "api_url": "https://rseng.github.io/software/api/repos/github/CHES2023/PyMsOfa"}, {"uid": "github/temuller/piscola", "html_url": "https://rseng.github.io/software/repository/github/temuller/piscola", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/piscola"}, {"uid": "github/temuller/hostphot", "html_url": "https://rseng.github.io/software/repository/github/temuller/hostphot", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/hostphot"}, {"uid": "github/rasg-affiliates/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/21cmSense"}, {"uid": "github/rasg-affiliates/healvis", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/healvis", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/healvis"}, {"uid": "github/SteveMacenski/slam_toolbox", "html_url": "https://rseng.github.io/software/repository/github/SteveMacenski/slam_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/SteveMacenski/slam_toolbox"}, {"uid": "github/Jingxuan97/nemesispy", "html_url": "https://rseng.github.io/software/repository/github/Jingxuan97/nemesispy", "api_url": "https://rseng.github.io/software/api/repos/github/Jingxuan97/nemesispy"}, {"uid": "github/sonjageorgievska/CClusTera", "html_url": "https://rseng.github.io/software/repository/github/sonjageorgievska/CClusTera", "api_url": "https://rseng.github.io/software/api/repos/github/sonjageorgievska/CClusTera"}, {"uid": "github/MarkMageeAstro/Riddler", "html_url": "https://rseng.github.io/software/repository/github/MarkMageeAstro/Riddler", "api_url": "https://rseng.github.io/software/api/repos/github/MarkMageeAstro/Riddler"}, {"uid": "github/pypeit/PypeIt", "html_url": "https://rseng.github.io/software/repository/github/pypeit/PypeIt", "api_url": "https://rseng.github.io/software/api/repos/github/pypeit/PypeIt"}, {"uid": "github/SchmollerLab/Cell_ACDC", "html_url": "https://rseng.github.io/software/repository/github/SchmollerLab/Cell_ACDC", "api_url": "https://rseng.github.io/software/api/repos/github/SchmollerLab/Cell_ACDC"}, {"uid": "github/rahulshah1397/LADDER", "html_url": "https://rseng.github.io/software/repository/github/rahulshah1397/LADDER", "api_url": "https://rseng.github.io/software/api/repos/github/rahulshah1397/LADDER"}, {"uid": "github/labxscut/ksak", "html_url": "https://rseng.github.io/software/repository/github/labxscut/ksak", "api_url": "https://rseng.github.io/software/api/repos/github/labxscut/ksak"}, {"uid": "github/BitSeq/BitSeq", "html_url": "https://rseng.github.io/software/repository/github/BitSeq/BitSeq", "api_url": "https://rseng.github.io/software/api/repos/github/BitSeq/BitSeq"}, {"uid": "github/pnsaevik/effluent", "html_url": "https://rseng.github.io/software/repository/github/pnsaevik/effluent", "api_url": "https://rseng.github.io/software/api/repos/github/pnsaevik/effluent"}, {"uid": "github/EBI-Metagenomics/EukCC", "html_url": "https://rseng.github.io/software/repository/github/EBI-Metagenomics/EukCC", "api_url": "https://rseng.github.io/software/api/repos/github/EBI-Metagenomics/EukCC"}, {"uid": "github/institut-de-genomique/HAPO-G", "html_url": "https://rseng.github.io/software/repository/github/institut-de-genomique/HAPO-G", "api_url": "https://rseng.github.io/software/api/repos/github/institut-de-genomique/HAPO-G"}, {"uid": "github/mscroggs/symfem", "html_url": "https://rseng.github.io/software/repository/github/mscroggs/symfem", "api_url": "https://rseng.github.io/software/api/repos/github/mscroggs/symfem"}, {"uid": "github/YosefLab/scvi-tools", "html_url": "https://rseng.github.io/software/repository/github/YosefLab/scvi-tools", "api_url": "https://rseng.github.io/software/api/repos/github/YosefLab/scvi-tools"}, {"uid": "github/cadop/seg1d", "html_url": "https://rseng.github.io/software/repository/github/cadop/seg1d", "api_url": "https://rseng.github.io/software/api/repos/github/cadop/seg1d"}, {"uid": "github/3fon3fonov/exostriker", "html_url": "https://rseng.github.io/software/repository/github/3fon3fonov/exostriker", "api_url": "https://rseng.github.io/software/api/repos/github/3fon3fonov/exostriker"}, {"uid": "github/chadagreene/Tide-Model-Driver", "html_url": "https://rseng.github.io/software/repository/github/chadagreene/Tide-Model-Driver", "api_url": "https://rseng.github.io/software/api/repos/github/chadagreene/Tide-Model-Driver"}, {"uid": "github/indraniel/fqgrep", "html_url": "https://rseng.github.io/software/repository/github/indraniel/fqgrep", "api_url": "https://rseng.github.io/software/api/repos/github/indraniel/fqgrep"}, {"uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "html_url": "https://rseng.github.io/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "api_url": "https://rseng.github.io/software/api/repos/github/AlphonsG/Rainbow-Optical-Flow-For-ALI"}, {"uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", "html_url": "https://rseng.github.io/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", "api_url": "https://rseng.github.io/software/api/repos/github/jmason86/James-s-EVE-Dimming-Index-JEDI"}, {"uid": "github/reedacartwright/dawg", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/dawg", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/dawg"}, {"uid": "github/reedacartwright/ngila", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/ngila", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/ngila"}, {"uid": "github/jiujiezz/tsnad", "html_url": "https://rseng.github.io/software/repository/github/jiujiezz/tsnad", "api_url": "https://rseng.github.io/software/api/repos/github/jiujiezz/tsnad"}, {"uid": "github/omerveille/VSMOD", "html_url": "https://rseng.github.io/software/repository/github/omerveille/VSMOD", "api_url": "https://rseng.github.io/software/api/repos/github/omerveille/VSMOD"}, {"uid": "github/dolaver/calsagos", "html_url": "https://rseng.github.io/software/repository/github/dolaver/calsagos", "api_url": "https://rseng.github.io/software/api/repos/github/dolaver/calsagos"}, {"uid": "github/chfeder/turbulence_generator", "html_url": "https://rseng.github.io/software/repository/github/chfeder/turbulence_generator", "api_url": "https://rseng.github.io/software/api/repos/github/chfeder/turbulence_generator"}, {"uid": "github/SWAT-Sheffield/SAC", "html_url": "https://rseng.github.io/software/repository/github/SWAT-Sheffield/SAC", "api_url": "https://rseng.github.io/software/api/repos/github/SWAT-Sheffield/SAC"}, {"uid": "github/qurit/rt-utils", "html_url": "https://rseng.github.io/software/repository/github/qurit/rt-utils", "api_url": "https://rseng.github.io/software/api/repos/github/qurit/rt-utils"}, {"uid": "github/jboynyc/textnets", "html_url": "https://rseng.github.io/software/repository/github/jboynyc/textnets", "api_url": "https://rseng.github.io/software/api/repos/github/jboynyc/textnets"}, {"uid": "github/metaOmics/MetaPath", "html_url": "https://rseng.github.io/software/repository/github/metaOmics/MetaPath", "api_url": "https://rseng.github.io/software/api/repos/github/metaOmics/MetaPath"}, {"uid": "github/DavidLapous/multipers", "html_url": "https://rseng.github.io/software/repository/github/DavidLapous/multipers", "api_url": "https://rseng.github.io/software/api/repos/github/DavidLapous/multipers"}, {"uid": "github/SDTC-CPMed/scDrugPrio", "html_url": "https://rseng.github.io/software/repository/github/SDTC-CPMed/scDrugPrio", "api_url": "https://rseng.github.io/software/api/repos/github/SDTC-CPMed/scDrugPrio"}, {"uid": "github/marinebon/obisindicators", "html_url": "https://rseng.github.io/software/repository/github/marinebon/obisindicators", "api_url": "https://rseng.github.io/software/api/repos/github/marinebon/obisindicators"}, {"uid": "github/ntveem/sterile-dm", "html_url": "https://rseng.github.io/software/repository/github/ntveem/sterile-dm", "api_url": "https://rseng.github.io/software/api/repos/github/ntveem/sterile-dm"}, {"uid": "github/buschlab/fhirspark", "html_url": "https://rseng.github.io/software/repository/github/buschlab/fhirspark", "api_url": "https://rseng.github.io/software/api/repos/github/buschlab/fhirspark"}, {"uid": "github/CompiledAtBirth/pyCARPool", "html_url": "https://rseng.github.io/software/repository/github/CompiledAtBirth/pyCARPool", "api_url": "https://rseng.github.io/software/api/repos/github/CompiledAtBirth/pyCARPool"}, {"uid": "github/Yu606/odyssey", "html_url": "https://rseng.github.io/software/repository/github/Yu606/odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/Yu606/odyssey"}, {"uid": "github/BrownDwarf/gollum", "html_url": "https://rseng.github.io/software/repository/github/BrownDwarf/gollum", "api_url": "https://rseng.github.io/software/api/repos/github/BrownDwarf/gollum"}, {"uid": "github/tronsgaard/barycorr", "html_url": "https://rseng.github.io/software/repository/github/tronsgaard/barycorr", "api_url": "https://rseng.github.io/software/api/repos/github/tronsgaard/barycorr"}, {"uid": "github/xoopR/set6", "html_url": "https://rseng.github.io/software/repository/github/xoopR/set6", "api_url": "https://rseng.github.io/software/api/repos/github/xoopR/set6"}, {"uid": "github/cvjena/JeFaPaTo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/JeFaPaTo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/JeFaPaTo"}, {"uid": "github/cvjena/freestylo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/freestylo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/freestylo"}, {"uid": "github/HadrienG/InSilicoSeq", "html_url": "https://rseng.github.io/software/repository/github/HadrienG/InSilicoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HadrienG/InSilicoSeq"}, {"uid": "github/sjteresi/TE_Density", "html_url": "https://rseng.github.io/software/repository/github/sjteresi/TE_Density", "api_url": "https://rseng.github.io/software/api/repos/github/sjteresi/TE_Density"}, {"uid": "github/opencobra/cobrapy", "html_url": "https://rseng.github.io/software/repository/github/opencobra/cobrapy", "api_url": "https://rseng.github.io/software/api/repos/github/opencobra/cobrapy"}, {"uid": "github/onnela-lab/beiwe-backend", "html_url": "https://rseng.github.io/software/repository/github/onnela-lab/beiwe-backend", "api_url": "https://rseng.github.io/software/api/repos/github/onnela-lab/beiwe-backend"}, {"uid": "github/justincfeng/PoMiN", "html_url": "https://rseng.github.io/software/repository/github/justincfeng/PoMiN", "api_url": "https://rseng.github.io/software/api/repos/github/justincfeng/PoMiN"}, {"uid": "github/raredd/kmdata", "html_url": "https://rseng.github.io/software/repository/github/raredd/kmdata", "api_url": "https://rseng.github.io/software/api/repos/github/raredd/kmdata"}, {"uid": "github/v-morello/riptide", "html_url": "https://rseng.github.io/software/repository/github/v-morello/riptide", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/riptide"}, {"uid": "github/v-morello/clfd", "html_url": "https://rseng.github.io/software/repository/github/v-morello/clfd", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/clfd"}, {"uid": "github/v-morello/iqrm", "html_url": "https://rseng.github.io/software/repository/github/v-morello/iqrm", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/iqrm"}, {"uid": "github/francescoa97outlook/pyExoRaMa", "html_url": "https://rseng.github.io/software/repository/github/francescoa97outlook/pyExoRaMa", "api_url": "https://rseng.github.io/software/api/repos/github/francescoa97outlook/pyExoRaMa"}, {"uid": "github/cboursnell/crb-blast", "html_url": "https://rseng.github.io/software/repository/github/cboursnell/crb-blast", "api_url": "https://rseng.github.io/software/api/repos/github/cboursnell/crb-blast"}, {"uid": "github/LuisScoccola/persistable", "html_url": "https://rseng.github.io/software/repository/github/LuisScoccola/persistable", "api_url": "https://rseng.github.io/software/api/repos/github/LuisScoccola/persistable"}, {"uid": "github/bwinkel/cygrid", "html_url": "https://rseng.github.io/software/repository/github/bwinkel/cygrid", "api_url": "https://rseng.github.io/software/api/repos/github/bwinkel/cygrid"}, {"uid": "github/PaulSt/NGSTrefftz", "html_url": "https://rseng.github.io/software/repository/github/PaulSt/NGSTrefftz", "api_url": "https://rseng.github.io/software/api/repos/github/PaulSt/NGSTrefftz"}, {"uid": "github/jianlin-cheng/DRCon", "html_url": "https://rseng.github.io/software/repository/github/jianlin-cheng/DRCon", "api_url": "https://rseng.github.io/software/api/repos/github/jianlin-cheng/DRCon"}, {"uid": "github/lucaborsato/trades", "html_url": "https://rseng.github.io/software/repository/github/lucaborsato/trades", "api_url": "https://rseng.github.io/software/api/repos/github/lucaborsato/trades"}, {"uid": "github/TORCH-Consortium/MAGMA", "html_url": "https://rseng.github.io/software/repository/github/TORCH-Consortium/MAGMA", "api_url": "https://rseng.github.io/software/api/repos/github/TORCH-Consortium/MAGMA"}, {"uid": "github/hansenjohnson/WhaleMap", "html_url": "https://rseng.github.io/software/repository/github/hansenjohnson/WhaleMap", "api_url": "https://rseng.github.io/software/api/repos/github/hansenjohnson/WhaleMap"}, {"uid": "github/JeremyLezmy/hypergal", "html_url": "https://rseng.github.io/software/repository/github/JeremyLezmy/hypergal", "api_url": "https://rseng.github.io/software/api/repos/github/JeremyLezmy/hypergal"}, {"uid": "github/lofar-astron/DP3", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/DP3", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/DP3"}, {"uid": "github/lofar-astron/RMextract", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/RMextract", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/RMextract"}, {"uid": "github/statsmodels/statsmodels", "html_url": "https://rseng.github.io/software/repository/github/statsmodels/statsmodels", "api_url": "https://rseng.github.io/software/api/repos/github/statsmodels/statsmodels"}, {"uid": "github/weber1158/eds-classification", "html_url": "https://rseng.github.io/software/repository/github/weber1158/eds-classification", "api_url": "https://rseng.github.io/software/api/repos/github/weber1158/eds-classification"}, {"uid": "github/mpi4jax/mpi4jax", "html_url": "https://rseng.github.io/software/repository/github/mpi4jax/mpi4jax", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4jax/mpi4jax"}, {"uid": "github/JamieDietrich/dynamite", "html_url": "https://rseng.github.io/software/repository/github/JamieDietrich/dynamite", "api_url": "https://rseng.github.io/software/api/repos/github/JamieDietrich/dynamite"}, {"uid": "github/pcingola/SnpEff", "html_url": "https://rseng.github.io/software/repository/github/pcingola/SnpEff", "api_url": "https://rseng.github.io/software/api/repos/github/pcingola/SnpEff"}, {"uid": "github/GRChombo/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRFolres"}, {"uid": "github/GRChombo/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRChombo"}, {"uid": "github/GRChombo/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRDzhadzha"}, {"uid": "github/dolfin-adjoint/pyadjoint", "html_url": "https://rseng.github.io/software/repository/github/dolfin-adjoint/pyadjoint", "api_url": "https://rseng.github.io/software/api/repos/github/dolfin-adjoint/pyadjoint"}, {"uid": "github/genner-lab/meta-fish-lib", "html_url": "https://rseng.github.io/software/repository/github/genner-lab/meta-fish-lib", "api_url": "https://rseng.github.io/software/api/repos/github/genner-lab/meta-fish-lib"}, {"uid": "github/dparks1134/RefineM", "html_url": "https://rseng.github.io/software/repository/github/dparks1134/RefineM", "api_url": "https://rseng.github.io/software/api/repos/github/dparks1134/RefineM"}, {"uid": "github/LidkeLab/matlab-instrument-control", "html_url": "https://rseng.github.io/software/repository/github/LidkeLab/matlab-instrument-control", "api_url": "https://rseng.github.io/software/api/repos/github/LidkeLab/matlab-instrument-control"}, {"uid": "github/marcelm/cutadapt", "html_url": "https://rseng.github.io/software/repository/github/marcelm/cutadapt", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/cutadapt"}, {"uid": "github/marcelm/dnaio", "html_url": "https://rseng.github.io/software/repository/github/marcelm/dnaio", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/dnaio"}, {"uid": "github/marcelm/tinyalign", "html_url": "https://rseng.github.io/software/repository/github/marcelm/tinyalign", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/tinyalign"}, {"uid": "github/marcelm/alignlib", "html_url": "https://rseng.github.io/software/repository/github/marcelm/alignlib", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/alignlib"}, {"uid": "github/fjankowsk/fitpdf", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/fitpdf", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/fitpdf"}, {"uid": "github/fjankowsk/scatfit", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/scatfit", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/scatfit"}, {"uid": "github/nugent-lab/FindPOTATOS-stable", "html_url": "https://rseng.github.io/software/repository/github/nugent-lab/FindPOTATOS-stable", "api_url": "https://rseng.github.io/software/api/repos/github/nugent-lab/FindPOTATOS-stable"}, {"uid": "github/pfaucon/PBSIM-PacBio-Simulator", "html_url": "https://rseng.github.io/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/pfaucon/PBSIM-PacBio-Simulator"}, {"uid": "github/federicomarulli/CosmoBolognaLib", "html_url": "https://rseng.github.io/software/repository/github/federicomarulli/CosmoBolognaLib", "api_url": "https://rseng.github.io/software/api/repos/github/federicomarulli/CosmoBolognaLib"}, {"uid": "github/LiesaSalzer/MobilityTransformR", "html_url": "https://rseng.github.io/software/repository/github/LiesaSalzer/MobilityTransformR", "api_url": "https://rseng.github.io/software/api/repos/github/LiesaSalzer/MobilityTransformR"}, {"uid": "github/siminegroup/E2EDNA2", "html_url": "https://rseng.github.io/software/repository/github/siminegroup/E2EDNA2", "api_url": "https://rseng.github.io/software/api/repos/github/siminegroup/E2EDNA2"}, {"uid": "github/tum-pbs/PhiML", "html_url": "https://rseng.github.io/software/repository/github/tum-pbs/PhiML", "api_url": "https://rseng.github.io/software/api/repos/github/tum-pbs/PhiML"}, {"uid": "github/COBRAPROsimulator/COBRAPRO", "html_url": "https://rseng.github.io/software/repository/github/COBRAPROsimulator/COBRAPRO", "api_url": "https://rseng.github.io/software/api/repos/github/COBRAPROsimulator/COBRAPRO"}, {"uid": "github/complextissue/pytximport", "html_url": "https://rseng.github.io/software/repository/github/complextissue/pytximport", "api_url": "https://rseng.github.io/software/api/repos/github/complextissue/pytximport"}, {"uid": "github/carlacupcake/hashin_shtrikman_mp", "html_url": "https://rseng.github.io/software/repository/github/carlacupcake/hashin_shtrikman_mp", "api_url": "https://rseng.github.io/software/api/repos/github/carlacupcake/hashin_shtrikman_mp"}, {"uid": "github/jmsdsouzaPhD/GWDALI", "html_url": "https://rseng.github.io/software/repository/github/jmsdsouzaPhD/GWDALI", "api_url": "https://rseng.github.io/software/api/repos/github/jmsdsouzaPhD/GWDALI"}, {"uid": "github/JuliaSmoothOptimizers/DCISolver.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/DCISolver.jl"}, {"uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/PDENLPModels.jl"}, {"uid": "github/MetazoaPhylogenomicsLab/FANTASIA", "html_url": "https://rseng.github.io/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", "api_url": "https://rseng.github.io/software/api/repos/github/MetazoaPhylogenomicsLab/FANTASIA"}, {"uid": "github/cdslaborg/paramonte", "html_url": "https://rseng.github.io/software/repository/github/cdslaborg/paramonte", "api_url": "https://rseng.github.io/software/api/repos/github/cdslaborg/paramonte"}, {"uid": "github/yuhuan-wu/mobilesal", "html_url": "https://rseng.github.io/software/repository/github/yuhuan-wu/mobilesal", "api_url": "https://rseng.github.io/software/api/repos/github/yuhuan-wu/mobilesal"}, {"uid": "github/Keck-DataReductionPipelines/KcwiDRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KcwiDRP"}, {"uid": "github/Keck-DataReductionPipelines/KCWI_DRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KCWI_DRP"}, {"uid": "github/LCOGT/banzai", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai"}, {"uid": "github/LCOGT/neoexchange", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/neoexchange", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/neoexchange"}, {"uid": "github/LCOGT/banzai-nres", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai-nres", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai-nres"}, {"uid": "github/twosixlabs/magicwand-datatool", "html_url": "https://rseng.github.io/software/repository/github/twosixlabs/magicwand-datatool", "api_url": "https://rseng.github.io/software/api/repos/github/twosixlabs/magicwand-datatool"}, {"uid": "github/linuxscout/pyarabic", "html_url": "https://rseng.github.io/software/repository/github/linuxscout/pyarabic", "api_url": "https://rseng.github.io/software/api/repos/github/linuxscout/pyarabic"}, {"uid": "github/MRCIEU/metaboprep", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/metaboprep", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/metaboprep"}, {"uid": "github/MRCIEU/PHESANT", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/PHESANT", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/PHESANT"}, {"uid": "github/bobleesj/cifkit", "html_url": "https://rseng.github.io/software/repository/github/bobleesj/cifkit", "api_url": "https://rseng.github.io/software/api/repos/github/bobleesj/cifkit"}, {"uid": "github/MFaymon/spINAR", "html_url": "https://rseng.github.io/software/repository/github/MFaymon/spINAR", "api_url": "https://rseng.github.io/software/api/repos/github/MFaymon/spINAR"}, {"uid": "github/streamlit/streamlit", "html_url": "https://rseng.github.io/software/repository/github/streamlit/streamlit", "api_url": "https://rseng.github.io/software/api/repos/github/streamlit/streamlit"}, {"uid": "github/el2718/FastQSL", "html_url": "https://rseng.github.io/software/repository/github/el2718/FastQSL", "api_url": "https://rseng.github.io/software/api/repos/github/el2718/FastQSL"}, {"uid": "github/datalad/datalad", "html_url": "https://rseng.github.io/software/repository/github/datalad/datalad", "api_url": "https://rseng.github.io/software/api/repos/github/datalad/datalad"}, {"uid": "github/tribshms/tRIBS", "html_url": "https://rseng.github.io/software/repository/github/tribshms/tRIBS", "api_url": "https://rseng.github.io/software/api/repos/github/tribshms/tRIBS"}, {"uid": "github/azizka/IUCNN", "html_url": "https://rseng.github.io/software/repository/github/azizka/IUCNN", "api_url": "https://rseng.github.io/software/api/repos/github/azizka/IUCNN"}, {"uid": "github/hope-data-science/tidyfst", "html_url": "https://rseng.github.io/software/repository/github/hope-data-science/tidyfst", "api_url": "https://rseng.github.io/software/api/repos/github/hope-data-science/tidyfst"}, {"uid": "github/danielemelini/ALMA3", "html_url": "https://rseng.github.io/software/repository/github/danielemelini/ALMA3", "api_url": "https://rseng.github.io/software/api/repos/github/danielemelini/ALMA3"}, {"uid": "github/jalombar/starsmasher", "html_url": "https://rseng.github.io/software/repository/github/jalombar/starsmasher", "api_url": "https://rseng.github.io/software/api/repos/github/jalombar/starsmasher"}, {"uid": "github/scipion-em/scipion-em-continuousflex", "html_url": "https://rseng.github.io/software/repository/github/scipion-em/scipion-em-continuousflex", "api_url": "https://rseng.github.io/software/api/repos/github/scipion-em/scipion-em-continuousflex"}, {"uid": "github/Bios4Biol/intronSeeker", "html_url": "https://rseng.github.io/software/repository/github/Bios4Biol/intronSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/Bios4Biol/intronSeeker"}, {"uid": "github/vitor-de-oliveira/rheovolution", "html_url": "https://rseng.github.io/software/repository/github/vitor-de-oliveira/rheovolution", "api_url": "https://rseng.github.io/software/api/repos/github/vitor-de-oliveira/rheovolution"}, {"uid": "github/Single-Cell-Graph-Learning/scSGL", "html_url": "https://rseng.github.io/software/repository/github/Single-Cell-Graph-Learning/scSGL", "api_url": "https://rseng.github.io/software/api/repos/github/Single-Cell-Graph-Learning/scSGL"}, {"uid": "github/benmontet/f3", "html_url": "https://rseng.github.io/software/repository/github/benmontet/f3", "api_url": "https://rseng.github.io/software/api/repos/github/benmontet/f3"}, {"uid": "github/ShaunFell/GRBoondi", "html_url": "https://rseng.github.io/software/repository/github/ShaunFell/GRBoondi", "api_url": "https://rseng.github.io/software/api/repos/github/ShaunFell/GRBoondi"}, {"uid": "github/thorstone25/qups", "html_url": "https://rseng.github.io/software/repository/github/thorstone25/qups", "api_url": "https://rseng.github.io/software/api/repos/github/thorstone25/qups"}, {"uid": "github/pfeinsper/drone-swarm-search", "html_url": "https://rseng.github.io/software/repository/github/pfeinsper/drone-swarm-search", "api_url": "https://rseng.github.io/software/api/repos/github/pfeinsper/drone-swarm-search"}, {"uid": "github/yukiteruono/pbsim2", "html_url": "https://rseng.github.io/software/repository/github/yukiteruono/pbsim2", "api_url": "https://rseng.github.io/software/api/repos/github/yukiteruono/pbsim2"}, {"uid": "github/Cadaei-Yuvxvs/OSHy-X", "html_url": "https://rseng.github.io/software/repository/github/Cadaei-Yuvxvs/OSHy-X", "api_url": "https://rseng.github.io/software/api/repos/github/Cadaei-Yuvxvs/OSHy-X"}, {"uid": "github/spastras/galclass", "html_url": "https://rseng.github.io/software/repository/github/spastras/galclass", "api_url": "https://rseng.github.io/software/api/repos/github/spastras/galclass"}, {"uid": "github/Illumina/ExpansionHunterDenovo", "html_url": "https://rseng.github.io/software/repository/github/Illumina/ExpansionHunterDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/ExpansionHunterDenovo"}, {"uid": "github/Illumina/SpliceAI", "html_url": "https://rseng.github.io/software/repository/github/Illumina/SpliceAI", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/SpliceAI"}, {"uid": "github/Illumina/akt", "html_url": "https://rseng.github.io/software/repository/github/Illumina/akt", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/akt"}, {"uid": "github/Illumina/manta", "html_url": "https://rseng.github.io/software/repository/github/Illumina/manta", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/manta"}, {"uid": "github/Illumina/canvas", "html_url": "https://rseng.github.io/software/repository/github/Illumina/canvas", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/canvas"}, {"uid": "github/Illumina/MarViN", "html_url": "https://rseng.github.io/software/repository/github/Illumina/MarViN", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/MarViN"}, {"uid": "github/Illumina/strelka", "html_url": "https://rseng.github.io/software/repository/github/Illumina/strelka", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/strelka"}, {"uid": "github/neurogeriatricskiel/NGMT", "html_url": "https://rseng.github.io/software/repository/github/neurogeriatricskiel/NGMT", "api_url": "https://rseng.github.io/software/api/repos/github/neurogeriatricskiel/NGMT"}, {"uid": "github/ADThomas-astro/oxaf", "html_url": "https://rseng.github.io/software/repository/github/ADThomas-astro/oxaf", "api_url": "https://rseng.github.io/software/api/repos/github/ADThomas-astro/oxaf"}, {"uid": "github/Open-Minds-Lab/MRdataset", "html_url": "https://rseng.github.io/software/repository/github/Open-Minds-Lab/MRdataset", "api_url": "https://rseng.github.io/software/api/repos/github/Open-Minds-Lab/MRdataset"}, {"uid": "github/Jane110111107/IsoTree", "html_url": "https://rseng.github.io/software/repository/github/Jane110111107/IsoTree", "api_url": "https://rseng.github.io/software/api/repos/github/Jane110111107/IsoTree"}, {"uid": "github/maayane/catsHTM", "html_url": "https://rseng.github.io/software/repository/github/maayane/catsHTM", "api_url": "https://rseng.github.io/software/api/repos/github/maayane/catsHTM"}, {"uid": "github/drupke/questfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/questfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/questfit"}, {"uid": "github/drupke/ifsred", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsred", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsred"}, {"uid": "github/drupke/ifsfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsfit"}, {"uid": "github/cjneely10/EukMetaSanity", "html_url": "https://rseng.github.io/software/repository/github/cjneely10/EukMetaSanity", "api_url": "https://rseng.github.io/software/api/repos/github/cjneely10/EukMetaSanity"}, {"uid": "github/asmusskar/ALVA", "html_url": "https://rseng.github.io/software/repository/github/asmusskar/ALVA", "api_url": "https://rseng.github.io/software/api/repos/github/asmusskar/ALVA"}, {"uid": "github/huangnengCSU/compleasm", "html_url": "https://rseng.github.io/software/repository/github/huangnengCSU/compleasm", "api_url": "https://rseng.github.io/software/api/repos/github/huangnengCSU/compleasm"}, {"uid": "github/lijing28101/maize_pyrpipe", "html_url": "https://rseng.github.io/software/repository/github/lijing28101/maize_pyrpipe", "api_url": "https://rseng.github.io/software/api/repos/github/lijing28101/maize_pyrpipe"}, {"uid": "github/ymocquar/HOODESolver.jl", "html_url": "https://rseng.github.io/software/repository/github/ymocquar/HOODESolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ymocquar/HOODESolver.jl"}, {"uid": "github/dfm/corner.py", "html_url": "https://rseng.github.io/software/repository/github/dfm/corner.py", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/corner.py"}, {"uid": "github/dfm/ketu", "html_url": "https://rseng.github.io/software/repository/github/dfm/ketu", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/ketu"}, {"uid": "github/dfm/photodynam", "html_url": "https://rseng.github.io/software/repository/github/dfm/photodynam", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/photodynam"}, {"uid": "github/dfm/exopop", "html_url": "https://rseng.github.io/software/repository/github/dfm/exopop", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/exopop"}, {"uid": "github/dfm/celerite", "html_url": "https://rseng.github.io/software/repository/github/dfm/celerite", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/celerite"}, {"uid": "github/N-BodyShop/smooth", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/smooth", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/smooth"}, {"uid": "github/N-BodyShop/fof", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/fof", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/fof"}, {"uid": "github/marver17/DICOMSEG_Converter", "html_url": "https://rseng.github.io/software/repository/github/marver17/DICOMSEG_Converter", "api_url": "https://rseng.github.io/software/api/repos/github/marver17/DICOMSEG_Converter"}, {"uid": "github/CederGroupHub/smol", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/smol", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/smol"}, {"uid": "github/CederGroupHub/sparse-lm", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/sparse-lm", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/sparse-lm"}, {"uid": "github/skyfielders/python-skyfield", "html_url": "https://rseng.github.io/software/repository/github/skyfielders/python-skyfield", "api_url": "https://rseng.github.io/software/api/repos/github/skyfielders/python-skyfield"}, {"uid": "github/bcjaeger/aorsf", "html_url": "https://rseng.github.io/software/repository/github/bcjaeger/aorsf", "api_url": "https://rseng.github.io/software/api/repos/github/bcjaeger/aorsf"}, {"uid": "github/UcarLab/AMULET", "html_url": "https://rseng.github.io/software/repository/github/UcarLab/AMULET", "api_url": "https://rseng.github.io/software/api/repos/github/UcarLab/AMULET"}, {"uid": "github/feature-engine/feature_engine", "html_url": "https://rseng.github.io/software/repository/github/feature-engine/feature_engine", "api_url": "https://rseng.github.io/software/api/repos/github/feature-engine/feature_engine"}, {"uid": "github/SERVIR/servir-aces", "html_url": "https://rseng.github.io/software/repository/github/SERVIR/servir-aces", "api_url": "https://rseng.github.io/software/api/repos/github/SERVIR/servir-aces"}, {"uid": "github/rdpstaff/AlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/AlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/AlignmentTools"}, {"uid": "github/rdpstaff/classifier", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/classifier", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/classifier"}, {"uid": "github/rdpstaff/ReadSeq", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/ReadSeq", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/ReadSeq"}, {"uid": "github/rdpstaff/TaxonomyTree", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/TaxonomyTree", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/TaxonomyTree"}, {"uid": "github/igrins/plp", "html_url": "https://rseng.github.io/software/repository/github/igrins/plp", "api_url": "https://rseng.github.io/software/api/repos/github/igrins/plp"}, {"uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", "html_url": "https://rseng.github.io/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", "api_url": "https://rseng.github.io/software/api/repos/github/FSEC-Photovoltaics/pvrpm-lcoe"}, {"uid": "github/mzytnicki/srnaMapper", "html_url": "https://rseng.github.io/software/repository/github/mzytnicki/srnaMapper", "api_url": "https://rseng.github.io/software/api/repos/github/mzytnicki/srnaMapper"}, {"uid": "github/gromacs/gromacs", "html_url": "https://rseng.github.io/software/repository/github/gromacs/gromacs", "api_url": "https://rseng.github.io/software/api/repos/github/gromacs/gromacs"}, {"uid": "github/brainets/frites", "html_url": "https://rseng.github.io/software/repository/github/brainets/frites", "api_url": "https://rseng.github.io/software/api/repos/github/brainets/frites"}, {"uid": "github/reizio/reiz.io", "html_url": "https://rseng.github.io/software/repository/github/reizio/reiz.io", "api_url": "https://rseng.github.io/software/api/repos/github/reizio/reiz.io"}, {"uid": "github/dartoon/galight", "html_url": "https://rseng.github.io/software/repository/github/dartoon/galight", "api_url": "https://rseng.github.io/software/api/repos/github/dartoon/galight"}, {"uid": "github/elizabethnewman/hessQuik", "html_url": "https://rseng.github.io/software/repository/github/elizabethnewman/hessQuik", "api_url": "https://rseng.github.io/software/api/repos/github/elizabethnewman/hessQuik"}, {"uid": "github/range-et/PGL", "html_url": "https://rseng.github.io/software/repository/github/range-et/PGL", "api_url": "https://rseng.github.io/software/api/repos/github/range-et/PGL"}, {"uid": "github/astroweaver/the_farmer", "html_url": "https://rseng.github.io/software/repository/github/astroweaver/the_farmer", "api_url": "https://rseng.github.io/software/api/repos/github/astroweaver/the_farmer"}, {"uid": "github/fmicompbio/ez_zarr", "html_url": "https://rseng.github.io/software/repository/github/fmicompbio/ez_zarr", "api_url": "https://rseng.github.io/software/api/repos/github/fmicompbio/ez_zarr"}, {"uid": "github/Electrostatics/apbs", "html_url": "https://rseng.github.io/software/repository/github/Electrostatics/apbs", "api_url": "https://rseng.github.io/software/api/repos/github/Electrostatics/apbs"}, {"uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeodynamics/GeophysicalModelGenerator.jl"}, {"uid": "github/pyccel/pyccel", "html_url": "https://rseng.github.io/software/repository/github/pyccel/pyccel", "api_url": "https://rseng.github.io/software/api/repos/github/pyccel/pyccel"}, {"uid": "github/hiddenSymmetries/simsopt", "html_url": "https://rseng.github.io/software/repository/github/hiddenSymmetries/simsopt", "api_url": "https://rseng.github.io/software/api/repos/github/hiddenSymmetries/simsopt"}, {"uid": "github/tbrown122387/pf", "html_url": "https://rseng.github.io/software/repository/github/tbrown122387/pf", "api_url": "https://rseng.github.io/software/api/repos/github/tbrown122387/pf"}, {"uid": "github/tresoldi/ngesh", "html_url": "https://rseng.github.io/software/repository/github/tresoldi/ngesh", "api_url": "https://rseng.github.io/software/api/repos/github/tresoldi/ngesh"}, {"uid": "github/geoffryan/afterglowpy", "html_url": "https://rseng.github.io/software/repository/github/geoffryan/afterglowpy", "api_url": "https://rseng.github.io/software/api/repos/github/geoffryan/afterglowpy"}, {"uid": "github/UNSW-CEEM/nempy", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/nempy", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/nempy"}, {"uid": "github/UNSW-CEEM/NEMSEER", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/NEMSEER", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/NEMSEER"}, {"uid": "github/lammps/lammps", "html_url": "https://rseng.github.io/software/repository/github/lammps/lammps", "api_url": "https://rseng.github.io/software/api/repos/github/lammps/lammps"}, {"uid": "github/kim554/wdec", "html_url": "https://rseng.github.io/software/repository/github/kim554/wdec", "api_url": "https://rseng.github.io/software/api/repos/github/kim554/wdec"}, {"uid": "github/SharmaLlama/ticktack", "html_url": "https://rseng.github.io/software/repository/github/SharmaLlama/ticktack", "api_url": "https://rseng.github.io/software/api/repos/github/SharmaLlama/ticktack"}, {"uid": "github/tamarervin/SolAster", "html_url": "https://rseng.github.io/software/repository/github/tamarervin/SolAster", "api_url": "https://rseng.github.io/software/api/repos/github/tamarervin/SolAster"}, {"uid": "github/dgrun/FateID", "html_url": "https://rseng.github.io/software/repository/github/dgrun/FateID", "api_url": "https://rseng.github.io/software/api/repos/github/dgrun/FateID"}, {"uid": "github/backyardworlds/wiseview", "html_url": "https://rseng.github.io/software/repository/github/backyardworlds/wiseview", "api_url": "https://rseng.github.io/software/api/repos/github/backyardworlds/wiseview"}, {"uid": "github/precice/aste", "html_url": "https://rseng.github.io/software/repository/github/precice/aste", "api_url": "https://rseng.github.io/software/api/repos/github/precice/aste"}, {"uid": "github/precice/micro-manager", "html_url": "https://rseng.github.io/software/repository/github/precice/micro-manager", "api_url": "https://rseng.github.io/software/api/repos/github/precice/micro-manager"}, {"uid": "github/huishenlab/biscuit", "html_url": "https://rseng.github.io/software/repository/github/huishenlab/biscuit", "api_url": "https://rseng.github.io/software/api/repos/github/huishenlab/biscuit"}, {"uid": "github/intelligent-soft-robots/o80", "html_url": "https://rseng.github.io/software/repository/github/intelligent-soft-robots/o80", "api_url": "https://rseng.github.io/software/api/repos/github/intelligent-soft-robots/o80"}, {"uid": "github/Starfish-develop/Starfish", "html_url": "https://rseng.github.io/software/repository/github/Starfish-develop/Starfish", "api_url": "https://rseng.github.io/software/api/repos/github/Starfish-develop/Starfish"}, {"uid": "github/lllangWV/ParquetDB", "html_url": "https://rseng.github.io/software/repository/github/lllangWV/ParquetDB", "api_url": "https://rseng.github.io/software/api/repos/github/lllangWV/ParquetDB"}, {"uid": "github/interactivereport/OmicsView0", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/OmicsView0", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/OmicsView0"}, {"uid": "github/interactivereport/scRNASequest", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/scRNASequest", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/scRNASequest"}, {"uid": "github/ashleychontos/pySYD", "html_url": "https://rseng.github.io/software/repository/github/ashleychontos/pySYD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleychontos/pySYD"}, {"uid": "github/venkateshgopinath/FAlCon-DNS", "html_url": "https://rseng.github.io/software/repository/github/venkateshgopinath/FAlCon-DNS", "api_url": "https://rseng.github.io/software/api/repos/github/venkateshgopinath/FAlCon-DNS"}, {"uid": "github/reneheller/pile-up", "html_url": "https://rseng.github.io/software/repository/github/reneheller/pile-up", "api_url": "https://rseng.github.io/software/api/repos/github/reneheller/pile-up"}, {"uid": "github/gnave/Xgremlin", "html_url": "https://rseng.github.io/software/repository/github/gnave/Xgremlin", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/Xgremlin"}, {"uid": "github/gnave/pybranch", "html_url": "https://rseng.github.io/software/repository/github/gnave/pybranch", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/pybranch"}, {"uid": "github/ericmandel/funtools", "html_url": "https://rseng.github.io/software/repository/github/ericmandel/funtools", "api_url": "https://rseng.github.io/software/api/repos/github/ericmandel/funtools"}, {"uid": "github/Jayshil/pycdata", "html_url": "https://rseng.github.io/software/repository/github/Jayshil/pycdata", "api_url": "https://rseng.github.io/software/api/repos/github/Jayshil/pycdata"}, {"uid": "github/plazar/coast_guard", "html_url": "https://rseng.github.io/software/repository/github/plazar/coast_guard", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/coast_guard"}, {"uid": "github/plazar/TOASTER", "html_url": "https://rseng.github.io/software/repository/github/plazar/TOASTER", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/TOASTER"}, {"uid": "github/vinisalazar/metaphor", "html_url": "https://rseng.github.io/software/repository/github/vinisalazar/metaphor", "api_url": "https://rseng.github.io/software/api/repos/github/vinisalazar/metaphor"}, {"uid": "github/MIT-LAE/TASOPT.jl", "html_url": "https://rseng.github.io/software/repository/github/MIT-LAE/TASOPT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-LAE/TASOPT.jl"}, {"uid": "github/jpierel14/sntd", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/sntd", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/sntd"}, {"uid": "github/jpierel14/snsed", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/snsed", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/snsed"}, {"uid": "github/sharmalab/eaglescope", "html_url": "https://rseng.github.io/software/repository/github/sharmalab/eaglescope", "api_url": "https://rseng.github.io/software/api/repos/github/sharmalab/eaglescope"}, {"uid": "github/tp2vis/distribute", "html_url": "https://rseng.github.io/software/repository/github/tp2vis/distribute", "api_url": "https://rseng.github.io/software/api/repos/github/tp2vis/distribute"}, {"uid": "github/cmillion/gPhoton", "html_url": "https://rseng.github.io/software/repository/github/cmillion/gPhoton", "api_url": "https://rseng.github.io/software/api/repos/github/cmillion/gPhoton"}, {"uid": "github/q1cui/discourseGT", "html_url": "https://rseng.github.io/software/repository/github/q1cui/discourseGT", "api_url": "https://rseng.github.io/software/api/repos/github/q1cui/discourseGT"}, {"uid": "github/ialbert/genescape-central", "html_url": "https://rseng.github.io/software/repository/github/ialbert/genescape-central", "api_url": "https://rseng.github.io/software/api/repos/github/ialbert/genescape-central"}, {"uid": "github/ageller/firefly", "html_url": "https://rseng.github.io/software/repository/github/ageller/firefly", "api_url": "https://rseng.github.io/software/api/repos/github/ageller/firefly"}, {"uid": "github/cov-lineages/pangoLEARN", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangoLEARN", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangoLEARN"}, {"uid": "github/cov-lineages/pangolin", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangolin"}, {"uid": "github/HERA-Team/matvis", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/matvis", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/matvis"}, {"uid": "github/HERA-Team/aipy", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/aipy", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/aipy"}, {"uid": "github/HERA-Team/hera_opm", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/hera_opm", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/hera_opm"}, {"uid": "github/jpuritz/dDocent", "html_url": "https://rseng.github.io/software/repository/github/jpuritz/dDocent", "api_url": "https://rseng.github.io/software/api/repos/github/jpuritz/dDocent"}, {"uid": "github/google/flax", "html_url": "https://rseng.github.io/software/repository/github/google/flax", "api_url": "https://rseng.github.io/software/api/repos/github/google/flax"}, {"uid": "github/google/best", "html_url": "https://rseng.github.io/software/repository/github/google/best", "api_url": "https://rseng.github.io/software/api/repos/github/google/best"}, {"uid": "github/google/caliban", "html_url": "https://rseng.github.io/software/repository/github/google/caliban", "api_url": "https://rseng.github.io/software/api/repos/github/google/caliban"}, {"uid": "github/google/jax", "html_url": "https://rseng.github.io/software/repository/github/google/jax", "api_url": "https://rseng.github.io/software/api/repos/github/google/jax"}, {"uid": "github/beastraban/INSANE", "html_url": "https://rseng.github.io/software/repository/github/beastraban/INSANE", "api_url": "https://rseng.github.io/software/api/repos/github/beastraban/INSANE"}, {"uid": "github/manchunyeung/wolensing", "html_url": "https://rseng.github.io/software/repository/github/manchunyeung/wolensing", "api_url": "https://rseng.github.io/software/api/repos/github/manchunyeung/wolensing"}, {"uid": "github/vosjo/speedyfit", "html_url": "https://rseng.github.io/software/repository/github/vosjo/speedyfit", "api_url": "https://rseng.github.io/software/api/repos/github/vosjo/speedyfit"}, {"uid": "github/marziarivi/RadioLensfit2", "html_url": "https://rseng.github.io/software/repository/github/marziarivi/RadioLensfit2", "api_url": "https://rseng.github.io/software/api/repos/github/marziarivi/RadioLensfit2"}, {"uid": "github/aaryapatil/tapify", "html_url": "https://rseng.github.io/software/repository/github/aaryapatil/tapify", "api_url": "https://rseng.github.io/software/api/repos/github/aaryapatil/tapify"}, {"uid": "github/vcftools/index.html", "html_url": "https://rseng.github.io/software/repository/github/vcftools/index.html", "api_url": "https://rseng.github.io/software/api/repos/github/vcftools/index.html"}, {"uid": "github/Pometry/Raphtory", "html_url": "https://rseng.github.io/software/repository/github/Pometry/Raphtory", "api_url": "https://rseng.github.io/software/api/repos/github/Pometry/Raphtory"}, {"uid": "github/18parkky/NanoMnT", "html_url": "https://rseng.github.io/software/repository/github/18parkky/NanoMnT", "api_url": "https://rseng.github.io/software/api/repos/github/18parkky/NanoMnT"}, {"uid": "github/SHF-NAILResearchGroup/HINA", "html_url": "https://rseng.github.io/software/repository/github/SHF-NAILResearchGroup/HINA", "api_url": "https://rseng.github.io/software/api/repos/github/SHF-NAILResearchGroup/HINA"}, {"uid": "github/pepkit/geofetch", "html_url": "https://rseng.github.io/software/repository/github/pepkit/geofetch", "api_url": "https://rseng.github.io/software/api/repos/github/pepkit/geofetch"}, {"uid": "github/tariqdaouda/CAMAP", "html_url": "https://rseng.github.io/software/repository/github/tariqdaouda/CAMAP", "api_url": "https://rseng.github.io/software/api/repos/github/tariqdaouda/CAMAP"}, {"uid": "github/sagepublishing/rejected_article_tracker_pkg", "html_url": "https://rseng.github.io/software/repository/github/sagepublishing/rejected_article_tracker_pkg", "api_url": "https://rseng.github.io/software/api/repos/github/sagepublishing/rejected_article_tracker_pkg"}, {"uid": "github/OBrink/RanDepict", "html_url": "https://rseng.github.io/software/repository/github/OBrink/RanDepict", "api_url": "https://rseng.github.io/software/api/repos/github/OBrink/RanDepict"}, {"uid": "github/YenWenWang/HapDipKinship", "html_url": "https://rseng.github.io/software/repository/github/YenWenWang/HapDipKinship", "api_url": "https://rseng.github.io/software/api/repos/github/YenWenWang/HapDipKinship"}, {"uid": "github/JoelForamitti/agentpy", "html_url": "https://rseng.github.io/software/repository/github/JoelForamitti/agentpy", "api_url": "https://rseng.github.io/software/api/repos/github/JoelForamitti/agentpy"}, {"uid": "github/astrostat/BASCS", "html_url": "https://rseng.github.io/software/repository/github/astrostat/BASCS", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/BASCS"}, {"uid": "github/astrostat/TD-CARMA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/TD-CARMA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/TD-CARMA"}, {"uid": "github/astrostat/Automark", "html_url": "https://rseng.github.io/software/repository/github/astrostat/Automark", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/Automark"}, {"uid": "github/astrostat/LIRA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/LIRA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/LIRA"}, {"uid": "github/nicolet5/DiffCapAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/nicolet5/DiffCapAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/nicolet5/DiffCapAnalyzer"}, {"uid": "github/LINNAE-project/SFB-Annotator", "html_url": "https://rseng.github.io/software/repository/github/LINNAE-project/SFB-Annotator", "api_url": "https://rseng.github.io/software/api/repos/github/LINNAE-project/SFB-Annotator"}, {"uid": "github/marccanby/linguiphyr", "html_url": "https://rseng.github.io/software/repository/github/marccanby/linguiphyr", "api_url": "https://rseng.github.io/software/api/repos/github/marccanby/linguiphyr"}, {"uid": "github/ICRAR/shark", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/shark"}, {"uid": "github/ICRAR/libprofit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/libprofit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/libprofit"}, {"uid": "github/ICRAR/ProFit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/ProFit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/ProFit"}, {"uid": "github/hpparvi/opents", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/opents", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/opents"}, {"uid": "github/hpparvi/PyTransit", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/PyTransit", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/PyTransit"}, {"uid": "github/hpparvi/MuSCAT2_transit_pipeline", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/MuSCAT2_transit_pipeline"}, {"uid": "github/hpparvi/ldtk", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/ldtk", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/ldtk"}, {"uid": "github/hpparvi/spright", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/spright", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/spright"}, {"uid": "github/radis/radis", "html_url": "https://rseng.github.io/software/repository/github/radis/radis", "api_url": "https://rseng.github.io/software/api/repos/github/radis/radis"}, {"uid": "github/lcpp-org/RustBCA", "html_url": "https://rseng.github.io/software/repository/github/lcpp-org/RustBCA", "api_url": "https://rseng.github.io/software/api/repos/github/lcpp-org/RustBCA"}, {"uid": "github/ppmim/PAPI4K", "html_url": "https://rseng.github.io/software/repository/github/ppmim/PAPI4K", "api_url": "https://rseng.github.io/software/api/repos/github/ppmim/PAPI4K"}, {"uid": "github/SouthGreenPlatform/PyRice", "html_url": "https://rseng.github.io/software/repository/github/SouthGreenPlatform/PyRice", "api_url": "https://rseng.github.io/software/api/repos/github/SouthGreenPlatform/PyRice"}, {"uid": "github/SNEWS2/snewpy", "html_url": "https://rseng.github.io/software/repository/github/SNEWS2/snewpy", "api_url": "https://rseng.github.io/software/api/repos/github/SNEWS2/snewpy"}, {"uid": "github/singularityhub/sregistry", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/sregistry", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/sregistry"}, {"uid": "github/singularityhub/singularity-hpc", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-hpc", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-hpc"}, {"uid": "github/singularityhub/singularity-compose", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-compose", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-compose"}, {"uid": "github/binzhulab/SUITOR", "html_url": "https://rseng.github.io/software/repository/github/binzhulab/SUITOR", "api_url": "https://rseng.github.io/software/api/repos/github/binzhulab/SUITOR"}, {"uid": "github/adammoss/supernovae", "html_url": "https://rseng.github.io/software/repository/github/adammoss/supernovae", "api_url": "https://rseng.github.io/software/api/repos/github/adammoss/supernovae"}, {"uid": "github/IFCA-Advanced-Computing/FAIR_eva", "html_url": "https://rseng.github.io/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", "api_url": "https://rseng.github.io/software/api/repos/github/IFCA-Advanced-Computing/FAIR_eva"}, {"uid": "github/sunpy/sunpy", "html_url": "https://rseng.github.io/software/repository/github/sunpy/sunpy", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/sunpy"}, {"uid": "github/sunpy/ndcube", "html_url": "https://rseng.github.io/software/repository/github/sunpy/ndcube", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/ndcube"}, {"uid": "github/smirarab/sepp", "html_url": "https://rseng.github.io/software/repository/github/smirarab/sepp", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/sepp"}, {"uid": "github/smirarab/pasta", "html_url": "https://rseng.github.io/software/repository/github/smirarab/pasta", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/pasta"}, {"uid": "github/turbo-sim/TurboFlow", "html_url": "https://rseng.github.io/software/repository/github/turbo-sim/TurboFlow", "api_url": "https://rseng.github.io/software/api/repos/github/turbo-sim/TurboFlow"}, {"uid": "github/ahmedmoustafa/JAligner", "html_url": "https://rseng.github.io/software/repository/github/ahmedmoustafa/JAligner", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmoustafa/JAligner"}, {"uid": "github/takafumi291/ESSENCE", "html_url": "https://rseng.github.io/software/repository/github/takafumi291/ESSENCE", "api_url": "https://rseng.github.io/software/api/repos/github/takafumi291/ESSENCE"}, {"uid": "github/pierfied/karmma", "html_url": "https://rseng.github.io/software/repository/github/pierfied/karmma", "api_url": "https://rseng.github.io/software/api/repos/github/pierfied/karmma"}, {"uid": "github/ester-project/ester", "html_url": "https://rseng.github.io/software/repository/github/ester-project/ester", "api_url": "https://rseng.github.io/software/api/repos/github/ester-project/ester"}, {"uid": "github/simd-everywhere/simde", "html_url": "https://rseng.github.io/software/repository/github/simd-everywhere/simde", "api_url": "https://rseng.github.io/software/api/repos/github/simd-everywhere/simde"}, {"uid": "github/weizhouUMICH/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/weizhouUMICH/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/weizhouUMICH/SAIGE"}, {"uid": "github/ChrisBoettner/skaro", "html_url": "https://rseng.github.io/software/repository/github/ChrisBoettner/skaro", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBoettner/skaro"}, {"uid": "github/gnudatalanguage/gdl", "html_url": "https://rseng.github.io/software/repository/github/gnudatalanguage/gdl", "api_url": "https://rseng.github.io/software/api/repos/github/gnudatalanguage/gdl"}, {"uid": "github/dgobbi/vtk-dicom", "html_url": "https://rseng.github.io/software/repository/github/dgobbi/vtk-dicom", "api_url": "https://rseng.github.io/software/api/repos/github/dgobbi/vtk-dicom"}, {"uid": "github/rajeshmondal18/ReionYuga", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/ReionYuga", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/ReionYuga"}, {"uid": "github/rajeshmondal18/MAPS", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/MAPS"}, {"uid": "github/rajeshmondal18/N-body", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/N-body", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/N-body"}, {"uid": "github/rajeshmondal18/DviSukta", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/DviSukta", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/DviSukta"}, {"uid": "github/rajeshmondal18/FoF-Halo-finder", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/FoF-Halo-finder", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/FoF-Halo-finder"}, {"uid": "github/bvalot/pyMLST", "html_url": "https://rseng.github.io/software/repository/github/bvalot/pyMLST", "api_url": "https://rseng.github.io/software/api/repos/github/bvalot/pyMLST"}, {"uid": "github/SciML/DataInterpolations.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/DataInterpolations.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/DataInterpolations.jl"}, {"uid": "github/SciML/GlobalSensitivity.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/GlobalSensitivity.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/GlobalSensitivity.jl"}, {"uid": "github/ci-for-research/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-research/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-research/self-hosted-runners"}, {"uid": "github/OpenMS/OpenMS", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/OpenMS", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/OpenMS"}, {"uid": "github/OpenMS/pyopenms-extra", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/pyopenms-extra", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/pyopenms-extra"}, {"uid": "github/AMReX-Combustion/PeleLMeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Combustion/PeleLMeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Combustion/PeleLMeX"}, {"uid": "github/freebayes/freebayes", "html_url": "https://rseng.github.io/software/repository/github/freebayes/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/freebayes/freebayes"}, {"uid": "github/MichielsenM/FOAM", "html_url": "https://rseng.github.io/software/repository/github/MichielsenM/FOAM", "api_url": "https://rseng.github.io/software/api/repos/github/MichielsenM/FOAM"}, {"uid": "github/babelomics/impuSARS", "html_url": "https://rseng.github.io/software/repository/github/babelomics/impuSARS", "api_url": "https://rseng.github.io/software/api/repos/github/babelomics/impuSARS"}, {"uid": "github/minzastro/unidam", "html_url": "https://rseng.github.io/software/repository/github/minzastro/unidam", "api_url": "https://rseng.github.io/software/api/repos/github/minzastro/unidam"}, {"uid": "github/lnferris/ocean_data_tools", "html_url": "https://rseng.github.io/software/repository/github/lnferris/ocean_data_tools", "api_url": "https://rseng.github.io/software/api/repos/github/lnferris/ocean_data_tools"}, {"uid": "github/markheckmann/OpenRepGrid.ic", "html_url": "https://rseng.github.io/software/repository/github/markheckmann/OpenRepGrid.ic", "api_url": "https://rseng.github.io/software/api/repos/github/markheckmann/OpenRepGrid.ic"}, {"uid": "github/francescodc87/ipaPy2", "html_url": "https://rseng.github.io/software/repository/github/francescodc87/ipaPy2", "api_url": "https://rseng.github.io/software/api/repos/github/francescodc87/ipaPy2"}, {"uid": "github/ec363/fpcountr", "html_url": "https://rseng.github.io/software/repository/github/ec363/fpcountr", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/fpcountr"}, {"uid": "github/ec363/parsleyapp", "html_url": "https://rseng.github.io/software/repository/github/ec363/parsleyapp", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/parsleyapp"}, {"uid": "github/NickSwainston/pulsar_spectra", "html_url": "https://rseng.github.io/software/repository/github/NickSwainston/pulsar_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/NickSwainston/pulsar_spectra"}, {"uid": "github/colour-science/colour", "html_url": "https://rseng.github.io/software/repository/github/colour-science/colour", "api_url": "https://rseng.github.io/software/api/repos/github/colour-science/colour"}, {"uid": "github/esquivas/guacho", "html_url": "https://rseng.github.io/software/repository/github/esquivas/guacho", "api_url": "https://rseng.github.io/software/api/repos/github/esquivas/guacho"}, {"uid": "github/jkimlab/msPIPE", "html_url": "https://rseng.github.io/software/repository/github/jkimlab/msPIPE", "api_url": "https://rseng.github.io/software/api/repos/github/jkimlab/msPIPE"}, {"uid": "github/alexrhowe/APOLLO", "html_url": "https://rseng.github.io/software/repository/github/alexrhowe/APOLLO", "api_url": "https://rseng.github.io/software/api/repos/github/alexrhowe/APOLLO"}, {"uid": "github/exoplanet-dev/celerite2", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/celerite2", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/celerite2"}, {"uid": "github/exoplanet-dev/jaxoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/jaxoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/jaxoplanet"}, {"uid": "github/exoplanet-dev/exoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/exoplanet"}, {"uid": "github/jpcoles/mosaic", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/mosaic"}, {"uid": "github/jpcoles/glass", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/glass", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/glass"}, {"uid": "github/davidharvey1986/pyRRG", "html_url": "https://rseng.github.io/software/repository/github/davidharvey1986/pyRRG", "api_url": "https://rseng.github.io/software/api/repos/github/davidharvey1986/pyRRG"}, {"uid": "github/moead-framework/framework", "html_url": "https://rseng.github.io/software/repository/github/moead-framework/framework", "api_url": "https://rseng.github.io/software/api/repos/github/moead-framework/framework"}, {"uid": "github/KennethEnevoldsen/augmenty", "html_url": "https://rseng.github.io/software/repository/github/KennethEnevoldsen/augmenty", "api_url": "https://rseng.github.io/software/api/repos/github/KennethEnevoldsen/augmenty"}, {"uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", "html_url": "https://rseng.github.io/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Rohit-Kundu/ET-NET_Covid-Detection"}, {"uid": "github/cylammarco/WDPhotTools", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/WDPhotTools", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/WDPhotTools"}, {"uid": "github/cylammarco/ASPIRED", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/ASPIRED", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/ASPIRED"}, {"uid": "github/nlesc-ave/ave-rest-service", "html_url": "https://rseng.github.io/software/repository/github/nlesc-ave/ave-rest-service", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-ave/ave-rest-service"}, {"uid": "github/leirufeng/iEnhancer-DCSV", "html_url": "https://rseng.github.io/software/repository/github/leirufeng/iEnhancer-DCSV", "api_url": "https://rseng.github.io/software/api/repos/github/leirufeng/iEnhancer-DCSV"}, {"uid": "github/SuLab/Wikidata-phenomizer", "html_url": "https://rseng.github.io/software/repository/github/SuLab/Wikidata-phenomizer", "api_url": "https://rseng.github.io/software/api/repos/github/SuLab/Wikidata-phenomizer"}, {"uid": "github/htjb/maxsmooth", "html_url": "https://rseng.github.io/software/repository/github/htjb/maxsmooth", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/maxsmooth"}, {"uid": "github/htjb/margarine", "html_url": "https://rseng.github.io/software/repository/github/htjb/margarine", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/margarine"}, {"uid": "github/htjb/globalemu", "html_url": "https://rseng.github.io/software/repository/github/htjb/globalemu", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/globalemu"}, {"uid": "github/OliverFHD/GPUniverse", "html_url": "https://rseng.github.io/software/repository/github/OliverFHD/GPUniverse", "api_url": "https://rseng.github.io/software/api/repos/github/OliverFHD/GPUniverse"}, {"uid": "github/HIPS/autograd", "html_url": "https://rseng.github.io/software/repository/github/HIPS/autograd", "api_url": "https://rseng.github.io/software/api/repos/github/HIPS/autograd"}, {"uid": "github/yjx1217/RecombineX", "html_url": "https://rseng.github.io/software/repository/github/yjx1217/RecombineX", "api_url": "https://rseng.github.io/software/api/repos/github/yjx1217/RecombineX"}, {"uid": "github/junkoda/sidm-nbody", "html_url": "https://rseng.github.io/software/repository/github/junkoda/sidm-nbody", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/sidm-nbody"}, {"uid": "github/junkoda/cola_halo", "html_url": "https://rseng.github.io/software/repository/github/junkoda/cola_halo", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/cola_halo"}, {"uid": "github/pyomeca/biosiglive", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biosiglive", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biosiglive"}, {"uid": "github/pyomeca/biorbd", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biorbd", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biorbd"}, {"uid": "github/pyomeca/ezc3d", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/ezc3d", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/ezc3d"}, {"uid": "github/occupationMeasurement/occupationMeasurement", "html_url": "https://rseng.github.io/software/repository/github/occupationMeasurement/occupationMeasurement", "api_url": "https://rseng.github.io/software/api/repos/github/occupationMeasurement/occupationMeasurement"}, {"uid": "github/chombo-discharge/chombo-discharge", "html_url": "https://rseng.github.io/software/repository/github/chombo-discharge/chombo-discharge", "api_url": "https://rseng.github.io/software/api/repos/github/chombo-discharge/chombo-discharge"}, {"uid": "github/dsoave/JLS", "html_url": "https://rseng.github.io/software/repository/github/dsoave/JLS", "api_url": "https://rseng.github.io/software/api/repos/github/dsoave/JLS"}, {"uid": "github/DochtermannLab/BehavioralHeritability", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/BehavioralHeritability", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/BehavioralHeritability"}, {"uid": "github/DochtermannLab/G-PopComparison", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/G-PopComparison", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/G-PopComparison"}, {"uid": "github/HenrykHaniewicz/PSRVoid", "html_url": "https://rseng.github.io/software/repository/github/HenrykHaniewicz/PSRVoid", "api_url": "https://rseng.github.io/software/api/repos/github/HenrykHaniewicz/PSRVoid"}, {"uid": "github/Rformassspectrometry/Spectra", "html_url": "https://rseng.github.io/software/repository/github/Rformassspectrometry/Spectra", "api_url": "https://rseng.github.io/software/api/repos/github/Rformassspectrometry/Spectra"}, {"uid": "github/NVlabs/scene_synthesizer", "html_url": "https://rseng.github.io/software/repository/github/NVlabs/scene_synthesizer", "api_url": "https://rseng.github.io/software/api/repos/github/NVlabs/scene_synthesizer"}, {"uid": "github/petigura/terra", "html_url": "https://rseng.github.io/software/repository/github/petigura/terra", "api_url": "https://rseng.github.io/software/api/repos/github/petigura/terra"}, {"uid": "github/Rostlab/ConSurf", "html_url": "https://rseng.github.io/software/repository/github/Rostlab/ConSurf", "api_url": "https://rseng.github.io/software/api/repos/github/Rostlab/ConSurf"}, {"uid": "github/bzrudski/vectorose", "html_url": "https://rseng.github.io/software/repository/github/bzrudski/vectorose", "api_url": "https://rseng.github.io/software/api/repos/github/bzrudski/vectorose"}, {"uid": "github/mroosmalen/nanosv", "html_url": "https://rseng.github.io/software/repository/github/mroosmalen/nanosv", "api_url": "https://rseng.github.io/software/api/repos/github/mroosmalen/nanosv"}, {"uid": "github/kimpenn/VERSE", "html_url": "https://rseng.github.io/software/repository/github/kimpenn/VERSE", "api_url": "https://rseng.github.io/software/api/repos/github/kimpenn/VERSE"}, {"uid": "github/QITI/pySLM2", "html_url": "https://rseng.github.io/software/repository/github/QITI/pySLM2", "api_url": "https://rseng.github.io/software/api/repos/github/QITI/pySLM2"}, {"uid": "github/MarkusPic/intensity_duration_frequency_analysis", "html_url": "https://rseng.github.io/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/MarkusPic/intensity_duration_frequency_analysis"}, {"uid": "github/quantum-exeter/SpiDy.jl", "html_url": "https://rseng.github.io/software/repository/github/quantum-exeter/SpiDy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/quantum-exeter/SpiDy.jl"}, {"uid": "github/GeoffDuniam/FITS-Code-Examples", "html_url": "https://rseng.github.io/software/repository/github/GeoffDuniam/FITS-Code-Examples", "api_url": "https://rseng.github.io/software/api/repos/github/GeoffDuniam/FITS-Code-Examples"}, {"uid": "github/multiwavelength/gleam", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/gleam", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/gleam"}, {"uid": "github/multiwavelength/redshifts", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/redshifts", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/redshifts"}, {"uid": "github/meenakshi-kushwaha/mmaqshiny", "html_url": "https://rseng.github.io/software/repository/github/meenakshi-kushwaha/mmaqshiny", "api_url": "https://rseng.github.io/software/api/repos/github/meenakshi-kushwaha/mmaqshiny"}, {"uid": "github/atmos-cloud-sim-uj/PyMPDATA", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PyMPDATA"}, {"uid": "github/atmos-cloud-sim-uj/PySDM", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PySDM", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PySDM"}, {"uid": "github/artefactory/choice-learn", "html_url": "https://rseng.github.io/software/repository/github/artefactory/choice-learn", "api_url": "https://rseng.github.io/software/api/repos/github/artefactory/choice-learn"}, {"uid": "github/RJArthern/WAVI.jl", "html_url": "https://rseng.github.io/software/repository/github/RJArthern/WAVI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RJArthern/WAVI.jl"}, {"uid": "github/SietzeN/glottospace", "html_url": "https://rseng.github.io/software/repository/github/SietzeN/glottospace", "api_url": "https://rseng.github.io/software/api/repos/github/SietzeN/glottospace"}, {"uid": "github/levitsky/pyteomics", "html_url": "https://rseng.github.io/software/repository/github/levitsky/pyteomics", "api_url": "https://rseng.github.io/software/api/repos/github/levitsky/pyteomics"}, {"uid": "github/astrockragh/Mangrove", "html_url": "https://rseng.github.io/software/repository/github/astrockragh/Mangrove", "api_url": "https://rseng.github.io/software/api/repos/github/astrockragh/Mangrove"}, {"uid": "github/henrikju/resolve", "html_url": "https://rseng.github.io/software/repository/github/henrikju/resolve", "api_url": "https://rseng.github.io/software/api/repos/github/henrikju/resolve"}, {"uid": "github/mkargo/pipeline", "html_url": "https://rseng.github.io/software/repository/github/mkargo/pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mkargo/pipeline"}, {"uid": "github/funkyheatmap/funkyheatmap", "html_url": "https://rseng.github.io/software/repository/github/funkyheatmap/funkyheatmap", "api_url": "https://rseng.github.io/software/api/repos/github/funkyheatmap/funkyheatmap"}, {"uid": "github/klevis-a/kinematics-vis", "html_url": "https://rseng.github.io/software/repository/github/klevis-a/kinematics-vis", "api_url": "https://rseng.github.io/software/api/repos/github/klevis-a/kinematics-vis"}, {"uid": "github/fabiopardo/qmap", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/qmap", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/qmap"}, {"uid": "github/fabiopardo/tonic", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/tonic", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/tonic"}, {"uid": "github/djbard/ccogs", "html_url": "https://rseng.github.io/software/repository/github/djbard/ccogs", "api_url": "https://rseng.github.io/software/api/repos/github/djbard/ccogs"}, {"uid": "github/danhey/maelstrom", "html_url": "https://rseng.github.io/software/repository/github/danhey/maelstrom", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/maelstrom"}, {"uid": "github/danhey/echelle", "html_url": "https://rseng.github.io/software/repository/github/danhey/echelle", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/echelle"}, {"uid": "github/michalychforever/CLASS-PT", "html_url": "https://rseng.github.io/software/repository/github/michalychforever/CLASS-PT", "api_url": "https://rseng.github.io/software/api/repos/github/michalychforever/CLASS-PT"}, {"uid": "github/LoganAMorrison/Hazma", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/Hazma", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/Hazma"}, {"uid": "github/LoganAMorrison/blackthorn", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/blackthorn", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/blackthorn"}, {"uid": "github/online-behaviour/find-journalists", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/find-journalists", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/find-journalists"}, {"uid": "github/online-behaviour/machine-learning", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/machine-learning", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/machine-learning"}, {"uid": "github/yymao/abundancematching", "html_url": "https://rseng.github.io/software/repository/github/yymao/abundancematching", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/abundancematching"}, {"uid": "github/yymao/adstex", "html_url": "https://rseng.github.io/software/repository/github/yymao/adstex", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/adstex"}, {"uid": "github/bauer-alex/fuzzyclara", "html_url": "https://rseng.github.io/software/repository/github/bauer-alex/fuzzyclara", "api_url": "https://rseng.github.io/software/api/repos/github/bauer-alex/fuzzyclara"}, {"uid": "github/napakalas/casbert", "html_url": "https://rseng.github.io/software/repository/github/napakalas/casbert", "api_url": "https://rseng.github.io/software/api/repos/github/napakalas/casbert"}, {"uid": "github/eaobservatory/jcmt_coadd", "html_url": "https://rseng.github.io/software/repository/github/eaobservatory/jcmt_coadd", "api_url": "https://rseng.github.io/software/api/repos/github/eaobservatory/jcmt_coadd"}, {"uid": "github/bcgov/bcdata", "html_url": "https://rseng.github.io/software/repository/github/bcgov/bcdata", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/bcdata"}, {"uid": "github/bcgov/shinyssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/shinyssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/shinyssdtools"}, {"uid": "github/bcgov/ssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/ssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/ssdtools"}, {"uid": "github/danielacarrasco/GLACiAR", "html_url": "https://rseng.github.io/software/repository/github/danielacarrasco/GLACiAR", "api_url": "https://rseng.github.io/software/api/repos/github/danielacarrasco/GLACiAR"}, {"uid": "github/Autostronomy/AstroPhot", "html_url": "https://rseng.github.io/software/repository/github/Autostronomy/AstroPhot", "api_url": "https://rseng.github.io/software/api/repos/github/Autostronomy/AstroPhot"}, {"uid": "github/drwaseemsheikh/audiometry", "html_url": "https://rseng.github.io/software/repository/github/drwaseemsheikh/audiometry", "api_url": "https://rseng.github.io/software/api/repos/github/drwaseemsheikh/audiometry"}, {"uid": "github/collinlewin/STELA-Toolkit", "html_url": "https://rseng.github.io/software/repository/github/collinlewin/STELA-Toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/collinlewin/STELA-Toolkit"}, {"uid": "github/csiro-risk-assessment/mozzie", "html_url": "https://rseng.github.io/software/repository/github/csiro-risk-assessment/mozzie", "api_url": "https://rseng.github.io/software/api/repos/github/csiro-risk-assessment/mozzie"}, {"uid": "github/PennyLaneAI/catalyst", "html_url": "https://rseng.github.io/software/repository/github/PennyLaneAI/catalyst", "api_url": "https://rseng.github.io/software/api/repos/github/PennyLaneAI/catalyst"}, {"uid": "github/FrederickHuangLin/ANCOMBC", "html_url": "https://rseng.github.io/software/repository/github/FrederickHuangLin/ANCOMBC", "api_url": "https://rseng.github.io/software/api/repos/github/FrederickHuangLin/ANCOMBC"}, {"uid": "github/antonpannekoek/sunbather", "html_url": "https://rseng.github.io/software/repository/github/antonpannekoek/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/antonpannekoek/sunbather"}, {"uid": "github/jbuisine/macop", "html_url": "https://rseng.github.io/software/repository/github/jbuisine/macop", "api_url": "https://rseng.github.io/software/api/repos/github/jbuisine/macop"}, {"uid": "github/alex-b-davis/gubas", "html_url": "https://rseng.github.io/software/repository/github/alex-b-davis/gubas", "api_url": "https://rseng.github.io/software/api/repos/github/alex-b-davis/gubas"}, {"uid": "github/rgcgithub/regenie", "html_url": "https://rseng.github.io/software/repository/github/rgcgithub/regenie", "api_url": "https://rseng.github.io/software/api/repos/github/rgcgithub/regenie"}, {"uid": "github/castro-gzlz/TESS-cont", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/TESS-cont", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/TESS-cont"}, {"uid": "github/castro-gzlz/mr-plotter", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/mr-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/mr-plotter"}, {"uid": "github/JungleComputing/rocket", "html_url": "https://rseng.github.io/software/repository/github/JungleComputing/rocket", "api_url": "https://rseng.github.io/software/api/repos/github/JungleComputing/rocket"}, {"uid": "github/UTEL-UIUC/gtfs_segments", "html_url": "https://rseng.github.io/software/repository/github/UTEL-UIUC/gtfs_segments", "api_url": "https://rseng.github.io/software/api/repos/github/UTEL-UIUC/gtfs_segments"}, {"uid": "github/SoSongzhi/PVGA", "html_url": "https://rseng.github.io/software/repository/github/SoSongzhi/PVGA", "api_url": "https://rseng.github.io/software/api/repos/github/SoSongzhi/PVGA"}, {"uid": "github/ebachelet/pyLIMA", "html_url": "https://rseng.github.io/software/repository/github/ebachelet/pyLIMA", "api_url": "https://rseng.github.io/software/api/repos/github/ebachelet/pyLIMA"}, {"uid": "github/OSS-Lab/ChemChaste", "html_url": "https://rseng.github.io/software/repository/github/OSS-Lab/ChemChaste", "api_url": "https://rseng.github.io/software/api/repos/github/OSS-Lab/ChemChaste"}, {"uid": "github/fredstro/hilbertmodgroup", "html_url": "https://rseng.github.io/software/repository/github/fredstro/hilbertmodgroup", "api_url": "https://rseng.github.io/software/api/repos/github/fredstro/hilbertmodgroup"}, {"uid": "github/mjacob1002/Eir", "html_url": "https://rseng.github.io/software/repository/github/mjacob1002/Eir", "api_url": "https://rseng.github.io/software/api/repos/github/mjacob1002/Eir"}, {"uid": "github/grburgess/ronswanson", "html_url": "https://rseng.github.io/software/repository/github/grburgess/ronswanson", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/ronswanson"}, {"uid": "github/grburgess/pynchrotron", "html_url": "https://rseng.github.io/software/repository/github/grburgess/pynchrotron", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/pynchrotron"}, {"uid": "github/grburgess/nazgul", "html_url": "https://rseng.github.io/software/repository/github/grburgess/nazgul", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/nazgul"}, {"uid": "github/grburgess/polarpy", "html_url": "https://rseng.github.io/software/repository/github/grburgess/polarpy", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/polarpy"}, {"uid": "github/grburgess/popsynth", "html_url": "https://rseng.github.io/software/repository/github/grburgess/popsynth", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/popsynth"}, {"uid": "github/me-manu/gammaALPs", "html_url": "https://rseng.github.io/software/repository/github/me-manu/gammaALPs", "api_url": "https://rseng.github.io/software/api/repos/github/me-manu/gammaALPs"}, {"uid": "github/UgoLomoio/gtex_visualizer", "html_url": "https://rseng.github.io/software/repository/github/UgoLomoio/gtex_visualizer", "api_url": "https://rseng.github.io/software/api/repos/github/UgoLomoio/gtex_visualizer"}, {"uid": "github/ryneches/SuchTree", "html_url": "https://rseng.github.io/software/repository/github/ryneches/SuchTree", "api_url": "https://rseng.github.io/software/api/repos/github/ryneches/SuchTree"}, {"uid": "github/xfcui/onn4arg", "html_url": "https://rseng.github.io/software/repository/github/xfcui/onn4arg", "api_url": "https://rseng.github.io/software/api/repos/github/xfcui/onn4arg"}, {"uid": "github/lauralwatkins/cjam", "html_url": "https://rseng.github.io/software/repository/github/lauralwatkins/cjam", "api_url": "https://rseng.github.io/software/api/repos/github/lauralwatkins/cjam"}, {"uid": "github/gevaertlab/DUNE", "html_url": "https://rseng.github.io/software/repository/github/gevaertlab/DUNE", "api_url": "https://rseng.github.io/software/api/repos/github/gevaertlab/DUNE"}, {"uid": "github/moustakas/iSEDfit", "html_url": "https://rseng.github.io/software/repository/github/moustakas/iSEDfit", "api_url": "https://rseng.github.io/software/api/repos/github/moustakas/iSEDfit"}, {"uid": "github/ThomasMBury/ewstools", "html_url": "https://rseng.github.io/software/repository/github/ThomasMBury/ewstools", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasMBury/ewstools"}, {"uid": "github/manodeep/Corrfunc", "html_url": "https://rseng.github.io/software/repository/github/manodeep/Corrfunc", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/Corrfunc"}, {"uid": "github/manodeep/TesseRACt", "html_url": "https://rseng.github.io/software/repository/github/manodeep/TesseRACt", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/TesseRACt"}, {"uid": "github/haowenz/chromap", "html_url": "https://rseng.github.io/software/repository/github/haowenz/chromap", "api_url": "https://rseng.github.io/software/api/repos/github/haowenz/chromap"}, {"uid": "github/gwastro/pycbc", "html_url": "https://rseng.github.io/software/repository/github/gwastro/pycbc", "api_url": "https://rseng.github.io/software/api/repos/github/gwastro/pycbc"}, {"uid": "github/wmglab-duke/ascent", "html_url": "https://rseng.github.io/software/repository/github/wmglab-duke/ascent", "api_url": "https://rseng.github.io/software/api/repos/github/wmglab-duke/ascent"}, {"uid": "github/forrest-lab/scMatch", "html_url": "https://rseng.github.io/software/repository/github/forrest-lab/scMatch", "api_url": "https://rseng.github.io/software/api/repos/github/forrest-lab/scMatch"}, {"uid": "github/bmoster/emerge", "html_url": "https://rseng.github.io/software/repository/github/bmoster/emerge", "api_url": "https://rseng.github.io/software/api/repos/github/bmoster/emerge"}, {"uid": "github/Michalychforever/CLASS_LVDM", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/CLASS_LVDM", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/CLASS_LVDM"}, {"uid": "github/Michalychforever/AsPy", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/AsPy", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/AsPy"}, {"uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "html_url": "https://rseng.github.io/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "api_url": "https://rseng.github.io/software/api/repos/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset"}, {"uid": "github/gvilitechltd/LibSWIFFT", "html_url": "https://rseng.github.io/software/repository/github/gvilitechltd/LibSWIFFT", "api_url": "https://rseng.github.io/software/api/repos/github/gvilitechltd/LibSWIFFT"}, {"uid": "github/Ompha/CLUES", "html_url": "https://rseng.github.io/software/repository/github/Ompha/CLUES", "api_url": "https://rseng.github.io/software/api/repos/github/Ompha/CLUES"}, {"uid": "github/storyofthewolf/ExoRT", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoRT", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoRT"}, {"uid": "github/storyofthewolf/ExoCAM", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoCAM", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoCAM"}, {"uid": "github/VSPEC-collab/VSPEC", "html_url": "https://rseng.github.io/software/repository/github/VSPEC-collab/VSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/VSPEC-collab/VSPEC"}, {"uid": "github/Crick-CancerGenomics/ascat", "html_url": "https://rseng.github.io/software/repository/github/Crick-CancerGenomics/ascat", "api_url": "https://rseng.github.io/software/api/repos/github/Crick-CancerGenomics/ascat"}, {"uid": "github/justyncw/STAR_MELT", "html_url": "https://rseng.github.io/software/repository/github/justyncw/STAR_MELT", "api_url": "https://rseng.github.io/software/api/repos/github/justyncw/STAR_MELT"}, {"uid": "github/nnssa/gallumi_public", "html_url": "https://rseng.github.io/software/repository/github/nnssa/gallumi_public", "api_url": "https://rseng.github.io/software/api/repos/github/nnssa/gallumi_public"}, {"uid": "github/stinefm/relsad", "html_url": "https://rseng.github.io/software/repository/github/stinefm/relsad", "api_url": "https://rseng.github.io/software/api/repos/github/stinefm/relsad"}, {"uid": "github/autotwin/automesh", "html_url": "https://rseng.github.io/software/repository/github/autotwin/automesh", "api_url": "https://rseng.github.io/software/api/repos/github/autotwin/automesh"}, {"uid": "github/astronomical-data-processing/RAPP", "html_url": "https://rseng.github.io/software/repository/github/astronomical-data-processing/RAPP", "api_url": "https://rseng.github.io/software/api/repos/github/astronomical-data-processing/RAPP"}, {"uid": "github/davidaknowles/leafcutter", "html_url": "https://rseng.github.io/software/repository/github/davidaknowles/leafcutter", "api_url": "https://rseng.github.io/software/api/repos/github/davidaknowles/leafcutter"}, {"uid": "github/anwarbio/bioassays", "html_url": "https://rseng.github.io/software/repository/github/anwarbio/bioassays", "api_url": "https://rseng.github.io/software/api/repos/github/anwarbio/bioassays"}, {"uid": "github/IanevskiAleksandr/sc-type", "html_url": "https://rseng.github.io/software/repository/github/IanevskiAleksandr/sc-type", "api_url": "https://rseng.github.io/software/api/repos/github/IanevskiAleksandr/sc-type"}, {"uid": "github/coccoinomane/zelda", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/zelda", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/zelda"}, {"uid": "github/coccoinomane/song", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/song", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/song"}, {"uid": "github/iipharma/pharmamind-molminer", "html_url": "https://rseng.github.io/software/repository/github/iipharma/pharmamind-molminer", "api_url": "https://rseng.github.io/software/api/repos/github/iipharma/pharmamind-molminer"}, {"uid": "github/sys-bio/ratesb_python", "html_url": "https://rseng.github.io/software/repository/github/sys-bio/ratesb_python", "api_url": "https://rseng.github.io/software/api/repos/github/sys-bio/ratesb_python"}, {"uid": "github/kdeck/TTVFast", "html_url": "https://rseng.github.io/software/repository/github/kdeck/TTVFast", "api_url": "https://rseng.github.io/software/api/repos/github/kdeck/TTVFast"}, {"uid": "github/QuaCaTeam/quaca", "html_url": "https://rseng.github.io/software/repository/github/QuaCaTeam/quaca", "api_url": "https://rseng.github.io/software/api/repos/github/QuaCaTeam/quaca"}, {"uid": "github/Goobley/Radynversion", "html_url": "https://rseng.github.io/software/repository/github/Goobley/Radynversion", "api_url": "https://rseng.github.io/software/api/repos/github/Goobley/Radynversion"}, {"uid": "github/light-curve/light-curve-python", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve-python", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve-python"}, {"uid": "github/light-curve/light-curve", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve"}, {"uid": "github/marschall-lab/panacus", "html_url": "https://rseng.github.io/software/repository/github/marschall-lab/panacus", "api_url": "https://rseng.github.io/software/api/repos/github/marschall-lab/panacus"}, {"uid": "github/biosimulations/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/biosimulations/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/biosimulations/Biosimulations"}, {"uid": "github/ruanjue/wtdbg2", "html_url": "https://rseng.github.io/software/repository/github/ruanjue/wtdbg2", "api_url": "https://rseng.github.io/software/api/repos/github/ruanjue/wtdbg2"}, {"uid": "github/JanCBrammer/biopeaks", "html_url": "https://rseng.github.io/software/repository/github/JanCBrammer/biopeaks", "api_url": "https://rseng.github.io/software/api/repos/github/JanCBrammer/biopeaks"}, {"uid": "github/henrycousins/gspa", "html_url": "https://rseng.github.io/software/repository/github/henrycousins/gspa", "api_url": "https://rseng.github.io/software/api/repos/github/henrycousins/gspa"}, {"uid": "github/ChileanVirtualObservatory/indexing_utfsm", "html_url": "https://rseng.github.io/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", "api_url": "https://rseng.github.io/software/api/repos/github/ChileanVirtualObservatory/indexing_utfsm"}, {"uid": "github/fzagaria/COpops", "html_url": "https://rseng.github.io/software/repository/github/fzagaria/COpops", "api_url": "https://rseng.github.io/software/api/repos/github/fzagaria/COpops"}, {"uid": "github/CNIC-Proteomics/TurboPutative-web", "html_url": "https://rseng.github.io/software/repository/github/CNIC-Proteomics/TurboPutative-web", "api_url": "https://rseng.github.io/software/api/repos/github/CNIC-Proteomics/TurboPutative-web"}, {"uid": "github/mikegrudic/MakeCloud", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/MakeCloud", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/MakeCloud"}, {"uid": "github/mikegrudic/pytreegrav", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/pytreegrav", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/pytreegrav"}, {"uid": "github/moritzobenauer/ProjectRaccoon", "html_url": "https://rseng.github.io/software/repository/github/moritzobenauer/ProjectRaccoon", "api_url": "https://rseng.github.io/software/api/repos/github/moritzobenauer/ProjectRaccoon"}, {"uid": "github/EoRImaging/FHD", "html_url": "https://rseng.github.io/software/repository/github/EoRImaging/FHD", "api_url": "https://rseng.github.io/software/api/repos/github/EoRImaging/FHD"}, {"uid": "github/Julian/jsonschema", "html_url": "https://rseng.github.io/software/repository/github/Julian/jsonschema", "api_url": "https://rseng.github.io/software/api/repos/github/Julian/jsonschema"}, {"uid": "github/BioComputingUP/ring-pymol", "html_url": "https://rseng.github.io/software/repository/github/BioComputingUP/ring-pymol", "api_url": "https://rseng.github.io/software/api/repos/github/BioComputingUP/ring-pymol"}, {"uid": "github/CheerfulUser/starkiller", "html_url": "https://rseng.github.io/software/repository/github/CheerfulUser/starkiller", "api_url": "https://rseng.github.io/software/api/repos/github/CheerfulUser/starkiller"}, {"uid": "github/arielmission-space/ExoSim2-public", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/ExoSim2-public", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/ExoSim2-public"}, {"uid": "github/arielmission-space/PAOS", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/PAOS", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/PAOS"}, {"uid": "github/rformassspectrometry/SpectriPy", "html_url": "https://rseng.github.io/software/repository/github/rformassspectrometry/SpectriPy", "api_url": "https://rseng.github.io/software/api/repos/github/rformassspectrometry/SpectriPy"}, {"uid": "github/zhangyk8/sconce-scms", "html_url": "https://rseng.github.io/software/repository/github/zhangyk8/sconce-scms", "api_url": "https://rseng.github.io/software/api/repos/github/zhangyk8/sconce-scms"}, {"uid": "github/ypmen/PulsarX", "html_url": "https://rseng.github.io/software/repository/github/ypmen/PulsarX", "api_url": "https://rseng.github.io/software/api/repos/github/ypmen/PulsarX"}, {"uid": "github/ssadedin/bazam", "html_url": "https://rseng.github.io/software/repository/github/ssadedin/bazam", "api_url": "https://rseng.github.io/software/api/repos/github/ssadedin/bazam"}, {"uid": "github/JanLeppert/GasChromatographySimulator.jl", "html_url": "https://rseng.github.io/software/repository/github/JanLeppert/GasChromatographySimulator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JanLeppert/GasChromatographySimulator.jl"}, {"uid": "github/pyamg/pyamg", "html_url": "https://rseng.github.io/software/repository/github/pyamg/pyamg", "api_url": "https://rseng.github.io/software/api/repos/github/pyamg/pyamg"}, {"uid": "github/steineggerlab/foldmason", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldmason", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldmason"}, {"uid": "github/steineggerlab/foldseek", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldseek", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldseek"}, {"uid": "github/abs2k12/COCOA", "html_url": "https://rseng.github.io/software/repository/github/abs2k12/COCOA", "api_url": "https://rseng.github.io/software/api/repos/github/abs2k12/COCOA"}, {"uid": "github/LiyrAstroph/PyCALI", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PyCALI", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PyCALI"}, {"uid": "github/LiyrAstroph/RECON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/RECON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/RECON"}, {"uid": "github/LiyrAstroph/BRAINS", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/BRAINS", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/BRAINS"}, {"uid": "github/LiyrAstroph/PIXON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PIXON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PIXON"}, {"uid": "github/kitokamada/QUIDS", "html_url": "https://rseng.github.io/software/repository/github/kitokamada/QUIDS", "api_url": "https://rseng.github.io/software/api/repos/github/kitokamada/QUIDS"}, {"uid": "github/PyTorchLightning/metrics", "html_url": "https://rseng.github.io/software/repository/github/PyTorchLightning/metrics", "api_url": "https://rseng.github.io/software/api/repos/github/PyTorchLightning/metrics"}, {"uid": "github/jonaselgammal/GPry", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/GPry", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/GPry"}, {"uid": "github/jonaselgammal/SIGWAY", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/SIGWAY", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/SIGWAY"}, {"uid": "github/slimgroup/InvertibleNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/slimgroup/InvertibleNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/slimgroup/InvertibleNetworks.jl"}, {"uid": "github/Maison-de-la-Simulation/heraclespp", "html_url": "https://rseng.github.io/software/repository/github/Maison-de-la-Simulation/heraclespp", "api_url": "https://rseng.github.io/software/api/repos/github/Maison-de-la-Simulation/heraclespp"}, {"uid": "github/SpeedyWeather/SpeedyWeather.jl", "html_url": "https://rseng.github.io/software/repository/github/SpeedyWeather/SpeedyWeather.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SpeedyWeather/SpeedyWeather.jl"}, {"uid": "github/karllark/DIRTY_dustrt", "html_url": "https://rseng.github.io/software/repository/github/karllark/DIRTY_dustrt", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/DIRTY_dustrt"}, {"uid": "github/karllark/measure_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/measure_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/measure_extinction"}, {"uid": "github/karllark/dust_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/dust_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/dust_extinction"}, {"uid": "github/dentalfloss1/transients-simulations", "html_url": "https://rseng.github.io/software/repository/github/dentalfloss1/transients-simulations", "api_url": "https://rseng.github.io/software/api/repos/github/dentalfloss1/transients-simulations"}, {"uid": "github/mib-unitn/SoFT", "html_url": "https://rseng.github.io/software/repository/github/mib-unitn/SoFT", "api_url": "https://rseng.github.io/software/api/repos/github/mib-unitn/SoFT"}, {"uid": "github/ArenA-Crowds/Crowds", "html_url": "https://rseng.github.io/software/repository/github/ArenA-Crowds/Crowds", "api_url": "https://rseng.github.io/software/api/repos/github/ArenA-Crowds/Crowds"}, {"uid": "github/JinxinMonash/PhageGE", "html_url": "https://rseng.github.io/software/repository/github/JinxinMonash/PhageGE", "api_url": "https://rseng.github.io/software/api/repos/github/JinxinMonash/PhageGE"}, {"uid": "github/rochoa85/NTDHealth_Forms", "html_url": "https://rseng.github.io/software/repository/github/rochoa85/NTDHealth_Forms", "api_url": "https://rseng.github.io/software/api/repos/github/rochoa85/NTDHealth_Forms"}, {"uid": "github/CliMA/CalibrateEmulateSample.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/CalibrateEmulateSample.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/CalibrateEmulateSample.jl"}, {"uid": "github/CliMA/EnsembleKalmanProcesses.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/EnsembleKalmanProcesses.jl"}, {"uid": "github/lzx325/DeeReCT-APA-repo", "html_url": "https://rseng.github.io/software/repository/github/lzx325/DeeReCT-APA-repo", "api_url": "https://rseng.github.io/software/api/repos/github/lzx325/DeeReCT-APA-repo"}, {"uid": "github/snad-space/ztf-viewer", "html_url": "https://rseng.github.io/software/repository/github/snad-space/ztf-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/ztf-viewer"}, {"uid": "github/snad-space/coniferest", "html_url": "https://rseng.github.io/software/repository/github/snad-space/coniferest", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/coniferest"}, {"uid": "github/snad-space/zwad", "html_url": "https://rseng.github.io/software/repository/github/snad-space/zwad", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/zwad"}, {"uid": "github/Health-RI/img2catalog", "html_url": "https://rseng.github.io/software/repository/github/Health-RI/img2catalog", "api_url": "https://rseng.github.io/software/api/repos/github/Health-RI/img2catalog"}, {"uid": "github/INCEPTdk/adaptr", "html_url": "https://rseng.github.io/software/repository/github/INCEPTdk/adaptr", "api_url": "https://rseng.github.io/software/api/repos/github/INCEPTdk/adaptr"}, {"uid": "github/McPHAC/McPHAC", "html_url": "https://rseng.github.io/software/repository/github/McPHAC/McPHAC", "api_url": "https://rseng.github.io/software/api/repos/github/McPHAC/McPHAC"}, {"uid": "github/csinva/imodels", "html_url": "https://rseng.github.io/software/repository/github/csinva/imodels", "api_url": "https://rseng.github.io/software/api/repos/github/csinva/imodels"}, {"uid": "github/DataBiosphere/wdl-parsers", "html_url": "https://rseng.github.io/software/repository/github/DataBiosphere/wdl-parsers", "api_url": "https://rseng.github.io/software/api/repos/github/DataBiosphere/wdl-parsers"}, {"uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", "html_url": "https://rseng.github.io/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", "api_url": "https://rseng.github.io/software/api/repos/github/uaf-arctic-eco-modeling/dvm-dos-tem"}, {"uid": "github/magnuspalmblad/averageRegions", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/averageRegions", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/averageRegions"}, {"uid": "github/magnuspalmblad/shic", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/shic", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/shic"}, {"uid": "github/magnuspalmblad/navpa", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/navpa", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/navpa"}, {"uid": "github/magnuspalmblad/addFeatures", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/addFeatures", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/addFeatures"}, {"uid": "github/dawolfgang/MRrelation", "html_url": "https://rseng.github.io/software/repository/github/dawolfgang/MRrelation", "api_url": "https://rseng.github.io/software/api/repos/github/dawolfgang/MRrelation"}, {"uid": "github/klebgenomics/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/klebgenomics/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/klebgenomics/Kleborate"}, {"uid": "github/bruce-chappell/SunnyNet", "html_url": "https://rseng.github.io/software/repository/github/bruce-chappell/SunnyNet", "api_url": "https://rseng.github.io/software/api/repos/github/bruce-chappell/SunnyNet"}, {"uid": "github/kdmurray91/libqes", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqes", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqes"}, {"uid": "github/kdmurray91/libqcpp", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqcpp", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqcpp"}, {"uid": "github/kdmurray91/axe", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/axe", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/axe"}, {"uid": "github/williamjameshandley/fgivenx", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/fgivenx", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/fgivenx"}, {"uid": "github/williamjameshandley/anesthetic", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/anesthetic", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/anesthetic"}, {"uid": "github/PeterKamphuis/FAT", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/FAT", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/FAT"}, {"uid": "github/PeterKamphuis/pyFAT-astro", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/pyFAT-astro", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/pyFAT-astro"}, {"uid": "github/BrockWW/BubbleFindingAlgorithm", "html_url": "https://rseng.github.io/software/repository/github/BrockWW/BubbleFindingAlgorithm", "api_url": "https://rseng.github.io/software/api/repos/github/BrockWW/BubbleFindingAlgorithm"}, {"uid": "github/kotekan/kotekan", "html_url": "https://rseng.github.io/software/repository/github/kotekan/kotekan", "api_url": "https://rseng.github.io/software/api/repos/github/kotekan/kotekan"}, {"uid": "github/Dfam-consortium/RepeatModeler", "html_url": "https://rseng.github.io/software/repository/github/Dfam-consortium/RepeatModeler", "api_url": "https://rseng.github.io/software/api/repos/github/Dfam-consortium/RepeatModeler"}, {"uid": "github/jeffcsauer/arcos_arcospy_information", "html_url": "https://rseng.github.io/software/repository/github/jeffcsauer/arcos_arcospy_information", "api_url": "https://rseng.github.io/software/api/repos/github/jeffcsauer/arcos_arcospy_information"}, {"uid": "github/asgr/ProFuse", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFuse", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFuse"}, {"uid": "github/asgr/hyper.fit", "html_url": "https://rseng.github.io/software/repository/github/asgr/hyper.fit", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/hyper.fit"}, {"uid": "github/asgr/Rwcs", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rwcs", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rwcs"}, {"uid": "github/asgr/ProPane", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProPane", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProPane"}, {"uid": "github/asgr/ProSpect", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProSpect", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProSpect"}, {"uid": "github/asgr/celestial", "html_url": "https://rseng.github.io/software/repository/github/asgr/celestial", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/celestial"}, {"uid": "github/asgr/ProFound", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFound", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFound"}, {"uid": "github/asgr/NFWdist", "html_url": "https://rseng.github.io/software/repository/github/asgr/NFWdist", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/NFWdist"}, {"uid": "github/asgr/Rfits", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rfits", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rfits"}, {"uid": "github/jpahlers/LASR", "html_url": "https://rseng.github.io/software/repository/github/jpahlers/LASR", "api_url": "https://rseng.github.io/software/api/repos/github/jpahlers/LASR"}, {"uid": "github/openCARP-org/FACILE-RS", "html_url": "https://rseng.github.io/software/repository/github/openCARP-org/FACILE-RS", "api_url": "https://rseng.github.io/software/api/repos/github/openCARP-org/FACILE-RS"}, {"uid": "github/KolmogorovLab/Severus", "html_url": "https://rseng.github.io/software/repository/github/KolmogorovLab/Severus", "api_url": "https://rseng.github.io/software/api/repos/github/KolmogorovLab/Severus"}, {"uid": "github/pmeier/pystiche", "html_url": "https://rseng.github.io/software/repository/github/pmeier/pystiche", "api_url": "https://rseng.github.io/software/api/repos/github/pmeier/pystiche"}, {"uid": "github/torognes/swarm", "html_url": "https://rseng.github.io/software/repository/github/torognes/swarm", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/swarm"}, {"uid": "github/torognes/vsearch", "html_url": "https://rseng.github.io/software/repository/github/torognes/vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/vsearch"}, {"uid": "github/2decomp-fft/2decomp-fft", "html_url": "https://rseng.github.io/software/repository/github/2decomp-fft/2decomp-fft", "api_url": "https://rseng.github.io/software/api/repos/github/2decomp-fft/2decomp-fft"}, {"uid": "github/flintproject/Flint", "html_url": "https://rseng.github.io/software/repository/github/flintproject/Flint", "api_url": "https://rseng.github.io/software/api/repos/github/flintproject/Flint"}, {"uid": "github/benyhh/ml-telescope-pointing-correction", "html_url": "https://rseng.github.io/software/repository/github/benyhh/ml-telescope-pointing-correction", "api_url": "https://rseng.github.io/software/api/repos/github/benyhh/ml-telescope-pointing-correction"}, {"uid": "github/aobr/gsf", "html_url": "https://rseng.github.io/software/repository/github/aobr/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/aobr/gsf"}, {"uid": "github/BiomedSciAI/fuse-med-ml", "html_url": "https://rseng.github.io/software/repository/github/BiomedSciAI/fuse-med-ml", "api_url": "https://rseng.github.io/software/api/repos/github/BiomedSciAI/fuse-med-ml"}, {"uid": "github/mrline/CHIMERA", "html_url": "https://rseng.github.io/software/repository/github/mrline/CHIMERA", "api_url": "https://rseng.github.io/software/api/repos/github/mrline/CHIMERA"}, {"uid": "github/liamedeiros/ehtplot", "html_url": "https://rseng.github.io/software/repository/github/liamedeiros/ehtplot", "api_url": "https://rseng.github.io/software/api/repos/github/liamedeiros/ehtplot"}, {"uid": "github/nye17/javelin", "html_url": "https://rseng.github.io/software/repository/github/nye17/javelin", "api_url": "https://rseng.github.io/software/api/repos/github/nye17/javelin"}, {"uid": "github/gdefazio/kMetaShot", "html_url": "https://rseng.github.io/software/repository/github/gdefazio/kMetaShot", "api_url": "https://rseng.github.io/software/api/repos/github/gdefazio/kMetaShot"}, {"uid": "github/hera-team/librarian", "html_url": "https://rseng.github.io/software/repository/github/hera-team/librarian", "api_url": "https://rseng.github.io/software/api/repos/github/hera-team/librarian"}, {"uid": "github/chandra-marx/marxs", "html_url": "https://rseng.github.io/software/repository/github/chandra-marx/marxs", "api_url": "https://rseng.github.io/software/api/repos/github/chandra-marx/marxs"}, {"uid": "github/mlegr/EqualISER", "html_url": "https://rseng.github.io/software/repository/github/mlegr/EqualISER", "api_url": "https://rseng.github.io/software/api/repos/github/mlegr/EqualISER"}, {"uid": "github/BioSTEAMDevelopmentGroup/thermosteam", "html_url": "https://rseng.github.io/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", "api_url": "https://rseng.github.io/software/api/repos/github/BioSTEAMDevelopmentGroup/thermosteam"}, {"uid": "github/opengenomebrowser/opengenomebrowser", "html_url": "https://rseng.github.io/software/repository/github/opengenomebrowser/opengenomebrowser", "api_url": "https://rseng.github.io/software/api/repos/github/opengenomebrowser/opengenomebrowser"}, {"uid": "github/dputhier/pygtftk", "html_url": "https://rseng.github.io/software/repository/github/dputhier/pygtftk", "api_url": "https://rseng.github.io/software/api/repos/github/dputhier/pygtftk"}, {"uid": "github/FoxFortino/ABC-SN", "html_url": "https://rseng.github.io/software/repository/github/FoxFortino/ABC-SN", "api_url": "https://rseng.github.io/software/api/repos/github/FoxFortino/ABC-SN"}, {"uid": "github/ShixiangWang/sigminer", "html_url": "https://rseng.github.io/software/repository/github/ShixiangWang/sigminer", "api_url": "https://rseng.github.io/software/api/repos/github/ShixiangWang/sigminer"}, {"uid": "github/ogotoh/spaln", "html_url": "https://rseng.github.io/software/repository/github/ogotoh/spaln", "api_url": "https://rseng.github.io/software/api/repos/github/ogotoh/spaln"}, {"uid": "github/daler/gffutils", "html_url": "https://rseng.github.io/software/repository/github/daler/gffutils", "api_url": "https://rseng.github.io/software/api/repos/github/daler/gffutils"}, {"uid": "github/daler/pybedtools", "html_url": "https://rseng.github.io/software/repository/github/daler/pybedtools", "api_url": "https://rseng.github.io/software/api/repos/github/daler/pybedtools"}, {"uid": "github/EMSL-Computing/Pore2Chip", "html_url": "https://rseng.github.io/software/repository/github/EMSL-Computing/Pore2Chip", "api_url": "https://rseng.github.io/software/api/repos/github/EMSL-Computing/Pore2Chip"}, {"uid": "github/SSAGESproject/SSAGES", "html_url": "https://rseng.github.io/software/repository/github/SSAGESproject/SSAGES", "api_url": "https://rseng.github.io/software/api/repos/github/SSAGESproject/SSAGES"}, {"uid": "github/davidkipping/LDC3", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/LDC3", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/LDC3"}, {"uid": "github/davidkipping/MACULA", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MACULA", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MACULA"}, {"uid": "github/davidkipping/ECCSAMPLES", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/ECCSAMPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/ECCSAMPLES"}, {"uid": "github/davidkipping/inversebeta", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/inversebeta", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/inversebeta"}, {"uid": "github/davidkipping/flicker", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/flicker", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/flicker"}, {"uid": "github/davidkipping/MAH", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MAH", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MAH"}, {"uid": "github/rnikutta/rhocube", "html_url": "https://rseng.github.io/software/repository/github/rnikutta/rhocube", "api_url": "https://rseng.github.io/software/api/repos/github/rnikutta/rhocube"}, {"uid": "github/miRTop/mirtop", "html_url": "https://rseng.github.io/software/repository/github/miRTop/mirtop", "api_url": "https://rseng.github.io/software/api/repos/github/miRTop/mirtop"}, {"uid": "github/sambit-giri/BCemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCemu"}, {"uid": "github/sambit-giri/tools21cm", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/tools21cm", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/tools21cm"}, {"uid": "github/sambit-giri/BCMemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCMemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCMemu"}, {"uid": "github/sheryl-ai/MetaPred", "html_url": "https://rseng.github.io/software/repository/github/sheryl-ai/MetaPred", "api_url": "https://rseng.github.io/software/api/repos/github/sheryl-ai/MetaPred"}, {"uid": "github/YuRui8879/MRASleepNet", "html_url": "https://rseng.github.io/software/repository/github/YuRui8879/MRASleepNet", "api_url": "https://rseng.github.io/software/api/repos/github/YuRui8879/MRASleepNet"}, {"uid": "github/JGCRI/osiris", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/osiris", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/osiris"}, {"uid": "github/JGCRI/gaia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gaia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gaia"}, {"uid": "github/JGCRI/HELPS", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/HELPS", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/HELPS"}, {"uid": "github/JGCRI/rfasst", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rfasst", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rfasst"}, {"uid": "github/JGCRI/tethys", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/tethys", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/tethys"}, {"uid": "github/JGCRI/rmap", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rmap", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rmap"}, {"uid": "github/JGCRI/gcamfaostat", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gcamfaostat", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gcamfaostat"}, {"uid": "github/JGCRI/stitches", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/stitches", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/stitches"}, {"uid": "github/JGCRI/ambrosia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/ambrosia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/ambrosia"}, {"uid": "github/JGCRI/plutus", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/plutus", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/plutus"}, {"uid": "github/fstrozzi/Fastool", "html_url": "https://rseng.github.io/software/repository/github/fstrozzi/Fastool", "api_url": "https://rseng.github.io/software/api/repos/github/fstrozzi/Fastool"}, {"uid": "github/muttenthalerlab/PeptideMiner", "html_url": "https://rseng.github.io/software/repository/github/muttenthalerlab/PeptideMiner", "api_url": "https://rseng.github.io/software/api/repos/github/muttenthalerlab/PeptideMiner"}, {"uid": "github/chervias/DustFilaments", "html_url": "https://rseng.github.io/software/repository/github/chervias/DustFilaments", "api_url": "https://rseng.github.io/software/api/repos/github/chervias/DustFilaments"}, {"uid": "github/martinjzhang/scDRS", "html_url": "https://rseng.github.io/software/repository/github/martinjzhang/scDRS", "api_url": "https://rseng.github.io/software/api/repos/github/martinjzhang/scDRS"}, {"uid": "github/markblokpoel/mathlib", "html_url": "https://rseng.github.io/software/repository/github/markblokpoel/mathlib", "api_url": "https://rseng.github.io/software/api/repos/github/markblokpoel/mathlib"}, {"uid": "github/ianfhunter/GNOLL", "html_url": "https://rseng.github.io/software/repository/github/ianfhunter/GNOLL", "api_url": "https://rseng.github.io/software/api/repos/github/ianfhunter/GNOLL"}, {"uid": "github/ants-project/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ants-project/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ants-project/ANTs"}, {"uid": "github/SpyDust/SpyDust", "html_url": "https://rseng.github.io/software/repository/github/SpyDust/SpyDust", "api_url": "https://rseng.github.io/software/api/repos/github/SpyDust/SpyDust"}, {"uid": "github/alejostark/phase_space_cosmo_fisher", "html_url": "https://rseng.github.io/software/repository/github/alejostark/phase_space_cosmo_fisher", "api_url": "https://rseng.github.io/software/api/repos/github/alejostark/phase_space_cosmo_fisher"}, {"uid": "github/SPARC-FAIR-Codeathon/aqua", "html_url": "https://rseng.github.io/software/repository/github/SPARC-FAIR-Codeathon/aqua", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-FAIR-Codeathon/aqua"}, {"uid": "github/mkunimoto/LEO-vetter", "html_url": "https://rseng.github.io/software/repository/github/mkunimoto/LEO-vetter", "api_url": "https://rseng.github.io/software/api/repos/github/mkunimoto/LEO-vetter"}, {"uid": "github/libdynd/dynd-python", "html_url": "https://rseng.github.io/software/repository/github/libdynd/dynd-python", "api_url": "https://rseng.github.io/software/api/repos/github/libdynd/dynd-python"}, {"uid": "github/PhenoApps/Coordinate", "html_url": "https://rseng.github.io/software/repository/github/PhenoApps/Coordinate", "api_url": "https://rseng.github.io/software/api/repos/github/PhenoApps/Coordinate"}, {"uid": "github/rribeiro-sci/pygomodo", "html_url": "https://rseng.github.io/software/repository/github/rribeiro-sci/pygomodo", "api_url": "https://rseng.github.io/software/api/repos/github/rribeiro-sci/pygomodo"}, {"uid": "github/ukoethe/vigra", "html_url": "https://rseng.github.io/software/repository/github/ukoethe/vigra", "api_url": "https://rseng.github.io/software/api/repos/github/ukoethe/vigra"}, {"uid": "github/jkrogager/VoigtFit", "html_url": "https://rseng.github.io/software/repository/github/jkrogager/VoigtFit", "api_url": "https://rseng.github.io/software/api/repos/github/jkrogager/VoigtFit"}, {"uid": "github/bow/crimson", "html_url": "https://rseng.github.io/software/repository/github/bow/crimson", "api_url": "https://rseng.github.io/software/api/repos/github/bow/crimson"}, {"uid": "github/bow/fsnviz", "html_url": "https://rseng.github.io/software/repository/github/bow/fsnviz", "api_url": "https://rseng.github.io/software/api/repos/github/bow/fsnviz"}, {"uid": "github/fkeruzore/picasso", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/picasso"}, {"uid": "github/fkeruzore/panco2", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/panco2", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/panco2"}, {"uid": "github/fkeruzore/halox", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/halox", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/halox"}, {"uid": "github/tschad/pycelp", "html_url": "https://rseng.github.io/software/repository/github/tschad/pycelp", "api_url": "https://rseng.github.io/software/api/repos/github/tschad/pycelp"}, {"uid": "github/StevenGolovkine/FDApy", "html_url": "https://rseng.github.io/software/repository/github/StevenGolovkine/FDApy", "api_url": "https://rseng.github.io/software/api/repos/github/StevenGolovkine/FDApy"}, {"uid": "github/xfengnefx/hifiasm-meta", "html_url": "https://rseng.github.io/software/repository/github/xfengnefx/hifiasm-meta", "api_url": "https://rseng.github.io/software/api/repos/github/xfengnefx/hifiasm-meta"}, {"uid": "github/AtrCheema/SeqMetrics", "html_url": "https://rseng.github.io/software/repository/github/AtrCheema/SeqMetrics", "api_url": "https://rseng.github.io/software/api/repos/github/AtrCheema/SeqMetrics"}, {"uid": "github/JD2112/methylr", "html_url": "https://rseng.github.io/software/repository/github/JD2112/methylr", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/methylr"}, {"uid": "github/JD2112/TwistMethylFlow", "html_url": "https://rseng.github.io/software/repository/github/JD2112/TwistMethylFlow", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/TwistMethylFlow"}, {"uid": "github/hombit/freddi", "html_url": "https://rseng.github.io/software/repository/github/hombit/freddi", "api_url": "https://rseng.github.io/software/api/repos/github/hombit/freddi"}, {"uid": "github/abonaldi/TRECS", "html_url": "https://rseng.github.io/software/repository/github/abonaldi/TRECS", "api_url": "https://rseng.github.io/software/api/repos/github/abonaldi/TRECS"}, {"uid": "github/SchedMD/slurm", "html_url": "https://rseng.github.io/software/repository/github/SchedMD/slurm", "api_url": "https://rseng.github.io/software/api/repos/github/SchedMD/slurm"}, {"uid": "github/jendelel/PrankWebApp", "html_url": "https://rseng.github.io/software/repository/github/jendelel/PrankWebApp", "api_url": "https://rseng.github.io/software/api/repos/github/jendelel/PrankWebApp"}, {"uid": "github/ConnorStoneAstro/AutoProf", "html_url": "https://rseng.github.io/software/repository/github/ConnorStoneAstro/AutoProf", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorStoneAstro/AutoProf"}, {"uid": "github/AMSSwanglab/SpecVar", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/SpecVar", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/SpecVar"}, {"uid": "github/AMSSwanglab/RE-GOA", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/RE-GOA", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/RE-GOA"}, {"uid": "github/santeripuranen/SpydrPick", "html_url": "https://rseng.github.io/software/repository/github/santeripuranen/SpydrPick", "api_url": "https://rseng.github.io/software/api/repos/github/santeripuranen/SpydrPick"}, {"uid": "github/KBNLresearch/ochre", "html_url": "https://rseng.github.io/software/repository/github/KBNLresearch/ochre", "api_url": "https://rseng.github.io/software/api/repos/github/KBNLresearch/ochre"}, {"uid": "github/soundata/soundata", "html_url": "https://rseng.github.io/software/repository/github/soundata/soundata", "api_url": "https://rseng.github.io/software/api/repos/github/soundata/soundata"}, {"uid": "github/sdss/marvin", "html_url": "https://rseng.github.io/software/repository/github/sdss/marvin", "api_url": "https://rseng.github.io/software/api/repos/github/sdss/marvin"}, {"uid": "github/BlueBrain/BlueCelluLab", "html_url": "https://rseng.github.io/software/repository/github/BlueBrain/BlueCelluLab", "api_url": "https://rseng.github.io/software/api/repos/github/BlueBrain/BlueCelluLab"}, {"uid": "github/openmopac/MOPAC", "html_url": "https://rseng.github.io/software/repository/github/openmopac/MOPAC", "api_url": "https://rseng.github.io/software/api/repos/github/openmopac/MOPAC"}, {"uid": "github/kowallus/mbgc", "html_url": "https://rseng.github.io/software/repository/github/kowallus/mbgc", "api_url": "https://rseng.github.io/software/api/repos/github/kowallus/mbgc"}, {"uid": "github/BiocomputeLab/paraSBOLv", "html_url": "https://rseng.github.io/software/repository/github/BiocomputeLab/paraSBOLv", "api_url": "https://rseng.github.io/software/api/repos/github/BiocomputeLab/paraSBOLv"}, {"uid": "github/ArkajyotiSaha/RandomForestsGLS", "html_url": "https://rseng.github.io/software/repository/github/ArkajyotiSaha/RandomForestsGLS", "api_url": "https://rseng.github.io/software/api/repos/github/ArkajyotiSaha/RandomForestsGLS"}, {"uid": "github/pysal/spopt", "html_url": "https://rseng.github.io/software/repository/github/pysal/spopt", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spopt"}, {"uid": "github/pysal/pysal", "html_url": "https://rseng.github.io/software/repository/github/pysal/pysal", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/pysal"}, {"uid": "github/pysal/spaghetti", "html_url": "https://rseng.github.io/software/repository/github/pysal/spaghetti", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spaghetti"}, {"uid": "github/kerkelae/disimpy", "html_url": "https://rseng.github.io/software/repository/github/kerkelae/disimpy", "api_url": "https://rseng.github.io/software/api/repos/github/kerkelae/disimpy"}, {"uid": "github/vwesselkamp/ernie-extension", "html_url": "https://rseng.github.io/software/repository/github/vwesselkamp/ernie-extension", "api_url": "https://rseng.github.io/software/api/repos/github/vwesselkamp/ernie-extension"}, {"uid": "github/Exo-TiC/ExoTiC-LD", "html_url": "https://rseng.github.io/software/repository/github/Exo-TiC/ExoTiC-LD", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-TiC/ExoTiC-LD"}, {"uid": "github/cbio-astar-tools/GeneCloudOmics", "html_url": "https://rseng.github.io/software/repository/github/cbio-astar-tools/GeneCloudOmics", "api_url": "https://rseng.github.io/software/api/repos/github/cbio-astar-tools/GeneCloudOmics"}, {"uid": "github/deepsphere/deepsphere-cosmo-tf1", "html_url": "https://rseng.github.io/software/repository/github/deepsphere/deepsphere-cosmo-tf1", "api_url": "https://rseng.github.io/software/api/repos/github/deepsphere/deepsphere-cosmo-tf1"}, {"uid": "github/ifilot/edp", "html_url": "https://rseng.github.io/software/repository/github/ifilot/edp", "api_url": "https://rseng.github.io/software/api/repos/github/ifilot/edp"}, {"uid": "github/DeepRank/iScore", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/iScore", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/iScore"}, {"uid": "github/DeepRank/deeprank", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank"}, {"uid": "github/DeepRank/pssmgen", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pssmgen", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pssmgen"}, {"uid": "github/DeepRank/deeprank-core", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank-core", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank-core"}, {"uid": "github/DeepRank/DeepRank-GNN", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/DeepRank-GNN", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/DeepRank-GNN"}, {"uid": "github/DeepRank/pdb2sql", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pdb2sql", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pdb2sql"}, {"uid": "github/kennethcarrell/ATARRI", "html_url": "https://rseng.github.io/software/repository/github/kennethcarrell/ATARRI", "api_url": "https://rseng.github.io/software/api/repos/github/kennethcarrell/ATARRI"}, {"uid": "github/DarkQuestCosmology/dark_emulator_public", "html_url": "https://rseng.github.io/software/repository/github/DarkQuestCosmology/dark_emulator_public", "api_url": "https://rseng.github.io/software/api/repos/github/DarkQuestCosmology/dark_emulator_public"}, {"uid": "github/henrikdvn/CRSocket", "html_url": "https://rseng.github.io/software/repository/github/henrikdvn/CRSocket", "api_url": "https://rseng.github.io/software/api/repos/github/henrikdvn/CRSocket"}, {"uid": "github/ColmTalbot/gwpopulation", "html_url": "https://rseng.github.io/software/repository/github/ColmTalbot/gwpopulation", "api_url": "https://rseng.github.io/software/api/repos/github/ColmTalbot/gwpopulation"}, {"uid": "github/rabrahm/ceres", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/ceres", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/ceres"}, {"uid": "github/rabrahm/zaspe", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/zaspe", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/zaspe"}, {"uid": "github/dkirkby/gphist", "html_url": "https://rseng.github.io/software/repository/github/dkirkby/gphist", "api_url": "https://rseng.github.io/software/api/repos/github/dkirkby/gphist"}, {"uid": "github/Dailer/RCausticMass", "html_url": "https://rseng.github.io/software/repository/github/Dailer/RCausticMass", "api_url": "https://rseng.github.io/software/api/repos/github/Dailer/RCausticMass"}, {"uid": "github/pyro-kinetics/pyrokinetics", "html_url": "https://rseng.github.io/software/repository/github/pyro-kinetics/pyrokinetics", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-kinetics/pyrokinetics"}, {"uid": "github/nimble-dev/nimbleHMC", "html_url": "https://rseng.github.io/software/repository/github/nimble-dev/nimbleHMC", "api_url": "https://rseng.github.io/software/api/repos/github/nimble-dev/nimbleHMC"}, {"uid": "github/jobovy/streamgap-pepper", "html_url": "https://rseng.github.io/software/repository/github/jobovy/streamgap-pepper", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/streamgap-pepper"}, {"uid": "github/jobovy/stream-stream", "html_url": "https://rseng.github.io/software/repository/github/jobovy/stream-stream", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/stream-stream"}, {"uid": "github/jobovy/simple-m2m", "html_url": "https://rseng.github.io/software/repository/github/jobovy/simple-m2m", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/simple-m2m"}, {"uid": "github/jobovy/extreme-deconvolution", "html_url": "https://rseng.github.io/software/repository/github/jobovy/extreme-deconvolution", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/extreme-deconvolution"}, {"uid": "github/jobovy/galpy", "html_url": "https://rseng.github.io/software/repository/github/jobovy/galpy", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/galpy"}, {"uid": "github/jobovy/apogee", "html_url": "https://rseng.github.io/software/repository/github/jobovy/apogee", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/apogee"}, {"uid": "github/jobovy/segueSelect", "html_url": "https://rseng.github.io/software/repository/github/jobovy/segueSelect", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/segueSelect"}, {"uid": "github/jobovy/gaia_tools", "html_url": "https://rseng.github.io/software/repository/github/jobovy/gaia_tools", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/gaia_tools"}, {"uid": "github/gogetdata/ggd-utils", "html_url": "https://rseng.github.io/software/repository/github/gogetdata/ggd-utils", "api_url": "https://rseng.github.io/software/api/repos/github/gogetdata/ggd-utils"}, {"uid": "github/sanctuuary/ape", "html_url": "https://rseng.github.io/software/repository/github/sanctuuary/ape", "api_url": "https://rseng.github.io/software/api/repos/github/sanctuuary/ape"}, {"uid": "github/iosefa/PyForestScan", "html_url": "https://rseng.github.io/software/repository/github/iosefa/PyForestScan", "api_url": "https://rseng.github.io/software/api/repos/github/iosefa/PyForestScan"}, {"uid": "github/bjmorgan/py-sc-fermi", "html_url": "https://rseng.github.io/software/repository/github/bjmorgan/py-sc-fermi", "api_url": "https://rseng.github.io/software/api/repos/github/bjmorgan/py-sc-fermi"}, {"uid": "github/maormizrachi/MadVoro", "html_url": "https://rseng.github.io/software/repository/github/maormizrachi/MadVoro", "api_url": "https://rseng.github.io/software/api/repos/github/maormizrachi/MadVoro"}, {"uid": "github/galactic-ai/haloflow", "html_url": "https://rseng.github.io/software/repository/github/galactic-ai/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/galactic-ai/haloflow"}, {"uid": "github/SciOmicsLab/PhenoComb", "html_url": "https://rseng.github.io/software/repository/github/SciOmicsLab/PhenoComb", "api_url": "https://rseng.github.io/software/api/repos/github/SciOmicsLab/PhenoComb"}, {"uid": "github/cjtu/craterpy", "html_url": "https://rseng.github.io/software/repository/github/cjtu/craterpy", "api_url": "https://rseng.github.io/software/api/repos/github/cjtu/craterpy"}, {"uid": "github/egjergo/galcem", "html_url": "https://rseng.github.io/software/repository/github/egjergo/galcem", "api_url": "https://rseng.github.io/software/api/repos/github/egjergo/galcem"}, {"uid": "github/hallamlab/TreeSAPP", "html_url": "https://rseng.github.io/software/repository/github/hallamlab/TreeSAPP", "api_url": "https://rseng.github.io/software/api/repos/github/hallamlab/TreeSAPP"}, {"uid": "github/single-cell-genetics/vireo", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/vireo", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/vireo"}, {"uid": "github/single-cell-genetics/cellsnp-lite", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/cellsnp-lite", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/cellsnp-lite"}, {"uid": "github/GreiffLab/immuneREF", "html_url": "https://rseng.github.io/software/repository/github/GreiffLab/immuneREF", "api_url": "https://rseng.github.io/software/api/repos/github/GreiffLab/immuneREF"}, {"uid": "github/codemeleon/seqPanther", "html_url": "https://rseng.github.io/software/repository/github/codemeleon/seqPanther", "api_url": "https://rseng.github.io/software/api/repos/github/codemeleon/seqPanther"}, {"uid": "github/astropy/SPISEA", "html_url": "https://rseng.github.io/software/repository/github/astropy/SPISEA", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/SPISEA"}, {"uid": "github/astropy/halotools", "html_url": "https://rseng.github.io/software/repository/github/astropy/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/halotools"}, {"uid": "github/astropy/astroplan", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroplan", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroplan"}, {"uid": "github/astropy/astropy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astropy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astropy"}, {"uid": "github/astropy/astroscrappy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroscrappy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroscrappy"}, {"uid": "github/astropy/specutils", "html_url": "https://rseng.github.io/software/repository/github/astropy/specutils", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/specutils"}, {"uid": "github/astropy/ccdproc", "html_url": "https://rseng.github.io/software/repository/github/astropy/ccdproc", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/ccdproc"}, {"uid": "github/astropy/astroquery", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroquery", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroquery"}, {"uid": "github/jaimerzp/limberjack.jl", "html_url": "https://rseng.github.io/software/repository/github/jaimerzp/limberjack.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jaimerzp/limberjack.jl"}, {"uid": "github/mlarichardson/ramses2hsim", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/ramses2hsim", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/ramses2hsim"}, {"uid": "github/mlarichardson/CosmosCanvas", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/CosmosCanvas", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/CosmosCanvas"}, {"uid": "github/a-slide/pycoQC", "html_url": "https://rseng.github.io/software/repository/github/a-slide/pycoQC", "api_url": "https://rseng.github.io/software/api/repos/github/a-slide/pycoQC"}, {"uid": "github/mlhutchins/LWPC", "html_url": "https://rseng.github.io/software/repository/github/mlhutchins/LWPC", "api_url": "https://rseng.github.io/software/api/repos/github/mlhutchins/LWPC"}, {"uid": "github/SJTU-CGM/ivTerm", "html_url": "https://rseng.github.io/software/repository/github/SJTU-CGM/ivTerm", "api_url": "https://rseng.github.io/software/api/repos/github/SJTU-CGM/ivTerm"}, {"uid": "github/catboost/catboost", "html_url": "https://rseng.github.io/software/repository/github/catboost/catboost", "api_url": "https://rseng.github.io/software/api/repos/github/catboost/catboost"}, {"uid": "github/TheMillerLab/genetex", "html_url": "https://rseng.github.io/software/repository/github/TheMillerLab/genetex", "api_url": "https://rseng.github.io/software/api/repos/github/TheMillerLab/genetex"}, {"uid": "github/adtzlr/felupe", "html_url": "https://rseng.github.io/software/repository/github/adtzlr/felupe", "api_url": "https://rseng.github.io/software/api/repos/github/adtzlr/felupe"}, {"uid": "github/dstansby/pfsspy", "html_url": "https://rseng.github.io/software/repository/github/dstansby/pfsspy", "api_url": "https://rseng.github.io/software/api/repos/github/dstansby/pfsspy"}, {"uid": "github/DataIntellSystLab/KARGA", "html_url": "https://rseng.github.io/software/repository/github/DataIntellSystLab/KARGA", "api_url": "https://rseng.github.io/software/api/repos/github/DataIntellSystLab/KARGA"}, {"uid": "github/saopicc/DDFacet", "html_url": "https://rseng.github.io/software/repository/github/saopicc/DDFacet", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/DDFacet"}, {"uid": "github/saopicc/killMS", "html_url": "https://rseng.github.io/software/repository/github/saopicc/killMS", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/killMS"}, {"uid": "github/quinlanW/dbMisLoc", "html_url": "https://rseng.github.io/software/repository/github/quinlanW/dbMisLoc", "api_url": "https://rseng.github.io/software/api/repos/github/quinlanW/dbMisLoc"}, {"uid": "github/PfizerRD/sit2standpy", "html_url": "https://rseng.github.io/software/repository/github/PfizerRD/sit2standpy", "api_url": "https://rseng.github.io/software/api/repos/github/PfizerRD/sit2standpy"}, {"uid": "github/datngu/Circall", "html_url": "https://rseng.github.io/software/repository/github/datngu/Circall", "api_url": "https://rseng.github.io/software/api/repos/github/datngu/Circall"}, {"uid": "github/ropensci-review-tools/pkgcheck", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgcheck"}, {"uid": "github/ropensci-review-tools/autotest", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/autotest", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/autotest"}, {"uid": "github/ropensci-review-tools/pkgstats", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgstats", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgstats"}, {"uid": "github/ropensci-review-tools/roreviewapi", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/roreviewapi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/roreviewapi"}, {"uid": "github/ropensci-review-tools/srr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/srr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/srr"}, {"uid": "github/PrincetonUniversity/FastTemplatePeriodogram", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/FastTemplatePeriodogram"}, {"uid": "github/PrincetonUniversity/athena", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/athena", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/athena"}, {"uid": "github/PrincetonUniversity/Athena-Cversion", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/Athena-Cversion", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/Athena-Cversion"}, {"uid": "github/bcerutti/Zeltron-code", "html_url": "https://rseng.github.io/software/repository/github/bcerutti/Zeltron-code", "api_url": "https://rseng.github.io/software/api/repos/github/bcerutti/Zeltron-code"}, {"uid": "github/mrvollger/fibertools-rs", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/fibertools-rs", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/fibertools-rs"}, {"uid": "github/mrvollger/rustybam", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/rustybam", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/rustybam"}, {"uid": "github/bmorris3/aesop", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/aesop", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/aesop"}, {"uid": "github/bmorris3/fleck", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/fleck", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/fleck"}, {"uid": "github/jeremysanders/mbproj2", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/mbproj2", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/mbproj2"}, {"uid": "github/jeremysanders/dsdeproj", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/dsdeproj", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/dsdeproj"}, {"uid": "github/jeremysanders/contbin", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/contbin", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/contbin"}, {"uid": "github/jeremysanders/xspec_emcee", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/xspec_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/xspec_emcee"}, {"uid": "github/jeremysanders/spex_to_xspec", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/spex_to_xspec", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/spex_to_xspec"}, {"uid": "github/jeremysanders/ggm", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/ggm", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/ggm"}, {"uid": "github/MICCoM/SSAGES-public", "html_url": "https://rseng.github.io/software/repository/github/MICCoM/SSAGES-public", "api_url": "https://rseng.github.io/software/api/repos/github/MICCoM/SSAGES-public"}, {"uid": "github/galkintool/galkin", "html_url": "https://rseng.github.io/software/repository/github/galkintool/galkin", "api_url": "https://rseng.github.io/software/api/repos/github/galkintool/galkin"}, {"uid": "github/andycasey/smhr", "html_url": "https://rseng.github.io/software/repository/github/andycasey/smhr", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/smhr"}, {"uid": "github/andycasey/sick", "html_url": "https://rseng.github.io/software/repository/github/andycasey/sick", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/sick"}, {"uid": "github/ALive-research/Slicer-Liver", "html_url": "https://rseng.github.io/software/repository/github/ALive-research/Slicer-Liver", "api_url": "https://rseng.github.io/software/api/repos/github/ALive-research/Slicer-Liver"}, {"uid": "github/annacrnn/rebound_fragmentation", "html_url": "https://rseng.github.io/software/repository/github/annacrnn/rebound_fragmentation", "api_url": "https://rseng.github.io/software/api/repos/github/annacrnn/rebound_fragmentation"}, {"uid": "github/bareid/cosmoxi2d", "html_url": "https://rseng.github.io/software/repository/github/bareid/cosmoxi2d", "api_url": "https://rseng.github.io/software/api/repos/github/bareid/cosmoxi2d"}, {"uid": "github/kartheikiyer/dense_basis", "html_url": "https://rseng.github.io/software/repository/github/kartheikiyer/dense_basis", "api_url": "https://rseng.github.io/software/api/repos/github/kartheikiyer/dense_basis"}, {"uid": "github/ekerrison/RadioSED", "html_url": "https://rseng.github.io/software/repository/github/ekerrison/RadioSED", "api_url": "https://rseng.github.io/software/api/repos/github/ekerrison/RadioSED"}, {"uid": "github/PopovIILab/KrakenParser", "html_url": "https://rseng.github.io/software/repository/github/PopovIILab/KrakenParser", "api_url": "https://rseng.github.io/software/api/repos/github/PopovIILab/KrakenParser"}, {"uid": "github/weecology/retriever", "html_url": "https://rseng.github.io/software/repository/github/weecology/retriever", "api_url": "https://rseng.github.io/software/api/repos/github/weecology/retriever"}, {"uid": "github/lpfworld/DMPNet", "html_url": "https://rseng.github.io/software/repository/github/lpfworld/DMPNet", "api_url": "https://rseng.github.io/software/api/repos/github/lpfworld/DMPNet"}, {"uid": "github/YaleTHz/nelly", "html_url": "https://rseng.github.io/software/repository/github/YaleTHz/nelly", "api_url": "https://rseng.github.io/software/api/repos/github/YaleTHz/nelly"}, {"uid": "github/gijut/gnucash", "html_url": "https://rseng.github.io/software/repository/github/gijut/gnucash", "api_url": "https://rseng.github.io/software/api/repos/github/gijut/gnucash"}, {"uid": "github/pkgw/pwkit", "html_url": "https://rseng.github.io/software/repository/github/pkgw/pwkit", "api_url": "https://rseng.github.io/software/api/repos/github/pkgw/pwkit"}, {"uid": "github/Planet-AI-GmbH/tfaip", "html_url": "https://rseng.github.io/software/repository/github/Planet-AI-GmbH/tfaip", "api_url": "https://rseng.github.io/software/api/repos/github/Planet-AI-GmbH/tfaip"}, {"uid": "github/gkulkarni/QLF", "html_url": "https://rseng.github.io/software/repository/github/gkulkarni/QLF", "api_url": "https://rseng.github.io/software/api/repos/github/gkulkarni/QLF"}, {"uid": "github/sodascience/metasyn", "html_url": "https://rseng.github.io/software/repository/github/sodascience/metasyn", "api_url": "https://rseng.github.io/software/api/repos/github/sodascience/metasyn"}, {"uid": "github/mjuric/galfast", "html_url": "https://rseng.github.io/software/repository/github/mjuric/galfast", "api_url": "https://rseng.github.io/software/api/repos/github/mjuric/galfast"}, {"uid": "github/ideasrule/pyTPCI", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/pyTPCI", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/pyTPCI"}, {"uid": "github/ideasrule/platon", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/platon", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/platon"}, {"uid": "github/OttoStruve/muler", "html_url": "https://rseng.github.io/software/repository/github/OttoStruve/muler", "api_url": "https://rseng.github.io/software/api/repos/github/OttoStruve/muler"}, {"uid": "github/farhanferoz/SkyNet", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/SkyNet", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/SkyNet"}, {"uid": "github/farhanferoz/MultiNest", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/MultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/MultiNest"}, {"uid": "github/farhanferoz/BAMBI", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/BAMBI", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/BAMBI"}, {"uid": "github/Natsiopoulos/ARDL", "html_url": "https://rseng.github.io/software/repository/github/Natsiopoulos/ARDL", "api_url": "https://rseng.github.io/software/api/repos/github/Natsiopoulos/ARDL"}, {"uid": "github/r-spatialecology/shar", "html_url": "https://rseng.github.io/software/repository/github/r-spatialecology/shar", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatialecology/shar"}, {"uid": "github/jiffyclub/palettable", "html_url": "https://rseng.github.io/software/repository/github/jiffyclub/palettable", "api_url": "https://rseng.github.io/software/api/repos/github/jiffyclub/palettable"}, {"uid": "github/bioinfo-ut/GenomeTester4", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/GenomeTester4", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/GenomeTester4"}, {"uid": "github/bioinfo-ut/PlasmidSeeker", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/PlasmidSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/PlasmidSeeker"}, {"uid": "github/timothyas/xesn", "html_url": "https://rseng.github.io/software/repository/github/timothyas/xesn", "api_url": "https://rseng.github.io/software/api/repos/github/timothyas/xesn"}, {"uid": "github/artic-network/readucks", "html_url": "https://rseng.github.io/software/repository/github/artic-network/readucks", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/readucks"}, {"uid": "github/artic-network/fieldbioinformatics", "html_url": "https://rseng.github.io/software/repository/github/artic-network/fieldbioinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/fieldbioinformatics"}, {"uid": "github/klb2/qmkpy", "html_url": "https://rseng.github.io/software/repository/github/klb2/qmkpy", "api_url": "https://rseng.github.io/software/api/repos/github/klb2/qmkpy"}, {"uid": "github/p-sira/ellip", "html_url": "https://rseng.github.io/software/repository/github/p-sira/ellip", "api_url": "https://rseng.github.io/software/api/repos/github/p-sira/ellip"}, {"uid": "github/fripon/freeture", "html_url": "https://rseng.github.io/software/repository/github/fripon/freeture", "api_url": "https://rseng.github.io/software/api/repos/github/fripon/freeture"}, {"uid": "github/jrkerns/pylinac", "html_url": "https://rseng.github.io/software/repository/github/jrkerns/pylinac", "api_url": "https://rseng.github.io/software/api/repos/github/jrkerns/pylinac"}, {"uid": "github/jorgensd/adios4dolfinx", "html_url": "https://rseng.github.io/software/repository/github/jorgensd/adios4dolfinx", "api_url": "https://rseng.github.io/software/api/repos/github/jorgensd/adios4dolfinx"}, {"uid": "github/vocalpy/crowsetta", "html_url": "https://rseng.github.io/software/repository/github/vocalpy/crowsetta", "api_url": "https://rseng.github.io/software/api/repos/github/vocalpy/crowsetta"}, {"uid": "github/MNGuenther/allesfitter", "html_url": "https://rseng.github.io/software/repository/github/MNGuenther/allesfitter", "api_url": "https://rseng.github.io/software/api/repos/github/MNGuenther/allesfitter"}, {"uid": "github/signalling-games-org/evoke", "html_url": "https://rseng.github.io/software/repository/github/signalling-games-org/evoke", "api_url": "https://rseng.github.io/software/api/repos/github/signalling-games-org/evoke"}, {"uid": "github/mzemp/halogen", "html_url": "https://rseng.github.io/software/repository/github/mzemp/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/mzemp/halogen"}, {"uid": "github/ANTsX/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ANTsX/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ANTsX/ANTs"}, {"uid": "github/eucp-project/storyboards", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/storyboards", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/storyboards"}, {"uid": "github/eucp-project/atlas", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/atlas", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/atlas"}, {"uid": "github/rferdman/afr", "html_url": "https://rseng.github.io/software/repository/github/rferdman/afr", "api_url": "https://rseng.github.io/software/api/repos/github/rferdman/afr"}, {"uid": "github/drgmk/vis-r", "html_url": "https://rseng.github.io/software/repository/github/drgmk/vis-r", "api_url": "https://rseng.github.io/software/api/repos/github/drgmk/vis-r"}, {"uid": "github/DKMS/hapl-o-Mat_WinBin", "html_url": "https://rseng.github.io/software/repository/github/DKMS/hapl-o-Mat_WinBin", "api_url": "https://rseng.github.io/software/api/repos/github/DKMS/hapl-o-Mat_WinBin"}, {"uid": "github/tofflemire/saphires", "html_url": "https://rseng.github.io/software/repository/github/tofflemire/saphires", "api_url": "https://rseng.github.io/software/api/repos/github/tofflemire/saphires"}, {"uid": "github/alekseyzimin/ufasta", "html_url": "https://rseng.github.io/software/repository/github/alekseyzimin/ufasta", "api_url": "https://rseng.github.io/software/api/repos/github/alekseyzimin/ufasta"}, {"uid": "github/dask/dask", "html_url": "https://rseng.github.io/software/repository/github/dask/dask", "api_url": "https://rseng.github.io/software/api/repos/github/dask/dask"}, {"uid": "github/kkma89/dmcalc", "html_url": "https://rseng.github.io/software/repository/github/kkma89/dmcalc", "api_url": "https://rseng.github.io/software/api/repos/github/kkma89/dmcalc"}, {"uid": "github/LangeLab/SQuAPP", "html_url": "https://rseng.github.io/software/repository/github/LangeLab/SQuAPP", "api_url": "https://rseng.github.io/software/api/repos/github/LangeLab/SQuAPP"}, {"uid": "github/seisman/HinetPy", "html_url": "https://rseng.github.io/software/repository/github/seisman/HinetPy", "api_url": "https://rseng.github.io/software/api/repos/github/seisman/HinetPy"}, {"uid": "github/BasilioRuiz/SIR-code", "html_url": "https://rseng.github.io/software/repository/github/BasilioRuiz/SIR-code", "api_url": "https://rseng.github.io/software/api/repos/github/BasilioRuiz/SIR-code"}, {"uid": "github/FarnazFouladi/HashSeq_Manuscript", "html_url": "https://rseng.github.io/software/repository/github/FarnazFouladi/HashSeq_Manuscript", "api_url": "https://rseng.github.io/software/api/repos/github/FarnazFouladi/HashSeq_Manuscript"}, {"uid": "github/wcxve/elisa", "html_url": "https://rseng.github.io/software/repository/github/wcxve/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/wcxve/elisa"}, {"uid": "github/biocore/emperor", "html_url": "https://rseng.github.io/software/repository/github/biocore/emperor", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/emperor"}, {"uid": "github/biocore/unifrac", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac"}, {"uid": "github/biocore/unifrac-binaries", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac-binaries", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac-binaries"}, {"uid": "github/biocore/sortmerna", "html_url": "https://rseng.github.io/software/repository/github/biocore/sortmerna", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/sortmerna"}, {"uid": "github/biocore/scikit-bio", "html_url": "https://rseng.github.io/software/repository/github/biocore/scikit-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/scikit-bio"}, {"uid": "github/biocore/deblur", "html_url": "https://rseng.github.io/software/repository/github/biocore/deblur", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/deblur"}, {"uid": "github/thraraujo/pysymmpol", "html_url": "https://rseng.github.io/software/repository/github/thraraujo/pysymmpol", "api_url": "https://rseng.github.io/software/api/repos/github/thraraujo/pysymmpol"}, {"uid": "github/mtlam/PyPulse", "html_url": "https://rseng.github.io/software/repository/github/mtlam/PyPulse", "api_url": "https://rseng.github.io/software/api/repos/github/mtlam/PyPulse"}, {"uid": "github/JuliaQuantumControl/GRAPE.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQuantumControl/GRAPE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQuantumControl/GRAPE.jl"}, {"uid": "github/GreenBankObservatory/gbtgridder", "html_url": "https://rseng.github.io/software/repository/github/GreenBankObservatory/gbtgridder", "api_url": "https://rseng.github.io/software/api/repos/github/GreenBankObservatory/gbtgridder"}, {"uid": "github/IKNL/vantage6", "html_url": "https://rseng.github.io/software/repository/github/IKNL/vantage6", "api_url": "https://rseng.github.io/software/api/repos/github/IKNL/vantage6"}, {"uid": "github/tjlcbakx/redshift-search-graphs", "html_url": "https://rseng.github.io/software/repository/github/tjlcbakx/redshift-search-graphs", "api_url": "https://rseng.github.io/software/api/repos/github/tjlcbakx/redshift-search-graphs"}, {"uid": "github/berczik/phi-GPU-mole", "html_url": "https://rseng.github.io/software/repository/github/berczik/phi-GPU-mole", "api_url": "https://rseng.github.io/software/api/repos/github/berczik/phi-GPU-mole"}, {"uid": "github/neuromodulation/py_neuromodulation", "html_url": "https://rseng.github.io/software/repository/github/neuromodulation/py_neuromodulation", "api_url": "https://rseng.github.io/software/api/repos/github/neuromodulation/py_neuromodulation"}, {"uid": "github/bioinform/somaticseq", "html_url": "https://rseng.github.io/software/repository/github/bioinform/somaticseq", "api_url": "https://rseng.github.io/software/api/repos/github/bioinform/somaticseq"}, {"uid": "github/usnistgov/imppy3d", "html_url": "https://rseng.github.io/software/repository/github/usnistgov/imppy3d", "api_url": "https://rseng.github.io/software/api/repos/github/usnistgov/imppy3d"}, {"uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy"}, {"uid": "github/SzokeMark-Andor/AstroDataProcessing", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/AstroDataProcessing", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/AstroDataProcessing"}, {"uid": "github/bcalden/ClusterPyXT", "html_url": "https://rseng.github.io/software/repository/github/bcalden/ClusterPyXT", "api_url": "https://rseng.github.io/software/api/repos/github/bcalden/ClusterPyXT"}, {"uid": "github/annagraff/densify", "html_url": "https://rseng.github.io/software/repository/github/annagraff/densify", "api_url": "https://rseng.github.io/software/api/repos/github/annagraff/densify"}, {"uid": "github/songlabcodes/MSC", "html_url": "https://rseng.github.io/software/repository/github/songlabcodes/MSC", "api_url": "https://rseng.github.io/software/api/repos/github/songlabcodes/MSC"}, {"uid": "github/stefanofisc/dartvetter_apj", "html_url": "https://rseng.github.io/software/repository/github/stefanofisc/dartvetter_apj", "api_url": "https://rseng.github.io/software/api/repos/github/stefanofisc/dartvetter_apj"}, {"uid": "github/prajwel/curvit", "html_url": "https://rseng.github.io/software/repository/github/prajwel/curvit", "api_url": "https://rseng.github.io/software/api/repos/github/prajwel/curvit"}, {"uid": "github/bokunoBike/m6AGE", "html_url": "https://rseng.github.io/software/repository/github/bokunoBike/m6AGE", "api_url": "https://rseng.github.io/software/api/repos/github/bokunoBike/m6AGE"}, {"uid": "github/biod/sambamba", "html_url": "https://rseng.github.io/software/repository/github/biod/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/biod/sambamba"}, {"uid": "github/oruhnau/when2heat", "html_url": "https://rseng.github.io/software/repository/github/oruhnau/when2heat", "api_url": "https://rseng.github.io/software/api/repos/github/oruhnau/when2heat"}, {"uid": "github/fredericlemoine/goalign", "html_url": "https://rseng.github.io/software/repository/github/fredericlemoine/goalign", "api_url": "https://rseng.github.io/software/api/repos/github/fredericlemoine/goalign"}, {"uid": "github/bandframework/Taweret", "html_url": "https://rseng.github.io/software/repository/github/bandframework/Taweret", "api_url": "https://rseng.github.io/software/api/repos/github/bandframework/Taweret"}, {"uid": "github/PCMSolver/pcmsolver", "html_url": "https://rseng.github.io/software/repository/github/PCMSolver/pcmsolver", "api_url": "https://rseng.github.io/software/api/repos/github/PCMSolver/pcmsolver"}, {"uid": "github/florent-leclercq/pyselfi", "html_url": "https://rseng.github.io/software/repository/github/florent-leclercq/pyselfi", "api_url": "https://rseng.github.io/software/api/repos/github/florent-leclercq/pyselfi"}, {"uid": "github/astro-seanwhy/ExoInt", "html_url": "https://rseng.github.io/software/repository/github/astro-seanwhy/ExoInt", "api_url": "https://rseng.github.io/software/api/repos/github/astro-seanwhy/ExoInt"}, {"uid": "github/EmmanuelSchaan/LensQuEst", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LensQuEst", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LensQuEst"}, {"uid": "github/EmmanuelSchaan/ThumbStack", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/ThumbStack", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/ThumbStack"}, {"uid": "github/EmmanuelSchaan/HaloGen", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/HaloGen", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/HaloGen"}, {"uid": "github/EmmanuelSchaan/LaSSI", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LaSSI", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LaSSI"}, {"uid": "github/CoastEgo/microlux", "html_url": "https://rseng.github.io/software/repository/github/CoastEgo/microlux", "api_url": "https://rseng.github.io/software/api/repos/github/CoastEgo/microlux"}, {"uid": "github/NLESC-JCER/QMCblip", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCblip", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCblip"}, {"uid": "github/NLESC-JCER/QMCTorch", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCTorch", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCTorch"}, {"uid": "github/NLESC-JCER/EigenCuda", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/EigenCuda", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/EigenCuda"}, {"uid": "github/NLESC-JCER/Fortran_Davidson", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/Fortran_Davidson", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/Fortran_Davidson"}, {"uid": "github/vijayvarma392/binaryBHexp", "html_url": "https://rseng.github.io/software/repository/github/vijayvarma392/binaryBHexp", "api_url": "https://rseng.github.io/software/api/repos/github/vijayvarma392/binaryBHexp"}, {"uid": "github/AsterLight0626/Twinkle", "html_url": "https://rseng.github.io/software/repository/github/AsterLight0626/Twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/AsterLight0626/Twinkle"}, {"uid": "github/IBMTRostock/GIFT", "html_url": "https://rseng.github.io/software/repository/github/IBMTRostock/GIFT", "api_url": "https://rseng.github.io/software/api/repos/github/IBMTRostock/GIFT"}, {"uid": "github/GEUS-Glaciology-and-Climate/GrIML", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/GrIML"}, {"uid": "github/GEUS-Glaciology-and-Climate/pypromice", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/pypromice"}, {"uid": "github/RETURN-project/BenchmarkRecovery", "html_url": "https://rseng.github.io/software/repository/github/RETURN-project/BenchmarkRecovery", "api_url": "https://rseng.github.io/software/api/repos/github/RETURN-project/BenchmarkRecovery"}, {"uid": "github/Ensembl/WiggleTools", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/WiggleTools", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/WiggleTools"}, {"uid": "github/Ensembl/ensembl-vep", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/ensembl-vep", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/ensembl-vep"}, {"uid": "github/tylertrimble/viswaternet", "html_url": "https://rseng.github.io/software/repository/github/tylertrimble/viswaternet", "api_url": "https://rseng.github.io/software/api/repos/github/tylertrimble/viswaternet"}, {"uid": "github/tomalf2/recombinhunt-cov", "html_url": "https://rseng.github.io/software/repository/github/tomalf2/recombinhunt-cov", "api_url": "https://rseng.github.io/software/api/repos/github/tomalf2/recombinhunt-cov"}, {"uid": "github/floodlight-sports/floodlight", "html_url": "https://rseng.github.io/software/repository/github/floodlight-sports/floodlight", "api_url": "https://rseng.github.io/software/api/repos/github/floodlight-sports/floodlight"}, {"uid": "github/izsvenezie-virology/genin2", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/genin2", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/genin2"}, {"uid": "github/izsvenezie-virology/FluMut", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/FluMut", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/FluMut"}, {"uid": "github/umbralcalc/nfield", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/nfield", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/nfield"}, {"uid": "github/umbralcalc/foxi", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/foxi", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/foxi"}, {"uid": "github/umbralcalc/helmpy", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/helmpy", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/helmpy"}, {"uid": "github/svi-opensource/libics", "html_url": "https://rseng.github.io/software/repository/github/svi-opensource/libics", "api_url": "https://rseng.github.io/software/api/repos/github/svi-opensource/libics"}, {"uid": "github/quantling/pyndl", "html_url": "https://rseng.github.io/software/repository/github/quantling/pyndl", "api_url": "https://rseng.github.io/software/api/repos/github/quantling/pyndl"}, {"uid": "github/dipto4/falcon_dm", "html_url": "https://rseng.github.io/software/repository/github/dipto4/falcon_dm", "api_url": "https://rseng.github.io/software/api/repos/github/dipto4/falcon_dm"}, {"uid": "github/arnauqb/Qwind.jl", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/Qwind.jl", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/Qwind.jl"}, {"uid": "github/arnauqb/qwind", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/qwind", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/qwind"}, {"uid": "github/davidsoergel/rtax", "html_url": "https://rseng.github.io/software/repository/github/davidsoergel/rtax", "api_url": "https://rseng.github.io/software/api/repos/github/davidsoergel/rtax"}, {"uid": "github/lu-yizhou/ClusterSeg", "html_url": "https://rseng.github.io/software/repository/github/lu-yizhou/ClusterSeg", "api_url": "https://rseng.github.io/software/api/repos/github/lu-yizhou/ClusterSeg"}, {"uid": "github/wetransform-os/ProMCDA", "html_url": "https://rseng.github.io/software/repository/github/wetransform-os/ProMCDA", "api_url": "https://rseng.github.io/software/api/repos/github/wetransform-os/ProMCDA"}, {"uid": "github/BapMel/mesocalc", "html_url": "https://rseng.github.io/software/repository/github/BapMel/mesocalc", "api_url": "https://rseng.github.io/software/api/repos/github/BapMel/mesocalc"}, {"uid": "github/Jieyu126/Jitter", "html_url": "https://rseng.github.io/software/repository/github/Jieyu126/Jitter", "api_url": "https://rseng.github.io/software/api/repos/github/Jieyu126/Jitter"}, {"uid": "github/idem-lab/conmat", "html_url": "https://rseng.github.io/software/repository/github/idem-lab/conmat", "api_url": "https://rseng.github.io/software/api/repos/github/idem-lab/conmat"}, {"uid": "github/joannegger/plaNETic", "html_url": "https://rseng.github.io/software/repository/github/joannegger/plaNETic", "api_url": "https://rseng.github.io/software/api/repos/github/joannegger/plaNETic"}, {"uid": "github/lifs-tools/goslin", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/goslin", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/goslin"}, {"uid": "github/lifs-tools/jmzTab-m", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/jmzTab-m", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/jmzTab-m"}, {"uid": "github/ClusterMonteCarlo/CMC-COSMIC", "html_url": "https://rseng.github.io/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ClusterMonteCarlo/CMC-COSMIC"}, {"uid": "github/DrexelLenser/Lenser", "html_url": "https://rseng.github.io/software/repository/github/DrexelLenser/Lenser", "api_url": "https://rseng.github.io/software/api/repos/github/DrexelLenser/Lenser"}, {"uid": "github/ejikeugba/serp", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/serp", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/serp"}, {"uid": "github/ejikeugba/gofcat", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/gofcat", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/gofcat"}, {"uid": "github/project-lighter/lighter", "html_url": "https://rseng.github.io/software/repository/github/project-lighter/lighter", "api_url": "https://rseng.github.io/software/api/repos/github/project-lighter/lighter"}, {"uid": "github/unfoldtoolbox/UnfoldSim.jl", "html_url": "https://rseng.github.io/software/repository/github/unfoldtoolbox/UnfoldSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/unfoldtoolbox/UnfoldSim.jl"}, {"uid": "github/takfung/ResDisMapper", "html_url": "https://rseng.github.io/software/repository/github/takfung/ResDisMapper", "api_url": "https://rseng.github.io/software/api/repos/github/takfung/ResDisMapper"}, {"uid": "github/Tomcxf/FASTdRNA", "html_url": "https://rseng.github.io/software/repository/github/Tomcxf/FASTdRNA", "api_url": "https://rseng.github.io/software/api/repos/github/Tomcxf/FASTdRNA"}, {"uid": "github/dondi/GRNsight", "html_url": "https://rseng.github.io/software/repository/github/dondi/GRNsight", "api_url": "https://rseng.github.io/software/api/repos/github/dondi/GRNsight"}, {"uid": "github/deepmodeling/DMFF", "html_url": "https://rseng.github.io/software/repository/github/deepmodeling/DMFF", "api_url": "https://rseng.github.io/software/api/repos/github/deepmodeling/DMFF"}, {"uid": "github/HLasse/TextDescriptives", "html_url": "https://rseng.github.io/software/repository/github/HLasse/TextDescriptives", "api_url": "https://rseng.github.io/software/api/repos/github/HLasse/TextDescriptives"}, {"uid": "github/gourabghoshroy/MPVNN", "html_url": "https://rseng.github.io/software/repository/github/gourabghoshroy/MPVNN", "api_url": "https://rseng.github.io/software/api/repos/github/gourabghoshroy/MPVNN"}, {"uid": "github/rossjturner/RAiSERed", "html_url": "https://rseng.github.io/software/repository/github/rossjturner/RAiSERed", "api_url": "https://rseng.github.io/software/api/repos/github/rossjturner/RAiSERed"}, {"uid": "github/yanrong-stacy-song/creditr", "html_url": "https://rseng.github.io/software/repository/github/yanrong-stacy-song/creditr", "api_url": "https://rseng.github.io/software/api/repos/github/yanrong-stacy-song/creditr"}, {"uid": "github/EMBL-Hentze-group/htseq-clip", "html_url": "https://rseng.github.io/software/repository/github/EMBL-Hentze-group/htseq-clip", "api_url": "https://rseng.github.io/software/api/repos/github/EMBL-Hentze-group/htseq-clip"}, {"uid": "github/yangyanli/DO-Conv", "html_url": "https://rseng.github.io/software/repository/github/yangyanli/DO-Conv", "api_url": "https://rseng.github.io/software/api/repos/github/yangyanli/DO-Conv"}, {"uid": "github/Substra/substra", "html_url": "https://rseng.github.io/software/repository/github/Substra/substra", "api_url": "https://rseng.github.io/software/api/repos/github/Substra/substra"}, {"uid": "github/rikenbit/iTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/iTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/iTensor"}, {"uid": "github/rikenbit/OnlineNMF.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlineNMF.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlineNMF.jl"}, {"uid": "github/rikenbit/nnTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/nnTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/nnTensor"}, {"uid": "github/rikenbit/OnlinePCA.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlinePCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlinePCA.jl"}, {"uid": "github/rikenbit/dcTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/dcTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/dcTensor"}, {"uid": "github/shinichiroando/sashimi-w", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-w", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-w"}, {"uid": "github/shinichiroando/sashimi-c", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-c", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-c"}, {"uid": "github/spglib/spgrep", "html_url": "https://rseng.github.io/software/repository/github/spglib/spgrep", "api_url": "https://rseng.github.io/software/api/repos/github/spglib/spgrep"}, {"uid": "github/EddyRivasLab/hmmer", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/hmmer", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/hmmer"}, {"uid": "github/EddyRivasLab/infernal", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/infernal", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/infernal"}, {"uid": "github/fxwiegand/predictosaurus", "html_url": "https://rseng.github.io/software/repository/github/fxwiegand/predictosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/fxwiegand/predictosaurus"}, {"uid": "github/grant-m-s/astronomicAL", "html_url": "https://rseng.github.io/software/repository/github/grant-m-s/astronomicAL", "api_url": "https://rseng.github.io/software/api/repos/github/grant-m-s/astronomicAL"}, {"uid": "github/hpc4cmb/toast", "html_url": "https://rseng.github.io/software/repository/github/hpc4cmb/toast", "api_url": "https://rseng.github.io/software/api/repos/github/hpc4cmb/toast"}, {"uid": "github/research-software-directory/research-software-directory", "html_url": "https://rseng.github.io/software/repository/github/research-software-directory/research-software-directory", "api_url": "https://rseng.github.io/software/api/repos/github/research-software-directory/research-software-directory"}, {"uid": "github/sachsmc/cosinor", "html_url": "https://rseng.github.io/software/repository/github/sachsmc/cosinor", "api_url": "https://rseng.github.io/software/api/repos/github/sachsmc/cosinor"}, {"uid": "github/SeaIce-Math/SubZero", "html_url": "https://rseng.github.io/software/repository/github/SeaIce-Math/SubZero", "api_url": "https://rseng.github.io/software/api/repos/github/SeaIce-Math/SubZero"}, {"uid": "github/CosmoLike/CosmoCov", "html_url": "https://rseng.github.io/software/repository/github/CosmoLike/CosmoCov", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoLike/CosmoCov"}, {"uid": "github/Dfupa/meTAline", "html_url": "https://rseng.github.io/software/repository/github/Dfupa/meTAline", "api_url": "https://rseng.github.io/software/api/repos/github/Dfupa/meTAline"}, {"uid": "github/jenniferlu717/Bracken", "html_url": "https://rseng.github.io/software/repository/github/jenniferlu717/Bracken", "api_url": "https://rseng.github.io/software/api/repos/github/jenniferlu717/Bracken"}, {"uid": "github/SkywalkerLuke/TransHLA", "html_url": "https://rseng.github.io/software/repository/github/SkywalkerLuke/TransHLA", "api_url": "https://rseng.github.io/software/api/repos/github/SkywalkerLuke/TransHLA"}, {"uid": "github/younglab/origami", "html_url": "https://rseng.github.io/software/repository/github/younglab/origami", "api_url": "https://rseng.github.io/software/api/repos/github/younglab/origami"}, {"uid": "github/cbml-forth/eucaim_wizard_tool", "html_url": "https://rseng.github.io/software/repository/github/cbml-forth/eucaim_wizard_tool", "api_url": "https://rseng.github.io/software/api/repos/github/cbml-forth/eucaim_wizard_tool"}, {"uid": "github/shenlab-sinai/ngsplot", "html_url": "https://rseng.github.io/software/repository/github/shenlab-sinai/ngsplot", "api_url": "https://rseng.github.io/software/api/repos/github/shenlab-sinai/ngsplot"}, {"uid": "github/ngbusca/QuasarNET", "html_url": "https://rseng.github.io/software/repository/github/ngbusca/QuasarNET", "api_url": "https://rseng.github.io/software/api/repos/github/ngbusca/QuasarNET"}, {"uid": "github/MetaCell/scicrunch-antibody-registry", "html_url": "https://rseng.github.io/software/repository/github/MetaCell/scicrunch-antibody-registry", "api_url": "https://rseng.github.io/software/api/repos/github/MetaCell/scicrunch-antibody-registry"}, {"uid": "github/ratschlab/metagraph", "html_url": "https://rseng.github.io/software/repository/github/ratschlab/metagraph", "api_url": "https://rseng.github.io/software/api/repos/github/ratschlab/metagraph"}, {"uid": "github/xiaochuanle/MECAT2", "html_url": "https://rseng.github.io/software/repository/github/xiaochuanle/MECAT2", "api_url": "https://rseng.github.io/software/api/repos/github/xiaochuanle/MECAT2"}, {"uid": "github/Music-and-Culture-Technology-Lab/omnizart", "html_url": "https://rseng.github.io/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", "api_url": "https://rseng.github.io/software/api/repos/github/Music-and-Culture-Technology-Lab/omnizart"}, {"uid": "github/brettc/partitionfinder", "html_url": "https://rseng.github.io/software/repository/github/brettc/partitionfinder", "api_url": "https://rseng.github.io/software/api/repos/github/brettc/partitionfinder"}, {"uid": "github/inrae/RCaNmodel", "html_url": "https://rseng.github.io/software/repository/github/inrae/RCaNmodel", "api_url": "https://rseng.github.io/software/api/repos/github/inrae/RCaNmodel"}, {"uid": "github/LTLA/basilisk", "html_url": "https://rseng.github.io/software/repository/github/LTLA/basilisk", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/basilisk"}, {"uid": "github/LTLA/gesel.js", "html_url": "https://rseng.github.io/software/repository/github/LTLA/gesel.js", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/gesel.js"}, {"uid": "github/soichiro-hattori/unpopular", "html_url": "https://rseng.github.io/software/repository/github/soichiro-hattori/unpopular", "api_url": "https://rseng.github.io/software/api/repos/github/soichiro-hattori/unpopular"}, {"uid": "github/uw-ipd/RoseTTAFold2", "html_url": "https://rseng.github.io/software/repository/github/uw-ipd/RoseTTAFold2", "api_url": "https://rseng.github.io/software/api/repos/github/uw-ipd/RoseTTAFold2"}, {"uid": "github/ropensci-archive/monkeylearn", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/monkeylearn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/monkeylearn"}, {"uid": "github/ropensci-archive/arresteddev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/arresteddev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/arresteddev"}, {"uid": "github/ropensci-archive/rodev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/rodev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/rodev"}, {"uid": "github/ropensci-archive/reviewer", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/reviewer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/reviewer"}, {"uid": "github/pyvisa/pyvisa", "html_url": "https://rseng.github.io/software/repository/github/pyvisa/pyvisa", "api_url": "https://rseng.github.io/software/api/repos/github/pyvisa/pyvisa"}, {"uid": "github/tudelft3d/3dfier", "html_url": "https://rseng.github.io/software/repository/github/tudelft3d/3dfier", "api_url": "https://rseng.github.io/software/api/repos/github/tudelft3d/3dfier"}, {"uid": "github/phelelani/nf-rnaSeqMetagen", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqMetagen", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqMetagen"}, {"uid": "github/phelelani/nf-rnaSeqCount", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqCount", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqCount"}, {"uid": "github/tikk3r/lofar-h5plot", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/lofar-h5plot", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/lofar-h5plot"}, {"uid": "github/tikk3r/legacystamps", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/legacystamps", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/legacystamps"}, {"uid": "github/snystrom/memes", "html_url": "https://rseng.github.io/software/repository/github/snystrom/memes", "api_url": "https://rseng.github.io/software/api/repos/github/snystrom/memes"}, {"uid": "github/SALT-NIRWALS/nirwals", "html_url": "https://rseng.github.io/software/repository/github/SALT-NIRWALS/nirwals", "api_url": "https://rseng.github.io/software/api/repos/github/SALT-NIRWALS/nirwals"}, {"uid": "github/metabolomicsworkbench/MetGENE", "html_url": "https://rseng.github.io/software/repository/github/metabolomicsworkbench/MetGENE", "api_url": "https://rseng.github.io/software/api/repos/github/metabolomicsworkbench/MetGENE"}, {"uid": "github/gorpipe/gor", "html_url": "https://rseng.github.io/software/repository/github/gorpipe/gor", "api_url": "https://rseng.github.io/software/api/repos/github/gorpipe/gor"}, {"uid": "github/max0x7ba/atomic_queue", "html_url": "https://rseng.github.io/software/repository/github/max0x7ba/atomic_queue", "api_url": "https://rseng.github.io/software/api/repos/github/max0x7ba/atomic_queue"}, {"uid": "github/silburt/DeepMoon", "html_url": "https://rseng.github.io/software/repository/github/silburt/DeepMoon", "api_url": "https://rseng.github.io/software/api/repos/github/silburt/DeepMoon"}, {"uid": "github/aineniamh/squirrel", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/squirrel", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/squirrel"}, {"uid": "github/aineniamh/snipit", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/snipit", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/snipit"}, {"uid": "github/xraypy/xraylarch", "html_url": "https://rseng.github.io/software/repository/github/xraypy/xraylarch", "api_url": "https://rseng.github.io/software/api/repos/github/xraypy/xraylarch"}, {"uid": "github/dgarrimar/sqtlseeker2-nf", "html_url": "https://rseng.github.io/software/repository/github/dgarrimar/sqtlseeker2-nf", "api_url": "https://rseng.github.io/software/api/repos/github/dgarrimar/sqtlseeker2-nf"}, {"uid": "github/t00shadow/CryoDataBot", "html_url": "https://rseng.github.io/software/repository/github/t00shadow/CryoDataBot", "api_url": "https://rseng.github.io/software/api/repos/github/t00shadow/CryoDataBot"}, {"uid": "github/RosettaCommons/RoseTTAFold", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RoseTTAFold", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RoseTTAFold"}, {"uid": "github/RosettaCommons/RFDesign", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RFDesign", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RFDesign"}, {"uid": "github/CaymanUnterborn/ExoPlex", "html_url": "https://rseng.github.io/software/repository/github/CaymanUnterborn/ExoPlex", "api_url": "https://rseng.github.io/software/api/repos/github/CaymanUnterborn/ExoPlex"}, {"uid": "github/gear-genomics/dicey", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/dicey", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/dicey"}, {"uid": "github/gear-genomics/tracy", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/tracy", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/tracy"}, {"uid": "github/heuermh/dishevelled-bio", "html_url": "https://rseng.github.io/software/repository/github/heuermh/dishevelled-bio", "api_url": "https://rseng.github.io/software/api/repos/github/heuermh/dishevelled-bio"}, {"uid": "github/rcsb/mmtf-python", "html_url": "https://rseng.github.io/software/repository/github/rcsb/mmtf-python", "api_url": "https://rseng.github.io/software/api/repos/github/rcsb/mmtf-python"}, {"uid": "github/iterize/tenta", "html_url": "https://rseng.github.io/software/repository/github/iterize/tenta", "api_url": "https://rseng.github.io/software/api/repos/github/iterize/tenta"}, {"uid": "github/anddssan/CLOUDe", "html_url": "https://rseng.github.io/software/repository/github/anddssan/CLOUDe", "api_url": "https://rseng.github.io/software/api/repos/github/anddssan/CLOUDe"}, {"uid": "github/TinkerTools/Tinker-HP", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/Tinker-HP", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/Tinker-HP"}, {"uid": "github/TinkerTools/tinker9", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/tinker9", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/tinker9"}, {"uid": "github/samsledje/ConPLex_dev", "html_url": "https://rseng.github.io/software/repository/github/samsledje/ConPLex_dev", "api_url": "https://rseng.github.io/software/api/repos/github/samsledje/ConPLex_dev"}, {"uid": "github/ziyewang/ARG_SHINE", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/ARG_SHINE", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/ARG_SHINE"}, {"uid": "github/ziyewang/MetaBinner", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/MetaBinner", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/MetaBinner"}, {"uid": "github/nlesc-dirac/sagecal", "html_url": "https://rseng.github.io/software/repository/github/nlesc-dirac/sagecal", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-dirac/sagecal"}, {"uid": "github/milicolazo/Pyedra", "html_url": "https://rseng.github.io/software/repository/github/milicolazo/Pyedra", "api_url": "https://rseng.github.io/software/api/repos/github/milicolazo/Pyedra"}, {"uid": "github/SJLeo/FFSD", "html_url": "https://rseng.github.io/software/repository/github/SJLeo/FFSD", "api_url": "https://rseng.github.io/software/api/repos/github/SJLeo/FFSD"}, {"uid": "github/LalResearchGroup/CNV-clinviewer", "html_url": "https://rseng.github.io/software/repository/github/LalResearchGroup/CNV-clinviewer", "api_url": "https://rseng.github.io/software/api/repos/github/LalResearchGroup/CNV-clinviewer"}, {"uid": "github/arabic-digital-humanities/adhtools", "html_url": "https://rseng.github.io/software/repository/github/arabic-digital-humanities/adhtools", "api_url": "https://rseng.github.io/software/api/repos/github/arabic-digital-humanities/adhtools"}, {"uid": "github/pixixiaonaogou/MLSDR", "html_url": "https://rseng.github.io/software/repository/github/pixixiaonaogou/MLSDR", "api_url": "https://rseng.github.io/software/api/repos/github/pixixiaonaogou/MLSDR"}, {"uid": "github/omuse-geoscience/omuse", "html_url": "https://rseng.github.io/software/repository/github/omuse-geoscience/omuse", "api_url": "https://rseng.github.io/software/api/repos/github/omuse-geoscience/omuse"}, {"uid": "github/Yingjie4Science/SDGdetector", "html_url": "https://rseng.github.io/software/repository/github/Yingjie4Science/SDGdetector", "api_url": "https://rseng.github.io/software/api/repos/github/Yingjie4Science/SDGdetector"}, {"uid": "github/HalHaggard/EARL", "html_url": "https://rseng.github.io/software/repository/github/HalHaggard/EARL", "api_url": "https://rseng.github.io/software/api/repos/github/HalHaggard/EARL"}, {"uid": "github/IPK-BIT/divbrowse", "html_url": "https://rseng.github.io/software/repository/github/IPK-BIT/divbrowse", "api_url": "https://rseng.github.io/software/api/repos/github/IPK-BIT/divbrowse"}, {"uid": "github/LiShuTJ/NDNet", "html_url": "https://rseng.github.io/software/repository/github/LiShuTJ/NDNet", "api_url": "https://rseng.github.io/software/api/repos/github/LiShuTJ/NDNet"}, {"uid": "github/hartwigmedical/hmftools", "html_url": "https://rseng.github.io/software/repository/github/hartwigmedical/hmftools", "api_url": "https://rseng.github.io/software/api/repos/github/hartwigmedical/hmftools"}, {"uid": "github/thomasdenecker/START-R", "html_url": "https://rseng.github.io/software/repository/github/thomasdenecker/START-R", "api_url": "https://rseng.github.io/software/api/repos/github/thomasdenecker/START-R"}, {"uid": "github/chenjj2/forecaster", "html_url": "https://rseng.github.io/software/repository/github/chenjj2/forecaster", "api_url": "https://rseng.github.io/software/api/repos/github/chenjj2/forecaster"}, {"uid": "github/jfmrod/MAPseq", "html_url": "https://rseng.github.io/software/repository/github/jfmrod/MAPseq", "api_url": "https://rseng.github.io/software/api/repos/github/jfmrod/MAPseq"}, {"uid": "github/wordsworthgroup/mars_redox_2021", "html_url": "https://rseng.github.io/software/repository/github/wordsworthgroup/mars_redox_2021", "api_url": "https://rseng.github.io/software/api/repos/github/wordsworthgroup/mars_redox_2021"}, {"uid": "github/pyFFTW/pyFFTW", "html_url": "https://rseng.github.io/software/repository/github/pyFFTW/pyFFTW", "api_url": "https://rseng.github.io/software/api/repos/github/pyFFTW/pyFFTW"}, {"uid": "github/jradcliffe5/multi_self_cal", "html_url": "https://rseng.github.io/software/repository/github/jradcliffe5/multi_self_cal", "api_url": "https://rseng.github.io/software/api/repos/github/jradcliffe5/multi_self_cal"}, {"uid": "github/pedronachtigall/ToxCodAn-Genome", "html_url": "https://rseng.github.io/software/repository/github/pedronachtigall/ToxCodAn-Genome", "api_url": "https://rseng.github.io/software/api/repos/github/pedronachtigall/ToxCodAn-Genome"}, {"uid": "github/RECETOX/recetox-xMSannotator", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-xMSannotator", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-xMSannotator"}, {"uid": "github/RECETOX/wtv", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/wtv", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/wtv"}, {"uid": "github/RECETOX/recetox-msfinder", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-msfinder", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-msfinder"}, {"uid": "github/RECETOX/MSMetaEnhancer", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/MSMetaEnhancer", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/MSMetaEnhancer"}, {"uid": "github/RECETOX/recetox-aplcms", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-aplcms", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-aplcms"}, {"uid": "github/RECETOX/RIAssigner", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/RIAssigner", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/RIAssigner"}, {"uid": "github/jellis18/PTMCMCSampler", "html_url": "https://rseng.github.io/software/repository/github/jellis18/PTMCMCSampler", "api_url": "https://rseng.github.io/software/api/repos/github/jellis18/PTMCMCSampler"}, {"uid": "github/antoinediez/Sisyphe", "html_url": "https://rseng.github.io/software/repository/github/antoinediez/Sisyphe", "api_url": "https://rseng.github.io/software/api/repos/github/antoinediez/Sisyphe"}, {"uid": "github/COVID-IWG/epimargin", "html_url": "https://rseng.github.io/software/repository/github/COVID-IWG/epimargin", "api_url": "https://rseng.github.io/software/api/repos/github/COVID-IWG/epimargin"}, {"uid": "github/philip-long/constrained_manipulability", "html_url": "https://rseng.github.io/software/repository/github/philip-long/constrained_manipulability", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/constrained_manipulability"}, {"uid": "github/philip-long/robot_collision_checking", "html_url": "https://rseng.github.io/software/repository/github/philip-long/robot_collision_checking", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/robot_collision_checking"}, {"uid": "github/SevgiAkten/pycellga", "html_url": "https://rseng.github.io/software/repository/github/SevgiAkten/pycellga", "api_url": "https://rseng.github.io/software/api/repos/github/SevgiAkten/pycellga"}, {"uid": "github/seung-lab/FlyWirePaper", "html_url": "https://rseng.github.io/software/repository/github/seung-lab/FlyWirePaper", "api_url": "https://rseng.github.io/software/api/repos/github/seung-lab/FlyWirePaper"}, {"uid": "github/Schulik/aiolos", "html_url": "https://rseng.github.io/software/repository/github/Schulik/aiolos", "api_url": "https://rseng.github.io/software/api/repos/github/Schulik/aiolos"}, {"uid": "github/ryanhausen/fitsmap", "html_url": "https://rseng.github.io/software/repository/github/ryanhausen/fitsmap", "api_url": "https://rseng.github.io/software/api/repos/github/ryanhausen/fitsmap"}, {"uid": "github/bsafdi/stellarWakes", "html_url": "https://rseng.github.io/software/repository/github/bsafdi/stellarWakes", "api_url": "https://rseng.github.io/software/api/repos/github/bsafdi/stellarWakes"}, {"uid": "github/akinremisa/rfsed", "html_url": "https://rseng.github.io/software/repository/github/akinremisa/rfsed", "api_url": "https://rseng.github.io/software/api/repos/github/akinremisa/rfsed"}, {"uid": "github/TianlaiProject/tlpipe", "html_url": "https://rseng.github.io/software/repository/github/TianlaiProject/tlpipe", "api_url": "https://rseng.github.io/software/api/repos/github/TianlaiProject/tlpipe"}, {"uid": "github/cosmoinin/MGPT", "html_url": "https://rseng.github.io/software/repository/github/cosmoinin/MGPT", "api_url": "https://rseng.github.io/software/api/repos/github/cosmoinin/MGPT"}, {"uid": "github/nivha/three_body_integration", "html_url": "https://rseng.github.io/software/repository/github/nivha/three_body_integration", "api_url": "https://rseng.github.io/software/api/repos/github/nivha/three_body_integration"}, {"uid": "github/devries/analytic_infall", "html_url": "https://rseng.github.io/software/repository/github/devries/analytic_infall", "api_url": "https://rseng.github.io/software/api/repos/github/devries/analytic_infall"}, {"uid": "github/icrar/daliuge", "html_url": "https://rseng.github.io/software/repository/github/icrar/daliuge", "api_url": "https://rseng.github.io/software/api/repos/github/icrar/daliuge"}, {"uid": "github/spm/spm", "html_url": "https://rseng.github.io/software/repository/github/spm/spm", "api_url": "https://rseng.github.io/software/api/repos/github/spm/spm"}, {"uid": "github/user29A/fastrometry", "html_url": "https://rseng.github.io/software/repository/github/user29A/fastrometry", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/fastrometry"}, {"uid": "github/user29A/CCDLAB", "html_url": "https://rseng.github.io/software/repository/github/user29A/CCDLAB", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/CCDLAB"}, {"uid": "github/user29A/JPFITS", "html_url": "https://rseng.github.io/software/repository/github/user29A/JPFITS", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/JPFITS"}, {"uid": "github/korcsmarosgroup/CytokineLink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/CytokineLink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/CytokineLink"}, {"uid": "github/korcsmarosgroup/TFlink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/TFlink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/TFlink"}, {"uid": "github/uedaLabR/nanoDoc", "html_url": "https://rseng.github.io/software/repository/github/uedaLabR/nanoDoc", "api_url": "https://rseng.github.io/software/api/repos/github/uedaLabR/nanoDoc"}, {"uid": "github/samaygarg/fuelcell", "html_url": "https://rseng.github.io/software/repository/github/samaygarg/fuelcell", "api_url": "https://rseng.github.io/software/api/repos/github/samaygarg/fuelcell"}, {"uid": "github/roban/CosmoloPy", "html_url": "https://rseng.github.io/software/repository/github/roban/CosmoloPy", "api_url": "https://rseng.github.io/software/api/repos/github/roban/CosmoloPy"}, {"uid": "github/danielenricocahall/elephas", "html_url": "https://rseng.github.io/software/repository/github/danielenricocahall/elephas", "api_url": "https://rseng.github.io/software/api/repos/github/danielenricocahall/elephas"}, {"uid": "github/andrew-saydjari/CloudCovErr.jl", "html_url": "https://rseng.github.io/software/repository/github/andrew-saydjari/CloudCovErr.jl", "api_url": "https://rseng.github.io/software/api/repos/github/andrew-saydjari/CloudCovErr.jl"}, {"uid": "github/JakobBD/pounce", "html_url": "https://rseng.github.io/software/repository/github/JakobBD/pounce", "api_url": "https://rseng.github.io/software/api/repos/github/JakobBD/pounce"}, {"uid": "github/hanyk/BayeSED3", "html_url": "https://rseng.github.io/software/repository/github/hanyk/BayeSED3", "api_url": "https://rseng.github.io/software/api/repos/github/hanyk/BayeSED3"}, {"uid": "github/andizq/sf3dmodels", "html_url": "https://rseng.github.io/software/repository/github/andizq/sf3dmodels", "api_url": "https://rseng.github.io/software/api/repos/github/andizq/sf3dmodels"}, {"uid": "github/nkhorshid/simab", "html_url": "https://rseng.github.io/software/repository/github/nkhorshid/simab", "api_url": "https://rseng.github.io/software/api/repos/github/nkhorshid/simab"}, {"uid": "github/RelNucAs/bns_nurates", "html_url": "https://rseng.github.io/software/repository/github/RelNucAs/bns_nurates", "api_url": "https://rseng.github.io/software/api/repos/github/RelNucAs/bns_nurates"}, {"uid": "github/nickhand/pyRSD", "html_url": "https://rseng.github.io/software/repository/github/nickhand/pyRSD", "api_url": "https://rseng.github.io/software/api/repos/github/nickhand/pyRSD"}, {"uid": "github/PIK-LPJmL/lpjmlkit", "html_url": "https://rseng.github.io/software/repository/github/PIK-LPJmL/lpjmlkit", "api_url": "https://rseng.github.io/software/api/repos/github/PIK-LPJmL/lpjmlkit"}, {"uid": "github/vrodgom/statmorph", "html_url": "https://rseng.github.io/software/repository/github/vrodgom/statmorph", "api_url": "https://rseng.github.io/software/api/repos/github/vrodgom/statmorph"}, {"uid": "github/phillippro/pexo", "html_url": "https://rseng.github.io/software/repository/github/phillippro/pexo", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/pexo"}, {"uid": "github/phillippro/agatha", "html_url": "https://rseng.github.io/software/repository/github/phillippro/agatha", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/agatha"}, {"uid": "github/dtamayo/reboundx", "html_url": "https://rseng.github.io/software/repository/github/dtamayo/reboundx", "api_url": "https://rseng.github.io/software/api/repos/github/dtamayo/reboundx"}, {"uid": "github/stan-dev/stan", "html_url": "https://rseng.github.io/software/repository/github/stan-dev/stan", "api_url": "https://rseng.github.io/software/api/repos/github/stan-dev/stan"}, {"uid": "github/benallard/galileo", "html_url": "https://rseng.github.io/software/repository/github/benallard/galileo", "api_url": "https://rseng.github.io/software/api/repos/github/benallard/galileo"}, {"uid": "github/dspelaez/extended-wdm", "html_url": "https://rseng.github.io/software/repository/github/dspelaez/extended-wdm", "api_url": "https://rseng.github.io/software/api/repos/github/dspelaez/extended-wdm"}, {"uid": "github/edbiomedai/scmorph", "html_url": "https://rseng.github.io/software/repository/github/edbiomedai/scmorph", "api_url": "https://rseng.github.io/software/api/repos/github/edbiomedai/scmorph"}, {"uid": "github/ouyang-lab/PRAS", "html_url": "https://rseng.github.io/software/repository/github/ouyang-lab/PRAS", "api_url": "https://rseng.github.io/software/api/repos/github/ouyang-lab/PRAS"}, {"uid": "github/egstrom/cluster-in-a-box", "html_url": "https://rseng.github.io/software/repository/github/egstrom/cluster-in-a-box", "api_url": "https://rseng.github.io/software/api/repos/github/egstrom/cluster-in-a-box"}, {"uid": "github/Smith42/pix2prof", "html_url": "https://rseng.github.io/software/repository/github/Smith42/pix2prof", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/pix2prof"}, {"uid": "github/Smith42/astroPT", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroPT", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroPT"}, {"uid": "github/Smith42/astroddpm", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroddpm", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroddpm"}, {"uid": "github/Smith42/XDF-GAN", "html_url": "https://rseng.github.io/software/repository/github/Smith42/XDF-GAN", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/XDF-GAN"}, {"uid": "github/cmzmasek/forester", "html_url": "https://rseng.github.io/software/repository/github/cmzmasek/forester", "api_url": "https://rseng.github.io/software/api/repos/github/cmzmasek/forester"}, {"uid": "github/arviz-devs/preliz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/preliz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/preliz"}, {"uid": "github/arviz-devs/arviz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/arviz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/arviz"}, {"uid": "github/Gabaldonlab/jloh", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/jloh", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/jloh"}, {"uid": "github/Gabaldonlab/perSVade", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/perSVade", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/perSVade"}, {"uid": "github/Gabaldonlab/crossmapper", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/crossmapper", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/crossmapper"}, {"uid": "github/Gabaldonlab/karyon", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/karyon", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/karyon"}, {"uid": "github/supsi-dacd-isaac/BayesReconPy", "html_url": "https://rseng.github.io/software/repository/github/supsi-dacd-isaac/BayesReconPy", "api_url": "https://rseng.github.io/software/api/repos/github/supsi-dacd-isaac/BayesReconPy"}, {"uid": "github/richteague/gofish", "html_url": "https://rseng.github.io/software/repository/github/richteague/gofish", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/gofish"}, {"uid": "github/richteague/disksurf", "html_url": "https://rseng.github.io/software/repository/github/richteague/disksurf", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/disksurf"}, {"uid": "github/richteague/bettermoments", "html_url": "https://rseng.github.io/software/repository/github/richteague/bettermoments", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/bettermoments"}, {"uid": "github/richteague/eddy", "html_url": "https://rseng.github.io/software/repository/github/richteague/eddy", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/eddy"}, {"uid": "github/ClapeyronThermo/GCIdentifier.jl", "html_url": "https://rseng.github.io/software/repository/github/ClapeyronThermo/GCIdentifier.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ClapeyronThermo/GCIdentifier.jl"}, {"uid": "github/KALMUS-Color-Toolkit/KALMUS", "html_url": "https://rseng.github.io/software/repository/github/KALMUS-Color-Toolkit/KALMUS", "api_url": "https://rseng.github.io/software/api/repos/github/KALMUS-Color-Toolkit/KALMUS"}, {"uid": "github/jlustigy/coronagraph", "html_url": "https://rseng.github.io/software/repository/github/jlustigy/coronagraph", "api_url": "https://rseng.github.io/software/api/repos/github/jlustigy/coronagraph"}, {"uid": "github/reznik-lab/MIRTH", "html_url": "https://rseng.github.io/software/repository/github/reznik-lab/MIRTH", "api_url": "https://rseng.github.io/software/api/repos/github/reznik-lab/MIRTH"}, {"uid": "github/davidpamos/MultiModes", "html_url": "https://rseng.github.io/software/repository/github/davidpamos/MultiModes", "api_url": "https://rseng.github.io/software/api/repos/github/davidpamos/MultiModes"}, {"uid": "github/nrao/UniPOPS", "html_url": "https://rseng.github.io/software/repository/github/nrao/UniPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/nrao/UniPOPS"}, {"uid": "github/esperlman/JetCurry", "html_url": "https://rseng.github.io/software/repository/github/esperlman/JetCurry", "api_url": "https://rseng.github.io/software/api/repos/github/esperlman/JetCurry"}, {"uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", "html_url": "https://rseng.github.io/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", "api_url": "https://rseng.github.io/software/api/repos/github/BDI-pathogens/OpenABM-Covid19-model-paper"}, {"uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "html_url": "https://rseng.github.io/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/leonidprinceton/LightweightSpaceCoronagraphSimulator"}, {"uid": "github/ctian282/DeepSSM", "html_url": "https://rseng.github.io/software/repository/github/ctian282/DeepSSM", "api_url": "https://rseng.github.io/software/api/repos/github/ctian282/DeepSSM"}, {"uid": "github/davidhoksza/traveler", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/traveler", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/traveler"}, {"uid": "github/davidhoksza/MolArt", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/MolArt", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/MolArt"}, {"uid": "github/neuroneural/brainchop", "html_url": "https://rseng.github.io/software/repository/github/neuroneural/brainchop", "api_url": "https://rseng.github.io/software/api/repos/github/neuroneural/brainchop"}, {"uid": "github/evanhockings/QuantumACES.jl", "html_url": "https://rseng.github.io/software/repository/github/evanhockings/QuantumACES.jl", "api_url": "https://rseng.github.io/software/api/repos/github/evanhockings/QuantumACES.jl"}, {"uid": "github/bshoshany/OGRe", "html_url": "https://rseng.github.io/software/repository/github/bshoshany/OGRe", "api_url": "https://rseng.github.io/software/api/repos/github/bshoshany/OGRe"}, {"uid": "github/jfarek/xatlas", "html_url": "https://rseng.github.io/software/repository/github/jfarek/xatlas", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/xatlas"}, {"uid": "github/jfarek/alignstats", "html_url": "https://rseng.github.io/software/repository/github/jfarek/alignstats", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/alignstats"}, {"uid": "github/etal/cnvkit", "html_url": "https://rseng.github.io/software/repository/github/etal/cnvkit", "api_url": "https://rseng.github.io/software/api/repos/github/etal/cnvkit"}, {"uid": "github/LiberTEM/LiberTEM", "html_url": "https://rseng.github.io/software/repository/github/LiberTEM/LiberTEM", "api_url": "https://rseng.github.io/software/api/repos/github/LiberTEM/LiberTEM"}, {"uid": "github/iancze/PSOAP", "html_url": "https://rseng.github.io/software/repository/github/iancze/PSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/PSOAP"}, {"uid": "github/iancze/DiskJockey", "html_url": "https://rseng.github.io/software/repository/github/iancze/DiskJockey", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/DiskJockey"}, {"uid": "github/kwkx/IPRP", "html_url": "https://rseng.github.io/software/repository/github/kwkx/IPRP", "api_url": "https://rseng.github.io/software/api/repos/github/kwkx/IPRP"}, {"uid": "github/aschafu/PSSH2", "html_url": "https://rseng.github.io/software/repository/github/aschafu/PSSH2", "api_url": "https://rseng.github.io/software/api/repos/github/aschafu/PSSH2"}, {"uid": "github/VALENCE-software/VALENCE", "html_url": "https://rseng.github.io/software/repository/github/VALENCE-software/VALENCE", "api_url": "https://rseng.github.io/software/api/repos/github/VALENCE-software/VALENCE"}, {"uid": "github/ToyotaCRDL/mahos", "html_url": "https://rseng.github.io/software/repository/github/ToyotaCRDL/mahos", "api_url": "https://rseng.github.io/software/api/repos/github/ToyotaCRDL/mahos"}, {"uid": "github/csdms/bmi", "html_url": "https://rseng.github.io/software/repository/github/csdms/bmi", "api_url": "https://rseng.github.io/software/api/repos/github/csdms/bmi"}, {"uid": "github/dankelley/oce", "html_url": "https://rseng.github.io/software/repository/github/dankelley/oce", "api_url": "https://rseng.github.io/software/api/repos/github/dankelley/oce"}, {"uid": "github/mmann1123/xr_fresh", "html_url": "https://rseng.github.io/software/repository/github/mmann1123/xr_fresh", "api_url": "https://rseng.github.io/software/api/repos/github/mmann1123/xr_fresh"}, {"uid": "github/JSB-UCLA/scPNMF", "html_url": "https://rseng.github.io/software/repository/github/JSB-UCLA/scPNMF", "api_url": "https://rseng.github.io/software/api/repos/github/JSB-UCLA/scPNMF"}, {"uid": "github/nikhilroxtomar/FANet", "html_url": "https://rseng.github.io/software/repository/github/nikhilroxtomar/FANet", "api_url": "https://rseng.github.io/software/api/repos/github/nikhilroxtomar/FANet"}, {"uid": "github/hues-platform/cesar-p-core", "html_url": "https://rseng.github.io/software/repository/github/hues-platform/cesar-p-core", "api_url": "https://rseng.github.io/software/api/repos/github/hues-platform/cesar-p-core"}, {"uid": "github/volkamerlab/opencadd", "html_url": "https://rseng.github.io/software/repository/github/volkamerlab/opencadd", "api_url": "https://rseng.github.io/software/api/repos/github/volkamerlab/opencadd"}, {"uid": "github/li-shaochuan/SEDIM", "html_url": "https://rseng.github.io/software/repository/github/li-shaochuan/SEDIM", "api_url": "https://rseng.github.io/software/api/repos/github/li-shaochuan/SEDIM"}, {"uid": "github/D-Crake/HEADSS", "html_url": "https://rseng.github.io/software/repository/github/D-Crake/HEADSS", "api_url": "https://rseng.github.io/software/api/repos/github/D-Crake/HEADSS"}, {"uid": "github/4DModeller/fdmr", "html_url": "https://rseng.github.io/software/repository/github/4DModeller/fdmr", "api_url": "https://rseng.github.io/software/api/repos/github/4DModeller/fdmr"}, {"uid": "github/malonge/RagTag", "html_url": "https://rseng.github.io/software/repository/github/malonge/RagTag", "api_url": "https://rseng.github.io/software/api/repos/github/malonge/RagTag"}, {"uid": "github/Nic5472K/ScientificData2021_HealthGym", "html_url": "https://rseng.github.io/software/repository/github/Nic5472K/ScientificData2021_HealthGym", "api_url": "https://rseng.github.io/software/api/repos/github/Nic5472K/ScientificData2021_HealthGym"}, {"uid": "github/RobertHTyler/TROPF", "html_url": "https://rseng.github.io/software/repository/github/RobertHTyler/TROPF", "api_url": "https://rseng.github.io/software/api/repos/github/RobertHTyler/TROPF"}, {"uid": "github/tscnlab/LightLogR", "html_url": "https://rseng.github.io/software/repository/github/tscnlab/LightLogR", "api_url": "https://rseng.github.io/software/api/repos/github/tscnlab/LightLogR"}, {"uid": "github/SegataLab/lefse", "html_url": "https://rseng.github.io/software/repository/github/SegataLab/lefse", "api_url": "https://rseng.github.io/software/api/repos/github/SegataLab/lefse"}, {"uid": "github/HingeAssembler/HINGE", "html_url": "https://rseng.github.io/software/repository/github/HingeAssembler/HINGE", "api_url": "https://rseng.github.io/software/api/repos/github/HingeAssembler/HINGE"}, {"uid": "github/exosports/MARGE", "html_url": "https://rseng.github.io/software/repository/github/exosports/MARGE", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/MARGE"}, {"uid": "github/exosports/homer", "html_url": "https://rseng.github.io/software/repository/github/exosports/homer", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/homer"}, {"uid": "github/exosports/transit", "html_url": "https://rseng.github.io/software/repository/github/exosports/transit", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/transit"}, {"uid": "github/exosports/BART", "html_url": "https://rseng.github.io/software/repository/github/exosports/BART", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/BART"}, {"uid": "github/dftd3/simple-dftd3", "html_url": "https://rseng.github.io/software/repository/github/dftd3/simple-dftd3", "api_url": "https://rseng.github.io/software/api/repos/github/dftd3/simple-dftd3"}, {"uid": "github/BritishGeologicalSurvey/pyvolcans", "html_url": "https://rseng.github.io/software/repository/github/BritishGeologicalSurvey/pyvolcans", "api_url": "https://rseng.github.io/software/api/repos/github/BritishGeologicalSurvey/pyvolcans"}, {"uid": "github/devosoft/avida", "html_url": "https://rseng.github.io/software/repository/github/devosoft/avida", "api_url": "https://rseng.github.io/software/api/repos/github/devosoft/avida"}, {"uid": "github/mglodge/MANTA-Ray", "html_url": "https://rseng.github.io/software/repository/github/mglodge/MANTA-Ray", "api_url": "https://rseng.github.io/software/api/repos/github/mglodge/MANTA-Ray"}, {"uid": "github/juzikong/photGalIMF", "html_url": "https://rseng.github.io/software/repository/github/juzikong/photGalIMF", "api_url": "https://rseng.github.io/software/api/repos/github/juzikong/photGalIMF"}, {"uid": "github/1313e/PRISM", "html_url": "https://rseng.github.io/software/repository/github/1313e/PRISM", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/PRISM"}, {"uid": "github/1313e/CMasher", "html_url": "https://rseng.github.io/software/repository/github/1313e/CMasher", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/CMasher"}, {"uid": "github/rdicosmo/parmap", "html_url": "https://rseng.github.io/software/repository/github/rdicosmo/parmap", "api_url": "https://rseng.github.io/software/api/repos/github/rdicosmo/parmap"}, {"uid": "github/segasai/rvspecfit", "html_url": "https://rseng.github.io/software/repository/github/segasai/rvspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/rvspecfit"}, {"uid": "github/segasai/q3c", "html_url": "https://rseng.github.io/software/repository/github/segasai/q3c", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/q3c"}, {"uid": "github/captain-exoplanet/misttborn", "html_url": "https://rseng.github.io/software/repository/github/captain-exoplanet/misttborn", "api_url": "https://rseng.github.io/software/api/repos/github/captain-exoplanet/misttborn"}, {"uid": "github/Hi-COLACode/Hi-COLA", "html_url": "https://rseng.github.io/software/repository/github/Hi-COLACode/Hi-COLA", "api_url": "https://rseng.github.io/software/api/repos/github/Hi-COLACode/Hi-COLA"}, {"uid": "github/bxlab/metaWRAP", "html_url": "https://rseng.github.io/software/repository/github/bxlab/metaWRAP", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/metaWRAP"}, {"uid": "github/bxlab/bx-python", "html_url": "https://rseng.github.io/software/repository/github/bxlab/bx-python", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/bx-python"}, {"uid": "github/NCAS-CMS/cfdm", "html_url": "https://rseng.github.io/software/repository/github/NCAS-CMS/cfdm", "api_url": "https://rseng.github.io/software/api/repos/github/NCAS-CMS/cfdm"}, {"uid": "github/legolason/PyQSOFit", "html_url": "https://rseng.github.io/software/repository/github/legolason/PyQSOFit", "api_url": "https://rseng.github.io/software/api/repos/github/legolason/PyQSOFit"}, {"uid": "github/solerjuan/magnetar", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/magnetar", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/magnetar"}, {"uid": "github/solerjuan/astroHOG", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/astroHOG", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/astroHOG"}, {"uid": "github/dmey/synthia", "html_url": "https://rseng.github.io/software/repository/github/dmey/synthia", "api_url": "https://rseng.github.io/software/api/repos/github/dmey/synthia"}, {"uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", "html_url": "https://rseng.github.io/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", "api_url": "https://rseng.github.io/software/api/repos/github/earth-metabolome-initiative/earth_metabolome_ontology"}, {"uid": "github/AIgnesti/PT-REX", "html_url": "https://rseng.github.io/software/repository/github/AIgnesti/PT-REX", "api_url": "https://rseng.github.io/software/api/repos/github/AIgnesti/PT-REX"}, {"uid": "github/mmp2/megaman", "html_url": "https://rseng.github.io/software/repository/github/mmp2/megaman", "api_url": "https://rseng.github.io/software/api/repos/github/mmp2/megaman"}, {"uid": "github/pytorch/vision", "html_url": "https://rseng.github.io/software/repository/github/pytorch/vision", "api_url": "https://rseng.github.io/software/api/repos/github/pytorch/vision"}, {"uid": "github/ncbi/BAMscale", "html_url": "https://rseng.github.io/software/repository/github/ncbi/BAMscale", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/BAMscale"}, {"uid": "github/ncbi/TPMCalculator", "html_url": "https://rseng.github.io/software/repository/github/ncbi/TPMCalculator", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/TPMCalculator"}, {"uid": "github/ncbi/datasets", "html_url": "https://rseng.github.io/software/repository/github/ncbi/datasets", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/datasets"}, {"uid": "github/ncbi/SRPRISM", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SRPRISM", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SRPRISM"}, {"uid": "github/ncbi/ngs", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ngs", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ngs"}, {"uid": "github/ncbi/sra-tools", "html_url": "https://rseng.github.io/software/repository/github/ncbi/sra-tools", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/sra-tools"}, {"uid": "github/ncbi/SKESA", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SKESA", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SKESA"}, {"uid": "github/ncbi/igblast", "html_url": "https://rseng.github.io/software/repository/github/ncbi/igblast", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/igblast"}, {"uid": "github/ncbi/vadr", "html_url": "https://rseng.github.io/software/repository/github/ncbi/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/vadr"}, {"uid": "github/ncbi/ncbi-vdb", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ncbi-vdb", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ncbi-vdb"}, {"uid": "github/AstroAccelerateOrg/astro-accelerate", "html_url": "https://rseng.github.io/software/repository/github/AstroAccelerateOrg/astro-accelerate", "api_url": "https://rseng.github.io/software/api/repos/github/AstroAccelerateOrg/astro-accelerate"}, {"uid": "github/cieslar/Indri", "html_url": "https://rseng.github.io/software/repository/github/cieslar/Indri", "api_url": "https://rseng.github.io/software/api/repos/github/cieslar/Indri"}, {"uid": "github/RomainFeron/mwga-utils", "html_url": "https://rseng.github.io/software/repository/github/RomainFeron/mwga-utils", "api_url": "https://rseng.github.io/software/api/repos/github/RomainFeron/mwga-utils"}, {"uid": "github/AlexanderBartholomaeus/smORFer", "html_url": "https://rseng.github.io/software/repository/github/AlexanderBartholomaeus/smORFer", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderBartholomaeus/smORFer"}, {"uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", "html_url": "https://rseng.github.io/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/R-Vessel-X/SlicerRVXLiverSegmentation"}, {"uid": "github/davidechicco/geneExpressionFromGEO", "html_url": "https://rseng.github.io/software/repository/github/davidechicco/geneExpressionFromGEO", "api_url": "https://rseng.github.io/software/api/repos/github/davidechicco/geneExpressionFromGEO"}, {"uid": "github/equipeGST/RiboDoc", "html_url": "https://rseng.github.io/software/repository/github/equipeGST/RiboDoc", "api_url": "https://rseng.github.io/software/api/repos/github/equipeGST/RiboDoc"}, {"uid": "github/andreyshabalin/TwinEQTL", "html_url": "https://rseng.github.io/software/repository/github/andreyshabalin/TwinEQTL", "api_url": "https://rseng.github.io/software/api/repos/github/andreyshabalin/TwinEQTL"}, {"uid": "github/mtazzari/uvplot", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/uvplot", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/uvplot"}, {"uid": "github/mtazzari/galario", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/galario", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/galario"}, {"uid": "github/mtazzari/binary", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/binary", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/binary"}, {"uid": "github/Schuch666/eva3dm", "html_url": "https://rseng.github.io/software/repository/github/Schuch666/eva3dm", "api_url": "https://rseng.github.io/software/api/repos/github/Schuch666/eva3dm"}, {"uid": "github/twopin/CAMP", "html_url": "https://rseng.github.io/software/repository/github/twopin/CAMP", "api_url": "https://rseng.github.io/software/api/repos/github/twopin/CAMP"}, {"uid": "github/yrkhalil/SPIBACK", "html_url": "https://rseng.github.io/software/repository/github/yrkhalil/SPIBACK", "api_url": "https://rseng.github.io/software/api/repos/github/yrkhalil/SPIBACK"}, {"uid": "github/cas-bioinf/rboAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/cas-bioinf/rboAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/cas-bioinf/rboAnalyzer"}, {"uid": "github/sheydenreich/threepoint", "html_url": "https://rseng.github.io/software/repository/github/sheydenreich/threepoint", "api_url": "https://rseng.github.io/software/api/repos/github/sheydenreich/threepoint"}, {"uid": "github/umami-hep/salt", "html_url": "https://rseng.github.io/software/repository/github/umami-hep/salt", "api_url": "https://rseng.github.io/software/api/repos/github/umami-hep/salt"}, {"uid": "github/spack/spack", "html_url": "https://rseng.github.io/software/repository/github/spack/spack", "api_url": "https://rseng.github.io/software/api/repos/github/spack/spack"}, {"uid": "github/markfortune/luas", "html_url": "https://rseng.github.io/software/repository/github/markfortune/luas", "api_url": "https://rseng.github.io/software/api/repos/github/markfortune/luas"}, {"uid": "github/eScatter/pyelsepa", "html_url": "https://rseng.github.io/software/repository/github/eScatter/pyelsepa", "api_url": "https://rseng.github.io/software/api/repos/github/eScatter/pyelsepa"}, {"uid": "github/snakemake/snakemake", "html_url": "https://rseng.github.io/software/repository/github/snakemake/snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/snakemake/snakemake"}, {"uid": "github/JuliaManifolds/Manopt.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaManifolds/Manopt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaManifolds/Manopt.jl"}, {"uid": "github/BioMedIA/MIRTK", "html_url": "https://rseng.github.io/software/repository/github/BioMedIA/MIRTK", "api_url": "https://rseng.github.io/software/api/repos/github/BioMedIA/MIRTK"}, {"uid": "github/matsen/pplacer", "html_url": "https://rseng.github.io/software/repository/github/matsen/pplacer", "api_url": "https://rseng.github.io/software/api/repos/github/matsen/pplacer"}, {"uid": "github/ni1o1/transbigdata", "html_url": "https://rseng.github.io/software/repository/github/ni1o1/transbigdata", "api_url": "https://rseng.github.io/software/api/repos/github/ni1o1/transbigdata"}, {"uid": "github/popgenmethods/smcpp", "html_url": "https://rseng.github.io/software/repository/github/popgenmethods/smcpp", "api_url": "https://rseng.github.io/software/api/repos/github/popgenmethods/smcpp"}, {"uid": "github/tardis-sn/tardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/tardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/tardis"}, {"uid": "github/tardis-sn/carsus", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/carsus", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/carsus"}, {"uid": "github/tardis-sn/stardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/stardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/stardis"}, {"uid": "github/Guo-Jian-Wang/colfi", "html_url": "https://rseng.github.io/software/repository/github/Guo-Jian-Wang/colfi", "api_url": "https://rseng.github.io/software/api/repos/github/Guo-Jian-Wang/colfi"}, {"uid": "github/MrOlm/drep", "html_url": "https://rseng.github.io/software/repository/github/MrOlm/drep", "api_url": "https://rseng.github.io/software/api/repos/github/MrOlm/drep"}, {"uid": "github/Qepanna/goFlux", "html_url": "https://rseng.github.io/software/repository/github/Qepanna/goFlux", "api_url": "https://rseng.github.io/software/api/repos/github/Qepanna/goFlux"}, {"uid": "github/jsh58/Genrich", "html_url": "https://rseng.github.io/software/repository/github/jsh58/Genrich", "api_url": "https://rseng.github.io/software/api/repos/github/jsh58/Genrich"}, {"uid": "github/BjoernBiltzinger/pyspi", "html_url": "https://rseng.github.io/software/repository/github/BjoernBiltzinger/pyspi", "api_url": "https://rseng.github.io/software/api/repos/github/BjoernBiltzinger/pyspi"}, {"uid": "github/dnafinder/uroccomp", "html_url": "https://rseng.github.io/software/repository/github/dnafinder/uroccomp", "api_url": "https://rseng.github.io/software/api/repos/github/dnafinder/uroccomp"}, {"uid": "github/nanograv/enterprise", "html_url": "https://rseng.github.io/software/repository/github/nanograv/enterprise", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/enterprise"}, {"uid": "github/nanograv/PINT", "html_url": "https://rseng.github.io/software/repository/github/nanograv/PINT", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/PINT"}, {"uid": "github/jiwoncpark/baobab", "html_url": "https://rseng.github.io/software/repository/github/jiwoncpark/baobab", "api_url": "https://rseng.github.io/software/api/repos/github/jiwoncpark/baobab"}, {"uid": "github/icbm-iupui/STAFF", "html_url": "https://rseng.github.io/software/repository/github/icbm-iupui/STAFF", "api_url": "https://rseng.github.io/software/api/repos/github/icbm-iupui/STAFF"}, {"uid": "github/BoPeng/simuPOP", "html_url": "https://rseng.github.io/software/repository/github/BoPeng/simuPOP", "api_url": "https://rseng.github.io/software/api/repos/github/BoPeng/simuPOP"}, {"uid": "github/AdriaJ/polyclean", "html_url": "https://rseng.github.io/software/repository/github/AdriaJ/polyclean", "api_url": "https://rseng.github.io/software/api/repos/github/AdriaJ/polyclean"}, {"uid": "github/DariaGangardt/pAGN", "html_url": "https://rseng.github.io/software/repository/github/DariaGangardt/pAGN", "api_url": "https://rseng.github.io/software/api/repos/github/DariaGangardt/pAGN"}, {"uid": "github/raspishake/rsudp", "html_url": "https://rseng.github.io/software/repository/github/raspishake/rsudp", "api_url": "https://rseng.github.io/software/api/repos/github/raspishake/rsudp"}, {"uid": "github/mtholder/ncl", "html_url": "https://rseng.github.io/software/repository/github/mtholder/ncl", "api_url": "https://rseng.github.io/software/api/repos/github/mtholder/ncl"}, {"uid": "github/adamjermyn/Skye", "html_url": "https://rseng.github.io/software/repository/github/adamjermyn/Skye", "api_url": "https://rseng.github.io/software/api/repos/github/adamjermyn/Skye"}, {"uid": "github/nhhaidee/WaveSeekerNet", "html_url": "https://rseng.github.io/software/repository/github/nhhaidee/WaveSeekerNet", "api_url": "https://rseng.github.io/software/api/repos/github/nhhaidee/WaveSeekerNet"}, {"uid": "github/ABM4ALL/Melodie", "html_url": "https://rseng.github.io/software/repository/github/ABM4ALL/Melodie", "api_url": "https://rseng.github.io/software/api/repos/github/ABM4ALL/Melodie"}, {"uid": "github/zqfang/gseapy", "html_url": "https://rseng.github.io/software/repository/github/zqfang/gseapy", "api_url": "https://rseng.github.io/software/api/repos/github/zqfang/gseapy"}, {"uid": "github/johnlee4/CoCoCoNet", "html_url": "https://rseng.github.io/software/repository/github/johnlee4/CoCoCoNet", "api_url": "https://rseng.github.io/software/api/repos/github/johnlee4/CoCoCoNet"}, {"uid": "github/NETL-RIC/URC-Assessment-Method", "html_url": "https://rseng.github.io/software/repository/github/NETL-RIC/URC-Assessment-Method", "api_url": "https://rseng.github.io/software/api/repos/github/NETL-RIC/URC-Assessment-Method"}, {"uid": "github/jeancmaia/mcglm", "html_url": "https://rseng.github.io/software/repository/github/jeancmaia/mcglm", "api_url": "https://rseng.github.io/software/api/repos/github/jeancmaia/mcglm"}, {"uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TransitionsInTimeseries.jl"}, {"uid": "github/JuliaDynamics/DrWatson.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/DrWatson.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/DrWatson.jl"}, {"uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TimeseriesSurrogates.jl"}, {"uid": "github/MatthijsHak/MetalDock", "html_url": "https://rseng.github.io/software/repository/github/MatthijsHak/MetalDock", "api_url": "https://rseng.github.io/software/api/repos/github/MatthijsHak/MetalDock"}, {"uid": "github/sustainableaviation/jetfuelburn", "html_url": "https://rseng.github.io/software/repository/github/sustainableaviation/jetfuelburn", "api_url": "https://rseng.github.io/software/api/repos/github/sustainableaviation/jetfuelburn"}, {"uid": "github/yhoogstrate/fastafs", "html_url": "https://rseng.github.io/software/repository/github/yhoogstrate/fastafs", "api_url": "https://rseng.github.io/software/api/repos/github/yhoogstrate/fastafs"}, {"uid": "github/vidakris/flatwrm", "html_url": "https://rseng.github.io/software/repository/github/vidakris/flatwrm", "api_url": "https://rseng.github.io/software/api/repos/github/vidakris/flatwrm"}, {"uid": "github/solislemuslab/minaa", "html_url": "https://rseng.github.io/software/repository/github/solislemuslab/minaa", "api_url": "https://rseng.github.io/software/api/repos/github/solislemuslab/minaa"}, {"uid": "github/genouest/biomaj-cli", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-cli"}, {"uid": "github/genouest/biomaj-daemon", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-daemon", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-daemon"}, {"uid": "github/lasseignelab/CINmetrics", "html_url": "https://rseng.github.io/software/repository/github/lasseignelab/CINmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/lasseignelab/CINmetrics"}, {"uid": "github/deepmind/alphafold", "html_url": "https://rseng.github.io/software/repository/github/deepmind/alphafold", "api_url": "https://rseng.github.io/software/api/repos/github/deepmind/alphafold"}, {"uid": "github/askap-craco/CELEBI", "html_url": "https://rseng.github.io/software/repository/github/askap-craco/CELEBI", "api_url": "https://rseng.github.io/software/api/repos/github/askap-craco/CELEBI"}, {"uid": "github/PopGenClustering/Clumppling", "html_url": "https://rseng.github.io/software/repository/github/PopGenClustering/Clumppling", "api_url": "https://rseng.github.io/software/api/repos/github/PopGenClustering/Clumppling"}, {"uid": "github/alvinxhan/Phydelity", "html_url": "https://rseng.github.io/software/repository/github/alvinxhan/Phydelity", "api_url": "https://rseng.github.io/software/api/repos/github/alvinxhan/Phydelity"}, {"uid": "github/juanaldayparejo/archnemesis-dist", "html_url": "https://rseng.github.io/software/repository/github/juanaldayparejo/archnemesis-dist", "api_url": "https://rseng.github.io/software/api/repos/github/juanaldayparejo/archnemesis-dist"}, {"uid": "github/BPSB/combine-p-values-discrete", "html_url": "https://rseng.github.io/software/repository/github/BPSB/combine-p-values-discrete", "api_url": "https://rseng.github.io/software/api/repos/github/BPSB/combine-p-values-discrete"}, {"uid": "github/dgbowl/yadg", "html_url": "https://rseng.github.io/software/repository/github/dgbowl/yadg", "api_url": "https://rseng.github.io/software/api/repos/github/dgbowl/yadg"}, {"uid": "github/BioinfoUNIBA/REDItools2", "html_url": "https://rseng.github.io/software/repository/github/BioinfoUNIBA/REDItools2", "api_url": "https://rseng.github.io/software/api/repos/github/BioinfoUNIBA/REDItools2"}, {"uid": "github/bedops/bedops", "html_url": "https://rseng.github.io/software/repository/github/bedops/bedops", "api_url": "https://rseng.github.io/software/api/repos/github/bedops/bedops"}, {"uid": "github/hydrosolutions/riversCentralAsia", "html_url": "https://rseng.github.io/software/repository/github/hydrosolutions/riversCentralAsia", "api_url": "https://rseng.github.io/software/api/repos/github/hydrosolutions/riversCentralAsia"}, {"uid": "github/jupyterlab/jupyterlab", "html_url": "https://rseng.github.io/software/repository/github/jupyterlab/jupyterlab", "api_url": "https://rseng.github.io/software/api/repos/github/jupyterlab/jupyterlab"}, {"uid": "github/casaluca/bolometric-corrections", "html_url": "https://rseng.github.io/software/repository/github/casaluca/bolometric-corrections", "api_url": "https://rseng.github.io/software/api/repos/github/casaluca/bolometric-corrections"}, {"uid": "github/hungyipu/Odyssey", "html_url": "https://rseng.github.io/software/repository/github/hungyipu/Odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/hungyipu/Odyssey"}, {"uid": "github/niemasd/CoaTran", "html_url": "https://rseng.github.io/software/repository/github/niemasd/CoaTran", "api_url": "https://rseng.github.io/software/api/repos/github/niemasd/CoaTran"}, {"uid": "github/CSi-Studio/G-Aligner", "html_url": "https://rseng.github.io/software/repository/github/CSi-Studio/G-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/CSi-Studio/G-Aligner"}, {"uid": "github/computational-chemical-biology/ChemWalker", "html_url": "https://rseng.github.io/software/repository/github/computational-chemical-biology/ChemWalker", "api_url": "https://rseng.github.io/software/api/repos/github/computational-chemical-biology/ChemWalker"}, {"uid": "github/damonge/CRIME", "html_url": "https://rseng.github.io/software/repository/github/damonge/CRIME", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CRIME"}, {"uid": "github/damonge/CoLoRe", "html_url": "https://rseng.github.io/software/repository/github/damonge/CoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CoLoRe"}, {"uid": "github/damonge/CUTE", "html_url": "https://rseng.github.io/software/repository/github/damonge/CUTE", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CUTE"}, {"uid": "github/damonge/schNell", "html_url": "https://rseng.github.io/software/repository/github/damonge/schNell", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/schNell"}, {"uid": "github/sauddy/GRINN", "html_url": "https://rseng.github.io/software/repository/github/sauddy/GRINN", "api_url": "https://rseng.github.io/software/api/repos/github/sauddy/GRINN"}, {"uid": "github/oschwengers/platon", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/platon", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/platon"}, {"uid": "github/oschwengers/referenceseeker", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/referenceseeker", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/referenceseeker"}, {"uid": "github/oschwengers/bakta", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/bakta", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/bakta"}, {"uid": "github/skschum/MFAssignR", "html_url": "https://rseng.github.io/software/repository/github/skschum/MFAssignR", "api_url": "https://rseng.github.io/software/api/repos/github/skschum/MFAssignR"}, {"uid": "github/MilesCranmer/PySR", "html_url": "https://rseng.github.io/software/repository/github/MilesCranmer/PySR", "api_url": "https://rseng.github.io/software/api/repos/github/MilesCranmer/PySR"}, {"uid": "github/matteozennaro/reps", "html_url": "https://rseng.github.io/software/repository/github/matteozennaro/reps", "api_url": "https://rseng.github.io/software/api/repos/github/matteozennaro/reps"}, {"uid": "github/ScialdoneLab/MitoHEAR", "html_url": "https://rseng.github.io/software/repository/github/ScialdoneLab/MitoHEAR", "api_url": "https://rseng.github.io/software/api/repos/github/ScialdoneLab/MitoHEAR"}, {"uid": "github/twinl/website", "html_url": "https://rseng.github.io/software/repository/github/twinl/website", "api_url": "https://rseng.github.io/software/api/repos/github/twinl/website"}, {"uid": "github/bethgelab/foolbox", "html_url": "https://rseng.github.io/software/repository/github/bethgelab/foolbox", "api_url": "https://rseng.github.io/software/api/repos/github/bethgelab/foolbox"}, {"uid": "github/UCL/rmcmc", "html_url": "https://rseng.github.io/software/repository/github/UCL/rmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/UCL/rmcmc"}, {"uid": "github/VU-IVM/VineCopulas", "html_url": "https://rseng.github.io/software/repository/github/VU-IVM/VineCopulas", "api_url": "https://rseng.github.io/software/api/repos/github/VU-IVM/VineCopulas"}, {"uid": "github/UK-Digital-Heart-Project/4Dsurvival", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsurvival"}, {"uid": "github/UK-Digital-Heart-Project/4Dsegment", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsegment", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsegment"}, {"uid": "github/bootphon/phonemizer", "html_url": "https://rseng.github.io/software/repository/github/bootphon/phonemizer", "api_url": "https://rseng.github.io/software/api/repos/github/bootphon/phonemizer"}, {"uid": "github/BonsonW/slow5curl", "html_url": "https://rseng.github.io/software/repository/github/BonsonW/slow5curl", "api_url": "https://rseng.github.io/software/api/repos/github/BonsonW/slow5curl"}, {"uid": "github/bwkeller/PASTA", "html_url": "https://rseng.github.io/software/repository/github/bwkeller/PASTA", "api_url": "https://rseng.github.io/software/api/repos/github/bwkeller/PASTA"}, {"uid": "github/astroCV/astroCV", "html_url": "https://rseng.github.io/software/repository/github/astroCV/astroCV", "api_url": "https://rseng.github.io/software/api/repos/github/astroCV/astroCV"}, {"uid": "github/ptriska/WavesDash", "html_url": "https://rseng.github.io/software/repository/github/ptriska/WavesDash", "api_url": "https://rseng.github.io/software/api/repos/github/ptriska/WavesDash"}, {"uid": "github/AMICI-dev/AMICI", "html_url": "https://rseng.github.io/software/repository/github/AMICI-dev/AMICI", "api_url": "https://rseng.github.io/software/api/repos/github/AMICI-dev/AMICI"}, {"uid": "github/cadet/CADET-Core", "html_url": "https://rseng.github.io/software/repository/github/cadet/CADET-Core", "api_url": "https://rseng.github.io/software/api/repos/github/cadet/CADET-Core"}, {"uid": "github/open-aviation/tangram", "html_url": "https://rseng.github.io/software/repository/github/open-aviation/tangram", "api_url": "https://rseng.github.io/software/api/repos/github/open-aviation/tangram"}, {"uid": "github/CSSEGISandData/COVID-19", "html_url": "https://rseng.github.io/software/repository/github/CSSEGISandData/COVID-19", "api_url": "https://rseng.github.io/software/api/repos/github/CSSEGISandData/COVID-19"}, {"uid": "github/siara-cc/Unishox2", "html_url": "https://rseng.github.io/software/repository/github/siara-cc/Unishox2", "api_url": "https://rseng.github.io/software/api/repos/github/siara-cc/Unishox2"}, {"uid": "github/Lyalpha/spalipy", "html_url": "https://rseng.github.io/software/repository/github/Lyalpha/spalipy", "api_url": "https://rseng.github.io/software/api/repos/github/Lyalpha/spalipy"}, {"uid": "github/simple-crypto/SCALib", "html_url": "https://rseng.github.io/software/repository/github/simple-crypto/SCALib", "api_url": "https://rseng.github.io/software/api/repos/github/simple-crypto/SCALib"}, {"uid": "github/uw-comphys/openccm", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/openccm", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/openccm"}, {"uid": "github/uw-comphys/shapelets", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/shapelets", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/shapelets"}, {"uid": "github/uw-comphys/opencmp", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/opencmp", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/opencmp"}, {"uid": "github/changliao1025/pyflowline", "html_url": "https://rseng.github.io/software/repository/github/changliao1025/pyflowline", "api_url": "https://rseng.github.io/software/api/repos/github/changliao1025/pyflowline"}, {"uid": "github/lisadang27/SPCA", "html_url": "https://rseng.github.io/software/repository/github/lisadang27/SPCA", "api_url": "https://rseng.github.io/software/api/repos/github/lisadang27/SPCA"}, {"uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "html_url": "https://rseng.github.io/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "api_url": "https://rseng.github.io/software/api/repos/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-"}, {"uid": "github/cosmo-epfl/chemiscope", "html_url": "https://rseng.github.io/software/repository/github/cosmo-epfl/chemiscope", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-epfl/chemiscope"}, {"uid": "github/hdeeg/KvW", "html_url": "https://rseng.github.io/software/repository/github/hdeeg/KvW", "api_url": "https://rseng.github.io/software/api/repos/github/hdeeg/KvW"}, {"uid": "github/AWehrhahn/SME", "html_url": "https://rseng.github.io/software/repository/github/AWehrhahn/SME", "api_url": "https://rseng.github.io/software/api/repos/github/AWehrhahn/SME"}, {"uid": "github/sing-group/seda", "html_url": "https://rseng.github.io/software/repository/github/sing-group/seda", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/seda"}, {"uid": "github/sing-group/my-brain-seq", "html_url": "https://rseng.github.io/software/repository/github/sing-group/my-brain-seq", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/my-brain-seq"}, {"uid": "github/goualard-f/MicroFloatingPoints.jl", "html_url": "https://rseng.github.io/software/repository/github/goualard-f/MicroFloatingPoints.jl", "api_url": "https://rseng.github.io/software/api/repos/github/goualard-f/MicroFloatingPoints.jl"}, {"uid": "github/gacou54/pyorthanc", "html_url": "https://rseng.github.io/software/repository/github/gacou54/pyorthanc", "api_url": "https://rseng.github.io/software/api/repos/github/gacou54/pyorthanc"}, {"uid": "github/vsulis5357/Sonification", "html_url": "https://rseng.github.io/software/repository/github/vsulis5357/Sonification", "api_url": "https://rseng.github.io/software/api/repos/github/vsulis5357/Sonification"}, {"uid": "github/mariapetro/LeHaMoC", "html_url": "https://rseng.github.io/software/repository/github/mariapetro/LeHaMoC", "api_url": "https://rseng.github.io/software/api/repos/github/mariapetro/LeHaMoC"}, {"uid": "github/wustat/rjaf", "html_url": "https://rseng.github.io/software/repository/github/wustat/rjaf", "api_url": "https://rseng.github.io/software/api/repos/github/wustat/rjaf"}, {"uid": "github/khowe/quicktree", "html_url": "https://rseng.github.io/software/repository/github/khowe/quicktree", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quicktree"}, {"uid": "github/khowe/quick", "html_url": "https://rseng.github.io/software/repository/github/khowe/quick", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quick"}, {"uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", "html_url": "https://rseng.github.io/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", "api_url": "https://rseng.github.io/software/api/repos/github/mengyao/Complete-Striped-Smith-Waterman-Library"}, {"uid": "github/kavonrtep/dante", "html_url": "https://rseng.github.io/software/repository/github/kavonrtep/dante", "api_url": "https://rseng.github.io/software/api/repos/github/kavonrtep/dante"}, {"uid": "github/cgobat/asymmetric_uncertainty", "html_url": "https://rseng.github.io/software/repository/github/cgobat/asymmetric_uncertainty", "api_url": "https://rseng.github.io/software/api/repos/github/cgobat/asymmetric_uncertainty"}, {"uid": "github/juliotux/astropop", "html_url": "https://rseng.github.io/software/repository/github/juliotux/astropop", "api_url": "https://rseng.github.io/software/api/repos/github/juliotux/astropop"}, {"uid": "github/COINtoolbox/CosmoPhotoz", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/CosmoPhotoz", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/CosmoPhotoz"}, {"uid": "github/COINtoolbox/ActSNClass", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/ActSNClass", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/ActSNClass"}, {"uid": "github/COINtoolbox/DRACULA", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/DRACULA", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/DRACULA"}, {"uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", "html_url": "https://rseng.github.io/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", "api_url": "https://rseng.github.io/software/api/repos/github/semiautomaticgit/SemiAutomaticClassificationPlugin"}, {"uid": "github/mggg/ecological-inference", "html_url": "https://rseng.github.io/software/repository/github/mggg/ecological-inference", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/ecological-inference"}, {"uid": "github/mggg/votekit", "html_url": "https://rseng.github.io/software/repository/github/mggg/votekit", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/votekit"}, {"uid": "github/musevlt/muse-psfr", "html_url": "https://rseng.github.io/software/repository/github/musevlt/muse-psfr", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/muse-psfr"}, {"uid": "github/musevlt/origin", "html_url": "https://rseng.github.io/software/repository/github/musevlt/origin", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/origin"}, {"uid": "github/mjoppich/bioGUItools", "html_url": "https://rseng.github.io/software/repository/github/mjoppich/bioGUItools", "api_url": "https://rseng.github.io/software/api/repos/github/mjoppich/bioGUItools"}, {"uid": "github/GalacticDynamics/unxt", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics/unxt", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics/unxt"}, {"uid": "github/Qile0317/APackOfTheClones", "html_url": "https://rseng.github.io/software/repository/github/Qile0317/APackOfTheClones", "api_url": "https://rseng.github.io/software/api/repos/github/Qile0317/APackOfTheClones"}, {"uid": "github/hippalectryon-0/pyloggrid", "html_url": "https://rseng.github.io/software/repository/github/hippalectryon-0/pyloggrid", "api_url": "https://rseng.github.io/software/api/repos/github/hippalectryon-0/pyloggrid"}, {"uid": "github/fastpm/fastpm", "html_url": "https://rseng.github.io/software/repository/github/fastpm/fastpm", "api_url": "https://rseng.github.io/software/api/repos/github/fastpm/fastpm"}, {"uid": "github/N-Wouda/ALNS", "html_url": "https://rseng.github.io/software/repository/github/N-Wouda/ALNS", "api_url": "https://rseng.github.io/software/api/repos/github/N-Wouda/ALNS"}, {"uid": "github/julianreul/mode_behave", "html_url": "https://rseng.github.io/software/repository/github/julianreul/mode_behave", "api_url": "https://rseng.github.io/software/api/repos/github/julianreul/mode_behave"}, {"uid": "github/biocircuits/bioscrape", "html_url": "https://rseng.github.io/software/repository/github/biocircuits/bioscrape", "api_url": "https://rseng.github.io/software/api/repos/github/biocircuits/bioscrape"}, {"uid": "github/dzerbino/velvet", "html_url": "https://rseng.github.io/software/repository/github/dzerbino/velvet", "api_url": "https://rseng.github.io/software/api/repos/github/dzerbino/velvet"}, {"uid": "github/Zilong-Li/PCAone", "html_url": "https://rseng.github.io/software/repository/github/Zilong-Li/PCAone", "api_url": "https://rseng.github.io/software/api/repos/github/Zilong-Li/PCAone"}, {"uid": "github/rainwoodman/kdcount", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/kdcount", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/kdcount"}, {"uid": "github/rainwoodman/bigfile", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/bigfile"}, {"uid": "github/EMResearch/EvoMaster", "html_url": "https://rseng.github.io/software/repository/github/EMResearch/EvoMaster", "api_url": "https://rseng.github.io/software/api/repos/github/EMResearch/EvoMaster"}, {"uid": "github/sebastian-zieba/PACMAN", "html_url": "https://rseng.github.io/software/repository/github/sebastian-zieba/PACMAN", "api_url": "https://rseng.github.io/software/api/repos/github/sebastian-zieba/PACMAN"}, {"uid": "github/mneeleman/qubefit", "html_url": "https://rseng.github.io/software/repository/github/mneeleman/qubefit", "api_url": "https://rseng.github.io/software/api/repos/github/mneeleman/qubefit"}, {"uid": "github/Blosc/c-blosc", "html_url": "https://rseng.github.io/software/repository/github/Blosc/c-blosc", "api_url": "https://rseng.github.io/software/api/repos/github/Blosc/c-blosc"}, {"uid": "github/ppsp-team/PyNM", "html_url": "https://rseng.github.io/software/repository/github/ppsp-team/PyNM", "api_url": "https://rseng.github.io/software/api/repos/github/ppsp-team/PyNM"}, {"uid": "github/PaulRitsche/DLTrack", "html_url": "https://rseng.github.io/software/repository/github/PaulRitsche/DLTrack", "api_url": "https://rseng.github.io/software/api/repos/github/PaulRitsche/DLTrack"}, {"uid": "github/szpiech/selscan", "html_url": "https://rseng.github.io/software/repository/github/szpiech/selscan", "api_url": "https://rseng.github.io/software/api/repos/github/szpiech/selscan"}, {"uid": "github/BayraktarLab/cell2location", "html_url": "https://rseng.github.io/software/repository/github/BayraktarLab/cell2location", "api_url": "https://rseng.github.io/software/api/repos/github/BayraktarLab/cell2location"}, {"uid": "github/BoevaLab/FREEC", "html_url": "https://rseng.github.io/software/repository/github/BoevaLab/FREEC", "api_url": "https://rseng.github.io/software/api/repos/github/BoevaLab/FREEC"}, {"uid": "github/anderslogg/geco", "html_url": "https://rseng.github.io/software/repository/github/anderslogg/geco", "api_url": "https://rseng.github.io/software/api/repos/github/anderslogg/geco"}, {"uid": "github/PGB-LIV/MHCVision", "html_url": "https://rseng.github.io/software/repository/github/PGB-LIV/MHCVision", "api_url": "https://rseng.github.io/software/api/repos/github/PGB-LIV/MHCVision"}, {"uid": "github/OSeMOSYS/otoole", "html_url": "https://rseng.github.io/software/repository/github/OSeMOSYS/otoole", "api_url": "https://rseng.github.io/software/api/repos/github/OSeMOSYS/otoole"}, {"uid": "github/dirac-institute/asterogap", "html_url": "https://rseng.github.io/software/repository/github/dirac-institute/asterogap", "api_url": "https://rseng.github.io/software/api/repos/github/dirac-institute/asterogap"}, {"uid": "github/PhysiBoSS/PhysiBoSS", "html_url": "https://rseng.github.io/software/repository/github/PhysiBoSS/PhysiBoSS", "api_url": "https://rseng.github.io/software/api/repos/github/PhysiBoSS/PhysiBoSS"}, {"uid": "github/jstjohn/SeqPrep", "html_url": "https://rseng.github.io/software/repository/github/jstjohn/SeqPrep", "api_url": "https://rseng.github.io/software/api/repos/github/jstjohn/SeqPrep"}, {"uid": "github/cjcollin37/IsoFATE", "html_url": "https://rseng.github.io/software/repository/github/cjcollin37/IsoFATE", "api_url": "https://rseng.github.io/software/api/repos/github/cjcollin37/IsoFATE"}, {"uid": "github/utpal-singh/SAnTex", "html_url": "https://rseng.github.io/software/repository/github/utpal-singh/SAnTex", "api_url": "https://rseng.github.io/software/api/repos/github/utpal-singh/SAnTex"}, {"uid": "github/ScionResearch/genomesizeR", "html_url": "https://rseng.github.io/software/repository/github/ScionResearch/genomesizeR", "api_url": "https://rseng.github.io/software/api/repos/github/ScionResearch/genomesizeR"}, {"uid": "github/barnesgroupICL/Driftfusion", "html_url": "https://rseng.github.io/software/repository/github/barnesgroupICL/Driftfusion", "api_url": "https://rseng.github.io/software/api/repos/github/barnesgroupICL/Driftfusion"}, {"uid": "github/moscibrodzka/ipole", "html_url": "https://rseng.github.io/software/repository/github/moscibrodzka/ipole", "api_url": "https://rseng.github.io/software/api/repos/github/moscibrodzka/ipole"}, {"uid": "github/KiranLDA/PAMLr", "html_url": "https://rseng.github.io/software/repository/github/KiranLDA/PAMLr", "api_url": "https://rseng.github.io/software/api/repos/github/KiranLDA/PAMLr"}, {"uid": "github/lgbouma/gyro-interp", "html_url": "https://rseng.github.io/software/repository/github/lgbouma/gyro-interp", "api_url": "https://rseng.github.io/software/api/repos/github/lgbouma/gyro-interp"}, {"uid": "github/CobayaSampler/cobaya", "html_url": "https://rseng.github.io/software/repository/github/CobayaSampler/cobaya", "api_url": "https://rseng.github.io/software/api/repos/github/CobayaSampler/cobaya"}, {"uid": "github/AStcherbinine/omegapy", "html_url": "https://rseng.github.io/software/repository/github/AStcherbinine/omegapy", "api_url": "https://rseng.github.io/software/api/repos/github/AStcherbinine/omegapy"}, {"uid": "github/jgoodeve/streaktools", "html_url": "https://rseng.github.io/software/repository/github/jgoodeve/streaktools", "api_url": "https://rseng.github.io/software/api/repos/github/jgoodeve/streaktools"}, {"uid": "github/bloch-labs/bloch", "html_url": "https://rseng.github.io/software/repository/github/bloch-labs/bloch", "api_url": "https://rseng.github.io/software/api/repos/github/bloch-labs/bloch"}, {"uid": "github/MIT-STARLab/deconfuser", "html_url": "https://rseng.github.io/software/repository/github/MIT-STARLab/deconfuser", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-STARLab/deconfuser"}, {"uid": "github/mzy2240/ESA", "html_url": "https://rseng.github.io/software/repository/github/mzy2240/ESA", "api_url": "https://rseng.github.io/software/api/repos/github/mzy2240/ESA"}, {"uid": "github/Parsoa/SVDSS", "html_url": "https://rseng.github.io/software/repository/github/Parsoa/SVDSS", "api_url": "https://rseng.github.io/software/api/repos/github/Parsoa/SVDSS"}, {"uid": "github/ahwkuepper/mcluster", "html_url": "https://rseng.github.io/software/repository/github/ahwkuepper/mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/ahwkuepper/mcluster"}, {"uid": "github/mivp/encube", "html_url": "https://rseng.github.io/software/repository/github/mivp/encube", "api_url": "https://rseng.github.io/software/api/repos/github/mivp/encube"}, {"uid": "github/neeravkaushal/RIDs-in-WCDs", "html_url": "https://rseng.github.io/software/repository/github/neeravkaushal/RIDs-in-WCDs", "api_url": "https://rseng.github.io/software/api/repos/github/neeravkaushal/RIDs-in-WCDs"}, {"uid": "github/HillLab/SomaticSiMu", "html_url": "https://rseng.github.io/software/repository/github/HillLab/SomaticSiMu", "api_url": "https://rseng.github.io/software/api/repos/github/HillLab/SomaticSiMu"}, {"uid": "github/Onogi/VIGoR", "html_url": "https://rseng.github.io/software/repository/github/Onogi/VIGoR", "api_url": "https://rseng.github.io/software/api/repos/github/Onogi/VIGoR"}, {"uid": "github/NeotomaDB/neotoma2", "html_url": "https://rseng.github.io/software/repository/github/NeotomaDB/neotoma2", "api_url": "https://rseng.github.io/software/api/repos/github/NeotomaDB/neotoma2"}, {"uid": "github/Kennicutt/SAUSERO", "html_url": "https://rseng.github.io/software/repository/github/Kennicutt/SAUSERO", "api_url": "https://rseng.github.io/software/api/repos/github/Kennicutt/SAUSERO"}, {"uid": "github/FEniCS/basix", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/basix", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/basix"}, {"uid": "github/FEniCS/ffcx", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/ffcx", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/ffcx"}, {"uid": "github/GreycLab/gmic", "html_url": "https://rseng.github.io/software/repository/github/GreycLab/gmic", "api_url": "https://rseng.github.io/software/api/repos/github/GreycLab/gmic"}, {"uid": "github/expressionanalysis/ea-utils", "html_url": "https://rseng.github.io/software/repository/github/expressionanalysis/ea-utils", "api_url": "https://rseng.github.io/software/api/repos/github/expressionanalysis/ea-utils"}, {"uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "html_url": "https://rseng.github.io/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "api_url": "https://rseng.github.io/software/api/repos/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs"}, {"uid": "github/simoncasassus/ConeRot", "html_url": "https://rseng.github.io/software/repository/github/simoncasassus/ConeRot", "api_url": "https://rseng.github.io/software/api/repos/github/simoncasassus/ConeRot"}, {"uid": "github/mirochaj/ares", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/ares", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/ares"}, {"uid": "github/mirochaj/sedop", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/sedop", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/sedop"}, {"uid": "github/FlorianThibord/OptimiR", "html_url": "https://rseng.github.io/software/repository/github/FlorianThibord/OptimiR", "api_url": "https://rseng.github.io/software/api/repos/github/FlorianThibord/OptimiR"}, {"uid": "github/sibirrer/psfr", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/psfr", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/psfr"}, {"uid": "github/sibirrer/lenstronomy", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/lenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/lenstronomy"}, {"uid": "github/sibirrer/hierArc", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/hierArc", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/hierArc"}, {"uid": "github/mgcooper/baseflow", "html_url": "https://rseng.github.io/software/repository/github/mgcooper/baseflow", "api_url": "https://rseng.github.io/software/api/repos/github/mgcooper/baseflow"}, {"uid": "github/potassco/clingo", "html_url": "https://rseng.github.io/software/repository/github/potassco/clingo", "api_url": "https://rseng.github.io/software/api/repos/github/potassco/clingo"}, {"uid": "github/Ecogenomics/GTDBTk", "html_url": "https://rseng.github.io/software/repository/github/Ecogenomics/GTDBTk", "api_url": "https://rseng.github.io/software/api/repos/github/Ecogenomics/GTDBTk"}, {"uid": "github/gmorras/pyEFPE", "html_url": "https://rseng.github.io/software/repository/github/gmorras/pyEFPE", "api_url": "https://rseng.github.io/software/api/repos/github/gmorras/pyEFPE"}, {"uid": "github/JonasRieger/ldaPrototype", "html_url": "https://rseng.github.io/software/repository/github/JonasRieger/ldaPrototype", "api_url": "https://rseng.github.io/software/api/repos/github/JonasRieger/ldaPrototype"}, {"uid": "github/NOSALRO/robot_dart", "html_url": "https://rseng.github.io/software/repository/github/NOSALRO/robot_dart", "api_url": "https://rseng.github.io/software/api/repos/github/NOSALRO/robot_dart"}, {"uid": "github/biomed-AI/GraphBepi", "html_url": "https://rseng.github.io/software/repository/github/biomed-AI/GraphBepi", "api_url": "https://rseng.github.io/software/api/repos/github/biomed-AI/GraphBepi"}, {"uid": "github/rinikerlab/Ensembler", "html_url": "https://rseng.github.io/software/repository/github/rinikerlab/Ensembler", "api_url": "https://rseng.github.io/software/api/repos/github/rinikerlab/Ensembler"}, {"uid": "github/mpound/pdrtpy", "html_url": "https://rseng.github.io/software/repository/github/mpound/pdrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/pdrtpy"}, {"uid": "github/mpound/comb", "html_url": "https://rseng.github.io/software/repository/github/mpound/comb", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/comb"}, {"uid": "github/elwinter/nnde", "html_url": "https://rseng.github.io/software/repository/github/elwinter/nnde", "api_url": "https://rseng.github.io/software/api/repos/github/elwinter/nnde"}, {"uid": "github/CMU-SAFARI/BLEND", "html_url": "https://rseng.github.io/software/repository/github/CMU-SAFARI/BLEND", "api_url": "https://rseng.github.io/software/api/repos/github/CMU-SAFARI/BLEND"}, {"uid": "github/VirtualPlanetaryLaboratory/atmos", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/atmos", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/atmos"}, {"uid": "github/VirtualPlanetaryLaboratory/vplanet", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/vplanet", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/vplanet"}, {"uid": "github/mthorrell/gbnet", "html_url": "https://rseng.github.io/software/repository/github/mthorrell/gbnet", "api_url": "https://rseng.github.io/software/api/repos/github/mthorrell/gbnet"}, {"uid": "github/FCS-analysis/multipletau", "html_url": "https://rseng.github.io/software/repository/github/FCS-analysis/multipletau", "api_url": "https://rseng.github.io/software/api/repos/github/FCS-analysis/multipletau"}, {"uid": "github/ropenscilabs/allcontributors", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/allcontributors", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/allcontributors"}, {"uid": "github/ropenscilabs/r2readthedocs", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/r2readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/r2readthedocs"}, {"uid": "github/ropenscilabs/gendercoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/gendercoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/gendercoder"}, {"uid": "github/ropenscilabs/qcoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/qcoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/qcoder"}, {"uid": "github/dellytools/sansa", "html_url": "https://rseng.github.io/software/repository/github/dellytools/sansa", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/sansa"}, {"uid": "github/dellytools/delly", "html_url": "https://rseng.github.io/software/repository/github/dellytools/delly", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/delly"}, {"uid": "github/josegcpa/nnunet_serve", "html_url": "https://rseng.github.io/software/repository/github/josegcpa/nnunet_serve", "api_url": "https://rseng.github.io/software/api/repos/github/josegcpa/nnunet_serve"}, {"uid": "github/mendezVKI/MODULO", "html_url": "https://rseng.github.io/software/repository/github/mendezVKI/MODULO", "api_url": "https://rseng.github.io/software/api/repos/github/mendezVKI/MODULO"}, {"uid": "github/fgbuster/fgbuster", "html_url": "https://rseng.github.io/software/repository/github/fgbuster/fgbuster", "api_url": "https://rseng.github.io/software/api/repos/github/fgbuster/fgbuster"}, {"uid": "github/wm75/vaporup", "html_url": "https://rseng.github.io/software/repository/github/wm75/vaporup", "api_url": "https://rseng.github.io/software/api/repos/github/wm75/vaporup"}, {"uid": "github/MDAnalysis/mdanalysis", "html_url": "https://rseng.github.io/software/repository/github/MDAnalysis/mdanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/MDAnalysis/mdanalysis"}, {"uid": "github/garrelt/C2-Ray3Dm1D_Helium", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray3Dm1D_Helium"}, {"uid": "github/garrelt/C2-Ray1D", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray1D", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray1D"}, {"uid": "github/dcjones/quip", "html_url": "https://rseng.github.io/software/repository/github/dcjones/quip", "api_url": "https://rseng.github.io/software/api/repos/github/dcjones/quip"}, {"uid": "github/LDEO-CREW/Pythonic-DISORT", "html_url": "https://rseng.github.io/software/repository/github/LDEO-CREW/Pythonic-DISORT", "api_url": "https://rseng.github.io/software/api/repos/github/LDEO-CREW/Pythonic-DISORT"}, {"uid": "github/KarrLab/de_sim", "html_url": "https://rseng.github.io/software/repository/github/KarrLab/de_sim", "api_url": "https://rseng.github.io/software/api/repos/github/KarrLab/de_sim"}, {"uid": "github/toshiyan/cmblensplus", "html_url": "https://rseng.github.io/software/repository/github/toshiyan/cmblensplus", "api_url": "https://rseng.github.io/software/api/repos/github/toshiyan/cmblensplus"}, {"uid": "github/cagrikymk/JAX-ReaxFF", "html_url": "https://rseng.github.io/software/repository/github/cagrikymk/JAX-ReaxFF", "api_url": "https://rseng.github.io/software/api/repos/github/cagrikymk/JAX-ReaxFF"}, {"uid": "github/qianlivan/RPPPS", "html_url": "https://rseng.github.io/software/repository/github/qianlivan/RPPPS", "api_url": "https://rseng.github.io/software/api/repos/github/qianlivan/RPPPS"}, {"uid": "github/patrickwest/EukRep", "html_url": "https://rseng.github.io/software/repository/github/patrickwest/EukRep", "api_url": "https://rseng.github.io/software/api/repos/github/patrickwest/EukRep"}, {"uid": "github/lucatelli/morphen", "html_url": "https://rseng.github.io/software/repository/github/lucatelli/morphen", "api_url": "https://rseng.github.io/software/api/repos/github/lucatelli/morphen"}, {"uid": "github/ziotom78/libpolycomp", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/libpolycomp", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/libpolycomp"}, {"uid": "github/ziotom78/Healpix.jl", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/Healpix.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/Healpix.jl"}, {"uid": "github/ziotom78/dacapo_calibration", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/dacapo_calibration", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/dacapo_calibration"}, {"uid": "github/pynucastro/pynucastro", "html_url": "https://rseng.github.io/software/repository/github/pynucastro/pynucastro", "api_url": "https://rseng.github.io/software/api/repos/github/pynucastro/pynucastro"}, {"uid": "github/fmichel/MaDKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/MaDKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/MaDKit"}, {"uid": "github/fmichel/TurtleKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/TurtleKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/TurtleKit"}, {"uid": "github/SebastianBocquet/pygtc", "html_url": "https://rseng.github.io/software/repository/github/SebastianBocquet/pygtc", "api_url": "https://rseng.github.io/software/api/repos/github/SebastianBocquet/pygtc"}, {"uid": "github/bluefoxr/COINr", "html_url": "https://rseng.github.io/software/repository/github/bluefoxr/COINr", "api_url": "https://rseng.github.io/software/api/repos/github/bluefoxr/COINr"}, {"uid": "github/putonti/virmine", "html_url": "https://rseng.github.io/software/repository/github/putonti/virmine", "api_url": "https://rseng.github.io/software/api/repos/github/putonti/virmine"}, {"uid": "github/seahorce-scidac/REMORA", "html_url": "https://rseng.github.io/software/repository/github/seahorce-scidac/REMORA", "api_url": "https://rseng.github.io/software/api/repos/github/seahorce-scidac/REMORA"}, {"uid": "github/rudeboybert/forestecology", "html_url": "https://rseng.github.io/software/repository/github/rudeboybert/forestecology", "api_url": "https://rseng.github.io/software/api/repos/github/rudeboybert/forestecology"}, {"uid": "github/containers/podman", "html_url": "https://rseng.github.io/software/repository/github/containers/podman", "api_url": "https://rseng.github.io/software/api/repos/github/containers/podman"}, {"uid": "github/msalibian/RBF", "html_url": "https://rseng.github.io/software/repository/github/msalibian/RBF", "api_url": "https://rseng.github.io/software/api/repos/github/msalibian/RBF"}, {"uid": "github/ivastar/clear", "html_url": "https://rseng.github.io/software/repository/github/ivastar/clear", "api_url": "https://rseng.github.io/software/api/repos/github/ivastar/clear"}, {"uid": "github/astrosmili/smili", "html_url": "https://rseng.github.io/software/repository/github/astrosmili/smili", "api_url": "https://rseng.github.io/software/api/repos/github/astrosmili/smili"}, {"uid": "github/NKI-CCB/PRECISE", "html_url": "https://rseng.github.io/software/repository/github/NKI-CCB/PRECISE", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-CCB/PRECISE"}, {"uid": "github/xfangcosmo/FFTLog-and-beyond", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/FFTLog-and-beyond", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/FFTLog-and-beyond"}, {"uid": "github/xfangcosmo/2DFFTLog", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/2DFFTLog", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/2DFFTLog"}, {"uid": "github/broadinstitute/gatk", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/gatk", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/gatk"}, {"uid": "github/broadinstitute/CellBender", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/CellBender", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/CellBender"}, {"uid": "github/broadinstitute/wot", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/wot", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/wot"}, {"uid": "github/broadinstitute/Drop-seq", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/Drop-seq", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/Drop-seq"}, {"uid": "github/broadinstitute/cromwell", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/cromwell", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/cromwell"}, {"uid": "github/broadinstitute/tensorqtl", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/tensorqtl", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/tensorqtl"}, {"uid": "github/broadinstitute/picard", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/picard", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/picard"}, {"uid": "github/nuc-astro/winnet", "html_url": "https://rseng.github.io/software/repository/github/nuc-astro/winnet", "api_url": "https://rseng.github.io/software/api/repos/github/nuc-astro/winnet"}, {"uid": "github/ethankruse/koi3278", "html_url": "https://rseng.github.io/software/repository/github/ethankruse/koi3278", "api_url": "https://rseng.github.io/software/api/repos/github/ethankruse/koi3278"}, {"uid": "github/xiaziyna/PyStarshade", "html_url": "https://rseng.github.io/software/repository/github/xiaziyna/PyStarshade", "api_url": "https://rseng.github.io/software/api/repos/github/xiaziyna/PyStarshade"}, {"uid": "github/mchalela/GriSPy", "html_url": "https://rseng.github.io/software/repository/github/mchalela/GriSPy", "api_url": "https://rseng.github.io/software/api/repos/github/mchalela/GriSPy"}, {"uid": "github/zhoulinumass/ML-wPBE", "html_url": "https://rseng.github.io/software/repository/github/zhoulinumass/ML-wPBE", "api_url": "https://rseng.github.io/software/api/repos/github/zhoulinumass/ML-wPBE"}, {"uid": "github/RTIInternational/gobbli", "html_url": "https://rseng.github.io/software/repository/github/RTIInternational/gobbli", "api_url": "https://rseng.github.io/software/api/repos/github/RTIInternational/gobbli"}, {"uid": "github/the-rccg/hw2d", "html_url": "https://rseng.github.io/software/repository/github/the-rccg/hw2d", "api_url": "https://rseng.github.io/software/api/repos/github/the-rccg/hw2d"}, {"uid": "github/josegit88/SCORPIO", "html_url": "https://rseng.github.io/software/repository/github/josegit88/SCORPIO", "api_url": "https://rseng.github.io/software/api/repos/github/josegit88/SCORPIO"}, {"uid": "github/tobias-dv-lnu/s4rdm3x", "html_url": "https://rseng.github.io/software/repository/github/tobias-dv-lnu/s4rdm3x", "api_url": "https://rseng.github.io/software/api/repos/github/tobias-dv-lnu/s4rdm3x"}, {"uid": "github/aymgal/COOLEST", "html_url": "https://rseng.github.io/software/repository/github/aymgal/COOLEST", "api_url": "https://rseng.github.io/software/api/repos/github/aymgal/COOLEST"}, {"uid": "github/PeterDenton/ANA", "html_url": "https://rseng.github.io/software/repository/github/PeterDenton/ANA", "api_url": "https://rseng.github.io/software/api/repos/github/PeterDenton/ANA"}, {"uid": "github/tseemann/mlst", "html_url": "https://rseng.github.io/software/repository/github/tseemann/mlst", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/mlst"}, {"uid": "github/tseemann/barrnap", "html_url": "https://rseng.github.io/software/repository/github/tseemann/barrnap", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/barrnap"}, {"uid": "github/tseemann/samclip", "html_url": "https://rseng.github.io/software/repository/github/tseemann/samclip", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/samclip"}, {"uid": "github/tseemann/abricate", "html_url": "https://rseng.github.io/software/repository/github/tseemann/abricate", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/abricate"}, {"uid": "github/tseemann/shovill", "html_url": "https://rseng.github.io/software/repository/github/tseemann/shovill", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/shovill"}, {"uid": "github/tseemann/VelvetOptimiser", "html_url": "https://rseng.github.io/software/repository/github/tseemann/VelvetOptimiser", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/VelvetOptimiser"}, {"uid": "github/tseemann/snippy", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snippy", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snippy"}, {"uid": "github/tseemann/snp-dists", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snp-dists", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snp-dists"}, {"uid": "github/tseemann/prokka", "html_url": "https://rseng.github.io/software/repository/github/tseemann/prokka", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/prokka"}, {"uid": "github/stevertaylor/gw_pta_emulator", "html_url": "https://rseng.github.io/software/repository/github/stevertaylor/gw_pta_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/stevertaylor/gw_pta_emulator"}, {"uid": "github/theosanderson/chronumental", "html_url": "https://rseng.github.io/software/repository/github/theosanderson/chronumental", "api_url": "https://rseng.github.io/software/api/repos/github/theosanderson/chronumental"}, {"uid": "github/NeuralEnsemble/PyNN", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/PyNN", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/PyNN"}, {"uid": "github/NeuralEnsemble/elephant", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/elephant", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/elephant"}, {"uid": "github/nla-group/fABBA", "html_url": "https://rseng.github.io/software/repository/github/nla-group/fABBA", "api_url": "https://rseng.github.io/software/api/repos/github/nla-group/fABBA"}, {"uid": "github/snfactory/binaryoffset", "html_url": "https://rseng.github.io/software/repository/github/snfactory/binaryoffset", "api_url": "https://rseng.github.io/software/api/repos/github/snfactory/binaryoffset"}, {"uid": "github/jonathansick/skyoffset", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/skyoffset", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/skyoffset"}, {"uid": "github/jonathansick/MoAstro", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/MoAstro", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/MoAstro"}, {"uid": "github/jonathansick/starfish", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/starfish"}, {"uid": "github/narunlifescience/runcircos-gui", "html_url": "https://rseng.github.io/software/repository/github/narunlifescience/runcircos-gui", "api_url": "https://rseng.github.io/software/api/repos/github/narunlifescience/runcircos-gui"}, {"uid": "github/cdalvaro/machine-learning-master-thesis", "html_url": "https://rseng.github.io/software/repository/github/cdalvaro/machine-learning-master-thesis", "api_url": "https://rseng.github.io/software/api/repos/github/cdalvaro/machine-learning-master-thesis"}, {"uid": "github/YesselmanLab/rna_map", "html_url": "https://rseng.github.io/software/repository/github/YesselmanLab/rna_map", "api_url": "https://rseng.github.io/software/api/repos/github/YesselmanLab/rna_map"}, {"uid": "github/mwalmsley/zoobot", "html_url": "https://rseng.github.io/software/repository/github/mwalmsley/zoobot", "api_url": "https://rseng.github.io/software/api/repos/github/mwalmsley/zoobot"}, {"uid": "github/joboog/r2ogs6", "html_url": "https://rseng.github.io/software/repository/github/joboog/r2ogs6", "api_url": "https://rseng.github.io/software/api/repos/github/joboog/r2ogs6"}, {"uid": "github/patscott/pippi", "html_url": "https://rseng.github.io/software/repository/github/patscott/pippi", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/pippi"}, {"uid": "github/patscott/gambit_1.3", "html_url": "https://rseng.github.io/software/repository/github/patscott/gambit_1.3", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/gambit_1.3"}, {"uid": "github/patscott/ddcalc", "html_url": "https://rseng.github.io/software/repository/github/patscott/ddcalc", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/ddcalc"}, {"uid": "github/martin3141/spant", "html_url": "https://rseng.github.io/software/repository/github/martin3141/spant", "api_url": "https://rseng.github.io/software/api/repos/github/martin3141/spant"}, {"uid": "github/viash-io/viash", "html_url": "https://rseng.github.io/software/repository/github/viash-io/viash", "api_url": "https://rseng.github.io/software/api/repos/github/viash-io/viash"}, {"uid": "github/Anirbancosmo/limpy", "html_url": "https://rseng.github.io/software/repository/github/Anirbancosmo/limpy", "api_url": "https://rseng.github.io/software/api/repos/github/Anirbancosmo/limpy"}, {"uid": "github/veragluscevic/dmdd", "html_url": "https://rseng.github.io/software/repository/github/veragluscevic/dmdd", "api_url": "https://rseng.github.io/software/api/repos/github/veragluscevic/dmdd"}, {"uid": "github/yanzhanglab/Graph2GO", "html_url": "https://rseng.github.io/software/repository/github/yanzhanglab/Graph2GO", "api_url": "https://rseng.github.io/software/api/repos/github/yanzhanglab/Graph2GO"}, {"uid": "github/SpectraCollab/ORMIR_XCT", "html_url": "https://rseng.github.io/software/repository/github/SpectraCollab/ORMIR_XCT", "api_url": "https://rseng.github.io/software/api/repos/github/SpectraCollab/ORMIR_XCT"}, {"uid": "github/deephyper/deephyper", "html_url": "https://rseng.github.io/software/repository/github/deephyper/deephyper", "api_url": "https://rseng.github.io/software/api/repos/github/deephyper/deephyper"}, {"uid": "github/donishadsmith/neurocaps", "html_url": "https://rseng.github.io/software/repository/github/donishadsmith/neurocaps", "api_url": "https://rseng.github.io/software/api/repos/github/donishadsmith/neurocaps"}, {"uid": "github/BradGreig/21CMMC", "html_url": "https://rseng.github.io/software/repository/github/BradGreig/21CMMC", "api_url": "https://rseng.github.io/software/api/repos/github/BradGreig/21CMMC"}, {"uid": "github/Ouranosinc/xclim", "html_url": "https://rseng.github.io/software/repository/github/Ouranosinc/xclim", "api_url": "https://rseng.github.io/software/api/repos/github/Ouranosinc/xclim"}, {"uid": "github/astroboylrx/Rubble", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/Rubble", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/Rubble"}, {"uid": "github/astroboylrx/PLAN", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/PLAN", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/PLAN"}, {"uid": "github/peterk87/sistr_cmd", "html_url": "https://rseng.github.io/software/repository/github/peterk87/sistr_cmd", "api_url": "https://rseng.github.io/software/api/repos/github/peterk87/sistr_cmd"}, {"uid": "github/daeken/Emokit", "html_url": "https://rseng.github.io/software/repository/github/daeken/Emokit", "api_url": "https://rseng.github.io/software/api/repos/github/daeken/Emokit"}, {"uid": "github/salbalkus/CausalTables.jl", "html_url": "https://rseng.github.io/software/repository/github/salbalkus/CausalTables.jl", "api_url": "https://rseng.github.io/software/api/repos/github/salbalkus/CausalTables.jl"}, {"uid": "github/ucl-exoplanets/ExoTETHyS", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoTETHyS", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoTETHyS"}, {"uid": "github/ucl-exoplanets/TauREx3_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/TauREx3_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/TauREx3_public"}, {"uid": "github/ucl-exoplanets/ExoGAN_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoGAN_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoGAN_public"}, {"uid": "github/ucl-exoplanets/pylightcurve", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/pylightcurve", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/pylightcurve"}, {"uid": "github/czbiohub-sf/Rapid-QC-MS", "html_url": "https://rseng.github.io/software/repository/github/czbiohub-sf/Rapid-QC-MS", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub-sf/Rapid-QC-MS"}, {"uid": "github/SJ001/AI-Feynman", "html_url": "https://rseng.github.io/software/repository/github/SJ001/AI-Feynman", "api_url": "https://rseng.github.io/software/api/repos/github/SJ001/AI-Feynman"}, {"uid": "github/mpievolbio-scicomp/cancer_sim", "html_url": "https://rseng.github.io/software/repository/github/mpievolbio-scicomp/cancer_sim", "api_url": "https://rseng.github.io/software/api/repos/github/mpievolbio-scicomp/cancer_sim"}, {"uid": "github/sandialabs/pvOps", "html_url": "https://rseng.github.io/software/repository/github/sandialabs/pvOps", "api_url": "https://rseng.github.io/software/api/repos/github/sandialabs/pvOps"}, {"uid": "github/linneas/condetri", "html_url": "https://rseng.github.io/software/repository/github/linneas/condetri", "api_url": "https://rseng.github.io/software/api/repos/github/linneas/condetri"}, {"uid": "github/camfort/fortran-src", "html_url": "https://rseng.github.io/software/repository/github/camfort/fortran-src", "api_url": "https://rseng.github.io/software/api/repos/github/camfort/fortran-src"}, {"uid": "github/linqs/psl", "html_url": "https://rseng.github.io/software/repository/github/linqs/psl", "api_url": "https://rseng.github.io/software/api/repos/github/linqs/psl"}, {"uid": "github/GalletFlorian/TATOO", "html_url": "https://rseng.github.io/software/repository/github/GalletFlorian/TATOO", "api_url": "https://rseng.github.io/software/api/repos/github/GalletFlorian/TATOO"}, {"uid": "github/CornellLabofOrnithology/auk", "html_url": "https://rseng.github.io/software/repository/github/CornellLabofOrnithology/auk", "api_url": "https://rseng.github.io/software/api/repos/github/CornellLabofOrnithology/auk"}, {"uid": "github/taehoryu/TDEmass", "html_url": "https://rseng.github.io/software/repository/github/taehoryu/TDEmass", "api_url": "https://rseng.github.io/software/api/repos/github/taehoryu/TDEmass"}, {"uid": "github/TeamNCMC/cuisto", "html_url": "https://rseng.github.io/software/repository/github/TeamNCMC/cuisto", "api_url": "https://rseng.github.io/software/api/repos/github/TeamNCMC/cuisto"}, {"uid": "github/MarcNeveu/IcyDwarf", "html_url": "https://rseng.github.io/software/repository/github/MarcNeveu/IcyDwarf", "api_url": "https://rseng.github.io/software/api/repos/github/MarcNeveu/IcyDwarf"}, {"uid": "github/tloredo/CUDAHM", "html_url": "https://rseng.github.io/software/repository/github/tloredo/CUDAHM", "api_url": "https://rseng.github.io/software/api/repos/github/tloredo/CUDAHM"}, {"uid": "github/matthiasfabry/spinOS", "html_url": "https://rseng.github.io/software/repository/github/matthiasfabry/spinOS", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasfabry/spinOS"}, {"uid": "github/j-faria/kima", "html_url": "https://rseng.github.io/software/repository/github/j-faria/kima", "api_url": "https://rseng.github.io/software/api/repos/github/j-faria/kima"}, {"uid": "github/ProSolo/prosolo", "html_url": "https://rseng.github.io/software/repository/github/ProSolo/prosolo", "api_url": "https://rseng.github.io/software/api/repos/github/ProSolo/prosolo"}, {"uid": "github/smirik/resonances", "html_url": "https://rseng.github.io/software/repository/github/smirik/resonances", "api_url": "https://rseng.github.io/software/api/repos/github/smirik/resonances"}, {"uid": "github/mkenworthy/exorings", "html_url": "https://rseng.github.io/software/repository/github/mkenworthy/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/mkenworthy/exorings"}, {"uid": "github/MolecularAI/DockStreamCommunity", "html_url": "https://rseng.github.io/software/repository/github/MolecularAI/DockStreamCommunity", "api_url": "https://rseng.github.io/software/api/repos/github/MolecularAI/DockStreamCommunity"}, {"uid": "github/molgenis/graph2vr", "html_url": "https://rseng.github.io/software/repository/github/molgenis/graph2vr", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/graph2vr"}, {"uid": "github/molgenis/vibe-suppl", "html_url": "https://rseng.github.io/software/repository/github/molgenis/vibe-suppl", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/vibe-suppl"}, {"uid": "github/ArgonneCPAC/diffstar", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffstar", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffstar"}, {"uid": "github/ArgonneCPAC/dsps", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/dsps", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/dsps"}, {"uid": "github/ArgonneCPAC/diffmah", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffmah", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffmah"}, {"uid": "github/Leo-Simpson/c-lasso", "html_url": "https://rseng.github.io/software/repository/github/Leo-Simpson/c-lasso", "api_url": "https://rseng.github.io/software/api/repos/github/Leo-Simpson/c-lasso"}, {"uid": "github/nialov/fractopo", "html_url": "https://rseng.github.io/software/repository/github/nialov/fractopo", "api_url": "https://rseng.github.io/software/api/repos/github/nialov/fractopo"}, {"uid": "github/icesat2py/icepyx", "html_url": "https://rseng.github.io/software/repository/github/icesat2py/icepyx", "api_url": "https://rseng.github.io/software/api/repos/github/icesat2py/icepyx"}, {"uid": "github/IMB-Computational-Genomics-Lab/scGPS", "html_url": "https://rseng.github.io/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", "api_url": "https://rseng.github.io/software/api/repos/github/IMB-Computational-Genomics-Lab/scGPS"}, {"uid": "github/surhh/nfitsview", "html_url": "https://rseng.github.io/software/repository/github/surhh/nfitsview", "api_url": "https://rseng.github.io/software/api/repos/github/surhh/nfitsview"}, {"uid": "github/chianti-atomic/ChiantiPy", "html_url": "https://rseng.github.io/software/repository/github/chianti-atomic/ChiantiPy", "api_url": "https://rseng.github.io/software/api/repos/github/chianti-atomic/ChiantiPy"}, {"uid": "github/mariakotouza/TRIP-Tool", "html_url": "https://rseng.github.io/software/repository/github/mariakotouza/TRIP-Tool", "api_url": "https://rseng.github.io/software/api/repos/github/mariakotouza/TRIP-Tool"}, {"uid": "github/imperialchem/mrd-demo", "html_url": "https://rseng.github.io/software/repository/github/imperialchem/mrd-demo", "api_url": "https://rseng.github.io/software/api/repos/github/imperialchem/mrd-demo"}, {"uid": "github/SamDuffield/bmm", "html_url": "https://rseng.github.io/software/repository/github/SamDuffield/bmm", "api_url": "https://rseng.github.io/software/api/repos/github/SamDuffield/bmm"}, {"uid": "github/timkartar/RNAscape", "html_url": "https://rseng.github.io/software/repository/github/timkartar/RNAscape", "api_url": "https://rseng.github.io/software/api/repos/github/timkartar/RNAscape"}, {"uid": "github/SGpp/DisCoTec", "html_url": "https://rseng.github.io/software/repository/github/SGpp/DisCoTec", "api_url": "https://rseng.github.io/software/api/repos/github/SGpp/DisCoTec"}, {"uid": "github/abhisrkckl/Vela.jl", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/Vela.jl", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/Vela.jl"}, {"uid": "github/abhisrkckl/GWecc", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/GWecc", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/GWecc"}, {"uid": "github/projectcuisines/thai_trilogy_code", "html_url": "https://rseng.github.io/software/repository/github/projectcuisines/thai_trilogy_code", "api_url": "https://rseng.github.io/software/api/repos/github/projectcuisines/thai_trilogy_code"}, {"uid": "github/saeyslab/CytoNorm_Figures", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/CytoNorm_Figures", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/CytoNorm_Figures"}, {"uid": "github/saeyslab/nichenetr", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/nichenetr", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/nichenetr"}, {"uid": "github/saeyslab/PeacoQC", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/PeacoQC", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/PeacoQC"}, {"uid": "github/christopher-vollmers/C3POa", "html_url": "https://rseng.github.io/software/repository/github/christopher-vollmers/C3POa", "api_url": "https://rseng.github.io/software/api/repos/github/christopher-vollmers/C3POa"}, {"uid": "github/inigozubeldia/cosmocnc", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/cosmocnc", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/cosmocnc"}, {"uid": "github/inigozubeldia/szifi", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/szifi", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/szifi"}, {"uid": "github/dokester/BayesicFitting", "html_url": "https://rseng.github.io/software/repository/github/dokester/BayesicFitting", "api_url": "https://rseng.github.io/software/api/repos/github/dokester/BayesicFitting"}, {"uid": "github/OpenQuantumComputing/quantumreservoirpy", "html_url": "https://rseng.github.io/software/repository/github/OpenQuantumComputing/quantumreservoirpy", "api_url": "https://rseng.github.io/software/api/repos/github/OpenQuantumComputing/quantumreservoirpy"}, {"uid": "github/MetaboComp/TriplotGUI", "html_url": "https://rseng.github.io/software/repository/github/MetaboComp/TriplotGUI", "api_url": "https://rseng.github.io/software/api/repos/github/MetaboComp/TriplotGUI"}, {"uid": "github/genome/somatic-sniper", "html_url": "https://rseng.github.io/software/repository/github/genome/somatic-sniper", "api_url": "https://rseng.github.io/software/api/repos/github/genome/somatic-sniper"}, {"uid": "github/genome/bam-readcount", "html_url": "https://rseng.github.io/software/repository/github/genome/bam-readcount", "api_url": "https://rseng.github.io/software/api/repos/github/genome/bam-readcount"}, {"uid": "github/matthewholman/assist", "html_url": "https://rseng.github.io/software/repository/github/matthewholman/assist", "api_url": "https://rseng.github.io/software/api/repos/github/matthewholman/assist"}, {"uid": "github/spiketools/spiketools", "html_url": "https://rseng.github.io/software/repository/github/spiketools/spiketools", "api_url": "https://rseng.github.io/software/api/repos/github/spiketools/spiketools"}, {"uid": "github/christinahedges/contaminante", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/contaminante", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/contaminante"}, {"uid": "github/christinahedges/TESS-SIP", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/TESS-SIP", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/TESS-SIP"}, {"uid": "github/msailer1234/JWST_Simulation", "html_url": "https://rseng.github.io/software/repository/github/msailer1234/JWST_Simulation", "api_url": "https://rseng.github.io/software/api/repos/github/msailer1234/JWST_Simulation"}, {"uid": "github/USU-Analytics-Solution-Center/Bruno.jl", "html_url": "https://rseng.github.io/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", "api_url": "https://rseng.github.io/software/api/repos/github/USU-Analytics-Solution-Center/Bruno.jl"}, {"uid": "github/ocean-eddy-cpt/gcm-filters", "html_url": "https://rseng.github.io/software/repository/github/ocean-eddy-cpt/gcm-filters", "api_url": "https://rseng.github.io/software/api/repos/github/ocean-eddy-cpt/gcm-filters"}, {"uid": "github/hippke/pulses", "html_url": "https://rseng.github.io/software/repository/github/hippke/pulses", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pulses"}, {"uid": "github/hippke/tls", "html_url": "https://rseng.github.io/software/repository/github/hippke/tls", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/tls"}, {"uid": "github/hippke/pandora", "html_url": "https://rseng.github.io/software/repository/github/hippke/pandora", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pandora"}, {"uid": "github/hippke/PyOSE", "html_url": "https://rseng.github.io/software/repository/github/hippke/PyOSE", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/PyOSE"}, {"uid": "github/hippke/communication", "html_url": "https://rseng.github.io/software/repository/github/hippke/communication", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/communication"}, {"uid": "github/hippke/wotan", "html_url": "https://rseng.github.io/software/repository/github/hippke/wotan", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/wotan"}, {"uid": "github/schmidtfa/pyrasa", "html_url": "https://rseng.github.io/software/repository/github/schmidtfa/pyrasa", "api_url": "https://rseng.github.io/software/api/repos/github/schmidtfa/pyrasa"}, {"uid": "github/horvatovichlab/MSIWarp", "html_url": "https://rseng.github.io/software/repository/github/horvatovichlab/MSIWarp", "api_url": "https://rseng.github.io/software/api/repos/github/horvatovichlab/MSIWarp"}, {"uid": "github/mcsiple/mmrefpoints", "html_url": "https://rseng.github.io/software/repository/github/mcsiple/mmrefpoints", "api_url": "https://rseng.github.io/software/api/repos/github/mcsiple/mmrefpoints"}, {"uid": "github/druglogics/pydruglogics", "html_url": "https://rseng.github.io/software/repository/github/druglogics/pydruglogics", "api_url": "https://rseng.github.io/software/api/repos/github/druglogics/pydruglogics"}, {"uid": "github/djgroen/MPWide", "html_url": "https://rseng.github.io/software/repository/github/djgroen/MPWide", "api_url": "https://rseng.github.io/software/api/repos/github/djgroen/MPWide"}, {"uid": "github/voutcn/megahit", "html_url": "https://rseng.github.io/software/repository/github/voutcn/megahit", "api_url": "https://rseng.github.io/software/api/repos/github/voutcn/megahit"}, {"uid": "github/taoliu/MACS", "html_url": "https://rseng.github.io/software/repository/github/taoliu/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/taoliu/MACS"}, {"uid": "github/AUTODIAL/AutoEIS", "html_url": "https://rseng.github.io/software/repository/github/AUTODIAL/AutoEIS", "api_url": "https://rseng.github.io/software/api/repos/github/AUTODIAL/AutoEIS"}, {"uid": "github/mes5k/amap-align", "html_url": "https://rseng.github.io/software/repository/github/mes5k/amap-align", "api_url": "https://rseng.github.io/software/api/repos/github/mes5k/amap-align"}, {"uid": "github/brian-lau/MatlabAUC", "html_url": "https://rseng.github.io/software/repository/github/brian-lau/MatlabAUC", "api_url": "https://rseng.github.io/software/api/repos/github/brian-lau/MatlabAUC"}, {"uid": "github/arhstevens/DarkSage", "html_url": "https://rseng.github.io/software/repository/github/arhstevens/DarkSage", "api_url": "https://rseng.github.io/software/api/repos/github/arhstevens/DarkSage"}, {"uid": "github/ctkelley/MultiPrecisionArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/ctkelley/MultiPrecisionArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ctkelley/MultiPrecisionArrays.jl"}, {"uid": "github/DaymudeLab/assembly-theory", "html_url": "https://rseng.github.io/software/repository/github/DaymudeLab/assembly-theory", "api_url": "https://rseng.github.io/software/api/repos/github/DaymudeLab/assembly-theory"}, {"uid": "github/mwaskom/seaborn", "html_url": "https://rseng.github.io/software/repository/github/mwaskom/seaborn", "api_url": "https://rseng.github.io/software/api/repos/github/mwaskom/seaborn"}, {"uid": "github/trevisanj/PFANT", "html_url": "https://rseng.github.io/software/repository/github/trevisanj/PFANT", "api_url": "https://rseng.github.io/software/api/repos/github/trevisanj/PFANT"}, {"uid": "github/mikecokina/elisa", "html_url": "https://rseng.github.io/software/repository/github/mikecokina/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/mikecokina/elisa"}, {"uid": "github/MyWebIntelligence/MyWebIntelligencePython", "html_url": "https://rseng.github.io/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", "api_url": "https://rseng.github.io/software/api/repos/github/MyWebIntelligence/MyWebIntelligencePython"}, {"uid": "github/freelawproject/eyecite", "html_url": "https://rseng.github.io/software/repository/github/freelawproject/eyecite", "api_url": "https://rseng.github.io/software/api/repos/github/freelawproject/eyecite"}, {"uid": "github/scwatts/fastspar", "html_url": "https://rseng.github.io/software/repository/github/scwatts/fastspar", "api_url": "https://rseng.github.io/software/api/repos/github/scwatts/fastspar"}, {"uid": "github/AlidesChimin/SATA", "html_url": "https://rseng.github.io/software/repository/github/AlidesChimin/SATA", "api_url": "https://rseng.github.io/software/api/repos/github/AlidesChimin/SATA"}, {"uid": "github/nebblu/ReACT", "html_url": "https://rseng.github.io/software/repository/github/nebblu/ReACT", "api_url": "https://rseng.github.io/software/api/repos/github/nebblu/ReACT"}, {"uid": "github/HWang-Summit/HCGrid", "html_url": "https://rseng.github.io/software/repository/github/HWang-Summit/HCGrid", "api_url": "https://rseng.github.io/software/api/repos/github/HWang-Summit/HCGrid"}, {"uid": "github/studla/RYUTO", "html_url": "https://rseng.github.io/software/repository/github/studla/RYUTO", "api_url": "https://rseng.github.io/software/api/repos/github/studla/RYUTO"}, {"uid": "github/D4san/MultiREx-public", "html_url": "https://rseng.github.io/software/repository/github/D4san/MultiREx-public", "api_url": "https://rseng.github.io/software/api/repos/github/D4san/MultiREx-public"}, {"uid": "github/aomlomics/tourmaline", "html_url": "https://rseng.github.io/software/repository/github/aomlomics/tourmaline", "api_url": "https://rseng.github.io/software/api/repos/github/aomlomics/tourmaline"}, {"uid": "github/marbl/Winnowmap", "html_url": "https://rseng.github.io/software/repository/github/marbl/Winnowmap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Winnowmap"}, {"uid": "github/marbl/Mash", "html_url": "https://rseng.github.io/software/repository/github/marbl/Mash", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Mash"}, {"uid": "github/marbl/MashMap", "html_url": "https://rseng.github.io/software/repository/github/marbl/MashMap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/MashMap"}, {"uid": "github/marbl/Krona", "html_url": "https://rseng.github.io/software/repository/github/marbl/Krona", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Krona"}, {"uid": "github/vallis/mc3pta", "html_url": "https://rseng.github.io/software/repository/github/vallis/mc3pta", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/mc3pta"}, {"uid": "github/vallis/libstempo", "html_url": "https://rseng.github.io/software/repository/github/vallis/libstempo", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/libstempo"}, {"uid": "github/kno10/python-kmedoids", "html_url": "https://rseng.github.io/software/repository/github/kno10/python-kmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/kno10/python-kmedoids"}, {"uid": "github/DrafProject/elmada", "html_url": "https://rseng.github.io/software/repository/github/DrafProject/elmada", "api_url": "https://rseng.github.io/software/api/repos/github/DrafProject/elmada"}, {"uid": "github/siavashk/pycpd", "html_url": "https://rseng.github.io/software/repository/github/siavashk/pycpd", "api_url": "https://rseng.github.io/software/api/repos/github/siavashk/pycpd"}, {"uid": "github/spectralcode/OCTproZ", "html_url": "https://rseng.github.io/software/repository/github/spectralcode/OCTproZ", "api_url": "https://rseng.github.io/software/api/repos/github/spectralcode/OCTproZ"}, {"uid": "github/4dn-dcic/pairix", "html_url": "https://rseng.github.io/software/repository/github/4dn-dcic/pairix", "api_url": "https://rseng.github.io/software/api/repos/github/4dn-dcic/pairix"}, {"uid": "github/SCIInstitute/UncertainSCI", "html_url": "https://rseng.github.io/software/repository/github/SCIInstitute/UncertainSCI", "api_url": "https://rseng.github.io/software/api/repos/github/SCIInstitute/UncertainSCI"}, {"uid": "github/nitadori/SCF-FDPS", "html_url": "https://rseng.github.io/software/repository/github/nitadori/SCF-FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/nitadori/SCF-FDPS"}, {"uid": "github/microplastics-cluster/fragment-mnp", "html_url": "https://rseng.github.io/software/repository/github/microplastics-cluster/fragment-mnp", "api_url": "https://rseng.github.io/software/api/repos/github/microplastics-cluster/fragment-mnp"}, {"uid": "github/james-m-osborn/astrosat", "html_url": "https://rseng.github.io/software/repository/github/james-m-osborn/astrosat", "api_url": "https://rseng.github.io/software/api/repos/github/james-m-osborn/astrosat"}, {"uid": "github/cedrus-opensource/pyxid", "html_url": "https://rseng.github.io/software/repository/github/cedrus-opensource/pyxid", "api_url": "https://rseng.github.io/software/api/repos/github/cedrus-opensource/pyxid"}, {"uid": "github/WilliamLwj/PyXAB", "html_url": "https://rseng.github.io/software/repository/github/WilliamLwj/PyXAB", "api_url": "https://rseng.github.io/software/api/repos/github/WilliamLwj/PyXAB"}, {"uid": "github/geza-kovacs/tran_k2", "html_url": "https://rseng.github.io/software/repository/github/geza-kovacs/tran_k2", "api_url": "https://rseng.github.io/software/api/repos/github/geza-kovacs/tran_k2"}, {"uid": "github/jianghuaijie/scLRTC", "html_url": "https://rseng.github.io/software/repository/github/jianghuaijie/scLRTC", "api_url": "https://rseng.github.io/software/api/repos/github/jianghuaijie/scLRTC"}, {"uid": "github/lmwalkowicz/Cheetah", "html_url": "https://rseng.github.io/software/repository/github/lmwalkowicz/Cheetah", "api_url": "https://rseng.github.io/software/api/repos/github/lmwalkowicz/Cheetah"}, {"uid": "github/vincentvaneylen/k2photometry", "html_url": "https://rseng.github.io/software/repository/github/vincentvaneylen/k2photometry", "api_url": "https://rseng.github.io/software/api/repos/github/vincentvaneylen/k2photometry"}, {"uid": "github/MP-Gadget/bigfile", "html_url": "https://rseng.github.io/software/repository/github/MP-Gadget/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/MP-Gadget/bigfile"}, {"uid": "github/candYgene/siga", "html_url": "https://rseng.github.io/software/repository/github/candYgene/siga", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/siga"}, {"uid": "github/candYgene/abg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/abg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/abg-ld"}, {"uid": "github/candYgene/QTM", "html_url": "https://rseng.github.io/software/repository/github/candYgene/QTM", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/QTM"}, {"uid": "github/candYgene/pbg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/pbg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/pbg-ld"}, {"uid": "github/jgieseler/solarmach", "html_url": "https://rseng.github.io/software/repository/github/jgieseler/solarmach", "api_url": "https://rseng.github.io/software/api/repos/github/jgieseler/solarmach"}, {"uid": "github/MegaMorph/galapagos-c", "html_url": "https://rseng.github.io/software/repository/github/MegaMorph/galapagos-c", "api_url": "https://rseng.github.io/software/api/repos/github/MegaMorph/galapagos-c"}, {"uid": "github/sfeeney/hh0", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/hh0", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/hh0"}, {"uid": "github/sfeeney/ddspectra", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/ddspectra", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/ddspectra"}, {"uid": "github/sxs-collaboration/spectre", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/spectre", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/spectre"}, {"uid": "github/sxs-collaboration/gwsurrogate", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/gwsurrogate", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/gwsurrogate"}, {"uid": "github/gtw2i/GA-Galaxy", "html_url": "https://rseng.github.io/software/repository/github/gtw2i/GA-Galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/gtw2i/GA-Galaxy"}, {"uid": "github/ekaterinailin/AltaiPony", "html_url": "https://rseng.github.io/software/repository/github/ekaterinailin/AltaiPony", "api_url": "https://rseng.github.io/software/api/repos/github/ekaterinailin/AltaiPony"}, {"uid": "github/sciris/sciris", "html_url": "https://rseng.github.io/software/repository/github/sciris/sciris", "api_url": "https://rseng.github.io/software/api/repos/github/sciris/sciris"}, {"uid": "github/PyLops/pylops-mpi", "html_url": "https://rseng.github.io/software/repository/github/PyLops/pylops-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/PyLops/pylops-mpi"}, {"uid": "github/frescigno/magpy_rv", "html_url": "https://rseng.github.io/software/repository/github/frescigno/magpy_rv", "api_url": "https://rseng.github.io/software/api/repos/github/frescigno/magpy_rv"}, {"uid": "github/anuwu/DAGN-Blindtest", "html_url": "https://rseng.github.io/software/repository/github/anuwu/DAGN-Blindtest", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/DAGN-Blindtest"}, {"uid": "github/anuwu/GOTHIC", "html_url": "https://rseng.github.io/software/repository/github/anuwu/GOTHIC", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/GOTHIC"}, {"uid": "github/jfalconbarroso/BAYES-LOSVD", "html_url": "https://rseng.github.io/software/repository/github/jfalconbarroso/BAYES-LOSVD", "api_url": "https://rseng.github.io/software/api/repos/github/jfalconbarroso/BAYES-LOSVD"}, {"uid": "github/TravisWheelerLab/VIBES", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/VIBES", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/VIBES"}, {"uid": "github/TravisWheelerLab/NINJA", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/NINJA", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/NINJA"}, {"uid": "github/gadomski/antimeridian", "html_url": "https://rseng.github.io/software/repository/github/gadomski/antimeridian", "api_url": "https://rseng.github.io/software/api/repos/github/gadomski/antimeridian"}, {"uid": "github/erf-model/ERF", "html_url": "https://rseng.github.io/software/repository/github/erf-model/ERF", "api_url": "https://rseng.github.io/software/api/repos/github/erf-model/ERF"}, {"uid": "github/phenomecentre/nPYc-Toolbox", "html_url": "https://rseng.github.io/software/repository/github/phenomecentre/nPYc-Toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/phenomecentre/nPYc-Toolbox"}, {"uid": "github/witseie/fpgaperm", "html_url": "https://rseng.github.io/software/repository/github/witseie/fpgaperm", "api_url": "https://rseng.github.io/software/api/repos/github/witseie/fpgaperm"}, {"uid": "github/Santiso-Group/despasito", "html_url": "https://rseng.github.io/software/repository/github/Santiso-Group/despasito", "api_url": "https://rseng.github.io/software/api/repos/github/Santiso-Group/despasito"}, {"uid": "github/Shamrock-code/Shamrock", "html_url": "https://rseng.github.io/software/repository/github/Shamrock-code/Shamrock", "api_url": "https://rseng.github.io/software/api/repos/github/Shamrock-code/Shamrock"}, {"uid": "github/songweizhi/Binning_refiner", "html_url": "https://rseng.github.io/software/repository/github/songweizhi/Binning_refiner", "api_url": "https://rseng.github.io/software/api/repos/github/songweizhi/Binning_refiner"}, {"uid": "github/MichaelCretignier/Rassine_public", "html_url": "https://rseng.github.io/software/repository/github/MichaelCretignier/Rassine_public", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelCretignier/Rassine_public"}, {"uid": "github/barklem/kaulakys", "html_url": "https://rseng.github.io/software/repository/github/barklem/kaulakys", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/kaulakys"}, {"uid": "github/barklem/abo-cross", "html_url": "https://rseng.github.io/software/repository/github/barklem/abo-cross", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/abo-cross"}, {"uid": "github/barklem/mswavef", "html_url": "https://rseng.github.io/software/repository/github/barklem/mswavef", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/mswavef"}, {"uid": "github/barklem/hlinop", "html_url": "https://rseng.github.io/software/repository/github/barklem/hlinop", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/hlinop"}, {"uid": "github/tool-bin/ukbcc", "html_url": "https://rseng.github.io/software/repository/github/tool-bin/ukbcc", "api_url": "https://rseng.github.io/software/api/repos/github/tool-bin/ukbcc"}, {"uid": "github/michalc/OpenTTDLab", "html_url": "https://rseng.github.io/software/repository/github/michalc/OpenTTDLab", "api_url": "https://rseng.github.io/software/api/repos/github/michalc/OpenTTDLab"}, {"uid": "github/mh-skjelvareid/synaptus", "html_url": "https://rseng.github.io/software/repository/github/mh-skjelvareid/synaptus", "api_url": "https://rseng.github.io/software/api/repos/github/mh-skjelvareid/synaptus"}, {"uid": "github/caimeng2/seesus", "html_url": "https://rseng.github.io/software/repository/github/caimeng2/seesus", "api_url": "https://rseng.github.io/software/api/repos/github/caimeng2/seesus"}, {"uid": "github/cbalbin-FIU/Epitopedia", "html_url": "https://rseng.github.io/software/repository/github/cbalbin-FIU/Epitopedia", "api_url": "https://rseng.github.io/software/api/repos/github/cbalbin-FIU/Epitopedia"}, {"uid": "github/Razumovskyy/MARFA", "html_url": "https://rseng.github.io/software/repository/github/Razumovskyy/MARFA", "api_url": "https://rseng.github.io/software/api/repos/github/Razumovskyy/MARFA"}, {"uid": "github/i4Ds/Karabo-Pipeline", "html_url": "https://rseng.github.io/software/repository/github/i4Ds/Karabo-Pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/i4Ds/Karabo-Pipeline"}, {"uid": "github/alexji/LESSPayne", "html_url": "https://rseng.github.io/software/repository/github/alexji/LESSPayne", "api_url": "https://rseng.github.io/software/api/repos/github/alexji/LESSPayne"}, {"uid": "github/WelbornGroup/ELECTRIC", "html_url": "https://rseng.github.io/software/repository/github/WelbornGroup/ELECTRIC", "api_url": "https://rseng.github.io/software/api/repos/github/WelbornGroup/ELECTRIC"}, {"uid": "github/mlower/rmnest", "html_url": "https://rseng.github.io/software/repository/github/mlower/rmnest", "api_url": "https://rseng.github.io/software/api/repos/github/mlower/rmnest"}, {"uid": "github/mscaudill/openseize", "html_url": "https://rseng.github.io/software/repository/github/mscaudill/openseize", "api_url": "https://rseng.github.io/software/api/repos/github/mscaudill/openseize"}, {"uid": "github/markur4/plotastic", "html_url": "https://rseng.github.io/software/repository/github/markur4/plotastic", "api_url": "https://rseng.github.io/software/api/repos/github/markur4/plotastic"}, {"uid": "github/VirtualPlantLab/PlantSimEngine.jl", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlantLab/PlantSimEngine.jl"}, {"uid": "github/FDPS/FDPS", "html_url": "https://rseng.github.io/software/repository/github/FDPS/FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/FDPS/FDPS"}, {"uid": "github/cellgeni/cells2visium", "html_url": "https://rseng.github.io/software/repository/github/cellgeni/cells2visium", "api_url": "https://rseng.github.io/software/api/repos/github/cellgeni/cells2visium"}, {"uid": "github/UM-KevinHe/surtvep", "html_url": "https://rseng.github.io/software/repository/github/UM-KevinHe/surtvep", "api_url": "https://rseng.github.io/software/api/repos/github/UM-KevinHe/surtvep"}, {"uid": "github/NIFTy-PPL/JAXbind", "html_url": "https://rseng.github.io/software/repository/github/NIFTy-PPL/JAXbind", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTy-PPL/JAXbind"}, {"uid": "github/casasglobal-org/psymple", "html_url": "https://rseng.github.io/software/repository/github/casasglobal-org/psymple", "api_url": "https://rseng.github.io/software/api/repos/github/casasglobal-org/psymple"}, {"uid": "github/PdIPS/CBX", "html_url": "https://rseng.github.io/software/repository/github/PdIPS/CBX", "api_url": "https://rseng.github.io/software/api/repos/github/PdIPS/CBX"}, {"uid": "github/rrwick/Filtlong", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Filtlong", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Filtlong"}, {"uid": "github/rrwick/Deepbinner", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Deepbinner", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Deepbinner"}, {"uid": "github/rrwick/Bandage", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Bandage", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Bandage"}, {"uid": "github/rrwick/Unicycler", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Unicycler", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Unicycler"}, {"uid": "github/rrwick/Porechop", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Porechop", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Porechop"}, {"uid": "github/cumbof/honto", "html_url": "https://rseng.github.io/software/repository/github/cumbof/honto", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/honto"}, {"uid": "github/cumbof/MetaSBT-DBs", "html_url": "https://rseng.github.io/software/repository/github/cumbof/MetaSBT-DBs", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/MetaSBT-DBs"}, {"uid": "github/xdqso/xdqso", "html_url": "https://rseng.github.io/software/repository/github/xdqso/xdqso", "api_url": "https://rseng.github.io/software/api/repos/github/xdqso/xdqso"}, {"uid": "github/mgalardini/pyseer", "html_url": "https://rseng.github.io/software/repository/github/mgalardini/pyseer", "api_url": "https://rseng.github.io/software/api/repos/github/mgalardini/pyseer"}, {"uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", "html_url": "https://rseng.github.io/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", "api_url": "https://rseng.github.io/software/api/repos/github/ismael-mendoza/ShapeMeasurementFisherFormalism"}, {"uid": "github/akikuno/cstag", "html_url": "https://rseng.github.io/software/repository/github/akikuno/cstag", "api_url": "https://rseng.github.io/software/api/repos/github/akikuno/cstag"}, {"uid": "github/GeomScale/volesti", "html_url": "https://rseng.github.io/software/repository/github/GeomScale/volesti", "api_url": "https://rseng.github.io/software/api/repos/github/GeomScale/volesti"}, {"uid": "github/C2SM-RCM/emiproc", "html_url": "https://rseng.github.io/software/repository/github/C2SM-RCM/emiproc", "api_url": "https://rseng.github.io/software/api/repos/github/C2SM-RCM/emiproc"}, {"uid": "github/songningqiang/CosmoLED", "html_url": "https://rseng.github.io/software/repository/github/songningqiang/CosmoLED", "api_url": "https://rseng.github.io/software/api/repos/github/songningqiang/CosmoLED"}, {"uid": "github/phil-mansfield/shellfish", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/shellfish", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/shellfish"}, {"uid": "github/phil-mansfield/gotetra", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/gotetra", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/gotetra"}, {"uid": "github/ismaelpessa/PyMUSE", "html_url": "https://rseng.github.io/software/repository/github/ismaelpessa/PyMUSE", "api_url": "https://rseng.github.io/software/api/repos/github/ismaelpessa/PyMUSE"}, {"uid": "github/puregome/notebooks", "html_url": "https://rseng.github.io/software/repository/github/puregome/notebooks", "api_url": "https://rseng.github.io/software/api/repos/github/puregome/notebooks"}, {"uid": "github/Cristianetaniguti/Reads2Map", "html_url": "https://rseng.github.io/software/repository/github/Cristianetaniguti/Reads2Map", "api_url": "https://rseng.github.io/software/api/repos/github/Cristianetaniguti/Reads2Map"}, {"uid": "github/kehrlab/PopDel", "html_url": "https://rseng.github.io/software/repository/github/kehrlab/PopDel", "api_url": "https://rseng.github.io/software/api/repos/github/kehrlab/PopDel"}, {"uid": "github/galsci/pysm", "html_url": "https://rseng.github.io/software/repository/github/galsci/pysm", "api_url": "https://rseng.github.io/software/api/repos/github/galsci/pysm"}, {"uid": "github/rychallener/ThERESA", "html_url": "https://rseng.github.io/software/repository/github/rychallener/ThERESA", "api_url": "https://rseng.github.io/software/api/repos/github/rychallener/ThERESA"}, {"uid": "github/justinread/gravsphere", "html_url": "https://rseng.github.io/software/repository/github/justinread/gravsphere", "api_url": "https://rseng.github.io/software/api/repos/github/justinread/gravsphere"}, {"uid": "github/jeschaef/Graph4Med", "html_url": "https://rseng.github.io/software/repository/github/jeschaef/Graph4Med", "api_url": "https://rseng.github.io/software/api/repos/github/jeschaef/Graph4Med"}, {"uid": "github/linnarsson-lab/loompy", "html_url": "https://rseng.github.io/software/repository/github/linnarsson-lab/loompy", "api_url": "https://rseng.github.io/software/api/repos/github/linnarsson-lab/loompy"}, {"uid": "github/ankushaggarwal/pymecht", "html_url": "https://rseng.github.io/software/repository/github/ankushaggarwal/pymecht", "api_url": "https://rseng.github.io/software/api/repos/github/ankushaggarwal/pymecht"}, {"uid": "github/TNEL-UCSD/autolfads-deploy", "html_url": "https://rseng.github.io/software/repository/github/TNEL-UCSD/autolfads-deploy", "api_url": "https://rseng.github.io/software/api/repos/github/TNEL-UCSD/autolfads-deploy"}, {"uid": "github/RussellJurek/busy-function-fitting", "html_url": "https://rseng.github.io/software/repository/github/RussellJurek/busy-function-fitting", "api_url": "https://rseng.github.io/software/api/repos/github/RussellJurek/busy-function-fitting"}, {"uid": "github/MIAnalyzer/MIA", "html_url": "https://rseng.github.io/software/repository/github/MIAnalyzer/MIA", "api_url": "https://rseng.github.io/software/api/repos/github/MIAnalyzer/MIA"}, {"uid": "github/hongwanliu/DarkHistory", "html_url": "https://rseng.github.io/software/repository/github/hongwanliu/DarkHistory", "api_url": "https://rseng.github.io/software/api/repos/github/hongwanliu/DarkHistory"}, {"uid": "github/genomicepidemiology/ARGprofiler", "html_url": "https://rseng.github.io/software/repository/github/genomicepidemiology/ARGprofiler", "api_url": "https://rseng.github.io/software/api/repos/github/genomicepidemiology/ARGprofiler"}, {"uid": "github/brackham/speclib", "html_url": "https://rseng.github.io/software/repository/github/brackham/speclib", "api_url": "https://rseng.github.io/software/api/repos/github/brackham/speclib"}, {"uid": "github/adrn/schwimmbad", "html_url": "https://rseng.github.io/software/repository/github/adrn/schwimmbad", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/schwimmbad"}, {"uid": "github/adrn/pyia", "html_url": "https://rseng.github.io/software/repository/github/adrn/pyia", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/pyia"}, {"uid": "github/adrn/SuperFreq", "html_url": "https://rseng.github.io/software/repository/github/adrn/SuperFreq", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/SuperFreq"}, {"uid": "github/ialopezt/GalLenspy", "html_url": "https://rseng.github.io/software/repository/github/ialopezt/GalLenspy", "api_url": "https://rseng.github.io/software/api/repos/github/ialopezt/GalLenspy"}, {"uid": "github/DeepMIALab/UC-NfNet", "html_url": "https://rseng.github.io/software/repository/github/DeepMIALab/UC-NfNet", "api_url": "https://rseng.github.io/software/api/repos/github/DeepMIALab/UC-NfNet"}, {"uid": "github/starkit/wsynphot", "html_url": "https://rseng.github.io/software/repository/github/starkit/wsynphot", "api_url": "https://rseng.github.io/software/api/repos/github/starkit/wsynphot"}, {"uid": "github/oorb/oorb", "html_url": "https://rseng.github.io/software/repository/github/oorb/oorb", "api_url": "https://rseng.github.io/software/api/repos/github/oorb/oorb"}, {"uid": "github/munich-quantum-toolkit/core", "html_url": "https://rseng.github.io/software/repository/github/munich-quantum-toolkit/core", "api_url": "https://rseng.github.io/software/api/repos/github/munich-quantum-toolkit/core"}, {"uid": "github/evolbioinfo/bdei", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdei", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdei"}, {"uid": "github/evolbioinfo/treesimulator", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/treesimulator", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/treesimulator"}, {"uid": "github/evolbioinfo/bdct", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdct", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdct"}, {"uid": "github/evolbioinfo/bdpn", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdpn", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdpn"}, {"uid": "github/noatgnu/catapult", "html_url": "https://rseng.github.io/software/repository/github/noatgnu/catapult", "api_url": "https://rseng.github.io/software/api/repos/github/noatgnu/catapult"}, {"uid": "github/neuralgraphs/diman", "html_url": "https://rseng.github.io/software/repository/github/neuralgraphs/diman", "api_url": "https://rseng.github.io/software/api/repos/github/neuralgraphs/diman"}, {"uid": "github/jtksai/PyCOOL", "html_url": "https://rseng.github.io/software/repository/github/jtksai/PyCOOL", "api_url": "https://rseng.github.io/software/api/repos/github/jtksai/PyCOOL"}, {"uid": "github/Theano/Theano", "html_url": "https://rseng.github.io/software/repository/github/Theano/Theano", "api_url": "https://rseng.github.io/software/api/repos/github/Theano/Theano"}, {"uid": "github/levuvietphong/pyTCR", "html_url": "https://rseng.github.io/software/repository/github/levuvietphong/pyTCR", "api_url": "https://rseng.github.io/software/api/repos/github/levuvietphong/pyTCR"}, {"uid": "github/christophuv/PeakBot_example", "html_url": "https://rseng.github.io/software/repository/github/christophuv/PeakBot_example", "api_url": "https://rseng.github.io/software/api/repos/github/christophuv/PeakBot_example"}, {"uid": "github/jmd-dk/concept", "html_url": "https://rseng.github.io/software/repository/github/jmd-dk/concept", "api_url": "https://rseng.github.io/software/api/repos/github/jmd-dk/concept"}, {"uid": "github/aasensio/molpop-cep", "html_url": "https://rseng.github.io/software/repository/github/aasensio/molpop-cep", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/molpop-cep"}, {"uid": "github/aasensio/sicon", "html_url": "https://rseng.github.io/software/repository/github/aasensio/sicon", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/sicon"}, {"uid": "github/aasensio/torchmfbd", "html_url": "https://rseng.github.io/software/repository/github/aasensio/torchmfbd", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/torchmfbd"}, {"uid": "github/aasensio/hazel", "html_url": "https://rseng.github.io/software/repository/github/aasensio/hazel", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/hazel"}, {"uid": "github/cosimoNigro/agnpy", "html_url": "https://rseng.github.io/software/repository/github/cosimoNigro/agnpy", "api_url": "https://rseng.github.io/software/api/repos/github/cosimoNigro/agnpy"}, {"uid": "github/natashabatalha/picaso", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/picaso", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/picaso"}, {"uid": "github/natashabatalha/PandExo", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/PandExo", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/PandExo"}, {"uid": "github/andresGranadosC/GalRotpy", "html_url": "https://rseng.github.io/software/repository/github/andresGranadosC/GalRotpy", "api_url": "https://rseng.github.io/software/api/repos/github/andresGranadosC/GalRotpy"}, {"uid": "github/samb8s/PsrPopPy", "html_url": "https://rseng.github.io/software/repository/github/samb8s/PsrPopPy", "api_url": "https://rseng.github.io/software/api/repos/github/samb8s/PsrPopPy"}, {"uid": "github/molscat/molscat", "html_url": "https://rseng.github.io/software/repository/github/molscat/molscat", "api_url": "https://rseng.github.io/software/api/repos/github/molscat/molscat"}, {"uid": "github/christophmschaefer/miluphcuda", "html_url": "https://rseng.github.io/software/repository/github/christophmschaefer/miluphcuda", "api_url": "https://rseng.github.io/software/api/repos/github/christophmschaefer/miluphcuda"}, {"uid": "github/debbiemarkslab/plmc", "html_url": "https://rseng.github.io/software/repository/github/debbiemarkslab/plmc", "api_url": "https://rseng.github.io/software/api/repos/github/debbiemarkslab/plmc"}, {"uid": "github/healpy/healpy", "html_url": "https://rseng.github.io/software/repository/github/healpy/healpy", "api_url": "https://rseng.github.io/software/api/repos/github/healpy/healpy"}, {"uid": "github/nilearn/nilearnhub.io", "html_url": "https://rseng.github.io/software/repository/github/nilearn/nilearnhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/nilearn/nilearnhub.io"}, {"uid": "github/EskelandLab/ShinyArchRUiO", "html_url": "https://rseng.github.io/software/repository/github/EskelandLab/ShinyArchRUiO", "api_url": "https://rseng.github.io/software/api/repos/github/EskelandLab/ShinyArchRUiO"}, {"uid": "github/OwenWard/ppdiag", "html_url": "https://rseng.github.io/software/repository/github/OwenWard/ppdiag", "api_url": "https://rseng.github.io/software/api/repos/github/OwenWard/ppdiag"}, {"uid": "github/dnonatar/Sequoia", "html_url": "https://rseng.github.io/software/repository/github/dnonatar/Sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/dnonatar/Sequoia"}, {"uid": "github/ablab/TandemTools", "html_url": "https://rseng.github.io/software/repository/github/ablab/TandemTools", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/TandemTools"}, {"uid": "github/ablab/nerpa", "html_url": "https://rseng.github.io/software/repository/github/ablab/nerpa", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/nerpa"}, {"uid": "github/ablab/spades", "html_url": "https://rseng.github.io/software/repository/github/ablab/spades", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/spades"}, {"uid": "github/ablab/quast", "html_url": "https://rseng.github.io/software/repository/github/ablab/quast", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/quast"}, {"uid": "github/SebOliver/PCA", "html_url": "https://rseng.github.io/software/repository/github/SebOliver/PCA", "api_url": "https://rseng.github.io/software/api/repos/github/SebOliver/PCA"}, {"uid": "github/cnes/EleFits", "html_url": "https://rseng.github.io/software/repository/github/cnes/EleFits", "api_url": "https://rseng.github.io/software/api/repos/github/cnes/EleFits"}, {"uid": "github/xragua/xraybinaryorbit", "html_url": "https://rseng.github.io/software/repository/github/xragua/xraybinaryorbit", "api_url": "https://rseng.github.io/software/api/repos/github/xragua/xraybinaryorbit"}, {"uid": "github/nand1155/CausNet", "html_url": "https://rseng.github.io/software/repository/github/nand1155/CausNet", "api_url": "https://rseng.github.io/software/api/repos/github/nand1155/CausNet"}, {"uid": "github/CDSP-SCPO/metadata-middleware", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/metadata-middleware", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/metadata-middleware"}, {"uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/WPSS-for-ESS-webpanel"}, {"uid": "github/CDSP-SCPO/dataverse-feed", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/dataverse-feed", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/dataverse-feed"}, {"uid": "github/KopalliV/Benchmarking_graph_pipelines", "html_url": "https://rseng.github.io/software/repository/github/KopalliV/Benchmarking_graph_pipelines", "api_url": "https://rseng.github.io/software/api/repos/github/KopalliV/Benchmarking_graph_pipelines"}, {"uid": "github/n8thangreen/BCEA", "html_url": "https://rseng.github.io/software/repository/github/n8thangreen/BCEA", "api_url": "https://rseng.github.io/software/api/repos/github/n8thangreen/BCEA"}, {"uid": "github/elliohow/fMRI_ROI_Analysis_Tool", "html_url": "https://rseng.github.io/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", "api_url": "https://rseng.github.io/software/api/repos/github/elliohow/fMRI_ROI_Analysis_Tool"}, {"uid": "github/big-data-lab-team/spot", "html_url": "https://rseng.github.io/software/repository/github/big-data-lab-team/spot", "api_url": "https://rseng.github.io/software/api/repos/github/big-data-lab-team/spot"}, {"uid": "github/hannorein/rebound", "html_url": "https://rseng.github.io/software/repository/github/hannorein/rebound", "api_url": "https://rseng.github.io/software/api/repos/github/hannorein/rebound"}, {"uid": "github/natir/vcf2parquet", "html_url": "https://rseng.github.io/software/repository/github/natir/vcf2parquet", "api_url": "https://rseng.github.io/software/api/repos/github/natir/vcf2parquet"}, {"uid": "github/natir/yacrd", "html_url": "https://rseng.github.io/software/repository/github/natir/yacrd", "api_url": "https://rseng.github.io/software/api/repos/github/natir/yacrd"}, {"uid": "github/natir/rustyread", "html_url": "https://rseng.github.io/software/repository/github/natir/rustyread", "api_url": "https://rseng.github.io/software/api/repos/github/natir/rustyread"}, {"uid": "github/ernewton/tellrv", "html_url": "https://rseng.github.io/software/repository/github/ernewton/tellrv", "api_url": "https://rseng.github.io/software/api/repos/github/ernewton/tellrv"}, {"uid": "github/mofanv/darknetz", "html_url": "https://rseng.github.io/software/repository/github/mofanv/darknetz", "api_url": "https://rseng.github.io/software/api/repos/github/mofanv/darknetz"}, {"uid": "github/Oftatkofta/cellocity", "html_url": "https://rseng.github.io/software/repository/github/Oftatkofta/cellocity", "api_url": "https://rseng.github.io/software/api/repos/github/Oftatkofta/cellocity"}, {"uid": "github/savage13/sacio", "html_url": "https://rseng.github.io/software/repository/github/savage13/sacio", "api_url": "https://rseng.github.io/software/api/repos/github/savage13/sacio"}, {"uid": "github/dcouvin/CRISPRCasFinder", "html_url": "https://rseng.github.io/software/repository/github/dcouvin/CRISPRCasFinder", "api_url": "https://rseng.github.io/software/api/repos/github/dcouvin/CRISPRCasFinder"}, {"uid": "github/simpeg/aurora", "html_url": "https://rseng.github.io/software/repository/github/simpeg/aurora", "api_url": "https://rseng.github.io/software/api/repos/github/simpeg/aurora"}, {"uid": "github/MiguelEA/nudec_BSM", "html_url": "https://rseng.github.io/software/repository/github/MiguelEA/nudec_BSM", "api_url": "https://rseng.github.io/software/api/repos/github/MiguelEA/nudec_BSM"}, {"uid": "github/clwainwright/CosmoTransitions", "html_url": "https://rseng.github.io/software/repository/github/clwainwright/CosmoTransitions", "api_url": "https://rseng.github.io/software/api/repos/github/clwainwright/CosmoTransitions"}, {"uid": "github/andymummeryastro/tidalspin", "html_url": "https://rseng.github.io/software/repository/github/andymummeryastro/tidalspin", "api_url": "https://rseng.github.io/software/api/repos/github/andymummeryastro/tidalspin"}, {"uid": "github/cgrudz/DataAssimilationBenchmarks.jl", "html_url": "https://rseng.github.io/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/cgrudz/DataAssimilationBenchmarks.jl"}, {"uid": "github/langfzac/Photodynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/langfzac/Photodynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/langfzac/Photodynamics.jl"}, {"uid": "github/maxpumperla/hyperas", "html_url": "https://rseng.github.io/software/repository/github/maxpumperla/hyperas", "api_url": "https://rseng.github.io/software/api/repos/github/maxpumperla/hyperas"}, {"uid": "github/astronomyk/SimCADO", "html_url": "https://rseng.github.io/software/repository/github/astronomyk/SimCADO", "api_url": "https://rseng.github.io/software/api/repos/github/astronomyk/SimCADO"}, {"uid": "github/IMS-MAXIMS/openMAXIMS", "html_url": "https://rseng.github.io/software/repository/github/IMS-MAXIMS/openMAXIMS", "api_url": "https://rseng.github.io/software/api/repos/github/IMS-MAXIMS/openMAXIMS"}, {"uid": "github/wjakethompson/measr", "html_url": "https://rseng.github.io/software/repository/github/wjakethompson/measr", "api_url": "https://rseng.github.io/software/api/repos/github/wjakethompson/measr"}, {"uid": "github/jeaadams/ExoPix", "html_url": "https://rseng.github.io/software/repository/github/jeaadams/ExoPix", "api_url": "https://rseng.github.io/software/api/repos/github/jeaadams/ExoPix"}, {"uid": "github/yuansliu/minirmd", "html_url": "https://rseng.github.io/software/repository/github/yuansliu/minirmd", "api_url": "https://rseng.github.io/software/api/repos/github/yuansliu/minirmd"}, {"uid": "github/dokkum/maskfill", "html_url": "https://rseng.github.io/software/repository/github/dokkum/maskfill", "api_url": "https://rseng.github.io/software/api/repos/github/dokkum/maskfill"}, {"uid": "github/pelahi/TreeFrog", "html_url": "https://rseng.github.io/software/repository/github/pelahi/TreeFrog", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/TreeFrog"}, {"uid": "github/pelahi/VELOCIraptor-STF", "html_url": "https://rseng.github.io/software/repository/github/pelahi/VELOCIraptor-STF", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/VELOCIraptor-STF"}, {"uid": "github/BioDepot/biodepot-launcher", "html_url": "https://rseng.github.io/software/repository/github/BioDepot/biodepot-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/BioDepot/biodepot-launcher"}, {"uid": "github/DrSoulain/PREVIS", "html_url": "https://rseng.github.io/software/repository/github/DrSoulain/PREVIS", "api_url": "https://rseng.github.io/software/api/repos/github/DrSoulain/PREVIS"}, {"uid": "github/y-256/libdivsufsort", "html_url": "https://rseng.github.io/software/repository/github/y-256/libdivsufsort", "api_url": "https://rseng.github.io/software/api/repos/github/y-256/libdivsufsort"}, {"uid": "github/eead-csic-compbio/get_homologues", "html_url": "https://rseng.github.io/software/repository/github/eead-csic-compbio/get_homologues", "api_url": "https://rseng.github.io/software/api/repos/github/eead-csic-compbio/get_homologues"}, {"uid": "github/WorkflowConversion/CTDConverter", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDConverter", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDConverter"}, {"uid": "github/WorkflowConversion/CTDopts", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDopts", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDopts"}, {"uid": "github/ocxtal/minialign", "html_url": "https://rseng.github.io/software/repository/github/ocxtal/minialign", "api_url": "https://rseng.github.io/software/api/repos/github/ocxtal/minialign"}, {"uid": "github/beckrob/Photo-z-SQL", "html_url": "https://rseng.github.io/software/repository/github/beckrob/Photo-z-SQL", "api_url": "https://rseng.github.io/software/api/repos/github/beckrob/Photo-z-SQL"}, {"uid": "github/FRBs/FRB", "html_url": "https://rseng.github.io/software/repository/github/FRBs/FRB", "api_url": "https://rseng.github.io/software/api/repos/github/FRBs/FRB"}, {"uid": "github/firedrakeproject/firedrake", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/firedrake", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/firedrake"}, {"uid": "github/firedrakeproject/checkpoint_schedules", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/checkpoint_schedules", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/checkpoint_schedules"}, {"uid": "github/firedrakeproject/gusto", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/gusto", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/gusto"}, {"uid": "github/tne-lab/py-behav-box-v2", "html_url": "https://rseng.github.io/software/repository/github/tne-lab/py-behav-box-v2", "api_url": "https://rseng.github.io/software/api/repos/github/tne-lab/py-behav-box-v2"}, {"uid": "github/galizia-lab/pyview", "html_url": "https://rseng.github.io/software/repository/github/galizia-lab/pyview", "api_url": "https://rseng.github.io/software/api/repos/github/galizia-lab/pyview"}, {"uid": "github/HoBeZwe/SphericalScattering.jl", "html_url": "https://rseng.github.io/software/repository/github/HoBeZwe/SphericalScattering.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HoBeZwe/SphericalScattering.jl"}, {"uid": "github/amkrajewski/nimCSO", "html_url": "https://rseng.github.io/software/repository/github/amkrajewski/nimCSO", "api_url": "https://rseng.github.io/software/api/repos/github/amkrajewski/nimCSO"}, {"uid": "github/bjmt/universalmotif", "html_url": "https://rseng.github.io/software/repository/github/bjmt/universalmotif", "api_url": "https://rseng.github.io/software/api/repos/github/bjmt/universalmotif"}, {"uid": "github/mcgalcode/pylattica", "html_url": "https://rseng.github.io/software/repository/github/mcgalcode/pylattica", "api_url": "https://rseng.github.io/software/api/repos/github/mcgalcode/pylattica"}, {"uid": "github/McMahonCosmologyGroup/holosim-ml", "html_url": "https://rseng.github.io/software/repository/github/McMahonCosmologyGroup/holosim-ml", "api_url": "https://rseng.github.io/software/api/repos/github/McMahonCosmologyGroup/holosim-ml"}, {"uid": "github/ucberkeleyseti/turbo_seti", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/turbo_seti", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/turbo_seti"}, {"uid": "github/ucberkeleyseti/blimpy", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/blimpy", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/blimpy"}, {"uid": "github/xychcz/S3Fit", "html_url": "https://rseng.github.io/software/repository/github/xychcz/S3Fit", "api_url": "https://rseng.github.io/software/api/repos/github/xychcz/S3Fit"}, {"uid": "github/coleygroup/pyscreener", "html_url": "https://rseng.github.io/software/repository/github/coleygroup/pyscreener", "api_url": "https://rseng.github.io/software/api/repos/github/coleygroup/pyscreener"}, {"uid": "github/yiling0210/APIR", "html_url": "https://rseng.github.io/software/repository/github/yiling0210/APIR", "api_url": "https://rseng.github.io/software/api/repos/github/yiling0210/APIR"}, {"uid": "github/sintefore/TimeStruct.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefore/TimeStruct.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefore/TimeStruct.jl"}, {"uid": "github/fulcrumgenomics/fgbio", "html_url": "https://rseng.github.io/software/repository/github/fulcrumgenomics/fgbio", "api_url": "https://rseng.github.io/software/api/repos/github/fulcrumgenomics/fgbio"}, {"uid": "github/mosdef-hub/mbuild", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/mbuild", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/mbuild"}, {"uid": "github/mosdef-hub/foyer", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/foyer", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/foyer"}, {"uid": "github/pmelchior/des-exp-checker", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/des-exp-checker", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/des-exp-checker"}, {"uid": "github/pmelchior/shapelens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shapelens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shapelens"}, {"uid": "github/pmelchior/scarlet", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/scarlet", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/scarlet"}, {"uid": "github/pmelchior/skymapper", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skymapper", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skymapper"}, {"uid": "github/pmelchior/shear-stacking", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shear-stacking", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shear-stacking"}, {"uid": "github/pmelchior/skylens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skylens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skylens"}, {"uid": "github/pmelchior/epsnoise", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/epsnoise", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/epsnoise"}, {"uid": "github/pmelchior/pyGMMis", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/pyGMMis", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/pyGMMis"}, {"uid": "github/pmelchior/spender", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/spender", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/spender"}, {"uid": "github/EACcodes/TigerCI", "html_url": "https://rseng.github.io/software/repository/github/EACcodes/TigerCI", "api_url": "https://rseng.github.io/software/api/repos/github/EACcodes/TigerCI"}, {"uid": "github/APGG-Lab/APGG", "html_url": "https://rseng.github.io/software/repository/github/APGG-Lab/APGG", "api_url": "https://rseng.github.io/software/api/repos/github/APGG-Lab/APGG"}, {"uid": "github/jacksund/simmate", "html_url": "https://rseng.github.io/software/repository/github/jacksund/simmate", "api_url": "https://rseng.github.io/software/api/repos/github/jacksund/simmate"}, {"uid": "github/CalumHawcroft/Starburst", "html_url": "https://rseng.github.io/software/repository/github/CalumHawcroft/Starburst", "api_url": "https://rseng.github.io/software/api/repos/github/CalumHawcroft/Starburst"}, {"uid": "github/SunilAnandatheertha/PXO", "html_url": "https://rseng.github.io/software/repository/github/SunilAnandatheertha/PXO", "api_url": "https://rseng.github.io/software/api/repos/github/SunilAnandatheertha/PXO"}, {"uid": "github/zenitani/OpenMHD", "html_url": "https://rseng.github.io/software/repository/github/zenitani/OpenMHD", "api_url": "https://rseng.github.io/software/api/repos/github/zenitani/OpenMHD"}, {"uid": "github/Rnazx/Scaling-Relations", "html_url": "https://rseng.github.io/software/repository/github/Rnazx/Scaling-Relations", "api_url": "https://rseng.github.io/software/api/repos/github/Rnazx/Scaling-Relations"}, {"uid": "github/WaterFutures/EPyT-Flow", "html_url": "https://rseng.github.io/software/repository/github/WaterFutures/EPyT-Flow", "api_url": "https://rseng.github.io/software/api/repos/github/WaterFutures/EPyT-Flow"}, {"uid": "github/flexible-atomic-code/fac", "html_url": "https://rseng.github.io/software/repository/github/flexible-atomic-code/fac", "api_url": "https://rseng.github.io/software/api/repos/github/flexible-atomic-code/fac"}, {"uid": "github/GenomicParisCentre/toulligQC", "html_url": "https://rseng.github.io/software/repository/github/GenomicParisCentre/toulligQC", "api_url": "https://rseng.github.io/software/api/repos/github/GenomicParisCentre/toulligQC"}, {"uid": "github/NickMilsonPhysics/BinaryStarSolver", "html_url": "https://rseng.github.io/software/repository/github/NickMilsonPhysics/BinaryStarSolver", "api_url": "https://rseng.github.io/software/api/repos/github/NickMilsonPhysics/BinaryStarSolver"}, {"uid": "github/soylentdeen/MoogStokes", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/MoogStokes", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/MoogStokes"}, {"uid": "github/soylentdeen/CounterPoint", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/CounterPoint", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/CounterPoint"}, {"uid": "github/snowformatics/macrobot", "html_url": "https://rseng.github.io/software/repository/github/snowformatics/macrobot", "api_url": "https://rseng.github.io/software/api/repos/github/snowformatics/macrobot"}, {"uid": "github/cnsetzer/kilopop", "html_url": "https://rseng.github.io/software/repository/github/cnsetzer/kilopop", "api_url": "https://rseng.github.io/software/api/repos/github/cnsetzer/kilopop"}, {"uid": "github/coder/code-server", "html_url": "https://rseng.github.io/software/repository/github/coder/code-server", "api_url": "https://rseng.github.io/software/api/repos/github/coder/code-server"}, {"uid": "github/youngjookim/sdr", "html_url": "https://rseng.github.io/software/repository/github/youngjookim/sdr", "api_url": "https://rseng.github.io/software/api/repos/github/youngjookim/sdr"}, {"uid": "github/DICP1810/ComMap", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/ComMap", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/ComMap"}, {"uid": "github/DICP1810/SpotLink", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/SpotLink", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/SpotLink"}, {"uid": "github/sebhoof/SolarAxionFlux", "html_url": "https://rseng.github.io/software/repository/github/sebhoof/SolarAxionFlux", "api_url": "https://rseng.github.io/software/api/repos/github/sebhoof/SolarAxionFlux"}, {"uid": "github/NorwegianVeterinaryInstitute/ALPPACA", "html_url": "https://rseng.github.io/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", "api_url": "https://rseng.github.io/software/api/repos/github/NorwegianVeterinaryInstitute/ALPPACA"}, {"uid": "github/jimmink/argslab", "html_url": "https://rseng.github.io/software/repository/github/jimmink/argslab", "api_url": "https://rseng.github.io/software/api/repos/github/jimmink/argslab"}, {"uid": "github/nhurleywalker/fits_warp", "html_url": "https://rseng.github.io/software/repository/github/nhurleywalker/fits_warp", "api_url": "https://rseng.github.io/software/api/repos/github/nhurleywalker/fits_warp"}, {"uid": "github/bwvdnbro/CMacIonize", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/CMacIonize", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/CMacIonize"}, {"uid": "github/bwvdnbro/HydroCode1D", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/HydroCode1D", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/HydroCode1D"}, {"uid": "github/alexander-shen/rtest", "html_url": "https://rseng.github.io/software/repository/github/alexander-shen/rtest", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-shen/rtest"}, {"uid": "github/asancpt/caffsim", "html_url": "https://rseng.github.io/software/repository/github/asancpt/caffsim", "api_url": "https://rseng.github.io/software/api/repos/github/asancpt/caffsim"}, {"uid": "github/wen-jams/bsavi", "html_url": "https://rseng.github.io/software/repository/github/wen-jams/bsavi", "api_url": "https://rseng.github.io/software/api/repos/github/wen-jams/bsavi"}, {"uid": "github/LukeDuttweiler/skipTrack", "html_url": "https://rseng.github.io/software/repository/github/LukeDuttweiler/skipTrack", "api_url": "https://rseng.github.io/software/api/repos/github/LukeDuttweiler/skipTrack"}, {"uid": "github/multiscale/muscle3", "html_url": "https://rseng.github.io/software/repository/github/multiscale/muscle3", "api_url": "https://rseng.github.io/software/api/repos/github/multiscale/muscle3"}, {"uid": "github/AstroUGent/shadowfax", "html_url": "https://rseng.github.io/software/repository/github/AstroUGent/shadowfax", "api_url": "https://rseng.github.io/software/api/repos/github/AstroUGent/shadowfax"}, {"uid": "github/Yunzheng168/PANCAKE", "html_url": "https://rseng.github.io/software/repository/github/Yunzheng168/PANCAKE", "api_url": "https://rseng.github.io/software/api/repos/github/Yunzheng168/PANCAKE"}, {"uid": "github/lemene/PECAT", "html_url": "https://rseng.github.io/software/repository/github/lemene/PECAT", "api_url": "https://rseng.github.io/software/api/repos/github/lemene/PECAT"}, {"uid": "github/Martindelosrios/cosmic-kite", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/cosmic-kite", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/cosmic-kite"}, {"uid": "github/Martindelosrios/ROGER", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/ROGER", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/ROGER"}, {"uid": "github/Martindelosrios/MeSsI", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/MeSsI", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/MeSsI"}, {"uid": "github/fatmasevinck/enetLTS", "html_url": "https://rseng.github.io/software/repository/github/fatmasevinck/enetLTS", "api_url": "https://rseng.github.io/software/api/repos/github/fatmasevinck/enetLTS"}, {"uid": "github/esplint/IRACpm", "html_url": "https://rseng.github.io/software/repository/github/esplint/IRACpm", "api_url": "https://rseng.github.io/software/api/repos/github/esplint/IRACpm"}, {"uid": "github/cosmodesi/pycorr", "html_url": "https://rseng.github.io/software/repository/github/cosmodesi/pycorr", "api_url": "https://rseng.github.io/software/api/repos/github/cosmodesi/pycorr"}, {"uid": "github/mlysy/LocalCop", "html_url": "https://rseng.github.io/software/repository/github/mlysy/LocalCop", "api_url": "https://rseng.github.io/software/api/repos/github/mlysy/LocalCop"}, {"uid": "github/Materials-Consortia/OPTIMADE-Filter", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/OPTIMADE-Filter", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/OPTIMADE-Filter"}, {"uid": "github/Materials-Consortia/optimade-python-tools", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/optimade-python-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/optimade-python-tools"}, {"uid": "github/cersonsky-lab/AniSOAP", "html_url": "https://rseng.github.io/software/repository/github/cersonsky-lab/AniSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/cersonsky-lab/AniSOAP"}, {"uid": "github/mtceballos/SIRENAdoc", "html_url": "https://rseng.github.io/software/repository/github/mtceballos/SIRENAdoc", "api_url": "https://rseng.github.io/software/api/repos/github/mtceballos/SIRENAdoc"}, {"uid": "github/astrobrent/mappings", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/mappings", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/mappings"}, {"uid": "github/astrobrent/itera", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/itera", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/itera"}, {"uid": "github/galaxy001/pirs", "html_url": "https://rseng.github.io/software/repository/github/galaxy001/pirs", "api_url": "https://rseng.github.io/software/api/repos/github/galaxy001/pirs"}, {"uid": "github/Kushaalkumar-pothula/FLARE", "html_url": "https://rseng.github.io/software/repository/github/Kushaalkumar-pothula/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/Kushaalkumar-pothula/FLARE"}, {"uid": "github/pylops/pyproximal", "html_url": "https://rseng.github.io/software/repository/github/pylops/pyproximal", "api_url": "https://rseng.github.io/software/api/repos/github/pylops/pyproximal"}, {"uid": "github/openscm/openscm-twolayermodel", "html_url": "https://rseng.github.io/software/repository/github/openscm/openscm-twolayermodel", "api_url": "https://rseng.github.io/software/api/repos/github/openscm/openscm-twolayermodel"}, {"uid": "github/dirmeier/surjectors", "html_url": "https://rseng.github.io/software/repository/github/dirmeier/surjectors", "api_url": "https://rseng.github.io/software/api/repos/github/dirmeier/surjectors"}, {"uid": "github/lnasellentin/DALI", "html_url": "https://rseng.github.io/software/repository/github/lnasellentin/DALI", "api_url": "https://rseng.github.io/software/api/repos/github/lnasellentin/DALI"}, {"uid": "github/scipy/scipy", "html_url": "https://rseng.github.io/software/repository/github/scipy/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/scipy/scipy"}, {"uid": "github/spacepy/spacepy", "html_url": "https://rseng.github.io/software/repository/github/spacepy/spacepy", "api_url": "https://rseng.github.io/software/api/repos/github/spacepy/spacepy"}, {"uid": "github/alexlewin24/BLSEM", "html_url": "https://rseng.github.io/software/repository/github/alexlewin24/BLSEM", "api_url": "https://rseng.github.io/software/api/repos/github/alexlewin24/BLSEM"}, {"uid": "github/huanghua1994/HiGP", "html_url": "https://rseng.github.io/software/repository/github/huanghua1994/HiGP", "api_url": "https://rseng.github.io/software/api/repos/github/huanghua1994/HiGP"}, {"uid": "github/sylabs/singularity", "html_url": "https://rseng.github.io/software/repository/github/sylabs/singularity", "api_url": "https://rseng.github.io/software/api/repos/github/sylabs/singularity"}, {"uid": "github/PDBeurope/pdb-images", "html_url": "https://rseng.github.io/software/repository/github/PDBeurope/pdb-images", "api_url": "https://rseng.github.io/software/api/repos/github/PDBeurope/pdb-images"}, {"uid": "github/OpenHPS/openhps-core", "html_url": "https://rseng.github.io/software/repository/github/OpenHPS/openhps-core", "api_url": "https://rseng.github.io/software/api/repos/github/OpenHPS/openhps-core"}, {"uid": "github/CITCOM-project/CausalTestingFramework", "html_url": "https://rseng.github.io/software/repository/github/CITCOM-project/CausalTestingFramework", "api_url": "https://rseng.github.io/software/api/repos/github/CITCOM-project/CausalTestingFramework"}, {"uid": "github/FabioRigamonti/pyADfit", "html_url": "https://rseng.github.io/software/repository/github/FabioRigamonti/pyADfit", "api_url": "https://rseng.github.io/software/api/repos/github/FabioRigamonti/pyADfit"}, {"uid": "github/GENtle-persons/gentle-m", "html_url": "https://rseng.github.io/software/repository/github/GENtle-persons/gentle-m", "api_url": "https://rseng.github.io/software/api/repos/github/GENtle-persons/gentle-m"}, {"uid": "github/s2mLab/pyScienceMode", "html_url": "https://rseng.github.io/software/repository/github/s2mLab/pyScienceMode", "api_url": "https://rseng.github.io/software/api/repos/github/s2mLab/pyScienceMode"}, {"uid": "github/sarrvesh/cuFFS", "html_url": "https://rseng.github.io/software/repository/github/sarrvesh/cuFFS", "api_url": "https://rseng.github.io/software/api/repos/github/sarrvesh/cuFFS"}, {"uid": "github/vojtech-sidorin/quickclump", "html_url": "https://rseng.github.io/software/repository/github/vojtech-sidorin/quickclump", "api_url": "https://rseng.github.io/software/api/repos/github/vojtech-sidorin/quickclump"}, {"uid": "github/changhoonhahn/pySpectrum", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/pySpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/pySpectrum"}, {"uid": "github/changhoonhahn/haloflow", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/haloflow"}, {"uid": "github/changhoonhahn/provabgs", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/provabgs", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/provabgs"}, {"uid": "github/lxvm/AutoBZ.jl", "html_url": "https://rseng.github.io/software/repository/github/lxvm/AutoBZ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lxvm/AutoBZ.jl"}, {"uid": "github/hjens/lasso_spectra", "html_url": "https://rseng.github.io/software/repository/github/hjens/lasso_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/hjens/lasso_spectra"}, {"uid": "github/tud-hri/travia", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/travia", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/travia"}, {"uid": "github/tud-hri/joan", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/joan", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/joan"}, {"uid": "github/sterinaldi/FIGARO", "html_url": "https://rseng.github.io/software/repository/github/sterinaldi/FIGARO", "api_url": "https://rseng.github.io/software/api/repos/github/sterinaldi/FIGARO"}, {"uid": "github/micbia/SubgridClumping", "html_url": "https://rseng.github.io/software/repository/github/micbia/SubgridClumping", "api_url": "https://rseng.github.io/software/api/repos/github/micbia/SubgridClumping"}, {"uid": "github/jveitchmichaelis/pygadgetreader", "html_url": "https://rseng.github.io/software/repository/github/jveitchmichaelis/pygadgetreader", "api_url": "https://rseng.github.io/software/api/repos/github/jveitchmichaelis/pygadgetreader"}, {"uid": "github/QuackenbushLab/NetworkDataCompanion", "html_url": "https://rseng.github.io/software/repository/github/QuackenbushLab/NetworkDataCompanion", "api_url": "https://rseng.github.io/software/api/repos/github/QuackenbushLab/NetworkDataCompanion"}, {"uid": "github/pnnl/interflow", "html_url": "https://rseng.github.io/software/repository/github/pnnl/interflow", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/interflow"}, {"uid": "github/pnnl/HyperNetX", "html_url": "https://rseng.github.io/software/repository/github/pnnl/HyperNetX", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/HyperNetX"}, {"uid": "github/robashaw/libecpint", "html_url": "https://rseng.github.io/software/repository/github/robashaw/libecpint", "api_url": "https://rseng.github.io/software/api/repos/github/robashaw/libecpint"}, {"uid": "github/prashjet/popkinmocks", "html_url": "https://rseng.github.io/software/repository/github/prashjet/popkinmocks", "api_url": "https://rseng.github.io/software/api/repos/github/prashjet/popkinmocks"}, {"uid": "github/Narayana-Rao/SAR-tools", "html_url": "https://rseng.github.io/software/repository/github/Narayana-Rao/SAR-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Narayana-Rao/SAR-tools"}, {"uid": "github/PimenoffV/biotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/biotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/biotic"}, {"uid": "github/PimenoffV/VIBE", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/VIBE", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/VIBE"}, {"uid": "github/PimenoffV/Abiotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/Abiotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/Abiotic"}, {"uid": "github/U-Alberta/ADaPT-ML", "html_url": "https://rseng.github.io/software/repository/github/U-Alberta/ADaPT-ML", "api_url": "https://rseng.github.io/software/api/repos/github/U-Alberta/ADaPT-ML"}, {"uid": "github/casacore/casacore", "html_url": "https://rseng.github.io/software/repository/github/casacore/casacore", "api_url": "https://rseng.github.io/software/api/repos/github/casacore/casacore"}, {"uid": "github/EESI/Complet-Plus", "html_url": "https://rseng.github.io/software/repository/github/EESI/Complet-Plus", "api_url": "https://rseng.github.io/software/api/repos/github/EESI/Complet-Plus"}, {"uid": "github/navasmontilla/CAELUM", "html_url": "https://rseng.github.io/software/repository/github/navasmontilla/CAELUM", "api_url": "https://rseng.github.io/software/api/repos/github/navasmontilla/CAELUM"}, {"uid": "github/rsnemmen/BCES", "html_url": "https://rseng.github.io/software/repository/github/rsnemmen/BCES", "api_url": "https://rseng.github.io/software/api/repos/github/rsnemmen/BCES"}, {"uid": "github/Parsl/parsl", "html_url": "https://rseng.github.io/software/repository/github/Parsl/parsl", "api_url": "https://rseng.github.io/software/api/repos/github/Parsl/parsl"}, {"uid": "github/iontorrent/TS", "html_url": "https://rseng.github.io/software/repository/github/iontorrent/TS", "api_url": "https://rseng.github.io/software/api/repos/github/iontorrent/TS"}, {"uid": "github/cc646201081/CircSI-SSL", "html_url": "https://rseng.github.io/software/repository/github/cc646201081/CircSI-SSL", "api_url": "https://rseng.github.io/software/api/repos/github/cc646201081/CircSI-SSL"}, {"uid": "github/grazianoucci/game", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/game", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/game"}, {"uid": "github/grazianoucci/cosmic_variance", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/cosmic_variance", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/cosmic_variance"}, {"uid": "github/aritrachakrabarty/GPS", "html_url": "https://rseng.github.io/software/repository/github/aritrachakrabarty/GPS", "api_url": "https://rseng.github.io/software/api/repos/github/aritrachakrabarty/GPS"}, {"uid": "github/Climdyn/qgs", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/qgs", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/qgs"}, {"uid": "github/Climdyn/auto-AUTO", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/auto-AUTO", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/auto-AUTO"}, {"uid": "github/tfwillems/HipSTR", "html_url": "https://rseng.github.io/software/repository/github/tfwillems/HipSTR", "api_url": "https://rseng.github.io/software/api/repos/github/tfwillems/HipSTR"}, {"uid": "github/USNavalResearchLaboratory/eispac", "html_url": "https://rseng.github.io/software/repository/github/USNavalResearchLaboratory/eispac", "api_url": "https://rseng.github.io/software/api/repos/github/USNavalResearchLaboratory/eispac"}, {"uid": "github/YeoLab/FLARE", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/FLARE"}, {"uid": "github/YeoLab/clipper", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/clipper", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/clipper"}, {"uid": "github/RemieJanssen/phylox", "html_url": "https://rseng.github.io/software/repository/github/RemieJanssen/phylox", "api_url": "https://rseng.github.io/software/api/repos/github/RemieJanssen/phylox"}, {"uid": "github/dewberryjanosz/polyrot", "html_url": "https://rseng.github.io/software/repository/github/dewberryjanosz/polyrot", "api_url": "https://rseng.github.io/software/api/repos/github/dewberryjanosz/polyrot"}, {"uid": "github/aviadpi/SparseBLS", "html_url": "https://rseng.github.io/software/repository/github/aviadpi/SparseBLS", "api_url": "https://rseng.github.io/software/api/repos/github/aviadpi/SparseBLS"}, {"uid": "github/mirnylab/cooler", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/cooler", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/cooler"}, {"uid": "github/mirnylab/pairtools", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/pairtools"}, {"uid": "github/discsim/frank", "html_url": "https://rseng.github.io/software/repository/github/discsim/frank", "api_url": "https://rseng.github.io/software/api/repos/github/discsim/frank"}, {"uid": "github/sdrastro/NWelch", "html_url": "https://rseng.github.io/software/repository/github/sdrastro/NWelch", "api_url": "https://rseng.github.io/software/api/repos/github/sdrastro/NWelch"}, {"uid": "github/DrDaveShaw/INCHEM-Py", "html_url": "https://rseng.github.io/software/repository/github/DrDaveShaw/INCHEM-Py", "api_url": "https://rseng.github.io/software/api/repos/github/DrDaveShaw/INCHEM-Py"}, {"uid": "github/abschneider/StrainHub", "html_url": "https://rseng.github.io/software/repository/github/abschneider/StrainHub", "api_url": "https://rseng.github.io/software/api/repos/github/abschneider/StrainHub"}, {"uid": "github/MESAHub/mesa", "html_url": "https://rseng.github.io/software/repository/github/MESAHub/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/MESAHub/mesa"}, {"uid": "github/mne-tools/mne-python", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-python", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-python"}, {"uid": "github/mne-tools/mne-icalabel", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-icalabel", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-icalabel"}, {"uid": "github/mne-tools/mne-lsl", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-lsl", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-lsl"}, {"uid": "github/ZjuLiangsl/mmkp", "html_url": "https://rseng.github.io/software/repository/github/ZjuLiangsl/mmkp", "api_url": "https://rseng.github.io/software/api/repos/github/ZjuLiangsl/mmkp"}, {"uid": "github/tornede/py_experimenter", "html_url": "https://rseng.github.io/software/repository/github/tornede/py_experimenter", "api_url": "https://rseng.github.io/software/api/repos/github/tornede/py_experimenter"}, {"uid": "github/mfem/mfem", "html_url": "https://rseng.github.io/software/repository/github/mfem/mfem", "api_url": "https://rseng.github.io/software/api/repos/github/mfem/mfem"}, {"uid": "github/berenslab/MorphoPy", "html_url": "https://rseng.github.io/software/repository/github/berenslab/MorphoPy", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/MorphoPy"}, {"uid": "github/berenslab/fundus_image_toolbox", "html_url": "https://rseng.github.io/software/repository/github/berenslab/fundus_image_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/fundus_image_toolbox"}, {"uid": "github/theGreatHerrLebert/rustims", "html_url": "https://rseng.github.io/software/repository/github/theGreatHerrLebert/rustims", "api_url": "https://rseng.github.io/software/api/repos/github/theGreatHerrLebert/rustims"}, {"uid": "github/danielkoll/tidally-locked-coordinates", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/tidally-locked-coordinates", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/tidally-locked-coordinates"}, {"uid": "github/danielkoll/PyRADS", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/PyRADS", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/PyRADS"}, {"uid": "github/freesurfer/freesurfer", "html_url": "https://rseng.github.io/software/repository/github/freesurfer/freesurfer", "api_url": "https://rseng.github.io/software/api/repos/github/freesurfer/freesurfer"}, {"uid": "github/ImperialCollegeLondon/pytest_template_application", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/pytest_template_application", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/pytest_template_application"}, {"uid": "github/ImperialCollegeLondon/champ", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/champ", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/champ"}, {"uid": "github/ImperialCollegeLondon/sap-voicebox", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sap-voicebox", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sap-voicebox"}, {"uid": "github/ImperialCollegeLondon/hcga", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/hcga", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/hcga"}, {"uid": "github/ImperialCollegeLondon/SWMManywhere", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/SWMManywhere", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/SWMManywhere"}, {"uid": "github/ImperialCollegeLondon/ICLOCS", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/ICLOCS", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/ICLOCS"}, {"uid": "github/ImperialCollegeLondon/UVLM", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/UVLM", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/UVLM"}, {"uid": "github/ImperialCollegeLondon/safedata", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/safedata", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/safedata"}, {"uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs_cluster_scripts"}, {"uid": "github/ImperialCollegeLondon/fractalgenetics", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/fractalgenetics", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/fractalgenetics"}, {"uid": "github/ImperialCollegeLondon/research-software-directory-data", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/research-software-directory-data", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/research-software-directory-data"}, {"uid": "github/ImperialCollegeLondon/R2T2", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/R2T2", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/R2T2"}, {"uid": "github/ImperialCollegeLondon/covid19model", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/covid19model", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/covid19model"}, {"uid": "github/ImperialCollegeLondon/sharpy", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sharpy", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sharpy"}, {"uid": "github/ImperialCollegeLondon/magda_tools", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/magda_tools", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/magda_tools"}, {"uid": "github/ImperialCollegeLondon/epidemia", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/epidemia", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/epidemia"}, {"uid": "github/ImperialCollegeLondon/rcs-pacemakers", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs-pacemakers"}, {"uid": "github/ImperialCollegeLondon/django-drf-filepond", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/django-drf-filepond", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/django-drf-filepond"}, {"uid": "github/ImperialCollegeLondon/WInc3D", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/WInc3D", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/WInc3D"}, {"uid": "github/ImperialCollegeLondon/adam", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/adam", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/adam"}, {"uid": "github/ImperialCollegeLondon/EpiCollectplus", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/EpiCollectplus", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/EpiCollectplus"}, {"uid": "github/ImperialCollegeLondon/PyProBE", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/PyProBE", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/PyProBE"}, {"uid": "github/agnetelundgaard/BALDR", "html_url": "https://rseng.github.io/software/repository/github/agnetelundgaard/BALDR", "api_url": "https://rseng.github.io/software/api/repos/github/agnetelundgaard/BALDR"}, {"uid": "github/barbagroup/geoclaw-landspill", "html_url": "https://rseng.github.io/software/repository/github/barbagroup/geoclaw-landspill", "api_url": "https://rseng.github.io/software/api/repos/github/barbagroup/geoclaw-landspill"}, {"uid": "github/parallelwindfarms/byteparsing", "html_url": "https://rseng.github.io/software/repository/github/parallelwindfarms/byteparsing", "api_url": "https://rseng.github.io/software/api/repos/github/parallelwindfarms/byteparsing"}, {"uid": "github/dvallesp/vortex-p", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex-p", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex-p"}, {"uid": "github/dvallesp/asohf", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/asohf", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/asohf"}, {"uid": "github/dvallesp/vortex", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex"}, {"uid": "github/mourisl/Lighter", "html_url": "https://rseng.github.io/software/repository/github/mourisl/Lighter", "api_url": "https://rseng.github.io/software/api/repos/github/mourisl/Lighter"}, {"uid": "github/pmlmodelling/nctoolkit", "html_url": "https://rseng.github.io/software/repository/github/pmlmodelling/nctoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/pmlmodelling/nctoolkit"}, {"uid": "github/aprsa/dips", "html_url": "https://rseng.github.io/software/repository/github/aprsa/dips", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/dips"}, {"uid": "github/aprsa/ebai", "html_url": "https://rseng.github.io/software/repository/github/aprsa/ebai", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/ebai"}, {"uid": "github/archaeo-pteryx/PowerSpecCovFFT", "html_url": "https://rseng.github.io/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", "api_url": "https://rseng.github.io/software/api/repos/github/archaeo-pteryx/PowerSpecCovFFT"}, {"uid": "github/vcflib/bio-vcf", "html_url": "https://rseng.github.io/software/repository/github/vcflib/bio-vcf", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/bio-vcf"}, {"uid": "github/vcflib/vcflib", "html_url": "https://rseng.github.io/software/repository/github/vcflib/vcflib", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/vcflib"}, {"uid": "github/domeckert/pyproffit", "html_url": "https://rseng.github.io/software/repository/github/domeckert/pyproffit", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/pyproffit"}, {"uid": "github/domeckert/hydromass", "html_url": "https://rseng.github.io/software/repository/github/domeckert/hydromass", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/hydromass"}, {"uid": "github/domeckert/xmm_simulator", "html_url": "https://rseng.github.io/software/repository/github/domeckert/xmm_simulator", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/xmm_simulator"}, {"uid": "github/nvalimak/fsm-lite", "html_url": "https://rseng.github.io/software/repository/github/nvalimak/fsm-lite", "api_url": "https://rseng.github.io/software/api/repos/github/nvalimak/fsm-lite"}, {"uid": "github/connectomicslab/connectomemapper3", "html_url": "https://rseng.github.io/software/repository/github/connectomicslab/connectomemapper3", "api_url": "https://rseng.github.io/software/api/repos/github/connectomicslab/connectomemapper3"}, {"uid": "github/radicamc/exoTEDRF", "html_url": "https://rseng.github.io/software/repository/github/radicamc/exoTEDRF", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/exoTEDRF"}, {"uid": "github/radicamc/applesoss", "html_url": "https://rseng.github.io/software/repository/github/radicamc/applesoss", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/applesoss"}, {"uid": "github/FabrizioMusacchio/MotilA", "html_url": "https://rseng.github.io/software/repository/github/FabrizioMusacchio/MotilA", "api_url": "https://rseng.github.io/software/api/repos/github/FabrizioMusacchio/MotilA"}, {"uid": "github/BogdanCiambur/PROFILER", "html_url": "https://rseng.github.io/software/repository/github/BogdanCiambur/PROFILER", "api_url": "https://rseng.github.io/software/api/repos/github/BogdanCiambur/PROFILER"}, {"uid": "github/pengweixing/FACT", "html_url": "https://rseng.github.io/software/repository/github/pengweixing/FACT", "api_url": "https://rseng.github.io/software/api/repos/github/pengweixing/FACT"}, {"uid": "github/MSABuschmann/sledgehamr", "html_url": "https://rseng.github.io/software/repository/github/MSABuschmann/sledgehamr", "api_url": "https://rseng.github.io/software/api/repos/github/MSABuschmann/sledgehamr"}, {"uid": "github/BioMeCIS-Lab/OpenOmics", "html_url": "https://rseng.github.io/software/repository/github/BioMeCIS-Lab/OpenOmics", "api_url": "https://rseng.github.io/software/api/repos/github/BioMeCIS-Lab/OpenOmics"}, {"uid": "github/free1234hm/CLAM", "html_url": "https://rseng.github.io/software/repository/github/free1234hm/CLAM", "api_url": "https://rseng.github.io/software/api/repos/github/free1234hm/CLAM"}, {"uid": "github/elixir-europe/rdmkit", "html_url": "https://rseng.github.io/software/repository/github/elixir-europe/rdmkit", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-europe/rdmkit"}, {"uid": "github/dingyaozhang/Evitar", "html_url": "https://rseng.github.io/software/repository/github/dingyaozhang/Evitar", "api_url": "https://rseng.github.io/software/api/repos/github/dingyaozhang/Evitar"}, {"uid": "github/kidusasfaw/spatPomp", "html_url": "https://rseng.github.io/software/repository/github/kidusasfaw/spatPomp", "api_url": "https://rseng.github.io/software/api/repos/github/kidusasfaw/spatPomp"}, {"uid": "github/cbrueffer/tophat-recondition", "html_url": "https://rseng.github.io/software/repository/github/cbrueffer/tophat-recondition", "api_url": "https://rseng.github.io/software/api/repos/github/cbrueffer/tophat-recondition"}, {"uid": "github/pezmaster31/bamtools", "html_url": "https://rseng.github.io/software/repository/github/pezmaster31/bamtools", "api_url": "https://rseng.github.io/software/api/repos/github/pezmaster31/bamtools"}, {"uid": "github/eEcoLiDAR/Laserfarm", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/Laserfarm", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/Laserfarm"}, {"uid": "github/eEcoLiDAR/laserchicken", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/laserchicken", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/laserchicken"}, {"uid": "github/Azeret/galIMF", "html_url": "https://rseng.github.io/software/repository/github/Azeret/galIMF", "api_url": "https://rseng.github.io/software/api/repos/github/Azeret/galIMF"}, {"uid": "github/ICAMS/strucscan", "html_url": "https://rseng.github.io/software/repository/github/ICAMS/strucscan", "api_url": "https://rseng.github.io/software/api/repos/github/ICAMS/strucscan"}, {"uid": "github/heracles-ec/heracles", "html_url": "https://rseng.github.io/software/repository/github/heracles-ec/heracles", "api_url": "https://rseng.github.io/software/api/repos/github/heracles-ec/heracles"}, {"uid": "github/ianvcaldas/smalldisco", "html_url": "https://rseng.github.io/software/repository/github/ianvcaldas/smalldisco", "api_url": "https://rseng.github.io/software/api/repos/github/ianvcaldas/smalldisco"}, {"uid": "github/matteobachetti/TOAextractor", "html_url": "https://rseng.github.io/software/repository/github/matteobachetti/TOAextractor", "api_url": "https://rseng.github.io/software/api/repos/github/matteobachetti/TOAextractor"}, {"uid": "github/mbaes/SpheCow", "html_url": "https://rseng.github.io/software/repository/github/mbaes/SpheCow", "api_url": "https://rseng.github.io/software/api/repos/github/mbaes/SpheCow"}, {"uid": "github/ParkvilleData/MetaGenePipe", "html_url": "https://rseng.github.io/software/repository/github/ParkvilleData/MetaGenePipe", "api_url": "https://rseng.github.io/software/api/repos/github/ParkvilleData/MetaGenePipe"}, {"uid": "github/rvalieris/parallel-fastq-dump", "html_url": "https://rseng.github.io/software/repository/github/rvalieris/parallel-fastq-dump", "api_url": "https://rseng.github.io/software/api/repos/github/rvalieris/parallel-fastq-dump"}, {"uid": "github/MMV-Lab/mmv_im2im", "html_url": "https://rseng.github.io/software/repository/github/MMV-Lab/mmv_im2im", "api_url": "https://rseng.github.io/software/api/repos/github/MMV-Lab/mmv_im2im"}, {"uid": "github/thomaswilliamsastro/mcfine", "html_url": "https://rseng.github.io/software/repository/github/thomaswilliamsastro/mcfine", "api_url": "https://rseng.github.io/software/api/repos/github/thomaswilliamsastro/mcfine"}, {"uid": "github/lkreidberg/batman", "html_url": "https://rseng.github.io/software/repository/github/lkreidberg/batman", "api_url": "https://rseng.github.io/software/api/repos/github/lkreidberg/batman"}, {"uid": "github/AnkitBarik/planetMagFields", "html_url": "https://rseng.github.io/software/repository/github/AnkitBarik/planetMagFields", "api_url": "https://rseng.github.io/software/api/repos/github/AnkitBarik/planetMagFields"}, {"uid": "github/david-deboer/radiobear", "html_url": "https://rseng.github.io/software/repository/github/david-deboer/radiobear", "api_url": "https://rseng.github.io/software/api/repos/github/david-deboer/radiobear"}, {"uid": "github/nespinoza/mc-spam", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/mc-spam", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/mc-spam"}, {"uid": "github/nespinoza/limb-darkening", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/limb-darkening", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/limb-darkening"}, {"uid": "github/nespinoza/juliet", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/juliet", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/juliet"}, {"uid": "github/nespinoza/ld-exosim", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/ld-exosim", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/ld-exosim"}, {"uid": "github/nespinoza/exonailer", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/exonailer", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/exonailer"}, {"uid": "github/esandford/EightBitTransit", "html_url": "https://rseng.github.io/software/repository/github/esandford/EightBitTransit", "api_url": "https://rseng.github.io/software/api/repos/github/esandford/EightBitTransit"}, {"uid": "github/david-barnett/microViz", "html_url": "https://rseng.github.io/software/repository/github/david-barnett/microViz", "api_url": "https://rseng.github.io/software/api/repos/github/david-barnett/microViz"}, {"uid": "github/HannahMDoherty/ChemGAPP", "html_url": "https://rseng.github.io/software/repository/github/HannahMDoherty/ChemGAPP", "api_url": "https://rseng.github.io/software/api/repos/github/HannahMDoherty/ChemGAPP"}, {"uid": "github/ChemaPalencia/M_SMiLe", "html_url": "https://rseng.github.io/software/repository/github/ChemaPalencia/M_SMiLe", "api_url": "https://rseng.github.io/software/api/repos/github/ChemaPalencia/M_SMiLe"}, {"uid": "github/RTIP/artip", "html_url": "https://rseng.github.io/software/repository/github/RTIP/artip", "api_url": "https://rseng.github.io/software/api/repos/github/RTIP/artip"}, {"uid": "github/zheng-lh/UBER", "html_url": "https://rseng.github.io/software/repository/github/zheng-lh/UBER", "api_url": "https://rseng.github.io/software/api/repos/github/zheng-lh/UBER"}, {"uid": "github/rhenkin/visxhclust", "html_url": "https://rseng.github.io/software/repository/github/rhenkin/visxhclust", "api_url": "https://rseng.github.io/software/api/repos/github/rhenkin/visxhclust"}, {"uid": "github/HEML/HEML", "html_url": "https://rseng.github.io/software/repository/github/HEML/HEML", "api_url": "https://rseng.github.io/software/api/repos/github/HEML/HEML"}, {"uid": "github/amrex-astro/MAESTRO", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/MAESTRO", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/MAESTRO"}, {"uid": "github/amrex-astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Nyx"}, {"uid": "github/amrex-astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Castro"}, {"uid": "github/Glogobyte/miRGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Glogobyte/miRGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Glogobyte/miRGalaxy"}, {"uid": "github/daddeptr/Needlets", "html_url": "https://rseng.github.io/software/repository/github/daddeptr/Needlets", "api_url": "https://rseng.github.io/software/api/repos/github/daddeptr/Needlets"}, {"uid": "github/ewatercycle/era5cli", "html_url": "https://rseng.github.io/software/repository/github/ewatercycle/era5cli", "api_url": "https://rseng.github.io/software/api/repos/github/ewatercycle/era5cli"}, {"uid": "github/GBLille/MassiveFold", "html_url": "https://rseng.github.io/software/repository/github/GBLille/MassiveFold", "api_url": "https://rseng.github.io/software/api/repos/github/GBLille/MassiveFold"}, {"uid": "github/dominic-chang/Krang.jl", "html_url": "https://rseng.github.io/software/repository/github/dominic-chang/Krang.jl", "api_url": "https://rseng.github.io/software/api/repos/github/dominic-chang/Krang.jl"}, {"uid": "github/labcbb/SqueezeCall", "html_url": "https://rseng.github.io/software/repository/github/labcbb/SqueezeCall", "api_url": "https://rseng.github.io/software/api/repos/github/labcbb/SqueezeCall"}, {"uid": "github/zarr-developers/zarr-python", "html_url": "https://rseng.github.io/software/repository/github/zarr-developers/zarr-python", "api_url": "https://rseng.github.io/software/api/repos/github/zarr-developers/zarr-python"}, {"uid": "github/Cosmoglobe/zodipy", "html_url": "https://rseng.github.io/software/repository/github/Cosmoglobe/zodipy", "api_url": "https://rseng.github.io/software/api/repos/github/Cosmoglobe/zodipy"}, {"uid": "github/SPARC-X/SPARC-X-API", "html_url": "https://rseng.github.io/software/repository/github/SPARC-X/SPARC-X-API", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-X/SPARC-X-API"}, {"uid": "github/elnjensen/Tapir", "html_url": "https://rseng.github.io/software/repository/github/elnjensen/Tapir", "api_url": "https://rseng.github.io/software/api/repos/github/elnjensen/Tapir"}, {"uid": "github/smandal97/Sprout", "html_url": "https://rseng.github.io/software/repository/github/smandal97/Sprout", "api_url": "https://rseng.github.io/software/api/repos/github/smandal97/Sprout"}, {"uid": "github/paulmorio/gincco", "html_url": "https://rseng.github.io/software/repository/github/paulmorio/gincco", "api_url": "https://rseng.github.io/software/api/repos/github/paulmorio/gincco"}, {"uid": "github/kylemede/ExoSOFT", "html_url": "https://rseng.github.io/software/repository/github/kylemede/ExoSOFT", "api_url": "https://rseng.github.io/software/api/repos/github/kylemede/ExoSOFT"}, {"uid": "github/CaNS-World/CaNS-Fizzy", "html_url": "https://rseng.github.io/software/repository/github/CaNS-World/CaNS-Fizzy", "api_url": "https://rseng.github.io/software/api/repos/github/CaNS-World/CaNS-Fizzy"}, {"uid": "github/podondra/eidein", "html_url": "https://rseng.github.io/software/repository/github/podondra/eidein", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/eidein"}, {"uid": "github/podondra/bayesian-sznet", "html_url": "https://rseng.github.io/software/repository/github/podondra/bayesian-sznet", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/bayesian-sznet"}, {"uid": "github/dpryan79/MethylDackel", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/MethylDackel", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/MethylDackel"}, {"uid": "github/dpryan79/pyBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/pyBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/pyBigWig"}, {"uid": "github/dpryan79/libBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/libBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/libBigWig"}, {"uid": "github/RabadanLab/arcasHLA", "html_url": "https://rseng.github.io/software/repository/github/RabadanLab/arcasHLA", "api_url": "https://rseng.github.io/software/api/repos/github/RabadanLab/arcasHLA"}, {"uid": "github/TeamLEGWORK/LEGWORK", "html_url": "https://rseng.github.io/software/repository/github/TeamLEGWORK/LEGWORK", "api_url": "https://rseng.github.io/software/api/repos/github/TeamLEGWORK/LEGWORK"}, {"uid": "github/rehamelkholy/NutMaat", "html_url": "https://rseng.github.io/software/repository/github/rehamelkholy/NutMaat", "api_url": "https://rseng.github.io/software/api/repos/github/rehamelkholy/NutMaat"}, {"uid": "github/carrerajimenez/pyCatIndex", "html_url": "https://rseng.github.io/software/repository/github/carrerajimenez/pyCatIndex", "api_url": "https://rseng.github.io/software/api/repos/github/carrerajimenez/pyCatIndex"}, {"uid": "github/FreBio/komics", "html_url": "https://rseng.github.io/software/repository/github/FreBio/komics", "api_url": "https://rseng.github.io/software/api/repos/github/FreBio/komics"}, {"uid": "github/s-goldman/Dusty-Evolved-Star-Kit", "html_url": "https://rseng.github.io/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", "api_url": "https://rseng.github.io/software/api/repos/github/s-goldman/Dusty-Evolved-Star-Kit"}, {"uid": "github/sb-ncbr/golem", "html_url": "https://rseng.github.io/software/repository/github/sb-ncbr/golem", "api_url": "https://rseng.github.io/software/api/repos/github/sb-ncbr/golem"}, {"uid": "github/JoshSchramm94/validateHOT", "html_url": "https://rseng.github.io/software/repository/github/JoshSchramm94/validateHOT", "api_url": "https://rseng.github.io/software/api/repos/github/JoshSchramm94/validateHOT"}, {"uid": "github/hsso/crete", "html_url": "https://rseng.github.io/software/repository/github/hsso/crete", "api_url": "https://rseng.github.io/software/api/repos/github/hsso/crete"}, {"uid": "github/tBilby/tBilby", "html_url": "https://rseng.github.io/software/repository/github/tBilby/tBilby", "api_url": "https://rseng.github.io/software/api/repos/github/tBilby/tBilby"}, {"uid": "github/lab-medvedeva/GADES-main", "html_url": "https://rseng.github.io/software/repository/github/lab-medvedeva/GADES-main", "api_url": "https://rseng.github.io/software/api/repos/github/lab-medvedeva/GADES-main"}, {"uid": "github/rksyouyou/SASOM-analysis", "html_url": "https://rseng.github.io/software/repository/github/rksyouyou/SASOM-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/rksyouyou/SASOM-analysis"}, {"uid": "github/ks905383/xagg", "html_url": "https://rseng.github.io/software/repository/github/ks905383/xagg", "api_url": "https://rseng.github.io/software/api/repos/github/ks905383/xagg"}, {"uid": "github/Wytamma/snk", "html_url": "https://rseng.github.io/software/repository/github/Wytamma/snk", "api_url": "https://rseng.github.io/software/api/repos/github/Wytamma/snk"}, {"uid": "github/Dylan-Aliberti/Kepler-Collisions", "html_url": "https://rseng.github.io/software/repository/github/Dylan-Aliberti/Kepler-Collisions", "api_url": "https://rseng.github.io/software/api/repos/github/Dylan-Aliberti/Kepler-Collisions"}, {"uid": "github/danxhuber/galclassify", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/galclassify", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/galclassify"}, {"uid": "github/danxhuber/evolstate", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/evolstate", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/evolstate"}, {"uid": "github/GeneDx/scramble", "html_url": "https://rseng.github.io/software/repository/github/GeneDx/scramble", "api_url": "https://rseng.github.io/software/api/repos/github/GeneDx/scramble"}, {"uid": "github/tyo-nu/MINE-app", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/MINE-app", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/MINE-app"}, {"uid": "github/tyo-nu/pickaxe_paper", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/pickaxe_paper", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/pickaxe_paper"}, {"uid": "github/muctadir/lama", "html_url": "https://rseng.github.io/software/repository/github/muctadir/lama", "api_url": "https://rseng.github.io/software/api/repos/github/muctadir/lama"}, {"uid": "github/davidemms/OrthoFinder", "html_url": "https://rseng.github.io/software/repository/github/davidemms/OrthoFinder", "api_url": "https://rseng.github.io/software/api/repos/github/davidemms/OrthoFinder"}, {"uid": "github/Caltech-IPAC/Montage", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/Montage", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/Montage"}, {"uid": "github/Caltech-IPAC/kete", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/kete", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/kete"}, {"uid": "github/akashdhruv/BoxKit", "html_url": "https://rseng.github.io/software/repository/github/akashdhruv/BoxKit", "api_url": "https://rseng.github.io/software/api/repos/github/akashdhruv/BoxKit"}, {"uid": "github/llt1836/TE-HI-GCN", "html_url": "https://rseng.github.io/software/repository/github/llt1836/TE-HI-GCN", "api_url": "https://rseng.github.io/software/api/repos/github/llt1836/TE-HI-GCN"}, {"uid": "github/WangLabTHU/DeSP", "html_url": "https://rseng.github.io/software/repository/github/WangLabTHU/DeSP", "api_url": "https://rseng.github.io/software/api/repos/github/WangLabTHU/DeSP"}, {"uid": "github/bio-ontology-research-group/deepgoplus", "html_url": "https://rseng.github.io/software/repository/github/bio-ontology-research-group/deepgoplus", "api_url": "https://rseng.github.io/software/api/repos/github/bio-ontology-research-group/deepgoplus"}, {"uid": "github/A-Davies/LensCNN", "html_url": "https://rseng.github.io/software/repository/github/A-Davies/LensCNN", "api_url": "https://rseng.github.io/software/api/repos/github/A-Davies/LensCNN"}, {"uid": "github/grdspcht/ggret", "html_url": "https://rseng.github.io/software/repository/github/grdspcht/ggret", "api_url": "https://rseng.github.io/software/api/repos/github/grdspcht/ggret"}, {"uid": "github/pr2database/pr2-primers", "html_url": "https://rseng.github.io/software/repository/github/pr2database/pr2-primers", "api_url": "https://rseng.github.io/software/api/repos/github/pr2database/pr2-primers"}, {"uid": "github/SpaceML/GalaxyGAN", "html_url": "https://rseng.github.io/software/repository/github/SpaceML/GalaxyGAN", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceML/GalaxyGAN"}, {"uid": "github/SWIFTSIM/SOAP", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/SOAP", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/SOAP"}, {"uid": "github/SWIFTSIM/emulator", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/emulator", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/emulator"}, {"uid": "github/epruesse/SINA", "html_url": "https://rseng.github.io/software/repository/github/epruesse/SINA", "api_url": "https://rseng.github.io/software/api/repos/github/epruesse/SINA"}, {"uid": "github/li-yangyang/lotus", "html_url": "https://rseng.github.io/software/repository/github/li-yangyang/lotus", "api_url": "https://rseng.github.io/software/api/repos/github/li-yangyang/lotus"}, {"uid": "github/OPM/opm-simulators", "html_url": "https://rseng.github.io/software/repository/github/OPM/opm-simulators", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/opm-simulators"}, {"uid": "github/OPM/pyopmspe11", "html_url": "https://rseng.github.io/software/repository/github/OPM/pyopmspe11", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/pyopmspe11"}, {"uid": "github/bwa-mem2/bwa-mem2", "html_url": "https://rseng.github.io/software/repository/github/bwa-mem2/bwa-mem2", "api_url": "https://rseng.github.io/software/api/repos/github/bwa-mem2/bwa-mem2"}, {"uid": "github/stammler/dustpy", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpy", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpy"}, {"uid": "github/stammler/simframe", "html_url": "https://rseng.github.io/software/repository/github/stammler/simframe", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/simframe"}, {"uid": "github/stammler/dustpylib", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpylib", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpylib"}, {"uid": "github/nluetts/NoisySignalIntegration.jl", "html_url": "https://rseng.github.io/software/repository/github/nluetts/NoisySignalIntegration.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nluetts/NoisySignalIntegration.jl"}, {"uid": "github/DingshanDeng/ysoisochrone", "html_url": "https://rseng.github.io/software/repository/github/DingshanDeng/ysoisochrone", "api_url": "https://rseng.github.io/software/api/repos/github/DingshanDeng/ysoisochrone"}, {"uid": "github/WilsonGregory/ginjax", "html_url": "https://rseng.github.io/software/repository/github/WilsonGregory/ginjax", "api_url": "https://rseng.github.io/software/api/repos/github/WilsonGregory/ginjax"}, {"uid": "github/mauropieroni/fastpta", "html_url": "https://rseng.github.io/software/repository/github/mauropieroni/fastpta", "api_url": "https://rseng.github.io/software/api/repos/github/mauropieroni/fastpta"}, {"uid": "github/brian-team/brian2", "html_url": "https://rseng.github.io/software/repository/github/brian-team/brian2", "api_url": "https://rseng.github.io/software/api/repos/github/brian-team/brian2"}, {"uid": "github/BartoszBartmanski/StoSpa2", "html_url": "https://rseng.github.io/software/repository/github/BartoszBartmanski/StoSpa2", "api_url": "https://rseng.github.io/software/api/repos/github/BartoszBartmanski/StoSpa2"}, {"uid": "github/macrocosme/time_domain_astronomy_sandbox", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/time_domain_astronomy_sandbox", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/time_domain_astronomy_sandbox"}, {"uid": "github/macrocosme/amber_meta", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/amber_meta", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/amber_meta"}, {"uid": "github/cmbant/getdist", "html_url": "https://rseng.github.io/software/repository/github/cmbant/getdist", "api_url": "https://rseng.github.io/software/api/repos/github/cmbant/getdist"}, {"uid": "github/egonw/bacting", "html_url": "https://rseng.github.io/software/repository/github/egonw/bacting", "api_url": "https://rseng.github.io/software/api/repos/github/egonw/bacting"}, {"uid": "github/johannes-titz/cofad", "html_url": "https://rseng.github.io/software/repository/github/johannes-titz/cofad", "api_url": "https://rseng.github.io/software/api/repos/github/johannes-titz/cofad"}, {"uid": "github/seawander/centerRadon", "html_url": "https://rseng.github.io/software/repository/github/seawander/centerRadon", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/centerRadon"}, {"uid": "github/seawander/DebrisDiskFM", "html_url": "https://rseng.github.io/software/repository/github/seawander/DebrisDiskFM", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/DebrisDiskFM"}, {"uid": "github/JixingGE/GGCHEMPY", "html_url": "https://rseng.github.io/software/repository/github/JixingGE/GGCHEMPY", "api_url": "https://rseng.github.io/software/api/repos/github/JixingGE/GGCHEMPY"}, {"uid": "github/genostats/LowKi", "html_url": "https://rseng.github.io/software/repository/github/genostats/LowKi", "api_url": "https://rseng.github.io/software/api/repos/github/genostats/LowKi"}, {"uid": "github/kokkos/kokkos-fft", "html_url": "https://rseng.github.io/software/repository/github/kokkos/kokkos-fft", "api_url": "https://rseng.github.io/software/api/repos/github/kokkos/kokkos-fft"}, {"uid": "github/yair111/AnalyticLC", "html_url": "https://rseng.github.io/software/repository/github/yair111/AnalyticLC", "api_url": "https://rseng.github.io/software/api/repos/github/yair111/AnalyticLC"}, {"uid": "github/astro-informatics/harmonic", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/harmonic", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/harmonic"}, {"uid": "github/astro-informatics/s2fft", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2fft", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2fft"}, {"uid": "github/astro-informatics/DarkMappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/DarkMappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/DarkMappy"}, {"uid": "github/astro-informatics/flaglet-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flaglet-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flaglet-archive"}, {"uid": "github/astro-informatics/massmappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/massmappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/massmappy"}, {"uid": "github/astro-informatics/flag-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flag-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flag-archive"}, {"uid": "github/astro-informatics/sleplet", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/sleplet", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/sleplet"}, {"uid": "github/astro-informatics/RequiSim", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/RequiSim", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/RequiSim"}, {"uid": "github/astro-informatics/s2", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2"}, {"uid": "github/astro-informatics/QuantifAI", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/QuantifAI", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/QuantifAI"}, {"uid": "github/astro-informatics/ssht", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/ssht", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/ssht"}, {"uid": "github/astro-informatics/s2let", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2let", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2let"}, {"uid": "github/astro-informatics/stringgen", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/stringgen", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/stringgen"}, {"uid": "github/astro-informatics/comb", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/comb", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/comb"}, {"uid": "github/dkoslicki/TAMPA", "html_url": "https://rseng.github.io/software/repository/github/dkoslicki/TAMPA", "api_url": "https://rseng.github.io/software/api/repos/github/dkoslicki/TAMPA"}, {"uid": "github/ahoward-cf/ppmap", "html_url": "https://rseng.github.io/software/repository/github/ahoward-cf/ppmap", "api_url": "https://rseng.github.io/software/api/repos/github/ahoward-cf/ppmap"}, {"uid": "github/CoLRev-Environment/bib-dedupe", "html_url": "https://rseng.github.io/software/repository/github/CoLRev-Environment/bib-dedupe", "api_url": "https://rseng.github.io/software/api/repos/github/CoLRev-Environment/bib-dedupe"}, {"uid": "github/hjozwiak-umk/bigos_h2he", "html_url": "https://rseng.github.io/software/repository/github/hjozwiak-umk/bigos_h2he", "api_url": "https://rseng.github.io/software/api/repos/github/hjozwiak-umk/bigos_h2he"}, {"uid": "github/Peter-Hogg/SLAP2_Utils", "html_url": "https://rseng.github.io/software/repository/github/Peter-Hogg/SLAP2_Utils", "api_url": "https://rseng.github.io/software/api/repos/github/Peter-Hogg/SLAP2_Utils"}, {"uid": "github/sievers/corrcal", "html_url": "https://rseng.github.io/software/repository/github/sievers/corrcal", "api_url": "https://rseng.github.io/software/api/repos/github/sievers/corrcal"}, {"uid": "github/timstaley/voevent-parse", "html_url": "https://rseng.github.io/software/repository/github/timstaley/voevent-parse", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/voevent-parse"}, {"uid": "github/timstaley/chimenea", "html_url": "https://rseng.github.io/software/repository/github/timstaley/chimenea", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/chimenea"}, {"uid": "github/timstaley/amisurvey", "html_url": "https://rseng.github.io/software/repository/github/timstaley/amisurvey", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/amisurvey"}, {"uid": "github/liulab-dfci/TRUST4", "html_url": "https://rseng.github.io/software/repository/github/liulab-dfci/TRUST4", "api_url": "https://rseng.github.io/software/api/repos/github/liulab-dfci/TRUST4"}, {"uid": "github/cran/irtplay", "html_url": "https://rseng.github.io/software/repository/github/cran/irtplay", "api_url": "https://rseng.github.io/software/api/repos/github/cran/irtplay"}, {"uid": "github/ComputationalBiomechanicsLab/opensim-creator", "html_url": "https://rseng.github.io/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalBiomechanicsLab/opensim-creator"}, {"uid": "github/mlaparie/sigh", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/sigh", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/sigh"}, {"uid": "github/mlaparie/phidget-tools", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/phidget-tools", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/phidget-tools"}, {"uid": "github/adamantine-sim/adamantine", "html_url": "https://rseng.github.io/software/repository/github/adamantine-sim/adamantine", "api_url": "https://rseng.github.io/software/api/repos/github/adamantine-sim/adamantine"}, {"uid": "github/amkozlov/raxml-ng", "html_url": "https://rseng.github.io/software/repository/github/amkozlov/raxml-ng", "api_url": "https://rseng.github.io/software/api/repos/github/amkozlov/raxml-ng"}, {"uid": "github/Eventdisplay/Eventdisplay", "html_url": "https://rseng.github.io/software/repository/github/Eventdisplay/Eventdisplay", "api_url": "https://rseng.github.io/software/api/repos/github/Eventdisplay/Eventdisplay"}, {"uid": "github/CosmoStatGW/MGCosmoPop", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/MGCosmoPop", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/MGCosmoPop"}, {"uid": "github/CosmoStatGW/DarkSirensStat", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/DarkSirensStat", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/DarkSirensStat"}, {"uid": "github/CosmoStatGW/gwfast", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/gwfast", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/gwfast"}, {"uid": "github/CosmoStatGW/WF4Py", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/WF4Py", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/WF4Py"}, {"uid": "github/yungkipreos/Min-CaLM", "html_url": "https://rseng.github.io/software/repository/github/yungkipreos/Min-CaLM", "api_url": "https://rseng.github.io/software/api/repos/github/yungkipreos/Min-CaLM"}, {"uid": "github/fccoelho/epigrass", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epigrass", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epigrass"}, {"uid": "github/fccoelho/epimodels", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epimodels", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epimodels"}, {"uid": "github/CollinErickson/GauPro", "html_url": "https://rseng.github.io/software/repository/github/CollinErickson/GauPro", "api_url": "https://rseng.github.io/software/api/repos/github/CollinErickson/GauPro"}, {"uid": "github/samirmartins/pydaq", "html_url": "https://rseng.github.io/software/repository/github/samirmartins/pydaq", "api_url": "https://rseng.github.io/software/api/repos/github/samirmartins/pydaq"}, {"uid": "github/nombac/optab", "html_url": "https://rseng.github.io/software/repository/github/nombac/optab", "api_url": "https://rseng.github.io/software/api/repos/github/nombac/optab"}, {"uid": "github/cuDisc/cuDisc", "html_url": "https://rseng.github.io/software/repository/github/cuDisc/cuDisc", "api_url": "https://rseng.github.io/software/api/repos/github/cuDisc/cuDisc"}, {"uid": "github/tbep-tech/tbeptools", "html_url": "https://rseng.github.io/software/repository/github/tbep-tech/tbeptools", "api_url": "https://rseng.github.io/software/api/repos/github/tbep-tech/tbeptools"}, {"uid": "github/deaglanbartlett/symbolic_pofk", "html_url": "https://rseng.github.io/software/repository/github/deaglanbartlett/symbolic_pofk", "api_url": "https://rseng.github.io/software/api/repos/github/deaglanbartlett/symbolic_pofk"}, {"uid": "github/xiaofengsong/pHisPred", "html_url": "https://rseng.github.io/software/repository/github/xiaofengsong/pHisPred", "api_url": "https://rseng.github.io/software/api/repos/github/xiaofengsong/pHisPred"}, {"uid": "github/gmbrandt/HTOF", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/HTOF", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/HTOF"}, {"uid": "github/gmbrandt/xwavecal", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/xwavecal", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/xwavecal"}, {"uid": "github/hyperopt/hyperopt", "html_url": "https://rseng.github.io/software/repository/github/hyperopt/hyperopt", "api_url": "https://rseng.github.io/software/api/repos/github/hyperopt/hyperopt"}, {"uid": "github/ckarako/RRATtrap", "html_url": "https://rseng.github.io/software/repository/github/ckarako/RRATtrap", "api_url": "https://rseng.github.io/software/api/repos/github/ckarako/RRATtrap"}, {"uid": "github/planck-npipe/hillipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/hillipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/hillipop"}, {"uid": "github/planck-npipe/lollipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/lollipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/lollipop"}, {"uid": "github/jonescompneurolab/hnn-core", "html_url": "https://rseng.github.io/software/repository/github/jonescompneurolab/hnn-core", "api_url": "https://rseng.github.io/software/api/repos/github/jonescompneurolab/hnn-core"}, {"uid": "github/JohannesBuchner/BXA", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/BXA", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/BXA"}, {"uid": "github/JohannesBuchner/nway", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/nway", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/nway"}, {"uid": "github/JohannesBuchner/UltraNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/UltraNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/UltraNest"}, {"uid": "github/JohannesBuchner/PyMultiNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/PyMultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/PyMultiNest"}, {"uid": "github/ezquiaga/phazap", "html_url": "https://rseng.github.io/software/repository/github/ezquiaga/phazap", "api_url": "https://rseng.github.io/software/api/repos/github/ezquiaga/phazap"}, {"uid": "github/pcubillos/mc3", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/mc3", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/mc3"}, {"uid": "github/pcubillos/pyratbay", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/pyratbay", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/pyratbay"}, {"uid": "github/pcubillos/repack", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/repack", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/repack"}, {"uid": "github/pcubillos/rate", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/rate", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/rate"}, {"uid": "github/pcubillos/gen_tso", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/gen_tso", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/gen_tso"}, {"uid": "github/cabb99/open3spn2", "html_url": "https://rseng.github.io/software/repository/github/cabb99/open3spn2", "api_url": "https://rseng.github.io/software/api/repos/github/cabb99/open3spn2"}, {"uid": "github/vergauwenthomas/MetObs_toolkit", "html_url": "https://rseng.github.io/software/repository/github/vergauwenthomas/MetObs_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/vergauwenthomas/MetObs_toolkit"}, {"uid": "github/jet-net/JetNet", "html_url": "https://rseng.github.io/software/repository/github/jet-net/JetNet", "api_url": "https://rseng.github.io/software/api/repos/github/jet-net/JetNet"}, {"uid": "github/MedMaxLab/selfEEG", "html_url": "https://rseng.github.io/software/repository/github/MedMaxLab/selfEEG", "api_url": "https://rseng.github.io/software/api/repos/github/MedMaxLab/selfEEG"}, {"uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", "html_url": "https://rseng.github.io/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", "api_url": "https://rseng.github.io/software/api/repos/github/Biomedical-Imaging-Group/Steer-n-Detect"}, {"uid": "github/andersen-lab/html", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/html", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/html"}, {"uid": "github/andersen-lab/Freyja", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/Freyja", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/Freyja"}, {"uid": "github/andersen-lab/ivar", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/ivar", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/ivar"}, {"uid": "github/openjournals/joss", "html_url": "https://rseng.github.io/software/repository/github/openjournals/joss", "api_url": "https://rseng.github.io/software/api/repos/github/openjournals/joss"}, {"uid": "github/fhtouma/subgen2", "html_url": "https://rseng.github.io/software/repository/github/fhtouma/subgen2", "api_url": "https://rseng.github.io/software/api/repos/github/fhtouma/subgen2"}, {"uid": "github/ryansmcgee/seirsplus", "html_url": "https://rseng.github.io/software/repository/github/ryansmcgee/seirsplus", "api_url": "https://rseng.github.io/software/api/repos/github/ryansmcgee/seirsplus"}, {"uid": "github/agurvich/FIRE_studio", "html_url": "https://rseng.github.io/software/repository/github/agurvich/FIRE_studio", "api_url": "https://rseng.github.io/software/api/repos/github/agurvich/FIRE_studio"}, {"uid": "github/vortex-exoplanet/VIP", "html_url": "https://rseng.github.io/software/repository/github/vortex-exoplanet/VIP", "api_url": "https://rseng.github.io/software/api/repos/github/vortex-exoplanet/VIP"}, {"uid": "github/deweylab/RSEM", "html_url": "https://rseng.github.io/software/repository/github/deweylab/RSEM", "api_url": "https://rseng.github.io/software/api/repos/github/deweylab/RSEM"}, {"uid": "github/ZJUFanLab/scTITANS", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/scTITANS", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/scTITANS"}, {"uid": "github/ZJUFanLab/bulk2space", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/bulk2space", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/bulk2space"}, {"uid": "github/nmslib/hnswlib", "html_url": "https://rseng.github.io/software/repository/github/nmslib/hnswlib", "api_url": "https://rseng.github.io/software/api/repos/github/nmslib/hnswlib"}, {"uid": "github/rudolffu/pyfosc", "html_url": "https://rseng.github.io/software/repository/github/rudolffu/pyfosc", "api_url": "https://rseng.github.io/software/api/repos/github/rudolffu/pyfosc"}, {"uid": "github/lucaskorol21/GO-RXR", "html_url": "https://rseng.github.io/software/repository/github/lucaskorol21/GO-RXR", "api_url": "https://rseng.github.io/software/api/repos/github/lucaskorol21/GO-RXR"}, {"uid": "github/achael/eht-imaging", "html_url": "https://rseng.github.io/software/repository/github/achael/eht-imaging", "api_url": "https://rseng.github.io/software/api/repos/github/achael/eht-imaging"}, {"uid": "github/Hoecker-Lab/atligator", "html_url": "https://rseng.github.io/software/repository/github/Hoecker-Lab/atligator", "api_url": "https://rseng.github.io/software/api/repos/github/Hoecker-Lab/atligator"}, {"uid": "github/alastair-droop/fqtools", "html_url": "https://rseng.github.io/software/repository/github/alastair-droop/fqtools", "api_url": "https://rseng.github.io/software/api/repos/github/alastair-droop/fqtools"}, {"uid": "github/xzackli/WignerFamilies.jl", "html_url": "https://rseng.github.io/software/repository/github/xzackli/WignerFamilies.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xzackli/WignerFamilies.jl"}, {"uid": "github/cns-iu/HRA-supporting-information", "html_url": "https://rseng.github.io/software/repository/github/cns-iu/HRA-supporting-information", "api_url": "https://rseng.github.io/software/api/repos/github/cns-iu/HRA-supporting-information"}, {"uid": "github/QuantEcon/QuantEcon.py", "html_url": "https://rseng.github.io/software/repository/github/QuantEcon/QuantEcon.py", "api_url": "https://rseng.github.io/software/api/repos/github/QuantEcon/QuantEcon.py"}, {"uid": "github/barbarabodinier/fake", "html_url": "https://rseng.github.io/software/repository/github/barbarabodinier/fake", "api_url": "https://rseng.github.io/software/api/repos/github/barbarabodinier/fake"}, {"uid": "github/vferat/pycrostates", "html_url": "https://rseng.github.io/software/repository/github/vferat/pycrostates", "api_url": "https://rseng.github.io/software/api/repos/github/vferat/pycrostates"}, {"uid": "github/saberyoung/haffet", "html_url": "https://rseng.github.io/software/repository/github/saberyoung/haffet", "api_url": "https://rseng.github.io/software/api/repos/github/saberyoung/haffet"}, {"uid": "github/pmaxted/pycheops", "html_url": "https://rseng.github.io/software/repository/github/pmaxted/pycheops", "api_url": "https://rseng.github.io/software/api/repos/github/pmaxted/pycheops"}, {"uid": "github/ValeevGroup/mpqc", "html_url": "https://rseng.github.io/software/repository/github/ValeevGroup/mpqc", "api_url": "https://rseng.github.io/software/api/repos/github/ValeevGroup/mpqc"}, {"uid": "github/DerrickWood/kraken2", "html_url": "https://rseng.github.io/software/repository/github/DerrickWood/kraken2", "api_url": "https://rseng.github.io/software/api/repos/github/DerrickWood/kraken2"}, {"uid": "github/dmentipl/plonk", "html_url": "https://rseng.github.io/software/repository/github/dmentipl/plonk", "api_url": "https://rseng.github.io/software/api/repos/github/dmentipl/plonk"}, {"uid": "github/dtanoglidis/DeepShadows", "html_url": "https://rseng.github.io/software/repository/github/dtanoglidis/DeepShadows", "api_url": "https://rseng.github.io/software/api/repos/github/dtanoglidis/DeepShadows"}, {"uid": "github/henry2004y/Vlasiator.jl", "html_url": "https://rseng.github.io/software/repository/github/henry2004y/Vlasiator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/henry2004y/Vlasiator.jl"}, {"uid": "github/e-koch/FilFinder", "html_url": "https://rseng.github.io/software/repository/github/e-koch/FilFinder", "api_url": "https://rseng.github.io/software/api/repos/github/e-koch/FilFinder"}, {"uid": "github/NASA-Planetary-Science/Pade-disk-code", "html_url": "https://rseng.github.io/software/repository/github/NASA-Planetary-Science/Pade-disk-code", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-Planetary-Science/Pade-disk-code"}, {"uid": "github/tkzeng/Pangolin", "html_url": "https://rseng.github.io/software/repository/github/tkzeng/Pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/tkzeng/Pangolin"}, {"uid": "github/srdc/onfhir", "html_url": "https://rseng.github.io/software/repository/github/srdc/onfhir", "api_url": "https://rseng.github.io/software/api/repos/github/srdc/onfhir"}, {"uid": "github/wangjun1996/VisFeature", "html_url": "https://rseng.github.io/software/repository/github/wangjun1996/VisFeature", "api_url": "https://rseng.github.io/software/api/repos/github/wangjun1996/VisFeature"}, {"uid": "github/isglobal-brge/dsExposome", "html_url": "https://rseng.github.io/software/repository/github/isglobal-brge/dsExposome", "api_url": "https://rseng.github.io/software/api/repos/github/isglobal-brge/dsExposome"}, {"uid": "github/instituteofmechanics/paraqus", "html_url": "https://rseng.github.io/software/repository/github/instituteofmechanics/paraqus", "api_url": "https://rseng.github.io/software/api/repos/github/instituteofmechanics/paraqus"}, {"uid": "github/MichaelAbdul-Masih/SPAMMS", "html_url": "https://rseng.github.io/software/repository/github/MichaelAbdul-Masih/SPAMMS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelAbdul-Masih/SPAMMS"}, {"uid": "github/cpiaulet/smint", "html_url": "https://rseng.github.io/software/repository/github/cpiaulet/smint", "api_url": "https://rseng.github.io/software/api/repos/github/cpiaulet/smint"}, {"uid": "github/bxskdh/TSTA", "html_url": "https://rseng.github.io/software/repository/github/bxskdh/TSTA", "api_url": "https://rseng.github.io/software/api/repos/github/bxskdh/TSTA"}, {"uid": "github/mattevs24/reyna", "html_url": "https://rseng.github.io/software/repository/github/mattevs24/reyna", "api_url": "https://rseng.github.io/software/api/repos/github/mattevs24/reyna"}, {"uid": "github/genai-impact/ecologits", "html_url": "https://rseng.github.io/software/repository/github/genai-impact/ecologits", "api_url": "https://rseng.github.io/software/api/repos/github/genai-impact/ecologits"}, {"uid": "github/ginolhac/mapDamage", "html_url": "https://rseng.github.io/software/repository/github/ginolhac/mapDamage", "api_url": "https://rseng.github.io/software/api/repos/github/ginolhac/mapDamage"}, {"uid": "github/benhid/Sequoya", "html_url": "https://rseng.github.io/software/repository/github/benhid/Sequoya", "api_url": "https://rseng.github.io/software/api/repos/github/benhid/Sequoya"}, {"uid": "github/nigyta/dfast_core", "html_url": "https://rseng.github.io/software/repository/github/nigyta/dfast_core", "api_url": "https://rseng.github.io/software/api/repos/github/nigyta/dfast_core"}, {"uid": "github/samuelefiorini/tangle", "html_url": "https://rseng.github.io/software/repository/github/samuelefiorini/tangle", "api_url": "https://rseng.github.io/software/api/repos/github/samuelefiorini/tangle"}, {"uid": "github/ACEnglish/truvari", "html_url": "https://rseng.github.io/software/repository/github/ACEnglish/truvari", "api_url": "https://rseng.github.io/software/api/repos/github/ACEnglish/truvari"}, {"uid": "github/compomics/xilmass", "html_url": "https://rseng.github.io/software/repository/github/compomics/xilmass", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/xilmass"}, {"uid": "github/compomics/COSS", "html_url": "https://rseng.github.io/software/repository/github/compomics/COSS", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/COSS"}, {"uid": "github/compomics/DeepLC", "html_url": "https://rseng.github.io/software/repository/github/compomics/DeepLC", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/DeepLC"}, {"uid": "github/tbisbas/PDFchem", "html_url": "https://rseng.github.io/software/repository/github/tbisbas/PDFchem", "api_url": "https://rseng.github.io/software/api/repos/github/tbisbas/PDFchem"}, {"uid": "github/moldyn/msmhelper", "html_url": "https://rseng.github.io/software/repository/github/moldyn/msmhelper", "api_url": "https://rseng.github.io/software/api/repos/github/moldyn/msmhelper"}, {"uid": "github/carronj/plancklens", "html_url": "https://rseng.github.io/software/repository/github/carronj/plancklens", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/plancklens"}, {"uid": "github/carronj/lenspyx", "html_url": "https://rseng.github.io/software/repository/github/carronj/lenspyx", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/lenspyx"}, {"uid": "github/carronj/LensIt", "html_url": "https://rseng.github.io/software/repository/github/carronj/LensIt", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/LensIt"}, {"uid": "github/parkus/fiducial_flare", "html_url": "https://rseng.github.io/software/repository/github/parkus/fiducial_flare", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/fiducial_flare"}, {"uid": "github/parkus/ffd", "html_url": "https://rseng.github.io/software/repository/github/parkus/ffd", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/ffd"}, {"uid": "github/parkus/scicatalog", "html_url": "https://rseng.github.io/software/repository/github/parkus/scicatalog", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/scicatalog"}, {"uid": "github/medema-group/bigslice", "html_url": "https://rseng.github.io/software/repository/github/medema-group/bigslice", "api_url": "https://rseng.github.io/software/api/repos/github/medema-group/bigslice"}, {"uid": "github/dshawul/NebulaSEM", "html_url": "https://rseng.github.io/software/repository/github/dshawul/NebulaSEM", "api_url": "https://rseng.github.io/software/api/repos/github/dshawul/NebulaSEM"}, {"uid": "github/sefffal/Octofitter.jl", "html_url": "https://rseng.github.io/software/repository/github/sefffal/Octofitter.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sefffal/Octofitter.jl"}, {"uid": "github/T-CAIREM/physionet-build", "html_url": "https://rseng.github.io/software/repository/github/T-CAIREM/physionet-build", "api_url": "https://rseng.github.io/software/api/repos/github/T-CAIREM/physionet-build"}, {"uid": "github/pawni/BayesByHypernet", "html_url": "https://rseng.github.io/software/repository/github/pawni/BayesByHypernet", "api_url": "https://rseng.github.io/software/api/repos/github/pawni/BayesByHypernet"}, {"uid": "github/equib/equib", "html_url": "https://rseng.github.io/software/repository/github/equib/equib", "api_url": "https://rseng.github.io/software/api/repos/github/equib/equib"}, {"uid": "github/equib/pyEQUIB", "html_url": "https://rseng.github.io/software/repository/github/equib/pyEQUIB", "api_url": "https://rseng.github.io/software/api/repos/github/equib/pyEQUIB"}, {"uid": "github/cogent3/cogent3", "html_url": "https://rseng.github.io/software/repository/github/cogent3/cogent3", "api_url": "https://rseng.github.io/software/api/repos/github/cogent3/cogent3"}, {"uid": "github/hsocasnavarro/NICOLE", "html_url": "https://rseng.github.io/software/repository/github/hsocasnavarro/NICOLE", "api_url": "https://rseng.github.io/software/api/repos/github/hsocasnavarro/NICOLE"}, {"uid": "github/nathanchara/l1periodogram", "html_url": "https://rseng.github.io/software/repository/github/nathanchara/l1periodogram", "api_url": "https://rseng.github.io/software/api/repos/github/nathanchara/l1periodogram"}, {"uid": "github/ANP-Granular/ParticleTracking", "html_url": "https://rseng.github.io/software/repository/github/ANP-Granular/ParticleTracking", "api_url": "https://rseng.github.io/software/api/repos/github/ANP-Granular/ParticleTracking"}, {"uid": "github/freqtrade/freqtrade", "html_url": "https://rseng.github.io/software/repository/github/freqtrade/freqtrade", "api_url": "https://rseng.github.io/software/api/repos/github/freqtrade/freqtrade"}, {"uid": "github/MoreiraLAB/mensadb-open", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/mensadb-open", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/mensadb-open"}, {"uid": "github/MoreiraLAB/or", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/or", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/or"}, {"uid": "github/valboz/VBBinaryLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBBinaryLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBBinaryLensing"}, {"uid": "github/valboz/RTModel", "html_url": "https://rseng.github.io/software/repository/github/valboz/RTModel", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/RTModel"}, {"uid": "github/valboz/VBMicroLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBMicroLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBMicroLensing"}, {"uid": "github/ntcockroft/STarFish", "html_url": "https://rseng.github.io/software/repository/github/ntcockroft/STarFish", "api_url": "https://rseng.github.io/software/api/repos/github/ntcockroft/STarFish"}, {"uid": "github/mpip/pfft", "html_url": "https://rseng.github.io/software/repository/github/mpip/pfft", "api_url": "https://rseng.github.io/software/api/repos/github/mpip/pfft"}, {"uid": "github/mxwalbert/cohesivm", "html_url": "https://rseng.github.io/software/repository/github/mxwalbert/cohesivm", "api_url": "https://rseng.github.io/software/api/repos/github/mxwalbert/cohesivm"}, {"uid": "github/bpairet/mayo_hci", "html_url": "https://rseng.github.io/software/repository/github/bpairet/mayo_hci", "api_url": "https://rseng.github.io/software/api/repos/github/bpairet/mayo_hci"}, {"uid": "github/labjg/fibmeasure", "html_url": "https://rseng.github.io/software/repository/github/labjg/fibmeasure", "api_url": "https://rseng.github.io/software/api/repos/github/labjg/fibmeasure"}, {"uid": "github/ChristopherWilks/megadepth", "html_url": "https://rseng.github.io/software/repository/github/ChristopherWilks/megadepth", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopherWilks/megadepth"}, {"uid": "github/mathLab/PINA", "html_url": "https://rseng.github.io/software/repository/github/mathLab/PINA", "api_url": "https://rseng.github.io/software/api/repos/github/mathLab/PINA"}, {"uid": "github/UncertainLab/Enlsip.jl", "html_url": "https://rseng.github.io/software/repository/github/UncertainLab/Enlsip.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UncertainLab/Enlsip.jl"}, {"uid": "github/maddataanalyst/hextractor", "html_url": "https://rseng.github.io/software/repository/github/maddataanalyst/hextractor", "api_url": "https://rseng.github.io/software/api/repos/github/maddataanalyst/hextractor"}, {"uid": "github/hytrac/amber", "html_url": "https://rseng.github.io/software/repository/github/hytrac/amber", "api_url": "https://rseng.github.io/software/api/repos/github/hytrac/amber"}, {"uid": "github/FridleyLab/spatialGE", "html_url": "https://rseng.github.io/software/repository/github/FridleyLab/spatialGE", "api_url": "https://rseng.github.io/software/api/repos/github/FridleyLab/spatialGE"}, {"uid": "github/egpbos/barcode", "html_url": "https://rseng.github.io/software/repository/github/egpbos/barcode", "api_url": "https://rseng.github.io/software/api/repos/github/egpbos/barcode"}, {"uid": "github/GermanHeim/globalsearch-rs", "html_url": "https://rseng.github.io/software/repository/github/GermanHeim/globalsearch-rs", "api_url": "https://rseng.github.io/software/api/repos/github/GermanHeim/globalsearch-rs"}, {"uid": "github/opnavlab/sonic", "html_url": "https://rseng.github.io/software/repository/github/opnavlab/sonic", "api_url": "https://rseng.github.io/software/api/repos/github/opnavlab/sonic"}, {"uid": "github/labsyspharm/minerva-story", "html_url": "https://rseng.github.io/software/repository/github/labsyspharm/minerva-story", "api_url": "https://rseng.github.io/software/api/repos/github/labsyspharm/minerva-story"}, {"uid": "github/LuisGoncalves1/CLOWN", "html_url": "https://rseng.github.io/software/repository/github/LuisGoncalves1/CLOWN", "api_url": "https://rseng.github.io/software/api/repos/github/LuisGoncalves1/CLOWN"}, {"uid": "github/JCGonzS/mechnetor", "html_url": "https://rseng.github.io/software/repository/github/JCGonzS/mechnetor", "api_url": "https://rseng.github.io/software/api/repos/github/JCGonzS/mechnetor"}, {"uid": "github/ejsafron/SATCHEL", "html_url": "https://rseng.github.io/software/repository/github/ejsafron/SATCHEL", "api_url": "https://rseng.github.io/software/api/repos/github/ejsafron/SATCHEL"}, {"uid": "github/bbye98/mdcraft", "html_url": "https://rseng.github.io/software/repository/github/bbye98/mdcraft", "api_url": "https://rseng.github.io/software/api/repos/github/bbye98/mdcraft"}, {"uid": "github/danielreardon/scintools", "html_url": "https://rseng.github.io/software/repository/github/danielreardon/scintools", "api_url": "https://rseng.github.io/software/api/repos/github/danielreardon/scintools"}, {"uid": "github/CMakePP/CMakePPLang", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMakePPLang", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMakePPLang"}, {"uid": "github/CMakePP/CMinx", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMinx", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMinx"}, {"uid": "github/leraman/Hopla", "html_url": "https://rseng.github.io/software/repository/github/leraman/Hopla", "api_url": "https://rseng.github.io/software/api/repos/github/leraman/Hopla"}, {"uid": "github/alexander-pastukhov/bistablehistory", "html_url": "https://rseng.github.io/software/repository/github/alexander-pastukhov/bistablehistory", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-pastukhov/bistablehistory"}, {"uid": "github/deeptools/deepTools", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deepTools", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deepTools"}, {"uid": "github/deeptools/HiCExplorer", "html_url": "https://rseng.github.io/software/repository/github/deeptools/HiCExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/HiCExplorer"}, {"uid": "github/deeptools/py2bit", "html_url": "https://rseng.github.io/software/repository/github/deeptools/py2bit", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/py2bit"}, {"uid": "github/deeptools/deeptools_intervals", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deeptools_intervals", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deeptools_intervals"}, {"uid": "github/tongzhouxu/mashpit", "html_url": "https://rseng.github.io/software/repository/github/tongzhouxu/mashpit", "api_url": "https://rseng.github.io/software/api/repos/github/tongzhouxu/mashpit"}, {"uid": "github/PedroBarbosa/VETA", "html_url": "https://rseng.github.io/software/repository/github/PedroBarbosa/VETA", "api_url": "https://rseng.github.io/software/api/repos/github/PedroBarbosa/VETA"}, {"uid": "github/xavierdidelot/clonalorigin", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/clonalorigin", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/clonalorigin"}, {"uid": "github/xavierdidelot/ClonalFrameML", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/ClonalFrameML", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/ClonalFrameML"}, {"uid": "github/ckay314/OSPREI", "html_url": "https://rseng.github.io/software/repository/github/ckay314/OSPREI", "api_url": "https://rseng.github.io/software/api/repos/github/ckay314/OSPREI"}, {"uid": "github/jharno/cubep3m", "html_url": "https://rseng.github.io/software/repository/github/jharno/cubep3m", "api_url": "https://rseng.github.io/software/api/repos/github/jharno/cubep3m"}, {"uid": "github/hyosubkim/bayes-toolbox", "html_url": "https://rseng.github.io/software/repository/github/hyosubkim/bayes-toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/hyosubkim/bayes-toolbox"}, {"uid": "github/paulhjkelly/taskgraph-metaprogramming", "html_url": "https://rseng.github.io/software/repository/github/paulhjkelly/taskgraph-metaprogramming", "api_url": "https://rseng.github.io/software/api/repos/github/paulhjkelly/taskgraph-metaprogramming"}, {"uid": "github/johnpaulett/python-hl7", "html_url": "https://rseng.github.io/software/repository/github/johnpaulett/python-hl7", "api_url": "https://rseng.github.io/software/api/repos/github/johnpaulett/python-hl7"}, {"uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", "html_url": "https://rseng.github.io/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", "api_url": "https://rseng.github.io/software/api/repos/github/teamPSG/kNN_Sleep_Scorer_kNNSS"}, {"uid": "github/etempel/Bisous", "html_url": "https://rseng.github.io/software/repository/github/etempel/Bisous", "api_url": "https://rseng.github.io/software/api/repos/github/etempel/Bisous"}, {"uid": "github/c-zhou/yahs", "html_url": "https://rseng.github.io/software/repository/github/c-zhou/yahs", "api_url": "https://rseng.github.io/software/api/repos/github/c-zhou/yahs"}, {"uid": "github/Jwindler/PlotHiC", "html_url": "https://rseng.github.io/software/repository/github/Jwindler/PlotHiC", "api_url": "https://rseng.github.io/software/api/repos/github/Jwindler/PlotHiC"}, {"uid": "github/ERPI-UL/HELP-VRclient", "html_url": "https://rseng.github.io/software/repository/github/ERPI-UL/HELP-VRclient", "api_url": "https://rseng.github.io/software/api/repos/github/ERPI-UL/HELP-VRclient"}, {"uid": "github/morriscb/The-wiZZ", "html_url": "https://rseng.github.io/software/repository/github/morriscb/The-wiZZ", "api_url": "https://rseng.github.io/software/api/repos/github/morriscb/The-wiZZ"}, {"uid": "github/syasini/AstroPaint", "html_url": "https://rseng.github.io/software/repository/github/syasini/AstroPaint", "api_url": "https://rseng.github.io/software/api/repos/github/syasini/AstroPaint"}, {"uid": "github/glasgowlab/MAGPIE", "html_url": "https://rseng.github.io/software/repository/github/glasgowlab/MAGPIE", "api_url": "https://rseng.github.io/software/api/repos/github/glasgowlab/MAGPIE"}, {"uid": "github/najoshi/sickle", "html_url": "https://rseng.github.io/software/repository/github/najoshi/sickle", "api_url": "https://rseng.github.io/software/api/repos/github/najoshi/sickle"}, {"uid": "github/exobssim/rapoc-public", "html_url": "https://rseng.github.io/software/repository/github/exobssim/rapoc-public", "api_url": "https://rseng.github.io/software/api/repos/github/exobssim/rapoc-public"}, {"uid": "github/regonzar/paravt", "html_url": "https://rseng.github.io/software/repository/github/regonzar/paravt", "api_url": "https://rseng.github.io/software/api/repos/github/regonzar/paravt"}, {"uid": "github/doriancazeneuve/ODNet", "html_url": "https://rseng.github.io/software/repository/github/doriancazeneuve/ODNet", "api_url": "https://rseng.github.io/software/api/repos/github/doriancazeneuve/ODNet"}, {"uid": "github/cbrnr/sigviewer", "html_url": "https://rseng.github.io/software/repository/github/cbrnr/sigviewer", "api_url": "https://rseng.github.io/software/api/repos/github/cbrnr/sigviewer"}, {"uid": "github/cytham/nanovar", "html_url": "https://rseng.github.io/software/repository/github/cytham/nanovar", "api_url": "https://rseng.github.io/software/api/repos/github/cytham/nanovar"}, {"uid": "github/ajwheeler/korg.jl", "html_url": "https://rseng.github.io/software/repository/github/ajwheeler/korg.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ajwheeler/korg.jl"}, {"uid": "github/astromer-science/main-code", "html_url": "https://rseng.github.io/software/repository/github/astromer-science/main-code", "api_url": "https://rseng.github.io/software/api/repos/github/astromer-science/main-code"}, {"uid": "github/basehc/IPEV", "html_url": "https://rseng.github.io/software/repository/github/basehc/IPEV", "api_url": "https://rseng.github.io/software/api/repos/github/basehc/IPEV"}, {"uid": "github/variomes/sibtm-variomes", "html_url": "https://rseng.github.io/software/repository/github/variomes/sibtm-variomes", "api_url": "https://rseng.github.io/software/api/repos/github/variomes/sibtm-variomes"}, {"uid": "github/guaix-ucm/numina", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/numina", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/numina"}, {"uid": "github/guaix-ucm/megaradrp", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/megaradrp", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/megaradrp"}, {"uid": "github/Dulab2020/ARMT", "html_url": "https://rseng.github.io/software/repository/github/Dulab2020/ARMT", "api_url": "https://rseng.github.io/software/api/repos/github/Dulab2020/ARMT"}, {"uid": "github/highamm/sptotal", "html_url": "https://rseng.github.io/software/repository/github/highamm/sptotal", "api_url": "https://rseng.github.io/software/api/repos/github/highamm/sptotal"}, {"uid": "github/ijuric/MAPS", "html_url": "https://rseng.github.io/software/repository/github/ijuric/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/ijuric/MAPS"}, {"uid": "github/palaeoware/trevosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/trevosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/trevosim"}, {"uid": "github/palaeoware/revosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/revosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/revosim"}, {"uid": "github/AncientNLP/potnia", "html_url": "https://rseng.github.io/software/repository/github/AncientNLP/potnia", "api_url": "https://rseng.github.io/software/api/repos/github/AncientNLP/potnia"}, {"uid": "github/fast-data-transfer/fdt", "html_url": "https://rseng.github.io/software/repository/github/fast-data-transfer/fdt", "api_url": "https://rseng.github.io/software/api/repos/github/fast-data-transfer/fdt"}, {"uid": "github/wrenfold/wrenfold", "html_url": "https://rseng.github.io/software/repository/github/wrenfold/wrenfold", "api_url": "https://rseng.github.io/software/api/repos/github/wrenfold/wrenfold"}, {"uid": "github/extendr/extendr", "html_url": "https://rseng.github.io/software/repository/github/extendr/extendr", "api_url": "https://rseng.github.io/software/api/repos/github/extendr/extendr"}, {"uid": "github/Pithikos/C-Thread-Pool", "html_url": "https://rseng.github.io/software/repository/github/Pithikos/C-Thread-Pool", "api_url": "https://rseng.github.io/software/api/repos/github/Pithikos/C-Thread-Pool"}, {"uid": "github/climate-machine/Oceananigans.jl", "html_url": "https://rseng.github.io/software/repository/github/climate-machine/Oceananigans.jl", "api_url": "https://rseng.github.io/software/api/repos/github/climate-machine/Oceananigans.jl"}, {"uid": "github/gmrandazzo/libscientific", "html_url": "https://rseng.github.io/software/repository/github/gmrandazzo/libscientific", "api_url": "https://rseng.github.io/software/api/repos/github/gmrandazzo/libscientific"}, {"uid": "github/TeraTrees/TIPP", "html_url": "https://rseng.github.io/software/repository/github/TeraTrees/TIPP", "api_url": "https://rseng.github.io/software/api/repos/github/TeraTrees/TIPP"}, {"uid": "github/aspuru-guzik-group/funsies", "html_url": "https://rseng.github.io/software/repository/github/aspuru-guzik-group/funsies", "api_url": "https://rseng.github.io/software/api/repos/github/aspuru-guzik-group/funsies"}, {"uid": "github/soilwater/crnpy", "html_url": "https://rseng.github.io/software/repository/github/soilwater/crnpy", "api_url": "https://rseng.github.io/software/api/repos/github/soilwater/crnpy"}, {"uid": "github/johentsch/ms3", "html_url": "https://rseng.github.io/software/repository/github/johentsch/ms3", "api_url": "https://rseng.github.io/software/api/repos/github/johentsch/ms3"}, {"uid": "github/guangtunbenzhu/NonnegMFPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/NonnegMFPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/NonnegMFPy"}, {"uid": "github/guangtunbenzhu/SetCoverPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/SetCoverPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/SetCoverPy"}, {"uid": "github/fermisurfaces/IFermi", "html_url": "https://rseng.github.io/software/repository/github/fermisurfaces/IFermi", "api_url": "https://rseng.github.io/software/api/repos/github/fermisurfaces/IFermi"}, {"uid": "github/valerio-marra/CalPriorSNIa", "html_url": "https://rseng.github.io/software/repository/github/valerio-marra/CalPriorSNIa", "api_url": "https://rseng.github.io/software/api/repos/github/valerio-marra/CalPriorSNIa"}, {"uid": "github/mdtanker/polartoolkit", "html_url": "https://rseng.github.io/software/repository/github/mdtanker/polartoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/mdtanker/polartoolkit"}, {"uid": "github/nayu0419/stMMR", "html_url": "https://rseng.github.io/software/repository/github/nayu0419/stMMR", "api_url": "https://rseng.github.io/software/api/repos/github/nayu0419/stMMR"}, {"uid": "github/Nico-Curti/rFBP", "html_url": "https://rseng.github.io/software/repository/github/Nico-Curti/rFBP", "api_url": "https://rseng.github.io/software/api/repos/github/Nico-Curti/rFBP"}, {"uid": "github/leishenggit/CircleBase", "html_url": "https://rseng.github.io/software/repository/github/leishenggit/CircleBase", "api_url": "https://rseng.github.io/software/api/repos/github/leishenggit/CircleBase"}, {"uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl"}, {"uid": "github/baxmittens/VTUFileHandler", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/VTUFileHandler", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/VTUFileHandler"}, {"uid": "github/nutjunkie/IQmol", "html_url": "https://rseng.github.io/software/repository/github/nutjunkie/IQmol", "api_url": "https://rseng.github.io/software/api/repos/github/nutjunkie/IQmol"}, {"uid": "github/jgrembi/riskCommunicator", "html_url": "https://rseng.github.io/software/repository/github/jgrembi/riskCommunicator", "api_url": "https://rseng.github.io/software/api/repos/github/jgrembi/riskCommunicator"}, {"uid": "github/CIRADA-Tools/RM-Tools", "html_url": "https://rseng.github.io/software/repository/github/CIRADA-Tools/RM-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/CIRADA-Tools/RM-Tools"}, {"uid": "github/zhanglabtools/CASAVA", "html_url": "https://rseng.github.io/software/repository/github/zhanglabtools/CASAVA", "api_url": "https://rseng.github.io/software/api/repos/github/zhanglabtools/CASAVA"}, {"uid": "github/bradkav/EarthScatterLikelihood", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthScatterLikelihood", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthScatterLikelihood"}, {"uid": "github/bradkav/WIMpy_NREFT", "html_url": "https://rseng.github.io/software/repository/github/bradkav/WIMpy_NREFT", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/WIMpy_NREFT"}, {"uid": "github/bradkav/verne", "html_url": "https://rseng.github.io/software/repository/github/bradkav/verne", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/verne"}, {"uid": "github/bradkav/runDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/runDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/runDM"}, {"uid": "github/bradkav/AntiparticleDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/AntiparticleDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/AntiparticleDM"}, {"uid": "github/bradkav/DMRadon", "html_url": "https://rseng.github.io/software/repository/github/bradkav/DMRadon", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/DMRadon"}, {"uid": "github/bradkav/NbodyIMRI", "html_url": "https://rseng.github.io/software/repository/github/bradkav/NbodyIMRI", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/NbodyIMRI"}, {"uid": "github/bradkav/EarthShadow", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthShadow", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthShadow"}, {"uid": "github/bradkav/BlackHolesDarkDress", "html_url": "https://rseng.github.io/software/repository/github/bradkav/BlackHolesDarkDress", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/BlackHolesDarkDress"}, {"uid": "github/bradkav/CEvNS", "html_url": "https://rseng.github.io/software/repository/github/bradkav/CEvNS", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/CEvNS"}, {"uid": "github/londumas/redvsblue", "html_url": "https://rseng.github.io/software/repository/github/londumas/redvsblue", "api_url": "https://rseng.github.io/software/api/repos/github/londumas/redvsblue"}, {"uid": "github/csuhjhjhj/GCNCMI", "html_url": "https://rseng.github.io/software/repository/github/csuhjhjhj/GCNCMI", "api_url": "https://rseng.github.io/software/api/repos/github/csuhjhjhj/GCNCMI"}, {"uid": "github/ZhaoXM-Lab/metaMIC", "html_url": "https://rseng.github.io/software/repository/github/ZhaoXM-Lab/metaMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaoXM-Lab/metaMIC"}, {"uid": "github/ankilab/EvoVis", "html_url": "https://rseng.github.io/software/repository/github/ankilab/EvoVis", "api_url": "https://rseng.github.io/software/api/repos/github/ankilab/EvoVis"}, {"uid": "github/fabiorigamonti/bang", "html_url": "https://rseng.github.io/software/repository/github/fabiorigamonti/bang", "api_url": "https://rseng.github.io/software/api/repos/github/fabiorigamonti/bang"}, {"uid": "github/aksholokhov/pysr3", "html_url": "https://rseng.github.io/software/repository/github/aksholokhov/pysr3", "api_url": "https://rseng.github.io/software/api/repos/github/aksholokhov/pysr3"}, {"uid": "github/pjcigan/obsplanning", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/obsplanning", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/obsplanning"}, {"uid": "github/pjcigan/pysymlog", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/pysymlog", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/pysymlog"}, {"uid": "github/pjcigan/multicolorfits", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/multicolorfits", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/multicolorfits"}, {"uid": "github/Genentech/SPEX", "html_url": "https://rseng.github.io/software/repository/github/Genentech/SPEX", "api_url": "https://rseng.github.io/software/api/repos/github/Genentech/SPEX"}, {"uid": "github/nick-youngblut/gtdb_to_taxdump", "html_url": "https://rseng.github.io/software/repository/github/nick-youngblut/gtdb_to_taxdump", "api_url": "https://rseng.github.io/software/api/repos/github/nick-youngblut/gtdb_to_taxdump"}, {"uid": "github/gausspy/gausspy", "html_url": "https://rseng.github.io/software/repository/github/gausspy/gausspy", "api_url": "https://rseng.github.io/software/api/repos/github/gausspy/gausspy"}, {"uid": "github/thejackal360/OpenPelt-Public", "html_url": "https://rseng.github.io/software/repository/github/thejackal360/OpenPelt-Public", "api_url": "https://rseng.github.io/software/api/repos/github/thejackal360/OpenPelt-Public"}, {"uid": "github/samconnolly/DELightcurveSimulation", "html_url": "https://rseng.github.io/software/repository/github/samconnolly/DELightcurveSimulation", "api_url": "https://rseng.github.io/software/api/repos/github/samconnolly/DELightcurveSimulation"}, {"uid": "github/mikolmogorov/Flye", "html_url": "https://rseng.github.io/software/repository/github/mikolmogorov/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/mikolmogorov/Flye"}, {"uid": "github/MelanieKahl/MechAnalyze", "html_url": "https://rseng.github.io/software/repository/github/MelanieKahl/MechAnalyze", "api_url": "https://rseng.github.io/software/api/repos/github/MelanieKahl/MechAnalyze"}, {"uid": "github/waynebhayes/SpArcFiRe", "html_url": "https://rseng.github.io/software/repository/github/waynebhayes/SpArcFiRe", "api_url": "https://rseng.github.io/software/api/repos/github/waynebhayes/SpArcFiRe"}, {"uid": "github/canorve/GALFITools", "html_url": "https://rseng.github.io/software/repository/github/canorve/GALFITools", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/GALFITools"}, {"uid": "github/canorve/EllipSect", "html_url": "https://rseng.github.io/software/repository/github/canorve/EllipSect", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/EllipSect"}, {"uid": "github/ARC-OPT/wbc", "html_url": "https://rseng.github.io/software/repository/github/ARC-OPT/wbc", "api_url": "https://rseng.github.io/software/api/repos/github/ARC-OPT/wbc"}, {"uid": "github/filipezabala/voice", "html_url": "https://rseng.github.io/software/repository/github/filipezabala/voice", "api_url": "https://rseng.github.io/software/api/repos/github/filipezabala/voice"}, {"uid": "github/ArneTillmann/AuDoLab", "html_url": "https://rseng.github.io/software/repository/github/ArneTillmann/AuDoLab", "api_url": "https://rseng.github.io/software/api/repos/github/ArneTillmann/AuDoLab"}, {"uid": "github/glue-viz/glue", "html_url": "https://rseng.github.io/software/repository/github/glue-viz/glue", "api_url": "https://rseng.github.io/software/api/repos/github/glue-viz/glue"}, {"uid": "github/fhcrc/seqmagick", "html_url": "https://rseng.github.io/software/repository/github/fhcrc/seqmagick", "api_url": "https://rseng.github.io/software/api/repos/github/fhcrc/seqmagick"}, {"uid": "github/LaRoccaRaphael/MSI_recalibration", "html_url": "https://rseng.github.io/software/repository/github/LaRoccaRaphael/MSI_recalibration", "api_url": "https://rseng.github.io/software/api/repos/github/LaRoccaRaphael/MSI_recalibration"}, {"uid": "github/EXP-code/EXP", "html_url": "https://rseng.github.io/software/repository/github/EXP-code/EXP", "api_url": "https://rseng.github.io/software/api/repos/github/EXP-code/EXP"}, {"uid": "github/bartongroup/RoSA", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/RoSA", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/RoSA"}, {"uid": "github/bartongroup/yanosim", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/yanosim", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/yanosim"}, {"uid": "github/chiaraherzog/eutopsQC", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/eutopsQC", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/eutopsQC"}, {"uid": "github/chiaraherzog/WIDclocks", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/WIDclocks", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/WIDclocks"}, {"uid": "github/martinfleis/clustergram", "html_url": "https://rseng.github.io/software/repository/github/martinfleis/clustergram", "api_url": "https://rseng.github.io/software/api/repos/github/martinfleis/clustergram"}, {"uid": "github/jorittmo/singcar", "html_url": "https://rseng.github.io/software/repository/github/jorittmo/singcar", "api_url": "https://rseng.github.io/software/api/repos/github/jorittmo/singcar"}, {"uid": "github/Johannes-Sahlmann/pygacs", "html_url": "https://rseng.github.io/software/repository/github/Johannes-Sahlmann/pygacs", "api_url": "https://rseng.github.io/software/api/repos/github/Johannes-Sahlmann/pygacs"}, {"uid": "github/benmkent/SparseGridsKit.jl", "html_url": "https://rseng.github.io/software/repository/github/benmkent/SparseGridsKit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/benmkent/SparseGridsKit.jl"}, {"uid": "github/smillerc/CurvilinearGrids.jl", "html_url": "https://rseng.github.io/software/repository/github/smillerc/CurvilinearGrids.jl", "api_url": "https://rseng.github.io/software/api/repos/github/smillerc/CurvilinearGrids.jl"}, {"uid": "github/DLR-RM/BlenderProc", "html_url": "https://rseng.github.io/software/repository/github/DLR-RM/BlenderProc", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-RM/BlenderProc"}, {"uid": "github/lumen-org/lumen", "html_url": "https://rseng.github.io/software/repository/github/lumen-org/lumen", "api_url": "https://rseng.github.io/software/api/repos/github/lumen-org/lumen"}, {"uid": "github/mlinderm/npsv", "html_url": "https://rseng.github.io/software/repository/github/mlinderm/npsv", "api_url": "https://rseng.github.io/software/api/repos/github/mlinderm/npsv"}, {"uid": "github/c3s-magic/c3s-magic-wps", "html_url": "https://rseng.github.io/software/repository/github/c3s-magic/c3s-magic-wps", "api_url": "https://rseng.github.io/software/api/repos/github/c3s-magic/c3s-magic-wps"}, {"uid": "github/AprilYuge/ResPAN", "html_url": "https://rseng.github.io/software/repository/github/AprilYuge/ResPAN", "api_url": "https://rseng.github.io/software/api/repos/github/AprilYuge/ResPAN"}, {"uid": "github/ZhenjiangFan/DAG-deepVASE", "html_url": "https://rseng.github.io/software/repository/github/ZhenjiangFan/DAG-deepVASE", "api_url": "https://rseng.github.io/software/api/repos/github/ZhenjiangFan/DAG-deepVASE"}, {"uid": "github/radwinskis/RadGEEToolbox", "html_url": "https://rseng.github.io/software/repository/github/radwinskis/RadGEEToolbox", "api_url": "https://rseng.github.io/software/api/repos/github/radwinskis/RadGEEToolbox"}, {"uid": "github/damocles-code/damocles", "html_url": "https://rseng.github.io/software/repository/github/damocles-code/damocles", "api_url": "https://rseng.github.io/software/api/repos/github/damocles-code/damocles"}, {"uid": "github/ThomasBakx/cobra", "html_url": "https://rseng.github.io/software/repository/github/ThomasBakx/cobra", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasBakx/cobra"}, {"uid": "github/gigjozsa/tirific", "html_url": "https://rseng.github.io/software/repository/github/gigjozsa/tirific", "api_url": "https://rseng.github.io/software/api/repos/github/gigjozsa/tirific"}, {"uid": "github/dib-lab/TheGreatGenotyper", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/TheGreatGenotyper", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/TheGreatGenotyper"}, {"uid": "github/dib-lab/dammit", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/dammit", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/dammit"}, {"uid": "github/dib-lab/sourmash", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/sourmash"}, {"uid": "github/GunzIvan28/rMAP", "html_url": "https://rseng.github.io/software/repository/github/GunzIvan28/rMAP", "api_url": "https://rseng.github.io/software/api/repos/github/GunzIvan28/rMAP"}, {"uid": "github/dnarayanan/powderday", "html_url": "https://rseng.github.io/software/repository/github/dnarayanan/powderday", "api_url": "https://rseng.github.io/software/api/repos/github/dnarayanan/powderday"}, {"uid": "github/SSDataLab/vetting", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/vetting", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/vetting"}, {"uid": "github/SSDataLab/psfmachine", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/psfmachine", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/psfmachine"}, {"uid": "github/adrijd/beamconv", "html_url": "https://rseng.github.io/software/repository/github/adrijd/beamconv", "api_url": "https://rseng.github.io/software/api/repos/github/adrijd/beamconv"}, {"uid": "github/ci-for-science/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-science/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-science/self-hosted-runners"}, {"uid": "github/Kambrian/HBTplus", "html_url": "https://rseng.github.io/software/repository/github/Kambrian/HBTplus", "api_url": "https://rseng.github.io/software/api/repos/github/Kambrian/HBTplus"}, {"uid": "github/microbioinformatic/Co-PATHOgenex", "html_url": "https://rseng.github.io/software/repository/github/microbioinformatic/Co-PATHOgenex", "api_url": "https://rseng.github.io/software/api/repos/github/microbioinformatic/Co-PATHOgenex"}, {"uid": "github/AntoineDarveau/jwst", "html_url": "https://rseng.github.io/software/repository/github/AntoineDarveau/jwst", "api_url": "https://rseng.github.io/software/api/repos/github/AntoineDarveau/jwst"}, {"uid": "github/tomasplsek/CADET", "html_url": "https://rseng.github.io/software/repository/github/tomasplsek/CADET", "api_url": "https://rseng.github.io/software/api/repos/github/tomasplsek/CADET"}, {"uid": "github/nexml/nexml.java", "html_url": "https://rseng.github.io/software/repository/github/nexml/nexml.java", "api_url": "https://rseng.github.io/software/api/repos/github/nexml/nexml.java"}, {"uid": "github/lyf222/alpconv", "html_url": "https://rseng.github.io/software/repository/github/lyf222/alpconv", "api_url": "https://rseng.github.io/software/api/repos/github/lyf222/alpconv"}, {"uid": "github/Valdes-Tresanco-MS/NbThermo", "html_url": "https://rseng.github.io/software/repository/github/Valdes-Tresanco-MS/NbThermo", "api_url": "https://rseng.github.io/software/api/repos/github/Valdes-Tresanco-MS/NbThermo"}, {"uid": "github/mkplummer/Imber", "html_url": "https://rseng.github.io/software/repository/github/mkplummer/Imber", "api_url": "https://rseng.github.io/software/api/repos/github/mkplummer/Imber"}, {"uid": "github/dansarie/sboxgates", "html_url": "https://rseng.github.io/software/repository/github/dansarie/sboxgates", "api_url": "https://rseng.github.io/software/api/repos/github/dansarie/sboxgates"}, {"uid": "github/aboucaud/pypher", "html_url": "https://rseng.github.io/software/repository/github/aboucaud/pypher", "api_url": "https://rseng.github.io/software/api/repos/github/aboucaud/pypher"}, {"uid": "github/T0ngChen/medRCT", "html_url": "https://rseng.github.io/software/repository/github/T0ngChen/medRCT", "api_url": "https://rseng.github.io/software/api/repos/github/T0ngChen/medRCT"}, {"uid": "github/coljac/sensie", "html_url": "https://rseng.github.io/software/repository/github/coljac/sensie", "api_url": "https://rseng.github.io/software/api/repos/github/coljac/sensie"}, {"uid": "github/BigDataBiology/macrel", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/macrel", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/macrel"}, {"uid": "github/BigDataBiology/argNorm", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/argNorm", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/argNorm"}, {"uid": "github/sndik16/SFR_ChebyFit_example", "html_url": "https://rseng.github.io/software/repository/github/sndik16/SFR_ChebyFit_example", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/SFR_ChebyFit_example"}, {"uid": "github/sndik16/GAMA_quasarhosts_starformation", "html_url": "https://rseng.github.io/software/repository/github/sndik16/GAMA_quasarhosts_starformation", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/GAMA_quasarhosts_starformation"}, {"uid": "github/sndik16/light-GG", "html_url": "https://rseng.github.io/software/repository/github/sndik16/light-GG", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/light-GG"}, {"uid": "github/ageorgakakis/StructureFunction", "html_url": "https://rseng.github.io/software/repository/github/ageorgakakis/StructureFunction", "api_url": "https://rseng.github.io/software/api/repos/github/ageorgakakis/StructureFunction"}, {"uid": "github/rjsmethurst/snitch", "html_url": "https://rseng.github.io/software/repository/github/rjsmethurst/snitch", "api_url": "https://rseng.github.io/software/api/repos/github/rjsmethurst/snitch"}, {"uid": "github/smog-server/OpenSMOG", "html_url": "https://rseng.github.io/software/repository/github/smog-server/OpenSMOG", "api_url": "https://rseng.github.io/software/api/repos/github/smog-server/OpenSMOG"}, {"uid": "github/aakepley/autobox", "html_url": "https://rseng.github.io/software/repository/github/aakepley/autobox", "api_url": "https://rseng.github.io/software/api/repos/github/aakepley/autobox"}, {"uid": "github/emossoux/LIFELINE", "html_url": "https://rseng.github.io/software/repository/github/emossoux/LIFELINE", "api_url": "https://rseng.github.io/software/api/repos/github/emossoux/LIFELINE"}, {"uid": "github/GijsMulders/epos", "html_url": "https://rseng.github.io/software/repository/github/GijsMulders/epos", "api_url": "https://rseng.github.io/software/api/repos/github/GijsMulders/epos"}, {"uid": "github/vicruiser/3Dmapper", "html_url": "https://rseng.github.io/software/repository/github/vicruiser/3Dmapper", "api_url": "https://rseng.github.io/software/api/repos/github/vicruiser/3Dmapper"}, {"uid": "github/ruiying-ocean/cgeniepy", "html_url": "https://rseng.github.io/software/repository/github/ruiying-ocean/cgeniepy", "api_url": "https://rseng.github.io/software/api/repos/github/ruiying-ocean/cgeniepy"}, {"uid": "github/algo-cancer/CAMMiQ", "html_url": "https://rseng.github.io/software/repository/github/algo-cancer/CAMMiQ", "api_url": "https://rseng.github.io/software/api/repos/github/algo-cancer/CAMMiQ"}, {"uid": "github/NextGenCMB/lensitbiases", "html_url": "https://rseng.github.io/software/repository/github/NextGenCMB/lensitbiases", "api_url": "https://rseng.github.io/software/api/repos/github/NextGenCMB/lensitbiases"}, {"uid": "github/pelican/pelican", "html_url": "https://rseng.github.io/software/repository/github/pelican/pelican", "api_url": "https://rseng.github.io/software/api/repos/github/pelican/pelican"}, {"uid": "github/seap-udea/iWander", "html_url": "https://rseng.github.io/software/repository/github/seap-udea/iWander", "api_url": "https://rseng.github.io/software/api/repos/github/seap-udea/iWander"}, {"uid": "github/524D/compareMS2", "html_url": "https://rseng.github.io/software/repository/github/524D/compareMS2", "api_url": "https://rseng.github.io/software/api/repos/github/524D/compareMS2"}, {"uid": "github/JoschaJ/mockFRBhosts", "html_url": "https://rseng.github.io/software/repository/github/JoschaJ/mockFRBhosts", "api_url": "https://rseng.github.io/software/api/repos/github/JoschaJ/mockFRBhosts"}, {"uid": "github/GeodynamicWorldBuilder/WorldBuilder", "html_url": "https://rseng.github.io/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/GeodynamicWorldBuilder/WorldBuilder"}, {"uid": "github/BioinformaticsPlatformWIV-ISP/PACU", "html_url": "https://rseng.github.io/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", "api_url": "https://rseng.github.io/software/api/repos/github/BioinformaticsPlatformWIV-ISP/PACU"}, {"uid": "github/GOALS-survey/CAFE", "html_url": "https://rseng.github.io/software/repository/github/GOALS-survey/CAFE", "api_url": "https://rseng.github.io/software/api/repos/github/GOALS-survey/CAFE"}, {"uid": "github/apaolillo/pythainer", "html_url": "https://rseng.github.io/software/repository/github/apaolillo/pythainer", "api_url": "https://rseng.github.io/software/api/repos/github/apaolillo/pythainer"}, {"uid": "github/jaimedelacruz/stic", "html_url": "https://rseng.github.io/software/repository/github/jaimedelacruz/stic", "api_url": "https://rseng.github.io/software/api/repos/github/jaimedelacruz/stic"}, {"uid": "github/openmsi/openmsistream", "html_url": "https://rseng.github.io/software/repository/github/openmsi/openmsistream", "api_url": "https://rseng.github.io/software/api/repos/github/openmsi/openmsistream"}, {"uid": "github/rauschenberger/joinet", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/joinet", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/joinet"}, {"uid": "github/rauschenberger/transreg", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/transreg", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/transreg"}, {"uid": "github/ranieremenezes/easyFermi", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyFermi", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyFermi"}, {"uid": "github/ranieremenezes/easyspec", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyspec", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyspec"}, {"uid": "github/USEPA/nsink", "html_url": "https://rseng.github.io/software/repository/github/USEPA/nsink", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/nsink"}, {"uid": "github/USEPA/harmonize-wq", "html_url": "https://rseng.github.io/software/repository/github/USEPA/harmonize-wq", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/harmonize-wq"}, {"uid": "github/USEPA/peat", "html_url": "https://rseng.github.io/software/repository/github/USEPA/peat", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/peat"}, {"uid": "github/USEPA/MCSimMod", "html_url": "https://rseng.github.io/software/repository/github/USEPA/MCSimMod", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/MCSimMod"}, {"uid": "github/USEPA/SSN2", "html_url": "https://rseng.github.io/software/repository/github/USEPA/SSN2", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/SSN2"}, {"uid": "github/tolkit/telomeric-identifier", "html_url": "https://rseng.github.io/software/repository/github/tolkit/telomeric-identifier", "api_url": "https://rseng.github.io/software/api/repos/github/tolkit/telomeric-identifier"}, {"uid": "github/ElucidataInc/ElMaven", "html_url": "https://rseng.github.io/software/repository/github/ElucidataInc/ElMaven", "api_url": "https://rseng.github.io/software/api/repos/github/ElucidataInc/ElMaven"}, {"uid": "github/algolab/shark", "html_url": "https://rseng.github.io/software/repository/github/algolab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/algolab/shark"}, {"uid": "github/BioHPC/MegaD", "html_url": "https://rseng.github.io/software/repository/github/BioHPC/MegaD", "api_url": "https://rseng.github.io/software/api/repos/github/BioHPC/MegaD"}, {"uid": "github/mslonina/Mechanic", "html_url": "https://rseng.github.io/software/repository/github/mslonina/Mechanic", "api_url": "https://rseng.github.io/software/api/repos/github/mslonina/Mechanic"}, {"uid": "github/idptools/metapredict", "html_url": "https://rseng.github.io/software/repository/github/idptools/metapredict", "api_url": "https://rseng.github.io/software/api/repos/github/idptools/metapredict"}, {"uid": "github/szymon-datalions/pyinterpolate", "html_url": "https://rseng.github.io/software/repository/github/szymon-datalions/pyinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/szymon-datalions/pyinterpolate"}, {"uid": "github/mlafarga/raccoon", "html_url": "https://rseng.github.io/software/repository/github/mlafarga/raccoon", "api_url": "https://rseng.github.io/software/api/repos/github/mlafarga/raccoon"}, {"uid": "github/NicolasHug/Surprise", "html_url": "https://rseng.github.io/software/repository/github/NicolasHug/Surprise", "api_url": "https://rseng.github.io/software/api/repos/github/NicolasHug/Surprise"}, {"uid": "github/odlomax/spamcart-dev", "html_url": "https://rseng.github.io/software/repository/github/odlomax/spamcart-dev", "api_url": "https://rseng.github.io/software/api/repos/github/odlomax/spamcart-dev"}, {"uid": "github/SolavLab/DuoDIC", "html_url": "https://rseng.github.io/software/repository/github/SolavLab/DuoDIC", "api_url": "https://rseng.github.io/software/api/repos/github/SolavLab/DuoDIC"}, {"uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", "html_url": "https://rseng.github.io/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", "api_url": "https://rseng.github.io/software/api/repos/github/Julian-Sommer/chen-dai-2025-lightcurve-model"}, {"uid": "github/mphowardlab/lammpsio", "html_url": "https://rseng.github.io/software/repository/github/mphowardlab/lammpsio", "api_url": "https://rseng.github.io/software/api/repos/github/mphowardlab/lammpsio"}, {"uid": "github/SMTG-UCL/surfaxe", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/surfaxe", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/surfaxe"}, {"uid": "github/SMTG-UCL/ShakeNBreak", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/ShakeNBreak", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/ShakeNBreak"}, {"uid": "github/NikolayOskolkov/MCWorkflow", "html_url": "https://rseng.github.io/software/repository/github/NikolayOskolkov/MCWorkflow", "api_url": "https://rseng.github.io/software/api/repos/github/NikolayOskolkov/MCWorkflow"}, {"uid": "github/tinawunderlich/MultichannelGPR", "html_url": "https://rseng.github.io/software/repository/github/tinawunderlich/MultichannelGPR", "api_url": "https://rseng.github.io/software/api/repos/github/tinawunderlich/MultichannelGPR"}, {"uid": "github/smoh/kinesis", "html_url": "https://rseng.github.io/software/repository/github/smoh/kinesis", "api_url": "https://rseng.github.io/software/api/repos/github/smoh/kinesis"}, {"uid": "github/SchlossLab/mikropml", "html_url": "https://rseng.github.io/software/repository/github/SchlossLab/mikropml", "api_url": "https://rseng.github.io/software/api/repos/github/SchlossLab/mikropml"}, {"uid": "github/numpy/numpy", "html_url": "https://rseng.github.io/software/repository/github/numpy/numpy", "api_url": "https://rseng.github.io/software/api/repos/github/numpy/numpy"}, {"uid": "github/nedtaylor/athena", "html_url": "https://rseng.github.io/software/repository/github/nedtaylor/athena", "api_url": "https://rseng.github.io/software/api/repos/github/nedtaylor/athena"}, {"uid": "github/sumn2u/annotate-lab", "html_url": "https://rseng.github.io/software/repository/github/sumn2u/annotate-lab", "api_url": "https://rseng.github.io/software/api/repos/github/sumn2u/annotate-lab"}, {"uid": "github/shilpagarg/WHdenovo", "html_url": "https://rseng.github.io/software/repository/github/shilpagarg/WHdenovo", "api_url": "https://rseng.github.io/software/api/repos/github/shilpagarg/WHdenovo"}, {"uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", "html_url": "https://rseng.github.io/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", "api_url": "https://rseng.github.io/software/api/repos/github/VIRAC-SPACE/Automatic_Correlation_information_system"}, {"uid": "github/elsoroka/Satisfiability.jl", "html_url": "https://rseng.github.io/software/repository/github/elsoroka/Satisfiability.jl", "api_url": "https://rseng.github.io/software/api/repos/github/elsoroka/Satisfiability.jl"}, {"uid": "github/alphapsa/PIPE", "html_url": "https://rseng.github.io/software/repository/github/alphapsa/PIPE", "api_url": "https://rseng.github.io/software/api/repos/github/alphapsa/PIPE"}, {"uid": "github/goshng/polap", "html_url": "https://rseng.github.io/software/repository/github/goshng/polap", "api_url": "https://rseng.github.io/software/api/repos/github/goshng/polap"}, {"uid": "github/txopen/histoc", "html_url": "https://rseng.github.io/software/repository/github/txopen/histoc", "api_url": "https://rseng.github.io/software/api/repos/github/txopen/histoc"}, {"uid": "github/HajimeKawahara/exojax", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/exojax", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/exojax"}, {"uid": "github/HajimeKawahara/juwvid", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/juwvid", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/juwvid"}, {"uid": "github/HajimeKawahara/sot", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/sot", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/sot"}, {"uid": "github/morphometry/papaya2", "html_url": "https://rseng.github.io/software/repository/github/morphometry/papaya2", "api_url": "https://rseng.github.io/software/api/repos/github/morphometry/papaya2"}, {"uid": "github/xcompact3d/Incompact3d", "html_url": "https://rseng.github.io/software/repository/github/xcompact3d/Incompact3d", "api_url": "https://rseng.github.io/software/api/repos/github/xcompact3d/Incompact3d"}, {"uid": "github/valentineap/pyprop8", "html_url": "https://rseng.github.io/software/repository/github/valentineap/pyprop8", "api_url": "https://rseng.github.io/software/api/repos/github/valentineap/pyprop8"}, {"uid": "github/argiopetech/base", "html_url": "https://rseng.github.io/software/repository/github/argiopetech/base", "api_url": "https://rseng.github.io/software/api/repos/github/argiopetech/base"}, {"uid": "github/tao-bioinfo/MiFish", "html_url": "https://rseng.github.io/software/repository/github/tao-bioinfo/MiFish", "api_url": "https://rseng.github.io/software/api/repos/github/tao-bioinfo/MiFish"}, {"uid": "github/trevorgokey/besmarts", "html_url": "https://rseng.github.io/software/repository/github/trevorgokey/besmarts", "api_url": "https://rseng.github.io/software/api/repos/github/trevorgokey/besmarts"}, {"uid": "github/HinodeXRT/xrtpy", "html_url": "https://rseng.github.io/software/repository/github/HinodeXRT/xrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/HinodeXRT/xrtpy"}, {"uid": "github/KVSlab/turtleFSI", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/turtleFSI", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/turtleFSI"}, {"uid": "github/KVSlab/VaMPy", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/VaMPy", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/VaMPy"}, {"uid": "github/insightsengineering/rbmi", "html_url": "https://rseng.github.io/software/repository/github/insightsengineering/rbmi", "api_url": "https://rseng.github.io/software/api/repos/github/insightsengineering/rbmi"}, {"uid": "github/rivasiker/PhaseTypeR", "html_url": "https://rseng.github.io/software/repository/github/rivasiker/PhaseTypeR", "api_url": "https://rseng.github.io/software/api/repos/github/rivasiker/PhaseTypeR"}, {"uid": "github/bolverk/huji-rich", "html_url": "https://rseng.github.io/software/repository/github/bolverk/huji-rich", "api_url": "https://rseng.github.io/software/api/repos/github/bolverk/huji-rich"}, {"uid": "github/pandegroup/openmm", "html_url": "https://rseng.github.io/software/repository/github/pandegroup/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/pandegroup/openmm"}, {"uid": "github/dr-joe-wirth/primerForge", "html_url": "https://rseng.github.io/software/repository/github/dr-joe-wirth/primerForge", "api_url": "https://rseng.github.io/software/api/repos/github/dr-joe-wirth/primerForge"}, {"uid": "github/wcoulton/CompressedFisher", "html_url": "https://rseng.github.io/software/repository/github/wcoulton/CompressedFisher", "api_url": "https://rseng.github.io/software/api/repos/github/wcoulton/CompressedFisher"}, {"uid": "github/smith-chem-wisc/MetaMorpheus", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/MetaMorpheus", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/MetaMorpheus"}, {"uid": "github/smith-chem-wisc/ProteaseGuru", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/ProteaseGuru", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/ProteaseGuru"}, {"uid": "github/RECeSS-EU-Project/stanscofi", "html_url": "https://rseng.github.io/software/repository/github/RECeSS-EU-Project/stanscofi", "api_url": "https://rseng.github.io/software/api/repos/github/RECeSS-EU-Project/stanscofi"}, {"uid": "github/TimothyADavis/GAStimator", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/GAStimator", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/GAStimator"}, {"uid": "github/TimothyADavis/KinMSpy", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/KinMSpy", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/KinMSpy"}, {"uid": "github/biofold/ddgun", "html_url": "https://rseng.github.io/software/repository/github/biofold/ddgun", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/ddgun"}, {"uid": "github/biofold/PhD-SNPg", "html_url": "https://rseng.github.io/software/repository/github/biofold/PhD-SNPg", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/PhD-SNPg"}, {"uid": "github/jordanflitter/21cmFirstCLASS", "html_url": "https://rseng.github.io/software/repository/github/jordanflitter/21cmFirstCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/jordanflitter/21cmFirstCLASS"}, {"uid": "github/nicokurtovic/SIMIO", "html_url": "https://rseng.github.io/software/repository/github/nicokurtovic/SIMIO", "api_url": "https://rseng.github.io/software/api/repos/github/nicokurtovic/SIMIO"}, {"uid": "github/pasteurlabs/tesseract-core", "html_url": "https://rseng.github.io/software/repository/github/pasteurlabs/tesseract-core", "api_url": "https://rseng.github.io/software/api/repos/github/pasteurlabs/tesseract-core"}, {"uid": "github/phineasng/DECODE", "html_url": "https://rseng.github.io/software/repository/github/phineasng/DECODE", "api_url": "https://rseng.github.io/software/api/repos/github/phineasng/DECODE"}, {"uid": "github/thetisproject/thetis", "html_url": "https://rseng.github.io/software/repository/github/thetisproject/thetis", "api_url": "https://rseng.github.io/software/api/repos/github/thetisproject/thetis"}, {"uid": "github/nvanalfen/halotools", "html_url": "https://rseng.github.io/software/repository/github/nvanalfen/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/nvanalfen/halotools"}, {"uid": "github/YaoGroup/DIFFICE_jax", "html_url": "https://rseng.github.io/software/repository/github/YaoGroup/DIFFICE_jax", "api_url": "https://rseng.github.io/software/api/repos/github/YaoGroup/DIFFICE_jax"}, {"uid": "github/adamgayoso/totalVI_reproducibility", "html_url": "https://rseng.github.io/software/repository/github/adamgayoso/totalVI_reproducibility", "api_url": "https://rseng.github.io/software/api/repos/github/adamgayoso/totalVI_reproducibility"}, {"uid": "github/locasto/libdisorder", "html_url": "https://rseng.github.io/software/repository/github/locasto/libdisorder", "api_url": "https://rseng.github.io/software/api/repos/github/locasto/libdisorder"}, {"uid": "github/adithirgis/pollucheck", "html_url": "https://rseng.github.io/software/repository/github/adithirgis/pollucheck", "api_url": "https://rseng.github.io/software/api/repos/github/adithirgis/pollucheck"}, {"uid": "github/jhayer/baargin", "html_url": "https://rseng.github.io/software/repository/github/jhayer/baargin", "api_url": "https://rseng.github.io/software/api/repos/github/jhayer/baargin"}, {"uid": "github/cullanhowlett/l-picola", "html_url": "https://rseng.github.io/software/repository/github/cullanhowlett/l-picola", "api_url": "https://rseng.github.io/software/api/repos/github/cullanhowlett/l-picola"}, {"uid": "github/bids-apps/giga_connectome", "html_url": "https://rseng.github.io/software/repository/github/bids-apps/giga_connectome", "api_url": "https://rseng.github.io/software/api/repos/github/bids-apps/giga_connectome"}, {"uid": "github/Trovemaster/Duo", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/Duo", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/Duo"}, {"uid": "github/Trovemaster/exocross", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/exocross", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/exocross"}, {"uid": "github/Trovemaster/TROVE", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/TROVE", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/TROVE"}, {"uid": "github/rorybarnes/EqTide", "html_url": "https://rseng.github.io/software/repository/github/rorybarnes/EqTide", "api_url": "https://rseng.github.io/software/api/repos/github/rorybarnes/EqTide"}, {"uid": "github/trygvrad/DF-XRM_viz", "html_url": "https://rseng.github.io/software/repository/github/trygvrad/DF-XRM_viz", "api_url": "https://rseng.github.io/software/api/repos/github/trygvrad/DF-XRM_viz"}, {"uid": "github/CastillonMiguel/phasefieldx", "html_url": "https://rseng.github.io/software/repository/github/CastillonMiguel/phasefieldx", "api_url": "https://rseng.github.io/software/api/repos/github/CastillonMiguel/phasefieldx"}, {"uid": "github/VarStarDetect/varstardetect", "html_url": "https://rseng.github.io/software/repository/github/VarStarDetect/varstardetect", "api_url": "https://rseng.github.io/software/api/repos/github/VarStarDetect/varstardetect"}, {"uid": "github/jdeast/EXOFASTv2", "html_url": "https://rseng.github.io/software/repository/github/jdeast/EXOFASTv2", "api_url": "https://rseng.github.io/software/api/repos/github/jdeast/EXOFASTv2"}, {"uid": "github/TrackerControl/tracker-control-android", "html_url": "https://rseng.github.io/software/repository/github/TrackerControl/tracker-control-android", "api_url": "https://rseng.github.io/software/api/repos/github/TrackerControl/tracker-control-android"}, {"uid": "github/linbox-team/linbox", "html_url": "https://rseng.github.io/software/repository/github/linbox-team/linbox", "api_url": "https://rseng.github.io/software/api/repos/github/linbox-team/linbox"}, {"uid": "github/carlosandrepaes/GaPP", "html_url": "https://rseng.github.io/software/repository/github/carlosandrepaes/GaPP", "api_url": "https://rseng.github.io/software/api/repos/github/carlosandrepaes/GaPP"}, {"uid": "github/krab1k/ChargeFW2", "html_url": "https://rseng.github.io/software/repository/github/krab1k/ChargeFW2", "api_url": "https://rseng.github.io/software/api/repos/github/krab1k/ChargeFW2"}, {"uid": "github/mayuresh159/starsense_algorithms", "html_url": "https://rseng.github.io/software/repository/github/mayuresh159/starsense_algorithms", "api_url": "https://rseng.github.io/software/api/repos/github/mayuresh159/starsense_algorithms"}, {"uid": "github/erhard-lab/gedi", "html_url": "https://rseng.github.io/software/repository/github/erhard-lab/gedi", "api_url": "https://rseng.github.io/software/api/repos/github/erhard-lab/gedi"}, {"uid": "github/DedalusProject/eigentools", "html_url": "https://rseng.github.io/software/repository/github/DedalusProject/eigentools", "api_url": "https://rseng.github.io/software/api/repos/github/DedalusProject/eigentools"}, {"uid": "github/swagnercarena/ovejero", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/ovejero", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/ovejero"}, {"uid": "github/swagnercarena/paltas", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/paltas", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/paltas"}, {"uid": "github/bio-tools/biotoolsSum", "html_url": "https://rseng.github.io/software/repository/github/bio-tools/biotoolsSum", "api_url": "https://rseng.github.io/software/api/repos/github/bio-tools/biotoolsSum"}, {"uid": "github/pydemull/activAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/pydemull/activAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/pydemull/activAnalyzer"}, {"uid": "github/MLMI2-CSSI/foundry", "html_url": "https://rseng.github.io/software/repository/github/MLMI2-CSSI/foundry", "api_url": "https://rseng.github.io/software/api/repos/github/MLMI2-CSSI/foundry"}, {"uid": "github/qiime2/q2-vsearch", "html_url": "https://rseng.github.io/software/repository/github/qiime2/q2-vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/qiime2/q2-vsearch"}, {"uid": "github/exoclim/aeolus", "html_url": "https://rseng.github.io/software/repository/github/exoclim/aeolus", "api_url": "https://rseng.github.io/software/api/repos/github/exoclim/aeolus"}, {"uid": "github/julia-wrobel/registr", "html_url": "https://rseng.github.io/software/repository/github/julia-wrobel/registr", "api_url": "https://rseng.github.io/software/api/repos/github/julia-wrobel/registr"}, {"uid": "github/astroferreira/galclean", "html_url": "https://rseng.github.io/software/repository/github/astroferreira/galclean", "api_url": "https://rseng.github.io/software/api/repos/github/astroferreira/galclean"}, {"uid": "github/haotianteng/BoostNano", "html_url": "https://rseng.github.io/software/repository/github/haotianteng/BoostNano", "api_url": "https://rseng.github.io/software/api/repos/github/haotianteng/BoostNano"}, {"uid": "github/flekschas/jupyter-scatter", "html_url": "https://rseng.github.io/software/repository/github/flekschas/jupyter-scatter", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/jupyter-scatter"}, {"uid": "github/flekschas/regl-scatterplot", "html_url": "https://rseng.github.io/software/repository/github/flekschas/regl-scatterplot", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/regl-scatterplot"}, {"uid": "github/Sarc-Graph/sarcgraph", "html_url": "https://rseng.github.io/software/repository/github/Sarc-Graph/sarcgraph", "api_url": "https://rseng.github.io/software/api/repos/github/Sarc-Graph/sarcgraph"}, {"uid": "github/mmelwani/AccretR", "html_url": "https://rseng.github.io/software/repository/github/mmelwani/AccretR", "api_url": "https://rseng.github.io/software/api/repos/github/mmelwani/AccretR"}, {"uid": "github/LabTranslationalArchitectomics/riboWaltz", "html_url": "https://rseng.github.io/software/repository/github/LabTranslationalArchitectomics/riboWaltz", "api_url": "https://rseng.github.io/software/api/repos/github/LabTranslationalArchitectomics/riboWaltz"}, {"uid": "github/almost6heads/ConleyDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/almost6heads/ConleyDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/almost6heads/ConleyDynamics.jl"}, {"uid": "github/JacksonBurns/astartes", "html_url": "https://rseng.github.io/software/repository/github/JacksonBurns/astartes", "api_url": "https://rseng.github.io/software/api/repos/github/JacksonBurns/astartes"}, {"uid": "github/LandSciTech/ccviR", "html_url": "https://rseng.github.io/software/repository/github/LandSciTech/ccviR", "api_url": "https://rseng.github.io/software/api/repos/github/LandSciTech/ccviR"}, {"uid": "github/blind-contours/CVtreeMLE", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/CVtreeMLE", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/CVtreeMLE"}, {"uid": "github/blind-contours/SuperNOVA", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/SuperNOVA", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/SuperNOVA"}, {"uid": "github/abrupt-climate/hyper-canny", "html_url": "https://rseng.github.io/software/repository/github/abrupt-climate/hyper-canny", "api_url": "https://rseng.github.io/software/api/repos/github/abrupt-climate/hyper-canny"}, {"uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "html_url": "https://rseng.github.io/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "api_url": "https://rseng.github.io/software/api/repos/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever"}, {"uid": "github/matplotlib/matplotlib", "html_url": "https://rseng.github.io/software/repository/github/matplotlib/matplotlib", "api_url": "https://rseng.github.io/software/api/repos/github/matplotlib/matplotlib"}, {"uid": "github/Someone789/galax2d", "html_url": "https://rseng.github.io/software/repository/github/Someone789/galax2d", "api_url": "https://rseng.github.io/software/api/repos/github/Someone789/galax2d"}, {"uid": "github/florian-lienhard/MM-LSD", "html_url": "https://rseng.github.io/software/repository/github/florian-lienhard/MM-LSD", "api_url": "https://rseng.github.io/software/api/repos/github/florian-lienhard/MM-LSD"}, {"uid": "github/Professor-G/MicroLIA", "html_url": "https://rseng.github.io/software/repository/github/Professor-G/MicroLIA", "api_url": "https://rseng.github.io/software/api/repos/github/Professor-G/MicroLIA"}, {"uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/PyMOL-KVFinder-web-Tools"}, {"uid": "github/LBC-LNBio/pyKVFinder", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/pyKVFinder", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/pyKVFinder"}, {"uid": "github/LBC-LNBio/parKVFinder-win", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/parKVFinder-win", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/parKVFinder-win"}, {"uid": "github/nhejazi/medoutcon", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/medoutcon", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/medoutcon"}, {"uid": "github/nhejazi/txshift", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/txshift", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/txshift"}, {"uid": "github/nhejazi/haldensify", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/haldensify", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/haldensify"}, {"uid": "github/aneeshnaik/spam", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/spam", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/spam"}, {"uid": "github/aneeshnaik/lintsampler", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/lintsampler", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/lintsampler"}, {"uid": "github/djsutherland/py-sdm", "html_url": "https://rseng.github.io/software/repository/github/djsutherland/py-sdm", "api_url": "https://rseng.github.io/software/api/repos/github/djsutherland/py-sdm"}, {"uid": "github/astroumd/miriad", "html_url": "https://rseng.github.io/software/repository/github/astroumd/miriad", "api_url": "https://rseng.github.io/software/api/repos/github/astroumd/miriad"}, {"uid": "github/JFFleming/RCFV_Reader", "html_url": "https://rseng.github.io/software/repository/github/JFFleming/RCFV_Reader", "api_url": "https://rseng.github.io/software/api/repos/github/JFFleming/RCFV_Reader"}, {"uid": "github/brentp/gsort", "html_url": "https://rseng.github.io/software/repository/github/brentp/gsort", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/gsort"}, {"uid": "github/brentp/peddy", "html_url": "https://rseng.github.io/software/repository/github/brentp/peddy", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/peddy"}, {"uid": "github/brentp/vcfanno", "html_url": "https://rseng.github.io/software/repository/github/brentp/vcfanno", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/vcfanno"}, {"uid": "github/brentp/geneimpacts", "html_url": "https://rseng.github.io/software/repository/github/brentp/geneimpacts", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/geneimpacts"}, {"uid": "github/brentp/cyvcf2", "html_url": "https://rseng.github.io/software/repository/github/brentp/cyvcf2", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cyvcf2"}, {"uid": "github/brentp/cigar", "html_url": "https://rseng.github.io/software/repository/github/brentp/cigar", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cigar"}, {"uid": "github/brentp/somalier", "html_url": "https://rseng.github.io/software/repository/github/brentp/somalier", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/somalier"}, {"uid": "github/brentp/mosdepth", "html_url": "https://rseng.github.io/software/repository/github/brentp/mosdepth", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/mosdepth"}, {"uid": "github/brentp/hts-nim-tools", "html_url": "https://rseng.github.io/software/repository/github/brentp/hts-nim-tools", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/hts-nim-tools"}, {"uid": "github/brentp/kexpr-nim", "html_url": "https://rseng.github.io/software/repository/github/brentp/kexpr-nim", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/kexpr-nim"}, {"uid": "github/brentp/goleft", "html_url": "https://rseng.github.io/software/repository/github/brentp/goleft", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/goleft"}, {"uid": "github/brentp/smoove", "html_url": "https://rseng.github.io/software/repository/github/brentp/smoove", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/smoove"}, {"uid": "github/brentp/nim-lapper", "html_url": "https://rseng.github.io/software/repository/github/brentp/nim-lapper", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/nim-lapper"}, {"uid": "github/mdolab/pygeo", "html_url": "https://rseng.github.io/software/repository/github/mdolab/pygeo", "api_url": "https://rseng.github.io/software/api/repos/github/mdolab/pygeo"}, {"uid": "github/tibordome/cosmic_profiles", "html_url": "https://rseng.github.io/software/repository/github/tibordome/cosmic_profiles", "api_url": "https://rseng.github.io/software/api/repos/github/tibordome/cosmic_profiles"}, {"uid": "github/reneshbedre/bioinfokit", "html_url": "https://rseng.github.io/software/repository/github/reneshbedre/bioinfokit", "api_url": "https://rseng.github.io/software/api/repos/github/reneshbedre/bioinfokit"}, {"uid": "github/jbussemaker/SBArchOpt", "html_url": "https://rseng.github.io/software/repository/github/jbussemaker/SBArchOpt", "api_url": "https://rseng.github.io/software/api/repos/github/jbussemaker/SBArchOpt"}, {"uid": "github/PolymathicAI/AstroCLIP", "html_url": "https://rseng.github.io/software/repository/github/PolymathicAI/AstroCLIP", "api_url": "https://rseng.github.io/software/api/repos/github/PolymathicAI/AstroCLIP"}, {"uid": "github/HengyueZ/astrofix", "html_url": "https://rseng.github.io/software/repository/github/HengyueZ/astrofix", "api_url": "https://rseng.github.io/software/api/repos/github/HengyueZ/astrofix"}, {"uid": "github/qiangyicheng/flory", "html_url": "https://rseng.github.io/software/repository/github/qiangyicheng/flory", "api_url": "https://rseng.github.io/software/api/repos/github/qiangyicheng/flory"}, {"uid": "github/NathanSkene/EWCE", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/EWCE", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/EWCE"}, {"uid": "github/NathanSkene/MAGMA_Celltyping", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/MAGMA_Celltyping", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/MAGMA_Celltyping"}, {"uid": "github/jodyphelan/TBProfiler", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/TBProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/TBProfiler"}, {"uid": "github/jodyphelan/tb-ml", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/tb-ml", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/tb-ml"}, {"uid": "github/PNNL-m-q/mza", "html_url": "https://rseng.github.io/software/repository/github/PNNL-m-q/mza", "api_url": "https://rseng.github.io/software/api/repos/github/PNNL-m-q/mza"}, {"uid": "github/dsheward-astro/pynaple", "html_url": "https://rseng.github.io/software/repository/github/dsheward-astro/pynaple", "api_url": "https://rseng.github.io/software/api/repos/github/dsheward-astro/pynaple"}, {"uid": "github/fkiwy/Finder_charts", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/Finder_charts", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/Finder_charts"}, {"uid": "github/fkiwy/unTimely_Catalog_explorer", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/unTimely_Catalog_explorer", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/unTimely_Catalog_explorer"}, {"uid": "github/fkiwy/AstroToolBox", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/AstroToolBox", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/AstroToolBox"}, {"uid": "github/ExoplanetML/Nigraha", "html_url": "https://rseng.github.io/software/repository/github/ExoplanetML/Nigraha", "api_url": "https://rseng.github.io/software/api/repos/github/ExoplanetML/Nigraha"}, {"uid": "github/ConesaLab/MOSim", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MOSim", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MOSim"}, {"uid": "github/ConesaLab/MultiPower", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MultiPower", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MultiPower"}, {"uid": "github/ConesaLab/SQANTI3", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/SQANTI3", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/SQANTI3"}, {"uid": "github/GilbertLabUCSF/CanDI", "html_url": "https://rseng.github.io/software/repository/github/GilbertLabUCSF/CanDI", "api_url": "https://rseng.github.io/software/api/repos/github/GilbertLabUCSF/CanDI"}, {"uid": "github/alan-turing-institute/autoemulate", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/autoemulate", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/autoemulate"}, {"uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/monitoring-ecosystem-resilience"}, {"uid": "github/alan-turing-institute/DetectorChecker", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/DetectorChecker", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/DetectorChecker"}, {"uid": "github/alan-turing-institute/MLJ.jl", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/MLJ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/MLJ.jl"}, {"uid": "github/alan-turing-institute/Palaeoanalytics", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/Palaeoanalytics", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/Palaeoanalytics"}, {"uid": "github/alan-turing-institute/setvis", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/setvis", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/setvis"}, {"uid": "github/iquasere/UPIMAPI", "html_url": "https://rseng.github.io/software/repository/github/iquasere/UPIMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/iquasere/UPIMAPI"}, {"uid": "github/MillionConcepts/lhorizon", "html_url": "https://rseng.github.io/software/repository/github/MillionConcepts/lhorizon", "api_url": "https://rseng.github.io/software/api/repos/github/MillionConcepts/lhorizon"}, {"uid": "github/skypyproject/skypy", "html_url": "https://rseng.github.io/software/repository/github/skypyproject/skypy", "api_url": "https://rseng.github.io/software/api/repos/github/skypyproject/skypy"}, {"uid": "github/tommyau/bamclipper", "html_url": "https://rseng.github.io/software/repository/github/tommyau/bamclipper", "api_url": "https://rseng.github.io/software/api/repos/github/tommyau/bamclipper"}, {"uid": "github/CDCgov/BART-Survival", "html_url": "https://rseng.github.io/software/repository/github/CDCgov/BART-Survival", "api_url": "https://rseng.github.io/software/api/repos/github/CDCgov/BART-Survival"}, {"uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", "html_url": "https://rseng.github.io/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasEdwardRiley/xpsi-pre-transfer"}, {"uid": "github/wchenastro/Mosaic", "html_url": "https://rseng.github.io/software/repository/github/wchenastro/Mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/wchenastro/Mosaic"}, {"uid": "github/ELeeAstro/gCMCRT", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/gCMCRT", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/gCMCRT"}, {"uid": "github/ELeeAstro/mini_chem", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/mini_chem", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/mini_chem"}, {"uid": "github/Punzo/SlicerAstro", "html_url": "https://rseng.github.io/software/repository/github/Punzo/SlicerAstro", "api_url": "https://rseng.github.io/software/api/repos/github/Punzo/SlicerAstro"}, {"uid": "github/cistrome/MIRA", "html_url": "https://rseng.github.io/software/repository/github/cistrome/MIRA", "api_url": "https://rseng.github.io/software/api/repos/github/cistrome/MIRA"}, {"uid": "github/johnh2o2/cuvarbase", "html_url": "https://rseng.github.io/software/repository/github/johnh2o2/cuvarbase", "api_url": "https://rseng.github.io/software/api/repos/github/johnh2o2/cuvarbase"}, {"uid": "github/meinardmueller/synctoolbox", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/synctoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/synctoolbox"}, {"uid": "github/meinardmueller/libfmp", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/libfmp", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/libfmp"}, {"uid": "github/euclidlib/euclidlib", "html_url": "https://rseng.github.io/software/repository/github/euclidlib/euclidlib", "api_url": "https://rseng.github.io/software/api/repos/github/euclidlib/euclidlib"}, {"uid": "github/pierrehoudayer/RUBIS", "html_url": "https://rseng.github.io/software/repository/github/pierrehoudayer/RUBIS", "api_url": "https://rseng.github.io/software/api/repos/github/pierrehoudayer/RUBIS"}, {"uid": "github/zhanghe9704/tpsa_sym", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa_sym", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa_sym"}, {"uid": "github/zhanghe9704/tpsa", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa"}, {"uid": "github/nservant/HiC-Pro", "html_url": "https://rseng.github.io/software/repository/github/nservant/HiC-Pro", "api_url": "https://rseng.github.io/software/api/repos/github/nservant/HiC-Pro"}, {"uid": "github/bommert/stabm", "html_url": "https://rseng.github.io/software/repository/github/bommert/stabm", "api_url": "https://rseng.github.io/software/api/repos/github/bommert/stabm"}, {"uid": "github/lpantano/seqbuster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqbuster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqbuster"}, {"uid": "github/lpantano/seqcluster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqcluster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqcluster"}, {"uid": "github/jackmwolf/tehtuner", "html_url": "https://rseng.github.io/software/repository/github/jackmwolf/tehtuner", "api_url": "https://rseng.github.io/software/api/repos/github/jackmwolf/tehtuner"}, {"uid": "github/soedinglab/plass", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/plass", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/plass"}, {"uid": "github/soedinglab/metaeuk", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/metaeuk", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/metaeuk"}, {"uid": "github/soedinglab/mmseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/mmseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/mmseqs2"}, {"uid": "github/soedinglab/spacepharer", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/spacepharer", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/spacepharer"}, {"uid": "github/soedinglab/hh-suite", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/hh-suite", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/hh-suite"}, {"uid": "github/soedinglab/MMseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/MMseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/MMseqs2"}, {"uid": "github/nasa/KeplerPORTs", "html_url": "https://rseng.github.io/software/repository/github/nasa/KeplerPORTs", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/KeplerPORTs"}, {"uid": "github/nasa/Kamodo", "html_url": "https://rseng.github.io/software/repository/github/nasa/Kamodo", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/Kamodo"}, {"uid": "github/nasa/simupy-flight", "html_url": "https://rseng.github.io/software/repository/github/nasa/simupy-flight", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/simupy-flight"}, {"uid": "github/nasa/kepler-robovetter", "html_url": "https://rseng.github.io/software/repository/github/nasa/kepler-robovetter", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/kepler-robovetter"}, {"uid": "github/nasa/prog_models", "html_url": "https://rseng.github.io/software/repository/github/nasa/prog_models", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/prog_models"}, {"uid": "github/nasa/ncompare", "html_url": "https://rseng.github.io/software/repository/github/nasa/ncompare", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/ncompare"}, {"uid": "github/nasa/exoscene", "html_url": "https://rseng.github.io/software/repository/github/nasa/exoscene", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/exoscene"}, {"uid": "github/nasa/K2CE", "html_url": "https://rseng.github.io/software/repository/github/nasa/K2CE", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/K2CE"}, {"uid": "github/cwentland0/perform", "html_url": "https://rseng.github.io/software/repository/github/cwentland0/perform", "api_url": "https://rseng.github.io/software/api/repos/github/cwentland0/perform"}, {"uid": "github/thomasorb/orcs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orcs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orcs"}, {"uid": "github/thomasorb/orbs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orbs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orbs"}, {"uid": "github/aberer/RogueNaRok", "html_url": "https://rseng.github.io/software/repository/github/aberer/RogueNaRok", "api_url": "https://rseng.github.io/software/api/repos/github/aberer/RogueNaRok"}, {"uid": "github/chanzuckerberg/idseq-dag", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/idseq-dag", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/idseq-dag"}, {"uid": "github/chanzuckerberg/shasta", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/shasta", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/shasta"}, {"uid": "github/chanzuckerberg/cellxgene", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/cellxgene", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/cellxgene"}, {"uid": "github/lamyj/odil", "html_url": "https://rseng.github.io/software/repository/github/lamyj/odil", "api_url": "https://rseng.github.io/software/api/repos/github/lamyj/odil"}, {"uid": "github/CyclotronResearchCentre/bidsme", "html_url": "https://rseng.github.io/software/repository/github/CyclotronResearchCentre/bidsme", "api_url": "https://rseng.github.io/software/api/repos/github/CyclotronResearchCentre/bidsme"}, {"uid": "github/ccsosa/GOCompare", "html_url": "https://rseng.github.io/software/repository/github/ccsosa/GOCompare", "api_url": "https://rseng.github.io/software/api/repos/github/ccsosa/GOCompare"}, {"uid": "github/nationalparkservice/NPSdataverse", "html_url": "https://rseng.github.io/software/repository/github/nationalparkservice/NPSdataverse", "api_url": "https://rseng.github.io/software/api/repos/github/nationalparkservice/NPSdataverse"}, {"uid": "github/schochastics/graphlayouts", "html_url": "https://rseng.github.io/software/repository/github/schochastics/graphlayouts", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/graphlayouts"}, {"uid": "github/schochastics/signnet", "html_url": "https://rseng.github.io/software/repository/github/schochastics/signnet", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/signnet"}, {"uid": "github/schochastics/netrankr", "html_url": "https://rseng.github.io/software/repository/github/schochastics/netrankr", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/netrankr"}, {"uid": "github/RichardMoot/LinearOne", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/LinearOne", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/LinearOne"}, {"uid": "github/RichardMoot/GrailLight", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/GrailLight", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/GrailLight"}, {"uid": "github/RWTH-EBC/AixWeather", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixWeather", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixWeather"}, {"uid": "github/RWTH-EBC/districtgenerator", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/districtgenerator", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/districtgenerator"}, {"uid": "github/RWTH-EBC/AixCaliBuHA", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixCaliBuHA", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixCaliBuHA"}, {"uid": "github/RWTH-EBC/FiLiP", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/FiLiP", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/FiLiP"}, {"uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "html_url": "https://rseng.github.io/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "api_url": "https://rseng.github.io/software/api/repos/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-"}, {"uid": "github/LQYoLH/CnnCrispr", "html_url": "https://rseng.github.io/software/repository/github/LQYoLH/CnnCrispr", "api_url": "https://rseng.github.io/software/api/repos/github/LQYoLH/CnnCrispr"}, {"uid": "github/sid-krish/Rhometa_Full_Genome", "html_url": "https://rseng.github.io/software/repository/github/sid-krish/Rhometa_Full_Genome", "api_url": "https://rseng.github.io/software/api/repos/github/sid-krish/Rhometa_Full_Genome"}, {"uid": "github/cinemascience/cinema_snap", "html_url": "https://rseng.github.io/software/repository/github/cinemascience/cinema_snap", "api_url": "https://rseng.github.io/software/api/repos/github/cinemascience/cinema_snap"}, {"uid": "github/hsci-r/finnish-media-scrapers", "html_url": "https://rseng.github.io/software/repository/github/hsci-r/finnish-media-scrapers", "api_url": "https://rseng.github.io/software/api/repos/github/hsci-r/finnish-media-scrapers"}, {"uid": "github/mrteetoe/HOI", "html_url": "https://rseng.github.io/software/repository/github/mrteetoe/HOI", "api_url": "https://rseng.github.io/software/api/repos/github/mrteetoe/HOI"}, {"uid": "github/kanaverse/kana", "html_url": "https://rseng.github.io/software/repository/github/kanaverse/kana", "api_url": "https://rseng.github.io/software/api/repos/github/kanaverse/kana"}, {"uid": "github/emsig/elfe3D", "html_url": "https://rseng.github.io/software/repository/github/emsig/elfe3D", "api_url": "https://rseng.github.io/software/api/repos/github/emsig/elfe3D"}, {"uid": "github/pmelsted/pizzly", "html_url": "https://rseng.github.io/software/repository/github/pmelsted/pizzly", "api_url": "https://rseng.github.io/software/api/repos/github/pmelsted/pizzly"}, {"uid": "github/stermzsofi/TiDE", "html_url": "https://rseng.github.io/software/repository/github/stermzsofi/TiDE", "api_url": "https://rseng.github.io/software/api/repos/github/stermzsofi/TiDE"}, {"uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "html_url": "https://rseng.github.io/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "api_url": "https://rseng.github.io/software/api/repos/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images"}, {"uid": "github/dragontaoran/sleev", "html_url": "https://rseng.github.io/software/repository/github/dragontaoran/sleev", "api_url": "https://rseng.github.io/software/api/repos/github/dragontaoran/sleev"}, {"uid": "github/grimme-lab/xtb", "html_url": "https://rseng.github.io/software/repository/github/grimme-lab/xtb", "api_url": "https://rseng.github.io/software/api/repos/github/grimme-lab/xtb"}, {"uid": "github/rhernandvel/ViromeXplore", "html_url": "https://rseng.github.io/software/repository/github/rhernandvel/ViromeXplore", "api_url": "https://rseng.github.io/software/api/repos/github/rhernandvel/ViromeXplore"}, {"uid": "github/bbercovici/SBGAT", "html_url": "https://rseng.github.io/software/repository/github/bbercovici/SBGAT", "api_url": "https://rseng.github.io/software/api/repos/github/bbercovici/SBGAT"}, {"uid": "github/nadvornikjiri/HiSS-Cube", "html_url": "https://rseng.github.io/software/repository/github/nadvornikjiri/HiSS-Cube", "api_url": "https://rseng.github.io/software/api/repos/github/nadvornikjiri/HiSS-Cube"}, {"uid": "github/msm550/DMATIS", "html_url": "https://rseng.github.io/software/repository/github/msm550/DMATIS", "api_url": "https://rseng.github.io/software/api/repos/github/msm550/DMATIS"}, {"uid": "github/robynlm/sphereint", "html_url": "https://rseng.github.io/software/repository/github/robynlm/sphereint", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/sphereint"}, {"uid": "github/robynlm/ICPertFLRW", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ICPertFLRW", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ICPertFLRW"}, {"uid": "github/robynlm/ebweyl", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ebweyl", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ebweyl"}, {"uid": "github/JamesKirk11/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/JamesKirk11/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/JamesKirk11/Tiberius"}, {"uid": "github/SIOSlab/NEXO", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/NEXO", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/NEXO"}, {"uid": "github/SIOSlab/exodetbox", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/exodetbox", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/exodetbox"}, {"uid": "github/lmcinnes/umap", "html_url": "https://rseng.github.io/software/repository/github/lmcinnes/umap", "api_url": "https://rseng.github.io/software/api/repos/github/lmcinnes/umap"}, {"uid": "github/rordenlab/dcm2niix", "html_url": "https://rseng.github.io/software/repository/github/rordenlab/dcm2niix", "api_url": "https://rseng.github.io/software/api/repos/github/rordenlab/dcm2niix"}, {"uid": "github/mommermi/photometrypipeline", "html_url": "https://rseng.github.io/software/repository/github/mommermi/photometrypipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mommermi/photometrypipeline"}, {"uid": "github/pyBRAvo/pyBRAvo", "html_url": "https://rseng.github.io/software/repository/github/pyBRAvo/pyBRAvo", "api_url": "https://rseng.github.io/software/api/repos/github/pyBRAvo/pyBRAvo"}, {"uid": "github/kinleyid/tempodisco", "html_url": "https://rseng.github.io/software/repository/github/kinleyid/tempodisco", "api_url": "https://rseng.github.io/software/api/repos/github/kinleyid/tempodisco"}, {"uid": "github/MBoemo/DNAscent", "html_url": "https://rseng.github.io/software/repository/github/MBoemo/DNAscent", "api_url": "https://rseng.github.io/software/api/repos/github/MBoemo/DNAscent"}, {"uid": "github/fenderglass/Ragout", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Ragout", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Ragout"}, {"uid": "github/fenderglass/Flye", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Flye"}, {"uid": "github/philbull/RadioFisher", "html_url": "https://rseng.github.io/software/repository/github/philbull/RadioFisher", "api_url": "https://rseng.github.io/software/api/repos/github/philbull/RadioFisher"}, {"uid": "github/javicarron/pynkowski", "html_url": "https://rseng.github.io/software/repository/github/javicarron/pynkowski", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/pynkowski"}, {"uid": "github/javicarron/mtneedlet", "html_url": "https://rseng.github.io/software/repository/github/javicarron/mtneedlet", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/mtneedlet"}, {"uid": "github/karlotness/adrt", "html_url": "https://rseng.github.io/software/repository/github/karlotness/adrt", "api_url": "https://rseng.github.io/software/api/repos/github/karlotness/adrt"}, {"uid": "github/silx-kit/pyFAI", "html_url": "https://rseng.github.io/software/repository/github/silx-kit/pyFAI", "api_url": "https://rseng.github.io/software/api/repos/github/silx-kit/pyFAI"}, {"uid": "github/rust-bio/rust-bio-tools", "html_url": "https://rseng.github.io/software/repository/github/rust-bio/rust-bio-tools", "api_url": "https://rseng.github.io/software/api/repos/github/rust-bio/rust-bio-tools"}, {"uid": "github/davidebolo1993/TRiCoLOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/TRiCoLOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/TRiCoLOR"}, {"uid": "github/davidebolo1993/VISOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/VISOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/VISOR"}, {"uid": "github/GWang2022/iGDP", "html_url": "https://rseng.github.io/software/repository/github/GWang2022/iGDP", "api_url": "https://rseng.github.io/software/api/repos/github/GWang2022/iGDP"}, {"uid": "github/MannLabs/alphapept", "html_url": "https://rseng.github.io/software/repository/github/MannLabs/alphapept", "api_url": "https://rseng.github.io/software/api/repos/github/MannLabs/alphapept"}, {"uid": "github/chrishales/pieflag", "html_url": "https://rseng.github.io/software/repository/github/chrishales/pieflag", "api_url": "https://rseng.github.io/software/api/repos/github/chrishales/pieflag"}, {"uid": "github/aidenlab/juicer", "html_url": "https://rseng.github.io/software/repository/github/aidenlab/juicer", "api_url": "https://rseng.github.io/software/api/repos/github/aidenlab/juicer"}, {"uid": "github/Yida-Lin/libxdf", "html_url": "https://rseng.github.io/software/repository/github/Yida-Lin/libxdf", "api_url": "https://rseng.github.io/software/api/repos/github/Yida-Lin/libxdf"}, {"uid": "github/ChenYangyao/hipp", "html_url": "https://rseng.github.io/software/repository/github/ChenYangyao/hipp", "api_url": "https://rseng.github.io/software/api/repos/github/ChenYangyao/hipp"}, {"uid": "github/tripathi/Atmospheric-Athena", "html_url": "https://rseng.github.io/software/repository/github/tripathi/Atmospheric-Athena", "api_url": "https://rseng.github.io/software/api/repos/github/tripathi/Atmospheric-Athena"}, {"uid": "github/CFSAN-Biostatistics/SeroTools", "html_url": "https://rseng.github.io/software/repository/github/CFSAN-Biostatistics/SeroTools", "api_url": "https://rseng.github.io/software/api/repos/github/CFSAN-Biostatistics/SeroTools"}, {"uid": "github/qtltools/qtltools", "html_url": "https://rseng.github.io/software/repository/github/qtltools/qtltools", "api_url": "https://rseng.github.io/software/api/repos/github/qtltools/qtltools"}, {"uid": "github/guilledufort/EMVC-2", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EMVC-2", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EMVC-2"}, {"uid": "github/guilledufort/EnanoFASTQ", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EnanoFASTQ", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EnanoFASTQ"}, {"uid": "github/kim8517/RVSNUpy", "html_url": "https://rseng.github.io/software/repository/github/kim8517/RVSNUpy", "api_url": "https://rseng.github.io/software/api/repos/github/kim8517/RVSNUpy"}, {"uid": "github/Bonfanti88/MCMCI", "html_url": "https://rseng.github.io/software/repository/github/Bonfanti88/MCMCI", "api_url": "https://rseng.github.io/software/api/repos/github/Bonfanti88/MCMCI"}, {"uid": "github/flu-crew/smot", "html_url": "https://rseng.github.io/software/repository/github/flu-crew/smot", "api_url": "https://rseng.github.io/software/api/repos/github/flu-crew/smot"}, {"uid": "github/jdswinbank/Comet", "html_url": "https://rseng.github.io/software/repository/github/jdswinbank/Comet", "api_url": "https://rseng.github.io/software/api/repos/github/jdswinbank/Comet"}, {"uid": "github/jdhenshaw/SCOUSE", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/SCOUSE", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/SCOUSE"}, {"uid": "github/jdhenshaw/scousepy", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/scousepy", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/scousepy"}, {"uid": "github/jdhenshaw/acorns", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/acorns", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/acorns"}, {"uid": "github/MorgansLab/OSCILOS_Long", "html_url": "https://rseng.github.io/software/repository/github/MorgansLab/OSCILOS_Long", "api_url": "https://rseng.github.io/software/api/repos/github/MorgansLab/OSCILOS_Long"}, {"uid": "github/mengaldo/PySPOD", "html_url": "https://rseng.github.io/software/repository/github/mengaldo/PySPOD", "api_url": "https://rseng.github.io/software/api/repos/github/mengaldo/PySPOD"}, {"uid": "github/nh13/DWGSIM", "html_url": "https://rseng.github.io/software/repository/github/nh13/DWGSIM", "api_url": "https://rseng.github.io/software/api/repos/github/nh13/DWGSIM"}, {"uid": "github/atomneb/AtomNeb-py", "html_url": "https://rseng.github.io/software/repository/github/atomneb/AtomNeb-py", "api_url": "https://rseng.github.io/software/api/repos/github/atomneb/AtomNeb-py"}, {"uid": "github/Simthembile/cosmo-pipeline", "html_url": "https://rseng.github.io/software/repository/github/Simthembile/cosmo-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/Simthembile/cosmo-pipeline"}, {"uid": "github/marcelauliano/MitoHiFi", "html_url": "https://rseng.github.io/software/repository/github/marcelauliano/MitoHiFi", "api_url": "https://rseng.github.io/software/api/repos/github/marcelauliano/MitoHiFi"}, {"uid": "github/yuliadm/mixComp", "html_url": "https://rseng.github.io/software/repository/github/yuliadm/mixComp", "api_url": "https://rseng.github.io/software/api/repos/github/yuliadm/mixComp"}, {"uid": "github/AllenInstitute/bmtk", "html_url": "https://rseng.github.io/software/repository/github/AllenInstitute/bmtk", "api_url": "https://rseng.github.io/software/api/repos/github/AllenInstitute/bmtk"}, {"uid": "github/tcallister/autoregressive-bbh-inference", "html_url": "https://rseng.github.io/software/repository/github/tcallister/autoregressive-bbh-inference", "api_url": "https://rseng.github.io/software/api/repos/github/tcallister/autoregressive-bbh-inference"}, {"uid": "github/hposborn/MonoTools", "html_url": "https://rseng.github.io/software/repository/github/hposborn/MonoTools", "api_url": "https://rseng.github.io/software/api/repos/github/hposborn/MonoTools"}, {"uid": "github/RainthunderWYL/LoRD", "html_url": "https://rseng.github.io/software/repository/github/RainthunderWYL/LoRD", "api_url": "https://rseng.github.io/software/api/repos/github/RainthunderWYL/LoRD"}, {"uid": "github/ryokbys/nap", "html_url": "https://rseng.github.io/software/repository/github/ryokbys/nap", "api_url": "https://rseng.github.io/software/api/repos/github/ryokbys/nap"}, {"uid": "github/su2code/SU2", "html_url": "https://rseng.github.io/software/repository/github/su2code/SU2", "api_url": "https://rseng.github.io/software/api/repos/github/su2code/SU2"}, {"uid": "github/RitchieLab/hudson", "html_url": "https://rseng.github.io/software/repository/github/RitchieLab/hudson", "api_url": "https://rseng.github.io/software/api/repos/github/RitchieLab/hudson"}, {"uid": "github/ConnorDonegan/geostan", "html_url": "https://rseng.github.io/software/repository/github/ConnorDonegan/geostan", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorDonegan/geostan"}, {"uid": "github/epigenelabs/inmoose", "html_url": "https://rseng.github.io/software/repository/github/epigenelabs/inmoose", "api_url": "https://rseng.github.io/software/api/repos/github/epigenelabs/inmoose"}, {"uid": "github/neherlab/nextalign", "html_url": "https://rseng.github.io/software/repository/github/neherlab/nextalign", "api_url": "https://rseng.github.io/software/api/repos/github/neherlab/nextalign"}, {"uid": "github/fumi-github/omicwas", "html_url": "https://rseng.github.io/software/repository/github/fumi-github/omicwas", "api_url": "https://rseng.github.io/software/api/repos/github/fumi-github/omicwas"}, {"uid": "github/brsynth/rp2paths", "html_url": "https://rseng.github.io/software/repository/github/brsynth/rp2paths", "api_url": "https://rseng.github.io/software/api/repos/github/brsynth/rp2paths"}, {"uid": "github/jdber1/opendrop", "html_url": "https://rseng.github.io/software/repository/github/jdber1/opendrop", "api_url": "https://rseng.github.io/software/api/repos/github/jdber1/opendrop"}, {"uid": "github/ModellingWebLab/chaste-codegen", "html_url": "https://rseng.github.io/software/repository/github/ModellingWebLab/chaste-codegen", "api_url": "https://rseng.github.io/software/api/repos/github/ModellingWebLab/chaste-codegen"}, {"uid": "github/sap218/jabberwocky", "html_url": "https://rseng.github.io/software/repository/github/sap218/jabberwocky", "api_url": "https://rseng.github.io/software/api/repos/github/sap218/jabberwocky"}, {"uid": "github/franciscozorrilla/metaGEM", "html_url": "https://rseng.github.io/software/repository/github/franciscozorrilla/metaGEM", "api_url": "https://rseng.github.io/software/api/repos/github/franciscozorrilla/metaGEM"}, {"uid": "github/DHortaD/Lux", "html_url": "https://rseng.github.io/software/repository/github/DHortaD/Lux", "api_url": "https://rseng.github.io/software/api/repos/github/DHortaD/Lux"}, {"uid": "github/conda/conda-package-handling", "html_url": "https://rseng.github.io/software/repository/github/conda/conda-package-handling", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda-package-handling"}, {"uid": "github/conda/pycosat", "html_url": "https://rseng.github.io/software/repository/github/conda/pycosat", "api_url": "https://rseng.github.io/software/api/repos/github/conda/pycosat"}, {"uid": "github/conda/conda", "html_url": "https://rseng.github.io/software/repository/github/conda/conda", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda"}, {"uid": "github/Alcampopiano/hypothesize", "html_url": "https://rseng.github.io/software/repository/github/Alcampopiano/hypothesize", "api_url": "https://rseng.github.io/software/api/repos/github/Alcampopiano/hypothesize"}, {"uid": "github/adcameron/ffancy", "html_url": "https://rseng.github.io/software/repository/github/adcameron/ffancy", "api_url": "https://rseng.github.io/software/api/repos/github/adcameron/ffancy"}, {"uid": "github/LBNL-ETA/MSWH", "html_url": "https://rseng.github.io/software/repository/github/LBNL-ETA/MSWH", "api_url": "https://rseng.github.io/software/api/repos/github/LBNL-ETA/MSWH"}, {"uid": "github/tramarobin/fctSPM", "html_url": "https://rseng.github.io/software/repository/github/tramarobin/fctSPM", "api_url": "https://rseng.github.io/software/api/repos/github/tramarobin/fctSPM"}, {"uid": "github/tidymodels/stacks", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/stacks", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/stacks"}, {"uid": "github/tidymodels/infer", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/infer", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/infer"}, {"uid": "github/sirocco-rt/sirocco", "html_url": "https://rseng.github.io/software/repository/github/sirocco-rt/sirocco", "api_url": "https://rseng.github.io/software/api/repos/github/sirocco-rt/sirocco"}, {"uid": "github/dtcc-platform/dtcc-builder", "html_url": "https://rseng.github.io/software/repository/github/dtcc-platform/dtcc-builder", "api_url": "https://rseng.github.io/software/api/repos/github/dtcc-platform/dtcc-builder"}, {"uid": "github/kpenev/poet", "html_url": "https://rseng.github.io/software/repository/github/kpenev/poet", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/poet"}, {"uid": "github/kpenev/AstroWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AstroWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AstroWISP"}, {"uid": "github/kpenev/AutoWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AutoWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AutoWISP"}, {"uid": "github/fogellab/multiWGCNA", "html_url": "https://rseng.github.io/software/repository/github/fogellab/multiWGCNA", "api_url": "https://rseng.github.io/software/api/repos/github/fogellab/multiWGCNA"}, {"uid": "github/ExeClim/Isca", "html_url": "https://rseng.github.io/software/repository/github/ExeClim/Isca", "api_url": "https://rseng.github.io/software/api/repos/github/ExeClim/Isca"}, {"uid": "github/ethicsai/ethical-smart-grid", "html_url": "https://rseng.github.io/software/repository/github/ethicsai/ethical-smart-grid", "api_url": "https://rseng.github.io/software/api/repos/github/ethicsai/ethical-smart-grid"}, {"uid": "github/kpicteam/kpic_pipeline", "html_url": "https://rseng.github.io/software/repository/github/kpicteam/kpic_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/kpicteam/kpic_pipeline"}, {"uid": "github/ZhantianXu/PISAD", "html_url": "https://rseng.github.io/software/repository/github/ZhantianXu/PISAD", "api_url": "https://rseng.github.io/software/api/repos/github/ZhantianXu/PISAD"}, {"uid": "github/braindatalab/PyBispectra", "html_url": "https://rseng.github.io/software/repository/github/braindatalab/PyBispectra", "api_url": "https://rseng.github.io/software/api/repos/github/braindatalab/PyBispectra"}, {"uid": "github/ESMValGroup/ESMValCore", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValCore", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValCore"}, {"uid": "github/ESMValGroup/ESMValTool", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValTool", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValTool"}, {"uid": "github/c-white/blacklight", "html_url": "https://rseng.github.io/software/repository/github/c-white/blacklight", "api_url": "https://rseng.github.io/software/api/repos/github/c-white/blacklight"}, {"uid": "github/LondonBiofoundry/basicsynbio", "html_url": "https://rseng.github.io/software/repository/github/LondonBiofoundry/basicsynbio", "api_url": "https://rseng.github.io/software/api/repos/github/LondonBiofoundry/basicsynbio"}, {"uid": "github/ggciag/mandyoc", "html_url": "https://rseng.github.io/software/repository/github/ggciag/mandyoc", "api_url": "https://rseng.github.io/software/api/repos/github/ggciag/mandyoc"}, {"uid": "github/rahil-makadia/grss", "html_url": "https://rseng.github.io/software/repository/github/rahil-makadia/grss", "api_url": "https://rseng.github.io/software/api/repos/github/rahil-makadia/grss"}, {"uid": "github/Romea/romea-ros2-lidar", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-lidar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-lidar"}, {"uid": "github/Romea/romea-core-filtering", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-filtering", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-filtering"}, {"uid": "github/Romea/adap2e", "html_url": "https://rseng.github.io/software/repository/github/Romea/adap2e", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/adap2e"}, {"uid": "github/Romea/alpo", "html_url": "https://rseng.github.io/software/repository/github/Romea/alpo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/alpo"}, {"uid": "github/Romea/romea-ros2-teleop", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-teleop", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-teleop"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-core-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-imu"}, {"uid": "github/Romea/romea-ros2-cmd-mux", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-cmd-mux", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-cmd-mux"}, {"uid": "github/Romea/romea-ros2-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-camera"}, {"uid": "github/Romea/romea-ros2-localisation-utils", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-localisation-utils", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-localisation-utils"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-core"}, {"uid": "github/Romea/romea-ros2-mobile-base", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-mobile-base", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-mobile-base"}, {"uid": "github/Romea/husky", "html_url": "https://rseng.github.io/software/repository/github/Romea/husky", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/husky"}, {"uid": "github/Romea/hunter", "html_url": "https://rseng.github.io/software/repository/github/Romea/hunter", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/hunter"}, {"uid": "github/Romea/scout", "html_url": "https://rseng.github.io/software/repository/github/Romea/scout", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/scout"}, {"uid": "github/Romea/romea-ros2-stereo-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-stereo-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-stereo-camera"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-core"}, {"uid": "github/Romea/romea-core-rtls", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-rtls", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-rtls"}, {"uid": "github/Romea/romea-core-localisation-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-localisation-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-localisation-gps"}, {"uid": "github/Romea/romea-ros2-joy", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-joy", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-joy"}, {"uid": "github/Romea/cinteo", "html_url": "https://rseng.github.io/software/repository/github/Romea/cinteo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/cinteo"}, {"uid": "github/Romea/romea-core-path", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-path", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-path"}, {"uid": "github/Romea/romea-core-common", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-common", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-common"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-gps"}, {"uid": "github/Romea/romea-ros2-rgbd-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-rgbd-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-rgbd-camera"}, {"uid": "github/Romea/romea-ros2-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-imu"}, {"uid": "github/Romea/aroco", "html_url": "https://rseng.github.io/software/repository/github/Romea/aroco", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/aroco"}, {"uid": "github/Romea/romea-core-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-gps"}, {"uid": "github/Romea/robucar", "html_url": "https://rseng.github.io/software/repository/github/Romea/robucar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/robucar"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-core"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin"}, {"uid": "github/smaret/thindisk", "html_url": "https://rseng.github.io/software/repository/github/smaret/thindisk", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/thindisk"}, {"uid": "github/smaret/astrochem", "html_url": "https://rseng.github.io/software/repository/github/smaret/astrochem", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/astrochem"}, {"uid": "github/adigenova/wengan", "html_url": "https://rseng.github.io/software/repository/github/adigenova/wengan", "api_url": "https://rseng.github.io/software/api/repos/github/adigenova/wengan"}, {"uid": "github/christopherburke/tess-point", "html_url": "https://rseng.github.io/software/repository/github/christopherburke/tess-point", "api_url": "https://rseng.github.io/software/api/repos/github/christopherburke/tess-point"}, {"uid": "github/nabeelre/NIMBLE", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/NIMBLE", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/NIMBLE"}, {"uid": "github/nabeelre/BTSbot", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/BTSbot", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/BTSbot"}, {"uid": "github/TommyJones/tidylda", "html_url": "https://rseng.github.io/software/repository/github/TommyJones/tidylda", "api_url": "https://rseng.github.io/software/api/repos/github/TommyJones/tidylda"}, {"uid": "github/pudeIko/piva", "html_url": "https://rseng.github.io/software/repository/github/pudeIko/piva", "api_url": "https://rseng.github.io/software/api/repos/github/pudeIko/piva"}, {"uid": "github/milanofthe/pathsim", "html_url": "https://rseng.github.io/software/repository/github/milanofthe/pathsim", "api_url": "https://rseng.github.io/software/api/repos/github/milanofthe/pathsim"}, {"uid": "github/cosimameyer/overviewR", "html_url": "https://rseng.github.io/software/repository/github/cosimameyer/overviewR", "api_url": "https://rseng.github.io/software/api/repos/github/cosimameyer/overviewR"}, {"uid": "github/Acellera/htmd", "html_url": "https://rseng.github.io/software/repository/github/Acellera/htmd", "api_url": "https://rseng.github.io/software/api/repos/github/Acellera/htmd"}, {"uid": "github/jan-orkisz/colume", "html_url": "https://rseng.github.io/software/repository/github/jan-orkisz/colume", "api_url": "https://rseng.github.io/software/api/repos/github/jan-orkisz/colume"}, {"uid": "github/naonori/hitomi", "html_url": "https://rseng.github.io/software/repository/github/naonori/hitomi", "api_url": "https://rseng.github.io/software/api/repos/github/naonori/hitomi"}, {"uid": "github/gerthmicha/wolbachia-mlst", "html_url": "https://rseng.github.io/software/repository/github/gerthmicha/wolbachia-mlst", "api_url": "https://rseng.github.io/software/api/repos/github/gerthmicha/wolbachia-mlst"}, {"uid": "github/tkchafin/autostreamtree", "html_url": "https://rseng.github.io/software/repository/github/tkchafin/autostreamtree", "api_url": "https://rseng.github.io/software/api/repos/github/tkchafin/autostreamtree"}, {"uid": "github/PTsolvers/JustRelax.jl", "html_url": "https://rseng.github.io/software/repository/github/PTsolvers/JustRelax.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PTsolvers/JustRelax.jl"}, {"uid": "github/viromelab/tracespipe", "html_url": "https://rseng.github.io/software/repository/github/viromelab/tracespipe", "api_url": "https://rseng.github.io/software/api/repos/github/viromelab/tracespipe"}, {"uid": "github/barnabytprowe/imcom", "html_url": "https://rseng.github.io/software/repository/github/barnabytprowe/imcom", "api_url": "https://rseng.github.io/software/api/repos/github/barnabytprowe/imcom"}, {"uid": "github/JelfsMaterialsGroup/stk", "html_url": "https://rseng.github.io/software/repository/github/JelfsMaterialsGroup/stk", "api_url": "https://rseng.github.io/software/api/repos/github/JelfsMaterialsGroup/stk"}, {"uid": "github/online-ml/deep-river", "html_url": "https://rseng.github.io/software/repository/github/online-ml/deep-river", "api_url": "https://rseng.github.io/software/api/repos/github/online-ml/deep-river"}, {"uid": "github/RemoteSensingTools/vSmartMOM.jl", "html_url": "https://rseng.github.io/software/repository/github/RemoteSensingTools/vSmartMOM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RemoteSensingTools/vSmartMOM.jl"}, {"uid": "github/nworbde/dStar", "html_url": "https://rseng.github.io/software/repository/github/nworbde/dStar", "api_url": "https://rseng.github.io/software/api/repos/github/nworbde/dStar"}, {"uid": "github/ECP-WarpX/WarpX", "html_url": "https://rseng.github.io/software/repository/github/ECP-WarpX/WarpX", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-WarpX/WarpX"}, {"uid": "github/pipliggins/EVolve", "html_url": "https://rseng.github.io/software/repository/github/pipliggins/EVolve", "api_url": "https://rseng.github.io/software/api/repos/github/pipliggins/EVolve"}, {"uid": "github/NLeSC/xenon-flow", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-flow", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-flow"}, {"uid": "github/NLeSC/eEcology-Annotation-WS", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Annotation-WS", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Annotation-WS"}, {"uid": "github/NLeSC/DiVE", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/DiVE", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/DiVE"}, {"uid": "github/NLeSC/nlesc-serverless-boilerplate", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/nlesc-serverless-boilerplate", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/nlesc-serverless-boilerplate"}, {"uid": "github/NLeSC/SalientDetector-python", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-python", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-python"}, {"uid": "github/NLeSC/eAstroViz", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eAstroViz", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eAstroViz"}, {"uid": "github/NLeSC/structure-from-motion", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/structure-from-motion", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/structure-from-motion"}, {"uid": "github/NLeSC/baklava", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/baklava", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/baklava"}, {"uid": "github/NLeSC/SalientDetector-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-matlab"}, {"uid": "github/NLeSC/pycoeman", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pycoeman", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pycoeman"}, {"uid": "github/NLeSC/spot", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/spot", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/spot"}, {"uid": "github/NLeSC/PattyAnalytics", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyAnalytics"}, {"uid": "github/NLeSC/ahn-pointcloud-viewer-ws", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ahn-pointcloud-viewer-ws"}, {"uid": "github/NLeSC/UncertaintyVisualization", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/UncertaintyVisualization", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/UncertaintyVisualization"}, {"uid": "github/NLeSC/python-template", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-template", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-template"}, {"uid": "github/NLeSC/eEcology-Classification", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Classification", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Classification"}, {"uid": "github/NLeSC/eEcology-script-wrapper", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-script-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-script-wrapper"}, {"uid": "github/NLeSC/eEcology-SMS-reciever", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-SMS-reciever", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-SMS-reciever"}, {"uid": "github/NLeSC/xenon-grpc", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-grpc"}, {"uid": "github/NLeSC/MAGMa", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/MAGMa", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/MAGMa"}, {"uid": "github/NLeSC/cptm", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/cptm", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/cptm"}, {"uid": "github/NLeSC/eSalsa-MPI", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eSalsa-MPI", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eSalsa-MPI"}, {"uid": "github/NLeSC/lokum", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/lokum", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/lokum"}, {"uid": "github/NLeSC/docker-couch-admin", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/docker-couch-admin", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/docker-couch-admin"}, {"uid": "github/NLeSC/python-pcl", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-pcl", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-pcl"}, {"uid": "github/NLeSC/mcfly", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/mcfly", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/mcfly"}, {"uid": "github/NLeSC/compressing-the-sky", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/compressing-the-sky", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/compressing-the-sky"}, {"uid": "github/NLeSC/OCTSegmentation", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/OCTSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/OCTSegmentation"}, {"uid": "github/NLeSC/root-conda-recipes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/root-conda-recipes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/root-conda-recipes"}, {"uid": "github/NLeSC/noodles", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/noodles", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/noodles"}, {"uid": "github/NLeSC/osmium", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/osmium", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/osmium"}, {"uid": "github/NLeSC/case-law-app", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/case-law-app", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/case-law-app"}, {"uid": "github/NLeSC/esibayes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/esibayes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/esibayes"}, {"uid": "github/NLeSC/ShiCo", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ShiCo", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ShiCo"}, {"uid": "github/NLeSC/boatswain", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/boatswain", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/boatswain"}, {"uid": "github/NLeSC/SalientDescriptor-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDescriptor-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDescriptor-matlab"}, {"uid": "github/NLeSC/Massive-PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Massive-PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Massive-PotreeConverter"}, {"uid": "github/NLeSC/Chemical-Analytics-Platform", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Chemical-Analytics-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Chemical-Analytics-Platform"}, {"uid": "github/NLeSC/fairdatapoint", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/fairdatapoint", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/fairdatapoint"}, {"uid": "github/NLeSC/hadrianus-scripts", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/hadrianus-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/hadrianus-scripts"}, {"uid": "github/NLeSC/EEG-epilepsy-diagnosis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/EEG-epilepsy-diagnosis"}, {"uid": "github/NLeSC/ExtJS-DateTime", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ExtJS-DateTime", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ExtJS-DateTime"}, {"uid": "github/NLeSC/xenon-cli", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-cli", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-cli"}, {"uid": "github/NLeSC/pattyvis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pattyvis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pattyvis"}, {"uid": "github/NLeSC/PattyData", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyData", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyData"}, {"uid": "github/NLeSC/xtas", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xtas", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xtas"}, {"uid": "github/NLeSC/litstudy", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/litstudy", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/litstudy"}, {"uid": "github/dlakaplan/pulsarsurveyscraper", "html_url": "https://rseng.github.io/software/repository/github/dlakaplan/pulsarsurveyscraper", "api_url": "https://rseng.github.io/software/api/repos/github/dlakaplan/pulsarsurveyscraper"}, {"uid": "github/Sudaraka88/LDWeaver", "html_url": "https://rseng.github.io/software/repository/github/Sudaraka88/LDWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/Sudaraka88/LDWeaver"}, {"uid": "github/simon-prunet/defringe", "html_url": "https://rseng.github.io/software/repository/github/simon-prunet/defringe", "api_url": "https://rseng.github.io/software/api/repos/github/simon-prunet/defringe"}, {"uid": "github/bc3LC/gcamreport", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/gcamreport", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/gcamreport"}, {"uid": "github/bc3LC/medusa", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/medusa"}, {"uid": "github/bc3LC/rhap", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/rhap", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/rhap"}, {"uid": "github/copasi/basico", "html_url": "https://rseng.github.io/software/repository/github/copasi/basico", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/basico"}, {"uid": "github/copasi/COPASI", "html_url": "https://rseng.github.io/software/repository/github/copasi/COPASI", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/COPASI"}, {"uid": "github/dengzhuo-AI/Real-Fundus", "html_url": "https://rseng.github.io/software/repository/github/dengzhuo-AI/Real-Fundus", "api_url": "https://rseng.github.io/software/api/repos/github/dengzhuo-AI/Real-Fundus"}, {"uid": "github/tholoien/XDGMM", "html_url": "https://rseng.github.io/software/repository/github/tholoien/XDGMM", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/XDGMM"}, {"uid": "github/tholoien/empiriciSN", "html_url": "https://rseng.github.io/software/repository/github/tholoien/empiriciSN", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/empiriciSN"}, {"uid": "github/stefanhiemer/topoptlab", "html_url": "https://rseng.github.io/software/repository/github/stefanhiemer/topoptlab", "api_url": "https://rseng.github.io/software/api/repos/github/stefanhiemer/topoptlab"}, {"uid": "github/fmihpc/analysator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/analysator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/analysator"}, {"uid": "github/fmihpc/vlasiator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/vlasiator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/vlasiator"}, {"uid": "github/migueldvb/cine", "html_url": "https://rseng.github.io/software/repository/github/migueldvb/cine", "api_url": "https://rseng.github.io/software/api/repos/github/migueldvb/cine"}, {"uid": "github/metagentools/gbintk", "html_url": "https://rseng.github.io/software/repository/github/metagentools/gbintk", "api_url": "https://rseng.github.io/software/api/repos/github/metagentools/gbintk"}, {"uid": "github/helonghuangastro/exolyn", "html_url": "https://rseng.github.io/software/repository/github/helonghuangastro/exolyn", "api_url": "https://rseng.github.io/software/api/repos/github/helonghuangastro/exolyn"}, {"uid": "github/kemasuda/jnkepler", "html_url": "https://rseng.github.io/software/repository/github/kemasuda/jnkepler", "api_url": "https://rseng.github.io/software/api/repos/github/kemasuda/jnkepler"}, {"uid": "github/cmateu/galstreams", "html_url": "https://rseng.github.io/software/repository/github/cmateu/galstreams", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/galstreams"}, {"uid": "github/cmateu/PyMGC3", "html_url": "https://rseng.github.io/software/repository/github/cmateu/PyMGC3", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/PyMGC3"}, {"uid": "github/weizhongli/cdhit", "html_url": "https://rseng.github.io/software/repository/github/weizhongli/cdhit", "api_url": "https://rseng.github.io/software/api/repos/github/weizhongli/cdhit"}, {"uid": "github/eweitz/ideogram", "html_url": "https://rseng.github.io/software/repository/github/eweitz/ideogram", "api_url": "https://rseng.github.io/software/api/repos/github/eweitz/ideogram"}, {"uid": "github/skendrew/milkywayproject_triggering", "html_url": "https://rseng.github.io/software/repository/github/skendrew/milkywayproject_triggering", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/milkywayproject_triggering"}, {"uid": "github/skendrew/midIR_sensitivity", "html_url": "https://rseng.github.io/software/repository/github/skendrew/midIR_sensitivity", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/midIR_sensitivity"}, {"uid": "github/ihrke/pypillometry", "html_url": "https://rseng.github.io/software/repository/github/ihrke/pypillometry", "api_url": "https://rseng.github.io/software/api/repos/github/ihrke/pypillometry"}, {"uid": "github/C0PEP0D/otto", "html_url": "https://rseng.github.io/software/repository/github/C0PEP0D/otto", "api_url": "https://rseng.github.io/software/api/repos/github/C0PEP0D/otto"}, {"uid": "github/afeinstein20/eleanor", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/eleanor", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/eleanor"}, {"uid": "github/afeinstein20/stella", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/stella", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/stella"}, {"uid": "github/NMBU-Data-Science/RENT", "html_url": "https://rseng.github.io/software/repository/github/NMBU-Data-Science/RENT", "api_url": "https://rseng.github.io/software/api/repos/github/NMBU-Data-Science/RENT"}, {"uid": "github/ntoles/tristan-mp-pitp", "html_url": "https://rseng.github.io/software/repository/github/ntoles/tristan-mp-pitp", "api_url": "https://rseng.github.io/software/api/repos/github/ntoles/tristan-mp-pitp"}, {"uid": "github/phac-nml/mob-suite", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/mob-suite", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/mob-suite"}, {"uid": "github/phac-nml/biohansel", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/biohansel", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/biohansel"}, {"uid": "github/phac-nml/staramr", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/staramr", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/staramr"}, {"uid": "github/TBLabFJD/VariantCallingFJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/VariantCallingFJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/VariantCallingFJD"}, {"uid": "github/TBLabFJD/WHALE", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/WHALE", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/WHALE"}, {"uid": "github/TBLabFJD/DBofAFs", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/DBofAFs", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/DBofAFs"}, {"uid": "github/TBLabFJD/PARROT-FJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/PARROT-FJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/PARROT-FJD"}, {"uid": "github/GammaCascade/GCascade", "html_url": "https://rseng.github.io/software/repository/github/GammaCascade/GCascade", "api_url": "https://rseng.github.io/software/api/repos/github/GammaCascade/GCascade"}, {"uid": "github/MintonGroup/swiftest", "html_url": "https://rseng.github.io/software/repository/github/MintonGroup/swiftest", "api_url": "https://rseng.github.io/software/api/repos/github/MintonGroup/swiftest"}, {"uid": "github/giswqs/lidar", "html_url": "https://rseng.github.io/software/repository/github/giswqs/lidar", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/lidar"}, {"uid": "github/giswqs/geemap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/geemap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/geemap"}, {"uid": "github/giswqs/leafmap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/leafmap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/leafmap"}, {"uid": "github/retostauffer/python-colorspace", "html_url": "https://rseng.github.io/software/repository/github/retostauffer/python-colorspace", "api_url": "https://rseng.github.io/software/api/repos/github/retostauffer/python-colorspace"}, {"uid": "github/COSIMA/regional-mom6", "html_url": "https://rseng.github.io/software/repository/github/COSIMA/regional-mom6", "api_url": "https://rseng.github.io/software/api/repos/github/COSIMA/regional-mom6"}, {"uid": "github/mirapy-org/mirapy", "html_url": "https://rseng.github.io/software/repository/github/mirapy-org/mirapy", "api_url": "https://rseng.github.io/software/api/repos/github/mirapy-org/mirapy"}, {"uid": "github/ixkael/QuickSip", "html_url": "https://rseng.github.io/software/repository/github/ixkael/QuickSip", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/QuickSip"}, {"uid": "github/ixkael/Delight", "html_url": "https://rseng.github.io/software/repository/github/ixkael/Delight", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/Delight"}, {"uid": "github/ixkael/3DEX", "html_url": "https://rseng.github.io/software/repository/github/ixkael/3DEX", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/3DEX"}, {"uid": "github/synthpop-galaxy/synthpop", "html_url": "https://rseng.github.io/software/repository/github/synthpop-galaxy/synthpop", "api_url": "https://rseng.github.io/software/api/repos/github/synthpop-galaxy/synthpop"}, {"uid": "github/dalya/WeirdestGalaxies", "html_url": "https://rseng.github.io/software/repository/github/dalya/WeirdestGalaxies", "api_url": "https://rseng.github.io/software/api/repos/github/dalya/WeirdestGalaxies"}, {"uid": "github/hypre-space/hypredrive", "html_url": "https://rseng.github.io/software/repository/github/hypre-space/hypredrive", "api_url": "https://rseng.github.io/software/api/repos/github/hypre-space/hypredrive"}, {"uid": "github/nathanael-fijalkow/DeepSynth", "html_url": "https://rseng.github.io/software/repository/github/nathanael-fijalkow/DeepSynth", "api_url": "https://rseng.github.io/software/api/repos/github/nathanael-fijalkow/DeepSynth"}, {"uid": "github/KeckObservatory/tilsotua", "html_url": "https://rseng.github.io/software/repository/github/KeckObservatory/tilsotua", "api_url": "https://rseng.github.io/software/api/repos/github/KeckObservatory/tilsotua"}, {"uid": "github/jarvist/Julia-Phonons", "html_url": "https://rseng.github.io/software/repository/github/jarvist/Julia-Phonons", "api_url": "https://rseng.github.io/software/api/repos/github/jarvist/Julia-Phonons"}, {"uid": "github/felixbur/nkululeko", "html_url": "https://rseng.github.io/software/repository/github/felixbur/nkululeko", "api_url": "https://rseng.github.io/software/api/repos/github/felixbur/nkululeko"}, {"uid": "github/mr-superonion/FPFS", "html_url": "https://rseng.github.io/software/repository/github/mr-superonion/FPFS", "api_url": "https://rseng.github.io/software/api/repos/github/mr-superonion/FPFS"}, {"uid": "github/bricoletc/delfies", "html_url": "https://rseng.github.io/software/repository/github/bricoletc/delfies", "api_url": "https://rseng.github.io/software/api/repos/github/bricoletc/delfies"}, {"uid": "github/ptaconet/modisfast", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/modisfast", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/modisfast"}, {"uid": "github/ptaconet/bdd_rntaaf", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/bdd_rntaaf", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/bdd_rntaaf"}, {"uid": "github/shahmoradi/grb_world", "html_url": "https://rseng.github.io/software/repository/github/shahmoradi/grb_world", "api_url": "https://rseng.github.io/software/api/repos/github/shahmoradi/grb_world"}, {"uid": "github/Valcin/BE_HaPPy", "html_url": "https://rseng.github.io/software/repository/github/Valcin/BE_HaPPy", "api_url": "https://rseng.github.io/software/api/repos/github/Valcin/BE_HaPPy"}, {"uid": "github/jonotuke/BREADR", "html_url": "https://rseng.github.io/software/repository/github/jonotuke/BREADR", "api_url": "https://rseng.github.io/software/api/repos/github/jonotuke/BREADR"}, {"uid": "github/PolymerGuy/recolo", "html_url": "https://rseng.github.io/software/repository/github/PolymerGuy/recolo", "api_url": "https://rseng.github.io/software/api/repos/github/PolymerGuy/recolo"}, {"uid": "github/mbejger/polgraw-allsky", "html_url": "https://rseng.github.io/software/repository/github/mbejger/polgraw-allsky", "api_url": "https://rseng.github.io/software/api/repos/github/mbejger/polgraw-allsky"}, {"uid": "github/Fenyutanchan/solar-vSI", "html_url": "https://rseng.github.io/software/repository/github/Fenyutanchan/solar-vSI", "api_url": "https://rseng.github.io/software/api/repos/github/Fenyutanchan/solar-vSI"}, {"uid": "github/GenomePathogenAnalysisService/read-it-and-keep", "html_url": "https://rseng.github.io/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", "api_url": "https://rseng.github.io/software/api/repos/github/GenomePathogenAnalysisService/read-it-and-keep"}, {"uid": "github/vimc/vaultr", "html_url": "https://rseng.github.io/software/repository/github/vimc/vaultr", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/vaultr"}, {"uid": "github/vimc/orderly", "html_url": "https://rseng.github.io/software/repository/github/vimc/orderly", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/orderly"}, {"uid": "github/vimc/dettl", "html_url": "https://rseng.github.io/software/repository/github/vimc/dettl", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/dettl"}, {"uid": "github/luizfelippesr/galmag", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/galmag", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/galmag"}, {"uid": "github/luizfelippesr/magnetizer", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/magnetizer", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/magnetizer"}, {"uid": "github/iAART/aart", "html_url": "https://rseng.github.io/software/repository/github/iAART/aart", "api_url": "https://rseng.github.io/software/api/repos/github/iAART/aart"}, {"uid": "github/babinyurii/recan", "html_url": "https://rseng.github.io/software/repository/github/babinyurii/recan", "api_url": "https://rseng.github.io/software/api/repos/github/babinyurii/recan"}, {"uid": "github/CExA-project/ddc", "html_url": "https://rseng.github.io/software/repository/github/CExA-project/ddc", "api_url": "https://rseng.github.io/software/api/repos/github/CExA-project/ddc"}, {"uid": "github/nickfarrow/GalacticDNSMass", "html_url": "https://rseng.github.io/software/repository/github/nickfarrow/GalacticDNSMass", "api_url": "https://rseng.github.io/software/api/repos/github/nickfarrow/GalacticDNSMass"}, {"uid": "github/PabloMSanAla/fabada", "html_url": "https://rseng.github.io/software/repository/github/PabloMSanAla/fabada", "api_url": "https://rseng.github.io/software/api/repos/github/PabloMSanAla/fabada"}, {"uid": "github/cnellington/Contextualized", "html_url": "https://rseng.github.io/software/repository/github/cnellington/Contextualized", "api_url": "https://rseng.github.io/software/api/repos/github/cnellington/Contextualized"}, {"uid": "github/MIC-DKFZ/HD-BET", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/HD-BET", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/HD-BET"}, {"uid": "github/MIC-DKFZ/TractSeg", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/TractSeg", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/TractSeg"}, {"uid": "github/NathanSandford/Chem-I-Calc", "html_url": "https://rseng.github.io/software/repository/github/NathanSandford/Chem-I-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSandford/Chem-I-Calc"}, {"uid": "github/glis-glis/loci", "html_url": "https://rseng.github.io/software/repository/github/glis-glis/loci", "api_url": "https://rseng.github.io/software/api/repos/github/glis-glis/loci"}, {"uid": "github/hknd23/idcempy", "html_url": "https://rseng.github.io/software/repository/github/hknd23/idcempy", "api_url": "https://rseng.github.io/software/api/repos/github/hknd23/idcempy"}, {"uid": "github/pjedge/longshot", "html_url": "https://rseng.github.io/software/repository/github/pjedge/longshot", "api_url": "https://rseng.github.io/software/api/repos/github/pjedge/longshot"}, {"uid": "github/msyazwanfaid/hilalpy", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalpy", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalpy"}, {"uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report"}, {"uid": "github/msyazwanfaid/hilalimagingdataextraction", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalimagingdataextraction", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalimagingdataextraction"}, {"uid": "github/LebeerLab/tidytacos", "html_url": "https://rseng.github.io/software/repository/github/LebeerLab/tidytacos", "api_url": "https://rseng.github.io/software/api/repos/github/LebeerLab/tidytacos"}, {"uid": "github/frank1010111/bluebonnet", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/bluebonnet", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/bluebonnet"}, {"uid": "github/frank1010111/pywaterflood", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/pywaterflood", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/pywaterflood"}, {"uid": "github/zachetienne/nrpytutorial", "html_url": "https://rseng.github.io/software/repository/github/zachetienne/nrpytutorial", "api_url": "https://rseng.github.io/software/api/repos/github/zachetienne/nrpytutorial"}, {"uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", "html_url": "https://rseng.github.io/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalRegulatoryGenomicsICL/TFBS"}, {"uid": "github/YonghuiDong/RawHummus", "html_url": "https://rseng.github.io/software/repository/github/YonghuiDong/RawHummus", "api_url": "https://rseng.github.io/software/api/repos/github/YonghuiDong/RawHummus"}, {"uid": "github/tsfloss/DensityFieldTools", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/DensityFieldTools", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/DensityFieldTools"}, {"uid": "github/tsfloss/URecon", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/URecon", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/URecon"}, {"uid": "github/tsfloss/BFast", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/BFast", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/BFast"}, {"uid": "github/rabix/cwl-format", "html_url": "https://rseng.github.io/software/repository/github/rabix/cwl-format", "api_url": "https://rseng.github.io/software/api/repos/github/rabix/cwl-format"}, {"uid": "github/GiMattia/PyPLUTO", "html_url": "https://rseng.github.io/software/repository/github/GiMattia/PyPLUTO", "api_url": "https://rseng.github.io/software/api/repos/github/GiMattia/PyPLUTO"}, {"uid": "github/thelfer/MFrontGallery", "html_url": "https://rseng.github.io/software/repository/github/thelfer/MFrontGallery", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/MFrontGallery"}, {"uid": "github/thelfer/mfem-mgis", "html_url": "https://rseng.github.io/software/repository/github/thelfer/mfem-mgis", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/mfem-mgis"}, {"uid": "github/statdivlab/rigr", "html_url": "https://rseng.github.io/software/repository/github/statdivlab/rigr", "api_url": "https://rseng.github.io/software/api/repos/github/statdivlab/rigr"}, {"uid": "github/dfki-ric/movement_primitives", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric/movement_primitives", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric/movement_primitives"}, {"uid": "github/devnums/pyheartlib", "html_url": "https://rseng.github.io/software/repository/github/devnums/pyheartlib", "api_url": "https://rseng.github.io/software/api/repos/github/devnums/pyheartlib"}, {"uid": "github/huchiayu/ParticleGridMapper.jl", "html_url": "https://rseng.github.io/software/repository/github/huchiayu/ParticleGridMapper.jl", "api_url": "https://rseng.github.io/software/api/repos/github/huchiayu/ParticleGridMapper.jl"}, {"uid": "github/simonsobs/so_noise_models", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/so_noise_models", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/so_noise_models"}, {"uid": "github/simonsobs/hmvec", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/hmvec", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/hmvec"}, {"uid": "github/simonsobs/nemo", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/nemo"}, {"uid": "github/simonsobs/mnms", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/mnms", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/mnms"}, {"uid": "github/simonsobs/pixell", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/pixell", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/pixell"}, {"uid": "github/danielapai/bioverse", "html_url": "https://rseng.github.io/software/repository/github/danielapai/bioverse", "api_url": "https://rseng.github.io/software/api/repos/github/danielapai/bioverse"}, {"uid": "github/warrickball/tomso", "html_url": "https://rseng.github.io/software/repository/github/warrickball/tomso", "api_url": "https://rseng.github.io/software/api/repos/github/warrickball/tomso"}, {"uid": "github/mudit-jain90/i-SPin", "html_url": "https://rseng.github.io/software/repository/github/mudit-jain90/i-SPin", "api_url": "https://rseng.github.io/software/api/repos/github/mudit-jain90/i-SPin"}, {"uid": "github/sfschen/velocileptors", "html_url": "https://rseng.github.io/software/repository/github/sfschen/velocileptors", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/velocileptors"}, {"uid": "github/sfschen/spinosaurus", "html_url": "https://rseng.github.io/software/repository/github/sfschen/spinosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/spinosaurus"}, {"uid": "github/HEAP-EXPOSOME/metagenomics-ML", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/metagenomics-ML"}, {"uid": "github/HEAP-EXPOSOME/biopipe", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/biopipe", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/biopipe"}, {"uid": "github/HEAP-EXPOSOME/ConsumerData", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/ConsumerData", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/ConsumerData"}, {"uid": "github/HEAP-EXPOSOME/streaming-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/streaming-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/streaming-demo"}, {"uid": "github/HEAP-EXPOSOME/exposome-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/exposome-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/exposome-demo"}, {"uid": "github/HEAP-EXPOSOME/hopsworks-chef", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks-chef"}, {"uid": "github/HEAP-EXPOSOME/KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/KITE"}, {"uid": "github/HEAP-EXPOSOME/HPV-KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-KITE"}, {"uid": "github/HEAP-EXPOSOME/HPV-meta", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-meta", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-meta"}, {"uid": "github/HEAP-EXPOSOME/hopsworks", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks"}, {"uid": "github/desResLab/LINFA", "html_url": "https://rseng.github.io/software/repository/github/desResLab/LINFA", "api_url": "https://rseng.github.io/software/api/repos/github/desResLab/LINFA"}, {"uid": "github/CNuge/BOLD-CLI", "html_url": "https://rseng.github.io/software/repository/github/CNuge/BOLD-CLI", "api_url": "https://rseng.github.io/software/api/repos/github/CNuge/BOLD-CLI"}, {"uid": "github/oxpig/ImmuneBuilder", "html_url": "https://rseng.github.io/software/repository/github/oxpig/ImmuneBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/oxpig/ImmuneBuilder"}, {"uid": "github/SYalouz/QuantNBody", "html_url": "https://rseng.github.io/software/repository/github/SYalouz/QuantNBody", "api_url": "https://rseng.github.io/software/api/repos/github/SYalouz/QuantNBody"}, {"uid": "github/shaelebrown/TDApplied", "html_url": "https://rseng.github.io/software/repository/github/shaelebrown/TDApplied", "api_url": "https://rseng.github.io/software/api/repos/github/shaelebrown/TDApplied"}, {"uid": "github/upb-lea/gym-electric-motor", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/gym-electric-motor", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/gym-electric-motor"}, {"uid": "github/upb-lea/ElectricGrid.jl", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/ElectricGrid.jl", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/ElectricGrid.jl"}, {"uid": "github/upb-lea/openmodelica-microgrid-gym", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/openmodelica-microgrid-gym", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/openmodelica-microgrid-gym"}, {"uid": "github/gumilevskij/Framework", "html_url": "https://rseng.github.io/software/repository/github/gumilevskij/Framework", "api_url": "https://rseng.github.io/software/api/repos/github/gumilevskij/Framework"}, {"uid": "github/3top1a/biotools-linter", "html_url": "https://rseng.github.io/software/repository/github/3top1a/biotools-linter", "api_url": "https://rseng.github.io/software/api/repos/github/3top1a/biotools-linter"}, {"uid": "github/joefarrington/mdpax", "html_url": "https://rseng.github.io/software/repository/github/joefarrington/mdpax", "api_url": "https://rseng.github.io/software/api/repos/github/joefarrington/mdpax"}, {"uid": "github/lrnv/Copulas.jl", "html_url": "https://rseng.github.io/software/repository/github/lrnv/Copulas.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/Copulas.jl"}, {"uid": "github/lrnv/cort", "html_url": "https://rseng.github.io/software/repository/github/lrnv/cort", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/cort"}, {"uid": "github/SNOwGLoBES/snowglobes", "html_url": "https://rseng.github.io/software/repository/github/SNOwGLoBES/snowglobes", "api_url": "https://rseng.github.io/software/api/repos/github/SNOwGLoBES/snowglobes"}, {"uid": "github/calebclass/Shiny-NanoTube", "html_url": "https://rseng.github.io/software/repository/github/calebclass/Shiny-NanoTube", "api_url": "https://rseng.github.io/software/api/repos/github/calebclass/Shiny-NanoTube"}, {"uid": "github/Toloka/crowd-kit", "html_url": "https://rseng.github.io/software/repository/github/Toloka/crowd-kit", "api_url": "https://rseng.github.io/software/api/repos/github/Toloka/crowd-kit"}, {"uid": "github/mberto79/XCALibre.jl", "html_url": "https://rseng.github.io/software/repository/github/mberto79/XCALibre.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mberto79/XCALibre.jl"}, {"uid": "github/flosalbizziae/kataegis", "html_url": "https://rseng.github.io/software/repository/github/flosalbizziae/kataegis", "api_url": "https://rseng.github.io/software/api/repos/github/flosalbizziae/kataegis"}, {"uid": "github/dynamicslab/pysindy", "html_url": "https://rseng.github.io/software/repository/github/dynamicslab/pysindy", "api_url": "https://rseng.github.io/software/api/repos/github/dynamicslab/pysindy"}, {"uid": "github/tumcms/Open-Infra-Platform", "html_url": "https://rseng.github.io/software/repository/github/tumcms/Open-Infra-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/tumcms/Open-Infra-Platform"}, {"uid": "github/zd1/telseq", "html_url": "https://rseng.github.io/software/repository/github/zd1/telseq", "api_url": "https://rseng.github.io/software/api/repos/github/zd1/telseq"}, {"uid": "github/renecotyfanboy/jaxspec", "html_url": "https://rseng.github.io/software/repository/github/renecotyfanboy/jaxspec", "api_url": "https://rseng.github.io/software/api/repos/github/renecotyfanboy/jaxspec"}, {"uid": "github/cma2015/iwa-miRNA", "html_url": "https://rseng.github.io/software/repository/github/cma2015/iwa-miRNA", "api_url": "https://rseng.github.io/software/api/repos/github/cma2015/iwa-miRNA"}, {"uid": "github/halomod/hmf", "html_url": "https://rseng.github.io/software/repository/github/halomod/hmf", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/hmf"}, {"uid": "github/halomod/halomod", "html_url": "https://rseng.github.io/software/repository/github/halomod/halomod", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/halomod"}, {"uid": "github/thejasvibr/bat_beamshapes", "html_url": "https://rseng.github.io/software/repository/github/thejasvibr/bat_beamshapes", "api_url": "https://rseng.github.io/software/api/repos/github/thejasvibr/bat_beamshapes"}, {"uid": "github/astrogilda/mirkwood", "html_url": "https://rseng.github.io/software/repository/github/astrogilda/mirkwood", "api_url": "https://rseng.github.io/software/api/repos/github/astrogilda/mirkwood"}, {"uid": "github/alerpaschoal/CODARFE", "html_url": "https://rseng.github.io/software/repository/github/alerpaschoal/CODARFE", "api_url": "https://rseng.github.io/software/api/repos/github/alerpaschoal/CODARFE"}, {"uid": "github/mdsteiner/EFAtools", "html_url": "https://rseng.github.io/software/repository/github/mdsteiner/EFAtools", "api_url": "https://rseng.github.io/software/api/repos/github/mdsteiner/EFAtools"}, {"uid": "github/niess/calzone", "html_url": "https://rseng.github.io/software/repository/github/niess/calzone", "api_url": "https://rseng.github.io/software/api/repos/github/niess/calzone"}, {"uid": "github/HARMONI-ELT/HSIM", "html_url": "https://rseng.github.io/software/repository/github/HARMONI-ELT/HSIM", "api_url": "https://rseng.github.io/software/api/repos/github/HARMONI-ELT/HSIM"}, {"uid": "github/paucablop/chemotools", "html_url": "https://rseng.github.io/software/repository/github/paucablop/chemotools", "api_url": "https://rseng.github.io/software/api/repos/github/paucablop/chemotools"}, {"uid": "github/JieweiHuang/Coport", "html_url": "https://rseng.github.io/software/repository/github/JieweiHuang/Coport", "api_url": "https://rseng.github.io/software/api/repos/github/JieweiHuang/Coport"}, {"uid": "github/mrbell/fsclean", "html_url": "https://rseng.github.io/software/repository/github/mrbell/fsclean", "api_url": "https://rseng.github.io/software/api/repos/github/mrbell/fsclean"}, {"uid": "github/getzlab/rnaseqc", "html_url": "https://rseng.github.io/software/repository/github/getzlab/rnaseqc", "api_url": "https://rseng.github.io/software/api/repos/github/getzlab/rnaseqc"}, {"uid": "github/ggmichael/craterstats", "html_url": "https://rseng.github.io/software/repository/github/ggmichael/craterstats", "api_url": "https://rseng.github.io/software/api/repos/github/ggmichael/craterstats"}, {"uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP"}, {"uid": "github/ELELAB/cancermuts", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/cancermuts", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/cancermuts"}, {"uid": "github/ELELAB/LipidDyn", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/LipidDyn", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/LipidDyn"}, {"uid": "github/ELELAB/RosettaDDGPrediction", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/RosettaDDGPrediction", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/RosettaDDGPrediction"}, {"uid": "github/MolMeDB/MolMeDB", "html_url": "https://rseng.github.io/software/repository/github/MolMeDB/MolMeDB", "api_url": "https://rseng.github.io/software/api/repos/github/MolMeDB/MolMeDB"}, {"uid": "github/WMD-group/StarryNight", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/StarryNight", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/StarryNight"}, {"uid": "github/WMD-group/Eris", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/Eris", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/Eris"}, {"uid": "github/WMD-group/SMACT", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/SMACT", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/SMACT"}, {"uid": "github/WMD-group/MacroDensity", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/MacroDensity", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/MacroDensity"}, {"uid": "github/WMD-group/hybrid-perovskites", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/hybrid-perovskites", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/hybrid-perovskites"}, {"uid": "github/WMD-group/CarrierCapture.jl", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/CarrierCapture.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/CarrierCapture.jl"}, {"uid": "github/Clinical-Genomics-Umea/fraggler", "html_url": "https://rseng.github.io/software/repository/github/Clinical-Genomics-Umea/fraggler", "api_url": "https://rseng.github.io/software/api/repos/github/Clinical-Genomics-Umea/fraggler"}, {"uid": "github/bfarr/exocartographer", "html_url": "https://rseng.github.io/software/repository/github/bfarr/exocartographer", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/exocartographer"}, {"uid": "github/bfarr/kombine", "html_url": "https://rseng.github.io/software/repository/github/bfarr/kombine", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/kombine"}, {"uid": "github/agreenbaum/ImPlaneIA", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/ImPlaneIA", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/ImPlaneIA"}, {"uid": "github/agreenbaum/gsgs", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/gsgs", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/gsgs"}, {"uid": "github/antismash/antismash", "html_url": "https://rseng.github.io/software/repository/github/antismash/antismash", "api_url": "https://rseng.github.io/software/api/repos/github/antismash/antismash"}, {"uid": "github/migp11/pyfastcore", "html_url": "https://rseng.github.io/software/repository/github/migp11/pyfastcore", "api_url": "https://rseng.github.io/software/api/repos/github/migp11/pyfastcore"}, {"uid": "github/soleneulmer/bem", "html_url": "https://rseng.github.io/software/repository/github/soleneulmer/bem", "api_url": "https://rseng.github.io/software/api/repos/github/soleneulmer/bem"}, {"uid": "github/SCM-NV/qmflows", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows"}, {"uid": "github/SCM-NV/pyZacros", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/pyZacros", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/pyZacros"}, {"uid": "github/SCM-NV/qmflows-namd", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows-namd", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows-namd"}, {"uid": "github/WBK-Robotics/pybullet_industrial", "html_url": "https://rseng.github.io/software/repository/github/WBK-Robotics/pybullet_industrial", "api_url": "https://rseng.github.io/software/api/repos/github/WBK-Robotics/pybullet_industrial"}, {"uid": "github/DS4Ag/dpest", "html_url": "https://rseng.github.io/software/repository/github/DS4Ag/dpest", "api_url": "https://rseng.github.io/software/api/repos/github/DS4Ag/dpest"}, {"uid": "github/ulilautenschlager/crimp", "html_url": "https://rseng.github.io/software/repository/github/ulilautenschlager/crimp", "api_url": "https://rseng.github.io/software/api/repos/github/ulilautenschlager/crimp"}, {"uid": "github/fruzsinaagocs/oscode", "html_url": "https://rseng.github.io/software/repository/github/fruzsinaagocs/oscode", "api_url": "https://rseng.github.io/software/api/repos/github/fruzsinaagocs/oscode"}, {"uid": "github/souradipp76/MM-PoE", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/MM-PoE", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/MM-PoE"}, {"uid": "github/souradipp76/ReadMeReady", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/ReadMeReady", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/ReadMeReady"}, {"uid": "github/mawenlong2016/DeepAnnotation", "html_url": "https://rseng.github.io/software/repository/github/mawenlong2016/DeepAnnotation", "api_url": "https://rseng.github.io/software/api/repos/github/mawenlong2016/DeepAnnotation"}, {"uid": "github/bezuidenhoutmc/SeeKAT", "html_url": "https://rseng.github.io/software/repository/github/bezuidenhoutmc/SeeKAT", "api_url": "https://rseng.github.io/software/api/repos/github/bezuidenhoutmc/SeeKAT"}, {"uid": "github/HinLeung622/pipes_vis", "html_url": "https://rseng.github.io/software/repository/github/HinLeung622/pipes_vis", "api_url": "https://rseng.github.io/software/api/repos/github/HinLeung622/pipes_vis"}, {"uid": "github/wangchao-malab/DeepAc4C", "html_url": "https://rseng.github.io/software/repository/github/wangchao-malab/DeepAc4C", "api_url": "https://rseng.github.io/software/api/repos/github/wangchao-malab/DeepAc4C"}, {"uid": "github/JulienPeloton/s4cmb", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/s4cmb", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/s4cmb"}, {"uid": "github/JulienPeloton/lenscov", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/lenscov", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/lenscov"}, {"uid": "github/ExoArcturus/TriArc", "html_url": "https://rseng.github.io/software/repository/github/ExoArcturus/TriArc", "api_url": "https://rseng.github.io/software/api/repos/github/ExoArcturus/TriArc"}, {"uid": "github/lwang-astro/SDAR", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/SDAR", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/SDAR"}, {"uid": "github/lwang-astro/PeTar", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/PeTar", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/PeTar"}, {"uid": "github/statgen/demuxlet", "html_url": "https://rseng.github.io/software/repository/github/statgen/demuxlet", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/demuxlet"}, {"uid": "github/statgen/popscle", "html_url": "https://rseng.github.io/software/repository/github/statgen/popscle", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/popscle"}, {"uid": "github/statgen/Minimac4", "html_url": "https://rseng.github.io/software/repository/github/statgen/Minimac4", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/Minimac4"}, {"uid": "github/MREYE-LUMC/ZOSPy", "html_url": "https://rseng.github.io/software/repository/github/MREYE-LUMC/ZOSPy", "api_url": "https://rseng.github.io/software/api/repos/github/MREYE-LUMC/ZOSPy"}, {"uid": "github/etiennepayet/nti", "html_url": "https://rseng.github.io/software/repository/github/etiennepayet/nti", "api_url": "https://rseng.github.io/software/api/repos/github/etiennepayet/nti"}, {"uid": "github/kusmic/pycosie", "html_url": "https://rseng.github.io/software/repository/github/kusmic/pycosie", "api_url": "https://rseng.github.io/software/api/repos/github/kusmic/pycosie"}, {"uid": "github/skiehl/wwz", "html_url": "https://rseng.github.io/software/repository/github/skiehl/wwz", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/wwz"}, {"uid": "github/skiehl/polarizationtools", "html_url": "https://rseng.github.io/software/repository/github/skiehl/polarizationtools", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/polarizationtools"}, {"uid": "github/skiehl/lcsim", "html_url": "https://rseng.github.io/software/repository/github/skiehl/lcsim", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/lcsim"}, {"uid": "github/florisvb/PyNumDiff", "html_url": "https://rseng.github.io/software/repository/github/florisvb/PyNumDiff", "api_url": "https://rseng.github.io/software/api/repos/github/florisvb/PyNumDiff"}, {"uid": "github/sjvrijn/mf2", "html_url": "https://rseng.github.io/software/repository/github/sjvrijn/mf2", "api_url": "https://rseng.github.io/software/api/repos/github/sjvrijn/mf2"}, {"uid": "github/Wimmics/olivaw", "html_url": "https://rseng.github.io/software/repository/github/Wimmics/olivaw", "api_url": "https://rseng.github.io/software/api/repos/github/Wimmics/olivaw"}, {"uid": "github/GabrieleParimbelli/COLIBRI", "html_url": "https://rseng.github.io/software/repository/github/GabrieleParimbelli/COLIBRI", "api_url": "https://rseng.github.io/software/api/repos/github/GabrieleParimbelli/COLIBRI"}, {"uid": "github/gerlero/foamlib", "html_url": "https://rseng.github.io/software/repository/github/gerlero/foamlib", "api_url": "https://rseng.github.io/software/api/repos/github/gerlero/foamlib"}, {"uid": "github/scottleedavis/googleearthtoolbox", "html_url": "https://rseng.github.io/software/repository/github/scottleedavis/googleearthtoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/scottleedavis/googleearthtoolbox"}, {"uid": "github/bihealth/sodar_core", "html_url": "https://rseng.github.io/software/repository/github/bihealth/sodar_core", "api_url": "https://rseng.github.io/software/api/repos/github/bihealth/sodar_core"}, {"uid": "github/mpiersonsmela/SeqVerify", "html_url": "https://rseng.github.io/software/repository/github/mpiersonsmela/SeqVerify", "api_url": "https://rseng.github.io/software/api/repos/github/mpiersonsmela/SeqVerify"}, {"uid": "github/EHTJulia/ScatteringOptics.jl", "html_url": "https://rseng.github.io/software/repository/github/EHTJulia/ScatteringOptics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EHTJulia/ScatteringOptics.jl"}, {"uid": "github/rajewsky-lab/spacemake", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/spacemake", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/spacemake"}, {"uid": "github/rajewsky-lab/dropbead", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/dropbead", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/dropbead"}, {"uid": "github/rajewsky-lab/novosparc", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/novosparc", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/novosparc"}, {"uid": "github/r3w0p/bobocep", "html_url": "https://rseng.github.io/software/repository/github/r3w0p/bobocep", "api_url": "https://rseng.github.io/software/api/repos/github/r3w0p/bobocep"}, {"uid": "github/rbrthogan/GAz", "html_url": "https://rseng.github.io/software/repository/github/rbrthogan/GAz", "api_url": "https://rseng.github.io/software/api/repos/github/rbrthogan/GAz"}, {"uid": "github/Kamuish/archi", "html_url": "https://rseng.github.io/software/repository/github/Kamuish/archi", "api_url": "https://rseng.github.io/software/api/repos/github/Kamuish/archi"}, {"uid": "github/andersdot/photoParallax", "html_url": "https://rseng.github.io/software/repository/github/andersdot/photoParallax", "api_url": "https://rseng.github.io/software/api/repos/github/andersdot/photoParallax"}, {"uid": "github/rezeebe/orbitN", "html_url": "https://rseng.github.io/software/repository/github/rezeebe/orbitN", "api_url": "https://rseng.github.io/software/api/repos/github/rezeebe/orbitN"}, {"uid": "github/PieterjanRobbe/GaussianRandomFields.jl", "html_url": "https://rseng.github.io/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PieterjanRobbe/GaussianRandomFields.jl"}, {"uid": "github/dirostri/CREPE", "html_url": "https://rseng.github.io/software/repository/github/dirostri/CREPE", "api_url": "https://rseng.github.io/software/api/repos/github/dirostri/CREPE"}, {"uid": "github/heli-xu/findSVI", "html_url": "https://rseng.github.io/software/repository/github/heli-xu/findSVI", "api_url": "https://rseng.github.io/software/api/repos/github/heli-xu/findSVI"}, {"uid": "github/agnesbrnb/MetIDfyR", "html_url": "https://rseng.github.io/software/repository/github/agnesbrnb/MetIDfyR", "api_url": "https://rseng.github.io/software/api/repos/github/agnesbrnb/MetIDfyR"}, {"uid": "github/anuradhawick/LRBinner", "html_url": "https://rseng.github.io/software/repository/github/anuradhawick/LRBinner", "api_url": "https://rseng.github.io/software/api/repos/github/anuradhawick/LRBinner"}, {"uid": "github/sparks-baird/xtal2png", "html_url": "https://rseng.github.io/software/repository/github/sparks-baird/xtal2png", "api_url": "https://rseng.github.io/software/api/repos/github/sparks-baird/xtal2png"}, {"uid": "github/pymedphys/pymedphys", "html_url": "https://rseng.github.io/software/repository/github/pymedphys/pymedphys", "api_url": "https://rseng.github.io/software/api/repos/github/pymedphys/pymedphys"}, {"uid": "github/alawryaguila/multi-view-AE", "html_url": "https://rseng.github.io/software/repository/github/alawryaguila/multi-view-AE", "api_url": "https://rseng.github.io/software/api/repos/github/alawryaguila/multi-view-AE"}, {"uid": "github/chenwuperth/rgz_rcnn", "html_url": "https://rseng.github.io/software/repository/github/chenwuperth/rgz_rcnn", "api_url": "https://rseng.github.io/software/api/repos/github/chenwuperth/rgz_rcnn"}, {"uid": "github/davideamato/NAPLES", "html_url": "https://rseng.github.io/software/repository/github/davideamato/NAPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davideamato/NAPLES"}, {"uid": "github/perfanalytics/pose2sim", "html_url": "https://rseng.github.io/software/repository/github/perfanalytics/pose2sim", "api_url": "https://rseng.github.io/software/api/repos/github/perfanalytics/pose2sim"}, {"uid": "github/nf-core/viralrecon", "html_url": "https://rseng.github.io/software/repository/github/nf-core/viralrecon", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/viralrecon"}, {"uid": "github/nf-core/sarek", "html_url": "https://rseng.github.io/software/repository/github/nf-core/sarek", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/sarek"}, {"uid": "github/nf-core/proteinfamilies", "html_url": "https://rseng.github.io/software/repository/github/nf-core/proteinfamilies", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/proteinfamilies"}, {"uid": "github/nf-core/airrflow", "html_url": "https://rseng.github.io/software/repository/github/nf-core/airrflow", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/airrflow"}, {"uid": "github/nf-core/mag", "html_url": "https://rseng.github.io/software/repository/github/nf-core/mag", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/mag"}, {"uid": "github/muLAn-project/muLAn", "html_url": "https://rseng.github.io/software/repository/github/muLAn-project/muLAn", "api_url": "https://rseng.github.io/software/api/repos/github/muLAn-project/muLAn"}, {"uid": "github/UoMMIB/TFBMiner", "html_url": "https://rseng.github.io/software/repository/github/UoMMIB/TFBMiner", "api_url": "https://rseng.github.io/software/api/repos/github/UoMMIB/TFBMiner"}, {"uid": "github/nickrodd/HDMSpectra", "html_url": "https://rseng.github.io/software/repository/github/nickrodd/HDMSpectra", "api_url": "https://rseng.github.io/software/api/repos/github/nickrodd/HDMSpectra"}, {"uid": "github/vgl-hub/gfastats", "html_url": "https://rseng.github.io/software/repository/github/vgl-hub/gfastats", "api_url": "https://rseng.github.io/software/api/repos/github/vgl-hub/gfastats"}, {"uid": "github/wlloyduw/ContainerProfiler", "html_url": "https://rseng.github.io/software/repository/github/wlloyduw/ContainerProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/wlloyduw/ContainerProfiler"}, {"uid": "github/mp3guy/ElasticFusion", "html_url": "https://rseng.github.io/software/repository/github/mp3guy/ElasticFusion", "api_url": "https://rseng.github.io/software/api/repos/github/mp3guy/ElasticFusion"}, {"uid": "github/rhayes777/PyAutoFit", "html_url": "https://rseng.github.io/software/repository/github/rhayes777/PyAutoFit", "api_url": "https://rseng.github.io/software/api/repos/github/rhayes777/PyAutoFit"}, {"uid": "github/iraf-community/pyraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/pyraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/pyraf"}, {"uid": "github/iraf-community/iraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/iraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/iraf"}, {"uid": "github/TeamPerie/CellDestiny", "html_url": "https://rseng.github.io/software/repository/github/TeamPerie/CellDestiny", "api_url": "https://rseng.github.io/software/api/repos/github/TeamPerie/CellDestiny"}, {"uid": "github/kkrismer/scansite4", "html_url": "https://rseng.github.io/software/repository/github/kkrismer/scansite4", "api_url": "https://rseng.github.io/software/api/repos/github/kkrismer/scansite4"}, {"uid": "github/AndreaCaldiroli/ATES-Code", "html_url": "https://rseng.github.io/software/repository/github/AndreaCaldiroli/ATES-Code", "api_url": "https://rseng.github.io/software/api/repos/github/AndreaCaldiroli/ATES-Code"}, {"uid": "github/alejandroaviles/fkpt", "html_url": "https://rseng.github.io/software/repository/github/alejandroaviles/fkpt", "api_url": "https://rseng.github.io/software/api/repos/github/alejandroaviles/fkpt"}, {"uid": "github/alicia-ziying-yang/conTEXT-explorer", "html_url": "https://rseng.github.io/software/repository/github/alicia-ziying-yang/conTEXT-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/alicia-ziying-yang/conTEXT-explorer"}, {"uid": "github/mikekatz04/BOWIE", "html_url": "https://rseng.github.io/software/repository/github/mikekatz04/BOWIE", "api_url": "https://rseng.github.io/software/api/repos/github/mikekatz04/BOWIE"}, {"uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "html_url": "https://rseng.github.io/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "api_url": "https://rseng.github.io/software/api/repos/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022"}, {"uid": "github/matthiasdemuzere/w2w", "html_url": "https://rseng.github.io/software/repository/github/matthiasdemuzere/w2w", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasdemuzere/w2w"}, {"uid": "github/radio-astro-tools/pvextractor", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/pvextractor", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/pvextractor"}, {"uid": "github/radio-astro-tools/spectral-cube", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/spectral-cube", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/spectral-cube"}, {"uid": "github/radio-astro-tools/uvcombine", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/uvcombine", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/uvcombine"}, {"uid": "github/BiostatOmics/MORE", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/MORE", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/MORE"}, {"uid": "github/BiostatOmics/Coxmos", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/Coxmos", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/Coxmos"}, {"uid": "github/sheneman/clearcut", "html_url": "https://rseng.github.io/software/repository/github/sheneman/clearcut", "api_url": "https://rseng.github.io/software/api/repos/github/sheneman/clearcut"}, {"uid": "github/aqlaboratory/openfold", "html_url": "https://rseng.github.io/software/repository/github/aqlaboratory/openfold", "api_url": "https://rseng.github.io/software/api/repos/github/aqlaboratory/openfold"}, {"uid": "github/RadioAstronomySoftwareGroup/pyradiosky", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyradiosky"}, {"uid": "github/RadioAstronomySoftwareGroup/pyuvdata", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyuvdata"}, {"uid": "github/fbreitwieser/krakenuniq", "html_url": "https://rseng.github.io/software/repository/github/fbreitwieser/krakenuniq", "api_url": "https://rseng.github.io/software/api/repos/github/fbreitwieser/krakenuniq"}, {"uid": "github/Chroma-CITI/namosim", "html_url": "https://rseng.github.io/software/repository/github/Chroma-CITI/namosim", "api_url": "https://rseng.github.io/software/api/repos/github/Chroma-CITI/namosim"}, {"uid": "github/ldliao/jointVIP", "html_url": "https://rseng.github.io/software/repository/github/ldliao/jointVIP", "api_url": "https://rseng.github.io/software/api/repos/github/ldliao/jointVIP"}, {"uid": "github/computproteomics/PolySTest", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/PolySTest", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/PolySTest"}, {"uid": "github/computproteomics/ProteoMaker", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/ProteoMaker", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/ProteoMaker"}, {"uid": "github/computproteomics/OmicsQ", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/OmicsQ", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/OmicsQ"}, {"uid": "github/jcolinhill/pyilc", "html_url": "https://rseng.github.io/software/repository/github/jcolinhill/pyilc", "api_url": "https://rseng.github.io/software/api/repos/github/jcolinhill/pyilc"}, {"uid": "github/TingMAC/FrMLNet", "html_url": "https://rseng.github.io/software/repository/github/TingMAC/FrMLNet", "api_url": "https://rseng.github.io/software/api/repos/github/TingMAC/FrMLNet"}, {"uid": "github/austinpeel/herculens", "html_url": "https://rseng.github.io/software/repository/github/austinpeel/herculens", "api_url": "https://rseng.github.io/software/api/repos/github/austinpeel/herculens"}, {"uid": "github/AnitaPetzler/AMOEBA", "html_url": "https://rseng.github.io/software/repository/github/AnitaPetzler/AMOEBA", "api_url": "https://rseng.github.io/software/api/repos/github/AnitaPetzler/AMOEBA"}, {"uid": "github/JuliaQX/QXTools.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQX/QXTools.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQX/QXTools.jl"}, {"uid": "github/PyPSA/atlite", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/atlite", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/atlite"}, {"uid": "github/PyPSA/linopy", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/linopy", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/linopy"}, {"uid": "github/Shamir-Lab/domino_web", "html_url": "https://rseng.github.io/software/repository/github/Shamir-Lab/domino_web", "api_url": "https://rseng.github.io/software/api/repos/github/Shamir-Lab/domino_web"}, {"uid": "github/cespinosa/pyHIIexplorerV2", "html_url": "https://rseng.github.io/software/repository/github/cespinosa/pyHIIexplorerV2", "api_url": "https://rseng.github.io/software/api/repos/github/cespinosa/pyHIIexplorerV2"}, {"uid": "github/m-shahbaz-kharal/LiGuard-JOSS", "html_url": "https://rseng.github.io/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", "api_url": "https://rseng.github.io/software/api/repos/github/m-shahbaz-kharal/LiGuard-JOSS"}, {"uid": "github/pni-lab/mlconfound", "html_url": "https://rseng.github.io/software/repository/github/pni-lab/mlconfound", "api_url": "https://rseng.github.io/software/api/repos/github/pni-lab/mlconfound"}, {"uid": "github/mavrix93/LightCurvesClassifier", "html_url": "https://rseng.github.io/software/repository/github/mavrix93/LightCurvesClassifier", "api_url": "https://rseng.github.io/software/api/repos/github/mavrix93/LightCurvesClassifier"}, {"uid": "github/AliYoussef96/parazitCUB", "html_url": "https://rseng.github.io/software/repository/github/AliYoussef96/parazitCUB", "api_url": "https://rseng.github.io/software/api/repos/github/AliYoussef96/parazitCUB"}, {"uid": "github/TomWagg/cogsworth", "html_url": "https://rseng.github.io/software/repository/github/TomWagg/cogsworth", "api_url": "https://rseng.github.io/software/api/repos/github/TomWagg/cogsworth"}, {"uid": "github/mriener/gausspyplus", "html_url": "https://rseng.github.io/software/repository/github/mriener/gausspyplus", "api_url": "https://rseng.github.io/software/api/repos/github/mriener/gausspyplus"}, {"uid": "github/bionlplab/GlaucomaNet", "html_url": "https://rseng.github.io/software/repository/github/bionlplab/GlaucomaNet", "api_url": "https://rseng.github.io/software/api/repos/github/bionlplab/GlaucomaNet"}, {"uid": "github/Aminsinichi/wearable-hrv", "html_url": "https://rseng.github.io/software/repository/github/Aminsinichi/wearable-hrv", "api_url": "https://rseng.github.io/software/api/repos/github/Aminsinichi/wearable-hrv"}, {"uid": "github/OFFIS-DAI/Mango.jl", "html_url": "https://rseng.github.io/software/repository/github/OFFIS-DAI/Mango.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OFFIS-DAI/Mango.jl"}, {"uid": "github/hfarias/mask_galaxy", "html_url": "https://rseng.github.io/software/repository/github/hfarias/mask_galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/hfarias/mask_galaxy"}, {"uid": "github/Jinsl-lab/SDImpute", "html_url": "https://rseng.github.io/software/repository/github/Jinsl-lab/SDImpute", "api_url": "https://rseng.github.io/software/api/repos/github/Jinsl-lab/SDImpute"}, {"uid": "github/rae-holcomb/SpinSpotter", "html_url": "https://rseng.github.io/software/repository/github/rae-holcomb/SpinSpotter", "api_url": "https://rseng.github.io/software/api/repos/github/rae-holcomb/SpinSpotter"}, {"uid": "github/CEMeNT-PSAAP/MCDC", "html_url": "https://rseng.github.io/software/repository/github/CEMeNT-PSAAP/MCDC", "api_url": "https://rseng.github.io/software/api/repos/github/CEMeNT-PSAAP/MCDC"}, {"uid": "github/brunettsp/myosothes", "html_url": "https://rseng.github.io/software/repository/github/brunettsp/myosothes", "api_url": "https://rseng.github.io/software/api/repos/github/brunettsp/myosothes"}, {"uid": "github/esa/NIDN", "html_url": "https://rseng.github.io/software/repository/github/esa/NIDN", "api_url": "https://rseng.github.io/software/api/repos/github/esa/NIDN"}, {"uid": "github/esa/pagmo2-paper", "html_url": "https://rseng.github.io/software/repository/github/esa/pagmo2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/esa/pagmo2-paper"}, {"uid": "github/esa/polyhedral-gravity-model", "html_url": "https://rseng.github.io/software/repository/github/esa/polyhedral-gravity-model", "api_url": "https://rseng.github.io/software/api/repos/github/esa/polyhedral-gravity-model"}, {"uid": "github/patkel/big-macs-calibrate", "html_url": "https://rseng.github.io/software/repository/github/patkel/big-macs-calibrate", "api_url": "https://rseng.github.io/software/api/repos/github/patkel/big-macs-calibrate"}, {"uid": "github/tldr-group/samba-web", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/samba-web", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/samba-web"}, {"uid": "github/tldr-group/taufactor", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/taufactor", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/taufactor"}, {"uid": "github/deepmedic/deepmedic", "html_url": "https://rseng.github.io/software/repository/github/deepmedic/deepmedic", "api_url": "https://rseng.github.io/software/api/repos/github/deepmedic/deepmedic"}, {"uid": "github/GrainLearning/grainLearning", "html_url": "https://rseng.github.io/software/repository/github/GrainLearning/grainLearning", "api_url": "https://rseng.github.io/software/api/repos/github/GrainLearning/grainLearning"}, {"uid": "github/elsner/arkcos", "html_url": "https://rseng.github.io/software/repository/github/elsner/arkcos", "api_url": "https://rseng.github.io/software/api/repos/github/elsner/arkcos"}, {"uid": "github/wuzhenao/CPPLS-MLP", "html_url": "https://rseng.github.io/software/repository/github/wuzhenao/CPPLS-MLP", "api_url": "https://rseng.github.io/software/api/repos/github/wuzhenao/CPPLS-MLP"}, {"uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "html_url": "https://rseng.github.io/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "api_url": "https://rseng.github.io/software/api/repos/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys"}, {"uid": "github/GRTLCollaboration/GRTresna", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRTresna", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRTresna"}, {"uid": "github/GRTLCollaboration/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRFolres"}, {"uid": "github/GRTLCollaboration/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRChombo"}, {"uid": "github/GRTLCollaboration/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRDzhadzha"}, {"uid": "github/QingyuLiaib/PLA-MoRe", "html_url": "https://rseng.github.io/software/repository/github/QingyuLiaib/PLA-MoRe", "api_url": "https://rseng.github.io/software/api/repos/github/QingyuLiaib/PLA-MoRe"}, {"uid": "github/smsharma/fermi-gce-flows", "html_url": "https://rseng.github.io/software/repository/github/smsharma/fermi-gce-flows", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/fermi-gce-flows"}, {"uid": "github/smsharma/dark-photons-perturbations", "html_url": "https://rseng.github.io/software/repository/github/smsharma/dark-photons-perturbations", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/dark-photons-perturbations"}, {"uid": "github/smsharma/mining-for-substructure-lens", "html_url": "https://rseng.github.io/software/repository/github/smsharma/mining-for-substructure-lens", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/mining-for-substructure-lens"}, {"uid": "github/ruizengalways/FOD-Net", "html_url": "https://rseng.github.io/software/repository/github/ruizengalways/FOD-Net", "api_url": "https://rseng.github.io/software/api/repos/github/ruizengalways/FOD-Net"}, {"uid": "github/remi-adam/minot", "html_url": "https://rseng.github.io/software/repository/github/remi-adam/minot", "api_url": "https://rseng.github.io/software/api/repos/github/remi-adam/minot"}, {"uid": "github/pkestene/xsmurf", "html_url": "https://rseng.github.io/software/repository/github/pkestene/xsmurf", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/xsmurf"}, {"uid": "github/pkestene/ramsesGPU", "html_url": "https://rseng.github.io/software/repository/github/pkestene/ramsesGPU", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/ramsesGPU"}, {"uid": "github/AstrobioMike/GToTree", "html_url": "https://rseng.github.io/software/repository/github/AstrobioMike/GToTree", "api_url": "https://rseng.github.io/software/api/repos/github/AstrobioMike/GToTree"}, {"uid": "github/rohinkumar/correlcalc", "html_url": "https://rseng.github.io/software/repository/github/rohinkumar/correlcalc", "api_url": "https://rseng.github.io/software/api/repos/github/rohinkumar/correlcalc"}, {"uid": "github/HaowenZhang/TRINITY", "html_url": "https://rseng.github.io/software/repository/github/HaowenZhang/TRINITY", "api_url": "https://rseng.github.io/software/api/repos/github/HaowenZhang/TRINITY"}, {"uid": "github/BEAST-Fitting/beast", "html_url": "https://rseng.github.io/software/repository/github/BEAST-Fitting/beast", "api_url": "https://rseng.github.io/software/api/repos/github/BEAST-Fitting/beast"}, {"uid": "github/918particle/AskaryanModule", "html_url": "https://rseng.github.io/software/repository/github/918particle/AskaryanModule", "api_url": "https://rseng.github.io/software/api/repos/github/918particle/AskaryanModule"}, {"uid": "github/matiscke/lcps", "html_url": "https://rseng.github.io/software/repository/github/matiscke/lcps", "api_url": "https://rseng.github.io/software/api/repos/github/matiscke/lcps"}, {"uid": "github/editeodoro/Bbarolo", "html_url": "https://rseng.github.io/software/repository/github/editeodoro/Bbarolo", "api_url": "https://rseng.github.io/software/api/repos/github/editeodoro/Bbarolo"}, {"uid": "github/wmalab/EnHiC", "html_url": "https://rseng.github.io/software/repository/github/wmalab/EnHiC", "api_url": "https://rseng.github.io/software/api/repos/github/wmalab/EnHiC"}, {"uid": "github/TheFischerLab/FLEXR", "html_url": "https://rseng.github.io/software/repository/github/TheFischerLab/FLEXR", "api_url": "https://rseng.github.io/software/api/repos/github/TheFischerLab/FLEXR"}, {"uid": "github/rhenanbartels/hrv", "html_url": "https://rseng.github.io/software/repository/github/rhenanbartels/hrv", "api_url": "https://rseng.github.io/software/api/repos/github/rhenanbartels/hrv"}, {"uid": "github/tbronzwaer/raptor", "html_url": "https://rseng.github.io/software/repository/github/tbronzwaer/raptor", "api_url": "https://rseng.github.io/software/api/repos/github/tbronzwaer/raptor"}, {"uid": "github/pilon/wiki", "html_url": "https://rseng.github.io/software/repository/github/pilon/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/pilon/wiki"}, {"uid": "github/assumpcaothiago/NRPyElliptic", "html_url": "https://rseng.github.io/software/repository/github/assumpcaothiago/NRPyElliptic", "api_url": "https://rseng.github.io/software/api/repos/github/assumpcaothiago/NRPyElliptic"}, {"uid": "github/morisUtokyo/uTR", "html_url": "https://rseng.github.io/software/repository/github/morisUtokyo/uTR", "api_url": "https://rseng.github.io/software/api/repos/github/morisUtokyo/uTR"}, {"uid": "github/koustavchandra/gwforge", "html_url": "https://rseng.github.io/software/repository/github/koustavchandra/gwforge", "api_url": "https://rseng.github.io/software/api/repos/github/koustavchandra/gwforge"}, {"uid": "github/SwiftVISA/SwiftVISASwift", "html_url": "https://rseng.github.io/software/repository/github/SwiftVISA/SwiftVISASwift", "api_url": "https://rseng.github.io/software/api/repos/github/SwiftVISA/SwiftVISASwift"}, {"uid": "github/kokron/anzu", "html_url": "https://rseng.github.io/software/repository/github/kokron/anzu", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/anzu"}, {"uid": "github/kokron/skyLine", "html_url": "https://rseng.github.io/software/repository/github/kokron/skyLine", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/skyLine"}, {"uid": "github/esilver01/small-lens-forecast-sims", "html_url": "https://rseng.github.io/software/repository/github/esilver01/small-lens-forecast-sims", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/small-lens-forecast-sims"}, {"uid": "github/esilver01/resnet-model-training", "html_url": "https://rseng.github.io/software/repository/github/esilver01/resnet-model-training", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/resnet-model-training"}, {"uid": "github/NRDD-constraints/NRDD", "html_url": "https://rseng.github.io/software/repository/github/NRDD-constraints/NRDD", "api_url": "https://rseng.github.io/software/api/repos/github/NRDD-constraints/NRDD"}, {"uid": "github/EdanRein/pyPplusS", "html_url": "https://rseng.github.io/software/repository/github/EdanRein/pyPplusS", "api_url": "https://rseng.github.io/software/api/repos/github/EdanRein/pyPplusS"}, {"uid": "github/furrer-lab/abn", "html_url": "https://rseng.github.io/software/repository/github/furrer-lab/abn", "api_url": "https://rseng.github.io/software/api/repos/github/furrer-lab/abn"}, {"uid": "github/teuben/QAC", "html_url": "https://rseng.github.io/software/repository/github/teuben/QAC", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/QAC"}, {"uid": "github/teuben/DataComb", "html_url": "https://rseng.github.io/software/repository/github/teuben/DataComb", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/DataComb"}, {"uid": "github/teuben/nemo", "html_url": "https://rseng.github.io/software/repository/github/teuben/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/nemo"}, {"uid": "github/scikit-hep/vector", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/vector", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/vector"}, {"uid": "github/scikit-hep/iminuit", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/iminuit", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/iminuit"}, {"uid": "github/scikit-hep/pyhf", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/pyhf", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/pyhf"}, {"uid": "github/mms-fcul/PypKa", "html_url": "https://rseng.github.io/software/repository/github/mms-fcul/PypKa", "api_url": "https://rseng.github.io/software/api/repos/github/mms-fcul/PypKa"}, {"uid": "github/martinsparre/XSHPipelineManager", "html_url": "https://rseng.github.io/software/repository/github/martinsparre/XSHPipelineManager", "api_url": "https://rseng.github.io/software/api/repos/github/martinsparre/XSHPipelineManager"}, {"uid": "github/AlanRace/imzMLConverter", "html_url": "https://rseng.github.io/software/repository/github/AlanRace/imzMLConverter", "api_url": "https://rseng.github.io/software/api/repos/github/AlanRace/imzMLConverter"}, {"uid": "github/haimengzhao/magic-microlensing", "html_url": "https://rseng.github.io/software/repository/github/haimengzhao/magic-microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/haimengzhao/magic-microlensing"}, {"uid": "github/duducosmos/pycosmicstar", "html_url": "https://rseng.github.io/software/repository/github/duducosmos/pycosmicstar", "api_url": "https://rseng.github.io/software/api/repos/github/duducosmos/pycosmicstar"}, {"uid": "github/dunnkers/fseval", "html_url": "https://rseng.github.io/software/repository/github/dunnkers/fseval", "api_url": "https://rseng.github.io/software/api/repos/github/dunnkers/fseval"}, {"uid": "github/JuliaHelmecke/MetaboMAPS", "html_url": "https://rseng.github.io/software/repository/github/JuliaHelmecke/MetaboMAPS", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHelmecke/MetaboMAPS"}, {"uid": "github/aamedinburgh/igmtransmission", "html_url": "https://rseng.github.io/software/repository/github/aamedinburgh/igmtransmission", "api_url": "https://rseng.github.io/software/api/repos/github/aamedinburgh/igmtransmission"}, {"uid": "github/snugel/cas-offinder", "html_url": "https://rseng.github.io/software/repository/github/snugel/cas-offinder", "api_url": "https://rseng.github.io/software/api/repos/github/snugel/cas-offinder"}, {"uid": "github/tlancian/bio_cs", "html_url": "https://rseng.github.io/software/repository/github/tlancian/bio_cs", "api_url": "https://rseng.github.io/software/api/repos/github/tlancian/bio_cs"}, {"uid": "github/nhcrisp/ADBSat", "html_url": "https://rseng.github.io/software/repository/github/nhcrisp/ADBSat", "api_url": "https://rseng.github.io/software/api/repos/github/nhcrisp/ADBSat"}, {"uid": "github/4pisky/fourpisky-core", "html_url": "https://rseng.github.io/software/repository/github/4pisky/fourpisky-core", "api_url": "https://rseng.github.io/software/api/repos/github/4pisky/fourpisky-core"}, {"uid": "github/CosmoTool/ECLIPSE", "html_url": "https://rseng.github.io/software/repository/github/CosmoTool/ECLIPSE", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoTool/ECLIPSE"}, {"uid": "github/sverhoeven/docker-cartodb", "html_url": "https://rseng.github.io/software/repository/github/sverhoeven/docker-cartodb", "api_url": "https://rseng.github.io/software/api/repos/github/sverhoeven/docker-cartodb"}, {"uid": "github/rizkg/BBHash", "html_url": "https://rseng.github.io/software/repository/github/rizkg/BBHash", "api_url": "https://rseng.github.io/software/api/repos/github/rizkg/BBHash"}, {"uid": "github/KenethGarcia/ClassiPyGRB", "html_url": "https://rseng.github.io/software/repository/github/KenethGarcia/ClassiPyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/KenethGarcia/ClassiPyGRB"}, {"uid": "github/PEREGRINE-GW/peregrine", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/peregrine", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/peregrine"}, {"uid": "github/PEREGRINE-GW/saqqara", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/saqqara", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/saqqara"}, {"uid": "github/TransDecoder/wiki", "html_url": "https://rseng.github.io/software/repository/github/TransDecoder/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/TransDecoder/wiki"}, {"uid": "github/JuliaGeometry/DelaunayTriangulation.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeometry/DelaunayTriangulation.jl"}, {"uid": "github/GoekeLab/xpore", "html_url": "https://rseng.github.io/software/repository/github/GoekeLab/xpore", "api_url": "https://rseng.github.io/software/api/repos/github/GoekeLab/xpore"}, {"uid": "github/ndaniel/fusioncatcher", "html_url": "https://rseng.github.io/software/repository/github/ndaniel/fusioncatcher", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniel/fusioncatcher"}, {"uid": "github/Krona/wiki", "html_url": "https://rseng.github.io/software/repository/github/Krona/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/Krona/wiki"}, {"uid": "github/skovaka/UNCALLED", "html_url": "https://rseng.github.io/software/repository/github/skovaka/UNCALLED", "api_url": "https://rseng.github.io/software/api/repos/github/skovaka/UNCALLED"}, {"uid": "github/fuyw-aisw/GALA", "html_url": "https://rseng.github.io/software/repository/github/fuyw-aisw/GALA", "api_url": "https://rseng.github.io/software/api/repos/github/fuyw-aisw/GALA"}, {"uid": "github/geoelements/gns", "html_url": "https://rseng.github.io/software/repository/github/geoelements/gns", "api_url": "https://rseng.github.io/software/api/repos/github/geoelements/gns"}, {"uid": "github/RuiningZHAO/wcpy", "html_url": "https://rseng.github.io/software/repository/github/RuiningZHAO/wcpy", "api_url": "https://rseng.github.io/software/api/repos/github/RuiningZHAO/wcpy"}, {"uid": "github/jonas/tig", "html_url": "https://rseng.github.io/software/repository/github/jonas/tig", "api_url": "https://rseng.github.io/software/api/repos/github/jonas/tig"}, {"uid": "github/cameron314/concurrentqueue", "html_url": "https://rseng.github.io/software/repository/github/cameron314/concurrentqueue", "api_url": "https://rseng.github.io/software/api/repos/github/cameron314/concurrentqueue"}, {"uid": "github/mlpack/mlpack", "html_url": "https://rseng.github.io/software/repository/github/mlpack/mlpack", "api_url": "https://rseng.github.io/software/api/repos/github/mlpack/mlpack"}, {"uid": "github/labgem/PPanGGOLiN", "html_url": "https://rseng.github.io/software/repository/github/labgem/PPanGGOLiN", "api_url": "https://rseng.github.io/software/api/repos/github/labgem/PPanGGOLiN"}, {"uid": "github/esteinig/nanoq", "html_url": "https://rseng.github.io/software/repository/github/esteinig/nanoq", "api_url": "https://rseng.github.io/software/api/repos/github/esteinig/nanoq"}, {"uid": "github/rickhelmus/patRoon", "html_url": "https://rseng.github.io/software/repository/github/rickhelmus/patRoon", "api_url": "https://rseng.github.io/software/api/repos/github/rickhelmus/patRoon"}, {"uid": "github/Tomoaki-Ishiyama/mpi-rockstar", "html_url": "https://rseng.github.io/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", "api_url": "https://rseng.github.io/software/api/repos/github/Tomoaki-Ishiyama/mpi-rockstar"}, {"uid": "github/bertrandplez/Turbospectrum_NLTE", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum_NLTE", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum_NLTE"}, {"uid": "github/bertrandplez/Turbospectrum2019", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum2019", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum2019"}, {"uid": "github/ladsantos/p-winds", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/p-winds", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/p-winds"}, {"uid": "github/ladsantos/flatstar", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/flatstar", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/flatstar"}, {"uid": "github/bodenlab/GRASP", "html_url": "https://rseng.github.io/software/repository/github/bodenlab/GRASP", "api_url": "https://rseng.github.io/software/api/repos/github/bodenlab/GRASP"}, {"uid": "github/DRMacIver/shrinkray", "html_url": "https://rseng.github.io/software/repository/github/DRMacIver/shrinkray", "api_url": "https://rseng.github.io/software/api/repos/github/DRMacIver/shrinkray"}, {"uid": "github/astrocatalogs/astrocats", "html_url": "https://rseng.github.io/software/repository/github/astrocatalogs/astrocats", "api_url": "https://rseng.github.io/software/api/repos/github/astrocatalogs/astrocats"}, {"uid": "github/kgullikson88/Companion-Finder", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Companion-Finder", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Companion-Finder"}, {"uid": "github/kgullikson88/Telluric-Fitter", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Telluric-Fitter", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Telluric-Fitter"}, {"uid": "github/ACTCollaboration/zCluster", "html_url": "https://rseng.github.io/software/repository/github/ACTCollaboration/zCluster", "api_url": "https://rseng.github.io/software/api/repos/github/ACTCollaboration/zCluster"}, {"uid": "github/fAndreuzzi/BisPy", "html_url": "https://rseng.github.io/software/repository/github/fAndreuzzi/BisPy", "api_url": "https://rseng.github.io/software/api/repos/github/fAndreuzzi/BisPy"}, {"uid": "github/SatelliteShorelines/CoastSeg", "html_url": "https://rseng.github.io/software/repository/github/SatelliteShorelines/CoastSeg", "api_url": "https://rseng.github.io/software/api/repos/github/SatelliteShorelines/CoastSeg"}, {"uid": "github/AMReX-Astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Nyx"}, {"uid": "github/AMReX-Astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Castro"}, {"uid": "github/AMReX-Astro/MAESTROeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/MAESTROeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/MAESTROeX"}, {"uid": "github/AMReX-Astro/wdmerger", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/wdmerger", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/wdmerger"}, {"uid": "github/cds-astro/mocpy", "html_url": "https://rseng.github.io/software/repository/github/cds-astro/mocpy", "api_url": "https://rseng.github.io/software/api/repos/github/cds-astro/mocpy"}, {"uid": "github/YSOVAR/YSOVAR", "html_url": "https://rseng.github.io/software/repository/github/YSOVAR/YSOVAR", "api_url": "https://rseng.github.io/software/api/repos/github/YSOVAR/YSOVAR"}, {"uid": "github/baker-laboratory/RoseTTAFold-All-Atom", "html_url": "https://rseng.github.io/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", "api_url": "https://rseng.github.io/software/api/repos/github/baker-laboratory/RoseTTAFold-All-Atom"}, {"uid": "github/villrv/SuperRAENN", "html_url": "https://rseng.github.io/software/repository/github/villrv/SuperRAENN", "api_url": "https://rseng.github.io/software/api/repos/github/villrv/SuperRAENN"}, {"uid": "github/msaland/THInCR-Suite", "html_url": "https://rseng.github.io/software/repository/github/msaland/THInCR-Suite", "api_url": "https://rseng.github.io/software/api/repos/github/msaland/THInCR-Suite"}, {"uid": "github/MADHATdm/MADHAT", "html_url": "https://rseng.github.io/software/repository/github/MADHATdm/MADHAT", "api_url": "https://rseng.github.io/software/api/repos/github/MADHATdm/MADHAT"}, {"uid": "github/odelaneau/shapeit4", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit4", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit4"}, {"uid": "github/odelaneau/GLIMPSE", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/GLIMPSE", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/GLIMPSE"}, {"uid": "github/odelaneau/shapeit5", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit5", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit5"}, {"uid": "github/amanchokshi/EMBERS", "html_url": "https://rseng.github.io/software/repository/github/amanchokshi/EMBERS", "api_url": "https://rseng.github.io/software/api/repos/github/amanchokshi/EMBERS"}, {"uid": "github/wfondrie/mokapot", "html_url": "https://rseng.github.io/software/repository/github/wfondrie/mokapot", "api_url": "https://rseng.github.io/software/api/repos/github/wfondrie/mokapot"}, {"uid": "github/JIBSIL/DistriFS", "html_url": "https://rseng.github.io/software/repository/github/JIBSIL/DistriFS", "api_url": "https://rseng.github.io/software/api/repos/github/JIBSIL/DistriFS"}, {"uid": "github/LucIJspeert/star_shadow", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/star_shadow", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/star_shadow"}, {"uid": "github/LucIJspeert/eclipsr", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/eclipsr", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/eclipsr"}, {"uid": "github/pyro-ppl/numpyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/numpyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/numpyro"}, {"uid": "github/pyro-ppl/pyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/pyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/pyro"}, {"uid": "github/Multiscale-Genomics/VRE", "html_url": "https://rseng.github.io/software/repository/github/Multiscale-Genomics/VRE", "api_url": "https://rseng.github.io/software/api/repos/github/Multiscale-Genomics/VRE"}, {"uid": "github/micahvista/MAMnet", "html_url": "https://rseng.github.io/software/repository/github/micahvista/MAMnet", "api_url": "https://rseng.github.io/software/api/repos/github/micahvista/MAMnet"}, {"uid": "github/AKHughes1994/polkat", "html_url": "https://rseng.github.io/software/repository/github/AKHughes1994/polkat", "api_url": "https://rseng.github.io/software/api/repos/github/AKHughes1994/polkat"}, {"uid": "github/villano-lab/nrCascadeSim", "html_url": "https://rseng.github.io/software/repository/github/villano-lab/nrCascadeSim", "api_url": "https://rseng.github.io/software/api/repos/github/villano-lab/nrCascadeSim"}, {"uid": "github/nwchemgit/nwchem", "html_url": "https://rseng.github.io/software/repository/github/nwchemgit/nwchem", "api_url": "https://rseng.github.io/software/api/repos/github/nwchemgit/nwchem"}, {"uid": "github/Ge-Lab/USAT", "html_url": "https://rseng.github.io/software/repository/github/Ge-Lab/USAT", "api_url": "https://rseng.github.io/software/api/repos/github/Ge-Lab/USAT"}, {"uid": "github/signaturescience/skater", "html_url": "https://rseng.github.io/software/repository/github/signaturescience/skater", "api_url": "https://rseng.github.io/software/api/repos/github/signaturescience/skater"}, {"uid": "github/dixonlab/hic_breakfinder", "html_url": "https://rseng.github.io/software/repository/github/dixonlab/hic_breakfinder", "api_url": "https://rseng.github.io/software/api/repos/github/dixonlab/hic_breakfinder"}, {"uid": "github/bancaditalia/black-it", "html_url": "https://rseng.github.io/software/repository/github/bancaditalia/black-it", "api_url": "https://rseng.github.io/software/api/repos/github/bancaditalia/black-it"}, {"uid": "github/wangbingjie/sbi_pp", "html_url": "https://rseng.github.io/software/repository/github/wangbingjie/sbi_pp", "api_url": "https://rseng.github.io/software/api/repos/github/wangbingjie/sbi_pp"}, {"uid": "github/candebellavita/vkompth", "html_url": "https://rseng.github.io/software/repository/github/candebellavita/vkompth", "api_url": "https://rseng.github.io/software/api/repos/github/candebellavita/vkompth"}, {"uid": "github/rodluger/Limbdark.jl", "html_url": "https://rseng.github.io/software/repository/github/rodluger/Limbdark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/Limbdark.jl"}, {"uid": "github/rodluger/planetplanet", "html_url": "https://rseng.github.io/software/repository/github/rodluger/planetplanet", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/planetplanet"}, {"uid": "github/rodluger/everest", "html_url": "https://rseng.github.io/software/repository/github/rodluger/everest", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/everest"}, {"uid": "github/rodluger/starry_process", "html_url": "https://rseng.github.io/software/repository/github/rodluger/starry_process", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/starry_process"}, {"uid": "github/wf4ever/astrotaverna", "html_url": "https://rseng.github.io/software/repository/github/wf4ever/astrotaverna", "api_url": "https://rseng.github.io/software/api/repos/github/wf4ever/astrotaverna"}, {"uid": "github/gperezs/StarcNet", "html_url": "https://rseng.github.io/software/repository/github/gperezs/StarcNet", "api_url": "https://rseng.github.io/software/api/repos/github/gperezs/StarcNet"}, {"uid": "github/nmfs-fish-tools/ssmse", "html_url": "https://rseng.github.io/software/repository/github/nmfs-fish-tools/ssmse", "api_url": "https://rseng.github.io/software/api/repos/github/nmfs-fish-tools/ssmse"}, {"uid": "github/theia-dev/Qiber3D", "html_url": "https://rseng.github.io/software/repository/github/theia-dev/Qiber3D", "api_url": "https://rseng.github.io/software/api/repos/github/theia-dev/Qiber3D"}, {"uid": "github/UtrechtUniversity/raster_extraction", "html_url": "https://rseng.github.io/software/repository/github/UtrechtUniversity/raster_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/UtrechtUniversity/raster_extraction"}, {"uid": "github/IFB-ElixirFr/edam-browser", "html_url": "https://rseng.github.io/software/repository/github/IFB-ElixirFr/edam-browser", "api_url": "https://rseng.github.io/software/api/repos/github/IFB-ElixirFr/edam-browser"}, {"uid": "github/ddarriba/prottest3", "html_url": "https://rseng.github.io/software/repository/github/ddarriba/prottest3", "api_url": "https://rseng.github.io/software/api/repos/github/ddarriba/prottest3"}, {"uid": "github/ejhigson/dyPolyChord", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/dyPolyChord", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/dyPolyChord"}, {"uid": "github/ejhigson/perfectns", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/perfectns", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/perfectns"}, {"uid": "github/ejhigson/nestcheck", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/nestcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/nestcheck"}, {"uid": "github/RafiKueng/SpaghettiLens", "html_url": "https://rseng.github.io/software/repository/github/RafiKueng/SpaghettiLens", "api_url": "https://rseng.github.io/software/api/repos/github/RafiKueng/SpaghettiLens"}, {"uid": "github/undark-lab/albatross", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/albatross", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/albatross"}, {"uid": "github/undark-lab/swyft", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/swyft", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/swyft"}, {"uid": "github/undark-lab/sstrax", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/sstrax", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/sstrax"}, {"uid": "github/a-renzini/pygwb", "html_url": "https://rseng.github.io/software/repository/github/a-renzini/pygwb", "api_url": "https://rseng.github.io/software/api/repos/github/a-renzini/pygwb"}, {"uid": "github/taranu/AllStarFit", "html_url": "https://rseng.github.io/software/repository/github/taranu/AllStarFit", "api_url": "https://rseng.github.io/software/api/repos/github/taranu/AllStarFit"}, {"uid": "github/wangsiwei2010/FPMVS-CAG", "html_url": "https://rseng.github.io/software/repository/github/wangsiwei2010/FPMVS-CAG", "api_url": "https://rseng.github.io/software/api/repos/github/wangsiwei2010/FPMVS-CAG"}, {"uid": "github/ucsbdeepspace/tripp_pipeline", "html_url": "https://rseng.github.io/software/repository/github/ucsbdeepspace/tripp_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ucsbdeepspace/tripp_pipeline"}, {"uid": "github/TRACER-LULab/Hyperelastics.jl", "html_url": "https://rseng.github.io/software/repository/github/TRACER-LULab/Hyperelastics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TRACER-LULab/Hyperelastics.jl"}, {"uid": "github/clauswilke/PeptideBuilder", "html_url": "https://rseng.github.io/software/repository/github/clauswilke/PeptideBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/clauswilke/PeptideBuilder"}, {"uid": "github/wullm/fastdf", "html_url": "https://rseng.github.io/software/repository/github/wullm/fastdf", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/fastdf"}, {"uid": "github/wullm/zwindstroom", "html_url": "https://rseng.github.io/software/repository/github/wullm/zwindstroom", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/zwindstroom"}, {"uid": "github/PDB-REDO/cif-tools", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/cif-tools", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/cif-tools"}, {"uid": "github/PDB-REDO/libcifpp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libcifpp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libcifpp"}, {"uid": "github/PDB-REDO/libpdb-redo", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libpdb-redo", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libpdb-redo"}, {"uid": "github/PDB-REDO/density-fitness", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/density-fitness", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/density-fitness"}, {"uid": "github/PDB-REDO/tortoize", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/tortoize", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/tortoize"}, {"uid": "github/PDB-REDO/dssp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/dssp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/dssp"}, {"uid": "github/OP2/PyOP2", "html_url": "https://rseng.github.io/software/repository/github/OP2/PyOP2", "api_url": "https://rseng.github.io/software/api/repos/github/OP2/PyOP2"}, {"uid": "github/NLeSC-GO-common-infrastructure/marzipan", "html_url": "https://rseng.github.io/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC-GO-common-infrastructure/marzipan"}, {"uid": "github/JunTaoLuo/mctreesearch4j", "html_url": "https://rseng.github.io/software/repository/github/JunTaoLuo/mctreesearch4j", "api_url": "https://rseng.github.io/software/api/repos/github/JunTaoLuo/mctreesearch4j"}, {"uid": "github/InsightSoftwareConsortium/ITK", "html_url": "https://rseng.github.io/software/repository/github/InsightSoftwareConsortium/ITK", "api_url": "https://rseng.github.io/software/api/repos/github/InsightSoftwareConsortium/ITK"}, {"uid": "github/akleroy/phangs_imaging_scripts", "html_url": "https://rseng.github.io/software/repository/github/akleroy/phangs_imaging_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/akleroy/phangs_imaging_scripts"}, {"uid": "github/SterlingYM/astroPIPS", "html_url": "https://rseng.github.io/software/repository/github/SterlingYM/astroPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/SterlingYM/astroPIPS"}, {"uid": "github/moeyensj/atm", "html_url": "https://rseng.github.io/software/repository/github/moeyensj/atm", "api_url": "https://rseng.github.io/software/api/repos/github/moeyensj/atm"}, {"uid": "github/SDXorg/pysd", "html_url": "https://rseng.github.io/software/repository/github/SDXorg/pysd", "api_url": "https://rseng.github.io/software/api/repos/github/SDXorg/pysd"}, {"uid": "github/adrientaudiere/MiscMetabar", "html_url": "https://rseng.github.io/software/repository/github/adrientaudiere/MiscMetabar", "api_url": "https://rseng.github.io/software/api/repos/github/adrientaudiere/MiscMetabar"}, {"uid": "github/solids4foam/solids4foam", "html_url": "https://rseng.github.io/software/repository/github/solids4foam/solids4foam", "api_url": "https://rseng.github.io/software/api/repos/github/solids4foam/solids4foam"}, {"uid": "github/pmvreeswijk/ZOGY", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/ZOGY", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/ZOGY"}, {"uid": "github/pmvreeswijk/BlackBOX", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/BlackBOX", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/BlackBOX"}, {"uid": "github/DavidRConnell/matlab-igraph", "html_url": "https://rseng.github.io/software/repository/github/DavidRConnell/matlab-igraph", "api_url": "https://rseng.github.io/software/api/repos/github/DavidRConnell/matlab-igraph"}, {"uid": "github/aritraghsh09/GaMorNet", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMorNet", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMorNet"}, {"uid": "github/aritraghsh09/GaMPEN", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMPEN", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMPEN"}, {"uid": "github/devitocodes/pyrevolve", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/pyrevolve", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/pyrevolve"}, {"uid": "github/devitocodes/devito", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/devito", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/devito"}, {"uid": "github/lorenaacuna/GASTLI", "html_url": "https://rseng.github.io/software/repository/github/lorenaacuna/GASTLI", "api_url": "https://rseng.github.io/software/api/repos/github/lorenaacuna/GASTLI"}, {"uid": "github/RangamaniLabUCSD/smart", "html_url": "https://rseng.github.io/software/repository/github/RangamaniLabUCSD/smart", "api_url": "https://rseng.github.io/software/api/repos/github/RangamaniLabUCSD/smart"}, {"uid": "github/abacusorg/zeldovich-PLT", "html_url": "https://rseng.github.io/software/repository/github/abacusorg/zeldovich-PLT", "api_url": "https://rseng.github.io/software/api/repos/github/abacusorg/zeldovich-PLT"}, {"uid": "github/flyaflya/causact", "html_url": "https://rseng.github.io/software/repository/github/flyaflya/causact", "api_url": "https://rseng.github.io/software/api/repos/github/flyaflya/causact"}, {"uid": "github/ramadatta/CPgeneProfiler", "html_url": "https://rseng.github.io/software/repository/github/ramadatta/CPgeneProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/ramadatta/CPgeneProfiler"}, {"uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "html_url": "https://rseng.github.io/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "api_url": "https://rseng.github.io/software/api/repos/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier"}, {"uid": "github/samwaseda/mamonca", "html_url": "https://rseng.github.io/software/repository/github/samwaseda/mamonca", "api_url": "https://rseng.github.io/software/api/repos/github/samwaseda/mamonca"}, {"uid": "github/nextflow-io/nextflow", "html_url": "https://rseng.github.io/software/repository/github/nextflow-io/nextflow", "api_url": "https://rseng.github.io/software/api/repos/github/nextflow-io/nextflow"}, {"uid": "github/RongquanWang/ELF-DPC", "html_url": "https://rseng.github.io/software/repository/github/RongquanWang/ELF-DPC", "api_url": "https://rseng.github.io/software/api/repos/github/RongquanWang/ELF-DPC"}, {"uid": "github/odb9402/CNNPeaks", "html_url": "https://rseng.github.io/software/repository/github/odb9402/CNNPeaks", "api_url": "https://rseng.github.io/software/api/repos/github/odb9402/CNNPeaks"}, {"uid": "github/milkschen/leviosam2", "html_url": "https://rseng.github.io/software/repository/github/milkschen/leviosam2", "api_url": "https://rseng.github.io/software/api/repos/github/milkschen/leviosam2"}, {"uid": "github/JKoblitz/DSMZCellDive", "html_url": "https://rseng.github.io/software/repository/github/JKoblitz/DSMZCellDive", "api_url": "https://rseng.github.io/software/api/repos/github/JKoblitz/DSMZCellDive"}, {"uid": "github/awsteiner/bamr", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/bamr", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/bamr"}, {"uid": "github/awsteiner/o2scl", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/o2scl", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/o2scl"}, {"uid": "github/ybillchen/particle_spray", "html_url": "https://rseng.github.io/software/repository/github/ybillchen/particle_spray", "api_url": "https://rseng.github.io/software/api/repos/github/ybillchen/particle_spray"}, {"uid": "github/Adamtaranto/mimeo", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/mimeo", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/mimeo"}, {"uid": "github/Adamtaranto/Yanagiba", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/Yanagiba", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/Yanagiba"}, {"uid": "github/gramos/imagetooth", "html_url": "https://rseng.github.io/software/repository/github/gramos/imagetooth", "api_url": "https://rseng.github.io/software/api/repos/github/gramos/imagetooth"}, {"uid": "github/alejandrobll/py-sphviewer", "html_url": "https://rseng.github.io/software/repository/github/alejandrobll/py-sphviewer", "api_url": "https://rseng.github.io/software/api/repos/github/alejandrobll/py-sphviewer"}, {"uid": "github/oleksulkowski/Syn-CpG-Spacer", "html_url": "https://rseng.github.io/software/repository/github/oleksulkowski/Syn-CpG-Spacer", "api_url": "https://rseng.github.io/software/api/repos/github/oleksulkowski/Syn-CpG-Spacer"}, {"uid": "github/lberaldoesilva/tropygal", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/tropygal", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/tropygal"}, {"uid": "github/lberaldoesilva/naif", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/naif", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/naif"}, {"uid": "github/curl/curl", "html_url": "https://rseng.github.io/software/repository/github/curl/curl", "api_url": "https://rseng.github.io/software/api/repos/github/curl/curl"}, {"uid": "github/tuoyl/tat-pulsar", "html_url": "https://rseng.github.io/software/repository/github/tuoyl/tat-pulsar", "api_url": "https://rseng.github.io/software/api/repos/github/tuoyl/tat-pulsar"}, {"uid": "github/tylunel/pvpumpingsystem", "html_url": "https://rseng.github.io/software/repository/github/tylunel/pvpumpingsystem", "api_url": "https://rseng.github.io/software/api/repos/github/tylunel/pvpumpingsystem"}, {"uid": "github/jeffzhen/omnical", "html_url": "https://rseng.github.io/software/repository/github/jeffzhen/omnical", "api_url": "https://rseng.github.io/software/api/repos/github/jeffzhen/omnical"}, {"uid": "github/freemed/freeshim", "html_url": "https://rseng.github.io/software/repository/github/freemed/freeshim", "api_url": "https://rseng.github.io/software/api/repos/github/freemed/freeshim"}, {"uid": "github/vbakis/mrs", "html_url": "https://rseng.github.io/software/repository/github/vbakis/mrs", "api_url": "https://rseng.github.io/software/api/repos/github/vbakis/mrs"}, {"uid": "github/gt1/bambamc", "html_url": "https://rseng.github.io/software/repository/github/gt1/bambamc", "api_url": "https://rseng.github.io/software/api/repos/github/gt1/bambamc"}, {"uid": "github/CGATOxford/UMI-tools", "html_url": "https://rseng.github.io/software/repository/github/CGATOxford/UMI-tools", "api_url": "https://rseng.github.io/software/api/repos/github/CGATOxford/UMI-tools"}, {"uid": "github/Nextomics/NextDenovo", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/NextDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/NextDenovo"}, {"uid": "github/Nextomics/nextsv", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/nextsv", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/nextsv"}, {"uid": "github/XGI-MSU/WDMWaveletTransforms", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/WDMWaveletTransforms", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/WDMWaveletTransforms"}, {"uid": "github/XGI-MSU/PyIMRPhenomD", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/PyIMRPhenomD", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/PyIMRPhenomD"}, {"uid": "github/mkelley/zchecker", "html_url": "https://rseng.github.io/software/repository/github/mkelley/zchecker", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/zchecker"}, {"uid": "github/mkelley/calviacat", "html_url": "https://rseng.github.io/software/repository/github/mkelley/calviacat", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/calviacat"}, {"uid": "github/ViennaRNA/RNAblueprint", "html_url": "https://rseng.github.io/software/repository/github/ViennaRNA/RNAblueprint", "api_url": "https://rseng.github.io/software/api/repos/github/ViennaRNA/RNAblueprint"}, {"uid": "github/opengeos/geoai", "html_url": "https://rseng.github.io/software/repository/github/opengeos/geoai", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/geoai"}, {"uid": "github/opengeos/segment-geospatial", "html_url": "https://rseng.github.io/software/repository/github/opengeos/segment-geospatial", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/segment-geospatial"}, {"uid": "github/opengeos/HyperCoast", "html_url": "https://rseng.github.io/software/repository/github/opengeos/HyperCoast", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/HyperCoast"}, {"uid": "github/chaoliu-cl/textAnnotatoR", "html_url": "https://rseng.github.io/software/repository/github/chaoliu-cl/textAnnotatoR", "api_url": "https://rseng.github.io/software/api/repos/github/chaoliu-cl/textAnnotatoR"}, {"uid": "github/ejmackrell/tidyproteomics-interactive", "html_url": "https://rseng.github.io/software/repository/github/ejmackrell/tidyproteomics-interactive", "api_url": "https://rseng.github.io/software/api/repos/github/ejmackrell/tidyproteomics-interactive"}, {"uid": "github/MJCliffe/PASCal", "html_url": "https://rseng.github.io/software/repository/github/MJCliffe/PASCal", "api_url": "https://rseng.github.io/software/api/repos/github/MJCliffe/PASCal"}, {"uid": "github/edwardoughton/itmlogic", "html_url": "https://rseng.github.io/software/repository/github/edwardoughton/itmlogic", "api_url": "https://rseng.github.io/software/api/repos/github/edwardoughton/itmlogic"}, {"uid": "github/mlujnie/simple", "html_url": "https://rseng.github.io/software/repository/github/mlujnie/simple", "api_url": "https://rseng.github.io/software/api/repos/github/mlujnie/simple"}, {"uid": "github/brainglobe/bg-atlasapi", "html_url": "https://rseng.github.io/software/repository/github/brainglobe/bg-atlasapi", "api_url": "https://rseng.github.io/software/api/repos/github/brainglobe/bg-atlasapi"}, {"uid": "github/fgerick/Limace.jl", "html_url": "https://rseng.github.io/software/repository/github/fgerick/Limace.jl", "api_url": "https://rseng.github.io/software/api/repos/github/fgerick/Limace.jl"}, {"uid": "github/al-mcintyre/mCaller", "html_url": "https://rseng.github.io/software/repository/github/al-mcintyre/mCaller", "api_url": "https://rseng.github.io/software/api/repos/github/al-mcintyre/mCaller"}, {"uid": "github/dmvandamt/beyonce", "html_url": "https://rseng.github.io/software/repository/github/dmvandamt/beyonce", "api_url": "https://rseng.github.io/software/api/repos/github/dmvandamt/beyonce"}, {"uid": "github/COSMIC-PopSynth/COSMIC", "html_url": "https://rseng.github.io/software/repository/github/COSMIC-PopSynth/COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/COSMIC-PopSynth/COSMIC"}, {"uid": "github/natelust/least_asymmetry", "html_url": "https://rseng.github.io/software/repository/github/natelust/least_asymmetry", "api_url": "https://rseng.github.io/software/api/repos/github/natelust/least_asymmetry"}, {"uid": "github/neuroanatomy/reorient", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/reorient", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/reorient"}, {"uid": "github/neuroanatomy/thresholdmann", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/thresholdmann", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/thresholdmann"}, {"uid": "github/koenderks/jaspAudit", "html_url": "https://rseng.github.io/software/repository/github/koenderks/jaspAudit", "api_url": "https://rseng.github.io/software/api/repos/github/koenderks/jaspAudit"}, {"uid": "github/finsberg/gotranx", "html_url": "https://rseng.github.io/software/repository/github/finsberg/gotranx", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/gotranx"}, {"uid": "github/finsberg/fenicsx-beat", "html_url": "https://rseng.github.io/software/repository/github/finsberg/fenicsx-beat", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/fenicsx-beat"}, {"uid": "github/Xia-Yijie/Xponge", "html_url": "https://rseng.github.io/software/repository/github/Xia-Yijie/Xponge", "api_url": "https://rseng.github.io/software/api/repos/github/Xia-Yijie/Xponge"}, {"uid": "github/Junwu302/HiFun", "html_url": "https://rseng.github.io/software/repository/github/Junwu302/HiFun", "api_url": "https://rseng.github.io/software/api/repos/github/Junwu302/HiFun"}, {"uid": "github/SciLifeLab/TIDDIT", "html_url": "https://rseng.github.io/software/repository/github/SciLifeLab/TIDDIT", "api_url": "https://rseng.github.io/software/api/repos/github/SciLifeLab/TIDDIT"}, {"uid": "github/dfguan/purge_dups", "html_url": "https://rseng.github.io/software/repository/github/dfguan/purge_dups", "api_url": "https://rseng.github.io/software/api/repos/github/dfguan/purge_dups"}, {"uid": "github/rhysf/HaplotypeTools", "html_url": "https://rseng.github.io/software/repository/github/rhysf/HaplotypeTools", "api_url": "https://rseng.github.io/software/api/repos/github/rhysf/HaplotypeTools"}, {"uid": "github/c-martinez/BeyondTheBook", "html_url": "https://rseng.github.io/software/repository/github/c-martinez/BeyondTheBook", "api_url": "https://rseng.github.io/software/api/repos/github/c-martinez/BeyondTheBook"}, {"uid": "github/YinanZhao21/SOAP_GPU", "html_url": "https://rseng.github.io/software/repository/github/YinanZhao21/SOAP_GPU", "api_url": "https://rseng.github.io/software/api/repos/github/YinanZhao21/SOAP_GPU"}, {"uid": "github/rajeshrinet/pystokes", "html_url": "https://rseng.github.io/software/repository/github/rajeshrinet/pystokes", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshrinet/pystokes"}, {"uid": "github/nomad-coe/greenX", "html_url": "https://rseng.github.io/software/repository/github/nomad-coe/greenX", "api_url": "https://rseng.github.io/software/api/repos/github/nomad-coe/greenX"}, {"uid": "github/s-abbas/robnptests", "html_url": "https://rseng.github.io/software/repository/github/s-abbas/robnptests", "api_url": "https://rseng.github.io/software/api/repos/github/s-abbas/robnptests"}, {"uid": "github/AemulusProject/bias_emulator", "html_url": "https://rseng.github.io/software/repository/github/AemulusProject/bias_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/AemulusProject/bias_emulator"}, {"uid": "github/e-mental-health/data-processing", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/data-processing", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/data-processing"}, {"uid": "github/e-mental-health/orange-hackathon", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/orange-hackathon", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/orange-hackathon"}, {"uid": "github/TRI-AMDD/GMP-featurizer", "html_url": "https://rseng.github.io/software/repository/github/TRI-AMDD/GMP-featurizer", "api_url": "https://rseng.github.io/software/api/repos/github/TRI-AMDD/GMP-featurizer"}, {"uid": "github/aslan-ng/keepdelta", "html_url": "https://rseng.github.io/software/repository/github/aslan-ng/keepdelta", "api_url": "https://rseng.github.io/software/api/repos/github/aslan-ng/keepdelta"}, {"uid": "github/tiberioap/grav_waldo", "html_url": "https://rseng.github.io/software/repository/github/tiberioap/grav_waldo", "api_url": "https://rseng.github.io/software/api/repos/github/tiberioap/grav_waldo"}, {"uid": "github/ranocha/SummationByPartsOperators.jl", "html_url": "https://rseng.github.io/software/repository/github/ranocha/SummationByPartsOperators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ranocha/SummationByPartsOperators.jl"}, {"uid": "github/danielemichilli/DM_phase", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/DM_phase", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/DM_phase"}, {"uid": "github/danielemichilli/SpS", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/SpS", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/SpS"}, {"uid": "github/cdfortenbach/JET", "html_url": "https://rseng.github.io/software/repository/github/cdfortenbach/JET", "api_url": "https://rseng.github.io/software/api/repos/github/cdfortenbach/JET"}, {"uid": "github/StephenJHardy/SL1M", "html_url": "https://rseng.github.io/software/repository/github/StephenJHardy/SL1M", "api_url": "https://rseng.github.io/software/api/repos/github/StephenJHardy/SL1M"}, {"uid": "github/bsumlin/PyMieScatt", "html_url": "https://rseng.github.io/software/repository/github/bsumlin/PyMieScatt", "api_url": "https://rseng.github.io/software/api/repos/github/bsumlin/PyMieScatt"}, {"uid": "github/equitable-equations/fqar", "html_url": "https://rseng.github.io/software/repository/github/equitable-equations/fqar", "api_url": "https://rseng.github.io/software/api/repos/github/equitable-equations/fqar"}, {"uid": "github/philres/catfishq", "html_url": "https://rseng.github.io/software/repository/github/philres/catfishq", "api_url": "https://rseng.github.io/software/api/repos/github/philres/catfishq"}, {"uid": "github/philres/ngmlr", "html_url": "https://rseng.github.io/software/repository/github/philres/ngmlr", "api_url": "https://rseng.github.io/software/api/repos/github/philres/ngmlr"}, {"uid": "github/liulizhi1996/HPODNets", "html_url": "https://rseng.github.io/software/repository/github/liulizhi1996/HPODNets", "api_url": "https://rseng.github.io/software/api/repos/github/liulizhi1996/HPODNets"}, {"uid": "github/medbioinf/pia", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/pia", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/pia"}, {"uid": "github/medbioinf/macpepdb-frontend", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/macpepdb-frontend", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/macpepdb-frontend"}, {"uid": "github/steven-murray/pydftools", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/pydftools", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/pydftools"}, {"uid": "github/steven-murray/powerbox", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/powerbox", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/powerbox"}, {"uid": "github/steven-murray/mrpy", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/mrpy", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/mrpy"}, {"uid": "github/ExObsSim/ExoRad2-public", "html_url": "https://rseng.github.io/software/repository/github/ExObsSim/ExoRad2-public", "api_url": "https://rseng.github.io/software/api/repos/github/ExObsSim/ExoRad2-public"}, {"uid": "github/OceanGenomics/mudskipper", "html_url": "https://rseng.github.io/software/repository/github/OceanGenomics/mudskipper", "api_url": "https://rseng.github.io/software/api/repos/github/OceanGenomics/mudskipper"}, {"uid": "github/landoskape/syd", "html_url": "https://rseng.github.io/software/repository/github/landoskape/syd", "api_url": "https://rseng.github.io/software/api/repos/github/landoskape/syd"}, {"uid": "github/IonRepo/IonDiff", "html_url": "https://rseng.github.io/software/repository/github/IonRepo/IonDiff", "api_url": "https://rseng.github.io/software/api/repos/github/IonRepo/IonDiff"}, {"uid": "github/padster/pyNeuroTrace", "html_url": "https://rseng.github.io/software/repository/github/padster/pyNeuroTrace", "api_url": "https://rseng.github.io/software/api/repos/github/padster/pyNeuroTrace"}, {"uid": "github/leigh2/cetra", "html_url": "https://rseng.github.io/software/repository/github/leigh2/cetra", "api_url": "https://rseng.github.io/software/api/repos/github/leigh2/cetra"}, {"uid": "github/OpenEnergyPlatform/open-MaStR", "html_url": "https://rseng.github.io/software/repository/github/OpenEnergyPlatform/open-MaStR", "api_url": "https://rseng.github.io/software/api/repos/github/OpenEnergyPlatform/open-MaStR"}, {"uid": "github/toddy15/medicalterms", "html_url": "https://rseng.github.io/software/repository/github/toddy15/medicalterms", "api_url": "https://rseng.github.io/software/api/repos/github/toddy15/medicalterms"}, {"uid": "github/EC-Earth/ece2cmor3", "html_url": "https://rseng.github.io/software/repository/github/EC-Earth/ece2cmor3", "api_url": "https://rseng.github.io/software/api/repos/github/EC-Earth/ece2cmor3"}, {"uid": "github/mgm8/pyngham", "html_url": "https://rseng.github.io/software/repository/github/mgm8/pyngham", "api_url": "https://rseng.github.io/software/api/repos/github/mgm8/pyngham"}, {"uid": "github/LeonSong1995/gsMap", "html_url": "https://rseng.github.io/software/repository/github/LeonSong1995/gsMap", "api_url": "https://rseng.github.io/software/api/repos/github/LeonSong1995/gsMap"}, {"uid": "github/martinghunt/ziplign", "html_url": "https://rseng.github.io/software/repository/github/martinghunt/ziplign", "api_url": "https://rseng.github.io/software/api/repos/github/martinghunt/ziplign"}, {"uid": "github/hcdenbakker/sepia", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/sepia", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/sepia"}, {"uid": "github/hcdenbakker/SalmID", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/SalmID", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/SalmID"}, {"uid": "github/mwvgroup/pwv_kpno", "html_url": "https://rseng.github.io/software/repository/github/mwvgroup/pwv_kpno", "api_url": "https://rseng.github.io/software/api/repos/github/mwvgroup/pwv_kpno"}, {"uid": "github/jorgefz/photoevolver", "html_url": "https://rseng.github.io/software/repository/github/jorgefz/photoevolver", "api_url": "https://rseng.github.io/software/api/repos/github/jorgefz/photoevolver"}, {"uid": "github/sbailey/empca", "html_url": "https://rseng.github.io/software/repository/github/sbailey/empca", "api_url": "https://rseng.github.io/software/api/repos/github/sbailey/empca"}, {"uid": "github/NoahSailer/FishLSS", "html_url": "https://rseng.github.io/software/repository/github/NoahSailer/FishLSS", "api_url": "https://rseng.github.io/software/api/repos/github/NoahSailer/FishLSS"}, {"uid": "github/kushaltirumala/WaldoInSky", "html_url": "https://rseng.github.io/software/repository/github/kushaltirumala/WaldoInSky", "api_url": "https://rseng.github.io/software/api/repos/github/kushaltirumala/WaldoInSky"}, {"uid": "github/sidmohite/nimbus-astro", "html_url": "https://rseng.github.io/software/repository/github/sidmohite/nimbus-astro", "api_url": "https://rseng.github.io/software/api/repos/github/sidmohite/nimbus-astro"}, {"uid": "github/21cmFAST/21cmFAST", "html_url": "https://rseng.github.io/software/repository/github/21cmFAST/21cmFAST", "api_url": "https://rseng.github.io/software/api/repos/github/21cmFAST/21cmFAST"}, {"uid": "github/wouterpeere/GHEtool", "html_url": "https://rseng.github.io/software/repository/github/wouterpeere/GHEtool", "api_url": "https://rseng.github.io/software/api/repos/github/wouterpeere/GHEtool"}, {"uid": "github/WebSky-CITA/XGPaint.jl", "html_url": "https://rseng.github.io/software/repository/github/WebSky-CITA/XGPaint.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WebSky-CITA/XGPaint.jl"}, {"uid": "github/prioritizr/wdpar", "html_url": "https://rseng.github.io/software/repository/github/prioritizr/wdpar", "api_url": "https://rseng.github.io/software/api/repos/github/prioritizr/wdpar"}, {"uid": "github/TNOCS/csWeb", "html_url": "https://rseng.github.io/software/repository/github/TNOCS/csWeb", "api_url": "https://rseng.github.io/software/api/repos/github/TNOCS/csWeb"}, {"uid": "github/gnuradio/gnuradio", "html_url": "https://rseng.github.io/software/repository/github/gnuradio/gnuradio", "api_url": "https://rseng.github.io/software/api/repos/github/gnuradio/gnuradio"}, {"uid": "github/reggiebernardo/PTAfast", "html_url": "https://rseng.github.io/software/repository/github/reggiebernardo/PTAfast", "api_url": "https://rseng.github.io/software/api/repos/github/reggiebernardo/PTAfast"}, {"uid": "github/gully/blase", "html_url": "https://rseng.github.io/software/repository/github/gully/blase", "api_url": "https://rseng.github.io/software/api/repos/github/gully/blase"}, {"uid": "github/AgatheSenellart/MultiVae", "html_url": "https://rseng.github.io/software/repository/github/AgatheSenellart/MultiVae", "api_url": "https://rseng.github.io/software/api/repos/github/AgatheSenellart/MultiVae"}, {"uid": "github/nickk124/RCR", "html_url": "https://rseng.github.io/software/repository/github/nickk124/RCR", "api_url": "https://rseng.github.io/software/api/repos/github/nickk124/RCR"}, {"uid": "github/abs-tudelft/variant-calling-at-scale", "html_url": "https://rseng.github.io/software/repository/github/abs-tudelft/variant-calling-at-scale", "api_url": "https://rseng.github.io/software/api/repos/github/abs-tudelft/variant-calling-at-scale"}, {"uid": "github/torluca/morphofit", "html_url": "https://rseng.github.io/software/repository/github/torluca/morphofit", "api_url": "https://rseng.github.io/software/api/repos/github/torluca/morphofit"}, {"uid": "github/pkugyf/MST", "html_url": "https://rseng.github.io/software/repository/github/pkugyf/MST", "api_url": "https://rseng.github.io/software/api/repos/github/pkugyf/MST"}, {"uid": "github/miracum/ahd2fhir", "html_url": "https://rseng.github.io/software/repository/github/miracum/ahd2fhir", "api_url": "https://rseng.github.io/software/api/repos/github/miracum/ahd2fhir"}, {"uid": "github/mbonav/Exo_DMC", "html_url": "https://rseng.github.io/software/repository/github/mbonav/Exo_DMC", "api_url": "https://rseng.github.io/software/api/repos/github/mbonav/Exo_DMC"}, {"uid": "github/luxsrc/gray", "html_url": "https://rseng.github.io/software/repository/github/luxsrc/gray", "api_url": "https://rseng.github.io/software/api/repos/github/luxsrc/gray"}, {"uid": "github/lanl/CosmicEmu", "html_url": "https://rseng.github.io/software/repository/github/lanl/CosmicEmu", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/CosmicEmu"}, {"uid": "github/lanl/scico", "html_url": "https://rseng.github.io/software/repository/github/lanl/scico", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/scico"}, {"uid": "github/lanl/GLUE", "html_url": "https://rseng.github.io/software/repository/github/lanl/GLUE", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/GLUE"}, {"uid": "github/lanl/PyBNF", "html_url": "https://rseng.github.io/software/repository/github/lanl/PyBNF", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/PyBNF"}, {"uid": "github/lanl/spiner", "html_url": "https://rseng.github.io/software/repository/github/lanl/spiner", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/spiner"}, {"uid": "github/lanl/swiftbat_python", "html_url": "https://rseng.github.io/software/repository/github/lanl/swiftbat_python", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/swiftbat_python"}, {"uid": "github/lanl/singularity-eos", "html_url": "https://rseng.github.io/software/repository/github/lanl/singularity-eos", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/singularity-eos"}, {"uid": "github/tum-esm/pyra", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/pyra", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/pyra"}, {"uid": "github/tum-esm/ivy", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/ivy", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/ivy"}, {"uid": "github/adbar/htmldate", "html_url": "https://rseng.github.io/software/repository/github/adbar/htmldate", "api_url": "https://rseng.github.io/software/api/repos/github/adbar/htmldate"}, {"uid": "github/cajohare/NeutrinoFog", "html_url": "https://rseng.github.io/software/repository/github/cajohare/NeutrinoFog", "api_url": "https://rseng.github.io/software/api/repos/github/cajohare/NeutrinoFog"}, {"uid": "github/yapenzhang/excalibuhr", "html_url": "https://rseng.github.io/software/repository/github/yapenzhang/excalibuhr", "api_url": "https://rseng.github.io/software/api/repos/github/yapenzhang/excalibuhr"}, {"uid": "github/yatisht/usher", "html_url": "https://rseng.github.io/software/repository/github/yatisht/usher", "api_url": "https://rseng.github.io/software/api/repos/github/yatisht/usher"}, {"uid": "github/mrtommyb/ktransit", "html_url": "https://rseng.github.io/software/repository/github/mrtommyb/ktransit", "api_url": "https://rseng.github.io/software/api/repos/github/mrtommyb/ktransit"}, {"uid": "github/willvousden/ptemcee", "html_url": "https://rseng.github.io/software/repository/github/willvousden/ptemcee", "api_url": "https://rseng.github.io/software/api/repos/github/willvousden/ptemcee"}, {"uid": "github/Crompulence/cpl-library", "html_url": "https://rseng.github.io/software/repository/github/Crompulence/cpl-library", "api_url": "https://rseng.github.io/software/api/repos/github/Crompulence/cpl-library"}, {"uid": "github/IftachSadeh/ANNZ", "html_url": "https://rseng.github.io/software/repository/github/IftachSadeh/ANNZ", "api_url": "https://rseng.github.io/software/api/repos/github/IftachSadeh/ANNZ"}, {"uid": "github/LauraHerold/pinc", "html_url": "https://rseng.github.io/software/repository/github/LauraHerold/pinc", "api_url": "https://rseng.github.io/software/api/repos/github/LauraHerold/pinc"}, {"uid": "github/cmayer/BaitFisher-package", "html_url": "https://rseng.github.io/software/repository/github/cmayer/BaitFisher-package", "api_url": "https://rseng.github.io/software/api/repos/github/cmayer/BaitFisher-package"}, {"uid": "github/HCGB-IGTP/spaTyper", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/spaTyper", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/spaTyper"}, {"uid": "github/HCGB-IGTP/XICRA", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/XICRA", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/XICRA"}, {"uid": "github/cog-imperial/suspect", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/suspect", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/suspect"}, {"uid": "github/cog-imperial/galini", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/galini", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/galini"}, {"uid": "github/cog-imperial/GPdoemd", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/GPdoemd", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/GPdoemd"}, {"uid": "github/cog-imperial/entmoot", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/entmoot", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/entmoot"}, {"uid": "github/elizakempton/Exo_Transmit", "html_url": "https://rseng.github.io/software/repository/github/elizakempton/Exo_Transmit", "api_url": "https://rseng.github.io/software/api/repos/github/elizakempton/Exo_Transmit"}, {"uid": "github/uit-cosmo/blobmodel", "html_url": "https://rseng.github.io/software/repository/github/uit-cosmo/blobmodel", "api_url": "https://rseng.github.io/software/api/repos/github/uit-cosmo/blobmodel"}, {"uid": "github/samhforbes/PupillometryR", "html_url": "https://rseng.github.io/software/repository/github/samhforbes/PupillometryR", "api_url": "https://rseng.github.io/software/api/repos/github/samhforbes/PupillometryR"}, {"uid": "github/laurazara/IgIDivA", "html_url": "https://rseng.github.io/software/repository/github/laurazara/IgIDivA", "api_url": "https://rseng.github.io/software/api/repos/github/laurazara/IgIDivA"}, {"uid": "github/gilestrolab/ethoscope", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/ethoscope", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/ethoscope"}, {"uid": "github/gilestrolab/pySolo", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/pySolo", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/pySolo"}, {"uid": "github/rafaeleufrasio/lightning", "html_url": "https://rseng.github.io/software/repository/github/rafaeleufrasio/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/rafaeleufrasio/lightning"}, {"uid": "github/BiodataAnalysisGroup/UMIc", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/UMIc", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/UMIc"}, {"uid": "github/BiodataAnalysisGroup/kmerAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/kmerAnalyzer"}, {"uid": "github/linksmart/thing-directory", "html_url": "https://rseng.github.io/software/repository/github/linksmart/thing-directory", "api_url": "https://rseng.github.io/software/api/repos/github/linksmart/thing-directory"}, {"uid": "github/jacob-long/jtools", "html_url": "https://rseng.github.io/software/repository/github/jacob-long/jtools", "api_url": "https://rseng.github.io/software/api/repos/github/jacob-long/jtools"}, {"uid": "github/transientskp/tkp", "html_url": "https://rseng.github.io/software/repository/github/transientskp/tkp", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/tkp"}, {"uid": "github/transientskp/pyse", "html_url": "https://rseng.github.io/software/repository/github/transientskp/pyse", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/pyse"}, {"uid": "github/transientskp/lpf", "html_url": "https://rseng.github.io/software/repository/github/transientskp/lpf", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/lpf"}, {"uid": "github/rramadeu/AGHmatrix", "html_url": "https://rseng.github.io/software/repository/github/rramadeu/AGHmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/rramadeu/AGHmatrix"}, {"uid": "github/JuliaArrays/BlockArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/BlockArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/BlockArrays.jl"}, {"uid": "github/JuliaArrays/InfiniteArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/InfiniteArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/InfiniteArrays.jl"}, {"uid": "github/JuliaArrays/LazyArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/LazyArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/LazyArrays.jl"}, {"uid": "github/DESI-UR/VAST", "html_url": "https://rseng.github.io/software/repository/github/DESI-UR/VAST", "api_url": "https://rseng.github.io/software/api/repos/github/DESI-UR/VAST"}, {"uid": "github/jianhuupenn/SpaGCN", "html_url": "https://rseng.github.io/software/repository/github/jianhuupenn/SpaGCN", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuupenn/SpaGCN"}, {"uid": "github/jamesaird/FAST", "html_url": "https://rseng.github.io/software/repository/github/jamesaird/FAST", "api_url": "https://rseng.github.io/software/api/repos/github/jamesaird/FAST"}, {"uid": "github/mrazomej/AutoEncoderToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/mrazomej/AutoEncoderToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mrazomej/AutoEncoderToolkit.jl"}, {"uid": "github/difuture-lmu/dsBinVal", "html_url": "https://rseng.github.io/software/repository/github/difuture-lmu/dsBinVal", "api_url": "https://rseng.github.io/software/api/repos/github/difuture-lmu/dsBinVal"}, {"uid": "github/connor-lab/vapor", "html_url": "https://rseng.github.io/software/repository/github/connor-lab/vapor", "api_url": "https://rseng.github.io/software/api/repos/github/connor-lab/vapor"}, {"uid": "github/yuansh3354/CaSee", "html_url": "https://rseng.github.io/software/repository/github/yuansh3354/CaSee", "api_url": "https://rseng.github.io/software/api/repos/github/yuansh3354/CaSee"}, {"uid": "github/amoradinejad/limHaloPT", "html_url": "https://rseng.github.io/software/repository/github/amoradinejad/limHaloPT", "api_url": "https://rseng.github.io/software/api/repos/github/amoradinejad/limHaloPT"}, {"uid": "github/Feng-Ji-Lab/FedIRT", "html_url": "https://rseng.github.io/software/repository/github/Feng-Ji-Lab/FedIRT", "api_url": "https://rseng.github.io/software/api/repos/github/Feng-Ji-Lab/FedIRT"}, {"uid": "github/intake/intake", "html_url": "https://rseng.github.io/software/repository/github/intake/intake", "api_url": "https://rseng.github.io/software/api/repos/github/intake/intake"}, {"uid": "github/jlillo/tpfplotter", "html_url": "https://rseng.github.io/software/repository/github/jlillo/tpfplotter", "api_url": "https://rseng.github.io/software/api/repos/github/jlillo/tpfplotter"}, {"uid": "github/projectmesa/mesa", "html_url": "https://rseng.github.io/software/repository/github/projectmesa/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/projectmesa/mesa"}, {"uid": "github/ParkerLab/ataqv", "html_url": "https://rseng.github.io/software/repository/github/ParkerLab/ataqv", "api_url": "https://rseng.github.io/software/api/repos/github/ParkerLab/ataqv"}, {"uid": "github/minterpy-project/minterpy", "html_url": "https://rseng.github.io/software/repository/github/minterpy-project/minterpy", "api_url": "https://rseng.github.io/software/api/repos/github/minterpy-project/minterpy"}, {"uid": "github/qMRLab/qMRLab", "html_url": "https://rseng.github.io/software/repository/github/qMRLab/qMRLab", "api_url": "https://rseng.github.io/software/api/repos/github/qMRLab/qMRLab"}, {"uid": "github/myrafproject/myrafproject", "html_url": "https://rseng.github.io/software/repository/github/myrafproject/myrafproject", "api_url": "https://rseng.github.io/software/api/repos/github/myrafproject/myrafproject"}, {"uid": "github/CGAL/cgal", "html_url": "https://rseng.github.io/software/repository/github/CGAL/cgal", "api_url": "https://rseng.github.io/software/api/repos/github/CGAL/cgal"}, {"uid": "github/ulelab/ultraplex", "html_url": "https://rseng.github.io/software/repository/github/ulelab/ultraplex", "api_url": "https://rseng.github.io/software/api/repos/github/ulelab/ultraplex"}, {"uid": "github/Incpink-Liu/DNA-storage-R_plus", "html_url": "https://rseng.github.io/software/repository/github/Incpink-Liu/DNA-storage-R_plus", "api_url": "https://rseng.github.io/software/api/repos/github/Incpink-Liu/DNA-storage-R_plus"}, {"uid": "github/VBlesius/RHRT", "html_url": "https://rseng.github.io/software/repository/github/VBlesius/RHRT", "api_url": "https://rseng.github.io/software/api/repos/github/VBlesius/RHRT"}, {"uid": "github/eggnogdb/eggnog-mapper", "html_url": "https://rseng.github.io/software/repository/github/eggnogdb/eggnog-mapper", "api_url": "https://rseng.github.io/software/api/repos/github/eggnogdb/eggnog-mapper"}, {"uid": "github/sandmanns/CopyDetective", "html_url": "https://rseng.github.io/software/repository/github/sandmanns/CopyDetective", "api_url": "https://rseng.github.io/software/api/repos/github/sandmanns/CopyDetective"}, {"uid": "github/MicGrasso/bigonlight", "html_url": "https://rseng.github.io/software/repository/github/MicGrasso/bigonlight", "api_url": "https://rseng.github.io/software/api/repos/github/MicGrasso/bigonlight"}, {"uid": "github/agusinac/OmicFlow", "html_url": "https://rseng.github.io/software/repository/github/agusinac/OmicFlow", "api_url": "https://rseng.github.io/software/api/repos/github/agusinac/OmicFlow"}, {"uid": "github/keck-datareductionpipelines/MosfireDRP", "html_url": "https://rseng.github.io/software/repository/github/keck-datareductionpipelines/MosfireDRP", "api_url": "https://rseng.github.io/software/api/repos/github/keck-datareductionpipelines/MosfireDRP"}, {"uid": "github/Cloud-Drift/clouddrift", "html_url": "https://rseng.github.io/software/repository/github/Cloud-Drift/clouddrift", "api_url": "https://rseng.github.io/software/api/repos/github/Cloud-Drift/clouddrift"}, {"uid": "github/wesleyburr/subMaldi", "html_url": "https://rseng.github.io/software/repository/github/wesleyburr/subMaldi", "api_url": "https://rseng.github.io/software/api/repos/github/wesleyburr/subMaldi"}, {"uid": "github/trinityrnaseq/wiki", "html_url": "https://rseng.github.io/software/repository/github/trinityrnaseq/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/trinityrnaseq/wiki"}, {"uid": "github/andreaminio/haplosync", "html_url": "https://rseng.github.io/software/repository/github/andreaminio/haplosync", "api_url": "https://rseng.github.io/software/api/repos/github/andreaminio/haplosync"}, {"uid": "github/pyxnat/pyxnat", "html_url": "https://rseng.github.io/software/repository/github/pyxnat/pyxnat", "api_url": "https://rseng.github.io/software/api/repos/github/pyxnat/pyxnat"}, {"uid": "github/cb-geo/mpm", "html_url": "https://rseng.github.io/software/repository/github/cb-geo/mpm", "api_url": "https://rseng.github.io/software/api/repos/github/cb-geo/mpm"}, {"uid": "github/kathlandgren/SWAMPE", "html_url": "https://rseng.github.io/software/repository/github/kathlandgren/SWAMPE", "api_url": "https://rseng.github.io/software/api/repos/github/kathlandgren/SWAMPE"}, {"uid": "github/Ambuj-UF/APOP", "html_url": "https://rseng.github.io/software/repository/github/Ambuj-UF/APOP", "api_url": "https://rseng.github.io/software/api/repos/github/Ambuj-UF/APOP"}, {"uid": "github/dicompyler/dicompyler-core", "html_url": "https://rseng.github.io/software/repository/github/dicompyler/dicompyler-core", "api_url": "https://rseng.github.io/software/api/repos/github/dicompyler/dicompyler-core"}, {"uid": "github/KTH-Nek5000/UQit", "html_url": "https://rseng.github.io/software/repository/github/KTH-Nek5000/UQit", "api_url": "https://rseng.github.io/software/api/repos/github/KTH-Nek5000/UQit"}, {"uid": "github/uwsbel/low-fidelity-dynamic-models", "html_url": "https://rseng.github.io/software/repository/github/uwsbel/low-fidelity-dynamic-models", "api_url": "https://rseng.github.io/software/api/repos/github/uwsbel/low-fidelity-dynamic-models"}, {"uid": "github/delphes/delphes", "html_url": "https://rseng.github.io/software/repository/github/delphes/delphes", "api_url": "https://rseng.github.io/software/api/repos/github/delphes/delphes"}, {"uid": "github/stingraysoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/stingraysoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/stingraysoftware/stingray"}, {"uid": "github/slzarate/parliament2", "html_url": "https://rseng.github.io/software/repository/github/slzarate/parliament2", "api_url": "https://rseng.github.io/software/api/repos/github/slzarate/parliament2"}, {"uid": "github/jspsych/jspsych", "html_url": "https://rseng.github.io/software/repository/github/jspsych/jspsych", "api_url": "https://rseng.github.io/software/api/repos/github/jspsych/jspsych"}, {"uid": "github/chembl/EnsembleFlex", "html_url": "https://rseng.github.io/software/repository/github/chembl/EnsembleFlex", "api_url": "https://rseng.github.io/software/api/repos/github/chembl/EnsembleFlex"}, {"uid": "github/keckert7/codes", "html_url": "https://rseng.github.io/software/repository/github/keckert7/codes", "api_url": "https://rseng.github.io/software/api/repos/github/keckert7/codes"}, {"uid": "github/facom/exorings", "html_url": "https://rseng.github.io/software/repository/github/facom/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/facom/exorings"}, {"uid": "github/facom/BHMcalc", "html_url": "https://rseng.github.io/software/repository/github/facom/BHMcalc", "api_url": "https://rseng.github.io/software/api/repos/github/facom/BHMcalc"}, {"uid": "github/facom/tidev", "html_url": "https://rseng.github.io/software/repository/github/facom/tidev", "api_url": "https://rseng.github.io/software/api/repos/github/facom/tidev"}, {"uid": "github/jianhuig/fairmetrics", "html_url": "https://rseng.github.io/software/repository/github/jianhuig/fairmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuig/fairmetrics"}, {"uid": "github/cwinpy/cwinpy", "html_url": "https://rseng.github.io/software/repository/github/cwinpy/cwinpy", "api_url": "https://rseng.github.io/software/api/repos/github/cwinpy/cwinpy"}, {"uid": "github/yrjia1015/CRISPRCasStack", "html_url": "https://rseng.github.io/software/repository/github/yrjia1015/CRISPRCasStack", "api_url": "https://rseng.github.io/software/api/repos/github/yrjia1015/CRISPRCasStack"}, {"uid": "github/kevin-tofu/scikit-topt", "html_url": "https://rseng.github.io/software/repository/github/kevin-tofu/scikit-topt", "api_url": "https://rseng.github.io/software/api/repos/github/kevin-tofu/scikit-topt"}, {"uid": "github/qboxcode/qbox-public", "html_url": "https://rseng.github.io/software/repository/github/qboxcode/qbox-public", "api_url": "https://rseng.github.io/software/api/repos/github/qboxcode/qbox-public"}, {"uid": "github/AaronDavidSchneider/chemcomp", "html_url": "https://rseng.github.io/software/repository/github/AaronDavidSchneider/chemcomp", "api_url": "https://rseng.github.io/software/api/repos/github/AaronDavidSchneider/chemcomp"}, {"uid": "github/njcuk9999/apero-drs", "html_url": "https://rseng.github.io/software/repository/github/njcuk9999/apero-drs", "api_url": "https://rseng.github.io/software/api/repos/github/njcuk9999/apero-drs"}, {"uid": "github/mjshao06/pdifFinder", "html_url": "https://rseng.github.io/software/repository/github/mjshao06/pdifFinder", "api_url": "https://rseng.github.io/software/api/repos/github/mjshao06/pdifFinder"}, {"uid": "github/apertif/apercal", "html_url": "https://rseng.github.io/software/repository/github/apertif/apercal", "api_url": "https://rseng.github.io/software/api/repos/github/apertif/apercal"}, {"uid": "github/VicidominiLab/BrightEyes-MCS", "html_url": "https://rseng.github.io/software/repository/github/VicidominiLab/BrightEyes-MCS", "api_url": "https://rseng.github.io/software/api/repos/github/VicidominiLab/BrightEyes-MCS"}, {"uid": "github/cy-xu/cosmic-conn", "html_url": "https://rseng.github.io/software/repository/github/cy-xu/cosmic-conn", "api_url": "https://rseng.github.io/software/api/repos/github/cy-xu/cosmic-conn"}, {"uid": "github/cameronliang/BayesVP", "html_url": "https://rseng.github.io/software/repository/github/cameronliang/BayesVP", "api_url": "https://rseng.github.io/software/api/repos/github/cameronliang/BayesVP"}, {"uid": "github/quanted/esat", "html_url": "https://rseng.github.io/software/repository/github/quanted/esat", "api_url": "https://rseng.github.io/software/api/repos/github/quanted/esat"}, {"uid": "github/relipmoc/skewer", "html_url": "https://rseng.github.io/software/repository/github/relipmoc/skewer", "api_url": "https://rseng.github.io/software/api/repos/github/relipmoc/skewer"}, {"uid": "github/YuLab-SMU/treeio", "html_url": "https://rseng.github.io/software/repository/github/YuLab-SMU/treeio", "api_url": "https://rseng.github.io/software/api/repos/github/YuLab-SMU/treeio"}, {"uid": "github/deezer/spleeter", "html_url": "https://rseng.github.io/software/repository/github/deezer/spleeter", "api_url": "https://rseng.github.io/software/api/repos/github/deezer/spleeter"}, {"uid": "github/ilaudy/PIAO", "html_url": "https://rseng.github.io/software/repository/github/ilaudy/PIAO", "api_url": "https://rseng.github.io/software/api/repos/github/ilaudy/PIAO"}, {"uid": "github/kboone/parsnip", "html_url": "https://rseng.github.io/software/repository/github/kboone/parsnip", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/parsnip"}, {"uid": "github/kboone/avocado", "html_url": "https://rseng.github.io/software/repository/github/kboone/avocado", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/avocado"}, {"uid": "github/franciscovillaescusa/Pylians", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians"}, {"uid": "github/franciscovillaescusa/Pylians3", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians3", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians3"}, {"uid": "github/illumina/pyflow", "html_url": "https://rseng.github.io/software/repository/github/illumina/pyflow", "api_url": "https://rseng.github.io/software/api/repos/github/illumina/pyflow"}, {"uid": "github/GabrielNakamura/FishPhyloMaker", "html_url": "https://rseng.github.io/software/repository/github/GabrielNakamura/FishPhyloMaker", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielNakamura/FishPhyloMaker"}, {"uid": "github/mikesmitka/truvot", "html_url": "https://rseng.github.io/software/repository/github/mikesmitka/truvot", "api_url": "https://rseng.github.io/software/api/repos/github/mikesmitka/truvot"}, {"uid": "github/martinlackner/abcvoting", "html_url": "https://rseng.github.io/software/repository/github/martinlackner/abcvoting", "api_url": "https://rseng.github.io/software/api/repos/github/martinlackner/abcvoting"}, {"uid": "github/bessagroup/f3dasm", "html_url": "https://rseng.github.io/software/repository/github/bessagroup/f3dasm", "api_url": "https://rseng.github.io/software/api/repos/github/bessagroup/f3dasm"}, {"uid": "github/ManuelRausch/StatConfR", "html_url": "https://rseng.github.io/software/repository/github/ManuelRausch/StatConfR", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelRausch/StatConfR"}, {"uid": "github/geopandas/geopandas", "html_url": "https://rseng.github.io/software/repository/github/geopandas/geopandas", "api_url": "https://rseng.github.io/software/api/repos/github/geopandas/geopandas"}, {"uid": "github/pscicluna/precision", "html_url": "https://rseng.github.io/software/repository/github/pscicluna/precision", "api_url": "https://rseng.github.io/software/api/repos/github/pscicluna/precision"}, {"uid": "github/FredHutch/SEACR", "html_url": "https://rseng.github.io/software/repository/github/FredHutch/SEACR", "api_url": "https://rseng.github.io/software/api/repos/github/FredHutch/SEACR"}, {"uid": "github/dzesmin/TEA", "html_url": "https://rseng.github.io/software/repository/github/dzesmin/TEA", "api_url": "https://rseng.github.io/software/api/repos/github/dzesmin/TEA"}, {"uid": "github/blobtoolkit/viewer", "html_url": "https://rseng.github.io/software/repository/github/blobtoolkit/viewer", "api_url": "https://rseng.github.io/software/api/repos/github/blobtoolkit/viewer"}, {"uid": "github/thom991/MSIQuickView", "html_url": "https://rseng.github.io/software/repository/github/thom991/MSIQuickView", "api_url": "https://rseng.github.io/software/api/repos/github/thom991/MSIQuickView"}, {"uid": "github/arup-group/pam", "html_url": "https://rseng.github.io/software/repository/github/arup-group/pam", "api_url": "https://rseng.github.io/software/api/repos/github/arup-group/pam"}, {"uid": "github/MichelleLochner/astronomaly", "html_url": "https://rseng.github.io/software/repository/github/MichelleLochner/astronomaly", "api_url": "https://rseng.github.io/software/api/repos/github/MichelleLochner/astronomaly"}, {"uid": "github/SirSharpest/NarrowEscapeSimulator", "html_url": "https://rseng.github.io/software/repository/github/SirSharpest/NarrowEscapeSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/SirSharpest/NarrowEscapeSimulator"}, {"uid": "github/LucaJRossi/NIGO", "html_url": "https://rseng.github.io/software/repository/github/LucaJRossi/NIGO", "api_url": "https://rseng.github.io/software/api/repos/github/LucaJRossi/NIGO"}, {"uid": "github/iobio-zjut/IPTDFold", "html_url": "https://rseng.github.io/software/repository/github/iobio-zjut/IPTDFold", "api_url": "https://rseng.github.io/software/api/repos/github/iobio-zjut/IPTDFold"}, {"uid": "github/liushang17/AEnet", "html_url": "https://rseng.github.io/software/repository/github/liushang17/AEnet", "api_url": "https://rseng.github.io/software/api/repos/github/liushang17/AEnet"}, {"uid": "github/alphaparrot/ExoPlaSim", "html_url": "https://rseng.github.io/software/repository/github/alphaparrot/ExoPlaSim", "api_url": "https://rseng.github.io/software/api/repos/github/alphaparrot/ExoPlaSim"}, {"uid": "github/HUPO-PSI/mzspeclib-py", "html_url": "https://rseng.github.io/software/repository/github/HUPO-PSI/mzspeclib-py", "api_url": "https://rseng.github.io/software/api/repos/github/HUPO-PSI/mzspeclib-py"}, {"uid": "github/lorenzo-rovigatti/oxDNA", "html_url": "https://rseng.github.io/software/repository/github/lorenzo-rovigatti/oxDNA", "api_url": "https://rseng.github.io/software/api/repos/github/lorenzo-rovigatti/oxDNA"}, {"uid": "github/isoverse/isoreader", "html_url": "https://rseng.github.io/software/repository/github/isoverse/isoreader", "api_url": "https://rseng.github.io/software/api/repos/github/isoverse/isoreader"}, {"uid": "github/JPenuchot/ctbench", "html_url": "https://rseng.github.io/software/repository/github/JPenuchot/ctbench", "api_url": "https://rseng.github.io/software/api/repos/github/JPenuchot/ctbench"}, {"uid": "github/Trybnetic/paat", "html_url": "https://rseng.github.io/software/repository/github/Trybnetic/paat", "api_url": "https://rseng.github.io/software/api/repos/github/Trybnetic/paat"}, {"uid": "github/luinix/pesco", "html_url": "https://rseng.github.io/software/repository/github/luinix/pesco", "api_url": "https://rseng.github.io/software/api/repos/github/luinix/pesco"}, {"uid": "github/harvard-nrg/scanbuddy", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/scanbuddy", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/scanbuddy"}, {"uid": "github/harvard-nrg/dwiqc", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/dwiqc", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/dwiqc"}, {"uid": "github/gasparl/possa", "html_url": "https://rseng.github.io/software/repository/github/gasparl/possa", "api_url": "https://rseng.github.io/software/api/repos/github/gasparl/possa"}, {"uid": "github/Ashod/garli", "html_url": "https://rseng.github.io/software/repository/github/Ashod/garli", "api_url": "https://rseng.github.io/software/api/repos/github/Ashod/garli"}, {"uid": "github/computational-metabolomics/msnpy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/msnpy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/msnpy"}, {"uid": "github/computational-metabolomics/dimspy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/dimspy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/dimspy"}, {"uid": "github/dunhamlab/PacRAT", "html_url": "https://rseng.github.io/software/repository/github/dunhamlab/PacRAT", "api_url": "https://rseng.github.io/software/api/repos/github/dunhamlab/PacRAT"}, {"uid": "github/circuitgraph/circuitgraph", "html_url": "https://rseng.github.io/software/repository/github/circuitgraph/circuitgraph", "api_url": "https://rseng.github.io/software/api/repos/github/circuitgraph/circuitgraph"}, {"uid": "github/galaxyecology/tools-ecology", "html_url": "https://rseng.github.io/software/repository/github/galaxyecology/tools-ecology", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyecology/tools-ecology"}, {"uid": "github/shishirdholakia/eclipsoid", "html_url": "https://rseng.github.io/software/repository/github/shishirdholakia/eclipsoid", "api_url": "https://rseng.github.io/software/api/repos/github/shishirdholakia/eclipsoid"}, {"uid": "github/Novartis/torchsurv", "html_url": "https://rseng.github.io/software/repository/github/Novartis/torchsurv", "api_url": "https://rseng.github.io/software/api/repos/github/Novartis/torchsurv"}, {"uid": "github/firefly-cpp/NiaARM", "html_url": "https://rseng.github.io/software/repository/github/firefly-cpp/NiaARM", "api_url": "https://rseng.github.io/software/api/repos/github/firefly-cpp/NiaARM"}, {"uid": "github/shandley/hecatomb", "html_url": "https://rseng.github.io/software/repository/github/shandley/hecatomb", "api_url": "https://rseng.github.io/software/api/repos/github/shandley/hecatomb"}, {"uid": "github/Danko-Lab/dREG", "html_url": "https://rseng.github.io/software/repository/github/Danko-Lab/dREG", "api_url": "https://rseng.github.io/software/api/repos/github/Danko-Lab/dREG"}, {"uid": "github/AstroVPK/kali", "html_url": "https://rseng.github.io/software/repository/github/AstroVPK/kali", "api_url": "https://rseng.github.io/software/api/repos/github/AstroVPK/kali"}, {"uid": "github/agsreejith/CONTROL", "html_url": "https://rseng.github.io/software/repository/github/agsreejith/CONTROL", "api_url": "https://rseng.github.io/software/api/repos/github/agsreejith/CONTROL"}, {"uid": "github/panoptes/POCS", "html_url": "https://rseng.github.io/software/repository/github/panoptes/POCS", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes/POCS"}, {"uid": "github/timoast/signac", "html_url": "https://rseng.github.io/software/repository/github/timoast/signac", "api_url": "https://rseng.github.io/software/api/repos/github/timoast/signac"}, {"uid": "github/vallima/PRyMordial", "html_url": "https://rseng.github.io/software/repository/github/vallima/PRyMordial", "api_url": "https://rseng.github.io/software/api/repos/github/vallima/PRyMordial"}, {"uid": "github/peterjc/galaxy_blast", "html_url": "https://rseng.github.io/software/repository/github/peterjc/galaxy_blast", "api_url": "https://rseng.github.io/software/api/repos/github/peterjc/galaxy_blast"}, {"uid": "github/ysekig/GPMsDB-dbtk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-dbtk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-dbtk"}, {"uid": "github/ysekig/GPMsDB-tk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-tk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-tk"}, {"uid": "github/rpetit3/fastq-dl", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-dl", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-dl"}, {"uid": "github/rpetit3/fastq-scan", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-scan", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-scan"}, {"uid": "github/martenlourens/SHARC", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/SHARC", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/SHARC"}, {"uid": "github/martenlourens/pySDR", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/pySDR", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/pySDR"}, {"uid": "github/vsquicciarini/madys", "html_url": "https://rseng.github.io/software/repository/github/vsquicciarini/madys", "api_url": "https://rseng.github.io/software/api/repos/github/vsquicciarini/madys"}, {"uid": "github/sevimcengiz/Oryx-MRSI", "html_url": "https://rseng.github.io/software/repository/github/sevimcengiz/Oryx-MRSI", "api_url": "https://rseng.github.io/software/api/repos/github/sevimcengiz/Oryx-MRSI"}, {"uid": "github/Lindt8/PHITS-Tools", "html_url": "https://rseng.github.io/software/repository/github/Lindt8/PHITS-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/Lindt8/PHITS-Tools"}, {"uid": "github/yogi-tud/space_gpu", "html_url": "https://rseng.github.io/software/repository/github/yogi-tud/space_gpu", "api_url": "https://rseng.github.io/software/api/repos/github/yogi-tud/space_gpu"}, {"uid": "github/cgarraffo/StelNet", "html_url": "https://rseng.github.io/software/repository/github/cgarraffo/StelNet", "api_url": "https://rseng.github.io/software/api/repos/github/cgarraffo/StelNet"}, {"uid": "github/churchmanlab/genewalk", "html_url": "https://rseng.github.io/software/repository/github/churchmanlab/genewalk", "api_url": "https://rseng.github.io/software/api/repos/github/churchmanlab/genewalk"}, {"uid": "github/indrops/indrops", "html_url": "https://rseng.github.io/software/repository/github/indrops/indrops", "api_url": "https://rseng.github.io/software/api/repos/github/indrops/indrops"}, {"uid": "github/caracal-pipeline/stimela", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/stimela", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/stimela"}, {"uid": "github/caracal-pipeline/caracal", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/caracal", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/caracal"}, {"uid": "github/vedantchandra/wdtools", "html_url": "https://rseng.github.io/software/repository/github/vedantchandra/wdtools", "api_url": "https://rseng.github.io/software/api/repos/github/vedantchandra/wdtools"}, {"uid": "github/icredd-cheminfo/CGRdb2", "html_url": "https://rseng.github.io/software/repository/github/icredd-cheminfo/CGRdb2", "api_url": "https://rseng.github.io/software/api/repos/github/icredd-cheminfo/CGRdb2"}, {"uid": "github/DirectDM/directdm-mma", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-mma", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-mma"}, {"uid": "github/DirectDM/directdm-py", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-py", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-py"}, {"uid": "github/mtakahiro/bbpn", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/bbpn", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/bbpn"}, {"uid": "github/mtakahiro/gsf", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/gsf"}, {"uid": "github/seheonoh/2dbat", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/2dbat", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/2dbat"}, {"uid": "github/seheonoh/baygaud", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/baygaud", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/baygaud"}, {"uid": "github/icb-dcm/pyabc", "html_url": "https://rseng.github.io/software/repository/github/icb-dcm/pyabc", "api_url": "https://rseng.github.io/software/api/repos/github/icb-dcm/pyabc"}, {"uid": "github/sihanjiao/j-comb", "html_url": "https://rseng.github.io/software/repository/github/sihanjiao/j-comb", "api_url": "https://rseng.github.io/software/api/repos/github/sihanjiao/j-comb"}, {"uid": "github/trichter/yam", "html_url": "https://rseng.github.io/software/repository/github/trichter/yam", "api_url": "https://rseng.github.io/software/api/repos/github/trichter/yam"}, {"uid": "github/mikhailklassen/protostellar_evolution", "html_url": "https://rseng.github.io/software/repository/github/mikhailklassen/protostellar_evolution", "api_url": "https://rseng.github.io/software/api/repos/github/mikhailklassen/protostellar_evolution"}, {"uid": "github/gmarcais/Jellyfish", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Jellyfish", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Jellyfish"}, {"uid": "github/gmarcais/Quorum", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Quorum", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Quorum"}, {"uid": "github/ptiede/Comrade.jl", "html_url": "https://rseng.github.io/software/repository/github/ptiede/Comrade.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ptiede/Comrade.jl"}, {"uid": "github/DGtal-team/DGtal", "html_url": "https://rseng.github.io/software/repository/github/DGtal-team/DGtal", "api_url": "https://rseng.github.io/software/api/repos/github/DGtal-team/DGtal"}, {"uid": "github/tony-travis/PIQUE", "html_url": "https://rseng.github.io/software/repository/github/tony-travis/PIQUE", "api_url": "https://rseng.github.io/software/api/repos/github/tony-travis/PIQUE"}, {"uid": "github/gururajw/superlite", "html_url": "https://rseng.github.io/software/repository/github/gururajw/superlite", "api_url": "https://rseng.github.io/software/api/repos/github/gururajw/superlite"}, {"uid": "github/CIBERER/nf-CBRA-snvs", "html_url": "https://rseng.github.io/software/repository/github/CIBERER/nf-CBRA-snvs", "api_url": "https://rseng.github.io/software/api/repos/github/CIBERER/nf-CBRA-snvs"}, {"uid": "github/sisl/ExpFamilyPCA.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/ExpFamilyPCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/ExpFamilyPCA.jl"}, {"uid": "github/sisl/PyroRL", "html_url": "https://rseng.github.io/software/repository/github/sisl/PyroRL", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/PyroRL"}, {"uid": "github/sisl/POMDPStressTesting.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/POMDPStressTesting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/POMDPStressTesting.jl"}, {"uid": "github/vreverdy/magrathea-pathfinder", "html_url": "https://rseng.github.io/software/repository/github/vreverdy/magrathea-pathfinder", "api_url": "https://rseng.github.io/software/api/repos/github/vreverdy/magrathea-pathfinder"}, {"uid": "github/pudu-py/pudu", "html_url": "https://rseng.github.io/software/repository/github/pudu-py/pudu", "api_url": "https://rseng.github.io/software/api/repos/github/pudu-py/pudu"}, {"uid": "github/AndreNicolasChene/DRAGRACES", "html_url": "https://rseng.github.io/software/repository/github/AndreNicolasChene/DRAGRACES", "api_url": "https://rseng.github.io/software/api/repos/github/AndreNicolasChene/DRAGRACES"}, {"uid": "github/mackelab/sbi", "html_url": "https://rseng.github.io/software/repository/github/mackelab/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/mackelab/sbi"}, {"uid": "github/sebastien-plutniak/archeofrag", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeofrag", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeofrag"}, {"uid": "github/sebastien-plutniak/archeoviz", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeoviz", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeoviz"}, {"uid": "github/hrwakeford/ExoTiC-ISM", "html_url": "https://rseng.github.io/software/repository/github/hrwakeford/ExoTiC-ISM", "api_url": "https://rseng.github.io/software/api/repos/github/hrwakeford/ExoTiC-ISM"}, {"uid": "github/SWE-UniStuttgart/Qlunc", "html_url": "https://rseng.github.io/software/repository/github/SWE-UniStuttgart/Qlunc", "api_url": "https://rseng.github.io/software/api/repos/github/SWE-UniStuttgart/Qlunc"}, {"uid": "github/timothygebhard/ml4ptp", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/ml4ptp", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/ml4ptp"}, {"uid": "github/timothygebhard/fm4ar", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/fm4ar", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/fm4ar"}, {"uid": "github/bioinfo-center-pasteur-fr/toppred", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-center-pasteur-fr/toppred", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-center-pasteur-fr/toppred"}, {"uid": "github/BarquistLab/mason_paper", "html_url": "https://rseng.github.io/software/repository/github/BarquistLab/mason_paper", "api_url": "https://rseng.github.io/software/api/repos/github/BarquistLab/mason_paper"}, {"uid": "github/mrilikecoding/StreamPoseML", "html_url": "https://rseng.github.io/software/repository/github/mrilikecoding/StreamPoseML", "api_url": "https://rseng.github.io/software/api/repos/github/mrilikecoding/StreamPoseML"}, {"uid": "github/michaeltouati/ESVM", "html_url": "https://rseng.github.io/software/repository/github/michaeltouati/ESVM", "api_url": "https://rseng.github.io/software/api/repos/github/michaeltouati/ESVM"}, {"uid": "github/nathanaelbosch/ProbNumDiffEq.jl", "html_url": "https://rseng.github.io/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nathanaelbosch/ProbNumDiffEq.jl"}, {"uid": "github/Washington-University/CiftiLib", "html_url": "https://rseng.github.io/software/repository/github/Washington-University/CiftiLib", "api_url": "https://rseng.github.io/software/api/repos/github/Washington-University/CiftiLib"}, {"uid": "github/lyalpha/pympc", "html_url": "https://rseng.github.io/software/repository/github/lyalpha/pympc", "api_url": "https://rseng.github.io/software/api/repos/github/lyalpha/pympc"}, {"uid": "github/RenLabBioinformatics/M6Allele", "html_url": "https://rseng.github.io/software/repository/github/RenLabBioinformatics/M6Allele", "api_url": "https://rseng.github.io/software/api/repos/github/RenLabBioinformatics/M6Allele"}, {"uid": "github/cbg-ethz/shorah", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/shorah", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/shorah"}, {"uid": "github/cbg-ethz/smallgenomeutilities", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/smallgenomeutilities", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/smallgenomeutilities"}, {"uid": "github/cbg-ethz/PredictHaplo", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/PredictHaplo", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/PredictHaplo"}, {"uid": "github/cbg-ethz/LolliPop", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/LolliPop", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/LolliPop"}, {"uid": "github/cbg-ethz/V-pipe", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/V-pipe", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/V-pipe"}, {"uid": "github/bencebeky/spotrod", "html_url": "https://rseng.github.io/software/repository/github/bencebeky/spotrod", "api_url": "https://rseng.github.io/software/api/repos/github/bencebeky/spotrod"}, {"uid": "github/OPUS-MaLab/opus_fold3", "html_url": "https://rseng.github.io/software/repository/github/OPUS-MaLab/opus_fold3", "api_url": "https://rseng.github.io/software/api/repos/github/OPUS-MaLab/opus_fold3"}, {"uid": "github/automl/amltk", "html_url": "https://rseng.github.io/software/repository/github/automl/amltk", "api_url": "https://rseng.github.io/software/api/repos/github/automl/amltk"}, {"uid": "github/amerand/PMOIRED", "html_url": "https://rseng.github.io/software/repository/github/amerand/PMOIRED", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/PMOIRED"}, {"uid": "github/amerand/CANDID", "html_url": "https://rseng.github.io/software/repository/github/amerand/CANDID", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/CANDID"}, {"uid": "github/amerand/SPIPS", "html_url": "https://rseng.github.io/software/repository/github/amerand/SPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/SPIPS"}, {"uid": "github/imr-framework/OCTOPUS", "html_url": "https://rseng.github.io/software/repository/github/imr-framework/OCTOPUS", "api_url": "https://rseng.github.io/software/api/repos/github/imr-framework/OCTOPUS"}, {"uid": "github/j-erler/pymf", "html_url": "https://rseng.github.io/software/repository/github/j-erler/pymf", "api_url": "https://rseng.github.io/software/api/repos/github/j-erler/pymf"}, {"uid": "github/networkx/networkx", "html_url": "https://rseng.github.io/software/repository/github/networkx/networkx", "api_url": "https://rseng.github.io/software/api/repos/github/networkx/networkx"}, {"uid": "github/opimwue/ddop", "html_url": "https://rseng.github.io/software/repository/github/opimwue/ddop", "api_url": "https://rseng.github.io/software/api/repos/github/opimwue/ddop"}, {"uid": "github/joe-antognini/kozai", "html_url": "https://rseng.github.io/software/repository/github/joe-antognini/kozai", "api_url": "https://rseng.github.io/software/api/repos/github/joe-antognini/kozai"}, {"uid": "github/psheehan/pdspy", "html_url": "https://rseng.github.io/software/repository/github/psheehan/pdspy", "api_url": "https://rseng.github.io/software/api/repos/github/psheehan/pdspy"}, {"uid": "github/mischaschirmer/nebular", "html_url": "https://rseng.github.io/software/repository/github/mischaschirmer/nebular", "api_url": "https://rseng.github.io/software/api/repos/github/mischaschirmer/nebular"}, {"uid": "github/pennsignals/chime", "html_url": "https://rseng.github.io/software/repository/github/pennsignals/chime", "api_url": "https://rseng.github.io/software/api/repos/github/pennsignals/chime"}, {"uid": "github/yangfangs/test_GFICLEE", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/test_GFICLEE", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/test_GFICLEE"}, {"uid": "github/yangfangs/KPP", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/KPP", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/KPP"}, {"uid": "github/arpan-52/Finalflash", "html_url": "https://rseng.github.io/software/repository/github/arpan-52/Finalflash", "api_url": "https://rseng.github.io/software/api/repos/github/arpan-52/Finalflash"}, {"uid": "github/OpenWaterAnalytics/EPyT", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/EPyT", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/EPyT"}, {"uid": "github/OpenWaterAnalytics/pyswmm", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/pyswmm", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/pyswmm"}, {"uid": "github/Freakwill/pyrimidine", "html_url": "https://rseng.github.io/software/repository/github/Freakwill/pyrimidine", "api_url": "https://rseng.github.io/software/api/repos/github/Freakwill/pyrimidine"}, {"uid": "github/kibokov/grumpy", "html_url": "https://rseng.github.io/software/repository/github/kibokov/grumpy", "api_url": "https://rseng.github.io/software/api/repos/github/kibokov/grumpy"}, {"uid": "github/duffell/Duffell_Gap", "html_url": "https://rseng.github.io/software/repository/github/duffell/Duffell_Gap", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Duffell_Gap"}, {"uid": "github/duffell/RT1D", "html_url": "https://rseng.github.io/software/repository/github/duffell/RT1D", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/RT1D"}, {"uid": "github/duffell/Disco", "html_url": "https://rseng.github.io/software/repository/github/duffell/Disco", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Disco"}, {"uid": "github/gtayana/CVRMS", "html_url": "https://rseng.github.io/software/repository/github/gtayana/CVRMS", "api_url": "https://rseng.github.io/software/api/repos/github/gtayana/CVRMS"}, {"uid": "github/mranuraggarg/supernovae_classification", "html_url": "https://rseng.github.io/software/repository/github/mranuraggarg/supernovae_classification", "api_url": "https://rseng.github.io/software/api/repos/github/mranuraggarg/supernovae_classification"}, {"uid": "github/alstat/ALUES", "html_url": "https://rseng.github.io/software/repository/github/alstat/ALUES", "api_url": "https://rseng.github.io/software/api/repos/github/alstat/ALUES"}, {"uid": "github/PRIS-CV/DS-UI", "html_url": "https://rseng.github.io/software/repository/github/PRIS-CV/DS-UI", "api_url": "https://rseng.github.io/software/api/repos/github/PRIS-CV/DS-UI"}, {"uid": "github/PhaseTracer/PhaseTracer", "html_url": "https://rseng.github.io/software/repository/github/PhaseTracer/PhaseTracer", "api_url": "https://rseng.github.io/software/api/repos/github/PhaseTracer/PhaseTracer"}, {"uid": "github/selkamand/ggoncoplot", "html_url": "https://rseng.github.io/software/repository/github/selkamand/ggoncoplot", "api_url": "https://rseng.github.io/software/api/repos/github/selkamand/ggoncoplot"}, {"uid": "github/zkdtc/MLC_ELGs", "html_url": "https://rseng.github.io/software/repository/github/zkdtc/MLC_ELGs", "api_url": "https://rseng.github.io/software/api/repos/github/zkdtc/MLC_ELGs"}, {"uid": "github/jmackereth/orbit-estimation", "html_url": "https://rseng.github.io/software/repository/github/jmackereth/orbit-estimation", "api_url": "https://rseng.github.io/software/api/repos/github/jmackereth/orbit-estimation"}, {"uid": "github/ERA-URBAN/fm128_radar", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/fm128_radar", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/fm128_radar"}, {"uid": "github/ERA-URBAN/netcdf2littler", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/netcdf2littler", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/netcdf2littler"}, {"uid": "github/NeoGeographyToolkit/StereoPipeline", "html_url": "https://rseng.github.io/software/repository/github/NeoGeographyToolkit/StereoPipeline", "api_url": "https://rseng.github.io/software/api/repos/github/NeoGeographyToolkit/StereoPipeline"}, {"uid": "github/telatin/seqfu2", "html_url": "https://rseng.github.io/software/repository/github/telatin/seqfu2", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/seqfu2"}, {"uid": "github/telatin/covtobed", "html_url": "https://rseng.github.io/software/repository/github/telatin/covtobed", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/covtobed"}, {"uid": "github/telatin/bamtocov", "html_url": "https://rseng.github.io/software/repository/github/telatin/bamtocov", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/bamtocov"}, {"uid": "github/telatin/qax", "html_url": "https://rseng.github.io/software/repository/github/telatin/qax", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/qax"}, {"uid": "github/csabiu/kstat", "html_url": "https://rseng.github.io/software/repository/github/csabiu/kstat", "api_url": "https://rseng.github.io/software/api/repos/github/csabiu/kstat"}, {"uid": "github/project-asgard/asgard", "html_url": "https://rseng.github.io/software/repository/github/project-asgard/asgard", "api_url": "https://rseng.github.io/software/api/repos/github/project-asgard/asgard"}, {"uid": "github/jean-pierreBoth/gsearch", "html_url": "https://rseng.github.io/software/repository/github/jean-pierreBoth/gsearch", "api_url": "https://rseng.github.io/software/api/repos/github/jean-pierreBoth/gsearch"}, {"uid": "github/webbjj/m2mcluster", "html_url": "https://rseng.github.io/software/repository/github/webbjj/m2mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/m2mcluster"}, {"uid": "github/webbjj/clustertools", "html_url": "https://rseng.github.io/software/repository/github/webbjj/clustertools", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/clustertools"}, {"uid": "github/revoltek/losoto", "html_url": "https://rseng.github.io/software/repository/github/revoltek/losoto", "api_url": "https://rseng.github.io/software/api/repos/github/revoltek/losoto"}, {"uid": "github/ARDG-NRAO/LibRA", "html_url": "https://rseng.github.io/software/repository/github/ARDG-NRAO/LibRA", "api_url": "https://rseng.github.io/software/api/repos/github/ARDG-NRAO/LibRA"}, {"uid": "github/drphilmarshall/HumVI", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/HumVI", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/HumVI"}, {"uid": "github/drphilmarshall/Pangloss", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/Pangloss", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/Pangloss"}, {"uid": "github/lzkelley/kalepy", "html_url": "https://rseng.github.io/software/repository/github/lzkelley/kalepy", "api_url": "https://rseng.github.io/software/api/repos/github/lzkelley/kalepy"}, {"uid": "github/dhubber/seren", "html_url": "https://rseng.github.io/software/repository/github/dhubber/seren", "api_url": "https://rseng.github.io/software/api/repos/github/dhubber/seren"}, {"uid": "github/dylancromer/maszcal", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/maszcal", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/maszcal"}, {"uid": "github/dylancromer/ostrich", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/ostrich", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/ostrich"}, {"uid": "github/ylxu05/HN-PPISP", "html_url": "https://rseng.github.io/software/repository/github/ylxu05/HN-PPISP", "api_url": "https://rseng.github.io/software/api/repos/github/ylxu05/HN-PPISP"}, {"uid": "github/surhudm/aum", "html_url": "https://rseng.github.io/software/repository/github/surhudm/aum", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/aum"}, {"uid": "github/surhudm/savitzky_golay_with_errors", "html_url": "https://rseng.github.io/software/repository/github/surhudm/savitzky_golay_with_errors", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/savitzky_golay_with_errors"}, {"uid": "github/abatten/fruitbat", "html_url": "https://rseng.github.io/software/repository/github/abatten/fruitbat", "api_url": "https://rseng.github.io/software/api/repos/github/abatten/fruitbat"}, {"uid": "github/mad-lab-fau/tpcp", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/tpcp", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/tpcp"}, {"uid": "github/mad-lab-fau/imucal", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/imucal", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/imucal"}, {"uid": "github/QZH2022/germline_flow", "html_url": "https://rseng.github.io/software/repository/github/QZH2022/germline_flow", "api_url": "https://rseng.github.io/software/api/repos/github/QZH2022/germline_flow"}, {"uid": "github/brandon-rhodes/python-jplephem", "html_url": "https://rseng.github.io/software/repository/github/brandon-rhodes/python-jplephem", "api_url": "https://rseng.github.io/software/api/repos/github/brandon-rhodes/python-jplephem"}, {"uid": "github/SoFiA-Admin/SoFiA-2", "html_url": "https://rseng.github.io/software/repository/github/SoFiA-Admin/SoFiA-2", "api_url": "https://rseng.github.io/software/api/repos/github/SoFiA-Admin/SoFiA-2"}, {"uid": "github/HDFGroup/hdf5", "html_url": "https://rseng.github.io/software/repository/github/HDFGroup/hdf5", "api_url": "https://rseng.github.io/software/api/repos/github/HDFGroup/hdf5"}, {"uid": "github/PacificBiosciences/pbcore", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcore", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcore"}, {"uid": "github/PacificBiosciences/kineticsTools", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/kineticsTools", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/kineticsTools"}, {"uid": "github/PacificBiosciences/IsoSeq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/IsoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/IsoSeq"}, {"uid": "github/PacificBiosciences/minorseq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/minorseq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/minorseq"}, {"uid": "github/PacificBiosciences/pbbioconda", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbioconda", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbioconda"}, {"uid": "github/PacificBiosciences/pbcopper", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcopper", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcopper"}, {"uid": "github/PacificBiosciences/pbbam", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbam", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbam"}, {"uid": "github/PacificBiosciences/blasr", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/blasr"}, {"uid": "github/PacificBiosciences/HiPhase", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/HiPhase", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/HiPhase"}, {"uid": "github/PacificBiosciences/pbalign", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbalign", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbalign"}, {"uid": "github/PacificBiosciences/pbmm2", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbmm2", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbmm2"}, {"uid": "github/PacificBiosciences/FALCON", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/FALCON", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/FALCON"}] +[{"uid": "github/fairdataihub/SPARClink", "html_url": "https://rseng.github.io/software/repository/github/fairdataihub/SPARClink", "api_url": "https://rseng.github.io/software/api/repos/github/fairdataihub/SPARClink"}, {"uid": "github/nansencenter/DAPPER", "html_url": "https://rseng.github.io/software/repository/github/nansencenter/DAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/nansencenter/DAPPER"}, {"uid": "github/jorittmo/singcar", "html_url": "https://rseng.github.io/software/repository/github/jorittmo/singcar", "api_url": "https://rseng.github.io/software/api/repos/github/jorittmo/singcar"}, {"uid": "github/oxpig/ImmuneBuilder", "html_url": "https://rseng.github.io/software/repository/github/oxpig/ImmuneBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/oxpig/ImmuneBuilder"}, {"uid": "github/sjforeman/bskit", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/bskit", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/bskit"}, {"uid": "github/sjforeman/StringFast", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/StringFast", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/StringFast"}, {"uid": "github/alexander-mead/HMcode", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/HMcode", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/HMcode"}, {"uid": "github/alexander-mead/collapse", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/collapse", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/collapse"}, {"uid": "github/alexander-mead/pyhalomodel", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/pyhalomodel", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/pyhalomodel"}, {"uid": "github/range-et/PGL", "html_url": "https://rseng.github.io/software/repository/github/range-et/PGL", "api_url": "https://rseng.github.io/software/api/repos/github/range-et/PGL"}, {"uid": "github/JixingGE/GGCHEMPY", "html_url": "https://rseng.github.io/software/repository/github/JixingGE/GGCHEMPY", "api_url": "https://rseng.github.io/software/api/repos/github/JixingGE/GGCHEMPY"}, {"uid": "github/andreyshabalin/TwinEQTL", "html_url": "https://rseng.github.io/software/repository/github/andreyshabalin/TwinEQTL", "api_url": "https://rseng.github.io/software/api/repos/github/andreyshabalin/TwinEQTL"}, {"uid": "github/myrafproject/myrafproject", "html_url": "https://rseng.github.io/software/repository/github/myrafproject/myrafproject", "api_url": "https://rseng.github.io/software/api/repos/github/myrafproject/myrafproject"}, {"uid": "github/mneeleman/qubefit", "html_url": "https://rseng.github.io/software/repository/github/mneeleman/qubefit", "api_url": "https://rseng.github.io/software/api/repos/github/mneeleman/qubefit"}, {"uid": "github/Hoohm/CITE-seq-Count", "html_url": "https://rseng.github.io/software/repository/github/Hoohm/CITE-seq-Count", "api_url": "https://rseng.github.io/software/api/repos/github/Hoohm/CITE-seq-Count"}, {"uid": "github/mlhutchins/LWPC", "html_url": "https://rseng.github.io/software/repository/github/mlhutchins/LWPC", "api_url": "https://rseng.github.io/software/api/repos/github/mlhutchins/LWPC"}, {"uid": "github/kjschmidlab/GGoutlieR", "html_url": "https://rseng.github.io/software/repository/github/kjschmidlab/GGoutlieR", "api_url": "https://rseng.github.io/software/api/repos/github/kjschmidlab/GGoutlieR"}, {"uid": "github/akikuno/cstag", "html_url": "https://rseng.github.io/software/repository/github/akikuno/cstag", "api_url": "https://rseng.github.io/software/api/repos/github/akikuno/cstag"}, {"uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "html_url": "https://rseng.github.io/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "api_url": "https://rseng.github.io/software/api/repos/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids"}, {"uid": "github/cpinte/casa_cube", "html_url": "https://rseng.github.io/software/repository/github/cpinte/casa_cube", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/casa_cube"}, {"uid": "github/cpinte/mcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/mcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/mcfost"}, {"uid": "github/cpinte/pymcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/pymcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/pymcfost"}, {"uid": "github/MegaMorph/galapagos-c", "html_url": "https://rseng.github.io/software/repository/github/MegaMorph/galapagos-c", "api_url": "https://rseng.github.io/software/api/repos/github/MegaMorph/galapagos-c"}, {"uid": "github/shihyuntang/igrins_rv", "html_url": "https://rseng.github.io/software/repository/github/shihyuntang/igrins_rv", "api_url": "https://rseng.github.io/software/api/repos/github/shihyuntang/igrins_rv"}, {"uid": "github/Arpitk1001/RotCurveTool", "html_url": "https://rseng.github.io/software/repository/github/Arpitk1001/RotCurveTool", "api_url": "https://rseng.github.io/software/api/repos/github/Arpitk1001/RotCurveTool"}, {"uid": "github/torognes/vsearch", "html_url": "https://rseng.github.io/software/repository/github/torognes/vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/vsearch"}, {"uid": "github/torognes/swarm", "html_url": "https://rseng.github.io/software/repository/github/torognes/swarm", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/swarm"}, {"uid": "github/kavir1698/EvoDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/kavir1698/EvoDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kavir1698/EvoDynamics.jl"}, {"uid": "github/mc-imperial/jfs", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/jfs", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/jfs"}, {"uid": "github/mc-imperial/multicore-test-harness", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/multicore-test-harness", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/multicore-test-harness"}, {"uid": "github/mc-imperial/gpuverify", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/gpuverify", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/gpuverify"}, {"uid": "github/DSIMB/medusa", "html_url": "https://rseng.github.io/software/repository/github/DSIMB/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/DSIMB/medusa"}, {"uid": "github/santeripuranen/SpydrPick", "html_url": "https://rseng.github.io/software/repository/github/santeripuranen/SpydrPick", "api_url": "https://rseng.github.io/software/api/repos/github/santeripuranen/SpydrPick"}, {"uid": "github/wesleyburr/subMaldi", "html_url": "https://rseng.github.io/software/repository/github/wesleyburr/subMaldi", "api_url": "https://rseng.github.io/software/api/repos/github/wesleyburr/subMaldi"}, {"uid": "github/michaelhb/superplot", "html_url": "https://rseng.github.io/software/repository/github/michaelhb/superplot", "api_url": "https://rseng.github.io/software/api/repos/github/michaelhb/superplot"}, {"uid": "github/MADHATdm/MADHAT", "html_url": "https://rseng.github.io/software/repository/github/MADHATdm/MADHAT", "api_url": "https://rseng.github.io/software/api/repos/github/MADHATdm/MADHAT"}, {"uid": "github/orcasgit/python-fitbit", "html_url": "https://rseng.github.io/software/repository/github/orcasgit/python-fitbit", "api_url": "https://rseng.github.io/software/api/repos/github/orcasgit/python-fitbit"}, {"uid": "github/bempp/kifmm", "html_url": "https://rseng.github.io/software/repository/github/bempp/kifmm", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/kifmm"}, {"uid": "github/bempp/bempp-cl", "html_url": "https://rseng.github.io/software/repository/github/bempp/bempp-cl", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/bempp-cl"}, {"uid": "github/jackmwolf/tehtuner", "html_url": "https://rseng.github.io/software/repository/github/jackmwolf/tehtuner", "api_url": "https://rseng.github.io/software/api/repos/github/jackmwolf/tehtuner"}, {"uid": "github/projectcuisines/thai_trilogy_code", "html_url": "https://rseng.github.io/software/repository/github/projectcuisines/thai_trilogy_code", "api_url": "https://rseng.github.io/software/api/repos/github/projectcuisines/thai_trilogy_code"}, {"uid": "github/JiangFangzhou/SIDM", "html_url": "https://rseng.github.io/software/repository/github/JiangFangzhou/SIDM", "api_url": "https://rseng.github.io/software/api/repos/github/JiangFangzhou/SIDM"}, {"uid": "github/mxwalbert/cohesivm", "html_url": "https://rseng.github.io/software/repository/github/mxwalbert/cohesivm", "api_url": "https://rseng.github.io/software/api/repos/github/mxwalbert/cohesivm"}, {"uid": "github/nbisweden/MrBayes", "html_url": "https://rseng.github.io/software/repository/github/nbisweden/MrBayes", "api_url": "https://rseng.github.io/software/api/repos/github/nbisweden/MrBayes"}, {"uid": "github/NASA-Planetary-Science/Pade-disk-code", "html_url": "https://rseng.github.io/software/repository/github/NASA-Planetary-Science/Pade-disk-code", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-Planetary-Science/Pade-disk-code"}, {"uid": "github/CMakePP/CMakePPLang", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMakePPLang", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMakePPLang"}, {"uid": "github/CMakePP/CMinx", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMinx", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMinx"}, {"uid": "github/tanner-trickle/EXCEED-DM", "html_url": "https://rseng.github.io/software/repository/github/tanner-trickle/EXCEED-DM", "api_url": "https://rseng.github.io/software/api/repos/github/tanner-trickle/EXCEED-DM"}, {"uid": "github/RosettaCommons/RFDesign", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RFDesign", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RFDesign"}, {"uid": "github/RosettaCommons/RoseTTAFold", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RoseTTAFold", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RoseTTAFold"}, {"uid": "github/genai-impact/ecologits", "html_url": "https://rseng.github.io/software/repository/github/genai-impact/ecologits", "api_url": "https://rseng.github.io/software/api/repos/github/genai-impact/ecologits"}, {"uid": "github/rice-solar-physics/HYDRAD", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/HYDRAD", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/HYDRAD"}, {"uid": "github/rice-solar-physics/EBTEL", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/EBTEL", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/EBTEL"}, {"uid": "github/mathjax/MathJax", "html_url": "https://rseng.github.io/software/repository/github/mathjax/MathJax", "api_url": "https://rseng.github.io/software/api/repos/github/mathjax/MathJax"}, {"uid": "github/bd-j/sedpy", "html_url": "https://rseng.github.io/software/repository/github/bd-j/sedpy", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/sedpy"}, {"uid": "github/bd-j/prospector", "html_url": "https://rseng.github.io/software/repository/github/bd-j/prospector", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/prospector"}, {"uid": "github/bd-j/forcepho", "html_url": "https://rseng.github.io/software/repository/github/bd-j/forcepho", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/forcepho"}, {"uid": "github/stevenweaver/seqcomplexity", "html_url": "https://rseng.github.io/software/repository/github/stevenweaver/seqcomplexity", "api_url": "https://rseng.github.io/software/api/repos/github/stevenweaver/seqcomplexity"}, {"uid": "github/zhangjunpeng411/Scan", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/Scan", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/Scan"}, {"uid": "github/zhangjunpeng411/SCOM", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/SCOM", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/SCOM"}, {"uid": "github/MMV-Lab/mmv_im2im", "html_url": "https://rseng.github.io/software/repository/github/MMV-Lab/mmv_im2im", "api_url": "https://rseng.github.io/software/api/repos/github/MMV-Lab/mmv_im2im"}, {"uid": "github/AstrobioMike/GToTree", "html_url": "https://rseng.github.io/software/repository/github/AstrobioMike/GToTree", "api_url": "https://rseng.github.io/software/api/repos/github/AstrobioMike/GToTree"}, {"uid": "github/cmgcds/fastvpinns", "html_url": "https://rseng.github.io/software/repository/github/cmgcds/fastvpinns", "api_url": "https://rseng.github.io/software/api/repos/github/cmgcds/fastvpinns"}, {"uid": "github/Starfish-develop/Starfish", "html_url": "https://rseng.github.io/software/repository/github/Starfish-develop/Starfish", "api_url": "https://rseng.github.io/software/api/repos/github/Starfish-develop/Starfish"}, {"uid": "github/AninaTimmermann/ECCOplanets", "html_url": "https://rseng.github.io/software/repository/github/AninaTimmermann/ECCOplanets", "api_url": "https://rseng.github.io/software/api/repos/github/AninaTimmermann/ECCOplanets"}, {"uid": "github/yangfangs/KPP", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/KPP", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/KPP"}, {"uid": "github/yangfangs/test_GFICLEE", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/test_GFICLEE", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/test_GFICLEE"}, {"uid": "github/retostauffer/python-colorspace", "html_url": "https://rseng.github.io/software/repository/github/retostauffer/python-colorspace", "api_url": "https://rseng.github.io/software/api/repos/github/retostauffer/python-colorspace"}, {"uid": "github/pysam-developers/pysam", "html_url": "https://rseng.github.io/software/repository/github/pysam-developers/pysam", "api_url": "https://rseng.github.io/software/api/repos/github/pysam-developers/pysam"}, {"uid": "github/christopherburke/tess-point", "html_url": "https://rseng.github.io/software/repository/github/christopherburke/tess-point", "api_url": "https://rseng.github.io/software/api/repos/github/christopherburke/tess-point"}, {"uid": "github/MaayanLab/signature-commons-ui", "html_url": "https://rseng.github.io/software/repository/github/MaayanLab/signature-commons-ui", "api_url": "https://rseng.github.io/software/api/repos/github/MaayanLab/signature-commons-ui"}, {"uid": "github/staphopia/staphopia-paper", "html_url": "https://rseng.github.io/software/repository/github/staphopia/staphopia-paper", "api_url": "https://rseng.github.io/software/api/repos/github/staphopia/staphopia-paper"}, {"uid": "github/DESI-UR/VAST", "html_url": "https://rseng.github.io/software/repository/github/DESI-UR/VAST", "api_url": "https://rseng.github.io/software/api/repos/github/DESI-UR/VAST"}, {"uid": "github/bbbbbbzhou/MDPET", "html_url": "https://rseng.github.io/software/repository/github/bbbbbbzhou/MDPET", "api_url": "https://rseng.github.io/software/api/repos/github/bbbbbbzhou/MDPET"}, {"uid": "github/EMSL-Computing/Pore2Chip", "html_url": "https://rseng.github.io/software/repository/github/EMSL-Computing/Pore2Chip", "api_url": "https://rseng.github.io/software/api/repos/github/EMSL-Computing/Pore2Chip"}, {"uid": "github/wmglab-duke/ascent", "html_url": "https://rseng.github.io/software/repository/github/wmglab-duke/ascent", "api_url": "https://rseng.github.io/software/api/repos/github/wmglab-duke/ascent"}, {"uid": "github/keatonb/Pyriod", "html_url": "https://rseng.github.io/software/repository/github/keatonb/Pyriod", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/Pyriod"}, {"uid": "github/keatonb/TESS_PRF", "html_url": "https://rseng.github.io/software/repository/github/keatonb/TESS_PRF", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/TESS_PRF"}, {"uid": "github/casaluca/bolometric-corrections", "html_url": "https://rseng.github.io/software/repository/github/casaluca/bolometric-corrections", "api_url": "https://rseng.github.io/software/api/repos/github/casaluca/bolometric-corrections"}, {"uid": "github/circuitgraph/circuitgraph", "html_url": "https://rseng.github.io/software/repository/github/circuitgraph/circuitgraph", "api_url": "https://rseng.github.io/software/api/repos/github/circuitgraph/circuitgraph"}, {"uid": "github/ideasrule/platon", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/platon", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/platon"}, {"uid": "github/ideasrule/pyTPCI", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/pyTPCI", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/pyTPCI"}, {"uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", "html_url": "https://rseng.github.io/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", "api_url": "https://rseng.github.io/software/api/repos/github/joergbuchwald/joss_ogs6py_VTUinterface"}, {"uid": "github/markheckmann/OpenRepGrid.ic", "html_url": "https://rseng.github.io/software/repository/github/markheckmann/OpenRepGrid.ic", "api_url": "https://rseng.github.io/software/api/repos/github/markheckmann/OpenRepGrid.ic"}, {"uid": "github/Extraweich/homopy", "html_url": "https://rseng.github.io/software/repository/github/Extraweich/homopy", "api_url": "https://rseng.github.io/software/api/repos/github/Extraweich/homopy"}, {"uid": "github/thomgrand/fim-python", "html_url": "https://rseng.github.io/software/repository/github/thomgrand/fim-python", "api_url": "https://rseng.github.io/software/api/repos/github/thomgrand/fim-python"}, {"uid": "github/databio/GenomicDistributions", "html_url": "https://rseng.github.io/software/repository/github/databio/GenomicDistributions", "api_url": "https://rseng.github.io/software/api/repos/github/databio/GenomicDistributions"}, {"uid": "github/PyFstat/PyFstat", "html_url": "https://rseng.github.io/software/repository/github/PyFstat/PyFstat", "api_url": "https://rseng.github.io/software/api/repos/github/PyFstat/PyFstat"}, {"uid": "github/EdgeVPNio/evio", "html_url": "https://rseng.github.io/software/repository/github/EdgeVPNio/evio", "api_url": "https://rseng.github.io/software/api/repos/github/EdgeVPNio/evio"}, {"uid": "github/SamDuffield/bmm", "html_url": "https://rseng.github.io/software/repository/github/SamDuffield/bmm", "api_url": "https://rseng.github.io/software/api/repos/github/SamDuffield/bmm"}, {"uid": "github/fmihpc/vlasiator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/vlasiator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/vlasiator"}, {"uid": "github/fmihpc/analysator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/analysator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/analysator"}, {"uid": "github/jet-net/JetNet", "html_url": "https://rseng.github.io/software/repository/github/jet-net/JetNet", "api_url": "https://rseng.github.io/software/api/repos/github/jet-net/JetNet"}, {"uid": "github/druglogics/pydruglogics", "html_url": "https://rseng.github.io/software/repository/github/druglogics/pydruglogics", "api_url": "https://rseng.github.io/software/api/repos/github/druglogics/pydruglogics"}, {"uid": "github/seqan/flexbar", "html_url": "https://rseng.github.io/software/repository/github/seqan/flexbar", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/flexbar"}, {"uid": "github/seqan/lambda", "html_url": "https://rseng.github.io/software/repository/github/seqan/lambda", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lambda"}, {"uid": "github/seqan/lara", "html_url": "https://rseng.github.io/software/repository/github/seqan/lara", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lara"}, {"uid": "github/timoast/signac", "html_url": "https://rseng.github.io/software/repository/github/timoast/signac", "api_url": "https://rseng.github.io/software/api/repos/github/timoast/signac"}, {"uid": "github/cov-ert/gofasta", "html_url": "https://rseng.github.io/software/repository/github/cov-ert/gofasta", "api_url": "https://rseng.github.io/software/api/repos/github/cov-ert/gofasta"}, {"uid": "github/Starlink/starlink", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starlink", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starlink"}, {"uid": "github/Starlink/aspic", "html_url": "https://rseng.github.io/software/repository/github/Starlink/aspic", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/aspic"}, {"uid": "github/Starlink/hds-v5", "html_url": "https://rseng.github.io/software/repository/github/Starlink/hds-v5", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/hds-v5"}, {"uid": "github/Starlink/pal", "html_url": "https://rseng.github.io/software/repository/github/Starlink/pal", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/pal"}, {"uid": "github/Starlink/palpy", "html_url": "https://rseng.github.io/software/repository/github/Starlink/palpy", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/palpy"}, {"uid": "github/Starlink/perl-Starlink-Autoastrom", "html_url": "https://rseng.github.io/software/repository/github/Starlink/perl-Starlink-Autoastrom", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/perl-Starlink-Autoastrom"}, {"uid": "github/Starlink/ORAC-DR", "html_url": "https://rseng.github.io/software/repository/github/Starlink/ORAC-DR", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/ORAC-DR"}, {"uid": "github/Starlink/starjava", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starjava", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starjava"}, {"uid": "github/daiqile96/OTTERS_paper", "html_url": "https://rseng.github.io/software/repository/github/daiqile96/OTTERS_paper", "api_url": "https://rseng.github.io/software/api/repos/github/daiqile96/OTTERS_paper"}, {"uid": "github/WMD-group/CarrierCapture.jl", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/CarrierCapture.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/CarrierCapture.jl"}, {"uid": "github/WMD-group/hybrid-perovskites", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/hybrid-perovskites", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/hybrid-perovskites"}, {"uid": "github/WMD-group/SMACT", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/SMACT", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/SMACT"}, {"uid": "github/WMD-group/StarryNight", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/StarryNight", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/StarryNight"}, {"uid": "github/WMD-group/MacroDensity", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/MacroDensity", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/MacroDensity"}, {"uid": "github/WMD-group/Eris", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/Eris", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/Eris"}, {"uid": "github/adbar/htmldate", "html_url": "https://rseng.github.io/software/repository/github/adbar/htmldate", "api_url": "https://rseng.github.io/software/api/repos/github/adbar/htmldate"}, {"uid": "github/dansarie/sboxgates", "html_url": "https://rseng.github.io/software/repository/github/dansarie/sboxgates", "api_url": "https://rseng.github.io/software/api/repos/github/dansarie/sboxgates"}, {"uid": "github/cbirdferrer/collatrix", "html_url": "https://rseng.github.io/software/repository/github/cbirdferrer/collatrix", "api_url": "https://rseng.github.io/software/api/repos/github/cbirdferrer/collatrix"}, {"uid": "github/fmicompbio/ez_zarr", "html_url": "https://rseng.github.io/software/repository/github/fmicompbio/ez_zarr", "api_url": "https://rseng.github.io/software/api/repos/github/fmicompbio/ez_zarr"}, {"uid": "github/OpenEnergyPlatform/open-MaStR", "html_url": "https://rseng.github.io/software/repository/github/OpenEnergyPlatform/open-MaStR", "api_url": "https://rseng.github.io/software/api/repos/github/OpenEnergyPlatform/open-MaStR"}, {"uid": "github/pyplati/platipy", "html_url": "https://rseng.github.io/software/repository/github/pyplati/platipy", "api_url": "https://rseng.github.io/software/api/repos/github/pyplati/platipy"}, {"uid": "github/rvandewater/ReciPies", "html_url": "https://rseng.github.io/software/repository/github/rvandewater/ReciPies", "api_url": "https://rseng.github.io/software/api/repos/github/rvandewater/ReciPies"}, {"uid": "github/kokron/anzu", "html_url": "https://rseng.github.io/software/repository/github/kokron/anzu", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/anzu"}, {"uid": "github/kokron/skyLine", "html_url": "https://rseng.github.io/software/repository/github/kokron/skyLine", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/skyLine"}, {"uid": "github/CSi-Studio/G-Aligner", "html_url": "https://rseng.github.io/software/repository/github/CSi-Studio/G-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/CSi-Studio/G-Aligner"}, {"uid": "github/EdanRein/pyPplusS", "html_url": "https://rseng.github.io/software/repository/github/EdanRein/pyPplusS", "api_url": "https://rseng.github.io/software/api/repos/github/EdanRein/pyPplusS"}, {"uid": "github/yair111/AnalyticLC", "html_url": "https://rseng.github.io/software/repository/github/yair111/AnalyticLC", "api_url": "https://rseng.github.io/software/api/repos/github/yair111/AnalyticLC"}, {"uid": "github/gymreklab/GangSTR", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/GangSTR", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/GangSTR"}, {"uid": "github/gymreklab/chips", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/chips", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/chips"}, {"uid": "github/blobtoolkit/viewer", "html_url": "https://rseng.github.io/software/repository/github/blobtoolkit/viewer", "api_url": "https://rseng.github.io/software/api/repos/github/blobtoolkit/viewer"}, {"uid": "github/kristiantcho/flashcurve", "html_url": "https://rseng.github.io/software/repository/github/kristiantcho/flashcurve", "api_url": "https://rseng.github.io/software/api/repos/github/kristiantcho/flashcurve"}, {"uid": "github/miRTop/mirtop", "html_url": "https://rseng.github.io/software/repository/github/miRTop/mirtop", "api_url": "https://rseng.github.io/software/api/repos/github/miRTop/mirtop"}, {"uid": "github/ejikeugba/serp", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/serp", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/serp"}, {"uid": "github/ejikeugba/gofcat", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/gofcat", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/gofcat"}, {"uid": "github/m-shahbaz-kharal/LiGuard-JOSS", "html_url": "https://rseng.github.io/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", "api_url": "https://rseng.github.io/software/api/repos/github/m-shahbaz-kharal/LiGuard-JOSS"}, {"uid": "github/danhey/maelstrom", "html_url": "https://rseng.github.io/software/repository/github/danhey/maelstrom", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/maelstrom"}, {"uid": "github/danhey/echelle", "html_url": "https://rseng.github.io/software/repository/github/danhey/echelle", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/echelle"}, {"uid": "github/david-deboer/radiobear", "html_url": "https://rseng.github.io/software/repository/github/david-deboer/radiobear", "api_url": "https://rseng.github.io/software/api/repos/github/david-deboer/radiobear"}, {"uid": "github/astrorama/sourcextractorplusplus", "html_url": "https://rseng.github.io/software/repository/github/astrorama/sourcextractorplusplus", "api_url": "https://rseng.github.io/software/api/repos/github/astrorama/sourcextractorplusplus"}, {"uid": "github/nliulab/HRnV-Calc", "html_url": "https://rseng.github.io/software/repository/github/nliulab/HRnV-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/nliulab/HRnV-Calc"}, {"uid": "github/c-white/blacklight", "html_url": "https://rseng.github.io/software/repository/github/c-white/blacklight", "api_url": "https://rseng.github.io/software/api/repos/github/c-white/blacklight"}, {"uid": "github/JieweiHuang/Coport", "html_url": "https://rseng.github.io/software/repository/github/JieweiHuang/Coport", "api_url": "https://rseng.github.io/software/api/repos/github/JieweiHuang/Coport"}, {"uid": "github/iAART/aart", "html_url": "https://rseng.github.io/software/repository/github/iAART/aart", "api_url": "https://rseng.github.io/software/api/repos/github/iAART/aart"}, {"uid": "github/snad-space/coniferest", "html_url": "https://rseng.github.io/software/repository/github/snad-space/coniferest", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/coniferest"}, {"uid": "github/snad-space/ztf-viewer", "html_url": "https://rseng.github.io/software/repository/github/snad-space/ztf-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/ztf-viewer"}, {"uid": "github/snad-space/zwad", "html_url": "https://rseng.github.io/software/repository/github/snad-space/zwad", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/zwad"}, {"uid": "github/klevis-a/kinematics-vis", "html_url": "https://rseng.github.io/software/repository/github/klevis-a/kinematics-vis", "api_url": "https://rseng.github.io/software/api/repos/github/klevis-a/kinematics-vis"}, {"uid": "github/xcompact3d/Incompact3d", "html_url": "https://rseng.github.io/software/repository/github/xcompact3d/Incompact3d", "api_url": "https://rseng.github.io/software/api/repos/github/xcompact3d/Incompact3d"}, {"uid": "github/chenwuperth/rgz_rcnn", "html_url": "https://rseng.github.io/software/repository/github/chenwuperth/rgz_rcnn", "api_url": "https://rseng.github.io/software/api/repos/github/chenwuperth/rgz_rcnn"}, {"uid": "github/YosefLab/scvi-tools", "html_url": "https://rseng.github.io/software/repository/github/YosefLab/scvi-tools", "api_url": "https://rseng.github.io/software/api/repos/github/YosefLab/scvi-tools"}, {"uid": "github/PeterBartram/TES", "html_url": "https://rseng.github.io/software/repository/github/PeterBartram/TES", "api_url": "https://rseng.github.io/software/api/repos/github/PeterBartram/TES"}, {"uid": "github/sherpa-deproject/deproject", "html_url": "https://rseng.github.io/software/repository/github/sherpa-deproject/deproject", "api_url": "https://rseng.github.io/software/api/repos/github/sherpa-deproject/deproject"}, {"uid": "github/adithirgis/pollucheck", "html_url": "https://rseng.github.io/software/repository/github/adithirgis/pollucheck", "api_url": "https://rseng.github.io/software/api/repos/github/adithirgis/pollucheck"}, {"uid": "github/1313e/PRISM", "html_url": "https://rseng.github.io/software/repository/github/1313e/PRISM", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/PRISM"}, {"uid": "github/1313e/CMasher", "html_url": "https://rseng.github.io/software/repository/github/1313e/CMasher", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/CMasher"}, {"uid": "github/SciLifeLab/TIDDIT", "html_url": "https://rseng.github.io/software/repository/github/SciLifeLab/TIDDIT", "api_url": "https://rseng.github.io/software/api/repos/github/SciLifeLab/TIDDIT"}, {"uid": "github/najoshi/sickle", "html_url": "https://rseng.github.io/software/repository/github/najoshi/sickle", "api_url": "https://rseng.github.io/software/api/repos/github/najoshi/sickle"}, {"uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", "html_url": "https://rseng.github.io/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", "api_url": "https://rseng.github.io/software/api/repos/github/BlackHolePerturbationToolkit/KerrGeoPy"}, {"uid": "github/meenakshi-kushwaha/mmaqshiny", "html_url": "https://rseng.github.io/software/repository/github/meenakshi-kushwaha/mmaqshiny", "api_url": "https://rseng.github.io/software/api/repos/github/meenakshi-kushwaha/mmaqshiny"}, {"uid": "github/asntech/intervene", "html_url": "https://rseng.github.io/software/repository/github/asntech/intervene", "api_url": "https://rseng.github.io/software/api/repos/github/asntech/intervene"}, {"uid": "github/ProSolo/prosolo", "html_url": "https://rseng.github.io/software/repository/github/ProSolo/prosolo", "api_url": "https://rseng.github.io/software/api/repos/github/ProSolo/prosolo"}, {"uid": "github/XuhanLiu/DrugEx", "html_url": "https://rseng.github.io/software/repository/github/XuhanLiu/DrugEx", "api_url": "https://rseng.github.io/software/api/repos/github/XuhanLiu/DrugEx"}, {"uid": "github/lucaskorol21/GO-RXR", "html_url": "https://rseng.github.io/software/repository/github/lucaskorol21/GO-RXR", "api_url": "https://rseng.github.io/software/api/repos/github/lucaskorol21/GO-RXR"}, {"uid": "github/muctadir/lama", "html_url": "https://rseng.github.io/software/repository/github/muctadir/lama", "api_url": "https://rseng.github.io/software/api/repos/github/muctadir/lama"}, {"uid": "github/ECSHackWeek/impedance.py", "html_url": "https://rseng.github.io/software/repository/github/ECSHackWeek/impedance.py", "api_url": "https://rseng.github.io/software/api/repos/github/ECSHackWeek/impedance.py"}, {"uid": "github/mscroggs/symfem", "html_url": "https://rseng.github.io/software/repository/github/mscroggs/symfem", "api_url": "https://rseng.github.io/software/api/repos/github/mscroggs/symfem"}, {"uid": "github/hjozwiak-umk/bigos_h2he", "html_url": "https://rseng.github.io/software/repository/github/hjozwiak-umk/bigos_h2he", "api_url": "https://rseng.github.io/software/api/repos/github/hjozwiak-umk/bigos_h2he"}, {"uid": "github/SotaYoshida/NuclearToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/SotaYoshida/NuclearToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SotaYoshida/NuclearToolkit.jl"}, {"uid": "github/cvjena/JeFaPaTo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/JeFaPaTo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/JeFaPaTo"}, {"uid": "github/cvjena/freestylo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/freestylo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/freestylo"}, {"uid": "github/mlinderm/npsv", "html_url": "https://rseng.github.io/software/repository/github/mlinderm/npsv", "api_url": "https://rseng.github.io/software/api/repos/github/mlinderm/npsv"}, {"uid": "github/thomasdenecker/START-R", "html_url": "https://rseng.github.io/software/repository/github/thomasdenecker/START-R", "api_url": "https://rseng.github.io/software/api/repos/github/thomasdenecker/START-R"}, {"uid": "github/mcsiple/mmrefpoints", "html_url": "https://rseng.github.io/software/repository/github/mcsiple/mmrefpoints", "api_url": "https://rseng.github.io/software/api/repos/github/mcsiple/mmrefpoints"}, {"uid": "github/rksyouyou/SASOM-analysis", "html_url": "https://rseng.github.io/software/repository/github/rksyouyou/SASOM-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/rksyouyou/SASOM-analysis"}, {"uid": "github/ACTCollaboration/zCluster", "html_url": "https://rseng.github.io/software/repository/github/ACTCollaboration/zCluster", "api_url": "https://rseng.github.io/software/api/repos/github/ACTCollaboration/zCluster"}, {"uid": "github/labjg/fibmeasure", "html_url": "https://rseng.github.io/software/repository/github/labjg/fibmeasure", "api_url": "https://rseng.github.io/software/api/repos/github/labjg/fibmeasure"}, {"uid": "github/kungfugo/BellDiagonalQudits.jl", "html_url": "https://rseng.github.io/software/repository/github/kungfugo/BellDiagonalQudits.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kungfugo/BellDiagonalQudits.jl"}, {"uid": "github/artis-mcrt/artis", "html_url": "https://rseng.github.io/software/repository/github/artis-mcrt/artis", "api_url": "https://rseng.github.io/software/api/repos/github/artis-mcrt/artis"}, {"uid": "github/brackham/speclib", "html_url": "https://rseng.github.io/software/repository/github/brackham/speclib", "api_url": "https://rseng.github.io/software/api/repos/github/brackham/speclib"}, {"uid": "github/ThibaultFillion/strengths", "html_url": "https://rseng.github.io/software/repository/github/ThibaultFillion/strengths", "api_url": "https://rseng.github.io/software/api/repos/github/ThibaultFillion/strengths"}, {"uid": "github/iterize/tenta", "html_url": "https://rseng.github.io/software/repository/github/iterize/tenta", "api_url": "https://rseng.github.io/software/api/repos/github/iterize/tenta"}, {"uid": "github/CarlosCoba/XookSuut-code", "html_url": "https://rseng.github.io/software/repository/github/CarlosCoba/XookSuut-code", "api_url": "https://rseng.github.io/software/api/repos/github/CarlosCoba/XookSuut-code"}, {"uid": "github/jczarnowski/DeepFactors", "html_url": "https://rseng.github.io/software/repository/github/jczarnowski/DeepFactors", "api_url": "https://rseng.github.io/software/api/repos/github/jczarnowski/DeepFactors"}, {"uid": "github/Singh-Lab/uKIN", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/uKIN", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/uKIN"}, {"uid": "github/Singh-Lab/DeMaSk", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/DeMaSk", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/DeMaSk"}, {"uid": "github/arhstevens/DarkSage", "html_url": "https://rseng.github.io/software/repository/github/arhstevens/DarkSage", "api_url": "https://rseng.github.io/software/api/repos/github/arhstevens/DarkSage"}, {"uid": "github/bio-ontology-research-group/deepgoplus", "html_url": "https://rseng.github.io/software/repository/github/bio-ontology-research-group/deepgoplus", "api_url": "https://rseng.github.io/software/api/repos/github/bio-ontology-research-group/deepgoplus"}, {"uid": "github/zhoulinumass/ML-wPBE", "html_url": "https://rseng.github.io/software/repository/github/zhoulinumass/ML-wPBE", "api_url": "https://rseng.github.io/software/api/repos/github/zhoulinumass/ML-wPBE"}, {"uid": "github/emossoux/LIFELINE", "html_url": "https://rseng.github.io/software/repository/github/emossoux/LIFELINE", "api_url": "https://rseng.github.io/software/api/repos/github/emossoux/LIFELINE"}, {"uid": "github/adrientaudiere/MiscMetabar", "html_url": "https://rseng.github.io/software/repository/github/adrientaudiere/MiscMetabar", "api_url": "https://rseng.github.io/software/api/repos/github/adrientaudiere/MiscMetabar"}, {"uid": "github/Jane110111107/IsoTree", "html_url": "https://rseng.github.io/software/repository/github/Jane110111107/IsoTree", "api_url": "https://rseng.github.io/software/api/repos/github/Jane110111107/IsoTree"}, {"uid": "github/AlexMikes/AutoFunc", "html_url": "https://rseng.github.io/software/repository/github/AlexMikes/AutoFunc", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMikes/AutoFunc"}, {"uid": "github/SpeedyWeather/SpeedyWeather.jl", "html_url": "https://rseng.github.io/software/repository/github/SpeedyWeather/SpeedyWeather.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SpeedyWeather/SpeedyWeather.jl"}, {"uid": "github/PyTomography/slicer_spect_recon", "html_url": "https://rseng.github.io/software/repository/github/PyTomography/slicer_spect_recon", "api_url": "https://rseng.github.io/software/api/repos/github/PyTomography/slicer_spect_recon"}, {"uid": "github/joshjchayes/TransitFit", "html_url": "https://rseng.github.io/software/repository/github/joshjchayes/TransitFit", "api_url": "https://rseng.github.io/software/api/repos/github/joshjchayes/TransitFit"}, {"uid": "github/nivha/three_body_integration", "html_url": "https://rseng.github.io/software/repository/github/nivha/three_body_integration", "api_url": "https://rseng.github.io/software/api/repos/github/nivha/three_body_integration"}, {"uid": "github/PTsolvers/JustRelax.jl", "html_url": "https://rseng.github.io/software/repository/github/PTsolvers/JustRelax.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PTsolvers/JustRelax.jl"}, {"uid": "github/rabrahm/zaspe", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/zaspe", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/zaspe"}, {"uid": "github/rabrahm/ceres", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/ceres", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/ceres"}, {"uid": "github/mischaschirmer/nebular", "html_url": "https://rseng.github.io/software/repository/github/mischaschirmer/nebular", "api_url": "https://rseng.github.io/software/api/repos/github/mischaschirmer/nebular"}, {"uid": "github/pyspeckit/pyspeckit", "html_url": "https://rseng.github.io/software/repository/github/pyspeckit/pyspeckit", "api_url": "https://rseng.github.io/software/api/repos/github/pyspeckit/pyspeckit"}, {"uid": "github/easystats/effectsize", "html_url": "https://rseng.github.io/software/repository/github/easystats/effectsize", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/effectsize"}, {"uid": "github/easystats/modelbased", "html_url": "https://rseng.github.io/software/repository/github/easystats/modelbased", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/modelbased"}, {"uid": "github/easystats/parameters", "html_url": "https://rseng.github.io/software/repository/github/easystats/parameters", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/parameters"}, {"uid": "github/easystats/correlation", "html_url": "https://rseng.github.io/software/repository/github/easystats/correlation", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/correlation"}, {"uid": "github/easystats/performance", "html_url": "https://rseng.github.io/software/repository/github/easystats/performance", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/performance"}, {"uid": "github/STOmics/cs-benchmark", "html_url": "https://rseng.github.io/software/repository/github/STOmics/cs-benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/cs-benchmark"}, {"uid": "github/STOmics/EAGS", "html_url": "https://rseng.github.io/software/repository/github/STOmics/EAGS", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/EAGS"}, {"uid": "github/bessagroup/f3dasm", "html_url": "https://rseng.github.io/software/repository/github/bessagroup/f3dasm", "api_url": "https://rseng.github.io/software/api/repos/github/bessagroup/f3dasm"}, {"uid": "github/sdnjly/WSDL-AD", "html_url": "https://rseng.github.io/software/repository/github/sdnjly/WSDL-AD", "api_url": "https://rseng.github.io/software/api/repos/github/sdnjly/WSDL-AD"}, {"uid": "github/tbisbas/PDFchem", "html_url": "https://rseng.github.io/software/repository/github/tbisbas/PDFchem", "api_url": "https://rseng.github.io/software/api/repos/github/tbisbas/PDFchem"}, {"uid": "github/ArisTr/PyRaTE", "html_url": "https://rseng.github.io/software/repository/github/ArisTr/PyRaTE", "api_url": "https://rseng.github.io/software/api/repos/github/ArisTr/PyRaTE"}, {"uid": "github/jacksund/simmate", "html_url": "https://rseng.github.io/software/repository/github/jacksund/simmate", "api_url": "https://rseng.github.io/software/api/repos/github/jacksund/simmate"}, {"uid": "github/chihchunhsu/smart", "html_url": "https://rseng.github.io/software/repository/github/chihchunhsu/smart", "api_url": "https://rseng.github.io/software/api/repos/github/chihchunhsu/smart"}, {"uid": "github/fcs-analysis/PyScanFCS", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyScanFCS", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyScanFCS"}, {"uid": "github/fcs-analysis/PyCorrFit", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyCorrFit", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyCorrFit"}, {"uid": "github/biocircuits/bioscrape", "html_url": "https://rseng.github.io/software/repository/github/biocircuits/bioscrape", "api_url": "https://rseng.github.io/software/api/repos/github/biocircuits/bioscrape"}, {"uid": "github/abschneider/StrainHub", "html_url": "https://rseng.github.io/software/repository/github/abschneider/StrainHub", "api_url": "https://rseng.github.io/software/api/repos/github/abschneider/StrainHub"}, {"uid": "github/skendrew/midIR_sensitivity", "html_url": "https://rseng.github.io/software/repository/github/skendrew/midIR_sensitivity", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/midIR_sensitivity"}, {"uid": "github/skendrew/milkywayproject_triggering", "html_url": "https://rseng.github.io/software/repository/github/skendrew/milkywayproject_triggering", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/milkywayproject_triggering"}, {"uid": "github/Teichlab/bin2cell", "html_url": "https://rseng.github.io/software/repository/github/Teichlab/bin2cell", "api_url": "https://rseng.github.io/software/api/repos/github/Teichlab/bin2cell"}, {"uid": "github/scipion-em/scipion-em-continuousflex", "html_url": "https://rseng.github.io/software/repository/github/scipion-em/scipion-em-continuousflex", "api_url": "https://rseng.github.io/software/api/repos/github/scipion-em/scipion-em-continuousflex"}, {"uid": "github/Michalychforever/AsPy", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/AsPy", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/AsPy"}, {"uid": "github/Michalychforever/CLASS_LVDM", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/CLASS_LVDM", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/CLASS_LVDM"}, {"uid": "github/DRMacIver/shrinkray", "html_url": "https://rseng.github.io/software/repository/github/DRMacIver/shrinkray", "api_url": "https://rseng.github.io/software/api/repos/github/DRMacIver/shrinkray"}, {"uid": "github/cboursnell/crb-blast", "html_url": "https://rseng.github.io/software/repository/github/cboursnell/crb-blast", "api_url": "https://rseng.github.io/software/api/repos/github/cboursnell/crb-blast"}, {"uid": "github/skyfielders/python-skyfield", "html_url": "https://rseng.github.io/software/repository/github/skyfielders/python-skyfield", "api_url": "https://rseng.github.io/software/api/repos/github/skyfielders/python-skyfield"}, {"uid": "github/maho3/ltu-ili", "html_url": "https://rseng.github.io/software/repository/github/maho3/ltu-ili", "api_url": "https://rseng.github.io/software/api/repos/github/maho3/ltu-ili"}, {"uid": "github/Oftatkofta/cellocity", "html_url": "https://rseng.github.io/software/repository/github/Oftatkofta/cellocity", "api_url": "https://rseng.github.io/software/api/repos/github/Oftatkofta/cellocity"}, {"uid": "github/ropensci-org/roblog", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/roblog", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/roblog"}, {"uid": "github/ropensci-org/rotemplate", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/rotemplate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/rotemplate"}, {"uid": "github/ropensci-org/pkgreviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/pkgreviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/pkgreviewr"}, {"uid": "github/jsobeck/MOOG_SCAT", "html_url": "https://rseng.github.io/software/repository/github/jsobeck/MOOG_SCAT", "api_url": "https://rseng.github.io/software/api/repos/github/jsobeck/MOOG_SCAT"}, {"uid": "github/lnferris/ocean_data_tools", "html_url": "https://rseng.github.io/software/repository/github/lnferris/ocean_data_tools", "api_url": "https://rseng.github.io/software/api/repos/github/lnferris/ocean_data_tools"}, {"uid": "github/nmslib/hnswlib", "html_url": "https://rseng.github.io/software/repository/github/nmslib/hnswlib", "api_url": "https://rseng.github.io/software/api/repos/github/nmslib/hnswlib"}, {"uid": "github/casasglobal-org/psymple", "html_url": "https://rseng.github.io/software/repository/github/casasglobal-org/psymple", "api_url": "https://rseng.github.io/software/api/repos/github/casasglobal-org/psymple"}, {"uid": "github/ropensci/rcol", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcol", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcol"}, {"uid": "github/ropensci/assertr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/assertr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/assertr"}, {"uid": "github/ropensci/ezknitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ezknitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ezknitr"}, {"uid": "github/ropensci/textreuse", "html_url": "https://rseng.github.io/software/repository/github/ropensci/textreuse", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/textreuse"}, {"uid": "github/ropensci/slopes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/slopes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/slopes"}, {"uid": "github/ropensci/prism", "html_url": "https://rseng.github.io/software/repository/github/ropensci/prism", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/prism"}, {"uid": "github/ropensci/tinkr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tinkr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tinkr"}, {"uid": "github/ropensci/pixelclasser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pixelclasser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pixelclasser"}, {"uid": "github/ropensci/rzmq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rzmq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rzmq"}, {"uid": "github/ropensci/binman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/binman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/binman"}, {"uid": "github/ropensci/plater", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plater", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plater"}, {"uid": "github/ropensci/neotoma", "html_url": "https://rseng.github.io/software/repository/github/ropensci/neotoma", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/neotoma"}, {"uid": "github/ropensci/tracerer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tracerer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tracerer"}, {"uid": "github/ropensci/writexl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/writexl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/writexl"}, {"uid": "github/ropensci/pangaear", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pangaear", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pangaear"}, {"uid": "github/ropensci/rcitoid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcitoid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcitoid"}, {"uid": "github/ropensci/taxview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxview"}, {"uid": "github/ropensci/onekp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/onekp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/onekp"}, {"uid": "github/ropensci/antanym", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antanym", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antanym"}, {"uid": "github/ropensci/mapscanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapscanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapscanner"}, {"uid": "github/ropensci/jagstargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jagstargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jagstargets"}, {"uid": "github/ropensci/sofa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/sofa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/sofa"}, {"uid": "github/ropensci/workloopR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/workloopR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/workloopR"}, {"uid": "github/ropensci/rdhs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdhs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdhs"}, {"uid": "github/ropensci/taxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxa"}, {"uid": "github/ropensci/fingertipsR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fingertipsR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fingertipsR"}, {"uid": "github/ropensci/zbank", "html_url": "https://rseng.github.io/software/repository/github/ropensci/zbank", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/zbank"}, {"uid": "github/ropensci/rrricanes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanes"}, {"uid": "github/ropensci/rvertnet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rvertnet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rvertnet"}, {"uid": "github/ropensci/unifir", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unifir", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unifir"}, {"uid": "github/ropensci/grainchanger", "html_url": "https://rseng.github.io/software/repository/github/ropensci/grainchanger", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/grainchanger"}, {"uid": "github/ropensci/gitignore", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gitignore", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gitignore"}, {"uid": "github/ropensci/treestartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treestartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treestartr"}, {"uid": "github/ropensci/RefManageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RefManageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RefManageR"}, {"uid": "github/ropensci/stantargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stantargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stantargets"}, {"uid": "github/ropensci/tabulizer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tabulizer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tabulizer"}, {"uid": "github/ropensci/jqr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jqr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jqr"}, {"uid": "github/ropensci/europepmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/europepmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/europepmc"}, {"uid": "github/ropensci/rnaturalearthdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthdata"}, {"uid": "github/ropensci/bold", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bold", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bold"}, {"uid": "github/ropensci/treedata.table", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treedata.table", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treedata.table"}, {"uid": "github/ropensci/ghql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ghql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ghql"}, {"uid": "github/ropensci/rsvg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsvg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsvg"}, {"uid": "github/ropensci/geonames", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geonames", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geonames"}, {"uid": "github/ropensci/rdataretriever", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdataretriever", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdataretriever"}, {"uid": "github/ropensci/rsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsat"}, {"uid": "github/ropensci/beautier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beautier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beautier"}, {"uid": "github/ropensci/epubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/epubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/epubr"}, {"uid": "github/ropensci/cchecks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cchecks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cchecks"}, {"uid": "github/ropensci/osmapiR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmapiR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmapiR"}, {"uid": "github/ropensci/treebase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treebase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treebase"}, {"uid": "github/ropensci/graphql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/graphql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/graphql"}, {"uid": "github/ropensci/mauricer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mauricer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mauricer"}, {"uid": "github/ropensci/paleobioDB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/paleobioDB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/paleobioDB"}, {"uid": "github/ropensci/addressable", "html_url": "https://rseng.github.io/software/repository/github/ropensci/addressable", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/addressable"}, {"uid": "github/ropensci/targets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/targets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/targets"}, {"uid": "github/ropensci/coder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/coder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/coder"}, {"uid": "github/ropensci/dbparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbparser"}, {"uid": "github/ropensci/taxize", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxize", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxize"}, {"uid": "github/ropensci/rppo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rppo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rppo"}, {"uid": "github/ropensci/microdemic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/microdemic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/microdemic"}, {"uid": "github/ropensci/dbhydroR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbhydroR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbhydroR"}, {"uid": "github/ropensci/RNeXML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RNeXML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RNeXML"}, {"uid": "github/ropensci/cld2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld2"}, {"uid": "github/ropensci/rnaturalearth", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearth", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearth"}, {"uid": "github/ropensci/gutenbergr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gutenbergr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gutenbergr"}, {"uid": "github/ropensci/GSODR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/GSODR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/GSODR"}, {"uid": "github/ropensci/tidyhydat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyhydat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyhydat"}, {"uid": "github/ropensci/rcites", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcites", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcites"}, {"uid": "github/ropensci/osmextract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmextract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmextract"}, {"uid": "github/ropensci/geojsonlint", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonlint", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonlint"}, {"uid": "github/ropensci/mctq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mctq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mctq"}, {"uid": "github/ropensci/traits", "html_url": "https://rseng.github.io/software/repository/github/ropensci/traits", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/traits"}, {"uid": "github/ropensci/phylogram", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylogram", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylogram"}, {"uid": "github/ropensci/helminthR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/helminthR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/helminthR"}, {"uid": "github/ropensci/tarchetypes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tarchetypes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tarchetypes"}, {"uid": "github/ropensci/rplos", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rplos", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rplos"}, {"uid": "github/ropensci/pubchunks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pubchunks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pubchunks"}, {"uid": "github/ropensci/smapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/smapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/smapr"}, {"uid": "github/ropensci/weatherOz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weatherOz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weatherOz"}, {"uid": "github/ropensci/katex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/katex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/katex"}, {"uid": "github/ropensci/rorcid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rorcid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rorcid"}, {"uid": "github/ropensci/rcoreoa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcoreoa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcoreoa"}, {"uid": "github/ropensci/tidyqpcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyqpcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyqpcr"}, {"uid": "github/ropensci/handlr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/handlr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/handlr"}, {"uid": "github/ropensci/bittrex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bittrex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bittrex"}, {"uid": "github/ropensci/webmockr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webmockr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webmockr"}, {"uid": "github/ropensci/oai", "html_url": "https://rseng.github.io/software/repository/github/ropensci/oai", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/oai"}, {"uid": "github/ropensci/brranching", "html_url": "https://rseng.github.io/software/repository/github/ropensci/brranching", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/brranching"}, {"uid": "github/ropensci/gistr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gistr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gistr"}, {"uid": "github/ropensci/bib2df", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bib2df", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bib2df"}, {"uid": "github/ropensci/censo2017", "html_url": "https://rseng.github.io/software/repository/github/ropensci/censo2017", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/censo2017"}, {"uid": "github/ropensci/opencv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencv"}, {"uid": "github/ropensci/getlandsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getlandsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getlandsat"}, {"uid": "github/ropensci/ckanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ckanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ckanr"}, {"uid": "github/ropensci/parzer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/parzer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/parzer"}, {"uid": "github/ropensci/jstor", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jstor", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jstor"}, {"uid": "github/ropensci/rinat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rinat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rinat"}, {"uid": "github/ropensci/CoordinateCleaner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/CoordinateCleaner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/CoordinateCleaner"}, {"uid": "github/ropensci/dataspice", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataspice", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataspice"}, {"uid": "github/ropensci/daiquiri", "html_url": "https://rseng.github.io/software/repository/github/ropensci/daiquiri", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/daiquiri"}, {"uid": "github/ropensci/cde", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cde", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cde"}, {"uid": "github/ropensci/robotstxt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/robotstxt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/robotstxt"}, {"uid": "github/ropensci/piggyback", "html_url": "https://rseng.github.io/software/repository/github/ropensci/piggyback", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/piggyback"}, {"uid": "github/ropensci/DoOR.functions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.functions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.functions"}, {"uid": "github/ropensci/terrainr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/terrainr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/terrainr"}, {"uid": "github/ropensci/circle", "html_url": "https://rseng.github.io/software/repository/github/ropensci/circle", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/circle"}, {"uid": "github/ropensci/USAboundaries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundaries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundaries"}, {"uid": "github/ropensci/rperseus", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rperseus", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rperseus"}, {"uid": "github/ropensci/historydata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/historydata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/historydata"}, {"uid": "github/ropensci/rOPTRAM", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rOPTRAM", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rOPTRAM"}, {"uid": "github/ropensci/eia", "html_url": "https://rseng.github.io/software/repository/github/ropensci/eia", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/eia"}, {"uid": "github/ropensci/USAboundariesData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundariesData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundariesData"}, {"uid": "github/ropensci/solrium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/solrium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/solrium"}, {"uid": "github/ropensci/outsider.devtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.devtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.devtools"}, {"uid": "github/ropensci/cleanEHR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cleanEHR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cleanEHR"}, {"uid": "github/ropensci/spocc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spocc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spocc"}, {"uid": "github/ropensci/opentripplanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opentripplanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opentripplanner"}, {"uid": "github/ropensci/MODIStsp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODIStsp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODIStsp"}, {"uid": "github/ropensci/rentrez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rentrez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rentrez"}, {"uid": "github/ropensci/rerddap", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rerddap", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rerddap"}, {"uid": "github/ropensci/rnoaa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnoaa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnoaa"}, {"uid": "github/ropensci/qualtRics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qualtRics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qualtRics"}, {"uid": "github/ropensci/mregions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mregions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mregions"}, {"uid": "github/ropensci/UCSCXenaTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/UCSCXenaTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/UCSCXenaTools"}, {"uid": "github/ropensci/stplanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stplanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stplanr"}, {"uid": "github/ropensci/beastier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beastier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beastier"}, {"uid": "github/ropensci/bowerbird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bowerbird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bowerbird"}, {"uid": "github/ropensci/MODISTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODISTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODISTools"}, {"uid": "github/ropensci/rtika", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtika", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtika"}, {"uid": "github/ropensci/datapack", "html_url": "https://rseng.github.io/software/repository/github/ropensci/datapack", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/datapack"}, {"uid": "github/ropensci/outsider.base", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.base", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.base"}, {"uid": "github/ropensci/git2rdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2rdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2rdata"}, {"uid": "github/ropensci/Rpolyhedra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rpolyhedra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rpolyhedra"}, {"uid": "github/ropensci/essurvey", "html_url": "https://rseng.github.io/software/repository/github/ropensci/essurvey", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/essurvey"}, {"uid": "github/ropensci/spelling", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spelling", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spelling"}, {"uid": "github/ropensci/jenkins", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jenkins", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jenkins"}, {"uid": "github/ropensci/dataaimsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataaimsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataaimsr"}, {"uid": "github/ropensci/tokenizers", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tokenizers", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tokenizers"}, {"uid": "github/ropensci/visdat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/visdat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/visdat"}, {"uid": "github/ropensci/internetarchive", "html_url": "https://rseng.github.io/software/repository/github/ropensci/internetarchive", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/internetarchive"}, {"uid": "github/ropensci/natserv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/natserv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/natserv"}, {"uid": "github/ropensci/ijtiff", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ijtiff", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ijtiff"}, {"uid": "github/ropensci/opencontext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencontext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencontext"}, {"uid": "github/ropensci/cyphr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cyphr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cyphr"}, {"uid": "github/ropensci/PostcodesioR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/PostcodesioR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/PostcodesioR"}, {"uid": "github/ropensci/opencage", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencage", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencage"}, {"uid": "github/ropensci/hydroscoper", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hydroscoper", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hydroscoper"}, {"uid": "github/ropensci/rgpdd", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgpdd", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgpdd"}, {"uid": "github/ropensci/AntWeb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/AntWeb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/AntWeb"}, {"uid": "github/ropensci/tiler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tiler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tiler"}, {"uid": "github/ropensci/camsRad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/camsRad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/camsRad"}, {"uid": "github/ropensci/ritis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ritis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ritis"}, {"uid": "github/ropensci/rdefra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdefra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdefra"}, {"uid": "github/ropensci/rglobi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rglobi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rglobi"}, {"uid": "github/ropensci/wateRinfo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wateRinfo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wateRinfo"}, {"uid": "github/ropensci/EndoMineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EndoMineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EndoMineR"}, {"uid": "github/ropensci/suppdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/suppdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/suppdata"}, {"uid": "github/ropensci/c3dr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c3dr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c3dr"}, {"uid": "github/ropensci/ruODK", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ruODK", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ruODK"}, {"uid": "github/ropensci/allodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/allodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/allodb"}, {"uid": "github/ropensci/chromer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chromer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chromer"}, {"uid": "github/ropensci/pdftools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pdftools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pdftools"}, {"uid": "github/ropensci/codemetar", "html_url": "https://rseng.github.io/software/repository/github/ropensci/codemetar", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/codemetar"}, {"uid": "github/ropensci/gtexr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtexr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtexr"}, {"uid": "github/ropensci/pendulum", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pendulum"}, {"uid": "github/ropensci/tic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tic"}, {"uid": "github/ropensci/osmplotr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmplotr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmplotr"}, {"uid": "github/ropensci/gpg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gpg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gpg"}, {"uid": "github/ropensci/rAltmetric", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAltmetric", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAltmetric"}, {"uid": "github/ropensci/mapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapr"}, {"uid": "github/ropensci/lightr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lightr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lightr"}, {"uid": "github/ropensci/nasapower", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nasapower", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nasapower"}, {"uid": "github/ropensci/getCRUCLdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getCRUCLdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getCRUCLdata"}, {"uid": "github/ropensci/cld3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld3"}, {"uid": "github/ropensci/spatsoc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spatsoc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spatsoc"}, {"uid": "github/ropensci/phylotaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylotaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylotaR"}, {"uid": "github/ropensci/timefuzz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/timefuzz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/timefuzz"}, {"uid": "github/ropensci/bikedata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bikedata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bikedata"}, {"uid": "github/ropensci/DoOR.data", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.data", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.data"}, {"uid": "github/ropensci/jsonld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonld"}, {"uid": "github/ropensci/refimpact", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refimpact", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refimpact"}, {"uid": "github/ropensci/rromeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rromeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rromeo"}, {"uid": "github/ropensci/trufflesniffer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/trufflesniffer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/trufflesniffer"}, {"uid": "github/ropensci/randgeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/randgeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/randgeo"}, {"uid": "github/ropensci/virtuoso", "html_url": "https://rseng.github.io/software/repository/github/ropensci/virtuoso", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/virtuoso"}, {"uid": "github/ropensci/nodbi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nodbi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nodbi"}, {"uid": "github/ropensci/comtradr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/comtradr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/comtradr"}, {"uid": "github/ropensci/SymbiotaR2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/SymbiotaR2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/SymbiotaR2"}, {"uid": "github/ropensci/gigs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gigs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gigs"}, {"uid": "github/ropensci/ramlegacy", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ramlegacy", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ramlegacy"}, {"uid": "github/ropensci/rfigshare", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfigshare", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfigshare"}, {"uid": "github/ropensci/seasl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/seasl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/seasl"}, {"uid": "github/ropensci/rtweet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtweet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtweet"}, {"uid": "github/ropensci/tidync", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidync", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidync"}, {"uid": "github/ropensci/rnpn", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnpn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnpn"}, {"uid": "github/ropensci/rnaturalearthhires", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthhires", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthhires"}, {"uid": "github/ropensci/fireexposuR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fireexposuR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fireexposuR"}, {"uid": "github/ropensci/rrlite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrlite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrlite"}, {"uid": "github/ropensci/skimr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skimr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skimr"}, {"uid": "github/ropensci/citesdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citesdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citesdb"}, {"uid": "github/ropensci/elastic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/elastic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/elastic"}, {"uid": "github/ropensci/rsnps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsnps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsnps"}, {"uid": "github/ropensci/iheatmapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/iheatmapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/iheatmapr"}, {"uid": "github/ropensci/rb3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rb3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rb3"}, {"uid": "github/ropensci/rebird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rebird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rebird"}, {"uid": "github/ropensci/lingtypology", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lingtypology", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lingtypology"}, {"uid": "github/ropensci/fauxpas", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fauxpas", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fauxpas"}, {"uid": "github/ropensci/rrricanesdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanesdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanesdata"}, {"uid": "github/ropensci/rbhl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbhl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbhl"}, {"uid": "github/ropensci/riem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/riem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/riem"}, {"uid": "github/ropensci/skynet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skynet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skynet"}, {"uid": "github/ropensci/worrms", "html_url": "https://rseng.github.io/software/repository/github/ropensci/worrms", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/worrms"}, {"uid": "github/ropensci/refsplitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refsplitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refsplitr"}, {"uid": "github/ropensci/nbaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nbaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nbaR"}, {"uid": "github/ropensci/geojsonio", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonio", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonio"}, {"uid": "github/ropensci/chlorpromazineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chlorpromazineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chlorpromazineR"}, {"uid": "github/ropensci/bibtex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bibtex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bibtex"}, {"uid": "github/ropensci/crul", "html_url": "https://rseng.github.io/software/repository/github/ropensci/crul", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/crul"}, {"uid": "github/ropensci/cRegulome", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cRegulome", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cRegulome"}, {"uid": "github/ropensci/rnassqs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnassqs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnassqs"}, {"uid": "github/ropensci/wellknown", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wellknown", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wellknown"}, {"uid": "github/ropensci/isdparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/isdparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/isdparser"}, {"uid": "github/ropensci/tif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tif"}, {"uid": "github/ropensci/xslt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/xslt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/xslt"}, {"uid": "github/ropensci/tacmagic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tacmagic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tacmagic"}, {"uid": "github/ropensci/gtfsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtfsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtfsr"}, {"uid": "github/ropensci/NLMR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/NLMR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/NLMR"}, {"uid": "github/ropensci/rdflib", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdflib", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdflib"}, {"uid": "github/ropensci/taxizedb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxizedb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxizedb"}, {"uid": "github/ropensci/rgbif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgbif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgbif"}, {"uid": "github/ropensci/phonfieldwork", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phonfieldwork", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phonfieldwork"}, {"uid": "github/ropensci/outsider", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider"}, {"uid": "github/ropensci/medrxivr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/medrxivr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/medrxivr"}, {"uid": "github/ropensci/FedData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/FedData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/FedData"}, {"uid": "github/ropensci/colocr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/colocr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/colocr"}, {"uid": "github/ropensci/git2r", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2r", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2r"}, {"uid": "github/ropensci/rfisheries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfisheries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfisheries"}, {"uid": "github/ropensci/unrtf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unrtf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unrtf"}, {"uid": "github/ropensci/clifro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/clifro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/clifro"}, {"uid": "github/ropensci/photosearcher", "html_url": "https://rseng.github.io/software/repository/github/ropensci/photosearcher", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/photosearcher"}, {"uid": "github/ropensci/tidypmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidypmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidypmc"}, {"uid": "github/ropensci/rAvis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAvis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAvis"}, {"uid": "github/ropensci/exoplanets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/exoplanets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/exoplanets"}, {"uid": "github/ropensci/excluder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/excluder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/excluder"}, {"uid": "github/ropensci/ecoengine", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ecoengine", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ecoengine"}, {"uid": "github/ropensci/rgnparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgnparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgnparser"}, {"uid": "github/ropensci/ots", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ots", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ots"}, {"uid": "github/ropensci/rdatacite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdatacite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdatacite"}, {"uid": "github/ropensci/restez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/restez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/restez"}, {"uid": "github/ropensci/namext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/namext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/namext"}, {"uid": "github/ropensci/patentsview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/patentsview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/patentsview"}, {"uid": "github/ropensci/scrubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/scrubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/scrubr"}, {"uid": "github/ropensci/hddtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hddtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hddtools"}, {"uid": "github/ropensci/cffr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cffr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cffr"}, {"uid": "github/ropensci/citecorp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citecorp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citecorp"}, {"uid": "github/ropensci/rotl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rotl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rotl"}, {"uid": "github/ropensci/c14bazAAR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c14bazAAR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c14bazAAR"}, {"uid": "github/ropensci/antiword", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antiword", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antiword"}, {"uid": "github/ropensci/fulltext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fulltext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fulltext"}, {"uid": "github/ropensci/predictNMB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/predictNMB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/predictNMB"}, {"uid": "github/ropensci/conditionz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/conditionz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/conditionz"}, {"uid": "github/ropensci/tesseract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tesseract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tesseract"}, {"uid": "github/ropensci/qpdf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qpdf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qpdf"}, {"uid": "github/ropensci/charlatan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/charlatan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/charlatan"}, {"uid": "github/ropensci/weathercan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weathercan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weathercan"}, {"uid": "github/ropensci/EML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EML"}, {"uid": "github/ropensci/finch", "html_url": "https://rseng.github.io/software/repository/github/ropensci/finch", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/finch"}, {"uid": "github/ropensci/jsonvalidate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonvalidate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonvalidate"}, {"uid": "github/ropensci/ssh", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ssh", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ssh"}, {"uid": "github/ropensci/RSelenium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RSelenium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RSelenium"}, {"uid": "github/ropensci/wikitaxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wikitaxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wikitaxa"}, {"uid": "github/ropensci/osmdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmdata"}, {"uid": "github/ropensci/wdman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wdman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wdman"}, {"uid": "github/ropensci/MtreeRing", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MtreeRing", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MtreeRing"}, {"uid": "github/ropensci/googleLanguageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/googleLanguageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/googleLanguageR"}, {"uid": "github/ropensci/bomrang", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bomrang", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bomrang"}, {"uid": "github/ropensci/rmangal", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rmangal", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rmangal"}, {"uid": "github/ropensci/chirps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chirps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chirps"}, {"uid": "github/ropensci/plotly", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plotly", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plotly"}, {"uid": "github/ropensci/staypuft", "html_url": "https://rseng.github.io/software/repository/github/ropensci/staypuft", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/staypuft"}, {"uid": "github/ropensci/stats19", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stats19", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stats19"}, {"uid": "github/ropensci/BaseSet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/BaseSet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/BaseSet"}, {"uid": "github/ropensci/taxadb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxadb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxadb"}, {"uid": "github/ropensci/infx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/infx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/infx"}, {"uid": "github/ropensci/rfishbase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfishbase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfishbase"}, {"uid": "github/ropensci/biomartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/biomartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/biomartr"}, {"uid": "github/ropensci/mcbette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mcbette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mcbette"}, {"uid": "github/ropensci/babette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/babette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/babette"}, {"uid": "github/ropensci/rdryad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdryad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdryad"}, {"uid": "github/ropensci/arkdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/arkdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/arkdb"}, {"uid": "github/ropensci/nlrx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nlrx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nlrx"}, {"uid": "github/ropensci/roadoi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/roadoi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/roadoi"}, {"uid": "github/ropensci/av", "html_url": "https://rseng.github.io/software/repository/github/ropensci/av", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/av"}, {"uid": "github/ropensci/rusda", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rusda", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rusda"}, {"uid": "github/ropensci/gittargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gittargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gittargets"}, {"uid": "github/ropensci/awardFindR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/awardFindR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/awardFindR"}, {"uid": "github/ropensci/rcrossref", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcrossref", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcrossref"}, {"uid": "github/ropensci/Rclean", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rclean", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rclean"}, {"uid": "github/ropensci/pathviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pathviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pathviewr"}, {"uid": "github/ropensci/drake", "html_url": "https://rseng.github.io/software/repository/github/ropensci/drake", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/drake"}, {"uid": "github/ropensci/DataSpaceR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataSpaceR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataSpaceR"}, {"uid": "github/ropensci/baRcodeR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/baRcodeR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/baRcodeR"}, {"uid": "github/ropensci/phylocomr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylocomr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylocomr"}, {"uid": "github/ropensci/spiro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spiro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spiro"}, {"uid": "github/ropensci/popler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/popler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/popler"}, {"uid": "github/ropensci/webchem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webchem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webchem"}, {"uid": "github/ropensci/outcomerate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outcomerate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outcomerate"}, {"uid": "github/ropensci/emld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/emld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/emld"}, {"uid": "github/ropensci/osfr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osfr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osfr"}, {"uid": "github/ropensci/rWBclimate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rWBclimate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rWBclimate"}, {"uid": "github/ropensci/rredlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rredlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rredlist"}, {"uid": "github/ropensci/readODS", "html_url": "https://rseng.github.io/software/repository/github/ropensci/readODS", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/readODS"}, {"uid": "github/ropensci/rbace", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbace", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbace"}, {"uid": "github/ropensci/hoardr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hoardr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hoardr"}, {"uid": "github/ropensci/dittodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dittodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dittodb"}, {"uid": "github/ropensci/landscapetools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/landscapetools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/landscapetools"}, {"uid": "github/ropensci/aRxiv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/aRxiv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/aRxiv"}, {"uid": "github/ropensci/vcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/vcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/vcr"}, {"uid": "github/ropensci/hunspell", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hunspell", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hunspell"}, {"uid": "github/ropensci/rfema", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfema", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfema"}, {"uid": "github/ropensci/taxlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxlist"}, {"uid": "github/ropensci/nomisr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nomisr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nomisr"}, {"uid": "github/ropensci/tradestatistics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tradestatistics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tradestatistics"}, {"uid": "github/ropensci/magick", "html_url": "https://rseng.github.io/software/repository/github/ropensci/magick", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/magick"}, {"uid": "github/ropensci/DataPackageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataPackageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataPackageR"}, {"uid": "github/q1cui/discourseGT", "html_url": "https://rseng.github.io/software/repository/github/q1cui/discourseGT", "api_url": "https://rseng.github.io/software/api/repos/github/q1cui/discourseGT"}, {"uid": "github/jydu/maffilter", "html_url": "https://rseng.github.io/software/repository/github/jydu/maffilter", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/maffilter"}, {"uid": "github/jydu/physamp", "html_url": "https://rseng.github.io/software/repository/github/jydu/physamp", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/physamp"}, {"uid": "github/bommert/stabm", "html_url": "https://rseng.github.io/software/repository/github/bommert/stabm", "api_url": "https://rseng.github.io/software/api/repos/github/bommert/stabm"}, {"uid": "github/vosjo/speedyfit", "html_url": "https://rseng.github.io/software/repository/github/vosjo/speedyfit", "api_url": "https://rseng.github.io/software/api/repos/github/vosjo/speedyfit"}, {"uid": "github/UtrechtUniversity/raster_extraction", "html_url": "https://rseng.github.io/software/repository/github/UtrechtUniversity/raster_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/UtrechtUniversity/raster_extraction"}, {"uid": "github/danmoser/pyhdust", "html_url": "https://rseng.github.io/software/repository/github/danmoser/pyhdust", "api_url": "https://rseng.github.io/software/api/repos/github/danmoser/pyhdust"}, {"uid": "github/AllenInstitute/bmtk", "html_url": "https://rseng.github.io/software/repository/github/AllenInstitute/bmtk", "api_url": "https://rseng.github.io/software/api/repos/github/AllenInstitute/bmtk"}, {"uid": "github/dzerbino/velvet", "html_url": "https://rseng.github.io/software/repository/github/dzerbino/velvet", "api_url": "https://rseng.github.io/software/api/repos/github/dzerbino/velvet"}, {"uid": "github/willvousden/ptemcee", "html_url": "https://rseng.github.io/software/repository/github/willvousden/ptemcee", "api_url": "https://rseng.github.io/software/api/repos/github/willvousden/ptemcee"}, {"uid": "github/chfeder/turbulence_generator", "html_url": "https://rseng.github.io/software/repository/github/chfeder/turbulence_generator", "api_url": "https://rseng.github.io/software/api/repos/github/chfeder/turbulence_generator"}, {"uid": "github/candYgene/abg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/abg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/abg-ld"}, {"uid": "github/candYgene/pbg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/pbg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/pbg-ld"}, {"uid": "github/candYgene/QTM", "html_url": "https://rseng.github.io/software/repository/github/candYgene/QTM", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/QTM"}, {"uid": "github/candYgene/siga", "html_url": "https://rseng.github.io/software/repository/github/candYgene/siga", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/siga"}, {"uid": "github/UgoLomoio/gtex_visualizer", "html_url": "https://rseng.github.io/software/repository/github/UgoLomoio/gtex_visualizer", "api_url": "https://rseng.github.io/software/api/repos/github/UgoLomoio/gtex_visualizer"}, {"uid": "github/quantum-exeter/SpiDy.jl", "html_url": "https://rseng.github.io/software/repository/github/quantum-exeter/SpiDy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/quantum-exeter/SpiDy.jl"}, {"uid": "github/wen-jams/bsavi", "html_url": "https://rseng.github.io/software/repository/github/wen-jams/bsavi", "api_url": "https://rseng.github.io/software/api/repos/github/wen-jams/bsavi"}, {"uid": "github/chadagreene/Tide-Model-Driver", "html_url": "https://rseng.github.io/software/repository/github/chadagreene/Tide-Model-Driver", "api_url": "https://rseng.github.io/software/api/repos/github/chadagreene/Tide-Model-Driver"}, {"uid": "github/deezer/spleeter", "html_url": "https://rseng.github.io/software/repository/github/deezer/spleeter", "api_url": "https://rseng.github.io/software/api/repos/github/deezer/spleeter"}, {"uid": "github/SMI/SmiServices", "html_url": "https://rseng.github.io/software/repository/github/SMI/SmiServices", "api_url": "https://rseng.github.io/software/api/repos/github/SMI/SmiServices"}, {"uid": "github/skschum/MFAssignR", "html_url": "https://rseng.github.io/software/repository/github/skschum/MFAssignR", "api_url": "https://rseng.github.io/software/api/repos/github/skschum/MFAssignR"}, {"uid": "github/bregaldo/pywst", "html_url": "https://rseng.github.io/software/repository/github/bregaldo/pywst", "api_url": "https://rseng.github.io/software/api/repos/github/bregaldo/pywst"}, {"uid": "github/johnschwenck/bp", "html_url": "https://rseng.github.io/software/repository/github/johnschwenck/bp", "api_url": "https://rseng.github.io/software/api/repos/github/johnschwenck/bp"}, {"uid": "github/Yunzheng168/PANCAKE", "html_url": "https://rseng.github.io/software/repository/github/Yunzheng168/PANCAKE", "api_url": "https://rseng.github.io/software/api/repos/github/Yunzheng168/PANCAKE"}, {"uid": "github/freebayes/freebayes", "html_url": "https://rseng.github.io/software/repository/github/freebayes/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/freebayes/freebayes"}, {"uid": "github/darioizzo/dcgp", "html_url": "https://rseng.github.io/software/repository/github/darioizzo/dcgp", "api_url": "https://rseng.github.io/software/api/repos/github/darioizzo/dcgp"}, {"uid": "github/ITA-Solar/rh", "html_url": "https://rseng.github.io/software/repository/github/ITA-Solar/rh", "api_url": "https://rseng.github.io/software/api/repos/github/ITA-Solar/rh"}, {"uid": "github/hz1010/FIPRESCI_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/hz1010/FIPRESCI_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/hz1010/FIPRESCI_data_analysis"}, {"uid": "github/Huang-CL/Magrathea", "html_url": "https://rseng.github.io/software/repository/github/Huang-CL/Magrathea", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-CL/Magrathea"}, {"uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefmath/SurfaceWaterIntegratedModeling.jl"}, {"uid": "github/MikkelSchubert/adapterremoval", "html_url": "https://rseng.github.io/software/repository/github/MikkelSchubert/adapterremoval", "api_url": "https://rseng.github.io/software/api/repos/github/MikkelSchubert/adapterremoval"}, {"uid": "github/rmaphoh/AutoMorph", "html_url": "https://rseng.github.io/software/repository/github/rmaphoh/AutoMorph", "api_url": "https://rseng.github.io/software/api/repos/github/rmaphoh/AutoMorph"}, {"uid": "github/jeaadams/ExoPix", "html_url": "https://rseng.github.io/software/repository/github/jeaadams/ExoPix", "api_url": "https://rseng.github.io/software/api/repos/github/jeaadams/ExoPix"}, {"uid": "github/gvilitechltd/LibSWIFFT", "html_url": "https://rseng.github.io/software/repository/github/gvilitechltd/LibSWIFFT", "api_url": "https://rseng.github.io/software/api/repos/github/gvilitechltd/LibSWIFFT"}, {"uid": "github/kerkelae/disimpy", "html_url": "https://rseng.github.io/software/repository/github/kerkelae/disimpy", "api_url": "https://rseng.github.io/software/api/repos/github/kerkelae/disimpy"}, {"uid": "github/JEFworks-Lab/STdeconvolve", "html_url": "https://rseng.github.io/software/repository/github/JEFworks-Lab/STdeconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/JEFworks-Lab/STdeconvolve"}, {"uid": "github/alexander-pastukhov/bistablehistory", "html_url": "https://rseng.github.io/software/repository/github/alexander-pastukhov/bistablehistory", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-pastukhov/bistablehistory"}, {"uid": "github/libgamera/GAMERA", "html_url": "https://rseng.github.io/software/repository/github/libgamera/GAMERA", "api_url": "https://rseng.github.io/software/api/repos/github/libgamera/GAMERA"}, {"uid": "github/tvwenger/bayes_spec", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/bayes_spec", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/bayes_spec"}, {"uid": "github/tvwenger/millennium-tap-query", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/millennium-tap-query", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/millennium-tap-query"}, {"uid": "github/tvwenger/tmbidl", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/tmbidl", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/tmbidl"}, {"uid": "github/tvwenger/HII-Region-Models", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/HII-Region-Models", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/HII-Region-Models"}, {"uid": "github/tvwenger/wisp", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/wisp", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/wisp"}, {"uid": "github/tvwenger/kinematic_scaleheight", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kinematic_scaleheight", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kinematic_scaleheight"}, {"uid": "github/tvwenger/kd", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kd", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kd"}, {"uid": "github/tvwenger/hii-region-kinematics", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/hii-region-kinematics", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/hii-region-kinematics"}, {"uid": "github/jkrogager/VoigtFit", "html_url": "https://rseng.github.io/software/repository/github/jkrogager/VoigtFit", "api_url": "https://rseng.github.io/software/api/repos/github/jkrogager/VoigtFit"}, {"uid": "github/WilsonGregory/ginjax", "html_url": "https://rseng.github.io/software/repository/github/WilsonGregory/ginjax", "api_url": "https://rseng.github.io/software/api/repos/github/WilsonGregory/ginjax"}, {"uid": "github/oliveirara/polyMV", "html_url": "https://rseng.github.io/software/repository/github/oliveirara/polyMV", "api_url": "https://rseng.github.io/software/api/repos/github/oliveirara/polyMV"}, {"uid": "github/BMCV/giatools", "html_url": "https://rseng.github.io/software/repository/github/BMCV/giatools", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/giatools"}, {"uid": "github/BMCV/galaxy-image-analysis", "html_url": "https://rseng.github.io/software/repository/github/BMCV/galaxy-image-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/galaxy-image-analysis"}, {"uid": "github/filipezabala/voice", "html_url": "https://rseng.github.io/software/repository/github/filipezabala/voice", "api_url": "https://rseng.github.io/software/api/repos/github/filipezabala/voice"}, {"uid": "github/SandyYuan/GRAND-HOD", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/GRAND-HOD", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/GRAND-HOD"}, {"uid": "github/SandyYuan/s3PCF", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/s3PCF", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/s3PCF"}, {"uid": "github/4DModeller/fdmr", "html_url": "https://rseng.github.io/software/repository/github/4DModeller/fdmr", "api_url": "https://rseng.github.io/software/api/repos/github/4DModeller/fdmr"}, {"uid": "github/dblaschke-LANL/PyDislocDyn", "html_url": "https://rseng.github.io/software/repository/github/dblaschke-LANL/PyDislocDyn", "api_url": "https://rseng.github.io/software/api/repos/github/dblaschke-LANL/PyDislocDyn"}, {"uid": "github/el2718/FastQSL", "html_url": "https://rseng.github.io/software/repository/github/el2718/FastQSL", "api_url": "https://rseng.github.io/software/api/repos/github/el2718/FastQSL"}, {"uid": "github/fccoelho/epigrass", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epigrass", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epigrass"}, {"uid": "github/fccoelho/epimodels", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epimodels", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epimodels"}, {"uid": "github/SpectraCollab/ORMIR_XCT", "html_url": "https://rseng.github.io/software/repository/github/SpectraCollab/ORMIR_XCT", "api_url": "https://rseng.github.io/software/api/repos/github/SpectraCollab/ORMIR_XCT"}, {"uid": "github/CalumHawcroft/Starburst", "html_url": "https://rseng.github.io/software/repository/github/CalumHawcroft/Starburst", "api_url": "https://rseng.github.io/software/api/repos/github/CalumHawcroft/Starburst"}, {"uid": "github/vle-prtc/rbef-prtc", "html_url": "https://rseng.github.io/software/repository/github/vle-prtc/rbef-prtc", "api_url": "https://rseng.github.io/software/api/repos/github/vle-prtc/rbef-prtc"}, {"uid": "github/PaulMcMillan-Astro/Torus", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/Torus", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/Torus"}, {"uid": "github/PaulMcMillan-Astro/GalPot", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/GalPot", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/GalPot"}, {"uid": "github/indraniel/fqgrep", "html_url": "https://rseng.github.io/software/repository/github/indraniel/fqgrep", "api_url": "https://rseng.github.io/software/api/repos/github/indraniel/fqgrep"}, {"uid": "github/morpheus-project/morpheus", "html_url": "https://rseng.github.io/software/repository/github/morpheus-project/morpheus", "api_url": "https://rseng.github.io/software/api/repos/github/morpheus-project/morpheus"}, {"uid": "github/johnveitch/cpnest", "html_url": "https://rseng.github.io/software/repository/github/johnveitch/cpnest", "api_url": "https://rseng.github.io/software/api/repos/github/johnveitch/cpnest"}, {"uid": "github/davi-rodrigues/CCBH-Numerics", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/CCBH-Numerics", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/CCBH-Numerics"}, {"uid": "github/davi-rodrigues/NAVanalysis", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/NAVanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/NAVanalysis"}, {"uid": "github/argiopetech/base", "html_url": "https://rseng.github.io/software/repository/github/argiopetech/base", "api_url": "https://rseng.github.io/software/api/repos/github/argiopetech/base"}, {"uid": "github/TeamNCMC/cuisto", "html_url": "https://rseng.github.io/software/repository/github/TeamNCMC/cuisto", "api_url": "https://rseng.github.io/software/api/repos/github/TeamNCMC/cuisto"}, {"uid": "github/csalyk/spectools_ir", "html_url": "https://rseng.github.io/software/repository/github/csalyk/spectools_ir", "api_url": "https://rseng.github.io/software/api/repos/github/csalyk/spectools_ir"}, {"uid": "github/hendr1km/dropout", "html_url": "https://rseng.github.io/software/repository/github/hendr1km/dropout", "api_url": "https://rseng.github.io/software/api/repos/github/hendr1km/dropout"}, {"uid": "github/LalResearchGroup/CNV-clinviewer", "html_url": "https://rseng.github.io/software/repository/github/LalResearchGroup/CNV-clinviewer", "api_url": "https://rseng.github.io/software/api/repos/github/LalResearchGroup/CNV-clinviewer"}, {"uid": "github/mary77/scQcut", "html_url": "https://rseng.github.io/software/repository/github/mary77/scQcut", "api_url": "https://rseng.github.io/software/api/repos/github/mary77/scQcut"}, {"uid": "github/michalc/OpenTTDLab", "html_url": "https://rseng.github.io/software/repository/github/michalc/OpenTTDLab", "api_url": "https://rseng.github.io/software/api/repos/github/michalc/OpenTTDLab"}, {"uid": "github/SihaoCheng/WD_models", "html_url": "https://rseng.github.io/software/repository/github/SihaoCheng/WD_models", "api_url": "https://rseng.github.io/software/api/repos/github/SihaoCheng/WD_models"}, {"uid": "github/jaimedelacruz/stic", "html_url": "https://rseng.github.io/software/repository/github/jaimedelacruz/stic", "api_url": "https://rseng.github.io/software/api/repos/github/jaimedelacruz/stic"}, {"uid": "github/ethankruse/koi3278", "html_url": "https://rseng.github.io/software/repository/github/ethankruse/koi3278", "api_url": "https://rseng.github.io/software/api/repos/github/ethankruse/koi3278"}, {"uid": "github/ec-jrc/nrt", "html_url": "https://rseng.github.io/software/repository/github/ec-jrc/nrt", "api_url": "https://rseng.github.io/software/api/repos/github/ec-jrc/nrt"}, {"uid": "github/grburgess/polarpy", "html_url": "https://rseng.github.io/software/repository/github/grburgess/polarpy", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/polarpy"}, {"uid": "github/grburgess/popsynth", "html_url": "https://rseng.github.io/software/repository/github/grburgess/popsynth", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/popsynth"}, {"uid": "github/grburgess/pynchrotron", "html_url": "https://rseng.github.io/software/repository/github/grburgess/pynchrotron", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/pynchrotron"}, {"uid": "github/grburgess/nazgul", "html_url": "https://rseng.github.io/software/repository/github/grburgess/nazgul", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/nazgul"}, {"uid": "github/grburgess/ronswanson", "html_url": "https://rseng.github.io/software/repository/github/grburgess/ronswanson", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/ronswanson"}, {"uid": "github/RajLabMSSM/echolocatoR", "html_url": "https://rseng.github.io/software/repository/github/RajLabMSSM/echolocatoR", "api_url": "https://rseng.github.io/software/api/repos/github/RajLabMSSM/echolocatoR"}, {"uid": "github/patrickfuchs/buildH", "html_url": "https://rseng.github.io/software/repository/github/patrickfuchs/buildH", "api_url": "https://rseng.github.io/software/api/repos/github/patrickfuchs/buildH"}, {"uid": "github/josegcpa/nnunet_serve", "html_url": "https://rseng.github.io/software/repository/github/josegcpa/nnunet_serve", "api_url": "https://rseng.github.io/software/api/repos/github/josegcpa/nnunet_serve"}, {"uid": "github/uw-ipd/RoseTTAFold2", "html_url": "https://rseng.github.io/software/repository/github/uw-ipd/RoseTTAFold2", "api_url": "https://rseng.github.io/software/api/repos/github/uw-ipd/RoseTTAFold2"}, {"uid": "github/linksmart/thing-directory", "html_url": "https://rseng.github.io/software/repository/github/linksmart/thing-directory", "api_url": "https://rseng.github.io/software/api/repos/github/linksmart/thing-directory"}, {"uid": "github/ezer/PAFway", "html_url": "https://rseng.github.io/software/repository/github/ezer/PAFway", "api_url": "https://rseng.github.io/software/api/repos/github/ezer/PAFway"}, {"uid": "github/flemingtonlab/SpliceV", "html_url": "https://rseng.github.io/software/repository/github/flemingtonlab/SpliceV", "api_url": "https://rseng.github.io/software/api/repos/github/flemingtonlab/SpliceV"}, {"uid": "github/jgoodeve/streaktools", "html_url": "https://rseng.github.io/software/repository/github/jgoodeve/streaktools", "api_url": "https://rseng.github.io/software/api/repos/github/jgoodeve/streaktools"}, {"uid": "github/wustat/rjaf", "html_url": "https://rseng.github.io/software/repository/github/wustat/rjaf", "api_url": "https://rseng.github.io/software/api/repos/github/wustat/rjaf"}, {"uid": "github/HoBeZwe/SphericalScattering.jl", "html_url": "https://rseng.github.io/software/repository/github/HoBeZwe/SphericalScattering.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HoBeZwe/SphericalScattering.jl"}, {"uid": "github/tBilby/tBilby", "html_url": "https://rseng.github.io/software/repository/github/tBilby/tBilby", "api_url": "https://rseng.github.io/software/api/repos/github/tBilby/tBilby"}, {"uid": "github/micbia/SubgridClumping", "html_url": "https://rseng.github.io/software/repository/github/micbia/SubgridClumping", "api_url": "https://rseng.github.io/software/api/repos/github/micbia/SubgridClumping"}, {"uid": "github/wuzhenao/CPPLS-MLP", "html_url": "https://rseng.github.io/software/repository/github/wuzhenao/CPPLS-MLP", "api_url": "https://rseng.github.io/software/api/repos/github/wuzhenao/CPPLS-MLP"}, {"uid": "github/Huang-lab/BEACON", "html_url": "https://rseng.github.io/software/repository/github/Huang-lab/BEACON", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-lab/BEACON"}, {"uid": "github/margudo/LSSGALPY", "html_url": "https://rseng.github.io/software/repository/github/margudo/LSSGALPY", "api_url": "https://rseng.github.io/software/api/repos/github/margudo/LSSGALPY"}, {"uid": "github/evolbioinfo/bdei", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdei", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdei"}, {"uid": "github/evolbioinfo/treesimulator", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/treesimulator", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/treesimulator"}, {"uid": "github/evolbioinfo/bdpn", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdpn", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdpn"}, {"uid": "github/evolbioinfo/bdct", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdct", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdct"}, {"uid": "github/inonchiu/ComEst", "html_url": "https://rseng.github.io/software/repository/github/inonchiu/ComEst", "api_url": "https://rseng.github.io/software/api/repos/github/inonchiu/ComEst"}, {"uid": "github/sparks-baird/xtal2png", "html_url": "https://rseng.github.io/software/repository/github/sparks-baird/xtal2png", "api_url": "https://rseng.github.io/software/api/repos/github/sparks-baird/xtal2png"}, {"uid": "github/maxmahlke/ssos", "html_url": "https://rseng.github.io/software/repository/github/maxmahlke/ssos", "api_url": "https://rseng.github.io/software/api/repos/github/maxmahlke/ssos"}, {"uid": "github/WorkflowConversion/CTDConverter", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDConverter", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDConverter"}, {"uid": "github/WorkflowConversion/CTDopts", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDopts", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDopts"}, {"uid": "github/jw-lin/cbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/cbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/cbeam"}, {"uid": "github/jw-lin/lightbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/lightbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/lightbeam"}, {"uid": "github/pw31/GGchem", "html_url": "https://rseng.github.io/software/repository/github/pw31/GGchem", "api_url": "https://rseng.github.io/software/api/repos/github/pw31/GGchem"}, {"uid": "github/mwvgroup/pwv_kpno", "html_url": "https://rseng.github.io/software/repository/github/mwvgroup/pwv_kpno", "api_url": "https://rseng.github.io/software/api/repos/github/mwvgroup/pwv_kpno"}, {"uid": "github/mikessh/vdjtools", "html_url": "https://rseng.github.io/software/repository/github/mikessh/vdjtools", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/vdjtools"}, {"uid": "github/mikessh/oncofuse", "html_url": "https://rseng.github.io/software/repository/github/mikessh/oncofuse", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/oncofuse"}, {"uid": "github/euclidlib/euclidlib", "html_url": "https://rseng.github.io/software/repository/github/euclidlib/euclidlib", "api_url": "https://rseng.github.io/software/api/repos/github/euclidlib/euclidlib"}, {"uid": "github/pypeit/PypeIt", "html_url": "https://rseng.github.io/software/repository/github/pypeit/PypeIt", "api_url": "https://rseng.github.io/software/api/repos/github/pypeit/PypeIt"}, {"uid": "github/metagenlab/assembly_finder", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/assembly_finder", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/assembly_finder"}, {"uid": "github/metagenlab/MeSS", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/MeSS", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/MeSS"}, {"uid": "github/VILLASframework/node", "html_url": "https://rseng.github.io/software/repository/github/VILLASframework/node", "api_url": "https://rseng.github.io/software/api/repos/github/VILLASframework/node"}, {"uid": "github/icecube/FIRESONG", "html_url": "https://rseng.github.io/software/repository/github/icecube/FIRESONG", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/FIRESONG"}, {"uid": "github/icecube/TauRunner", "html_url": "https://rseng.github.io/software/repository/github/icecube/TauRunner", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/TauRunner"}, {"uid": "github/icecube/toise", "html_url": "https://rseng.github.io/software/repository/github/icecube/toise", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/toise"}, {"uid": "github/dh4gan/oberon", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/oberon", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/oberon"}, {"uid": "github/dh4gan/taktent", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/taktent", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/taktent"}, {"uid": "github/dh4gan/tache", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/tache", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/tache"}, {"uid": "github/dh4gan/grapus", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/grapus", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/grapus"}, {"uid": "github/kgullikson88/Companion-Finder", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Companion-Finder", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Companion-Finder"}, {"uid": "github/kgullikson88/Telluric-Fitter", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Telluric-Fitter", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Telluric-Fitter"}, {"uid": "github/jamescasbon/PyVCF", "html_url": "https://rseng.github.io/software/repository/github/jamescasbon/PyVCF", "api_url": "https://rseng.github.io/software/api/repos/github/jamescasbon/PyVCF"}, {"uid": "github/jdber1/opendrop", "html_url": "https://rseng.github.io/software/repository/github/jdber1/opendrop", "api_url": "https://rseng.github.io/software/api/repos/github/jdber1/opendrop"}, {"uid": "github/HinLeung622/pipes_vis", "html_url": "https://rseng.github.io/software/repository/github/HinLeung622/pipes_vis", "api_url": "https://rseng.github.io/software/api/repos/github/HinLeung622/pipes_vis"}, {"uid": "github/fabiopardo/qmap", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/qmap", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/qmap"}, {"uid": "github/fabiopardo/tonic", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/tonic", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/tonic"}, {"uid": "github/Qile0317/APackOfTheClones", "html_url": "https://rseng.github.io/software/repository/github/Qile0317/APackOfTheClones", "api_url": "https://rseng.github.io/software/api/repos/github/Qile0317/APackOfTheClones"}, {"uid": "github/sebhoof/SolarAxionFlux", "html_url": "https://rseng.github.io/software/repository/github/sebhoof/SolarAxionFlux", "api_url": "https://rseng.github.io/software/api/repos/github/sebhoof/SolarAxionFlux"}, {"uid": "github/csb-toolbox/CSB", "html_url": "https://rseng.github.io/software/repository/github/csb-toolbox/CSB", "api_url": "https://rseng.github.io/software/api/repos/github/csb-toolbox/CSB"}, {"uid": "github/ArenA-Crowds/Crowds", "html_url": "https://rseng.github.io/software/repository/github/ArenA-Crowds/Crowds", "api_url": "https://rseng.github.io/software/api/repos/github/ArenA-Crowds/Crowds"}, {"uid": "github/stedolan/jq", "html_url": "https://rseng.github.io/software/repository/github/stedolan/jq", "api_url": "https://rseng.github.io/software/api/repos/github/stedolan/jq"}, {"uid": "github/fermo-metabolomics/fermo_core", "html_url": "https://rseng.github.io/software/repository/github/fermo-metabolomics/fermo_core", "api_url": "https://rseng.github.io/software/api/repos/github/fermo-metabolomics/fermo_core"}, {"uid": "github/wangchao-malab/DeepAc4C", "html_url": "https://rseng.github.io/software/repository/github/wangchao-malab/DeepAc4C", "api_url": "https://rseng.github.io/software/api/repos/github/wangchao-malab/DeepAc4C"}, {"uid": "github/WSWUP/gridwxcomp", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/gridwxcomp", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/gridwxcomp"}, {"uid": "github/WSWUP/agweather-qaqc", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/agweather-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/agweather-qaqc"}, {"uid": "github/esandford/EightBitTransit", "html_url": "https://rseng.github.io/software/repository/github/esandford/EightBitTransit", "api_url": "https://rseng.github.io/software/api/repos/github/esandford/EightBitTransit"}, {"uid": "github/AlanPearl/diffopt", "html_url": "https://rseng.github.io/software/repository/github/AlanPearl/diffopt", "api_url": "https://rseng.github.io/software/api/repos/github/AlanPearl/diffopt"}, {"uid": "github/sPaMFouR/RedPipe", "html_url": "https://rseng.github.io/software/repository/github/sPaMFouR/RedPipe", "api_url": "https://rseng.github.io/software/api/repos/github/sPaMFouR/RedPipe"}, {"uid": "github/fdebras/ECLIPS3D", "html_url": "https://rseng.github.io/software/repository/github/fdebras/ECLIPS3D", "api_url": "https://rseng.github.io/software/api/repos/github/fdebras/ECLIPS3D"}, {"uid": "github/adcameron/ffancy", "html_url": "https://rseng.github.io/software/repository/github/adcameron/ffancy", "api_url": "https://rseng.github.io/software/api/repos/github/adcameron/ffancy"}, {"uid": "github/hablabx/rfast", "html_url": "https://rseng.github.io/software/repository/github/hablabx/rfast", "api_url": "https://rseng.github.io/software/api/repos/github/hablabx/rfast"}, {"uid": "github/peikuan/WBBC", "html_url": "https://rseng.github.io/software/repository/github/peikuan/WBBC", "api_url": "https://rseng.github.io/software/api/repos/github/peikuan/WBBC"}, {"uid": "github/pkugyf/MST", "html_url": "https://rseng.github.io/software/repository/github/pkugyf/MST", "api_url": "https://rseng.github.io/software/api/repos/github/pkugyf/MST"}, {"uid": "github/chocoteam/pychoco", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/pychoco", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/pychoco"}, {"uid": "github/chocoteam/choco-solver", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/choco-solver", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/choco-solver"}, {"uid": "github/williamjameshandley/anesthetic", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/anesthetic", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/anesthetic"}, {"uid": "github/williamjameshandley/fgivenx", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/fgivenx", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/fgivenx"}, {"uid": "github/ChenYangyao/hipp", "html_url": "https://rseng.github.io/software/repository/github/ChenYangyao/hipp", "api_url": "https://rseng.github.io/software/api/repos/github/ChenYangyao/hipp"}, {"uid": "github/bezuidenhoutmc/SeeKAT", "html_url": "https://rseng.github.io/software/repository/github/bezuidenhoutmc/SeeKAT", "api_url": "https://rseng.github.io/software/api/repos/github/bezuidenhoutmc/SeeKAT"}, {"uid": "github/alex-b-davis/gubas", "html_url": "https://rseng.github.io/software/repository/github/alex-b-davis/gubas", "api_url": "https://rseng.github.io/software/api/repos/github/alex-b-davis/gubas"}, {"uid": "github/suchanek/proteusPy", "html_url": "https://rseng.github.io/software/repository/github/suchanek/proteusPy", "api_url": "https://rseng.github.io/software/api/repos/github/suchanek/proteusPy"}, {"uid": "github/computational-chemical-biology/ChemWalker", "html_url": "https://rseng.github.io/software/repository/github/computational-chemical-biology/ChemWalker", "api_url": "https://rseng.github.io/software/api/repos/github/computational-chemical-biology/ChemWalker"}, {"uid": "github/rcarragh/c212", "html_url": "https://rseng.github.io/software/repository/github/rcarragh/c212", "api_url": "https://rseng.github.io/software/api/repos/github/rcarragh/c212"}, {"uid": "github/dpthorngren/PlanetSlicer", "html_url": "https://rseng.github.io/software/repository/github/dpthorngren/PlanetSlicer", "api_url": "https://rseng.github.io/software/api/repos/github/dpthorngren/PlanetSlicer"}, {"uid": "github/rjtanner/StarburstPy", "html_url": "https://rseng.github.io/software/repository/github/rjtanner/StarburstPy", "api_url": "https://rseng.github.io/software/api/repos/github/rjtanner/StarburstPy"}, {"uid": "github/CBIIT-CGBB/gcMECM", "html_url": "https://rseng.github.io/software/repository/github/CBIIT-CGBB/gcMECM", "api_url": "https://rseng.github.io/software/api/repos/github/CBIIT-CGBB/gcMECM"}, {"uid": "github/pnnl/HyperNetX", "html_url": "https://rseng.github.io/software/repository/github/pnnl/HyperNetX", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/HyperNetX"}, {"uid": "github/pnnl/interflow", "html_url": "https://rseng.github.io/software/repository/github/pnnl/interflow", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/interflow"}, {"uid": "github/GOVS-pack/GOVS", "html_url": "https://rseng.github.io/software/repository/github/GOVS-pack/GOVS", "api_url": "https://rseng.github.io/software/api/repos/github/GOVS-pack/GOVS"}, {"uid": "github/johnlees/seer", "html_url": "https://rseng.github.io/software/repository/github/johnlees/seer", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/seer"}, {"uid": "github/johnlees/pp-sketchlib", "html_url": "https://rseng.github.io/software/repository/github/johnlees/pp-sketchlib", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/pp-sketchlib"}, {"uid": "github/johnlees/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/johnlees/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/PopPUNK"}, {"uid": "github/melobio/Attune", "html_url": "https://rseng.github.io/software/repository/github/melobio/Attune", "api_url": "https://rseng.github.io/software/api/repos/github/melobio/Attune"}, {"uid": "github/meixichen/SpatialGEV", "html_url": "https://rseng.github.io/software/repository/github/meixichen/SpatialGEV", "api_url": "https://rseng.github.io/software/api/repos/github/meixichen/SpatialGEV"}, {"uid": "github/sverhoeven/docker-cartodb", "html_url": "https://rseng.github.io/software/repository/github/sverhoeven/docker-cartodb", "api_url": "https://rseng.github.io/software/api/repos/github/sverhoeven/docker-cartodb"}, {"uid": "github/andrew-saydjari/CloudCovErr.jl", "html_url": "https://rseng.github.io/software/repository/github/andrew-saydjari/CloudCovErr.jl", "api_url": "https://rseng.github.io/software/api/repos/github/andrew-saydjari/CloudCovErr.jl"}, {"uid": "github/multiscale/muscle3", "html_url": "https://rseng.github.io/software/repository/github/multiscale/muscle3", "api_url": "https://rseng.github.io/software/api/repos/github/multiscale/muscle3"}, {"uid": "github/panoptes-organization/panoptes", "html_url": "https://rseng.github.io/software/repository/github/panoptes-organization/panoptes", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes-organization/panoptes"}, {"uid": "github/andersdot/photoParallax", "html_url": "https://rseng.github.io/software/repository/github/andersdot/photoParallax", "api_url": "https://rseng.github.io/software/api/repos/github/andersdot/photoParallax"}, {"uid": "github/SietzeN/glottospace", "html_url": "https://rseng.github.io/software/repository/github/SietzeN/glottospace", "api_url": "https://rseng.github.io/software/api/repos/github/SietzeN/glottospace"}, {"uid": "github/almost6heads/ConleyDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/almost6heads/ConleyDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/almost6heads/ConleyDynamics.jl"}, {"uid": "github/Narayana-Rao/SAR-tools", "html_url": "https://rseng.github.io/software/repository/github/Narayana-Rao/SAR-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Narayana-Rao/SAR-tools"}, {"uid": "github/donaldRwilliams/BGGM", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/BGGM", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/BGGM"}, {"uid": "github/donaldRwilliams/GGMnonreg", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/GGMnonreg", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/GGMnonreg"}, {"uid": "github/GenomicParisCentre/toulligQC", "html_url": "https://rseng.github.io/software/repository/github/GenomicParisCentre/toulligQC", "api_url": "https://rseng.github.io/software/api/repos/github/GenomicParisCentre/toulligQC"}, {"uid": "github/martinjzhang/scDRS", "html_url": "https://rseng.github.io/software/repository/github/martinjzhang/scDRS", "api_url": "https://rseng.github.io/software/api/repos/github/martinjzhang/scDRS"}, {"uid": "github/vsoch/citelang", "html_url": "https://rseng.github.io/software/repository/github/vsoch/citelang", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/citelang"}, {"uid": "github/vsoch/gridtest", "html_url": "https://rseng.github.io/software/repository/github/vsoch/gridtest", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/gridtest"}, {"uid": "github/Cosmoglobe/zodipy", "html_url": "https://rseng.github.io/software/repository/github/Cosmoglobe/zodipy", "api_url": "https://rseng.github.io/software/api/repos/github/Cosmoglobe/zodipy"}, {"uid": "github/h3abionet/genesis2", "html_url": "https://rseng.github.io/software/repository/github/h3abionet/genesis2", "api_url": "https://rseng.github.io/software/api/repos/github/h3abionet/genesis2"}, {"uid": "github/cistib/origami", "html_url": "https://rseng.github.io/software/repository/github/cistib/origami", "api_url": "https://rseng.github.io/software/api/repos/github/cistib/origami"}, {"uid": "github/sidchaini/DistClassiPy", "html_url": "https://rseng.github.io/software/repository/github/sidchaini/DistClassiPy", "api_url": "https://rseng.github.io/software/api/repos/github/sidchaini/DistClassiPy"}, {"uid": "github/bbercovici/SBGAT", "html_url": "https://rseng.github.io/software/repository/github/bbercovici/SBGAT", "api_url": "https://rseng.github.io/software/api/repos/github/bbercovici/SBGAT"}, {"uid": "github/souzamonteiro/cnatool", "html_url": "https://rseng.github.io/software/repository/github/souzamonteiro/cnatool", "api_url": "https://rseng.github.io/software/api/repos/github/souzamonteiro/cnatool"}, {"uid": "github/igorrivin/graphem", "html_url": "https://rseng.github.io/software/repository/github/igorrivin/graphem", "api_url": "https://rseng.github.io/software/api/repos/github/igorrivin/graphem"}, {"uid": "github/KVSlab/VaMPy", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/VaMPy", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/VaMPy"}, {"uid": "github/KVSlab/turtleFSI", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/turtleFSI", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/turtleFSI"}, {"uid": "github/ckm3/Py-PDM", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Py-PDM", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Py-PDM"}, {"uid": "github/ckm3/Deep-Transit", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Deep-Transit", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Deep-Transit"}, {"uid": "github/raspishake/rsudp", "html_url": "https://rseng.github.io/software/repository/github/raspishake/rsudp", "api_url": "https://rseng.github.io/software/api/repos/github/raspishake/rsudp"}, {"uid": "github/hsinnan75/GSAlign", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/GSAlign", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/GSAlign"}, {"uid": "github/hsinnan75/MapCaller", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/MapCaller", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/MapCaller"}, {"uid": "github/wanpinglee/MOSAIK", "html_url": "https://rseng.github.io/software/repository/github/wanpinglee/MOSAIK", "api_url": "https://rseng.github.io/software/api/repos/github/wanpinglee/MOSAIK"}, {"uid": "github/bluefoxr/COINr", "html_url": "https://rseng.github.io/software/repository/github/bluefoxr/COINr", "api_url": "https://rseng.github.io/software/api/repos/github/bluefoxr/COINr"}, {"uid": "github/onsala-space-observatory/astromorph", "html_url": "https://rseng.github.io/software/repository/github/onsala-space-observatory/astromorph", "api_url": "https://rseng.github.io/software/api/repos/github/onsala-space-observatory/astromorph"}, {"uid": "github/PolymathicAI/AstroCLIP", "html_url": "https://rseng.github.io/software/repository/github/PolymathicAI/AstroCLIP", "api_url": "https://rseng.github.io/software/api/repos/github/PolymathicAI/AstroCLIP"}, {"uid": "github/PetervanLunteren/EcoAssist", "html_url": "https://rseng.github.io/software/repository/github/PetervanLunteren/EcoAssist", "api_url": "https://rseng.github.io/software/api/repos/github/PetervanLunteren/EcoAssist"}, {"uid": "github/naonori/hitomi", "html_url": "https://rseng.github.io/software/repository/github/naonori/hitomi", "api_url": "https://rseng.github.io/software/api/repos/github/naonori/hitomi"}, {"uid": "github/obertscheiderfhwn/RTMsim", "html_url": "https://rseng.github.io/software/repository/github/obertscheiderfhwn/RTMsim", "api_url": "https://rseng.github.io/software/api/repos/github/obertscheiderfhwn/RTMsim"}, {"uid": "github/matteobreschi/bajes", "html_url": "https://rseng.github.io/software/repository/github/matteobreschi/bajes", "api_url": "https://rseng.github.io/software/api/repos/github/matteobreschi/bajes"}, {"uid": "github/daehwankimlab/hisat2", "html_url": "https://rseng.github.io/software/repository/github/daehwankimlab/hisat2", "api_url": "https://rseng.github.io/software/api/repos/github/daehwankimlab/hisat2"}, {"uid": "github/ptiede/Comrade.jl", "html_url": "https://rseng.github.io/software/repository/github/ptiede/Comrade.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ptiede/Comrade.jl"}, {"uid": "github/Romea/romea-core-path", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-path", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-path"}, {"uid": "github/Romea/romea-ros2-teleop", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-teleop", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-teleop"}, {"uid": "github/Romea/romea-core-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-gps"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-core"}, {"uid": "github/Romea/romea-core-rtls", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-rtls", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-rtls"}, {"uid": "github/Romea/hunter", "html_url": "https://rseng.github.io/software/repository/github/Romea/hunter", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/hunter"}, {"uid": "github/Romea/romea-core-localisation-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-localisation-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-localisation-gps"}, {"uid": "github/Romea/romea-ros2-stereo-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-stereo-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-stereo-camera"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-core"}, {"uid": "github/Romea/romea-ros2-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-camera"}, {"uid": "github/Romea/romea-ros2-rgbd-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-rgbd-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-rgbd-camera"}, {"uid": "github/Romea/scout", "html_url": "https://rseng.github.io/software/repository/github/Romea/scout", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/scout"}, {"uid": "github/Romea/aroco", "html_url": "https://rseng.github.io/software/repository/github/Romea/aroco", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/aroco"}, {"uid": "github/Romea/romea-core-filtering", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-filtering", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-filtering"}, {"uid": "github/Romea/adap2e", "html_url": "https://rseng.github.io/software/repository/github/Romea/adap2e", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/adap2e"}, {"uid": "github/Romea/robucar", "html_url": "https://rseng.github.io/software/repository/github/Romea/robucar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/robucar"}, {"uid": "github/Romea/romea-core-common", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-common", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-common"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-core-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-imu"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-cmd-mux", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-cmd-mux", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-cmd-mux"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-lidar", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-lidar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-lidar"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-core"}, {"uid": "github/Romea/husky", "html_url": "https://rseng.github.io/software/repository/github/Romea/husky", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/husky"}, {"uid": "github/Romea/cinteo", "html_url": "https://rseng.github.io/software/repository/github/Romea/cinteo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/cinteo"}, {"uid": "github/Romea/romea-ros2-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-imu"}, {"uid": "github/Romea/romea-ros2-joy", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-joy", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-joy"}, {"uid": "github/Romea/alpo", "html_url": "https://rseng.github.io/software/repository/github/Romea/alpo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/alpo"}, {"uid": "github/Romea/romea-ros2-localisation-utils", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-localisation-utils", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-localisation-utils"}, {"uid": "github/Romea/romea-ros2-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-gps"}, {"uid": "github/Romea/romea-ros2-mobile-base", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-mobile-base", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-mobile-base"}, {"uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", "html_url": "https://rseng.github.io/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/R-Vessel-X/SlicerRVXLiverSegmentation"}, {"uid": "github/bxlab/bx-python", "html_url": "https://rseng.github.io/software/repository/github/bxlab/bx-python", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/bx-python"}, {"uid": "github/bxlab/metaWRAP", "html_url": "https://rseng.github.io/software/repository/github/bxlab/metaWRAP", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/metaWRAP"}, {"uid": "github/bharathramh/STRIDE-DB_Codes", "html_url": "https://rseng.github.io/software/repository/github/bharathramh/STRIDE-DB_Codes", "api_url": "https://rseng.github.io/software/api/repos/github/bharathramh/STRIDE-DB_Codes"}, {"uid": "github/lsds/LightSaber", "html_url": "https://rseng.github.io/software/repository/github/lsds/LightSaber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/LightSaber"}, {"uid": "github/lsds/TaLoS", "html_url": "https://rseng.github.io/software/repository/github/lsds/TaLoS", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/TaLoS"}, {"uid": "github/lsds/SEEP", "html_url": "https://rseng.github.io/software/repository/github/lsds/SEEP", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/SEEP"}, {"uid": "github/lsds/Saber", "html_url": "https://rseng.github.io/software/repository/github/lsds/Saber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Saber"}, {"uid": "github/lsds/Crossbow", "html_url": "https://rseng.github.io/software/repository/github/lsds/Crossbow", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Crossbow"}, {"uid": "github/lsds/sgx-lkl", "html_url": "https://rseng.github.io/software/repository/github/lsds/sgx-lkl", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/sgx-lkl"}, {"uid": "github/lsds/Neptune", "html_url": "https://rseng.github.io/software/repository/github/lsds/Neptune", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Neptune"}, {"uid": "github/lsds/faasm", "html_url": "https://rseng.github.io/software/repository/github/lsds/faasm", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/faasm"}, {"uid": "github/lsds/KungFu", "html_url": "https://rseng.github.io/software/repository/github/lsds/KungFu", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/KungFu"}, {"uid": "github/lsds/Teechain", "html_url": "https://rseng.github.io/software/repository/github/lsds/Teechain", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Teechain"}, {"uid": "github/RongquanWang/ELF-DPC", "html_url": "https://rseng.github.io/software/repository/github/RongquanWang/ELF-DPC", "api_url": "https://rseng.github.io/software/api/repos/github/RongquanWang/ELF-DPC"}, {"uid": "github/ebundhoo/TAGOPSIN", "html_url": "https://rseng.github.io/software/repository/github/ebundhoo/TAGOPSIN", "api_url": "https://rseng.github.io/software/api/repos/github/ebundhoo/TAGOPSIN"}, {"uid": "github/akinremisa/rfsed", "html_url": "https://rseng.github.io/software/repository/github/akinremisa/rfsed", "api_url": "https://rseng.github.io/software/api/repos/github/akinremisa/rfsed"}, {"uid": "github/ExaScience/elprep", "html_url": "https://rseng.github.io/software/repository/github/ExaScience/elprep", "api_url": "https://rseng.github.io/software/api/repos/github/ExaScience/elprep"}, {"uid": "github/JamieDietrich/dynamite", "html_url": "https://rseng.github.io/software/repository/github/JamieDietrich/dynamite", "api_url": "https://rseng.github.io/software/api/repos/github/JamieDietrich/dynamite"}, {"uid": "github/yanzhanglab/Graph2GO", "html_url": "https://rseng.github.io/software/repository/github/yanzhanglab/Graph2GO", "api_url": "https://rseng.github.io/software/api/repos/github/yanzhanglab/Graph2GO"}, {"uid": "github/gabraham/flashpca", "html_url": "https://rseng.github.io/software/repository/github/gabraham/flashpca", "api_url": "https://rseng.github.io/software/api/repos/github/gabraham/flashpca"}, {"uid": "github/csb5/lofreq", "html_url": "https://rseng.github.io/software/repository/github/csb5/lofreq", "api_url": "https://rseng.github.io/software/api/repos/github/csb5/lofreq"}, {"uid": "github/sb-ncbr/golem", "html_url": "https://rseng.github.io/software/repository/github/sb-ncbr/golem", "api_url": "https://rseng.github.io/software/api/repos/github/sb-ncbr/golem"}, {"uid": "github/LBC-LNBio/parKVFinder-win", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/parKVFinder-win", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/parKVFinder-win"}, {"uid": "github/LBC-LNBio/pyKVFinder", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/pyKVFinder", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/pyKVFinder"}, {"uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/PyMOL-KVFinder-web-Tools"}, {"uid": "github/hsocasnavarro/NICOLE", "html_url": "https://rseng.github.io/software/repository/github/hsocasnavarro/NICOLE", "api_url": "https://rseng.github.io/software/api/repos/github/hsocasnavarro/NICOLE"}, {"uid": "github/ianvcaldas/smalldisco", "html_url": "https://rseng.github.io/software/repository/github/ianvcaldas/smalldisco", "api_url": "https://rseng.github.io/software/api/repos/github/ianvcaldas/smalldisco"}, {"uid": "github/johncwok/CategoricalTimeSeries.jl", "html_url": "https://rseng.github.io/software/repository/github/johncwok/CategoricalTimeSeries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/johncwok/CategoricalTimeSeries.jl"}, {"uid": "github/mne-tools/mne-lsl", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-lsl", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-lsl"}, {"uid": "github/mne-tools/mne-icalabel", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-icalabel", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-icalabel"}, {"uid": "github/mne-tools/mne-python", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-python", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-python"}, {"uid": "github/milkschen/leviosam2", "html_url": "https://rseng.github.io/software/repository/github/milkschen/leviosam2", "api_url": "https://rseng.github.io/software/api/repos/github/milkschen/leviosam2"}, {"uid": "github/gnave/pybranch", "html_url": "https://rseng.github.io/software/repository/github/gnave/pybranch", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/pybranch"}, {"uid": "github/gnave/Xgremlin", "html_url": "https://rseng.github.io/software/repository/github/gnave/Xgremlin", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/Xgremlin"}, {"uid": "github/NOSALRO/robot_dart", "html_url": "https://rseng.github.io/software/repository/github/NOSALRO/robot_dart", "api_url": "https://rseng.github.io/software/api/repos/github/NOSALRO/robot_dart"}, {"uid": "github/SSAGESproject/SSAGES", "html_url": "https://rseng.github.io/software/repository/github/SSAGESproject/SSAGES", "api_url": "https://rseng.github.io/software/api/repos/github/SSAGESproject/SSAGES"}, {"uid": "github/jeetsukumaran/DendroPy", "html_url": "https://rseng.github.io/software/repository/github/jeetsukumaran/DendroPy", "api_url": "https://rseng.github.io/software/api/repos/github/jeetsukumaran/DendroPy"}, {"uid": "github/ucl-exoplanets/pylightcurve", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/pylightcurve", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/pylightcurve"}, {"uid": "github/ucl-exoplanets/ExoGAN_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoGAN_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoGAN_public"}, {"uid": "github/ucl-exoplanets/TauREx3_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/TauREx3_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/TauREx3_public"}, {"uid": "github/ucl-exoplanets/ExoTETHyS", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoTETHyS", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoTETHyS"}, {"uid": "github/annehutter/grid-model", "html_url": "https://rseng.github.io/software/repository/github/annehutter/grid-model", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/grid-model"}, {"uid": "github/annehutter/polyspectrum", "html_url": "https://rseng.github.io/software/repository/github/annehutter/polyspectrum", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/polyspectrum"}, {"uid": "github/annehutter/astraeus", "html_url": "https://rseng.github.io/software/repository/github/annehutter/astraeus", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/astraeus"}, {"uid": "github/mosdef-hub/foyer", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/foyer", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/foyer"}, {"uid": "github/mosdef-hub/mbuild", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/mbuild", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/mbuild"}, {"uid": "github/hsso/crete", "html_url": "https://rseng.github.io/software/repository/github/hsso/crete", "api_url": "https://rseng.github.io/software/api/repos/github/hsso/crete"}, {"uid": "github/glis-glis/loci", "html_url": "https://rseng.github.io/software/repository/github/glis-glis/loci", "api_url": "https://rseng.github.io/software/api/repos/github/glis-glis/loci"}, {"uid": "github/PhenoApps/Coordinate", "html_url": "https://rseng.github.io/software/repository/github/PhenoApps/Coordinate", "api_url": "https://rseng.github.io/software/api/repos/github/PhenoApps/Coordinate"}, {"uid": "github/rordenlab/dcm2niix", "html_url": "https://rseng.github.io/software/repository/github/rordenlab/dcm2niix", "api_url": "https://rseng.github.io/software/api/repos/github/rordenlab/dcm2niix"}, {"uid": "github/iancze/DiskJockey", "html_url": "https://rseng.github.io/software/repository/github/iancze/DiskJockey", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/DiskJockey"}, {"uid": "github/iancze/PSOAP", "html_url": "https://rseng.github.io/software/repository/github/iancze/PSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/PSOAP"}, {"uid": "github/vsulis5357/Sonification", "html_url": "https://rseng.github.io/software/repository/github/vsulis5357/Sonification", "api_url": "https://rseng.github.io/software/api/repos/github/vsulis5357/Sonification"}, {"uid": "github/enthought/mayavi", "html_url": "https://rseng.github.io/software/repository/github/enthought/mayavi", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/mayavi"}, {"uid": "github/enthought/vpsearch", "html_url": "https://rseng.github.io/software/repository/github/enthought/vpsearch", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/vpsearch"}, {"uid": "github/tud-hri/travia", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/travia", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/travia"}, {"uid": "github/tud-hri/joan", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/joan", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/joan"}, {"uid": "github/gouverneurp/eVAS", "html_url": "https://rseng.github.io/software/repository/github/gouverneurp/eVAS", "api_url": "https://rseng.github.io/software/api/repos/github/gouverneurp/eVAS"}, {"uid": "github/jamesrhester/Lerche.jl", "html_url": "https://rseng.github.io/software/repository/github/jamesrhester/Lerche.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jamesrhester/Lerche.jl"}, {"uid": "github/moranegg/deposit-template", "html_url": "https://rseng.github.io/software/repository/github/moranegg/deposit-template", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/deposit-template"}, {"uid": "github/moranegg/AffectationRO", "html_url": "https://rseng.github.io/software/repository/github/moranegg/AffectationRO", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/AffectationRO"}, {"uid": "github/SolavLab/DuoDIC", "html_url": "https://rseng.github.io/software/repository/github/SolavLab/DuoDIC", "api_url": "https://rseng.github.io/software/api/repos/github/SolavLab/DuoDIC"}, {"uid": "github/stevengiacalone/triceratops", "html_url": "https://rseng.github.io/software/repository/github/stevengiacalone/triceratops", "api_url": "https://rseng.github.io/software/api/repos/github/stevengiacalone/triceratops"}, {"uid": "github/JelfsMaterialsGroup/stk", "html_url": "https://rseng.github.io/software/repository/github/JelfsMaterialsGroup/stk", "api_url": "https://rseng.github.io/software/api/repos/github/JelfsMaterialsGroup/stk"}, {"uid": "github/CmPA/iPic3D", "html_url": "https://rseng.github.io/software/repository/github/CmPA/iPic3D", "api_url": "https://rseng.github.io/software/api/repos/github/CmPA/iPic3D"}, {"uid": "github/mcgalcode/pylattica", "html_url": "https://rseng.github.io/software/repository/github/mcgalcode/pylattica", "api_url": "https://rseng.github.io/software/api/repos/github/mcgalcode/pylattica"}, {"uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", "html_url": "https://rseng.github.io/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasEdwardRiley/xpsi-pre-transfer"}, {"uid": "github/libdynd/dynd-python", "html_url": "https://rseng.github.io/software/repository/github/libdynd/dynd-python", "api_url": "https://rseng.github.io/software/api/repos/github/libdynd/dynd-python"}, {"uid": "github/Professor-G/MicroLIA", "html_url": "https://rseng.github.io/software/repository/github/Professor-G/MicroLIA", "api_url": "https://rseng.github.io/software/api/repos/github/Professor-G/MicroLIA"}, {"uid": "github/actris-cloudnet/mwrpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/mwrpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/mwrpy"}, {"uid": "github/actris-cloudnet/cloudnetpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/cloudnetpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/cloudnetpy"}, {"uid": "github/jo276/EvapMass", "html_url": "https://rseng.github.io/software/repository/github/jo276/EvapMass", "api_url": "https://rseng.github.io/software/api/repos/github/jo276/EvapMass"}, {"uid": "github/medema-group/bigslice", "html_url": "https://rseng.github.io/software/repository/github/medema-group/bigslice", "api_url": "https://rseng.github.io/software/api/repos/github/medema-group/bigslice"}, {"uid": "github/bhhua/vacuumtunneling", "html_url": "https://rseng.github.io/software/repository/github/bhhua/vacuumtunneling", "api_url": "https://rseng.github.io/software/api/repos/github/bhhua/vacuumtunneling"}, {"uid": "github/getzlab/rnaseqc", "html_url": "https://rseng.github.io/software/repository/github/getzlab/rnaseqc", "api_url": "https://rseng.github.io/software/api/repos/github/getzlab/rnaseqc"}, {"uid": "github/QuaCaTeam/quaca", "html_url": "https://rseng.github.io/software/repository/github/QuaCaTeam/quaca", "api_url": "https://rseng.github.io/software/api/repos/github/QuaCaTeam/quaca"}, {"uid": "github/cylammarco/ASPIRED", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/ASPIRED", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/ASPIRED"}, {"uid": "github/cylammarco/WDPhotTools", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/WDPhotTools", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/WDPhotTools"}, {"uid": "github/pangeo-data/climpred", "html_url": "https://rseng.github.io/software/repository/github/pangeo-data/climpred", "api_url": "https://rseng.github.io/software/api/repos/github/pangeo-data/climpred"}, {"uid": "github/lucabaldini/ixpeobssim", "html_url": "https://rseng.github.io/software/repository/github/lucabaldini/ixpeobssim", "api_url": "https://rseng.github.io/software/api/repos/github/lucabaldini/ixpeobssim"}, {"uid": "github/SchmollerLab/Cell_ACDC", "html_url": "https://rseng.github.io/software/repository/github/SchmollerLab/Cell_ACDC", "api_url": "https://rseng.github.io/software/api/repos/github/SchmollerLab/Cell_ACDC"}, {"uid": "github/ariedel/lacewing", "html_url": "https://rseng.github.io/software/repository/github/ariedel/lacewing", "api_url": "https://rseng.github.io/software/api/repos/github/ariedel/lacewing"}, {"uid": "github/cajohare/NeutrinoFog", "html_url": "https://rseng.github.io/software/repository/github/cajohare/NeutrinoFog", "api_url": "https://rseng.github.io/software/api/repos/github/cajohare/NeutrinoFog"}, {"uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "html_url": "https://rseng.github.io/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "api_url": "https://rseng.github.io/software/api/repos/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions"}, {"uid": "github/phenology/cgc", "html_url": "https://rseng.github.io/software/repository/github/phenology/cgc", "api_url": "https://rseng.github.io/software/api/repos/github/phenology/cgc"}, {"uid": "github/MarkMageeAstro/Riddler", "html_url": "https://rseng.github.io/software/repository/github/MarkMageeAstro/Riddler", "api_url": "https://rseng.github.io/software/api/repos/github/MarkMageeAstro/Riddler"}, {"uid": "github/oruhnau/when2heat", "html_url": "https://rseng.github.io/software/repository/github/oruhnau/when2heat", "api_url": "https://rseng.github.io/software/api/repos/github/oruhnau/when2heat"}, {"uid": "github/yangyanli/DO-Conv", "html_url": "https://rseng.github.io/software/repository/github/yangyanli/DO-Conv", "api_url": "https://rseng.github.io/software/api/repos/github/yangyanli/DO-Conv"}, {"uid": "github/y-256/libdivsufsort", "html_url": "https://rseng.github.io/software/repository/github/y-256/libdivsufsort", "api_url": "https://rseng.github.io/software/api/repos/github/y-256/libdivsufsort"}, {"uid": "github/pudeIko/piva", "html_url": "https://rseng.github.io/software/repository/github/pudeIko/piva", "api_url": "https://rseng.github.io/software/api/repos/github/pudeIko/piva"}, {"uid": "github/nicokurtovic/SIMIO", "html_url": "https://rseng.github.io/software/repository/github/nicokurtovic/SIMIO", "api_url": "https://rseng.github.io/software/api/repos/github/nicokurtovic/SIMIO"}, {"uid": "github/nye17/javelin", "html_url": "https://rseng.github.io/software/repository/github/nye17/javelin", "api_url": "https://rseng.github.io/software/api/repos/github/nye17/javelin"}, {"uid": "github/mrvollger/rustybam", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/rustybam", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/rustybam"}, {"uid": "github/mrvollger/fibertools-rs", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/fibertools-rs", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/fibertools-rs"}, {"uid": "github/rdicosmo/parmap", "html_url": "https://rseng.github.io/software/repository/github/rdicosmo/parmap", "api_url": "https://rseng.github.io/software/api/repos/github/rdicosmo/parmap"}, {"uid": "github/cagrikymk/JAX-ReaxFF", "html_url": "https://rseng.github.io/software/repository/github/cagrikymk/JAX-ReaxFF", "api_url": "https://rseng.github.io/software/api/repos/github/cagrikymk/JAX-ReaxFF"}, {"uid": "github/devsim/devsim", "html_url": "https://rseng.github.io/software/repository/github/devsim/devsim", "api_url": "https://rseng.github.io/software/api/repos/github/devsim/devsim"}, {"uid": "github/spack/spack", "html_url": "https://rseng.github.io/software/repository/github/spack/spack", "api_url": "https://rseng.github.io/software/api/repos/github/spack/spack"}, {"uid": "github/isakro/shoredate", "html_url": "https://rseng.github.io/software/repository/github/isakro/shoredate", "api_url": "https://rseng.github.io/software/api/repos/github/isakro/shoredate"}, {"uid": "github/HuttleyLab/scitrack", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/scitrack", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/scitrack"}, {"uid": "github/HuttleyLab/DiverseSeq", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/DiverseSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/DiverseSeq"}, {"uid": "github/ratschlab/metagraph", "html_url": "https://rseng.github.io/software/repository/github/ratschlab/metagraph", "api_url": "https://rseng.github.io/software/api/repos/github/ratschlab/metagraph"}, {"uid": "github/nlesc-sherlock/Rig", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/Rig", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/Rig"}, {"uid": "github/nlesc-sherlock/emma", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/emma", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/emma"}, {"uid": "github/FiorenSt/AutoSourceID-Light", "html_url": "https://rseng.github.io/software/repository/github/FiorenSt/AutoSourceID-Light", "api_url": "https://rseng.github.io/software/api/repos/github/FiorenSt/AutoSourceID-Light"}, {"uid": "github/nboley/idr", "html_url": "https://rseng.github.io/software/repository/github/nboley/idr", "api_url": "https://rseng.github.io/software/api/repos/github/nboley/idr"}, {"uid": "github/gmrandazzo/libscientific", "html_url": "https://rseng.github.io/software/repository/github/gmrandazzo/libscientific", "api_url": "https://rseng.github.io/software/api/repos/github/gmrandazzo/libscientific"}, {"uid": "github/WGS-TB/MentaLiST", "html_url": "https://rseng.github.io/software/repository/github/WGS-TB/MentaLiST", "api_url": "https://rseng.github.io/software/api/repos/github/WGS-TB/MentaLiST"}, {"uid": "github/jranalli/solartoolbox", "html_url": "https://rseng.github.io/software/repository/github/jranalli/solartoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/jranalli/solartoolbox"}, {"uid": "github/EigenDev/simbi", "html_url": "https://rseng.github.io/software/repository/github/EigenDev/simbi", "api_url": "https://rseng.github.io/software/api/repos/github/EigenDev/simbi"}, {"uid": "github/songlabcodes/MSC", "html_url": "https://rseng.github.io/software/repository/github/songlabcodes/MSC", "api_url": "https://rseng.github.io/software/api/repos/github/songlabcodes/MSC"}, {"uid": "github/JCGoran/coffe", "html_url": "https://rseng.github.io/software/repository/github/JCGoran/coffe", "api_url": "https://rseng.github.io/software/api/repos/github/JCGoran/coffe"}, {"uid": "github/jdhenshaw/scousepy", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/scousepy", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/scousepy"}, {"uid": "github/jdhenshaw/acorns", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/acorns", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/acorns"}, {"uid": "github/jdhenshaw/SCOUSE", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/SCOUSE", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/SCOUSE"}, {"uid": "github/isaackd/wcloud", "html_url": "https://rseng.github.io/software/repository/github/isaackd/wcloud", "api_url": "https://rseng.github.io/software/api/repos/github/isaackd/wcloud"}, {"uid": "github/wlloyduw/ContainerProfiler", "html_url": "https://rseng.github.io/software/repository/github/wlloyduw/ContainerProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/wlloyduw/ContainerProfiler"}, {"uid": "github/SynthSys/pyOmeroUpload", "html_url": "https://rseng.github.io/software/repository/github/SynthSys/pyOmeroUpload", "api_url": "https://rseng.github.io/software/api/repos/github/SynthSys/pyOmeroUpload"}, {"uid": "github/DeltaRCM/pyDeltaRCM", "html_url": "https://rseng.github.io/software/repository/github/DeltaRCM/pyDeltaRCM", "api_url": "https://rseng.github.io/software/api/repos/github/DeltaRCM/pyDeltaRCM"}, {"uid": "github/wangbingjie/sbi_pp", "html_url": "https://rseng.github.io/software/repository/github/wangbingjie/sbi_pp", "api_url": "https://rseng.github.io/software/api/repos/github/wangbingjie/sbi_pp"}, {"uid": "github/m-d-grunnill/MetaCast", "html_url": "https://rseng.github.io/software/repository/github/m-d-grunnill/MetaCast", "api_url": "https://rseng.github.io/software/api/repos/github/m-d-grunnill/MetaCast"}, {"uid": "github/JuliaQX/QXTools.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQX/QXTools.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQX/QXTools.jl"}, {"uid": "github/holmescao/ANTS_marking_and_analysis_tools", "html_url": "https://rseng.github.io/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", "api_url": "https://rseng.github.io/software/api/repos/github/holmescao/ANTS_marking_and_analysis_tools"}, {"uid": "github/PSims/BayesEoR", "html_url": "https://rseng.github.io/software/repository/github/PSims/BayesEoR", "api_url": "https://rseng.github.io/software/api/repos/github/PSims/BayesEoR"}, {"uid": "github/molscat/molscat", "html_url": "https://rseng.github.io/software/repository/github/molscat/molscat", "api_url": "https://rseng.github.io/software/api/repos/github/molscat/molscat"}, {"uid": "github/mberto79/XCALibre.jl", "html_url": "https://rseng.github.io/software/repository/github/mberto79/XCALibre.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mberto79/XCALibre.jl"}, {"uid": "github/neuroanatomy/thresholdmann", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/thresholdmann", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/thresholdmann"}, {"uid": "github/neuroanatomy/reorient", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/reorient", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/reorient"}, {"uid": "github/hanyk/BayeSED3", "html_url": "https://rseng.github.io/software/repository/github/hanyk/BayeSED3", "api_url": "https://rseng.github.io/software/api/repos/github/hanyk/BayeSED3"}, {"uid": "github/sidmohite/nimbus-astro", "html_url": "https://rseng.github.io/software/repository/github/sidmohite/nimbus-astro", "api_url": "https://rseng.github.io/software/api/repos/github/sidmohite/nimbus-astro"}, {"uid": "github/Wimmics/olivaw", "html_url": "https://rseng.github.io/software/repository/github/Wimmics/olivaw", "api_url": "https://rseng.github.io/software/api/repos/github/Wimmics/olivaw"}, {"uid": "github/dcorre/otrain", "html_url": "https://rseng.github.io/software/repository/github/dcorre/otrain", "api_url": "https://rseng.github.io/software/api/repos/github/dcorre/otrain"}, {"uid": "github/AlanRace/imzMLConverter", "html_url": "https://rseng.github.io/software/repository/github/AlanRace/imzMLConverter", "api_url": "https://rseng.github.io/software/api/repos/github/AlanRace/imzMLConverter"}, {"uid": "github/transientskp/pyse", "html_url": "https://rseng.github.io/software/repository/github/transientskp/pyse", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/pyse"}, {"uid": "github/transientskp/lpf", "html_url": "https://rseng.github.io/software/repository/github/transientskp/lpf", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/lpf"}, {"uid": "github/transientskp/tkp", "html_url": "https://rseng.github.io/software/repository/github/transientskp/tkp", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/tkp"}, {"uid": "github/sonjageorgievska/CClusTera", "html_url": "https://rseng.github.io/software/repository/github/sonjageorgievska/CClusTera", "api_url": "https://rseng.github.io/software/api/repos/github/sonjageorgievska/CClusTera"}, {"uid": "github/Sudaraka88/LDWeaver", "html_url": "https://rseng.github.io/software/repository/github/Sudaraka88/LDWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/Sudaraka88/LDWeaver"}, {"uid": "github/achaikova/frbmclust", "html_url": "https://rseng.github.io/software/repository/github/achaikova/frbmclust", "api_url": "https://rseng.github.io/software/api/repos/github/achaikova/frbmclust"}, {"uid": "github/cran/irtplay", "html_url": "https://rseng.github.io/software/repository/github/cran/irtplay", "api_url": "https://rseng.github.io/software/api/repos/github/cran/irtplay"}, {"uid": "github/SGpp/DisCoTec", "html_url": "https://rseng.github.io/software/repository/github/SGpp/DisCoTec", "api_url": "https://rseng.github.io/software/api/repos/github/SGpp/DisCoTec"}, {"uid": "github/mjcarley/nbi", "html_url": "https://rseng.github.io/software/repository/github/mjcarley/nbi", "api_url": "https://rseng.github.io/software/api/repos/github/mjcarley/nbi"}, {"uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "html_url": "https://rseng.github.io/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/leonidprinceton/LightweightSpaceCoronagraphSimulator"}, {"uid": "github/rbturnbull/ausdex", "html_url": "https://rseng.github.io/software/repository/github/rbturnbull/ausdex", "api_url": "https://rseng.github.io/software/api/repos/github/rbturnbull/ausdex"}, {"uid": "github/Nic5472K/ScientificData2021_HealthGym", "html_url": "https://rseng.github.io/software/repository/github/Nic5472K/ScientificData2021_HealthGym", "api_url": "https://rseng.github.io/software/api/repos/github/Nic5472K/ScientificData2021_HealthGym"}, {"uid": "github/lastz/lastz", "html_url": "https://rseng.github.io/software/repository/github/lastz/lastz", "api_url": "https://rseng.github.io/software/api/repos/github/lastz/lastz"}, {"uid": "github/singularityhub/singularity-hpc", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-hpc", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-hpc"}, {"uid": "github/singularityhub/singularity-compose", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-compose", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-compose"}, {"uid": "github/singularityhub/sregistry", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/sregistry", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/sregistry"}, {"uid": "github/biomed-AI/GraphBepi", "html_url": "https://rseng.github.io/software/repository/github/biomed-AI/GraphBepi", "api_url": "https://rseng.github.io/software/api/repos/github/biomed-AI/GraphBepi"}, {"uid": "github/ZhantianXu/PISAD", "html_url": "https://rseng.github.io/software/repository/github/ZhantianXu/PISAD", "api_url": "https://rseng.github.io/software/api/repos/github/ZhantianXu/PISAD"}, {"uid": "github/StingraySoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/stingray"}, {"uid": "github/StingraySoftware/HENDRICS", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/HENDRICS", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/HENDRICS"}, {"uid": "github/abelson-lab/smMIP-tools", "html_url": "https://rseng.github.io/software/repository/github/abelson-lab/smMIP-tools", "api_url": "https://rseng.github.io/software/api/repos/github/abelson-lab/smMIP-tools"}, {"uid": "github/Novartis/torchsurv", "html_url": "https://rseng.github.io/software/repository/github/Novartis/torchsurv", "api_url": "https://rseng.github.io/software/api/repos/github/Novartis/torchsurv"}, {"uid": "github/segasai/q3c", "html_url": "https://rseng.github.io/software/repository/github/segasai/q3c", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/q3c"}, {"uid": "github/segasai/rvspecfit", "html_url": "https://rseng.github.io/software/repository/github/segasai/rvspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/rvspecfit"}, {"uid": "github/Ge-Lab/USAT", "html_url": "https://rseng.github.io/software/repository/github/Ge-Lab/USAT", "api_url": "https://rseng.github.io/software/api/repos/github/Ge-Lab/USAT"}, {"uid": "github/nhcrisp/ADBSat", "html_url": "https://rseng.github.io/software/repository/github/nhcrisp/ADBSat", "api_url": "https://rseng.github.io/software/api/repos/github/nhcrisp/ADBSat"}, {"uid": "github/BASTAcode/BASTA", "html_url": "https://rseng.github.io/software/repository/github/BASTAcode/BASTA", "api_url": "https://rseng.github.io/software/api/repos/github/BASTAcode/BASTA"}, {"uid": "github/insilicomedicine/GENTRL", "html_url": "https://rseng.github.io/software/repository/github/insilicomedicine/GENTRL", "api_url": "https://rseng.github.io/software/api/repos/github/insilicomedicine/GENTRL"}, {"uid": "github/swiftsim/swiftsimio", "html_url": "https://rseng.github.io/software/repository/github/swiftsim/swiftsimio", "api_url": "https://rseng.github.io/software/api/repos/github/swiftsim/swiftsimio"}, {"uid": "github/timchurches/NetEpi-Collection", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Collection", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Collection"}, {"uid": "github/timchurches/NetEpi-Analysis", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Analysis"}, {"uid": "github/biocore-ntnu/epic2", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/epic2", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/epic2"}, {"uid": "github/biocore-ntnu/ncls", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/ncls", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/ncls"}, {"uid": "github/biocore-ntnu/pyranges", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/pyranges", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/pyranges"}, {"uid": "github/Valar-hub/MMLPhoto-z", "html_url": "https://rseng.github.io/software/repository/github/Valar-hub/MMLPhoto-z", "api_url": "https://rseng.github.io/software/api/repos/github/Valar-hub/MMLPhoto-z"}, {"uid": "github/dputhier/pygtftk", "html_url": "https://rseng.github.io/software/repository/github/dputhier/pygtftk", "api_url": "https://rseng.github.io/software/api/repos/github/dputhier/pygtftk"}, {"uid": "github/MetaCell/scicrunch-antibody-registry", "html_url": "https://rseng.github.io/software/repository/github/MetaCell/scicrunch-antibody-registry", "api_url": "https://rseng.github.io/software/api/repos/github/MetaCell/scicrunch-antibody-registry"}, {"uid": "github/bhi-kimlab/StressGenePred", "html_url": "https://rseng.github.io/software/repository/github/bhi-kimlab/StressGenePred", "api_url": "https://rseng.github.io/software/api/repos/github/bhi-kimlab/StressGenePred"}, {"uid": "github/drphilmarshall/HumVI", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/HumVI", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/HumVI"}, {"uid": "github/drphilmarshall/Pangloss", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/Pangloss", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/Pangloss"}, {"uid": "github/dunhamlab/PacRAT", "html_url": "https://rseng.github.io/software/repository/github/dunhamlab/PacRAT", "api_url": "https://rseng.github.io/software/api/repos/github/dunhamlab/PacRAT"}, {"uid": "github/rchartra/NcCut", "html_url": "https://rseng.github.io/software/repository/github/rchartra/NcCut", "api_url": "https://rseng.github.io/software/api/repos/github/rchartra/NcCut"}, {"uid": "github/blackrim/phyutility", "html_url": "https://rseng.github.io/software/repository/github/blackrim/phyutility", "api_url": "https://rseng.github.io/software/api/repos/github/blackrim/phyutility"}, {"uid": "github/bioinfo-center-pasteur-fr/toppred", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-center-pasteur-fr/toppred", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-center-pasteur-fr/toppred"}, {"uid": "github/matthiasfabry/spinOS", "html_url": "https://rseng.github.io/software/repository/github/matthiasfabry/spinOS", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasfabry/spinOS"}, {"uid": "github/Yu606/odyssey", "html_url": "https://rseng.github.io/software/repository/github/Yu606/odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/Yu606/odyssey"}, {"uid": "github/dutilh/CAT", "html_url": "https://rseng.github.io/software/repository/github/dutilh/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/dutilh/CAT"}, {"uid": "github/pec27/hfof", "html_url": "https://rseng.github.io/software/repository/github/pec27/hfof", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/hfof"}, {"uid": "github/pec27/lizard", "html_url": "https://rseng.github.io/software/repository/github/pec27/lizard", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/lizard"}, {"uid": "github/pec27/smerfs", "html_url": "https://rseng.github.io/software/repository/github/pec27/smerfs", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/smerfs"}, {"uid": "github/EskelandLab/ShinyArchRUiO", "html_url": "https://rseng.github.io/software/repository/github/EskelandLab/ShinyArchRUiO", "api_url": "https://rseng.github.io/software/api/repos/github/EskelandLab/ShinyArchRUiO"}, {"uid": "github/alexdaniel654/qlayers", "html_url": "https://rseng.github.io/software/repository/github/alexdaniel654/qlayers", "api_url": "https://rseng.github.io/software/api/repos/github/alexdaniel654/qlayers"}, {"uid": "github/QuackenbushLab/NetworkDataCompanion", "html_url": "https://rseng.github.io/software/repository/github/QuackenbushLab/NetworkDataCompanion", "api_url": "https://rseng.github.io/software/api/repos/github/QuackenbushLab/NetworkDataCompanion"}, {"uid": "github/changliao1025/pyflowline", "html_url": "https://rseng.github.io/software/repository/github/changliao1025/pyflowline", "api_url": "https://rseng.github.io/software/api/repos/github/changliao1025/pyflowline"}, {"uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "html_url": "https://rseng.github.io/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "api_url": "https://rseng.github.io/software/api/repos/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022"}, {"uid": "github/epiforecasts/covidregionaldata", "html_url": "https://rseng.github.io/software/repository/github/epiforecasts/covidregionaldata", "api_url": "https://rseng.github.io/software/api/repos/github/epiforecasts/covidregionaldata"}, {"uid": "github/an0wen/MARDIGRAS", "html_url": "https://rseng.github.io/software/repository/github/an0wen/MARDIGRAS", "api_url": "https://rseng.github.io/software/api/repos/github/an0wen/MARDIGRAS"}, {"uid": "github/ankilab/EvoVis", "html_url": "https://rseng.github.io/software/repository/github/ankilab/EvoVis", "api_url": "https://rseng.github.io/software/api/repos/github/ankilab/EvoVis"}, {"uid": "github/SoFiA-Admin/SoFiA-2", "html_url": "https://rseng.github.io/software/repository/github/SoFiA-Admin/SoFiA-2", "api_url": "https://rseng.github.io/software/api/repos/github/SoFiA-Admin/SoFiA-2"}, {"uid": "github/bayzidlab/SAINT-Angle", "html_url": "https://rseng.github.io/software/repository/github/bayzidlab/SAINT-Angle", "api_url": "https://rseng.github.io/software/api/repos/github/bayzidlab/SAINT-Angle"}, {"uid": "github/tmux/tmux", "html_url": "https://rseng.github.io/software/repository/github/tmux/tmux", "api_url": "https://rseng.github.io/software/api/repos/github/tmux/tmux"}, {"uid": "github/bbfrederick/stabilitycalc", "html_url": "https://rseng.github.io/software/repository/github/bbfrederick/stabilitycalc", "api_url": "https://rseng.github.io/software/api/repos/github/bbfrederick/stabilitycalc"}, {"uid": "github/dalipconstant/dalip-estimator", "html_url": "https://rseng.github.io/software/repository/github/dalipconstant/dalip-estimator", "api_url": "https://rseng.github.io/software/api/repos/github/dalipconstant/dalip-estimator"}, {"uid": "github/ksahlin/strobealign", "html_url": "https://rseng.github.io/software/repository/github/ksahlin/strobealign", "api_url": "https://rseng.github.io/software/api/repos/github/ksahlin/strobealign"}, {"uid": "github/me-manu/gammaALPs", "html_url": "https://rseng.github.io/software/repository/github/me-manu/gammaALPs", "api_url": "https://rseng.github.io/software/api/repos/github/me-manu/gammaALPs"}, {"uid": "github/mzytnicki/srnaMapper", "html_url": "https://rseng.github.io/software/repository/github/mzytnicki/srnaMapper", "api_url": "https://rseng.github.io/software/api/repos/github/mzytnicki/srnaMapper"}, {"uid": "github/niemasd/CoaTran", "html_url": "https://rseng.github.io/software/repository/github/niemasd/CoaTran", "api_url": "https://rseng.github.io/software/api/repos/github/niemasd/CoaTran"}, {"uid": "github/metagenopolis/CroCoDeEL", "html_url": "https://rseng.github.io/software/repository/github/metagenopolis/CroCoDeEL", "api_url": "https://rseng.github.io/software/api/repos/github/metagenopolis/CroCoDeEL"}, {"uid": "github/ndaniyar/aphot", "html_url": "https://rseng.github.io/software/repository/github/ndaniyar/aphot", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniyar/aphot"}, {"uid": "github/sfarrens/sf_deconvolve", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sf_deconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sf_deconvolve"}, {"uid": "github/sfarrens/sfof", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sfof", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sfof"}, {"uid": "github/jteutenberg/downpore", "html_url": "https://rseng.github.io/software/repository/github/jteutenberg/downpore", "api_url": "https://rseng.github.io/software/api/repos/github/jteutenberg/downpore"}, {"uid": "github/HEAP-EXPOSOME/KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/KITE"}, {"uid": "github/HEAP-EXPOSOME/hopsworks-chef", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks-chef"}, {"uid": "github/HEAP-EXPOSOME/hopsworks", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks"}, {"uid": "github/HEAP-EXPOSOME/metagenomics-ML", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/metagenomics-ML"}, {"uid": "github/HEAP-EXPOSOME/streaming-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/streaming-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/streaming-demo"}, {"uid": "github/HEAP-EXPOSOME/exposome-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/exposome-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/exposome-demo"}, {"uid": "github/HEAP-EXPOSOME/HPV-meta", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-meta", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-meta"}, {"uid": "github/HEAP-EXPOSOME/biopipe", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/biopipe", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/biopipe"}, {"uid": "github/HEAP-EXPOSOME/HPV-KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-KITE"}, {"uid": "github/HEAP-EXPOSOME/ConsumerData", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/ConsumerData", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/ConsumerData"}, {"uid": "github/inesbmartins02/HYMET", "html_url": "https://rseng.github.io/software/repository/github/inesbmartins02/HYMET", "api_url": "https://rseng.github.io/software/api/repos/github/inesbmartins02/HYMET"}, {"uid": "github/paucablop/chemotools", "html_url": "https://rseng.github.io/software/repository/github/paucablop/chemotools", "api_url": "https://rseng.github.io/software/api/repos/github/paucablop/chemotools"}, {"uid": "github/iosefa/PyForestScan", "html_url": "https://rseng.github.io/software/repository/github/iosefa/PyForestScan", "api_url": "https://rseng.github.io/software/api/repos/github/iosefa/PyForestScan"}, {"uid": "github/EvolBioInf/phylonium", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/phylonium", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/phylonium"}, {"uid": "github/EvolBioInf/andi", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/andi", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/andi"}, {"uid": "github/vgl-hub/gfastats", "html_url": "https://rseng.github.io/software/repository/github/vgl-hub/gfastats", "api_url": "https://rseng.github.io/software/api/repos/github/vgl-hub/gfastats"}, {"uid": "github/minkailin/stratsi", "html_url": "https://rseng.github.io/software/repository/github/minkailin/stratsi", "api_url": "https://rseng.github.io/software/api/repos/github/minkailin/stratsi"}, {"uid": "github/eaobservatory/jcmt_coadd", "html_url": "https://rseng.github.io/software/repository/github/eaobservatory/jcmt_coadd", "api_url": "https://rseng.github.io/software/api/repos/github/eaobservatory/jcmt_coadd"}, {"uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole"}, {"uid": "github/eXtremeGravityInstitute/QuickCBC", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/QuickCBC", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/QuickCBC"}, {"uid": "github/vaexio/vaex", "html_url": "https://rseng.github.io/software/repository/github/vaexio/vaex", "api_url": "https://rseng.github.io/software/api/repos/github/vaexio/vaex"}, {"uid": "github/ARC-OPT/wbc", "html_url": "https://rseng.github.io/software/repository/github/ARC-OPT/wbc", "api_url": "https://rseng.github.io/software/api/repos/github/ARC-OPT/wbc"}, {"uid": "github/Ensembl/WiggleTools", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/WiggleTools", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/WiggleTools"}, {"uid": "github/Ensembl/ensembl-vep", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/ensembl-vep", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/ensembl-vep"}, {"uid": "github/HajimeKawahara/sot", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/sot", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/sot"}, {"uid": "github/HajimeKawahara/juwvid", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/juwvid", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/juwvid"}, {"uid": "github/HajimeKawahara/exojax", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/exojax", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/exojax"}, {"uid": "github/VasuLab/rgfrosh", "html_url": "https://rseng.github.io/software/repository/github/VasuLab/rgfrosh", "api_url": "https://rseng.github.io/software/api/repos/github/VasuLab/rgfrosh"}, {"uid": "github/cespinosa/pyHIIexplorerV2", "html_url": "https://rseng.github.io/software/repository/github/cespinosa/pyHIIexplorerV2", "api_url": "https://rseng.github.io/software/api/repos/github/cespinosa/pyHIIexplorerV2"}, {"uid": "github/JKoblitz/DSMZCellDive", "html_url": "https://rseng.github.io/software/repository/github/JKoblitz/DSMZCellDive", "api_url": "https://rseng.github.io/software/api/repos/github/JKoblitz/DSMZCellDive"}, {"uid": "github/alesantuz/musclesyneRgies", "html_url": "https://rseng.github.io/software/repository/github/alesantuz/musclesyneRgies", "api_url": "https://rseng.github.io/software/api/repos/github/alesantuz/musclesyneRgies"}, {"uid": "github/SwiftVISA/SwiftVISASwift", "html_url": "https://rseng.github.io/software/repository/github/SwiftVISA/SwiftVISASwift", "api_url": "https://rseng.github.io/software/api/repos/github/SwiftVISA/SwiftVISASwift"}, {"uid": "github/umbramortem/nProFit", "html_url": "https://rseng.github.io/software/repository/github/umbramortem/nProFit", "api_url": "https://rseng.github.io/software/api/repos/github/umbramortem/nProFit"}, {"uid": "github/igvteam/igv-reports", "html_url": "https://rseng.github.io/software/repository/github/igvteam/igv-reports", "api_url": "https://rseng.github.io/software/api/repos/github/igvteam/igv-reports"}, {"uid": "github/expressionanalysis/ea-utils", "html_url": "https://rseng.github.io/software/repository/github/expressionanalysis/ea-utils", "api_url": "https://rseng.github.io/software/api/repos/github/expressionanalysis/ea-utils"}, {"uid": "github/abhisrkckl/GWecc", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/GWecc", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/GWecc"}, {"uid": "github/abhisrkckl/Vela.jl", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/Vela.jl", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/Vela.jl"}, {"uid": "github/Yomguithereal/talisman", "html_url": "https://rseng.github.io/software/repository/github/Yomguithereal/talisman", "api_url": "https://rseng.github.io/software/api/repos/github/Yomguithereal/talisman"}, {"uid": "github/galizia-lab/pyview", "html_url": "https://rseng.github.io/software/repository/github/galizia-lab/pyview", "api_url": "https://rseng.github.io/software/api/repos/github/galizia-lab/pyview"}, {"uid": "github/Kuifje02/vrpy", "html_url": "https://rseng.github.io/software/repository/github/Kuifje02/vrpy", "api_url": "https://rseng.github.io/software/api/repos/github/Kuifje02/vrpy"}, {"uid": "github/alan-turing-institute/Palaeoanalytics", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/Palaeoanalytics", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/Palaeoanalytics"}, {"uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/monitoring-ecosystem-resilience"}, {"uid": "github/alan-turing-institute/setvis", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/setvis", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/setvis"}, {"uid": "github/alan-turing-institute/MLJ.jl", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/MLJ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/MLJ.jl"}, {"uid": "github/alan-turing-institute/autoemulate", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/autoemulate", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/autoemulate"}, {"uid": "github/alan-turing-institute/DetectorChecker", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/DetectorChecker", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/DetectorChecker"}, {"uid": "github/standage/AEGeAn", "html_url": "https://rseng.github.io/software/repository/github/standage/AEGeAn", "api_url": "https://rseng.github.io/software/api/repos/github/standage/AEGeAn"}, {"uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", "html_url": "https://rseng.github.io/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", "api_url": "https://rseng.github.io/software/api/repos/github/earth-metabolome-initiative/earth_metabolome_ontology"}, {"uid": "github/eScatter/pyelsepa", "html_url": "https://rseng.github.io/software/repository/github/eScatter/pyelsepa", "api_url": "https://rseng.github.io/software/api/repos/github/eScatter/pyelsepa"}, {"uid": "github/JeremyLezmy/hypergal", "html_url": "https://rseng.github.io/software/repository/github/JeremyLezmy/hypergal", "api_url": "https://rseng.github.io/software/api/repos/github/JeremyLezmy/hypergal"}, {"uid": "github/mariogrs/Simfast21", "html_url": "https://rseng.github.io/software/repository/github/mariogrs/Simfast21", "api_url": "https://rseng.github.io/software/api/repos/github/mariogrs/Simfast21"}, {"uid": "github/Filter-Bubble/stroll", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/stroll", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/stroll"}, {"uid": "github/Filter-Bubble/e2e-Dutch", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/e2e-Dutch", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/e2e-Dutch"}, {"uid": "github/goualard-f/MicroFloatingPoints.jl", "html_url": "https://rseng.github.io/software/repository/github/goualard-f/MicroFloatingPoints.jl", "api_url": "https://rseng.github.io/software/api/repos/github/goualard-f/MicroFloatingPoints.jl"}, {"uid": "github/FofanovLab/mtsv_tools", "html_url": "https://rseng.github.io/software/repository/github/FofanovLab/mtsv_tools", "api_url": "https://rseng.github.io/software/api/repos/github/FofanovLab/mtsv_tools"}, {"uid": "github/TheMillerLab/genetex", "html_url": "https://rseng.github.io/software/repository/github/TheMillerLab/genetex", "api_url": "https://rseng.github.io/software/api/repos/github/TheMillerLab/genetex"}, {"uid": "github/cb-geo/mpm", "html_url": "https://rseng.github.io/software/repository/github/cb-geo/mpm", "api_url": "https://rseng.github.io/software/api/repos/github/cb-geo/mpm"}, {"uid": "github/ruanjue/wtdbg2", "html_url": "https://rseng.github.io/software/repository/github/ruanjue/wtdbg2", "api_url": "https://rseng.github.io/software/api/repos/github/ruanjue/wtdbg2"}, {"uid": "github/mikaelLEROY/AxionNS_RayTracing", "html_url": "https://rseng.github.io/software/repository/github/mikaelLEROY/AxionNS_RayTracing", "api_url": "https://rseng.github.io/software/api/repos/github/mikaelLEROY/AxionNS_RayTracing"}, {"uid": "github/mkplummer/Imber", "html_url": "https://rseng.github.io/software/repository/github/mkplummer/Imber", "api_url": "https://rseng.github.io/software/api/repos/github/mkplummer/Imber"}, {"uid": "github/graphnet-team/graphnet", "html_url": "https://rseng.github.io/software/repository/github/graphnet-team/graphnet", "api_url": "https://rseng.github.io/software/api/repos/github/graphnet-team/graphnet"}, {"uid": "github/alchemistry/alchemlyb", "html_url": "https://rseng.github.io/software/repository/github/alchemistry/alchemlyb", "api_url": "https://rseng.github.io/software/api/repos/github/alchemistry/alchemlyb"}, {"uid": "github/temken/DaMaSCUS-SUN", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-SUN", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-SUN"}, {"uid": "github/temken/obscura", "html_url": "https://rseng.github.io/software/repository/github/temken/obscura", "api_url": "https://rseng.github.io/software/api/repos/github/temken/obscura"}, {"uid": "github/temken/DarkARC", "html_url": "https://rseng.github.io/software/repository/github/temken/DarkARC", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DarkARC"}, {"uid": "github/temken/Dirac_vs_Majorana", "html_url": "https://rseng.github.io/software/repository/github/temken/Dirac_vs_Majorana", "api_url": "https://rseng.github.io/software/api/repos/github/temken/Dirac_vs_Majorana"}, {"uid": "github/temken/DaMaSCUS-CRUST", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-CRUST", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-CRUST"}, {"uid": "github/temken/DaMaSCUS", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS"}, {"uid": "github/N-Wouda/ALNS", "html_url": "https://rseng.github.io/software/repository/github/N-Wouda/ALNS", "api_url": "https://rseng.github.io/software/api/repos/github/N-Wouda/ALNS"}, {"uid": "github/qtltools/qtltools", "html_url": "https://rseng.github.io/software/repository/github/qtltools/qtltools", "api_url": "https://rseng.github.io/software/api/repos/github/qtltools/qtltools"}, {"uid": "github/lkreidberg/batman", "html_url": "https://rseng.github.io/software/repository/github/lkreidberg/batman", "api_url": "https://rseng.github.io/software/api/repos/github/lkreidberg/batman"}, {"uid": "github/idruglab/hignn", "html_url": "https://rseng.github.io/software/repository/github/idruglab/hignn", "api_url": "https://rseng.github.io/software/api/repos/github/idruglab/hignn"}, {"uid": "github/volkamerlab/opencadd", "html_url": "https://rseng.github.io/software/repository/github/volkamerlab/opencadd", "api_url": "https://rseng.github.io/software/api/repos/github/volkamerlab/opencadd"}, {"uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/LoadProfileGenerator"}, {"uid": "github/FZJ-IEK3-VSA/FINE", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/FINE", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/FINE"}, {"uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/ETHOS_PeNALPS"}, {"uid": "github/SCECcode/pycsep", "html_url": "https://rseng.github.io/software/repository/github/SCECcode/pycsep", "api_url": "https://rseng.github.io/software/api/repos/github/SCECcode/pycsep"}, {"uid": "github/mkelley/zchecker", "html_url": "https://rseng.github.io/software/repository/github/mkelley/zchecker", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/zchecker"}, {"uid": "github/mkelley/calviacat", "html_url": "https://rseng.github.io/software/repository/github/mkelley/calviacat", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/calviacat"}, {"uid": "github/qiime2/q2-vsearch", "html_url": "https://rseng.github.io/software/repository/github/qiime2/q2-vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/qiime2/q2-vsearch"}, {"uid": "github/megbedell/wobble", "html_url": "https://rseng.github.io/software/repository/github/megbedell/wobble", "api_url": "https://rseng.github.io/software/api/repos/github/megbedell/wobble"}, {"uid": "github/bobleesj/cifkit", "html_url": "https://rseng.github.io/software/repository/github/bobleesj/cifkit", "api_url": "https://rseng.github.io/software/api/repos/github/bobleesj/cifkit"}, {"uid": "github/alastair-droop/fqtools", "html_url": "https://rseng.github.io/software/repository/github/alastair-droop/fqtools", "api_url": "https://rseng.github.io/software/api/repos/github/alastair-droop/fqtools"}, {"uid": "github/YuSugihara/MutMap", "html_url": "https://rseng.github.io/software/repository/github/YuSugihara/MutMap", "api_url": "https://rseng.github.io/software/api/repos/github/YuSugihara/MutMap"}, {"uid": "github/ipython/ipython", "html_url": "https://rseng.github.io/software/repository/github/ipython/ipython", "api_url": "https://rseng.github.io/software/api/repos/github/ipython/ipython"}, {"uid": "github/halomod/halomod", "html_url": "https://rseng.github.io/software/repository/github/halomod/halomod", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/halomod"}, {"uid": "github/halomod/hmf", "html_url": "https://rseng.github.io/software/repository/github/halomod/hmf", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/hmf"}, {"uid": "github/OFFIS-DAI/Mango.jl", "html_url": "https://rseng.github.io/software/repository/github/OFFIS-DAI/Mango.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OFFIS-DAI/Mango.jl"}, {"uid": "github/zclaytor/kiauhoku", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/kiauhoku", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/kiauhoku"}, {"uid": "github/zclaytor/butterpy", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/butterpy", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/butterpy"}, {"uid": "github/BayraktarLab/cell2location", "html_url": "https://rseng.github.io/software/repository/github/BayraktarLab/cell2location", "api_url": "https://rseng.github.io/software/api/repos/github/BayraktarLab/cell2location"}, {"uid": "github/GaryBAYLOR/mixR", "html_url": "https://rseng.github.io/software/repository/github/GaryBAYLOR/mixR", "api_url": "https://rseng.github.io/software/api/repos/github/GaryBAYLOR/mixR"}, {"uid": "github/unibe-icelab/thz-image-explorer", "html_url": "https://rseng.github.io/software/repository/github/unibe-icelab/thz-image-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/unibe-icelab/thz-image-explorer"}, {"uid": "github/smirarab/pasta", "html_url": "https://rseng.github.io/software/repository/github/smirarab/pasta", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/pasta"}, {"uid": "github/smirarab/sepp", "html_url": "https://rseng.github.io/software/repository/github/smirarab/sepp", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/sepp"}, {"uid": "github/joshuakt/Oxygen-False-Positives", "html_url": "https://rseng.github.io/software/repository/github/joshuakt/Oxygen-False-Positives", "api_url": "https://rseng.github.io/software/api/repos/github/joshuakt/Oxygen-False-Positives"}, {"uid": "github/gbouras13/plassembler", "html_url": "https://rseng.github.io/software/repository/github/gbouras13/plassembler", "api_url": "https://rseng.github.io/software/api/repos/github/gbouras13/plassembler"}, {"uid": "github/copasi/COPASI", "html_url": "https://rseng.github.io/software/repository/github/copasi/COPASI", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/COPASI"}, {"uid": "github/copasi/basico", "html_url": "https://rseng.github.io/software/repository/github/copasi/basico", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/basico"}, {"uid": "github/ABM4ALL/Melodie", "html_url": "https://rseng.github.io/software/repository/github/ABM4ALL/Melodie", "api_url": "https://rseng.github.io/software/api/repos/github/ABM4ALL/Melodie"}, {"uid": "github/qpv-research-group/solcore5", "html_url": "https://rseng.github.io/software/repository/github/qpv-research-group/solcore5", "api_url": "https://rseng.github.io/software/api/repos/github/qpv-research-group/solcore5"}, {"uid": "github/bauer-alex/fuzzyclara", "html_url": "https://rseng.github.io/software/repository/github/bauer-alex/fuzzyclara", "api_url": "https://rseng.github.io/software/api/repos/github/bauer-alex/fuzzyclara"}, {"uid": "github/tikk3r/lofar-h5plot", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/lofar-h5plot", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/lofar-h5plot"}, {"uid": "github/tikk3r/legacystamps", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/legacystamps", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/legacystamps"}, {"uid": "github/ArneTillmann/AuDoLab", "html_url": "https://rseng.github.io/software/repository/github/ArneTillmann/AuDoLab", "api_url": "https://rseng.github.io/software/api/repos/github/ArneTillmann/AuDoLab"}, {"uid": "github/jpmens/jo", "html_url": "https://rseng.github.io/software/repository/github/jpmens/jo", "api_url": "https://rseng.github.io/software/api/repos/github/jpmens/jo"}, {"uid": "github/OP2/PyOP2", "html_url": "https://rseng.github.io/software/repository/github/OP2/PyOP2", "api_url": "https://rseng.github.io/software/api/repos/github/OP2/PyOP2"}, {"uid": "github/epruesse/SINA", "html_url": "https://rseng.github.io/software/repository/github/epruesse/SINA", "api_url": "https://rseng.github.io/software/api/repos/github/epruesse/SINA"}, {"uid": "github/pyccel/pyccel", "html_url": "https://rseng.github.io/software/repository/github/pyccel/pyccel", "api_url": "https://rseng.github.io/software/api/repos/github/pyccel/pyccel"}, {"uid": "github/linqs/psl", "html_url": "https://rseng.github.io/software/repository/github/linqs/psl", "api_url": "https://rseng.github.io/software/api/repos/github/linqs/psl"}, {"uid": "github/ebi-jdispatcher/taxonomy-resolver", "html_url": "https://rseng.github.io/software/repository/github/ebi-jdispatcher/taxonomy-resolver", "api_url": "https://rseng.github.io/software/api/repos/github/ebi-jdispatcher/taxonomy-resolver"}, {"uid": "github/lbcb-sci/graphmap2", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/graphmap2", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/graphmap2"}, {"uid": "github/lbcb-sci/racon", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/racon", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/racon"}, {"uid": "github/lbcb-sci/raven", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/raven", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/raven"}, {"uid": "github/soerendip/ms-mint", "html_url": "https://rseng.github.io/software/repository/github/soerendip/ms-mint", "api_url": "https://rseng.github.io/software/api/repos/github/soerendip/ms-mint"}, {"uid": "github/scikit-hep/vector", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/vector", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/vector"}, {"uid": "github/scikit-hep/pyhf", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/pyhf", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/pyhf"}, {"uid": "github/scikit-hep/iminuit", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/iminuit", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/iminuit"}, {"uid": "github/AlexandrosAntoniadis/ODUSSEAS", "html_url": "https://rseng.github.io/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", "api_url": "https://rseng.github.io/software/api/repos/github/AlexandrosAntoniadis/ODUSSEAS"}, {"uid": "github/SDXorg/pysd", "html_url": "https://rseng.github.io/software/repository/github/SDXorg/pysd", "api_url": "https://rseng.github.io/software/api/repos/github/SDXorg/pysd"}, {"uid": "github/whybsml/whybsml", "html_url": "https://rseng.github.io/software/repository/github/whybsml/whybsml", "api_url": "https://rseng.github.io/software/api/repos/github/whybsml/whybsml"}, {"uid": "github/Dailer/RCausticMass", "html_url": "https://rseng.github.io/software/repository/github/Dailer/RCausticMass", "api_url": "https://rseng.github.io/software/api/repos/github/Dailer/RCausticMass"}, {"uid": "github/nickhand/pyRSD", "html_url": "https://rseng.github.io/software/repository/github/nickhand/pyRSD", "api_url": "https://rseng.github.io/software/api/repos/github/nickhand/pyRSD"}, {"uid": "github/luntergroup/octopus", "html_url": "https://rseng.github.io/software/repository/github/luntergroup/octopus", "api_url": "https://rseng.github.io/software/api/repos/github/luntergroup/octopus"}, {"uid": "github/SandoghdarLab/PiSCAT", "html_url": "https://rseng.github.io/software/repository/github/SandoghdarLab/PiSCAT", "api_url": "https://rseng.github.io/software/api/repos/github/SandoghdarLab/PiSCAT"}, {"uid": "github/Cadaei-Yuvxvs/OSHy-X", "html_url": "https://rseng.github.io/software/repository/github/Cadaei-Yuvxvs/OSHy-X", "api_url": "https://rseng.github.io/software/api/repos/github/Cadaei-Yuvxvs/OSHy-X"}, {"uid": "github/veragluscevic/dmdd", "html_url": "https://rseng.github.io/software/repository/github/veragluscevic/dmdd", "api_url": "https://rseng.github.io/software/api/repos/github/veragluscevic/dmdd"}, {"uid": "github/chakrah/sage", "html_url": "https://rseng.github.io/software/repository/github/chakrah/sage", "api_url": "https://rseng.github.io/software/api/repos/github/chakrah/sage"}, {"uid": "github/dfki-ric/movement_primitives", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric/movement_primitives", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric/movement_primitives"}, {"uid": "github/LTeinturier/Cloud-Killer-", "html_url": "https://rseng.github.io/software/repository/github/LTeinturier/Cloud-Killer-", "api_url": "https://rseng.github.io/software/api/repos/github/LTeinturier/Cloud-Killer-"}, {"uid": "github/DedalusProject/eigentools", "html_url": "https://rseng.github.io/software/repository/github/DedalusProject/eigentools", "api_url": "https://rseng.github.io/software/api/repos/github/DedalusProject/eigentools"}, {"uid": "github/JieZheng-ShanghaiTech/PiLSL", "html_url": "https://rseng.github.io/software/repository/github/JieZheng-ShanghaiTech/PiLSL", "api_url": "https://rseng.github.io/software/api/repos/github/JieZheng-ShanghaiTech/PiLSL"}, {"uid": "github/etempel/Bisous", "html_url": "https://rseng.github.io/software/repository/github/etempel/Bisous", "api_url": "https://rseng.github.io/software/api/repos/github/etempel/Bisous"}, {"uid": "github/jfarek/xatlas", "html_url": "https://rseng.github.io/software/repository/github/jfarek/xatlas", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/xatlas"}, {"uid": "github/jfarek/alignstats", "html_url": "https://rseng.github.io/software/repository/github/jfarek/alignstats", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/alignstats"}, {"uid": "github/Nico-Curti/rFBP", "html_url": "https://rseng.github.io/software/repository/github/Nico-Curti/rFBP", "api_url": "https://rseng.github.io/software/api/repos/github/Nico-Curti/rFBP"}, {"uid": "github/fastpm/fastpm", "html_url": "https://rseng.github.io/software/repository/github/fastpm/fastpm", "api_url": "https://rseng.github.io/software/api/repos/github/fastpm/fastpm"}, {"uid": "github/ericfell/rfbzero", "html_url": "https://rseng.github.io/software/repository/github/ericfell/rfbzero", "api_url": "https://rseng.github.io/software/api/repos/github/ericfell/rfbzero"}, {"uid": "github/klebgenomics/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/klebgenomics/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/klebgenomics/Kleborate"}, {"uid": "github/codidact/qpixel", "html_url": "https://rseng.github.io/software/repository/github/codidact/qpixel", "api_url": "https://rseng.github.io/software/api/repos/github/codidact/qpixel"}, {"uid": "github/andreaminio/haplosync", "html_url": "https://rseng.github.io/software/repository/github/andreaminio/haplosync", "api_url": "https://rseng.github.io/software/api/repos/github/andreaminio/haplosync"}, {"uid": "github/ihrke/pypillometry", "html_url": "https://rseng.github.io/software/repository/github/ihrke/pypillometry", "api_url": "https://rseng.github.io/software/api/repos/github/ihrke/pypillometry"}, {"uid": "github/valeriabonapersona/repair", "html_url": "https://rseng.github.io/software/repository/github/valeriabonapersona/repair", "api_url": "https://rseng.github.io/software/api/repos/github/valeriabonapersona/repair"}, {"uid": "github/rgerum/pylustrator", "html_url": "https://rseng.github.io/software/repository/github/rgerum/pylustrator", "api_url": "https://rseng.github.io/software/api/repos/github/rgerum/pylustrator"}, {"uid": "github/benmkent/SparseGridsKit.jl", "html_url": "https://rseng.github.io/software/repository/github/benmkent/SparseGridsKit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/benmkent/SparseGridsKit.jl"}, {"uid": "github/dingyaozhang/Evitar", "html_url": "https://rseng.github.io/software/repository/github/dingyaozhang/Evitar", "api_url": "https://rseng.github.io/software/api/repos/github/dingyaozhang/Evitar"}, {"uid": "github/ryneches/SuchTree", "html_url": "https://rseng.github.io/software/repository/github/ryneches/SuchTree", "api_url": "https://rseng.github.io/software/api/repos/github/ryneches/SuchTree"}, {"uid": "github/ekerrison/RadioSED", "html_url": "https://rseng.github.io/software/repository/github/ekerrison/RadioSED", "api_url": "https://rseng.github.io/software/api/repos/github/ekerrison/RadioSED"}, {"uid": "github/prashjet/popkinmocks", "html_url": "https://rseng.github.io/software/repository/github/prashjet/popkinmocks", "api_url": "https://rseng.github.io/software/api/repos/github/prashjet/popkinmocks"}, {"uid": "github/NVlabs/scene_synthesizer", "html_url": "https://rseng.github.io/software/repository/github/NVlabs/scene_synthesizer", "api_url": "https://rseng.github.io/software/api/repos/github/NVlabs/scene_synthesizer"}, {"uid": "github/geza-kovacs/tran_k2", "html_url": "https://rseng.github.io/software/repository/github/geza-kovacs/tran_k2", "api_url": "https://rseng.github.io/software/api/repos/github/geza-kovacs/tran_k2"}, {"uid": "github/mikecokina/elisa", "html_url": "https://rseng.github.io/software/repository/github/mikecokina/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/mikecokina/elisa"}, {"uid": "github/3D-e-Chem/knime-molviewer", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-molviewer", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-molviewer"}, {"uid": "github/3D-e-Chem/knime-klifs", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-klifs", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-klifs"}, {"uid": "github/3D-e-Chem/knime-silicos-it", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-silicos-it", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-silicos-it"}, {"uid": "github/3D-e-Chem/kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/kripodb"}, {"uid": "github/3D-e-Chem/knime-sstea", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sstea", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sstea"}, {"uid": "github/3D-e-Chem/knime-pharmacophore", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-pharmacophore", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-pharmacophore"}, {"uid": "github/3D-e-Chem/3D-e-Chem-VM", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/3D-e-Chem-VM", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/3D-e-Chem-VM"}, {"uid": "github/3D-e-Chem/sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/sygma"}, {"uid": "github/3D-e-Chem/knime-gpcrdb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-gpcrdb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-gpcrdb"}, {"uid": "github/3D-e-Chem/knime-sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sygma"}, {"uid": "github/3D-e-Chem/knime-kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-kripodb"}, {"uid": "github/3D-e-Chem/knime-python-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-node-archetype"}, {"uid": "github/3D-e-Chem/tycho-knime-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/tycho-knime-node-archetype"}, {"uid": "github/3D-e-Chem/knime-python-wrapper", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-wrapper"}, {"uid": "github/3D-e-Chem/knime-plants", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-plants", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-plants"}, {"uid": "github/3D-e-Chem/knime-testflow", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-testflow", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-testflow"}, {"uid": "github/PeterKamphuis/pyFAT-astro", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/pyFAT-astro", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/pyFAT-astro"}, {"uid": "github/PeterKamphuis/FAT", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/FAT", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/FAT"}, {"uid": "github/matvii/ADAM", "html_url": "https://rseng.github.io/software/repository/github/matvii/ADAM", "api_url": "https://rseng.github.io/software/api/repos/github/matvii/ADAM"}, {"uid": "github/kostergroup/SIMsalabim", "html_url": "https://rseng.github.io/software/repository/github/kostergroup/SIMsalabim", "api_url": "https://rseng.github.io/software/api/repos/github/kostergroup/SIMsalabim"}, {"uid": "github/open-and-sustainable/prismaid", "html_url": "https://rseng.github.io/software/repository/github/open-and-sustainable/prismaid", "api_url": "https://rseng.github.io/software/api/repos/github/open-and-sustainable/prismaid"}, {"uid": "github/nksaunders/giants", "html_url": "https://rseng.github.io/software/repository/github/nksaunders/giants", "api_url": "https://rseng.github.io/software/api/repos/github/nksaunders/giants"}, {"uid": "github/davidpagnon/Sports2D", "html_url": "https://rseng.github.io/software/repository/github/davidpagnon/Sports2D", "api_url": "https://rseng.github.io/software/api/repos/github/davidpagnon/Sports2D"}, {"uid": "github/icrar/daliuge", "html_url": "https://rseng.github.io/software/repository/github/icrar/daliuge", "api_url": "https://rseng.github.io/software/api/repos/github/icrar/daliuge"}, {"uid": "github/juanaldayparejo/archnemesis-dist", "html_url": "https://rseng.github.io/software/repository/github/juanaldayparejo/archnemesis-dist", "api_url": "https://rseng.github.io/software/api/repos/github/juanaldayparejo/archnemesis-dist"}, {"uid": "github/WentaoZhan1998/geospaNN", "html_url": "https://rseng.github.io/software/repository/github/WentaoZhan1998/geospaNN", "api_url": "https://rseng.github.io/software/api/repos/github/WentaoZhan1998/geospaNN"}, {"uid": "github/njcuk9999/apero-drs", "html_url": "https://rseng.github.io/software/repository/github/njcuk9999/apero-drs", "api_url": "https://rseng.github.io/software/api/repos/github/njcuk9999/apero-drs"}, {"uid": "github/karllark/DIRTY_dustrt", "html_url": "https://rseng.github.io/software/repository/github/karllark/DIRTY_dustrt", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/DIRTY_dustrt"}, {"uid": "github/karllark/dust_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/dust_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/dust_extinction"}, {"uid": "github/karllark/measure_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/measure_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/measure_extinction"}, {"uid": "github/hamidnpc/Neloura", "html_url": "https://rseng.github.io/software/repository/github/hamidnpc/Neloura", "api_url": "https://rseng.github.io/software/api/repos/github/hamidnpc/Neloura"}, {"uid": "github/mpiersonsmela/SeqVerify", "html_url": "https://rseng.github.io/software/repository/github/mpiersonsmela/SeqVerify", "api_url": "https://rseng.github.io/software/api/repos/github/mpiersonsmela/SeqVerify"}, {"uid": "github/kmsurrao/reMASTERed", "html_url": "https://rseng.github.io/software/repository/github/kmsurrao/reMASTERed", "api_url": "https://rseng.github.io/software/api/repos/github/kmsurrao/reMASTERed"}, {"uid": "github/pelican/pelican", "html_url": "https://rseng.github.io/software/repository/github/pelican/pelican", "api_url": "https://rseng.github.io/software/api/repos/github/pelican/pelican"}, {"uid": "github/KeckObservatory/tilsotua", "html_url": "https://rseng.github.io/software/repository/github/KeckObservatory/tilsotua", "api_url": "https://rseng.github.io/software/api/repos/github/KeckObservatory/tilsotua"}, {"uid": "github/csj607/STaRS", "html_url": "https://rseng.github.io/software/repository/github/csj607/STaRS", "api_url": "https://rseng.github.io/software/api/repos/github/csj607/STaRS"}, {"uid": "github/xszhu-lab/AGImpute", "html_url": "https://rseng.github.io/software/repository/github/xszhu-lab/AGImpute", "api_url": "https://rseng.github.io/software/api/repos/github/xszhu-lab/AGImpute"}, {"uid": "github/travisseymour/EPICpy", "html_url": "https://rseng.github.io/software/repository/github/travisseymour/EPICpy", "api_url": "https://rseng.github.io/software/api/repos/github/travisseymour/EPICpy"}, {"uid": "github/lbr-stack/lbr_stack_doc", "html_url": "https://rseng.github.io/software/repository/github/lbr-stack/lbr_stack_doc", "api_url": "https://rseng.github.io/software/api/repos/github/lbr-stack/lbr_stack_doc"}, {"uid": "github/MESAHub/mesa", "html_url": "https://rseng.github.io/software/repository/github/MESAHub/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/MESAHub/mesa"}, {"uid": "github/chrisaberson/BetterReg", "html_url": "https://rseng.github.io/software/repository/github/chrisaberson/BetterReg", "api_url": "https://rseng.github.io/software/api/repos/github/chrisaberson/BetterReg"}, {"uid": "github/Rostlab/ConSurf", "html_url": "https://rseng.github.io/software/repository/github/Rostlab/ConSurf", "api_url": "https://rseng.github.io/software/api/repos/github/Rostlab/ConSurf"}, {"uid": "github/ghislainv/forestatrisk", "html_url": "https://rseng.github.io/software/repository/github/ghislainv/forestatrisk", "api_url": "https://rseng.github.io/software/api/repos/github/ghislainv/forestatrisk"}, {"uid": "github/aboucaud/pypher", "html_url": "https://rseng.github.io/software/repository/github/aboucaud/pypher", "api_url": "https://rseng.github.io/software/api/repos/github/aboucaud/pypher"}, {"uid": "github/radwinskis/RadGEEToolbox", "html_url": "https://rseng.github.io/software/repository/github/radwinskis/RadGEEToolbox", "api_url": "https://rseng.github.io/software/api/repos/github/radwinskis/RadGEEToolbox"}, {"uid": "github/CRG-CNAG/anubis", "html_url": "https://rseng.github.io/software/repository/github/CRG-CNAG/anubis", "api_url": "https://rseng.github.io/software/api/repos/github/CRG-CNAG/anubis"}, {"uid": "github/lxvm/AutoBZ.jl", "html_url": "https://rseng.github.io/software/repository/github/lxvm/AutoBZ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lxvm/AutoBZ.jl"}, {"uid": "github/milnus/Corekaburra", "html_url": "https://rseng.github.io/software/repository/github/milnus/Corekaburra", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Corekaburra"}, {"uid": "github/milnus/Magphi", "html_url": "https://rseng.github.io/software/repository/github/milnus/Magphi", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Magphi"}, {"uid": "github/nifty-ppl/nifty", "html_url": "https://rseng.github.io/software/repository/github/nifty-ppl/nifty", "api_url": "https://rseng.github.io/software/api/repos/github/nifty-ppl/nifty"}, {"uid": "github/vdemichev/DiaNN", "html_url": "https://rseng.github.io/software/repository/github/vdemichev/DiaNN", "api_url": "https://rseng.github.io/software/api/repos/github/vdemichev/DiaNN"}, {"uid": "github/mrline/CHIMERA", "html_url": "https://rseng.github.io/software/repository/github/mrline/CHIMERA", "api_url": "https://rseng.github.io/software/api/repos/github/mrline/CHIMERA"}, {"uid": "github/SWE-UniStuttgart/Qlunc", "html_url": "https://rseng.github.io/software/repository/github/SWE-UniStuttgart/Qlunc", "api_url": "https://rseng.github.io/software/api/repos/github/SWE-UniStuttgart/Qlunc"}, {"uid": "github/evanoconnor/GR1D", "html_url": "https://rseng.github.io/software/repository/github/evanoconnor/GR1D", "api_url": "https://rseng.github.io/software/api/repos/github/evanoconnor/GR1D"}, {"uid": "github/VU-IVM/VineCopulas", "html_url": "https://rseng.github.io/software/repository/github/VU-IVM/VineCopulas", "api_url": "https://rseng.github.io/software/api/repos/github/VU-IVM/VineCopulas"}, {"uid": "github/yapenzhang/excalibuhr", "html_url": "https://rseng.github.io/software/repository/github/yapenzhang/excalibuhr", "api_url": "https://rseng.github.io/software/api/repos/github/yapenzhang/excalibuhr"}, {"uid": "github/benlansdell/ethome", "html_url": "https://rseng.github.io/software/repository/github/benlansdell/ethome", "api_url": "https://rseng.github.io/software/api/repos/github/benlansdell/ethome"}, {"uid": "github/insightsengineering/rbmi", "html_url": "https://rseng.github.io/software/repository/github/insightsengineering/rbmi", "api_url": "https://rseng.github.io/software/api/repos/github/insightsengineering/rbmi"}, {"uid": "github/mjuvela/ISM", "html_url": "https://rseng.github.io/software/repository/github/mjuvela/ISM", "api_url": "https://rseng.github.io/software/api/repos/github/mjuvela/ISM"}, {"uid": "github/sebhaan/geobo", "html_url": "https://rseng.github.io/software/repository/github/sebhaan/geobo", "api_url": "https://rseng.github.io/software/api/repos/github/sebhaan/geobo"}, {"uid": "github/flekschas/regl-scatterplot", "html_url": "https://rseng.github.io/software/repository/github/flekschas/regl-scatterplot", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/regl-scatterplot"}, {"uid": "github/flekschas/jupyter-scatter", "html_url": "https://rseng.github.io/software/repository/github/flekschas/jupyter-scatter", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/jupyter-scatter"}, {"uid": "github/danielreardon/scintools", "html_url": "https://rseng.github.io/software/repository/github/danielreardon/scintools", "api_url": "https://rseng.github.io/software/api/repos/github/danielreardon/scintools"}, {"uid": "github/rferdman/afr", "html_url": "https://rseng.github.io/software/repository/github/rferdman/afr", "api_url": "https://rseng.github.io/software/api/repos/github/rferdman/afr"}, {"uid": "github/PBjam-projects/PBjam", "html_url": "https://rseng.github.io/software/repository/github/PBjam-projects/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/PBjam-projects/PBjam"}, {"uid": "github/Higgins00/TESS-Localize", "html_url": "https://rseng.github.io/software/repository/github/Higgins00/TESS-Localize", "api_url": "https://rseng.github.io/software/api/repos/github/Higgins00/TESS-Localize"}, {"uid": "github/chanzuckerberg/idseq-dag", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/idseq-dag", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/idseq-dag"}, {"uid": "github/chanzuckerberg/cellxgene", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/cellxgene", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/cellxgene"}, {"uid": "github/chanzuckerberg/shasta", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/shasta", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/shasta"}, {"uid": "github/GWang2022/iGDP", "html_url": "https://rseng.github.io/software/repository/github/GWang2022/iGDP", "api_url": "https://rseng.github.io/software/api/repos/github/GWang2022/iGDP"}, {"uid": "github/Martinsos/edlib", "html_url": "https://rseng.github.io/software/repository/github/Martinsos/edlib", "api_url": "https://rseng.github.io/software/api/repos/github/Martinsos/edlib"}, {"uid": "github/carronj/plancklens", "html_url": "https://rseng.github.io/software/repository/github/carronj/plancklens", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/plancklens"}, {"uid": "github/carronj/LensIt", "html_url": "https://rseng.github.io/software/repository/github/carronj/LensIt", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/LensIt"}, {"uid": "github/carronj/lenspyx", "html_url": "https://rseng.github.io/software/repository/github/carronj/lenspyx", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/lenspyx"}, {"uid": "github/icredd-cheminfo/CGRdb2", "html_url": "https://rseng.github.io/software/repository/github/icredd-cheminfo/CGRdb2", "api_url": "https://rseng.github.io/software/api/repos/github/icredd-cheminfo/CGRdb2"}, {"uid": "github/introlab/opentera", "html_url": "https://rseng.github.io/software/repository/github/introlab/opentera", "api_url": "https://rseng.github.io/software/api/repos/github/introlab/opentera"}, {"uid": "github/cdfortenbach/JET", "html_url": "https://rseng.github.io/software/repository/github/cdfortenbach/JET", "api_url": "https://rseng.github.io/software/api/repos/github/cdfortenbach/JET"}, {"uid": "github/Mulan-94/smops", "html_url": "https://rseng.github.io/software/repository/github/Mulan-94/smops", "api_url": "https://rseng.github.io/software/api/repos/github/Mulan-94/smops"}, {"uid": "github/efpl-columbia/PointClouds.jl", "html_url": "https://rseng.github.io/software/repository/github/efpl-columbia/PointClouds.jl", "api_url": "https://rseng.github.io/software/api/repos/github/efpl-columbia/PointClouds.jl"}, {"uid": "github/paulmorio/gincco", "html_url": "https://rseng.github.io/software/repository/github/paulmorio/gincco", "api_url": "https://rseng.github.io/software/api/repos/github/paulmorio/gincco"}, {"uid": "github/jls713/tact", "html_url": "https://rseng.github.io/software/repository/github/jls713/tact", "api_url": "https://rseng.github.io/software/api/repos/github/jls713/tact"}, {"uid": "github/dgrun/FateID", "html_url": "https://rseng.github.io/software/repository/github/dgrun/FateID", "api_url": "https://rseng.github.io/software/api/repos/github/dgrun/FateID"}, {"uid": "github/mphowardlab/lammpsio", "html_url": "https://rseng.github.io/software/repository/github/mphowardlab/lammpsio", "api_url": "https://rseng.github.io/software/api/repos/github/mphowardlab/lammpsio"}, {"uid": "github/muzafferarikan/gNOMO2", "html_url": "https://rseng.github.io/software/repository/github/muzafferarikan/gNOMO2", "api_url": "https://rseng.github.io/software/api/repos/github/muzafferarikan/gNOMO2"}, {"uid": "github/csuhjhjhj/GCNCMI", "html_url": "https://rseng.github.io/software/repository/github/csuhjhjhj/GCNCMI", "api_url": "https://rseng.github.io/software/api/repos/github/csuhjhjhj/GCNCMI"}, {"uid": "github/cedrus-opensource/pyxid", "html_url": "https://rseng.github.io/software/repository/github/cedrus-opensource/pyxid", "api_url": "https://rseng.github.io/software/api/repos/github/cedrus-opensource/pyxid"}, {"uid": "github/varchasgopalaswamy/AutoUncertainties", "html_url": "https://rseng.github.io/software/repository/github/varchasgopalaswamy/AutoUncertainties", "api_url": "https://rseng.github.io/software/api/repos/github/varchasgopalaswamy/AutoUncertainties"}, {"uid": "github/tonhingm/PHOTOe-v1", "html_url": "https://rseng.github.io/software/repository/github/tonhingm/PHOTOe-v1", "api_url": "https://rseng.github.io/software/api/repos/github/tonhingm/PHOTOe-v1"}, {"uid": "github/revoltek/losoto", "html_url": "https://rseng.github.io/software/repository/github/revoltek/losoto", "api_url": "https://rseng.github.io/software/api/repos/github/revoltek/losoto"}, {"uid": "github/mrteetoe/HOI", "html_url": "https://rseng.github.io/software/repository/github/mrteetoe/HOI", "api_url": "https://rseng.github.io/software/api/repos/github/mrteetoe/HOI"}, {"uid": "github/gourabghoshroy/MPVNN", "html_url": "https://rseng.github.io/software/repository/github/gourabghoshroy/MPVNN", "api_url": "https://rseng.github.io/software/api/repos/github/gourabghoshroy/MPVNN"}, {"uid": "github/rroyaute/h2_breeders_equation", "html_url": "https://rseng.github.io/software/repository/github/rroyaute/h2_breeders_equation", "api_url": "https://rseng.github.io/software/api/repos/github/rroyaute/h2_breeders_equation"}, {"uid": "github/franciscovillaescusa/Pylians3", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians3", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians3"}, {"uid": "github/franciscovillaescusa/Pylians", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians"}, {"uid": "github/gxiaolab/scAllele", "html_url": "https://rseng.github.io/software/repository/github/gxiaolab/scAllele", "api_url": "https://rseng.github.io/software/api/repos/github/gxiaolab/scAllele"}, {"uid": "github/moritzobenauer/ProjectRaccoon", "html_url": "https://rseng.github.io/software/repository/github/moritzobenauer/ProjectRaccoon", "api_url": "https://rseng.github.io/software/api/repos/github/moritzobenauer/ProjectRaccoon"}, {"uid": "github/seamplex/feenox", "html_url": "https://rseng.github.io/software/repository/github/seamplex/feenox", "api_url": "https://rseng.github.io/software/api/repos/github/seamplex/feenox"}, {"uid": "github/solislemuslab/minaa", "html_url": "https://rseng.github.io/software/repository/github/solislemuslab/minaa", "api_url": "https://rseng.github.io/software/api/repos/github/solislemuslab/minaa"}, {"uid": "github/openmsr/CAD_to_OpenMC", "html_url": "https://rseng.github.io/software/repository/github/openmsr/CAD_to_OpenMC", "api_url": "https://rseng.github.io/software/api/repos/github/openmsr/CAD_to_OpenMC"}, {"uid": "github/hopr-framework/PyHOPE", "html_url": "https://rseng.github.io/software/repository/github/hopr-framework/PyHOPE", "api_url": "https://rseng.github.io/software/api/repos/github/hopr-framework/PyHOPE"}, {"uid": "github/lysovosyl/NanoDeep", "html_url": "https://rseng.github.io/software/repository/github/lysovosyl/NanoDeep", "api_url": "https://rseng.github.io/software/api/repos/github/lysovosyl/NanoDeep"}, {"uid": "github/arnikz/PIQMIe", "html_url": "https://rseng.github.io/software/repository/github/arnikz/PIQMIe", "api_url": "https://rseng.github.io/software/api/repos/github/arnikz/PIQMIe"}, {"uid": "github/viash-io/viash", "html_url": "https://rseng.github.io/software/repository/github/viash-io/viash", "api_url": "https://rseng.github.io/software/api/repos/github/viash-io/viash"}, {"uid": "github/olivares-j/Kalkayotl", "html_url": "https://rseng.github.io/software/repository/github/olivares-j/Kalkayotl", "api_url": "https://rseng.github.io/software/api/repos/github/olivares-j/Kalkayotl"}, {"uid": "github/fulcrumgenomics/fgbio", "html_url": "https://rseng.github.io/software/repository/github/fulcrumgenomics/fgbio", "api_url": "https://rseng.github.io/software/api/repos/github/fulcrumgenomics/fgbio"}, {"uid": "github/openjournals/joss", "html_url": "https://rseng.github.io/software/repository/github/openjournals/joss", "api_url": "https://rseng.github.io/software/api/repos/github/openjournals/joss"}, {"uid": "github/astroferreira/galclean", "html_url": "https://rseng.github.io/software/repository/github/astroferreira/galclean", "api_url": "https://rseng.github.io/software/api/repos/github/astroferreira/galclean"}, {"uid": "github/reality/klarigi", "html_url": "https://rseng.github.io/software/repository/github/reality/klarigi", "api_url": "https://rseng.github.io/software/api/repos/github/reality/klarigi"}, {"uid": "github/mp3guy/ElasticFusion", "html_url": "https://rseng.github.io/software/repository/github/mp3guy/ElasticFusion", "api_url": "https://rseng.github.io/software/api/repos/github/mp3guy/ElasticFusion"}, {"uid": "github/brettc/partitionfinder", "html_url": "https://rseng.github.io/software/repository/github/brettc/partitionfinder", "api_url": "https://rseng.github.io/software/api/repos/github/brettc/partitionfinder"}, {"uid": "github/NielsenBerkeleyLab/sconce", "html_url": "https://rseng.github.io/software/repository/github/NielsenBerkeleyLab/sconce", "api_url": "https://rseng.github.io/software/api/repos/github/NielsenBerkeleyLab/sconce"}, {"uid": "github/NoahSailer/FishLSS", "html_url": "https://rseng.github.io/software/repository/github/NoahSailer/FishLSS", "api_url": "https://rseng.github.io/software/api/repos/github/NoahSailer/FishLSS"}, {"uid": "github/bfarr/kombine", "html_url": "https://rseng.github.io/software/repository/github/bfarr/kombine", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/kombine"}, {"uid": "github/bfarr/exocartographer", "html_url": "https://rseng.github.io/software/repository/github/bfarr/exocartographer", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/exocartographer"}, {"uid": "github/gridap/GridapSolvers.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/GridapSolvers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/GridapSolvers.jl"}, {"uid": "github/gridap/Gridap.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/Gridap.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/Gridap.jl"}, {"uid": "github/tbronzwaer/raptor", "html_url": "https://rseng.github.io/software/repository/github/tbronzwaer/raptor", "api_url": "https://rseng.github.io/software/api/repos/github/tbronzwaer/raptor"}, {"uid": "github/CosmoLike/CosmoCov", "html_url": "https://rseng.github.io/software/repository/github/CosmoLike/CosmoCov", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoLike/CosmoCov"}, {"uid": "github/tortellini-tools/action", "html_url": "https://rseng.github.io/software/repository/github/tortellini-tools/action", "api_url": "https://rseng.github.io/software/api/repos/github/tortellini-tools/action"}, {"uid": "github/OPM/opm-simulators", "html_url": "https://rseng.github.io/software/repository/github/OPM/opm-simulators", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/opm-simulators"}, {"uid": "github/OPM/pyopmspe11", "html_url": "https://rseng.github.io/software/repository/github/OPM/pyopmspe11", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/pyopmspe11"}, {"uid": "github/statOmics/tradeSeqPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/tradeSeqPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/tradeSeqPaper"}, {"uid": "github/statOmics/satuRnPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/satuRnPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/satuRnPaper"}, {"uid": "github/mmann1123/xr_fresh", "html_url": "https://rseng.github.io/software/repository/github/mmann1123/xr_fresh", "api_url": "https://rseng.github.io/software/api/repos/github/mmann1123/xr_fresh"}, {"uid": "github/epigenelabs/inmoose", "html_url": "https://rseng.github.io/software/repository/github/epigenelabs/inmoose", "api_url": "https://rseng.github.io/software/api/repos/github/epigenelabs/inmoose"}, {"uid": "github/SimCab-CHU/ifCNVR", "html_url": "https://rseng.github.io/software/repository/github/SimCab-CHU/ifCNVR", "api_url": "https://rseng.github.io/software/api/repos/github/SimCab-CHU/ifCNVR"}, {"uid": "github/ggonnella/gfapy", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/gfapy", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/gfapy"}, {"uid": "github/ggonnella/fastsubtrees", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/fastsubtrees", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/fastsubtrees"}, {"uid": "github/ggonnella/rgfa", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/rgfa", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/rgfa"}, {"uid": "github/sapearson/HSS", "html_url": "https://rseng.github.io/software/repository/github/sapearson/HSS", "api_url": "https://rseng.github.io/software/api/repos/github/sapearson/HSS"}, {"uid": "github/hposborn/MonoTools", "html_url": "https://rseng.github.io/software/repository/github/hposborn/MonoTools", "api_url": "https://rseng.github.io/software/api/repos/github/hposborn/MonoTools"}, {"uid": "github/Baohua-Chen/GFFx", "html_url": "https://rseng.github.io/software/repository/github/Baohua-Chen/GFFx", "api_url": "https://rseng.github.io/software/api/repos/github/Baohua-Chen/GFFx"}, {"uid": "github/lh3/bfc", "html_url": "https://rseng.github.io/software/repository/github/lh3/bfc", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bfc"}, {"uid": "github/lh3/bgt", "html_url": "https://rseng.github.io/software/repository/github/lh3/bgt", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bgt"}, {"uid": "github/lh3/wgsim", "html_url": "https://rseng.github.io/software/repository/github/lh3/wgsim", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/wgsim"}, {"uid": "github/lh3/fermi-lite", "html_url": "https://rseng.github.io/software/repository/github/lh3/fermi-lite", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/fermi-lite"}, {"uid": "github/lh3/bedtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bedtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bedtk"}, {"uid": "github/lh3/miniasm", "html_url": "https://rseng.github.io/software/repository/github/lh3/miniasm", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/miniasm"}, {"uid": "github/lh3/minimap2", "html_url": "https://rseng.github.io/software/repository/github/lh3/minimap2", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/minimap2"}, {"uid": "github/lh3/bioawk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bioawk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bioawk"}, {"uid": "github/lh3/seqtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/seqtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/seqtk"}, {"uid": "github/SwissClinicalTrialOrganisation/secuTrialR", "html_url": "https://rseng.github.io/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", "api_url": "https://rseng.github.io/software/api/repos/github/SwissClinicalTrialOrganisation/secuTrialR"}, {"uid": "github/csdms/bmi", "html_url": "https://rseng.github.io/software/repository/github/csdms/bmi", "api_url": "https://rseng.github.io/software/api/repos/github/csdms/bmi"}, {"uid": "github/DeepRank/iScore", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/iScore", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/iScore"}, {"uid": "github/DeepRank/pssmgen", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pssmgen", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pssmgen"}, {"uid": "github/DeepRank/pdb2sql", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pdb2sql", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pdb2sql"}, {"uid": "github/DeepRank/deeprank-core", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank-core", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank-core"}, {"uid": "github/DeepRank/DeepRank-GNN", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/DeepRank-GNN", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/DeepRank-GNN"}, {"uid": "github/DeepRank/deeprank", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank"}, {"uid": "github/vmplacco/linemake", "html_url": "https://rseng.github.io/software/repository/github/vmplacco/linemake", "api_url": "https://rseng.github.io/software/api/repos/github/vmplacco/linemake"}, {"uid": "github/yupidevs/pactus", "html_url": "https://rseng.github.io/software/repository/github/yupidevs/pactus", "api_url": "https://rseng.github.io/software/api/repos/github/yupidevs/pactus"}, {"uid": "github/GRTLCollaboration/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRFolres"}, {"uid": "github/GRTLCollaboration/GRTresna", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRTresna", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRTresna"}, {"uid": "github/GRTLCollaboration/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRChombo"}, {"uid": "github/GRTLCollaboration/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRDzhadzha"}, {"uid": "github/watts-dev/watts", "html_url": "https://rseng.github.io/software/repository/github/watts-dev/watts", "api_url": "https://rseng.github.io/software/api/repos/github/watts-dev/watts"}, {"uid": "github/natelust/least_asymmetry", "html_url": "https://rseng.github.io/software/repository/github/natelust/least_asymmetry", "api_url": "https://rseng.github.io/software/api/repos/github/natelust/least_asymmetry"}, {"uid": "github/petigura/terra", "html_url": "https://rseng.github.io/software/repository/github/petigura/terra", "api_url": "https://rseng.github.io/software/api/repos/github/petigura/terra"}, {"uid": "github/newcleo-dev-team/lbh15", "html_url": "https://rseng.github.io/software/repository/github/newcleo-dev-team/lbh15", "api_url": "https://rseng.github.io/software/api/repos/github/newcleo-dev-team/lbh15"}, {"uid": "github/rqtl/qtl2", "html_url": "https://rseng.github.io/software/repository/github/rqtl/qtl2", "api_url": "https://rseng.github.io/software/api/repos/github/rqtl/qtl2"}, {"uid": "github/paulhjkelly/taskgraph-metaprogramming", "html_url": "https://rseng.github.io/software/repository/github/paulhjkelly/taskgraph-metaprogramming", "api_url": "https://rseng.github.io/software/api/repos/github/paulhjkelly/taskgraph-metaprogramming"}, {"uid": "github/neurogeriatricskiel/NGMT", "html_url": "https://rseng.github.io/software/repository/github/neurogeriatricskiel/NGMT", "api_url": "https://rseng.github.io/software/api/repos/github/neurogeriatricskiel/NGMT"}, {"uid": "github/russelllab/wesa", "html_url": "https://rseng.github.io/software/repository/github/russelllab/wesa", "api_url": "https://rseng.github.io/software/api/repos/github/russelllab/wesa"}, {"uid": "github/nilearn/nilearnhub.io", "html_url": "https://rseng.github.io/software/repository/github/nilearn/nilearnhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/nilearn/nilearnhub.io"}, {"uid": "github/miracum/ahd2fhir", "html_url": "https://rseng.github.io/software/repository/github/miracum/ahd2fhir", "api_url": "https://rseng.github.io/software/api/repos/github/miracum/ahd2fhir"}, {"uid": "github/ppmim/PAPI4K", "html_url": "https://rseng.github.io/software/repository/github/ppmim/PAPI4K", "api_url": "https://rseng.github.io/software/api/repos/github/ppmim/PAPI4K"}, {"uid": "github/drcandacemakedamoore/cleanX", "html_url": "https://rseng.github.io/software/repository/github/drcandacemakedamoore/cleanX", "api_url": "https://rseng.github.io/software/api/repos/github/drcandacemakedamoore/cleanX"}, {"uid": "github/rhysf/HaplotypeTools", "html_url": "https://rseng.github.io/software/repository/github/rhysf/HaplotypeTools", "api_url": "https://rseng.github.io/software/api/repos/github/rhysf/HaplotypeTools"}, {"uid": "github/jhparkastro/gpcal", "html_url": "https://rseng.github.io/software/repository/github/jhparkastro/gpcal", "api_url": "https://rseng.github.io/software/api/repos/github/jhparkastro/gpcal"}, {"uid": "github/mwaskom/seaborn", "html_url": "https://rseng.github.io/software/repository/github/mwaskom/seaborn", "api_url": "https://rseng.github.io/software/api/repos/github/mwaskom/seaborn"}, {"uid": "github/V-Bernal/GeneNetTools", "html_url": "https://rseng.github.io/software/repository/github/V-Bernal/GeneNetTools", "api_url": "https://rseng.github.io/software/api/repos/github/V-Bernal/GeneNetTools"}, {"uid": "github/BioGearsEngine/core", "html_url": "https://rseng.github.io/software/repository/github/BioGearsEngine/core", "api_url": "https://rseng.github.io/software/api/repos/github/BioGearsEngine/core"}, {"uid": "github/tomasstolker/pycrires", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/pycrires", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/pycrires"}, {"uid": "github/tomasstolker/ARTES", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/ARTES", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/ARTES"}, {"uid": "github/tomasstolker/species", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/species", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/species"}, {"uid": "github/rrwick/Filtlong", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Filtlong", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Filtlong"}, {"uid": "github/rrwick/Unicycler", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Unicycler", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Unicycler"}, {"uid": "github/rrwick/Deepbinner", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Deepbinner", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Deepbinner"}, {"uid": "github/rrwick/Porechop", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Porechop", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Porechop"}, {"uid": "github/rrwick/Bandage", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Bandage", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Bandage"}, {"uid": "github/simonprovost/scikit-longitudinal", "html_url": "https://rseng.github.io/software/repository/github/simonprovost/scikit-longitudinal", "api_url": "https://rseng.github.io/software/api/repos/github/simonprovost/scikit-longitudinal"}, {"uid": "github/astroboylrx/Rubble", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/Rubble", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/Rubble"}, {"uid": "github/astroboylrx/PLAN", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/PLAN", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/PLAN"}, {"uid": "github/atomec-project/atoMEC", "html_url": "https://rseng.github.io/software/repository/github/atomec-project/atoMEC", "api_url": "https://rseng.github.io/software/api/repos/github/atomec-project/atoMEC"}, {"uid": "github/QibangLiu/PDLSM-FEM_mpi", "html_url": "https://rseng.github.io/software/repository/github/QibangLiu/PDLSM-FEM_mpi", "api_url": "https://rseng.github.io/software/api/repos/github/QibangLiu/PDLSM-FEM_mpi"}, {"uid": "github/medvedevgroup/TwoPaCo", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/TwoPaCo", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/TwoPaCo"}, {"uid": "github/medvedevgroup/varmatch", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/varmatch", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/varmatch"}, {"uid": "github/simonehagey/orbdot", "html_url": "https://rseng.github.io/software/repository/github/simonehagey/orbdot", "api_url": "https://rseng.github.io/software/api/repos/github/simonehagey/orbdot"}, {"uid": "github/GammaCascade/GCascade", "html_url": "https://rseng.github.io/software/repository/github/GammaCascade/GCascade", "api_url": "https://rseng.github.io/software/api/repos/github/GammaCascade/GCascade"}, {"uid": "github/JuliaHelmecke/MetaboMAPS", "html_url": "https://rseng.github.io/software/repository/github/JuliaHelmecke/MetaboMAPS", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHelmecke/MetaboMAPS"}, {"uid": "github/ebellm/pyraf-dbsp", "html_url": "https://rseng.github.io/software/repository/github/ebellm/pyraf-dbsp", "api_url": "https://rseng.github.io/software/api/repos/github/ebellm/pyraf-dbsp"}, {"uid": "github/felixbur/nkululeko", "html_url": "https://rseng.github.io/software/repository/github/felixbur/nkululeko", "api_url": "https://rseng.github.io/software/api/repos/github/felixbur/nkululeko"}, {"uid": "github/Ambuj-UF/APOP", "html_url": "https://rseng.github.io/software/repository/github/Ambuj-UF/APOP", "api_url": "https://rseng.github.io/software/api/repos/github/Ambuj-UF/APOP"}, {"uid": "github/marcelauliano/MitoHiFi", "html_url": "https://rseng.github.io/software/repository/github/marcelauliano/MitoHiFi", "api_url": "https://rseng.github.io/software/api/repos/github/marcelauliano/MitoHiFi"}, {"uid": "github/gwastro/pycbc", "html_url": "https://rseng.github.io/software/repository/github/gwastro/pycbc", "api_url": "https://rseng.github.io/software/api/repos/github/gwastro/pycbc"}, {"uid": "github/ArgoCanada/argodata", "html_url": "https://rseng.github.io/software/repository/github/ArgoCanada/argodata", "api_url": "https://rseng.github.io/software/api/repos/github/ArgoCanada/argodata"}, {"uid": "github/sinanozaydin/pide", "html_url": "https://rseng.github.io/software/repository/github/sinanozaydin/pide", "api_url": "https://rseng.github.io/software/api/repos/github/sinanozaydin/pide"}, {"uid": "github/mpi4py/shmem4py", "html_url": "https://rseng.github.io/software/repository/github/mpi4py/shmem4py", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4py/shmem4py"}, {"uid": "github/InsightSoftwareConsortium/ITK", "html_url": "https://rseng.github.io/software/repository/github/InsightSoftwareConsortium/ITK", "api_url": "https://rseng.github.io/software/api/repos/github/InsightSoftwareConsortium/ITK"}, {"uid": "github/dolfin-adjoint/pyadjoint", "html_url": "https://rseng.github.io/software/repository/github/dolfin-adjoint/pyadjoint", "api_url": "https://rseng.github.io/software/api/repos/github/dolfin-adjoint/pyadjoint"}, {"uid": "github/ggciag/mandyoc", "html_url": "https://rseng.github.io/software/repository/github/ggciag/mandyoc", "api_url": "https://rseng.github.io/software/api/repos/github/ggciag/mandyoc"}, {"uid": "github/afeinstein20/stella", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/stella", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/stella"}, {"uid": "github/afeinstein20/eleanor", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/eleanor", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/eleanor"}, {"uid": "github/AutoResearch/sweetbean", "html_url": "https://rseng.github.io/software/repository/github/AutoResearch/sweetbean", "api_url": "https://rseng.github.io/software/api/repos/github/AutoResearch/sweetbean"}, {"uid": "github/cloudflex-project/cloudflex", "html_url": "https://rseng.github.io/software/repository/github/cloudflex-project/cloudflex", "api_url": "https://rseng.github.io/software/api/repos/github/cloudflex-project/cloudflex"}, {"uid": "github/daler/pybedtools", "html_url": "https://rseng.github.io/software/repository/github/daler/pybedtools", "api_url": "https://rseng.github.io/software/api/repos/github/daler/pybedtools"}, {"uid": "github/daler/gffutils", "html_url": "https://rseng.github.io/software/repository/github/daler/gffutils", "api_url": "https://rseng.github.io/software/api/repos/github/daler/gffutils"}, {"uid": "github/zheng-lh/UBER", "html_url": "https://rseng.github.io/software/repository/github/zheng-lh/UBER", "api_url": "https://rseng.github.io/software/api/repos/github/zheng-lh/UBER"}, {"uid": "github/twosixlabs/magicwand-datatool", "html_url": "https://rseng.github.io/software/repository/github/twosixlabs/magicwand-datatool", "api_url": "https://rseng.github.io/software/api/repos/github/twosixlabs/magicwand-datatool"}, {"uid": "github/justinmathias/isocalcR", "html_url": "https://rseng.github.io/software/repository/github/justinmathias/isocalcR", "api_url": "https://rseng.github.io/software/api/repos/github/justinmathias/isocalcR"}, {"uid": "github/asmusskar/ALVA", "html_url": "https://rseng.github.io/software/repository/github/asmusskar/ALVA", "api_url": "https://rseng.github.io/software/api/repos/github/asmusskar/ALVA"}, {"uid": "github/JonasRieger/ldaPrototype", "html_url": "https://rseng.github.io/software/repository/github/JonasRieger/ldaPrototype", "api_url": "https://rseng.github.io/software/api/repos/github/JonasRieger/ldaPrototype"}, {"uid": "github/Patrick-Cole/pygmi", "html_url": "https://rseng.github.io/software/repository/github/Patrick-Cole/pygmi", "api_url": "https://rseng.github.io/software/api/repos/github/Patrick-Cole/pygmi"}, {"uid": "github/supernnova/SuperNNova", "html_url": "https://rseng.github.io/software/repository/github/supernnova/SuperNNova", "api_url": "https://rseng.github.io/software/api/repos/github/supernnova/SuperNNova"}, {"uid": "github/pixixiaonaogou/MLSDR", "html_url": "https://rseng.github.io/software/repository/github/pixixiaonaogou/MLSDR", "api_url": "https://rseng.github.io/software/api/repos/github/pixixiaonaogou/MLSDR"}, {"uid": "github/abs2k12/COCOA", "html_url": "https://rseng.github.io/software/repository/github/abs2k12/COCOA", "api_url": "https://rseng.github.io/software/api/repos/github/abs2k12/COCOA"}, {"uid": "github/nitadori/SCF-FDPS", "html_url": "https://rseng.github.io/software/repository/github/nitadori/SCF-FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/nitadori/SCF-FDPS"}, {"uid": "github/tomoyukif/MCPtaggR", "html_url": "https://rseng.github.io/software/repository/github/tomoyukif/MCPtaggR", "api_url": "https://rseng.github.io/software/api/repos/github/tomoyukif/MCPtaggR"}, {"uid": "github/AA-ALERT/frbcatdb", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcatdb", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcatdb"}, {"uid": "github/AA-ALERT/AMBER", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AMBER"}, {"uid": "github/AA-ALERT/Dedispersion", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/Dedispersion", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/Dedispersion"}, {"uid": "github/AA-ALERT/AstroData", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AstroData", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AstroData"}, {"uid": "github/AA-ALERT/frbcat-web", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcat-web", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcat-web"}, {"uid": "github/rossfadely/star-galaxy-classification", "html_url": "https://rseng.github.io/software/repository/github/rossfadely/star-galaxy-classification", "api_url": "https://rseng.github.io/software/api/repos/github/rossfadely/star-galaxy-classification"}, {"uid": "github/BitSeq/BitSeq", "html_url": "https://rseng.github.io/software/repository/github/BitSeq/BitSeq", "api_url": "https://rseng.github.io/software/api/repos/github/BitSeq/BitSeq"}, {"uid": "github/domenico-simone/rmlst_api", "html_url": "https://rseng.github.io/software/repository/github/domenico-simone/rmlst_api", "api_url": "https://rseng.github.io/software/api/repos/github/domenico-simone/rmlst_api"}, {"uid": "github/Parsl/parsl", "html_url": "https://rseng.github.io/software/repository/github/Parsl/parsl", "api_url": "https://rseng.github.io/software/api/repos/github/Parsl/parsl"}, {"uid": "github/PyLops/pylops-mpi", "html_url": "https://rseng.github.io/software/repository/github/PyLops/pylops-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/PyLops/pylops-mpi"}, {"uid": "github/jmcbroome/BTE", "html_url": "https://rseng.github.io/software/repository/github/jmcbroome/BTE", "api_url": "https://rseng.github.io/software/api/repos/github/jmcbroome/BTE"}, {"uid": "github/dbuscher/pois", "html_url": "https://rseng.github.io/software/repository/github/dbuscher/pois", "api_url": "https://rseng.github.io/software/api/repos/github/dbuscher/pois"}, {"uid": "github/devanshkv/fetch", "html_url": "https://rseng.github.io/software/repository/github/devanshkv/fetch", "api_url": "https://rseng.github.io/software/api/repos/github/devanshkv/fetch"}, {"uid": "github/SchlossLab/mikropml", "html_url": "https://rseng.github.io/software/repository/github/SchlossLab/mikropml", "api_url": "https://rseng.github.io/software/api/repos/github/SchlossLab/mikropml"}, {"uid": "github/Single-Cell-Graph-Learning/scSGL", "html_url": "https://rseng.github.io/software/repository/github/Single-Cell-Graph-Learning/scSGL", "api_url": "https://rseng.github.io/software/api/repos/github/Single-Cell-Graph-Learning/scSGL"}, {"uid": "github/langfzac/Photodynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/langfzac/Photodynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/langfzac/Photodynamics.jl"}, {"uid": "github/yangao07/TideHunter", "html_url": "https://rseng.github.io/software/repository/github/yangao07/TideHunter", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/TideHunter"}, {"uid": "github/yangao07/abPOA", "html_url": "https://rseng.github.io/software/repository/github/yangao07/abPOA", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/abPOA"}, {"uid": "github/openmm/openmm", "html_url": "https://rseng.github.io/software/repository/github/openmm/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/openmm/openmm"}, {"uid": "github/jlustigy/coronagraph", "html_url": "https://rseng.github.io/software/repository/github/jlustigy/coronagraph", "api_url": "https://rseng.github.io/software/api/repos/github/jlustigy/coronagraph"}, {"uid": "github/ulilautenschlager/crimp", "html_url": "https://rseng.github.io/software/repository/github/ulilautenschlager/crimp", "api_url": "https://rseng.github.io/software/api/repos/github/ulilautenschlager/crimp"}, {"uid": "github/monarch-initiative/loinc2hpo", "html_url": "https://rseng.github.io/software/repository/github/monarch-initiative/loinc2hpo", "api_url": "https://rseng.github.io/software/api/repos/github/monarch-initiative/loinc2hpo"}, {"uid": "github/tkerscher/blast", "html_url": "https://rseng.github.io/software/repository/github/tkerscher/blast", "api_url": "https://rseng.github.io/software/api/repos/github/tkerscher/blast"}, {"uid": "github/JGCRI/rfasst", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rfasst", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rfasst"}, {"uid": "github/JGCRI/stitches", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/stitches", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/stitches"}, {"uid": "github/JGCRI/osiris", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/osiris", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/osiris"}, {"uid": "github/JGCRI/tethys", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/tethys", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/tethys"}, {"uid": "github/JGCRI/ambrosia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/ambrosia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/ambrosia"}, {"uid": "github/JGCRI/rmap", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rmap", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rmap"}, {"uid": "github/JGCRI/plutus", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/plutus", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/plutus"}, {"uid": "github/JGCRI/gcamfaostat", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gcamfaostat", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gcamfaostat"}, {"uid": "github/JGCRI/HELPS", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/HELPS", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/HELPS"}, {"uid": "github/JGCRI/gaia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gaia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gaia"}, {"uid": "github/thom991/MSIQuickView", "html_url": "https://rseng.github.io/software/repository/github/thom991/MSIQuickView", "api_url": "https://rseng.github.io/software/api/repos/github/thom991/MSIQuickView"}, {"uid": "github/sunpy/sunpy", "html_url": "https://rseng.github.io/software/repository/github/sunpy/sunpy", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/sunpy"}, {"uid": "github/sunpy/ndcube", "html_url": "https://rseng.github.io/software/repository/github/sunpy/ndcube", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/ndcube"}, {"uid": "github/nbellomo/Multi_CLASS", "html_url": "https://rseng.github.io/software/repository/github/nbellomo/Multi_CLASS", "api_url": "https://rseng.github.io/software/api/repos/github/nbellomo/Multi_CLASS"}, {"uid": "github/aakepley/autobox", "html_url": "https://rseng.github.io/software/repository/github/aakepley/autobox", "api_url": "https://rseng.github.io/software/api/repos/github/aakepley/autobox"}, {"uid": "github/frescigno/magpy_rv", "html_url": "https://rseng.github.io/software/repository/github/frescigno/magpy_rv", "api_url": "https://rseng.github.io/software/api/repos/github/frescigno/magpy_rv"}, {"uid": "github/timothygebhard/ml4ptp", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/ml4ptp", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/ml4ptp"}, {"uid": "github/timothygebhard/fm4ar", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/fm4ar", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/fm4ar"}, {"uid": "github/tholoien/empiriciSN", "html_url": "https://rseng.github.io/software/repository/github/tholoien/empiriciSN", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/empiriciSN"}, {"uid": "github/tholoien/XDGMM", "html_url": "https://rseng.github.io/software/repository/github/tholoien/XDGMM", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/XDGMM"}, {"uid": "github/alerpaschoal/CODARFE", "html_url": "https://rseng.github.io/software/repository/github/alerpaschoal/CODARFE", "api_url": "https://rseng.github.io/software/api/repos/github/alerpaschoal/CODARFE"}, {"uid": "github/GeomScale/volesti", "html_url": "https://rseng.github.io/software/repository/github/GeomScale/volesti", "api_url": "https://rseng.github.io/software/api/repos/github/GeomScale/volesti"}, {"uid": "github/ysekig/GPMsDB-tk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-tk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-tk"}, {"uid": "github/ysekig/GPMsDB-dbtk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-dbtk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-dbtk"}, {"uid": "github/ci-for-research/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-research/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-research/self-hosted-runners"}, {"uid": "github/asgr/NFWdist", "html_url": "https://rseng.github.io/software/repository/github/asgr/NFWdist", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/NFWdist"}, {"uid": "github/asgr/ProFuse", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFuse", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFuse"}, {"uid": "github/asgr/Rwcs", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rwcs", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rwcs"}, {"uid": "github/asgr/ProSpect", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProSpect", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProSpect"}, {"uid": "github/asgr/ProFound", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFound", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFound"}, {"uid": "github/asgr/hyper.fit", "html_url": "https://rseng.github.io/software/repository/github/asgr/hyper.fit", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/hyper.fit"}, {"uid": "github/asgr/celestial", "html_url": "https://rseng.github.io/software/repository/github/asgr/celestial", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/celestial"}, {"uid": "github/asgr/ProPane", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProPane", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProPane"}, {"uid": "github/asgr/Rfits", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rfits", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rfits"}, {"uid": "github/SHTOOLS/SHTOOLS", "html_url": "https://rseng.github.io/software/repository/github/SHTOOLS/SHTOOLS", "api_url": "https://rseng.github.io/software/api/repos/github/SHTOOLS/SHTOOLS"}, {"uid": "github/gacou54/pyorthanc", "html_url": "https://rseng.github.io/software/repository/github/gacou54/pyorthanc", "api_url": "https://rseng.github.io/software/api/repos/github/gacou54/pyorthanc"}, {"uid": "github/i-VRESSE/workflow-builder", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/workflow-builder", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/workflow-builder"}, {"uid": "github/i-VRESSE/pdbtbx-ts", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/pdbtbx-ts", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/pdbtbx-ts"}, {"uid": "github/low-sky/cprops", "html_url": "https://rseng.github.io/software/repository/github/low-sky/cprops", "api_url": "https://rseng.github.io/software/api/repos/github/low-sky/cprops"}, {"uid": "github/Alcampopiano/hypothesize", "html_url": "https://rseng.github.io/software/repository/github/Alcampopiano/hypothesize", "api_url": "https://rseng.github.io/software/api/repos/github/Alcampopiano/hypothesize"}, {"uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_lGRBs"}, {"uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_sGRBs"}, {"uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "html_url": "https://rseng.github.io/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "api_url": "https://rseng.github.io/software/api/repos/github/AlphonsG/Rainbow-Optical-Flow-For-ALI"}, {"uid": "github/scotthgn/AGNvar", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/AGNvar", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/AGNvar"}, {"uid": "github/scotthgn/relagn", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/relagn", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/relagn"}, {"uid": "github/t-brandt/orvara", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/orvara", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/orvara"}, {"uid": "github/t-brandt/acorns-adi", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/acorns-adi", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/acorns-adi"}, {"uid": "github/t-brandt/fitramp", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/fitramp", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/fitramp"}, {"uid": "github/hmtabernero/SteParSyn", "html_url": "https://rseng.github.io/software/repository/github/hmtabernero/SteParSyn", "api_url": "https://rseng.github.io/software/api/repos/github/hmtabernero/SteParSyn"}, {"uid": "github/NMBU-Data-Science/RENT", "html_url": "https://rseng.github.io/software/repository/github/NMBU-Data-Science/RENT", "api_url": "https://rseng.github.io/software/api/repos/github/NMBU-Data-Science/RENT"}, {"uid": "github/krober10nd/SeismicMesh", "html_url": "https://rseng.github.io/software/repository/github/krober10nd/SeismicMesh", "api_url": "https://rseng.github.io/software/api/repos/github/krober10nd/SeismicMesh"}, {"uid": "github/ldliao/jointVIP", "html_url": "https://rseng.github.io/software/repository/github/ldliao/jointVIP", "api_url": "https://rseng.github.io/software/api/repos/github/ldliao/jointVIP"}, {"uid": "github/netrias/rnassist", "html_url": "https://rseng.github.io/software/repository/github/netrias/rnassist", "api_url": "https://rseng.github.io/software/api/repos/github/netrias/rnassist"}, {"uid": "github/timstaley/amisurvey", "html_url": "https://rseng.github.io/software/repository/github/timstaley/amisurvey", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/amisurvey"}, {"uid": "github/timstaley/voevent-parse", "html_url": "https://rseng.github.io/software/repository/github/timstaley/voevent-parse", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/voevent-parse"}, {"uid": "github/timstaley/chimenea", "html_url": "https://rseng.github.io/software/repository/github/timstaley/chimenea", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/chimenea"}, {"uid": "github/LMJL-Alea/ktest", "html_url": "https://rseng.github.io/software/repository/github/LMJL-Alea/ktest", "api_url": "https://rseng.github.io/software/api/repos/github/LMJL-Alea/ktest"}, {"uid": "github/kavonrtep/dante", "html_url": "https://rseng.github.io/software/repository/github/kavonrtep/dante", "api_url": "https://rseng.github.io/software/api/repos/github/kavonrtep/dante"}, {"uid": "github/atchekho/harmpi", "html_url": "https://rseng.github.io/software/repository/github/atchekho/harmpi", "api_url": "https://rseng.github.io/software/api/repos/github/atchekho/harmpi"}, {"uid": "github/drzeeshanahmed/JWES-Visual", "html_url": "https://rseng.github.io/software/repository/github/drzeeshanahmed/JWES-Visual", "api_url": "https://rseng.github.io/software/api/repos/github/drzeeshanahmed/JWES-Visual"}, {"uid": "github/qutip/qutip", "html_url": "https://rseng.github.io/software/repository/github/qutip/qutip", "api_url": "https://rseng.github.io/software/api/repos/github/qutip/qutip"}, {"uid": "github/cassidymwagner/fluidsf", "html_url": "https://rseng.github.io/software/repository/github/cassidymwagner/fluidsf", "api_url": "https://rseng.github.io/software/api/repos/github/cassidymwagner/fluidsf"}, {"uid": "github/GabrieleParimbelli/COLIBRI", "html_url": "https://rseng.github.io/software/repository/github/GabrieleParimbelli/COLIBRI", "api_url": "https://rseng.github.io/software/api/repos/github/GabrieleParimbelli/COLIBRI"}, {"uid": "github/msailer1234/JWST_Simulation", "html_url": "https://rseng.github.io/software/repository/github/msailer1234/JWST_Simulation", "api_url": "https://rseng.github.io/software/api/repos/github/msailer1234/JWST_Simulation"}, {"uid": "github/siriobelli/flame", "html_url": "https://rseng.github.io/software/repository/github/siriobelli/flame", "api_url": "https://rseng.github.io/software/api/repos/github/siriobelli/flame"}, {"uid": "github/schmidtfa/pyrasa", "html_url": "https://rseng.github.io/software/repository/github/schmidtfa/pyrasa", "api_url": "https://rseng.github.io/software/api/repos/github/schmidtfa/pyrasa"}, {"uid": "github/cgobat/asymmetric_uncertainty", "html_url": "https://rseng.github.io/software/repository/github/cgobat/asymmetric_uncertainty", "api_url": "https://rseng.github.io/software/api/repos/github/cgobat/asymmetric_uncertainty"}, {"uid": "github/shandley/hecatomb", "html_url": "https://rseng.github.io/software/repository/github/shandley/hecatomb", "api_url": "https://rseng.github.io/software/api/repos/github/shandley/hecatomb"}, {"uid": "github/fusk-kpu/StressResponseGenesAtlas", "html_url": "https://rseng.github.io/software/repository/github/fusk-kpu/StressResponseGenesAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/fusk-kpu/StressResponseGenesAtlas"}, {"uid": "github/jstjohn/SeqPrep", "html_url": "https://rseng.github.io/software/repository/github/jstjohn/SeqPrep", "api_url": "https://rseng.github.io/software/api/repos/github/jstjohn/SeqPrep"}, {"uid": "github/MichaelDAlbrow/CMDFitter", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/CMDFitter", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/CMDFitter"}, {"uid": "github/MichaelDAlbrow/pyDIA", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/pyDIA", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/pyDIA"}, {"uid": "github/MichaelDAlbrow/Dazzle", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/Dazzle", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/Dazzle"}, {"uid": "github/AlexanderJuestel/pyheatdemand", "html_url": "https://rseng.github.io/software/repository/github/AlexanderJuestel/pyheatdemand", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderJuestel/pyheatdemand"}, {"uid": "github/arumugamlab/msamtools", "html_url": "https://rseng.github.io/software/repository/github/arumugamlab/msamtools", "api_url": "https://rseng.github.io/software/api/repos/github/arumugamlab/msamtools"}, {"uid": "github/dylancromer/maszcal", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/maszcal", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/maszcal"}, {"uid": "github/dylancromer/ostrich", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/ostrich", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/ostrich"}, {"uid": "github/ci-for-science/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-science/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-science/self-hosted-runners"}, {"uid": "github/bcgov/shinyssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/shinyssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/shinyssdtools"}, {"uid": "github/bcgov/ssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/ssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/ssdtools"}, {"uid": "github/bcgov/bcdata", "html_url": "https://rseng.github.io/software/repository/github/bcgov/bcdata", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/bcdata"}, {"uid": "github/fury-gl/fury", "html_url": "https://rseng.github.io/software/repository/github/fury-gl/fury", "api_url": "https://rseng.github.io/software/api/repos/github/fury-gl/fury"}, {"uid": "github/coder/code-server", "html_url": "https://rseng.github.io/software/repository/github/coder/code-server", "api_url": "https://rseng.github.io/software/api/repos/github/coder/code-server"}, {"uid": "github/vbaliga/gaussplotR", "html_url": "https://rseng.github.io/software/repository/github/vbaliga/gaussplotR", "api_url": "https://rseng.github.io/software/api/repos/github/vbaliga/gaussplotR"}, {"uid": "github/ZJUFanLab/scTITANS", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/scTITANS", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/scTITANS"}, {"uid": "github/ZJUFanLab/bulk2space", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/bulk2space", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/bulk2space"}, {"uid": "github/JuliaLang/julia", "html_url": "https://rseng.github.io/software/repository/github/JuliaLang/julia", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaLang/julia"}, {"uid": "github/HannahMDoherty/ChemGAPP", "html_url": "https://rseng.github.io/software/repository/github/HannahMDoherty/ChemGAPP", "api_url": "https://rseng.github.io/software/api/repos/github/HannahMDoherty/ChemGAPP"}, {"uid": "github/joachimwolff/hyperparameterScoringHiC", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/hyperparameterScoringHiC", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/hyperparameterScoringHiC"}, {"uid": "github/joachimwolff/Hi-cGAN", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/Hi-cGAN", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/Hi-cGAN"}, {"uid": "github/CavendishAstrophysics/anmap", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/anmap", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/anmap"}, {"uid": "github/CavendishAstrophysics/postmortem", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/postmortem", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/postmortem"}, {"uid": "github/bc3LC/gcamreport", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/gcamreport", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/gcamreport"}, {"uid": "github/bc3LC/medusa", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/medusa"}, {"uid": "github/bc3LC/rhap", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/rhap", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/rhap"}, {"uid": "github/mrempel/geohexviz", "html_url": "https://rseng.github.io/software/repository/github/mrempel/geohexviz", "api_url": "https://rseng.github.io/software/api/repos/github/mrempel/geohexviz"}, {"uid": "github/vincentlab/PyFR", "html_url": "https://rseng.github.io/software/repository/github/vincentlab/PyFR", "api_url": "https://rseng.github.io/software/api/repos/github/vincentlab/PyFR"}, {"uid": "github/jianghuaijie/scLRTC", "html_url": "https://rseng.github.io/software/repository/github/jianghuaijie/scLRTC", "api_url": "https://rseng.github.io/software/api/repos/github/jianghuaijie/scLRTC"}, {"uid": "github/ukoethe/vigra", "html_url": "https://rseng.github.io/software/repository/github/ukoethe/vigra", "api_url": "https://rseng.github.io/software/api/repos/github/ukoethe/vigra"}, {"uid": "github/bpairet/mayo_hci", "html_url": "https://rseng.github.io/software/repository/github/bpairet/mayo_hci", "api_url": "https://rseng.github.io/software/api/repos/github/bpairet/mayo_hci"}, {"uid": "github/danStich/dia", "html_url": "https://rseng.github.io/software/repository/github/danStich/dia", "api_url": "https://rseng.github.io/software/api/repos/github/danStich/dia"}, {"uid": "github/OncoRNALab/CiLiQuant", "html_url": "https://rseng.github.io/software/repository/github/OncoRNALab/CiLiQuant", "api_url": "https://rseng.github.io/software/api/repos/github/OncoRNALab/CiLiQuant"}, {"uid": "github/fogellab/multiWGCNA", "html_url": "https://rseng.github.io/software/repository/github/fogellab/multiWGCNA", "api_url": "https://rseng.github.io/software/api/repos/github/fogellab/multiWGCNA"}, {"uid": "github/kanaverse/kana", "html_url": "https://rseng.github.io/software/repository/github/kanaverse/kana", "api_url": "https://rseng.github.io/software/api/repos/github/kanaverse/kana"}, {"uid": "github/cvbuchem/LavAtmos", "html_url": "https://rseng.github.io/software/repository/github/cvbuchem/LavAtmos", "api_url": "https://rseng.github.io/software/api/repos/github/cvbuchem/LavAtmos"}, {"uid": "github/skiehl/wwz", "html_url": "https://rseng.github.io/software/repository/github/skiehl/wwz", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/wwz"}, {"uid": "github/skiehl/lcsim", "html_url": "https://rseng.github.io/software/repository/github/skiehl/lcsim", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/lcsim"}, {"uid": "github/skiehl/polarizationtools", "html_url": "https://rseng.github.io/software/repository/github/skiehl/polarizationtools", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/polarizationtools"}, {"uid": "github/NikolayOskolkov/MCWorkflow", "html_url": "https://rseng.github.io/software/repository/github/NikolayOskolkov/MCWorkflow", "api_url": "https://rseng.github.io/software/api/repos/github/NikolayOskolkov/MCWorkflow"}, {"uid": "github/SDTC-CPMed/scDrugPrio", "html_url": "https://rseng.github.io/software/repository/github/SDTC-CPMed/scDrugPrio", "api_url": "https://rseng.github.io/software/api/repos/github/SDTC-CPMed/scDrugPrio"}, {"uid": "github/LindleyLentati/TempoNest", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/TempoNest", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/TempoNest"}, {"uid": "github/LindleyLentati/Cobra", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/Cobra", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/Cobra"}, {"uid": "github/seisman/HinetPy", "html_url": "https://rseng.github.io/software/repository/github/seisman/HinetPy", "api_url": "https://rseng.github.io/software/api/repos/github/seisman/HinetPy"}, {"uid": "github/Dylan-Aliberti/Kepler-Collisions", "html_url": "https://rseng.github.io/software/repository/github/Dylan-Aliberti/Kepler-Collisions", "api_url": "https://rseng.github.io/software/api/repos/github/Dylan-Aliberti/Kepler-Collisions"}, {"uid": "github/OpenBioLink/Explorer", "html_url": "https://rseng.github.io/software/repository/github/OpenBioLink/Explorer", "api_url": "https://rseng.github.io/software/api/repos/github/OpenBioLink/Explorer"}, {"uid": "github/gdalle/HiddenMarkovModels.jl", "html_url": "https://rseng.github.io/software/repository/github/gdalle/HiddenMarkovModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gdalle/HiddenMarkovModels.jl"}, {"uid": "github/Someone789/galax2d", "html_url": "https://rseng.github.io/software/repository/github/Someone789/galax2d", "api_url": "https://rseng.github.io/software/api/repos/github/Someone789/galax2d"}, {"uid": "github/metaOmics/MetaPath", "html_url": "https://rseng.github.io/software/repository/github/metaOmics/MetaPath", "api_url": "https://rseng.github.io/software/api/repos/github/metaOmics/MetaPath"}, {"uid": "github/BiodataAnalysisGroup/kmerAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/kmerAnalyzer"}, {"uid": "github/BiodataAnalysisGroup/UMIc", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/UMIc", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/UMIc"}, {"uid": "github/cns-iu/HRA-supporting-information", "html_url": "https://rseng.github.io/software/repository/github/cns-iu/HRA-supporting-information", "api_url": "https://rseng.github.io/software/api/repos/github/cns-iu/HRA-supporting-information"}, {"uid": "github/RJArthern/WAVI.jl", "html_url": "https://rseng.github.io/software/repository/github/RJArthern/WAVI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RJArthern/WAVI.jl"}, {"uid": "github/tp2vis/distribute", "html_url": "https://rseng.github.io/software/repository/github/tp2vis/distribute", "api_url": "https://rseng.github.io/software/api/repos/github/tp2vis/distribute"}, {"uid": "github/sjteresi/TE_Density", "html_url": "https://rseng.github.io/software/repository/github/sjteresi/TE_Density", "api_url": "https://rseng.github.io/software/api/repos/github/sjteresi/TE_Density"}, {"uid": "github/DragonflyTelescope/dfreproject", "html_url": "https://rseng.github.io/software/repository/github/DragonflyTelescope/dfreproject", "api_url": "https://rseng.github.io/software/api/repos/github/DragonflyTelescope/dfreproject"}, {"uid": "github/ablab/nerpa", "html_url": "https://rseng.github.io/software/repository/github/ablab/nerpa", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/nerpa"}, {"uid": "github/ablab/spades", "html_url": "https://rseng.github.io/software/repository/github/ablab/spades", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/spades"}, {"uid": "github/ablab/quast", "html_url": "https://rseng.github.io/software/repository/github/ablab/quast", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/quast"}, {"uid": "github/ablab/TandemTools", "html_url": "https://rseng.github.io/software/repository/github/ablab/TandemTools", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/TandemTools"}, {"uid": "github/nicolet5/DiffCapAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/nicolet5/DiffCapAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/nicolet5/DiffCapAnalyzer"}, {"uid": "github/carnotresearch/cr-sparse", "html_url": "https://rseng.github.io/software/repository/github/carnotresearch/cr-sparse", "api_url": "https://rseng.github.io/software/api/repos/github/carnotresearch/cr-sparse"}, {"uid": "github/PDBeurope/pdb-images", "html_url": "https://rseng.github.io/software/repository/github/PDBeurope/pdb-images", "api_url": "https://rseng.github.io/software/api/repos/github/PDBeurope/pdb-images"}, {"uid": "github/fjdu/rac-2d", "html_url": "https://rseng.github.io/software/repository/github/fjdu/rac-2d", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/rac-2d"}, {"uid": "github/fjdu/myRadex", "html_url": "https://rseng.github.io/software/repository/github/fjdu/myRadex", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/myRadex"}, {"uid": "github/djsutherland/py-sdm", "html_url": "https://rseng.github.io/software/repository/github/djsutherland/py-sdm", "api_url": "https://rseng.github.io/software/api/repos/github/djsutherland/py-sdm"}, {"uid": "github/torluca/morphofit", "html_url": "https://rseng.github.io/software/repository/github/torluca/morphofit", "api_url": "https://rseng.github.io/software/api/repos/github/torluca/morphofit"}, {"uid": "github/ClusterMonteCarlo/CMC-COSMIC", "html_url": "https://rseng.github.io/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ClusterMonteCarlo/CMC-COSMIC"}, {"uid": "github/Tomaubier/CoperniFUS", "html_url": "https://rseng.github.io/software/repository/github/Tomaubier/CoperniFUS", "api_url": "https://rseng.github.io/software/api/repos/github/Tomaubier/CoperniFUS"}, {"uid": "github/Astro-Sean/escatter", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/escatter", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/escatter"}, {"uid": "github/Astro-Sean/autophot", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/autophot", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/autophot"}, {"uid": "github/ericsteinbring/PDQ", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/PDQ", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/PDQ"}, {"uid": "github/ericsteinbring/World_Observatory", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/World_Observatory", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/World_Observatory"}, {"uid": "github/ericsteinbring/Special-Blurring", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/Special-Blurring", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/Special-Blurring"}, {"uid": "github/jakevdp/wpca", "html_url": "https://rseng.github.io/software/repository/github/jakevdp/wpca", "api_url": "https://rseng.github.io/software/api/repos/github/jakevdp/wpca"}, {"uid": "github/CNIC-Proteomics/TurboPutative-web", "html_url": "https://rseng.github.io/software/repository/github/CNIC-Proteomics/TurboPutative-web", "api_url": "https://rseng.github.io/software/api/repos/github/CNIC-Proteomics/TurboPutative-web"}, {"uid": "github/hues-platform/cesar-p-core", "html_url": "https://rseng.github.io/software/repository/github/hues-platform/cesar-p-core", "api_url": "https://rseng.github.io/software/api/repos/github/hues-platform/cesar-p-core"}, {"uid": "github/HenrykHaniewicz/PSRVoid", "html_url": "https://rseng.github.io/software/repository/github/HenrykHaniewicz/PSRVoid", "api_url": "https://rseng.github.io/software/api/repos/github/HenrykHaniewicz/PSRVoid"}, {"uid": "github/IRCAD/camp", "html_url": "https://rseng.github.io/software/repository/github/IRCAD/camp", "api_url": "https://rseng.github.io/software/api/repos/github/IRCAD/camp"}, {"uid": "github/londumas/redvsblue", "html_url": "https://rseng.github.io/software/repository/github/londumas/redvsblue", "api_url": "https://rseng.github.io/software/api/repos/github/londumas/redvsblue"}, {"uid": "github/ialopezt/GalLenspy", "html_url": "https://rseng.github.io/software/repository/github/ialopezt/GalLenspy", "api_url": "https://rseng.github.io/software/api/repos/github/ialopezt/GalLenspy"}, {"uid": "github/utrillalab/repromin", "html_url": "https://rseng.github.io/software/repository/github/utrillalab/repromin", "api_url": "https://rseng.github.io/software/api/repos/github/utrillalab/repromin"}, {"uid": "github/nedtaylor/athena", "html_url": "https://rseng.github.io/software/repository/github/nedtaylor/athena", "api_url": "https://rseng.github.io/software/api/repos/github/nedtaylor/athena"}, {"uid": "github/dib-lab/dammit", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/dammit", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/dammit"}, {"uid": "github/dib-lab/sourmash", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/sourmash"}, {"uid": "github/dib-lab/TheGreatGenotyper", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/TheGreatGenotyper", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/TheGreatGenotyper"}, {"uid": "github/vdhooftcompmet/MS2LDA", "html_url": "https://rseng.github.io/software/repository/github/vdhooftcompmet/MS2LDA", "api_url": "https://rseng.github.io/software/api/repos/github/vdhooftcompmet/MS2LDA"}, {"uid": "github/gperezs/StarcNet", "html_url": "https://rseng.github.io/software/repository/github/gperezs/StarcNet", "api_url": "https://rseng.github.io/software/api/repos/github/gperezs/StarcNet"}, {"uid": "github/fchuffar/epimedtools", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/epimedtools", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/epimedtools"}, {"uid": "github/fchuffar/protopackage", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/protopackage", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/protopackage"}, {"uid": "github/fchuffar/dmethr", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/dmethr", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/dmethr"}, {"uid": "github/yatisht/usher", "html_url": "https://rseng.github.io/software/repository/github/yatisht/usher", "api_url": "https://rseng.github.io/software/api/repos/github/yatisht/usher"}, {"uid": "github/nemesiscode/radtrancode", "html_url": "https://rseng.github.io/software/repository/github/nemesiscode/radtrancode", "api_url": "https://rseng.github.io/software/api/repos/github/nemesiscode/radtrancode"}, {"uid": "github/Punzo/SlicerAstro", "html_url": "https://rseng.github.io/software/repository/github/Punzo/SlicerAstro", "api_url": "https://rseng.github.io/software/api/repos/github/Punzo/SlicerAstro"}, {"uid": "github/haowenz/chromap", "html_url": "https://rseng.github.io/software/repository/github/haowenz/chromap", "api_url": "https://rseng.github.io/software/api/repos/github/haowenz/chromap"}, {"uid": "github/n8thangreen/BCEA", "html_url": "https://rseng.github.io/software/repository/github/n8thangreen/BCEA", "api_url": "https://rseng.github.io/software/api/repos/github/n8thangreen/BCEA"}, {"uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", "html_url": "https://rseng.github.io/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalRegulatoryGenomicsICL/TFBS"}, {"uid": "github/rx-li/EasyCellType", "html_url": "https://rseng.github.io/software/repository/github/rx-li/EasyCellType", "api_url": "https://rseng.github.io/software/api/repos/github/rx-li/EasyCellType"}, {"uid": "github/maxibor/sam2lca", "html_url": "https://rseng.github.io/software/repository/github/maxibor/sam2lca", "api_url": "https://rseng.github.io/software/api/repos/github/maxibor/sam2lca"}, {"uid": "github/hall-lab/speedseq", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/speedseq", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/speedseq"}, {"uid": "github/hall-lab/bamkit", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/bamkit", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/bamkit"}, {"uid": "github/WebSky-CITA/XGPaint.jl", "html_url": "https://rseng.github.io/software/repository/github/WebSky-CITA/XGPaint.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WebSky-CITA/XGPaint.jl"}, {"uid": "github/villrv/SuperRAENN", "html_url": "https://rseng.github.io/software/repository/github/villrv/SuperRAENN", "api_url": "https://rseng.github.io/software/api/repos/github/villrv/SuperRAENN"}, {"uid": "github/micahvista/MAMnet", "html_url": "https://rseng.github.io/software/repository/github/micahvista/MAMnet", "api_url": "https://rseng.github.io/software/api/repos/github/micahvista/MAMnet"}, {"uid": "github/LandSciTech/ccviR", "html_url": "https://rseng.github.io/software/repository/github/LandSciTech/ccviR", "api_url": "https://rseng.github.io/software/api/repos/github/LandSciTech/ccviR"}, {"uid": "github/phirling/pyc2ray", "html_url": "https://rseng.github.io/software/repository/github/phirling/pyc2ray", "api_url": "https://rseng.github.io/software/api/repos/github/phirling/pyc2ray"}, {"uid": "github/BerkeleyLab/caffeine", "html_url": "https://rseng.github.io/software/repository/github/BerkeleyLab/caffeine", "api_url": "https://rseng.github.io/software/api/repos/github/BerkeleyLab/caffeine"}, {"uid": "github/jkimlab/msPIPE", "html_url": "https://rseng.github.io/software/repository/github/jkimlab/msPIPE", "api_url": "https://rseng.github.io/software/api/repos/github/jkimlab/msPIPE"}, {"uid": "github/isoverse/isoreader", "html_url": "https://rseng.github.io/software/repository/github/isoverse/isoreader", "api_url": "https://rseng.github.io/software/api/repos/github/isoverse/isoreader"}, {"uid": "github/Degiacomi-Lab/molearn", "html_url": "https://rseng.github.io/software/repository/github/Degiacomi-Lab/molearn", "api_url": "https://rseng.github.io/software/api/repos/github/Degiacomi-Lab/molearn"}, {"uid": "github/SciOmicsLab/PhenoComb", "html_url": "https://rseng.github.io/software/repository/github/SciOmicsLab/PhenoComb", "api_url": "https://rseng.github.io/software/api/repos/github/SciOmicsLab/PhenoComb"}, {"uid": "github/epfl-radio-astro/PINION", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/PINION", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/PINION"}, {"uid": "github/epfl-radio-astro/LiSA", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/LiSA", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/LiSA"}, {"uid": "github/mpound/pdrtpy", "html_url": "https://rseng.github.io/software/repository/github/mpound/pdrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/pdrtpy"}, {"uid": "github/mpound/comb", "html_url": "https://rseng.github.io/software/repository/github/mpound/comb", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/comb"}, {"uid": "github/snfactory/binaryoffset", "html_url": "https://rseng.github.io/software/repository/github/snfactory/binaryoffset", "api_url": "https://rseng.github.io/software/api/repos/github/snfactory/binaryoffset"}, {"uid": "github/schochastics/graphlayouts", "html_url": "https://rseng.github.io/software/repository/github/schochastics/graphlayouts", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/graphlayouts"}, {"uid": "github/schochastics/netrankr", "html_url": "https://rseng.github.io/software/repository/github/schochastics/netrankr", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/netrankr"}, {"uid": "github/schochastics/signnet", "html_url": "https://rseng.github.io/software/repository/github/schochastics/signnet", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/signnet"}, {"uid": "github/pcingola/SnpEff", "html_url": "https://rseng.github.io/software/repository/github/pcingola/SnpEff", "api_url": "https://rseng.github.io/software/api/repos/github/pcingola/SnpEff"}, {"uid": "github/surf-eds/one-button-compute", "html_url": "https://rseng.github.io/software/repository/github/surf-eds/one-button-compute", "api_url": "https://rseng.github.io/software/api/repos/github/surf-eds/one-button-compute"}, {"uid": "github/SuperKogito/spafe", "html_url": "https://rseng.github.io/software/repository/github/SuperKogito/spafe", "api_url": "https://rseng.github.io/software/api/repos/github/SuperKogito/spafe"}, {"uid": "github/mehdirezaie/SYSNet", "html_url": "https://rseng.github.io/software/repository/github/mehdirezaie/SYSNet", "api_url": "https://rseng.github.io/software/api/repos/github/mehdirezaie/SYSNet"}, {"uid": "github/NathanSandford/Chem-I-Calc", "html_url": "https://rseng.github.io/software/repository/github/NathanSandford/Chem-I-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSandford/Chem-I-Calc"}, {"uid": "github/exoclim/aeolus", "html_url": "https://rseng.github.io/software/repository/github/exoclim/aeolus", "api_url": "https://rseng.github.io/software/api/repos/github/exoclim/aeolus"}, {"uid": "github/mendezVKI/MODULO", "html_url": "https://rseng.github.io/software/repository/github/mendezVKI/MODULO", "api_url": "https://rseng.github.io/software/api/repos/github/mendezVKI/MODULO"}, {"uid": "github/QZH2022/germline_flow", "html_url": "https://rseng.github.io/software/repository/github/QZH2022/germline_flow", "api_url": "https://rseng.github.io/software/api/repos/github/QZH2022/germline_flow"}, {"uid": "github/christophuv/PeakBot_example", "html_url": "https://rseng.github.io/software/repository/github/christophuv/PeakBot_example", "api_url": "https://rseng.github.io/software/api/repos/github/christophuv/PeakBot_example"}, {"uid": "github/csiro-risk-assessment/mozzie", "html_url": "https://rseng.github.io/software/repository/github/csiro-risk-assessment/mozzie", "api_url": "https://rseng.github.io/software/api/repos/github/csiro-risk-assessment/mozzie"}, {"uid": "github/TORCH-Consortium/MAGMA", "html_url": "https://rseng.github.io/software/repository/github/TORCH-Consortium/MAGMA", "api_url": "https://rseng.github.io/software/api/repos/github/TORCH-Consortium/MAGMA"}, {"uid": "github/markur4/plotastic", "html_url": "https://rseng.github.io/software/repository/github/markur4/plotastic", "api_url": "https://rseng.github.io/software/api/repos/github/markur4/plotastic"}, {"uid": "github/dgerosa/spops", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/spops", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/spops"}, {"uid": "github/dgerosa/gwdet", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/gwdet", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/gwdet"}, {"uid": "github/dgerosa/surrkick", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/surrkick", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/surrkick"}, {"uid": "github/mpc-bioinformatics/CalibraCurve", "html_url": "https://rseng.github.io/software/repository/github/mpc-bioinformatics/CalibraCurve", "api_url": "https://rseng.github.io/software/api/repos/github/mpc-bioinformatics/CalibraCurve"}, {"uid": "github/cosmostat/pmclib", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/pmclib", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/pmclib"}, {"uid": "github/cosmostat/CosmoPMC", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/CosmoPMC", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/CosmoPMC"}, {"uid": "github/cosmostat/nicaea", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/nicaea", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/nicaea"}, {"uid": "github/xavierdidelot/clonalorigin", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/clonalorigin", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/clonalorigin"}, {"uid": "github/xavierdidelot/ClonalFrameML", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/ClonalFrameML", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/ClonalFrameML"}, {"uid": "github/martin3141/spant", "html_url": "https://rseng.github.io/software/repository/github/martin3141/spant", "api_url": "https://rseng.github.io/software/api/repos/github/martin3141/spant"}, {"uid": "github/PathwayCommons/grounding-search", "html_url": "https://rseng.github.io/software/repository/github/PathwayCommons/grounding-search", "api_url": "https://rseng.github.io/software/api/repos/github/PathwayCommons/grounding-search"}, {"uid": "github/EpiVec/TDLM", "html_url": "https://rseng.github.io/software/repository/github/EpiVec/TDLM", "api_url": "https://rseng.github.io/software/api/repos/github/EpiVec/TDLM"}, {"uid": "github/ryokbys/nap", "html_url": "https://rseng.github.io/software/repository/github/ryokbys/nap", "api_url": "https://rseng.github.io/software/api/repos/github/ryokbys/nap"}, {"uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPOMDP/CompressedBeliefMDPs.jl"}, {"uid": "github/backyardworlds/wiseview", "html_url": "https://rseng.github.io/software/repository/github/backyardworlds/wiseview", "api_url": "https://rseng.github.io/software/api/repos/github/backyardworlds/wiseview"}, {"uid": "github/smithlabcode/dnmtools", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/dnmtools", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/dnmtools"}, {"uid": "github/smithlabcode/falco", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/falco", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/falco"}, {"uid": "github/smithlabcode/abismal", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/abismal", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/abismal"}, {"uid": "github/smithlabcode/preseq", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/preseq", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/preseq"}, {"uid": "github/zavolanlab/PAQR2", "html_url": "https://rseng.github.io/software/repository/github/zavolanlab/PAQR2", "api_url": "https://rseng.github.io/software/api/repos/github/zavolanlab/PAQR2"}, {"uid": "github/tvh0021/aweSOM", "html_url": "https://rseng.github.io/software/repository/github/tvh0021/aweSOM", "api_url": "https://rseng.github.io/software/api/repos/github/tvh0021/aweSOM"}, {"uid": "github/AUTODIAL/AutoEIS", "html_url": "https://rseng.github.io/software/repository/github/AUTODIAL/AutoEIS", "api_url": "https://rseng.github.io/software/api/repos/github/AUTODIAL/AutoEIS"}, {"uid": "github/juzikong/photGalIMF", "html_url": "https://rseng.github.io/software/repository/github/juzikong/photGalIMF", "api_url": "https://rseng.github.io/software/api/repos/github/juzikong/photGalIMF"}, {"uid": "github/HITS-AIN/PINK", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/PINK", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/PINK"}, {"uid": "github/HITS-AIN/GPCC.jl", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/GPCC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/GPCC.jl"}, {"uid": "github/hajimes/mmh3", "html_url": "https://rseng.github.io/software/repository/github/hajimes/mmh3", "api_url": "https://rseng.github.io/software/api/repos/github/hajimes/mmh3"}, {"uid": "github/adrn/SuperFreq", "html_url": "https://rseng.github.io/software/repository/github/adrn/SuperFreq", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/SuperFreq"}, {"uid": "github/adrn/schwimmbad", "html_url": "https://rseng.github.io/software/repository/github/adrn/schwimmbad", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/schwimmbad"}, {"uid": "github/adrn/pyia", "html_url": "https://rseng.github.io/software/repository/github/adrn/pyia", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/pyia"}, {"uid": "github/huiwenke/MineProt", "html_url": "https://rseng.github.io/software/repository/github/huiwenke/MineProt", "api_url": "https://rseng.github.io/software/api/repos/github/huiwenke/MineProt"}, {"uid": "github/wajidarshad/ESIDE", "html_url": "https://rseng.github.io/software/repository/github/wajidarshad/ESIDE", "api_url": "https://rseng.github.io/software/api/repos/github/wajidarshad/ESIDE"}, {"uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", "html_url": "https://rseng.github.io/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Rohit-Kundu/ET-NET_Covid-Detection"}, {"uid": "github/PyPSA/linopy", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/linopy", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/linopy"}, {"uid": "github/PyPSA/atlite", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/atlite", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/atlite"}, {"uid": "github/guilledufort/EnanoFASTQ", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EnanoFASTQ", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EnanoFASTQ"}, {"uid": "github/guilledufort/EMVC-2", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EMVC-2", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EMVC-2"}, {"uid": "github/oorb/oorb", "html_url": "https://rseng.github.io/software/repository/github/oorb/oorb", "api_url": "https://rseng.github.io/software/api/repos/github/oorb/oorb"}, {"uid": "github/neeravkaushal/RIDs-in-WCDs", "html_url": "https://rseng.github.io/software/repository/github/neeravkaushal/RIDs-in-WCDs", "api_url": "https://rseng.github.io/software/api/repos/github/neeravkaushal/RIDs-in-WCDs"}, {"uid": "github/thejasvibr/bat_beamshapes", "html_url": "https://rseng.github.io/software/repository/github/thejasvibr/bat_beamshapes", "api_url": "https://rseng.github.io/software/api/repos/github/thejasvibr/bat_beamshapes"}, {"uid": "github/tylunel/pvpumpingsystem", "html_url": "https://rseng.github.io/software/repository/github/tylunel/pvpumpingsystem", "api_url": "https://rseng.github.io/software/api/repos/github/tylunel/pvpumpingsystem"}, {"uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", "html_url": "https://rseng.github.io/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", "api_url": "https://rseng.github.io/software/api/repos/github/Wenxin-Wan/ephor_wp4_method_tutorial"}, {"uid": "github/Hi-COLACode/Hi-COLA", "html_url": "https://rseng.github.io/software/repository/github/Hi-COLACode/Hi-COLA", "api_url": "https://rseng.github.io/software/api/repos/github/Hi-COLACode/Hi-COLA"}, {"uid": "github/OpenQuantumComputing/quantumreservoirpy", "html_url": "https://rseng.github.io/software/repository/github/OpenQuantumComputing/quantumreservoirpy", "api_url": "https://rseng.github.io/software/api/repos/github/OpenQuantumComputing/quantumreservoirpy"}, {"uid": "github/profjsb/deepCR", "html_url": "https://rseng.github.io/software/repository/github/profjsb/deepCR", "api_url": "https://rseng.github.io/software/api/repos/github/profjsb/deepCR"}, {"uid": "github/robdjeff/eagles", "html_url": "https://rseng.github.io/software/repository/github/robdjeff/eagles", "api_url": "https://rseng.github.io/software/api/repos/github/robdjeff/eagles"}, {"uid": "github/MickaelRigault/skysurvey", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/skysurvey", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/skysurvey"}, {"uid": "github/MickaelRigault/ztfquery", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/ztfquery", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/ztfquery"}, {"uid": "github/soleneulmer/bem", "html_url": "https://rseng.github.io/software/repository/github/soleneulmer/bem", "api_url": "https://rseng.github.io/software/api/repos/github/soleneulmer/bem"}, {"uid": "github/aviadpi/SparseBLS", "html_url": "https://rseng.github.io/software/repository/github/aviadpi/SparseBLS", "api_url": "https://rseng.github.io/software/api/repos/github/aviadpi/SparseBLS"}, {"uid": "github/Glogobyte/miRGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Glogobyte/miRGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Glogobyte/miRGalaxy"}, {"uid": "github/predsci/hipft", "html_url": "https://rseng.github.io/software/repository/github/predsci/hipft", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/hipft"}, {"uid": "github/predsci/OFT", "html_url": "https://rseng.github.io/software/repository/github/predsci/OFT", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/OFT"}, {"uid": "github/probml/dynamax", "html_url": "https://rseng.github.io/software/repository/github/probml/dynamax", "api_url": "https://rseng.github.io/software/api/repos/github/probml/dynamax"}, {"uid": "github/OSS-Lab/ChemChaste", "html_url": "https://rseng.github.io/software/repository/github/OSS-Lab/ChemChaste", "api_url": "https://rseng.github.io/software/api/repos/github/OSS-Lab/ChemChaste"}, {"uid": "github/DataIntellSystLab/KARGA", "html_url": "https://rseng.github.io/software/repository/github/DataIntellSystLab/KARGA", "api_url": "https://rseng.github.io/software/api/repos/github/DataIntellSystLab/KARGA"}, {"uid": "github/nathanael-fijalkow/DeepSynth", "html_url": "https://rseng.github.io/software/repository/github/nathanael-fijalkow/DeepSynth", "api_url": "https://rseng.github.io/software/api/repos/github/nathanael-fijalkow/DeepSynth"}, {"uid": "github/folsomcp/specpolFlow", "html_url": "https://rseng.github.io/software/repository/github/folsomcp/specpolFlow", "api_url": "https://rseng.github.io/software/api/repos/github/folsomcp/specpolFlow"}, {"uid": "github/CouncilDataProject/speakerbox", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/speakerbox", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/speakerbox"}, {"uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/cookiecutter-cdp-deployment"}, {"uid": "github/jmhuie/Slicer-SegmentGeometry", "html_url": "https://rseng.github.io/software/repository/github/jmhuie/Slicer-SegmentGeometry", "api_url": "https://rseng.github.io/software/api/repos/github/jmhuie/Slicer-SegmentGeometry"}, {"uid": "github/Washington-University/CiftiLib", "html_url": "https://rseng.github.io/software/repository/github/Washington-University/CiftiLib", "api_url": "https://rseng.github.io/software/api/repos/github/Washington-University/CiftiLib"}, {"uid": "github/darrenjw/jax-smfsb", "html_url": "https://rseng.github.io/software/repository/github/darrenjw/jax-smfsb", "api_url": "https://rseng.github.io/software/api/repos/github/darrenjw/jax-smfsb"}, {"uid": "github/WangLabTHU/DeSP", "html_url": "https://rseng.github.io/software/repository/github/WangLabTHU/DeSP", "api_url": "https://rseng.github.io/software/api/repos/github/WangLabTHU/DeSP"}, {"uid": "github/marinebon/obisindicators", "html_url": "https://rseng.github.io/software/repository/github/marinebon/obisindicators", "api_url": "https://rseng.github.io/software/api/repos/github/marinebon/obisindicators"}, {"uid": "github/soylentdeen/MoogStokes", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/MoogStokes", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/MoogStokes"}, {"uid": "github/soylentdeen/CounterPoint", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/CounterPoint", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/CounterPoint"}, {"uid": "github/precice/micro-manager", "html_url": "https://rseng.github.io/software/repository/github/precice/micro-manager", "api_url": "https://rseng.github.io/software/api/repos/github/precice/micro-manager"}, {"uid": "github/precice/aste", "html_url": "https://rseng.github.io/software/repository/github/precice/aste", "api_url": "https://rseng.github.io/software/api/repos/github/precice/aste"}, {"uid": "github/Midnighter/dependency-info", "html_url": "https://rseng.github.io/software/repository/github/Midnighter/dependency-info", "api_url": "https://rseng.github.io/software/api/repos/github/Midnighter/dependency-info"}, {"uid": "github/dianna-ai/dianna", "html_url": "https://rseng.github.io/software/repository/github/dianna-ai/dianna", "api_url": "https://rseng.github.io/software/api/repos/github/dianna-ai/dianna"}, {"uid": "github/bandframework/Taweret", "html_url": "https://rseng.github.io/software/repository/github/bandframework/Taweret", "api_url": "https://rseng.github.io/software/api/repos/github/bandframework/Taweret"}, {"uid": "github/damonge/CUTE", "html_url": "https://rseng.github.io/software/repository/github/damonge/CUTE", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CUTE"}, {"uid": "github/damonge/schNell", "html_url": "https://rseng.github.io/software/repository/github/damonge/schNell", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/schNell"}, {"uid": "github/damonge/CoLoRe", "html_url": "https://rseng.github.io/software/repository/github/damonge/CoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CoLoRe"}, {"uid": "github/damonge/CRIME", "html_url": "https://rseng.github.io/software/repository/github/damonge/CRIME", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CRIME"}, {"uid": "github/DHortaD/Lux", "html_url": "https://rseng.github.io/software/repository/github/DHortaD/Lux", "api_url": "https://rseng.github.io/software/api/repos/github/DHortaD/Lux"}, {"uid": "github/Open-Minds-Lab/MRdataset", "html_url": "https://rseng.github.io/software/repository/github/Open-Minds-Lab/MRdataset", "api_url": "https://rseng.github.io/software/api/repos/github/Open-Minds-Lab/MRdataset"}, {"uid": "github/MICCoM/SSAGES-public", "html_url": "https://rseng.github.io/software/repository/github/MICCoM/SSAGES-public", "api_url": "https://rseng.github.io/software/api/repos/github/MICCoM/SSAGES-public"}, {"uid": "github/saezlab/liana-py", "html_url": "https://rseng.github.io/software/repository/github/saezlab/liana-py", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/liana-py"}, {"uid": "github/saezlab/PHONEMeS", "html_url": "https://rseng.github.io/software/repository/github/saezlab/PHONEMeS", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/PHONEMeS"}, {"uid": "github/trevorgokey/besmarts", "html_url": "https://rseng.github.io/software/repository/github/trevorgokey/besmarts", "api_url": "https://rseng.github.io/software/api/repos/github/trevorgokey/besmarts"}, {"uid": "github/gogrean/PyXel", "html_url": "https://rseng.github.io/software/repository/github/gogrean/PyXel", "api_url": "https://rseng.github.io/software/api/repos/github/gogrean/PyXel"}, {"uid": "github/taoliu/MACS", "html_url": "https://rseng.github.io/software/repository/github/taoliu/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/taoliu/MACS"}, {"uid": "github/Pithikos/C-Thread-Pool", "html_url": "https://rseng.github.io/software/repository/github/Pithikos/C-Thread-Pool", "api_url": "https://rseng.github.io/software/api/repos/github/Pithikos/C-Thread-Pool"}, {"uid": "github/jgrembi/riskCommunicator", "html_url": "https://rseng.github.io/software/repository/github/jgrembi/riskCommunicator", "api_url": "https://rseng.github.io/software/api/repos/github/jgrembi/riskCommunicator"}, {"uid": "github/prmunday/Immunolyser", "html_url": "https://rseng.github.io/software/repository/github/prmunday/Immunolyser", "api_url": "https://rseng.github.io/software/api/repos/github/prmunday/Immunolyser"}, {"uid": "github/NERC-CEH/RMAVIS", "html_url": "https://rseng.github.io/software/repository/github/NERC-CEH/RMAVIS", "api_url": "https://rseng.github.io/software/api/repos/github/NERC-CEH/RMAVIS"}, {"uid": "github/JulioHC00/PEPITA", "html_url": "https://rseng.github.io/software/repository/github/JulioHC00/PEPITA", "api_url": "https://rseng.github.io/software/api/repos/github/JulioHC00/PEPITA"}, {"uid": "github/mbejger/polgraw-allsky", "html_url": "https://rseng.github.io/software/repository/github/mbejger/polgraw-allsky", "api_url": "https://rseng.github.io/software/api/repos/github/mbejger/polgraw-allsky"}, {"uid": "github/ANTsX/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ANTsX/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ANTsX/ANTs"}, {"uid": "github/ml-evs/matador", "html_url": "https://rseng.github.io/software/repository/github/ml-evs/matador", "api_url": "https://rseng.github.io/software/api/repos/github/ml-evs/matador"}, {"uid": "github/ks905383/xagg", "html_url": "https://rseng.github.io/software/repository/github/ks905383/xagg", "api_url": "https://rseng.github.io/software/api/repos/github/ks905383/xagg"}, {"uid": "github/martinghunt/ziplign", "html_url": "https://rseng.github.io/software/repository/github/martinghunt/ziplign", "api_url": "https://rseng.github.io/software/api/repos/github/martinghunt/ziplign"}, {"uid": "github/sandmanns/CopyDetective", "html_url": "https://rseng.github.io/software/repository/github/sandmanns/CopyDetective", "api_url": "https://rseng.github.io/software/api/repos/github/sandmanns/CopyDetective"}, {"uid": "github/HDFGroup/hdf5", "html_url": "https://rseng.github.io/software/repository/github/HDFGroup/hdf5", "api_url": "https://rseng.github.io/software/api/repos/github/HDFGroup/hdf5"}, {"uid": "github/jarvist/Julia-Phonons", "html_url": "https://rseng.github.io/software/repository/github/jarvist/Julia-Phonons", "api_url": "https://rseng.github.io/software/api/repos/github/jarvist/Julia-Phonons"}, {"uid": "github/stermzsofi/TiDE", "html_url": "https://rseng.github.io/software/repository/github/stermzsofi/TiDE", "api_url": "https://rseng.github.io/software/api/repos/github/stermzsofi/TiDE"}, {"uid": "github/KathrynJones1/catwoman", "html_url": "https://rseng.github.io/software/repository/github/KathrynJones1/catwoman", "api_url": "https://rseng.github.io/software/api/repos/github/KathrynJones1/catwoman"}, {"uid": "github/networkx/networkx", "html_url": "https://rseng.github.io/software/repository/github/networkx/networkx", "api_url": "https://rseng.github.io/software/api/repos/github/networkx/networkx"}, {"uid": "github/bloch-labs/bloch", "html_url": "https://rseng.github.io/software/repository/github/bloch-labs/bloch", "api_url": "https://rseng.github.io/software/api/repos/github/bloch-labs/bloch"}, {"uid": "github/eltevo/steps", "html_url": "https://rseng.github.io/software/repository/github/eltevo/steps", "api_url": "https://rseng.github.io/software/api/repos/github/eltevo/steps"}, {"uid": "github/scikit-learn-contrib/hdbscan", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn-contrib/hdbscan", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn-contrib/hdbscan"}, {"uid": "github/GenomePathogenAnalysisService/read-it-and-keep", "html_url": "https://rseng.github.io/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", "api_url": "https://rseng.github.io/software/api/repos/github/GenomePathogenAnalysisService/read-it-and-keep"}, {"uid": "github/athob/py-ananke", "html_url": "https://rseng.github.io/software/repository/github/athob/py-ananke", "api_url": "https://rseng.github.io/software/api/repos/github/athob/py-ananke"}, {"uid": "github/Anirbancosmo/limpy", "html_url": "https://rseng.github.io/software/repository/github/Anirbancosmo/limpy", "api_url": "https://rseng.github.io/software/api/repos/github/Anirbancosmo/limpy"}, {"uid": "github/grd349/PBjam", "html_url": "https://rseng.github.io/software/repository/github/grd349/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/grd349/PBjam"}, {"uid": "github/AstroUGent/shadowfax", "html_url": "https://rseng.github.io/software/repository/github/AstroUGent/shadowfax", "api_url": "https://rseng.github.io/software/api/repos/github/AstroUGent/shadowfax"}, {"uid": "github/parmoo/parmoo", "html_url": "https://rseng.github.io/software/repository/github/parmoo/parmoo", "api_url": "https://rseng.github.io/software/api/repos/github/parmoo/parmoo"}, {"uid": "github/SIOSlab/exodetbox", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/exodetbox", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/exodetbox"}, {"uid": "github/SIOSlab/NEXO", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/NEXO", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/NEXO"}, {"uid": "github/DGtal-team/DGtal", "html_url": "https://rseng.github.io/software/repository/github/DGtal-team/DGtal", "api_url": "https://rseng.github.io/software/api/repos/github/DGtal-team/DGtal"}, {"uid": "github/fgbuster/fgbuster", "html_url": "https://rseng.github.io/software/repository/github/fgbuster/fgbuster", "api_url": "https://rseng.github.io/software/api/repos/github/fgbuster/fgbuster"}, {"uid": "github/c-zhou/yahs", "html_url": "https://rseng.github.io/software/repository/github/c-zhou/yahs", "api_url": "https://rseng.github.io/software/api/repos/github/c-zhou/yahs"}, {"uid": "github/NickMilsonPhysics/BinaryStarSolver", "html_url": "https://rseng.github.io/software/repository/github/NickMilsonPhysics/BinaryStarSolver", "api_url": "https://rseng.github.io/software/api/repos/github/NickMilsonPhysics/BinaryStarSolver"}, {"uid": "github/martinfleis/clustergram", "html_url": "https://rseng.github.io/software/repository/github/martinfleis/clustergram", "api_url": "https://rseng.github.io/software/api/repos/github/martinfleis/clustergram"}, {"uid": "github/surhh/nfitsview", "html_url": "https://rseng.github.io/software/repository/github/surhh/nfitsview", "api_url": "https://rseng.github.io/software/api/repos/github/surhh/nfitsview"}, {"uid": "github/wwood/kingfisher-download", "html_url": "https://rseng.github.io/software/repository/github/wwood/kingfisher-download", "api_url": "https://rseng.github.io/software/api/repos/github/wwood/kingfisher-download"}, {"uid": "github/jfmrod/MAPseq", "html_url": "https://rseng.github.io/software/repository/github/jfmrod/MAPseq", "api_url": "https://rseng.github.io/software/api/repos/github/jfmrod/MAPseq"}, {"uid": "github/jeancmaia/mcglm", "html_url": "https://rseng.github.io/software/repository/github/jeancmaia/mcglm", "api_url": "https://rseng.github.io/software/api/repos/github/jeancmaia/mcglm"}, {"uid": "github/nell-byler/cloudyfsps", "html_url": "https://rseng.github.io/software/repository/github/nell-byler/cloudyfsps", "api_url": "https://rseng.github.io/software/api/repos/github/nell-byler/cloudyfsps"}, {"uid": "github/erf-model/ERF", "html_url": "https://rseng.github.io/software/repository/github/erf-model/ERF", "api_url": "https://rseng.github.io/software/api/repos/github/erf-model/ERF"}, {"uid": "github/AIgnesti/PT-REX", "html_url": "https://rseng.github.io/software/repository/github/AIgnesti/PT-REX", "api_url": "https://rseng.github.io/software/api/repos/github/AIgnesti/PT-REX"}, {"uid": "github/Hyperthetical/DarkMatters", "html_url": "https://rseng.github.io/software/repository/github/Hyperthetical/DarkMatters", "api_url": "https://rseng.github.io/software/api/repos/github/Hyperthetical/DarkMatters"}, {"uid": "github/RTIP/artip", "html_url": "https://rseng.github.io/software/repository/github/RTIP/artip", "api_url": "https://rseng.github.io/software/api/repos/github/RTIP/artip"}, {"uid": "github/DidierMurilloF/FielDHub", "html_url": "https://rseng.github.io/software/repository/github/DidierMurilloF/FielDHub", "api_url": "https://rseng.github.io/software/api/repos/github/DidierMurilloF/FielDHub"}, {"uid": "github/BaroudLab/Griottes", "html_url": "https://rseng.github.io/software/repository/github/BaroudLab/Griottes", "api_url": "https://rseng.github.io/software/api/repos/github/BaroudLab/Griottes"}, {"uid": "github/projectmesa/mesa", "html_url": "https://rseng.github.io/software/repository/github/projectmesa/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/projectmesa/mesa"}, {"uid": "github/JulianBMunoz/Zeus21", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/Zeus21", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/Zeus21"}, {"uid": "github/JulianBMunoz/21cmvFAST", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/21cmvFAST", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/21cmvFAST"}, {"uid": "github/JulianBMunoz/RelicFast", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/RelicFast", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/RelicFast"}, {"uid": "github/tldr-group/samba-web", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/samba-web", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/samba-web"}, {"uid": "github/tldr-group/taufactor", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/taufactor", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/taufactor"}, {"uid": "github/kmlefran/aiida-aimall", "html_url": "https://rseng.github.io/software/repository/github/kmlefran/aiida-aimall", "api_url": "https://rseng.github.io/software/api/repos/github/kmlefran/aiida-aimall"}, {"uid": "github/GeoscienceAustralia/eo-tides", "html_url": "https://rseng.github.io/software/repository/github/GeoscienceAustralia/eo-tides", "api_url": "https://rseng.github.io/software/api/repos/github/GeoscienceAustralia/eo-tides"}, {"uid": "github/lengoctram/DustPOL-py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL-py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL-py"}, {"uid": "github/lengoctram/DustPOL_py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL_py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL_py"}, {"uid": "github/ernewton/tellrv", "html_url": "https://rseng.github.io/software/repository/github/ernewton/tellrv", "api_url": "https://rseng.github.io/software/api/repos/github/ernewton/tellrv"}, {"uid": "github/mengaldo/PySPOD", "html_url": "https://rseng.github.io/software/repository/github/mengaldo/PySPOD", "api_url": "https://rseng.github.io/software/api/repos/github/mengaldo/PySPOD"}, {"uid": "github/kusmic/pycosie", "html_url": "https://rseng.github.io/software/repository/github/kusmic/pycosie", "api_url": "https://rseng.github.io/software/api/repos/github/kusmic/pycosie"}, {"uid": "github/mr-superonion/FPFS", "html_url": "https://rseng.github.io/software/repository/github/mr-superonion/FPFS", "api_url": "https://rseng.github.io/software/api/repos/github/mr-superonion/FPFS"}, {"uid": "github/JuliaArrays/BlockArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/BlockArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/BlockArrays.jl"}, {"uid": "github/JuliaArrays/InfiniteArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/InfiniteArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/InfiniteArrays.jl"}, {"uid": "github/JuliaArrays/LazyArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/LazyArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/LazyArrays.jl"}, {"uid": "github/Alymantara/pydoppler", "html_url": "https://rseng.github.io/software/repository/github/Alymantara/pydoppler", "api_url": "https://rseng.github.io/software/api/repos/github/Alymantara/pydoppler"}, {"uid": "github/salbalkus/CausalTables.jl", "html_url": "https://rseng.github.io/software/repository/github/salbalkus/CausalTables.jl", "api_url": "https://rseng.github.io/software/api/repos/github/salbalkus/CausalTables.jl"}, {"uid": "github/SYalouz/QuantNBody", "html_url": "https://rseng.github.io/software/repository/github/SYalouz/QuantNBody", "api_url": "https://rseng.github.io/software/api/repos/github/SYalouz/QuantNBody"}, {"uid": "github/s-will/LocARNA", "html_url": "https://rseng.github.io/software/repository/github/s-will/LocARNA", "api_url": "https://rseng.github.io/software/api/repos/github/s-will/LocARNA"}, {"uid": "github/GreiffLab/immuneREF", "html_url": "https://rseng.github.io/software/repository/github/GreiffLab/immuneREF", "api_url": "https://rseng.github.io/software/api/repos/github/GreiffLab/immuneREF"}, {"uid": "github/jorgensd/adios4dolfinx", "html_url": "https://rseng.github.io/software/repository/github/jorgensd/adios4dolfinx", "api_url": "https://rseng.github.io/software/api/repos/github/jorgensd/adios4dolfinx"}, {"uid": "github/CobayaSampler/cobaya", "html_url": "https://rseng.github.io/software/repository/github/CobayaSampler/cobaya", "api_url": "https://rseng.github.io/software/api/repos/github/CobayaSampler/cobaya"}, {"uid": "github/SchmidtDSE/afscgap", "html_url": "https://rseng.github.io/software/repository/github/SchmidtDSE/afscgap", "api_url": "https://rseng.github.io/software/api/repos/github/SchmidtDSE/afscgap"}, {"uid": "github/mikegrudic/MakeCloud", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/MakeCloud", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/MakeCloud"}, {"uid": "github/mikegrudic/pytreegrav", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/pytreegrav", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/pytreegrav"}, {"uid": "github/tronsgaard/barycorr", "html_url": "https://rseng.github.io/software/repository/github/tronsgaard/barycorr", "api_url": "https://rseng.github.io/software/api/repos/github/tronsgaard/barycorr"}, {"uid": "github/dmnfarrell/epitopepredict", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/epitopepredict", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/epitopepredict"}, {"uid": "github/dmnfarrell/snpgenie", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/snpgenie", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/snpgenie"}, {"uid": "github/mikesmitka/truvot", "html_url": "https://rseng.github.io/software/repository/github/mikesmitka/truvot", "api_url": "https://rseng.github.io/software/api/repos/github/mikesmitka/truvot"}, {"uid": "github/griffithlab/regtools", "html_url": "https://rseng.github.io/software/repository/github/griffithlab/regtools", "api_url": "https://rseng.github.io/software/api/repos/github/griffithlab/regtools"}, {"uid": "github/cholla-hydro/cholla", "html_url": "https://rseng.github.io/software/repository/github/cholla-hydro/cholla", "api_url": "https://rseng.github.io/software/api/repos/github/cholla-hydro/cholla"}, {"uid": "github/rabix/cwl-format", "html_url": "https://rseng.github.io/software/repository/github/rabix/cwl-format", "api_url": "https://rseng.github.io/software/api/repos/github/rabix/cwl-format"}, {"uid": "github/bmoster/emerge", "html_url": "https://rseng.github.io/software/repository/github/bmoster/emerge", "api_url": "https://rseng.github.io/software/api/repos/github/bmoster/emerge"}, {"uid": "github/astromer-science/main-code", "html_url": "https://rseng.github.io/software/repository/github/astromer-science/main-code", "api_url": "https://rseng.github.io/software/api/repos/github/astromer-science/main-code"}, {"uid": "github/DavidRConnell/matlab-igraph", "html_url": "https://rseng.github.io/software/repository/github/DavidRConnell/matlab-igraph", "api_url": "https://rseng.github.io/software/api/repos/github/DavidRConnell/matlab-igraph"}, {"uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "html_url": "https://rseng.github.io/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "api_url": "https://rseng.github.io/software/api/repos/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset"}, {"uid": "github/U-Alberta/ADaPT-ML", "html_url": "https://rseng.github.io/software/repository/github/U-Alberta/ADaPT-ML", "api_url": "https://rseng.github.io/software/api/repos/github/U-Alberta/ADaPT-ML"}, {"uid": "github/jkluter/MLG", "html_url": "https://rseng.github.io/software/repository/github/jkluter/MLG", "api_url": "https://rseng.github.io/software/api/repos/github/jkluter/MLG"}, {"uid": "github/richford/groupyr", "html_url": "https://rseng.github.io/software/repository/github/richford/groupyr", "api_url": "https://rseng.github.io/software/api/repos/github/richford/groupyr"}, {"uid": "github/marschall-lab/panacus", "html_url": "https://rseng.github.io/software/repository/github/marschall-lab/panacus", "api_url": "https://rseng.github.io/software/api/repos/github/marschall-lab/panacus"}, {"uid": "github/assume-framework/assume", "html_url": "https://rseng.github.io/software/repository/github/assume-framework/assume", "api_url": "https://rseng.github.io/software/api/repos/github/assume-framework/assume"}, {"uid": "github/rambaut/jebl2", "html_url": "https://rseng.github.io/software/repository/github/rambaut/jebl2", "api_url": "https://rseng.github.io/software/api/repos/github/rambaut/jebl2"}, {"uid": "github/davidharvey1986/pyRRG", "html_url": "https://rseng.github.io/software/repository/github/davidharvey1986/pyRRG", "api_url": "https://rseng.github.io/software/api/repos/github/davidharvey1986/pyRRG"}, {"uid": "github/aberer/RogueNaRok", "html_url": "https://rseng.github.io/software/repository/github/aberer/RogueNaRok", "api_url": "https://rseng.github.io/software/api/repos/github/aberer/RogueNaRok"}, {"uid": "github/portsmouth/cmbview", "html_url": "https://rseng.github.io/software/repository/github/portsmouth/cmbview", "api_url": "https://rseng.github.io/software/api/repos/github/portsmouth/cmbview"}, {"uid": "github/WaterFutures/EPyT-Flow", "html_url": "https://rseng.github.io/software/repository/github/WaterFutures/EPyT-Flow", "api_url": "https://rseng.github.io/software/api/repos/github/WaterFutures/EPyT-Flow"}, {"uid": "github/koszullab/pareidolia", "html_url": "https://rseng.github.io/software/repository/github/koszullab/pareidolia", "api_url": "https://rseng.github.io/software/api/repos/github/koszullab/pareidolia"}, {"uid": "github/yuhuan-wu/mobilesal", "html_url": "https://rseng.github.io/software/repository/github/yuhuan-wu/mobilesal", "api_url": "https://rseng.github.io/software/api/repos/github/yuhuan-wu/mobilesal"}, {"uid": "github/PacificBiosciences/FALCON", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/FALCON", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/FALCON"}, {"uid": "github/PacificBiosciences/blasr", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/blasr"}, {"uid": "github/PacificBiosciences/pbbam", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbam", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbam"}, {"uid": "github/PacificBiosciences/pbbioconda", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbioconda", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbioconda"}, {"uid": "github/PacificBiosciences/HiPhase", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/HiPhase", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/HiPhase"}, {"uid": "github/PacificBiosciences/kineticsTools", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/kineticsTools", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/kineticsTools"}, {"uid": "github/PacificBiosciences/pbcopper", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcopper", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcopper"}, {"uid": "github/PacificBiosciences/minorseq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/minorseq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/minorseq"}, {"uid": "github/PacificBiosciences/IsoSeq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/IsoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/IsoSeq"}, {"uid": "github/PacificBiosciences/pbalign", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbalign", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbalign"}, {"uid": "github/PacificBiosciences/pbcore", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcore", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcore"}, {"uid": "github/PacificBiosciences/pbmm2", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbmm2", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbmm2"}, {"uid": "github/SPARC-FAIR-Codeathon/aqua", "html_url": "https://rseng.github.io/software/repository/github/SPARC-FAIR-Codeathon/aqua", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-FAIR-Codeathon/aqua"}, {"uid": "github/Cristianetaniguti/Reads2Map", "html_url": "https://rseng.github.io/software/repository/github/Cristianetaniguti/Reads2Map", "api_url": "https://rseng.github.io/software/api/repos/github/Cristianetaniguti/Reads2Map"}, {"uid": "github/AlmaasLab/csdR", "html_url": "https://rseng.github.io/software/repository/github/AlmaasLab/csdR", "api_url": "https://rseng.github.io/software/api/repos/github/AlmaasLab/csdR"}, {"uid": "github/NumericalMathematics/PositiveIntegrators.jl", "html_url": "https://rseng.github.io/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/NumericalMathematics/PositiveIntegrators.jl"}, {"uid": "github/labxscut/ksak", "html_url": "https://rseng.github.io/software/repository/github/labxscut/ksak", "api_url": "https://rseng.github.io/software/api/repos/github/labxscut/ksak"}, {"uid": "github/demorest/nanopipe", "html_url": "https://rseng.github.io/software/repository/github/demorest/nanopipe", "api_url": "https://rseng.github.io/software/api/repos/github/demorest/nanopipe"}, {"uid": "github/rkingsbury/pyEQL", "html_url": "https://rseng.github.io/software/repository/github/rkingsbury/pyEQL", "api_url": "https://rseng.github.io/software/api/repos/github/rkingsbury/pyEQL"}, {"uid": "github/jepegit/cellpy", "html_url": "https://rseng.github.io/software/repository/github/jepegit/cellpy", "api_url": "https://rseng.github.io/software/api/repos/github/jepegit/cellpy"}, {"uid": "github/MichaelAbdul-Masih/SPAMMS", "html_url": "https://rseng.github.io/software/repository/github/MichaelAbdul-Masih/SPAMMS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelAbdul-Masih/SPAMMS"}, {"uid": "github/pmeier/pystiche", "html_url": "https://rseng.github.io/software/repository/github/pmeier/pystiche", "api_url": "https://rseng.github.io/software/api/repos/github/pmeier/pystiche"}, {"uid": "github/qboxcode/qbox-public", "html_url": "https://rseng.github.io/software/repository/github/qboxcode/qbox-public", "api_url": "https://rseng.github.io/software/api/repos/github/qboxcode/qbox-public"}, {"uid": "github/fraserw/TRIPPy", "html_url": "https://rseng.github.io/software/repository/github/fraserw/TRIPPy", "api_url": "https://rseng.github.io/software/api/repos/github/fraserw/TRIPPy"}, {"uid": "github/vicruiser/3Dmapper", "html_url": "https://rseng.github.io/software/repository/github/vicruiser/3Dmapper", "api_url": "https://rseng.github.io/software/api/repos/github/vicruiser/3Dmapper"}, {"uid": "github/davidaknowles/leafcutter", "html_url": "https://rseng.github.io/software/repository/github/davidaknowles/leafcutter", "api_url": "https://rseng.github.io/software/api/repos/github/davidaknowles/leafcutter"}, {"uid": "github/samuelyeewl/specmatch-emp", "html_url": "https://rseng.github.io/software/repository/github/samuelyeewl/specmatch-emp", "api_url": "https://rseng.github.io/software/api/repos/github/samuelyeewl/specmatch-emp"}, {"uid": "github/DLTK/DLTK", "html_url": "https://rseng.github.io/software/repository/github/DLTK/DLTK", "api_url": "https://rseng.github.io/software/api/repos/github/DLTK/DLTK"}, {"uid": "github/xiaochuanle/MECAT2", "html_url": "https://rseng.github.io/software/repository/github/xiaochuanle/MECAT2", "api_url": "https://rseng.github.io/software/api/repos/github/xiaochuanle/MECAT2"}, {"uid": "github/BattModels/asimtools", "html_url": "https://rseng.github.io/software/repository/github/BattModels/asimtools", "api_url": "https://rseng.github.io/software/api/repos/github/BattModels/asimtools"}, {"uid": "github/Kambrian/HBTplus", "html_url": "https://rseng.github.io/software/repository/github/Kambrian/HBTplus", "api_url": "https://rseng.github.io/software/api/repos/github/Kambrian/HBTplus"}, {"uid": "github/reneshbedre/bioinfokit", "html_url": "https://rseng.github.io/software/repository/github/reneshbedre/bioinfokit", "api_url": "https://rseng.github.io/software/api/repos/github/reneshbedre/bioinfokit"}, {"uid": "github/openmopac/MOPAC", "html_url": "https://rseng.github.io/software/repository/github/openmopac/MOPAC", "api_url": "https://rseng.github.io/software/api/repos/github/openmopac/MOPAC"}, {"uid": "github/RenneLab/hybkit", "html_url": "https://rseng.github.io/software/repository/github/RenneLab/hybkit", "api_url": "https://rseng.github.io/software/api/repos/github/RenneLab/hybkit"}, {"uid": "github/cole-trapnell-lab/monocle3", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/monocle3", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/monocle3"}, {"uid": "github/cole-trapnell-lab/cufflinks", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/cufflinks", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/cufflinks"}, {"uid": "github/neuralgraphs/diman", "html_url": "https://rseng.github.io/software/repository/github/neuralgraphs/diman", "api_url": "https://rseng.github.io/software/api/repos/github/neuralgraphs/diman"}, {"uid": "github/JLSteenwyk/ggpubfigs", "html_url": "https://rseng.github.io/software/repository/github/JLSteenwyk/ggpubfigs", "api_url": "https://rseng.github.io/software/api/repos/github/JLSteenwyk/ggpubfigs"}, {"uid": "github/JacobBumgarner/VesselVio", "html_url": "https://rseng.github.io/software/repository/github/JacobBumgarner/VesselVio", "api_url": "https://rseng.github.io/software/api/repos/github/JacobBumgarner/VesselVio"}, {"uid": "github/nanakiksc/zerone", "html_url": "https://rseng.github.io/software/repository/github/nanakiksc/zerone", "api_url": "https://rseng.github.io/software/api/repos/github/nanakiksc/zerone"}, {"uid": "github/CollinErickson/GauPro", "html_url": "https://rseng.github.io/software/repository/github/CollinErickson/GauPro", "api_url": "https://rseng.github.io/software/api/repos/github/CollinErickson/GauPro"}, {"uid": "github/Goobley/Radynversion", "html_url": "https://rseng.github.io/software/repository/github/Goobley/Radynversion", "api_url": "https://rseng.github.io/software/api/repos/github/Goobley/Radynversion"}, {"uid": "github/tcassanelli/pywpf", "html_url": "https://rseng.github.io/software/repository/github/tcassanelli/pywpf", "api_url": "https://rseng.github.io/software/api/repos/github/tcassanelli/pywpf"}, {"uid": "github/manulera/OpenCloning_frontend", "html_url": "https://rseng.github.io/software/repository/github/manulera/OpenCloning_frontend", "api_url": "https://rseng.github.io/software/api/repos/github/manulera/OpenCloning_frontend"}, {"uid": "github/ngltr/sinaps", "html_url": "https://rseng.github.io/software/repository/github/ngltr/sinaps", "api_url": "https://rseng.github.io/software/api/repos/github/ngltr/sinaps"}, {"uid": "github/lucadimascolo/socca", "html_url": "https://rseng.github.io/software/repository/github/lucadimascolo/socca", "api_url": "https://rseng.github.io/software/api/repos/github/lucadimascolo/socca"}, {"uid": "github/hugoledoux/startinpy", "html_url": "https://rseng.github.io/software/repository/github/hugoledoux/startinpy", "api_url": "https://rseng.github.io/software/api/repos/github/hugoledoux/startinpy"}, {"uid": "github/dpryan79/libBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/libBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/libBigWig"}, {"uid": "github/dpryan79/MethylDackel", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/MethylDackel", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/MethylDackel"}, {"uid": "github/dpryan79/pyBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/pyBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/pyBigWig"}, {"uid": "github/kiyo-masui/bitshuffle", "html_url": "https://rseng.github.io/software/repository/github/kiyo-masui/bitshuffle", "api_url": "https://rseng.github.io/software/api/repos/github/kiyo-masui/bitshuffle"}, {"uid": "github/sklasfeld/DANPOS3", "html_url": "https://rseng.github.io/software/repository/github/sklasfeld/DANPOS3", "api_url": "https://rseng.github.io/software/api/repos/github/sklasfeld/DANPOS3"}, {"uid": "github/yuliadm/mixComp", "html_url": "https://rseng.github.io/software/repository/github/yuliadm/mixComp", "api_url": "https://rseng.github.io/software/api/repos/github/yuliadm/mixComp"}, {"uid": "github/gavinsimpson/gratia", "html_url": "https://rseng.github.io/software/repository/github/gavinsimpson/gratia", "api_url": "https://rseng.github.io/software/api/repos/github/gavinsimpson/gratia"}, {"uid": "github/Rformassspectrometry/Spectra", "html_url": "https://rseng.github.io/software/repository/github/Rformassspectrometry/Spectra", "api_url": "https://rseng.github.io/software/api/repos/github/Rformassspectrometry/Spectra"}, {"uid": "github/aspuru-guzik-group/funsies", "html_url": "https://rseng.github.io/software/repository/github/aspuru-guzik-group/funsies", "api_url": "https://rseng.github.io/software/api/repos/github/aspuru-guzik-group/funsies"}, {"uid": "github/sncosmo/sncosmo", "html_url": "https://rseng.github.io/software/repository/github/sncosmo/sncosmo", "api_url": "https://rseng.github.io/software/api/repos/github/sncosmo/sncosmo"}, {"uid": "github/leirufeng/iEnhancer-DCSV", "html_url": "https://rseng.github.io/software/repository/github/leirufeng/iEnhancer-DCSV", "api_url": "https://rseng.github.io/software/api/repos/github/leirufeng/iEnhancer-DCSV"}, {"uid": "github/liniguez/Insplico_simulations", "html_url": "https://rseng.github.io/software/repository/github/liniguez/Insplico_simulations", "api_url": "https://rseng.github.io/software/api/repos/github/liniguez/Insplico_simulations"}, {"uid": "github/teoxxx/nemiss_pbl", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_pbl", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_pbl"}, {"uid": "github/teoxxx/nemiss_proper", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_proper", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_proper"}, {"uid": "github/teoxxx/rlos", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/rlos", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/rlos"}, {"uid": "github/agree019/DarkCapPy", "html_url": "https://rseng.github.io/software/repository/github/agree019/DarkCapPy", "api_url": "https://rseng.github.io/software/api/repos/github/agree019/DarkCapPy"}, {"uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeodynamics/GeophysicalModelGenerator.jl"}, {"uid": "github/tseemann/abricate", "html_url": "https://rseng.github.io/software/repository/github/tseemann/abricate", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/abricate"}, {"uid": "github/tseemann/VelvetOptimiser", "html_url": "https://rseng.github.io/software/repository/github/tseemann/VelvetOptimiser", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/VelvetOptimiser"}, {"uid": "github/tseemann/shovill", "html_url": "https://rseng.github.io/software/repository/github/tseemann/shovill", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/shovill"}, {"uid": "github/tseemann/mlst", "html_url": "https://rseng.github.io/software/repository/github/tseemann/mlst", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/mlst"}, {"uid": "github/tseemann/snippy", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snippy", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snippy"}, {"uid": "github/tseemann/prokka", "html_url": "https://rseng.github.io/software/repository/github/tseemann/prokka", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/prokka"}, {"uid": "github/tseemann/barrnap", "html_url": "https://rseng.github.io/software/repository/github/tseemann/barrnap", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/barrnap"}, {"uid": "github/tseemann/samclip", "html_url": "https://rseng.github.io/software/repository/github/tseemann/samclip", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/samclip"}, {"uid": "github/tseemann/snp-dists", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snp-dists", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snp-dists"}, {"uid": "github/cosmicrays/hermes", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/hermes", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/hermes"}, {"uid": "github/cosmicrays/DRAGON", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/DRAGON", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/DRAGON"}, {"uid": "github/kehrlab/PopDel", "html_url": "https://rseng.github.io/software/repository/github/kehrlab/PopDel", "api_url": "https://rseng.github.io/software/api/repos/github/kehrlab/PopDel"}, {"uid": "github/timahutchinson/redmonster", "html_url": "https://rseng.github.io/software/repository/github/timahutchinson/redmonster", "api_url": "https://rseng.github.io/software/api/repos/github/timahutchinson/redmonster"}, {"uid": "github/jgieseler/solarmach", "html_url": "https://rseng.github.io/software/repository/github/jgieseler/solarmach", "api_url": "https://rseng.github.io/software/api/repos/github/jgieseler/solarmach"}, {"uid": "github/brian-lau/MatlabAUC", "html_url": "https://rseng.github.io/software/repository/github/brian-lau/MatlabAUC", "api_url": "https://rseng.github.io/software/api/repos/github/brian-lau/MatlabAUC"}, {"uid": "github/Exo-TiC/ExoTiC-LD", "html_url": "https://rseng.github.io/software/repository/github/Exo-TiC/ExoTiC-LD", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-TiC/ExoTiC-LD"}, {"uid": "github/ranieremenezes/easyspec", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyspec", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyspec"}, {"uid": "github/ranieremenezes/easyFermi", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyFermi", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyFermi"}, {"uid": "github/franpoz/SHERLOCK", "html_url": "https://rseng.github.io/software/repository/github/franpoz/SHERLOCK", "api_url": "https://rseng.github.io/software/api/repos/github/franpoz/SHERLOCK"}, {"uid": "github/callendeprieto/ferre", "html_url": "https://rseng.github.io/software/repository/github/callendeprieto/ferre", "api_url": "https://rseng.github.io/software/api/repos/github/callendeprieto/ferre"}, {"uid": "github/zhwm/SparsePro_Paper", "html_url": "https://rseng.github.io/software/repository/github/zhwm/SparsePro_Paper", "api_url": "https://rseng.github.io/software/api/repos/github/zhwm/SparsePro_Paper"}, {"uid": "github/pasteurlabs/tesseract-core", "html_url": "https://rseng.github.io/software/repository/github/pasteurlabs/tesseract-core", "api_url": "https://rseng.github.io/software/api/repos/github/pasteurlabs/tesseract-core"}, {"uid": "github/MintonGroup/swiftest", "html_url": "https://rseng.github.io/software/repository/github/MintonGroup/swiftest", "api_url": "https://rseng.github.io/software/api/repos/github/MintonGroup/swiftest"}, {"uid": "github/alessiospuriomancini/cosmopower", "html_url": "https://rseng.github.io/software/repository/github/alessiospuriomancini/cosmopower", "api_url": "https://rseng.github.io/software/api/repos/github/alessiospuriomancini/cosmopower"}, {"uid": "github/IanevskiAleksandr/sc-type", "html_url": "https://rseng.github.io/software/repository/github/IanevskiAleksandr/sc-type", "api_url": "https://rseng.github.io/software/api/repos/github/IanevskiAleksandr/sc-type"}, {"uid": "github/LuShenJ/PyEMILI", "html_url": "https://rseng.github.io/software/repository/github/LuShenJ/PyEMILI", "api_url": "https://rseng.github.io/software/api/repos/github/LuShenJ/PyEMILI"}, {"uid": "github/mdolab/pygeo", "html_url": "https://rseng.github.io/software/repository/github/mdolab/pygeo", "api_url": "https://rseng.github.io/software/api/repos/github/mdolab/pygeo"}, {"uid": "github/WatsonGroupTCD/J2suscep", "html_url": "https://rseng.github.io/software/repository/github/WatsonGroupTCD/J2suscep", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonGroupTCD/J2suscep"}, {"uid": "github/ruta-k/uGMRT-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ruta-k/uGMRT-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ruta-k/uGMRT-pipeline"}, {"uid": "github/sheydenreich/threepoint", "html_url": "https://rseng.github.io/software/repository/github/sheydenreich/threepoint", "api_url": "https://rseng.github.io/software/api/repos/github/sheydenreich/threepoint"}, {"uid": "github/benallard/galileo", "html_url": "https://rseng.github.io/software/repository/github/benallard/galileo", "api_url": "https://rseng.github.io/software/api/repos/github/benallard/galileo"}, {"uid": "github/carnival-data/carnival", "html_url": "https://rseng.github.io/software/repository/github/carnival-data/carnival", "api_url": "https://rseng.github.io/software/api/repos/github/carnival-data/carnival"}, {"uid": "github/HCGB-IGTP/spaTyper", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/spaTyper", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/spaTyper"}, {"uid": "github/HCGB-IGTP/XICRA", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/XICRA", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/XICRA"}, {"uid": "github/delphes/delphes", "html_url": "https://rseng.github.io/software/repository/github/delphes/delphes", "api_url": "https://rseng.github.io/software/api/repos/github/delphes/delphes"}, {"uid": "github/JohannesBuchner/PyMultiNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/PyMultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/PyMultiNest"}, {"uid": "github/JohannesBuchner/nway", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/nway", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/nway"}, {"uid": "github/JohannesBuchner/BXA", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/BXA", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/BXA"}, {"uid": "github/JohannesBuchner/UltraNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/UltraNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/UltraNest"}, {"uid": "github/agnetelundgaard/BALDR", "html_url": "https://rseng.github.io/software/repository/github/agnetelundgaard/BALDR", "api_url": "https://rseng.github.io/software/api/repos/github/agnetelundgaard/BALDR"}, {"uid": "github/tyo-nu/pickaxe_paper", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/pickaxe_paper", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/pickaxe_paper"}, {"uid": "github/tyo-nu/MINE-app", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/MINE-app", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/MINE-app"}, {"uid": "github/mirochaj/sedop", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/sedop", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/sedop"}, {"uid": "github/mirochaj/ares", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/ares", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/ares"}, {"uid": "github/morispi/LRez", "html_url": "https://rseng.github.io/software/repository/github/morispi/LRez", "api_url": "https://rseng.github.io/software/api/repos/github/morispi/LRez"}, {"uid": "github/vhaasteren/piccard", "html_url": "https://rseng.github.io/software/repository/github/vhaasteren/piccard", "api_url": "https://rseng.github.io/software/api/repos/github/vhaasteren/piccard"}, {"uid": "github/lmfit/lmfit-py", "html_url": "https://rseng.github.io/software/repository/github/lmfit/lmfit-py", "api_url": "https://rseng.github.io/software/api/repos/github/lmfit/lmfit-py"}, {"uid": "github/younglab/origami", "html_url": "https://rseng.github.io/software/repository/github/younglab/origami", "api_url": "https://rseng.github.io/software/api/repos/github/younglab/origami"}, {"uid": "github/csmsoftware/IMPaCTS", "html_url": "https://rseng.github.io/software/repository/github/csmsoftware/IMPaCTS", "api_url": "https://rseng.github.io/software/api/repos/github/csmsoftware/IMPaCTS"}, {"uid": "github/DiseaseTranscriptomicsLab/scStudio", "html_url": "https://rseng.github.io/software/repository/github/DiseaseTranscriptomicsLab/scStudio", "api_url": "https://rseng.github.io/software/api/repos/github/DiseaseTranscriptomicsLab/scStudio"}, {"uid": "github/D-Crake/HEADSS", "html_url": "https://rseng.github.io/software/repository/github/D-Crake/HEADSS", "api_url": "https://rseng.github.io/software/api/repos/github/D-Crake/HEADSS"}, {"uid": "github/cblearn/cblearn", "html_url": "https://rseng.github.io/software/repository/github/cblearn/cblearn", "api_url": "https://rseng.github.io/software/api/repos/github/cblearn/cblearn"}, {"uid": "github/tpospisi/cdetools", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/cdetools", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/cdetools"}, {"uid": "github/tpospisi/nnkcde", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/nnkcde", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/nnkcde"}, {"uid": "github/tpospisi/RFCDE", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/RFCDE", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/RFCDE"}, {"uid": "github/sczesla/PyAstronomy", "html_url": "https://rseng.github.io/software/repository/github/sczesla/PyAstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sczesla/PyAstronomy"}, {"uid": "github/datalad/datalad", "html_url": "https://rseng.github.io/software/repository/github/datalad/datalad", "api_url": "https://rseng.github.io/software/api/repos/github/datalad/datalad"}, {"uid": "github/CAMI-challenge/AMBER", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/AMBER"}, {"uid": "github/CAMI-challenge/CAMITAX", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/CAMITAX", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/CAMITAX"}, {"uid": "github/MLMI2-CSSI/foundry", "html_url": "https://rseng.github.io/software/repository/github/MLMI2-CSSI/foundry", "api_url": "https://rseng.github.io/software/api/repos/github/MLMI2-CSSI/foundry"}, {"uid": "github/ImperialCollegeLondon/fractalgenetics", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/fractalgenetics", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/fractalgenetics"}, {"uid": "github/ImperialCollegeLondon/magda_tools", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/magda_tools", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/magda_tools"}, {"uid": "github/ImperialCollegeLondon/hcga", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/hcga", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/hcga"}, {"uid": "github/ImperialCollegeLondon/champ", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/champ", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/champ"}, {"uid": "github/ImperialCollegeLondon/rcs-pacemakers", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs-pacemakers"}, {"uid": "github/ImperialCollegeLondon/covid19model", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/covid19model", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/covid19model"}, {"uid": "github/ImperialCollegeLondon/ICLOCS", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/ICLOCS", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/ICLOCS"}, {"uid": "github/ImperialCollegeLondon/sharpy", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sharpy", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sharpy"}, {"uid": "github/ImperialCollegeLondon/SWMManywhere", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/SWMManywhere", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/SWMManywhere"}, {"uid": "github/ImperialCollegeLondon/safedata", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/safedata", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/safedata"}, {"uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs_cluster_scripts"}, {"uid": "github/ImperialCollegeLondon/WInc3D", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/WInc3D", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/WInc3D"}, {"uid": "github/ImperialCollegeLondon/UVLM", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/UVLM", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/UVLM"}, {"uid": "github/ImperialCollegeLondon/pytest_template_application", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/pytest_template_application", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/pytest_template_application"}, {"uid": "github/ImperialCollegeLondon/sap-voicebox", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sap-voicebox", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sap-voicebox"}, {"uid": "github/ImperialCollegeLondon/EpiCollectplus", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/EpiCollectplus", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/EpiCollectplus"}, {"uid": "github/ImperialCollegeLondon/django-drf-filepond", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/django-drf-filepond", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/django-drf-filepond"}, {"uid": "github/ImperialCollegeLondon/PyProBE", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/PyProBE", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/PyProBE"}, {"uid": "github/ImperialCollegeLondon/research-software-directory-data", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/research-software-directory-data", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/research-software-directory-data"}, {"uid": "github/ImperialCollegeLondon/adam", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/adam", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/adam"}, {"uid": "github/ImperialCollegeLondon/R2T2", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/R2T2", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/R2T2"}, {"uid": "github/ImperialCollegeLondon/epidemia", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/epidemia", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/epidemia"}, {"uid": "github/C2SM-RCM/emiproc", "html_url": "https://rseng.github.io/software/repository/github/C2SM-RCM/emiproc", "api_url": "https://rseng.github.io/software/api/repos/github/C2SM-RCM/emiproc"}, {"uid": "github/antwiser/ChemFH", "html_url": "https://rseng.github.io/software/repository/github/antwiser/ChemFH", "api_url": "https://rseng.github.io/software/api/repos/github/antwiser/ChemFH"}, {"uid": "github/rhayes777/PyAutoFit", "html_url": "https://rseng.github.io/software/repository/github/rhayes777/PyAutoFit", "api_url": "https://rseng.github.io/software/api/repos/github/rhayes777/PyAutoFit"}, {"uid": "github/yiwenstat/MCPCA_PopGen", "html_url": "https://rseng.github.io/software/repository/github/yiwenstat/MCPCA_PopGen", "api_url": "https://rseng.github.io/software/api/repos/github/yiwenstat/MCPCA_PopGen"}, {"uid": "github/astromb/PICsar2D", "html_url": "https://rseng.github.io/software/repository/github/astromb/PICsar2D", "api_url": "https://rseng.github.io/software/api/repos/github/astromb/PICsar2D"}, {"uid": "github/wal-yan/target-methylseq-qc", "html_url": "https://rseng.github.io/software/repository/github/wal-yan/target-methylseq-qc", "api_url": "https://rseng.github.io/software/api/repos/github/wal-yan/target-methylseq-qc"}, {"uid": "github/mlafarga/raccoon", "html_url": "https://rseng.github.io/software/repository/github/mlafarga/raccoon", "api_url": "https://rseng.github.io/software/api/repos/github/mlafarga/raccoon"}, {"uid": "github/barnesgroupICL/Driftfusion", "html_url": "https://rseng.github.io/software/repository/github/barnesgroupICL/Driftfusion", "api_url": "https://rseng.github.io/software/api/repos/github/barnesgroupICL/Driftfusion"}, {"uid": "github/reznik-lab/MIRTH", "html_url": "https://rseng.github.io/software/repository/github/reznik-lab/MIRTH", "api_url": "https://rseng.github.io/software/api/repos/github/reznik-lab/MIRTH"}, {"uid": "github/roban/CosmoloPy", "html_url": "https://rseng.github.io/software/repository/github/roban/CosmoloPy", "api_url": "https://rseng.github.io/software/api/repos/github/roban/CosmoloPy"}, {"uid": "github/soilwater/crnpy", "html_url": "https://rseng.github.io/software/repository/github/soilwater/crnpy", "api_url": "https://rseng.github.io/software/api/repos/github/soilwater/crnpy"}, {"uid": "github/DZeevi-Lab/TinkerHap", "html_url": "https://rseng.github.io/software/repository/github/DZeevi-Lab/TinkerHap", "api_url": "https://rseng.github.io/software/api/repos/github/DZeevi-Lab/TinkerHap"}, {"uid": "github/nugent-lab/FindPOTATOS-stable", "html_url": "https://rseng.github.io/software/repository/github/nugent-lab/FindPOTATOS-stable", "api_url": "https://rseng.github.io/software/api/repos/github/nugent-lab/FindPOTATOS-stable"}, {"uid": "github/BigDataBiology/argNorm", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/argNorm", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/argNorm"}, {"uid": "github/BigDataBiology/macrel", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/macrel", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/macrel"}, {"uid": "github/jaimerzp/limberjack.jl", "html_url": "https://rseng.github.io/software/repository/github/jaimerzp/limberjack.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jaimerzp/limberjack.jl"}, {"uid": "github/jlenain/flaapluc", "html_url": "https://rseng.github.io/software/repository/github/jlenain/flaapluc", "api_url": "https://rseng.github.io/software/api/repos/github/jlenain/flaapluc"}, {"uid": "github/jolie/tquery", "html_url": "https://rseng.github.io/software/repository/github/jolie/tquery", "api_url": "https://rseng.github.io/software/api/repos/github/jolie/tquery"}, {"uid": "github/AshleySpindler/AstroVaDEr-Public", "html_url": "https://rseng.github.io/software/repository/github/AshleySpindler/AstroVaDEr-Public", "api_url": "https://rseng.github.io/software/api/repos/github/AshleySpindler/AstroVaDEr-Public"}, {"uid": "github/semaphoreP/whereistheplanet", "html_url": "https://rseng.github.io/software/repository/github/semaphoreP/whereistheplanet", "api_url": "https://rseng.github.io/software/api/repos/github/semaphoreP/whereistheplanet"}, {"uid": "github/rgcgithub/regenie", "html_url": "https://rseng.github.io/software/repository/github/rgcgithub/regenie", "api_url": "https://rseng.github.io/software/api/repos/github/rgcgithub/regenie"}, {"uid": "github/astrosupriyo/pyTANSPEC", "html_url": "https://rseng.github.io/software/repository/github/astrosupriyo/pyTANSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/astrosupriyo/pyTANSPEC"}, {"uid": "github/amberbiology/scribl", "html_url": "https://rseng.github.io/software/repository/github/amberbiology/scribl", "api_url": "https://rseng.github.io/software/api/repos/github/amberbiology/scribl"}, {"uid": "github/taehoryu/TDEmass", "html_url": "https://rseng.github.io/software/repository/github/taehoryu/TDEmass", "api_url": "https://rseng.github.io/software/api/repos/github/taehoryu/TDEmass"}, {"uid": "github/e-merlin/eMERLIN_CASA_pipeline", "html_url": "https://rseng.github.io/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/e-merlin/eMERLIN_CASA_pipeline"}, {"uid": "github/bedops/bedops", "html_url": "https://rseng.github.io/software/repository/github/bedops/bedops", "api_url": "https://rseng.github.io/software/api/repos/github/bedops/bedops"}, {"uid": "github/kimpenn/VERSE", "html_url": "https://rseng.github.io/software/repository/github/kimpenn/VERSE", "api_url": "https://rseng.github.io/software/api/repos/github/kimpenn/VERSE"}, {"uid": "github/SebOliver/PCA", "html_url": "https://rseng.github.io/software/repository/github/SebOliver/PCA", "api_url": "https://rseng.github.io/software/api/repos/github/SebOliver/PCA"}, {"uid": "github/GalacticDynamics/unxt", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics/unxt", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics/unxt"}, {"uid": "github/HaowenZhang/TRINITY", "html_url": "https://rseng.github.io/software/repository/github/HaowenZhang/TRINITY", "api_url": "https://rseng.github.io/software/api/repos/github/HaowenZhang/TRINITY"}, {"uid": "github/barnabytprowe/imcom", "html_url": "https://rseng.github.io/software/repository/github/barnabytprowe/imcom", "api_url": "https://rseng.github.io/software/api/repos/github/barnabytprowe/imcom"}, {"uid": "github/inigozubeldia/cosmocnc", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/cosmocnc", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/cosmocnc"}, {"uid": "github/inigozubeldia/szifi", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/szifi", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/szifi"}, {"uid": "github/dynamics-of-stellar-systems/dynamite_release", "html_url": "https://rseng.github.io/software/repository/github/dynamics-of-stellar-systems/dynamite_release", "api_url": "https://rseng.github.io/software/api/repos/github/dynamics-of-stellar-systems/dynamite_release"}, {"uid": "github/bwkeller/PASTA", "html_url": "https://rseng.github.io/software/repository/github/bwkeller/PASTA", "api_url": "https://rseng.github.io/software/api/repos/github/bwkeller/PASTA"}, {"uid": "github/jupyter/notebook", "html_url": "https://rseng.github.io/software/repository/github/jupyter/notebook", "api_url": "https://rseng.github.io/software/api/repos/github/jupyter/notebook"}, {"uid": "github/maxpumperla/hyperas", "html_url": "https://rseng.github.io/software/repository/github/maxpumperla/hyperas", "api_url": "https://rseng.github.io/software/api/repos/github/maxpumperla/hyperas"}, {"uid": "github/ryanhausen/fitsmap", "html_url": "https://rseng.github.io/software/repository/github/ryanhausen/fitsmap", "api_url": "https://rseng.github.io/software/api/repos/github/ryanhausen/fitsmap"}, {"uid": "github/GregoryFaust/samblaster", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/samblaster", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/samblaster"}, {"uid": "github/GregoryFaust/yaha", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/yaha", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/yaha"}, {"uid": "github/daddeptr/Needlets", "html_url": "https://rseng.github.io/software/repository/github/daddeptr/Needlets", "api_url": "https://rseng.github.io/software/api/repos/github/daddeptr/Needlets"}, {"uid": "github/MFaymon/spINAR", "html_url": "https://rseng.github.io/software/repository/github/MFaymon/spINAR", "api_url": "https://rseng.github.io/software/api/repos/github/MFaymon/spINAR"}, {"uid": "github/lasseignelab/CINmetrics", "html_url": "https://rseng.github.io/software/repository/github/lasseignelab/CINmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/lasseignelab/CINmetrics"}, {"uid": "github/ThomasBakx/cobra", "html_url": "https://rseng.github.io/software/repository/github/ThomasBakx/cobra", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasBakx/cobra"}, {"uid": "github/jlillo/tpfplotter", "html_url": "https://rseng.github.io/software/repository/github/jlillo/tpfplotter", "api_url": "https://rseng.github.io/software/api/repos/github/jlillo/tpfplotter"}, {"uid": "github/wcxve/elisa", "html_url": "https://rseng.github.io/software/repository/github/wcxve/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/wcxve/elisa"}, {"uid": "github/coleygroup/pyscreener", "html_url": "https://rseng.github.io/software/repository/github/coleygroup/pyscreener", "api_url": "https://rseng.github.io/software/api/repos/github/coleygroup/pyscreener"}, {"uid": "github/alexriss/SpmImageTycoon.jl", "html_url": "https://rseng.github.io/software/repository/github/alexriss/SpmImageTycoon.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alexriss/SpmImageTycoon.jl"}, {"uid": "github/nservant/HiC-Pro", "html_url": "https://rseng.github.io/software/repository/github/nservant/HiC-Pro", "api_url": "https://rseng.github.io/software/api/repos/github/nservant/HiC-Pro"}, {"uid": "github/weizhongli/cdhit", "html_url": "https://rseng.github.io/software/repository/github/weizhongli/cdhit", "api_url": "https://rseng.github.io/software/api/repos/github/weizhongli/cdhit"}, {"uid": "github/KostasValeckas/PyLongslit", "html_url": "https://rseng.github.io/software/repository/github/KostasValeckas/PyLongslit", "api_url": "https://rseng.github.io/software/api/repos/github/KostasValeckas/PyLongslit"}, {"uid": "github/Peppags/CNN-SVR", "html_url": "https://rseng.github.io/software/repository/github/Peppags/CNN-SVR", "api_url": "https://rseng.github.io/software/api/repos/github/Peppags/CNN-SVR"}, {"uid": "github/hope-data-science/tidyfst", "html_url": "https://rseng.github.io/software/repository/github/hope-data-science/tidyfst", "api_url": "https://rseng.github.io/software/api/repos/github/hope-data-science/tidyfst"}, {"uid": "github/kellino/DiscreteEntropy.jl", "html_url": "https://rseng.github.io/software/repository/github/kellino/DiscreteEntropy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kellino/DiscreteEntropy.jl"}, {"uid": "github/rzellem/EXOTIC", "html_url": "https://rseng.github.io/software/repository/github/rzellem/EXOTIC", "api_url": "https://rseng.github.io/software/api/repos/github/rzellem/EXOTIC"}, {"uid": "github/AsterLight0626/Twinkle", "html_url": "https://rseng.github.io/software/repository/github/AsterLight0626/Twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/AsterLight0626/Twinkle"}, {"uid": "github/galaxyecology/tools-ecology", "html_url": "https://rseng.github.io/software/repository/github/galaxyecology/tools-ecology", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyecology/tools-ecology"}, {"uid": "github/TBLabFJD/WHALE", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/WHALE", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/WHALE"}, {"uid": "github/TBLabFJD/VariantCallingFJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/VariantCallingFJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/VariantCallingFJD"}, {"uid": "github/TBLabFJD/DBofAFs", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/DBofAFs", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/DBofAFs"}, {"uid": "github/TBLabFJD/PARROT-FJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/PARROT-FJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/PARROT-FJD"}, {"uid": "github/LiberTEM/LiberTEM", "html_url": "https://rseng.github.io/software/repository/github/LiberTEM/LiberTEM", "api_url": "https://rseng.github.io/software/api/repos/github/LiberTEM/LiberTEM"}, {"uid": "github/darrencroton/sage", "html_url": "https://rseng.github.io/software/repository/github/darrencroton/sage", "api_url": "https://rseng.github.io/software/api/repos/github/darrencroton/sage"}, {"uid": "github/moble/GWFrames", "html_url": "https://rseng.github.io/software/repository/github/moble/GWFrames", "api_url": "https://rseng.github.io/software/api/repos/github/moble/GWFrames"}, {"uid": "github/moble/scri", "html_url": "https://rseng.github.io/software/repository/github/moble/scri", "api_url": "https://rseng.github.io/software/api/repos/github/moble/scri"}, {"uid": "github/xdqso/xdqso", "html_url": "https://rseng.github.io/software/repository/github/xdqso/xdqso", "api_url": "https://rseng.github.io/software/api/repos/github/xdqso/xdqso"}, {"uid": "github/koide3/small_gicp", "html_url": "https://rseng.github.io/software/repository/github/koide3/small_gicp", "api_url": "https://rseng.github.io/software/api/repos/github/koide3/small_gicp"}, {"uid": "github/padster/pyNeuroTrace", "html_url": "https://rseng.github.io/software/repository/github/padster/pyNeuroTrace", "api_url": "https://rseng.github.io/software/api/repos/github/padster/pyNeuroTrace"}, {"uid": "github/fhcrc/seqmagick", "html_url": "https://rseng.github.io/software/repository/github/fhcrc/seqmagick", "api_url": "https://rseng.github.io/software/api/repos/github/fhcrc/seqmagick"}, {"uid": "github/swiss-armed-forces/openburst", "html_url": "https://rseng.github.io/software/repository/github/swiss-armed-forces/openburst", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-armed-forces/openburst"}, {"uid": "github/bmvdgeijn/WASP", "html_url": "https://rseng.github.io/software/repository/github/bmvdgeijn/WASP", "api_url": "https://rseng.github.io/software/api/repos/github/bmvdgeijn/WASP"}, {"uid": "github/bramvandijk88/cacatoo", "html_url": "https://rseng.github.io/software/repository/github/bramvandijk88/cacatoo", "api_url": "https://rseng.github.io/software/api/repos/github/bramvandijk88/cacatoo"}, {"uid": "github/hpgem/nanomesh", "html_url": "https://rseng.github.io/software/repository/github/hpgem/nanomesh", "api_url": "https://rseng.github.io/software/api/repos/github/hpgem/nanomesh"}, {"uid": "github/GaetanBenoitDev/metaMDBG", "html_url": "https://rseng.github.io/software/repository/github/GaetanBenoitDev/metaMDBG", "api_url": "https://rseng.github.io/software/api/repos/github/GaetanBenoitDev/metaMDBG"}, {"uid": "github/OSeMOSYS/otoole", "html_url": "https://rseng.github.io/software/repository/github/OSeMOSYS/otoole", "api_url": "https://rseng.github.io/software/api/repos/github/OSeMOSYS/otoole"}, {"uid": "github/vergauwenthomas/MetObs_toolkit", "html_url": "https://rseng.github.io/software/repository/github/vergauwenthomas/MetObs_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/vergauwenthomas/MetObs_toolkit"}, {"uid": "github/plazar/coast_guard", "html_url": "https://rseng.github.io/software/repository/github/plazar/coast_guard", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/coast_guard"}, {"uid": "github/plazar/TOASTER", "html_url": "https://rseng.github.io/software/repository/github/plazar/TOASTER", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/TOASTER"}, {"uid": "github/palaeoware/trevosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/trevosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/trevosim"}, {"uid": "github/palaeoware/revosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/revosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/revosim"}, {"uid": "github/CisnerosResearch/LICHEM", "html_url": "https://rseng.github.io/software/repository/github/CisnerosResearch/LICHEM", "api_url": "https://rseng.github.io/software/api/repos/github/CisnerosResearch/LICHEM"}, {"uid": "github/ACEnglish/truvari", "html_url": "https://rseng.github.io/software/repository/github/ACEnglish/truvari", "api_url": "https://rseng.github.io/software/api/repos/github/ACEnglish/truvari"}, {"uid": "github/SJTU-CGM/ivTerm", "html_url": "https://rseng.github.io/software/repository/github/SJTU-CGM/ivTerm", "api_url": "https://rseng.github.io/software/api/repos/github/SJTU-CGM/ivTerm"}, {"uid": "github/kushaltirumala/WaldoInSky", "html_url": "https://rseng.github.io/software/repository/github/kushaltirumala/WaldoInSky", "api_url": "https://rseng.github.io/software/api/repos/github/kushaltirumala/WaldoInSky"}, {"uid": "github/pkgw/pwkit", "html_url": "https://rseng.github.io/software/repository/github/pkgw/pwkit", "api_url": "https://rseng.github.io/software/api/repos/github/pkgw/pwkit"}, {"uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "html_url": "https://rseng.github.io/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "api_url": "https://rseng.github.io/software/api/repos/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-"}, {"uid": "github/BU-hammerTeam/PyHammer", "html_url": "https://rseng.github.io/software/repository/github/BU-hammerTeam/PyHammer", "api_url": "https://rseng.github.io/software/api/repos/github/BU-hammerTeam/PyHammer"}, {"uid": "github/llt1836/TE-HI-GCN", "html_url": "https://rseng.github.io/software/repository/github/llt1836/TE-HI-GCN", "api_url": "https://rseng.github.io/software/api/repos/github/llt1836/TE-HI-GCN"}, {"uid": "github/SNEWS2/snewpy", "html_url": "https://rseng.github.io/software/repository/github/SNEWS2/snewpy", "api_url": "https://rseng.github.io/software/api/repos/github/SNEWS2/snewpy"}, {"uid": "github/beckrob/Photo-z-SQL", "html_url": "https://rseng.github.io/software/repository/github/beckrob/Photo-z-SQL", "api_url": "https://rseng.github.io/software/api/repos/github/beckrob/Photo-z-SQL"}, {"uid": "github/DKMS/hapl-o-Mat_WinBin", "html_url": "https://rseng.github.io/software/repository/github/DKMS/hapl-o-Mat_WinBin", "api_url": "https://rseng.github.io/software/api/repos/github/DKMS/hapl-o-Mat_WinBin"}, {"uid": "github/febos/SQUARNA", "html_url": "https://rseng.github.io/software/repository/github/febos/SQUARNA", "api_url": "https://rseng.github.io/software/api/repos/github/febos/SQUARNA"}, {"uid": "github/mayuresh159/starsense_algorithms", "html_url": "https://rseng.github.io/software/repository/github/mayuresh159/starsense_algorithms", "api_url": "https://rseng.github.io/software/api/repos/github/mayuresh159/starsense_algorithms"}, {"uid": "github/johannesulf/dsigma", "html_url": "https://rseng.github.io/software/repository/github/johannesulf/dsigma", "api_url": "https://rseng.github.io/software/api/repos/github/johannesulf/dsigma"}, {"uid": "github/tobias-dv-lnu/s4rdm3x", "html_url": "https://rseng.github.io/software/repository/github/tobias-dv-lnu/s4rdm3x", "api_url": "https://rseng.github.io/software/api/repos/github/tobias-dv-lnu/s4rdm3x"}, {"uid": "github/tdrobinson/coronagraph_noise", "html_url": "https://rseng.github.io/software/repository/github/tdrobinson/coronagraph_noise", "api_url": "https://rseng.github.io/software/api/repos/github/tdrobinson/coronagraph_noise"}, {"uid": "github/calboo/Potential_Field_Calculator", "html_url": "https://rseng.github.io/software/repository/github/calboo/Potential_Field_Calculator", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/Potential_Field_Calculator"}, {"uid": "github/calboo/TAWAS", "html_url": "https://rseng.github.io/software/repository/github/calboo/TAWAS", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/TAWAS"}, {"uid": "github/calboo/wigglewave", "html_url": "https://rseng.github.io/software/repository/github/calboo/wigglewave", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/wigglewave"}, {"uid": "github/NCAS-CMS/cfdm", "html_url": "https://rseng.github.io/software/repository/github/NCAS-CMS/cfdm", "api_url": "https://rseng.github.io/software/api/repos/github/NCAS-CMS/cfdm"}, {"uid": "github/popgenmethods/smcpp", "html_url": "https://rseng.github.io/software/repository/github/popgenmethods/smcpp", "api_url": "https://rseng.github.io/software/api/repos/github/popgenmethods/smcpp"}, {"uid": "github/pyBRAvo/pyBRAvo", "html_url": "https://rseng.github.io/software/repository/github/pyBRAvo/pyBRAvo", "api_url": "https://rseng.github.io/software/api/repos/github/pyBRAvo/pyBRAvo"}, {"uid": "github/linuxscout/pyarabic", "html_url": "https://rseng.github.io/software/repository/github/linuxscout/pyarabic", "api_url": "https://rseng.github.io/software/api/repos/github/linuxscout/pyarabic"}, {"uid": "github/gheald/rmclean", "html_url": "https://rseng.github.io/software/repository/github/gheald/rmclean", "api_url": "https://rseng.github.io/software/api/repos/github/gheald/rmclean"}, {"uid": "github/alexander-shen/rtest", "html_url": "https://rseng.github.io/software/repository/github/alexander-shen/rtest", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-shen/rtest"}, {"uid": "github/gadomski/antimeridian", "html_url": "https://rseng.github.io/software/repository/github/gadomski/antimeridian", "api_url": "https://rseng.github.io/software/api/repos/github/gadomski/antimeridian"}, {"uid": "github/ParisAstronomicalDataCentre/OPUS", "html_url": "https://rseng.github.io/software/repository/github/ParisAstronomicalDataCentre/OPUS", "api_url": "https://rseng.github.io/software/api/repos/github/ParisAstronomicalDataCentre/OPUS"}, {"uid": "github/francescodc87/ipaPy2", "html_url": "https://rseng.github.io/software/repository/github/francescodc87/ipaPy2", "api_url": "https://rseng.github.io/software/api/repos/github/francescodc87/ipaPy2"}, {"uid": "github/Johannes-Sahlmann/pygacs", "html_url": "https://rseng.github.io/software/repository/github/Johannes-Sahlmann/pygacs", "api_url": "https://rseng.github.io/software/api/repos/github/Johannes-Sahlmann/pygacs"}, {"uid": "github/jgducoin/galclaim", "html_url": "https://rseng.github.io/software/repository/github/jgducoin/galclaim", "api_url": "https://rseng.github.io/software/api/repos/github/jgducoin/galclaim"}, {"uid": "github/JanCBrammer/biopeaks", "html_url": "https://rseng.github.io/software/repository/github/JanCBrammer/biopeaks", "api_url": "https://rseng.github.io/software/api/repos/github/JanCBrammer/biopeaks"}, {"uid": "github/coljac/sensie", "html_url": "https://rseng.github.io/software/repository/github/coljac/sensie", "api_url": "https://rseng.github.io/software/api/repos/github/coljac/sensie"}, {"uid": "github/nppackages/lpcde", "html_url": "https://rseng.github.io/software/repository/github/nppackages/lpcde", "api_url": "https://rseng.github.io/software/api/repos/github/nppackages/lpcde"}, {"uid": "github/ivadomed/ivadomed", "html_url": "https://rseng.github.io/software/repository/github/ivadomed/ivadomed", "api_url": "https://rseng.github.io/software/api/repos/github/ivadomed/ivadomed"}, {"uid": "github/spedas/pyspedas", "html_url": "https://rseng.github.io/software/repository/github/spedas/pyspedas", "api_url": "https://rseng.github.io/software/api/repos/github/spedas/pyspedas"}, {"uid": "github/pyroll-project/pyroll-core", "html_url": "https://rseng.github.io/software/repository/github/pyroll-project/pyroll-core", "api_url": "https://rseng.github.io/software/api/repos/github/pyroll-project/pyroll-core"}, {"uid": "github/JamesPaynter/PyGRB", "html_url": "https://rseng.github.io/software/repository/github/JamesPaynter/PyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/JamesPaynter/PyGRB"}, {"uid": "github/spglib/spgrep", "html_url": "https://rseng.github.io/software/repository/github/spglib/spgrep", "api_url": "https://rseng.github.io/software/api/repos/github/spglib/spgrep"}, {"uid": "github/finsberg/fenicsx-beat", "html_url": "https://rseng.github.io/software/repository/github/finsberg/fenicsx-beat", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/fenicsx-beat"}, {"uid": "github/finsberg/gotranx", "html_url": "https://rseng.github.io/software/repository/github/finsberg/gotranx", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/gotranx"}, {"uid": "github/statdivlab/rigr", "html_url": "https://rseng.github.io/software/repository/github/statdivlab/rigr", "api_url": "https://rseng.github.io/software/api/repos/github/statdivlab/rigr"}, {"uid": "github/zizroc/villager", "html_url": "https://rseng.github.io/software/repository/github/zizroc/villager", "api_url": "https://rseng.github.io/software/api/repos/github/zizroc/villager"}, {"uid": "github/shenlab-sinai/ngsplot", "html_url": "https://rseng.github.io/software/repository/github/shenlab-sinai/ngsplot", "api_url": "https://rseng.github.io/software/api/repos/github/shenlab-sinai/ngsplot"}, {"uid": "github/ddarriba/prottest3", "html_url": "https://rseng.github.io/software/repository/github/ddarriba/prottest3", "api_url": "https://rseng.github.io/software/api/repos/github/ddarriba/prottest3"}, {"uid": "github/awmann/M_-M_K-", "html_url": "https://rseng.github.io/software/repository/github/awmann/M_-M_K-", "api_url": "https://rseng.github.io/software/api/repos/github/awmann/M_-M_K-"}, {"uid": "github/18parkky/NanoMnT", "html_url": "https://rseng.github.io/software/repository/github/18parkky/NanoMnT", "api_url": "https://rseng.github.io/software/api/repos/github/18parkky/NanoMnT"}, {"uid": "github/hillerlab/GenomeAlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/hillerlab/GenomeAlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/hillerlab/GenomeAlignmentTools"}, {"uid": "github/lucianolorenti/ceruleo", "html_url": "https://rseng.github.io/software/repository/github/lucianolorenti/ceruleo", "api_url": "https://rseng.github.io/software/api/repos/github/lucianolorenti/ceruleo"}, {"uid": "github/EvolOMICS-TU/ETENLNC", "html_url": "https://rseng.github.io/software/repository/github/EvolOMICS-TU/ETENLNC", "api_url": "https://rseng.github.io/software/api/repos/github/EvolOMICS-TU/ETENLNC"}, {"uid": "github/deephyper/deephyper", "html_url": "https://rseng.github.io/software/repository/github/deephyper/deephyper", "api_url": "https://rseng.github.io/software/api/repos/github/deephyper/deephyper"}, {"uid": "github/conchoecia/pauvre", "html_url": "https://rseng.github.io/software/repository/github/conchoecia/pauvre", "api_url": "https://rseng.github.io/software/api/repos/github/conchoecia/pauvre"}, {"uid": "github/franciscozorrilla/metaGEM", "html_url": "https://rseng.github.io/software/repository/github/franciscozorrilla/metaGEM", "api_url": "https://rseng.github.io/software/api/repos/github/franciscozorrilla/metaGEM"}, {"uid": "github/mmollina/viewpoly", "html_url": "https://rseng.github.io/software/repository/github/mmollina/viewpoly", "api_url": "https://rseng.github.io/software/api/repos/github/mmollina/viewpoly"}, {"uid": "github/netsiphd/netrd", "html_url": "https://rseng.github.io/software/repository/github/netsiphd/netrd", "api_url": "https://rseng.github.io/software/api/repos/github/netsiphd/netrd"}, {"uid": "github/sciapp/sampledb", "html_url": "https://rseng.github.io/software/repository/github/sciapp/sampledb", "api_url": "https://rseng.github.io/software/api/repos/github/sciapp/sampledb"}, {"uid": "github/genome/bam-readcount", "html_url": "https://rseng.github.io/software/repository/github/genome/bam-readcount", "api_url": "https://rseng.github.io/software/api/repos/github/genome/bam-readcount"}, {"uid": "github/genome/somatic-sniper", "html_url": "https://rseng.github.io/software/repository/github/genome/somatic-sniper", "api_url": "https://rseng.github.io/software/api/repos/github/genome/somatic-sniper"}, {"uid": "github/jtschindler/sculptor", "html_url": "https://rseng.github.io/software/repository/github/jtschindler/sculptor", "api_url": "https://rseng.github.io/software/api/repos/github/jtschindler/sculptor"}, {"uid": "github/stevertaylor/gw_pta_emulator", "html_url": "https://rseng.github.io/software/repository/github/stevertaylor/gw_pta_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/stevertaylor/gw_pta_emulator"}, {"uid": "github/kokkos/kokkos-fft", "html_url": "https://rseng.github.io/software/repository/github/kokkos/kokkos-fft", "api_url": "https://rseng.github.io/software/api/repos/github/kokkos/kokkos-fft"}, {"uid": "github/j-erler/pymf", "html_url": "https://rseng.github.io/software/repository/github/j-erler/pymf", "api_url": "https://rseng.github.io/software/api/repos/github/j-erler/pymf"}, {"uid": "github/CFSAN-Biostatistics/SeroTools", "html_url": "https://rseng.github.io/software/repository/github/CFSAN-Biostatistics/SeroTools", "api_url": "https://rseng.github.io/software/api/repos/github/CFSAN-Biostatistics/SeroTools"}, {"uid": "github/jordanlab/STing", "html_url": "https://rseng.github.io/software/repository/github/jordanlab/STing", "api_url": "https://rseng.github.io/software/api/repos/github/jordanlab/STing"}, {"uid": "github/JorenSix/Panako", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Panako", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Panako"}, {"uid": "github/JorenSix/Olaf", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Olaf", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Olaf"}, {"uid": "github/msyazwanfaid/hilalimagingdataextraction", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalimagingdataextraction", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalimagingdataextraction"}, {"uid": "github/msyazwanfaid/hilalpy", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalpy", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalpy"}, {"uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report"}, {"uid": "github/bokeh/bokeh", "html_url": "https://rseng.github.io/software/repository/github/bokeh/bokeh", "api_url": "https://rseng.github.io/software/api/repos/github/bokeh/bokeh"}, {"uid": "github/sefffal/Octofitter.jl", "html_url": "https://rseng.github.io/software/repository/github/sefffal/Octofitter.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sefffal/Octofitter.jl"}, {"uid": "github/saberyoung/haffet", "html_url": "https://rseng.github.io/software/repository/github/saberyoung/haffet", "api_url": "https://rseng.github.io/software/api/repos/github/saberyoung/haffet"}, {"uid": "github/arielmission-space/PAOS", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/PAOS", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/PAOS"}, {"uid": "github/arielmission-space/ExoSim2-public", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/ExoSim2-public", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/ExoSim2-public"}, {"uid": "github/IslasGECI/nerd", "html_url": "https://rseng.github.io/software/repository/github/IslasGECI/nerd", "api_url": "https://rseng.github.io/software/api/repos/github/IslasGECI/nerd"}, {"uid": "github/agerada/AIgarMIC", "html_url": "https://rseng.github.io/software/repository/github/agerada/AIgarMIC", "api_url": "https://rseng.github.io/software/api/repos/github/agerada/AIgarMIC"}, {"uid": "github/JuliaDiff/ForwardDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ForwardDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ForwardDiff.jl"}, {"uid": "github/JuliaDiff/ReverseDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ReverseDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ReverseDiff.jl"}, {"uid": "github/Incpink-Liu/DNA-storage-R_plus", "html_url": "https://rseng.github.io/software/repository/github/Incpink-Liu/DNA-storage-R_plus", "api_url": "https://rseng.github.io/software/api/repos/github/Incpink-Liu/DNA-storage-R_plus"}, {"uid": "github/lskatz/SneakerNet", "html_url": "https://rseng.github.io/software/repository/github/lskatz/SneakerNet", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/SneakerNet"}, {"uid": "github/lskatz/fasten", "html_url": "https://rseng.github.io/software/repository/github/lskatz/fasten", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/fasten"}, {"uid": "github/dentalfloss1/transients-simulations", "html_url": "https://rseng.github.io/software/repository/github/dentalfloss1/transients-simulations", "api_url": "https://rseng.github.io/software/api/repos/github/dentalfloss1/transients-simulations"}, {"uid": "github/aliojjati/MGCAMB", "html_url": "https://rseng.github.io/software/repository/github/aliojjati/MGCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/aliojjati/MGCAMB"}, {"uid": "github/miguelzuma/hi_class_public", "html_url": "https://rseng.github.io/software/repository/github/miguelzuma/hi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/miguelzuma/hi_class_public"}, {"uid": "github/cnes/EleFits", "html_url": "https://rseng.github.io/software/repository/github/cnes/EleFits", "api_url": "https://rseng.github.io/software/api/repos/github/cnes/EleFits"}, {"uid": "github/pmvreeswijk/BlackBOX", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/BlackBOX", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/BlackBOX"}, {"uid": "github/pmvreeswijk/ZOGY", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/ZOGY", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/ZOGY"}, {"uid": "github/aneeshnaik/lintsampler", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/lintsampler", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/lintsampler"}, {"uid": "github/aneeshnaik/spam", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/spam", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/spam"}, {"uid": "github/GalagaBits/JWST-FGS-Spelunker", "html_url": "https://rseng.github.io/software/repository/github/GalagaBits/JWST-FGS-Spelunker", "api_url": "https://rseng.github.io/software/api/repos/github/GalagaBits/JWST-FGS-Spelunker"}, {"uid": "github/ekiefl/pooltool", "html_url": "https://rseng.github.io/software/repository/github/ekiefl/pooltool", "api_url": "https://rseng.github.io/software/api/repos/github/ekiefl/pooltool"}, {"uid": "github/zhouzilu/DENDRO", "html_url": "https://rseng.github.io/software/repository/github/zhouzilu/DENDRO", "api_url": "https://rseng.github.io/software/api/repos/github/zhouzilu/DENDRO"}, {"uid": "github/dynamicslab/pysindy", "html_url": "https://rseng.github.io/software/repository/github/dynamicslab/pysindy", "api_url": "https://rseng.github.io/software/api/repos/github/dynamicslab/pysindy"}, {"uid": "github/EHTJulia/ScatteringOptics.jl", "html_url": "https://rseng.github.io/software/repository/github/EHTJulia/ScatteringOptics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EHTJulia/ScatteringOptics.jl"}, {"uid": "github/dlinssen/sunbather", "html_url": "https://rseng.github.io/software/repository/github/dlinssen/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/dlinssen/sunbather"}, {"uid": "github/mjoppich/bioGUItools", "html_url": "https://rseng.github.io/software/repository/github/mjoppich/bioGUItools", "api_url": "https://rseng.github.io/software/api/repos/github/mjoppich/bioGUItools"}, {"uid": "github/nrao/UniPOPS", "html_url": "https://rseng.github.io/software/repository/github/nrao/UniPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/nrao/UniPOPS"}, {"uid": "github/astroweaver/the_farmer", "html_url": "https://rseng.github.io/software/repository/github/astroweaver/the_farmer", "api_url": "https://rseng.github.io/software/api/repos/github/astroweaver/the_farmer"}, {"uid": "github/Bahler-Lab/pyphe", "html_url": "https://rseng.github.io/software/repository/github/Bahler-Lab/pyphe", "api_url": "https://rseng.github.io/software/api/repos/github/Bahler-Lab/pyphe"}, {"uid": "github/IMMM-SFA/tell", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/tell", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/tell"}, {"uid": "github/IMMM-SFA/mosartwmpy", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/mosartwmpy", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/mosartwmpy"}, {"uid": "github/IMMM-SFA/gamut", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/gamut", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/gamut"}, {"uid": "github/IMMM-SFA/naturf", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/naturf", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/naturf"}, {"uid": "github/IMMM-SFA/statemodify", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/statemodify", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/statemodify"}, {"uid": "github/TomKellyGenetics/graphsim", "html_url": "https://rseng.github.io/software/repository/github/TomKellyGenetics/graphsim", "api_url": "https://rseng.github.io/software/api/repos/github/TomKellyGenetics/graphsim"}, {"uid": "github/DrafProject/elmada", "html_url": "https://rseng.github.io/software/repository/github/DrafProject/elmada", "api_url": "https://rseng.github.io/software/api/repos/github/DrafProject/elmada"}, {"uid": "github/vibbits/phyd3", "html_url": "https://rseng.github.io/software/repository/github/vibbits/phyd3", "api_url": "https://rseng.github.io/software/api/repos/github/vibbits/phyd3"}, {"uid": "github/michalychforever/CLASS-PT", "html_url": "https://rseng.github.io/software/repository/github/michalychforever/CLASS-PT", "api_url": "https://rseng.github.io/software/api/repos/github/michalychforever/CLASS-PT"}, {"uid": "github/spectralcode/OCTproZ", "html_url": "https://rseng.github.io/software/repository/github/spectralcode/OCTproZ", "api_url": "https://rseng.github.io/software/api/repos/github/spectralcode/OCTproZ"}, {"uid": "github/dstndstn/astrometry.net", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/astrometry.net", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/astrometry.net"}, {"uid": "github/dstndstn/tractor", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/tractor", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/tractor"}, {"uid": "github/AstroAccelerateOrg/astro-accelerate", "html_url": "https://rseng.github.io/software/repository/github/AstroAccelerateOrg/astro-accelerate", "api_url": "https://rseng.github.io/software/api/repos/github/AstroAccelerateOrg/astro-accelerate"}, {"uid": "github/difuture-lmu/dsBinVal", "html_url": "https://rseng.github.io/software/repository/github/difuture-lmu/dsBinVal", "api_url": "https://rseng.github.io/software/api/repos/github/difuture-lmu/dsBinVal"}, {"uid": "github/manodeep/Corrfunc", "html_url": "https://rseng.github.io/software/repository/github/manodeep/Corrfunc", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/Corrfunc"}, {"uid": "github/manodeep/TesseRACt", "html_url": "https://rseng.github.io/software/repository/github/manodeep/TesseRACt", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/TesseRACt"}, {"uid": "github/cb-ge/ephor_wp4_agnostic_models", "html_url": "https://rseng.github.io/software/repository/github/cb-ge/ephor_wp4_agnostic_models", "api_url": "https://rseng.github.io/software/api/repos/github/cb-ge/ephor_wp4_agnostic_models"}, {"uid": "github/KIT-MBS/pyREX", "html_url": "https://rseng.github.io/software/repository/github/KIT-MBS/pyREX", "api_url": "https://rseng.github.io/software/api/repos/github/KIT-MBS/pyREX"}, {"uid": "github/dnarayanan/powderday", "html_url": "https://rseng.github.io/software/repository/github/dnarayanan/powderday", "api_url": "https://rseng.github.io/software/api/repos/github/dnarayanan/powderday"}, {"uid": "github/seclark/RHT", "html_url": "https://rseng.github.io/software/repository/github/seclark/RHT", "api_url": "https://rseng.github.io/software/api/repos/github/seclark/RHT"}, {"uid": "github/FarnazFouladi/HashSeq_Manuscript", "html_url": "https://rseng.github.io/software/repository/github/FarnazFouladi/HashSeq_Manuscript", "api_url": "https://rseng.github.io/software/api/repos/github/FarnazFouladi/HashSeq_Manuscript"}, {"uid": "github/Samreay/Barry", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Barry", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Barry"}, {"uid": "github/Samreay/ChainConsumer", "html_url": "https://rseng.github.io/software/repository/github/Samreay/ChainConsumer", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/ChainConsumer"}, {"uid": "github/Samreay/Marz", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Marz", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Marz"}, {"uid": "github/genner-lab/meta-fish-lib", "html_url": "https://rseng.github.io/software/repository/github/genner-lab/meta-fish-lib", "api_url": "https://rseng.github.io/software/api/repos/github/genner-lab/meta-fish-lib"}, {"uid": "github/ExoJulia/ExoplanetsSysSim.jl", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/ExoplanetsSysSim.jl"}, {"uid": "github/ExoJulia/SysSimExClusters", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/SysSimExClusters", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/SysSimExClusters"}, {"uid": "github/Rhyd-Lewis/GCol", "html_url": "https://rseng.github.io/software/repository/github/Rhyd-Lewis/GCol", "api_url": "https://rseng.github.io/software/api/repos/github/Rhyd-Lewis/GCol"}, {"uid": "github/barbarabodinier/fake", "html_url": "https://rseng.github.io/software/repository/github/barbarabodinier/fake", "api_url": "https://rseng.github.io/software/api/repos/github/barbarabodinier/fake"}, {"uid": "github/vipinagrawal25/MeMC", "html_url": "https://rseng.github.io/software/repository/github/vipinagrawal25/MeMC", "api_url": "https://rseng.github.io/software/api/repos/github/vipinagrawal25/MeMC"}, {"uid": "github/ifilot/edp", "html_url": "https://rseng.github.io/software/repository/github/ifilot/edp", "api_url": "https://rseng.github.io/software/api/repos/github/ifilot/edp"}, {"uid": "github/ChileanVirtualObservatory/indexing_utfsm", "html_url": "https://rseng.github.io/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", "api_url": "https://rseng.github.io/software/api/repos/github/ChileanVirtualObservatory/indexing_utfsm"}, {"uid": "github/JannisHoch/copro", "html_url": "https://rseng.github.io/software/repository/github/JannisHoch/copro", "api_url": "https://rseng.github.io/software/api/repos/github/JannisHoch/copro"}, {"uid": "github/VIB-PSB/MINI-EX", "html_url": "https://rseng.github.io/software/repository/github/VIB-PSB/MINI-EX", "api_url": "https://rseng.github.io/software/api/repos/github/VIB-PSB/MINI-EX"}, {"uid": "github/omuse-geoscience/omuse", "html_url": "https://rseng.github.io/software/repository/github/omuse-geoscience/omuse", "api_url": "https://rseng.github.io/software/api/repos/github/omuse-geoscience/omuse"}, {"uid": "github/wathela/PyMerger", "html_url": "https://rseng.github.io/software/repository/github/wathela/PyMerger", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/PyMerger"}, {"uid": "github/wathela/FIRST-CLASSIFIER", "html_url": "https://rseng.github.io/software/repository/github/wathela/FIRST-CLASSIFIER", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/FIRST-CLASSIFIER"}, {"uid": "github/fbartolic/volcano", "html_url": "https://rseng.github.io/software/repository/github/fbartolic/volcano", "api_url": "https://rseng.github.io/software/api/repos/github/fbartolic/volcano"}, {"uid": "github/danielacarrasco/GLACiAR", "html_url": "https://rseng.github.io/software/repository/github/danielacarrasco/GLACiAR", "api_url": "https://rseng.github.io/software/api/repos/github/danielacarrasco/GLACiAR"}, {"uid": "github/gpertea/cdbfasta", "html_url": "https://rseng.github.io/software/repository/github/gpertea/cdbfasta", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/cdbfasta"}, {"uid": "github/gpertea/gclib", "html_url": "https://rseng.github.io/software/repository/github/gpertea/gclib", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/gclib"}, {"uid": "github/kolikem/loma", "html_url": "https://rseng.github.io/software/repository/github/kolikem/loma", "api_url": "https://rseng.github.io/software/api/repos/github/kolikem/loma"}, {"uid": "github/SWAT-Sheffield/SAC", "html_url": "https://rseng.github.io/software/repository/github/SWAT-Sheffield/SAC", "api_url": "https://rseng.github.io/software/api/repos/github/SWAT-Sheffield/SAC"}, {"uid": "github/dipol-uf/DIPOL-UF", "html_url": "https://rseng.github.io/software/repository/github/dipol-uf/DIPOL-UF", "api_url": "https://rseng.github.io/software/api/repos/github/dipol-uf/DIPOL-UF"}, {"uid": "github/avigan/SPHERE", "html_url": "https://rseng.github.io/software/repository/github/avigan/SPHERE", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/SPHERE"}, {"uid": "github/avigan/pyZELDA", "html_url": "https://rseng.github.io/software/repository/github/avigan/pyZELDA", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/pyZELDA"}, {"uid": "github/al-mcintyre/mCaller", "html_url": "https://rseng.github.io/software/repository/github/al-mcintyre/mCaller", "api_url": "https://rseng.github.io/software/api/repos/github/al-mcintyre/mCaller"}, {"uid": "github/CHRF-Genomics/Paratype", "html_url": "https://rseng.github.io/software/repository/github/CHRF-Genomics/Paratype", "api_url": "https://rseng.github.io/software/api/repos/github/CHRF-Genomics/Paratype"}, {"uid": "github/OrchardLANL/DPFEHM.jl", "html_url": "https://rseng.github.io/software/repository/github/OrchardLANL/DPFEHM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OrchardLANL/DPFEHM.jl"}, {"uid": "github/JoWestermann/smolyax", "html_url": "https://rseng.github.io/software/repository/github/JoWestermann/smolyax", "api_url": "https://rseng.github.io/software/api/repos/github/JoWestermann/smolyax"}, {"uid": "github/C0PEP0D/otto", "html_url": "https://rseng.github.io/software/repository/github/C0PEP0D/otto", "api_url": "https://rseng.github.io/software/api/repos/github/C0PEP0D/otto"}, {"uid": "github/iain-mcdonald/PySSED", "html_url": "https://rseng.github.io/software/repository/github/iain-mcdonald/PySSED", "api_url": "https://rseng.github.io/software/api/repos/github/iain-mcdonald/PySSED"}, {"uid": "github/DistrictDataLabs/yellowbrick", "html_url": "https://rseng.github.io/software/repository/github/DistrictDataLabs/yellowbrick", "api_url": "https://rseng.github.io/software/api/repos/github/DistrictDataLabs/yellowbrick"}, {"uid": "github/egstrom/cluster-in-a-box", "html_url": "https://rseng.github.io/software/repository/github/egstrom/cluster-in-a-box", "api_url": "https://rseng.github.io/software/api/repos/github/egstrom/cluster-in-a-box"}, {"uid": "github/IonRepo/IonDiff", "html_url": "https://rseng.github.io/software/repository/github/IonRepo/IonDiff", "api_url": "https://rseng.github.io/software/api/repos/github/IonRepo/IonDiff"}, {"uid": "github/Kamuish/archi", "html_url": "https://rseng.github.io/software/repository/github/Kamuish/archi", "api_url": "https://rseng.github.io/software/api/repos/github/Kamuish/archi"}, {"uid": "github/jspsych/jspsych", "html_url": "https://rseng.github.io/software/repository/github/jspsych/jspsych", "api_url": "https://rseng.github.io/software/api/repos/github/jspsych/jspsych"}, {"uid": "github/fairtracks/omnipy_examples", "html_url": "https://rseng.github.io/software/repository/github/fairtracks/omnipy_examples", "api_url": "https://rseng.github.io/software/api/repos/github/fairtracks/omnipy_examples"}, {"uid": "github/txopen/histoc", "html_url": "https://rseng.github.io/software/repository/github/txopen/histoc", "api_url": "https://rseng.github.io/software/api/repos/github/txopen/histoc"}, {"uid": "github/ropensci-review-tools/pkgstats", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgstats", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgstats"}, {"uid": "github/ropensci-review-tools/srr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/srr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/srr"}, {"uid": "github/ropensci-review-tools/pkgcheck", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgcheck"}, {"uid": "github/ropensci-review-tools/autotest", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/autotest", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/autotest"}, {"uid": "github/ropensci-review-tools/roreviewapi", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/roreviewapi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/roreviewapi"}, {"uid": "github/bootphon/phonemizer", "html_url": "https://rseng.github.io/software/repository/github/bootphon/phonemizer", "api_url": "https://rseng.github.io/software/api/repos/github/bootphon/phonemizer"}, {"uid": "github/kkma89/dmcalc", "html_url": "https://rseng.github.io/software/repository/github/kkma89/dmcalc", "api_url": "https://rseng.github.io/software/api/repos/github/kkma89/dmcalc"}, {"uid": "github/icb-dcm/pyabc", "html_url": "https://rseng.github.io/software/repository/github/icb-dcm/pyabc", "api_url": "https://rseng.github.io/software/api/repos/github/icb-dcm/pyabc"}, {"uid": "github/pmelchior/shapelens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shapelens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shapelens"}, {"uid": "github/pmelchior/skylens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skylens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skylens"}, {"uid": "github/pmelchior/spender", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/spender", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/spender"}, {"uid": "github/pmelchior/des-exp-checker", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/des-exp-checker", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/des-exp-checker"}, {"uid": "github/pmelchior/pyGMMis", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/pyGMMis", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/pyGMMis"}, {"uid": "github/pmelchior/epsnoise", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/epsnoise", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/epsnoise"}, {"uid": "github/pmelchior/shear-stacking", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shear-stacking", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shear-stacking"}, {"uid": "github/pmelchior/skymapper", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skymapper", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skymapper"}, {"uid": "github/pmelchior/scarlet", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/scarlet", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/scarlet"}, {"uid": "github/omboersma/deepglow", "html_url": "https://rseng.github.io/software/repository/github/omboersma/deepglow", "api_url": "https://rseng.github.io/software/api/repos/github/omboersma/deepglow"}, {"uid": "github/mj-will/nessai", "html_url": "https://rseng.github.io/software/repository/github/mj-will/nessai", "api_url": "https://rseng.github.io/software/api/repos/github/mj-will/nessai"}, {"uid": "github/riatelab/osrm", "html_url": "https://rseng.github.io/software/repository/github/riatelab/osrm", "api_url": "https://rseng.github.io/software/api/repos/github/riatelab/osrm"}, {"uid": "github/ledatelescope/bifrost", "html_url": "https://rseng.github.io/software/repository/github/ledatelescope/bifrost", "api_url": "https://rseng.github.io/software/api/repos/github/ledatelescope/bifrost"}, {"uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", "html_url": "https://rseng.github.io/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", "api_url": "https://rseng.github.io/software/api/repos/github/Muhammad-Arif-NUST/BVP_Pred_Unb"}, {"uid": "github/QEF/q-e", "html_url": "https://rseng.github.io/software/repository/github/QEF/q-e", "api_url": "https://rseng.github.io/software/api/repos/github/QEF/q-e"}, {"uid": "github/HIPS/autograd", "html_url": "https://rseng.github.io/software/repository/github/HIPS/autograd", "api_url": "https://rseng.github.io/software/api/repos/github/HIPS/autograd"}, {"uid": "github/lumen-org/lumen", "html_url": "https://rseng.github.io/software/repository/github/lumen-org/lumen", "api_url": "https://rseng.github.io/software/api/repos/github/lumen-org/lumen"}, {"uid": "github/symmy596/SurfinPy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/SurfinPy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/SurfinPy"}, {"uid": "github/symmy596/Polypy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/Polypy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/Polypy"}, {"uid": "github/OpenDA-Association/OpenDA", "html_url": "https://rseng.github.io/software/repository/github/OpenDA-Association/OpenDA", "api_url": "https://rseng.github.io/software/api/repos/github/OpenDA-Association/OpenDA"}, {"uid": "github/pynucastro/pynucastro", "html_url": "https://rseng.github.io/software/repository/github/pynucastro/pynucastro", "api_url": "https://rseng.github.io/software/api/repos/github/pynucastro/pynucastro"}, {"uid": "github/molgenis/vibe-suppl", "html_url": "https://rseng.github.io/software/repository/github/molgenis/vibe-suppl", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/vibe-suppl"}, {"uid": "github/molgenis/graph2vr", "html_url": "https://rseng.github.io/software/repository/github/molgenis/graph2vr", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/graph2vr"}, {"uid": "github/cdalvaro/machine-learning-master-thesis", "html_url": "https://rseng.github.io/software/repository/github/cdalvaro/machine-learning-master-thesis", "api_url": "https://rseng.github.io/software/api/repos/github/cdalvaro/machine-learning-master-thesis"}, {"uid": "github/carpenterphysics/DarkFlux", "html_url": "https://rseng.github.io/software/repository/github/carpenterphysics/DarkFlux", "api_url": "https://rseng.github.io/software/api/repos/github/carpenterphysics/DarkFlux"}, {"uid": "github/arpan-52/Finalflash", "html_url": "https://rseng.github.io/software/repository/github/arpan-52/Finalflash", "api_url": "https://rseng.github.io/software/api/repos/github/arpan-52/Finalflash"}, {"uid": "github/eldariont/svim", "html_url": "https://rseng.github.io/software/repository/github/eldariont/svim", "api_url": "https://rseng.github.io/software/api/repos/github/eldariont/svim"}, {"uid": "github/yrjia1015/CRISPRCasStack", "html_url": "https://rseng.github.io/software/repository/github/yrjia1015/CRISPRCasStack", "api_url": "https://rseng.github.io/software/api/repos/github/yrjia1015/CRISPRCasStack"}, {"uid": "github/BioSTEAMDevelopmentGroup/thermosteam", "html_url": "https://rseng.github.io/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", "api_url": "https://rseng.github.io/software/api/repos/github/BioSTEAMDevelopmentGroup/thermosteam"}, {"uid": "github/gbrammer/unicorn", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/unicorn", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/unicorn"}, {"uid": "github/gbrammer/grizli", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/grizli", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/grizli"}, {"uid": "github/gbrammer/threedhst", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/threedhst", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/threedhst"}, {"uid": "github/CoLRev-Environment/bib-dedupe", "html_url": "https://rseng.github.io/software/repository/github/CoLRev-Environment/bib-dedupe", "api_url": "https://rseng.github.io/software/api/repos/github/CoLRev-Environment/bib-dedupe"}, {"uid": "github/JoelForamitti/agentpy", "html_url": "https://rseng.github.io/software/repository/github/JoelForamitti/agentpy", "api_url": "https://rseng.github.io/software/api/repos/github/JoelForamitti/agentpy"}, {"uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "html_url": "https://rseng.github.io/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "api_url": "https://rseng.github.io/software/api/repos/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs"}, {"uid": "github/Xomics/ACTIONdemonstrator_workflow", "html_url": "https://rseng.github.io/software/repository/github/Xomics/ACTIONdemonstrator_workflow", "api_url": "https://rseng.github.io/software/api/repos/github/Xomics/ACTIONdemonstrator_workflow"}, {"uid": "github/reneheller/pile-up", "html_url": "https://rseng.github.io/software/repository/github/reneheller/pile-up", "api_url": "https://rseng.github.io/software/api/repos/github/reneheller/pile-up"}, {"uid": "github/vals/umis", "html_url": "https://rseng.github.io/software/repository/github/vals/umis", "api_url": "https://rseng.github.io/software/api/repos/github/vals/umis"}, {"uid": "github/pyFFTW/pyFFTW", "html_url": "https://rseng.github.io/software/repository/github/pyFFTW/pyFFTW", "api_url": "https://rseng.github.io/software/api/repos/github/pyFFTW/pyFFTW"}, {"uid": "github/koenderks/jaspAudit", "html_url": "https://rseng.github.io/software/repository/github/koenderks/jaspAudit", "api_url": "https://rseng.github.io/software/api/repos/github/koenderks/jaspAudit"}, {"uid": "github/ReGIS-org/regis-v2", "html_url": "https://rseng.github.io/software/repository/github/ReGIS-org/regis-v2", "api_url": "https://rseng.github.io/software/api/repos/github/ReGIS-org/regis-v2"}, {"uid": "github/ketch/RK-Opt", "html_url": "https://rseng.github.io/software/repository/github/ketch/RK-Opt", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/RK-Opt"}, {"uid": "github/ketch/nodepy", "html_url": "https://rseng.github.io/software/repository/github/ketch/nodepy", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/nodepy"}, {"uid": "github/rodluger/everest", "html_url": "https://rseng.github.io/software/repository/github/rodluger/everest", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/everest"}, {"uid": "github/rodluger/starry_process", "html_url": "https://rseng.github.io/software/repository/github/rodluger/starry_process", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/starry_process"}, {"uid": "github/rodluger/planetplanet", "html_url": "https://rseng.github.io/software/repository/github/rodluger/planetplanet", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/planetplanet"}, {"uid": "github/rodluger/Limbdark.jl", "html_url": "https://rseng.github.io/software/repository/github/rodluger/Limbdark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/Limbdark.jl"}, {"uid": "github/zoometh/iconr", "html_url": "https://rseng.github.io/software/repository/github/zoometh/iconr", "api_url": "https://rseng.github.io/software/api/repos/github/zoometh/iconr"}, {"uid": "github/zhangzzk/forklens", "html_url": "https://rseng.github.io/software/repository/github/zhangzzk/forklens", "api_url": "https://rseng.github.io/software/api/repos/github/zhangzzk/forklens"}, {"uid": "github/EnricoCorsaro/DIAMONDS", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/DIAMONDS", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/DIAMONDS"}, {"uid": "github/EnricoCorsaro/FAMED", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/FAMED", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/FAMED"}, {"uid": "github/paumard/cubefit", "html_url": "https://rseng.github.io/software/repository/github/paumard/cubefit", "api_url": "https://rseng.github.io/software/api/repos/github/paumard/cubefit"}, {"uid": "github/aikubo/LinkingLines", "html_url": "https://rseng.github.io/software/repository/github/aikubo/LinkingLines", "api_url": "https://rseng.github.io/software/api/repos/github/aikubo/LinkingLines"}, {"uid": "github/mikekatz04/BOWIE", "html_url": "https://rseng.github.io/software/repository/github/mikekatz04/BOWIE", "api_url": "https://rseng.github.io/software/api/repos/github/mikekatz04/BOWIE"}, {"uid": "github/regonzar/paravt", "html_url": "https://rseng.github.io/software/repository/github/regonzar/paravt", "api_url": "https://rseng.github.io/software/api/repos/github/regonzar/paravt"}, {"uid": "github/GalSim-developers/GalSim", "html_url": "https://rseng.github.io/software/repository/github/GalSim-developers/GalSim", "api_url": "https://rseng.github.io/software/api/repos/github/GalSim-developers/GalSim"}, {"uid": "github/aimalz/qp", "html_url": "https://rseng.github.io/software/repository/github/aimalz/qp", "api_url": "https://rseng.github.io/software/api/repos/github/aimalz/qp"}, {"uid": "github/baker-laboratory/RoseTTAFold-All-Atom", "html_url": "https://rseng.github.io/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", "api_url": "https://rseng.github.io/software/api/repos/github/baker-laboratory/RoseTTAFold-All-Atom"}, {"uid": "github/hpc-maths/samurai", "html_url": "https://rseng.github.io/software/repository/github/hpc-maths/samurai", "api_url": "https://rseng.github.io/software/api/repos/github/hpc-maths/samurai"}, {"uid": "github/tkarwal/procoli", "html_url": "https://rseng.github.io/software/repository/github/tkarwal/procoli", "api_url": "https://rseng.github.io/software/api/repos/github/tkarwal/procoli"}, {"uid": "github/SCM-NV/qmflows", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows"}, {"uid": "github/SCM-NV/pyZacros", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/pyZacros", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/pyZacros"}, {"uid": "github/SCM-NV/qmflows-namd", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows-namd", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows-namd"}, {"uid": "github/cbalbin-FIU/Epitopedia", "html_url": "https://rseng.github.io/software/repository/github/cbalbin-FIU/Epitopedia", "api_url": "https://rseng.github.io/software/api/repos/github/cbalbin-FIU/Epitopedia"}, {"uid": "github/rdpstaff/TaxonomyTree", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/TaxonomyTree", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/TaxonomyTree"}, {"uid": "github/rdpstaff/classifier", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/classifier", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/classifier"}, {"uid": "github/rdpstaff/AlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/AlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/AlignmentTools"}, {"uid": "github/rdpstaff/ReadSeq", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/ReadSeq", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/ReadSeq"}, {"uid": "github/esperlman/JetCurry", "html_url": "https://rseng.github.io/software/repository/github/esperlman/JetCurry", "api_url": "https://rseng.github.io/software/api/repos/github/esperlman/JetCurry"}, {"uid": "github/dunnkers/fseval", "html_url": "https://rseng.github.io/software/repository/github/dunnkers/fseval", "api_url": "https://rseng.github.io/software/api/repos/github/dunnkers/fseval"}, {"uid": "github/auctus-team/pycapacity", "html_url": "https://rseng.github.io/software/repository/github/auctus-team/pycapacity", "api_url": "https://rseng.github.io/software/api/repos/github/auctus-team/pycapacity"}, {"uid": "github/damask-multiphysics/DAMASK", "html_url": "https://rseng.github.io/software/repository/github/damask-multiphysics/DAMASK", "api_url": "https://rseng.github.io/software/api/repos/github/damask-multiphysics/DAMASK"}, {"uid": "github/palumbom/grass", "html_url": "https://rseng.github.io/software/repository/github/palumbom/grass", "api_url": "https://rseng.github.io/software/api/repos/github/palumbom/grass"}, {"uid": "github/duducosmos/pycosmicstar", "html_url": "https://rseng.github.io/software/repository/github/duducosmos/pycosmicstar", "api_url": "https://rseng.github.io/software/api/repos/github/duducosmos/pycosmicstar"}, {"uid": "github/CoolWorlds/ExoPriors", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/ExoPriors", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/ExoPriors"}, {"uid": "github/CoolWorlds/exoinformatics", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/exoinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/exoinformatics"}, {"uid": "github/ndaniel/fusioncatcher", "html_url": "https://rseng.github.io/software/repository/github/ndaniel/fusioncatcher", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniel/fusioncatcher"}, {"uid": "github/TPI-Immunogenetics/igmat", "html_url": "https://rseng.github.io/software/repository/github/TPI-Immunogenetics/igmat", "api_url": "https://rseng.github.io/software/api/repos/github/TPI-Immunogenetics/igmat"}, {"uid": "github/humanfactors/FIPS", "html_url": "https://rseng.github.io/software/repository/github/humanfactors/FIPS", "api_url": "https://rseng.github.io/software/api/repos/github/humanfactors/FIPS"}, {"uid": "github/FlorianThibord/OptimiR", "html_url": "https://rseng.github.io/software/repository/github/FlorianThibord/OptimiR", "api_url": "https://rseng.github.io/software/api/repos/github/FlorianThibord/OptimiR"}, {"uid": "github/ocxtal/minialign", "html_url": "https://rseng.github.io/software/repository/github/ocxtal/minialign", "api_url": "https://rseng.github.io/software/api/repos/github/ocxtal/minialign"}, {"uid": "github/bartongroup/yanosim", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/yanosim", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/yanosim"}, {"uid": "github/bartongroup/RoSA", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/RoSA", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/RoSA"}, {"uid": "github/jluastro/PopSyCLE", "html_url": "https://rseng.github.io/software/repository/github/jluastro/PopSyCLE", "api_url": "https://rseng.github.io/software/api/repos/github/jluastro/PopSyCLE"}, {"uid": "github/sybila/biodivine-aeon-py", "html_url": "https://rseng.github.io/software/repository/github/sybila/biodivine-aeon-py", "api_url": "https://rseng.github.io/software/api/repos/github/sybila/biodivine-aeon-py"}, {"uid": "github/redcap-tools/PyCap", "html_url": "https://rseng.github.io/software/repository/github/redcap-tools/PyCap", "api_url": "https://rseng.github.io/software/api/repos/github/redcap-tools/PyCap"}, {"uid": "github/taranu/AllStarFit", "html_url": "https://rseng.github.io/software/repository/github/taranu/AllStarFit", "api_url": "https://rseng.github.io/software/api/repos/github/taranu/AllStarFit"}, {"uid": "github/DamynChipman/EllipticForest", "html_url": "https://rseng.github.io/software/repository/github/DamynChipman/EllipticForest", "api_url": "https://rseng.github.io/software/api/repos/github/DamynChipman/EllipticForest"}, {"uid": "github/dcouvin/CRISPRCasFinder", "html_url": "https://rseng.github.io/software/repository/github/dcouvin/CRISPRCasFinder", "api_url": "https://rseng.github.io/software/api/repos/github/dcouvin/CRISPRCasFinder"}, {"uid": "github/tidymess-code/tidymess", "html_url": "https://rseng.github.io/software/repository/github/tidymess-code/tidymess", "api_url": "https://rseng.github.io/software/api/repos/github/tidymess-code/tidymess"}, {"uid": "github/arq5x/lumpy-sv", "html_url": "https://rseng.github.io/software/repository/github/arq5x/lumpy-sv", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/lumpy-sv"}, {"uid": "github/arq5x/poretools", "html_url": "https://rseng.github.io/software/repository/github/arq5x/poretools", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/poretools"}, {"uid": "github/arq5x/bedtools2", "html_url": "https://rseng.github.io/software/repository/github/arq5x/bedtools2", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/bedtools2"}, {"uid": "github/arq5x/grabix", "html_url": "https://rseng.github.io/software/repository/github/arq5x/grabix", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/grabix"}, {"uid": "github/gigjozsa/tirific", "html_url": "https://rseng.github.io/software/repository/github/gigjozsa/tirific", "api_url": "https://rseng.github.io/software/api/repos/github/gigjozsa/tirific"}, {"uid": "github/DReichLab/EIG", "html_url": "https://rseng.github.io/software/repository/github/DReichLab/EIG", "api_url": "https://rseng.github.io/software/api/repos/github/DReichLab/EIG"}, {"uid": "github/PathoGenOmics-Lab/get_mnv", "html_url": "https://rseng.github.io/software/repository/github/PathoGenOmics-Lab/get_mnv", "api_url": "https://rseng.github.io/software/api/repos/github/PathoGenOmics-Lab/get_mnv"}, {"uid": "github/IFCA-Advanced-Computing/FAIR_eva", "html_url": "https://rseng.github.io/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", "api_url": "https://rseng.github.io/software/api/repos/github/IFCA-Advanced-Computing/FAIR_eva"}, {"uid": "github/pydemull/activAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/pydemull/activAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/pydemull/activAnalyzer"}, {"uid": "github/andr1976/HydDown", "html_url": "https://rseng.github.io/software/repository/github/andr1976/HydDown", "api_url": "https://rseng.github.io/software/api/repos/github/andr1976/HydDown"}, {"uid": "github/bioexcel/biobb_wf_flexdyn", "html_url": "https://rseng.github.io/software/repository/github/bioexcel/biobb_wf_flexdyn", "api_url": "https://rseng.github.io/software/api/repos/github/bioexcel/biobb_wf_flexdyn"}, {"uid": "github/li-yangyang/lotus", "html_url": "https://rseng.github.io/software/repository/github/li-yangyang/lotus", "api_url": "https://rseng.github.io/software/api/repos/github/li-yangyang/lotus"}, {"uid": "github/NIFTy-PPL/JAXbind", "html_url": "https://rseng.github.io/software/repository/github/NIFTy-PPL/JAXbind", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTy-PPL/JAXbind"}, {"uid": "github/martinlackner/abcvoting", "html_url": "https://rseng.github.io/software/repository/github/martinlackner/abcvoting", "api_url": "https://rseng.github.io/software/api/repos/github/martinlackner/abcvoting"}, {"uid": "github/lime-rt/lime", "html_url": "https://rseng.github.io/software/repository/github/lime-rt/lime", "api_url": "https://rseng.github.io/software/api/repos/github/lime-rt/lime"}, {"uid": "github/imperialchem/mrd-demo", "html_url": "https://rseng.github.io/software/repository/github/imperialchem/mrd-demo", "api_url": "https://rseng.github.io/software/api/repos/github/imperialchem/mrd-demo"}, {"uid": "github/syasini/AstroPaint", "html_url": "https://rseng.github.io/software/repository/github/syasini/AstroPaint", "api_url": "https://rseng.github.io/software/api/repos/github/syasini/AstroPaint"}, {"uid": "github/benyhh/ml-telescope-pointing-correction", "html_url": "https://rseng.github.io/software/repository/github/benyhh/ml-telescope-pointing-correction", "api_url": "https://rseng.github.io/software/api/repos/github/benyhh/ml-telescope-pointing-correction"}, {"uid": "github/kylejgillett/sounderpy", "html_url": "https://rseng.github.io/software/repository/github/kylejgillett/sounderpy", "api_url": "https://rseng.github.io/software/api/repos/github/kylejgillett/sounderpy"}, {"uid": "github/anchal-009/SAVED21cm", "html_url": "https://rseng.github.io/software/repository/github/anchal-009/SAVED21cm", "api_url": "https://rseng.github.io/software/api/repos/github/anchal-009/SAVED21cm"}, {"uid": "github/sxs-collaboration/gwsurrogate", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/gwsurrogate", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/gwsurrogate"}, {"uid": "github/sxs-collaboration/spectre", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/spectre", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/spectre"}, {"uid": "github/karlropkins/AQEval", "html_url": "https://rseng.github.io/software/repository/github/karlropkins/AQEval", "api_url": "https://rseng.github.io/software/api/repos/github/karlropkins/AQEval"}, {"uid": "github/robbievanleeuwen/section-properties", "html_url": "https://rseng.github.io/software/repository/github/robbievanleeuwen/section-properties", "api_url": "https://rseng.github.io/software/api/repos/github/robbievanleeuwen/section-properties"}, {"uid": "github/jhayer/baargin", "html_url": "https://rseng.github.io/software/repository/github/jhayer/baargin", "api_url": "https://rseng.github.io/software/api/repos/github/jhayer/baargin"}, {"uid": "github/simple-crypto/SCALib", "html_url": "https://rseng.github.io/software/repository/github/simple-crypto/SCALib", "api_url": "https://rseng.github.io/software/api/repos/github/simple-crypto/SCALib"}, {"uid": "github/dicompyler/dicompyler-core", "html_url": "https://rseng.github.io/software/repository/github/dicompyler/dicompyler-core", "api_url": "https://rseng.github.io/software/api/repos/github/dicompyler/dicompyler-core"}, {"uid": "github/pierrexyz/pybird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/pybird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/pybird"}, {"uid": "github/pierrexyz/cbird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/cbird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/cbird"}, {"uid": "github/SciML/DataInterpolations.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/DataInterpolations.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/DataInterpolations.jl"}, {"uid": "github/SciML/GlobalSensitivity.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/GlobalSensitivity.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/GlobalSensitivity.jl"}, {"uid": "github/compomics/COSS", "html_url": "https://rseng.github.io/software/repository/github/compomics/COSS", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/COSS"}, {"uid": "github/compomics/xilmass", "html_url": "https://rseng.github.io/software/repository/github/compomics/xilmass", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/xilmass"}, {"uid": "github/compomics/DeepLC", "html_url": "https://rseng.github.io/software/repository/github/compomics/DeepLC", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/DeepLC"}, {"uid": "github/samtools/bcftools", "html_url": "https://rseng.github.io/software/repository/github/samtools/bcftools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/bcftools"}, {"uid": "github/samtools/samtools", "html_url": "https://rseng.github.io/software/repository/github/samtools/samtools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/samtools"}, {"uid": "github/samtools/htsjdk", "html_url": "https://rseng.github.io/software/repository/github/samtools/htsjdk", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htsjdk"}, {"uid": "github/samtools/htslib", "html_url": "https://rseng.github.io/software/repository/github/samtools/htslib", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htslib"}, {"uid": "github/cdw9bf/CompactGroup", "html_url": "https://rseng.github.io/software/repository/github/cdw9bf/CompactGroup", "api_url": "https://rseng.github.io/software/api/repos/github/cdw9bf/CompactGroup"}, {"uid": "github/intelligent-soft-robots/o80", "html_url": "https://rseng.github.io/software/repository/github/intelligent-soft-robots/o80", "api_url": "https://rseng.github.io/software/api/repos/github/intelligent-soft-robots/o80"}, {"uid": "github/thelfer/mfem-mgis", "html_url": "https://rseng.github.io/software/repository/github/thelfer/mfem-mgis", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/mfem-mgis"}, {"uid": "github/thelfer/MFrontGallery", "html_url": "https://rseng.github.io/software/repository/github/thelfer/MFrontGallery", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/MFrontGallery"}, {"uid": "github/annacrnn/rebound_fragmentation", "html_url": "https://rseng.github.io/software/repository/github/annacrnn/rebound_fragmentation", "api_url": "https://rseng.github.io/software/api/repos/github/annacrnn/rebound_fragmentation"}, {"uid": "github/kemasuda/jnkepler", "html_url": "https://rseng.github.io/software/repository/github/kemasuda/jnkepler", "api_url": "https://rseng.github.io/software/api/repos/github/kemasuda/jnkepler"}, {"uid": "github/szpiech/selscan", "html_url": "https://rseng.github.io/software/repository/github/szpiech/selscan", "api_url": "https://rseng.github.io/software/api/repos/github/szpiech/selscan"}, {"uid": "github/jwohlwend/boltz", "html_url": "https://rseng.github.io/software/repository/github/jwohlwend/boltz", "api_url": "https://rseng.github.io/software/api/repos/github/jwohlwend/boltz"}, {"uid": "github/mpievolbio-scicomp/cancer_sim", "html_url": "https://rseng.github.io/software/repository/github/mpievolbio-scicomp/cancer_sim", "api_url": "https://rseng.github.io/software/api/repos/github/mpievolbio-scicomp/cancer_sim"}, {"uid": "github/MariaTsantaki/FASMA-synthesis", "html_url": "https://rseng.github.io/software/repository/github/MariaTsantaki/FASMA-synthesis", "api_url": "https://rseng.github.io/software/api/repos/github/MariaTsantaki/FASMA-synthesis"}, {"uid": "github/dtanoglidis/DeepShadows", "html_url": "https://rseng.github.io/software/repository/github/dtanoglidis/DeepShadows", "api_url": "https://rseng.github.io/software/api/repos/github/dtanoglidis/DeepShadows"}, {"uid": "github/NicOudart/PyBWE", "html_url": "https://rseng.github.io/software/repository/github/NicOudart/PyBWE", "api_url": "https://rseng.github.io/software/api/repos/github/NicOudart/PyBWE"}, {"uid": "github/telegraphic/fits2hdf", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/fits2hdf", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/fits2hdf"}, {"uid": "github/telegraphic/pygsm", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/pygsm", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/pygsm"}, {"uid": "github/RasmussenLab/vamb", "html_url": "https://rseng.github.io/software/repository/github/RasmussenLab/vamb", "api_url": "https://rseng.github.io/software/api/repos/github/RasmussenLab/vamb"}, {"uid": "github/ggobi/ggobi", "html_url": "https://rseng.github.io/software/repository/github/ggobi/ggobi", "api_url": "https://rseng.github.io/software/api/repos/github/ggobi/ggobi"}, {"uid": "github/sundarjhu/2-DUST", "html_url": "https://rseng.github.io/software/repository/github/sundarjhu/2-DUST", "api_url": "https://rseng.github.io/software/api/repos/github/sundarjhu/2-DUST"}, {"uid": "github/pierrepo/autoclassweb", "html_url": "https://rseng.github.io/software/repository/github/pierrepo/autoclassweb", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepo/autoclassweb"}, {"uid": "github/glenco/lensed", "html_url": "https://rseng.github.io/software/repository/github/glenco/lensed", "api_url": "https://rseng.github.io/software/api/repos/github/glenco/lensed"}, {"uid": "github/SESMG/SESMG", "html_url": "https://rseng.github.io/software/repository/github/SESMG/SESMG", "api_url": "https://rseng.github.io/software/api/repos/github/SESMG/SESMG"}, {"uid": "github/ajohnson-uoregon/llvm-project", "html_url": "https://rseng.github.io/software/repository/github/ajohnson-uoregon/llvm-project", "api_url": "https://rseng.github.io/software/api/repos/github/ajohnson-uoregon/llvm-project"}, {"uid": "github/JuliaPlots/Makie.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPlots/Makie.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPlots/Makie.jl"}, {"uid": "github/RETURN-project/BenchmarkRecovery", "html_url": "https://rseng.github.io/software/repository/github/RETURN-project/BenchmarkRecovery", "api_url": "https://rseng.github.io/software/api/repos/github/RETURN-project/BenchmarkRecovery"}, {"uid": "github/RemieJanssen/phylox", "html_url": "https://rseng.github.io/software/repository/github/RemieJanssen/phylox", "api_url": "https://rseng.github.io/software/api/repos/github/RemieJanssen/phylox"}, {"uid": "github/samconnolly/DELightcurveSimulation", "html_url": "https://rseng.github.io/software/repository/github/samconnolly/DELightcurveSimulation", "api_url": "https://rseng.github.io/software/api/repos/github/samconnolly/DELightcurveSimulation"}, {"uid": "github/erling6232/imagedata", "html_url": "https://rseng.github.io/software/repository/github/erling6232/imagedata", "api_url": "https://rseng.github.io/software/api/repos/github/erling6232/imagedata"}, {"uid": "github/twopin/CAMP", "html_url": "https://rseng.github.io/software/repository/github/twopin/CAMP", "api_url": "https://rseng.github.io/software/api/repos/github/twopin/CAMP"}, {"uid": "github/PennyLaneAI/catalyst", "html_url": "https://rseng.github.io/software/repository/github/PennyLaneAI/catalyst", "api_url": "https://rseng.github.io/software/api/repos/github/PennyLaneAI/catalyst"}, {"uid": "github/slimgroup/InvertibleNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/slimgroup/InvertibleNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/slimgroup/InvertibleNetworks.jl"}, {"uid": "github/kernsuite-debian/parseltongue", "html_url": "https://rseng.github.io/software/repository/github/kernsuite-debian/parseltongue", "api_url": "https://rseng.github.io/software/api/repos/github/kernsuite-debian/parseltongue"}, {"uid": "github/akleroy/phangs_imaging_scripts", "html_url": "https://rseng.github.io/software/repository/github/akleroy/phangs_imaging_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/akleroy/phangs_imaging_scripts"}, {"uid": "github/trivnguyen/florah", "html_url": "https://rseng.github.io/software/repository/github/trivnguyen/florah", "api_url": "https://rseng.github.io/software/api/repos/github/trivnguyen/florah"}, {"uid": "github/exafmm/exafmm-t", "html_url": "https://rseng.github.io/software/repository/github/exafmm/exafmm-t", "api_url": "https://rseng.github.io/software/api/repos/github/exafmm/exafmm-t"}, {"uid": "github/murphycj/AGFusion", "html_url": "https://rseng.github.io/software/repository/github/murphycj/AGFusion", "api_url": "https://rseng.github.io/software/api/repos/github/murphycj/AGFusion"}, {"uid": "github/rramadeu/AGHmatrix", "html_url": "https://rseng.github.io/software/repository/github/rramadeu/AGHmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/rramadeu/AGHmatrix"}, {"uid": "github/tsfloss/DensityFieldTools", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/DensityFieldTools", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/DensityFieldTools"}, {"uid": "github/tsfloss/URecon", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/URecon", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/URecon"}, {"uid": "github/tsfloss/BFast", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/BFast", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/BFast"}, {"uid": "github/radis/radis", "html_url": "https://rseng.github.io/software/repository/github/radis/radis", "api_url": "https://rseng.github.io/software/api/repos/github/radis/radis"}, {"uid": "github/ncas-cms/pyfive", "html_url": "https://rseng.github.io/software/repository/github/ncas-cms/pyfive", "api_url": "https://rseng.github.io/software/api/repos/github/ncas-cms/pyfive"}, {"uid": "github/ChristopherWilks/megadepth", "html_url": "https://rseng.github.io/software/repository/github/ChristopherWilks/megadepth", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopherWilks/megadepth"}, {"uid": "github/anwarbio/bioassays", "html_url": "https://rseng.github.io/software/repository/github/anwarbio/bioassays", "api_url": "https://rseng.github.io/software/api/repos/github/anwarbio/bioassays"}, {"uid": "github/heuermh/dishevelled-bio", "html_url": "https://rseng.github.io/software/repository/github/heuermh/dishevelled-bio", "api_url": "https://rseng.github.io/software/api/repos/github/heuermh/dishevelled-bio"}, {"uid": "github/jordanflitter/21cmFirstCLASS", "html_url": "https://rseng.github.io/software/repository/github/jordanflitter/21cmFirstCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/jordanflitter/21cmFirstCLASS"}, {"uid": "github/JuBiotech/peak-performance", "html_url": "https://rseng.github.io/software/repository/github/JuBiotech/peak-performance", "api_url": "https://rseng.github.io/software/api/repos/github/JuBiotech/peak-performance"}, {"uid": "github/hyattpd/Prodigal", "html_url": "https://rseng.github.io/software/repository/github/hyattpd/Prodigal", "api_url": "https://rseng.github.io/software/api/repos/github/hyattpd/Prodigal"}, {"uid": "github/kkrismer/scansite4", "html_url": "https://rseng.github.io/software/repository/github/kkrismer/scansite4", "api_url": "https://rseng.github.io/software/api/repos/github/kkrismer/scansite4"}, {"uid": "github/axgoujon/convex_ridge_regularizers", "html_url": "https://rseng.github.io/software/repository/github/axgoujon/convex_ridge_regularizers", "api_url": "https://rseng.github.io/software/api/repos/github/axgoujon/convex_ridge_regularizers"}, {"uid": "github/henrycousins/gspa", "html_url": "https://rseng.github.io/software/repository/github/henrycousins/gspa", "api_url": "https://rseng.github.io/software/api/repos/github/henrycousins/gspa"}, {"uid": "github/adigenova/wengan", "html_url": "https://rseng.github.io/software/repository/github/adigenova/wengan", "api_url": "https://rseng.github.io/software/api/repos/github/adigenova/wengan"}, {"uid": "github/pcubillos/repack", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/repack", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/repack"}, {"uid": "github/pcubillos/rate", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/rate", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/rate"}, {"uid": "github/pcubillos/pyratbay", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/pyratbay", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/pyratbay"}, {"uid": "github/pcubillos/gen_tso", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/gen_tso", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/gen_tso"}, {"uid": "github/pcubillos/mc3", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/mc3", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/mc3"}, {"uid": "github/xenon-middleware/xenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/xenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/xenon"}, {"uid": "github/xenon-middleware/pyxenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/pyxenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/pyxenon"}, {"uid": "github/mlr-org/mcboost", "html_url": "https://rseng.github.io/software/repository/github/mlr-org/mcboost", "api_url": "https://rseng.github.io/software/api/repos/github/mlr-org/mcboost"}, {"uid": "github/rudolffu/pyfosc", "html_url": "https://rseng.github.io/software/repository/github/rudolffu/pyfosc", "api_url": "https://rseng.github.io/software/api/repos/github/rudolffu/pyfosc"}, {"uid": "github/LSSTDESC/Spectractor", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/Spectractor", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/Spectractor"}, {"uid": "github/LSSTDESC/chroma", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/chroma", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/chroma"}, {"uid": "github/LSSTDESC/snmachine", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/snmachine", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/snmachine"}, {"uid": "github/LSSTDESC/BlendingToolKit", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/BlendingToolKit", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/BlendingToolKit"}, {"uid": "github/LSSTDESC/sacc", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/sacc", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/sacc"}, {"uid": "github/LSSTDESC/descqa", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/descqa", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/descqa"}, {"uid": "github/LSSTDESC/CCL", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/CCL", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/CCL"}, {"uid": "github/LSSTDESC/NaMaster", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/NaMaster", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/NaMaster"}, {"uid": "github/LSSTDESC/WeakLensingDeblending", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/WeakLensingDeblending", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/WeakLensingDeblending"}, {"uid": "github/gdefazio/kMetaShot", "html_url": "https://rseng.github.io/software/repository/github/gdefazio/kMetaShot", "api_url": "https://rseng.github.io/software/api/repos/github/gdefazio/kMetaShot"}, {"uid": "github/skypyproject/skypy", "html_url": "https://rseng.github.io/software/repository/github/skypyproject/skypy", "api_url": "https://rseng.github.io/software/api/repos/github/skypyproject/skypy"}, {"uid": "github/david-mathews-1994/deltarice", "html_url": "https://rseng.github.io/software/repository/github/david-mathews-1994/deltarice", "api_url": "https://rseng.github.io/software/api/repos/github/david-mathews-1994/deltarice"}, {"uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum"}, {"uid": "github/cicirello/Chips-n-Salsa", "html_url": "https://rseng.github.io/software/repository/github/cicirello/Chips-n-Salsa", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/Chips-n-Salsa"}, {"uid": "github/cicirello/rho-mu", "html_url": "https://rseng.github.io/software/repository/github/cicirello/rho-mu", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/rho-mu"}, {"uid": "github/cosimameyer/overviewR", "html_url": "https://rseng.github.io/software/repository/github/cosimameyer/overviewR", "api_url": "https://rseng.github.io/software/api/repos/github/cosimameyer/overviewR"}, {"uid": "github/Deyht/CIANNA", "html_url": "https://rseng.github.io/software/repository/github/Deyht/CIANNA", "api_url": "https://rseng.github.io/software/api/repos/github/Deyht/CIANNA"}, {"uid": "github/ParkerLab/ataqv", "html_url": "https://rseng.github.io/software/repository/github/ParkerLab/ataqv", "api_url": "https://rseng.github.io/software/api/repos/github/ParkerLab/ataqv"}, {"uid": "github/ImproPhoto/pymicmac", "html_url": "https://rseng.github.io/software/repository/github/ImproPhoto/pymicmac", "api_url": "https://rseng.github.io/software/api/repos/github/ImproPhoto/pymicmac"}, {"uid": "github/PEJpOhno/SMiPoly", "html_url": "https://rseng.github.io/software/repository/github/PEJpOhno/SMiPoly", "api_url": "https://rseng.github.io/software/api/repos/github/PEJpOhno/SMiPoly"}, {"uid": "github/athulpg007/AMAT", "html_url": "https://rseng.github.io/software/repository/github/athulpg007/AMAT", "api_url": "https://rseng.github.io/software/api/repos/github/athulpg007/AMAT"}, {"uid": "github/ManuelRausch/StatConfR", "html_url": "https://rseng.github.io/software/repository/github/ManuelRausch/StatConfR", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelRausch/StatConfR"}, {"uid": "github/andyphilips/dynamac", "html_url": "https://rseng.github.io/software/repository/github/andyphilips/dynamac", "api_url": "https://rseng.github.io/software/api/repos/github/andyphilips/dynamac"}, {"uid": "github/Nadi-System/nadi-system", "html_url": "https://rseng.github.io/software/repository/github/Nadi-System/nadi-system", "api_url": "https://rseng.github.io/software/api/repos/github/Nadi-System/nadi-system"}, {"uid": "github/francescoa97outlook/pyExoRaMa", "html_url": "https://rseng.github.io/software/repository/github/francescoa97outlook/pyExoRaMa", "api_url": "https://rseng.github.io/software/api/repos/github/francescoa97outlook/pyExoRaMa"}, {"uid": "github/Pas-Kapli/mptp", "html_url": "https://rseng.github.io/software/repository/github/Pas-Kapli/mptp", "api_url": "https://rseng.github.io/software/api/repos/github/Pas-Kapli/mptp"}, {"uid": "github/candebellavita/vkompth", "html_url": "https://rseng.github.io/software/repository/github/candebellavita/vkompth", "api_url": "https://rseng.github.io/software/api/repos/github/candebellavita/vkompth"}, {"uid": "github/Xia-Yijie/Xponge", "html_url": "https://rseng.github.io/software/repository/github/Xia-Yijie/Xponge", "api_url": "https://rseng.github.io/software/api/repos/github/Xia-Yijie/Xponge"}, {"uid": "github/phineasng/DECODE", "html_url": "https://rseng.github.io/software/repository/github/phineasng/DECODE", "api_url": "https://rseng.github.io/software/api/repos/github/phineasng/DECODE"}, {"uid": "github/TommyJones/tidylda", "html_url": "https://rseng.github.io/software/repository/github/TommyJones/tidylda", "api_url": "https://rseng.github.io/software/api/repos/github/TommyJones/tidylda"}, {"uid": "github/yuliang419/AstroNet-Triage", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Triage", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Triage"}, {"uid": "github/yuliang419/AstroNet-Vetting", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Vetting", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Vetting"}, {"uid": "github/ginolhac/mapDamage", "html_url": "https://rseng.github.io/software/repository/github/ginolhac/mapDamage", "api_url": "https://rseng.github.io/software/api/repos/github/ginolhac/mapDamage"}, {"uid": "github/lilyminium/psiresp", "html_url": "https://rseng.github.io/software/repository/github/lilyminium/psiresp", "api_url": "https://rseng.github.io/software/api/repos/github/lilyminium/psiresp"}, {"uid": "github/giuspugl/COnet", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/COnet", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/COnet"}, {"uid": "github/giuspugl/picasso", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/picasso"}, {"uid": "github/giuspugl/MCMole3D", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/MCMole3D", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/MCMole3D"}, {"uid": "github/giuspugl/fgcluster", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/fgcluster", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/fgcluster"}, {"uid": "github/hongwanliu/DarkHistory", "html_url": "https://rseng.github.io/software/repository/github/hongwanliu/DarkHistory", "api_url": "https://rseng.github.io/software/api/repos/github/hongwanliu/DarkHistory"}, {"uid": "github/aamedinburgh/igmtransmission", "html_url": "https://rseng.github.io/software/repository/github/aamedinburgh/igmtransmission", "api_url": "https://rseng.github.io/software/api/repos/github/aamedinburgh/igmtransmission"}, {"uid": "github/aasensio/molpop-cep", "html_url": "https://rseng.github.io/software/repository/github/aasensio/molpop-cep", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/molpop-cep"}, {"uid": "github/aasensio/torchmfbd", "html_url": "https://rseng.github.io/software/repository/github/aasensio/torchmfbd", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/torchmfbd"}, {"uid": "github/aasensio/sicon", "html_url": "https://rseng.github.io/software/repository/github/aasensio/sicon", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/sicon"}, {"uid": "github/aasensio/hazel", "html_url": "https://rseng.github.io/software/repository/github/aasensio/hazel", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/hazel"}, {"uid": "github/jdiasn/lidarSuit", "html_url": "https://rseng.github.io/software/repository/github/jdiasn/lidarSuit", "api_url": "https://rseng.github.io/software/api/repos/github/jdiasn/lidarSuit"}, {"uid": "github/alejandrobll/py-sphviewer", "html_url": "https://rseng.github.io/software/repository/github/alejandrobll/py-sphviewer", "api_url": "https://rseng.github.io/software/api/repos/github/alejandrobll/py-sphviewer"}, {"uid": "github/calebclass/Shiny-NanoTube", "html_url": "https://rseng.github.io/software/repository/github/calebclass/Shiny-NanoTube", "api_url": "https://rseng.github.io/software/api/repos/github/calebclass/Shiny-NanoTube"}, {"uid": "github/fumi-github/omicwas", "html_url": "https://rseng.github.io/software/repository/github/fumi-github/omicwas", "api_url": "https://rseng.github.io/software/api/repos/github/fumi-github/omicwas"}, {"uid": "github/Krona/wiki", "html_url": "https://rseng.github.io/software/repository/github/Krona/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/Krona/wiki"}, {"uid": "github/nomad-coe/greenX", "html_url": "https://rseng.github.io/software/repository/github/nomad-coe/greenX", "api_url": "https://rseng.github.io/software/api/repos/github/nomad-coe/greenX"}, {"uid": "github/sfschen/spinosaurus", "html_url": "https://rseng.github.io/software/repository/github/sfschen/spinosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/spinosaurus"}, {"uid": "github/sfschen/velocileptors", "html_url": "https://rseng.github.io/software/repository/github/sfschen/velocileptors", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/velocileptors"}, {"uid": "github/ConnorDonegan/geostan", "html_url": "https://rseng.github.io/software/repository/github/ConnorDonegan/geostan", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorDonegan/geostan"}, {"uid": "github/IftachSadeh/ANNZ", "html_url": "https://rseng.github.io/software/repository/github/IftachSadeh/ANNZ", "api_url": "https://rseng.github.io/software/api/repos/github/IftachSadeh/ANNZ"}, {"uid": "github/scottgigante/picopore", "html_url": "https://rseng.github.io/software/repository/github/scottgigante/picopore", "api_url": "https://rseng.github.io/software/api/repos/github/scottgigante/picopore"}, {"uid": "github/silkemaes/MACE", "html_url": "https://rseng.github.io/software/repository/github/silkemaes/MACE", "api_url": "https://rseng.github.io/software/api/repos/github/silkemaes/MACE"}, {"uid": "github/Basvanstein/GSAreport", "html_url": "https://rseng.github.io/software/repository/github/Basvanstein/GSAreport", "api_url": "https://rseng.github.io/software/api/repos/github/Basvanstein/GSAreport"}, {"uid": "github/mpokorny/vysmaw", "html_url": "https://rseng.github.io/software/repository/github/mpokorny/vysmaw", "api_url": "https://rseng.github.io/software/api/repos/github/mpokorny/vysmaw"}, {"uid": "github/MiguelEA/nudec_BSM", "html_url": "https://rseng.github.io/software/repository/github/MiguelEA/nudec_BSM", "api_url": "https://rseng.github.io/software/api/repos/github/MiguelEA/nudec_BSM"}, {"uid": "github/pysersic/pysersic", "html_url": "https://rseng.github.io/software/repository/github/pysersic/pysersic", "api_url": "https://rseng.github.io/software/api/repos/github/pysersic/pysersic"}, {"uid": "github/524D/compareMS2", "html_url": "https://rseng.github.io/software/repository/github/524D/compareMS2", "api_url": "https://rseng.github.io/software/api/repos/github/524D/compareMS2"}, {"uid": "github/ronnyerrmann/HiFLEx", "html_url": "https://rseng.github.io/software/repository/github/ronnyerrmann/HiFLEx", "api_url": "https://rseng.github.io/software/api/repos/github/ronnyerrmann/HiFLEx"}, {"uid": "github/stingraysoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/stingraysoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/stingraysoftware/stingray"}, {"uid": "github/sieunhanbom04/support-exploration-matrix-factorization", "html_url": "https://rseng.github.io/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", "api_url": "https://rseng.github.io/software/api/repos/github/sieunhanbom04/support-exploration-matrix-factorization"}, {"uid": "github/polca/pathways", "html_url": "https://rseng.github.io/software/repository/github/polca/pathways", "api_url": "https://rseng.github.io/software/api/repos/github/polca/pathways"}, {"uid": "github/polca/unfold", "html_url": "https://rseng.github.io/software/repository/github/polca/unfold", "api_url": "https://rseng.github.io/software/api/repos/github/polca/unfold"}, {"uid": "github/liulizhi1996/HPODNets", "html_url": "https://rseng.github.io/software/repository/github/liulizhi1996/HPODNets", "api_url": "https://rseng.github.io/software/api/repos/github/liulizhi1996/HPODNets"}, {"uid": "github/parsotat/batanalysis", "html_url": "https://rseng.github.io/software/repository/github/parsotat/batanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/parsotat/batanalysis"}, {"uid": "github/souradipp76/MM-PoE", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/MM-PoE", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/MM-PoE"}, {"uid": "github/souradipp76/ReadMeReady", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/ReadMeReady", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/ReadMeReady"}, {"uid": "github/Libsharp/libsharp", "html_url": "https://rseng.github.io/software/repository/github/Libsharp/libsharp", "api_url": "https://rseng.github.io/software/api/repos/github/Libsharp/libsharp"}, {"uid": "github/tensorlayer/tensorlayer", "html_url": "https://rseng.github.io/software/repository/github/tensorlayer/tensorlayer", "api_url": "https://rseng.github.io/software/api/repos/github/tensorlayer/tensorlayer"}, {"uid": "github/MRCIEU/metaboprep", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/metaboprep", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/metaboprep"}, {"uid": "github/MRCIEU/PHESANT", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/PHESANT", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/PHESANT"}, {"uid": "github/wullm/zwindstroom", "html_url": "https://rseng.github.io/software/repository/github/wullm/zwindstroom", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/zwindstroom"}, {"uid": "github/wullm/fastdf", "html_url": "https://rseng.github.io/software/repository/github/wullm/fastdf", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/fastdf"}, {"uid": "github/Cascella-Group-UiO/HyMD", "html_url": "https://rseng.github.io/software/repository/github/Cascella-Group-UiO/HyMD", "api_url": "https://rseng.github.io/software/api/repos/github/Cascella-Group-UiO/HyMD"}, {"uid": "github/Sm00thix/IKPLS", "html_url": "https://rseng.github.io/software/repository/github/Sm00thix/IKPLS", "api_url": "https://rseng.github.io/software/api/repos/github/Sm00thix/IKPLS"}, {"uid": "github/vferat/pycrostates", "html_url": "https://rseng.github.io/software/repository/github/vferat/pycrostates", "api_url": "https://rseng.github.io/software/api/repos/github/vferat/pycrostates"}, {"uid": "github/alexlewin24/BLSEM", "html_url": "https://rseng.github.io/software/repository/github/alexlewin24/BLSEM", "api_url": "https://rseng.github.io/software/api/repos/github/alexlewin24/BLSEM"}, {"uid": "github/msaland/THInCR-Suite", "html_url": "https://rseng.github.io/software/repository/github/msaland/THInCR-Suite", "api_url": "https://rseng.github.io/software/api/repos/github/msaland/THInCR-Suite"}, {"uid": "github/hfarias/mask_galaxy", "html_url": "https://rseng.github.io/software/repository/github/hfarias/mask_galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/hfarias/mask_galaxy"}, {"uid": "github/yukiteruono/pbsim2", "html_url": "https://rseng.github.io/software/repository/github/yukiteruono/pbsim2", "api_url": "https://rseng.github.io/software/api/repos/github/yukiteruono/pbsim2"}, {"uid": "github/hpc4cmb/toast", "html_url": "https://rseng.github.io/software/repository/github/hpc4cmb/toast", "api_url": "https://rseng.github.io/software/api/repos/github/hpc4cmb/toast"}, {"uid": "github/ucsbdeepspace/tripp_pipeline", "html_url": "https://rseng.github.io/software/repository/github/ucsbdeepspace/tripp_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ucsbdeepspace/tripp_pipeline"}, {"uid": "github/LSARP/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/LSARP/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/LSARP/ProteomicsQC"}, {"uid": "github/fredericlemoine/goalign", "html_url": "https://rseng.github.io/software/repository/github/fredericlemoine/goalign", "api_url": "https://rseng.github.io/software/api/repos/github/fredericlemoine/goalign"}, {"uid": "github/adrijd/beamconv", "html_url": "https://rseng.github.io/software/repository/github/adrijd/beamconv", "api_url": "https://rseng.github.io/software/api/repos/github/adrijd/beamconv"}, {"uid": "github/stefanradev93/BayesFlow", "html_url": "https://rseng.github.io/software/repository/github/stefanradev93/BayesFlow", "api_url": "https://rseng.github.io/software/api/repos/github/stefanradev93/BayesFlow"}, {"uid": "github/LeoEgidi/pivmet", "html_url": "https://rseng.github.io/software/repository/github/LeoEgidi/pivmet", "api_url": "https://rseng.github.io/software/api/repos/github/LeoEgidi/pivmet"}, {"uid": "github/project-lighter/lighter", "html_url": "https://rseng.github.io/software/repository/github/project-lighter/lighter", "api_url": "https://rseng.github.io/software/api/repos/github/project-lighter/lighter"}, {"uid": "github/opencobra/cobrapy", "html_url": "https://rseng.github.io/software/repository/github/opencobra/cobrapy", "api_url": "https://rseng.github.io/software/api/repos/github/opencobra/cobrapy"}, {"uid": "github/milanofthe/pathsim", "html_url": "https://rseng.github.io/software/repository/github/milanofthe/pathsim", "api_url": "https://rseng.github.io/software/api/repos/github/milanofthe/pathsim"}, {"uid": "github/hsergi/Roman_Coronagraph_ETC", "html_url": "https://rseng.github.io/software/repository/github/hsergi/Roman_Coronagraph_ETC", "api_url": "https://rseng.github.io/software/api/repos/github/hsergi/Roman_Coronagraph_ETC"}, {"uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "html_url": "https://rseng.github.io/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "api_url": "https://rseng.github.io/software/api/repos/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY"}, {"uid": "github/ymocquar/HOODESolver.jl", "html_url": "https://rseng.github.io/software/repository/github/ymocquar/HOODESolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ymocquar/HOODESolver.jl"}, {"uid": "github/StephenJHardy/SL1M", "html_url": "https://rseng.github.io/software/repository/github/StephenJHardy/SL1M", "api_url": "https://rseng.github.io/software/api/repos/github/StephenJHardy/SL1M"}, {"uid": "github/barklem/abo-cross", "html_url": "https://rseng.github.io/software/repository/github/barklem/abo-cross", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/abo-cross"}, {"uid": "github/barklem/mswavef", "html_url": "https://rseng.github.io/software/repository/github/barklem/mswavef", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/mswavef"}, {"uid": "github/barklem/kaulakys", "html_url": "https://rseng.github.io/software/repository/github/barklem/kaulakys", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/kaulakys"}, {"uid": "github/barklem/hlinop", "html_url": "https://rseng.github.io/software/repository/github/barklem/hlinop", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/hlinop"}, {"uid": "github/longfei8533/SDC", "html_url": "https://rseng.github.io/software/repository/github/longfei8533/SDC", "api_url": "https://rseng.github.io/software/api/repos/github/longfei8533/SDC"}, {"uid": "github/jjmccollum/teiphy", "html_url": "https://rseng.github.io/software/repository/github/jjmccollum/teiphy", "api_url": "https://rseng.github.io/software/api/repos/github/jjmccollum/teiphy"}, {"uid": "github/ryansmcgee/seirsplus", "html_url": "https://rseng.github.io/software/repository/github/ryansmcgee/seirsplus", "api_url": "https://rseng.github.io/software/api/repos/github/ryansmcgee/seirsplus"}, {"uid": "github/kdeck/TTVFast", "html_url": "https://rseng.github.io/software/repository/github/kdeck/TTVFast", "api_url": "https://rseng.github.io/software/api/repos/github/kdeck/TTVFast"}, {"uid": "github/danielapai/bioverse", "html_url": "https://rseng.github.io/software/repository/github/danielapai/bioverse", "api_url": "https://rseng.github.io/software/api/repos/github/danielapai/bioverse"}, {"uid": "github/astrostat/Automark", "html_url": "https://rseng.github.io/software/repository/github/astrostat/Automark", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/Automark"}, {"uid": "github/astrostat/LIRA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/LIRA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/LIRA"}, {"uid": "github/astrostat/BASCS", "html_url": "https://rseng.github.io/software/repository/github/astrostat/BASCS", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/BASCS"}, {"uid": "github/astrostat/TD-CARMA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/TD-CARMA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/TD-CARMA"}, {"uid": "github/vgteam/vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg"}, {"uid": "github/vgteam/vg#vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg#vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg#vg"}, {"uid": "github/bwengals/CCSNMultivar", "html_url": "https://rseng.github.io/software/repository/github/bwengals/CCSNMultivar", "api_url": "https://rseng.github.io/software/api/repos/github/bwengals/CCSNMultivar"}, {"uid": "github/HARMONI-ELT/HSIM", "html_url": "https://rseng.github.io/software/repository/github/HARMONI-ELT/HSIM", "api_url": "https://rseng.github.io/software/api/repos/github/HARMONI-ELT/HSIM"}, {"uid": "github/nickelnine37/pykronecker", "html_url": "https://rseng.github.io/software/repository/github/nickelnine37/pykronecker", "api_url": "https://rseng.github.io/software/api/repos/github/nickelnine37/pykronecker"}, {"uid": "github/parafields/parafields", "html_url": "https://rseng.github.io/software/repository/github/parafields/parafields", "api_url": "https://rseng.github.io/software/api/repos/github/parafields/parafields"}, {"uid": "github/luinix/pesco", "html_url": "https://rseng.github.io/software/repository/github/luinix/pesco", "api_url": "https://rseng.github.io/software/api/repos/github/luinix/pesco"}, {"uid": "github/bradkav/EarthScatterLikelihood", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthScatterLikelihood", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthScatterLikelihood"}, {"uid": "github/bradkav/DMRadon", "html_url": "https://rseng.github.io/software/repository/github/bradkav/DMRadon", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/DMRadon"}, {"uid": "github/bradkav/AntiparticleDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/AntiparticleDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/AntiparticleDM"}, {"uid": "github/bradkav/EarthShadow", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthShadow", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthShadow"}, {"uid": "github/bradkav/WIMpy_NREFT", "html_url": "https://rseng.github.io/software/repository/github/bradkav/WIMpy_NREFT", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/WIMpy_NREFT"}, {"uid": "github/bradkav/runDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/runDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/runDM"}, {"uid": "github/bradkav/CEvNS", "html_url": "https://rseng.github.io/software/repository/github/bradkav/CEvNS", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/CEvNS"}, {"uid": "github/bradkav/BlackHolesDarkDress", "html_url": "https://rseng.github.io/software/repository/github/bradkav/BlackHolesDarkDress", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/BlackHolesDarkDress"}, {"uid": "github/bradkav/verne", "html_url": "https://rseng.github.io/software/repository/github/bradkav/verne", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/verne"}, {"uid": "github/bradkav/NbodyIMRI", "html_url": "https://rseng.github.io/software/repository/github/bradkav/NbodyIMRI", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/NbodyIMRI"}, {"uid": "github/nlesc-nano/Moka", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/Moka", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/Moka"}, {"uid": "github/nlesc-nano/insilico-server", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/insilico-server", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/insilico-server"}, {"uid": "github/nlesc-nano/flamingo", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/flamingo", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/flamingo"}, {"uid": "github/nlesc-nano/CAT", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/CAT"}, {"uid": "github/nlesc-nano/ceiba-cli", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba-cli", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba-cli"}, {"uid": "github/nlesc-nano/swan", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/swan", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/swan"}, {"uid": "github/nlesc-nano/ceiba", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba"}, {"uid": "github/maxbernyk/lightcone", "html_url": "https://rseng.github.io/software/repository/github/maxbernyk/lightcone", "api_url": "https://rseng.github.io/software/api/repos/github/maxbernyk/lightcone"}, {"uid": "github/xiaofengsong/pHisPred", "html_url": "https://rseng.github.io/software/repository/github/xiaofengsong/pHisPred", "api_url": "https://rseng.github.io/software/api/repos/github/xiaofengsong/pHisPred"}, {"uid": "github/tardis-sn/carsus", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/carsus", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/carsus"}, {"uid": "github/tardis-sn/stardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/stardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/stardis"}, {"uid": "github/tardis-sn/tardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/tardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/tardis"}, {"uid": "github/medbioinf/macpepdb-frontend", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/macpepdb-frontend", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/macpepdb-frontend"}, {"uid": "github/medbioinf/pia", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/pia", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/pia"}, {"uid": "github/desmid/mview", "html_url": "https://rseng.github.io/software/repository/github/desmid/mview", "api_url": "https://rseng.github.io/software/api/repos/github/desmid/mview"}, {"uid": "github/aL3x-O-o-Hung/CAT-Net", "html_url": "https://rseng.github.io/software/repository/github/aL3x-O-o-Hung/CAT-Net", "api_url": "https://rseng.github.io/software/api/repos/github/aL3x-O-o-Hung/CAT-Net"}, {"uid": "github/robin-janssen/CODES-Benchmark", "html_url": "https://rseng.github.io/software/repository/github/robin-janssen/CODES-Benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/robin-janssen/CODES-Benchmark"}, {"uid": "github/rhdtownsend/gyre", "html_url": "https://rseng.github.io/software/repository/github/rhdtownsend/gyre", "api_url": "https://rseng.github.io/software/api/repos/github/rhdtownsend/gyre"}, {"uid": "github/snek5000/snek5000", "html_url": "https://rseng.github.io/software/repository/github/snek5000/snek5000", "api_url": "https://rseng.github.io/software/api/repos/github/snek5000/snek5000"}, {"uid": "github/ijuric/MAPS", "html_url": "https://rseng.github.io/software/repository/github/ijuric/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/ijuric/MAPS"}, {"uid": "github/gaelforget/MITgcm.jl", "html_url": "https://rseng.github.io/software/repository/github/gaelforget/MITgcm.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gaelforget/MITgcm.jl"}, {"uid": "github/astrom-tom/dfitspy", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/dfitspy", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/dfitspy"}, {"uid": "github/astrom-tom/specstack", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/specstack", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/specstack"}, {"uid": "github/numpy/numpy", "html_url": "https://rseng.github.io/software/repository/github/numpy/numpy", "api_url": "https://rseng.github.io/software/api/repos/github/numpy/numpy"}, {"uid": "github/SegataLab/lefse", "html_url": "https://rseng.github.io/software/repository/github/SegataLab/lefse", "api_url": "https://rseng.github.io/software/api/repos/github/SegataLab/lefse"}, {"uid": "github/s4hts/HTStream", "html_url": "https://rseng.github.io/software/repository/github/s4hts/HTStream", "api_url": "https://rseng.github.io/software/api/repos/github/s4hts/HTStream"}, {"uid": "github/hallamlab/TreeSAPP", "html_url": "https://rseng.github.io/software/repository/github/hallamlab/TreeSAPP", "api_url": "https://rseng.github.io/software/api/repos/github/hallamlab/TreeSAPP"}, {"uid": "github/MouseLand/cellpose", "html_url": "https://rseng.github.io/software/repository/github/MouseLand/cellpose", "api_url": "https://rseng.github.io/software/api/repos/github/MouseLand/cellpose"}, {"uid": "github/ismaelpessa/PyMUSE", "html_url": "https://rseng.github.io/software/repository/github/ismaelpessa/PyMUSE", "api_url": "https://rseng.github.io/software/api/repos/github/ismaelpessa/PyMUSE"}, {"uid": "github/bwoshea/ZEUS-MP_2", "html_url": "https://rseng.github.io/software/repository/github/bwoshea/ZEUS-MP_2", "api_url": "https://rseng.github.io/software/api/repos/github/bwoshea/ZEUS-MP_2"}, {"uid": "github/DOnghiaGroup/MGwave", "html_url": "https://rseng.github.io/software/repository/github/DOnghiaGroup/MGwave", "api_url": "https://rseng.github.io/software/api/repos/github/DOnghiaGroup/MGwave"}, {"uid": "github/theLongLab/CATE", "html_url": "https://rseng.github.io/software/repository/github/theLongLab/CATE", "api_url": "https://rseng.github.io/software/api/repos/github/theLongLab/CATE"}, {"uid": "github/devitocodes/devito", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/devito", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/devito"}, {"uid": "github/devitocodes/pyrevolve", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/pyrevolve", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/pyrevolve"}, {"uid": "github/aranyics/ReDCM", "html_url": "https://rseng.github.io/software/repository/github/aranyics/ReDCM", "api_url": "https://rseng.github.io/software/api/repos/github/aranyics/ReDCM"}, {"uid": "github/siminegroup/E2EDNA2", "html_url": "https://rseng.github.io/software/repository/github/siminegroup/E2EDNA2", "api_url": "https://rseng.github.io/software/api/repos/github/siminegroup/E2EDNA2"}, {"uid": "github/AnthonyOfSeattle/pyAscoreValidation", "html_url": "https://rseng.github.io/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", "api_url": "https://rseng.github.io/software/api/repos/github/AnthonyOfSeattle/pyAscoreValidation"}, {"uid": "github/nick-youngblut/gtdb_to_taxdump", "html_url": "https://rseng.github.io/software/repository/github/nick-youngblut/gtdb_to_taxdump", "api_url": "https://rseng.github.io/software/api/repos/github/nick-youngblut/gtdb_to_taxdump"}, {"uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", "html_url": "https://rseng.github.io/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", "api_url": "https://rseng.github.io/software/api/repos/github/Critical-Infrastructure-Systems-Lab/PowNet"}, {"uid": "github/nu-radio/NuRadioMC", "html_url": "https://rseng.github.io/software/repository/github/nu-radio/NuRadioMC", "api_url": "https://rseng.github.io/software/api/repos/github/nu-radio/NuRadioMC"}, {"uid": "github/usnistgov/imppy3d", "html_url": "https://rseng.github.io/software/repository/github/usnistgov/imppy3d", "api_url": "https://rseng.github.io/software/api/repos/github/usnistgov/imppy3d"}, {"uid": "github/csabiu/kstat", "html_url": "https://rseng.github.io/software/repository/github/csabiu/kstat", "api_url": "https://rseng.github.io/software/api/repos/github/csabiu/kstat"}, {"uid": "github/jdcphysics/validation", "html_url": "https://rseng.github.io/software/repository/github/jdcphysics/validation", "api_url": "https://rseng.github.io/software/api/repos/github/jdcphysics/validation"}, {"uid": "github/jpuritz/dDocent", "html_url": "https://rseng.github.io/software/repository/github/jpuritz/dDocent", "api_url": "https://rseng.github.io/software/api/repos/github/jpuritz/dDocent"}, {"uid": "github/SJLeo/FFSD", "html_url": "https://rseng.github.io/software/repository/github/SJLeo/FFSD", "api_url": "https://rseng.github.io/software/api/repos/github/SJLeo/FFSD"}, {"uid": "github/MayaWaves/mayawaves", "html_url": "https://rseng.github.io/software/repository/github/MayaWaves/mayawaves", "api_url": "https://rseng.github.io/software/api/repos/github/MayaWaves/mayawaves"}, {"uid": "github/mwalmsley/zoobot", "html_url": "https://rseng.github.io/software/repository/github/mwalmsley/zoobot", "api_url": "https://rseng.github.io/software/api/repos/github/mwalmsley/zoobot"}, {"uid": "github/Lindt8/PHITS-Tools", "html_url": "https://rseng.github.io/software/repository/github/Lindt8/PHITS-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/Lindt8/PHITS-Tools"}, {"uid": "github/sfeeney/ddspectra", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/ddspectra", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/ddspectra"}, {"uid": "github/sfeeney/hh0", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/hh0", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/hh0"}, {"uid": "github/swagnercarena/ovejero", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/ovejero", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/ovejero"}, {"uid": "github/swagnercarena/paltas", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/paltas", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/paltas"}, {"uid": "github/idem-lab/conmat", "html_url": "https://rseng.github.io/software/repository/github/idem-lab/conmat", "api_url": "https://rseng.github.io/software/api/repos/github/idem-lab/conmat"}, {"uid": "github/jeremysanders/ggm", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/ggm", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/ggm"}, {"uid": "github/jeremysanders/xspec_emcee", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/xspec_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/xspec_emcee"}, {"uid": "github/jeremysanders/contbin", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/contbin", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/contbin"}, {"uid": "github/jeremysanders/dsdeproj", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/dsdeproj", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/dsdeproj"}, {"uid": "github/jeremysanders/spex_to_xspec", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/spex_to_xspec", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/spex_to_xspec"}, {"uid": "github/jeremysanders/mbproj2", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/mbproj2", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/mbproj2"}, {"uid": "github/KonstantinLeyde/light", "html_url": "https://rseng.github.io/software/repository/github/KonstantinLeyde/light", "api_url": "https://rseng.github.io/software/api/repos/github/KonstantinLeyde/light"}, {"uid": "github/jiangyuts/facetclumps", "html_url": "https://rseng.github.io/software/repository/github/jiangyuts/facetclumps", "api_url": "https://rseng.github.io/software/api/repos/github/jiangyuts/facetclumps"}, {"uid": "github/vedantchandra/wdtools", "html_url": "https://rseng.github.io/software/repository/github/vedantchandra/wdtools", "api_url": "https://rseng.github.io/software/api/repos/github/vedantchandra/wdtools"}, {"uid": "github/OpenGene/fastplong", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastplong", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastplong"}, {"uid": "github/OpenGene/fastv", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastv", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastv"}, {"uid": "github/OpenGene/fastp", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastp", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastp"}, {"uid": "github/OpenGene/repaq", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/repaq", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/repaq"}, {"uid": "github/Balaje/iceFem", "html_url": "https://rseng.github.io/software/repository/github/Balaje/iceFem", "api_url": "https://rseng.github.io/software/api/repos/github/Balaje/iceFem"}, {"uid": "github/ropensci-archive/monkeylearn", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/monkeylearn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/monkeylearn"}, {"uid": "github/ropensci-archive/rodev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/rodev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/rodev"}, {"uid": "github/ropensci-archive/arresteddev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/arresteddev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/arresteddev"}, {"uid": "github/ropensci-archive/reviewer", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/reviewer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/reviewer"}, {"uid": "github/nasa/simupy-flight", "html_url": "https://rseng.github.io/software/repository/github/nasa/simupy-flight", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/simupy-flight"}, {"uid": "github/nasa/ncompare", "html_url": "https://rseng.github.io/software/repository/github/nasa/ncompare", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/ncompare"}, {"uid": "github/nasa/kepler-robovetter", "html_url": "https://rseng.github.io/software/repository/github/nasa/kepler-robovetter", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/kepler-robovetter"}, {"uid": "github/nasa/exoscene", "html_url": "https://rseng.github.io/software/repository/github/nasa/exoscene", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/exoscene"}, {"uid": "github/nasa/Kamodo", "html_url": "https://rseng.github.io/software/repository/github/nasa/Kamodo", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/Kamodo"}, {"uid": "github/nasa/KeplerPORTs", "html_url": "https://rseng.github.io/software/repository/github/nasa/KeplerPORTs", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/KeplerPORTs"}, {"uid": "github/nasa/prog_models", "html_url": "https://rseng.github.io/software/repository/github/nasa/prog_models", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/prog_models"}, {"uid": "github/nasa/K2CE", "html_url": "https://rseng.github.io/software/repository/github/nasa/K2CE", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/K2CE"}, {"uid": "github/RavenGan/GR2D2", "html_url": "https://rseng.github.io/software/repository/github/RavenGan/GR2D2", "api_url": "https://rseng.github.io/software/api/repos/github/RavenGan/GR2D2"}, {"uid": "github/nworbde/dStar", "html_url": "https://rseng.github.io/software/repository/github/nworbde/dStar", "api_url": "https://rseng.github.io/software/api/repos/github/nworbde/dStar"}, {"uid": "github/jean-pierreBoth/gsearch", "html_url": "https://rseng.github.io/software/repository/github/jean-pierreBoth/gsearch", "api_url": "https://rseng.github.io/software/api/repos/github/jean-pierreBoth/gsearch"}, {"uid": "github/labsquare/CutePeaks", "html_url": "https://rseng.github.io/software/repository/github/labsquare/CutePeaks", "api_url": "https://rseng.github.io/software/api/repos/github/labsquare/CutePeaks"}, {"uid": "github/fritzsedlazeck/Sniffles", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/Sniffles", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/Sniffles"}, {"uid": "github/fritzsedlazeck/SURVIVOR", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/SURVIVOR", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/SURVIVOR"}, {"uid": "github/BIC-MNI/libminc", "html_url": "https://rseng.github.io/software/repository/github/BIC-MNI/libminc", "api_url": "https://rseng.github.io/software/api/repos/github/BIC-MNI/libminc"}, {"uid": "github/cameron314/concurrentqueue", "html_url": "https://rseng.github.io/software/repository/github/cameron314/concurrentqueue", "api_url": "https://rseng.github.io/software/api/repos/github/cameron314/concurrentqueue"}, {"uid": "github/SSDataLab/vetting", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/vetting", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/vetting"}, {"uid": "github/SSDataLab/psfmachine", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/psfmachine", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/psfmachine"}, {"uid": "github/martibosch/detectree", "html_url": "https://rseng.github.io/software/repository/github/martibosch/detectree", "api_url": "https://rseng.github.io/software/api/repos/github/martibosch/detectree"}, {"uid": "github/soerenslarsen/ISPy3", "html_url": "https://rseng.github.io/software/repository/github/soerenslarsen/ISPy3", "api_url": "https://rseng.github.io/software/api/repos/github/soerenslarsen/ISPy3"}, {"uid": "github/jcorbino/mole", "html_url": "https://rseng.github.io/software/repository/github/jcorbino/mole", "api_url": "https://rseng.github.io/software/api/repos/github/jcorbino/mole"}, {"uid": "github/bokulich-lab/q2-fondue", "html_url": "https://rseng.github.io/software/repository/github/bokulich-lab/q2-fondue", "api_url": "https://rseng.github.io/software/api/repos/github/bokulich-lab/q2-fondue"}, {"uid": "github/bruce-chappell/SunnyNet", "html_url": "https://rseng.github.io/software/repository/github/bruce-chappell/SunnyNet", "api_url": "https://rseng.github.io/software/api/repos/github/bruce-chappell/SunnyNet"}, {"uid": "github/spacetx/starfish", "html_url": "https://rseng.github.io/software/repository/github/spacetx/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/spacetx/starfish"}, {"uid": "github/izsvenezie-virology/FluMut", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/FluMut", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/FluMut"}, {"uid": "github/izsvenezie-virology/genin2", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/genin2", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/genin2"}, {"uid": "github/LMBooth/pybci", "html_url": "https://rseng.github.io/software/repository/github/LMBooth/pybci", "api_url": "https://rseng.github.io/software/api/repos/github/LMBooth/pybci"}, {"uid": "github/lazzati-astro/MCRaT", "html_url": "https://rseng.github.io/software/repository/github/lazzati-astro/MCRaT", "api_url": "https://rseng.github.io/software/api/repos/github/lazzati-astro/MCRaT"}, {"uid": "github/TNOCS/csWeb", "html_url": "https://rseng.github.io/software/repository/github/TNOCS/csWeb", "api_url": "https://rseng.github.io/software/api/repos/github/TNOCS/csWeb"}, {"uid": "github/FaaSr/FaaSr-package", "html_url": "https://rseng.github.io/software/repository/github/FaaSr/FaaSr-package", "api_url": "https://rseng.github.io/software/api/repos/github/FaaSr/FaaSr-package"}, {"uid": "github/markblokpoel/mathlib", "html_url": "https://rseng.github.io/software/repository/github/markblokpoel/mathlib", "api_url": "https://rseng.github.io/software/api/repos/github/markblokpoel/mathlib"}, {"uid": "github/ChrisBoettner/skaro", "html_url": "https://rseng.github.io/software/repository/github/ChrisBoettner/skaro", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBoettner/skaro"}, {"uid": "github/asancpt/caffsim", "html_url": "https://rseng.github.io/software/repository/github/asancpt/caffsim", "api_url": "https://rseng.github.io/software/api/repos/github/asancpt/caffsim"}, {"uid": "github/brandonckelly/carma_pack", "html_url": "https://rseng.github.io/software/repository/github/brandonckelly/carma_pack", "api_url": "https://rseng.github.io/software/api/repos/github/brandonckelly/carma_pack"}, {"uid": "github/ECP-WarpX/WarpX", "html_url": "https://rseng.github.io/software/repository/github/ECP-WarpX/WarpX", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-WarpX/WarpX"}, {"uid": "github/glass-dev/glass", "html_url": "https://rseng.github.io/software/repository/github/glass-dev/glass", "api_url": "https://rseng.github.io/software/api/repos/github/glass-dev/glass"}, {"uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "html_url": "https://rseng.github.io/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "api_url": "https://rseng.github.io/software/api/repos/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs"}, {"uid": "github/abmantz/lrgs", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lrgs", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lrgs"}, {"uid": "github/abmantz/lmc", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lmc", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lmc"}, {"uid": "github/abmantz/rgw", "html_url": "https://rseng.github.io/software/repository/github/abmantz/rgw", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/rgw"}, {"uid": "github/kritiyer/AngioNet", "html_url": "https://rseng.github.io/software/repository/github/kritiyer/AngioNet", "api_url": "https://rseng.github.io/software/api/repos/github/kritiyer/AngioNet"}, {"uid": "github/mavrix93/LightCurvesClassifier", "html_url": "https://rseng.github.io/software/repository/github/mavrix93/LightCurvesClassifier", "api_url": "https://rseng.github.io/software/api/repos/github/mavrix93/LightCurvesClassifier"}, {"uid": "github/rnikutta/rhocube", "html_url": "https://rseng.github.io/software/repository/github/rnikutta/rhocube", "api_url": "https://rseng.github.io/software/api/repos/github/rnikutta/rhocube"}, {"uid": "github/soundata/soundata", "html_url": "https://rseng.github.io/software/repository/github/soundata/soundata", "api_url": "https://rseng.github.io/software/api/repos/github/soundata/soundata"}, {"uid": "github/Rocsg/FijiRelax", "html_url": "https://rseng.github.io/software/repository/github/Rocsg/FijiRelax", "api_url": "https://rseng.github.io/software/api/repos/github/Rocsg/FijiRelax"}, {"uid": "github/TARGENE/TMLE.jl", "html_url": "https://rseng.github.io/software/repository/github/TARGENE/TMLE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TARGENE/TMLE.jl"}, {"uid": "github/liulei/volks2", "html_url": "https://rseng.github.io/software/repository/github/liulei/volks2", "api_url": "https://rseng.github.io/software/api/repos/github/liulei/volks2"}, {"uid": "github/davek44/Glimmer-MG", "html_url": "https://rseng.github.io/software/repository/github/davek44/Glimmer-MG", "api_url": "https://rseng.github.io/software/api/repos/github/davek44/Glimmer-MG"}, {"uid": "github/myinxd/mcrgnet", "html_url": "https://rseng.github.io/software/repository/github/myinxd/mcrgnet", "api_url": "https://rseng.github.io/software/api/repos/github/myinxd/mcrgnet"}, {"uid": "github/AKHughes1994/polkat", "html_url": "https://rseng.github.io/software/repository/github/AKHughes1994/polkat", "api_url": "https://rseng.github.io/software/api/repos/github/AKHughes1994/polkat"}, {"uid": "github/ester-project/ester", "html_url": "https://rseng.github.io/software/repository/github/ester-project/ester", "api_url": "https://rseng.github.io/software/api/repos/github/ester-project/ester"}, {"uid": "github/OnroerendErfgoed/atramhasis", "html_url": "https://rseng.github.io/software/repository/github/OnroerendErfgoed/atramhasis", "api_url": "https://rseng.github.io/software/api/repos/github/OnroerendErfgoed/atramhasis"}, {"uid": "github/mmahmoudian/sivs", "html_url": "https://rseng.github.io/software/repository/github/mmahmoudian/sivs", "api_url": "https://rseng.github.io/software/api/repos/github/mmahmoudian/sivs"}, {"uid": "github/catherinezucker/radfil", "html_url": "https://rseng.github.io/software/repository/github/catherinezucker/radfil", "api_url": "https://rseng.github.io/software/api/repos/github/catherinezucker/radfil"}, {"uid": "github/GEUS-Glaciology-and-Climate/GrIML", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/GrIML"}, {"uid": "github/GEUS-Glaciology-and-Climate/pypromice", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/pypromice"}, {"uid": "github/IanHeywood/pony3d", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/pony3d", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/pony3d"}, {"uid": "github/IanHeywood/oxkat", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/oxkat", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/oxkat"}, {"uid": "github/wilkelab/Opfi", "html_url": "https://rseng.github.io/software/repository/github/wilkelab/Opfi", "api_url": "https://rseng.github.io/software/api/repos/github/wilkelab/Opfi"}, {"uid": "github/MDAnalysis/mdanalysis", "html_url": "https://rseng.github.io/software/repository/github/MDAnalysis/mdanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/MDAnalysis/mdanalysis"}, {"uid": "github/mourisl/Lighter", "html_url": "https://rseng.github.io/software/repository/github/mourisl/Lighter", "api_url": "https://rseng.github.io/software/api/repos/github/mourisl/Lighter"}, {"uid": "github/Chroma-CITI/namosim", "html_url": "https://rseng.github.io/software/repository/github/Chroma-CITI/namosim", "api_url": "https://rseng.github.io/software/api/repos/github/Chroma-CITI/namosim"}, {"uid": "github/MetazoaPhylogenomicsLab/FANTASIA", "html_url": "https://rseng.github.io/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", "api_url": "https://rseng.github.io/software/api/repos/github/MetazoaPhylogenomicsLab/FANTASIA"}, {"uid": "github/mbursa/disk-models", "html_url": "https://rseng.github.io/software/repository/github/mbursa/disk-models", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/disk-models"}, {"uid": "github/mbursa/sim5", "html_url": "https://rseng.github.io/software/repository/github/mbursa/sim5", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/sim5"}, {"uid": "github/davidhoksza/traveler", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/traveler", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/traveler"}, {"uid": "github/davidhoksza/MolArt", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/MolArt", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/MolArt"}, {"uid": "github/biocore/deblur", "html_url": "https://rseng.github.io/software/repository/github/biocore/deblur", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/deblur"}, {"uid": "github/biocore/unifrac-binaries", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac-binaries", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac-binaries"}, {"uid": "github/biocore/scikit-bio", "html_url": "https://rseng.github.io/software/repository/github/biocore/scikit-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/scikit-bio"}, {"uid": "github/biocore/unifrac", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac"}, {"uid": "github/biocore/emperor", "html_url": "https://rseng.github.io/software/repository/github/biocore/emperor", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/emperor"}, {"uid": "github/biocore/sortmerna", "html_url": "https://rseng.github.io/software/repository/github/biocore/sortmerna", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/sortmerna"}, {"uid": "github/matthiaslee/Xmatch", "html_url": "https://rseng.github.io/software/repository/github/matthiaslee/Xmatch", "api_url": "https://rseng.github.io/software/api/repos/github/matthiaslee/Xmatch"}, {"uid": "github/ageorgakakis/StructureFunction", "html_url": "https://rseng.github.io/software/repository/github/ageorgakakis/StructureFunction", "api_url": "https://rseng.github.io/software/api/repos/github/ageorgakakis/StructureFunction"}, {"uid": "github/cnellington/Contextualized", "html_url": "https://rseng.github.io/software/repository/github/cnellington/Contextualized", "api_url": "https://rseng.github.io/software/api/repos/github/cnellington/Contextualized"}, {"uid": "github/solids4foam/solids4foam", "html_url": "https://rseng.github.io/software/repository/github/solids4foam/solids4foam", "api_url": "https://rseng.github.io/software/api/repos/github/solids4foam/solids4foam"}, {"uid": "github/matteolucchini1/BHJet", "html_url": "https://rseng.github.io/software/repository/github/matteolucchini1/BHJet", "api_url": "https://rseng.github.io/software/api/repos/github/matteolucchini1/BHJet"}, {"uid": "github/maps-as-data/MapReader", "html_url": "https://rseng.github.io/software/repository/github/maps-as-data/MapReader", "api_url": "https://rseng.github.io/software/api/repos/github/maps-as-data/MapReader"}, {"uid": "github/aobr/gsf", "html_url": "https://rseng.github.io/software/repository/github/aobr/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/aobr/gsf"}, {"uid": "github/NKI-CCB/PRECISE", "html_url": "https://rseng.github.io/software/repository/github/NKI-CCB/PRECISE", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-CCB/PRECISE"}, {"uid": "github/mtakahiro/gsf", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/gsf"}, {"uid": "github/mtakahiro/bbpn", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/bbpn", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/bbpn"}, {"uid": "github/4pisky/fourpisky-core", "html_url": "https://rseng.github.io/software/repository/github/4pisky/fourpisky-core", "api_url": "https://rseng.github.io/software/api/repos/github/4pisky/fourpisky-core"}, {"uid": "github/SophieMLV/axionHMcode", "html_url": "https://rseng.github.io/software/repository/github/SophieMLV/axionHMcode", "api_url": "https://rseng.github.io/software/api/repos/github/SophieMLV/axionHMcode"}, {"uid": "github/CompNet/Renard", "html_url": "https://rseng.github.io/software/repository/github/CompNet/Renard", "api_url": "https://rseng.github.io/software/api/repos/github/CompNet/Renard"}, {"uid": "github/BorgwardtLab/simbsig", "html_url": "https://rseng.github.io/software/repository/github/BorgwardtLab/simbsig", "api_url": "https://rseng.github.io/software/api/repos/github/BorgwardtLab/simbsig"}, {"uid": "github/devnums/pyheartlib", "html_url": "https://rseng.github.io/software/repository/github/devnums/pyheartlib", "api_url": "https://rseng.github.io/software/api/repos/github/devnums/pyheartlib"}, {"uid": "github/anderslogg/geco", "html_url": "https://rseng.github.io/software/repository/github/anderslogg/geco", "api_url": "https://rseng.github.io/software/api/repos/github/anderslogg/geco"}, {"uid": "github/rorybarnes/EqTide", "html_url": "https://rseng.github.io/software/repository/github/rorybarnes/EqTide", "api_url": "https://rseng.github.io/software/api/repos/github/rorybarnes/EqTide"}, {"uid": "github/kcleal/gw", "html_url": "https://rseng.github.io/software/repository/github/kcleal/gw", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/gw"}, {"uid": "github/kcleal/dysgu", "html_url": "https://rseng.github.io/software/repository/github/kcleal/dysgu", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/dysgu"}, {"uid": "github/chenjj2/forecaster", "html_url": "https://rseng.github.io/software/repository/github/chenjj2/forecaster", "api_url": "https://rseng.github.io/software/api/repos/github/chenjj2/forecaster"}, {"uid": "github/PlanetHunters/tkmatrix", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/tkmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/tkmatrix"}, {"uid": "github/PlanetHunters/watson", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/watson", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/watson"}, {"uid": "github/clwainwright/CosmoTransitions", "html_url": "https://rseng.github.io/software/repository/github/clwainwright/CosmoTransitions", "api_url": "https://rseng.github.io/software/api/repos/github/clwainwright/CosmoTransitions"}, {"uid": "github/SchedMD/slurm", "html_url": "https://rseng.github.io/software/repository/github/SchedMD/slurm", "api_url": "https://rseng.github.io/software/api/repos/github/SchedMD/slurm"}, {"uid": "github/DorianDepriester/mtex2Gmsh", "html_url": "https://rseng.github.io/software/repository/github/DorianDepriester/mtex2Gmsh", "api_url": "https://rseng.github.io/software/api/repos/github/DorianDepriester/mtex2Gmsh"}, {"uid": "github/motu-tool/mOTUs", "html_url": "https://rseng.github.io/software/repository/github/motu-tool/mOTUs", "api_url": "https://rseng.github.io/software/api/repos/github/motu-tool/mOTUs"}, {"uid": "github/FourierFlows/GeophysicalFlows.jl", "html_url": "https://rseng.github.io/software/repository/github/FourierFlows/GeophysicalFlows.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FourierFlows/GeophysicalFlows.jl"}, {"uid": "github/upb-lea/gym-electric-motor", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/gym-electric-motor", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/gym-electric-motor"}, {"uid": "github/upb-lea/ElectricGrid.jl", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/ElectricGrid.jl", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/ElectricGrid.jl"}, {"uid": "github/upb-lea/openmodelica-microgrid-gym", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/openmodelica-microgrid-gym", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/openmodelica-microgrid-gym"}, {"uid": "github/Schulik/aiolos", "html_url": "https://rseng.github.io/software/repository/github/Schulik/aiolos", "api_url": "https://rseng.github.io/software/api/repos/github/Schulik/aiolos"}, {"uid": "github/astropy/astroquery", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroquery", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroquery"}, {"uid": "github/astropy/astropy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astropy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astropy"}, {"uid": "github/astropy/astroplan", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroplan", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroplan"}, {"uid": "github/astropy/SPISEA", "html_url": "https://rseng.github.io/software/repository/github/astropy/SPISEA", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/SPISEA"}, {"uid": "github/astropy/halotools", "html_url": "https://rseng.github.io/software/repository/github/astropy/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/halotools"}, {"uid": "github/astropy/specutils", "html_url": "https://rseng.github.io/software/repository/github/astropy/specutils", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/specutils"}, {"uid": "github/astropy/astroscrappy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroscrappy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroscrappy"}, {"uid": "github/astropy/ccdproc", "html_url": "https://rseng.github.io/software/repository/github/astropy/ccdproc", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/ccdproc"}, {"uid": "github/Tomoaki-Ishiyama/mpi-rockstar", "html_url": "https://rseng.github.io/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", "api_url": "https://rseng.github.io/software/api/repos/github/Tomoaki-Ishiyama/mpi-rockstar"}, {"uid": "github/gtayana/CVRMS", "html_url": "https://rseng.github.io/software/repository/github/gtayana/CVRMS", "api_url": "https://rseng.github.io/software/api/repos/github/gtayana/CVRMS"}, {"uid": "github/ORNL/icat", "html_url": "https://rseng.github.io/software/repository/github/ORNL/icat", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/icat"}, {"uid": "github/ORNL/AdditiveFOAM", "html_url": "https://rseng.github.io/software/repository/github/ORNL/AdditiveFOAM", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/AdditiveFOAM"}, {"uid": "github/ORNL/tx2", "html_url": "https://rseng.github.io/software/repository/github/ORNL/tx2", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/tx2"}, {"uid": "github/ORNL/curifactory", "html_url": "https://rseng.github.io/software/repository/github/ORNL/curifactory", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/curifactory"}, {"uid": "github/ORNL/Equilipy", "html_url": "https://rseng.github.io/software/repository/github/ORNL/Equilipy", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/Equilipy"}, {"uid": "github/biomedia-mira/istn", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/istn", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/istn"}, {"uid": "github/biomedia-mira/masf", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/masf", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/masf"}, {"uid": "github/biomedia-mira/deepscm", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/deepscm", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/deepscm"}, {"uid": "github/biomedia-mira/drop2", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/drop2", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/drop2"}, {"uid": "github/biomedia-mira/blast-ct", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/blast-ct", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/blast-ct"}, {"uid": "github/NKI-AI/direct", "html_url": "https://rseng.github.io/software/repository/github/NKI-AI/direct", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-AI/direct"}, {"uid": "github/e-mental-health/data-processing", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/data-processing", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/data-processing"}, {"uid": "github/e-mental-health/orange-hackathon", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/orange-hackathon", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/orange-hackathon"}, {"uid": "github/bulik/ldsc", "html_url": "https://rseng.github.io/software/repository/github/bulik/ldsc", "api_url": "https://rseng.github.io/software/api/repos/github/bulik/ldsc"}, {"uid": "github/mkunimoto/LEO-vetter", "html_url": "https://rseng.github.io/software/repository/github/mkunimoto/LEO-vetter", "api_url": "https://rseng.github.io/software/api/repos/github/mkunimoto/LEO-vetter"}, {"uid": "github/alvinxhan/Phydelity", "html_url": "https://rseng.github.io/software/repository/github/alvinxhan/Phydelity", "api_url": "https://rseng.github.io/software/api/repos/github/alvinxhan/Phydelity"}, {"uid": "github/james-m-osborn/astrosat", "html_url": "https://rseng.github.io/software/repository/github/james-m-osborn/astrosat", "api_url": "https://rseng.github.io/software/api/repos/github/james-m-osborn/astrosat"}, {"uid": "github/MaudeDavidLab/GMEmbeddings", "html_url": "https://rseng.github.io/software/repository/github/MaudeDavidLab/GMEmbeddings", "api_url": "https://rseng.github.io/software/api/repos/github/MaudeDavidLab/GMEmbeddings"}, {"uid": "github/svi-opensource/libics", "html_url": "https://rseng.github.io/software/repository/github/svi-opensource/libics", "api_url": "https://rseng.github.io/software/api/repos/github/svi-opensource/libics"}, {"uid": "github/lys-devel/lys", "html_url": "https://rseng.github.io/software/repository/github/lys-devel/lys", "api_url": "https://rseng.github.io/software/api/repos/github/lys-devel/lys"}, {"uid": "github/pennucci/PulsePortraiture", "html_url": "https://rseng.github.io/software/repository/github/pennucci/PulsePortraiture", "api_url": "https://rseng.github.io/software/api/repos/github/pennucci/PulsePortraiture"}, {"uid": "github/spastras/galclass", "html_url": "https://rseng.github.io/software/repository/github/spastras/galclass", "api_url": "https://rseng.github.io/software/api/repos/github/spastras/galclass"}, {"uid": "github/nkallima/sim-universal-construction", "html_url": "https://rseng.github.io/software/repository/github/nkallima/sim-universal-construction", "api_url": "https://rseng.github.io/software/api/repos/github/nkallima/sim-universal-construction"}, {"uid": "github/ecological-cities/home2park", "html_url": "https://rseng.github.io/software/repository/github/ecological-cities/home2park", "api_url": "https://rseng.github.io/software/api/repos/github/ecological-cities/home2park"}, {"uid": "github/vinisalazar/metaphor", "html_url": "https://rseng.github.io/software/repository/github/vinisalazar/metaphor", "api_url": "https://rseng.github.io/software/api/repos/github/vinisalazar/metaphor"}, {"uid": "github/VicidominiLab/BrightEyes-MCS", "html_url": "https://rseng.github.io/software/repository/github/VicidominiLab/BrightEyes-MCS", "api_url": "https://rseng.github.io/software/api/repos/github/VicidominiLab/BrightEyes-MCS"}, {"uid": "github/saopicc/DDFacet", "html_url": "https://rseng.github.io/software/repository/github/saopicc/DDFacet", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/DDFacet"}, {"uid": "github/saopicc/killMS", "html_url": "https://rseng.github.io/software/repository/github/saopicc/killMS", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/killMS"}, {"uid": "github/cjcollin37/IsoFATE", "html_url": "https://rseng.github.io/software/repository/github/cjcollin37/IsoFATE", "api_url": "https://rseng.github.io/software/api/repos/github/cjcollin37/IsoFATE"}, {"uid": "github/simon-smart88/shinyscholar", "html_url": "https://rseng.github.io/software/repository/github/simon-smart88/shinyscholar", "api_url": "https://rseng.github.io/software/api/repos/github/simon-smart88/shinyscholar"}, {"uid": "github/astro-informatics/s2fft", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2fft", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2fft"}, {"uid": "github/astro-informatics/s2", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2"}, {"uid": "github/astro-informatics/sleplet", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/sleplet", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/sleplet"}, {"uid": "github/astro-informatics/QuantifAI", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/QuantifAI", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/QuantifAI"}, {"uid": "github/astro-informatics/massmappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/massmappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/massmappy"}, {"uid": "github/astro-informatics/flag-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flag-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flag-archive"}, {"uid": "github/astro-informatics/ssht", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/ssht", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/ssht"}, {"uid": "github/astro-informatics/harmonic", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/harmonic", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/harmonic"}, {"uid": "github/astro-informatics/DarkMappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/DarkMappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/DarkMappy"}, {"uid": "github/astro-informatics/comb", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/comb", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/comb"}, {"uid": "github/astro-informatics/s2let", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2let", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2let"}, {"uid": "github/astro-informatics/stringgen", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/stringgen", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/stringgen"}, {"uid": "github/astro-informatics/RequiSim", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/RequiSim", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/RequiSim"}, {"uid": "github/astro-informatics/flaglet-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flaglet-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flaglet-archive"}, {"uid": "github/AgrDataSci/climatrends", "html_url": "https://rseng.github.io/software/repository/github/AgrDataSci/climatrends", "api_url": "https://rseng.github.io/software/api/repos/github/AgrDataSci/climatrends"}, {"uid": "github/vojtech-sidorin/quickclump", "html_url": "https://rseng.github.io/software/repository/github/vojtech-sidorin/quickclump", "api_url": "https://rseng.github.io/software/api/repos/github/vojtech-sidorin/quickclump"}, {"uid": "github/DrexelLenser/Lenser", "html_url": "https://rseng.github.io/software/repository/github/DrexelLenser/Lenser", "api_url": "https://rseng.github.io/software/api/repos/github/DrexelLenser/Lenser"}, {"uid": "github/tum-esm/pyra", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/pyra", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/pyra"}, {"uid": "github/tum-esm/ivy", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/ivy", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/ivy"}, {"uid": "github/sbraden/circle-craters", "html_url": "https://rseng.github.io/software/repository/github/sbraden/circle-craters", "api_url": "https://rseng.github.io/software/api/repos/github/sbraden/circle-craters"}, {"uid": "github/zonca/dst", "html_url": "https://rseng.github.io/software/repository/github/zonca/dst", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/dst"}, {"uid": "github/zonca/python-qucs", "html_url": "https://rseng.github.io/software/repository/github/zonca/python-qucs", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/python-qucs"}, {"uid": "github/jeffdaily/parasail-python", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail-python", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail-python"}, {"uid": "github/jeffdaily/parasail", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail"}, {"uid": "github/temuller/hostphot", "html_url": "https://rseng.github.io/software/repository/github/temuller/hostphot", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/hostphot"}, {"uid": "github/temuller/piscola", "html_url": "https://rseng.github.io/software/repository/github/temuller/piscola", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/piscola"}, {"uid": "github/MASILab/pyPheWAS", "html_url": "https://rseng.github.io/software/repository/github/MASILab/pyPheWAS", "api_url": "https://rseng.github.io/software/api/repos/github/MASILab/pyPheWAS"}, {"uid": "github/ChemaPalencia/M_SMiLe", "html_url": "https://rseng.github.io/software/repository/github/ChemaPalencia/M_SMiLe", "api_url": "https://rseng.github.io/software/api/repos/github/ChemaPalencia/M_SMiLe"}, {"uid": "github/smirik/resonances", "html_url": "https://rseng.github.io/software/repository/github/smirik/resonances", "api_url": "https://rseng.github.io/software/api/repos/github/smirik/resonances"}, {"uid": "github/nombac/optab", "html_url": "https://rseng.github.io/software/repository/github/nombac/optab", "api_url": "https://rseng.github.io/software/api/repos/github/nombac/optab"}, {"uid": "github/putonti/virmine", "html_url": "https://rseng.github.io/software/repository/github/putonti/virmine", "api_url": "https://rseng.github.io/software/api/repos/github/putonti/virmine"}, {"uid": "github/JuliaOcean/AIBECS.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/AIBECS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/AIBECS.jl"}, {"uid": "github/JuliaOcean/PlanktonIndividuals.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/PlanktonIndividuals.jl"}, {"uid": "github/zkdtc/MLC_ELGs", "html_url": "https://rseng.github.io/software/repository/github/zkdtc/MLC_ELGs", "api_url": "https://rseng.github.io/software/api/repos/github/zkdtc/MLC_ELGs"}, {"uid": "github/samwaseda/mamonca", "html_url": "https://rseng.github.io/software/repository/github/samwaseda/mamonca", "api_url": "https://rseng.github.io/software/api/repos/github/samwaseda/mamonca"}, {"uid": "github/snystrom/memes", "html_url": "https://rseng.github.io/software/repository/github/snystrom/memes", "api_url": "https://rseng.github.io/software/api/repos/github/snystrom/memes"}, {"uid": "github/JSB-UCLA/scPNMF", "html_url": "https://rseng.github.io/software/repository/github/JSB-UCLA/scPNMF", "api_url": "https://rseng.github.io/software/api/repos/github/JSB-UCLA/scPNMF"}, {"uid": "github/moustakas/iSEDfit", "html_url": "https://rseng.github.io/software/repository/github/moustakas/iSEDfit", "api_url": "https://rseng.github.io/software/api/repos/github/moustakas/iSEDfit"}, {"uid": "github/adammoss/supernovae", "html_url": "https://rseng.github.io/software/repository/github/adammoss/supernovae", "api_url": "https://rseng.github.io/software/api/repos/github/adammoss/supernovae"}, {"uid": "github/isglobal-brge/dsExposome", "html_url": "https://rseng.github.io/software/repository/github/isglobal-brge/dsExposome", "api_url": "https://rseng.github.io/software/api/repos/github/isglobal-brge/dsExposome"}, {"uid": "github/scrook/neuroml-db", "html_url": "https://rseng.github.io/software/repository/github/scrook/neuroml-db", "api_url": "https://rseng.github.io/software/api/repos/github/scrook/neuroml-db"}, {"uid": "github/dmentipl/plonk", "html_url": "https://rseng.github.io/software/repository/github/dmentipl/plonk", "api_url": "https://rseng.github.io/software/api/repos/github/dmentipl/plonk"}, {"uid": "github/zhang-zhixiang/spectool", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/spectool", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/spectool"}, {"uid": "github/zhang-zhixiang/stellarSpecModel", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/stellarSpecModel", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/stellarSpecModel"}, {"uid": "github/emhuff/Balrog", "html_url": "https://rseng.github.io/software/repository/github/emhuff/Balrog", "api_url": "https://rseng.github.io/software/api/repos/github/emhuff/Balrog"}, {"uid": "github/johnh2o2/cuvarbase", "html_url": "https://rseng.github.io/software/repository/github/johnh2o2/cuvarbase", "api_url": "https://rseng.github.io/software/api/repos/github/johnh2o2/cuvarbase"}, {"uid": "github/prolfqua/prolfquapp", "html_url": "https://rseng.github.io/software/repository/github/prolfqua/prolfquapp", "api_url": "https://rseng.github.io/software/api/repos/github/prolfqua/prolfquapp"}, {"uid": "github/pontoppi/radlite", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/radlite", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/radlite"}, {"uid": "github/pontoppi/ctool", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/ctool", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/ctool"}, {"uid": "github/tolkit/telomeric-identifier", "html_url": "https://rseng.github.io/software/repository/github/tolkit/telomeric-identifier", "api_url": "https://rseng.github.io/software/api/repos/github/tolkit/telomeric-identifier"}, {"uid": "github/pyxnat/pyxnat", "html_url": "https://rseng.github.io/software/repository/github/pyxnat/pyxnat", "api_url": "https://rseng.github.io/software/api/repos/github/pyxnat/pyxnat"}, {"uid": "github/SpyDust/SpyDust", "html_url": "https://rseng.github.io/software/repository/github/SpyDust/SpyDust", "api_url": "https://rseng.github.io/software/api/repos/github/SpyDust/SpyDust"}, {"uid": "github/JuliaGeometry/DelaunayTriangulation.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeometry/DelaunayTriangulation.jl"}, {"uid": "github/Dfam-consortium/RepeatModeler", "html_url": "https://rseng.github.io/software/repository/github/Dfam-consortium/RepeatModeler", "api_url": "https://rseng.github.io/software/api/repos/github/Dfam-consortium/RepeatModeler"}, {"uid": "github/dvallesp/vortex", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex"}, {"uid": "github/dvallesp/asohf", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/asohf", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/asohf"}, {"uid": "github/dvallesp/vortex-p", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex-p", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex-p"}, {"uid": "github/nexml/nexml.java", "html_url": "https://rseng.github.io/software/repository/github/nexml/nexml.java", "api_url": "https://rseng.github.io/software/api/repos/github/nexml/nexml.java"}, {"uid": "github/fwhigh/stellar-locus-regression", "html_url": "https://rseng.github.io/software/repository/github/fwhigh/stellar-locus-regression", "api_url": "https://rseng.github.io/software/api/repos/github/fwhigh/stellar-locus-regression"}, {"uid": "github/vishwas1984/LaplaceInterpolation.jl", "html_url": "https://rseng.github.io/software/repository/github/vishwas1984/LaplaceInterpolation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vishwas1984/LaplaceInterpolation.jl"}, {"uid": "github/intake/intake", "html_url": "https://rseng.github.io/software/repository/github/intake/intake", "api_url": "https://rseng.github.io/software/api/repos/github/intake/intake"}, {"uid": "github/simonbesnard1/gedidb", "html_url": "https://rseng.github.io/software/repository/github/simonbesnard1/gedidb", "api_url": "https://rseng.github.io/software/api/repos/github/simonbesnard1/gedidb"}, {"uid": "github/girder/viime", "html_url": "https://rseng.github.io/software/repository/github/girder/viime", "api_url": "https://rseng.github.io/software/api/repos/github/girder/viime"}, {"uid": "github/galactic-ai/haloflow", "html_url": "https://rseng.github.io/software/repository/github/galactic-ai/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/galactic-ai/haloflow"}, {"uid": "github/SysBioUAB/hpi_predictor", "html_url": "https://rseng.github.io/software/repository/github/SysBioUAB/hpi_predictor", "api_url": "https://rseng.github.io/software/api/repos/github/SysBioUAB/hpi_predictor"}, {"uid": "github/james-trayford/strauss", "html_url": "https://rseng.github.io/software/repository/github/james-trayford/strauss", "api_url": "https://rseng.github.io/software/api/repos/github/james-trayford/strauss"}, {"uid": "github/HUPO-PSI/mzspeclib-py", "html_url": "https://rseng.github.io/software/repository/github/HUPO-PSI/mzspeclib-py", "api_url": "https://rseng.github.io/software/api/repos/github/HUPO-PSI/mzspeclib-py"}, {"uid": "github/leonardlab/COMET", "html_url": "https://rseng.github.io/software/repository/github/leonardlab/COMET", "api_url": "https://rseng.github.io/software/api/repos/github/leonardlab/COMET"}, {"uid": "github/kieranatkins/silique-detector", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/silique-detector", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/silique-detector"}, {"uid": "github/kieranatkins/gimp-image-annotator", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/gimp-image-annotator", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/gimp-image-annotator"}, {"uid": "github/cwieder/py-ssPA", "html_url": "https://rseng.github.io/software/repository/github/cwieder/py-ssPA", "api_url": "https://rseng.github.io/software/api/repos/github/cwieder/py-ssPA"}, {"uid": "github/mbonav/Exo_DMC", "html_url": "https://rseng.github.io/software/repository/github/mbonav/Exo_DMC", "api_url": "https://rseng.github.io/software/api/repos/github/mbonav/Exo_DMC"}, {"uid": "github/tensorly/viz", "html_url": "https://rseng.github.io/software/repository/github/tensorly/viz", "api_url": "https://rseng.github.io/software/api/repos/github/tensorly/viz"}, {"uid": "github/yrkhalil/SPIBACK", "html_url": "https://rseng.github.io/software/repository/github/yrkhalil/SPIBACK", "api_url": "https://rseng.github.io/software/api/repos/github/yrkhalil/SPIBACK"}, {"uid": "github/LiuJJ0327/CCPE", "html_url": "https://rseng.github.io/software/repository/github/LiuJJ0327/CCPE", "api_url": "https://rseng.github.io/software/api/repos/github/LiuJJ0327/CCPE"}, {"uid": "github/gnudatalanguage/gdl", "html_url": "https://rseng.github.io/software/repository/github/gnudatalanguage/gdl", "api_url": "https://rseng.github.io/software/api/repos/github/gnudatalanguage/gdl"}, {"uid": "github/secimTools/SECIMTools", "html_url": "https://rseng.github.io/software/repository/github/secimTools/SECIMTools", "api_url": "https://rseng.github.io/software/api/repos/github/secimTools/SECIMTools"}, {"uid": "github/biaslab/RxInfer.jl", "html_url": "https://rseng.github.io/software/repository/github/biaslab/RxInfer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/biaslab/RxInfer.jl"}, {"uid": "github/containers/podman", "html_url": "https://rseng.github.io/software/repository/github/containers/podman", "api_url": "https://rseng.github.io/software/api/repos/github/containers/podman"}, {"uid": "github/theosanderson/chronumental", "html_url": "https://rseng.github.io/software/repository/github/theosanderson/chronumental", "api_url": "https://rseng.github.io/software/api/repos/github/theosanderson/chronumental"}, {"uid": "github/mchalela/GriSPy", "html_url": "https://rseng.github.io/software/repository/github/mchalela/GriSPy", "api_url": "https://rseng.github.io/software/api/repos/github/mchalela/GriSPy"}, {"uid": "github/hover2pi/SEDkit", "html_url": "https://rseng.github.io/software/repository/github/hover2pi/SEDkit", "api_url": "https://rseng.github.io/software/api/repos/github/hover2pi/SEDkit"}, {"uid": "github/kno10/python-kmedoids", "html_url": "https://rseng.github.io/software/repository/github/kno10/python-kmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/kno10/python-kmedoids"}, {"uid": "github/abacusorg/zeldovich-PLT", "html_url": "https://rseng.github.io/software/repository/github/abacusorg/zeldovich-PLT", "api_url": "https://rseng.github.io/software/api/repos/github/abacusorg/zeldovich-PLT"}, {"uid": "github/mirnylab/pairtools", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/pairtools"}, {"uid": "github/mirnylab/cooler", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/cooler", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/cooler"}, {"uid": "github/tariqdaouda/CAMAP", "html_url": "https://rseng.github.io/software/repository/github/tariqdaouda/CAMAP", "api_url": "https://rseng.github.io/software/api/repos/github/tariqdaouda/CAMAP"}, {"uid": "github/psheehan/pdspy", "html_url": "https://rseng.github.io/software/repository/github/psheehan/pdspy", "api_url": "https://rseng.github.io/software/api/repos/github/psheehan/pdspy"}, {"uid": "github/nadvornikjiri/HiSS-Cube", "html_url": "https://rseng.github.io/software/repository/github/nadvornikjiri/HiSS-Cube", "api_url": "https://rseng.github.io/software/api/repos/github/nadvornikjiri/HiSS-Cube"}, {"uid": "github/fgerick/Limace.jl", "html_url": "https://rseng.github.io/software/repository/github/fgerick/Limace.jl", "api_url": "https://rseng.github.io/software/api/repos/github/fgerick/Limace.jl"}, {"uid": "github/PFPE/shipgrav", "html_url": "https://rseng.github.io/software/repository/github/PFPE/shipgrav", "api_url": "https://rseng.github.io/software/api/repos/github/PFPE/shipgrav"}, {"uid": "github/easybuilders/easybuild", "html_url": "https://rseng.github.io/software/repository/github/easybuilders/easybuild", "api_url": "https://rseng.github.io/software/api/repos/github/easybuilders/easybuild"}, {"uid": "github/UCL/rmcmc", "html_url": "https://rseng.github.io/software/repository/github/UCL/rmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/UCL/rmcmc"}, {"uid": "github/rasg-affiliates/healvis", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/healvis", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/healvis"}, {"uid": "github/rasg-affiliates/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/21cmSense"}, {"uid": "github/Markusjsommer/BalrogCPP", "html_url": "https://rseng.github.io/software/repository/github/Markusjsommer/BalrogCPP", "api_url": "https://rseng.github.io/software/api/repos/github/Markusjsommer/BalrogCPP"}, {"uid": "github/ictr/covid19-outbreak-simulator", "html_url": "https://rseng.github.io/software/repository/github/ictr/covid19-outbreak-simulator", "api_url": "https://rseng.github.io/software/api/repos/github/ictr/covid19-outbreak-simulator"}, {"uid": "github/mecobpsu/bacseq", "html_url": "https://rseng.github.io/software/repository/github/mecobpsu/bacseq", "api_url": "https://rseng.github.io/software/api/repos/github/mecobpsu/bacseq"}, {"uid": "github/cdominik/optool", "html_url": "https://rseng.github.io/software/repository/github/cdominik/optool", "api_url": "https://rseng.github.io/software/api/repos/github/cdominik/optool"}, {"uid": "github/sheryl-ai/MetaPred", "html_url": "https://rseng.github.io/software/repository/github/sheryl-ai/MetaPred", "api_url": "https://rseng.github.io/software/api/repos/github/sheryl-ai/MetaPred"}, {"uid": "github/hanyue36/nanoplexer", "html_url": "https://rseng.github.io/software/repository/github/hanyue36/nanoplexer", "api_url": "https://rseng.github.io/software/api/repos/github/hanyue36/nanoplexer"}, {"uid": "github/christiangil/StellarSpectraObservationFitting.jl", "html_url": "https://rseng.github.io/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/christiangil/StellarSpectraObservationFitting.jl"}, {"uid": "github/berenslab/fundus_image_toolbox", "html_url": "https://rseng.github.io/software/repository/github/berenslab/fundus_image_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/fundus_image_toolbox"}, {"uid": "github/berenslab/MorphoPy", "html_url": "https://rseng.github.io/software/repository/github/berenslab/MorphoPy", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/MorphoPy"}, {"uid": "github/lnasellentin/DALI", "html_url": "https://rseng.github.io/software/repository/github/lnasellentin/DALI", "api_url": "https://rseng.github.io/software/api/repos/github/lnasellentin/DALI"}, {"uid": "github/walaj/svaba", "html_url": "https://rseng.github.io/software/repository/github/walaj/svaba", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/svaba"}, {"uid": "github/walaj/SeqLib", "html_url": "https://rseng.github.io/software/repository/github/walaj/SeqLib", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/SeqLib"}, {"uid": "github/GabrielaCR/AGNfitter", "html_url": "https://rseng.github.io/software/repository/github/GabrielaCR/AGNfitter", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielaCR/AGNfitter"}, {"uid": "github/tidyverse/ggplot2", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/ggplot2", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/ggplot2"}, {"uid": "github/tidyverse/glue", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/glue", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/glue"}, {"uid": "github/gianthk/ciclope", "html_url": "https://rseng.github.io/software/repository/github/gianthk/ciclope", "api_url": "https://rseng.github.io/software/api/repos/github/gianthk/ciclope"}, {"uid": "github/esheldon/ngmix", "html_url": "https://rseng.github.io/software/repository/github/esheldon/ngmix", "api_url": "https://rseng.github.io/software/api/repos/github/esheldon/ngmix"}, {"uid": "github/aibhleog/baryon-sweep", "html_url": "https://rseng.github.io/software/repository/github/aibhleog/baryon-sweep", "api_url": "https://rseng.github.io/software/api/repos/github/aibhleog/baryon-sweep"}, {"uid": "github/python-streamz/streamz", "html_url": "https://rseng.github.io/software/repository/github/python-streamz/streamz", "api_url": "https://rseng.github.io/software/api/repos/github/python-streamz/streamz"}, {"uid": "github/widdowquinn/pyani", "html_url": "https://rseng.github.io/software/repository/github/widdowquinn/pyani", "api_url": "https://rseng.github.io/software/api/repos/github/widdowquinn/pyani"}, {"uid": "github/Pometry/Raphtory", "html_url": "https://rseng.github.io/software/repository/github/Pometry/Raphtory", "api_url": "https://rseng.github.io/software/api/repos/github/Pometry/Raphtory"}, {"uid": "github/caimeng2/seesus", "html_url": "https://rseng.github.io/software/repository/github/caimeng2/seesus", "api_url": "https://rseng.github.io/software/api/repos/github/caimeng2/seesus"}, {"uid": "github/ndrakos/ICICLE", "html_url": "https://rseng.github.io/software/repository/github/ndrakos/ICICLE", "api_url": "https://rseng.github.io/software/api/repos/github/ndrakos/ICICLE"}, {"uid": "github/etal/cnvkit", "html_url": "https://rseng.github.io/software/repository/github/etal/cnvkit", "api_url": "https://rseng.github.io/software/api/repos/github/etal/cnvkit"}, {"uid": "github/Yash-10/beta-sgp", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/beta-sgp", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/beta-sgp"}, {"uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection"}, {"uid": "github/CIBERER/nf-CBRA-snvs", "html_url": "https://rseng.github.io/software/repository/github/CIBERER/nf-CBRA-snvs", "api_url": "https://rseng.github.io/software/api/repos/github/CIBERER/nf-CBRA-snvs"}, {"uid": "github/HKU-BAL/Clair3", "html_url": "https://rseng.github.io/software/repository/github/HKU-BAL/Clair3", "api_url": "https://rseng.github.io/software/api/repos/github/HKU-BAL/Clair3"}, {"uid": "github/robynlm/ebweyl", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ebweyl", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ebweyl"}, {"uid": "github/robynlm/sphereint", "html_url": "https://rseng.github.io/software/repository/github/robynlm/sphereint", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/sphereint"}, {"uid": "github/robynlm/ICPertFLRW", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ICPertFLRW", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ICPertFLRW"}, {"uid": "github/facom/tidev", "html_url": "https://rseng.github.io/software/repository/github/facom/tidev", "api_url": "https://rseng.github.io/software/api/repos/github/facom/tidev"}, {"uid": "github/facom/BHMcalc", "html_url": "https://rseng.github.io/software/repository/github/facom/BHMcalc", "api_url": "https://rseng.github.io/software/api/repos/github/facom/BHMcalc"}, {"uid": "github/facom/exorings", "html_url": "https://rseng.github.io/software/repository/github/facom/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/facom/exorings"}, {"uid": "github/ngbusca/QuasarNET", "html_url": "https://rseng.github.io/software/repository/github/ngbusca/QuasarNET", "api_url": "https://rseng.github.io/software/api/repos/github/ngbusca/QuasarNET"}, {"uid": "github/jonas/tig", "html_url": "https://rseng.github.io/software/repository/github/jonas/tig", "api_url": "https://rseng.github.io/software/api/repos/github/jonas/tig"}, {"uid": "github/tcherninceline/PPInteractions", "html_url": "https://rseng.github.io/software/repository/github/tcherninceline/PPInteractions", "api_url": "https://rseng.github.io/software/api/repos/github/tcherninceline/PPInteractions"}, {"uid": "github/xmuyulab/DreamDIA-XMBD", "html_url": "https://rseng.github.io/software/repository/github/xmuyulab/DreamDIA-XMBD", "api_url": "https://rseng.github.io/software/api/repos/github/xmuyulab/DreamDIA-XMBD"}, {"uid": "github/klb2/qmkpy", "html_url": "https://rseng.github.io/software/repository/github/klb2/qmkpy", "api_url": "https://rseng.github.io/software/api/repos/github/klb2/qmkpy"}, {"uid": "github/mjrfringes/haystacks", "html_url": "https://rseng.github.io/software/repository/github/mjrfringes/haystacks", "api_url": "https://rseng.github.io/software/api/repos/github/mjrfringes/haystacks"}, {"uid": "github/mifumagalli/cluster-cloc", "html_url": "https://rseng.github.io/software/repository/github/mifumagalli/cluster-cloc", "api_url": "https://rseng.github.io/software/api/repos/github/mifumagalli/cluster-cloc"}, {"uid": "github/fermisurfaces/IFermi", "html_url": "https://rseng.github.io/software/repository/github/fermisurfaces/IFermi", "api_url": "https://rseng.github.io/software/api/repos/github/fermisurfaces/IFermi"}, {"uid": "github/wchenastro/Mosaic", "html_url": "https://rseng.github.io/software/repository/github/wchenastro/Mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/wchenastro/Mosaic"}, {"uid": "github/felixbosco/KeplerFit", "html_url": "https://rseng.github.io/software/repository/github/felixbosco/KeplerFit", "api_url": "https://rseng.github.io/software/api/repos/github/felixbosco/KeplerFit"}, {"uid": "github/nhejazi/haldensify", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/haldensify", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/haldensify"}, {"uid": "github/nhejazi/medoutcon", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/medoutcon", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/medoutcon"}, {"uid": "github/nhejazi/txshift", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/txshift", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/txshift"}, {"uid": "github/anmolter/XLUR", "html_url": "https://rseng.github.io/software/repository/github/anmolter/XLUR", "api_url": "https://rseng.github.io/software/api/repos/github/anmolter/XLUR"}, {"uid": "github/UU-ER/AdOpT-NET0", "html_url": "https://rseng.github.io/software/repository/github/UU-ER/AdOpT-NET0", "api_url": "https://rseng.github.io/software/api/repos/github/UU-ER/AdOpT-NET0"}, {"uid": "github/andresGranadosC/GalRotpy", "html_url": "https://rseng.github.io/software/repository/github/andresGranadosC/GalRotpy", "api_url": "https://rseng.github.io/software/api/repos/github/andresGranadosC/GalRotpy"}, {"uid": "github/damocles-code/damocles", "html_url": "https://rseng.github.io/software/repository/github/damocles-code/damocles", "api_url": "https://rseng.github.io/software/api/repos/github/damocles-code/damocles"}, {"uid": "github/python-hydro/pyro2", "html_url": "https://rseng.github.io/software/repository/github/python-hydro/pyro2", "api_url": "https://rseng.github.io/software/api/repos/github/python-hydro/pyro2"}, {"uid": "github/EhsanGharibNezhad/TelescopeML", "html_url": "https://rseng.github.io/software/repository/github/EhsanGharibNezhad/TelescopeML", "api_url": "https://rseng.github.io/software/api/repos/github/EhsanGharibNezhad/TelescopeML"}, {"uid": "github/Simthembile/cosmo-pipeline", "html_url": "https://rseng.github.io/software/repository/github/Simthembile/cosmo-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/Simthembile/cosmo-pipeline"}, {"uid": "github/helonghuangastro/exolyn", "html_url": "https://rseng.github.io/software/repository/github/helonghuangastro/exolyn", "api_url": "https://rseng.github.io/software/api/repos/github/helonghuangastro/exolyn"}, {"uid": "github/julia-wrobel/registr", "html_url": "https://rseng.github.io/software/repository/github/julia-wrobel/registr", "api_url": "https://rseng.github.io/software/api/repos/github/julia-wrobel/registr"}, {"uid": "github/tomasplsek/CADET", "html_url": "https://rseng.github.io/software/repository/github/tomasplsek/CADET", "api_url": "https://rseng.github.io/software/api/repos/github/tomasplsek/CADET"}, {"uid": "github/MannLabs/alphapept", "html_url": "https://rseng.github.io/software/repository/github/MannLabs/alphapept", "api_url": "https://rseng.github.io/software/api/repos/github/MannLabs/alphapept"}, {"uid": "github/MikeHeiber/Excimontec", "html_url": "https://rseng.github.io/software/repository/github/MikeHeiber/Excimontec", "api_url": "https://rseng.github.io/software/api/repos/github/MikeHeiber/Excimontec"}, {"uid": "github/CDCgov/BART-Survival", "html_url": "https://rseng.github.io/software/repository/github/CDCgov/BART-Survival", "api_url": "https://rseng.github.io/software/api/repos/github/CDCgov/BART-Survival"}, {"uid": "github/google/caliban", "html_url": "https://rseng.github.io/software/repository/github/google/caliban", "api_url": "https://rseng.github.io/software/api/repos/github/google/caliban"}, {"uid": "github/google/jax", "html_url": "https://rseng.github.io/software/repository/github/google/jax", "api_url": "https://rseng.github.io/software/api/repos/github/google/jax"}, {"uid": "github/google/best", "html_url": "https://rseng.github.io/software/repository/github/google/best", "api_url": "https://rseng.github.io/software/api/repos/github/google/best"}, {"uid": "github/google/flax", "html_url": "https://rseng.github.io/software/repository/github/google/flax", "api_url": "https://rseng.github.io/software/api/repos/github/google/flax"}, {"uid": "github/Vini2/GraphBin", "html_url": "https://rseng.github.io/software/repository/github/Vini2/GraphBin", "api_url": "https://rseng.github.io/software/api/repos/github/Vini2/GraphBin"}, {"uid": "github/buschlab/fhirspark", "html_url": "https://rseng.github.io/software/repository/github/buschlab/fhirspark", "api_url": "https://rseng.github.io/software/api/repos/github/buschlab/fhirspark"}, {"uid": "github/liushang17/AEnet", "html_url": "https://rseng.github.io/software/repository/github/liushang17/AEnet", "api_url": "https://rseng.github.io/software/api/repos/github/liushang17/AEnet"}, {"uid": "github/pmaxted/pycheops", "html_url": "https://rseng.github.io/software/repository/github/pmaxted/pycheops", "api_url": "https://rseng.github.io/software/api/repos/github/pmaxted/pycheops"}, {"uid": "github/pymatting/pymatting", "html_url": "https://rseng.github.io/software/repository/github/pymatting/pymatting", "api_url": "https://rseng.github.io/software/api/repos/github/pymatting/pymatting"}, {"uid": "github/NRDD-constraints/NRDD", "html_url": "https://rseng.github.io/software/repository/github/NRDD-constraints/NRDD", "api_url": "https://rseng.github.io/software/api/repos/github/NRDD-constraints/NRDD"}, {"uid": "github/justincfeng/PoMiN", "html_url": "https://rseng.github.io/software/repository/github/justincfeng/PoMiN", "api_url": "https://rseng.github.io/software/api/repos/github/justincfeng/PoMiN"}, {"uid": "github/varlociraptor/varlociraptorhub.io", "html_url": "https://rseng.github.io/software/repository/github/varlociraptor/varlociraptorhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/varlociraptor/varlociraptorhub.io"}, {"uid": "github/metawards/MetaWards", "html_url": "https://rseng.github.io/software/repository/github/metawards/MetaWards", "api_url": "https://rseng.github.io/software/api/repos/github/metawards/MetaWards"}, {"uid": "github/cire-thk/BifacialSimu", "html_url": "https://rseng.github.io/software/repository/github/cire-thk/BifacialSimu", "api_url": "https://rseng.github.io/software/api/repos/github/cire-thk/BifacialSimu"}, {"uid": "github/RuiningZHAO/wcpy", "html_url": "https://rseng.github.io/software/repository/github/RuiningZHAO/wcpy", "api_url": "https://rseng.github.io/software/api/repos/github/RuiningZHAO/wcpy"}, {"uid": "github/pratheesh3780/grapesAgri1", "html_url": "https://rseng.github.io/software/repository/github/pratheesh3780/grapesAgri1", "api_url": "https://rseng.github.io/software/api/repos/github/pratheesh3780/grapesAgri1"}, {"uid": "github/aarondotter/iso", "html_url": "https://rseng.github.io/software/repository/github/aarondotter/iso", "api_url": "https://rseng.github.io/software/api/repos/github/aarondotter/iso"}, {"uid": "github/CosmoStatGW/DarkSirensStat", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/DarkSirensStat", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/DarkSirensStat"}, {"uid": "github/CosmoStatGW/gwfast", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/gwfast", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/gwfast"}, {"uid": "github/CosmoStatGW/MGCosmoPop", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/MGCosmoPop", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/MGCosmoPop"}, {"uid": "github/CosmoStatGW/WF4Py", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/WF4Py", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/WF4Py"}, {"uid": "github/Guo-Jian-Wang/colfi", "html_url": "https://rseng.github.io/software/repository/github/Guo-Jian-Wang/colfi", "api_url": "https://rseng.github.io/software/api/repos/github/Guo-Jian-Wang/colfi"}, {"uid": "github/isovic/graphmap", "html_url": "https://rseng.github.io/software/repository/github/isovic/graphmap", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/graphmap"}, {"uid": "github/isovic/racon", "html_url": "https://rseng.github.io/software/repository/github/isovic/racon", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/racon"}, {"uid": "github/flyaflya/causact", "html_url": "https://rseng.github.io/software/repository/github/flyaflya/causact", "api_url": "https://rseng.github.io/software/api/repos/github/flyaflya/causact"}, {"uid": "github/bolverk/huji-rich", "html_url": "https://rseng.github.io/software/repository/github/bolverk/huji-rich", "api_url": "https://rseng.github.io/software/api/repos/github/bolverk/huji-rich"}, {"uid": "github/ianfhunter/GNOLL", "html_url": "https://rseng.github.io/software/repository/github/ianfhunter/GNOLL", "api_url": "https://rseng.github.io/software/api/repos/github/ianfhunter/GNOLL"}, {"uid": "github/skovaka/UNCALLED", "html_url": "https://rseng.github.io/software/repository/github/skovaka/UNCALLED", "api_url": "https://rseng.github.io/software/api/repos/github/skovaka/UNCALLED"}, {"uid": "github/subhk/BiGSTARS.jl", "html_url": "https://rseng.github.io/software/repository/github/subhk/BiGSTARS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/subhk/BiGSTARS.jl"}, {"uid": "github/pyro-ppl/pyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/pyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/pyro"}, {"uid": "github/pyro-ppl/numpyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/numpyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/numpyro"}, {"uid": "github/OxES/k2sc", "html_url": "https://rseng.github.io/software/repository/github/OxES/k2sc", "api_url": "https://rseng.github.io/software/api/repos/github/OxES/k2sc"}, {"uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", "html_url": "https://rseng.github.io/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", "api_url": "https://rseng.github.io/software/api/repos/github/Julian-Sommer/chen-dai-2025-lightcurve-model"}, {"uid": "github/bionlplab/GlaucomaNet", "html_url": "https://rseng.github.io/software/repository/github/bionlplab/GlaucomaNet", "api_url": "https://rseng.github.io/software/api/repos/github/bionlplab/GlaucomaNet"}, {"uid": "github/DrSoulain/PREVIS", "html_url": "https://rseng.github.io/software/repository/github/DrSoulain/PREVIS", "api_url": "https://rseng.github.io/software/api/repos/github/DrSoulain/PREVIS"}, {"uid": "github/tne-lab/py-behav-box-v2", "html_url": "https://rseng.github.io/software/repository/github/tne-lab/py-behav-box-v2", "api_url": "https://rseng.github.io/software/api/repos/github/tne-lab/py-behav-box-v2"}, {"uid": "github/khowe/quick", "html_url": "https://rseng.github.io/software/repository/github/khowe/quick", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quick"}, {"uid": "github/khowe/quicktree", "html_url": "https://rseng.github.io/software/repository/github/khowe/quicktree", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quicktree"}, {"uid": "github/SteveMacenski/slam_toolbox", "html_url": "https://rseng.github.io/software/repository/github/SteveMacenski/slam_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/SteveMacenski/slam_toolbox"}, {"uid": "github/ScionResearch/genomesizeR", "html_url": "https://rseng.github.io/software/repository/github/ScionResearch/genomesizeR", "api_url": "https://rseng.github.io/software/api/repos/github/ScionResearch/genomesizeR"}, {"uid": "github/AndreNicolasChene/DRAGRACES", "html_url": "https://rseng.github.io/software/repository/github/AndreNicolasChene/DRAGRACES", "api_url": "https://rseng.github.io/software/api/repos/github/AndreNicolasChene/DRAGRACES"}, {"uid": "github/robertwissing/EOS", "html_url": "https://rseng.github.io/software/repository/github/robertwissing/EOS", "api_url": "https://rseng.github.io/software/api/repos/github/robertwissing/EOS"}, {"uid": "github/yatiml/yatiml", "html_url": "https://rseng.github.io/software/repository/github/yatiml/yatiml", "api_url": "https://rseng.github.io/software/api/repos/github/yatiml/yatiml"}, {"uid": "github/mathworks/Simscape-Medical-Ventilator", "html_url": "https://rseng.github.io/software/repository/github/mathworks/Simscape-Medical-Ventilator", "api_url": "https://rseng.github.io/software/api/repos/github/mathworks/Simscape-Medical-Ventilator"}, {"uid": "github/vimc/vaultr", "html_url": "https://rseng.github.io/software/repository/github/vimc/vaultr", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/vaultr"}, {"uid": "github/vimc/dettl", "html_url": "https://rseng.github.io/software/repository/github/vimc/dettl", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/dettl"}, {"uid": "github/vimc/orderly", "html_url": "https://rseng.github.io/software/repository/github/vimc/orderly", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/orderly"}, {"uid": "github/AlexanderLabWHOI/EUKulele", "html_url": "https://rseng.github.io/software/repository/github/AlexanderLabWHOI/EUKulele", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderLabWHOI/EUKulele"}, {"uid": "github/CoastEgo/microlux", "html_url": "https://rseng.github.io/software/repository/github/CoastEgo/microlux", "api_url": "https://rseng.github.io/software/api/repos/github/CoastEgo/microlux"}, {"uid": "github/nekStab/LightKrylov", "html_url": "https://rseng.github.io/software/repository/github/nekStab/LightKrylov", "api_url": "https://rseng.github.io/software/api/repos/github/nekStab/LightKrylov"}, {"uid": "github/wouterpeere/GHEtool", "html_url": "https://rseng.github.io/software/repository/github/wouterpeere/GHEtool", "api_url": "https://rseng.github.io/software/api/repos/github/wouterpeere/GHEtool"}, {"uid": "github/rajeshrinet/pystokes", "html_url": "https://rseng.github.io/software/repository/github/rajeshrinet/pystokes", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshrinet/pystokes"}, {"uid": "github/erikhom/aida", "html_url": "https://rseng.github.io/software/repository/github/erikhom/aida", "api_url": "https://rseng.github.io/software/api/repos/github/erikhom/aida"}, {"uid": "github/thorstone25/qups", "html_url": "https://rseng.github.io/software/repository/github/thorstone25/qups", "api_url": "https://rseng.github.io/software/api/repos/github/thorstone25/qups"}, {"uid": "github/byuflowlab/GXBeam.jl", "html_url": "https://rseng.github.io/software/repository/github/byuflowlab/GXBeam.jl", "api_url": "https://rseng.github.io/software/api/repos/github/byuflowlab/GXBeam.jl"}, {"uid": "github/FluidityProject/fluidity", "html_url": "https://rseng.github.io/software/repository/github/FluidityProject/fluidity", "api_url": "https://rseng.github.io/software/api/repos/github/FluidityProject/fluidity"}, {"uid": "github/garrelt/C2-Ray3Dm1D_Helium", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray3Dm1D_Helium"}, {"uid": "github/garrelt/C2-Ray1D", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray1D", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray1D"}, {"uid": "github/FrederickHuangLin/ANCOMBC", "html_url": "https://rseng.github.io/software/repository/github/FrederickHuangLin/ANCOMBC", "api_url": "https://rseng.github.io/software/api/repos/github/FrederickHuangLin/ANCOMBC"}, {"uid": "github/brocklab/pycashier", "html_url": "https://rseng.github.io/software/repository/github/brocklab/pycashier", "api_url": "https://rseng.github.io/software/api/repos/github/brocklab/pycashier"}, {"uid": "github/rhernandvel/ViromeXplore", "html_url": "https://rseng.github.io/software/repository/github/rhernandvel/ViromeXplore", "api_url": "https://rseng.github.io/software/api/repos/github/rhernandvel/ViromeXplore"}, {"uid": "github/vsbuffalo/scythe", "html_url": "https://rseng.github.io/software/repository/github/vsbuffalo/scythe", "api_url": "https://rseng.github.io/software/api/repos/github/vsbuffalo/scythe"}, {"uid": "github/perfanalytics/pose2sim", "html_url": "https://rseng.github.io/software/repository/github/perfanalytics/pose2sim", "api_url": "https://rseng.github.io/software/api/repos/github/perfanalytics/pose2sim"}, {"uid": "github/ProfessorBrunner/rc3-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ProfessorBrunner/rc3-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ProfessorBrunner/rc3-pipeline"}, {"uid": "github/carlosandrepaes/GaPP", "html_url": "https://rseng.github.io/software/repository/github/carlosandrepaes/GaPP", "api_url": "https://rseng.github.io/software/api/repos/github/carlosandrepaes/GaPP"}, {"uid": "github/wf4ever/astrotaverna", "html_url": "https://rseng.github.io/software/repository/github/wf4ever/astrotaverna", "api_url": "https://rseng.github.io/software/api/repos/github/wf4ever/astrotaverna"}, {"uid": "github/Pranab-JD/LeXInt", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/LeXInt", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/LeXInt"}, {"uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE"}, {"uid": "github/tamarervin/SolAster", "html_url": "https://rseng.github.io/software/repository/github/tamarervin/SolAster", "api_url": "https://rseng.github.io/software/api/repos/github/tamarervin/SolAster"}, {"uid": "github/kathlandgren/SWAMPE", "html_url": "https://rseng.github.io/software/repository/github/kathlandgren/SWAMPE", "api_url": "https://rseng.github.io/software/api/repos/github/kathlandgren/SWAMPE"}, {"uid": "github/pr2database/pr2-primers", "html_url": "https://rseng.github.io/software/repository/github/pr2database/pr2-primers", "api_url": "https://rseng.github.io/software/api/repos/github/pr2database/pr2-primers"}, {"uid": "github/jvc2688/K2-CPM", "html_url": "https://rseng.github.io/software/repository/github/jvc2688/K2-CPM", "api_url": "https://rseng.github.io/software/api/repos/github/jvc2688/K2-CPM"}, {"uid": "github/vprusso/toqito", "html_url": "https://rseng.github.io/software/repository/github/vprusso/toqito", "api_url": "https://rseng.github.io/software/api/repos/github/vprusso/toqito"}, {"uid": "github/edgardomortiz/Captus", "html_url": "https://rseng.github.io/software/repository/github/edgardomortiz/Captus", "api_url": "https://rseng.github.io/software/api/repos/github/edgardomortiz/Captus"}, {"uid": "github/mongibellili/QuantizedSystemSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/mongibellili/QuantizedSystemSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mongibellili/QuantizedSystemSolver.jl"}, {"uid": "github/FrancesBW/bellamy", "html_url": "https://rseng.github.io/software/repository/github/FrancesBW/bellamy", "api_url": "https://rseng.github.io/software/api/repos/github/FrancesBW/bellamy"}, {"uid": "github/bmorris3/aesop", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/aesop", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/aesop"}, {"uid": "github/bmorris3/fleck", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/fleck", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/fleck"}, {"uid": "github/Bioinformatics-Munich/scas_dashboard", "html_url": "https://rseng.github.io/software/repository/github/Bioinformatics-Munich/scas_dashboard", "api_url": "https://rseng.github.io/software/api/repos/github/Bioinformatics-Munich/scas_dashboard"}, {"uid": "github/MichielCottaar/velbin", "html_url": "https://rseng.github.io/software/repository/github/MichielCottaar/velbin", "api_url": "https://rseng.github.io/software/api/repos/github/MichielCottaar/velbin"}, {"uid": "github/gerthmicha/wolbachia-mlst", "html_url": "https://rseng.github.io/software/repository/github/gerthmicha/wolbachia-mlst", "api_url": "https://rseng.github.io/software/api/repos/github/gerthmicha/wolbachia-mlst"}, {"uid": "github/herjy/SLIT", "html_url": "https://rseng.github.io/software/repository/github/herjy/SLIT", "api_url": "https://rseng.github.io/software/api/repos/github/herjy/SLIT"}, {"uid": "github/mishioo/tesliper", "html_url": "https://rseng.github.io/software/repository/github/mishioo/tesliper", "api_url": "https://rseng.github.io/software/api/repos/github/mishioo/tesliper"}, {"uid": "github/RoelofBerg/limereg", "html_url": "https://rseng.github.io/software/repository/github/RoelofBerg/limereg", "api_url": "https://rseng.github.io/software/api/repos/github/RoelofBerg/limereg"}, {"uid": "github/gabo-di/AquaCrop.jl", "html_url": "https://rseng.github.io/software/repository/github/gabo-di/AquaCrop.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gabo-di/AquaCrop.jl"}, {"uid": "github/EESI/Complet-Plus", "html_url": "https://rseng.github.io/software/repository/github/EESI/Complet-Plus", "api_url": "https://rseng.github.io/software/api/repos/github/EESI/Complet-Plus"}, {"uid": "github/meta-logic/sequoia", "html_url": "https://rseng.github.io/software/repository/github/meta-logic/sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/meta-logic/sequoia"}, {"uid": "github/zhanghe9704/tpsa", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa"}, {"uid": "github/zhanghe9704/tpsa_sym", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa_sym", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa_sym"}, {"uid": "github/sbmlteam/moccasin", "html_url": "https://rseng.github.io/software/repository/github/sbmlteam/moccasin", "api_url": "https://rseng.github.io/software/api/repos/github/sbmlteam/moccasin"}, {"uid": "github/ADThomas-astro/oxaf", "html_url": "https://rseng.github.io/software/repository/github/ADThomas-astro/oxaf", "api_url": "https://rseng.github.io/software/api/repos/github/ADThomas-astro/oxaf"}, {"uid": "github/wiki/Install-macs2", "html_url": "https://rseng.github.io/software/repository/github/wiki/Install-macs2", "api_url": "https://rseng.github.io/software/api/repos/github/wiki/Install-macs2"}, {"uid": "github/lberaldoesilva/naif", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/naif", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/naif"}, {"uid": "github/lberaldoesilva/tropygal", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/tropygal", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/tropygal"}, {"uid": "github/sethspjohnso/satmc", "html_url": "https://rseng.github.io/software/repository/github/sethspjohnso/satmc", "api_url": "https://rseng.github.io/software/api/repos/github/sethspjohnso/satmc"}, {"uid": "github/IBMTRostock/GIFT", "html_url": "https://rseng.github.io/software/repository/github/IBMTRostock/GIFT", "api_url": "https://rseng.github.io/software/api/repos/github/IBMTRostock/GIFT"}, {"uid": "github/Jieyu126/Jitter", "html_url": "https://rseng.github.io/software/repository/github/Jieyu126/Jitter", "api_url": "https://rseng.github.io/software/api/repos/github/Jieyu126/Jitter"}, {"uid": "github/BioinfoUNIBA/REDItools2", "html_url": "https://rseng.github.io/software/repository/github/BioinfoUNIBA/REDItools2", "api_url": "https://rseng.github.io/software/api/repos/github/BioinfoUNIBA/REDItools2"}, {"uid": "github/zd1/telseq", "html_url": "https://rseng.github.io/software/repository/github/zd1/telseq", "api_url": "https://rseng.github.io/software/api/repos/github/zd1/telseq"}, {"uid": "github/CNuge/BOLD-CLI", "html_url": "https://rseng.github.io/software/repository/github/CNuge/BOLD-CLI", "api_url": "https://rseng.github.io/software/api/repos/github/CNuge/BOLD-CLI"}, {"uid": "github/dfm/photodynam", "html_url": "https://rseng.github.io/software/repository/github/dfm/photodynam", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/photodynam"}, {"uid": "github/dfm/ketu", "html_url": "https://rseng.github.io/software/repository/github/dfm/ketu", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/ketu"}, {"uid": "github/dfm/exopop", "html_url": "https://rseng.github.io/software/repository/github/dfm/exopop", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/exopop"}, {"uid": "github/dfm/celerite", "html_url": "https://rseng.github.io/software/repository/github/dfm/celerite", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/celerite"}, {"uid": "github/dfm/corner.py", "html_url": "https://rseng.github.io/software/repository/github/dfm/corner.py", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/corner.py"}, {"uid": "github/ocean-eddy-cpt/gcm-filters", "html_url": "https://rseng.github.io/software/repository/github/ocean-eddy-cpt/gcm-filters", "api_url": "https://rseng.github.io/software/api/repos/github/ocean-eddy-cpt/gcm-filters"}, {"uid": "github/samuelmurail/af_analysis", "html_url": "https://rseng.github.io/software/repository/github/samuelmurail/af_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/samuelmurail/af_analysis"}, {"uid": "github/quinlanW/dbMisLoc", "html_url": "https://rseng.github.io/software/repository/github/quinlanW/dbMisLoc", "api_url": "https://rseng.github.io/software/api/repos/github/quinlanW/dbMisLoc"}, {"uid": "github/s2mLab/pyScienceMode", "html_url": "https://rseng.github.io/software/repository/github/s2mLab/pyScienceMode", "api_url": "https://rseng.github.io/software/api/repos/github/s2mLab/pyScienceMode"}, {"uid": "github/meantrix/corrp", "html_url": "https://rseng.github.io/software/repository/github/meantrix/corrp", "api_url": "https://rseng.github.io/software/api/repos/github/meantrix/corrp"}, {"uid": "github/nand1155/CausNet", "html_url": "https://rseng.github.io/software/repository/github/nand1155/CausNet", "api_url": "https://rseng.github.io/software/api/repos/github/nand1155/CausNet"}, {"uid": "github/bxskdh/TSTA", "html_url": "https://rseng.github.io/software/repository/github/bxskdh/TSTA", "api_url": "https://rseng.github.io/software/api/repos/github/bxskdh/TSTA"}, {"uid": "github/AlgoLab/shark", "html_url": "https://rseng.github.io/software/repository/github/AlgoLab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/AlgoLab/shark"}, {"uid": "github/inab/trimal", "html_url": "https://rseng.github.io/software/repository/github/inab/trimal", "api_url": "https://rseng.github.io/software/api/repos/github/inab/trimal"}, {"uid": "github/nextgenusfs/amptk", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/amptk", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/amptk"}, {"uid": "github/nextgenusfs/funannotate", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/funannotate", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/funannotate"}, {"uid": "github/atfrank/PyShifts", "html_url": "https://rseng.github.io/software/repository/github/atfrank/PyShifts", "api_url": "https://rseng.github.io/software/api/repos/github/atfrank/PyShifts"}, {"uid": "github/reproducible-biomedical-modeling/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/reproducible-biomedical-modeling/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/reproducible-biomedical-modeling/Biosimulations"}, {"uid": "github/PaulRitsche/DLTrack", "html_url": "https://rseng.github.io/software/repository/github/PaulRitsche/DLTrack", "api_url": "https://rseng.github.io/software/api/repos/github/PaulRitsche/DLTrack"}, {"uid": "github/YesselmanLab/rna_map", "html_url": "https://rseng.github.io/software/repository/github/YesselmanLab/rna_map", "api_url": "https://rseng.github.io/software/api/repos/github/YesselmanLab/rna_map"}, {"uid": "github/sebastian-zieba/PACMAN", "html_url": "https://rseng.github.io/software/repository/github/sebastian-zieba/PACMAN", "api_url": "https://rseng.github.io/software/api/repos/github/sebastian-zieba/PACMAN"}, {"uid": "github/vijayvarma392/binaryBHexp", "html_url": "https://rseng.github.io/software/repository/github/vijayvarma392/binaryBHexp", "api_url": "https://rseng.github.io/software/api/repos/github/vijayvarma392/binaryBHexp"}, {"uid": "github/baoxingsong/AnchorWave", "html_url": "https://rseng.github.io/software/repository/github/baoxingsong/AnchorWave", "api_url": "https://rseng.github.io/software/api/repos/github/baoxingsong/AnchorWave"}, {"uid": "github/jonas-fuchs/varVAMP", "html_url": "https://rseng.github.io/software/repository/github/jonas-fuchs/varVAMP", "api_url": "https://rseng.github.io/software/api/repos/github/jonas-fuchs/varVAMP"}, {"uid": "github/UK-Digital-Heart-Project/4Dsegment", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsegment", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsegment"}, {"uid": "github/UK-Digital-Heart-Project/4Dsurvival", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsurvival"}, {"uid": "github/damcb/tyssue", "html_url": "https://rseng.github.io/software/repository/github/damcb/tyssue", "api_url": "https://rseng.github.io/software/api/repos/github/damcb/tyssue"}, {"uid": "github/kateharborne/SimSpin", "html_url": "https://rseng.github.io/software/repository/github/kateharborne/SimSpin", "api_url": "https://rseng.github.io/software/api/repos/github/kateharborne/SimSpin"}, {"uid": "github/lcpp-org/RustBCA", "html_url": "https://rseng.github.io/software/repository/github/lcpp-org/RustBCA", "api_url": "https://rseng.github.io/software/api/repos/github/lcpp-org/RustBCA"}, {"uid": "github/blankhaar/PORTAL", "html_url": "https://rseng.github.io/software/repository/github/blankhaar/PORTAL", "api_url": "https://rseng.github.io/software/api/repos/github/blankhaar/PORTAL"}, {"uid": "github/dfujim/bfit", "html_url": "https://rseng.github.io/software/repository/github/dfujim/bfit", "api_url": "https://rseng.github.io/software/api/repos/github/dfujim/bfit"}, {"uid": "github/jiwoncpark/baobab", "html_url": "https://rseng.github.io/software/repository/github/jiwoncpark/baobab", "api_url": "https://rseng.github.io/software/api/repos/github/jiwoncpark/baobab"}, {"uid": "github/mnets/pymnet", "html_url": "https://rseng.github.io/software/repository/github/mnets/pymnet", "api_url": "https://rseng.github.io/software/api/repos/github/mnets/pymnet"}, {"uid": "github/astro-otter/otter", "html_url": "https://rseng.github.io/software/repository/github/astro-otter/otter", "api_url": "https://rseng.github.io/software/api/repos/github/astro-otter/otter"}, {"uid": "github/sorenwacker/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/sorenwacker/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/sorenwacker/ProteomicsQC"}, {"uid": "github/artefactory/choice-learn", "html_url": "https://rseng.github.io/software/repository/github/artefactory/choice-learn", "api_url": "https://rseng.github.io/software/api/repos/github/artefactory/choice-learn"}, {"uid": "github/abs-tudelft/variant-calling-at-scale", "html_url": "https://rseng.github.io/software/repository/github/abs-tudelft/variant-calling-at-scale", "api_url": "https://rseng.github.io/software/api/repos/github/abs-tudelft/variant-calling-at-scale"}, {"uid": "github/creanero/locus", "html_url": "https://rseng.github.io/software/repository/github/creanero/locus", "api_url": "https://rseng.github.io/software/api/repos/github/creanero/locus"}, {"uid": "github/BioMeCIS-Lab/OpenOmics", "html_url": "https://rseng.github.io/software/repository/github/BioMeCIS-Lab/OpenOmics", "api_url": "https://rseng.github.io/software/api/repos/github/BioMeCIS-Lab/OpenOmics"}, {"uid": "github/rsnemmen/BCES", "html_url": "https://rseng.github.io/software/repository/github/rsnemmen/BCES", "api_url": "https://rseng.github.io/software/api/repos/github/rsnemmen/BCES"}, {"uid": "github/yiling0210/APIR", "html_url": "https://rseng.github.io/software/repository/github/yiling0210/APIR", "api_url": "https://rseng.github.io/software/api/repos/github/yiling0210/APIR"}, {"uid": "github/qiankunzizairen/PanGIA", "html_url": "https://rseng.github.io/software/repository/github/qiankunzizairen/PanGIA", "api_url": "https://rseng.github.io/software/api/repos/github/qiankunzizairen/PanGIA"}, {"uid": "github/kathrinnp/DarkRayNet", "html_url": "https://rseng.github.io/software/repository/github/kathrinnp/DarkRayNet", "api_url": "https://rseng.github.io/software/api/repos/github/kathrinnp/DarkRayNet"}, {"uid": "github/jonaspleyer/cellular_raza", "html_url": "https://rseng.github.io/software/repository/github/jonaspleyer/cellular_raza", "api_url": "https://rseng.github.io/software/api/repos/github/jonaspleyer/cellular_raza"}, {"uid": "github/amusecode/amuse", "html_url": "https://rseng.github.io/software/repository/github/amusecode/amuse", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/amuse"}, {"uid": "github/amusecode/TRES", "html_url": "https://rseng.github.io/software/repository/github/amusecode/TRES", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/TRES"}, {"uid": "github/E3SM-Project/gdess", "html_url": "https://rseng.github.io/software/repository/github/E3SM-Project/gdess", "api_url": "https://rseng.github.io/software/api/repos/github/E3SM-Project/gdess"}, {"uid": "github/dixonlab/hic_breakfinder", "html_url": "https://rseng.github.io/software/repository/github/dixonlab/hic_breakfinder", "api_url": "https://rseng.github.io/software/api/repos/github/dixonlab/hic_breakfinder"}, {"uid": "github/xpsi-group/neost", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/neost", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/neost"}, {"uid": "github/xpsi-group/xpsi", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/xpsi", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/xpsi"}, {"uid": "github/meerklass/MeerFish", "html_url": "https://rseng.github.io/software/repository/github/meerklass/MeerFish", "api_url": "https://rseng.github.io/software/api/repos/github/meerklass/MeerFish"}, {"uid": "github/BioMedIA/MIRTK", "html_url": "https://rseng.github.io/software/repository/github/BioMedIA/MIRTK", "api_url": "https://rseng.github.io/software/api/repos/github/BioMedIA/MIRTK"}, {"uid": "github/eliotayache/GAMMA", "html_url": "https://rseng.github.io/software/repository/github/eliotayache/GAMMA", "api_url": "https://rseng.github.io/software/api/repos/github/eliotayache/GAMMA"}, {"uid": "github/jcombs1/blasr", "html_url": "https://rseng.github.io/software/repository/github/jcombs1/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/jcombs1/blasr"}, {"uid": "github/iric-soft/km", "html_url": "https://rseng.github.io/software/repository/github/iric-soft/km", "api_url": "https://rseng.github.io/software/api/repos/github/iric-soft/km"}, {"uid": "github/rhenanbartels/hrv", "html_url": "https://rseng.github.io/software/repository/github/rhenanbartels/hrv", "api_url": "https://rseng.github.io/software/api/repos/github/rhenanbartels/hrv"}, {"uid": "github/Juke34/AliNe", "html_url": "https://rseng.github.io/software/repository/github/Juke34/AliNe", "api_url": "https://rseng.github.io/software/api/repos/github/Juke34/AliNe"}, {"uid": "github/gerlero/foamlib", "html_url": "https://rseng.github.io/software/repository/github/gerlero/foamlib", "api_url": "https://rseng.github.io/software/api/repos/github/gerlero/foamlib"}, {"uid": "github/leigh2/cetra", "html_url": "https://rseng.github.io/software/repository/github/leigh2/cetra", "api_url": "https://rseng.github.io/software/api/repos/github/leigh2/cetra"}, {"uid": "github/astroml/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroml/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroml/gatspy"}, {"uid": "github/enveda/RPath", "html_url": "https://rseng.github.io/software/repository/github/enveda/RPath", "api_url": "https://rseng.github.io/software/api/repos/github/enveda/RPath"}, {"uid": "github/cullanhowlett/l-picola", "html_url": "https://rseng.github.io/software/repository/github/cullanhowlett/l-picola", "api_url": "https://rseng.github.io/software/api/repos/github/cullanhowlett/l-picola"}, {"uid": "github/MartianColonist/Cthulhu", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/Cthulhu", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/Cthulhu"}, {"uid": "github/MartianColonist/POSEIDON", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/POSEIDON", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/POSEIDON"}, {"uid": "github/GermanHeim/globalsearch-rs", "html_url": "https://rseng.github.io/software/repository/github/GermanHeim/globalsearch-rs", "api_url": "https://rseng.github.io/software/api/repos/github/GermanHeim/globalsearch-rs"}, {"uid": "github/arjunsavel/cortecs", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/cortecs", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/cortecs"}, {"uid": "github/arjunsavel/SImMER", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/SImMER", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/SImMER"}, {"uid": "github/Yida-Lin/libxdf", "html_url": "https://rseng.github.io/software/repository/github/Yida-Lin/libxdf", "api_url": "https://rseng.github.io/software/api/repos/github/Yida-Lin/libxdf"}, {"uid": "github/wjakethompson/measr", "html_url": "https://rseng.github.io/software/repository/github/wjakethompson/measr", "api_url": "https://rseng.github.io/software/api/repos/github/wjakethompson/measr"}, {"uid": "github/kylemede/ExoSOFT", "html_url": "https://rseng.github.io/software/repository/github/kylemede/ExoSOFT", "api_url": "https://rseng.github.io/software/api/repos/github/kylemede/ExoSOFT"}, {"uid": "github/lllangWV/ParquetDB", "html_url": "https://rseng.github.io/software/repository/github/lllangWV/ParquetDB", "api_url": "https://rseng.github.io/software/api/repos/github/lllangWV/ParquetDB"}, {"uid": "github/Aravind-Sundararajan/MocoExtendProblem", "html_url": "https://rseng.github.io/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", "api_url": "https://rseng.github.io/software/api/repos/github/Aravind-Sundararajan/MocoExtendProblem"}, {"uid": "github/cython/cython", "html_url": "https://rseng.github.io/software/repository/github/cython/cython", "api_url": "https://rseng.github.io/software/api/repos/github/cython/cython"}, {"uid": "github/AstroVPK/kali", "html_url": "https://rseng.github.io/software/repository/github/AstroVPK/kali", "api_url": "https://rseng.github.io/software/api/repos/github/AstroVPK/kali"}, {"uid": "github/Effective-Quadratures/Effective-Quadratures", "html_url": "https://rseng.github.io/software/repository/github/Effective-Quadratures/Effective-Quadratures", "api_url": "https://rseng.github.io/software/api/repos/github/Effective-Quadratures/Effective-Quadratures"}, {"uid": "github/nanograv/PINT", "html_url": "https://rseng.github.io/software/repository/github/nanograv/PINT", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/PINT"}, {"uid": "github/nanograv/enterprise", "html_url": "https://rseng.github.io/software/repository/github/nanograv/enterprise", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/enterprise"}, {"uid": "github/HengyueZ/astrofix", "html_url": "https://rseng.github.io/software/repository/github/HengyueZ/astrofix", "api_url": "https://rseng.github.io/software/api/repos/github/HengyueZ/astrofix"}, {"uid": "github/complextissue/pytximport", "html_url": "https://rseng.github.io/software/repository/github/complextissue/pytximport", "api_url": "https://rseng.github.io/software/api/repos/github/complextissue/pytximport"}, {"uid": "github/gilestrolab/ethoscope", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/ethoscope", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/ethoscope"}, {"uid": "github/gilestrolab/pySolo", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/pySolo", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/pySolo"}, {"uid": "github/xragua/xraybinaryorbit", "html_url": "https://rseng.github.io/software/repository/github/xragua/xraybinaryorbit", "api_url": "https://rseng.github.io/software/api/repos/github/xragua/xraybinaryorbit"}, {"uid": "github/fluhus/blini", "html_url": "https://rseng.github.io/software/repository/github/fluhus/blini", "api_url": "https://rseng.github.io/software/api/repos/github/fluhus/blini"}, {"uid": "github/BoPeng/simuPOP", "html_url": "https://rseng.github.io/software/repository/github/BoPeng/simuPOP", "api_url": "https://rseng.github.io/software/api/repos/github/BoPeng/simuPOP"}, {"uid": "github/PyTables/PyTables", "html_url": "https://rseng.github.io/software/repository/github/PyTables/PyTables", "api_url": "https://rseng.github.io/software/api/repos/github/PyTables/PyTables"}, {"uid": "github/AndresRTejedor/Mold", "html_url": "https://rseng.github.io/software/repository/github/AndresRTejedor/Mold", "api_url": "https://rseng.github.io/software/api/repos/github/AndresRTejedor/Mold"}, {"uid": "github/silburt/DeepMoon", "html_url": "https://rseng.github.io/software/repository/github/silburt/DeepMoon", "api_url": "https://rseng.github.io/software/api/repos/github/silburt/DeepMoon"}, {"uid": "github/imr-framework/OCTOPUS", "html_url": "https://rseng.github.io/software/repository/github/imr-framework/OCTOPUS", "api_url": "https://rseng.github.io/software/api/repos/github/imr-framework/OCTOPUS"}, {"uid": "github/dgarrimar/sqtlseeker2-nf", "html_url": "https://rseng.github.io/software/repository/github/dgarrimar/sqtlseeker2-nf", "api_url": "https://rseng.github.io/software/api/repos/github/dgarrimar/sqtlseeker2-nf"}, {"uid": "github/hyosubkim/bayes-toolbox", "html_url": "https://rseng.github.io/software/repository/github/hyosubkim/bayes-toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/hyosubkim/bayes-toolbox"}, {"uid": "github/haiyang1986/TVAR", "html_url": "https://rseng.github.io/software/repository/github/haiyang1986/TVAR", "api_url": "https://rseng.github.io/software/api/repos/github/haiyang1986/TVAR"}, {"uid": "github/LiShuTJ/NDNet", "html_url": "https://rseng.github.io/software/repository/github/LiShuTJ/NDNet", "api_url": "https://rseng.github.io/software/api/repos/github/LiShuTJ/NDNet"}, {"uid": "github/AarhusCosmology/connect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/connect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/connect_public"}, {"uid": "github/AarhusCosmology/prospect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/prospect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/prospect_public"}, {"uid": "github/BartoszBartmanski/StoSpa2", "html_url": "https://rseng.github.io/software/repository/github/BartoszBartmanski/StoSpa2", "api_url": "https://rseng.github.io/software/api/repos/github/BartoszBartmanski/StoSpa2"}, {"uid": "github/davidechicco/geneExpressionFromGEO", "html_url": "https://rseng.github.io/software/repository/github/davidechicco/geneExpressionFromGEO", "api_url": "https://rseng.github.io/software/api/repos/github/davidechicco/geneExpressionFromGEO"}, {"uid": "github/UncertainLab/Enlsip.jl", "html_url": "https://rseng.github.io/software/repository/github/UncertainLab/Enlsip.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UncertainLab/Enlsip.jl"}, {"uid": "github/CDSP-SCPO/metadata-middleware", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/metadata-middleware", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/metadata-middleware"}, {"uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/WPSS-for-ESS-webpanel"}, {"uid": "github/CDSP-SCPO/dataverse-feed", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/dataverse-feed", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/dataverse-feed"}, {"uid": "github/Eventdisplay/Eventdisplay", "html_url": "https://rseng.github.io/software/repository/github/Eventdisplay/Eventdisplay", "api_url": "https://rseng.github.io/software/api/repos/github/Eventdisplay/Eventdisplay"}, {"uid": "github/s-goldman/Dusty-Evolved-Star-Kit", "html_url": "https://rseng.github.io/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", "api_url": "https://rseng.github.io/software/api/repos/github/s-goldman/Dusty-Evolved-Star-Kit"}, {"uid": "github/ixakalabadie/ViSL3D", "html_url": "https://rseng.github.io/software/repository/github/ixakalabadie/ViSL3D", "api_url": "https://rseng.github.io/software/api/repos/github/ixakalabadie/ViSL3D"}, {"uid": "github/NERDSITU/superblockify", "html_url": "https://rseng.github.io/software/repository/github/NERDSITU/superblockify", "api_url": "https://rseng.github.io/software/api/repos/github/NERDSITU/superblockify"}, {"uid": "github/aksholokhov/pysr3", "html_url": "https://rseng.github.io/software/repository/github/aksholokhov/pysr3", "api_url": "https://rseng.github.io/software/api/repos/github/aksholokhov/pysr3"}, {"uid": "github/cma2015/iwa-miRNA", "html_url": "https://rseng.github.io/software/repository/github/cma2015/iwa-miRNA", "api_url": "https://rseng.github.io/software/api/repos/github/cma2015/iwa-miRNA"}, {"uid": "github/elizakempton/Exo_Transmit", "html_url": "https://rseng.github.io/software/repository/github/elizakempton/Exo_Transmit", "api_url": "https://rseng.github.io/software/api/repos/github/elizakempton/Exo_Transmit"}, {"uid": "github/mariakotouza/TRIP-Tool", "html_url": "https://rseng.github.io/software/repository/github/mariakotouza/TRIP-Tool", "api_url": "https://rseng.github.io/software/api/repos/github/mariakotouza/TRIP-Tool"}, {"uid": "github/CEA-MetroCarac/pystack3d", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/pystack3d", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/pystack3d"}, {"uid": "github/CEA-MetroCarac/fitspy", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/fitspy", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/fitspy"}, {"uid": "github/pni-lab/mlconfound", "html_url": "https://rseng.github.io/software/repository/github/pni-lab/mlconfound", "api_url": "https://rseng.github.io/software/api/repos/github/pni-lab/mlconfound"}, {"uid": "github/aprsa/ebai", "html_url": "https://rseng.github.io/software/repository/github/aprsa/ebai", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/ebai"}, {"uid": "github/aprsa/dips", "html_url": "https://rseng.github.io/software/repository/github/aprsa/dips", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/dips"}, {"uid": "github/neslusan/BELTCROSS2", "html_url": "https://rseng.github.io/software/repository/github/neslusan/BELTCROSS2", "api_url": "https://rseng.github.io/software/api/repos/github/neslusan/BELTCROSS2"}, {"uid": "github/ntveem/sterile-dm", "html_url": "https://rseng.github.io/software/repository/github/ntveem/sterile-dm", "api_url": "https://rseng.github.io/software/api/repos/github/ntveem/sterile-dm"}, {"uid": "github/astrobrent/itera", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/itera", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/itera"}, {"uid": "github/astrobrent/mappings", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/mappings", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/mappings"}, {"uid": "github/radicamc/applesoss", "html_url": "https://rseng.github.io/software/repository/github/radicamc/applesoss", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/applesoss"}, {"uid": "github/radicamc/exoTEDRF", "html_url": "https://rseng.github.io/software/repository/github/radicamc/exoTEDRF", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/exoTEDRF"}, {"uid": "github/mariapetro/LeHaMoC", "html_url": "https://rseng.github.io/software/repository/github/mariapetro/LeHaMoC", "api_url": "https://rseng.github.io/software/api/repos/github/mariapetro/LeHaMoC"}, {"uid": "github/davtsang/slimplectic", "html_url": "https://rseng.github.io/software/repository/github/davtsang/slimplectic", "api_url": "https://rseng.github.io/software/api/repos/github/davtsang/slimplectic"}, {"uid": "github/sashakolpakov/dire-jax", "html_url": "https://rseng.github.io/software/repository/github/sashakolpakov/dire-jax", "api_url": "https://rseng.github.io/software/api/repos/github/sashakolpakov/dire-jax"}, {"uid": "github/latrop/DECA", "html_url": "https://rseng.github.io/software/repository/github/latrop/DECA", "api_url": "https://rseng.github.io/software/api/repos/github/latrop/DECA"}, {"uid": "github/moeyensj/atm", "html_url": "https://rseng.github.io/software/repository/github/moeyensj/atm", "api_url": "https://rseng.github.io/software/api/repos/github/moeyensj/atm"}, {"uid": "github/genouest/biomaj-cli", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-cli"}, {"uid": "github/genouest/biomaj-daemon", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-daemon", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-daemon"}, {"uid": "github/ABard0/MDGF-MCEC", "html_url": "https://rseng.github.io/software/repository/github/ABard0/MDGF-MCEC", "api_url": "https://rseng.github.io/software/api/repos/github/ABard0/MDGF-MCEC"}, {"uid": "github/pangenome/smoothxg", "html_url": "https://rseng.github.io/software/repository/github/pangenome/smoothxg", "api_url": "https://rseng.github.io/software/api/repos/github/pangenome/smoothxg"}, {"uid": "github/ewanbarr/peasoup", "html_url": "https://rseng.github.io/software/repository/github/ewanbarr/peasoup", "api_url": "https://rseng.github.io/software/api/repos/github/ewanbarr/peasoup"}, {"uid": "github/Lyalpha/spalipy", "html_url": "https://rseng.github.io/software/repository/github/Lyalpha/spalipy", "api_url": "https://rseng.github.io/software/api/repos/github/Lyalpha/spalipy"}, {"uid": "github/OrlandoLam/SAMT", "html_url": "https://rseng.github.io/software/repository/github/OrlandoLam/SAMT", "api_url": "https://rseng.github.io/software/api/repos/github/OrlandoLam/SAMT"}, {"uid": "github/danielemichilli/DM_phase", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/DM_phase", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/DM_phase"}, {"uid": "github/danielemichilli/SpS", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/SpS", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/SpS"}, {"uid": "github/PetroFit/petrofit", "html_url": "https://rseng.github.io/software/repository/github/PetroFit/petrofit", "api_url": "https://rseng.github.io/software/api/repos/github/PetroFit/petrofit"}, {"uid": "github/sodascience/metasyn", "html_url": "https://rseng.github.io/software/repository/github/sodascience/metasyn", "api_url": "https://rseng.github.io/software/api/repos/github/sodascience/metasyn"}, {"uid": "github/TeaspoonTDA/teaspoon", "html_url": "https://rseng.github.io/software/repository/github/TeaspoonTDA/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/github/TeaspoonTDA/teaspoon"}, {"uid": "github/wordsworthgroup/mars_redox_2021", "html_url": "https://rseng.github.io/software/repository/github/wordsworthgroup/mars_redox_2021", "api_url": "https://rseng.github.io/software/api/repos/github/wordsworthgroup/mars_redox_2021"}, {"uid": "github/ishinder/EASTR", "html_url": "https://rseng.github.io/software/repository/github/ishinder/EASTR", "api_url": "https://rseng.github.io/software/api/repos/github/ishinder/EASTR"}, {"uid": "github/jupyterlab/jupyterlab", "html_url": "https://rseng.github.io/software/repository/github/jupyterlab/jupyterlab", "api_url": "https://rseng.github.io/software/api/repos/github/jupyterlab/jupyterlab"}, {"uid": "github/MD-Studio/MDStudio", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/MDStudio", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/MDStudio"}, {"uid": "github/MD-Studio/cerise", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerise", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerise"}, {"uid": "github/MD-Studio/cerulean", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerulean", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerulean"}, {"uid": "github/ACCarnall/SpectRes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/SpectRes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/SpectRes"}, {"uid": "github/ACCarnall/bagpipes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/bagpipes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/bagpipes"}, {"uid": "github/dstansby/pfsspy", "html_url": "https://rseng.github.io/software/repository/github/dstansby/pfsspy", "api_url": "https://rseng.github.io/software/api/repos/github/dstansby/pfsspy"}, {"uid": "github/yaml2sbml-dev/yaml2sbml", "html_url": "https://rseng.github.io/software/repository/github/yaml2sbml-dev/yaml2sbml", "api_url": "https://rseng.github.io/software/api/repos/github/yaml2sbml-dev/yaml2sbml"}, {"uid": "github/Sydney-Informatics-Hub/OmixLitMiner", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/OmixLitMiner"}, {"uid": "github/Sydney-Informatics-Hub/geodata-harvester", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/geodata-harvester"}, {"uid": "github/sap218/jabberwocky", "html_url": "https://rseng.github.io/software/repository/github/sap218/jabberwocky", "api_url": "https://rseng.github.io/software/api/repos/github/sap218/jabberwocky"}, {"uid": "github/kwkx/IPRP", "html_url": "https://rseng.github.io/software/repository/github/kwkx/IPRP", "api_url": "https://rseng.github.io/software/api/repos/github/kwkx/IPRP"}, {"uid": "github/jan-rybizki/gdr2_completeness", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/gdr2_completeness", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/gdr2_completeness"}, {"uid": "github/jan-rybizki/Chempy", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Chempy", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Chempy"}, {"uid": "github/jan-rybizki/Galaxia_wrap", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Galaxia_wrap", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Galaxia_wrap"}, {"uid": "github/Rnazx/Scaling-Relations", "html_url": "https://rseng.github.io/software/repository/github/Rnazx/Scaling-Relations", "api_url": "https://rseng.github.io/software/api/repos/github/Rnazx/Scaling-Relations"}, {"uid": "github/Social-Evolution-and-Behavior/anTraX", "html_url": "https://rseng.github.io/software/repository/github/Social-Evolution-and-Behavior/anTraX", "api_url": "https://rseng.github.io/software/api/repos/github/Social-Evolution-and-Behavior/anTraX"}, {"uid": "github/remingtonsexton/BADASS3", "html_url": "https://rseng.github.io/software/repository/github/remingtonsexton/BADASS3", "api_url": "https://rseng.github.io/software/api/repos/github/remingtonsexton/BADASS3"}, {"uid": "github/ValeevGroup/mpqc", "html_url": "https://rseng.github.io/software/repository/github/ValeevGroup/mpqc", "api_url": "https://rseng.github.io/software/api/repos/github/ValeevGroup/mpqc"}, {"uid": "github/igrins/plp", "html_url": "https://rseng.github.io/software/repository/github/igrins/plp", "api_url": "https://rseng.github.io/software/api/repos/github/igrins/plp"}, {"uid": "github/slacgismo/solar-data-tools", "html_url": "https://rseng.github.io/software/repository/github/slacgismo/solar-data-tools", "api_url": "https://rseng.github.io/software/api/repos/github/slacgismo/solar-data-tools"}, {"uid": "github/HWang-Summit/HCGrid", "html_url": "https://rseng.github.io/software/repository/github/HWang-Summit/HCGrid", "api_url": "https://rseng.github.io/software/api/repos/github/HWang-Summit/HCGrid"}, {"uid": "github/a-renzini/pygwb", "html_url": "https://rseng.github.io/software/repository/github/a-renzini/pygwb", "api_url": "https://rseng.github.io/software/api/repos/github/a-renzini/pygwb"}, {"uid": "github/stemangiola/tidyHeatmap", "html_url": "https://rseng.github.io/software/repository/github/stemangiola/tidyHeatmap", "api_url": "https://rseng.github.io/software/api/repos/github/stemangiola/tidyHeatmap"}, {"uid": "github/rikenbit/dcTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/dcTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/dcTensor"}, {"uid": "github/rikenbit/OnlinePCA.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlinePCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlinePCA.jl"}, {"uid": "github/rikenbit/OnlineNMF.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlineNMF.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlineNMF.jl"}, {"uid": "github/rikenbit/iTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/iTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/iTensor"}, {"uid": "github/rikenbit/nnTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/nnTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/nnTensor"}, {"uid": "github/tscnlab/LightLogR", "html_url": "https://rseng.github.io/software/repository/github/tscnlab/LightLogR", "api_url": "https://rseng.github.io/software/api/repos/github/tscnlab/LightLogR"}, {"uid": "github/laurazara/IgIDivA", "html_url": "https://rseng.github.io/software/repository/github/laurazara/IgIDivA", "api_url": "https://rseng.github.io/software/api/repos/github/laurazara/IgIDivA"}, {"uid": "github/Feng-Ji-Lab/FedIRT", "html_url": "https://rseng.github.io/software/repository/github/Feng-Ji-Lab/FedIRT", "api_url": "https://rseng.github.io/software/api/repos/github/Feng-Ji-Lab/FedIRT"}, {"uid": "github/ccsb-scripps/Illustrate", "html_url": "https://rseng.github.io/software/repository/github/ccsb-scripps/Illustrate", "api_url": "https://rseng.github.io/software/api/repos/github/ccsb-scripps/Illustrate"}, {"uid": "github/kennethcarrell/ATARRI", "html_url": "https://rseng.github.io/software/repository/github/kennethcarrell/ATARRI", "api_url": "https://rseng.github.io/software/api/repos/github/kennethcarrell/ATARRI"}, {"uid": "github/ziyewang/ARG_SHINE", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/ARG_SHINE", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/ARG_SHINE"}, {"uid": "github/ziyewang/MetaBinner", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/MetaBinner", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/MetaBinner"}, {"uid": "github/JunTaoLuo/mctreesearch4j", "html_url": "https://rseng.github.io/software/repository/github/JunTaoLuo/mctreesearch4j", "api_url": "https://rseng.github.io/software/api/repos/github/JunTaoLuo/mctreesearch4j"}, {"uid": "github/Danko-Lab/dREG", "html_url": "https://rseng.github.io/software/repository/github/Danko-Lab/dREG", "api_url": "https://rseng.github.io/software/api/repos/github/Danko-Lab/dREG"}, {"uid": "github/mrc-ide/sircovid", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/sircovid", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/sircovid"}, {"uid": "github/mrc-ide/covid19-forecasts-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid19-forecasts-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid19-forecasts-orderly"}, {"uid": "github/mrc-ide/global-lmic-reports-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/global-lmic-reports-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/global-lmic-reports-orderly"}, {"uid": "github/mrc-ide/dde", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dde", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dde"}, {"uid": "github/mrc-ide/drjacoby", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/drjacoby", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/drjacoby"}, {"uid": "github/mrc-ide/rrq", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/rrq", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/rrq"}, {"uid": "github/mrc-ide/PhyDyn", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PhyDyn", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PhyDyn"}, {"uid": "github/mrc-ide/EpiEstim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/EpiEstim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/EpiEstim"}, {"uid": "github/mrc-ide/provisionr", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/provisionr", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/provisionr"}, {"uid": "github/mrc-ide/cinterpolate", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/cinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/cinterpolate"}, {"uid": "github/mrc-ide/dust", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dust", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dust"}, {"uid": "github/mrc-ide/odin", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/odin", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/odin"}, {"uid": "github/mrc-ide/PlasmoMAPI", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PlasmoMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PlasmoMAPI"}, {"uid": "github/mrc-ide/individual", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/individual", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/individual"}, {"uid": "github/mrc-ide/covid-sim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid-sim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid-sim"}, {"uid": "github/mrc-ide/ring", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/ring", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/ring"}, {"uid": "github/mrc-ide/squire", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/squire", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/squire"}, {"uid": "github/huanghua1994/HiGP", "html_url": "https://rseng.github.io/software/repository/github/huanghua1994/HiGP", "api_url": "https://rseng.github.io/software/api/repos/github/huanghua1994/HiGP"}, {"uid": "github/ByrumLab/proteoDA", "html_url": "https://rseng.github.io/software/repository/github/ByrumLab/proteoDA", "api_url": "https://rseng.github.io/software/api/repos/github/ByrumLab/proteoDA"}, {"uid": "github/nkhorshid/simab", "html_url": "https://rseng.github.io/software/repository/github/nkhorshid/simab", "api_url": "https://rseng.github.io/software/api/repos/github/nkhorshid/simab"}, {"uid": "github/alphapsa/PIPE", "html_url": "https://rseng.github.io/software/repository/github/alphapsa/PIPE", "api_url": "https://rseng.github.io/software/api/repos/github/alphapsa/PIPE"}, {"uid": "github/antismash/antismash", "html_url": "https://rseng.github.io/software/repository/github/antismash/antismash", "api_url": "https://rseng.github.io/software/api/repos/github/antismash/antismash"}, {"uid": "github/haowang-astro/jetsimpy", "html_url": "https://rseng.github.io/software/repository/github/haowang-astro/jetsimpy", "api_url": "https://rseng.github.io/software/api/repos/github/haowang-astro/jetsimpy"}, {"uid": "github/tkonolige/city2ba", "html_url": "https://rseng.github.io/software/repository/github/tkonolige/city2ba", "api_url": "https://rseng.github.io/software/api/repos/github/tkonolige/city2ba"}, {"uid": "github/tylertrimble/viswaternet", "html_url": "https://rseng.github.io/software/repository/github/tylertrimble/viswaternet", "api_url": "https://rseng.github.io/software/api/repos/github/tylertrimble/viswaternet"}, {"uid": "github/bluenote-1577/fairy", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/fairy", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/fairy"}, {"uid": "github/bluenote-1577/sylph", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/sylph", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/sylph"}, {"uid": "github/neuroneural/brainchop", "html_url": "https://rseng.github.io/software/repository/github/neuroneural/brainchop", "api_url": "https://rseng.github.io/software/api/repos/github/neuroneural/brainchop"}, {"uid": "github/sidiwang/snSMART", "html_url": "https://rseng.github.io/software/repository/github/sidiwang/snSMART", "api_url": "https://rseng.github.io/software/api/repos/github/sidiwang/snSMART"}, {"uid": "github/fatmasevinck/enetLTS", "html_url": "https://rseng.github.io/software/repository/github/fatmasevinck/enetLTS", "api_url": "https://rseng.github.io/software/api/repos/github/fatmasevinck/enetLTS"}, {"uid": "github/haoharryfeng/NeuCA", "html_url": "https://rseng.github.io/software/repository/github/haoharryfeng/NeuCA", "api_url": "https://rseng.github.io/software/api/repos/github/haoharryfeng/NeuCA"}, {"uid": "github/psi4/psi4", "html_url": "https://rseng.github.io/software/repository/github/psi4/psi4", "api_url": "https://rseng.github.io/software/api/repos/github/psi4/psi4"}, {"uid": "github/exoml/plan-net", "html_url": "https://rseng.github.io/software/repository/github/exoml/plan-net", "api_url": "https://rseng.github.io/software/api/repos/github/exoml/plan-net"}, {"uid": "github/gerddie/maxflow", "html_url": "https://rseng.github.io/software/repository/github/gerddie/maxflow", "api_url": "https://rseng.github.io/software/api/repos/github/gerddie/maxflow"}, {"uid": "github/GrainLearning/grainLearning", "html_url": "https://rseng.github.io/software/repository/github/GrainLearning/grainLearning", "api_url": "https://rseng.github.io/software/api/repos/github/GrainLearning/grainLearning"}, {"uid": "github/ajshajib/dolphin", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/dolphin"}, {"uid": "github/ajshajib/LensingETC", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/LensingETC", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/LensingETC"}, {"uid": "github/RiccardoBiondi/segmentation", "html_url": "https://rseng.github.io/software/repository/github/RiccardoBiondi/segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/RiccardoBiondi/segmentation"}, {"uid": "github/ELELAB/RosettaDDGPrediction", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/RosettaDDGPrediction", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/RosettaDDGPrediction"}, {"uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP"}, {"uid": "github/ELELAB/LipidDyn", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/LipidDyn", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/LipidDyn"}, {"uid": "github/ELELAB/cancermuts", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/cancermuts", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/cancermuts"}, {"uid": "github/kmkuesters/pooledpeaks", "html_url": "https://rseng.github.io/software/repository/github/kmkuesters/pooledpeaks", "api_url": "https://rseng.github.io/software/api/repos/github/kmkuesters/pooledpeaks"}, {"uid": "github/jianlin-cheng/DRCon", "html_url": "https://rseng.github.io/software/repository/github/jianlin-cheng/DRCon", "api_url": "https://rseng.github.io/software/api/repos/github/jianlin-cheng/DRCon"}, {"uid": "github/OpenHPS/openhps-core", "html_url": "https://rseng.github.io/software/repository/github/OpenHPS/openhps-core", "api_url": "https://rseng.github.io/software/api/repos/github/OpenHPS/openhps-core"}, {"uid": "github/miriamkw/GluPredKit", "html_url": "https://rseng.github.io/software/repository/github/miriamkw/GluPredKit", "api_url": "https://rseng.github.io/software/api/repos/github/miriamkw/GluPredKit"}, {"uid": "github/ahmedmoustafa/JAligner", "html_url": "https://rseng.github.io/software/repository/github/ahmedmoustafa/JAligner", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmoustafa/JAligner"}, {"uid": "github/MedMaxLab/selfEEG", "html_url": "https://rseng.github.io/software/repository/github/MedMaxLab/selfEEG", "api_url": "https://rseng.github.io/software/api/repos/github/MedMaxLab/selfEEG"}, {"uid": "github/malonge/RagTag", "html_url": "https://rseng.github.io/software/repository/github/malonge/RagTag", "api_url": "https://rseng.github.io/software/api/repos/github/malonge/RagTag"}, {"uid": "github/niess/calzone", "html_url": "https://rseng.github.io/software/repository/github/niess/calzone", "api_url": "https://rseng.github.io/software/api/repos/github/niess/calzone"}, {"uid": "github/LiesaSalzer/MobilityTransformR", "html_url": "https://rseng.github.io/software/repository/github/LiesaSalzer/MobilityTransformR", "api_url": "https://rseng.github.io/software/api/repos/github/LiesaSalzer/MobilityTransformR"}, {"uid": "github/gully/blase", "html_url": "https://rseng.github.io/software/repository/github/gully/blase", "api_url": "https://rseng.github.io/software/api/repos/github/gully/blase"}, {"uid": "github/aqlaboratory/openfold", "html_url": "https://rseng.github.io/software/repository/github/aqlaboratory/openfold", "api_url": "https://rseng.github.io/software/api/repos/github/aqlaboratory/openfold"}, {"uid": "github/ranocha/SummationByPartsOperators.jl", "html_url": "https://rseng.github.io/software/repository/github/ranocha/SummationByPartsOperators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ranocha/SummationByPartsOperators.jl"}, {"uid": "github/reggiebernardo/PTAfast", "html_url": "https://rseng.github.io/software/repository/github/reggiebernardo/PTAfast", "api_url": "https://rseng.github.io/software/api/repos/github/reggiebernardo/PTAfast"}, {"uid": "github/mdshw5/pyfaidx", "html_url": "https://rseng.github.io/software/repository/github/mdshw5/pyfaidx", "api_url": "https://rseng.github.io/software/api/repos/github/mdshw5/pyfaidx"}, {"uid": "github/rezeebe/orbitN", "html_url": "https://rseng.github.io/software/repository/github/rezeebe/orbitN", "api_url": "https://rseng.github.io/software/api/repos/github/rezeebe/orbitN"}, {"uid": "github/pilon/wiki", "html_url": "https://rseng.github.io/software/repository/github/pilon/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/pilon/wiki"}, {"uid": "github/masoncarney/stepped_luneburg", "html_url": "https://rseng.github.io/software/repository/github/masoncarney/stepped_luneburg", "api_url": "https://rseng.github.io/software/api/repos/github/masoncarney/stepped_luneburg"}, {"uid": "github/pmlmodelling/nctoolkit", "html_url": "https://rseng.github.io/software/repository/github/pmlmodelling/nctoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/pmlmodelling/nctoolkit"}, {"uid": "github/BarquistLab/mason_paper", "html_url": "https://rseng.github.io/software/repository/github/BarquistLab/mason_paper", "api_url": "https://rseng.github.io/software/api/repos/github/BarquistLab/mason_paper"}, {"uid": "github/epi2me-labs/mapula", "html_url": "https://rseng.github.io/software/repository/github/epi2me-labs/mapula", "api_url": "https://rseng.github.io/software/api/repos/github/epi2me-labs/mapula"}, {"uid": "github/uab-cgds-worthey/quac", "html_url": "https://rseng.github.io/software/repository/github/uab-cgds-worthey/quac", "api_url": "https://rseng.github.io/software/api/repos/github/uab-cgds-worthey/quac"}, {"uid": "github/idptools/metapredict", "html_url": "https://rseng.github.io/software/repository/github/idptools/metapredict", "api_url": "https://rseng.github.io/software/api/repos/github/idptools/metapredict"}, {"uid": "github/tensorflow/tensorflow", "html_url": "https://rseng.github.io/software/repository/github/tensorflow/tensorflow", "api_url": "https://rseng.github.io/software/api/repos/github/tensorflow/tensorflow"}, {"uid": "github/eucp-project/storyboards", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/storyboards", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/storyboards"}, {"uid": "github/eucp-project/atlas", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/atlas", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/atlas"}, {"uid": "github/phelelani/nf-rnaSeqCount", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqCount", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqCount"}, {"uid": "github/phelelani/nf-rnaSeqMetagen", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqMetagen", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqMetagen"}, {"uid": "github/pnsaevik/effluent", "html_url": "https://rseng.github.io/software/repository/github/pnsaevik/effluent", "api_url": "https://rseng.github.io/software/api/repos/github/pnsaevik/effluent"}, {"uid": "github/ExoSim/ExoSimPublic", "html_url": "https://rseng.github.io/software/repository/github/ExoSim/ExoSimPublic", "api_url": "https://rseng.github.io/software/api/repos/github/ExoSim/ExoSimPublic"}, {"uid": "github/benmontet/f3", "html_url": "https://rseng.github.io/software/repository/github/benmontet/f3", "api_url": "https://rseng.github.io/software/api/repos/github/benmontet/f3"}, {"uid": "github/OpenMS/pyopenms-extra", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/pyopenms-extra", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/pyopenms-extra"}, {"uid": "github/OpenMS/OpenMS", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/OpenMS", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/OpenMS"}, {"uid": "github/trinotate/trinotatehub.io", "html_url": "https://rseng.github.io/software/repository/github/trinotate/trinotatehub.io", "api_url": "https://rseng.github.io/software/api/repos/github/trinotate/trinotatehub.io"}, {"uid": "github/jiffyclub/palettable", "html_url": "https://rseng.github.io/software/repository/github/jiffyclub/palettable", "api_url": "https://rseng.github.io/software/api/repos/github/jiffyclub/palettable"}, {"uid": "github/mdsteiner/EFAtools", "html_url": "https://rseng.github.io/software/repository/github/mdsteiner/EFAtools", "api_url": "https://rseng.github.io/software/api/repos/github/mdsteiner/EFAtools"}, {"uid": "github/tuoyl/tat-pulsar", "html_url": "https://rseng.github.io/software/repository/github/tuoyl/tat-pulsar", "api_url": "https://rseng.github.io/software/api/repos/github/tuoyl/tat-pulsar"}, {"uid": "github/gorpipe/gor", "html_url": "https://rseng.github.io/software/repository/github/gorpipe/gor", "api_url": "https://rseng.github.io/software/api/repos/github/gorpipe/gor"}, {"uid": "github/QTC-UMD/rydiqule", "html_url": "https://rseng.github.io/software/repository/github/QTC-UMD/rydiqule", "api_url": "https://rseng.github.io/software/api/repos/github/QTC-UMD/rydiqule"}, {"uid": "github/natashabatalha/PandExo", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/PandExo", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/PandExo"}, {"uid": "github/natashabatalha/picaso", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/picaso", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/picaso"}, {"uid": "github/rbrthogan/GAz", "html_url": "https://rseng.github.io/software/repository/github/rbrthogan/GAz", "api_url": "https://rseng.github.io/software/api/repos/github/rbrthogan/GAz"}, {"uid": "github/IKNL/vantage6", "html_url": "https://rseng.github.io/software/repository/github/IKNL/vantage6", "api_url": "https://rseng.github.io/software/api/repos/github/IKNL/vantage6"}, {"uid": "github/astro-group-bristol/Gradus.jl", "html_url": "https://rseng.github.io/software/repository/github/astro-group-bristol/Gradus.jl", "api_url": "https://rseng.github.io/software/api/repos/github/astro-group-bristol/Gradus.jl"}, {"uid": "github/vterron/lemon", "html_url": "https://rseng.github.io/software/repository/github/vterron/lemon", "api_url": "https://rseng.github.io/software/api/repos/github/vterron/lemon"}, {"uid": "github/nvalimak/fsm-lite", "html_url": "https://rseng.github.io/software/repository/github/nvalimak/fsm-lite", "api_url": "https://rseng.github.io/software/api/repos/github/nvalimak/fsm-lite"}, {"uid": "github/mlipatov/paint_atmospheres", "html_url": "https://rseng.github.io/software/repository/github/mlipatov/paint_atmospheres", "api_url": "https://rseng.github.io/software/api/repos/github/mlipatov/paint_atmospheres"}, {"uid": "github/cy-xu/cosmic-conn", "html_url": "https://rseng.github.io/software/repository/github/cy-xu/cosmic-conn", "api_url": "https://rseng.github.io/software/api/repos/github/cy-xu/cosmic-conn"}, {"uid": "github/lorenzo-rovigatti/oxDNA", "html_url": "https://rseng.github.io/software/repository/github/lorenzo-rovigatti/oxDNA", "api_url": "https://rseng.github.io/software/api/repos/github/lorenzo-rovigatti/oxDNA"}, {"uid": "github/matteobachetti/TOAextractor", "html_url": "https://rseng.github.io/software/repository/github/matteobachetti/TOAextractor", "api_url": "https://rseng.github.io/software/api/repos/github/matteobachetti/TOAextractor"}, {"uid": "github/sintefore/TimeStruct.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefore/TimeStruct.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefore/TimeStruct.jl"}, {"uid": "github/GoekeLab/xpore", "html_url": "https://rseng.github.io/software/repository/github/GoekeLab/xpore", "api_url": "https://rseng.github.io/software/api/repos/github/GoekeLab/xpore"}, {"uid": "github/justyncw/STAR_MELT", "html_url": "https://rseng.github.io/software/repository/github/justyncw/STAR_MELT", "api_url": "https://rseng.github.io/software/api/repos/github/justyncw/STAR_MELT"}, {"uid": "github/paulsengroup/StripePy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/StripePy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/StripePy"}, {"uid": "github/paulsengroup/hictkR", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkR", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkR"}, {"uid": "github/paulsengroup/hictk", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictk", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictk"}, {"uid": "github/paulsengroup/hictkpy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkpy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkpy"}, {"uid": "github/ramadatta/CPgeneProfiler", "html_url": "https://rseng.github.io/software/repository/github/ramadatta/CPgeneProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/ramadatta/CPgeneProfiler"}, {"uid": "github/gramos/imagetooth", "html_url": "https://rseng.github.io/software/repository/github/gramos/imagetooth", "api_url": "https://rseng.github.io/software/api/repos/github/gramos/imagetooth"}, {"uid": "github/jasonyangshadow/lpmx", "html_url": "https://rseng.github.io/software/repository/github/jasonyangshadow/lpmx", "api_url": "https://rseng.github.io/software/api/repos/github/jasonyangshadow/lpmx"}, {"uid": "github/ShaunFell/GRBoondi", "html_url": "https://rseng.github.io/software/repository/github/ShaunFell/GRBoondi", "api_url": "https://rseng.github.io/software/api/repos/github/ShaunFell/GRBoondi"}, {"uid": "github/pyamg/pyamg", "html_url": "https://rseng.github.io/software/repository/github/pyamg/pyamg", "api_url": "https://rseng.github.io/software/api/repos/github/pyamg/pyamg"}, {"uid": "github/Magritte-code/pomme", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/pomme", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/pomme"}, {"uid": "github/Magritte-code/Magritte", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/Magritte", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/Magritte"}, {"uid": "github/mwanakijiji/rrlfe", "html_url": "https://rseng.github.io/software/repository/github/mwanakijiji/rrlfe", "api_url": "https://rseng.github.io/software/api/repos/github/mwanakijiji/rrlfe"}, {"uid": "github/linneas/condetri", "html_url": "https://rseng.github.io/software/repository/github/linneas/condetri", "api_url": "https://rseng.github.io/software/api/repos/github/linneas/condetri"}, {"uid": "github/seawander/centerRadon", "html_url": "https://rseng.github.io/software/repository/github/seawander/centerRadon", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/centerRadon"}, {"uid": "github/seawander/DebrisDiskFM", "html_url": "https://rseng.github.io/software/repository/github/seawander/DebrisDiskFM", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/DebrisDiskFM"}, {"uid": "github/PaulHancock/Aegean", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Aegean", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Aegean"}, {"uid": "github/PaulHancock/Robbie", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Robbie", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Robbie"}, {"uid": "github/B-UMMI/chewBBACA", "html_url": "https://rseng.github.io/software/repository/github/B-UMMI/chewBBACA", "api_url": "https://rseng.github.io/software/api/repos/github/B-UMMI/chewBBACA"}, {"uid": "github/astro-datalab/noaosourcecatalog", "html_url": "https://rseng.github.io/software/repository/github/astro-datalab/noaosourcecatalog", "api_url": "https://rseng.github.io/software/api/repos/github/astro-datalab/noaosourcecatalog"}, {"uid": "github/exoclam/gaspery", "html_url": "https://rseng.github.io/software/repository/github/exoclam/gaspery", "api_url": "https://rseng.github.io/software/api/repos/github/exoclam/gaspery"}, {"uid": "github/andymummeryastro/tidalspin", "html_url": "https://rseng.github.io/software/repository/github/andymummeryastro/tidalspin", "api_url": "https://rseng.github.io/software/api/repos/github/andymummeryastro/tidalspin"}, {"uid": "github/Onogi/VIGoR", "html_url": "https://rseng.github.io/software/repository/github/Onogi/VIGoR", "api_url": "https://rseng.github.io/software/api/repos/github/Onogi/VIGoR"}, {"uid": "github/equipeGST/RiboDoc", "html_url": "https://rseng.github.io/software/repository/github/equipeGST/RiboDoc", "api_url": "https://rseng.github.io/software/api/repos/github/equipeGST/RiboDoc"}, {"uid": "github/pencil-code/pencil-code", "html_url": "https://rseng.github.io/software/repository/github/pencil-code/pencil-code", "api_url": "https://rseng.github.io/software/api/repos/github/pencil-code/pencil-code"}, {"uid": "github/mateidavid/fast5", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/fast5", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/fast5"}, {"uid": "github/mateidavid/nanocall", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/nanocall", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/nanocall"}, {"uid": "github/jakobherpich/pyICs", "html_url": "https://rseng.github.io/software/repository/github/jakobherpich/pyICs", "api_url": "https://rseng.github.io/software/api/repos/github/jakobherpich/pyICs"}, {"uid": "github/NeoGeographyToolkit/StereoPipeline", "html_url": "https://rseng.github.io/software/repository/github/NeoGeographyToolkit/StereoPipeline", "api_url": "https://rseng.github.io/software/api/repos/github/NeoGeographyToolkit/StereoPipeline"}, {"uid": "github/macrocosme/amber_meta", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/amber_meta", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/amber_meta"}, {"uid": "github/macrocosme/time_domain_astronomy_sandbox", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/time_domain_astronomy_sandbox", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/time_domain_astronomy_sandbox"}, {"uid": "github/yhoogstrate/fastafs", "html_url": "https://rseng.github.io/software/repository/github/yhoogstrate/fastafs", "api_url": "https://rseng.github.io/software/api/repos/github/yhoogstrate/fastafs"}, {"uid": "github/NuSpaceSim/nupyprop", "html_url": "https://rseng.github.io/software/repository/github/NuSpaceSim/nupyprop", "api_url": "https://rseng.github.io/software/api/repos/github/NuSpaceSim/nupyprop"}, {"uid": "github/sihanjiao/j-comb", "html_url": "https://rseng.github.io/software/repository/github/sihanjiao/j-comb", "api_url": "https://rseng.github.io/software/api/repos/github/sihanjiao/j-comb"}, {"uid": "github/T-CAIREM/physionet-build", "html_url": "https://rseng.github.io/software/repository/github/T-CAIREM/physionet-build", "api_url": "https://rseng.github.io/software/api/repos/github/T-CAIREM/physionet-build"}, {"uid": "github/tdaylan/pcat", "html_url": "https://rseng.github.io/software/repository/github/tdaylan/pcat", "api_url": "https://rseng.github.io/software/api/repos/github/tdaylan/pcat"}, {"uid": "github/ISISNeutronMuon/quickBayes", "html_url": "https://rseng.github.io/software/repository/github/ISISNeutronMuon/quickBayes", "api_url": "https://rseng.github.io/software/api/repos/github/ISISNeutronMuon/quickBayes"}, {"uid": "github/takafumi291/ESSENCE", "html_url": "https://rseng.github.io/software/repository/github/takafumi291/ESSENCE", "api_url": "https://rseng.github.io/software/api/repos/github/takafumi291/ESSENCE"}, {"uid": "github/thejackal360/OpenPelt-Public", "html_url": "https://rseng.github.io/software/repository/github/thejackal360/OpenPelt-Public", "api_url": "https://rseng.github.io/software/api/repos/github/thejackal360/OpenPelt-Public"}, {"uid": "github/conda/pycosat", "html_url": "https://rseng.github.io/software/repository/github/conda/pycosat", "api_url": "https://rseng.github.io/software/api/repos/github/conda/pycosat"}, {"uid": "github/conda/conda", "html_url": "https://rseng.github.io/software/repository/github/conda/conda", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda"}, {"uid": "github/conda/conda-package-handling", "html_url": "https://rseng.github.io/software/repository/github/conda/conda-package-handling", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda-package-handling"}, {"uid": "github/AntonelliLab/seqcap_processor", "html_url": "https://rseng.github.io/software/repository/github/AntonelliLab/seqcap_processor", "api_url": "https://rseng.github.io/software/api/repos/github/AntonelliLab/seqcap_processor"}, {"uid": "github/michauhl/RBPBench", "html_url": "https://rseng.github.io/software/repository/github/michauhl/RBPBench", "api_url": "https://rseng.github.io/software/api/repos/github/michauhl/RBPBench"}, {"uid": "github/xfengnefx/hifiasm-meta", "html_url": "https://rseng.github.io/software/repository/github/xfengnefx/hifiasm-meta", "api_url": "https://rseng.github.io/software/api/repos/github/xfengnefx/hifiasm-meta"}, {"uid": "github/genialis/RNAnorm", "html_url": "https://rseng.github.io/software/repository/github/genialis/RNAnorm", "api_url": "https://rseng.github.io/software/api/repos/github/genialis/RNAnorm"}, {"uid": "github/hknd23/idcempy", "html_url": "https://rseng.github.io/software/repository/github/hknd23/idcempy", "api_url": "https://rseng.github.io/software/api/repos/github/hknd23/idcempy"}, {"uid": "github/farhanferoz/MultiNest", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/MultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/MultiNest"}, {"uid": "github/farhanferoz/BAMBI", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/BAMBI", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/BAMBI"}, {"uid": "github/farhanferoz/SkyNet", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/SkyNet", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/SkyNet"}, {"uid": "github/AFD-Illinois/ebhlight", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/ebhlight", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/ebhlight"}, {"uid": "github/AFD-Illinois/iharm3d", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/iharm3d", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/iharm3d"}, {"uid": "github/landoskape/syd", "html_url": "https://rseng.github.io/software/repository/github/landoskape/syd", "api_url": "https://rseng.github.io/software/api/repos/github/landoskape/syd"}, {"uid": "github/peterjc/galaxy_blast", "html_url": "https://rseng.github.io/software/repository/github/peterjc/galaxy_blast", "api_url": "https://rseng.github.io/software/api/repos/github/peterjc/galaxy_blast"}, {"uid": "github/rfeldmann/leopy", "html_url": "https://rseng.github.io/software/repository/github/rfeldmann/leopy", "api_url": "https://rseng.github.io/software/api/repos/github/rfeldmann/leopy"}, {"uid": "github/mfem/mfem", "html_url": "https://rseng.github.io/software/repository/github/mfem/mfem", "api_url": "https://rseng.github.io/software/api/repos/github/mfem/mfem"}, {"uid": "github/yuansliu/minirmd", "html_url": "https://rseng.github.io/software/repository/github/yuansliu/minirmd", "api_url": "https://rseng.github.io/software/api/repos/github/yuansliu/minirmd"}, {"uid": "github/HinodeXRT/xrtpy", "html_url": "https://rseng.github.io/software/repository/github/HinodeXRT/xrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/HinodeXRT/xrtpy"}, {"uid": "github/fripon/freeture", "html_url": "https://rseng.github.io/software/repository/github/fripon/freeture", "api_url": "https://rseng.github.io/software/api/repos/github/fripon/freeture"}, {"uid": "github/erikbern/ann-benchmarks", "html_url": "https://rseng.github.io/software/repository/github/erikbern/ann-benchmarks", "api_url": "https://rseng.github.io/software/api/repos/github/erikbern/ann-benchmarks"}, {"uid": "github/mlpack/mlpack", "html_url": "https://rseng.github.io/software/repository/github/mlpack/mlpack", "api_url": "https://rseng.github.io/software/api/repos/github/mlpack/mlpack"}, {"uid": "github/peterspackman/occ", "html_url": "https://rseng.github.io/software/repository/github/peterspackman/occ", "api_url": "https://rseng.github.io/software/api/repos/github/peterspackman/occ"}, {"uid": "github/marziarivi/RadioLensfit2", "html_url": "https://rseng.github.io/software/repository/github/marziarivi/RadioLensfit2", "api_url": "https://rseng.github.io/software/api/repos/github/marziarivi/RadioLensfit2"}, {"uid": "github/C-Briddon/SELCIE", "html_url": "https://rseng.github.io/software/repository/github/C-Briddon/SELCIE", "api_url": "https://rseng.github.io/software/api/repos/github/C-Briddon/SELCIE"}, {"uid": "github/afd-illinois/grim", "html_url": "https://rseng.github.io/software/repository/github/afd-illinois/grim", "api_url": "https://rseng.github.io/software/api/repos/github/afd-illinois/grim"}, {"uid": "github/ec363/parsleyapp", "html_url": "https://rseng.github.io/software/repository/github/ec363/parsleyapp", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/parsleyapp"}, {"uid": "github/ec363/fpcountr", "html_url": "https://rseng.github.io/software/repository/github/ec363/fpcountr", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/fpcountr"}, {"uid": "github/YaoGroup/DIFFICE_jax", "html_url": "https://rseng.github.io/software/repository/github/YaoGroup/DIFFICE_jax", "api_url": "https://rseng.github.io/software/api/repos/github/YaoGroup/DIFFICE_jax"}, {"uid": "github/MDamiano/ExoTR", "html_url": "https://rseng.github.io/software/repository/github/MDamiano/ExoTR", "api_url": "https://rseng.github.io/software/api/repos/github/MDamiano/ExoTR"}, {"uid": "github/venkateshgopinath/FAlCon-DNS", "html_url": "https://rseng.github.io/software/repository/github/venkateshgopinath/FAlCon-DNS", "api_url": "https://rseng.github.io/software/api/repos/github/venkateshgopinath/FAlCon-DNS"}, {"uid": "github/GOMC-WSU/GOMC", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/GOMC", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/GOMC"}, {"uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/MoSDeF-dihedral-fit"}, {"uid": "github/cosimoNigro/agnpy", "html_url": "https://rseng.github.io/software/repository/github/cosimoNigro/agnpy", "api_url": "https://rseng.github.io/software/api/repos/github/cosimoNigro/agnpy"}, {"uid": "github/csinva/imodels", "html_url": "https://rseng.github.io/software/repository/github/csinva/imodels", "api_url": "https://rseng.github.io/software/api/repos/github/csinva/imodels"}, {"uid": "github/mariuzka/pop2net", "html_url": "https://rseng.github.io/software/repository/github/mariuzka/pop2net", "api_url": "https://rseng.github.io/software/api/repos/github/mariuzka/pop2net"}, {"uid": "github/zenitani/OpenMHD", "html_url": "https://rseng.github.io/software/repository/github/zenitani/OpenMHD", "api_url": "https://rseng.github.io/software/api/repos/github/zenitani/OpenMHD"}, {"uid": "github/srigas/jaxkan", "html_url": "https://rseng.github.io/software/repository/github/srigas/jaxkan", "api_url": "https://rseng.github.io/software/api/repos/github/srigas/jaxkan"}, {"uid": "github/Jayshil/pycdata", "html_url": "https://rseng.github.io/software/repository/github/Jayshil/pycdata", "api_url": "https://rseng.github.io/software/api/repos/github/Jayshil/pycdata"}, {"uid": "github/davidogara/hetGPy", "html_url": "https://rseng.github.io/software/repository/github/davidogara/hetGPy", "api_url": "https://rseng.github.io/software/api/repos/github/davidogara/hetGPy"}, {"uid": "github/sys-bio/ratesb_python", "html_url": "https://rseng.github.io/software/repository/github/sys-bio/ratesb_python", "api_url": "https://rseng.github.io/software/api/repos/github/sys-bio/ratesb_python"}, {"uid": "github/Computational-NeuroGenetics/deMeta-beta", "html_url": "https://rseng.github.io/software/repository/github/Computational-NeuroGenetics/deMeta-beta", "api_url": "https://rseng.github.io/software/api/repos/github/Computational-NeuroGenetics/deMeta-beta"}, {"uid": "github/davidpamos/MultiModes", "html_url": "https://rseng.github.io/software/repository/github/davidpamos/MultiModes", "api_url": "https://rseng.github.io/software/api/repos/github/davidpamos/MultiModes"}, {"uid": "github/JuliaHealth/NeuroAnalyzer.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHealth/NeuroAnalyzer.jl"}, {"uid": "github/SeamusClarke/FragMent", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/FragMent", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/FragMent"}, {"uid": "github/SeamusClarke/BTS", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/BTS", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/BTS"}, {"uid": "github/cancerit/alleleCount", "html_url": "https://rseng.github.io/software/repository/github/cancerit/alleleCount", "api_url": "https://rseng.github.io/software/api/repos/github/cancerit/alleleCount"}, {"uid": "github/saeyslab/CytoNorm_Figures", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/CytoNorm_Figures", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/CytoNorm_Figures"}, {"uid": "github/saeyslab/PeacoQC", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/PeacoQC", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/PeacoQC"}, {"uid": "github/saeyslab/nichenetr", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/nichenetr", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/nichenetr"}, {"uid": "github/materialsproject/pymatgen-analysis-defects", "html_url": "https://rseng.github.io/software/repository/github/materialsproject/pymatgen-analysis-defects", "api_url": "https://rseng.github.io/software/api/repos/github/materialsproject/pymatgen-analysis-defects"}, {"uid": "github/IPESE/REHO", "html_url": "https://rseng.github.io/software/repository/github/IPESE/REHO", "api_url": "https://rseng.github.io/software/api/repos/github/IPESE/REHO"}, {"uid": "github/COBRAPROsimulator/COBRAPRO", "html_url": "https://rseng.github.io/software/repository/github/COBRAPROsimulator/COBRAPRO", "api_url": "https://rseng.github.io/software/api/repos/github/COBRAPROsimulator/COBRAPRO"}, {"uid": "github/NCIP/visda", "html_url": "https://rseng.github.io/software/repository/github/NCIP/visda", "api_url": "https://rseng.github.io/software/api/repos/github/NCIP/visda"}, {"uid": "github/florianfranz/topo_chronia", "html_url": "https://rseng.github.io/software/repository/github/florianfranz/topo_chronia", "api_url": "https://rseng.github.io/software/api/repos/github/florianfranz/topo_chronia"}, {"uid": "github/leapigufpb/FuzzyClass", "html_url": "https://rseng.github.io/software/repository/github/leapigufpb/FuzzyClass", "api_url": "https://rseng.github.io/software/api/repos/github/leapigufpb/FuzzyClass"}, {"uid": "github/fzi-forschungszentrum-informatik/TSInterpret", "html_url": "https://rseng.github.io/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", "api_url": "https://rseng.github.io/software/api/repos/github/fzi-forschungszentrum-informatik/TSInterpret"}, {"uid": "github/baiwenjia/ukbb_cardiac", "html_url": "https://rseng.github.io/software/repository/github/baiwenjia/ukbb_cardiac", "api_url": "https://rseng.github.io/software/api/repos/github/baiwenjia/ukbb_cardiac"}, {"uid": "github/daniloceano/CycloPhaser", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/CycloPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/CycloPhaser"}, {"uid": "github/daniloceano/LorenzCycleToolkit", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/LorenzCycleToolkit", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/LorenzCycleToolkit"}, {"uid": "github/mjshao06/pdifFinder", "html_url": "https://rseng.github.io/software/repository/github/mjshao06/pdifFinder", "api_url": "https://rseng.github.io/software/api/repos/github/mjshao06/pdifFinder"}, {"uid": "github/COINtoolbox/DRACULA", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/DRACULA", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/DRACULA"}, {"uid": "github/COINtoolbox/ActSNClass", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/ActSNClass", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/ActSNClass"}, {"uid": "github/COINtoolbox/CosmoPhotoz", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/CosmoPhotoz", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/CosmoPhotoz"}, {"uid": "github/ICESat2-SlideRule/paper", "html_url": "https://rseng.github.io/software/repository/github/ICESat2-SlideRule/paper", "api_url": "https://rseng.github.io/software/api/repos/github/ICESat2-SlideRule/paper"}, {"uid": "github/agsreejith/CONTROL", "html_url": "https://rseng.github.io/software/repository/github/agsreejith/CONTROL", "api_url": "https://rseng.github.io/software/api/repos/github/agsreejith/CONTROL"}, {"uid": "github/cds-astro/mocpy", "html_url": "https://rseng.github.io/software/repository/github/cds-astro/mocpy", "api_url": "https://rseng.github.io/software/api/repos/github/cds-astro/mocpy"}, {"uid": "github/mmelwani/AccretR", "html_url": "https://rseng.github.io/software/repository/github/mmelwani/AccretR", "api_url": "https://rseng.github.io/software/api/repos/github/mmelwani/AccretR"}, {"uid": "github/Muszeb/ENQUIRE", "html_url": "https://rseng.github.io/software/repository/github/Muszeb/ENQUIRE", "api_url": "https://rseng.github.io/software/api/repos/github/Muszeb/ENQUIRE"}, {"uid": "github/YonghuiDong/RawHummus", "html_url": "https://rseng.github.io/software/repository/github/YonghuiDong/RawHummus", "api_url": "https://rseng.github.io/software/api/repos/github/YonghuiDong/RawHummus"}, {"uid": "github/creaneroDIAS/beamModelTester", "html_url": "https://rseng.github.io/software/repository/github/creaneroDIAS/beamModelTester", "api_url": "https://rseng.github.io/software/api/repos/github/creaneroDIAS/beamModelTester"}, {"uid": "github/deweylab/RSEM", "html_url": "https://rseng.github.io/software/repository/github/deweylab/RSEM", "api_url": "https://rseng.github.io/software/api/repos/github/deweylab/RSEM"}, {"uid": "github/ashleychontos/pySYD", "html_url": "https://rseng.github.io/software/repository/github/ashleychontos/pySYD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleychontos/pySYD"}, {"uid": "github/dokkum/maskfill", "html_url": "https://rseng.github.io/software/repository/github/dokkum/maskfill", "api_url": "https://rseng.github.io/software/api/repos/github/dokkum/maskfill"}, {"uid": "github/GijsMulders/epos", "html_url": "https://rseng.github.io/software/repository/github/GijsMulders/epos", "api_url": "https://rseng.github.io/software/api/repos/github/GijsMulders/epos"}, {"uid": "github/reizio/reiz.io", "html_url": "https://rseng.github.io/software/repository/github/reizio/reiz.io", "api_url": "https://rseng.github.io/software/api/repos/github/reizio/reiz.io"}, {"uid": "github/i4Ds/Karabo-Pipeline", "html_url": "https://rseng.github.io/software/repository/github/i4Ds/Karabo-Pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/i4Ds/Karabo-Pipeline"}, {"uid": "github/SAMI-Galaxy-Survey/sami", "html_url": "https://rseng.github.io/software/repository/github/SAMI-Galaxy-Survey/sami", "api_url": "https://rseng.github.io/software/api/repos/github/SAMI-Galaxy-Survey/sami"}, {"uid": "github/nekokoe/Plasmer", "html_url": "https://rseng.github.io/software/repository/github/nekokoe/Plasmer", "api_url": "https://rseng.github.io/software/api/repos/github/nekokoe/Plasmer"}, {"uid": "github/sciris/sciris", "html_url": "https://rseng.github.io/software/repository/github/sciris/sciris", "api_url": "https://rseng.github.io/software/api/repos/github/sciris/sciris"}, {"uid": "github/tberlok/paicos", "html_url": "https://rseng.github.io/software/repository/github/tberlok/paicos", "api_url": "https://rseng.github.io/software/api/repos/github/tberlok/paicos"}, {"uid": "github/phil-mansfield/shellfish", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/shellfish", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/shellfish"}, {"uid": "github/phil-mansfield/gotetra", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/gotetra", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/gotetra"}, {"uid": "github/slcs-jsc/mptrac", "html_url": "https://rseng.github.io/software/repository/github/slcs-jsc/mptrac", "api_url": "https://rseng.github.io/software/api/repos/github/slcs-jsc/mptrac"}, {"uid": "github/MJTemple/qsogen", "html_url": "https://rseng.github.io/software/repository/github/MJTemple/qsogen", "api_url": "https://rseng.github.io/software/api/repos/github/MJTemple/qsogen"}, {"uid": "github/BlueBrain/BlueCelluLab", "html_url": "https://rseng.github.io/software/repository/github/BlueBrain/BlueCelluLab", "api_url": "https://rseng.github.io/software/api/repos/github/BlueBrain/BlueCelluLab"}, {"uid": "github/sauddy/GRINN", "html_url": "https://rseng.github.io/software/repository/github/sauddy/GRINN", "api_url": "https://rseng.github.io/software/api/repos/github/sauddy/GRINN"}, {"uid": "github/alercebroker/ATAT", "html_url": "https://rseng.github.io/software/repository/github/alercebroker/ATAT", "api_url": "https://rseng.github.io/software/api/repos/github/alercebroker/ATAT"}, {"uid": "github/dominic-chang/Krang.jl", "html_url": "https://rseng.github.io/software/repository/github/dominic-chang/Krang.jl", "api_url": "https://rseng.github.io/software/api/repos/github/dominic-chang/Krang.jl"}, {"uid": "github/tumcms/Open-Infra-Platform", "html_url": "https://rseng.github.io/software/repository/github/tumcms/Open-Infra-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/tumcms/Open-Infra-Platform"}, {"uid": "github/rega-cev/virulign", "html_url": "https://rseng.github.io/software/repository/github/rega-cev/virulign", "api_url": "https://rseng.github.io/software/api/repos/github/rega-cev/virulign"}, {"uid": "github/pacificbiosciences/bam2fastx", "html_url": "https://rseng.github.io/software/repository/github/pacificbiosciences/bam2fastx", "api_url": "https://rseng.github.io/software/api/repos/github/pacificbiosciences/bam2fastx"}, {"uid": "github/kendomaniac/rCASC", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/rCASC", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/rCASC"}, {"uid": "github/kendomaniac/docker4seq", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/docker4seq", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/docker4seq"}, {"uid": "github/jruffio/breads", "html_url": "https://rseng.github.io/software/repository/github/jruffio/breads", "api_url": "https://rseng.github.io/software/api/repos/github/jruffio/breads"}, {"uid": "github/TianlaiProject/tlpipe", "html_url": "https://rseng.github.io/software/repository/github/TianlaiProject/tlpipe", "api_url": "https://rseng.github.io/software/api/repos/github/TianlaiProject/tlpipe"}, {"uid": "github/WilliamLwj/PyXAB", "html_url": "https://rseng.github.io/software/repository/github/WilliamLwj/PyXAB", "api_url": "https://rseng.github.io/software/api/repos/github/WilliamLwj/PyXAB"}, {"uid": "github/cmateu/galstreams", "html_url": "https://rseng.github.io/software/repository/github/cmateu/galstreams", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/galstreams"}, {"uid": "github/cmateu/PyMGC3", "html_url": "https://rseng.github.io/software/repository/github/cmateu/PyMGC3", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/PyMGC3"}, {"uid": "github/ch-var/SMART", "html_url": "https://rseng.github.io/software/repository/github/ch-var/SMART", "api_url": "https://rseng.github.io/software/api/repos/github/ch-var/SMART"}, {"uid": "github/Ciela-Institute/caustics", "html_url": "https://rseng.github.io/software/repository/github/Ciela-Institute/caustics", "api_url": "https://rseng.github.io/software/api/repos/github/Ciela-Institute/caustics"}, {"uid": "github/peterk87/sistr_cmd", "html_url": "https://rseng.github.io/software/repository/github/peterk87/sistr_cmd", "api_url": "https://rseng.github.io/software/api/repos/github/peterk87/sistr_cmd"}, {"uid": "github/amiralih/MembraneAnalysis.jl", "html_url": "https://rseng.github.io/software/repository/github/amiralih/MembraneAnalysis.jl", "api_url": "https://rseng.github.io/software/api/repos/github/amiralih/MembraneAnalysis.jl"}, {"uid": "github/LLNL/popclass", "html_url": "https://rseng.github.io/software/repository/github/LLNL/popclass", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/popclass"}, {"uid": "github/LLNL/echemfem", "html_url": "https://rseng.github.io/software/repository/github/LLNL/echemfem", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/echemfem"}, {"uid": "github/LLNL/SSAPy", "html_url": "https://rseng.github.io/software/repository/github/LLNL/SSAPy", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/SSAPy"}, {"uid": "github/hippylib/soupy", "html_url": "https://rseng.github.io/software/repository/github/hippylib/soupy", "api_url": "https://rseng.github.io/software/api/repos/github/hippylib/soupy"}, {"uid": "github/bretthandrews/flexCE", "html_url": "https://rseng.github.io/software/repository/github/bretthandrews/flexCE", "api_url": "https://rseng.github.io/software/api/repos/github/bretthandrews/flexCE"}, {"uid": "github/qmarcou/IGoR", "html_url": "https://rseng.github.io/software/repository/github/qmarcou/IGoR", "api_url": "https://rseng.github.io/software/api/repos/github/qmarcou/IGoR"}, {"uid": "github/MetaboComp/TriplotGUI", "html_url": "https://rseng.github.io/software/repository/github/MetaboComp/TriplotGUI", "api_url": "https://rseng.github.io/software/api/repos/github/MetaboComp/TriplotGUI"}, {"uid": "github/birnstiel/two-pop-py", "html_url": "https://rseng.github.io/software/repository/github/birnstiel/two-pop-py", "api_url": "https://rseng.github.io/software/api/repos/github/birnstiel/two-pop-py"}, {"uid": "github/PRIS-CV/DS-UI", "html_url": "https://rseng.github.io/software/repository/github/PRIS-CV/DS-UI", "api_url": "https://rseng.github.io/software/api/repos/github/PRIS-CV/DS-UI"}, {"uid": "github/SJaffa/Jplots", "html_url": "https://rseng.github.io/software/repository/github/SJaffa/Jplots", "api_url": "https://rseng.github.io/software/api/repos/github/SJaffa/Jplots"}, {"uid": "github/lpfworld/DMPNet", "html_url": "https://rseng.github.io/software/repository/github/lpfworld/DMPNet", "api_url": "https://rseng.github.io/software/api/repos/github/lpfworld/DMPNet"}, {"uid": "github/umbralcalc/foxi", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/foxi", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/foxi"}, {"uid": "github/umbralcalc/nfield", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/nfield", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/nfield"}, {"uid": "github/umbralcalc/helmpy", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/helmpy", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/helmpy"}, {"uid": "github/giswqs/geemap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/geemap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/geemap"}, {"uid": "github/giswqs/leafmap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/leafmap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/leafmap"}, {"uid": "github/giswqs/lidar", "html_url": "https://rseng.github.io/software/repository/github/giswqs/lidar", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/lidar"}, {"uid": "github/miche-levi/pncbc-eftofpng", "html_url": "https://rseng.github.io/software/repository/github/miche-levi/pncbc-eftofpng", "api_url": "https://rseng.github.io/software/api/repos/github/miche-levi/pncbc-eftofpng"}, {"uid": "github/pymc-devs/pymc3", "html_url": "https://rseng.github.io/software/repository/github/pymc-devs/pymc3", "api_url": "https://rseng.github.io/software/api/repos/github/pymc-devs/pymc3"}, {"uid": "github/rajmadan96/StochasticDominance.jl", "html_url": "https://rseng.github.io/software/repository/github/rajmadan96/StochasticDominance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rajmadan96/StochasticDominance.jl"}, {"uid": "github/AtrCheema/SeqMetrics", "html_url": "https://rseng.github.io/software/repository/github/AtrCheema/SeqMetrics", "api_url": "https://rseng.github.io/software/api/repos/github/AtrCheema/SeqMetrics"}, {"uid": "github/DochtermannLab/BehavioralHeritability", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/BehavioralHeritability", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/BehavioralHeritability"}, {"uid": "github/DochtermannLab/G-PopComparison", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/G-PopComparison", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/G-PopComparison"}, {"uid": "github/Parsoa/SVDSS", "html_url": "https://rseng.github.io/software/repository/github/Parsoa/SVDSS", "api_url": "https://rseng.github.io/software/api/repos/github/Parsoa/SVDSS"}, {"uid": "github/potassco/clingo", "html_url": "https://rseng.github.io/software/repository/github/potassco/clingo", "api_url": "https://rseng.github.io/software/api/repos/github/potassco/clingo"}, {"uid": "github/Jwindler/PlotHiC", "html_url": "https://rseng.github.io/software/repository/github/Jwindler/PlotHiC", "api_url": "https://rseng.github.io/software/api/repos/github/Jwindler/PlotHiC"}, {"uid": "github/poissonconsulting/bisonpicsuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bisonpicsuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bisonpicsuite"}, {"uid": "github/poissonconsulting/bbousuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bbousuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bbousuite"}, {"uid": "github/hongli-ma/RNANetMotif", "html_url": "https://rseng.github.io/software/repository/github/hongli-ma/RNANetMotif", "api_url": "https://rseng.github.io/software/api/repos/github/hongli-ma/RNANetMotif"}, {"uid": "github/bioinfo-ut/GenomeTester4", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/GenomeTester4", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/GenomeTester4"}, {"uid": "github/bioinfo-ut/PlasmidSeeker", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/PlasmidSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/PlasmidSeeker"}, {"uid": "github/geospace-code/h5fortran", "html_url": "https://rseng.github.io/software/repository/github/geospace-code/h5fortran", "api_url": "https://rseng.github.io/software/api/repos/github/geospace-code/h5fortran"}, {"uid": "github/quadram-institute-bioscience/dadaist2", "html_url": "https://rseng.github.io/software/repository/github/quadram-institute-bioscience/dadaist2", "api_url": "https://rseng.github.io/software/api/repos/github/quadram-institute-bioscience/dadaist2"}, {"uid": "github/EmmanuelSchaan/LaSSI", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LaSSI", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LaSSI"}, {"uid": "github/EmmanuelSchaan/ThumbStack", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/ThumbStack", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/ThumbStack"}, {"uid": "github/EmmanuelSchaan/HaloGen", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/HaloGen", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/HaloGen"}, {"uid": "github/EmmanuelSchaan/LensQuEst", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LensQuEst", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LensQuEst"}, {"uid": "github/eleniadam/npgreat", "html_url": "https://rseng.github.io/software/repository/github/eleniadam/npgreat", "api_url": "https://rseng.github.io/software/api/repos/github/eleniadam/npgreat"}, {"uid": "github/wmalab/EnHiC", "html_url": "https://rseng.github.io/software/repository/github/wmalab/EnHiC", "api_url": "https://rseng.github.io/software/api/repos/github/wmalab/EnHiC"}, {"uid": "github/sid-krish/Rhometa_Full_Genome", "html_url": "https://rseng.github.io/software/repository/github/sid-krish/Rhometa_Full_Genome", "api_url": "https://rseng.github.io/software/api/repos/github/sid-krish/Rhometa_Full_Genome"}, {"uid": "github/richteague/eddy", "html_url": "https://rseng.github.io/software/repository/github/richteague/eddy", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/eddy"}, {"uid": "github/richteague/disksurf", "html_url": "https://rseng.github.io/software/repository/github/richteague/disksurf", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/disksurf"}, {"uid": "github/richteague/gofish", "html_url": "https://rseng.github.io/software/repository/github/richteague/gofish", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/gofish"}, {"uid": "github/richteague/bettermoments", "html_url": "https://rseng.github.io/software/repository/github/richteague/bettermoments", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/bettermoments"}, {"uid": "github/connectomicslab/connectomemapper3", "html_url": "https://rseng.github.io/software/repository/github/connectomicslab/connectomemapper3", "api_url": "https://rseng.github.io/software/api/repos/github/connectomicslab/connectomemapper3"}, {"uid": "github/mattwarkentin/openmpp", "html_url": "https://rseng.github.io/software/repository/github/mattwarkentin/openmpp", "api_url": "https://rseng.github.io/software/api/repos/github/mattwarkentin/openmpp"}, {"uid": "github/matplotlib/matplotlib", "html_url": "https://rseng.github.io/software/repository/github/matplotlib/matplotlib", "api_url": "https://rseng.github.io/software/api/repos/github/matplotlib/matplotlib"}, {"uid": "github/ben-cassese/squishyplanet", "html_url": "https://rseng.github.io/software/repository/github/ben-cassese/squishyplanet", "api_url": "https://rseng.github.io/software/api/repos/github/ben-cassese/squishyplanet"}, {"uid": "github/FelixKrueger/TrimGalore", "html_url": "https://rseng.github.io/software/repository/github/FelixKrueger/TrimGalore", "api_url": "https://rseng.github.io/software/api/repos/github/FelixKrueger/TrimGalore"}, {"uid": "github/mad-lab-fau/tpcp", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/tpcp", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/tpcp"}, {"uid": "github/mad-lab-fau/imucal", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/imucal", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/imucal"}, {"uid": "github/sumn2u/annotate-lab", "html_url": "https://rseng.github.io/software/repository/github/sumn2u/annotate-lab", "api_url": "https://rseng.github.io/software/api/repos/github/sumn2u/annotate-lab"}, {"uid": "github/masadcv/FastGeodis", "html_url": "https://rseng.github.io/software/repository/github/masadcv/FastGeodis", "api_url": "https://rseng.github.io/software/api/repos/github/masadcv/FastGeodis"}, {"uid": "github/kevin-tofu/scikit-topt", "html_url": "https://rseng.github.io/software/repository/github/kevin-tofu/scikit-topt", "api_url": "https://rseng.github.io/software/api/repos/github/kevin-tofu/scikit-topt"}, {"uid": "github/exoclime/Helios-r2", "html_url": "https://rseng.github.io/software/repository/github/exoclime/Helios-r2", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/Helios-r2"}, {"uid": "github/exoclime/THOR", "html_url": "https://rseng.github.io/software/repository/github/exoclime/THOR", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/THOR"}, {"uid": "github/exoclime/HELA", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELA", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELA"}, {"uid": "github/exoclime/HELIOS-K", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS-K", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS-K"}, {"uid": "github/exoclime/VULCAN", "html_url": "https://rseng.github.io/software/repository/github/exoclime/VULCAN", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/VULCAN"}, {"uid": "github/exoclime/FastChem", "html_url": "https://rseng.github.io/software/repository/github/exoclime/FastChem", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/FastChem"}, {"uid": "github/exoclime/HELIOS", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS"}, {"uid": "github/cosmo-ethz/CosmoHammer", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/CosmoHammer", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/CosmoHammer"}, {"uid": "github/cosmo-ethz/seek", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/seek", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/seek"}, {"uid": "github/cosmo-ethz/hide", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/hide", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/hide"}, {"uid": "github/tanhevg/GpABC.jl", "html_url": "https://rseng.github.io/software/repository/github/tanhevg/GpABC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tanhevg/GpABC.jl"}, {"uid": "github/zgazak/TAP", "html_url": "https://rseng.github.io/software/repository/github/zgazak/TAP", "api_url": "https://rseng.github.io/software/api/repos/github/zgazak/TAP"}, {"uid": "github/theonefromnowhere/FitCov", "html_url": "https://rseng.github.io/software/repository/github/theonefromnowhere/FitCov", "api_url": "https://rseng.github.io/software/api/repos/github/theonefromnowhere/FitCov"}, {"uid": "github/seheonoh/baygaud", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/baygaud", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/baygaud"}, {"uid": "github/seheonoh/2dbat", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/2dbat", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/2dbat"}, {"uid": "github/FEniCS/basix", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/basix", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/basix"}, {"uid": "github/FEniCS/ffcx", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/ffcx", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/ffcx"}, {"uid": "github/open2c/pairtools", "html_url": "https://rseng.github.io/software/repository/github/open2c/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/pairtools"}, {"uid": "github/open2c/polychrom", "html_url": "https://rseng.github.io/software/repository/github/open2c/polychrom", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/polychrom"}, {"uid": "github/shergreen/SatGen", "html_url": "https://rseng.github.io/software/repository/github/shergreen/SatGen", "api_url": "https://rseng.github.io/software/api/repos/github/shergreen/SatGen"}, {"uid": "github/chervias/DustFilaments", "html_url": "https://rseng.github.io/software/repository/github/chervias/DustFilaments", "api_url": "https://rseng.github.io/software/api/repos/github/chervias/DustFilaments"}, {"uid": "github/homerjed/sbgm", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbgm", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbgm"}, {"uid": "github/homerjed/sbiax", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbiax", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbiax"}, {"uid": "github/thegenemyers/DALIGNER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DALIGNER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DALIGNER"}, {"uid": "github/thegenemyers/DAMAPPER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAMAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAMAPPER"}, {"uid": "github/thegenemyers/FASTK", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/FASTK", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/FASTK"}, {"uid": "github/thegenemyers/DAZZ_DB", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAZZ_DB", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAZZ_DB"}, {"uid": "github/thegenemyers/DEXTRACTOR", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DEXTRACTOR", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DEXTRACTOR"}, {"uid": "github/RussellJurek/busy-function-fitting", "html_url": "https://rseng.github.io/software/repository/github/RussellJurek/busy-function-fitting", "api_url": "https://rseng.github.io/software/api/repos/github/RussellJurek/busy-function-fitting"}, {"uid": "github/EACcodes/TigerCI", "html_url": "https://rseng.github.io/software/repository/github/EACcodes/TigerCI", "api_url": "https://rseng.github.io/software/api/repos/github/EACcodes/TigerCI"}, {"uid": "github/hoechenberger/questplus", "html_url": "https://rseng.github.io/software/repository/github/hoechenberger/questplus", "api_url": "https://rseng.github.io/software/api/repos/github/hoechenberger/questplus"}, {"uid": "github/refresh-bio/agc", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/agc", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/agc"}, {"uid": "github/refresh-bio/whisper", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/whisper", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/whisper"}, {"uid": "github/seqcode/allo", "html_url": "https://rseng.github.io/software/repository/github/seqcode/allo", "api_url": "https://rseng.github.io/software/api/repos/github/seqcode/allo"}, {"uid": "github/AngusWright/LAMBDAR", "html_url": "https://rseng.github.io/software/repository/github/AngusWright/LAMBDAR", "api_url": "https://rseng.github.io/software/api/repos/github/AngusWright/LAMBDAR"}, {"uid": "github/beckermr/calclens", "html_url": "https://rseng.github.io/software/repository/github/beckermr/calclens", "api_url": "https://rseng.github.io/software/api/repos/github/beckermr/calclens"}, {"uid": "github/bblodfon/emba", "html_url": "https://rseng.github.io/software/repository/github/bblodfon/emba", "api_url": "https://rseng.github.io/software/api/repos/github/bblodfon/emba"}, {"uid": "github/helenqu/scone", "html_url": "https://rseng.github.io/software/repository/github/helenqu/scone", "api_url": "https://rseng.github.io/software/api/repos/github/helenqu/scone"}, {"uid": "github/IBM/topography-searcher", "html_url": "https://rseng.github.io/software/repository/github/IBM/topography-searcher", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/topography-searcher"}, {"uid": "github/IBM/fold2seq", "html_url": "https://rseng.github.io/software/repository/github/IBM/fold2seq", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/fold2seq"}, {"uid": "github/GunzIvan28/rMAP", "html_url": "https://rseng.github.io/software/repository/github/GunzIvan28/rMAP", "api_url": "https://rseng.github.io/software/api/repos/github/GunzIvan28/rMAP"}, {"uid": "github/VNNikolaidis/nnlib2Rcpp", "html_url": "https://rseng.github.io/software/repository/github/VNNikolaidis/nnlib2Rcpp", "api_url": "https://rseng.github.io/software/api/repos/github/VNNikolaidis/nnlib2Rcpp"}, {"uid": "github/aritrachakrabarty/GPS", "html_url": "https://rseng.github.io/software/repository/github/aritrachakrabarty/GPS", "api_url": "https://rseng.github.io/software/api/repos/github/aritrachakrabarty/GPS"}, {"uid": "github/cadop/seg1d", "html_url": "https://rseng.github.io/software/repository/github/cadop/seg1d", "api_url": "https://rseng.github.io/software/api/repos/github/cadop/seg1d"}, {"uid": "github/napakalas/casbert", "html_url": "https://rseng.github.io/software/repository/github/napakalas/casbert", "api_url": "https://rseng.github.io/software/api/repos/github/napakalas/casbert"}, {"uid": "github/BapMel/mesocalc", "html_url": "https://rseng.github.io/software/repository/github/BapMel/mesocalc", "api_url": "https://rseng.github.io/software/api/repos/github/BapMel/mesocalc"}, {"uid": "github/splicebox/PsiCLASS", "html_url": "https://rseng.github.io/software/repository/github/splicebox/PsiCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/splicebox/PsiCLASS"}, {"uid": "github/vidarsko/ComFiT", "html_url": "https://rseng.github.io/software/repository/github/vidarsko/ComFiT", "api_url": "https://rseng.github.io/software/api/repos/github/vidarsko/ComFiT"}, {"uid": "github/trygvrad/DF-XRM_viz", "html_url": "https://rseng.github.io/software/repository/github/trygvrad/DF-XRM_viz", "api_url": "https://rseng.github.io/software/api/repos/github/trygvrad/DF-XRM_viz"}, {"uid": "github/deepmind/alphafold", "html_url": "https://rseng.github.io/software/repository/github/deepmind/alphafold", "api_url": "https://rseng.github.io/software/api/repos/github/deepmind/alphafold"}, {"uid": "github/mdtanker/polartoolkit", "html_url": "https://rseng.github.io/software/repository/github/mdtanker/polartoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/mdtanker/polartoolkit"}, {"uid": "github/casacore/casacore", "html_url": "https://rseng.github.io/software/repository/github/casacore/casacore", "api_url": "https://rseng.github.io/software/api/repos/github/casacore/casacore"}, {"uid": "github/Multiversario/satcand", "html_url": "https://rseng.github.io/software/repository/github/Multiversario/satcand", "api_url": "https://rseng.github.io/software/api/repos/github/Multiversario/satcand"}, {"uid": "github/JLiangLab/TransVW", "html_url": "https://rseng.github.io/software/repository/github/JLiangLab/TransVW", "api_url": "https://rseng.github.io/software/api/repos/github/JLiangLab/TransVW"}, {"uid": "github/arangrhie/merfin", "html_url": "https://rseng.github.io/software/repository/github/arangrhie/merfin", "api_url": "https://rseng.github.io/software/api/repos/github/arangrhie/merfin"}, {"uid": "github/R-Computing-Lab/ggpedigree", "html_url": "https://rseng.github.io/software/repository/github/R-Computing-Lab/ggpedigree", "api_url": "https://rseng.github.io/software/api/repos/github/R-Computing-Lab/ggpedigree"}, {"uid": "github/sntioudis/papreca", "html_url": "https://rseng.github.io/software/repository/github/sntioudis/papreca", "api_url": "https://rseng.github.io/software/api/repos/github/sntioudis/papreca"}, {"uid": "github/mbaes/SpheCow", "html_url": "https://rseng.github.io/software/repository/github/mbaes/SpheCow", "api_url": "https://rseng.github.io/software/api/repos/github/mbaes/SpheCow"}, {"uid": "github/pyvisa/pyvisa", "html_url": "https://rseng.github.io/software/repository/github/pyvisa/pyvisa", "api_url": "https://rseng.github.io/software/api/repos/github/pyvisa/pyvisa"}, {"uid": "github/djones1040/PythonPhot", "html_url": "https://rseng.github.io/software/repository/github/djones1040/PythonPhot", "api_url": "https://rseng.github.io/software/api/repos/github/djones1040/PythonPhot"}, {"uid": "github/pytorch/vision", "html_url": "https://rseng.github.io/software/repository/github/pytorch/vision", "api_url": "https://rseng.github.io/software/api/repos/github/pytorch/vision"}, {"uid": "github/esplint/IRACpm", "html_url": "https://rseng.github.io/software/repository/github/esplint/IRACpm", "api_url": "https://rseng.github.io/software/api/repos/github/esplint/IRACpm"}, {"uid": "github/cochran4/GEMB", "html_url": "https://rseng.github.io/software/repository/github/cochran4/GEMB", "api_url": "https://rseng.github.io/software/api/repos/github/cochran4/GEMB"}, {"uid": "github/viromelab/tracespipe", "html_url": "https://rseng.github.io/software/repository/github/viromelab/tracespipe", "api_url": "https://rseng.github.io/software/api/repos/github/viromelab/tracespipe"}, {"uid": "github/MDU-PHL/emmtyper", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/emmtyper", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/emmtyper"}, {"uid": "github/MDU-PHL/abritamr", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/abritamr", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/abritamr"}, {"uid": "github/MJCliffe/PASCal", "html_url": "https://rseng.github.io/software/repository/github/MJCliffe/PASCal", "api_url": "https://rseng.github.io/software/api/repos/github/MJCliffe/PASCal"}, {"uid": "github/metageni/FOCUS", "html_url": "https://rseng.github.io/software/repository/github/metageni/FOCUS", "api_url": "https://rseng.github.io/software/api/repos/github/metageni/FOCUS"}, {"uid": "github/ToyotaCRDL/mahos", "html_url": "https://rseng.github.io/software/repository/github/ToyotaCRDL/mahos", "api_url": "https://rseng.github.io/software/api/repos/github/ToyotaCRDL/mahos"}, {"uid": "github/ColmTalbot/gwpopulation", "html_url": "https://rseng.github.io/software/repository/github/ColmTalbot/gwpopulation", "api_url": "https://rseng.github.io/software/api/repos/github/ColmTalbot/gwpopulation"}, {"uid": "github/tatekawa-astron/3LPT-init", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/3LPT-init", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/3LPT-init"}, {"uid": "github/tatekawa-astron/PN", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/PN", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/PN"}, {"uid": "github/AmruteLab/PyChelator", "html_url": "https://rseng.github.io/software/repository/github/AmruteLab/PyChelator", "api_url": "https://rseng.github.io/software/api/repos/github/AmruteLab/PyChelator"}, {"uid": "github/xstarkit/mpi_xstar", "html_url": "https://rseng.github.io/software/repository/github/xstarkit/mpi_xstar", "api_url": "https://rseng.github.io/software/api/repos/github/xstarkit/mpi_xstar"}, {"uid": "github/bioinform/somaticseq", "html_url": "https://rseng.github.io/software/repository/github/bioinform/somaticseq", "api_url": "https://rseng.github.io/software/api/repos/github/bioinform/somaticseq"}, {"uid": "github/desResLab/LINFA", "html_url": "https://rseng.github.io/software/repository/github/desResLab/LINFA", "api_url": "https://rseng.github.io/software/api/repos/github/desResLab/LINFA"}, {"uid": "github/davidsoergel/rtax", "html_url": "https://rseng.github.io/software/repository/github/davidsoergel/rtax", "api_url": "https://rseng.github.io/software/api/repos/github/davidsoergel/rtax"}, {"uid": "github/fcastagna/preprofit", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/preprofit", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/preprofit"}, {"uid": "github/fcastagna/JoXSZ", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/JoXSZ", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/JoXSZ"}, {"uid": "github/benstahl92/deepSIP", "html_url": "https://rseng.github.io/software/repository/github/benstahl92/deepSIP", "api_url": "https://rseng.github.io/software/api/repos/github/benstahl92/deepSIP"}, {"uid": "github/TRI-AMDD/GMP-featurizer", "html_url": "https://rseng.github.io/software/repository/github/TRI-AMDD/GMP-featurizer", "api_url": "https://rseng.github.io/software/api/repos/github/TRI-AMDD/GMP-featurizer"}, {"uid": "github/koustavchandra/gwforge", "html_url": "https://rseng.github.io/software/repository/github/koustavchandra/gwforge", "api_url": "https://rseng.github.io/software/api/repos/github/koustavchandra/gwforge"}, {"uid": "github/RadioAstronomySoftwareGroup/pyradiosky", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyradiosky"}, {"uid": "github/RadioAstronomySoftwareGroup/pyuvdata", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyuvdata"}, {"uid": "github/Jingxuan97/nemesispy", "html_url": "https://rseng.github.io/software/repository/github/Jingxuan97/nemesispy", "api_url": "https://rseng.github.io/software/api/repos/github/Jingxuan97/nemesispy"}, {"uid": "github/kuenzelab/ENDURE", "html_url": "https://rseng.github.io/software/repository/github/kuenzelab/ENDURE", "api_url": "https://rseng.github.io/software/api/repos/github/kuenzelab/ENDURE"}, {"uid": "github/amueller/word_cloud", "html_url": "https://rseng.github.io/software/repository/github/amueller/word_cloud", "api_url": "https://rseng.github.io/software/api/repos/github/amueller/word_cloud"}, {"uid": "github/Caltech-IPAC/kete", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/kete", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/kete"}, {"uid": "github/Caltech-IPAC/Montage", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/Montage", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/Montage"}, {"uid": "github/engyasin/Offline_MOT", "html_url": "https://rseng.github.io/software/repository/github/engyasin/Offline_MOT", "api_url": "https://rseng.github.io/software/api/repos/github/engyasin/Offline_MOT"}, {"uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", "html_url": "https://rseng.github.io/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", "api_url": "https://rseng.github.io/software/api/repos/github/MehrnooshTahani/MappingBLOS_MolecularClouds"}, {"uid": "github/mlaparie/sigh", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/sigh", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/sigh"}, {"uid": "github/mlaparie/phidget-tools", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/phidget-tools", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/phidget-tools"}, {"uid": "github/eweitz/ideogram", "html_url": "https://rseng.github.io/software/repository/github/eweitz/ideogram", "api_url": "https://rseng.github.io/software/api/repos/github/eweitz/ideogram"}, {"uid": "github/rreischke/OneCovariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/OneCovariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/OneCovariance"}, {"uid": "github/rreischke/frb_covariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/frb_covariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/frb_covariance"}, {"uid": "github/AOtools/aotools", "html_url": "https://rseng.github.io/software/repository/github/AOtools/aotools", "api_url": "https://rseng.github.io/software/api/repos/github/AOtools/aotools"}, {"uid": "github/brsynth/rp2paths", "html_url": "https://rseng.github.io/software/repository/github/brsynth/rp2paths", "api_url": "https://rseng.github.io/software/api/repos/github/brsynth/rp2paths"}, {"uid": "github/llrs/experDesign", "html_url": "https://rseng.github.io/software/repository/github/llrs/experDesign", "api_url": "https://rseng.github.io/software/api/repos/github/llrs/experDesign"}, {"uid": "github/DaymudeLab/assembly-theory", "html_url": "https://rseng.github.io/software/repository/github/DaymudeLab/assembly-theory", "api_url": "https://rseng.github.io/software/api/repos/github/DaymudeLab/assembly-theory"}, {"uid": "github/henrikmelin/h3ppy", "html_url": "https://rseng.github.io/software/repository/github/henrikmelin/h3ppy", "api_url": "https://rseng.github.io/software/api/repos/github/henrikmelin/h3ppy"}, {"uid": "github/dewberryjanosz/polyrot", "html_url": "https://rseng.github.io/software/repository/github/dewberryjanosz/polyrot", "api_url": "https://rseng.github.io/software/api/repos/github/dewberryjanosz/polyrot"}, {"uid": "github/christopherlovell/sengi", "html_url": "https://rseng.github.io/software/repository/github/christopherlovell/sengi", "api_url": "https://rseng.github.io/software/api/repos/github/christopherlovell/sengi"}, {"uid": "github/nlppln/nlppln", "html_url": "https://rseng.github.io/software/repository/github/nlppln/nlppln", "api_url": "https://rseng.github.io/software/api/repos/github/nlppln/nlppln"}, {"uid": "github/TransDecoder/wiki", "html_url": "https://rseng.github.io/software/repository/github/TransDecoder/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/TransDecoder/wiki"}, {"uid": "github/muttenthalerlab/PeptideMiner", "html_url": "https://rseng.github.io/software/repository/github/muttenthalerlab/PeptideMiner", "api_url": "https://rseng.github.io/software/api/repos/github/muttenthalerlab/PeptideMiner"}, {"uid": "github/baxmittens/VTUFileHandler", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/VTUFileHandler", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/VTUFileHandler"}, {"uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl"}, {"uid": "github/toshiyan/cmblensplus", "html_url": "https://rseng.github.io/software/repository/github/toshiyan/cmblensplus", "api_url": "https://rseng.github.io/software/api/repos/github/toshiyan/cmblensplus"}, {"uid": "github/UNSW-CEEM/nempy", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/nempy", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/nempy"}, {"uid": "github/UNSW-CEEM/NEMSEER", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/NEMSEER", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/NEMSEER"}, {"uid": "github/maormizrachi/MadVoro", "html_url": "https://rseng.github.io/software/repository/github/maormizrachi/MadVoro", "api_url": "https://rseng.github.io/software/api/repos/github/maormizrachi/MadVoro"}, {"uid": "github/data4goodlab/wgand", "html_url": "https://rseng.github.io/software/repository/github/data4goodlab/wgand", "api_url": "https://rseng.github.io/software/api/repos/github/data4goodlab/wgand"}, {"uid": "github/NLeSC-GO-common-infrastructure/marzipan", "html_url": "https://rseng.github.io/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC-GO-common-infrastructure/marzipan"}, {"uid": "github/sambit-giri/BCMemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCMemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCMemu"}, {"uid": "github/sambit-giri/BCemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCemu"}, {"uid": "github/sambit-giri/tools21cm", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/tools21cm", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/tools21cm"}, {"uid": "github/0satoken/Eclairs", "html_url": "https://rseng.github.io/software/repository/github/0satoken/Eclairs", "api_url": "https://rseng.github.io/software/api/repos/github/0satoken/Eclairs"}, {"uid": "github/canimus/cuallee", "html_url": "https://rseng.github.io/software/repository/github/canimus/cuallee", "api_url": "https://rseng.github.io/software/api/repos/github/canimus/cuallee"}, {"uid": "github/ScialdoneLab/MitoHEAR", "html_url": "https://rseng.github.io/software/repository/github/ScialdoneLab/MitoHEAR", "api_url": "https://rseng.github.io/software/api/repos/github/ScialdoneLab/MitoHEAR"}, {"uid": "github/FreBio/komics", "html_url": "https://rseng.github.io/software/repository/github/FreBio/komics", "api_url": "https://rseng.github.io/software/api/repos/github/FreBio/komics"}, {"uid": "github/songweizhi/Binning_refiner", "html_url": "https://rseng.github.io/software/repository/github/songweizhi/Binning_refiner", "api_url": "https://rseng.github.io/software/api/repos/github/songweizhi/Binning_refiner"}, {"uid": "github/SirSharpest/NarrowEscapeSimulator", "html_url": "https://rseng.github.io/software/repository/github/SirSharpest/NarrowEscapeSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/SirSharpest/NarrowEscapeSimulator"}, {"uid": "github/exomishra/kobe", "html_url": "https://rseng.github.io/software/repository/github/exomishra/kobe", "api_url": "https://rseng.github.io/software/api/repos/github/exomishra/kobe"}, {"uid": "github/voutcn/megahit", "html_url": "https://rseng.github.io/software/repository/github/voutcn/megahit", "api_url": "https://rseng.github.io/software/api/repos/github/voutcn/megahit"}, {"uid": "github/PRIDE-Archive/pridepy", "html_url": "https://rseng.github.io/software/repository/github/PRIDE-Archive/pridepy", "api_url": "https://rseng.github.io/software/api/repos/github/PRIDE-Archive/pridepy"}, {"uid": "github/tramarobin/fctSPM", "html_url": "https://rseng.github.io/software/repository/github/tramarobin/fctSPM", "api_url": "https://rseng.github.io/software/api/repos/github/tramarobin/fctSPM"}, {"uid": "github/icesat2py/icepyx", "html_url": "https://rseng.github.io/software/repository/github/icesat2py/icepyx", "api_url": "https://rseng.github.io/software/api/repos/github/icesat2py/icepyx"}, {"uid": "github/jakelever/civicmine", "html_url": "https://rseng.github.io/software/repository/github/jakelever/civicmine", "api_url": "https://rseng.github.io/software/api/repos/github/jakelever/civicmine"}, {"uid": "github/tjlcbakx/redshift-search-graphs", "html_url": "https://rseng.github.io/software/repository/github/tjlcbakx/redshift-search-graphs", "api_url": "https://rseng.github.io/software/api/repos/github/tjlcbakx/redshift-search-graphs"}, {"uid": "github/pachterlab/kallisto", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kallisto"}, {"uid": "github/pachterlab/kb_python", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kb_python", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kb_python"}, {"uid": "github/Illumina/akt", "html_url": "https://rseng.github.io/software/repository/github/Illumina/akt", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/akt"}, {"uid": "github/Illumina/MarViN", "html_url": "https://rseng.github.io/software/repository/github/Illumina/MarViN", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/MarViN"}, {"uid": "github/Illumina/manta", "html_url": "https://rseng.github.io/software/repository/github/Illumina/manta", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/manta"}, {"uid": "github/Illumina/ExpansionHunterDenovo", "html_url": "https://rseng.github.io/software/repository/github/Illumina/ExpansionHunterDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/ExpansionHunterDenovo"}, {"uid": "github/Illumina/SpliceAI", "html_url": "https://rseng.github.io/software/repository/github/Illumina/SpliceAI", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/SpliceAI"}, {"uid": "github/Illumina/canvas", "html_url": "https://rseng.github.io/software/repository/github/Illumina/canvas", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/canvas"}, {"uid": "github/Illumina/strelka", "html_url": "https://rseng.github.io/software/repository/github/Illumina/strelka", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/strelka"}, {"uid": "github/chhylp123/hifiasm", "html_url": "https://rseng.github.io/software/repository/github/chhylp123/hifiasm", "api_url": "https://rseng.github.io/software/api/repos/github/chhylp123/hifiasm"}, {"uid": "github/lutteropp/NetRAX", "html_url": "https://rseng.github.io/software/repository/github/lutteropp/NetRAX", "api_url": "https://rseng.github.io/software/api/repos/github/lutteropp/NetRAX"}, {"uid": "github/wdecoster/chopper", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/chopper", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/chopper"}, {"uid": "github/wdecoster/nanolyse", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanolyse", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanolyse"}, {"uid": "github/wdecoster/nano-snakemake", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nano-snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nano-snakemake"}, {"uid": "github/wdecoster/nanomath", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanomath", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanomath"}, {"uid": "github/wdecoster/nanoQC", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoQC", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoQC"}, {"uid": "github/wdecoster/NanoComp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoComp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoComp"}, {"uid": "github/wdecoster/NanoPlot", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoPlot", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoPlot"}, {"uid": "github/wdecoster/nanofilt", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanofilt", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanofilt"}, {"uid": "github/wdecoster/nanopack", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanopack", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanopack"}, {"uid": "github/wdecoster/nanoget", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoget", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoget"}, {"uid": "github/wdecoster/nanostat", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanostat", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanostat"}, {"uid": "github/wdecoster/nanocomp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanocomp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanocomp"}, {"uid": "github/FePhyFoFum/phyx", "html_url": "https://rseng.github.io/software/repository/github/FePhyFoFum/phyx", "api_url": "https://rseng.github.io/software/api/repos/github/FePhyFoFum/phyx"}, {"uid": "github/Cloud-Drift/clouddrift", "html_url": "https://rseng.github.io/software/repository/github/Cloud-Drift/clouddrift", "api_url": "https://rseng.github.io/software/api/repos/github/Cloud-Drift/clouddrift"}, {"uid": "github/connor-lab/vapor", "html_url": "https://rseng.github.io/software/repository/github/connor-lab/vapor", "api_url": "https://rseng.github.io/software/api/repos/github/connor-lab/vapor"}, {"uid": "github/r3w0p/bobocep", "html_url": "https://rseng.github.io/software/repository/github/r3w0p/bobocep", "api_url": "https://rseng.github.io/software/api/repos/github/r3w0p/bobocep"}, {"uid": "github/ChristopheBerthod/Piecewise.jl", "html_url": "https://rseng.github.io/software/repository/github/ChristopheBerthod/Piecewise.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopheBerthod/Piecewise.jl"}, {"uid": "github/jamesaird/FAST", "html_url": "https://rseng.github.io/software/repository/github/jamesaird/FAST", "api_url": "https://rseng.github.io/software/api/repos/github/jamesaird/FAST"}, {"uid": "github/privong/pyMCspearman", "html_url": "https://rseng.github.io/software/repository/github/privong/pyMCspearman", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pyMCspearman"}, {"uid": "github/privong/pymccorrelation", "html_url": "https://rseng.github.io/software/repository/github/privong/pymccorrelation", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pymccorrelation"}, {"uid": "github/lynx-x-ray-observatory/soxs", "html_url": "https://rseng.github.io/software/repository/github/lynx-x-ray-observatory/soxs", "api_url": "https://rseng.github.io/software/api/repos/github/lynx-x-ray-observatory/soxs"}, {"uid": "github/lydialucchesi/Vizumap", "html_url": "https://rseng.github.io/software/repository/github/lydialucchesi/Vizumap", "api_url": "https://rseng.github.io/software/api/repos/github/lydialucchesi/Vizumap"}, {"uid": "github/fizban007/Aperture4", "html_url": "https://rseng.github.io/software/repository/github/fizban007/Aperture4", "api_url": "https://rseng.github.io/software/api/repos/github/fizban007/Aperture4"}, {"uid": "github/morriscb/The-wiZZ", "html_url": "https://rseng.github.io/software/repository/github/morriscb/The-wiZZ", "api_url": "https://rseng.github.io/software/api/repos/github/morriscb/The-wiZZ"}, {"uid": "github/husseinaluie/FlowSieve", "html_url": "https://rseng.github.io/software/repository/github/husseinaluie/FlowSieve", "api_url": "https://rseng.github.io/software/api/repos/github/husseinaluie/FlowSieve"}, {"uid": "github/stan-dev/stan", "html_url": "https://rseng.github.io/software/repository/github/stan-dev/stan", "api_url": "https://rseng.github.io/software/api/repos/github/stan-dev/stan"}, {"uid": "github/danielemelini/ALMA3", "html_url": "https://rseng.github.io/software/repository/github/danielemelini/ALMA3", "api_url": "https://rseng.github.io/software/api/repos/github/danielemelini/ALMA3"}, {"uid": "github/telatin/bamtocov", "html_url": "https://rseng.github.io/software/repository/github/telatin/bamtocov", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/bamtocov"}, {"uid": "github/telatin/covtobed", "html_url": "https://rseng.github.io/software/repository/github/telatin/covtobed", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/covtobed"}, {"uid": "github/telatin/qax", "html_url": "https://rseng.github.io/software/repository/github/telatin/qax", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/qax"}, {"uid": "github/telatin/seqfu2", "html_url": "https://rseng.github.io/software/repository/github/telatin/seqfu2", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/seqfu2"}, {"uid": "github/mrazomej/AutoEncoderToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/mrazomej/AutoEncoderToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mrazomej/AutoEncoderToolkit.jl"}, {"uid": "github/DotBots/qrkey", "html_url": "https://rseng.github.io/software/repository/github/DotBots/qrkey", "api_url": "https://rseng.github.io/software/api/repos/github/DotBots/qrkey"}, {"uid": "github/RafaelSdeSouza/capivara", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/capivara", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/capivara"}, {"uid": "github/RafaelSdeSouza/qrpca", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/qrpca", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/qrpca"}, {"uid": "github/AgentOxygen/HDP", "html_url": "https://rseng.github.io/software/repository/github/AgentOxygen/HDP", "api_url": "https://rseng.github.io/software/api/repos/github/AgentOxygen/HDP"}, {"uid": "github/Valcin/BE_HaPPy", "html_url": "https://rseng.github.io/software/repository/github/Valcin/BE_HaPPy", "api_url": "https://rseng.github.io/software/api/repos/github/Valcin/BE_HaPPy"}, {"uid": "github/YihePang/DisoFLAG", "html_url": "https://rseng.github.io/software/repository/github/YihePang/DisoFLAG", "api_url": "https://rseng.github.io/software/api/repos/github/YihePang/DisoFLAG"}, {"uid": "github/DS4Ag/dpest", "html_url": "https://rseng.github.io/software/repository/github/DS4Ag/dpest", "api_url": "https://rseng.github.io/software/api/repos/github/DS4Ag/dpest"}, {"uid": "github/smoh/kinesis", "html_url": "https://rseng.github.io/software/repository/github/smoh/kinesis", "api_url": "https://rseng.github.io/software/api/repos/github/smoh/kinesis"}, {"uid": "github/tribshms/tRIBS", "html_url": "https://rseng.github.io/software/repository/github/tribshms/tRIBS", "api_url": "https://rseng.github.io/software/api/repos/github/tribshms/tRIBS"}, {"uid": "github/cwru-pat/cmb-multipole_vectors", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cmb-multipole_vectors", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cmb-multipole_vectors"}, {"uid": "github/cwru-pat/cosmograph", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cosmograph", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cosmograph"}, {"uid": "github/bjmorgan/py-sc-fermi", "html_url": "https://rseng.github.io/software/repository/github/bjmorgan/py-sc-fermi", "api_url": "https://rseng.github.io/software/api/repos/github/bjmorgan/py-sc-fermi"}, {"uid": "github/pipliggins/EVolve", "html_url": "https://rseng.github.io/software/repository/github/pipliggins/EVolve", "api_url": "https://rseng.github.io/software/api/repos/github/pipliggins/EVolve"}, {"uid": "github/EcoJulia/EcologicalNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/EcologicalNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/EcologicalNetworks.jl"}, {"uid": "github/EcoJulia/SimpleSDMLayers.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/SimpleSDMLayers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/SimpleSDMLayers.jl"}, {"uid": "github/EcoJulia/Microbiome.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/Microbiome.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/Microbiome.jl"}, {"uid": "github/arshajii/ema", "html_url": "https://rseng.github.io/software/repository/github/arshajii/ema", "api_url": "https://rseng.github.io/software/api/repos/github/arshajii/ema"}, {"uid": "github/csbioinfopk/iSumoK-PseAAC", "html_url": "https://rseng.github.io/software/repository/github/csbioinfopk/iSumoK-PseAAC", "api_url": "https://rseng.github.io/software/api/repos/github/csbioinfopk/iSumoK-PseAAC"}, {"uid": "github/maayane/catsHTM", "html_url": "https://rseng.github.io/software/repository/github/maayane/catsHTM", "api_url": "https://rseng.github.io/software/api/repos/github/maayane/catsHTM"}, {"uid": "github/HAWinther/MG-PICOLA-PUBLIC", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/MG-PICOLA-PUBLIC"}, {"uid": "github/HAWinther/FML", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/FML", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/FML"}, {"uid": "github/jstuecker/adiabatic-tides", "html_url": "https://rseng.github.io/software/repository/github/jstuecker/adiabatic-tides", "api_url": "https://rseng.github.io/software/api/repos/github/jstuecker/adiabatic-tides"}, {"uid": "github/gt1/bambamc", "html_url": "https://rseng.github.io/software/repository/github/gt1/bambamc", "api_url": "https://rseng.github.io/software/api/repos/github/gt1/bambamc"}, {"uid": "github/sjvrijn/mf2", "html_url": "https://rseng.github.io/software/repository/github/sjvrijn/mf2", "api_url": "https://rseng.github.io/software/api/repos/github/sjvrijn/mf2"}, {"uid": "github/Qiskit-Extensions/qiskit-dynamics", "html_url": "https://rseng.github.io/software/repository/github/Qiskit-Extensions/qiskit-dynamics", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit-Extensions/qiskit-dynamics"}, {"uid": "github/SJ001/AI-Feynman", "html_url": "https://rseng.github.io/software/repository/github/SJ001/AI-Feynman", "api_url": "https://rseng.github.io/software/api/repos/github/SJ001/AI-Feynman"}, {"uid": "github/NIFTI-Imaging/nifti_clib", "html_url": "https://rseng.github.io/software/repository/github/NIFTI-Imaging/nifti_clib", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTI-Imaging/nifti_clib"}, {"uid": "github/valentingar/confluxpro", "html_url": "https://rseng.github.io/software/repository/github/valentingar/confluxpro", "api_url": "https://rseng.github.io/software/api/repos/github/valentingar/confluxpro"}, {"uid": "github/ants-project/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ants-project/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ants-project/ANTs"}, {"uid": "github/anuradhawick/LRBinner", "html_url": "https://rseng.github.io/software/repository/github/anuradhawick/LRBinner", "api_url": "https://rseng.github.io/software/api/repos/github/anuradhawick/LRBinner"}, {"uid": "github/iomega/zenodo-upload", "html_url": "https://rseng.github.io/software/repository/github/iomega/zenodo-upload", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/zenodo-upload"}, {"uid": "github/iomega/spec2vec_gnps_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec_gnps_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec_gnps_data_analysis"}, {"uid": "github/iomega/spec2vec", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec"}, {"uid": "github/iomega/paired-data-form", "html_url": "https://rseng.github.io/software/repository/github/iomega/paired-data-form", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/paired-data-form"}, {"uid": "github/minterpy-project/minterpy", "html_url": "https://rseng.github.io/software/repository/github/minterpy-project/minterpy", "api_url": "https://rseng.github.io/software/api/repos/github/minterpy-project/minterpy"}, {"uid": "github/thomasorb/orcs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orcs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orcs"}, {"uid": "github/thomasorb/orbs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orbs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orbs"}, {"uid": "github/BiocomputeLab/paraSBOLv", "html_url": "https://rseng.github.io/software/repository/github/BiocomputeLab/paraSBOLv", "api_url": "https://rseng.github.io/software/api/repos/github/BiocomputeLab/paraSBOLv"}, {"uid": "github/CSUBioGroup/GraphLncLoc", "html_url": "https://rseng.github.io/software/repository/github/CSUBioGroup/GraphLncLoc", "api_url": "https://rseng.github.io/software/api/repos/github/CSUBioGroup/GraphLncLoc"}, {"uid": "github/imcgreer/simqso", "html_url": "https://rseng.github.io/software/repository/github/imcgreer/simqso", "api_url": "https://rseng.github.io/software/api/repos/github/imcgreer/simqso"}, {"uid": "github/aiproteomics/aiproteomics", "html_url": "https://rseng.github.io/software/repository/github/aiproteomics/aiproteomics", "api_url": "https://rseng.github.io/software/api/repos/github/aiproteomics/aiproteomics"}, {"uid": "github/Stuermer/EchelleSimulator", "html_url": "https://rseng.github.io/software/repository/github/Stuermer/EchelleSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/Stuermer/EchelleSimulator"}, {"uid": "github/RaRe-Technologies/gensim", "html_url": "https://rseng.github.io/software/repository/github/RaRe-Technologies/gensim", "api_url": "https://rseng.github.io/software/api/repos/github/RaRe-Technologies/gensim"}, {"uid": "github/Natsiopoulos/ARDL", "html_url": "https://rseng.github.io/software/repository/github/Natsiopoulos/ARDL", "api_url": "https://rseng.github.io/software/api/repos/github/Natsiopoulos/ARDL"}, {"uid": "github/morphometry/papaya2", "html_url": "https://rseng.github.io/software/repository/github/morphometry/papaya2", "api_url": "https://rseng.github.io/software/api/repos/github/morphometry/papaya2"}, {"uid": "github/msalibian/RBF", "html_url": "https://rseng.github.io/software/repository/github/msalibian/RBF", "api_url": "https://rseng.github.io/software/api/repos/github/msalibian/RBF"}, {"uid": "github/RAMP-project/RAMP", "html_url": "https://rseng.github.io/software/repository/github/RAMP-project/RAMP", "api_url": "https://rseng.github.io/software/api/repos/github/RAMP-project/RAMP"}, {"uid": "github/jbussemaker/SBArchOpt", "html_url": "https://rseng.github.io/software/repository/github/jbussemaker/SBArchOpt", "api_url": "https://rseng.github.io/software/api/repos/github/jbussemaker/SBArchOpt"}, {"uid": "github/SarveshVGharat/Plages-Identification", "html_url": "https://rseng.github.io/software/repository/github/SarveshVGharat/Plages-Identification", "api_url": "https://rseng.github.io/software/api/repos/github/SarveshVGharat/Plages-Identification"}, {"uid": "github/twinl/website", "html_url": "https://rseng.github.io/software/repository/github/twinl/website", "api_url": "https://rseng.github.io/software/api/repos/github/twinl/website"}, {"uid": "github/amrex-astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Castro"}, {"uid": "github/amrex-astro/MAESTRO", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/MAESTRO", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/MAESTRO"}, {"uid": "github/amrex-astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Nyx"}, {"uid": "github/RichardMoot/GrailLight", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/GrailLight", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/GrailLight"}, {"uid": "github/RichardMoot/LinearOne", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/LinearOne", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/LinearOne"}, {"uid": "github/showteeth/GEfetch2R", "html_url": "https://rseng.github.io/software/repository/github/showteeth/GEfetch2R", "api_url": "https://rseng.github.io/software/api/repos/github/showteeth/GEfetch2R"}, {"uid": "github/cistrome/MIRA", "html_url": "https://rseng.github.io/software/repository/github/cistrome/MIRA", "api_url": "https://rseng.github.io/software/api/repos/github/cistrome/MIRA"}, {"uid": "github/exosports/MARGE", "html_url": "https://rseng.github.io/software/repository/github/exosports/MARGE", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/MARGE"}, {"uid": "github/exosports/transit", "html_url": "https://rseng.github.io/software/repository/github/exosports/transit", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/transit"}, {"uid": "github/exosports/BART", "html_url": "https://rseng.github.io/software/repository/github/exosports/BART", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/BART"}, {"uid": "github/exosports/homer", "html_url": "https://rseng.github.io/software/repository/github/exosports/homer", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/homer"}, {"uid": "github/NorwegianVeterinaryInstitute/ALPPACA", "html_url": "https://rseng.github.io/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", "api_url": "https://rseng.github.io/software/api/repos/github/NorwegianVeterinaryInstitute/ALPPACA"}, {"uid": "github/BoevaLab/FREEC", "html_url": "https://rseng.github.io/software/repository/github/BoevaLab/FREEC", "api_url": "https://rseng.github.io/software/api/repos/github/BoevaLab/FREEC"}, {"uid": "github/pepamengual/UEP", "html_url": "https://rseng.github.io/software/repository/github/pepamengual/UEP", "api_url": "https://rseng.github.io/software/api/repos/github/pepamengual/UEP"}, {"uid": "github/konkolyseismolab/seismolab", "html_url": "https://rseng.github.io/software/repository/github/konkolyseismolab/seismolab", "api_url": "https://rseng.github.io/software/api/repos/github/konkolyseismolab/seismolab"}, {"uid": "github/vwesselkamp/ernie-extension", "html_url": "https://rseng.github.io/software/repository/github/vwesselkamp/ernie-extension", "api_url": "https://rseng.github.io/software/api/repos/github/vwesselkamp/ernie-extension"}, {"uid": "github/drwaseemsheikh/audiometry", "html_url": "https://rseng.github.io/software/repository/github/drwaseemsheikh/audiometry", "api_url": "https://rseng.github.io/software/api/repos/github/drwaseemsheikh/audiometry"}, {"uid": "github/NASA-PDS/naif-pds4-bundler", "html_url": "https://rseng.github.io/software/repository/github/NASA-PDS/naif-pds4-bundler", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-PDS/naif-pds4-bundler"}, {"uid": "github/AnantharamanLab/vRhyme", "html_url": "https://rseng.github.io/software/repository/github/AnantharamanLab/vRhyme", "api_url": "https://rseng.github.io/software/api/repos/github/AnantharamanLab/vRhyme"}, {"uid": "github/QITI/pySLM2", "html_url": "https://rseng.github.io/software/repository/github/QITI/pySLM2", "api_url": "https://rseng.github.io/software/api/repos/github/QITI/pySLM2"}, {"uid": "github/pysal/spaghetti", "html_url": "https://rseng.github.io/software/repository/github/pysal/spaghetti", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spaghetti"}, {"uid": "github/pysal/pysal", "html_url": "https://rseng.github.io/software/repository/github/pysal/pysal", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/pysal"}, {"uid": "github/pysal/spopt", "html_url": "https://rseng.github.io/software/repository/github/pysal/spopt", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spopt"}, {"uid": "github/legacysurvey/legacypipe", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/legacypipe", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/legacypipe"}, {"uid": "github/legacysurvey/unwise_psf", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/unwise_psf", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/unwise_psf"}, {"uid": "github/natir/rustyread", "html_url": "https://rseng.github.io/software/repository/github/natir/rustyread", "api_url": "https://rseng.github.io/software/api/repos/github/natir/rustyread"}, {"uid": "github/natir/vcf2parquet", "html_url": "https://rseng.github.io/software/repository/github/natir/vcf2parquet", "api_url": "https://rseng.github.io/software/api/repos/github/natir/vcf2parquet"}, {"uid": "github/natir/yacrd", "html_url": "https://rseng.github.io/software/repository/github/natir/yacrd", "api_url": "https://rseng.github.io/software/api/repos/github/natir/yacrd"}, {"uid": "github/jfalconbarroso/BAYES-LOSVD", "html_url": "https://rseng.github.io/software/repository/github/jfalconbarroso/BAYES-LOSVD", "api_url": "https://rseng.github.io/software/api/repos/github/jfalconbarroso/BAYES-LOSVD"}, {"uid": "github/cbib/decontaminator", "html_url": "https://rseng.github.io/software/repository/github/cbib/decontaminator", "api_url": "https://rseng.github.io/software/api/repos/github/cbib/decontaminator"}, {"uid": "github/radiosunpy/RadioSunPy", "html_url": "https://rseng.github.io/software/repository/github/radiosunpy/RadioSunPy", "api_url": "https://rseng.github.io/software/api/repos/github/radiosunpy/RadioSunPy"}, {"uid": "github/ABSESpy/ABSESpy", "html_url": "https://rseng.github.io/software/repository/github/ABSESpy/ABSESpy", "api_url": "https://rseng.github.io/software/api/repos/github/ABSESpy/ABSESpy"}, {"uid": "github/bio-tools/biotoolsSum", "html_url": "https://rseng.github.io/software/repository/github/bio-tools/biotoolsSum", "api_url": "https://rseng.github.io/software/api/repos/github/bio-tools/biotoolsSum"}, {"uid": "github/ParBLiSS/FastANI", "html_url": "https://rseng.github.io/software/repository/github/ParBLiSS/FastANI", "api_url": "https://rseng.github.io/software/api/repos/github/ParBLiSS/FastANI"}, {"uid": "github/Theano/Theano", "html_url": "https://rseng.github.io/software/repository/github/Theano/Theano", "api_url": "https://rseng.github.io/software/api/repos/github/Theano/Theano"}, {"uid": "github/signaturescience/skater", "html_url": "https://rseng.github.io/software/repository/github/signaturescience/skater", "api_url": "https://rseng.github.io/software/api/repos/github/signaturescience/skater"}, {"uid": "github/fjprichard/PyAFBF", "html_url": "https://rseng.github.io/software/repository/github/fjprichard/PyAFBF", "api_url": "https://rseng.github.io/software/api/repos/github/fjprichard/PyAFBF"}, {"uid": "github/ALive-research/Slicer-Liver", "html_url": "https://rseng.github.io/software/repository/github/ALive-research/Slicer-Liver", "api_url": "https://rseng.github.io/software/api/repos/github/ALive-research/Slicer-Liver"}, {"uid": "github/JamesKirk11/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/JamesKirk11/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/JamesKirk11/Tiberius"}, {"uid": "github/leraman/Hopla", "html_url": "https://rseng.github.io/software/repository/github/leraman/Hopla", "api_url": "https://rseng.github.io/software/api/repos/github/leraman/Hopla"}, {"uid": "github/ColemanRHarris/mxnorm", "html_url": "https://rseng.github.io/software/repository/github/ColemanRHarris/mxnorm", "api_url": "https://rseng.github.io/software/api/repos/github/ColemanRHarris/mxnorm"}, {"uid": "github/mlares/hearsay", "html_url": "https://rseng.github.io/software/repository/github/mlares/hearsay", "api_url": "https://rseng.github.io/software/api/repos/github/mlares/hearsay"}, {"uid": "github/LindaNab/mecor", "html_url": "https://rseng.github.io/software/repository/github/LindaNab/mecor", "api_url": "https://rseng.github.io/software/api/repos/github/LindaNab/mecor"}, {"uid": "github/KarchinLab/open-cravat-readthedocs", "html_url": "https://rseng.github.io/software/repository/github/KarchinLab/open-cravat-readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/KarchinLab/open-cravat-readthedocs"}, {"uid": "github/subisarkar/JexoSim", "html_url": "https://rseng.github.io/software/repository/github/subisarkar/JexoSim", "api_url": "https://rseng.github.io/software/api/repos/github/subisarkar/JexoSim"}, {"uid": "github/genomehubs/goat-cli", "html_url": "https://rseng.github.io/software/repository/github/genomehubs/goat-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genomehubs/goat-cli"}, {"uid": "github/duffell/Duffell_Gap", "html_url": "https://rseng.github.io/software/repository/github/duffell/Duffell_Gap", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Duffell_Gap"}, {"uid": "github/duffell/RT1D", "html_url": "https://rseng.github.io/software/repository/github/duffell/RT1D", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/RT1D"}, {"uid": "github/duffell/Disco", "html_url": "https://rseng.github.io/software/repository/github/duffell/Disco", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Disco"}, {"uid": "github/decargroup/pykoop", "html_url": "https://rseng.github.io/software/repository/github/decargroup/pykoop", "api_url": "https://rseng.github.io/software/api/repos/github/decargroup/pykoop"}, {"uid": "github/nipy/heudiconv", "html_url": "https://rseng.github.io/software/repository/github/nipy/heudiconv", "api_url": "https://rseng.github.io/software/api/repos/github/nipy/heudiconv"}, {"uid": "github/shishirdholakia/eclipsoid", "html_url": "https://rseng.github.io/software/repository/github/shishirdholakia/eclipsoid", "api_url": "https://rseng.github.io/software/api/repos/github/shishirdholakia/eclipsoid"}, {"uid": "github/FRED-2/OptiType", "html_url": "https://rseng.github.io/software/repository/github/FRED-2/OptiType", "api_url": "https://rseng.github.io/software/api/repos/github/FRED-2/OptiType"}, {"uid": "github/CyclotronResearchCentre/bidsme", "html_url": "https://rseng.github.io/software/repository/github/CyclotronResearchCentre/bidsme", "api_url": "https://rseng.github.io/software/api/repos/github/CyclotronResearchCentre/bidsme"}, {"uid": "github/elixir-luxembourg/daisy", "html_url": "https://rseng.github.io/software/repository/github/elixir-luxembourg/daisy", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-luxembourg/daisy"}, {"uid": "github/FireflySpectra/firefly_release", "html_url": "https://rseng.github.io/software/repository/github/FireflySpectra/firefly_release", "api_url": "https://rseng.github.io/software/api/repos/github/FireflySpectra/firefly_release"}, {"uid": "github/SeaIce-Math/SubZero", "html_url": "https://rseng.github.io/software/repository/github/SeaIce-Math/SubZero", "api_url": "https://rseng.github.io/software/api/repos/github/SeaIce-Math/SubZero"}, {"uid": "github/quatrope/ProperImage", "html_url": "https://rseng.github.io/software/repository/github/quatrope/ProperImage", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/ProperImage"}, {"uid": "github/quatrope/feets", "html_url": "https://rseng.github.io/software/repository/github/quatrope/feets", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/feets"}, {"uid": "github/msolpera/pyUPMASK", "html_url": "https://rseng.github.io/software/repository/github/msolpera/pyUPMASK", "api_url": "https://rseng.github.io/software/api/repos/github/msolpera/pyUPMASK"}, {"uid": "github/CRPropa/CRPropa2", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa2", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa2"}, {"uid": "github/CRPropa/CRPropa3", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa3", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa3"}, {"uid": "github/FraunhoferIWES/foxes", "html_url": "https://rseng.github.io/software/repository/github/FraunhoferIWES/foxes", "api_url": "https://rseng.github.io/software/api/repos/github/FraunhoferIWES/foxes"}, {"uid": "github/berczik/phi-GPU-mole", "html_url": "https://rseng.github.io/software/repository/github/berczik/phi-GPU-mole", "api_url": "https://rseng.github.io/software/api/repos/github/berczik/phi-GPU-mole"}, {"uid": "github/VU-BEAM-Lab/GENRE", "html_url": "https://rseng.github.io/software/repository/github/VU-BEAM-Lab/GENRE", "api_url": "https://rseng.github.io/software/api/repos/github/VU-BEAM-Lab/GENRE"}, {"uid": "github/light-curve/light-curve", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve"}, {"uid": "github/light-curve/light-curve-python", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve-python", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve-python"}, {"uid": "github/OSSOS/SurveySimulator", "html_url": "https://rseng.github.io/software/repository/github/OSSOS/SurveySimulator", "api_url": "https://rseng.github.io/software/api/repos/github/OSSOS/SurveySimulator"}, {"uid": "github/jbattat/pep_core", "html_url": "https://rseng.github.io/software/repository/github/jbattat/pep_core", "api_url": "https://rseng.github.io/software/api/repos/github/jbattat/pep_core"}, {"uid": "github/rizkg/BBHash", "html_url": "https://rseng.github.io/software/repository/github/rizkg/BBHash", "api_url": "https://rseng.github.io/software/api/repos/github/rizkg/BBHash"}, {"uid": "github/single-cell-genetics/cellsnp-lite", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/cellsnp-lite", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/cellsnp-lite"}, {"uid": "github/single-cell-genetics/vireo", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/vireo", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/vireo"}, {"uid": "github/zarr-developers/zarr-python", "html_url": "https://rseng.github.io/software/repository/github/zarr-developers/zarr-python", "api_url": "https://rseng.github.io/software/api/repos/github/zarr-developers/zarr-python"}, {"uid": "github/ryanvarley/exodata", "html_url": "https://rseng.github.io/software/repository/github/ryanvarley/exodata", "api_url": "https://rseng.github.io/software/api/repos/github/ryanvarley/exodata"}, {"uid": "github/hera-team/librarian", "html_url": "https://rseng.github.io/software/repository/github/hera-team/librarian", "api_url": "https://rseng.github.io/software/api/repos/github/hera-team/librarian"}, {"uid": "github/dalya/WeirdestGalaxies", "html_url": "https://rseng.github.io/software/repository/github/dalya/WeirdestGalaxies", "api_url": "https://rseng.github.io/software/api/repos/github/dalya/WeirdestGalaxies"}, {"uid": "github/SimonPfeifer/cows", "html_url": "https://rseng.github.io/software/repository/github/SimonPfeifer/cows", "api_url": "https://rseng.github.io/software/api/repos/github/SimonPfeifer/cows"}, {"uid": "github/OBrink/RanDepict", "html_url": "https://rseng.github.io/software/repository/github/OBrink/RanDepict", "api_url": "https://rseng.github.io/software/api/repos/github/OBrink/RanDepict"}, {"uid": "github/jodyphelan/TBProfiler", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/TBProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/TBProfiler"}, {"uid": "github/jodyphelan/tb-ml", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/tb-ml", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/tb-ml"}, {"uid": "github/mjuric/galfast", "html_url": "https://rseng.github.io/software/repository/github/mjuric/galfast", "api_url": "https://rseng.github.io/software/api/repos/github/mjuric/galfast"}, {"uid": "github/Multiscale-Genomics/VRE", "html_url": "https://rseng.github.io/software/repository/github/Multiscale-Genomics/VRE", "api_url": "https://rseng.github.io/software/api/repos/github/Multiscale-Genomics/VRE"}, {"uid": "github/WelbornGroup/ELECTRIC", "html_url": "https://rseng.github.io/software/repository/github/WelbornGroup/ELECTRIC", "api_url": "https://rseng.github.io/software/api/repos/github/WelbornGroup/ELECTRIC"}, {"uid": "github/mgieles/limepy", "html_url": "https://rseng.github.io/software/repository/github/mgieles/limepy", "api_url": "https://rseng.github.io/software/api/repos/github/mgieles/limepy"}, {"uid": "github/mlower/rmnest", "html_url": "https://rseng.github.io/software/repository/github/mlower/rmnest", "api_url": "https://rseng.github.io/software/api/repos/github/mlower/rmnest"}, {"uid": "github/florent-leclercq/pyselfi", "html_url": "https://rseng.github.io/software/repository/github/florent-leclercq/pyselfi", "api_url": "https://rseng.github.io/software/api/repos/github/florent-leclercq/pyselfi"}, {"uid": "github/recipy/recipy", "html_url": "https://rseng.github.io/software/repository/github/recipy/recipy", "api_url": "https://rseng.github.io/software/api/repos/github/recipy/recipy"}, {"uid": "github/xinglunju/pyAmor", "html_url": "https://rseng.github.io/software/repository/github/xinglunju/pyAmor", "api_url": "https://rseng.github.io/software/api/repos/github/xinglunju/pyAmor"}, {"uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "html_url": "https://rseng.github.io/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "api_url": "https://rseng.github.io/software/api/repos/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark"}, {"uid": "github/ronshnapp/MyPTV", "html_url": "https://rseng.github.io/software/repository/github/ronshnapp/MyPTV", "api_url": "https://rseng.github.io/software/api/repos/github/ronshnapp/MyPTV"}, {"uid": "github/CGATOxford/UMI-tools", "html_url": "https://rseng.github.io/software/repository/github/CGATOxford/UMI-tools", "api_url": "https://rseng.github.io/software/api/repos/github/CGATOxford/UMI-tools"}, {"uid": "github/RabadanLab/arcasHLA", "html_url": "https://rseng.github.io/software/repository/github/RabadanLab/arcasHLA", "api_url": "https://rseng.github.io/software/api/repos/github/RabadanLab/arcasHLA"}, {"uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "html_url": "https://rseng.github.io/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "api_url": "https://rseng.github.io/software/api/repos/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier"}, {"uid": "github/PopMedNet-Team/popmednet", "html_url": "https://rseng.github.io/software/repository/github/PopMedNet-Team/popmednet", "api_url": "https://rseng.github.io/software/api/repos/github/PopMedNet-Team/popmednet"}, {"uid": "github/fjankowsk/fitpdf", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/fitpdf", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/fitpdf"}, {"uid": "github/fjankowsk/scatfit", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/scatfit", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/scatfit"}, {"uid": "github/matteozennaro/reps", "html_url": "https://rseng.github.io/software/repository/github/matteozennaro/reps", "api_url": "https://rseng.github.io/software/api/repos/github/matteozennaro/reps"}, {"uid": "github/jharno/cubep3m", "html_url": "https://rseng.github.io/software/repository/github/jharno/cubep3m", "api_url": "https://rseng.github.io/software/api/repos/github/jharno/cubep3m"}, {"uid": "github/PCMSolver/pcmsolver", "html_url": "https://rseng.github.io/software/repository/github/PCMSolver/pcmsolver", "api_url": "https://rseng.github.io/software/api/repos/github/PCMSolver/pcmsolver"}, {"uid": "github/dgrin1/axionCAMB", "html_url": "https://rseng.github.io/software/repository/github/dgrin1/axionCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/dgrin1/axionCAMB"}, {"uid": "github/jrenaud90/TidalPy", "html_url": "https://rseng.github.io/software/repository/github/jrenaud90/TidalPy", "api_url": "https://rseng.github.io/software/api/repos/github/jrenaud90/TidalPy"}, {"uid": "github/liamedeiros/ehtplot", "html_url": "https://rseng.github.io/software/repository/github/liamedeiros/ehtplot", "api_url": "https://rseng.github.io/software/api/repos/github/liamedeiros/ehtplot"}, {"uid": "github/milicolazo/Pyedra", "html_url": "https://rseng.github.io/software/repository/github/milicolazo/Pyedra", "api_url": "https://rseng.github.io/software/api/repos/github/milicolazo/Pyedra"}, {"uid": "github/musevlt/origin", "html_url": "https://rseng.github.io/software/repository/github/musevlt/origin", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/origin"}, {"uid": "github/musevlt/muse-psfr", "html_url": "https://rseng.github.io/software/repository/github/musevlt/muse-psfr", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/muse-psfr"}, {"uid": "github/mikejohnson51/AHGestimation", "html_url": "https://rseng.github.io/software/repository/github/mikejohnson51/AHGestimation", "api_url": "https://rseng.github.io/software/api/repos/github/mikejohnson51/AHGestimation"}, {"uid": "github/zooniverse/starpy", "html_url": "https://rseng.github.io/software/repository/github/zooniverse/starpy", "api_url": "https://rseng.github.io/software/api/repos/github/zooniverse/starpy"}, {"uid": "github/jianhuupenn/SpaGCN", "html_url": "https://rseng.github.io/software/repository/github/jianhuupenn/SpaGCN", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuupenn/SpaGCN"}, {"uid": "github/mtlam/PyPulse", "html_url": "https://rseng.github.io/software/repository/github/mtlam/PyPulse", "api_url": "https://rseng.github.io/software/api/repos/github/mtlam/PyPulse"}, {"uid": "github/jan-orkisz/colume", "html_url": "https://rseng.github.io/software/repository/github/jan-orkisz/colume", "api_url": "https://rseng.github.io/software/api/repos/github/jan-orkisz/colume"}, {"uid": "github/odlomax/spamcart-dev", "html_url": "https://rseng.github.io/software/repository/github/odlomax/spamcart-dev", "api_url": "https://rseng.github.io/software/api/repos/github/odlomax/spamcart-dev"}, {"uid": "github/IAMconsortium/pyam", "html_url": "https://rseng.github.io/software/repository/github/IAMconsortium/pyam", "api_url": "https://rseng.github.io/software/api/repos/github/IAMconsortium/pyam"}, {"uid": "github/danielenricocahall/elephas", "html_url": "https://rseng.github.io/software/repository/github/danielenricocahall/elephas", "api_url": "https://rseng.github.io/software/api/repos/github/danielenricocahall/elephas"}, {"uid": "github/GATB/bcalm", "html_url": "https://rseng.github.io/software/repository/github/GATB/bcalm", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/bcalm"}, {"uid": "github/GATB/gatb-core", "html_url": "https://rseng.github.io/software/repository/github/GATB/gatb-core", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/gatb-core"}, {"uid": "github/GATB/simka", "html_url": "https://rseng.github.io/software/repository/github/GATB/simka", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/simka"}, {"uid": "github/GATB/MindTheGap", "html_url": "https://rseng.github.io/software/repository/github/GATB/MindTheGap", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/MindTheGap"}, {"uid": "github/Robaina/Pynteny", "html_url": "https://rseng.github.io/software/repository/github/Robaina/Pynteny", "api_url": "https://rseng.github.io/software/api/repos/github/Robaina/Pynteny"}, {"uid": "github/connor-makowski/type_enforced", "html_url": "https://rseng.github.io/software/repository/github/connor-makowski/type_enforced", "api_url": "https://rseng.github.io/software/api/repos/github/connor-makowski/type_enforced"}, {"uid": "github/askap-craco/CELEBI", "html_url": "https://rseng.github.io/software/repository/github/askap-craco/CELEBI", "api_url": "https://rseng.github.io/software/api/repos/github/askap-craco/CELEBI"}, {"uid": "github/taxprofiler/taxpasta", "html_url": "https://rseng.github.io/software/repository/github/taxprofiler/taxpasta", "api_url": "https://rseng.github.io/software/api/repos/github/taxprofiler/taxpasta"}, {"uid": "github/ShubhadeepSadhukhan1993/fastSF", "html_url": "https://rseng.github.io/software/repository/github/ShubhadeepSadhukhan1993/fastSF", "api_url": "https://rseng.github.io/software/api/repos/github/ShubhadeepSadhukhan1993/fastSF"}, {"uid": "github/lazear/sage", "html_url": "https://rseng.github.io/software/repository/github/lazear/sage", "api_url": "https://rseng.github.io/software/api/repos/github/lazear/sage"}, {"uid": "github/matta-research-group/SwiftPol", "html_url": "https://rseng.github.io/software/repository/github/matta-research-group/SwiftPol", "api_url": "https://rseng.github.io/software/api/repos/github/matta-research-group/SwiftPol"}, {"uid": "github/tpapp/MCMCDiagnostics.jl", "html_url": "https://rseng.github.io/software/repository/github/tpapp/MCMCDiagnostics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tpapp/MCMCDiagnostics.jl"}, {"uid": "github/CosmoStat/score", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/score", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/score"}, {"uid": "github/CosmoStat/shapepipe", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/shapepipe", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/shapepipe"}, {"uid": "github/CosmoStat/Glimpse", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/Glimpse", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/Glimpse"}, {"uid": "github/CosmoStat/mccd", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/mccd", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/mccd"}, {"uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", "html_url": "https://rseng.github.io/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", "api_url": "https://rseng.github.io/software/api/repos/github/uaf-arctic-eco-modeling/dvm-dos-tem"}, {"uid": "github/DrDaveShaw/INCHEM-Py", "html_url": "https://rseng.github.io/software/repository/github/DrDaveShaw/INCHEM-Py", "api_url": "https://rseng.github.io/software/api/repos/github/DrDaveShaw/INCHEM-Py"}, {"uid": "github/stinefm/relsad", "html_url": "https://rseng.github.io/software/repository/github/stinefm/relsad", "api_url": "https://rseng.github.io/software/api/repos/github/stinefm/relsad"}, {"uid": "github/MIAnalyzer/MIA", "html_url": "https://rseng.github.io/software/repository/github/MIAnalyzer/MIA", "api_url": "https://rseng.github.io/software/api/repos/github/MIAnalyzer/MIA"}, {"uid": "github/IPIS-XieLei/CNTSeg", "html_url": "https://rseng.github.io/software/repository/github/IPIS-XieLei/CNTSeg", "api_url": "https://rseng.github.io/software/api/repos/github/IPIS-XieLei/CNTSeg"}, {"uid": "github/fenderglass/Flye", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Flye"}, {"uid": "github/fenderglass/Ragout", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Ragout", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Ragout"}, {"uid": "github/ModellingWebLab/chaste-codegen", "html_url": "https://rseng.github.io/software/repository/github/ModellingWebLab/chaste-codegen", "api_url": "https://rseng.github.io/software/api/repos/github/ModellingWebLab/chaste-codegen"}, {"uid": "github/editeodoro/Bbarolo", "html_url": "https://rseng.github.io/software/repository/github/editeodoro/Bbarolo", "api_url": "https://rseng.github.io/software/api/repos/github/editeodoro/Bbarolo"}, {"uid": "github/studla/RYUTO", "html_url": "https://rseng.github.io/software/repository/github/studla/RYUTO", "api_url": "https://rseng.github.io/software/api/repos/github/studla/RYUTO"}, {"uid": "github/ltlancas/walter", "html_url": "https://rseng.github.io/software/repository/github/ltlancas/walter", "api_url": "https://rseng.github.io/software/api/repos/github/ltlancas/walter"}, {"uid": "github/CosmoTool/ECLIPSE", "html_url": "https://rseng.github.io/software/repository/github/CosmoTool/ECLIPSE", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoTool/ECLIPSE"}, {"uid": "github/BrownDwarf/gollum", "html_url": "https://rseng.github.io/software/repository/github/BrownDwarf/gollum", "api_url": "https://rseng.github.io/software/api/repos/github/BrownDwarf/gollum"}, {"uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", "html_url": "https://rseng.github.io/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", "api_url": "https://rseng.github.io/software/api/repos/github/VIRAC-SPACE/Automatic_Correlation_information_system"}, {"uid": "github/baharmon/r.earthworks", "html_url": "https://rseng.github.io/software/repository/github/baharmon/r.earthworks", "api_url": "https://rseng.github.io/software/api/repos/github/baharmon/r.earthworks"}, {"uid": "github/nh13/DWGSIM", "html_url": "https://rseng.github.io/software/repository/github/nh13/DWGSIM", "api_url": "https://rseng.github.io/software/api/repos/github/nh13/DWGSIM"}, {"uid": "github/drgmk/vis-r", "html_url": "https://rseng.github.io/software/repository/github/drgmk/vis-r", "api_url": "https://rseng.github.io/software/api/repos/github/drgmk/vis-r"}, {"uid": "github/McPHAC/McPHAC", "html_url": "https://rseng.github.io/software/repository/github/McPHAC/McPHAC", "api_url": "https://rseng.github.io/software/api/repos/github/McPHAC/McPHAC"}, {"uid": "github/ckarako/RRATtrap", "html_url": "https://rseng.github.io/software/repository/github/ckarako/RRATtrap", "api_url": "https://rseng.github.io/software/api/repos/github/ckarako/RRATtrap"}, {"uid": "github/songningqiang/CosmoLED", "html_url": "https://rseng.github.io/software/repository/github/songningqiang/CosmoLED", "api_url": "https://rseng.github.io/software/api/repos/github/songningqiang/CosmoLED"}, {"uid": "github/furrer-lab/abn", "html_url": "https://rseng.github.io/software/repository/github/furrer-lab/abn", "api_url": "https://rseng.github.io/software/api/repos/github/furrer-lab/abn"}, {"uid": "github/diCenzo-GC/Tn-Core-webserver", "html_url": "https://rseng.github.io/software/repository/github/diCenzo-GC/Tn-Core-webserver", "api_url": "https://rseng.github.io/software/api/repos/github/diCenzo-GC/Tn-Core-webserver"}, {"uid": "github/ntcockroft/STarFish", "html_url": "https://rseng.github.io/software/repository/github/ntcockroft/STarFish", "api_url": "https://rseng.github.io/software/api/repos/github/ntcockroft/STarFish"}, {"uid": "github/CheerfulUser/starkiller", "html_url": "https://rseng.github.io/software/repository/github/CheerfulUser/starkiller", "api_url": "https://rseng.github.io/software/api/repos/github/CheerfulUser/starkiller"}, {"uid": "github/zachetienne/nrpytutorial", "html_url": "https://rseng.github.io/software/repository/github/zachetienne/nrpytutorial", "api_url": "https://rseng.github.io/software/api/repos/github/zachetienne/nrpytutorial"}, {"uid": "github/DynaSlum/satsense", "html_url": "https://rseng.github.io/software/repository/github/DynaSlum/satsense", "api_url": "https://rseng.github.io/software/api/repos/github/DynaSlum/satsense"}, {"uid": "github/dazhwu/pydynpd", "html_url": "https://rseng.github.io/software/repository/github/dazhwu/pydynpd", "api_url": "https://rseng.github.io/software/api/repos/github/dazhwu/pydynpd"}, {"uid": "github/mpip/pfft", "html_url": "https://rseng.github.io/software/repository/github/mpip/pfft", "api_url": "https://rseng.github.io/software/api/repos/github/mpip/pfft"}, {"uid": "github/mindearth/mobilkit", "html_url": "https://rseng.github.io/software/repository/github/mindearth/mobilkit", "api_url": "https://rseng.github.io/software/api/repos/github/mindearth/mobilkit"}, {"uid": "github/mncrowe/QGDipoles.jl", "html_url": "https://rseng.github.io/software/repository/github/mncrowe/QGDipoles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mncrowe/QGDipoles.jl"}, {"uid": "github/AndrewGibbs/PathFinder", "html_url": "https://rseng.github.io/software/repository/github/AndrewGibbs/PathFinder", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewGibbs/PathFinder"}, {"uid": "github/hartwigmedical/hmftools", "html_url": "https://rseng.github.io/software/repository/github/hartwigmedical/hmftools", "api_url": "https://rseng.github.io/software/api/repos/github/hartwigmedical/hmftools"}, {"uid": "github/RemoteSensingTools/vSmartMOM.jl", "html_url": "https://rseng.github.io/software/repository/github/RemoteSensingTools/vSmartMOM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RemoteSensingTools/vSmartMOM.jl"}, {"uid": "github/linsalrob/PhiSpy", "html_url": "https://rseng.github.io/software/repository/github/linsalrob/PhiSpy", "api_url": "https://rseng.github.io/software/api/repos/github/linsalrob/PhiSpy"}, {"uid": "github/qurit/rt-utils", "html_url": "https://rseng.github.io/software/repository/github/qurit/rt-utils", "api_url": "https://rseng.github.io/software/api/repos/github/qurit/rt-utils"}, {"uid": "github/a-slide/pycoQC", "html_url": "https://rseng.github.io/software/repository/github/a-slide/pycoQC", "api_url": "https://rseng.github.io/software/api/repos/github/a-slide/pycoQC"}, {"uid": "github/davidebolo1993/TRiCoLOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/TRiCoLOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/TRiCoLOR"}, {"uid": "github/davidebolo1993/VISOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/VISOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/VISOR"}, {"uid": "github/cosmo-sims/DISCO-DJ", "html_url": "https://rseng.github.io/software/repository/github/cosmo-sims/DISCO-DJ", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-sims/DISCO-DJ"}, {"uid": "github/slzarate/parliament2", "html_url": "https://rseng.github.io/software/repository/github/slzarate/parliament2", "api_url": "https://rseng.github.io/software/api/repos/github/slzarate/parliament2"}, {"uid": "github/UM-Bridge/umbridge", "html_url": "https://rseng.github.io/software/repository/github/UM-Bridge/umbridge", "api_url": "https://rseng.github.io/software/api/repos/github/UM-Bridge/umbridge"}, {"uid": "github/chemprop/chemprop_benchmark", "html_url": "https://rseng.github.io/software/repository/github/chemprop/chemprop_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/chemprop/chemprop_benchmark"}, {"uid": "github/bzrudski/vectorose", "html_url": "https://rseng.github.io/software/repository/github/bzrudski/vectorose", "api_url": "https://rseng.github.io/software/api/repos/github/bzrudski/vectorose"}, {"uid": "github/FRBs/FRB", "html_url": "https://rseng.github.io/software/repository/github/FRBs/FRB", "api_url": "https://rseng.github.io/software/api/repos/github/FRBs/FRB"}, {"uid": "github/Mec-iS/arrowspace-rs", "html_url": "https://rseng.github.io/software/repository/github/Mec-iS/arrowspace-rs", "api_url": "https://rseng.github.io/software/api/repos/github/Mec-iS/arrowspace-rs"}, {"uid": "github/shilpagarg/WHdenovo", "html_url": "https://rseng.github.io/software/repository/github/shilpagarg/WHdenovo", "api_url": "https://rseng.github.io/software/api/repos/github/shilpagarg/WHdenovo"}, {"uid": "github/spinicist/riesling", "html_url": "https://rseng.github.io/software/repository/github/spinicist/riesling", "api_url": "https://rseng.github.io/software/api/repos/github/spinicist/riesling"}, {"uid": "github/JetBrains-Research/spbla", "html_url": "https://rseng.github.io/software/repository/github/JetBrains-Research/spbla", "api_url": "https://rseng.github.io/software/api/repos/github/JetBrains-Research/spbla"}, {"uid": "github/elsoroka/Satisfiability.jl", "html_url": "https://rseng.github.io/software/repository/github/elsoroka/Satisfiability.jl", "api_url": "https://rseng.github.io/software/api/repos/github/elsoroka/Satisfiability.jl"}, {"uid": "github/akcochrane/TEfits", "html_url": "https://rseng.github.io/software/repository/github/akcochrane/TEfits", "api_url": "https://rseng.github.io/software/api/repos/github/akcochrane/TEfits"}, {"uid": "github/pscicluna/precision", "html_url": "https://rseng.github.io/software/repository/github/pscicluna/precision", "api_url": "https://rseng.github.io/software/api/repos/github/pscicluna/precision"}, {"uid": "github/CHES2023/PyMsOfa", "html_url": "https://rseng.github.io/software/repository/github/CHES2023/PyMsOfa", "api_url": "https://rseng.github.io/software/api/repos/github/CHES2023/PyMsOfa"}, {"uid": "github/AaronDavidSchneider/chemcomp", "html_url": "https://rseng.github.io/software/repository/github/AaronDavidSchneider/chemcomp", "api_url": "https://rseng.github.io/software/api/repos/github/AaronDavidSchneider/chemcomp"}, {"uid": "github/jrkerns/pylinac", "html_url": "https://rseng.github.io/software/repository/github/jrkerns/pylinac", "api_url": "https://rseng.github.io/software/api/repos/github/jrkerns/pylinac"}, {"uid": "github/KorfLab/SNAP", "html_url": "https://rseng.github.io/software/repository/github/KorfLab/SNAP", "api_url": "https://rseng.github.io/software/api/repos/github/KorfLab/SNAP"}, {"uid": "github/wcoulton/CompressedFisher", "html_url": "https://rseng.github.io/software/repository/github/wcoulton/CompressedFisher", "api_url": "https://rseng.github.io/software/api/repos/github/wcoulton/CompressedFisher"}, {"uid": "github/konfound-project/konfound", "html_url": "https://rseng.github.io/software/repository/github/konfound-project/konfound", "api_url": "https://rseng.github.io/software/api/repos/github/konfound-project/konfound"}, {"uid": "github/jiujiezz/tsnad", "html_url": "https://rseng.github.io/software/repository/github/jiujiezz/tsnad", "api_url": "https://rseng.github.io/software/api/repos/github/jiujiezz/tsnad"}, {"uid": "github/sgshulman/DGEM", "html_url": "https://rseng.github.io/software/repository/github/sgshulman/DGEM", "api_url": "https://rseng.github.io/software/api/repos/github/sgshulman/DGEM"}, {"uid": "github/hombit/freddi", "html_url": "https://rseng.github.io/software/repository/github/hombit/freddi", "api_url": "https://rseng.github.io/software/api/repos/github/hombit/freddi"}, {"uid": "github/eggplantbren/RJObject", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RJObject", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RJObject"}, {"uid": "github/eggplantbren/DNest3", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest3", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest3"}, {"uid": "github/eggplantbren/Exoplanet", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/Exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/Exoplanet"}, {"uid": "github/eggplantbren/RMHB", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RMHB", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RMHB"}, {"uid": "github/eggplantbren/DNest4", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest4", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest4"}, {"uid": "github/yanliang-astro/aestra", "html_url": "https://rseng.github.io/software/repository/github/yanliang-astro/aestra", "api_url": "https://rseng.github.io/software/api/repos/github/yanliang-astro/aestra"}, {"uid": "github/mathopt/DynamicOED.jl", "html_url": "https://rseng.github.io/software/repository/github/mathopt/DynamicOED.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mathopt/DynamicOED.jl"}, {"uid": "github/pezmaster31/bamtools", "html_url": "https://rseng.github.io/software/repository/github/pezmaster31/bamtools", "api_url": "https://rseng.github.io/software/api/repos/github/pezmaster31/bamtools"}, {"uid": "github/kutaslab/fitgrid", "html_url": "https://rseng.github.io/software/repository/github/kutaslab/fitgrid", "api_url": "https://rseng.github.io/software/api/repos/github/kutaslab/fitgrid"}, {"uid": "github/gear-genomics/dicey", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/dicey", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/dicey"}, {"uid": "github/gear-genomics/tracy", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/tracy", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/tracy"}, {"uid": "github/apaolillo/pythainer", "html_url": "https://rseng.github.io/software/repository/github/apaolillo/pythainer", "api_url": "https://rseng.github.io/software/api/repos/github/apaolillo/pythainer"}, {"uid": "github/gsuissa/hardCORE", "html_url": "https://rseng.github.io/software/repository/github/gsuissa/hardCORE", "api_url": "https://rseng.github.io/software/api/repos/github/gsuissa/hardCORE"}, {"uid": "github/DrJieZheng/meanoffset", "html_url": "https://rseng.github.io/software/repository/github/DrJieZheng/meanoffset", "api_url": "https://rseng.github.io/software/api/repos/github/DrJieZheng/meanoffset"}, {"uid": "github/LTLA/gesel.js", "html_url": "https://rseng.github.io/software/repository/github/LTLA/gesel.js", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/gesel.js"}, {"uid": "github/LTLA/basilisk", "html_url": "https://rseng.github.io/software/repository/github/LTLA/basilisk", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/basilisk"}, {"uid": "github/PyTorchLightning/metrics", "html_url": "https://rseng.github.io/software/repository/github/PyTorchLightning/metrics", "api_url": "https://rseng.github.io/software/api/repos/github/PyTorchLightning/metrics"}, {"uid": "github/SebastianBocquet/pygtc", "html_url": "https://rseng.github.io/software/repository/github/SebastianBocquet/pygtc", "api_url": "https://rseng.github.io/software/api/repos/github/SebastianBocquet/pygtc"}, {"uid": "github/marseille-proteomique/DIAgui", "html_url": "https://rseng.github.io/software/repository/github/marseille-proteomique/DIAgui", "api_url": "https://rseng.github.io/software/api/repos/github/marseille-proteomique/DIAgui"}, {"uid": "github/stamatak/AxPcoords.dist", "html_url": "https://rseng.github.io/software/repository/github/stamatak/AxPcoords.dist", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/AxPcoords.dist"}, {"uid": "github/stamatak/ExaML", "html_url": "https://rseng.github.io/software/repository/github/stamatak/ExaML", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/ExaML"}, {"uid": "github/HofstadterTools/HofstadterTools", "html_url": "https://rseng.github.io/software/repository/github/HofstadterTools/HofstadterTools", "api_url": "https://rseng.github.io/software/api/repos/github/HofstadterTools/HofstadterTools"}, {"uid": "github/PabloMSanAla/fabada", "html_url": "https://rseng.github.io/software/repository/github/PabloMSanAla/fabada", "api_url": "https://rseng.github.io/software/api/repos/github/PabloMSanAla/fabada"}, {"uid": "github/ejeschke/ginga", "html_url": "https://rseng.github.io/software/repository/github/ejeschke/ginga", "api_url": "https://rseng.github.io/software/api/repos/github/ejeschke/ginga"}, {"uid": "github/hishamhm/htop", "html_url": "https://rseng.github.io/software/repository/github/hishamhm/htop", "api_url": "https://rseng.github.io/software/api/repos/github/hishamhm/htop"}, {"uid": "github/UrbanRuralSystems/ur-scape", "html_url": "https://rseng.github.io/software/repository/github/UrbanRuralSystems/ur-scape", "api_url": "https://rseng.github.io/software/api/repos/github/UrbanRuralSystems/ur-scape"}, {"uid": "github/eabaron/synow", "html_url": "https://rseng.github.io/software/repository/github/eabaron/synow", "api_url": "https://rseng.github.io/software/api/repos/github/eabaron/synow"}, {"uid": "github/citiususc/veryfasttree", "html_url": "https://rseng.github.io/software/repository/github/citiususc/veryfasttree", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/veryfasttree"}, {"uid": "github/citiususc/BigSeqKit", "html_url": "https://rseng.github.io/software/repository/github/citiususc/BigSeqKit", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/BigSeqKit"}, {"uid": "github/BradhamLab/icat", "html_url": "https://rseng.github.io/software/repository/github/BradhamLab/icat", "api_url": "https://rseng.github.io/software/api/repos/github/BradhamLab/icat"}, {"uid": "github/ggmichael/craterstats", "html_url": "https://rseng.github.io/software/repository/github/ggmichael/craterstats", "api_url": "https://rseng.github.io/software/api/repos/github/ggmichael/craterstats"}, {"uid": "github/migp11/pyfastcore", "html_url": "https://rseng.github.io/software/repository/github/migp11/pyfastcore", "api_url": "https://rseng.github.io/software/api/repos/github/migp11/pyfastcore"}, {"uid": "github/HLasse/TextDescriptives", "html_url": "https://rseng.github.io/software/repository/github/HLasse/TextDescriptives", "api_url": "https://rseng.github.io/software/api/repos/github/HLasse/TextDescriptives"}, {"uid": "github/zblz/naima", "html_url": "https://rseng.github.io/software/repository/github/zblz/naima", "api_url": "https://rseng.github.io/software/api/repos/github/zblz/naima"}, {"uid": "github/cogent3/cogent3", "html_url": "https://rseng.github.io/software/repository/github/cogent3/cogent3", "api_url": "https://rseng.github.io/software/api/repos/github/cogent3/cogent3"}, {"uid": "github/esoPanda/FTbg", "html_url": "https://rseng.github.io/software/repository/github/esoPanda/FTbg", "api_url": "https://rseng.github.io/software/api/repos/github/esoPanda/FTbg"}, {"uid": "github/ethz-randomwalk/polytopewalk", "html_url": "https://rseng.github.io/software/repository/github/ethz-randomwalk/polytopewalk", "api_url": "https://rseng.github.io/software/api/repos/github/ethz-randomwalk/polytopewalk"}, {"uid": "github/Julian/jsonschema", "html_url": "https://rseng.github.io/software/repository/github/Julian/jsonschema", "api_url": "https://rseng.github.io/software/api/repos/github/Julian/jsonschema"}, {"uid": "github/jbytecode/LinRegOutliers", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/LinRegOutliers", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/LinRegOutliers"}, {"uid": "github/jbytecode/JMcDM", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/JMcDM", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/JMcDM"}, {"uid": "github/jbytecode/OperationsResearchModels.jl", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/OperationsResearchModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/OperationsResearchModels.jl"}, {"uid": "github/chemfiles/chemfiles", "html_url": "https://rseng.github.io/software/repository/github/chemfiles/chemfiles", "api_url": "https://rseng.github.io/software/api/repos/github/chemfiles/chemfiles"}, {"uid": "github/SatelliteShorelines/CoastSeg", "html_url": "https://rseng.github.io/software/repository/github/SatelliteShorelines/CoastSeg", "api_url": "https://rseng.github.io/software/api/repos/github/SatelliteShorelines/CoastSeg"}, {"uid": "github/votca/xtp", "html_url": "https://rseng.github.io/software/repository/github/votca/xtp", "api_url": "https://rseng.github.io/software/api/repos/github/votca/xtp"}, {"uid": "github/phipsonlab/propeller-paper-analysis", "html_url": "https://rseng.github.io/software/repository/github/phipsonlab/propeller-paper-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phipsonlab/propeller-paper-analysis"}, {"uid": "github/brentp/somalier", "html_url": "https://rseng.github.io/software/repository/github/brentp/somalier", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/somalier"}, {"uid": "github/brentp/goleft", "html_url": "https://rseng.github.io/software/repository/github/brentp/goleft", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/goleft"}, {"uid": "github/brentp/kexpr-nim", "html_url": "https://rseng.github.io/software/repository/github/brentp/kexpr-nim", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/kexpr-nim"}, {"uid": "github/brentp/cigar", "html_url": "https://rseng.github.io/software/repository/github/brentp/cigar", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cigar"}, {"uid": "github/brentp/gsort", "html_url": "https://rseng.github.io/software/repository/github/brentp/gsort", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/gsort"}, {"uid": "github/brentp/hts-nim-tools", "html_url": "https://rseng.github.io/software/repository/github/brentp/hts-nim-tools", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/hts-nim-tools"}, {"uid": "github/brentp/vcfanno", "html_url": "https://rseng.github.io/software/repository/github/brentp/vcfanno", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/vcfanno"}, {"uid": "github/brentp/smoove", "html_url": "https://rseng.github.io/software/repository/github/brentp/smoove", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/smoove"}, {"uid": "github/brentp/geneimpacts", "html_url": "https://rseng.github.io/software/repository/github/brentp/geneimpacts", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/geneimpacts"}, {"uid": "github/brentp/cyvcf2", "html_url": "https://rseng.github.io/software/repository/github/brentp/cyvcf2", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cyvcf2"}, {"uid": "github/brentp/nim-lapper", "html_url": "https://rseng.github.io/software/repository/github/brentp/nim-lapper", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/nim-lapper"}, {"uid": "github/brentp/peddy", "html_url": "https://rseng.github.io/software/repository/github/brentp/peddy", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/peddy"}, {"uid": "github/brentp/mosdepth", "html_url": "https://rseng.github.io/software/repository/github/brentp/mosdepth", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/mosdepth"}, {"uid": "github/swiftbiosciences/primerclip", "html_url": "https://rseng.github.io/software/repository/github/swiftbiosciences/primerclip", "api_url": "https://rseng.github.io/software/api/repos/github/swiftbiosciences/primerclip"}, {"uid": "github/big-data-lab-team/spot", "html_url": "https://rseng.github.io/software/repository/github/big-data-lab-team/spot", "api_url": "https://rseng.github.io/software/api/repos/github/big-data-lab-team/spot"}, {"uid": "github/percolator/percolator", "html_url": "https://rseng.github.io/software/repository/github/percolator/percolator", "api_url": "https://rseng.github.io/software/api/repos/github/percolator/percolator"}, {"uid": "github/QingyuLiaib/PLA-MoRe", "html_url": "https://rseng.github.io/software/repository/github/QingyuLiaib/PLA-MoRe", "api_url": "https://rseng.github.io/software/api/repos/github/QingyuLiaib/PLA-MoRe"}, {"uid": "github/atzberg/mlmod", "html_url": "https://rseng.github.io/software/repository/github/atzberg/mlmod", "api_url": "https://rseng.github.io/software/api/repos/github/atzberg/mlmod"}, {"uid": "github/huishenlab/biscuit", "html_url": "https://rseng.github.io/software/repository/github/huishenlab/biscuit", "api_url": "https://rseng.github.io/software/api/repos/github/huishenlab/biscuit"}, {"uid": "github/sjbeckett/localcovid19now", "html_url": "https://rseng.github.io/software/repository/github/sjbeckett/localcovid19now", "api_url": "https://rseng.github.io/software/api/repos/github/sjbeckett/localcovid19now"}, {"uid": "github/USEPA/MCSimMod", "html_url": "https://rseng.github.io/software/repository/github/USEPA/MCSimMod", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/MCSimMod"}, {"uid": "github/USEPA/harmonize-wq", "html_url": "https://rseng.github.io/software/repository/github/USEPA/harmonize-wq", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/harmonize-wq"}, {"uid": "github/USEPA/peat", "html_url": "https://rseng.github.io/software/repository/github/USEPA/peat", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/peat"}, {"uid": "github/USEPA/SSN2", "html_url": "https://rseng.github.io/software/repository/github/USEPA/SSN2", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/SSN2"}, {"uid": "github/USEPA/nsink", "html_url": "https://rseng.github.io/software/repository/github/USEPA/nsink", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/nsink"}, {"uid": "github/PhysiBoSS/PhysiBoSS", "html_url": "https://rseng.github.io/software/repository/github/PhysiBoSS/PhysiBoSS", "api_url": "https://rseng.github.io/software/api/repos/github/PhysiBoSS/PhysiBoSS"}, {"uid": "github/GeodynamicWorldBuilder/WorldBuilder", "html_url": "https://rseng.github.io/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/GeodynamicWorldBuilder/WorldBuilder"}, {"uid": "github/2decomp-fft/2decomp-fft", "html_url": "https://rseng.github.io/software/repository/github/2decomp-fft/2decomp-fft", "api_url": "https://rseng.github.io/software/api/repos/github/2decomp-fft/2decomp-fft"}, {"uid": "github/COSMIC-PopSynth/COSMIC", "html_url": "https://rseng.github.io/software/repository/github/COSMIC-PopSynth/COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/COSMIC-PopSynth/COSMIC"}, {"uid": "github/DrMarc/slab", "html_url": "https://rseng.github.io/software/repository/github/DrMarc/slab", "api_url": "https://rseng.github.io/software/api/repos/github/DrMarc/slab"}, {"uid": "github/RozanskiT/suppnet", "html_url": "https://rseng.github.io/software/repository/github/RozanskiT/suppnet", "api_url": "https://rseng.github.io/software/api/repos/github/RozanskiT/suppnet"}, {"uid": "github/YenWenWang/HapDipKinship", "html_url": "https://rseng.github.io/software/repository/github/YenWenWang/HapDipKinship", "api_url": "https://rseng.github.io/software/api/repos/github/YenWenWang/HapDipKinship"}, {"uid": "github/BradyAJohnston/MolecularNodes", "html_url": "https://rseng.github.io/software/repository/github/BradyAJohnston/MolecularNodes", "api_url": "https://rseng.github.io/software/api/repos/github/BradyAJohnston/MolecularNodes"}, {"uid": "github/rribeiro-sci/pygomodo", "html_url": "https://rseng.github.io/software/repository/github/rribeiro-sci/pygomodo", "api_url": "https://rseng.github.io/software/api/repos/github/rribeiro-sci/pygomodo"}, {"uid": "github/vrodgom/statmorph", "html_url": "https://rseng.github.io/software/repository/github/vrodgom/statmorph", "api_url": "https://rseng.github.io/software/api/repos/github/vrodgom/statmorph"}, {"uid": "github/VALENCE-software/VALENCE", "html_url": "https://rseng.github.io/software/repository/github/VALENCE-software/VALENCE", "api_url": "https://rseng.github.io/software/api/repos/github/VALENCE-software/VALENCE"}, {"uid": "github/RenLabBioinformatics/M6Allele", "html_url": "https://rseng.github.io/software/repository/github/RenLabBioinformatics/M6Allele", "api_url": "https://rseng.github.io/software/api/repos/github/RenLabBioinformatics/M6Allele"}, {"uid": "github/jesford/cluster-lensing", "html_url": "https://rseng.github.io/software/repository/github/jesford/cluster-lensing", "api_url": "https://rseng.github.io/software/api/repos/github/jesford/cluster-lensing"}, {"uid": "github/unmannedlab/ekf_cal", "html_url": "https://rseng.github.io/software/repository/github/unmannedlab/ekf_cal", "api_url": "https://rseng.github.io/software/api/repos/github/unmannedlab/ekf_cal"}, {"uid": "github/guynir42/radon", "html_url": "https://rseng.github.io/software/repository/github/guynir42/radon", "api_url": "https://rseng.github.io/software/api/repos/github/guynir42/radon"}, {"uid": "github/Blosc/c-blosc", "html_url": "https://rseng.github.io/software/repository/github/Blosc/c-blosc", "api_url": "https://rseng.github.io/software/api/repos/github/Blosc/c-blosc"}, {"uid": "github/amkrajewski/nimCSO", "html_url": "https://rseng.github.io/software/repository/github/amkrajewski/nimCSO", "api_url": "https://rseng.github.io/software/api/repos/github/amkrajewski/nimCSO"}, {"uid": "github/ouyang-lab/PRAS", "html_url": "https://rseng.github.io/software/repository/github/ouyang-lab/PRAS", "api_url": "https://rseng.github.io/software/api/repos/github/ouyang-lab/PRAS"}, {"uid": "github/ogotoh/spaln", "html_url": "https://rseng.github.io/software/repository/github/ogotoh/spaln", "api_url": "https://rseng.github.io/software/api/repos/github/ogotoh/spaln"}, {"uid": "github/lanzen/ampliconnoise", "html_url": "https://rseng.github.io/software/repository/github/lanzen/ampliconnoise", "api_url": "https://rseng.github.io/software/api/repos/github/lanzen/ampliconnoise"}, {"uid": "github/jaschers/damspi", "html_url": "https://rseng.github.io/software/repository/github/jaschers/damspi", "api_url": "https://rseng.github.io/software/api/repos/github/jaschers/damspi"}, {"uid": "github/uclchem/SpectralRadex", "html_url": "https://rseng.github.io/software/repository/github/uclchem/SpectralRadex", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/SpectralRadex"}, {"uid": "github/uclchem/Chemulator", "html_url": "https://rseng.github.io/software/repository/github/uclchem/Chemulator", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/Chemulator"}, {"uid": "github/Orin-beep/PlasGO", "html_url": "https://rseng.github.io/software/repository/github/Orin-beep/PlasGO", "api_url": "https://rseng.github.io/software/api/repos/github/Orin-beep/PlasGO"}, {"uid": "github/nathanchara/l1periodogram", "html_url": "https://rseng.github.io/software/repository/github/nathanchara/l1periodogram", "api_url": "https://rseng.github.io/software/api/repos/github/nathanchara/l1periodogram"}, {"uid": "github/hasindu2008/slow5tools", "html_url": "https://rseng.github.io/software/repository/github/hasindu2008/slow5tools", "api_url": "https://rseng.github.io/software/api/repos/github/hasindu2008/slow5tools"}, {"uid": "github/fair-software/fairtally", "html_url": "https://rseng.github.io/software/repository/github/fair-software/fairtally", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/fairtally"}, {"uid": "github/fair-software/howfairis", "html_url": "https://rseng.github.io/software/repository/github/fair-software/howfairis", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/howfairis"}, {"uid": "github/rvaser/sword", "html_url": "https://rseng.github.io/software/repository/github/rvaser/sword", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/sword"}, {"uid": "github/rvaser/rampler", "html_url": "https://rseng.github.io/software/repository/github/rvaser/rampler", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/rampler"}, {"uid": "github/rvaser/spoa", "html_url": "https://rseng.github.io/software/repository/github/rvaser/spoa", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/spoa"}, {"uid": "github/rvaser/bioparser", "html_url": "https://rseng.github.io/software/repository/github/rvaser/bioparser", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/bioparser"}, {"uid": "github/rvaser/thread_pool", "html_url": "https://rseng.github.io/software/repository/github/rvaser/thread_pool", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/thread_pool"}, {"uid": "github/Zilong-Li/PCAone", "html_url": "https://rseng.github.io/software/repository/github/Zilong-Li/PCAone", "api_url": "https://rseng.github.io/software/api/repos/github/Zilong-Li/PCAone"}, {"uid": "github/PACurran/MCSpearman", "html_url": "https://rseng.github.io/software/repository/github/PACurran/MCSpearman", "api_url": "https://rseng.github.io/software/api/repos/github/PACurran/MCSpearman"}, {"uid": "github/flu-crew/smot", "html_url": "https://rseng.github.io/software/repository/github/flu-crew/smot", "api_url": "https://rseng.github.io/software/api/repos/github/flu-crew/smot"}, {"uid": "github/hypre-space/hypredrive", "html_url": "https://rseng.github.io/software/repository/github/hypre-space/hypredrive", "api_url": "https://rseng.github.io/software/api/repos/github/hypre-space/hypredrive"}, {"uid": "github/yymao/abundancematching", "html_url": "https://rseng.github.io/software/repository/github/yymao/abundancematching", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/abundancematching"}, {"uid": "github/yymao/adstex", "html_url": "https://rseng.github.io/software/repository/github/yymao/adstex", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/adstex"}, {"uid": "github/ZhaiLab-SUSTech/FLEPSeq", "html_url": "https://rseng.github.io/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaiLab-SUSTech/FLEPSeq"}, {"uid": "github/COVID-IWG/epimargin", "html_url": "https://rseng.github.io/software/repository/github/COVID-IWG/epimargin", "api_url": "https://rseng.github.io/software/api/repos/github/COVID-IWG/epimargin"}, {"uid": "github/marius311/cosmoslik", "html_url": "https://rseng.github.io/software/repository/github/marius311/cosmoslik", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/cosmoslik"}, {"uid": "github/marius311/pypico", "html_url": "https://rseng.github.io/software/repository/github/marius311/pypico", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/pypico"}, {"uid": "github/paulbrodersen/netgraph", "html_url": "https://rseng.github.io/software/repository/github/paulbrodersen/netgraph", "api_url": "https://rseng.github.io/software/api/repos/github/paulbrodersen/netgraph"}, {"uid": "github/LuisGoncalves1/CLOWN", "html_url": "https://rseng.github.io/software/repository/github/LuisGoncalves1/CLOWN", "api_url": "https://rseng.github.io/software/api/repos/github/LuisGoncalves1/CLOWN"}, {"uid": "github/domschrei/mallob", "html_url": "https://rseng.github.io/software/repository/github/domschrei/mallob", "api_url": "https://rseng.github.io/software/api/repos/github/domschrei/mallob"}, {"uid": "github/wetransform-os/ProMCDA", "html_url": "https://rseng.github.io/software/repository/github/wetransform-os/ProMCDA", "api_url": "https://rseng.github.io/software/api/repos/github/wetransform-os/ProMCDA"}, {"uid": "github/youngjookim/sdr", "html_url": "https://rseng.github.io/software/repository/github/youngjookim/sdr", "api_url": "https://rseng.github.io/software/api/repos/github/youngjookim/sdr"}, {"uid": "github/brandon-rhodes/python-jplephem", "html_url": "https://rseng.github.io/software/repository/github/brandon-rhodes/python-jplephem", "api_url": "https://rseng.github.io/software/api/repos/github/brandon-rhodes/python-jplephem"}, {"uid": "github/thomaspinder/GPJax", "html_url": "https://rseng.github.io/software/repository/github/thomaspinder/GPJax", "api_url": "https://rseng.github.io/software/api/repos/github/thomaspinder/GPJax"}, {"uid": "github/marver17/DICOMSEG_Converter", "html_url": "https://rseng.github.io/software/repository/github/marver17/DICOMSEG_Converter", "api_url": "https://rseng.github.io/software/api/repos/github/marver17/DICOMSEG_Converter"}, {"uid": "github/rajewsky-lab/dropbead", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/dropbead", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/dropbead"}, {"uid": "github/rajewsky-lab/novosparc", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/novosparc", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/novosparc"}, {"uid": "github/rajewsky-lab/spacemake", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/spacemake", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/spacemake"}, {"uid": "github/JulianKarlBauer/mechkit", "html_url": "https://rseng.github.io/software/repository/github/JulianKarlBauer/mechkit", "api_url": "https://rseng.github.io/software/api/repos/github/JulianKarlBauer/mechkit"}, {"uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", "html_url": "https://rseng.github.io/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", "api_url": "https://rseng.github.io/software/api/repos/github/ismael-mendoza/ShapeMeasurementFisherFormalism"}, {"uid": "github/martenlourens/pySDR", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/pySDR", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/pySDR"}, {"uid": "github/martenlourens/SHARC", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/SHARC", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/SHARC"}, {"uid": "github/suneeshjacob/ACRoD", "html_url": "https://rseng.github.io/software/repository/github/suneeshjacob/ACRoD", "api_url": "https://rseng.github.io/software/api/repos/github/suneeshjacob/ACRoD"}, {"uid": "github/sagepublishing/rejected_article_tracker_pkg", "html_url": "https://rseng.github.io/software/repository/github/sagepublishing/rejected_article_tracker_pkg", "api_url": "https://rseng.github.io/software/api/repos/github/sagepublishing/rejected_article_tracker_pkg"}, {"uid": "github/liuhao-cn/fastSHT", "html_url": "https://rseng.github.io/software/repository/github/liuhao-cn/fastSHT", "api_url": "https://rseng.github.io/software/api/repos/github/liuhao-cn/fastSHT"}, {"uid": "github/LucaMalavolta/CCFpams", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/CCFpams", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/CCFpams"}, {"uid": "github/LucaMalavolta/PyORBIT", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/PyORBIT", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/PyORBIT"}, {"uid": "github/ericmandel/funtools", "html_url": "https://rseng.github.io/software/repository/github/ericmandel/funtools", "api_url": "https://rseng.github.io/software/api/repos/github/ericmandel/funtools"}, {"uid": "github/carrerajimenez/pyCatIndex", "html_url": "https://rseng.github.io/software/repository/github/carrerajimenez/pyCatIndex", "api_url": "https://rseng.github.io/software/api/repos/github/carrerajimenez/pyCatIndex"}, {"uid": "github/hyex-research/AquaFetch", "html_url": "https://rseng.github.io/software/repository/github/hyex-research/AquaFetch", "api_url": "https://rseng.github.io/software/api/repos/github/hyex-research/AquaFetch"}, {"uid": "github/oliverphilcox/Spectra-Without-Windows", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Spectra-Without-Windows", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Spectra-Without-Windows"}, {"uid": "github/oliverphilcox/PolyBin3D", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin3D", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin3D"}, {"uid": "github/oliverphilcox/EffectiveHalos", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/EffectiveHalos", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/EffectiveHalos"}, {"uid": "github/oliverphilcox/HADES", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HADES", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HADES"}, {"uid": "github/oliverphilcox/PolyBin", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin"}, {"uid": "github/oliverphilcox/HIPSTER", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HIPSTER", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HIPSTER"}, {"uid": "github/oliverphilcox/Keplers-Goat-Herd", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Keplers-Goat-Herd", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Keplers-Goat-Herd"}, {"uid": "github/oliverphilcox/encore", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/encore", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/encore"}, {"uid": "github/oliverphilcox/RascalC", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/RascalC", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/RascalC"}, {"uid": "github/oliverphilcox/OneLoopBispectrum", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/OneLoopBispectrum", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/OneLoopBispectrum"}, {"uid": "github/Peter-Hogg/SLAP2_Utils", "html_url": "https://rseng.github.io/software/repository/github/Peter-Hogg/SLAP2_Utils", "api_url": "https://rseng.github.io/software/api/repos/github/Peter-Hogg/SLAP2_Utils"}, {"uid": "github/nach00gar/16SMicrobiomeMLFS", "html_url": "https://rseng.github.io/software/repository/github/nach00gar/16SMicrobiomeMLFS", "api_url": "https://rseng.github.io/software/api/repos/github/nach00gar/16SMicrobiomeMLFS"}, {"uid": "github/HERA-Team/hera_opm", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/hera_opm", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/hera_opm"}, {"uid": "github/HERA-Team/matvis", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/matvis", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/matvis"}, {"uid": "github/HERA-Team/aipy", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/aipy", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/aipy"}, {"uid": "github/rychallener/ThERESA", "html_url": "https://rseng.github.io/software/repository/github/rychallener/ThERESA", "api_url": "https://rseng.github.io/software/api/repos/github/rychallener/ThERESA"}, {"uid": "github/nationalparkservice/NPSdataverse", "html_url": "https://rseng.github.io/software/repository/github/nationalparkservice/NPSdataverse", "api_url": "https://rseng.github.io/software/api/repos/github/nationalparkservice/NPSdataverse"}, {"uid": "github/c3s-magic/c3s-magic-wps", "html_url": "https://rseng.github.io/software/repository/github/c3s-magic/c3s-magic-wps", "api_url": "https://rseng.github.io/software/api/repos/github/c3s-magic/c3s-magic-wps"}, {"uid": "github/LBNL-ETA/MSWH", "html_url": "https://rseng.github.io/software/repository/github/LBNL-ETA/MSWH", "api_url": "https://rseng.github.io/software/api/repos/github/LBNL-ETA/MSWH"}, {"uid": "github/UcarLab/AMULET", "html_url": "https://rseng.github.io/software/repository/github/UcarLab/AMULET", "api_url": "https://rseng.github.io/software/api/repos/github/UcarLab/AMULET"}, {"uid": "github/biosimulations/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/biosimulations/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/biosimulations/Biosimulations"}, {"uid": "github/ToHanwei/Genome2OR", "html_url": "https://rseng.github.io/software/repository/github/ToHanwei/Genome2OR", "api_url": "https://rseng.github.io/software/api/repos/github/ToHanwei/Genome2OR"}, {"uid": "github/gem-pasteur/macsylib", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsylib", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsylib"}, {"uid": "github/gem-pasteur/Integron_Finder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/Integron_Finder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/Integron_Finder"}, {"uid": "github/gem-pasteur/macsyfinder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsyfinder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsyfinder"}, {"uid": "github/hildebra/LCA", "html_url": "https://rseng.github.io/software/repository/github/hildebra/LCA", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/LCA"}, {"uid": "github/hildebra/sdm", "html_url": "https://rseng.github.io/software/repository/github/hildebra/sdm", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/sdm"}, {"uid": "github/JakobBD/pounce", "html_url": "https://rseng.github.io/software/repository/github/JakobBD/pounce", "api_url": "https://rseng.github.io/software/api/repos/github/JakobBD/pounce"}, {"uid": "github/Pinlyu3/LRLoop", "html_url": "https://rseng.github.io/software/repository/github/Pinlyu3/LRLoop", "api_url": "https://rseng.github.io/software/api/repos/github/Pinlyu3/LRLoop"}, {"uid": "github/pharo-project/pharo", "html_url": "https://rseng.github.io/software/repository/github/pharo-project/pharo", "api_url": "https://rseng.github.io/software/api/repos/github/pharo-project/pharo"}, {"uid": "github/dspelaez/extended-wdm", "html_url": "https://rseng.github.io/software/repository/github/dspelaez/extended-wdm", "api_url": "https://rseng.github.io/software/api/repos/github/dspelaez/extended-wdm"}, {"uid": "github/nayu0419/stMMR", "html_url": "https://rseng.github.io/software/repository/github/nayu0419/stMMR", "api_url": "https://rseng.github.io/software/api/repos/github/nayu0419/stMMR"}, {"uid": "github/AstraZeneca/kallisto", "html_url": "https://rseng.github.io/software/repository/github/AstraZeneca/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/AstraZeneca/kallisto"}, {"uid": "github/CaymanUnterborn/ExoPlex", "html_url": "https://rseng.github.io/software/repository/github/CaymanUnterborn/ExoPlex", "api_url": "https://rseng.github.io/software/api/repos/github/CaymanUnterborn/ExoPlex"}, {"uid": "github/auranic/ClinTrajan", "html_url": "https://rseng.github.io/software/repository/github/auranic/ClinTrajan", "api_url": "https://rseng.github.io/software/api/repos/github/auranic/ClinTrajan"}, {"uid": "github/pjcigan/obsplanning", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/obsplanning", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/obsplanning"}, {"uid": "github/pjcigan/pysymlog", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/pysymlog", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/pysymlog"}, {"uid": "github/pjcigan/multicolorfits", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/multicolorfits", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/multicolorfits"}, {"uid": "github/pavolgaj/OCFit", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/OCFit", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/OCFit"}, {"uid": "github/pavolgaj/ObsPlanner", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/ObsPlanner", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/ObsPlanner"}, {"uid": "github/henrysky/astroNN", "html_url": "https://rseng.github.io/software/repository/github/henrysky/astroNN", "api_url": "https://rseng.github.io/software/api/repos/github/henrysky/astroNN"}, {"uid": "github/dankelley/oce", "html_url": "https://rseng.github.io/software/repository/github/dankelley/oce", "api_url": "https://rseng.github.io/software/api/repos/github/dankelley/oce"}, {"uid": "github/Ramialison-Lab-ARMI/3DCardiomics", "html_url": "https://rseng.github.io/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", "api_url": "https://rseng.github.io/software/api/repos/github/Ramialison-Lab-ARMI/3DCardiomics"}, {"uid": "github/hauselin/ollama-r", "html_url": "https://rseng.github.io/software/repository/github/hauselin/ollama-r", "api_url": "https://rseng.github.io/software/api/repos/github/hauselin/ollama-r"}, {"uid": "github/statsmodels/statsmodels", "html_url": "https://rseng.github.io/software/repository/github/statsmodels/statsmodels", "api_url": "https://rseng.github.io/software/api/repos/github/statsmodels/statsmodels"}, {"uid": "github/takfung/ResDisMapper", "html_url": "https://rseng.github.io/software/repository/github/takfung/ResDisMapper", "api_url": "https://rseng.github.io/software/api/repos/github/takfung/ResDisMapper"}, {"uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "html_url": "https://rseng.github.io/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "api_url": "https://rseng.github.io/software/api/repos/github/bengeof/QPoweredCompound2DeNovoDrugPropMax"}, {"uid": "github/scikit-learn/scikit-learn", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn/scikit-learn", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn/scikit-learn"}, {"uid": "github/nickk124/RCR", "html_url": "https://rseng.github.io/software/repository/github/nickk124/RCR", "api_url": "https://rseng.github.io/software/api/repos/github/nickk124/RCR"}, {"uid": "github/devosoft/avida", "html_url": "https://rseng.github.io/software/repository/github/devosoft/avida", "api_url": "https://rseng.github.io/software/api/repos/github/devosoft/avida"}, {"uid": "github/MingBit/PySCNet", "html_url": "https://rseng.github.io/software/repository/github/MingBit/PySCNet", "api_url": "https://rseng.github.io/software/api/repos/github/MingBit/PySCNet"}, {"uid": "github/RelNucAs/bns_nurates", "html_url": "https://rseng.github.io/software/repository/github/RelNucAs/bns_nurates", "api_url": "https://rseng.github.io/software/api/repos/github/RelNucAs/bns_nurates"}, {"uid": "github/MOSAICS-NIH/MOSAICS", "html_url": "https://rseng.github.io/software/repository/github/MOSAICS-NIH/MOSAICS", "api_url": "https://rseng.github.io/software/api/repos/github/MOSAICS-NIH/MOSAICS"}, {"uid": "github/purmortal/galcraft", "html_url": "https://rseng.github.io/software/repository/github/purmortal/galcraft", "api_url": "https://rseng.github.io/software/api/repos/github/purmortal/galcraft"}, {"uid": "github/aritraghsh09/GaMorNet", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMorNet", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMorNet"}, {"uid": "github/aritraghsh09/GaMPEN", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMPEN", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMPEN"}, {"uid": "github/lijing28101/maize_pyrpipe", "html_url": "https://rseng.github.io/software/repository/github/lijing28101/maize_pyrpipe", "api_url": "https://rseng.github.io/software/api/repos/github/lijing28101/maize_pyrpipe"}, {"uid": "github/ashleefv/ACEInhibPKPD", "html_url": "https://rseng.github.io/software/repository/github/ashleefv/ACEInhibPKPD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleefv/ACEInhibPKPD"}, {"uid": "github/Jashcraf/katsu", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/katsu", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/katsu"}, {"uid": "github/Jashcraf/poke", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/poke", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/poke"}, {"uid": "github/sinc-lab/miRe2e", "html_url": "https://rseng.github.io/software/repository/github/sinc-lab/miRe2e", "api_url": "https://rseng.github.io/software/api/repos/github/sinc-lab/miRe2e"}, {"uid": "github/ska-sa/hibayes", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/hibayes", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/hibayes"}, {"uid": "github/ska-sa/katdal", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/katdal", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/katdal"}, {"uid": "github/snakesonabrain/groundhog", "html_url": "https://rseng.github.io/software/repository/github/snakesonabrain/groundhog", "api_url": "https://rseng.github.io/software/api/repos/github/snakesonabrain/groundhog"}, {"uid": "github/Gaiana/nirdust", "html_url": "https://rseng.github.io/software/repository/github/Gaiana/nirdust", "api_url": "https://rseng.github.io/software/api/repos/github/Gaiana/nirdust"}, {"uid": "github/dsavransky/EXOSIMS", "html_url": "https://rseng.github.io/software/repository/github/dsavransky/EXOSIMS", "api_url": "https://rseng.github.io/software/api/repos/github/dsavransky/EXOSIMS"}, {"uid": "github/gpantel/MolPainter", "html_url": "https://rseng.github.io/software/repository/github/gpantel/MolPainter", "api_url": "https://rseng.github.io/software/api/repos/github/gpantel/MolPainter"}, {"uid": "github/merenlab/anvio", "html_url": "https://rseng.github.io/software/repository/github/merenlab/anvio", "api_url": "https://rseng.github.io/software/api/repos/github/merenlab/anvio"}, {"uid": "github/BobChallen/Basic-mzml-plotter", "html_url": "https://rseng.github.io/software/repository/github/BobChallen/Basic-mzml-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/BobChallen/Basic-mzml-plotter"}, {"uid": "github/PENTACLE-Team/PENTACLE", "html_url": "https://rseng.github.io/software/repository/github/PENTACLE-Team/PENTACLE", "api_url": "https://rseng.github.io/software/api/repos/github/PENTACLE-Team/PENTACLE"}, {"uid": "github/AlidesChimin/SATA", "html_url": "https://rseng.github.io/software/repository/github/AlidesChimin/SATA", "api_url": "https://rseng.github.io/software/api/repos/github/AlidesChimin/SATA"}, {"uid": "github/baptklein/ATMOSPHERIX_DATA_RED", "html_url": "https://rseng.github.io/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", "api_url": "https://rseng.github.io/software/api/repos/github/baptklein/ATMOSPHERIX_DATA_RED"}, {"uid": "github/niosh-mining/obsplus", "html_url": "https://rseng.github.io/software/repository/github/niosh-mining/obsplus", "api_url": "https://rseng.github.io/software/api/repos/github/niosh-mining/obsplus"}, {"uid": "github/OliverFHD/GPUniverse", "html_url": "https://rseng.github.io/software/repository/github/OliverFHD/GPUniverse", "api_url": "https://rseng.github.io/software/api/repos/github/OliverFHD/GPUniverse"}, {"uid": "github/savage13/sacio", "html_url": "https://rseng.github.io/software/repository/github/savage13/sacio", "api_url": "https://rseng.github.io/software/api/repos/github/savage13/sacio"}, {"uid": "github/changhoonhahn/pySpectrum", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/pySpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/pySpectrum"}, {"uid": "github/changhoonhahn/provabgs", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/provabgs", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/provabgs"}, {"uid": "github/changhoonhahn/haloflow", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/haloflow"}, {"uid": "github/dkirkby/gphist", "html_url": "https://rseng.github.io/software/repository/github/dkirkby/gphist", "api_url": "https://rseng.github.io/software/api/repos/github/dkirkby/gphist"}, {"uid": "github/musoke/ultradark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/ultradark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/ultradark.jl"}, {"uid": "github/musoke/UltraDark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/UltraDark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/UltraDark.jl"}, {"uid": "github/nuc-astro/winnet", "html_url": "https://rseng.github.io/software/repository/github/nuc-astro/winnet", "api_url": "https://rseng.github.io/software/api/repos/github/nuc-astro/winnet"}, {"uid": "github/PapenfussLab/gridss", "html_url": "https://rseng.github.io/software/repository/github/PapenfussLab/gridss", "api_url": "https://rseng.github.io/software/api/repos/github/PapenfussLab/gridss"}, {"uid": "github/pyro-kinetics/pyrokinetics", "html_url": "https://rseng.github.io/software/repository/github/pyro-kinetics/pyrokinetics", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-kinetics/pyrokinetics"}, {"uid": "github/illumina/pyflow", "html_url": "https://rseng.github.io/software/repository/github/illumina/pyflow", "api_url": "https://rseng.github.io/software/api/repos/github/illumina/pyflow"}, {"uid": "github/tidymodels/stacks", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/stacks", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/stacks"}, {"uid": "github/tidymodels/infer", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/infer", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/infer"}, {"uid": "github/tlverse/hal9001", "html_url": "https://rseng.github.io/software/repository/github/tlverse/hal9001", "api_url": "https://rseng.github.io/software/api/repos/github/tlverse/hal9001"}, {"uid": "github/microplastics-cluster/fragment-mnp", "html_url": "https://rseng.github.io/software/repository/github/microplastics-cluster/fragment-mnp", "api_url": "https://rseng.github.io/software/api/repos/github/microplastics-cluster/fragment-mnp"}, {"uid": "github/NiallJeffrey/DeepMass", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/DeepMass", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/DeepMass"}, {"uid": "github/NiallJeffrey/BornRaytrace", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/BornRaytrace", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/BornRaytrace"}, {"uid": "github/rainwoodman/bigfile", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/bigfile"}, {"uid": "github/rainwoodman/kdcount", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/kdcount", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/kdcount"}, {"uid": "github/bethgelab/foolbox", "html_url": "https://rseng.github.io/software/repository/github/bethgelab/foolbox", "api_url": "https://rseng.github.io/software/api/repos/github/bethgelab/foolbox"}, {"uid": "github/alexdobin/STAR", "html_url": "https://rseng.github.io/software/repository/github/alexdobin/STAR", "api_url": "https://rseng.github.io/software/api/repos/github/alexdobin/STAR"}, {"uid": "github/SWIFTSIM/emulator", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/emulator", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/emulator"}, {"uid": "github/SWIFTSIM/SOAP", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/SOAP", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/SOAP"}, {"uid": "github/utpal-singh/SAnTex", "html_url": "https://rseng.github.io/software/repository/github/utpal-singh/SAnTex", "api_url": "https://rseng.github.io/software/api/repos/github/utpal-singh/SAnTex"}, {"uid": "github/alexfields/ORF-RATER", "html_url": "https://rseng.github.io/software/repository/github/alexfields/ORF-RATER", "api_url": "https://rseng.github.io/software/api/repos/github/alexfields/ORF-RATER"}, {"uid": "github/OpenMDAO/dymos", "html_url": "https://rseng.github.io/software/repository/github/OpenMDAO/dymos", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMDAO/dymos"}, {"uid": "github/edwardoughton/itmlogic", "html_url": "https://rseng.github.io/software/repository/github/edwardoughton/itmlogic", "api_url": "https://rseng.github.io/software/api/repos/github/edwardoughton/itmlogic"}, {"uid": "github/elkebir-group/derna", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/derna", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/derna"}, {"uid": "github/elkebir-group/Jumper", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/Jumper", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/Jumper"}, {"uid": "github/altjerue/paramo", "html_url": "https://rseng.github.io/software/repository/github/altjerue/paramo", "api_url": "https://rseng.github.io/software/api/repos/github/altjerue/paramo"}, {"uid": "github/KerryAM-R/ggVolcanoR", "html_url": "https://rseng.github.io/software/repository/github/KerryAM-R/ggVolcanoR", "api_url": "https://rseng.github.io/software/api/repos/github/KerryAM-R/ggVolcanoR"}, {"uid": "github/HUST-DataMan/FRMC", "html_url": "https://rseng.github.io/software/repository/github/HUST-DataMan/FRMC", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-DataMan/FRMC"}, {"uid": "github/BD2KGenomics/toil", "html_url": "https://rseng.github.io/software/repository/github/BD2KGenomics/toil", "api_url": "https://rseng.github.io/software/api/repos/github/BD2KGenomics/toil"}, {"uid": "github/sib-swiss/pftools3", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/pftools3", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/pftools3"}, {"uid": "github/sib-swiss/glittr", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/glittr", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/glittr"}, {"uid": "github/Acellera/htmd", "html_url": "https://rseng.github.io/software/repository/github/Acellera/htmd", "api_url": "https://rseng.github.io/software/api/repos/github/Acellera/htmd"}, {"uid": "github/JanLeppert/GasChromatographySimulator.jl", "html_url": "https://rseng.github.io/software/repository/github/JanLeppert/GasChromatographySimulator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JanLeppert/GasChromatographySimulator.jl"}, {"uid": "github/roualdes/bridgestan", "html_url": "https://rseng.github.io/software/repository/github/roualdes/bridgestan", "api_url": "https://rseng.github.io/software/api/repos/github/roualdes/bridgestan"}, {"uid": "github/FabioRigamonti/pyADfit", "html_url": "https://rseng.github.io/software/repository/github/FabioRigamonti/pyADfit", "api_url": "https://rseng.github.io/software/api/repos/github/FabioRigamonti/pyADfit"}, {"uid": "github/PolyChord/PolyChordLite", "html_url": "https://rseng.github.io/software/repository/github/PolyChord/PolyChordLite", "api_url": "https://rseng.github.io/software/api/repos/github/PolyChord/PolyChordLite"}, {"uid": "github/mranuraggarg/supernovae_classification", "html_url": "https://rseng.github.io/software/repository/github/mranuraggarg/supernovae_classification", "api_url": "https://rseng.github.io/software/api/repos/github/mranuraggarg/supernovae_classification"}, {"uid": "github/computproteomics/ProteoMaker", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/ProteoMaker", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/ProteoMaker"}, {"uid": "github/computproteomics/OmicsQ", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/OmicsQ", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/OmicsQ"}, {"uid": "github/computproteomics/PolySTest", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/PolySTest", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/PolySTest"}, {"uid": "github/annajenul/UBayFS", "html_url": "https://rseng.github.io/software/repository/github/annajenul/UBayFS", "api_url": "https://rseng.github.io/software/api/repos/github/annajenul/UBayFS"}, {"uid": "github/yi-jia-li/cue", "html_url": "https://rseng.github.io/software/repository/github/yi-jia-li/cue", "api_url": "https://rseng.github.io/software/api/repos/github/yi-jia-li/cue"}, {"uid": "github/JHayoz/CROCODILE", "html_url": "https://rseng.github.io/software/repository/github/JHayoz/CROCODILE", "api_url": "https://rseng.github.io/software/api/repos/github/JHayoz/CROCODILE"}, {"uid": "github/deniswerth/cosmoflow", "html_url": "https://rseng.github.io/software/repository/github/deniswerth/cosmoflow", "api_url": "https://rseng.github.io/software/api/repos/github/deniswerth/cosmoflow"}, {"uid": "github/bshoshany/OGRe", "html_url": "https://rseng.github.io/software/repository/github/bshoshany/OGRe", "api_url": "https://rseng.github.io/software/api/repos/github/bshoshany/OGRe"}, {"uid": "github/jianhuig/fairmetrics", "html_url": "https://rseng.github.io/software/repository/github/jianhuig/fairmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuig/fairmetrics"}, {"uid": "github/Kennicutt/SAUSERO", "html_url": "https://rseng.github.io/software/repository/github/Kennicutt/SAUSERO", "api_url": "https://rseng.github.io/software/api/repos/github/Kennicutt/SAUSERO"}, {"uid": "github/xfcui/onn4arg", "html_url": "https://rseng.github.io/software/repository/github/xfcui/onn4arg", "api_url": "https://rseng.github.io/software/api/repos/github/xfcui/onn4arg"}, {"uid": "github/RWTH-EBC/FiLiP", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/FiLiP", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/FiLiP"}, {"uid": "github/RWTH-EBC/AixCaliBuHA", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixCaliBuHA", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixCaliBuHA"}, {"uid": "github/RWTH-EBC/AixWeather", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixWeather", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixWeather"}, {"uid": "github/RWTH-EBC/districtgenerator", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/districtgenerator", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/districtgenerator"}, {"uid": "github/ybillchen/particle_spray", "html_url": "https://rseng.github.io/software/repository/github/ybillchen/particle_spray", "api_url": "https://rseng.github.io/software/api/repos/github/ybillchen/particle_spray"}, {"uid": "github/elizabethnewman/hessQuik", "html_url": "https://rseng.github.io/software/repository/github/elizabethnewman/hessQuik", "api_url": "https://rseng.github.io/software/api/repos/github/elizabethnewman/hessQuik"}, {"uid": "github/mperezcarrasco/AnomalyALeRCE", "html_url": "https://rseng.github.io/software/repository/github/mperezcarrasco/AnomalyALeRCE", "api_url": "https://rseng.github.io/software/api/repos/github/mperezcarrasco/AnomalyALeRCE"}, {"uid": "github/hsci-r/finnish-media-scrapers", "html_url": "https://rseng.github.io/software/repository/github/hsci-r/finnish-media-scrapers", "api_url": "https://rseng.github.io/software/api/repos/github/hsci-r/finnish-media-scrapers"}, {"uid": "github/Climdyn/qgs", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/qgs", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/qgs"}, {"uid": "github/Climdyn/auto-AUTO", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/auto-AUTO", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/auto-AUTO"}, {"uid": "github/Ajstros/pyripherals", "html_url": "https://rseng.github.io/software/repository/github/Ajstros/pyripherals", "api_url": "https://rseng.github.io/software/api/repos/github/Ajstros/pyripherals"}, {"uid": "github/faircloth-lab/phyluce", "html_url": "https://rseng.github.io/software/repository/github/faircloth-lab/phyluce", "api_url": "https://rseng.github.io/software/api/repos/github/faircloth-lab/phyluce"}, {"uid": "github/Freakwill/pyrimidine", "html_url": "https://rseng.github.io/software/repository/github/Freakwill/pyrimidine", "api_url": "https://rseng.github.io/software/api/repos/github/Freakwill/pyrimidine"}, {"uid": "github/pyiron/executorlib", "html_url": "https://rseng.github.io/software/repository/github/pyiron/executorlib", "api_url": "https://rseng.github.io/software/api/repos/github/pyiron/executorlib"}, {"uid": "github/Open-ET/flux-data-qaqc", "html_url": "https://rseng.github.io/software/repository/github/Open-ET/flux-data-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/Open-ET/flux-data-qaqc"}, {"uid": "github/wokast/RePrimAnd", "html_url": "https://rseng.github.io/software/repository/github/wokast/RePrimAnd", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/RePrimAnd"}, {"uid": "github/wokast/PyCactus", "html_url": "https://rseng.github.io/software/repository/github/wokast/PyCactus", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/PyCactus"}, {"uid": "github/LabTranslationalArchitectomics/riboWaltz", "html_url": "https://rseng.github.io/software/repository/github/LabTranslationalArchitectomics/riboWaltz", "api_url": "https://rseng.github.io/software/api/repos/github/LabTranslationalArchitectomics/riboWaltz"}, {"uid": "github/FCS-analysis/multipletau", "html_url": "https://rseng.github.io/software/repository/github/FCS-analysis/multipletau", "api_url": "https://rseng.github.io/software/api/repos/github/FCS-analysis/multipletau"}, {"uid": "github/KBNLresearch/ochre", "html_url": "https://rseng.github.io/software/repository/github/KBNLresearch/ochre", "api_url": "https://rseng.github.io/software/api/repos/github/KBNLresearch/ochre"}, {"uid": "github/NeotomaDB/neotoma2", "html_url": "https://rseng.github.io/software/repository/github/NeotomaDB/neotoma2", "api_url": "https://rseng.github.io/software/api/repos/github/NeotomaDB/neotoma2"}, {"uid": "github/kibokov/grumpy", "html_url": "https://rseng.github.io/software/repository/github/kibokov/grumpy", "api_url": "https://rseng.github.io/software/api/repos/github/kibokov/grumpy"}, {"uid": "github/yongsukyee/uncertain_blackholemass", "html_url": "https://rseng.github.io/software/repository/github/yongsukyee/uncertain_blackholemass", "api_url": "https://rseng.github.io/software/api/repos/github/yongsukyee/uncertain_blackholemass"}, {"uid": "github/matthewholman/assist", "html_url": "https://rseng.github.io/software/repository/github/matthewholman/assist", "api_url": "https://rseng.github.io/software/api/repos/github/matthewholman/assist"}, {"uid": "github/aineniamh/snipit", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/snipit", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/snipit"}, {"uid": "github/aineniamh/squirrel", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/squirrel", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/squirrel"}, {"uid": "github/GreenScheduler/cats", "html_url": "https://rseng.github.io/software/repository/github/GreenScheduler/cats", "api_url": "https://rseng.github.io/software/api/repos/github/GreenScheduler/cats"}, {"uid": "github/PIK-LPJmL/lpjmlkit", "html_url": "https://rseng.github.io/software/repository/github/PIK-LPJmL/lpjmlkit", "api_url": "https://rseng.github.io/software/api/repos/github/PIK-LPJmL/lpjmlkit"}, {"uid": "github/cosmodesi/pycorr", "html_url": "https://rseng.github.io/software/repository/github/cosmodesi/pycorr", "api_url": "https://rseng.github.io/software/api/repos/github/cosmodesi/pycorr"}, {"uid": "github/tbrown122387/pf", "html_url": "https://rseng.github.io/software/repository/github/tbrown122387/pf", "api_url": "https://rseng.github.io/software/api/repos/github/tbrown122387/pf"}, {"uid": "github/karlotness/adrt", "html_url": "https://rseng.github.io/software/repository/github/karlotness/adrt", "api_url": "https://rseng.github.io/software/api/repos/github/karlotness/adrt"}, {"uid": "github/DavidT3/XGA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/XGA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/XGA"}, {"uid": "github/DavidT3/DAXA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/DAXA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/DAXA"}, {"uid": "github/florian-lienhard/MM-LSD", "html_url": "https://rseng.github.io/software/repository/github/florian-lienhard/MM-LSD", "api_url": "https://rseng.github.io/software/api/repos/github/florian-lienhard/MM-LSD"}, {"uid": "github/lamyj/odil", "html_url": "https://rseng.github.io/software/repository/github/lamyj/odil", "api_url": "https://rseng.github.io/software/api/repos/github/lamyj/odil"}, {"uid": "github/keflavich/HiGal_SEDfitter", "html_url": "https://rseng.github.io/software/repository/github/keflavich/HiGal_SEDfitter", "api_url": "https://rseng.github.io/software/api/repos/github/keflavich/HiGal_SEDfitter"}, {"uid": "github/dellytools/delly", "html_url": "https://rseng.github.io/software/repository/github/dellytools/delly", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/delly"}, {"uid": "github/dellytools/sansa", "html_url": "https://rseng.github.io/software/repository/github/dellytools/sansa", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/sansa"}, {"uid": "github/d-tear/SIAL", "html_url": "https://rseng.github.io/software/repository/github/d-tear/SIAL", "api_url": "https://rseng.github.io/software/api/repos/github/d-tear/SIAL"}, {"uid": "github/arkavo/CUDA-METRO", "html_url": "https://rseng.github.io/software/repository/github/arkavo/CUDA-METRO", "api_url": "https://rseng.github.io/software/api/repos/github/arkavo/CUDA-METRO"}, {"uid": "github/MillionConcepts/lhorizon", "html_url": "https://rseng.github.io/software/repository/github/MillionConcepts/lhorizon", "api_url": "https://rseng.github.io/software/api/repos/github/MillionConcepts/lhorizon"}, {"uid": "github/dengzhuo-AI/Real-Fundus", "html_url": "https://rseng.github.io/software/repository/github/dengzhuo-AI/Real-Fundus", "api_url": "https://rseng.github.io/software/api/repos/github/dengzhuo-AI/Real-Fundus"}, {"uid": "github/szwiep/py_SBeLT", "html_url": "https://rseng.github.io/software/repository/github/szwiep/py_SBeLT", "api_url": "https://rseng.github.io/software/api/repos/github/szwiep/py_SBeLT"}, {"uid": "github/jonathansick/MoAstro", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/MoAstro", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/MoAstro"}, {"uid": "github/jonathansick/starfish", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/starfish"}, {"uid": "github/jonathansick/skyoffset", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/skyoffset", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/skyoffset"}, {"uid": "github/YuLab-SMU/treeio", "html_url": "https://rseng.github.io/software/repository/github/YuLab-SMU/treeio", "api_url": "https://rseng.github.io/software/api/repos/github/YuLab-SMU/treeio"}, {"uid": "github/GENtle-persons/gentle-m", "html_url": "https://rseng.github.io/software/repository/github/GENtle-persons/gentle-m", "api_url": "https://rseng.github.io/software/api/repos/github/GENtle-persons/gentle-m"}, {"uid": "github/sheneman/clearcut", "html_url": "https://rseng.github.io/software/repository/github/sheneman/clearcut", "api_url": "https://rseng.github.io/software/api/repos/github/sheneman/clearcut"}, {"uid": "github/piernik-dev/piernik", "html_url": "https://rseng.github.io/software/repository/github/piernik-dev/piernik", "api_url": "https://rseng.github.io/software/api/repos/github/piernik-dev/piernik"}, {"uid": "github/BRAIN-TO/GIRFReco.jl", "html_url": "https://rseng.github.io/software/repository/github/BRAIN-TO/GIRFReco.jl", "api_url": "https://rseng.github.io/software/api/repos/github/BRAIN-TO/GIRFReco.jl"}, {"uid": "github/cjneely10/EukMetaSanity", "html_url": "https://rseng.github.io/software/repository/github/cjneely10/EukMetaSanity", "api_url": "https://rseng.github.io/software/api/repos/github/cjneely10/EukMetaSanity"}, {"uid": "github/octapps/octapps", "html_url": "https://rseng.github.io/software/repository/github/octapps/octapps", "api_url": "https://rseng.github.io/software/api/repos/github/octapps/octapps"}, {"uid": "github/uwssg/APS", "html_url": "https://rseng.github.io/software/repository/github/uwssg/APS", "api_url": "https://rseng.github.io/software/api/repos/github/uwssg/APS"}, {"uid": "github/stammler/dustpy", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpy", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpy"}, {"uid": "github/stammler/dustpylib", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpylib", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpylib"}, {"uid": "github/stammler/simframe", "html_url": "https://rseng.github.io/software/repository/github/stammler/simframe", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/simframe"}, {"uid": "github/MyWebIntelligence/MyWebIntelligencePython", "html_url": "https://rseng.github.io/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", "api_url": "https://rseng.github.io/software/api/repos/github/MyWebIntelligence/MyWebIntelligencePython"}, {"uid": "github/Wytamma/snk", "html_url": "https://rseng.github.io/software/repository/github/Wytamma/snk", "api_url": "https://rseng.github.io/software/api/repos/github/Wytamma/snk"}, {"uid": "github/bacpop/ska.rust", "html_url": "https://rseng.github.io/software/repository/github/bacpop/ska.rust", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/ska.rust"}, {"uid": "github/bacpop/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/bacpop/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/PopPUNK"}, {"uid": "github/bcalden/ClusterPyXT", "html_url": "https://rseng.github.io/software/repository/github/bcalden/ClusterPyXT", "api_url": "https://rseng.github.io/software/api/repos/github/bcalden/ClusterPyXT"}, {"uid": "github/NLESC-JCER/QMCTorch", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCTorch", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCTorch"}, {"uid": "github/NLESC-JCER/EigenCuda", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/EigenCuda", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/EigenCuda"}, {"uid": "github/NLESC-JCER/Fortran_Davidson", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/Fortran_Davidson", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/Fortran_Davidson"}, {"uid": "github/NLESC-JCER/QMCblip", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCblip", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCblip"}, {"uid": "github/Sarc-Graph/sarcgraph", "html_url": "https://rseng.github.io/software/repository/github/Sarc-Graph/sarcgraph", "api_url": "https://rseng.github.io/software/api/repos/github/Sarc-Graph/sarcgraph"}, {"uid": "github/chenzhaiyu/abspy", "html_url": "https://rseng.github.io/software/repository/github/chenzhaiyu/abspy", "api_url": "https://rseng.github.io/software/api/repos/github/chenzhaiyu/abspy"}, {"uid": "github/Yingjie4Science/SDGdetector", "html_url": "https://rseng.github.io/software/repository/github/Yingjie4Science/SDGdetector", "api_url": "https://rseng.github.io/software/api/repos/github/Yingjie4Science/SDGdetector"}, {"uid": "github/dkoslicki/TAMPA", "html_url": "https://rseng.github.io/software/repository/github/dkoslicki/TAMPA", "api_url": "https://rseng.github.io/software/api/repos/github/dkoslicki/TAMPA"}, {"uid": "github/TRIQS/ctseg", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/ctseg", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/ctseg"}, {"uid": "github/TRIQS/solid_dmft", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/solid_dmft", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/solid_dmft"}, {"uid": "github/yangxiaolinyn/Lemon", "html_url": "https://rseng.github.io/software/repository/github/yangxiaolinyn/Lemon", "api_url": "https://rseng.github.io/software/api/repos/github/yangxiaolinyn/Lemon"}, {"uid": "github/montilab/nf-gwas-pipeline", "html_url": "https://rseng.github.io/software/repository/github/montilab/nf-gwas-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/montilab/nf-gwas-pipeline"}, {"uid": "github/prdm0/ropenblas", "html_url": "https://rseng.github.io/software/repository/github/prdm0/ropenblas", "api_url": "https://rseng.github.io/software/api/repos/github/prdm0/ropenblas"}, {"uid": "github/yungkipreos/Min-CaLM", "html_url": "https://rseng.github.io/software/repository/github/yungkipreos/Min-CaLM", "api_url": "https://rseng.github.io/software/api/repos/github/yungkipreos/Min-CaLM"}, {"uid": "github/lpantano/seqbuster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqbuster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqbuster"}, {"uid": "github/lpantano/seqcluster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqcluster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqcluster"}, {"uid": "github/blebon/directChillFoam", "html_url": "https://rseng.github.io/software/repository/github/blebon/directChillFoam", "api_url": "https://rseng.github.io/software/api/repos/github/blebon/directChillFoam"}, {"uid": "github/andycasey/sick", "html_url": "https://rseng.github.io/software/repository/github/andycasey/sick", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/sick"}, {"uid": "github/andycasey/smhr", "html_url": "https://rseng.github.io/software/repository/github/andycasey/smhr", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/smhr"}, {"uid": "github/JDabringhausen/BiPoS1", "html_url": "https://rseng.github.io/software/repository/github/JDabringhausen/BiPoS1", "api_url": "https://rseng.github.io/software/api/repos/github/JDabringhausen/BiPoS1"}, {"uid": "github/BioDepot/biodepot-launcher", "html_url": "https://rseng.github.io/software/repository/github/BioDepot/biodepot-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/BioDepot/biodepot-launcher"}, {"uid": "github/hibridon/hibridon", "html_url": "https://rseng.github.io/software/repository/github/hibridon/hibridon", "api_url": "https://rseng.github.io/software/api/repos/github/hibridon/hibridon"}, {"uid": "github/rathnakumars/difference-smoothing", "html_url": "https://rseng.github.io/software/repository/github/rathnakumars/difference-smoothing", "api_url": "https://rseng.github.io/software/api/repos/github/rathnakumars/difference-smoothing"}, {"uid": "github/SterlingYM/astroPIPS", "html_url": "https://rseng.github.io/software/repository/github/SterlingYM/astroPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/SterlingYM/astroPIPS"}, {"uid": "github/jalombar/starsmasher", "html_url": "https://rseng.github.io/software/repository/github/jalombar/starsmasher", "api_url": "https://rseng.github.io/software/api/repos/github/jalombar/starsmasher"}, {"uid": "github/paranoya/population-synthesis-toolkit", "html_url": "https://rseng.github.io/software/repository/github/paranoya/population-synthesis-toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/paranoya/population-synthesis-toolkit"}, {"uid": "github/astrogilda/mirkwood", "html_url": "https://rseng.github.io/software/repository/github/astrogilda/mirkwood", "api_url": "https://rseng.github.io/software/api/repos/github/astrogilda/mirkwood"}, {"uid": "github/chasmani/piecewise-regression", "html_url": "https://rseng.github.io/software/repository/github/chasmani/piecewise-regression", "api_url": "https://rseng.github.io/software/api/repos/github/chasmani/piecewise-regression"}, {"uid": "github/fabiorigamonti/bang", "html_url": "https://rseng.github.io/software/repository/github/fabiorigamonti/bang", "api_url": "https://rseng.github.io/software/api/repos/github/fabiorigamonti/bang"}, {"uid": "github/zpenoyre/OoT", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/OoT", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/OoT"}, {"uid": "github/zpenoyre/CausticFrog", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/CausticFrog", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/CausticFrog"}, {"uid": "github/agordon/fastx_toolkit", "html_url": "https://rseng.github.io/software/repository/github/agordon/fastx_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/agordon/fastx_toolkit"}, {"uid": "github/jpober/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/jpober/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/jpober/21cmSense"}, {"uid": "github/mlarichardson/CosmosCanvas", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/CosmosCanvas", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/CosmosCanvas"}, {"uid": "github/mlarichardson/ramses2hsim", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/ramses2hsim", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/ramses2hsim"}, {"uid": "github/RitchieLab/hudson", "html_url": "https://rseng.github.io/software/repository/github/RitchieLab/hudson", "api_url": "https://rseng.github.io/software/api/repos/github/RitchieLab/hudson"}, {"uid": "github/jacobblum/simDRIFT", "html_url": "https://rseng.github.io/software/repository/github/jacobblum/simDRIFT", "api_url": "https://rseng.github.io/software/api/repos/github/jacobblum/simDRIFT"}, {"uid": "github/carlacupcake/hashin_shtrikman_mp", "html_url": "https://rseng.github.io/software/repository/github/carlacupcake/hashin_shtrikman_mp", "api_url": "https://rseng.github.io/software/api/repos/github/carlacupcake/hashin_shtrikman_mp"}, {"uid": "github/DavidLapous/multipers", "html_url": "https://rseng.github.io/software/repository/github/DavidLapous/multipers", "api_url": "https://rseng.github.io/software/api/repos/github/DavidLapous/multipers"}, {"uid": "github/BrianAronson/birankr", "html_url": "https://rseng.github.io/software/repository/github/BrianAronson/birankr", "api_url": "https://rseng.github.io/software/api/repos/github/BrianAronson/birankr"}, {"uid": "github/mingzehuang/latentcor", "html_url": "https://rseng.github.io/software/repository/github/mingzehuang/latentcor", "api_url": "https://rseng.github.io/software/api/repos/github/mingzehuang/latentcor"}, {"uid": "github/kircherlab/cfDNA-UniFlow", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/cfDNA-UniFlow", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/cfDNA-UniFlow"}, {"uid": "github/kircherlab/ReMM", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/ReMM", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/ReMM"}, {"uid": "github/dirmeier/surjectors", "html_url": "https://rseng.github.io/software/repository/github/dirmeier/surjectors", "api_url": "https://rseng.github.io/software/api/repos/github/dirmeier/surjectors"}, {"uid": "github/sirocco-rt/sirocco", "html_url": "https://rseng.github.io/software/repository/github/sirocco-rt/sirocco", "api_url": "https://rseng.github.io/software/api/repos/github/sirocco-rt/sirocco"}, {"uid": "github/Hoecker-Lab/atligator", "html_url": "https://rseng.github.io/software/repository/github/Hoecker-Lab/atligator", "api_url": "https://rseng.github.io/software/api/repos/github/Hoecker-Lab/atligator"}, {"uid": "github/debian-tex/texlive-nonbin", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/texlive-nonbin", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/texlive-nonbin"}, {"uid": "github/debian-tex/biber", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/biber", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/biber"}, {"uid": "github/opencollab/arpack-ng", "html_url": "https://rseng.github.io/software/repository/github/opencollab/arpack-ng", "api_url": "https://rseng.github.io/software/api/repos/github/opencollab/arpack-ng"}, {"uid": "github/radio1988/OneStopRNAseq", "html_url": "https://rseng.github.io/software/repository/github/radio1988/OneStopRNAseq", "api_url": "https://rseng.github.io/software/api/repos/github/radio1988/OneStopRNAseq"}, {"uid": "github/oschwengers/platon", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/platon", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/platon"}, {"uid": "github/oschwengers/referenceseeker", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/referenceseeker", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/referenceseeker"}, {"uid": "github/oschwengers/bakta", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/bakta", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/bakta"}, {"uid": "github/ratt-ru/breizorro", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/breizorro", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/breizorro"}, {"uid": "github/ratt-ru/rodrigues", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/rodrigues", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/rodrigues"}, {"uid": "github/ratt-ru/PyMORESANE", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/PyMORESANE", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/PyMORESANE"}, {"uid": "github/ratt-ru/CubiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/CubiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/CubiCal"}, {"uid": "github/ratt-ru/montblanc", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/montblanc", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/montblanc"}, {"uid": "github/ratt-ru/solarkat", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/solarkat", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/solarkat"}, {"uid": "github/ratt-ru/Stimela", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela"}, {"uid": "github/ratt-ru/smops", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/smops", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/smops"}, {"uid": "github/ratt-ru/eidos", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/eidos", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/eidos"}, {"uid": "github/ratt-ru/Stimela-classic", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela-classic", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela-classic"}, {"uid": "github/ratt-ru/codex-africanus", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/codex-africanus", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/codex-africanus"}, {"uid": "github/ratt-ru/QuartiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/QuartiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/QuartiCal"}, {"uid": "github/ratt-ru/dask-ms", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/dask-ms", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/dask-ms"}, {"uid": "github/keckert7/codes", "html_url": "https://rseng.github.io/software/repository/github/keckert7/codes", "api_url": "https://rseng.github.io/software/api/repos/github/keckert7/codes"}, {"uid": "github/JMLascar/SUSHI", "html_url": "https://rseng.github.io/software/repository/github/JMLascar/SUSHI", "api_url": "https://rseng.github.io/software/api/repos/github/JMLascar/SUSHI"}, {"uid": "github/Keck-DataReductionPipelines/KcwiDRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KcwiDRP"}, {"uid": "github/Keck-DataReductionPipelines/KCWI_DRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KCWI_DRP"}, {"uid": "github/ExoCTK/exoctk", "html_url": "https://rseng.github.io/software/repository/github/ExoCTK/exoctk", "api_url": "https://rseng.github.io/software/api/repos/github/ExoCTK/exoctk"}, {"uid": "github/MatthijsHak/MetalDock", "html_url": "https://rseng.github.io/software/repository/github/MatthijsHak/MetalDock", "api_url": "https://rseng.github.io/software/api/repos/github/MatthijsHak/MetalDock"}, {"uid": "github/constantAmateur/SoupX", "html_url": "https://rseng.github.io/software/repository/github/constantAmateur/SoupX", "api_url": "https://rseng.github.io/software/api/repos/github/constantAmateur/SoupX"}, {"uid": "github/amoradinejad/limHaloPT", "html_url": "https://rseng.github.io/software/repository/github/amoradinejad/limHaloPT", "api_url": "https://rseng.github.io/software/api/repos/github/amoradinejad/limHaloPT"}, {"uid": "github/MIC-DKFZ/TractSeg", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/TractSeg", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/TractSeg"}, {"uid": "github/MIC-DKFZ/HD-BET", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/HD-BET", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/HD-BET"}, {"uid": "github/chainsawriot/oolong", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/oolong", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/oolong"}, {"uid": "github/chainsawriot/sweater", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/sweater", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/sweater"}, {"uid": "github/trixi-framework/TrixiParticles.jl", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/TrixiParticles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/TrixiParticles.jl"}, {"uid": "github/trixi-framework/HOHQMesh", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/HOHQMesh", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/HOHQMesh"}, {"uid": "github/bancaditalia/black-it", "html_url": "https://rseng.github.io/software/repository/github/bancaditalia/black-it", "api_url": "https://rseng.github.io/software/api/repos/github/bancaditalia/black-it"}, {"uid": "github/ComputationalBiomechanicsLab/opensim-creator", "html_url": "https://rseng.github.io/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalBiomechanicsLab/opensim-creator"}, {"uid": "github/logological/gpp", "html_url": "https://rseng.github.io/software/repository/github/logological/gpp", "api_url": "https://rseng.github.io/software/api/repos/github/logological/gpp"}, {"uid": "github/ropenscilabs/allcontributors", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/allcontributors", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/allcontributors"}, {"uid": "github/ropenscilabs/r2readthedocs", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/r2readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/r2readthedocs"}, {"uid": "github/ropenscilabs/gendercoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/gendercoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/gendercoder"}, {"uid": "github/ropenscilabs/qcoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/qcoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/qcoder"}, {"uid": "github/dipangwvu/SPEGID", "html_url": "https://rseng.github.io/software/repository/github/dipangwvu/SPEGID", "api_url": "https://rseng.github.io/software/api/repos/github/dipangwvu/SPEGID"}, {"uid": "github/sahasuparna/DeMoS", "html_url": "https://rseng.github.io/software/repository/github/sahasuparna/DeMoS", "api_url": "https://rseng.github.io/software/api/repos/github/sahasuparna/DeMoS"}, {"uid": "github/Astroua/TurbuStat", "html_url": "https://rseng.github.io/software/repository/github/Astroua/TurbuStat", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/TurbuStat"}, {"uid": "github/Astroua/SCIMES", "html_url": "https://rseng.github.io/software/repository/github/Astroua/SCIMES", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/SCIMES"}, {"uid": "github/spjuhel/BoARIO", "html_url": "https://rseng.github.io/software/repository/github/spjuhel/BoARIO", "api_url": "https://rseng.github.io/software/api/repos/github/spjuhel/BoARIO"}, {"uid": "github/nanoporetech/ont_fast5_api", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/ont_fast5_api", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/ont_fast5_api"}, {"uid": "github/nanoporetech/flappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/flappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/flappie"}, {"uid": "github/nanoporetech/dorado", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/dorado", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/dorado"}, {"uid": "github/nanoporetech/pomoxis", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pomoxis", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pomoxis"}, {"uid": "github/nanoporetech/pinfish", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pinfish", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pinfish"}, {"uid": "github/nanoporetech/index.html#", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/index.html#", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/index.html#"}, {"uid": "github/nanoporetech/pychopper", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pychopper", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pychopper"}, {"uid": "github/nanoporetech/megalodon", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/megalodon", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/megalodon"}, {"uid": "github/nanoporetech/tombo", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/tombo", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/tombo"}, {"uid": "github/nanoporetech/medaka", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/medaka", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/medaka"}, {"uid": "github/nanoporetech/qcat", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/qcat", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/qcat"}, {"uid": "github/nanoporetech/scrappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/scrappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/scrappie"}, {"uid": "github/eEcoLiDAR/laserchicken", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/laserchicken", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/laserchicken"}, {"uid": "github/eEcoLiDAR/Laserfarm", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/Laserfarm", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/Laserfarm"}, {"uid": "github/mkenworthy/exorings", "html_url": "https://rseng.github.io/software/repository/github/mkenworthy/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/mkenworthy/exorings"}, {"uid": "github/tobiasrausch/alfred", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/alfred", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/alfred"}, {"uid": "github/tobiasrausch/lorax", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/lorax", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/lorax"}, {"uid": "github/tobiasrausch/wally", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/wally", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/wally"}, {"uid": "github/hpdps-group/SolarZip", "html_url": "https://rseng.github.io/software/repository/github/hpdps-group/SolarZip", "api_url": "https://rseng.github.io/software/api/repos/github/hpdps-group/SolarZip"}, {"uid": "github/finagle29/DBSP_DRP", "html_url": "https://rseng.github.io/software/repository/github/finagle29/DBSP_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/finagle29/DBSP_DRP"}, {"uid": "github/CornellLabofOrnithology/auk", "html_url": "https://rseng.github.io/software/repository/github/CornellLabofOrnithology/auk", "api_url": "https://rseng.github.io/software/api/repos/github/CornellLabofOrnithology/auk"}, {"uid": "github/MelanieKahl/MechAnalyze", "html_url": "https://rseng.github.io/software/repository/github/MelanieKahl/MechAnalyze", "api_url": "https://rseng.github.io/software/api/repos/github/MelanieKahl/MechAnalyze"}, {"uid": "github/alphaparrot/ExoPlaSim", "html_url": "https://rseng.github.io/software/repository/github/alphaparrot/ExoPlaSim", "api_url": "https://rseng.github.io/software/api/repos/github/alphaparrot/ExoPlaSim"}, {"uid": "github/tinglabs/scAIDE", "html_url": "https://rseng.github.io/software/repository/github/tinglabs/scAIDE", "api_url": "https://rseng.github.io/software/api/repos/github/tinglabs/scAIDE"}, {"uid": "github/nextflow-io/nextflow", "html_url": "https://rseng.github.io/software/repository/github/nextflow-io/nextflow", "api_url": "https://rseng.github.io/software/api/repos/github/nextflow-io/nextflow"}, {"uid": "github/mrilikecoding/StreamPoseML", "html_url": "https://rseng.github.io/software/repository/github/mrilikecoding/StreamPoseML", "api_url": "https://rseng.github.io/software/api/repos/github/mrilikecoding/StreamPoseML"}, {"uid": "github/vocalpy/crowsetta", "html_url": "https://rseng.github.io/software/repository/github/vocalpy/crowsetta", "api_url": "https://rseng.github.io/software/api/repos/github/vocalpy/crowsetta"}, {"uid": "github/simpeg/aurora", "html_url": "https://rseng.github.io/software/repository/github/simpeg/aurora", "api_url": "https://rseng.github.io/software/api/repos/github/simpeg/aurora"}, {"uid": "github/highamm/sptotal", "html_url": "https://rseng.github.io/software/repository/github/highamm/sptotal", "api_url": "https://rseng.github.io/software/api/repos/github/highamm/sptotal"}, {"uid": "github/samhforbes/PupillometryR", "html_url": "https://rseng.github.io/software/repository/github/samhforbes/PupillometryR", "api_url": "https://rseng.github.io/software/api/repos/github/samhforbes/PupillometryR"}, {"uid": "github/JustinYKC/FEPOPS", "html_url": "https://rseng.github.io/software/repository/github/JustinYKC/FEPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/JustinYKC/FEPOPS"}, {"uid": "github/optimusmoose/jsms", "html_url": "https://rseng.github.io/software/repository/github/optimusmoose/jsms", "api_url": "https://rseng.github.io/software/api/repos/github/optimusmoose/jsms"}, {"uid": "github/madupite/madupite", "html_url": "https://rseng.github.io/software/repository/github/madupite/madupite", "api_url": "https://rseng.github.io/software/api/repos/github/madupite/madupite"}, {"uid": "github/kitokamada/QUIDS", "html_url": "https://rseng.github.io/software/repository/github/kitokamada/QUIDS", "api_url": "https://rseng.github.io/software/api/repos/github/kitokamada/QUIDS"}, {"uid": "github/pytoolz/toolz", "html_url": "https://rseng.github.io/software/repository/github/pytoolz/toolz", "api_url": "https://rseng.github.io/software/api/repos/github/pytoolz/toolz"}, {"uid": "github/BobAubouin/Python_Anesthesia_Simulator", "html_url": "https://rseng.github.io/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/BobAubouin/Python_Anesthesia_Simulator"}, {"uid": "github/rhenkin/visxhclust", "html_url": "https://rseng.github.io/software/repository/github/rhenkin/visxhclust", "api_url": "https://rseng.github.io/software/api/repos/github/rhenkin/visxhclust"}, {"uid": "github/optuna/optuna", "html_url": "https://rseng.github.io/software/repository/github/optuna/optuna", "api_url": "https://rseng.github.io/software/api/repos/github/optuna/optuna"}, {"uid": "github/egonw/bacting", "html_url": "https://rseng.github.io/software/repository/github/egonw/bacting", "api_url": "https://rseng.github.io/software/api/repos/github/egonw/bacting"}, {"uid": "github/ziotom78/libpolycomp", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/libpolycomp", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/libpolycomp"}, {"uid": "github/ziotom78/dacapo_calibration", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/dacapo_calibration", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/dacapo_calibration"}, {"uid": "github/ziotom78/Healpix.jl", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/Healpix.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/Healpix.jl"}, {"uid": "github/eelregit/covdisc", "html_url": "https://rseng.github.io/software/repository/github/eelregit/covdisc", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/covdisc"}, {"uid": "github/eelregit/mcfit", "html_url": "https://rseng.github.io/software/repository/github/eelregit/mcfit", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/mcfit"}, {"uid": "github/eelregit/pmwd", "html_url": "https://rseng.github.io/software/repository/github/eelregit/pmwd", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/pmwd"}, {"uid": "github/pfaucon/PBSIM-PacBio-Simulator", "html_url": "https://rseng.github.io/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/pfaucon/PBSIM-PacBio-Simulator"}, {"uid": "github/JulienPeloton/lenscov", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/lenscov", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/lenscov"}, {"uid": "github/JulienPeloton/s4cmb", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/s4cmb", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/s4cmb"}, {"uid": "github/mraveri/tensiometer", "html_url": "https://rseng.github.io/software/repository/github/mraveri/tensiometer", "api_url": "https://rseng.github.io/software/api/repos/github/mraveri/tensiometer"}, {"uid": "github/mggg/ecological-inference", "html_url": "https://rseng.github.io/software/repository/github/mggg/ecological-inference", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/ecological-inference"}, {"uid": "github/mggg/votekit", "html_url": "https://rseng.github.io/software/repository/github/mggg/votekit", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/votekit"}, {"uid": "github/mlegr/EqualISER", "html_url": "https://rseng.github.io/software/repository/github/mlegr/EqualISER", "api_url": "https://rseng.github.io/software/api/repos/github/mlegr/EqualISER"}, {"uid": "github/damar-wicaksono/uqtestfuns", "html_url": "https://rseng.github.io/software/repository/github/damar-wicaksono/uqtestfuns", "api_url": "https://rseng.github.io/software/api/repos/github/damar-wicaksono/uqtestfuns"}, {"uid": "github/johnpaulett/python-hl7", "html_url": "https://rseng.github.io/software/repository/github/johnpaulett/python-hl7", "api_url": "https://rseng.github.io/software/api/repos/github/johnpaulett/python-hl7"}, {"uid": "github/BonsonW/slow5curl", "html_url": "https://rseng.github.io/software/repository/github/BonsonW/slow5curl", "api_url": "https://rseng.github.io/software/api/repos/github/BonsonW/slow5curl"}, {"uid": "github/ejsafron/SATCHEL", "html_url": "https://rseng.github.io/software/repository/github/ejsafron/SATCHEL", "api_url": "https://rseng.github.io/software/api/repos/github/ejsafron/SATCHEL"}, {"uid": "github/guillochon/MOSFiT", "html_url": "https://rseng.github.io/software/repository/github/guillochon/MOSFiT", "api_url": "https://rseng.github.io/software/api/repos/github/guillochon/MOSFiT"}, {"uid": "github/pierrebarbera/epa-ng", "html_url": "https://rseng.github.io/software/repository/github/pierrebarbera/epa-ng", "api_url": "https://rseng.github.io/software/api/repos/github/pierrebarbera/epa-ng"}, {"uid": "github/ArtRand/signalAlign", "html_url": "https://rseng.github.io/software/repository/github/ArtRand/signalAlign", "api_url": "https://rseng.github.io/software/api/repos/github/ArtRand/signalAlign"}, {"uid": "github/ntoles/tristan-mp-pitp", "html_url": "https://rseng.github.io/software/repository/github/ntoles/tristan-mp-pitp", "api_url": "https://rseng.github.io/software/api/repos/github/ntoles/tristan-mp-pitp"}, {"uid": "github/ECP-copa/Cabana", "html_url": "https://rseng.github.io/software/repository/github/ECP-copa/Cabana", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-copa/Cabana"}, {"uid": "github/CLARIAH/grlc", "html_url": "https://rseng.github.io/software/repository/github/CLARIAH/grlc", "api_url": "https://rseng.github.io/software/api/repos/github/CLARIAH/grlc"}, {"uid": "github/AgatheSenellart/MultiVae", "html_url": "https://rseng.github.io/software/repository/github/AgatheSenellart/MultiVae", "api_url": "https://rseng.github.io/software/api/repos/github/AgatheSenellart/MultiVae"}, {"uid": "github/kingyin3613/RingsPy", "html_url": "https://rseng.github.io/software/repository/github/kingyin3613/RingsPy", "api_url": "https://rseng.github.io/software/api/repos/github/kingyin3613/RingsPy"}, {"uid": "github/MolMeDB/MolMeDB", "html_url": "https://rseng.github.io/software/repository/github/MolMeDB/MolMeDB", "api_url": "https://rseng.github.io/software/api/repos/github/MolMeDB/MolMeDB"}, {"uid": "github/wangjun1996/VisFeature", "html_url": "https://rseng.github.io/software/repository/github/wangjun1996/VisFeature", "api_url": "https://rseng.github.io/software/api/repos/github/wangjun1996/VisFeature"}, {"uid": "github/cjtu/craterpy", "html_url": "https://rseng.github.io/software/repository/github/cjtu/craterpy", "api_url": "https://rseng.github.io/software/api/repos/github/cjtu/craterpy"}, {"uid": "github/rformassspectrometry/SpectriPy", "html_url": "https://rseng.github.io/software/repository/github/rformassspectrometry/SpectriPy", "api_url": "https://rseng.github.io/software/api/repos/github/rformassspectrometry/SpectriPy"}, {"uid": "github/ulebreui/shark", "html_url": "https://rseng.github.io/software/repository/github/ulebreui/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ulebreui/shark"}, {"uid": "github/mihanke/athos", "html_url": "https://rseng.github.io/software/repository/github/mihanke/athos", "api_url": "https://rseng.github.io/software/api/repos/github/mihanke/athos"}, {"uid": "github/bxia888/CEFCIG", "html_url": "https://rseng.github.io/software/repository/github/bxia888/CEFCIG", "api_url": "https://rseng.github.io/software/api/repos/github/bxia888/CEFCIG"}, {"uid": "github/mrtommyb/ktransit", "html_url": "https://rseng.github.io/software/repository/github/mrtommyb/ktransit", "api_url": "https://rseng.github.io/software/api/repos/github/mrtommyb/ktransit"}, {"uid": "github/remi-adam/minot", "html_url": "https://rseng.github.io/software/repository/github/remi-adam/minot", "api_url": "https://rseng.github.io/software/api/repos/github/remi-adam/minot"}, {"uid": "github/SISPO-developers/sispo", "html_url": "https://rseng.github.io/software/repository/github/SISPO-developers/sispo", "api_url": "https://rseng.github.io/software/api/repos/github/SISPO-developers/sispo"}, {"uid": "github/rkkuang/triplelens", "html_url": "https://rseng.github.io/software/repository/github/rkkuang/triplelens", "api_url": "https://rseng.github.io/software/api/repos/github/rkkuang/triplelens"}, {"uid": "github/deepsphere/deepsphere-cosmo-tf1", "html_url": "https://rseng.github.io/software/repository/github/deepsphere/deepsphere-cosmo-tf1", "api_url": "https://rseng.github.io/software/api/repos/github/deepsphere/deepsphere-cosmo-tf1"}, {"uid": "github/austinpeel/herculens", "html_url": "https://rseng.github.io/software/repository/github/austinpeel/herculens", "api_url": "https://rseng.github.io/software/api/repos/github/austinpeel/herculens"}, {"uid": "github/bcbio/bcbio-nextgen", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio-nextgen", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio-nextgen"}, {"uid": "github/bcbio/bcbio.variation.recall", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio.variation.recall", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio.variation.recall"}, {"uid": "github/jsh58/Genrich", "html_url": "https://rseng.github.io/software/repository/github/jsh58/Genrich", "api_url": "https://rseng.github.io/software/api/repos/github/jsh58/Genrich"}, {"uid": "github/RandyRDavila/GraphCalc", "html_url": "https://rseng.github.io/software/repository/github/RandyRDavila/GraphCalc", "api_url": "https://rseng.github.io/software/api/repos/github/RandyRDavila/GraphCalc"}, {"uid": "github/rahil-makadia/grss", "html_url": "https://rseng.github.io/software/repository/github/rahil-makadia/grss", "api_url": "https://rseng.github.io/software/api/repos/github/rahil-makadia/grss"}, {"uid": "github/cdslaborg/paramonte", "html_url": "https://rseng.github.io/software/repository/github/cdslaborg/paramonte", "api_url": "https://rseng.github.io/software/api/repos/github/cdslaborg/paramonte"}, {"uid": "github/AMReX-Combustion/PeleLMeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Combustion/PeleLMeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Combustion/PeleLMeX"}, {"uid": "github/traja-team/traja", "html_url": "https://rseng.github.io/software/repository/github/traja-team/traja", "api_url": "https://rseng.github.io/software/api/repos/github/traja-team/traja"}, {"uid": "github/PyDL/cat-puma", "html_url": "https://rseng.github.io/software/repository/github/PyDL/cat-puma", "api_url": "https://rseng.github.io/software/api/repos/github/PyDL/cat-puma"}, {"uid": "github/dparkins/CosmoNest", "html_url": "https://rseng.github.io/software/repository/github/dparkins/CosmoNest", "api_url": "https://rseng.github.io/software/api/repos/github/dparkins/CosmoNest"}, {"uid": "github/sbird/fake_spectra", "html_url": "https://rseng.github.io/software/repository/github/sbird/fake_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/fake_spectra"}, {"uid": "github/sbird/GenPK", "html_url": "https://rseng.github.io/software/repository/github/sbird/GenPK", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/GenPK"}, {"uid": "github/emrecdem/emo-spectre", "html_url": "https://rseng.github.io/software/repository/github/emrecdem/emo-spectre", "api_url": "https://rseng.github.io/software/api/repos/github/emrecdem/emo-spectre"}, {"uid": "github/MikeSWang/Triumvirate", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Triumvirate", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Triumvirate"}, {"uid": "github/MikeSWang/Harmonia", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Harmonia", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Harmonia"}, {"uid": "github/MikeSWang/HorizonGRound", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/HorizonGRound", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/HorizonGRound"}, {"uid": "github/martinsparre/XSHPipelineManager", "html_url": "https://rseng.github.io/software/repository/github/martinsparre/XSHPipelineManager", "api_url": "https://rseng.github.io/software/api/repos/github/martinsparre/XSHPipelineManager"}, {"uid": "github/biboyd/SALSA", "html_url": "https://rseng.github.io/software/repository/github/biboyd/SALSA", "api_url": "https://rseng.github.io/software/api/repos/github/biboyd/SALSA"}, {"uid": "github/barricklab/pLannotate", "html_url": "https://rseng.github.io/software/repository/github/barricklab/pLannotate", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/pLannotate"}, {"uid": "github/barricklab/seabreeze", "html_url": "https://rseng.github.io/software/repository/github/barricklab/seabreeze", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/seabreeze"}, {"uid": "github/JuliaSmoothOptimizers/DCISolver.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/DCISolver.jl"}, {"uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/PDENLPModels.jl"}, {"uid": "github/galaxyproject/ansible-tiaas2", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/ansible-tiaas2", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/ansible-tiaas2"}, {"uid": "github/galaxyproject/galaxy-lib", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/galaxy-lib", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/galaxy-lib"}, {"uid": "github/KCL-BMEIS/NiftySeg", "html_url": "https://rseng.github.io/software/repository/github/KCL-BMEIS/NiftySeg", "api_url": "https://rseng.github.io/software/api/repos/github/KCL-BMEIS/NiftySeg"}, {"uid": "github/QCUncertainty/sigma", "html_url": "https://rseng.github.io/software/repository/github/QCUncertainty/sigma", "api_url": "https://rseng.github.io/software/api/repos/github/QCUncertainty/sigma"}, {"uid": "github/hamers/secularmultiple", "html_url": "https://rseng.github.io/software/repository/github/hamers/secularmultiple", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/secularmultiple"}, {"uid": "github/hamers/tpi", "html_url": "https://rseng.github.io/software/repository/github/hamers/tpi", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/tpi"}, {"uid": "github/churchmanlab/genewalk", "html_url": "https://rseng.github.io/software/repository/github/churchmanlab/genewalk", "api_url": "https://rseng.github.io/software/api/repos/github/churchmanlab/genewalk"}, {"uid": "github/KarrLab/de_sim", "html_url": "https://rseng.github.io/software/repository/github/KarrLab/de_sim", "api_url": "https://rseng.github.io/software/api/repos/github/KarrLab/de_sim"}, {"uid": "github/LoganAMorrison/Hazma", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/Hazma", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/Hazma"}, {"uid": "github/LoganAMorrison/blackthorn", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/blackthorn", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/blackthorn"}, {"uid": "github/steven-murray/powerbox", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/powerbox", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/powerbox"}, {"uid": "github/steven-murray/mrpy", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/mrpy", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/mrpy"}, {"uid": "github/steven-murray/pydftools", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/pydftools", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/pydftools"}, {"uid": "github/rust-bio/rust-bio-tools", "html_url": "https://rseng.github.io/software/repository/github/rust-bio/rust-bio-tools", "api_url": "https://rseng.github.io/software/api/repos/github/rust-bio/rust-bio-tools"}, {"uid": "github/SCIInstitute/UncertainSCI", "html_url": "https://rseng.github.io/software/repository/github/SCIInstitute/UncertainSCI", "api_url": "https://rseng.github.io/software/api/repos/github/SCIInstitute/UncertainSCI"}, {"uid": "github/eas342/tshirt", "html_url": "https://rseng.github.io/software/repository/github/eas342/tshirt", "api_url": "https://rseng.github.io/software/api/repos/github/eas342/tshirt"}, {"uid": "github/mzechmeister/serval", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/serval", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/serval"}, {"uid": "github/mzechmeister/viper", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/viper", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/viper"}, {"uid": "github/philbull/RadioFisher", "html_url": "https://rseng.github.io/software/repository/github/philbull/RadioFisher", "api_url": "https://rseng.github.io/software/api/repos/github/philbull/RadioFisher"}, {"uid": "github/brunettsp/myosothes", "html_url": "https://rseng.github.io/software/repository/github/brunettsp/myosothes", "api_url": "https://rseng.github.io/software/api/repos/github/brunettsp/myosothes"}, {"uid": "github/mwoodbri/MRIdb", "html_url": "https://rseng.github.io/software/repository/github/mwoodbri/MRIdb", "api_url": "https://rseng.github.io/software/api/repos/github/mwoodbri/MRIdb"}, {"uid": "github/WatsonLab/MAGpy", "html_url": "https://rseng.github.io/software/repository/github/WatsonLab/MAGpy", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonLab/MAGpy"}, {"uid": "github/jobovy/stream-stream", "html_url": "https://rseng.github.io/software/repository/github/jobovy/stream-stream", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/stream-stream"}, {"uid": "github/jobovy/streamgap-pepper", "html_url": "https://rseng.github.io/software/repository/github/jobovy/streamgap-pepper", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/streamgap-pepper"}, {"uid": "github/jobovy/apogee", "html_url": "https://rseng.github.io/software/repository/github/jobovy/apogee", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/apogee"}, {"uid": "github/jobovy/segueSelect", "html_url": "https://rseng.github.io/software/repository/github/jobovy/segueSelect", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/segueSelect"}, {"uid": "github/jobovy/simple-m2m", "html_url": "https://rseng.github.io/software/repository/github/jobovy/simple-m2m", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/simple-m2m"}, {"uid": "github/jobovy/galpy", "html_url": "https://rseng.github.io/software/repository/github/jobovy/galpy", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/galpy"}, {"uid": "github/jobovy/gaia_tools", "html_url": "https://rseng.github.io/software/repository/github/jobovy/gaia_tools", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/gaia_tools"}, {"uid": "github/jobovy/extreme-deconvolution", "html_url": "https://rseng.github.io/software/repository/github/jobovy/extreme-deconvolution", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/extreme-deconvolution"}, {"uid": "github/TommasoRonconi/scampy", "html_url": "https://rseng.github.io/software/repository/github/TommasoRonconi/scampy", "api_url": "https://rseng.github.io/software/api/repos/github/TommasoRonconi/scampy"}, {"uid": "github/astroCV/astroCV", "html_url": "https://rseng.github.io/software/repository/github/astroCV/astroCV", "api_url": "https://rseng.github.io/software/api/repos/github/astroCV/astroCV"}, {"uid": "github/idaholab/moose", "html_url": "https://rseng.github.io/software/repository/github/idaholab/moose", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/moose"}, {"uid": "github/idaholab/MontePy", "html_url": "https://rseng.github.io/software/repository/github/idaholab/MontePy", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/MontePy"}, {"uid": "github/extendr/extendr", "html_url": "https://rseng.github.io/software/repository/github/extendr/extendr", "api_url": "https://rseng.github.io/software/api/repos/github/extendr/extendr"}, {"uid": "github/UFParLab/aces4", "html_url": "https://rseng.github.io/software/repository/github/UFParLab/aces4", "api_url": "https://rseng.github.io/software/api/repos/github/UFParLab/aces4"}, {"uid": "github/CEED/libCEED", "html_url": "https://rseng.github.io/software/repository/github/CEED/libCEED", "api_url": "https://rseng.github.io/software/api/repos/github/CEED/libCEED"}, {"uid": "github/landlab/landlab", "html_url": "https://rseng.github.io/software/repository/github/landlab/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/landlab/landlab"}, {"uid": "github/hnikaein/stark", "html_url": "https://rseng.github.io/software/repository/github/hnikaein/stark", "api_url": "https://rseng.github.io/software/api/repos/github/hnikaein/stark"}, {"uid": "github/grant-m-s/astronomicAL", "html_url": "https://rseng.github.io/software/repository/github/grant-m-s/astronomicAL", "api_url": "https://rseng.github.io/software/api/repos/github/grant-m-s/astronomicAL"}, {"uid": "github/johnlee4/CoCoCoNet", "html_url": "https://rseng.github.io/software/repository/github/johnlee4/CoCoCoNet", "api_url": "https://rseng.github.io/software/api/repos/github/johnlee4/CoCoCoNet"}, {"uid": "github/zdelrosario/py_grama", "html_url": "https://rseng.github.io/software/repository/github/zdelrosario/py_grama", "api_url": "https://rseng.github.io/software/api/repos/github/zdelrosario/py_grama"}, {"uid": "github/ofionnad/radiowinds", "html_url": "https://rseng.github.io/software/repository/github/ofionnad/radiowinds", "api_url": "https://rseng.github.io/software/api/repos/github/ofionnad/radiowinds"}, {"uid": "github/glotzerlab/freud", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/freud", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/freud"}, {"uid": "github/glotzerlab/hoomd-blue", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/hoomd-blue", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/hoomd-blue"}, {"uid": "github/glotzerlab/coxeter", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/coxeter", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/coxeter"}, {"uid": "github/DLR-AMR/t8code", "html_url": "https://rseng.github.io/software/repository/github/DLR-AMR/t8code", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-AMR/t8code"}, {"uid": "github/mostanes/umbrella2", "html_url": "https://rseng.github.io/software/repository/github/mostanes/umbrella2", "api_url": "https://rseng.github.io/software/api/repos/github/mostanes/umbrella2"}, {"uid": "github/Jinsl-lab/SDImpute", "html_url": "https://rseng.github.io/software/repository/github/Jinsl-lab/SDImpute", "api_url": "https://rseng.github.io/software/api/repos/github/Jinsl-lab/SDImpute"}, {"uid": "github/UTEL-UIUC/gtfs_segments", "html_url": "https://rseng.github.io/software/repository/github/UTEL-UIUC/gtfs_segments", "api_url": "https://rseng.github.io/software/api/repos/github/UTEL-UIUC/gtfs_segments"}, {"uid": "github/cas-bioinf/rboAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/cas-bioinf/rboAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/cas-bioinf/rboAnalyzer"}, {"uid": "github/hemantaph/ler", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/ler", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/ler"}, {"uid": "github/hemantaph/gwsnr", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/gwsnr", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/gwsnr"}, {"uid": "github/DJArmstrong/TransitSOM", "html_url": "https://rseng.github.io/software/repository/github/DJArmstrong/TransitSOM", "api_url": "https://rseng.github.io/software/api/repos/github/DJArmstrong/TransitSOM"}, {"uid": "github/H-E-L-P/XID_plus", "html_url": "https://rseng.github.io/software/repository/github/H-E-L-P/XID_plus", "api_url": "https://rseng.github.io/software/api/repos/github/H-E-L-P/XID_plus"}, {"uid": "github/jpcoles/mosaic", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/mosaic"}, {"uid": "github/jpcoles/glass", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/glass", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/glass"}, {"uid": "github/DLR-RM/BlenderProc", "html_url": "https://rseng.github.io/software/repository/github/DLR-RM/BlenderProc", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-RM/BlenderProc"}, {"uid": "github/weizhouUMICH/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/weizhouUMICH/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/weizhouUMICH/SAIGE"}, {"uid": "github/jorgefz/photoevolver", "html_url": "https://rseng.github.io/software/repository/github/jorgefz/photoevolver", "api_url": "https://rseng.github.io/software/api/repos/github/jorgefz/photoevolver"}, {"uid": "github/lzx325/DeeReCT-APA-repo", "html_url": "https://rseng.github.io/software/repository/github/lzx325/DeeReCT-APA-repo", "api_url": "https://rseng.github.io/software/api/repos/github/lzx325/DeeReCT-APA-repo"}, {"uid": "github/kimberg/voxbo", "html_url": "https://rseng.github.io/software/repository/github/kimberg/voxbo", "api_url": "https://rseng.github.io/software/api/repos/github/kimberg/voxbo"}, {"uid": "github/GooglingTheCancerGenome/sv-gen", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-gen", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-gen"}, {"uid": "github/GooglingTheCancerGenome/sv-callers", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-callers", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-callers"}, {"uid": "github/GooglingTheCancerGenome/sv-channels", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-channels", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-channels"}, {"uid": "github/fuyw-aisw/GALA", "html_url": "https://rseng.github.io/software/repository/github/fuyw-aisw/GALA", "api_url": "https://rseng.github.io/software/api/repos/github/fuyw-aisw/GALA"}, {"uid": "github/NETL-RIC/URC-Assessment-Method", "html_url": "https://rseng.github.io/software/repository/github/NETL-RIC/URC-Assessment-Method", "api_url": "https://rseng.github.io/software/api/repos/github/NETL-RIC/URC-Assessment-Method"}, {"uid": "github/T0ngChen/medRCT", "html_url": "https://rseng.github.io/software/repository/github/T0ngChen/medRCT", "api_url": "https://rseng.github.io/software/api/repos/github/T0ngChen/medRCT"}, {"uid": "github/VBlesius/RHRT", "html_url": "https://rseng.github.io/software/repository/github/VBlesius/RHRT", "api_url": "https://rseng.github.io/software/api/repos/github/VBlesius/RHRT"}, {"uid": "github/yogi-tud/space_gpu", "html_url": "https://rseng.github.io/software/repository/github/yogi-tud/space_gpu", "api_url": "https://rseng.github.io/software/api/repos/github/yogi-tud/space_gpu"}, {"uid": "github/mkargo/pipeline", "html_url": "https://rseng.github.io/software/repository/github/mkargo/pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mkargo/pipeline"}, {"uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", "html_url": "https://rseng.github.io/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/IlianPihlajamaa/ModeCouplingTheory.jl"}, {"uid": "github/21cmFAST/21cmFAST", "html_url": "https://rseng.github.io/software/repository/github/21cmFAST/21cmFAST", "api_url": "https://rseng.github.io/software/api/repos/github/21cmFAST/21cmFAST"}, {"uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "html_url": "https://rseng.github.io/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner"}, {"uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/BC_Intrinsic_subtyping"}, {"uid": "github/DEIB-GECO/MutViz", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/MutViz", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/MutViz"}, {"uid": "github/DEIB-GECO/CRIS_single-sample", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CRIS_single-sample", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CRIS_single-sample"}, {"uid": "github/DEIB-GECO/GeneNetFusion", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/GeneNetFusion", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/GeneNetFusion"}, {"uid": "github/DEIB-GECO/flu-warning-system", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/flu-warning-system", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/flu-warning-system"}, {"uid": "github/DEIB-GECO/CombSAFE", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CombSAFE", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CombSAFE"}, {"uid": "github/DEIB-GECO/genereg", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/genereg", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/genereg"}, {"uid": "github/DEIB-GECO/ReRa", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/ReRa", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/ReRa"}, {"uid": "github/DEIB-GECO/VarSum", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/VarSum", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/VarSum"}, {"uid": "github/DEIB-GECO/OpenGDC", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/OpenGDC", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/OpenGDC"}, {"uid": "github/OPUS-MaLab/opus_fold3", "html_url": "https://rseng.github.io/software/repository/github/OPUS-MaLab/opus_fold3", "api_url": "https://rseng.github.io/software/api/repos/github/OPUS-MaLab/opus_fold3"}, {"uid": "github/DrJCarson/BoundedCoalescent", "html_url": "https://rseng.github.io/software/repository/github/DrJCarson/BoundedCoalescent", "api_url": "https://rseng.github.io/software/api/repos/github/DrJCarson/BoundedCoalescent"}, {"uid": "github/vanheeringen-lab/gimmemotifs", "html_url": "https://rseng.github.io/software/repository/github/vanheeringen-lab/gimmemotifs", "api_url": "https://rseng.github.io/software/api/repos/github/vanheeringen-lab/gimmemotifs"}, {"uid": "github/cmillion/gPhoton", "html_url": "https://rseng.github.io/software/repository/github/cmillion/gPhoton", "api_url": "https://rseng.github.io/software/api/repos/github/cmillion/gPhoton"}, {"uid": "github/Heldenkombinat/Logodetect", "html_url": "https://rseng.github.io/software/repository/github/Heldenkombinat/Logodetect", "api_url": "https://rseng.github.io/software/api/repos/github/Heldenkombinat/Logodetect"}, {"uid": "github/ferdymercury/amide", "html_url": "https://rseng.github.io/software/repository/github/ferdymercury/amide", "api_url": "https://rseng.github.io/software/api/repos/github/ferdymercury/amide"}, {"uid": "github/MeasureTransport/MParT", "html_url": "https://rseng.github.io/software/repository/github/MeasureTransport/MParT", "api_url": "https://rseng.github.io/software/api/repos/github/MeasureTransport/MParT"}, {"uid": "github/webbjj/clustertools", "html_url": "https://rseng.github.io/software/repository/github/webbjj/clustertools", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/clustertools"}, {"uid": "github/webbjj/m2mcluster", "html_url": "https://rseng.github.io/software/repository/github/webbjj/m2mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/m2mcluster"}, {"uid": "github/smeingast/PNICER", "html_url": "https://rseng.github.io/software/repository/github/smeingast/PNICER", "api_url": "https://rseng.github.io/software/api/repos/github/smeingast/PNICER"}, {"uid": "github/thomaswilliamsastro/mcfine", "html_url": "https://rseng.github.io/software/repository/github/thomaswilliamsastro/mcfine", "api_url": "https://rseng.github.io/software/api/repos/github/thomaswilliamsastro/mcfine"}, {"uid": "github/secastel/phaser", "html_url": "https://rseng.github.io/software/repository/github/secastel/phaser", "api_url": "https://rseng.github.io/software/api/repos/github/secastel/phaser"}, {"uid": "github/tornede/py_experimenter", "html_url": "https://rseng.github.io/software/repository/github/tornede/py_experimenter", "api_url": "https://rseng.github.io/software/api/repos/github/tornede/py_experimenter"}, {"uid": "github/rossjturner/RAiSERed", "html_url": "https://rseng.github.io/software/repository/github/rossjturner/RAiSERed", "api_url": "https://rseng.github.io/software/api/repos/github/rossjturner/RAiSERed"}, {"uid": "github/snakemake/snakemake", "html_url": "https://rseng.github.io/software/repository/github/snakemake/snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/snakemake/snakemake"}, {"uid": "github/grzeimann/Diagnose", "html_url": "https://rseng.github.io/software/repository/github/grzeimann/Diagnose", "api_url": "https://rseng.github.io/software/api/repos/github/grzeimann/Diagnose"}, {"uid": "github/barbagroup/geoclaw-landspill", "html_url": "https://rseng.github.io/software/repository/github/barbagroup/geoclaw-landspill", "api_url": "https://rseng.github.io/software/api/repos/github/barbagroup/geoclaw-landspill"}, {"uid": "github/vidakris/flatwrm", "html_url": "https://rseng.github.io/software/repository/github/vidakris/flatwrm", "api_url": "https://rseng.github.io/software/api/repos/github/vidakris/flatwrm"}, {"uid": "github/jmschrei/pomegranate", "html_url": "https://rseng.github.io/software/repository/github/jmschrei/pomegranate", "api_url": "https://rseng.github.io/software/api/repos/github/jmschrei/pomegranate"}, {"uid": "github/SHF-NAILResearchGroup/HINA", "html_url": "https://rseng.github.io/software/repository/github/SHF-NAILResearchGroup/HINA", "api_url": "https://rseng.github.io/software/api/repos/github/SHF-NAILResearchGroup/HINA"}, {"uid": "github/philippbaumeister/ExoMDN", "html_url": "https://rseng.github.io/software/repository/github/philippbaumeister/ExoMDN", "api_url": "https://rseng.github.io/software/api/repos/github/philippbaumeister/ExoMDN"}, {"uid": "github/cwentland0/perform", "html_url": "https://rseng.github.io/software/repository/github/cwentland0/perform", "api_url": "https://rseng.github.io/software/api/repos/github/cwentland0/perform"}, {"uid": "github/clauswilke/PeptideBuilder", "html_url": "https://rseng.github.io/software/repository/github/clauswilke/PeptideBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/clauswilke/PeptideBuilder"}, {"uid": "github/PabloVD/HAYASHI", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HAYASHI", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HAYASHI"}, {"uid": "github/PabloVD/CosmoGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/CosmoGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/CosmoGraphNet"}, {"uid": "github/PabloVD/21cmDeepLearning", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/21cmDeepLearning", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/21cmDeepLearning"}, {"uid": "github/PabloVD/HaloGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HaloGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HaloGraphNet"}, {"uid": "github/Substra/substra", "html_url": "https://rseng.github.io/software/repository/github/Substra/substra", "api_url": "https://rseng.github.io/software/api/repos/github/Substra/substra"}, {"uid": "github/nialov/fractopo", "html_url": "https://rseng.github.io/software/repository/github/nialov/fractopo", "api_url": "https://rseng.github.io/software/api/repos/github/nialov/fractopo"}, {"uid": "github/MIT-STARLab/deconfuser", "html_url": "https://rseng.github.io/software/repository/github/MIT-STARLab/deconfuser", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-STARLab/deconfuser"}, {"uid": "github/DTsuna/binary_precursor", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/binary_precursor", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/binary_precursor"}, {"uid": "github/DTsuna/CHIPS", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/CHIPS", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/CHIPS"}, {"uid": "github/sanger-pathogens/Roary", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Roary", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Roary"}, {"uid": "github/sanger-pathogens/ariba", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/ariba", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/ariba"}, {"uid": "github/sanger-pathogens/assembly-stats", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/assembly-stats", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/assembly-stats"}, {"uid": "github/sanger-pathogens/gubbins", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/gubbins", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/gubbins"}, {"uid": "github/sanger-pathogens/Fastaq", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Fastaq", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Fastaq"}, {"uid": "github/sanger-pathogens/Artemis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Artemis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Artemis"}, {"uid": "github/sanger-pathogens/snp-sites", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/snp-sites", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/snp-sites"}, {"uid": "github/sanger-pathogens/pymummer", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/pymummer", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/pymummer"}, {"uid": "github/sanger-pathogens/iva", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/iva", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/iva"}, {"uid": "github/sanger-pathogens/circlator", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/circlator", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/circlator"}, {"uid": "github/sanger-pathogens/Bio-Tradis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Bio-Tradis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Bio-Tradis"}, {"uid": "github/automl/amltk", "html_url": "https://rseng.github.io/software/repository/github/automl/amltk", "api_url": "https://rseng.github.io/software/api/repos/github/automl/amltk"}, {"uid": "github/prajwel/curvit", "html_url": "https://rseng.github.io/software/repository/github/prajwel/curvit", "api_url": "https://rseng.github.io/software/api/repos/github/prajwel/curvit"}, {"uid": "github/yyZhang14/dbEssLnc", "html_url": "https://rseng.github.io/software/repository/github/yyZhang14/dbEssLnc", "api_url": "https://rseng.github.io/software/api/repos/github/yyZhang14/dbEssLnc"}, {"uid": "github/virgesmith/neworder", "html_url": "https://rseng.github.io/software/repository/github/virgesmith/neworder", "api_url": "https://rseng.github.io/software/api/repos/github/virgesmith/neworder"}, {"uid": "github/cschreib/egg", "html_url": "https://rseng.github.io/software/repository/github/cschreib/egg", "api_url": "https://rseng.github.io/software/api/repos/github/cschreib/egg"}, {"uid": "github/SouthGreenPlatform/PyRice", "html_url": "https://rseng.github.io/software/repository/github/SouthGreenPlatform/PyRice", "api_url": "https://rseng.github.io/software/api/repos/github/SouthGreenPlatform/PyRice"}, {"uid": "github/tibordome/cosmic_profiles", "html_url": "https://rseng.github.io/software/repository/github/tibordome/cosmic_profiles", "api_url": "https://rseng.github.io/software/api/repos/github/tibordome/cosmic_profiles"}, {"uid": "github/nikhilroxtomar/FANet", "html_url": "https://rseng.github.io/software/repository/github/nikhilroxtomar/FANet", "api_url": "https://rseng.github.io/software/api/repos/github/nikhilroxtomar/FANet"}, {"uid": "github/adamantine-sim/adamantine", "html_url": "https://rseng.github.io/software/repository/github/adamantine-sim/adamantine", "api_url": "https://rseng.github.io/software/api/repos/github/adamantine-sim/adamantine"}, {"uid": "github/kadyb/rgugik", "html_url": "https://rseng.github.io/software/repository/github/kadyb/rgugik", "api_url": "https://rseng.github.io/software/api/repos/github/kadyb/rgugik"}, {"uid": "github/puregome/notebooks", "html_url": "https://rseng.github.io/software/repository/github/puregome/notebooks", "api_url": "https://rseng.github.io/software/api/repos/github/puregome/notebooks"}, {"uid": "github/thraraujo/pysymmpol", "html_url": "https://rseng.github.io/software/repository/github/thraraujo/pysymmpol", "api_url": "https://rseng.github.io/software/api/repos/github/thraraujo/pysymmpol"}, {"uid": "github/bencebeky/spotrod", "html_url": "https://rseng.github.io/software/repository/github/bencebeky/spotrod", "api_url": "https://rseng.github.io/software/api/repos/github/bencebeky/spotrod"}, {"uid": "github/kambrian/SubGen", "html_url": "https://rseng.github.io/software/repository/github/kambrian/SubGen", "api_url": "https://rseng.github.io/software/api/repos/github/kambrian/SubGen"}, {"uid": "github/joannegger/plaNETic", "html_url": "https://rseng.github.io/software/repository/github/joannegger/plaNETic", "api_url": "https://rseng.github.io/software/api/repos/github/joannegger/plaNETic"}, {"uid": "github/AgentM-GEG/residual_feature_extraction", "html_url": "https://rseng.github.io/software/repository/github/AgentM-GEG/residual_feature_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/AgentM-GEG/residual_feature_extraction"}, {"uid": "github/renecotyfanboy/jaxspec", "html_url": "https://rseng.github.io/software/repository/github/renecotyfanboy/jaxspec", "api_url": "https://rseng.github.io/software/api/repos/github/renecotyfanboy/jaxspec"}, {"uid": "github/jeffzhen/omnical", "html_url": "https://rseng.github.io/software/repository/github/jeffzhen/omnical", "api_url": "https://rseng.github.io/software/api/repos/github/jeffzhen/omnical"}, {"uid": "github/wvanzeist/riroriro", "html_url": "https://rseng.github.io/software/repository/github/wvanzeist/riroriro", "api_url": "https://rseng.github.io/software/api/repos/github/wvanzeist/riroriro"}, {"uid": "github/TRASAL/AMBER", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/AMBER"}, {"uid": "github/TRASAL/psrdada-python", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/psrdada-python", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/psrdada-python"}, {"uid": "github/andizq/sf3dmodels", "html_url": "https://rseng.github.io/software/repository/github/andizq/sf3dmodels", "api_url": "https://rseng.github.io/software/api/repos/github/andizq/sf3dmodels"}, {"uid": "github/abrupt-climate/hyper-canny", "html_url": "https://rseng.github.io/software/repository/github/abrupt-climate/hyper-canny", "api_url": "https://rseng.github.io/software/api/repos/github/abrupt-climate/hyper-canny"}, {"uid": "github/EOSC-LOFAR/lofar-ld", "html_url": "https://rseng.github.io/software/repository/github/EOSC-LOFAR/lofar-ld", "api_url": "https://rseng.github.io/software/api/repos/github/EOSC-LOFAR/lofar-ld"}, {"uid": "github/smillerc/CurvilinearGrids.jl", "html_url": "https://rseng.github.io/software/repository/github/smillerc/CurvilinearGrids.jl", "api_url": "https://rseng.github.io/software/api/repos/github/smillerc/CurvilinearGrids.jl"}, {"uid": "github/arnauqb/Qwind.jl", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/Qwind.jl", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/Qwind.jl"}, {"uid": "github/arnauqb/qwind", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/qwind", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/qwind"}, {"uid": "github/nci/scores", "html_url": "https://rseng.github.io/software/repository/github/nci/scores", "api_url": "https://rseng.github.io/software/api/repos/github/nci/scores"}, {"uid": "github/VChristiaens/special", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/special", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/special"}, {"uid": "github/VChristiaens/vcal_sphere", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/vcal_sphere", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/vcal_sphere"}, {"uid": "github/VChristiaens/MINDS", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/MINDS", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/MINDS"}, {"uid": "github/lightning-project/lightning", "html_url": "https://rseng.github.io/software/repository/github/lightning-project/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/lightning-project/lightning"}, {"uid": "github/jenniferlu717/Bracken", "html_url": "https://rseng.github.io/software/repository/github/jenniferlu717/Bracken", "api_url": "https://rseng.github.io/software/api/repos/github/jenniferlu717/Bracken"}, {"uid": "github/xinyiguan/py2lispIDyOM", "html_url": "https://rseng.github.io/software/repository/github/xinyiguan/py2lispIDyOM", "api_url": "https://rseng.github.io/software/api/repos/github/xinyiguan/py2lispIDyOM"}, {"uid": "github/blackjax-devs/blackjax", "html_url": "https://rseng.github.io/software/repository/github/blackjax-devs/blackjax", "api_url": "https://rseng.github.io/software/api/repos/github/blackjax-devs/blackjax"}, {"uid": "github/ankushaggarwal/pymecht", "html_url": "https://rseng.github.io/software/repository/github/ankushaggarwal/pymecht", "api_url": "https://rseng.github.io/software/api/repos/github/ankushaggarwal/pymecht"}, {"uid": "github/JakobRoche/OCSVM-Transit-Detection", "html_url": "https://rseng.github.io/software/repository/github/JakobRoche/OCSVM-Transit-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/JakobRoche/OCSVM-Transit-Detection"}, {"uid": "github/CrowdTruth/CrowdTruth", "html_url": "https://rseng.github.io/software/repository/github/CrowdTruth/CrowdTruth", "api_url": "https://rseng.github.io/software/api/repos/github/CrowdTruth/CrowdTruth"}, {"uid": "github/jonaselgammal/SIGWAY", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/SIGWAY", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/SIGWAY"}, {"uid": "github/jonaselgammal/GPry", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/GPry", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/GPry"}, {"uid": "github/Via-Appia/via-appia-online-viewer", "html_url": "https://rseng.github.io/software/repository/github/Via-Appia/via-appia-online-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/Via-Appia/via-appia-online-viewer"}, {"uid": "github/samirmartins/pydaq", "html_url": "https://rseng.github.io/software/repository/github/samirmartins/pydaq", "api_url": "https://rseng.github.io/software/api/repos/github/samirmartins/pydaq"}, {"uid": "github/TheJacksonLaboratory/drug-synergy", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/drug-synergy", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/drug-synergy"}, {"uid": "github/TheJacksonLaboratory/SvAnn", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/SvAnn", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/SvAnn"}, {"uid": "github/ColdThunder/NR-code", "html_url": "https://rseng.github.io/software/repository/github/ColdThunder/NR-code", "api_url": "https://rseng.github.io/software/api/repos/github/ColdThunder/NR-code"}, {"uid": "github/witseie/fpgaperm", "html_url": "https://rseng.github.io/software/repository/github/witseie/fpgaperm", "api_url": "https://rseng.github.io/software/api/repos/github/witseie/fpgaperm"}, {"uid": "github/uw-comphys/shapelets", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/shapelets", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/shapelets"}, {"uid": "github/uw-comphys/opencmp", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/opencmp", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/opencmp"}, {"uid": "github/uw-comphys/openccm", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/openccm", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/openccm"}, {"uid": "github/LucindaLilley/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/LucindaLilley/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/LucindaLilley/PIRATES"}, {"uid": "github/lammps/lammps", "html_url": "https://rseng.github.io/software/repository/github/lammps/lammps", "api_url": "https://rseng.github.io/software/api/repos/github/lammps/lammps"}, {"uid": "github/ZjuLiangsl/mmkp", "html_url": "https://rseng.github.io/software/repository/github/ZjuLiangsl/mmkp", "api_url": "https://rseng.github.io/software/api/repos/github/ZjuLiangsl/mmkp"}, {"uid": "github/DFKI-NI/syclops", "html_url": "https://rseng.github.io/software/repository/github/DFKI-NI/syclops", "api_url": "https://rseng.github.io/software/api/repos/github/DFKI-NI/syclops"}, {"uid": "github/jonathanHuwP/CrystalGrowthTracker", "html_url": "https://rseng.github.io/software/repository/github/jonathanHuwP/CrystalGrowthTracker", "api_url": "https://rseng.github.io/software/api/repos/github/jonathanHuwP/CrystalGrowthTracker"}, {"uid": "github/eisascience/HISTA", "html_url": "https://rseng.github.io/software/repository/github/eisascience/HISTA", "api_url": "https://rseng.github.io/software/api/repos/github/eisascience/HISTA"}, {"uid": "github/beastraban/INSANE", "html_url": "https://rseng.github.io/software/repository/github/beastraban/INSANE", "api_url": "https://rseng.github.io/software/api/repos/github/beastraban/INSANE"}, {"uid": "github/EMResearch/EvoMaster", "html_url": "https://rseng.github.io/software/repository/github/EMResearch/EvoMaster", "api_url": "https://rseng.github.io/software/api/repos/github/EMResearch/EvoMaster"}, {"uid": "github/navasmontilla/CAELUM", "html_url": "https://rseng.github.io/software/repository/github/navasmontilla/CAELUM", "api_url": "https://rseng.github.io/software/api/repos/github/navasmontilla/CAELUM"}, {"uid": "github/BioinformaticsPlatformWIV-ISP/PACU", "html_url": "https://rseng.github.io/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", "api_url": "https://rseng.github.io/software/api/repos/github/BioinformaticsPlatformWIV-ISP/PACU"}, {"uid": "github/TeamPerie/CellDestiny", "html_url": "https://rseng.github.io/software/repository/github/TeamPerie/CellDestiny", "api_url": "https://rseng.github.io/software/api/repos/github/TeamPerie/CellDestiny"}, {"uid": "github/artic-network/fieldbioinformatics", "html_url": "https://rseng.github.io/software/repository/github/artic-network/fieldbioinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/fieldbioinformatics"}, {"uid": "github/artic-network/readucks", "html_url": "https://rseng.github.io/software/repository/github/artic-network/readucks", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/readucks"}, {"uid": "github/CExA-project/ddc", "html_url": "https://rseng.github.io/software/repository/github/CExA-project/ddc", "api_url": "https://rseng.github.io/software/api/repos/github/CExA-project/ddc"}, {"uid": "github/mh-skjelvareid/synaptus", "html_url": "https://rseng.github.io/software/repository/github/mh-skjelvareid/synaptus", "api_url": "https://rseng.github.io/software/api/repos/github/mh-skjelvareid/synaptus"}, {"uid": "github/StevenGolovkine/FDApy", "html_url": "https://rseng.github.io/software/repository/github/StevenGolovkine/FDApy", "api_url": "https://rseng.github.io/software/api/repos/github/StevenGolovkine/FDApy"}, {"uid": "github/LauraHerold/pinc", "html_url": "https://rseng.github.io/software/repository/github/LauraHerold/pinc", "api_url": "https://rseng.github.io/software/api/repos/github/LauraHerold/pinc"}, {"uid": "github/TeraTrees/TIPP", "html_url": "https://rseng.github.io/software/repository/github/TeraTrees/TIPP", "api_url": "https://rseng.github.io/software/api/repos/github/TeraTrees/TIPP"}, {"uid": "github/achael/eht-imaging", "html_url": "https://rseng.github.io/software/repository/github/achael/eht-imaging", "api_url": "https://rseng.github.io/software/api/repos/github/achael/eht-imaging"}, {"uid": "github/CederGroupHub/smol", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/smol", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/smol"}, {"uid": "github/CederGroupHub/sparse-lm", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/sparse-lm", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/sparse-lm"}, {"uid": "github/evanhockings/QuantumACES.jl", "html_url": "https://rseng.github.io/software/repository/github/evanhockings/QuantumACES.jl", "api_url": "https://rseng.github.io/software/api/repos/github/evanhockings/QuantumACES.jl"}, {"uid": "github/XSLiuLab/Seq2Neo", "html_url": "https://rseng.github.io/software/repository/github/XSLiuLab/Seq2Neo", "api_url": "https://rseng.github.io/software/api/repos/github/XSLiuLab/Seq2Neo"}, {"uid": "github/gmbrandt/xwavecal", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/xwavecal", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/xwavecal"}, {"uid": "github/gmbrandt/HTOF", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/HTOF", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/HTOF"}, {"uid": "github/andersen-lab/ivar", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/ivar", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/ivar"}, {"uid": "github/andersen-lab/html", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/html", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/html"}, {"uid": "github/andersen-lab/Freyja", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/Freyja", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/Freyja"}, {"uid": "github/SPARTA-dev/SPARTA", "html_url": "https://rseng.github.io/software/repository/github/SPARTA-dev/SPARTA", "api_url": "https://rseng.github.io/software/api/repos/github/SPARTA-dev/SPARTA"}, {"uid": "github/Martindelosrios/ROGER", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/ROGER", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/ROGER"}, {"uid": "github/Martindelosrios/cosmic-kite", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/cosmic-kite", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/cosmic-kite"}, {"uid": "github/Martindelosrios/MeSsI", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/MeSsI", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/MeSsI"}, {"uid": "github/opengenomebrowser/opengenomebrowser", "html_url": "https://rseng.github.io/software/repository/github/opengenomebrowser/opengenomebrowser", "api_url": "https://rseng.github.io/software/api/repos/github/opengenomebrowser/opengenomebrowser"}, {"uid": "github/chrishales/pieflag", "html_url": "https://rseng.github.io/software/repository/github/chrishales/pieflag", "api_url": "https://rseng.github.io/software/api/repos/github/chrishales/pieflag"}, {"uid": "github/weber1158/eds-classification", "html_url": "https://rseng.github.io/software/repository/github/weber1158/eds-classification", "api_url": "https://rseng.github.io/software/api/repos/github/weber1158/eds-classification"}, {"uid": "github/dcjones/quip", "html_url": "https://rseng.github.io/software/repository/github/dcjones/quip", "api_url": "https://rseng.github.io/software/api/repos/github/dcjones/quip"}, {"uid": "github/vallima/PRyMordial", "html_url": "https://rseng.github.io/software/repository/github/vallima/PRyMordial", "api_url": "https://rseng.github.io/software/api/repos/github/vallima/PRyMordial"}, {"uid": "github/alekseyzimin/ufasta", "html_url": "https://rseng.github.io/software/repository/github/alekseyzimin/ufasta", "api_url": "https://rseng.github.io/software/api/repos/github/alekseyzimin/ufasta"}, {"uid": "github/jah1994/PyTorchDIA", "html_url": "https://rseng.github.io/software/repository/github/jah1994/PyTorchDIA", "api_url": "https://rseng.github.io/software/api/repos/github/jah1994/PyTorchDIA"}, {"uid": "github/mfruzan/HaploMaker", "html_url": "https://rseng.github.io/software/repository/github/mfruzan/HaploMaker", "api_url": "https://rseng.github.io/software/api/repos/github/mfruzan/HaploMaker"}, {"uid": "github/maserlib/ExPRES", "html_url": "https://rseng.github.io/software/repository/github/maserlib/ExPRES", "api_url": "https://rseng.github.io/software/api/repos/github/maserlib/ExPRES"}, {"uid": "github/zhongqiu1245/CCS-Net", "html_url": "https://rseng.github.io/software/repository/github/zhongqiu1245/CCS-Net", "api_url": "https://rseng.github.io/software/api/repos/github/zhongqiu1245/CCS-Net"}, {"uid": "github/xraypy/xraylarch", "html_url": "https://rseng.github.io/software/repository/github/xraypy/xraylarch", "api_url": "https://rseng.github.io/software/api/repos/github/xraypy/xraylarch"}, {"uid": "github/cieslar/Indri", "html_url": "https://rseng.github.io/software/repository/github/cieslar/Indri", "api_url": "https://rseng.github.io/software/api/repos/github/cieslar/Indri"}, {"uid": "github/cwinpy/cwinpy", "html_url": "https://rseng.github.io/software/repository/github/cwinpy/cwinpy", "api_url": "https://rseng.github.io/software/api/repos/github/cwinpy/cwinpy"}, {"uid": "github/agnesbrnb/MetIDfyR", "html_url": "https://rseng.github.io/software/repository/github/agnesbrnb/MetIDfyR", "api_url": "https://rseng.github.io/software/api/repos/github/agnesbrnb/MetIDfyR"}, {"uid": "github/bioAI-Oslo/Spikeometric", "html_url": "https://rseng.github.io/software/repository/github/bioAI-Oslo/Spikeometric", "api_url": "https://rseng.github.io/software/api/repos/github/bioAI-Oslo/Spikeometric"}, {"uid": "github/geoffryan/afterglowpy", "html_url": "https://rseng.github.io/software/repository/github/geoffryan/afterglowpy", "api_url": "https://rseng.github.io/software/api/repos/github/geoffryan/afterglowpy"}, {"uid": "github/ppsp-team/PyNM", "html_url": "https://rseng.github.io/software/repository/github/ppsp-team/PyNM", "api_url": "https://rseng.github.io/software/api/repos/github/ppsp-team/PyNM"}, {"uid": "github/castro-gzlz/TESS-cont", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/TESS-cont", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/TESS-cont"}, {"uid": "github/castro-gzlz/mr-plotter", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/mr-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/mr-plotter"}, {"uid": "github/jfowkes/pycutest", "html_url": "https://rseng.github.io/software/repository/github/jfowkes/pycutest", "api_url": "https://rseng.github.io/software/api/repos/github/jfowkes/pycutest"}, {"uid": "github/10XGenomics/bamtofastq", "html_url": "https://rseng.github.io/software/repository/github/10XGenomics/bamtofastq", "api_url": "https://rseng.github.io/software/api/repos/github/10XGenomics/bamtofastq"}, {"uid": "github/deepmedic/deepmedic", "html_url": "https://rseng.github.io/software/repository/github/deepmedic/deepmedic", "api_url": "https://rseng.github.io/software/api/repos/github/deepmedic/deepmedic"}, {"uid": "github/RTIInternational/gobbli", "html_url": "https://rseng.github.io/software/repository/github/RTIInternational/gobbli", "api_url": "https://rseng.github.io/software/api/repos/github/RTIInternational/gobbli"}, {"uid": "github/lucydot/effmass", "html_url": "https://rseng.github.io/software/repository/github/lucydot/effmass", "api_url": "https://rseng.github.io/software/api/repos/github/lucydot/effmass"}, {"uid": "github/nikhil-sarin/redback", "html_url": "https://rseng.github.io/software/repository/github/nikhil-sarin/redback", "api_url": "https://rseng.github.io/software/api/repos/github/nikhil-sarin/redback"}, {"uid": "github/babelomics/impuSARS", "html_url": "https://rseng.github.io/software/repository/github/babelomics/impuSARS", "api_url": "https://rseng.github.io/software/api/repos/github/babelomics/impuSARS"}, {"uid": "github/timkartar/RNAscape", "html_url": "https://rseng.github.io/software/repository/github/timkartar/RNAscape", "api_url": "https://rseng.github.io/software/api/repos/github/timkartar/RNAscape"}, {"uid": "github/Electrostatics/apbs", "html_url": "https://rseng.github.io/software/repository/github/Electrostatics/apbs", "api_url": "https://rseng.github.io/software/api/repos/github/Electrostatics/apbs"}, {"uid": "github/exciting/excitingtools", "html_url": "https://rseng.github.io/software/repository/github/exciting/excitingtools", "api_url": "https://rseng.github.io/software/api/repos/github/exciting/excitingtools"}, {"uid": "github/sbi-dev/sbi", "html_url": "https://rseng.github.io/software/repository/github/sbi-dev/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/sbi-dev/sbi"}, {"uid": "github/TrackerControl/tracker-control-android", "html_url": "https://rseng.github.io/software/repository/github/TrackerControl/tracker-control-android", "api_url": "https://rseng.github.io/software/api/repos/github/TrackerControl/tracker-control-android"}, {"uid": "github/PyPO-dev/PyPO", "html_url": "https://rseng.github.io/software/repository/github/PyPO-dev/PyPO", "api_url": "https://rseng.github.io/software/api/repos/github/PyPO-dev/PyPO"}, {"uid": "github/DMGW-Goethe/imripy", "html_url": "https://rseng.github.io/software/repository/github/DMGW-Goethe/imripy", "api_url": "https://rseng.github.io/software/api/repos/github/DMGW-Goethe/imripy"}, {"uid": "github/technic960183/spherimatch", "html_url": "https://rseng.github.io/software/repository/github/technic960183/spherimatch", "api_url": "https://rseng.github.io/software/api/repos/github/technic960183/spherimatch"}, {"uid": "github/Ruiz-HCI-Lab/ggMOB", "html_url": "https://rseng.github.io/software/repository/github/Ruiz-HCI-Lab/ggMOB", "api_url": "https://rseng.github.io/software/api/repos/github/Ruiz-HCI-Lab/ggMOB"}, {"uid": "github/hveerten/katu", "html_url": "https://rseng.github.io/software/repository/github/hveerten/katu", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/katu"}, {"uid": "github/hveerten/boxfit", "html_url": "https://rseng.github.io/software/repository/github/hveerten/boxfit", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/boxfit"}, {"uid": "github/dnafinder/uroccomp", "html_url": "https://rseng.github.io/software/repository/github/dnafinder/uroccomp", "api_url": "https://rseng.github.io/software/api/repos/github/dnafinder/uroccomp"}, {"uid": "github/aymgal/COOLEST", "html_url": "https://rseng.github.io/software/repository/github/aymgal/COOLEST", "api_url": "https://rseng.github.io/software/api/repos/github/aymgal/COOLEST"}, {"uid": "github/grdspcht/ggret", "html_url": "https://rseng.github.io/software/repository/github/grdspcht/ggret", "api_url": "https://rseng.github.io/software/api/repos/github/grdspcht/ggret"}, {"uid": "github/YangLab/CIRCexplorer2", "html_url": "https://rseng.github.io/software/repository/github/YangLab/CIRCexplorer2", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/CIRCexplorer2"}, {"uid": "github/YangLab/RNAlight", "html_url": "https://rseng.github.io/software/repository/github/YangLab/RNAlight", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/RNAlight"}, {"uid": "github/jkbonfield/io_lib", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/io_lib", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/io_lib"}, {"uid": "github/jkbonfield/htscodecs", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/htscodecs", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/htscodecs"}, {"uid": "github/jkbonfield/crumble", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/crumble", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/crumble"}, {"uid": "github/bids-standard/bids-validator", "html_url": "https://rseng.github.io/software/repository/github/bids-standard/bids-validator", "api_url": "https://rseng.github.io/software/api/repos/github/bids-standard/bids-validator"}, {"uid": "github/lemene/PECAT", "html_url": "https://rseng.github.io/software/repository/github/lemene/PECAT", "api_url": "https://rseng.github.io/software/api/repos/github/lemene/PECAT"}, {"uid": "github/mgcooper/baseflow", "html_url": "https://rseng.github.io/software/repository/github/mgcooper/baseflow", "api_url": "https://rseng.github.io/software/api/repos/github/mgcooper/baseflow"}, {"uid": "github/hematthi/SysSimPyPlots", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyPlots", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyPlots"}, {"uid": "github/hematthi/SysSimPyMMEN", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyMMEN", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyMMEN"}, {"uid": "github/itpplasma/GORILLA", "html_url": "https://rseng.github.io/software/repository/github/itpplasma/GORILLA", "api_url": "https://rseng.github.io/software/api/repos/github/itpplasma/GORILLA"}, {"uid": "github/CatarinaMMarques/FisherCosmology", "html_url": "https://rseng.github.io/software/repository/github/CatarinaMMarques/FisherCosmology", "api_url": "https://rseng.github.io/software/api/repos/github/CatarinaMMarques/FisherCosmology"}, {"uid": "github/JosephIsaacTurner/pypaperretriever", "html_url": "https://rseng.github.io/software/repository/github/JosephIsaacTurner/pypaperretriever", "api_url": "https://rseng.github.io/software/api/repos/github/JosephIsaacTurner/pypaperretriever"}, {"uid": "github/tum-pbs/PhiML", "html_url": "https://rseng.github.io/software/repository/github/tum-pbs/PhiML", "api_url": "https://rseng.github.io/software/api/repos/github/tum-pbs/PhiML"}, {"uid": "github/CMC-lab/TranCIT", "html_url": "https://rseng.github.io/software/repository/github/CMC-lab/TranCIT", "api_url": "https://rseng.github.io/software/api/repos/github/CMC-lab/TranCIT"}, {"uid": "github/cbroeckl/RAMClustR", "html_url": "https://rseng.github.io/software/repository/github/cbroeckl/RAMClustR", "api_url": "https://rseng.github.io/software/api/repos/github/cbroeckl/RAMClustR"}, {"uid": "github/ezquiaga/phazap", "html_url": "https://rseng.github.io/software/repository/github/ezquiaga/phazap", "api_url": "https://rseng.github.io/software/api/repos/github/ezquiaga/phazap"}, {"uid": "github/OwenWard/ppdiag", "html_url": "https://rseng.github.io/software/repository/github/OwenWard/ppdiag", "api_url": "https://rseng.github.io/software/api/repos/github/OwenWard/ppdiag"}, {"uid": "github/debbiemarkslab/plmc", "html_url": "https://rseng.github.io/software/repository/github/debbiemarkslab/plmc", "api_url": "https://rseng.github.io/software/api/repos/github/debbiemarkslab/plmc"}, {"uid": "github/lucian-ilie/DELPHI", "html_url": "https://rseng.github.io/software/repository/github/lucian-ilie/DELPHI", "api_url": "https://rseng.github.io/software/api/repos/github/lucian-ilie/DELPHI"}, {"uid": "github/cytham/nanovar", "html_url": "https://rseng.github.io/software/repository/github/cytham/nanovar", "api_url": "https://rseng.github.io/software/api/repos/github/cytham/nanovar"}, {"uid": "github/nawrockie/vadr", "html_url": "https://rseng.github.io/software/repository/github/nawrockie/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/nawrockie/vadr"}, {"uid": "github/haimengzhao/magic-microlensing", "html_url": "https://rseng.github.io/software/repository/github/haimengzhao/magic-microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/haimengzhao/magic-microlensing"}, {"uid": "github/aomlomics/tourmaline", "html_url": "https://rseng.github.io/software/repository/github/aomlomics/tourmaline", "api_url": "https://rseng.github.io/software/api/repos/github/aomlomics/tourmaline"}, {"uid": "github/DerrickWood/kraken2", "html_url": "https://rseng.github.io/software/repository/github/DerrickWood/kraken2", "api_url": "https://rseng.github.io/software/api/repos/github/DerrickWood/kraken2"}, {"uid": "github/geoelements/gns", "html_url": "https://rseng.github.io/software/repository/github/geoelements/gns", "api_url": "https://rseng.github.io/software/api/repos/github/geoelements/gns"}, {"uid": "github/RichardPIII/Cumulative-Time-Dilation", "html_url": "https://rseng.github.io/software/repository/github/RichardPIII/Cumulative-Time-Dilation", "api_url": "https://rseng.github.io/software/api/repos/github/RichardPIII/Cumulative-Time-Dilation"}, {"uid": "github/rohinkumar/correlcalc", "html_url": "https://rseng.github.io/software/repository/github/rohinkumar/correlcalc", "api_url": "https://rseng.github.io/software/api/repos/github/rohinkumar/correlcalc"}, {"uid": "github/vsquicciarini/madys", "html_url": "https://rseng.github.io/software/repository/github/vsquicciarini/madys", "api_url": "https://rseng.github.io/software/api/repos/github/vsquicciarini/madys"}, {"uid": "github/VeinsOfTheEarth/rabpro", "html_url": "https://rseng.github.io/software/repository/github/VeinsOfTheEarth/rabpro", "api_url": "https://rseng.github.io/software/api/repos/github/VeinsOfTheEarth/rabpro"}, {"uid": "github/luizfelippesr/galmag", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/galmag", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/galmag"}, {"uid": "github/luizfelippesr/magnetizer", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/magnetizer", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/magnetizer"}, {"uid": "github/stillwater-sc/universal", "html_url": "https://rseng.github.io/software/repository/github/stillwater-sc/universal", "api_url": "https://rseng.github.io/software/api/repos/github/stillwater-sc/universal"}, {"uid": "github/adriancorrendo/metrica", "html_url": "https://rseng.github.io/software/repository/github/adriancorrendo/metrica", "api_url": "https://rseng.github.io/software/api/repos/github/adriancorrendo/metrica"}, {"uid": "github/Mihart-web/CARBONETTE", "html_url": "https://rseng.github.io/software/repository/github/Mihart-web/CARBONETTE", "api_url": "https://rseng.github.io/software/api/repos/github/Mihart-web/CARBONETTE"}, {"uid": "github/gasparl/possa", "html_url": "https://rseng.github.io/software/repository/github/gasparl/possa", "api_url": "https://rseng.github.io/software/api/repos/github/gasparl/possa"}, {"uid": "github/dglaeser/gridformat", "html_url": "https://rseng.github.io/software/repository/github/dglaeser/gridformat", "api_url": "https://rseng.github.io/software/api/repos/github/dglaeser/gridformat"}, {"uid": "github/variomes/sibtm-variomes", "html_url": "https://rseng.github.io/software/repository/github/variomes/sibtm-variomes", "api_url": "https://rseng.github.io/software/api/repos/github/variomes/sibtm-variomes"}, {"uid": "github/iquasere/UPIMAPI", "html_url": "https://rseng.github.io/software/repository/github/iquasere/UPIMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/iquasere/UPIMAPI"}, {"uid": "github/mtceballos/SIRENAdoc", "html_url": "https://rseng.github.io/software/repository/github/mtceballos/SIRENAdoc", "api_url": "https://rseng.github.io/software/api/repos/github/mtceballos/SIRENAdoc"}, {"uid": "github/VirtualPhotonics/MieSimulatorGUI", "html_url": "https://rseng.github.io/software/repository/github/VirtualPhotonics/MieSimulatorGUI", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPhotonics/MieSimulatorGUI"}, {"uid": "github/BPSB/combine-p-values-discrete", "html_url": "https://rseng.github.io/software/repository/github/BPSB/combine-p-values-discrete", "api_url": "https://rseng.github.io/software/api/repos/github/BPSB/combine-p-values-discrete"}, {"uid": "github/bsumlin/PyMieScatt", "html_url": "https://rseng.github.io/software/repository/github/bsumlin/PyMieScatt", "api_url": "https://rseng.github.io/software/api/repos/github/bsumlin/PyMieScatt"}, {"uid": "github/lukapecnik/NiaAML", "html_url": "https://rseng.github.io/software/repository/github/lukapecnik/NiaAML", "api_url": "https://rseng.github.io/software/api/repos/github/lukapecnik/NiaAML"}, {"uid": "github/TinkerTools/tinker9", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/tinker9", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/tinker9"}, {"uid": "github/TinkerTools/Tinker-HP", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/Tinker-HP", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/Tinker-HP"}, {"uid": "github/LidkeLab/matlab-instrument-control", "html_url": "https://rseng.github.io/software/repository/github/LidkeLab/matlab-instrument-control", "api_url": "https://rseng.github.io/software/api/repos/github/LidkeLab/matlab-instrument-control"}, {"uid": "github/jradavenport/TheHammer", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/TheHammer", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/TheHammer"}, {"uid": "github/jradavenport/appaloosa", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/appaloosa", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/appaloosa"}, {"uid": "github/jradavenport/FBEYE", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/FBEYE", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/FBEYE"}, {"uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", "html_url": "https://rseng.github.io/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", "api_url": "https://rseng.github.io/software/api/repos/github/sunnyvagnozzi/Braneworld-extra-dimensions"}, {"uid": "github/mikolmogorov/Flye", "html_url": "https://rseng.github.io/software/repository/github/mikolmogorov/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/mikolmogorov/Flye"}, {"uid": "github/areenberg/MDPSolver", "html_url": "https://rseng.github.io/software/repository/github/areenberg/MDPSolver", "api_url": "https://rseng.github.io/software/api/repos/github/areenberg/MDPSolver"}, {"uid": "github/TNEL-UCSD/autolfads-deploy", "html_url": "https://rseng.github.io/software/repository/github/TNEL-UCSD/autolfads-deploy", "api_url": "https://rseng.github.io/software/api/repos/github/TNEL-UCSD/autolfads-deploy"}, {"uid": "github/teuben/QAC", "html_url": "https://rseng.github.io/software/repository/github/teuben/QAC", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/QAC"}, {"uid": "github/teuben/DataComb", "html_url": "https://rseng.github.io/software/repository/github/teuben/DataComb", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/DataComb"}, {"uid": "github/teuben/nemo", "html_url": "https://rseng.github.io/software/repository/github/teuben/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/nemo"}, {"uid": "github/ahcm/ffindex", "html_url": "https://rseng.github.io/software/repository/github/ahcm/ffindex", "api_url": "https://rseng.github.io/software/api/repos/github/ahcm/ffindex"}, {"uid": "github/apcamargo/prodigal-gv", "html_url": "https://rseng.github.io/software/repository/github/apcamargo/prodigal-gv", "api_url": "https://rseng.github.io/software/api/repos/github/apcamargo/prodigal-gv"}, {"uid": "github/pyomeca/biosiglive", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biosiglive", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biosiglive"}, {"uid": "github/pyomeca/ezc3d", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/ezc3d", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/ezc3d"}, {"uid": "github/pyomeca/biorbd", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biorbd", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biorbd"}, {"uid": "github/PolymerGuy/recolo", "html_url": "https://rseng.github.io/software/repository/github/PolymerGuy/recolo", "api_url": "https://rseng.github.io/software/api/repos/github/PolymerGuy/recolo"}, {"uid": "github/pandegroup/openmm", "html_url": "https://rseng.github.io/software/repository/github/pandegroup/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/pandegroup/openmm"}, {"uid": "github/amanchokshi/EMBERS", "html_url": "https://rseng.github.io/software/repository/github/amanchokshi/EMBERS", "api_url": "https://rseng.github.io/software/api/repos/github/amanchokshi/EMBERS"}, {"uid": "github/free1234hm/CLAM", "html_url": "https://rseng.github.io/software/repository/github/free1234hm/CLAM", "api_url": "https://rseng.github.io/software/api/repos/github/free1234hm/CLAM"}, {"uid": "github/JensUweUlrich/ReadBouncer", "html_url": "https://rseng.github.io/software/repository/github/JensUweUlrich/ReadBouncer", "api_url": "https://rseng.github.io/software/api/repos/github/JensUweUlrich/ReadBouncer"}, {"uid": "github/dftd3/simple-dftd3", "html_url": "https://rseng.github.io/software/repository/github/dftd3/simple-dftd3", "api_url": "https://rseng.github.io/software/api/repos/github/dftd3/simple-dftd3"}, {"uid": "github/ExeClim/Isca", "html_url": "https://rseng.github.io/software/repository/github/ExeClim/Isca", "api_url": "https://rseng.github.io/software/api/repos/github/ExeClim/Isca"}, {"uid": "github/ebmonson/2DFFTUtils-Module", "html_url": "https://rseng.github.io/software/repository/github/ebmonson/2DFFTUtils-Module", "api_url": "https://rseng.github.io/software/api/repos/github/ebmonson/2DFFTUtils-Module"}, {"uid": "github/GeneDx/scramble", "html_url": "https://rseng.github.io/software/repository/github/GeneDx/scramble", "api_url": "https://rseng.github.io/software/api/repos/github/GeneDx/scramble"}, {"uid": "github/KskAdch/TopologicalNumbers.jl", "html_url": "https://rseng.github.io/software/repository/github/KskAdch/TopologicalNumbers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/KskAdch/TopologicalNumbers.jl"}, {"uid": "github/einsteinpy/einsteinpy", "html_url": "https://rseng.github.io/software/repository/github/einsteinpy/einsteinpy", "api_url": "https://rseng.github.io/software/api/repos/github/einsteinpy/einsteinpy"}, {"uid": "github/YinanZhao21/SOAP_GPU", "html_url": "https://rseng.github.io/software/repository/github/YinanZhao21/SOAP_GPU", "api_url": "https://rseng.github.io/software/api/repos/github/YinanZhao21/SOAP_GPU"}, {"uid": "github/opengeos/geoai", "html_url": "https://rseng.github.io/software/repository/github/opengeos/geoai", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/geoai"}, {"uid": "github/opengeos/segment-geospatial", "html_url": "https://rseng.github.io/software/repository/github/opengeos/segment-geospatial", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/segment-geospatial"}, {"uid": "github/opengeos/HyperCoast", "html_url": "https://rseng.github.io/software/repository/github/opengeos/HyperCoast", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/HyperCoast"}, {"uid": "github/liulab-dfci/TRUST4", "html_url": "https://rseng.github.io/software/repository/github/liulab-dfci/TRUST4", "api_url": "https://rseng.github.io/software/api/repos/github/liulab-dfci/TRUST4"}, {"uid": "github/Jonathanfreundlich/CuspCore", "html_url": "https://rseng.github.io/software/repository/github/Jonathanfreundlich/CuspCore", "api_url": "https://rseng.github.io/software/api/repos/github/Jonathanfreundlich/CuspCore"}, {"uid": "github/PaulSt/NGSTrefftz", "html_url": "https://rseng.github.io/software/repository/github/PaulSt/NGSTrefftz", "api_url": "https://rseng.github.io/software/api/repos/github/PaulSt/NGSTrefftz"}, {"uid": "github/mdruett/COCOPLOT", "html_url": "https://rseng.github.io/software/repository/github/mdruett/COCOPLOT", "api_url": "https://rseng.github.io/software/api/repos/github/mdruett/COCOPLOT"}, {"uid": "github/theia-dev/Qiber3D", "html_url": "https://rseng.github.io/software/repository/github/theia-dev/Qiber3D", "api_url": "https://rseng.github.io/software/api/repos/github/theia-dev/Qiber3D"}, {"uid": "github/LondonBiofoundry/basicsynbio", "html_url": "https://rseng.github.io/software/repository/github/LondonBiofoundry/basicsynbio", "api_url": "https://rseng.github.io/software/api/repos/github/LondonBiofoundry/basicsynbio"}, {"uid": "github/bcerutti/Zeltron-code", "html_url": "https://rseng.github.io/software/repository/github/bcerutti/Zeltron-code", "api_url": "https://rseng.github.io/software/api/repos/github/bcerutti/Zeltron-code"}, {"uid": "github/pierfied/karmma", "html_url": "https://rseng.github.io/software/repository/github/pierfied/karmma", "api_url": "https://rseng.github.io/software/api/repos/github/pierfied/karmma"}, {"uid": "github/iobio-zjut/IPTDFold", "html_url": "https://rseng.github.io/software/repository/github/iobio-zjut/IPTDFold", "api_url": "https://rseng.github.io/software/api/repos/github/iobio-zjut/IPTDFold"}, {"uid": "github/andrewmoore73/SourceDetect", "html_url": "https://rseng.github.io/software/repository/github/andrewmoore73/SourceDetect", "api_url": "https://rseng.github.io/software/api/repos/github/andrewmoore73/SourceDetect"}, {"uid": "github/ChenfuShi/HiChIP_peaks", "html_url": "https://rseng.github.io/software/repository/github/ChenfuShi/HiChIP_peaks", "api_url": "https://rseng.github.io/software/api/repos/github/ChenfuShi/HiChIP_peaks"}, {"uid": "github/tongzhouxu/mashpit", "html_url": "https://rseng.github.io/software/repository/github/tongzhouxu/mashpit", "api_url": "https://rseng.github.io/software/api/repos/github/tongzhouxu/mashpit"}, {"uid": "github/aabdurrouf/piXedfit", "html_url": "https://rseng.github.io/software/repository/github/aabdurrouf/piXedfit", "api_url": "https://rseng.github.io/software/api/repos/github/aabdurrouf/piXedfit"}, {"uid": "github/tao-bioinfo/MiFish", "html_url": "https://rseng.github.io/software/repository/github/tao-bioinfo/MiFish", "api_url": "https://rseng.github.io/software/api/repos/github/tao-bioinfo/MiFish"}, {"uid": "github/wasserman-group/pyCADMium", "html_url": "https://rseng.github.io/software/repository/github/wasserman-group/pyCADMium", "api_url": "https://rseng.github.io/software/api/repos/github/wasserman-group/pyCADMium"}, {"uid": "github/cheng-zhao/FCFC", "html_url": "https://rseng.github.io/software/repository/github/cheng-zhao/FCFC", "api_url": "https://rseng.github.io/software/api/repos/github/cheng-zhao/FCFC"}, {"uid": "github/CajoterBraak/demc2", "html_url": "https://rseng.github.io/software/repository/github/CajoterBraak/demc2", "api_url": "https://rseng.github.io/software/api/repos/github/CajoterBraak/demc2"}, {"uid": "github/saltastro/pyhrs", "html_url": "https://rseng.github.io/software/repository/github/saltastro/pyhrs", "api_url": "https://rseng.github.io/software/api/repos/github/saltastro/pyhrs"}, {"uid": "github/DICP1810/ComMap", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/ComMap", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/ComMap"}, {"uid": "github/DICP1810/SpotLink", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/SpotLink", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/SpotLink"}, {"uid": "github/valboz/VBMicroLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBMicroLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBMicroLensing"}, {"uid": "github/valboz/VBBinaryLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBBinaryLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBBinaryLensing"}, {"uid": "github/valboz/RTModel", "html_url": "https://rseng.github.io/software/repository/github/valboz/RTModel", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/RTModel"}, {"uid": "github/BackmanLab/PWSpy", "html_url": "https://rseng.github.io/software/repository/github/BackmanLab/PWSpy", "api_url": "https://rseng.github.io/software/api/repos/github/BackmanLab/PWSpy"}, {"uid": "github/rgmyr/corebreakout", "html_url": "https://rseng.github.io/software/repository/github/rgmyr/corebreakout", "api_url": "https://rseng.github.io/software/api/repos/github/rgmyr/corebreakout"}, {"uid": "github/gnuradio/gnuradio", "html_url": "https://rseng.github.io/software/repository/github/gnuradio/gnuradio", "api_url": "https://rseng.github.io/software/api/repos/github/gnuradio/gnuradio"}, {"uid": "github/YongyiLuo98/BVSim", "html_url": "https://rseng.github.io/software/repository/github/YongyiLuo98/BVSim", "api_url": "https://rseng.github.io/software/api/repos/github/YongyiLuo98/BVSim"}, {"uid": "github/Kkritos/Rapster", "html_url": "https://rseng.github.io/software/repository/github/Kkritos/Rapster", "api_url": "https://rseng.github.io/software/api/repos/github/Kkritos/Rapster"}, {"uid": "github/spyder-ide/spyder", "html_url": "https://rseng.github.io/software/repository/github/spyder-ide/spyder", "api_url": "https://rseng.github.io/software/api/repos/github/spyder-ide/spyder"}, {"uid": "github/FrdCHK/serial-MultiView", "html_url": "https://rseng.github.io/software/repository/github/FrdCHK/serial-MultiView", "api_url": "https://rseng.github.io/software/api/repos/github/FrdCHK/serial-MultiView"}, {"uid": "github/duetosymmetry/qnm", "html_url": "https://rseng.github.io/software/repository/github/duetosymmetry/qnm", "api_url": "https://rseng.github.io/software/api/repos/github/duetosymmetry/qnm"}, {"uid": "github/SoSongzhi/PVGA", "html_url": "https://rseng.github.io/software/repository/github/SoSongzhi/PVGA", "api_url": "https://rseng.github.io/software/api/repos/github/SoSongzhi/PVGA"}, {"uid": "github/ParaFly/ParaFly", "html_url": "https://rseng.github.io/software/repository/github/ParaFly/ParaFly", "api_url": "https://rseng.github.io/software/api/repos/github/ParaFly/ParaFly"}, {"uid": "github/multiply-org/sar-pre-processing", "html_url": "https://rseng.github.io/software/repository/github/multiply-org/sar-pre-processing", "api_url": "https://rseng.github.io/software/api/repos/github/multiply-org/sar-pre-processing"}, {"uid": "github/patkel/big-macs-calibrate", "html_url": "https://rseng.github.io/software/repository/github/patkel/big-macs-calibrate", "api_url": "https://rseng.github.io/software/api/repos/github/patkel/big-macs-calibrate"}, {"uid": "github/amerand/PMOIRED", "html_url": "https://rseng.github.io/software/repository/github/amerand/PMOIRED", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/PMOIRED"}, {"uid": "github/amerand/SPIPS", "html_url": "https://rseng.github.io/software/repository/github/amerand/SPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/SPIPS"}, {"uid": "github/amerand/CANDID", "html_url": "https://rseng.github.io/software/repository/github/amerand/CANDID", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/CANDID"}, {"uid": "github/johannes-titz/cofad", "html_url": "https://rseng.github.io/software/repository/github/johannes-titz/cofad", "api_url": "https://rseng.github.io/software/api/repos/github/johannes-titz/cofad"}, {"uid": "github/seamusclarke/rjplots", "html_url": "https://rseng.github.io/software/repository/github/seamusclarke/rjplots", "api_url": "https://rseng.github.io/software/api/repos/github/seamusclarke/rjplots"}, {"uid": "github/LucyMcGowan/tipr", "html_url": "https://rseng.github.io/software/repository/github/LucyMcGowan/tipr", "api_url": "https://rseng.github.io/software/api/repos/github/LucyMcGowan/tipr"}, {"uid": "github/plumed/plumed2", "html_url": "https://rseng.github.io/software/repository/github/plumed/plumed2", "api_url": "https://rseng.github.io/software/api/repos/github/plumed/plumed2"}, {"uid": "github/fstrozzi/Fastool", "html_url": "https://rseng.github.io/software/repository/github/fstrozzi/Fastool", "api_url": "https://rseng.github.io/software/api/repos/github/fstrozzi/Fastool"}, {"uid": "github/jeffcsauer/arcos_arcospy_information", "html_url": "https://rseng.github.io/software/repository/github/jeffcsauer/arcos_arcospy_information", "api_url": "https://rseng.github.io/software/api/repos/github/jeffcsauer/arcos_arcospy_information"}, {"uid": "github/barentsen/k2flix", "html_url": "https://rseng.github.io/software/repository/github/barentsen/k2flix", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/k2flix"}, {"uid": "github/barentsen/dave", "html_url": "https://rseng.github.io/software/repository/github/barentsen/dave", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/dave"}, {"uid": "github/xfangcosmo/FFTLog-and-beyond", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/FFTLog-and-beyond", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/FFTLog-and-beyond"}, {"uid": "github/xfangcosmo/2DFFTLog", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/2DFFTLog", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/2DFFTLog"}, {"uid": "github/FitSNAP/FitSNAP", "html_url": "https://rseng.github.io/software/repository/github/FitSNAP/FitSNAP", "api_url": "https://rseng.github.io/software/api/repos/github/FitSNAP/FitSNAP"}, {"uid": "github/deepmodeling/DMFF", "html_url": "https://rseng.github.io/software/repository/github/deepmodeling/DMFF", "api_url": "https://rseng.github.io/software/api/repos/github/deepmodeling/DMFF"}, {"uid": "github/bonsai-team/Porechop_ABI", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/Porechop_ABI", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/Porechop_ABI"}, {"uid": "github/bonsai-team/matam", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/matam", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/matam"}, {"uid": "github/meinardmueller/synctoolbox", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/synctoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/synctoolbox"}, {"uid": "github/meinardmueller/libfmp", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/libfmp", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/libfmp"}, {"uid": "github/NLeSC/structure-from-motion", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/structure-from-motion", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/structure-from-motion"}, {"uid": "github/NLeSC/xenon-flow", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-flow", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-flow"}, {"uid": "github/NLeSC/root-conda-recipes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/root-conda-recipes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/root-conda-recipes"}, {"uid": "github/NLeSC/SalientDetector-python", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-python", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-python"}, {"uid": "github/NLeSC/eEcology-SMS-reciever", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-SMS-reciever", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-SMS-reciever"}, {"uid": "github/NLeSC/nlesc-serverless-boilerplate", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/nlesc-serverless-boilerplate", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/nlesc-serverless-boilerplate"}, {"uid": "github/NLeSC/noodles", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/noodles", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/noodles"}, {"uid": "github/NLeSC/eAstroViz", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eAstroViz", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eAstroViz"}, {"uid": "github/NLeSC/spot", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/spot", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/spot"}, {"uid": "github/NLeSC/ahn-pointcloud-viewer-ws", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ahn-pointcloud-viewer-ws"}, {"uid": "github/NLeSC/docker-couch-admin", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/docker-couch-admin", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/docker-couch-admin"}, {"uid": "github/NLeSC/xtas", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xtas", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xtas"}, {"uid": "github/NLeSC/compressing-the-sky", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/compressing-the-sky", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/compressing-the-sky"}, {"uid": "github/NLeSC/boatswain", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/boatswain", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/boatswain"}, {"uid": "github/NLeSC/PattyData", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyData", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyData"}, {"uid": "github/NLeSC/pycoeman", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pycoeman", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pycoeman"}, {"uid": "github/NLeSC/litstudy", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/litstudy", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/litstudy"}, {"uid": "github/NLeSC/ShiCo", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ShiCo", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ShiCo"}, {"uid": "github/NLeSC/mcfly", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/mcfly", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/mcfly"}, {"uid": "github/NLeSC/UncertaintyVisualization", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/UncertaintyVisualization", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/UncertaintyVisualization"}, {"uid": "github/NLeSC/eEcology-Annotation-WS", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Annotation-WS", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Annotation-WS"}, {"uid": "github/NLeSC/DiVE", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/DiVE", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/DiVE"}, {"uid": "github/NLeSC/pattyvis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pattyvis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pattyvis"}, {"uid": "github/NLeSC/PattyAnalytics", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyAnalytics"}, {"uid": "github/NLeSC/esibayes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/esibayes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/esibayes"}, {"uid": "github/NLeSC/cptm", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/cptm", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/cptm"}, {"uid": "github/NLeSC/Chemical-Analytics-Platform", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Chemical-Analytics-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Chemical-Analytics-Platform"}, {"uid": "github/NLeSC/xenon-grpc", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-grpc"}, {"uid": "github/NLeSC/python-pcl", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-pcl", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-pcl"}, {"uid": "github/NLeSC/baklava", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/baklava", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/baklava"}, {"uid": "github/NLeSC/eEcology-script-wrapper", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-script-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-script-wrapper"}, {"uid": "github/NLeSC/fairdatapoint", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/fairdatapoint", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/fairdatapoint"}, {"uid": "github/NLeSC/SalientDescriptor-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDescriptor-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDescriptor-matlab"}, {"uid": "github/NLeSC/eSalsa-MPI", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eSalsa-MPI", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eSalsa-MPI"}, {"uid": "github/NLeSC/case-law-app", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/case-law-app", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/case-law-app"}, {"uid": "github/NLeSC/eEcology-Classification", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Classification", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Classification"}, {"uid": "github/NLeSC/MAGMa", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/MAGMa", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/MAGMa"}, {"uid": "github/NLeSC/xenon-cli", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-cli", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-cli"}, {"uid": "github/NLeSC/lokum", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/lokum", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/lokum"}, {"uid": "github/NLeSC/Massive-PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Massive-PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Massive-PotreeConverter"}, {"uid": "github/NLeSC/hadrianus-scripts", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/hadrianus-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/hadrianus-scripts"}, {"uid": "github/NLeSC/EEG-epilepsy-diagnosis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/EEG-epilepsy-diagnosis"}, {"uid": "github/NLeSC/ExtJS-DateTime", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ExtJS-DateTime", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ExtJS-DateTime"}, {"uid": "github/NLeSC/OCTSegmentation", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/OCTSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/OCTSegmentation"}, {"uid": "github/NLeSC/SalientDetector-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-matlab"}, {"uid": "github/NLeSC/python-template", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-template", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-template"}, {"uid": "github/NLeSC/osmium", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/osmium", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/osmium"}, {"uid": "github/toros-astro/corral", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/corral", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/corral"}, {"uid": "github/toros-astro/astroalign-legacy", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/astroalign-legacy", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/astroalign-legacy"}, {"uid": "github/tingyuansen/The_Payne", "html_url": "https://rseng.github.io/software/repository/github/tingyuansen/The_Payne", "api_url": "https://rseng.github.io/software/api/repos/github/tingyuansen/The_Payne"}, {"uid": "github/MRChemSoft/mrchem", "html_url": "https://rseng.github.io/software/repository/github/MRChemSoft/mrchem", "api_url": "https://rseng.github.io/software/api/repos/github/MRChemSoft/mrchem"}, {"uid": "github/esteinig/nanoq", "html_url": "https://rseng.github.io/software/repository/github/esteinig/nanoq", "api_url": "https://rseng.github.io/software/api/repos/github/esteinig/nanoq"}, {"uid": "github/pybamm-team/liionpack", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/liionpack", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/liionpack"}, {"uid": "github/pybamm-team/PyBaMM", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/PyBaMM", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/PyBaMM"}, {"uid": "github/dgobbi/vtk-dicom", "html_url": "https://rseng.github.io/software/repository/github/dgobbi/vtk-dicom", "api_url": "https://rseng.github.io/software/api/repos/github/dgobbi/vtk-dicom"}, {"uid": "github/denglab/SeqSero", "html_url": "https://rseng.github.io/software/repository/github/denglab/SeqSero", "api_url": "https://rseng.github.io/software/api/repos/github/denglab/SeqSero"}, {"uid": "github/Cambridge-ICCS/FTorch", "html_url": "https://rseng.github.io/software/repository/github/Cambridge-ICCS/FTorch", "api_url": "https://rseng.github.io/software/api/repos/github/Cambridge-ICCS/FTorch"}, {"uid": "github/harrispopgen/mutyper", "html_url": "https://rseng.github.io/software/repository/github/harrispopgen/mutyper", "api_url": "https://rseng.github.io/software/api/repos/github/harrispopgen/mutyper"}, {"uid": "github/AbeelLab/lorikeet", "html_url": "https://rseng.github.io/software/repository/github/AbeelLab/lorikeet", "api_url": "https://rseng.github.io/software/api/repos/github/AbeelLab/lorikeet"}, {"uid": "github/sandialabs/pvOps", "html_url": "https://rseng.github.io/software/repository/github/sandialabs/pvOps", "api_url": "https://rseng.github.io/software/api/repos/github/sandialabs/pvOps"}, {"uid": "github/nimble-dev/nimbleHMC", "html_url": "https://rseng.github.io/software/repository/github/nimble-dev/nimbleHMC", "api_url": "https://rseng.github.io/software/api/repos/github/nimble-dev/nimbleHMC"}, {"uid": "github/savila/halogen", "html_url": "https://rseng.github.io/software/repository/github/savila/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/savila/halogen"}, {"uid": "github/ReSurfEMG/ReSurfEMG", "html_url": "https://rseng.github.io/software/repository/github/ReSurfEMG/ReSurfEMG", "api_url": "https://rseng.github.io/software/api/repos/github/ReSurfEMG/ReSurfEMG"}, {"uid": "github/JuliaManifolds/Manopt.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaManifolds/Manopt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaManifolds/Manopt.jl"}, {"uid": "github/Huracan-project/huracanpy", "html_url": "https://rseng.github.io/software/repository/github/Huracan-project/huracanpy", "api_url": "https://rseng.github.io/software/api/repos/github/Huracan-project/huracanpy"}, {"uid": "github/0x0f0f0f/Metatheory.jl", "html_url": "https://rseng.github.io/software/repository/github/0x0f0f0f/Metatheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/0x0f0f0f/Metatheory.jl"}, {"uid": "github/adtzlr/felupe", "html_url": "https://rseng.github.io/software/repository/github/adtzlr/felupe", "api_url": "https://rseng.github.io/software/api/repos/github/adtzlr/felupe"}, {"uid": "github/thetisproject/thetis", "html_url": "https://rseng.github.io/software/repository/github/thetisproject/thetis", "api_url": "https://rseng.github.io/software/api/repos/github/thetisproject/thetis"}, {"uid": "github/BodeTobias/AutoPDEx", "html_url": "https://rseng.github.io/software/repository/github/BodeTobias/AutoPDEx", "api_url": "https://rseng.github.io/software/api/repos/github/BodeTobias/AutoPDEx"}, {"uid": "github/ahoward-cf/ppmap", "html_url": "https://rseng.github.io/software/repository/github/ahoward-cf/ppmap", "api_url": "https://rseng.github.io/software/api/repos/github/ahoward-cf/ppmap"}, {"uid": "github/GreenBankObservatory/gbtgridder", "html_url": "https://rseng.github.io/software/repository/github/GreenBankObservatory/gbtgridder", "api_url": "https://rseng.github.io/software/api/repos/github/GreenBankObservatory/gbtgridder"}, {"uid": "github/stevengj/nlopt", "html_url": "https://rseng.github.io/software/repository/github/stevengj/nlopt", "api_url": "https://rseng.github.io/software/api/repos/github/stevengj/nlopt"}, {"uid": "github/BGI-Qingdao/TGS-GapCloser", "html_url": "https://rseng.github.io/software/repository/github/BGI-Qingdao/TGS-GapCloser", "api_url": "https://rseng.github.io/software/api/repos/github/BGI-Qingdao/TGS-GapCloser"}, {"uid": "github/tinawunderlich/MultichannelGPR", "html_url": "https://rseng.github.io/software/repository/github/tinawunderlich/MultichannelGPR", "api_url": "https://rseng.github.io/software/api/repos/github/tinawunderlich/MultichannelGPR"}, {"uid": "github/tessgi/tvguide", "html_url": "https://rseng.github.io/software/repository/github/tessgi/tvguide", "api_url": "https://rseng.github.io/software/api/repos/github/tessgi/tvguide"}, {"uid": "github/cweniger/swordfish", "html_url": "https://rseng.github.io/software/repository/github/cweniger/swordfish", "api_url": "https://rseng.github.io/software/api/repos/github/cweniger/swordfish"}, {"uid": "github/mmore500/hstrat", "html_url": "https://rseng.github.io/software/repository/github/mmore500/hstrat", "api_url": "https://rseng.github.io/software/api/repos/github/mmore500/hstrat"}, {"uid": "github/dkn16/H21F", "html_url": "https://rseng.github.io/software/repository/github/dkn16/H21F", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/H21F"}, {"uid": "github/dkn16/Synax", "html_url": "https://rseng.github.io/software/repository/github/dkn16/Synax", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/Synax"}, {"uid": "github/nsoranzo/sspace_basic", "html_url": "https://rseng.github.io/software/repository/github/nsoranzo/sspace_basic", "api_url": "https://rseng.github.io/software/api/repos/github/nsoranzo/sspace_basic"}, {"uid": "github/aertslab/pySCENIC", "html_url": "https://rseng.github.io/software/repository/github/aertslab/pySCENIC", "api_url": "https://rseng.github.io/software/api/repos/github/aertslab/pySCENIC"}, {"uid": "github/mentatpsi/OSGenome", "html_url": "https://rseng.github.io/software/repository/github/mentatpsi/OSGenome", "api_url": "https://rseng.github.io/software/api/repos/github/mentatpsi/OSGenome"}, {"uid": "github/pysat/pysat", "html_url": "https://rseng.github.io/software/repository/github/pysat/pysat", "api_url": "https://rseng.github.io/software/api/repos/github/pysat/pysat"}, {"uid": "github/yqiuu/spectuner", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/spectuner", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/spectuner"}, {"uid": "github/yqiuu/starduster", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/starduster", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/starduster"}, {"uid": "github/alixlam/fmristroke", "html_url": "https://rseng.github.io/software/repository/github/alixlam/fmristroke", "api_url": "https://rseng.github.io/software/api/repos/github/alixlam/fmristroke"}, {"uid": "github/mdsufz/MuDoGeR", "html_url": "https://rseng.github.io/software/repository/github/mdsufz/MuDoGeR", "api_url": "https://rseng.github.io/software/api/repos/github/mdsufz/MuDoGeR"}, {"uid": "github/htjb/globalemu", "html_url": "https://rseng.github.io/software/repository/github/htjb/globalemu", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/globalemu"}, {"uid": "github/htjb/margarine", "html_url": "https://rseng.github.io/software/repository/github/htjb/margarine", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/margarine"}, {"uid": "github/htjb/maxsmooth", "html_url": "https://rseng.github.io/software/repository/github/htjb/maxsmooth", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/maxsmooth"}, {"uid": "github/klee/klee", "html_url": "https://rseng.github.io/software/repository/github/klee/klee", "api_url": "https://rseng.github.io/software/api/repos/github/klee/klee"}, {"uid": "github/oscaribv/citlalicue", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/citlalicue", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/citlalicue"}, {"uid": "github/oscaribv/pyaneti", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/pyaneti", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/pyaneti"}, {"uid": "github/oscaribv/exotrending", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/exotrending", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/exotrending"}, {"uid": "github/tcallister/autoregressive-bbh-inference", "html_url": "https://rseng.github.io/software/repository/github/tcallister/autoregressive-bbh-inference", "api_url": "https://rseng.github.io/software/api/repos/github/tcallister/autoregressive-bbh-inference"}, {"uid": "github/PNNL-m-q/mza", "html_url": "https://rseng.github.io/software/repository/github/PNNL-m-q/mza", "api_url": "https://rseng.github.io/software/api/repos/github/PNNL-m-q/mza"}, {"uid": "github/PopovIILab/KrakenParser", "html_url": "https://rseng.github.io/software/repository/github/PopovIILab/KrakenParser", "api_url": "https://rseng.github.io/software/api/repos/github/PopovIILab/KrakenParser"}, {"uid": "github/eggnogdb/eggnog-mapper", "html_url": "https://rseng.github.io/software/repository/github/eggnogdb/eggnog-mapper", "api_url": "https://rseng.github.io/software/api/repos/github/eggnogdb/eggnog-mapper"}, {"uid": "github/0xCoto/Virgo", "html_url": "https://rseng.github.io/software/repository/github/0xCoto/Virgo", "api_url": "https://rseng.github.io/software/api/repos/github/0xCoto/Virgo"}, {"uid": "github/jumphone/inferloop", "html_url": "https://rseng.github.io/software/repository/github/jumphone/inferloop", "api_url": "https://rseng.github.io/software/api/repos/github/jumphone/inferloop"}, {"uid": "github/aztekas-code/aztekas-main", "html_url": "https://rseng.github.io/software/repository/github/aztekas-code/aztekas-main", "api_url": "https://rseng.github.io/software/api/repos/github/aztekas-code/aztekas-main"}, {"uid": "github/AncientNLP/potnia", "html_url": "https://rseng.github.io/software/repository/github/AncientNLP/potnia", "api_url": "https://rseng.github.io/software/api/repos/github/AncientNLP/potnia"}, {"uid": "github/maddataanalyst/hextractor", "html_url": "https://rseng.github.io/software/repository/github/maddataanalyst/hextractor", "api_url": "https://rseng.github.io/software/api/repos/github/maddataanalyst/hextractor"}, {"uid": "github/hyperopt/hyperopt", "html_url": "https://rseng.github.io/software/repository/github/hyperopt/hyperopt", "api_url": "https://rseng.github.io/software/api/repos/github/hyperopt/hyperopt"}, {"uid": "github/AP6YC/AdaptiveResonance.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/AdaptiveResonance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/AdaptiveResonance.jl"}, {"uid": "github/AP6YC/ClusterValidityIndices.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/ClusterValidityIndices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/ClusterValidityIndices.jl"}, {"uid": "github/BjoernBiltzinger/pyspi", "html_url": "https://rseng.github.io/software/repository/github/BjoernBiltzinger/pyspi", "api_url": "https://rseng.github.io/software/api/repos/github/BjoernBiltzinger/pyspi"}, {"uid": "github/Imperial-visualizations/Physics-Visualizations", "html_url": "https://rseng.github.io/software/repository/github/Imperial-visualizations/Physics-Visualizations", "api_url": "https://rseng.github.io/software/api/repos/github/Imperial-visualizations/Physics-Visualizations"}, {"uid": "github/WBK-Robotics/pybullet_industrial", "html_url": "https://rseng.github.io/software/repository/github/WBK-Robotics/pybullet_industrial", "api_url": "https://rseng.github.io/software/api/repos/github/WBK-Robotics/pybullet_industrial"}, {"uid": "github/AemulusProject/bias_emulator", "html_url": "https://rseng.github.io/software/repository/github/AemulusProject/bias_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/AemulusProject/bias_emulator"}, {"uid": "github/FastMLC/fMLC", "html_url": "https://rseng.github.io/software/repository/github/FastMLC/fMLC", "api_url": "https://rseng.github.io/software/api/repos/github/FastMLC/fMLC"}, {"uid": "github/Pizzuti92/MG-MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/github/Pizzuti92/MG-MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/github/Pizzuti92/MG-MAMPOSSt"}, {"uid": "github/rae-holcomb/SpinSpotter", "html_url": "https://rseng.github.io/software/repository/github/rae-holcomb/SpinSpotter", "api_url": "https://rseng.github.io/software/api/repos/github/rae-holcomb/SpinSpotter"}, {"uid": "github/ajosephy/Clustering", "html_url": "https://rseng.github.io/software/repository/github/ajosephy/Clustering", "api_url": "https://rseng.github.io/software/api/repos/github/ajosephy/Clustering"}, {"uid": "github/ashleyblawas/respdetect", "html_url": "https://rseng.github.io/software/repository/github/ashleyblawas/respdetect", "api_url": "https://rseng.github.io/software/api/repos/github/ashleyblawas/respdetect"}, {"uid": "github/BU-ISCIII/taranis", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/taranis", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/taranis"}, {"uid": "github/BU-ISCIII/plasmidID", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/plasmidID", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/plasmidID"}, {"uid": "github/BU-ISCIII/iSkyLIMS", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/iSkyLIMS", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/iSkyLIMS"}, {"uid": "github/cpiaulet/smint", "html_url": "https://rseng.github.io/software/repository/github/cpiaulet/smint", "api_url": "https://rseng.github.io/software/api/repos/github/cpiaulet/smint"}, {"uid": "github/spexod/iSLAT", "html_url": "https://rseng.github.io/software/repository/github/spexod/iSLAT", "api_url": "https://rseng.github.io/software/api/repos/github/spexod/iSLAT"}, {"uid": "github/PhaseTracer/PhaseTracer", "html_url": "https://rseng.github.io/software/repository/github/PhaseTracer/PhaseTracer", "api_url": "https://rseng.github.io/software/api/repos/github/PhaseTracer/PhaseTracer"}, {"uid": "github/PEREGRINE-GW/saqqara", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/saqqara", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/saqqara"}, {"uid": "github/PEREGRINE-GW/peregrine", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/peregrine", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/peregrine"}, {"uid": "github/brainets/frites", "html_url": "https://rseng.github.io/software/repository/github/brainets/frites", "api_url": "https://rseng.github.io/software/api/repos/github/brainets/frites"}, {"uid": "github/miguelcarcamov/csromer", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/csromer", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/csromer"}, {"uid": "github/miguelcarcamov/gpuvmem", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/gpuvmem", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/gpuvmem"}, {"uid": "github/markmbaum/GEOCLIM.jl", "html_url": "https://rseng.github.io/software/repository/github/markmbaum/GEOCLIM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/markmbaum/GEOCLIM.jl"}, {"uid": "github/narunlifescience/runcircos-gui", "html_url": "https://rseng.github.io/software/repository/github/narunlifescience/runcircos-gui", "api_url": "https://rseng.github.io/software/api/repos/github/narunlifescience/runcircos-gui"}, {"uid": "github/mind-inria/mri-nufft", "html_url": "https://rseng.github.io/software/repository/github/mind-inria/mri-nufft", "api_url": "https://rseng.github.io/software/api/repos/github/mind-inria/mri-nufft"}, {"uid": "github/snowformatics/macrobot", "html_url": "https://rseng.github.io/software/repository/github/snowformatics/macrobot", "api_url": "https://rseng.github.io/software/api/repos/github/snowformatics/macrobot"}, {"uid": "github/pennsignals/chime", "html_url": "https://rseng.github.io/software/repository/github/pennsignals/chime", "api_url": "https://rseng.github.io/software/api/repos/github/pennsignals/chime"}, {"uid": "github/KULL-Centre/DEERpredict", "html_url": "https://rseng.github.io/software/repository/github/KULL-Centre/DEERpredict", "api_url": "https://rseng.github.io/software/api/repos/github/KULL-Centre/DEERpredict"}, {"uid": "github/scipy/scipy", "html_url": "https://rseng.github.io/software/repository/github/scipy/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/scipy/scipy"}, {"uid": "github/munich-quantum-toolkit/core", "html_url": "https://rseng.github.io/software/repository/github/munich-quantum-toolkit/core", "api_url": "https://rseng.github.io/software/api/repos/github/munich-quantum-toolkit/core"}, {"uid": "github/winger/hawking_net", "html_url": "https://rseng.github.io/software/repository/github/winger/hawking_net", "api_url": "https://rseng.github.io/software/api/repos/github/winger/hawking_net"}, {"uid": "github/tresoldi/ngesh", "html_url": "https://rseng.github.io/software/repository/github/tresoldi/ngesh", "api_url": "https://rseng.github.io/software/api/repos/github/tresoldi/ngesh"}, {"uid": "github/Junwu302/HiFun", "html_url": "https://rseng.github.io/software/repository/github/Junwu302/HiFun", "api_url": "https://rseng.github.io/software/api/repos/github/Junwu302/HiFun"}, {"uid": "github/iipharma/pharmamind-molminer", "html_url": "https://rseng.github.io/software/repository/github/iipharma/pharmamind-molminer", "api_url": "https://rseng.github.io/software/api/repos/github/iipharma/pharmamind-molminer"}, {"uid": "github/jGetMove/jGetMove", "html_url": "https://rseng.github.io/software/repository/github/jGetMove/jGetMove", "api_url": "https://rseng.github.io/software/api/repos/github/jGetMove/jGetMove"}, {"uid": "github/insilico/cncv", "html_url": "https://rseng.github.io/software/repository/github/insilico/cncv", "api_url": "https://rseng.github.io/software/api/repos/github/insilico/cncv"}, {"uid": "github/PatrickJTaylor/pengWann", "html_url": "https://rseng.github.io/software/repository/github/PatrickJTaylor/pengWann", "api_url": "https://rseng.github.io/software/api/repos/github/PatrickJTaylor/pengWann"}, {"uid": "github/patscott/gambit_1.3", "html_url": "https://rseng.github.io/software/repository/github/patscott/gambit_1.3", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/gambit_1.3"}, {"uid": "github/patscott/ddcalc", "html_url": "https://rseng.github.io/software/repository/github/patscott/ddcalc", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/ddcalc"}, {"uid": "github/patscott/pippi", "html_url": "https://rseng.github.io/software/repository/github/patscott/pippi", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/pippi"}, {"uid": "github/AprilYuge/ResPAN", "html_url": "https://rseng.github.io/software/repository/github/AprilYuge/ResPAN", "api_url": "https://rseng.github.io/software/api/repos/github/AprilYuge/ResPAN"}, {"uid": "github/shinichiroando/sashimi-c", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-c", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-c"}, {"uid": "github/shinichiroando/sashimi-w", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-w", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-w"}, {"uid": "github/freqtrade/freqtrade", "html_url": "https://rseng.github.io/software/repository/github/freqtrade/freqtrade", "api_url": "https://rseng.github.io/software/api/repos/github/freqtrade/freqtrade"}, {"uid": "github/danielkoll/PyRADS", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/PyRADS", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/PyRADS"}, {"uid": "github/danielkoll/tidally-locked-coordinates", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/tidally-locked-coordinates", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/tidally-locked-coordinates"}, {"uid": "github/sina-cb/Tn-seqExplorer", "html_url": "https://rseng.github.io/software/repository/github/sina-cb/Tn-seqExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/sina-cb/Tn-seqExplorer"}, {"uid": "github/gijut/gnucash", "html_url": "https://rseng.github.io/software/repository/github/gijut/gnucash", "api_url": "https://rseng.github.io/software/api/repos/github/gijut/gnucash"}, {"uid": "github/FZJ-PGI-12/QAOA.jl", "html_url": "https://rseng.github.io/software/repository/github/FZJ-PGI-12/QAOA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-PGI-12/QAOA.jl"}, {"uid": "github/dpalmasan/TRUNAJOD2.0", "html_url": "https://rseng.github.io/software/repository/github/dpalmasan/TRUNAJOD2.0", "api_url": "https://rseng.github.io/software/api/repos/github/dpalmasan/TRUNAJOD2.0"}, {"uid": "github/afarahi/PoPE", "html_url": "https://rseng.github.io/software/repository/github/afarahi/PoPE", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/PoPE"}, {"uid": "github/afarahi/kllr", "html_url": "https://rseng.github.io/software/repository/github/afarahi/kllr", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/kllr"}, {"uid": "github/afarahi/tatter", "html_url": "https://rseng.github.io/software/repository/github/afarahi/tatter", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/tatter"}, {"uid": "github/sims-lab/CapCruncher", "html_url": "https://rseng.github.io/software/repository/github/sims-lab/CapCruncher", "api_url": "https://rseng.github.io/software/api/repos/github/sims-lab/CapCruncher"}, {"uid": "github/pirl-unc/ace", "html_url": "https://rseng.github.io/software/repository/github/pirl-unc/ace", "api_url": "https://rseng.github.io/software/api/repos/github/pirl-unc/ace"}, {"uid": "github/caselawanalytics/CaseLawAnalytics", "html_url": "https://rseng.github.io/software/repository/github/caselawanalytics/CaseLawAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/caselawanalytics/CaseLawAnalytics"}, {"uid": "github/r-spatialecology/shar", "html_url": "https://rseng.github.io/software/repository/github/r-spatialecology/shar", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatialecology/shar"}, {"uid": "github/nvanalfen/halotools", "html_url": "https://rseng.github.io/software/repository/github/nvanalfen/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/nvanalfen/halotools"}, {"uid": "github/BrockWW/BubbleFindingAlgorithm", "html_url": "https://rseng.github.io/software/repository/github/BrockWW/BubbleFindingAlgorithm", "api_url": "https://rseng.github.io/software/api/repos/github/BrockWW/BubbleFindingAlgorithm"}, {"uid": "github/UoMMIB/TFBMiner", "html_url": "https://rseng.github.io/software/repository/github/UoMMIB/TFBMiner", "api_url": "https://rseng.github.io/software/api/repos/github/UoMMIB/TFBMiner"}, {"uid": "github/ncbi/igblast", "html_url": "https://rseng.github.io/software/repository/github/ncbi/igblast", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/igblast"}, {"uid": "github/ncbi/SKESA", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SKESA", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SKESA"}, {"uid": "github/ncbi/sra-tools", "html_url": "https://rseng.github.io/software/repository/github/ncbi/sra-tools", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/sra-tools"}, {"uid": "github/ncbi/ncbi-vdb", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ncbi-vdb", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ncbi-vdb"}, {"uid": "github/ncbi/TPMCalculator", "html_url": "https://rseng.github.io/software/repository/github/ncbi/TPMCalculator", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/TPMCalculator"}, {"uid": "github/ncbi/datasets", "html_url": "https://rseng.github.io/software/repository/github/ncbi/datasets", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/datasets"}, {"uid": "github/ncbi/ngs", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ngs", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ngs"}, {"uid": "github/ncbi/SRPRISM", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SRPRISM", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SRPRISM"}, {"uid": "github/ncbi/BAMscale", "html_url": "https://rseng.github.io/software/repository/github/ncbi/BAMscale", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/BAMscale"}, {"uid": "github/ncbi/vadr", "html_url": "https://rseng.github.io/software/repository/github/ncbi/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/vadr"}, {"uid": "github/auckland-cosmo/interp-mc", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/interp-mc", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/interp-mc"}, {"uid": "github/auckland-cosmo/defrost-mpi", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/defrost-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/defrost-mpi"}, {"uid": "github/auckland-cosmo/PyUltraLight", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/PyUltraLight", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/PyUltraLight"}, {"uid": "github/research-software-directory/research-software-directory", "html_url": "https://rseng.github.io/software/repository/github/research-software-directory/research-software-directory", "api_url": "https://rseng.github.io/software/api/repos/github/research-software-directory/research-software-directory"}, {"uid": "github/nutjunkie/IQmol", "html_url": "https://rseng.github.io/software/repository/github/nutjunkie/IQmol", "api_url": "https://rseng.github.io/software/api/repos/github/nutjunkie/IQmol"}, {"uid": "github/weecology/retriever", "html_url": "https://rseng.github.io/software/repository/github/weecology/retriever", "api_url": "https://rseng.github.io/software/api/repos/github/weecology/retriever"}, {"uid": "github/alstat/ALUES", "html_url": "https://rseng.github.io/software/repository/github/alstat/ALUES", "api_url": "https://rseng.github.io/software/api/repos/github/alstat/ALUES"}, {"uid": "github/yuguangchen1/KcwiKit", "html_url": "https://rseng.github.io/software/repository/github/yuguangchen1/KcwiKit", "api_url": "https://rseng.github.io/software/api/repos/github/yuguangchen1/KcwiKit"}, {"uid": "github/occupationMeasurement/occupationMeasurement", "html_url": "https://rseng.github.io/software/repository/github/occupationMeasurement/occupationMeasurement", "api_url": "https://rseng.github.io/software/api/repos/github/occupationMeasurement/occupationMeasurement"}, {"uid": "github/PhilippJunk/homelette", "html_url": "https://rseng.github.io/software/repository/github/PhilippJunk/homelette", "api_url": "https://rseng.github.io/software/api/repos/github/PhilippJunk/homelette"}, {"uid": "github/PfizerRD/sit2standpy", "html_url": "https://rseng.github.io/software/repository/github/PfizerRD/sit2standpy", "api_url": "https://rseng.github.io/software/api/repos/github/PfizerRD/sit2standpy"}, {"uid": "github/hyriver/hysetter", "html_url": "https://rseng.github.io/software/repository/github/hyriver/hysetter", "api_url": "https://rseng.github.io/software/api/repos/github/hyriver/hysetter"}, {"uid": "github/CM2S/piglot", "html_url": "https://rseng.github.io/software/repository/github/CM2S/piglot", "api_url": "https://rseng.github.io/software/api/repos/github/CM2S/piglot"}, {"uid": "github/lucatelli/morphen", "html_url": "https://rseng.github.io/software/repository/github/lucatelli/morphen", "api_url": "https://rseng.github.io/software/api/repos/github/lucatelli/morphen"}, {"uid": "github/bioturing/hera", "html_url": "https://rseng.github.io/software/repository/github/bioturing/hera", "api_url": "https://rseng.github.io/software/api/repos/github/bioturing/hera"}, {"uid": "github/davideamato/NAPLES", "html_url": "https://rseng.github.io/software/repository/github/davideamato/NAPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davideamato/NAPLES"}, {"uid": "github/thomas0809/MolScribe", "html_url": "https://rseng.github.io/software/repository/github/thomas0809/MolScribe", "api_url": "https://rseng.github.io/software/api/repos/github/thomas0809/MolScribe"}, {"uid": "github/matthiasdemuzere/w2w", "html_url": "https://rseng.github.io/software/repository/github/matthiasdemuzere/w2w", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasdemuzere/w2w"}, {"uid": "github/sstadick/perbase", "html_url": "https://rseng.github.io/software/repository/github/sstadick/perbase", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/perbase"}, {"uid": "github/sstadick/crabz", "html_url": "https://rseng.github.io/software/repository/github/sstadick/crabz", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/crabz"}, {"uid": "github/fxwiegand/predictosaurus", "html_url": "https://rseng.github.io/software/repository/github/fxwiegand/predictosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/fxwiegand/predictosaurus"}, {"uid": "github/RainthunderWYL/LoRD", "html_url": "https://rseng.github.io/software/repository/github/RainthunderWYL/LoRD", "api_url": "https://rseng.github.io/software/api/repos/github/RainthunderWYL/LoRD"}, {"uid": "github/David-McKenna/udpPacketManager", "html_url": "https://rseng.github.io/software/repository/github/David-McKenna/udpPacketManager", "api_url": "https://rseng.github.io/software/api/repos/github/David-McKenna/udpPacketManager"}, {"uid": "github/NctuICLab/PredCRP", "html_url": "https://rseng.github.io/software/repository/github/NctuICLab/PredCRP", "api_url": "https://rseng.github.io/software/api/repos/github/NctuICLab/PredCRP"}, {"uid": "github/QuantEcon/QuantEcon.py", "html_url": "https://rseng.github.io/software/repository/github/QuantEcon/QuantEcon.py", "api_url": "https://rseng.github.io/software/api/repos/github/QuantEcon/QuantEcon.py"}, {"uid": "github/kim8517/RVSNUpy", "html_url": "https://rseng.github.io/software/repository/github/kim8517/RVSNUpy", "api_url": "https://rseng.github.io/software/api/repos/github/kim8517/RVSNUpy"}, {"uid": "github/sevenstarknight/VariableStarAnalysis", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/VariableStarAnalysis", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/VariableStarAnalysis"}, {"uid": "github/sevenstarknight/SSMM", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/SSMM", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/SSMM"}, {"uid": "github/sevenstarknight/OCDetector", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/OCDetector", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/OCDetector"}, {"uid": "github/sevenstarknight/LINEARSupervisedClassification", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/LINEARSupervisedClassification", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/LINEARSupervisedClassification"}, {"uid": "github/davidemms/OrthoFinder", "html_url": "https://rseng.github.io/software/repository/github/davidemms/OrthoFinder", "api_url": "https://rseng.github.io/software/api/repos/github/davidemms/OrthoFinder"}, {"uid": "github/lyf222/alpconv", "html_url": "https://rseng.github.io/software/repository/github/lyf222/alpconv", "api_url": "https://rseng.github.io/software/api/repos/github/lyf222/alpconv"}, {"uid": "github/jpierel14/snsed", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/snsed", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/snsed"}, {"uid": "github/jpierel14/sntd", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/sntd", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/sntd"}, {"uid": "github/atomneb/AtomNeb-py", "html_url": "https://rseng.github.io/software/repository/github/atomneb/AtomNeb-py", "api_url": "https://rseng.github.io/software/api/repos/github/atomneb/AtomNeb-py"}, {"uid": "github/FredHutch/SEACR", "html_url": "https://rseng.github.io/software/repository/github/FredHutch/SEACR", "api_url": "https://rseng.github.io/software/api/repos/github/FredHutch/SEACR"}, {"uid": "github/aconley/simple_cosfitter", "html_url": "https://rseng.github.io/software/repository/github/aconley/simple_cosfitter", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/simple_cosfitter"}, {"uid": "github/aconley/mbb_emcee", "html_url": "https://rseng.github.io/software/repository/github/aconley/mbb_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/mbb_emcee"}, {"uid": "github/mzy2240/ESA", "html_url": "https://rseng.github.io/software/repository/github/mzy2240/ESA", "api_url": "https://rseng.github.io/software/api/repos/github/mzy2240/ESA"}, {"uid": "github/Martin-Fahrenberger/GTestimate", "html_url": "https://rseng.github.io/software/repository/github/Martin-Fahrenberger/GTestimate", "api_url": "https://rseng.github.io/software/api/repos/github/Martin-Fahrenberger/GTestimate"}, {"uid": "github/cdanielmachado/carveme", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/carveme", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/carveme"}, {"uid": "github/cdanielmachado/reframed", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/reframed", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/reframed"}, {"uid": "github/cosmoinin/MGPT", "html_url": "https://rseng.github.io/software/repository/github/cosmoinin/MGPT", "api_url": "https://rseng.github.io/software/api/repos/github/cosmoinin/MGPT"}, {"uid": "github/otvam/pypeec", "html_url": "https://rseng.github.io/software/repository/github/otvam/pypeec", "api_url": "https://rseng.github.io/software/api/repos/github/otvam/pypeec"}, {"uid": "github/laristra/flecsph", "html_url": "https://rseng.github.io/software/repository/github/laristra/flecsph", "api_url": "https://rseng.github.io/software/api/repos/github/laristra/flecsph"}, {"uid": "github/comp-phys-marc/qasm-ts", "html_url": "https://rseng.github.io/software/repository/github/comp-phys-marc/qasm-ts", "api_url": "https://rseng.github.io/software/api/repos/github/comp-phys-marc/qasm-ts"}, {"uid": "github/prioritizr/wdpar", "html_url": "https://rseng.github.io/software/repository/github/prioritizr/wdpar", "api_url": "https://rseng.github.io/software/api/repos/github/prioritizr/wdpar"}, {"uid": "github/BiomedSciAI/fuse-med-ml", "html_url": "https://rseng.github.io/software/repository/github/BiomedSciAI/fuse-med-ml", "api_url": "https://rseng.github.io/software/api/repos/github/BiomedSciAI/fuse-med-ml"}, {"uid": "github/craddis1/CosmoWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/CosmoWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/CosmoWAP"}, {"uid": "github/craddis1/MathWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/MathWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/MathWAP"}, {"uid": "github/jakeown/astroclover", "html_url": "https://rseng.github.io/software/repository/github/jakeown/astroclover", "api_url": "https://rseng.github.io/software/api/repos/github/jakeown/astroclover"}, {"uid": "github/Jammy2211/PyAutoLens", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoLens", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoLens"}, {"uid": "github/Jammy2211/PyAutoGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoGalaxy"}, {"uid": "github/Jammy2211/PyAutoCTI", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoCTI", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoCTI"}, {"uid": "github/jradcliffe5/multi_self_cal", "html_url": "https://rseng.github.io/software/repository/github/jradcliffe5/multi_self_cal", "api_url": "https://rseng.github.io/software/api/repos/github/jradcliffe5/multi_self_cal"}, {"uid": "github/junkoda/cola_halo", "html_url": "https://rseng.github.io/software/repository/github/junkoda/cola_halo", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/cola_halo"}, {"uid": "github/junkoda/sidm-nbody", "html_url": "https://rseng.github.io/software/repository/github/junkoda/sidm-nbody", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/sidm-nbody"}, {"uid": "github/pmoulos/metaseqR2", "html_url": "https://rseng.github.io/software/repository/github/pmoulos/metaseqR2", "api_url": "https://rseng.github.io/software/api/repos/github/pmoulos/metaseqR2"}, {"uid": "github/stefanoMP/massiveGST", "html_url": "https://rseng.github.io/software/repository/github/stefanoMP/massiveGST", "api_url": "https://rseng.github.io/software/api/repos/github/stefanoMP/massiveGST"}, {"uid": "github/mcataneo/mochi_class_public", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/mochi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/mochi_class_public"}, {"uid": "github/mcataneo/pyLDT-cosmo", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/pyLDT-cosmo", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/pyLDT-cosmo"}, {"uid": "github/EdoardoCarlesi/cmbeasy", "html_url": "https://rseng.github.io/software/repository/github/EdoardoCarlesi/cmbeasy", "api_url": "https://rseng.github.io/software/api/repos/github/EdoardoCarlesi/cmbeasy"}, {"uid": "github/PopGenClustering/Clumppling", "html_url": "https://rseng.github.io/software/repository/github/PopGenClustering/Clumppling", "api_url": "https://rseng.github.io/software/api/repos/github/PopGenClustering/Clumppling"}, {"uid": "github/jmsdsouzaPhD/GWDALI", "html_url": "https://rseng.github.io/software/repository/github/jmsdsouzaPhD/GWDALI", "api_url": "https://rseng.github.io/software/api/repos/github/jmsdsouzaPhD/GWDALI"}, {"uid": "github/johentsch/ms3", "html_url": "https://rseng.github.io/software/repository/github/johentsch/ms3", "api_url": "https://rseng.github.io/software/api/repos/github/johentsch/ms3"}, {"uid": "github/flintproject/Flint", "html_url": "https://rseng.github.io/software/repository/github/flintproject/Flint", "api_url": "https://rseng.github.io/software/api/repos/github/flintproject/Flint"}, {"uid": "github/ekaterinailin/AltaiPony", "html_url": "https://rseng.github.io/software/repository/github/ekaterinailin/AltaiPony", "api_url": "https://rseng.github.io/software/api/repos/github/ekaterinailin/AltaiPony"}, {"uid": "github/LabLaskin/MSIGen", "html_url": "https://rseng.github.io/software/repository/github/LabLaskin/MSIGen", "api_url": "https://rseng.github.io/software/api/repos/github/LabLaskin/MSIGen"}, {"uid": "github/wbalmer/backtracks", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtracks", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtracks"}, {"uid": "github/wbalmer/backtrack", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtrack", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtrack"}, {"uid": "github/quantling/pyndl", "html_url": "https://rseng.github.io/software/repository/github/quantling/pyndl", "api_url": "https://rseng.github.io/software/api/repos/github/quantling/pyndl"}, {"uid": "github/turbo-sim/TurboFlow", "html_url": "https://rseng.github.io/software/repository/github/turbo-sim/TurboFlow", "api_url": "https://rseng.github.io/software/api/repos/github/turbo-sim/TurboFlow"}, {"uid": "github/tombisho/dsSyntheticClient", "html_url": "https://rseng.github.io/software/repository/github/tombisho/dsSyntheticClient", "api_url": "https://rseng.github.io/software/api/repos/github/tombisho/dsSyntheticClient"}, {"uid": "github/pmkruyen/dearscholar", "html_url": "https://rseng.github.io/software/repository/github/pmkruyen/dearscholar", "api_url": "https://rseng.github.io/software/api/repos/github/pmkruyen/dearscholar"}, {"uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "html_url": "https://rseng.github.io/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "api_url": "https://rseng.github.io/software/api/repos/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys"}, {"uid": "github/manchunyeung/wolensing", "html_url": "https://rseng.github.io/software/repository/github/manchunyeung/wolensing", "api_url": "https://rseng.github.io/software/api/repos/github/manchunyeung/wolensing"}, {"uid": "github/gkulkarni/QLF", "html_url": "https://rseng.github.io/software/repository/github/gkulkarni/QLF", "api_url": "https://rseng.github.io/software/api/repos/github/gkulkarni/QLF"}, {"uid": "github/EGaraldi/corecon", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/corecon", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/corecon"}, {"uid": "github/EGaraldi/ZInCo", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/ZInCo", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/ZInCo"}, {"uid": "github/Shamrock-code/Shamrock", "html_url": "https://rseng.github.io/software/repository/github/Shamrock-code/Shamrock", "api_url": "https://rseng.github.io/software/api/repos/github/Shamrock-code/Shamrock"}, {"uid": "github/awsteiner/bamr", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/bamr", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/bamr"}, {"uid": "github/awsteiner/o2scl", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/o2scl", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/o2scl"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects"}, {"uid": "github/basehc/IPEV", "html_url": "https://rseng.github.io/software/repository/github/basehc/IPEV", "api_url": "https://rseng.github.io/software/api/repos/github/basehc/IPEV"}, {"uid": "github/CSSEGISandData/COVID-19", "html_url": "https://rseng.github.io/software/repository/github/CSSEGISandData/COVID-19", "api_url": "https://rseng.github.io/software/api/repos/github/CSSEGISandData/COVID-19"}, {"uid": "github/JuliaQuantumControl/GRAPE.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQuantumControl/GRAPE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQuantumControl/GRAPE.jl"}, {"uid": "github/LinkedEarth/pylipd", "html_url": "https://rseng.github.io/software/repository/github/LinkedEarth/pylipd", "api_url": "https://rseng.github.io/software/api/repos/github/LinkedEarth/pylipd"}, {"uid": "github/BradGreig/21CMMC", "html_url": "https://rseng.github.io/software/repository/github/BradGreig/21CMMC", "api_url": "https://rseng.github.io/software/api/repos/github/BradGreig/21CMMC"}, {"uid": "github/pjedge/longshot", "html_url": "https://rseng.github.io/software/repository/github/pjedge/longshot", "api_url": "https://rseng.github.io/software/api/repos/github/pjedge/longshot"}, {"uid": "github/omerveille/VSMOD", "html_url": "https://rseng.github.io/software/repository/github/omerveille/VSMOD", "api_url": "https://rseng.github.io/software/api/repos/github/omerveille/VSMOD"}, {"uid": "github/jdidion/atropos", "html_url": "https://rseng.github.io/software/repository/github/jdidion/atropos", "api_url": "https://rseng.github.io/software/api/repos/github/jdidion/atropos"}, {"uid": "github/dr-joe-wirth/primerForge", "html_url": "https://rseng.github.io/software/repository/github/dr-joe-wirth/primerForge", "api_url": "https://rseng.github.io/software/api/repos/github/dr-joe-wirth/primerForge"}, {"uid": "github/uedaLabR/nanoDoc", "html_url": "https://rseng.github.io/software/repository/github/uedaLabR/nanoDoc", "api_url": "https://rseng.github.io/software/api/repos/github/uedaLabR/nanoDoc"}, {"uid": "github/Yu-Group/simChef", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/simChef", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/simChef"}, {"uid": "github/Yu-Group/veridical-flow", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/veridical-flow", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/veridical-flow"}, {"uid": "github/phac-nml/biohansel", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/biohansel", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/biohansel"}, {"uid": "github/phac-nml/staramr", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/staramr", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/staramr"}, {"uid": "github/phac-nml/mob-suite", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/mob-suite", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/mob-suite"}, {"uid": "github/snugel/cas-offinder", "html_url": "https://rseng.github.io/software/repository/github/snugel/cas-offinder", "api_url": "https://rseng.github.io/software/api/repos/github/snugel/cas-offinder"}, {"uid": "github/fruzsinaagocs/oscode", "html_url": "https://rseng.github.io/software/repository/github/fruzsinaagocs/oscode", "api_url": "https://rseng.github.io/software/api/repos/github/fruzsinaagocs/oscode"}, {"uid": "github/miniufo/xinvert", "html_url": "https://rseng.github.io/software/repository/github/miniufo/xinvert", "api_url": "https://rseng.github.io/software/api/repos/github/miniufo/xinvert"}, {"uid": "github/champsproject/ldds", "html_url": "https://rseng.github.io/software/repository/github/champsproject/ldds", "api_url": "https://rseng.github.io/software/api/repos/github/champsproject/ldds"}, {"uid": "github/mglodge/MANTA-Ray", "html_url": "https://rseng.github.io/software/repository/github/mglodge/MANTA-Ray", "api_url": "https://rseng.github.io/software/api/repos/github/mglodge/MANTA-Ray"}, {"uid": "github/Fenyutanchan/solar-vSI", "html_url": "https://rseng.github.io/software/repository/github/Fenyutanchan/solar-vSI", "api_url": "https://rseng.github.io/software/api/repos/github/Fenyutanchan/solar-vSI"}, {"uid": "github/abinit/abinit", "html_url": "https://rseng.github.io/software/repository/github/abinit/abinit", "api_url": "https://rseng.github.io/software/api/repos/github/abinit/abinit"}, {"uid": "github/jacob-long/jtools", "html_url": "https://rseng.github.io/software/repository/github/jacob-long/jtools", "api_url": "https://rseng.github.io/software/api/repos/github/jacob-long/jtools"}, {"uid": "github/christopher-vollmers/C3POa", "html_url": "https://rseng.github.io/software/repository/github/christopher-vollmers/C3POa", "api_url": "https://rseng.github.io/software/api/repos/github/christopher-vollmers/C3POa"}, {"uid": "github/IDEMSInternational/ExcelToShiny", "html_url": "https://rseng.github.io/software/repository/github/IDEMSInternational/ExcelToShiny", "api_url": "https://rseng.github.io/software/api/repos/github/IDEMSInternational/ExcelToShiny"}, {"uid": "github/sylabs/singularity", "html_url": "https://rseng.github.io/software/repository/github/sylabs/singularity", "api_url": "https://rseng.github.io/software/api/repos/github/sylabs/singularity"}, {"uid": "github/jdeast/EXOFASTv2", "html_url": "https://rseng.github.io/software/repository/github/jdeast/EXOFASTv2", "api_url": "https://rseng.github.io/software/api/repos/github/jdeast/EXOFASTv2"}, {"uid": "github/Nextomics/nextsv", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/nextsv", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/nextsv"}, {"uid": "github/Nextomics/NextDenovo", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/NextDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/NextDenovo"}, {"uid": "github/WhaleConnect/whaleconnect", "html_url": "https://rseng.github.io/software/repository/github/WhaleConnect/whaleconnect", "api_url": "https://rseng.github.io/software/api/repos/github/WhaleConnect/whaleconnect"}, {"uid": "github/aaryapatil/tapify", "html_url": "https://rseng.github.io/software/repository/github/aaryapatil/tapify", "api_url": "https://rseng.github.io/software/api/repos/github/aaryapatil/tapify"}, {"uid": "github/spiketools/spiketools", "html_url": "https://rseng.github.io/software/repository/github/spiketools/spiketools", "api_url": "https://rseng.github.io/software/api/repos/github/spiketools/spiketools"}, {"uid": "github/scwatts/fastspar", "html_url": "https://rseng.github.io/software/repository/github/scwatts/fastspar", "api_url": "https://rseng.github.io/software/api/repos/github/scwatts/fastspar"}, {"uid": "github/Beuth-Erdelt/DBMS-Benchmarker", "html_url": "https://rseng.github.io/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", "api_url": "https://rseng.github.io/software/api/repos/github/Beuth-Erdelt/DBMS-Benchmarker"}, {"uid": "github/tommyau/bamclipper", "html_url": "https://rseng.github.io/software/repository/github/tommyau/bamclipper", "api_url": "https://rseng.github.io/software/api/repos/github/tommyau/bamclipper"}, {"uid": "github/KALMUS-Color-Toolkit/KALMUS", "html_url": "https://rseng.github.io/software/repository/github/KALMUS-Color-Toolkit/KALMUS", "api_url": "https://rseng.github.io/software/api/repos/github/KALMUS-Color-Toolkit/KALMUS"}, {"uid": "github/numba/numba", "html_url": "https://rseng.github.io/software/repository/github/numba/numba", "api_url": "https://rseng.github.io/software/api/repos/github/numba/numba"}, {"uid": "github/rochoa85/NTDHealth_Forms", "html_url": "https://rseng.github.io/software/repository/github/rochoa85/NTDHealth_Forms", "api_url": "https://rseng.github.io/software/api/repos/github/rochoa85/NTDHealth_Forms"}, {"uid": "github/JuliaAI/Imbalance.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaAI/Imbalance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaAI/Imbalance.jl"}, {"uid": "github/tcollett/LensPop", "html_url": "https://rseng.github.io/software/repository/github/tcollett/LensPop", "api_url": "https://rseng.github.io/software/api/repos/github/tcollett/LensPop"}, {"uid": "github/OceanGenomics/mudskipper", "html_url": "https://rseng.github.io/software/repository/github/OceanGenomics/mudskipper", "api_url": "https://rseng.github.io/software/api/repos/github/OceanGenomics/mudskipper"}, {"uid": "github/gtonkinhill/fastbaps", "html_url": "https://rseng.github.io/software/repository/github/gtonkinhill/fastbaps", "api_url": "https://rseng.github.io/software/api/repos/github/gtonkinhill/fastbaps"}, {"uid": "github/Music-and-Culture-Technology-Lab/omnizart", "html_url": "https://rseng.github.io/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", "api_url": "https://rseng.github.io/software/api/repos/github/Music-and-Culture-Technology-Lab/omnizart"}, {"uid": "github/jmiramont/mcsm-benchs", "html_url": "https://rseng.github.io/software/repository/github/jmiramont/mcsm-benchs", "api_url": "https://rseng.github.io/software/api/repos/github/jmiramont/mcsm-benchs"}, {"uid": "github/basp-group/BUQO", "html_url": "https://rseng.github.io/software/repository/github/basp-group/BUQO", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/BUQO"}, {"uid": "github/basp-group/R2D2-SII", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-SII", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-SII"}, {"uid": "github/basp-group/R2D2-RI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-RI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-RI"}, {"uid": "github/basp-group/sopt", "html_url": "https://rseng.github.io/software/repository/github/basp-group/sopt", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/sopt"}, {"uid": "github/basp-group/purify", "html_url": "https://rseng.github.io/software/repository/github/basp-group/purify", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/purify"}, {"uid": "github/basp-group/Optical-Interferometry-Trilinear", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Optical-Interferometry-Trilinear", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Optical-Interferometry-Trilinear"}, {"uid": "github/basp-group/AIRI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/AIRI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/AIRI"}, {"uid": "github/basp-group/faceted-hypersara", "html_url": "https://rseng.github.io/software/repository/github/basp-group/faceted-hypersara", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/faceted-hypersara"}, {"uid": "github/basp-group/SARA-PPD", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-PPD", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-PPD"}, {"uid": "github/basp-group/SARA-dimensionality-reduction", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-dimensionality-reduction", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-dimensionality-reduction"}, {"uid": "github/basp-group/Puri-Psi", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Puri-Psi", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Puri-Psi"}, {"uid": "github/combine-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/combine-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/combine-lab/salmon"}, {"uid": "github/CodeEagle22/SIRITVIS", "html_url": "https://rseng.github.io/software/repository/github/CodeEagle22/SIRITVIS", "api_url": "https://rseng.github.io/software/api/repos/github/CodeEagle22/SIRITVIS"}, {"uid": "github/COSIMA/regional-mom6", "html_url": "https://rseng.github.io/software/repository/github/COSIMA/regional-mom6", "api_url": "https://rseng.github.io/software/api/repos/github/COSIMA/regional-mom6"}, {"uid": "github/moldyn/msmhelper", "html_url": "https://rseng.github.io/software/repository/github/moldyn/msmhelper", "api_url": "https://rseng.github.io/software/api/repos/github/moldyn/msmhelper"}, {"uid": "github/gui11aume/starcode", "html_url": "https://rseng.github.io/software/repository/github/gui11aume/starcode", "api_url": "https://rseng.github.io/software/api/repos/github/gui11aume/starcode"}, {"uid": "github/dkoboldt/varscan", "html_url": "https://rseng.github.io/software/repository/github/dkoboldt/varscan", "api_url": "https://rseng.github.io/software/api/repos/github/dkoboldt/varscan"}, {"uid": "github/jorisparet/partycls", "html_url": "https://rseng.github.io/software/repository/github/jorisparet/partycls", "api_url": "https://rseng.github.io/software/api/repos/github/jorisparet/partycls"}, {"uid": "github/VegeWaterDynamics/motrainer", "html_url": "https://rseng.github.io/software/repository/github/VegeWaterDynamics/motrainer", "api_url": "https://rseng.github.io/software/api/repos/github/VegeWaterDynamics/motrainer"}, {"uid": "github/ZhangGroup-MITChemistry/OpenNucleome", "html_url": "https://rseng.github.io/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", "api_url": "https://rseng.github.io/software/api/repos/github/ZhangGroup-MITChemistry/OpenNucleome"}, {"uid": "github/ridgelab/rampAtlas", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/rampAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/rampAtlas"}, {"uid": "github/ridgelab/ExtRampOnline", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/ExtRampOnline", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/ExtRampOnline"}, {"uid": "github/dhubber/seren", "html_url": "https://rseng.github.io/software/repository/github/dhubber/seren", "api_url": "https://rseng.github.io/software/api/repos/github/dhubber/seren"}, {"uid": "github/labgem/PPanGGOLiN", "html_url": "https://rseng.github.io/software/repository/github/labgem/PPanGGOLiN", "api_url": "https://rseng.github.io/software/api/repos/github/labgem/PPanGGOLiN"}, {"uid": "github/VMBoehm/MADLens", "html_url": "https://rseng.github.io/software/repository/github/VMBoehm/MADLens", "api_url": "https://rseng.github.io/software/api/repos/github/VMBoehm/MADLens"}, {"uid": "github/mbillingr/libgdf", "html_url": "https://rseng.github.io/software/repository/github/mbillingr/libgdf", "api_url": "https://rseng.github.io/software/api/repos/github/mbillingr/libgdf"}, {"uid": "github/streamlit/streamlit", "html_url": "https://rseng.github.io/software/repository/github/streamlit/streamlit", "api_url": "https://rseng.github.io/software/api/repos/github/streamlit/streamlit"}, {"uid": "github/vembrane/vembrane", "html_url": "https://rseng.github.io/software/repository/github/vembrane/vembrane", "api_url": "https://rseng.github.io/software/api/repos/github/vembrane/vembrane"}, {"uid": "github/statgen/popscle", "html_url": "https://rseng.github.io/software/repository/github/statgen/popscle", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/popscle"}, {"uid": "github/statgen/Minimac4", "html_url": "https://rseng.github.io/software/repository/github/statgen/Minimac4", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/Minimac4"}, {"uid": "github/statgen/demuxlet", "html_url": "https://rseng.github.io/software/repository/github/statgen/demuxlet", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/demuxlet"}, {"uid": "github/vortex-exoplanet/VIP", "html_url": "https://rseng.github.io/software/repository/github/vortex-exoplanet/VIP", "api_url": "https://rseng.github.io/software/api/repos/github/vortex-exoplanet/VIP"}, {"uid": "github/jonotuke/BREADR", "html_url": "https://rseng.github.io/software/repository/github/jonotuke/BREADR", "api_url": "https://rseng.github.io/software/api/repos/github/jonotuke/BREADR"}, {"uid": "github/UM-PEPL/HallThruster.jl", "html_url": "https://rseng.github.io/software/repository/github/UM-PEPL/HallThruster.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UM-PEPL/HallThruster.jl"}, {"uid": "github/YaleTHz/nelly", "html_url": "https://rseng.github.io/software/repository/github/YaleTHz/nelly", "api_url": "https://rseng.github.io/software/api/repos/github/YaleTHz/nelly"}, {"uid": "github/msm550/DMATIS", "html_url": "https://rseng.github.io/software/repository/github/msm550/DMATIS", "api_url": "https://rseng.github.io/software/api/repos/github/msm550/DMATIS"}, {"uid": "github/ryanoelkers/DIA", "html_url": "https://rseng.github.io/software/repository/github/ryanoelkers/DIA", "api_url": "https://rseng.github.io/software/api/repos/github/ryanoelkers/DIA"}, {"uid": "github/scottleedavis/googleearthtoolbox", "html_url": "https://rseng.github.io/software/repository/github/scottleedavis/googleearthtoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/scottleedavis/googleearthtoolbox"}, {"uid": "github/davidkipping/MAH", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MAH", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MAH"}, {"uid": "github/davidkipping/MACULA", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MACULA", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MACULA"}, {"uid": "github/davidkipping/inversebeta", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/inversebeta", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/inversebeta"}, {"uid": "github/davidkipping/ECCSAMPLES", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/ECCSAMPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/ECCSAMPLES"}, {"uid": "github/davidkipping/flicker", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/flicker", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/flicker"}, {"uid": "github/davidkipping/LDC3", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/LDC3", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/LDC3"}, {"uid": "github/nathanaelbosch/ProbNumDiffEq.jl", "html_url": "https://rseng.github.io/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nathanaelbosch/ProbNumDiffEq.jl"}, {"uid": "github/aroffringa/aartfaac2ms", "html_url": "https://rseng.github.io/software/repository/github/aroffringa/aartfaac2ms", "api_url": "https://rseng.github.io/software/api/repos/github/aroffringa/aartfaac2ms"}, {"uid": "github/ARDG-NRAO/LibRA", "html_url": "https://rseng.github.io/software/repository/github/ARDG-NRAO/LibRA", "api_url": "https://rseng.github.io/software/api/repos/github/ARDG-NRAO/LibRA"}, {"uid": "github/domeckert/pyproffit", "html_url": "https://rseng.github.io/software/repository/github/domeckert/pyproffit", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/pyproffit"}, {"uid": "github/domeckert/xmm_simulator", "html_url": "https://rseng.github.io/software/repository/github/domeckert/xmm_simulator", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/xmm_simulator"}, {"uid": "github/domeckert/hydromass", "html_url": "https://rseng.github.io/software/repository/github/domeckert/hydromass", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/hydromass"}, {"uid": "github/mriener/gausspyplus", "html_url": "https://rseng.github.io/software/repository/github/mriener/gausspyplus", "api_url": "https://rseng.github.io/software/api/repos/github/mriener/gausspyplus"}, {"uid": "github/bodenlab/GRASP", "html_url": "https://rseng.github.io/software/repository/github/bodenlab/GRASP", "api_url": "https://rseng.github.io/software/api/repos/github/bodenlab/GRASP"}, {"uid": "github/ThomasMBury/ewstools", "html_url": "https://rseng.github.io/software/repository/github/ThomasMBury/ewstools", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasMBury/ewstools"}, {"uid": "github/xianggebenben/GraphSL", "html_url": "https://rseng.github.io/software/repository/github/xianggebenben/GraphSL", "api_url": "https://rseng.github.io/software/api/repos/github/xianggebenben/GraphSL"}, {"uid": "github/david-barnett/microViz", "html_url": "https://rseng.github.io/software/repository/github/david-barnett/microViz", "api_url": "https://rseng.github.io/software/api/repos/github/david-barnett/microViz"}, {"uid": "github/CQCL/qujax", "html_url": "https://rseng.github.io/software/repository/github/CQCL/qujax", "api_url": "https://rseng.github.io/software/api/repos/github/CQCL/qujax"}, {"uid": "github/zpliulab/GENELink", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GENELink", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GENELink"}, {"uid": "github/zpliulab/GeoBind", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GeoBind", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GeoBind"}, {"uid": "github/EbmeyerSt/GEnView", "html_url": "https://rseng.github.io/software/repository/github/EbmeyerSt/GEnView", "api_url": "https://rseng.github.io/software/api/repos/github/EbmeyerSt/GEnView"}, {"uid": "github/kpenev/poet", "html_url": "https://rseng.github.io/software/repository/github/kpenev/poet", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/poet"}, {"uid": "github/kpenev/AutoWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AutoWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AutoWISP"}, {"uid": "github/kpenev/AstroWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AstroWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AstroWISP"}, {"uid": "github/BlauGroup/RNMC", "html_url": "https://rseng.github.io/software/repository/github/BlauGroup/RNMC", "api_url": "https://rseng.github.io/software/api/repos/github/BlauGroup/RNMC"}, {"uid": "github/MultiQC/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/MultiQC/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/MultiQC/MultiQC"}, {"uid": "github/antonpannekoek/sunbather", "html_url": "https://rseng.github.io/software/repository/github/antonpannekoek/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/antonpannekoek/sunbather"}, {"uid": "github/ewatercycle/era5cli", "html_url": "https://rseng.github.io/software/repository/github/ewatercycle/era5cli", "api_url": "https://rseng.github.io/software/api/repos/github/ewatercycle/era5cli"}, {"uid": "github/levuvietphong/pyTCR", "html_url": "https://rseng.github.io/software/repository/github/levuvietphong/pyTCR", "api_url": "https://rseng.github.io/software/api/repos/github/levuvietphong/pyTCR"}, {"uid": "github/AlexMaraio/WeakLensingQML", "html_url": "https://rseng.github.io/software/repository/github/AlexMaraio/WeakLensingQML", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMaraio/WeakLensingQML"}, {"uid": "github/daniellefenech/SERPent", "html_url": "https://rseng.github.io/software/repository/github/daniellefenech/SERPent", "api_url": "https://rseng.github.io/software/api/repos/github/daniellefenech/SERPent"}, {"uid": "github/UM-KevinHe/surtvep", "html_url": "https://rseng.github.io/software/repository/github/UM-KevinHe/surtvep", "api_url": "https://rseng.github.io/software/api/repos/github/UM-KevinHe/surtvep"}, {"uid": "github/mrbell/fsclean", "html_url": "https://rseng.github.io/software/repository/github/mrbell/fsclean", "api_url": "https://rseng.github.io/software/api/repos/github/mrbell/fsclean"}, {"uid": "github/NeuralEnsemble/elephant", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/elephant", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/elephant"}, {"uid": "github/NeuralEnsemble/PyNN", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/PyNN", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/PyNN"}, {"uid": "github/pikarpov-LANL/Sapsan", "html_url": "https://rseng.github.io/software/repository/github/pikarpov-LANL/Sapsan", "api_url": "https://rseng.github.io/software/api/repos/github/pikarpov-LANL/Sapsan"}, {"uid": "github/MNiwano/Eclaire", "html_url": "https://rseng.github.io/software/repository/github/MNiwano/Eclaire", "api_url": "https://rseng.github.io/software/api/repos/github/MNiwano/Eclaire"}, {"uid": "github/cconroy20/alf", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/alf", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/alf"}, {"uid": "github/cconroy20/fsps", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/fsps", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/fsps"}, {"uid": "github/ckay314/OSPREI", "html_url": "https://rseng.github.io/software/repository/github/ckay314/OSPREI", "api_url": "https://rseng.github.io/software/api/repos/github/ckay314/OSPREI"}, {"uid": "github/dartoon/galight", "html_url": "https://rseng.github.io/software/repository/github/dartoon/galight", "api_url": "https://rseng.github.io/software/api/repos/github/dartoon/galight"}, {"uid": "github/jonzink/EDI_Vetter_unplugged", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI_Vetter_unplugged", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI_Vetter_unplugged"}, {"uid": "github/jonzink/EDI-Vetter", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI-Vetter", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI-Vetter"}, {"uid": "github/Zstone19/pypetal", "html_url": "https://rseng.github.io/software/repository/github/Zstone19/pypetal", "api_url": "https://rseng.github.io/software/api/repos/github/Zstone19/pypetal"}, {"uid": "github/voting-tools/pref_voting", "html_url": "https://rseng.github.io/software/repository/github/voting-tools/pref_voting", "api_url": "https://rseng.github.io/software/api/repos/github/voting-tools/pref_voting"}, {"uid": "github/econ-ark/HARK", "html_url": "https://rseng.github.io/software/repository/github/econ-ark/HARK", "api_url": "https://rseng.github.io/software/api/repos/github/econ-ark/HARK"}, {"uid": "github/atakan/KeplerSolver", "html_url": "https://rseng.github.io/software/repository/github/atakan/KeplerSolver", "api_url": "https://rseng.github.io/software/api/repos/github/atakan/KeplerSolver"}, {"uid": "github/smog-server/OpenSMOG", "html_url": "https://rseng.github.io/software/repository/github/smog-server/OpenSMOG", "api_url": "https://rseng.github.io/software/api/repos/github/smog-server/OpenSMOG"}, {"uid": "github/jessecambon/tidygeocoder", "html_url": "https://rseng.github.io/software/repository/github/jessecambon/tidygeocoder", "api_url": "https://rseng.github.io/software/api/repos/github/jessecambon/tidygeocoder"}, {"uid": "github/RBrearton/islatu", "html_url": "https://rseng.github.io/software/repository/github/RBrearton/islatu", "api_url": "https://rseng.github.io/software/api/repos/github/RBrearton/islatu"}, {"uid": "github/spokenlanguage/platalea", "html_url": "https://rseng.github.io/software/repository/github/spokenlanguage/platalea", "api_url": "https://rseng.github.io/software/api/repos/github/spokenlanguage/platalea"}, {"uid": "github/OpenWaterAnalytics/EPyT", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/EPyT", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/EPyT"}, {"uid": "github/OpenWaterAnalytics/pyswmm", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/pyswmm", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/pyswmm"}, {"uid": "github/sanjibs/bmcmc", "html_url": "https://rseng.github.io/software/repository/github/sanjibs/bmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/sanjibs/bmcmc"}, {"uid": "github/alejostark/phase_space_cosmo_fisher", "html_url": "https://rseng.github.io/software/repository/github/alejostark/phase_space_cosmo_fisher", "api_url": "https://rseng.github.io/software/api/repos/github/alejostark/phase_space_cosmo_fisher"}, {"uid": "github/kegiljarhus/pyBEMT", "html_url": "https://rseng.github.io/software/repository/github/kegiljarhus/pyBEMT", "api_url": "https://rseng.github.io/software/api/repos/github/kegiljarhus/pyBEMT"}, {"uid": "github/ymaan4/rficlean", "html_url": "https://rseng.github.io/software/repository/github/ymaan4/rficlean", "api_url": "https://rseng.github.io/software/api/repos/github/ymaan4/rficlean"}, {"uid": "github/rhpvorderman/sequali", "html_url": "https://rseng.github.io/software/repository/github/rhpvorderman/sequali", "api_url": "https://rseng.github.io/software/api/repos/github/rhpvorderman/sequali"}, {"uid": "github/AliYoussef96/parazitCUB", "html_url": "https://rseng.github.io/software/repository/github/AliYoussef96/parazitCUB", "api_url": "https://rseng.github.io/software/api/repos/github/AliYoussef96/parazitCUB"}, {"uid": "github/nextstrain/auspice", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/auspice", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/auspice"}, {"uid": "github/nextstrain/nextclade", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/nextclade", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/nextclade"}, {"uid": "github/nextstrain/augur", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/augur", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/augur"}, {"uid": "github/N-BodyShop/smooth", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/smooth", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/smooth"}, {"uid": "github/N-BodyShop/fof", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/fof", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/fof"}, {"uid": "github/justinread/gravsphere", "html_url": "https://rseng.github.io/software/repository/github/justinread/gravsphere", "api_url": "https://rseng.github.io/software/api/repos/github/justinread/gravsphere"}, {"uid": "github/dtamayo/reboundx", "html_url": "https://rseng.github.io/software/repository/github/dtamayo/reboundx", "api_url": "https://rseng.github.io/software/api/repos/github/dtamayo/reboundx"}, {"uid": "github/scverse/muon", "html_url": "https://rseng.github.io/software/repository/github/scverse/muon", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/muon"}, {"uid": "github/scverse/scanpy", "html_url": "https://rseng.github.io/software/repository/github/scverse/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/scanpy"}, {"uid": "github/scverse/anndata", "html_url": "https://rseng.github.io/software/repository/github/scverse/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/anndata"}, {"uid": "github/kinleyid/tempodisco", "html_url": "https://rseng.github.io/software/repository/github/kinleyid/tempodisco", "api_url": "https://rseng.github.io/software/api/repos/github/kinleyid/tempodisco"}, {"uid": "github/Fermipy/fermipy", "html_url": "https://rseng.github.io/software/repository/github/Fermipy/fermipy", "api_url": "https://rseng.github.io/software/api/repos/github/Fermipy/fermipy"}, {"uid": "github/BenNordick/HiLoop", "html_url": "https://rseng.github.io/software/repository/github/BenNordick/HiLoop", "api_url": "https://rseng.github.io/software/api/repos/github/BenNordick/HiLoop"}, {"uid": "github/keck-datareductionpipelines/MosfireDRP", "html_url": "https://rseng.github.io/software/repository/github/keck-datareductionpipelines/MosfireDRP", "api_url": "https://rseng.github.io/software/api/repos/github/keck-datareductionpipelines/MosfireDRP"}, {"uid": "github/panoptes/POCS", "html_url": "https://rseng.github.io/software/repository/github/panoptes/POCS", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes/POCS"}, {"uid": "github/GBLille/MassiveFold", "html_url": "https://rseng.github.io/software/repository/github/GBLille/MassiveFold", "api_url": "https://rseng.github.io/software/api/repos/github/GBLille/MassiveFold"}, {"uid": "github/ZhenjiangFan/DAG-deepVASE", "html_url": "https://rseng.github.io/software/repository/github/ZhenjiangFan/DAG-deepVASE", "api_url": "https://rseng.github.io/software/api/repos/github/ZhenjiangFan/DAG-deepVASE"}, {"uid": "github/LINNAE-project/SFB-Annotator", "html_url": "https://rseng.github.io/software/repository/github/LINNAE-project/SFB-Annotator", "api_url": "https://rseng.github.io/software/api/repos/github/LINNAE-project/SFB-Annotator"}, {"uid": "github/bsafdi/stellarWakes", "html_url": "https://rseng.github.io/software/repository/github/bsafdi/stellarWakes", "api_url": "https://rseng.github.io/software/api/repos/github/bsafdi/stellarWakes"}, {"uid": "github/HEML/HEML", "html_url": "https://rseng.github.io/software/repository/github/HEML/HEML", "api_url": "https://rseng.github.io/software/api/repos/github/HEML/HEML"}, {"uid": "github/bwvdnbro/HydroCode1D", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/HydroCode1D", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/HydroCode1D"}, {"uid": "github/bwvdnbro/CMacIonize", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/CMacIonize", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/CMacIonize"}, {"uid": "github/iontorrent/TS", "html_url": "https://rseng.github.io/software/repository/github/iontorrent/TS", "api_url": "https://rseng.github.io/software/api/repos/github/iontorrent/TS"}, {"uid": "github/mantzaris/LMDiskANN.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/LMDiskANN.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/LMDiskANN.jl"}, {"uid": "github/mantzaris/BenchmarkDataNLP.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/BenchmarkDataNLP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/BenchmarkDataNLP.jl"}, {"uid": "github/mantzaris/WunDeeDB.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/WunDeeDB.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/WunDeeDB.jl"}, {"uid": "github/fkoehlin/montepython_2cosmos_public", "html_url": "https://rseng.github.io/software/repository/github/fkoehlin/montepython_2cosmos_public", "api_url": "https://rseng.github.io/software/api/repos/github/fkoehlin/montepython_2cosmos_public"}, {"uid": "github/cvs-health/langfair", "html_url": "https://rseng.github.io/software/repository/github/cvs-health/langfair", "api_url": "https://rseng.github.io/software/api/repos/github/cvs-health/langfair"}, {"uid": "github/sisl/PyroRL", "html_url": "https://rseng.github.io/software/repository/github/sisl/PyroRL", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/PyroRL"}, {"uid": "github/sisl/ExpFamilyPCA.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/ExpFamilyPCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/ExpFamilyPCA.jl"}, {"uid": "github/sisl/POMDPStressTesting.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/POMDPStressTesting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/POMDPStressTesting.jl"}, {"uid": "github/signalling-games-org/evoke", "html_url": "https://rseng.github.io/software/repository/github/signalling-games-org/evoke", "api_url": "https://rseng.github.io/software/api/repos/github/signalling-games-org/evoke"}, {"uid": "github/trinityrnaseq/wiki", "html_url": "https://rseng.github.io/software/repository/github/trinityrnaseq/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/trinityrnaseq/wiki"}, {"uid": "github/anddssan/CLOUDe", "html_url": "https://rseng.github.io/software/repository/github/anddssan/CLOUDe", "api_url": "https://rseng.github.io/software/api/repos/github/anddssan/CLOUDe"}, {"uid": "github/VirtualPlantLab/PlantSimEngine.jl", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlantLab/PlantSimEngine.jl"}, {"uid": "github/xxsds/DYNAMIC", "html_url": "https://rseng.github.io/software/repository/github/xxsds/DYNAMIC", "api_url": "https://rseng.github.io/software/api/repos/github/xxsds/DYNAMIC"}, {"uid": "github/etiennepayet/nti", "html_url": "https://rseng.github.io/software/repository/github/etiennepayet/nti", "api_url": "https://rseng.github.io/software/api/repos/github/etiennepayet/nti"}, {"uid": "github/philip-long/robot_collision_checking", "html_url": "https://rseng.github.io/software/repository/github/philip-long/robot_collision_checking", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/robot_collision_checking"}, {"uid": "github/philip-long/constrained_manipulability", "html_url": "https://rseng.github.io/software/repository/github/philip-long/constrained_manipulability", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/constrained_manipulability"}, {"uid": "github/parallelwindfarms/byteparsing", "html_url": "https://rseng.github.io/software/repository/github/parallelwindfarms/byteparsing", "api_url": "https://rseng.github.io/software/api/repos/github/parallelwindfarms/byteparsing"}, {"uid": "github/kuanrongchan/COVID19-severity", "html_url": "https://rseng.github.io/software/repository/github/kuanrongchan/COVID19-severity", "api_url": "https://rseng.github.io/software/api/repos/github/kuanrongchan/COVID19-severity"}, {"uid": "github/equib/equib", "html_url": "https://rseng.github.io/software/repository/github/equib/equib", "api_url": "https://rseng.github.io/software/api/repos/github/equib/equib"}, {"uid": "github/equib/pyEQUIB", "html_url": "https://rseng.github.io/software/repository/github/equib/pyEQUIB", "api_url": "https://rseng.github.io/software/api/repos/github/equib/pyEQUIB"}, {"uid": "github/exoplanet-dev/exoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/exoplanet"}, {"uid": "github/exoplanet-dev/celerite2", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/celerite2", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/celerite2"}, {"uid": "github/exoplanet-dev/jaxoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/jaxoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/jaxoplanet"}, {"uid": "github/kartheikiyer/dense_basis", "html_url": "https://rseng.github.io/software/repository/github/kartheikiyer/dense_basis", "api_url": "https://rseng.github.io/software/api/repos/github/kartheikiyer/dense_basis"}, {"uid": "github/hdeeg/KvW", "html_url": "https://rseng.github.io/software/repository/github/hdeeg/KvW", "api_url": "https://rseng.github.io/software/api/repos/github/hdeeg/KvW"}, {"uid": "github/christophmschaefer/miluphcuda", "html_url": "https://rseng.github.io/software/repository/github/christophmschaefer/miluphcuda", "api_url": "https://rseng.github.io/software/api/repos/github/christophmschaefer/miluphcuda"}, {"uid": "github/fpavogt/fcmaker", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/fcmaker", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/fcmaker"}, {"uid": "github/fpavogt/E0102-VR", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/E0102-VR", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/E0102-VR"}, {"uid": "github/swiss-seismological-service/DUGseis", "html_url": "https://rseng.github.io/software/repository/github/swiss-seismological-service/DUGseis", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-seismological-service/DUGseis"}, {"uid": "github/Griffan/VerifyBamID", "html_url": "https://rseng.github.io/software/repository/github/Griffan/VerifyBamID", "api_url": "https://rseng.github.io/software/api/repos/github/Griffan/VerifyBamID"}, {"uid": "github/samaygarg/fuelcell", "html_url": "https://rseng.github.io/software/repository/github/samaygarg/fuelcell", "api_url": "https://rseng.github.io/software/api/repos/github/samaygarg/fuelcell"}, {"uid": "github/kkjawz/coref-ee", "html_url": "https://rseng.github.io/software/repository/github/kkjawz/coref-ee", "api_url": "https://rseng.github.io/software/api/repos/github/kkjawz/coref-ee"}, {"uid": "github/jveitchmichaelis/pygadgetreader", "html_url": "https://rseng.github.io/software/repository/github/jveitchmichaelis/pygadgetreader", "api_url": "https://rseng.github.io/software/api/repos/github/jveitchmichaelis/pygadgetreader"}, {"uid": "github/lwang-astro/PeTar", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/PeTar", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/PeTar"}, {"uid": "github/lwang-astro/SDAR", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/SDAR", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/SDAR"}, {"uid": "github/PDB-REDO/dssp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/dssp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/dssp"}, {"uid": "github/PDB-REDO/cif-tools", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/cif-tools", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/cif-tools"}, {"uid": "github/PDB-REDO/libpdb-redo", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libpdb-redo", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libpdb-redo"}, {"uid": "github/PDB-REDO/libcifpp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libcifpp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libcifpp"}, {"uid": "github/PDB-REDO/density-fitness", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/density-fitness", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/density-fitness"}, {"uid": "github/PDB-REDO/tortoize", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/tortoize", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/tortoize"}, {"uid": "github/labcbb/SqueezeCall", "html_url": "https://rseng.github.io/software/repository/github/labcbb/SqueezeCall", "api_url": "https://rseng.github.io/software/api/repos/github/labcbb/SqueezeCall"}, {"uid": "github/Kingsford-Group/scallop", "html_url": "https://rseng.github.io/software/repository/github/Kingsford-Group/scallop", "api_url": "https://rseng.github.io/software/api/repos/github/Kingsford-Group/scallop"}, {"uid": "github/lmwalkowicz/Cheetah", "html_url": "https://rseng.github.io/software/repository/github/lmwalkowicz/Cheetah", "api_url": "https://rseng.github.io/software/api/repos/github/lmwalkowicz/Cheetah"}, {"uid": "github/FDPS/FDPS", "html_url": "https://rseng.github.io/software/repository/github/FDPS/FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/FDPS/FDPS"}, {"uid": "github/cmayer/BaitFisher-package", "html_url": "https://rseng.github.io/software/repository/github/cmayer/BaitFisher-package", "api_url": "https://rseng.github.io/software/api/repos/github/cmayer/BaitFisher-package"}, {"uid": "github/susiegriggo/Phynteny_transformer", "html_url": "https://rseng.github.io/software/repository/github/susiegriggo/Phynteny_transformer", "api_url": "https://rseng.github.io/software/api/repos/github/susiegriggo/Phynteny_transformer"}, {"uid": "github/oneilsh/tidytensor", "html_url": "https://rseng.github.io/software/repository/github/oneilsh/tidytensor", "api_url": "https://rseng.github.io/software/api/repos/github/oneilsh/tidytensor"}, {"uid": "github/sblunt/orbitize", "html_url": "https://rseng.github.io/software/repository/github/sblunt/orbitize", "api_url": "https://rseng.github.io/software/api/repos/github/sblunt/orbitize"}, {"uid": "github/leesulab/arcMS", "html_url": "https://rseng.github.io/software/repository/github/leesulab/arcMS", "api_url": "https://rseng.github.io/software/api/repos/github/leesulab/arcMS"}, {"uid": "github/Toloka/crowd-kit", "html_url": "https://rseng.github.io/software/repository/github/Toloka/crowd-kit", "api_url": "https://rseng.github.io/software/api/repos/github/Toloka/crowd-kit"}, {"uid": "github/ClaudioZandonella/PRDA", "html_url": "https://rseng.github.io/software/repository/github/ClaudioZandonella/PRDA", "api_url": "https://rseng.github.io/software/api/repos/github/ClaudioZandonella/PRDA"}, {"uid": "github/sevimcengiz/Oryx-MRSI", "html_url": "https://rseng.github.io/software/repository/github/sevimcengiz/Oryx-MRSI", "api_url": "https://rseng.github.io/software/api/repos/github/sevimcengiz/Oryx-MRSI"}, {"uid": "github/scrm/scrmhub.io", "html_url": "https://rseng.github.io/software/repository/github/scrm/scrmhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/scrm/scrmhub.io"}, {"uid": "github/MrShoenel/metrics-as-scores", "html_url": "https://rseng.github.io/software/repository/github/MrShoenel/metrics-as-scores", "api_url": "https://rseng.github.io/software/api/repos/github/MrShoenel/metrics-as-scores"}, {"uid": "github/sdrastro/NWelch", "html_url": "https://rseng.github.io/software/repository/github/sdrastro/NWelch", "api_url": "https://rseng.github.io/software/api/repos/github/sdrastro/NWelch"}, {"uid": "github/project-asgard/asgard", "html_url": "https://rseng.github.io/software/repository/github/project-asgard/asgard", "api_url": "https://rseng.github.io/software/api/repos/github/project-asgard/asgard"}, {"uid": "github/minaskar/zeus", "html_url": "https://rseng.github.io/software/repository/github/minaskar/zeus", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/zeus"}, {"uid": "github/minaskar/hankl", "html_url": "https://rseng.github.io/software/repository/github/minaskar/hankl", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/hankl"}, {"uid": "github/minaskar/pocomc", "html_url": "https://rseng.github.io/software/repository/github/minaskar/pocomc", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/pocomc"}, {"uid": "github/lczech/gappa", "html_url": "https://rseng.github.io/software/repository/github/lczech/gappa", "api_url": "https://rseng.github.io/software/api/repos/github/lczech/gappa"}, {"uid": "github/pedronachtigall/ToxCodAn-Genome", "html_url": "https://rseng.github.io/software/repository/github/pedronachtigall/ToxCodAn-Genome", "api_url": "https://rseng.github.io/software/api/repos/github/pedronachtigall/ToxCodAn-Genome"}, {"uid": "github/braindatalab/PyBispectra", "html_url": "https://rseng.github.io/software/repository/github/braindatalab/PyBispectra", "api_url": "https://rseng.github.io/software/api/repos/github/braindatalab/PyBispectra"}, {"uid": "github/daeken/Emokit", "html_url": "https://rseng.github.io/software/repository/github/daeken/Emokit", "api_url": "https://rseng.github.io/software/api/repos/github/daeken/Emokit"}, {"uid": "github/fair-data/fairdatapoint-client", "html_url": "https://rseng.github.io/software/repository/github/fair-data/fairdatapoint-client", "api_url": "https://rseng.github.io/software/api/repos/github/fair-data/fairdatapoint-client"}, {"uid": "github/undark-lab/albatross", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/albatross", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/albatross"}, {"uid": "github/undark-lab/swyft", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/swyft", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/swyft"}, {"uid": "github/undark-lab/sstrax", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/sstrax", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/sstrax"}, {"uid": "github/florisvb/PyNumDiff", "html_url": "https://rseng.github.io/software/repository/github/florisvb/PyNumDiff", "api_url": "https://rseng.github.io/software/api/repos/github/florisvb/PyNumDiff"}, {"uid": "github/parkus/scicatalog", "html_url": "https://rseng.github.io/software/repository/github/parkus/scicatalog", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/scicatalog"}, {"uid": "github/parkus/ffd", "html_url": "https://rseng.github.io/software/repository/github/parkus/ffd", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/ffd"}, {"uid": "github/parkus/fiducial_flare", "html_url": "https://rseng.github.io/software/repository/github/parkus/fiducial_flare", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/fiducial_flare"}, {"uid": "github/Aminsinichi/wearable-hrv", "html_url": "https://rseng.github.io/software/repository/github/Aminsinichi/wearable-hrv", "api_url": "https://rseng.github.io/software/api/repos/github/Aminsinichi/wearable-hrv"}, {"uid": "github/MCTwo/MCMAC", "html_url": "https://rseng.github.io/software/repository/github/MCTwo/MCMAC", "api_url": "https://rseng.github.io/software/api/repos/github/MCTwo/MCMAC"}, {"uid": "github/isce-framework/dolphin", "html_url": "https://rseng.github.io/software/repository/github/isce-framework/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/isce-framework/dolphin"}, {"uid": "github/galtay/sphray", "html_url": "https://rseng.github.io/software/repository/github/galtay/sphray", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/sphray"}, {"uid": "github/galtay/urchin", "html_url": "https://rseng.github.io/software/repository/github/galtay/urchin", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/urchin"}, {"uid": "github/FlowModelingControl/flowtorch", "html_url": "https://rseng.github.io/software/repository/github/FlowModelingControl/flowtorch", "api_url": "https://rseng.github.io/software/api/repos/github/FlowModelingControl/flowtorch"}, {"uid": "github/BenWibking/quokka", "html_url": "https://rseng.github.io/software/repository/github/BenWibking/quokka", "api_url": "https://rseng.github.io/software/api/repos/github/BenWibking/quokka"}, {"uid": "github/flexible-atomic-code/fac", "html_url": "https://rseng.github.io/software/repository/github/flexible-atomic-code/fac", "api_url": "https://rseng.github.io/software/api/repos/github/flexible-atomic-code/fac"}, {"uid": "github/TravisWheelerLab/VIBES", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/VIBES", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/VIBES"}, {"uid": "github/TravisWheelerLab/NINJA", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/NINJA", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/NINJA"}, {"uid": "github/BasilioRuiz/SIR-code", "html_url": "https://rseng.github.io/software/repository/github/BasilioRuiz/SIR-code", "api_url": "https://rseng.github.io/software/api/repos/github/BasilioRuiz/SIR-code"}, {"uid": "github/ArgonneCPAC/diffmah", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffmah", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffmah"}, {"uid": "github/ArgonneCPAC/dsps", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/dsps", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/dsps"}, {"uid": "github/ArgonneCPAC/diffstar", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffstar", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffstar"}, {"uid": "github/bbuchfink/diamond", "html_url": "https://rseng.github.io/software/repository/github/bbuchfink/diamond", "api_url": "https://rseng.github.io/software/api/repos/github/bbuchfink/diamond"}, {"uid": "github/goshng/polap", "html_url": "https://rseng.github.io/software/repository/github/goshng/polap", "api_url": "https://rseng.github.io/software/api/repos/github/goshng/polap"}, {"uid": "github/tomalf2/recombinhunt-cov", "html_url": "https://rseng.github.io/software/repository/github/tomalf2/recombinhunt-cov", "api_url": "https://rseng.github.io/software/api/repos/github/tomalf2/recombinhunt-cov"}, {"uid": "github/bwinkel/cygrid", "html_url": "https://rseng.github.io/software/repository/github/bwinkel/cygrid", "api_url": "https://rseng.github.io/software/api/repos/github/bwinkel/cygrid"}, {"uid": "github/PimenoffV/biotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/biotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/biotic"}, {"uid": "github/PimenoffV/Abiotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/Abiotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/Abiotic"}, {"uid": "github/PimenoffV/VIBE", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/VIBE", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/VIBE"}, {"uid": "github/caseyjlaw/tpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/tpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/tpipe"}, {"uid": "github/caseyjlaw/rtpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/rtpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/rtpipe"}, {"uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", "html_url": "https://rseng.github.io/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", "api_url": "https://rseng.github.io/software/api/repos/github/FSEC-Photovoltaics/pvrpm-lcoe"}, {"uid": "github/DingshanDeng/ysoisochrone", "html_url": "https://rseng.github.io/software/repository/github/DingshanDeng/ysoisochrone", "api_url": "https://rseng.github.io/software/api/repos/github/DingshanDeng/ysoisochrone"}, {"uid": "github/tekpinar/correlationplus", "html_url": "https://rseng.github.io/software/repository/github/tekpinar/correlationplus", "api_url": "https://rseng.github.io/software/api/repos/github/tekpinar/correlationplus"}, {"uid": "github/ChengF-Lab/AOPEDF", "html_url": "https://rseng.github.io/software/repository/github/ChengF-Lab/AOPEDF", "api_url": "https://rseng.github.io/software/api/repos/github/ChengF-Lab/AOPEDF"}, {"uid": "github/iraf-community/pyraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/pyraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/pyraf"}, {"uid": "github/iraf-community/iraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/iraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/iraf"}, {"uid": "github/fkeruzore/halox", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/halox", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/halox"}, {"uid": "github/fkeruzore/picasso", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/picasso"}, {"uid": "github/fkeruzore/panco2", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/panco2", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/panco2"}, {"uid": "github/gmzsebastian/FLEET", "html_url": "https://rseng.github.io/software/repository/github/gmzsebastian/FLEET", "api_url": "https://rseng.github.io/software/api/repos/github/gmzsebastian/FLEET"}, {"uid": "github/tudelft3d/3dfier", "html_url": "https://rseng.github.io/software/repository/github/tudelft3d/3dfier", "api_url": "https://rseng.github.io/software/api/repos/github/tudelft3d/3dfier"}, {"uid": "github/loosolab/TOBIAS", "html_url": "https://rseng.github.io/software/repository/github/loosolab/TOBIAS", "api_url": "https://rseng.github.io/software/api/repos/github/loosolab/TOBIAS"}, {"uid": "github/lorenaacuna/GASTLI", "html_url": "https://rseng.github.io/software/repository/github/lorenaacuna/GASTLI", "api_url": "https://rseng.github.io/software/api/repos/github/lorenaacuna/GASTLI"}, {"uid": "github/tlambert03/pycudadecon", "html_url": "https://rseng.github.io/software/repository/github/tlambert03/pycudadecon", "api_url": "https://rseng.github.io/software/api/repos/github/tlambert03/pycudadecon"}, {"uid": "github/fkiwy/Finder_charts", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/Finder_charts", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/Finder_charts"}, {"uid": "github/fkiwy/unTimely_Catalog_explorer", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/unTimely_Catalog_explorer", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/unTimely_Catalog_explorer"}, {"uid": "github/fkiwy/AstroToolBox", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/AstroToolBox", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/AstroToolBox"}, {"uid": "github/cjbarrie/academictwitteR", "html_url": "https://rseng.github.io/software/repository/github/cjbarrie/academictwitteR", "api_url": "https://rseng.github.io/software/api/repos/github/cjbarrie/academictwitteR"}, {"uid": "github/ilaudy/PIAO", "html_url": "https://rseng.github.io/software/repository/github/ilaudy/PIAO", "api_url": "https://rseng.github.io/software/api/repos/github/ilaudy/PIAO"}, {"uid": "github/ArnaudCassan/microlensing", "html_url": "https://rseng.github.io/software/repository/github/ArnaudCassan/microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/ArnaudCassan/microlensing"}, {"uid": "github/ViennaRNA/RNAblueprint", "html_url": "https://rseng.github.io/software/repository/github/ViennaRNA/RNAblueprint", "api_url": "https://rseng.github.io/software/api/repos/github/ViennaRNA/RNAblueprint"}, {"uid": "github/a-griffiths/AutoSpec", "html_url": "https://rseng.github.io/software/repository/github/a-griffiths/AutoSpec", "api_url": "https://rseng.github.io/software/api/repos/github/a-griffiths/AutoSpec"}, {"uid": "github/matchms/ms2deepscore", "html_url": "https://rseng.github.io/software/repository/github/matchms/ms2deepscore", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/ms2deepscore"}, {"uid": "github/matchms/matchms", "html_url": "https://rseng.github.io/software/repository/github/matchms/matchms", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/matchms"}, {"uid": "github/chrisfinlay/tabascal", "html_url": "https://rseng.github.io/software/repository/github/chrisfinlay/tabascal", "api_url": "https://rseng.github.io/software/api/repos/github/chrisfinlay/tabascal"}, {"uid": "github/1054/Crab.Toolkit.michi2", "html_url": "https://rseng.github.io/software/repository/github/1054/Crab.Toolkit.michi2", "api_url": "https://rseng.github.io/software/api/repos/github/1054/Crab.Toolkit.michi2"}, {"uid": "github/3fon3fonov/exostriker", "html_url": "https://rseng.github.io/software/repository/github/3fon3fonov/exostriker", "api_url": "https://rseng.github.io/software/api/repos/github/3fon3fonov/exostriker"}, {"uid": "github/firefly-cpp/NiaARM", "html_url": "https://rseng.github.io/software/repository/github/firefly-cpp/NiaARM", "api_url": "https://rseng.github.io/software/api/repos/github/firefly-cpp/NiaARM"}, {"uid": "github/quanted/esat", "html_url": "https://rseng.github.io/software/repository/github/quanted/esat", "api_url": "https://rseng.github.io/software/api/repos/github/quanted/esat"}, {"uid": "github/LiyrAstroph/RECON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/RECON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/RECON"}, {"uid": "github/LiyrAstroph/BRAINS", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/BRAINS", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/BRAINS"}, {"uid": "github/LiyrAstroph/PyCALI", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PyCALI", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PyCALI"}, {"uid": "github/LiyrAstroph/PIXON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PIXON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PIXON"}, {"uid": "github/AstroChem/VISIBLE", "html_url": "https://rseng.github.io/software/repository/github/AstroChem/VISIBLE", "api_url": "https://rseng.github.io/software/api/repos/github/AstroChem/VISIBLE"}, {"uid": "github/aslan-ng/keepdelta", "html_url": "https://rseng.github.io/software/repository/github/aslan-ng/keepdelta", "api_url": "https://rseng.github.io/software/api/repos/github/aslan-ng/keepdelta"}, {"uid": "github/bge-barcoding/gene_fetch", "html_url": "https://rseng.github.io/software/repository/github/bge-barcoding/gene_fetch", "api_url": "https://rseng.github.io/software/api/repos/github/bge-barcoding/gene_fetch"}, {"uid": "github/aiidateam/kiwipy", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/kiwipy", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/kiwipy"}, {"uid": "github/aiidateam/aiida-core", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/aiida-core", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/aiida-core"}, {"uid": "github/cmbant/getdist", "html_url": "https://rseng.github.io/software/repository/github/cmbant/getdist", "api_url": "https://rseng.github.io/software/api/repos/github/cmbant/getdist"}, {"uid": "github/EBI-Metagenomics/EukCC", "html_url": "https://rseng.github.io/software/repository/github/EBI-Metagenomics/EukCC", "api_url": "https://rseng.github.io/software/api/repos/github/EBI-Metagenomics/EukCC"}, {"uid": "github/RangamaniLabUCSD/smart", "html_url": "https://rseng.github.io/software/repository/github/RangamaniLabUCSD/smart", "api_url": "https://rseng.github.io/software/api/repos/github/RangamaniLabUCSD/smart"}, {"uid": "github/IFB-ElixirFr/edam-browser", "html_url": "https://rseng.github.io/software/repository/github/IFB-ElixirFr/edam-browser", "api_url": "https://rseng.github.io/software/api/repos/github/IFB-ElixirFr/edam-browser"}, {"uid": "github/shengjin/nii-c", "html_url": "https://rseng.github.io/software/repository/github/shengjin/nii-c", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/nii-c"}, {"uid": "github/shengjin/Nii", "html_url": "https://rseng.github.io/software/repository/github/shengjin/Nii", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/Nii"}, {"uid": "github/ntlucia/BrownDwarf-SpectralIndices", "html_url": "https://rseng.github.io/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", "api_url": "https://rseng.github.io/software/api/repos/github/ntlucia/BrownDwarf-SpectralIndices"}, {"uid": "github/chapmanb/bcbio.variation", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.variation", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.variation"}, {"uid": "github/chapmanb/bcbio.prioritize", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.prioritize", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.prioritize"}, {"uid": "github/chapmanb/bcbb", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbb", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbb"}, {"uid": "github/MesserLab/SLiM", "html_url": "https://rseng.github.io/software/repository/github/MesserLab/SLiM", "api_url": "https://rseng.github.io/software/api/repos/github/MesserLab/SLiM"}, {"uid": "github/lsncibb/microbiomeGWAS", "html_url": "https://rseng.github.io/software/repository/github/lsncibb/microbiomeGWAS", "api_url": "https://rseng.github.io/software/api/repos/github/lsncibb/microbiomeGWAS"}, {"uid": "github/mikhailklassen/protostellar_evolution", "html_url": "https://rseng.github.io/software/repository/github/mikhailklassen/protostellar_evolution", "api_url": "https://rseng.github.io/software/api/repos/github/mikhailklassen/protostellar_evolution"}, {"uid": "github/hetalang/heta-compiler", "html_url": "https://rseng.github.io/software/repository/github/hetalang/heta-compiler", "api_url": "https://rseng.github.io/software/api/repos/github/hetalang/heta-compiler"}, {"uid": "github/RealTimeGenomics/rtg-tools", "html_url": "https://rseng.github.io/software/repository/github/RealTimeGenomics/rtg-tools", "api_url": "https://rseng.github.io/software/api/repos/github/RealTimeGenomics/rtg-tools"}, {"uid": "github/INCEPTdk/adaptr", "html_url": "https://rseng.github.io/software/repository/github/INCEPTdk/adaptr", "api_url": "https://rseng.github.io/software/api/repos/github/INCEPTdk/adaptr"}, {"uid": "github/astrocaroline/opacity-wizard", "html_url": "https://rseng.github.io/software/repository/github/astrocaroline/opacity-wizard", "api_url": "https://rseng.github.io/software/api/repos/github/astrocaroline/opacity-wizard"}, {"uid": "github/cmzmasek/forester", "html_url": "https://rseng.github.io/software/repository/github/cmzmasek/forester", "api_url": "https://rseng.github.io/software/api/repos/github/cmzmasek/forester"}, {"uid": "github/parklab/SCAN2", "html_url": "https://rseng.github.io/software/repository/github/parklab/SCAN2", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/SCAN2"}, {"uid": "github/parklab/LiRA", "html_url": "https://rseng.github.io/software/repository/github/parklab/LiRA", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/LiRA"}, {"uid": "github/rauschenberger/transreg", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/transreg", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/transreg"}, {"uid": "github/rauschenberger/joinet", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/joinet", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/joinet"}, {"uid": "github/sievers/corrcal", "html_url": "https://rseng.github.io/software/repository/github/sievers/corrcal", "api_url": "https://rseng.github.io/software/api/repos/github/sievers/corrcal"}, {"uid": "github/lahovniktadej/gatree", "html_url": "https://rseng.github.io/software/repository/github/lahovniktadej/gatree", "api_url": "https://rseng.github.io/software/api/repos/github/lahovniktadej/gatree"}, {"uid": "github/PMBio/spatialde2-paper", "html_url": "https://rseng.github.io/software/repository/github/PMBio/spatialde2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/spatialde2-paper"}, {"uid": "github/PMBio/peer", "html_url": "https://rseng.github.io/software/repository/github/PMBio/peer", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/peer"}, {"uid": "github/qMRLab/qMRLab", "html_url": "https://rseng.github.io/software/repository/github/qMRLab/qMRLab", "api_url": "https://rseng.github.io/software/api/repos/github/qMRLab/qMRLab"}, {"uid": "github/TimothyADavis/KinMSpy", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/KinMSpy", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/KinMSpy"}, {"uid": "github/TimothyADavis/GAStimator", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/GAStimator", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/GAStimator"}, {"uid": "github/ucberkeleyseti/turbo_seti", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/turbo_seti", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/turbo_seti"}, {"uid": "github/ucberkeleyseti/blimpy", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/blimpy", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/blimpy"}, {"uid": "github/sibirrer/hierArc", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/hierArc", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/hierArc"}, {"uid": "github/sibirrer/lenstronomy", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/lenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/lenstronomy"}, {"uid": "github/sibirrer/psfr", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/psfr", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/psfr"}, {"uid": "github/joglekara/VlaPy", "html_url": "https://rseng.github.io/software/repository/github/joglekara/VlaPy", "api_url": "https://rseng.github.io/software/api/repos/github/joglekara/VlaPy"}, {"uid": "github/ccsosa/GOCompare", "html_url": "https://rseng.github.io/software/repository/github/ccsosa/GOCompare", "api_url": "https://rseng.github.io/software/api/repos/github/ccsosa/GOCompare"}, {"uid": "github/ctkelley/MultiPrecisionArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/ctkelley/MultiPrecisionArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ctkelley/MultiPrecisionArrays.jl"}, {"uid": "github/nhhaidee/WaveSeekerNet", "html_url": "https://rseng.github.io/software/repository/github/nhhaidee/WaveSeekerNet", "api_url": "https://rseng.github.io/software/api/repos/github/nhhaidee/WaveSeekerNet"}, {"uid": "github/juliotux/astropop", "html_url": "https://rseng.github.io/software/repository/github/juliotux/astropop", "api_url": "https://rseng.github.io/software/api/repos/github/juliotux/astropop"}, {"uid": "github/rmpiro/decompTumor2Sig", "html_url": "https://rseng.github.io/software/repository/github/rmpiro/decompTumor2Sig", "api_url": "https://rseng.github.io/software/api/repos/github/rmpiro/decompTumor2Sig"}, {"uid": "github/HUST-NingKang-Lab/ONN4MST", "html_url": "https://rseng.github.io/software/repository/github/HUST-NingKang-Lab/ONN4MST", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-NingKang-Lab/ONN4MST"}, {"uid": "github/rvalieris/parallel-fastq-dump", "html_url": "https://rseng.github.io/software/repository/github/rvalieris/parallel-fastq-dump", "api_url": "https://rseng.github.io/software/api/repos/github/rvalieris/parallel-fastq-dump"}, {"uid": "github/rahulshah1397/LADDER", "html_url": "https://rseng.github.io/software/repository/github/rahulshah1397/LADDER", "api_url": "https://rseng.github.io/software/api/repos/github/rahulshah1397/LADDER"}, {"uid": "github/PieterjanRobbe/GaussianRandomFields.jl", "html_url": "https://rseng.github.io/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PieterjanRobbe/GaussianRandomFields.jl"}, {"uid": "github/BMILAB/scLINE", "html_url": "https://rseng.github.io/software/repository/github/BMILAB/scLINE", "api_url": "https://rseng.github.io/software/api/repos/github/BMILAB/scLINE"}, {"uid": "github/DataBiosphere/wdl-parsers", "html_url": "https://rseng.github.io/software/repository/github/DataBiosphere/wdl-parsers", "api_url": "https://rseng.github.io/software/api/repos/github/DataBiosphere/wdl-parsers"}, {"uid": "github/nla-group/fABBA", "html_url": "https://rseng.github.io/software/repository/github/nla-group/fABBA", "api_url": "https://rseng.github.io/software/api/repos/github/nla-group/fABBA"}, {"uid": "github/CMU-SAFARI/BLEND", "html_url": "https://rseng.github.io/software/repository/github/CMU-SAFARI/BLEND", "api_url": "https://rseng.github.io/software/api/repos/github/CMU-SAFARI/BLEND"}, {"uid": "github/abatten/fruitbat", "html_url": "https://rseng.github.io/software/repository/github/abatten/fruitbat", "api_url": "https://rseng.github.io/software/api/repos/github/abatten/fruitbat"}, {"uid": "github/Hegghammer/daiR", "html_url": "https://rseng.github.io/software/repository/github/Hegghammer/daiR", "api_url": "https://rseng.github.io/software/api/repos/github/Hegghammer/daiR"}, {"uid": "github/BirkhoffG/jax-relax", "html_url": "https://rseng.github.io/software/repository/github/BirkhoffG/jax-relax", "api_url": "https://rseng.github.io/software/api/repos/github/BirkhoffG/jax-relax"}, {"uid": "github/biolab-unige/nifti2dicom", "html_url": "https://rseng.github.io/software/repository/github/biolab-unige/nifti2dicom", "api_url": "https://rseng.github.io/software/api/repos/github/biolab-unige/nifti2dicom"}, {"uid": "github/Crick-CancerGenomics/ascat", "html_url": "https://rseng.github.io/software/repository/github/Crick-CancerGenomics/ascat", "api_url": "https://rseng.github.io/software/api/repos/github/Crick-CancerGenomics/ascat"}, {"uid": "github/pynbody/genetIC", "html_url": "https://rseng.github.io/software/repository/github/pynbody/genetIC", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/genetIC"}, {"uid": "github/pynbody/pynbody", "html_url": "https://rseng.github.io/software/repository/github/pynbody/pynbody", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/pynbody"}, {"uid": "github/pynbody/tangos", "html_url": "https://rseng.github.io/software/repository/github/pynbody/tangos", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/tangos"}, {"uid": "github/li-shaochuan/SEDIM", "html_url": "https://rseng.github.io/software/repository/github/li-shaochuan/SEDIM", "api_url": "https://rseng.github.io/software/api/repos/github/li-shaochuan/SEDIM"}, {"uid": "github/hydroframe/hf_hydrodata", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/hf_hydrodata", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/hf_hydrodata"}, {"uid": "github/hydroframe/subsettools", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/subsettools", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/subsettools"}, {"uid": "github/SpaceML/GalaxyGAN", "html_url": "https://rseng.github.io/software/repository/github/SpaceML/GalaxyGAN", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceML/GalaxyGAN"}, {"uid": "github/timothydmorton/vespa", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/vespa", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/vespa"}, {"uid": "github/timothydmorton/isochrones", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/isochrones", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/isochrones"}, {"uid": "github/hippke/pandora", "html_url": "https://rseng.github.io/software/repository/github/hippke/pandora", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pandora"}, {"uid": "github/hippke/wotan", "html_url": "https://rseng.github.io/software/repository/github/hippke/wotan", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/wotan"}, {"uid": "github/hippke/PyOSE", "html_url": "https://rseng.github.io/software/repository/github/hippke/PyOSE", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/PyOSE"}, {"uid": "github/hippke/communication", "html_url": "https://rseng.github.io/software/repository/github/hippke/communication", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/communication"}, {"uid": "github/hippke/pulses", "html_url": "https://rseng.github.io/software/repository/github/hippke/pulses", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pulses"}, {"uid": "github/hippke/tls", "html_url": "https://rseng.github.io/software/repository/github/hippke/tls", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/tls"}, {"uid": "github/deaglanbartlett/symbolic_pofk", "html_url": "https://rseng.github.io/software/repository/github/deaglanbartlett/symbolic_pofk", "api_url": "https://rseng.github.io/software/api/repos/github/deaglanbartlett/symbolic_pofk"}, {"uid": "github/flatironinstitute/nifty-ls", "html_url": "https://rseng.github.io/software/repository/github/flatironinstitute/nifty-ls", "api_url": "https://rseng.github.io/software/api/repos/github/flatironinstitute/nifty-ls"}, {"uid": "github/FabianPlum/OmniTrax", "html_url": "https://rseng.github.io/software/repository/github/FabianPlum/OmniTrax", "api_url": "https://rseng.github.io/software/api/repos/github/FabianPlum/OmniTrax"}, {"uid": "github/bioinfodlsu/PHIStruct", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/PHIStruct", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/PHIStruct"}, {"uid": "github/bioinfodlsu/phage-host-prediction", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/phage-host-prediction", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/phage-host-prediction"}, {"uid": "github/MathynVanD/GraFIT", "html_url": "https://rseng.github.io/software/repository/github/MathynVanD/GraFIT", "api_url": "https://rseng.github.io/software/api/repos/github/MathynVanD/GraFIT"}, {"uid": "github/pyranges/pyrle", "html_url": "https://rseng.github.io/software/repository/github/pyranges/pyrle", "api_url": "https://rseng.github.io/software/api/repos/github/pyranges/pyrle"}, {"uid": "github/PavlidisLab/Gemma", "html_url": "https://rseng.github.io/software/repository/github/PavlidisLab/Gemma", "api_url": "https://rseng.github.io/software/api/repos/github/PavlidisLab/Gemma"}, {"uid": "github/AWehrhahn/SME", "html_url": "https://rseng.github.io/software/repository/github/AWehrhahn/SME", "api_url": "https://rseng.github.io/software/api/repos/github/AWehrhahn/SME"}, {"uid": "github/LCOGT/banzai", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai"}, {"uid": "github/LCOGT/banzai-nres", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai-nres", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai-nres"}, {"uid": "github/LCOGT/neoexchange", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/neoexchange", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/neoexchange"}, {"uid": "github/fredstro/hilbertmodgroup", "html_url": "https://rseng.github.io/software/repository/github/fredstro/hilbertmodgroup", "api_url": "https://rseng.github.io/software/api/repos/github/fredstro/hilbertmodgroup"}, {"uid": "github/arabic-digital-humanities/adhtools", "html_url": "https://rseng.github.io/software/repository/github/arabic-digital-humanities/adhtools", "api_url": "https://rseng.github.io/software/api/repos/github/arabic-digital-humanities/adhtools"}, {"uid": "github/mms-fcul/PypKa", "html_url": "https://rseng.github.io/software/repository/github/mms-fcul/PypKa", "api_url": "https://rseng.github.io/software/api/repos/github/mms-fcul/PypKa"}, {"uid": "github/max-little/GRAPL", "html_url": "https://rseng.github.io/software/repository/github/max-little/GRAPL", "api_url": "https://rseng.github.io/software/api/repos/github/max-little/GRAPL"}, {"uid": "github/konradhoeffner/hdt", "html_url": "https://rseng.github.io/software/repository/github/konradhoeffner/hdt", "api_url": "https://rseng.github.io/software/api/repos/github/konradhoeffner/hdt"}, {"uid": "github/xCDAT/xcdat", "html_url": "https://rseng.github.io/software/repository/github/xCDAT/xcdat", "api_url": "https://rseng.github.io/software/api/repos/github/xCDAT/xcdat"}, {"uid": "github/mianbreton/pysco", "html_url": "https://rseng.github.io/software/repository/github/mianbreton/pysco", "api_url": "https://rseng.github.io/software/api/repos/github/mianbreton/pysco"}, {"uid": "github/hotokezaka/HeatingRate", "html_url": "https://rseng.github.io/software/repository/github/hotokezaka/HeatingRate", "api_url": "https://rseng.github.io/software/api/repos/github/hotokezaka/HeatingRate"}, {"uid": "github/julblarod/SOPHISM", "html_url": "https://rseng.github.io/software/repository/github/julblarod/SOPHISM", "api_url": "https://rseng.github.io/software/api/repos/github/julblarod/SOPHISM"}, {"uid": "github/ParkvilleData/MetaGenePipe", "html_url": "https://rseng.github.io/software/repository/github/ParkvilleData/MetaGenePipe", "api_url": "https://rseng.github.io/software/api/repos/github/ParkvilleData/MetaGenePipe"}, {"uid": "github/Adamtaranto/mimeo", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/mimeo", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/mimeo"}, {"uid": "github/Adamtaranto/Yanagiba", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/Yanagiba", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/Yanagiba"}, {"uid": "github/mofanv/darknetz", "html_url": "https://rseng.github.io/software/repository/github/mofanv/darknetz", "api_url": "https://rseng.github.io/software/api/repos/github/mofanv/darknetz"}, {"uid": "github/rajeshmondal18/FoF-Halo-finder", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/FoF-Halo-finder", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/FoF-Halo-finder"}, {"uid": "github/rajeshmondal18/MAPS", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/MAPS"}, {"uid": "github/rajeshmondal18/N-body", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/N-body", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/N-body"}, {"uid": "github/rajeshmondal18/ReionYuga", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/ReionYuga", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/ReionYuga"}, {"uid": "github/rajeshmondal18/DviSukta", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/DviSukta", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/DviSukta"}, {"uid": "github/DariaGangardt/pAGN", "html_url": "https://rseng.github.io/software/repository/github/DariaGangardt/pAGN", "api_url": "https://rseng.github.io/software/api/repos/github/DariaGangardt/pAGN"}, {"uid": "github/SharmaLlama/ticktack", "html_url": "https://rseng.github.io/software/repository/github/SharmaLlama/ticktack", "api_url": "https://rseng.github.io/software/api/repos/github/SharmaLlama/ticktack"}, {"uid": "github/assumpcaothiago/NRPyElliptic", "html_url": "https://rseng.github.io/software/repository/github/assumpcaothiago/NRPyElliptic", "api_url": "https://rseng.github.io/software/api/repos/github/assumpcaothiago/NRPyElliptic"}, {"uid": "github/RobertHTyler/TROPF", "html_url": "https://rseng.github.io/software/repository/github/RobertHTyler/TROPF", "api_url": "https://rseng.github.io/software/api/repos/github/RobertHTyler/TROPF"}, {"uid": "github/BIMSBbioinfo/pigx_scrnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_scrnaseq"}, {"uid": "github/BIMSBbioinfo/pigx_rnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_rnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_rnaseq"}, {"uid": "github/dieghernan/tidyterra", "html_url": "https://rseng.github.io/software/repository/github/dieghernan/tidyterra", "api_url": "https://rseng.github.io/software/api/repos/github/dieghernan/tidyterra"}, {"uid": "github/acerbilab/pybads", "html_url": "https://rseng.github.io/software/repository/github/acerbilab/pybads", "api_url": "https://rseng.github.io/software/api/repos/github/acerbilab/pybads"}, {"uid": "github/Autostronomy/AstroPhot", "html_url": "https://rseng.github.io/software/repository/github/Autostronomy/AstroPhot", "api_url": "https://rseng.github.io/software/api/repos/github/Autostronomy/AstroPhot"}, {"uid": "github/luxsrc/gray", "html_url": "https://rseng.github.io/software/repository/github/luxsrc/gray", "api_url": "https://rseng.github.io/software/api/repos/github/luxsrc/gray"}, {"uid": "github/delve-team/delve", "html_url": "https://rseng.github.io/software/repository/github/delve-team/delve", "api_url": "https://rseng.github.io/software/api/repos/github/delve-team/delve"}, {"uid": "github/labsyspharm/minerva-story", "html_url": "https://rseng.github.io/software/repository/github/labsyspharm/minerva-story", "api_url": "https://rseng.github.io/software/api/repos/github/labsyspharm/minerva-story"}, {"uid": "github/tqsd/photon_weave", "html_url": "https://rseng.github.io/software/repository/github/tqsd/photon_weave", "api_url": "https://rseng.github.io/software/api/repos/github/tqsd/photon_weave"}, {"uid": "github/opnavlab/sonic", "html_url": "https://rseng.github.io/software/repository/github/opnavlab/sonic", "api_url": "https://rseng.github.io/software/api/repos/github/opnavlab/sonic"}, {"uid": "github/darthoctopus/reggae", "html_url": "https://rseng.github.io/software/repository/github/darthoctopus/reggae", "api_url": "https://rseng.github.io/software/api/repos/github/darthoctopus/reggae"}, {"uid": "github/astroML/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroML/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroML/gatspy"}, {"uid": "github/mtholder/ncl", "html_url": "https://rseng.github.io/software/repository/github/mtholder/ncl", "api_url": "https://rseng.github.io/software/api/repos/github/mtholder/ncl"}, {"uid": "github/joshspeagle/dynesty", "html_url": "https://rseng.github.io/software/repository/github/joshspeagle/dynesty", "api_url": "https://rseng.github.io/software/api/repos/github/joshspeagle/dynesty"}, {"uid": "github/Schuch666/eva3dm", "html_url": "https://rseng.github.io/software/repository/github/Schuch666/eva3dm", "api_url": "https://rseng.github.io/software/api/repos/github/Schuch666/eva3dm"}, {"uid": "github/GRChombo/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRFolres"}, {"uid": "github/GRChombo/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRChombo"}, {"uid": "github/GRChombo/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRDzhadzha"}, {"uid": "github/ahmedmagds/GNUVID", "html_url": "https://rseng.github.io/software/repository/github/ahmedmagds/GNUVID", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmagds/GNUVID"}, {"uid": "github/Trybnetic/paat", "html_url": "https://rseng.github.io/software/repository/github/Trybnetic/paat", "api_url": "https://rseng.github.io/software/api/repos/github/Trybnetic/paat"}, {"uid": "github/ixkael/QuickSip", "html_url": "https://rseng.github.io/software/repository/github/ixkael/QuickSip", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/QuickSip"}, {"uid": "github/ixkael/Delight", "html_url": "https://rseng.github.io/software/repository/github/ixkael/Delight", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/Delight"}, {"uid": "github/ixkael/3DEX", "html_url": "https://rseng.github.io/software/repository/github/ixkael/3DEX", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/3DEX"}, {"uid": "github/palaimon/ipyannotator", "html_url": "https://rseng.github.io/software/repository/github/palaimon/ipyannotator", "api_url": "https://rseng.github.io/software/api/repos/github/palaimon/ipyannotator"}, {"uid": "github/danxhuber/galclassify", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/galclassify", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/galclassify"}, {"uid": "github/danxhuber/evolstate", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/evolstate", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/evolstate"}, {"uid": "github/caracal-pipeline/caracal", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/caracal", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/caracal"}, {"uid": "github/caracal-pipeline/stimela", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/stimela", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/stimela"}, {"uid": "github/Razumovskyy/MARFA", "html_url": "https://rseng.github.io/software/repository/github/Razumovskyy/MARFA", "api_url": "https://rseng.github.io/software/api/repos/github/Razumovskyy/MARFA"}, {"uid": "github/openvax/pyensembl", "html_url": "https://rseng.github.io/software/repository/github/openvax/pyensembl", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/pyensembl"}, {"uid": "github/openvax/mhcflurry", "html_url": "https://rseng.github.io/software/repository/github/openvax/mhcflurry", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/mhcflurry"}, {"uid": "github/thachnguyen/CRISPRnano", "html_url": "https://rseng.github.io/software/repository/github/thachnguyen/CRISPRnano", "api_url": "https://rseng.github.io/software/api/repos/github/thachnguyen/CRISPRnano"}, {"uid": "github/ConnorStoneAstro/AutoProf", "html_url": "https://rseng.github.io/software/repository/github/ConnorStoneAstro/AutoProf", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorStoneAstro/AutoProf"}, {"uid": "github/Chenmi0619/GALMoss", "html_url": "https://rseng.github.io/software/repository/github/Chenmi0619/GALMoss", "api_url": "https://rseng.github.io/software/api/repos/github/Chenmi0619/GALMoss"}, {"uid": "github/cbottrell/realsim_ifs", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/realsim_ifs", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/realsim_ifs"}, {"uid": "github/cbottrell/RealSim", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/RealSim", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/RealSim"}, {"uid": "github/vfonov/DARQ", "html_url": "https://rseng.github.io/software/repository/github/vfonov/DARQ", "api_url": "https://rseng.github.io/software/api/repos/github/vfonov/DARQ"}, {"uid": "github/CompGenomeLab/boquila", "html_url": "https://rseng.github.io/software/repository/github/CompGenomeLab/boquila", "api_url": "https://rseng.github.io/software/api/repos/github/CompGenomeLab/boquila"}, {"uid": "github/pkestene/xsmurf", "html_url": "https://rseng.github.io/software/repository/github/pkestene/xsmurf", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/xsmurf"}, {"uid": "github/pkestene/ramsesGPU", "html_url": "https://rseng.github.io/software/repository/github/pkestene/ramsesGPU", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/ramsesGPU"}, {"uid": "github/SkywalkerLuke/TransHLA", "html_url": "https://rseng.github.io/software/repository/github/SkywalkerLuke/TransHLA", "api_url": "https://rseng.github.io/software/api/repos/github/SkywalkerLuke/TransHLA"}, {"uid": "github/parthenon-hpc-lab/parthenon", "html_url": "https://rseng.github.io/software/repository/github/parthenon-hpc-lab/parthenon", "api_url": "https://rseng.github.io/software/api/repos/github/parthenon-hpc-lab/parthenon"}, {"uid": "github/PGB-LIV/MHCVision", "html_url": "https://rseng.github.io/software/repository/github/PGB-LIV/MHCVision", "api_url": "https://rseng.github.io/software/api/repos/github/PGB-LIV/MHCVision"}, {"uid": "github/devries/analytic_infall", "html_url": "https://rseng.github.io/software/repository/github/devries/analytic_infall", "api_url": "https://rseng.github.io/software/api/repos/github/devries/analytic_infall"}, {"uid": "github/sneumann/xcms", "html_url": "https://rseng.github.io/software/repository/github/sneumann/xcms", "api_url": "https://rseng.github.io/software/api/repos/github/sneumann/xcms"}, {"uid": "github/JinxinMonash/PhageGE", "html_url": "https://rseng.github.io/software/repository/github/JinxinMonash/PhageGE", "api_url": "https://rseng.github.io/software/api/repos/github/JinxinMonash/PhageGE"}, {"uid": "github/fair-workflows/nanopub", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/nanopub", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/nanopub"}, {"uid": "github/fair-workflows/NanopubJL", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/NanopubJL", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/NanopubJL"}, {"uid": "github/fair-workflows/fairworkflows", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/fairworkflows", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/fairworkflows"}, {"uid": "github/fast-data-transfer/fdt", "html_url": "https://rseng.github.io/software/repository/github/fast-data-transfer/fdt", "api_url": "https://rseng.github.io/software/api/repos/github/fast-data-transfer/fdt"}, {"uid": "github/online-behaviour/find-journalists", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/find-journalists", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/find-journalists"}, {"uid": "github/online-behaviour/machine-learning", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/machine-learning", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/machine-learning"}, {"uid": "github/sdss/marvin", "html_url": "https://rseng.github.io/software/repository/github/sdss/marvin", "api_url": "https://rseng.github.io/software/api/repos/github/sdss/marvin"}, {"uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/AndreinaCastillo/Genie_manuscript_data_analysis"}, {"uid": "github/Nicole-DH/ACP-MLC", "html_url": "https://rseng.github.io/software/repository/github/Nicole-DH/ACP-MLC", "api_url": "https://rseng.github.io/software/api/repos/github/Nicole-DH/ACP-MLC"}, {"uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "html_url": "https://rseng.github.io/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "api_url": "https://rseng.github.io/software/api/repos/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever"}, {"uid": "github/KolmogorovLab/Severus", "html_url": "https://rseng.github.io/software/repository/github/KolmogorovLab/Severus", "api_url": "https://rseng.github.io/software/api/repos/github/KolmogorovLab/Severus"}, {"uid": "github/chandra-marx/marxs", "html_url": "https://rseng.github.io/software/repository/github/chandra-marx/marxs", "api_url": "https://rseng.github.io/software/api/repos/github/chandra-marx/marxs"}, {"uid": "github/jonschwenk/RivGraph", "html_url": "https://rseng.github.io/software/repository/github/jonschwenk/RivGraph", "api_url": "https://rseng.github.io/software/api/repos/github/jonschwenk/RivGraph"}, {"uid": "github/coccoinomane/song", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/song", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/song"}, {"uid": "github/coccoinomane/zelda", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/zelda", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/zelda"}, {"uid": "github/ylxu05/HN-PPISP", "html_url": "https://rseng.github.io/software/repository/github/ylxu05/HN-PPISP", "api_url": "https://rseng.github.io/software/api/repos/github/ylxu05/HN-PPISP"}, {"uid": "github/stegmaja/TSE", "html_url": "https://rseng.github.io/software/repository/github/stegmaja/TSE", "api_url": "https://rseng.github.io/software/api/repos/github/stegmaja/TSE"}, {"uid": "github/zjupgx/modig", "html_url": "https://rseng.github.io/software/repository/github/zjupgx/modig", "api_url": "https://rseng.github.io/software/api/repos/github/zjupgx/modig"}, {"uid": "github/Crompulence/cpl-library", "html_url": "https://rseng.github.io/software/repository/github/Crompulence/cpl-library", "api_url": "https://rseng.github.io/software/api/repos/github/Crompulence/cpl-library"}, {"uid": "github/agurvich/FIRE_studio", "html_url": "https://rseng.github.io/software/repository/github/agurvich/FIRE_studio", "api_url": "https://rseng.github.io/software/api/repos/github/agurvich/FIRE_studio"}, {"uid": "github/wilsonrljr/sysidentpy", "html_url": "https://rseng.github.io/software/repository/github/wilsonrljr/sysidentpy", "api_url": "https://rseng.github.io/software/api/repos/github/wilsonrljr/sysidentpy"}, {"uid": "github/rcsb/mmtf-python", "html_url": "https://rseng.github.io/software/repository/github/rcsb/mmtf-python", "api_url": "https://rseng.github.io/software/api/repos/github/rcsb/mmtf-python"}, {"uid": "github/918particle/AskaryanModule", "html_url": "https://rseng.github.io/software/repository/github/918particle/AskaryanModule", "api_url": "https://rseng.github.io/software/api/repos/github/918particle/AskaryanModule"}, {"uid": "github/astronomyk/SimCADO", "html_url": "https://rseng.github.io/software/repository/github/astronomyk/SimCADO", "api_url": "https://rseng.github.io/software/api/repos/github/astronomyk/SimCADO"}, {"uid": "github/VarStarDetect/varstardetect", "html_url": "https://rseng.github.io/software/repository/github/VarStarDetect/varstardetect", "api_url": "https://rseng.github.io/software/api/repos/github/VarStarDetect/varstardetect"}, {"uid": "github/e-koch/FilFinder", "html_url": "https://rseng.github.io/software/repository/github/e-koch/FilFinder", "api_url": "https://rseng.github.io/software/api/repos/github/e-koch/FilFinder"}, {"uid": "github/PedroBarbosa/VETA", "html_url": "https://rseng.github.io/software/repository/github/PedroBarbosa/VETA", "api_url": "https://rseng.github.io/software/api/repos/github/PedroBarbosa/VETA"}, {"uid": "github/kdmurray91/axe", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/axe", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/axe"}, {"uid": "github/kdmurray91/libqcpp", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqcpp", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqcpp"}, {"uid": "github/kdmurray91/libqes", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqes", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqes"}, {"uid": "github/agombolay/ribose-map", "html_url": "https://rseng.github.io/software/repository/github/agombolay/ribose-map", "api_url": "https://rseng.github.io/software/api/repos/github/agombolay/ribose-map"}, {"uid": "github/brainglobe/bg-atlasapi", "html_url": "https://rseng.github.io/software/repository/github/brainglobe/bg-atlasapi", "api_url": "https://rseng.github.io/software/api/repos/github/brainglobe/bg-atlasapi"}, {"uid": "github/bvalot/pyMLST", "html_url": "https://rseng.github.io/software/repository/github/bvalot/pyMLST", "api_url": "https://rseng.github.io/software/api/repos/github/bvalot/pyMLST"}, {"uid": "github/emsig/elfe3D", "html_url": "https://rseng.github.io/software/repository/github/emsig/elfe3D", "api_url": "https://rseng.github.io/software/api/repos/github/emsig/elfe3D"}, {"uid": "github/glasgowlab/MAGPIE", "html_url": "https://rseng.github.io/software/repository/github/glasgowlab/MAGPIE", "api_url": "https://rseng.github.io/software/api/repos/github/glasgowlab/MAGPIE"}, {"uid": "github/dingshandeng/diskmint", "html_url": "https://rseng.github.io/software/repository/github/dingshandeng/diskmint", "api_url": "https://rseng.github.io/software/api/repos/github/dingshandeng/diskmint"}, {"uid": "github/forceflow1049/phast", "html_url": "https://rseng.github.io/software/repository/github/forceflow1049/phast", "api_url": "https://rseng.github.io/software/api/repos/github/forceflow1049/phast"}, {"uid": "github/bcgsc/ntCard", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntCard", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntCard"}, {"uid": "github/bcgsc/TMBur", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/TMBur", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/TMBur"}, {"uid": "github/bcgsc/btllib", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/btllib", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/btllib"}, {"uid": "github/bcgsc/goldrush", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/goldrush", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/goldrush"}, {"uid": "github/bcgsc/longstitch", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/longstitch", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/longstitch"}, {"uid": "github/bcgsc/arcs", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/arcs", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/arcs"}, {"uid": "github/bcgsc/ntHash", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntHash", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntHash"}, {"uid": "github/bcgsc/abyss", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/abyss", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/abyss"}, {"uid": "github/bcgsc/NanoSim", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/NanoSim", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/NanoSim"}, {"uid": "github/bcgsc/tigmint", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/tigmint", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/tigmint"}, {"uid": "github/winni2k/abeona", "html_url": "https://rseng.github.io/software/repository/github/winni2k/abeona", "api_url": "https://rseng.github.io/software/api/repos/github/winni2k/abeona"}, {"uid": "github/mudit-jain90/i-SPin", "html_url": "https://rseng.github.io/software/repository/github/mudit-jain90/i-SPin", "api_url": "https://rseng.github.io/software/api/repos/github/mudit-jain90/i-SPin"}, {"uid": "github/dask/dask", "html_url": "https://rseng.github.io/software/repository/github/dask/dask", "api_url": "https://rseng.github.io/software/api/repos/github/dask/dask"}, {"uid": "github/levitsky/pyteomics", "html_url": "https://rseng.github.io/software/repository/github/levitsky/pyteomics", "api_url": "https://rseng.github.io/software/api/repos/github/levitsky/pyteomics"}, {"uid": "github/euroargodev/argopy", "html_url": "https://rseng.github.io/software/repository/github/euroargodev/argopy", "api_url": "https://rseng.github.io/software/api/repos/github/euroargodev/argopy"}, {"uid": "github/cellgeni/cells2visium", "html_url": "https://rseng.github.io/software/repository/github/cellgeni/cells2visium", "api_url": "https://rseng.github.io/software/api/repos/github/cellgeni/cells2visium"}, {"uid": "github/oloBion/Retip", "html_url": "https://rseng.github.io/software/repository/github/oloBion/Retip", "api_url": "https://rseng.github.io/software/api/repos/github/oloBion/Retip"}, {"uid": "github/JacksonBurns/astartes", "html_url": "https://rseng.github.io/software/repository/github/JacksonBurns/astartes", "api_url": "https://rseng.github.io/software/api/repos/github/JacksonBurns/astartes"}, {"uid": "github/toruseo/UXsim", "html_url": "https://rseng.github.io/software/repository/github/toruseo/UXsim", "api_url": "https://rseng.github.io/software/api/repos/github/toruseo/UXsim"}, {"uid": "github/cheerfuluser/tessreduce", "html_url": "https://rseng.github.io/software/repository/github/cheerfuluser/tessreduce", "api_url": "https://rseng.github.io/software/api/repos/github/cheerfuluser/tessreduce"}, {"uid": "github/aadya940/chainopy", "html_url": "https://rseng.github.io/software/repository/github/aadya940/chainopy", "api_url": "https://rseng.github.io/software/api/repos/github/aadya940/chainopy"}, {"uid": "github/ywx649999311/vizic", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/vizic", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/vizic"}, {"uid": "github/ywx649999311/EzTao", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/EzTao", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/EzTao"}, {"uid": "github/forrest-lab/scMatch", "html_url": "https://rseng.github.io/software/repository/github/forrest-lab/scMatch", "api_url": "https://rseng.github.io/software/api/repos/github/forrest-lab/scMatch"}, {"uid": "github/abonaldi/TRECS", "html_url": "https://rseng.github.io/software/repository/github/abonaldi/TRECS", "api_url": "https://rseng.github.io/software/api/repos/github/abonaldi/TRECS"}, {"uid": "github/youngkaneda/DemeterWatch", "html_url": "https://rseng.github.io/software/repository/github/youngkaneda/DemeterWatch", "api_url": "https://rseng.github.io/software/api/repos/github/youngkaneda/DemeterWatch"}, {"uid": "github/nhurleywalker/fits_warp", "html_url": "https://rseng.github.io/software/repository/github/nhurleywalker/fits_warp", "api_url": "https://rseng.github.io/software/api/repos/github/nhurleywalker/fits_warp"}, {"uid": "github/bids-apps/giga_connectome", "html_url": "https://rseng.github.io/software/repository/github/bids-apps/giga_connectome", "api_url": "https://rseng.github.io/software/api/repos/github/bids-apps/giga_connectome"}, {"uid": "github/STEllAR-GROUP/hpx", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/hpx", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/hpx"}, {"uid": "github/STEllAR-GROUP/octotiger", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/octotiger", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/octotiger"}, {"uid": "github/DenaJGibbon/gibbonNetR", "html_url": "https://rseng.github.io/software/repository/github/DenaJGibbon/gibbonNetR", "api_url": "https://rseng.github.io/software/api/repos/github/DenaJGibbon/gibbonNetR"}, {"uid": "github/institut-de-genomique/HAPO-G", "html_url": "https://rseng.github.io/software/repository/github/institut-de-genomique/HAPO-G", "api_url": "https://rseng.github.io/software/api/repos/github/institut-de-genomique/HAPO-G"}, {"uid": "github/amkram/shusher", "html_url": "https://rseng.github.io/software/repository/github/amkram/shusher", "api_url": "https://rseng.github.io/software/api/repos/github/amkram/shusher"}, {"uid": "github/rhyspoulton/OrbWeaver", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/OrbWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/OrbWeaver"}, {"uid": "github/rhyspoulton/WhereWolf", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/WhereWolf", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/WhereWolf"}, {"uid": "github/tfwillems/HipSTR", "html_url": "https://rseng.github.io/software/repository/github/tfwillems/HipSTR", "api_url": "https://rseng.github.io/software/api/repos/github/tfwillems/HipSTR"}, {"uid": "github/david-bogdan-r/ARTEMIS", "html_url": "https://rseng.github.io/software/repository/github/david-bogdan-r/ARTEMIS", "api_url": "https://rseng.github.io/software/api/repos/github/david-bogdan-r/ARTEMIS"}, {"uid": "github/schulze61/RhoPop", "html_url": "https://rseng.github.io/software/repository/github/schulze61/RhoPop", "api_url": "https://rseng.github.io/software/api/repos/github/schulze61/RhoPop"}, {"uid": "github/idefix-code/idefix", "html_url": "https://rseng.github.io/software/repository/github/idefix-code/idefix", "api_url": "https://rseng.github.io/software/api/repos/github/idefix-code/idefix"}, {"uid": "github/mawenlong2016/DeepAnnotation", "html_url": "https://rseng.github.io/software/repository/github/mawenlong2016/DeepAnnotation", "api_url": "https://rseng.github.io/software/api/repos/github/mawenlong2016/DeepAnnotation"}, {"uid": "github/galsci/pysm", "html_url": "https://rseng.github.io/software/repository/github/galsci/pysm", "api_url": "https://rseng.github.io/software/api/repos/github/galsci/pysm"}, {"uid": "github/leishenggit/CircleBase", "html_url": "https://rseng.github.io/software/repository/github/leishenggit/CircleBase", "api_url": "https://rseng.github.io/software/api/repos/github/leishenggit/CircleBase"}, {"uid": "github/tool-bin/ukbcc", "html_url": "https://rseng.github.io/software/repository/github/tool-bin/ukbcc", "api_url": "https://rseng.github.io/software/api/repos/github/tool-bin/ukbcc"}, {"uid": "github/Quantum-Dynamics-Hub/libra-code", "html_url": "https://rseng.github.io/software/repository/github/Quantum-Dynamics-Hub/libra-code", "api_url": "https://rseng.github.io/software/api/repos/github/Quantum-Dynamics-Hub/libra-code"}, {"uid": "github/InfOmics/PanDelos-frags", "html_url": "https://rseng.github.io/software/repository/github/InfOmics/PanDelos-frags", "api_url": "https://rseng.github.io/software/api/repos/github/InfOmics/PanDelos-frags"}, {"uid": "github/Genentech/SPEX", "html_url": "https://rseng.github.io/software/repository/github/Genentech/SPEX", "api_url": "https://rseng.github.io/software/api/repos/github/Genentech/SPEX"}, {"uid": "github/max0x7ba/atomic_queue", "html_url": "https://rseng.github.io/software/repository/github/max0x7ba/atomic_queue", "api_url": "https://rseng.github.io/software/api/repos/github/max0x7ba/atomic_queue"}, {"uid": "github/AndrewAnnex/SpiceyPy", "html_url": "https://rseng.github.io/software/repository/github/AndrewAnnex/SpiceyPy", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewAnnex/SpiceyPy"}, {"uid": "github/tsipkens/atems", "html_url": "https://rseng.github.io/software/repository/github/tsipkens/atems", "api_url": "https://rseng.github.io/software/api/repos/github/tsipkens/atems"}, {"uid": "github/mscaudill/openseize", "html_url": "https://rseng.github.io/software/repository/github/mscaudill/openseize", "api_url": "https://rseng.github.io/software/api/repos/github/mscaudill/openseize"}, {"uid": "github/NickSwainston/pulsar_spectra", "html_url": "https://rseng.github.io/software/repository/github/NickSwainston/pulsar_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/NickSwainston/pulsar_spectra"}, {"uid": "github/GreycLab/gmic", "html_url": "https://rseng.github.io/software/repository/github/GreycLab/gmic", "api_url": "https://rseng.github.io/software/api/repos/github/GreycLab/gmic"}, {"uid": "github/MonashSmartStructures/ospgrillage", "html_url": "https://rseng.github.io/software/repository/github/MonashSmartStructures/ospgrillage", "api_url": "https://rseng.github.io/software/api/repos/github/MonashSmartStructures/ospgrillage"}, {"uid": "github/joboog/r2ogs6", "html_url": "https://rseng.github.io/software/repository/github/joboog/r2ogs6", "api_url": "https://rseng.github.io/software/api/repos/github/joboog/r2ogs6"}, {"uid": "github/GiMattia/PyPLUTO", "html_url": "https://rseng.github.io/software/repository/github/GiMattia/PyPLUTO", "api_url": "https://rseng.github.io/software/api/repos/github/GiMattia/PyPLUTO"}, {"uid": "github/FengTaoSMU/MOBFinder", "html_url": "https://rseng.github.io/software/repository/github/FengTaoSMU/MOBFinder", "api_url": "https://rseng.github.io/software/api/repos/github/FengTaoSMU/MOBFinder"}, {"uid": "github/jmackereth/orbit-estimation", "html_url": "https://rseng.github.io/software/repository/github/jmackereth/orbit-estimation", "api_url": "https://rseng.github.io/software/api/repos/github/jmackereth/orbit-estimation"}, {"uid": "github/fhtouma/subgen2", "html_url": "https://rseng.github.io/software/repository/github/fhtouma/subgen2", "api_url": "https://rseng.github.io/software/api/repos/github/fhtouma/subgen2"}, {"uid": "github/ssadedin/bazam", "html_url": "https://rseng.github.io/software/repository/github/ssadedin/bazam", "api_url": "https://rseng.github.io/software/api/repos/github/ssadedin/bazam"}, {"uid": "github/Jurgenvilla/moons-sim", "html_url": "https://rseng.github.io/software/repository/github/Jurgenvilla/moons-sim", "api_url": "https://rseng.github.io/software/api/repos/github/Jurgenvilla/moons-sim"}, {"uid": "github/MichelleLochner/astronomaly", "html_url": "https://rseng.github.io/software/repository/github/MichelleLochner/astronomaly", "api_url": "https://rseng.github.io/software/api/repos/github/MichelleLochner/astronomaly"}, {"uid": "github/TabeaSonnenschein/UrbHealth-ABM", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/UrbHealth-ABM"}, {"uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions"}, {"uid": "github/TabeaSonnenschein/GenSynthPop", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/GenSynthPop", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/GenSynthPop"}, {"uid": "github/TabeaSonnenschein/CellAutDisp", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/CellAutDisp", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/CellAutDisp"}, {"uid": "github/CGAL/cgal", "html_url": "https://rseng.github.io/software/repository/github/CGAL/cgal", "api_url": "https://rseng.github.io/software/api/repos/github/CGAL/cgal"}, {"uid": "github/starkit/wsynphot", "html_url": "https://rseng.github.io/software/repository/github/starkit/wsynphot", "api_url": "https://rseng.github.io/software/api/repos/github/starkit/wsynphot"}, {"uid": "github/IPK-BIT/divbrowse", "html_url": "https://rseng.github.io/software/repository/github/IPK-BIT/divbrowse", "api_url": "https://rseng.github.io/software/api/repos/github/IPK-BIT/divbrowse"}, {"uid": "github/javicarron/pynkowski", "html_url": "https://rseng.github.io/software/repository/github/javicarron/pynkowski", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/pynkowski"}, {"uid": "github/javicarron/mtneedlet", "html_url": "https://rseng.github.io/software/repository/github/javicarron/mtneedlet", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/mtneedlet"}, {"uid": "github/qqpigass/FREEPII", "html_url": "https://rseng.github.io/software/repository/github/qqpigass/FREEPII", "api_url": "https://rseng.github.io/software/api/repos/github/qqpigass/FREEPII"}, {"uid": "github/sbailey/empca", "html_url": "https://rseng.github.io/software/repository/github/sbailey/empca", "api_url": "https://rseng.github.io/software/api/repos/github/sbailey/empca"}, {"uid": "github/unfoldtoolbox/UnfoldSim.jl", "html_url": "https://rseng.github.io/software/repository/github/unfoldtoolbox/UnfoldSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/unfoldtoolbox/UnfoldSim.jl"}, {"uid": "github/JIBSIL/DistriFS", "html_url": "https://rseng.github.io/software/repository/github/JIBSIL/DistriFS", "api_url": "https://rseng.github.io/software/api/repos/github/JIBSIL/DistriFS"}, {"uid": "github/manzt/anywidget", "html_url": "https://rseng.github.io/software/repository/github/manzt/anywidget", "api_url": "https://rseng.github.io/software/api/repos/github/manzt/anywidget"}, {"uid": "github/BGPS/distance-omnibus", "html_url": "https://rseng.github.io/software/repository/github/BGPS/distance-omnibus", "api_url": "https://rseng.github.io/software/api/repos/github/BGPS/distance-omnibus"}, {"uid": "github/dshawul/NebulaSEM", "html_url": "https://rseng.github.io/software/repository/github/dshawul/NebulaSEM", "api_url": "https://rseng.github.io/software/api/repos/github/dshawul/NebulaSEM"}, {"uid": "github/datngu/Circall", "html_url": "https://rseng.github.io/software/repository/github/datngu/Circall", "api_url": "https://rseng.github.io/software/api/repos/github/datngu/Circall"}, {"uid": "github/Jesper-Karsten/MBASC", "html_url": "https://rseng.github.io/software/repository/github/Jesper-Karsten/MBASC", "api_url": "https://rseng.github.io/software/api/repos/github/Jesper-Karsten/MBASC"}, {"uid": "github/jgagneastro/CoMover", "html_url": "https://rseng.github.io/software/repository/github/jgagneastro/CoMover", "api_url": "https://rseng.github.io/software/api/repos/github/jgagneastro/CoMover"}, {"uid": "github/flaminiafortuni/FORECAST", "html_url": "https://rseng.github.io/software/repository/github/flaminiafortuni/FORECAST", "api_url": "https://rseng.github.io/software/api/repos/github/flaminiafortuni/FORECAST"}, {"uid": "github/online-ml/deep-river", "html_url": "https://rseng.github.io/software/repository/github/online-ml/deep-river", "api_url": "https://rseng.github.io/software/api/repos/github/online-ml/deep-river"}, {"uid": "github/rmjarvis/Piff", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/Piff", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/Piff"}, {"uid": "github/rmjarvis/TreeCorr", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/TreeCorr", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/TreeCorr"}, {"uid": "github/donishadsmith/neurocaps", "html_url": "https://rseng.github.io/software/repository/github/donishadsmith/neurocaps", "api_url": "https://rseng.github.io/software/api/repos/github/donishadsmith/neurocaps"}, {"uid": "github/octopus-sensing/octopus-sensing", "html_url": "https://rseng.github.io/software/repository/github/octopus-sensing/octopus-sensing", "api_url": "https://rseng.github.io/software/api/repos/github/octopus-sensing/octopus-sensing"}, {"uid": "github/toddy15/medicalterms", "html_url": "https://rseng.github.io/software/repository/github/toddy15/medicalterms", "api_url": "https://rseng.github.io/software/api/repos/github/toddy15/medicalterms"}, {"uid": "github/rivasiker/PhaseTypeR", "html_url": "https://rseng.github.io/software/repository/github/rivasiker/PhaseTypeR", "api_url": "https://rseng.github.io/software/api/repos/github/rivasiker/PhaseTypeR"}, {"uid": "github/sterinaldi/FIGARO", "html_url": "https://rseng.github.io/software/repository/github/sterinaldi/FIGARO", "api_url": "https://rseng.github.io/software/api/repos/github/sterinaldi/FIGARO"}, {"uid": "github/indrops/indrops", "html_url": "https://rseng.github.io/software/repository/github/indrops/indrops", "api_url": "https://rseng.github.io/software/api/repos/github/indrops/indrops"}, {"uid": "github/ComputationalPhysiology/simcardems", "html_url": "https://rseng.github.io/software/repository/github/ComputationalPhysiology/simcardems", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalPhysiology/simcardems"}, {"uid": "github/tkzeng/Pangolin", "html_url": "https://rseng.github.io/software/repository/github/tkzeng/Pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/tkzeng/Pangolin"}, {"uid": "github/mommermi/photometrypipeline", "html_url": "https://rseng.github.io/software/repository/github/mommermi/photometrypipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mommermi/photometrypipeline"}, {"uid": "github/lgbouma/gyro-interp", "html_url": "https://rseng.github.io/software/repository/github/lgbouma/gyro-interp", "api_url": "https://rseng.github.io/software/api/repos/github/lgbouma/gyro-interp"}, {"uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", "html_url": "https://rseng.github.io/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", "api_url": "https://rseng.github.io/software/api/repos/github/Biomedical-Imaging-Group/Steer-n-Detect"}, {"uid": "github/christinahedges/TESS-SIP", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/TESS-SIP", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/TESS-SIP"}, {"uid": "github/christinahedges/contaminante", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/contaminante", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/contaminante"}, {"uid": "github/PeterDenton/ANA", "html_url": "https://rseng.github.io/software/repository/github/PeterDenton/ANA", "api_url": "https://rseng.github.io/software/api/repos/github/PeterDenton/ANA"}, {"uid": "github/USU-Analytics-Solution-Center/Bruno.jl", "html_url": "https://rseng.github.io/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", "api_url": "https://rseng.github.io/software/api/repos/github/USU-Analytics-Solution-Center/Bruno.jl"}, {"uid": "github/szymon-datalions/pyinterpolate", "html_url": "https://rseng.github.io/software/repository/github/szymon-datalions/pyinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/szymon-datalions/pyinterpolate"}, {"uid": "github/samsledje/ConPLex_dev", "html_url": "https://rseng.github.io/software/repository/github/samsledje/ConPLex_dev", "api_url": "https://rseng.github.io/software/api/repos/github/samsledje/ConPLex_dev"}, {"uid": "github/trchudley/pdemtools", "html_url": "https://rseng.github.io/software/repository/github/trchudley/pdemtools", "api_url": "https://rseng.github.io/software/api/repos/github/trchudley/pdemtools"}, {"uid": "github/kim554/wdec", "html_url": "https://rseng.github.io/software/repository/github/kim554/wdec", "api_url": "https://rseng.github.io/software/api/repos/github/kim554/wdec"}, {"uid": "github/ericagol/NbodyGradient.jl", "html_url": "https://rseng.github.io/software/repository/github/ericagol/NbodyGradient.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/NbodyGradient.jl"}, {"uid": "github/ericagol/TTVFaster", "html_url": "https://rseng.github.io/software/repository/github/ericagol/TTVFaster", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/TTVFaster"}, {"uid": "github/Planet-AI-GmbH/tfaip", "html_url": "https://rseng.github.io/software/repository/github/Planet-AI-GmbH/tfaip", "api_url": "https://rseng.github.io/software/api/repos/github/Planet-AI-GmbH/tfaip"}, {"uid": "github/MolecularAI/DockStreamCommunity", "html_url": "https://rseng.github.io/software/repository/github/MolecularAI/DockStreamCommunity", "api_url": "https://rseng.github.io/software/api/repos/github/MolecularAI/DockStreamCommunity"}, {"uid": "github/markfortune/luas", "html_url": "https://rseng.github.io/software/repository/github/markfortune/luas", "api_url": "https://rseng.github.io/software/api/repos/github/markfortune/luas"}, {"uid": "github/brian-team/brian2", "html_url": "https://rseng.github.io/software/repository/github/brian-team/brian2", "api_url": "https://rseng.github.io/software/api/repos/github/brian-team/brian2"}, {"uid": "github/benedictpaten/marginPhase", "html_url": "https://rseng.github.io/software/repository/github/benedictpaten/marginPhase", "api_url": "https://rseng.github.io/software/api/repos/github/benedictpaten/marginPhase"}, {"uid": "github/afukushima/DiffCorr", "html_url": "https://rseng.github.io/software/repository/github/afukushima/DiffCorr", "api_url": "https://rseng.github.io/software/api/repos/github/afukushima/DiffCorr"}, {"uid": "github/Jeremycouturier/NcorpiON", "html_url": "https://rseng.github.io/software/repository/github/Jeremycouturier/NcorpiON", "api_url": "https://rseng.github.io/software/api/repos/github/Jeremycouturier/NcorpiON"}, {"uid": "github/mgm8/pyngham", "html_url": "https://rseng.github.io/software/repository/github/mgm8/pyngham", "api_url": "https://rseng.github.io/software/api/repos/github/mgm8/pyngham"}, {"uid": "github/lofar-astron/DP3", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/DP3", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/DP3"}, {"uid": "github/lofar-astron/RMextract", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/RMextract", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/RMextract"}, {"uid": "github/ANSES-Ploufragan/vvv2_display", "html_url": "https://rseng.github.io/software/repository/github/ANSES-Ploufragan/vvv2_display", "api_url": "https://rseng.github.io/software/api/repos/github/ANSES-Ploufragan/vvv2_display"}, {"uid": "github/PaulKuin/uvotpy", "html_url": "https://rseng.github.io/software/repository/github/PaulKuin/uvotpy", "api_url": "https://rseng.github.io/software/api/repos/github/PaulKuin/uvotpy"}, {"uid": "github/nickfarrow/GalacticDNSMass", "html_url": "https://rseng.github.io/software/repository/github/nickfarrow/GalacticDNSMass", "api_url": "https://rseng.github.io/software/api/repos/github/nickfarrow/GalacticDNSMass"}, {"uid": "github/DeepRegNet/DeepReg", "html_url": "https://rseng.github.io/software/repository/github/DeepRegNet/DeepReg", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRegNet/DeepReg"}, {"uid": "github/JCGonzS/mechnetor", "html_url": "https://rseng.github.io/software/repository/github/JCGonzS/mechnetor", "api_url": "https://rseng.github.io/software/api/repos/github/JCGonzS/mechnetor"}, {"uid": "github/JuliaMatrices/BandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BlockBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BlockBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/LazyBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/LazyBandedMatrices.jl"}, {"uid": "github/RoryChenXY/DataRepExp_public", "html_url": "https://rseng.github.io/software/repository/github/RoryChenXY/DataRepExp_public", "api_url": "https://rseng.github.io/software/api/repos/github/RoryChenXY/DataRepExp_public"}, {"uid": "github/a8864666-rgb/fgoc", "html_url": "https://rseng.github.io/software/repository/github/a8864666-rgb/fgoc", "api_url": "https://rseng.github.io/software/api/repos/github/a8864666-rgb/fgoc"}, {"uid": "github/ahwkuepper/mcluster", "html_url": "https://rseng.github.io/software/repository/github/ahwkuepper/mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/ahwkuepper/mcluster"}, {"uid": "github/alicia-ziying-yang/conTEXT-explorer", "html_url": "https://rseng.github.io/software/repository/github/alicia-ziying-yang/conTEXT-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/alicia-ziying-yang/conTEXT-explorer"}, {"uid": "github/USNavalResearchLaboratory/eispac", "html_url": "https://rseng.github.io/software/repository/github/USNavalResearchLaboratory/eispac", "api_url": "https://rseng.github.io/software/api/repos/github/USNavalResearchLaboratory/eispac"}, {"uid": "github/cabb99/open3spn2", "html_url": "https://rseng.github.io/software/repository/github/cabb99/open3spn2", "api_url": "https://rseng.github.io/software/api/repos/github/cabb99/open3spn2"}, {"uid": "github/rehamelkholy/NutMaat", "html_url": "https://rseng.github.io/software/repository/github/rehamelkholy/NutMaat", "api_url": "https://rseng.github.io/software/api/repos/github/rehamelkholy/NutMaat"}, {"uid": "github/JPenuchot/ctbench", "html_url": "https://rseng.github.io/software/repository/github/JPenuchot/ctbench", "api_url": "https://rseng.github.io/software/api/repos/github/JPenuchot/ctbench"}, {"uid": "github/raphael-group/chisel", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/chisel", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/chisel"}, {"uid": "github/raphael-group/hatchet", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/hatchet", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/hatchet"}, {"uid": "github/COMBINE-lab/cuttlefish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/cuttlefish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/cuttlefish"}, {"uid": "github/COMBINE-lab/RapMap", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/RapMap", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/RapMap"}, {"uid": "github/COMBINE-lab/libgff", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/libgff", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/libgff"}, {"uid": "github/COMBINE-lab/oarfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/oarfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/oarfish"}, {"uid": "github/COMBINE-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/salmon"}, {"uid": "github/COMBINE-lab/pufferfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/pufferfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/pufferfish"}, {"uid": "github/COMBINE-lab/terminus", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/terminus", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/terminus"}, {"uid": "github/COMBINE-lab/simpleaf", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/simpleaf", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/simpleaf"}, {"uid": "github/COMBINE-lab/alevin-fry", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/alevin-fry", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/alevin-fry"}, {"uid": "github/acil-bwh/bayes_traj", "html_url": "https://rseng.github.io/software/repository/github/acil-bwh/bayes_traj", "api_url": "https://rseng.github.io/software/api/repos/github/acil-bwh/bayes_traj"}, {"uid": "github/soedinglab/spacepharer", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/spacepharer", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/spacepharer"}, {"uid": "github/soedinglab/hh-suite", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/hh-suite", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/hh-suite"}, {"uid": "github/soedinglab/metaeuk", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/metaeuk", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/metaeuk"}, {"uid": "github/soedinglab/MMseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/MMseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/MMseqs2"}, {"uid": "github/soedinglab/plass", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/plass", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/plass"}, {"uid": "github/soedinglab/mmseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/mmseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/mmseqs2"}, {"uid": "github/IRL2/nanover-server-py", "html_url": "https://rseng.github.io/software/repository/github/IRL2/nanover-server-py", "api_url": "https://rseng.github.io/software/api/repos/github/IRL2/nanover-server-py"}, {"uid": "github/dlakaplan/pulsarsurveyscraper", "html_url": "https://rseng.github.io/software/repository/github/dlakaplan/pulsarsurveyscraper", "api_url": "https://rseng.github.io/software/api/repos/github/dlakaplan/pulsarsurveyscraper"}, {"uid": "github/jadexter/grtrans", "html_url": "https://rseng.github.io/software/repository/github/jadexter/grtrans", "api_url": "https://rseng.github.io/software/api/repos/github/jadexter/grtrans"}, {"uid": "github/BritishGeologicalSurvey/pyvolcans", "html_url": "https://rseng.github.io/software/repository/github/BritishGeologicalSurvey/pyvolcans", "api_url": "https://rseng.github.io/software/api/repos/github/BritishGeologicalSurvey/pyvolcans"}, {"uid": "github/JulianZDing/UniMAP", "html_url": "https://rseng.github.io/software/repository/github/JulianZDing/UniMAP", "api_url": "https://rseng.github.io/software/api/repos/github/JulianZDing/UniMAP"}, {"uid": "github/srdc/onfhir", "html_url": "https://rseng.github.io/software/repository/github/srdc/onfhir", "api_url": "https://rseng.github.io/software/api/repos/github/srdc/onfhir"}, {"uid": "github/fedbiomed/fedbiomed", "html_url": "https://rseng.github.io/software/repository/github/fedbiomed/fedbiomed", "api_url": "https://rseng.github.io/software/api/repos/github/fedbiomed/fedbiomed"}, {"uid": "github/mauropieroni/fastpta", "html_url": "https://rseng.github.io/software/repository/github/mauropieroni/fastpta", "api_url": "https://rseng.github.io/software/api/repos/github/mauropieroni/fastpta"}, {"uid": "github/TRACER-LULab/Hyperelastics.jl", "html_url": "https://rseng.github.io/software/repository/github/TRACER-LULab/Hyperelastics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TRACER-LULab/Hyperelastics.jl"}, {"uid": "github/mzemp/halogen", "html_url": "https://rseng.github.io/software/repository/github/mzemp/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/mzemp/halogen"}, {"uid": "github/itsoulos/GlobalOptimus", "html_url": "https://rseng.github.io/software/repository/github/itsoulos/GlobalOptimus", "api_url": "https://rseng.github.io/software/api/repos/github/itsoulos/GlobalOptimus"}, {"uid": "github/agshumate/LiftoffTools", "html_url": "https://rseng.github.io/software/repository/github/agshumate/LiftoffTools", "api_url": "https://rseng.github.io/software/api/repos/github/agshumate/LiftoffTools"}, {"uid": "github/9505-PNNL/wmpy_power", "html_url": "https://rseng.github.io/software/repository/github/9505-PNNL/wmpy_power", "api_url": "https://rseng.github.io/software/api/repos/github/9505-PNNL/wmpy_power"}, {"uid": "github/MesquiteProject/MesquiteCore", "html_url": "https://rseng.github.io/software/repository/github/MesquiteProject/MesquiteCore", "api_url": "https://rseng.github.io/software/api/repos/github/MesquiteProject/MesquiteCore"}, {"uid": "github/chiaraherzog/WIDclocks", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/WIDclocks", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/WIDclocks"}, {"uid": "github/chiaraherzog/eutopsQC", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/eutopsQC", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/eutopsQC"}, {"uid": "github/zhoux85/scAdapt", "html_url": "https://rseng.github.io/software/repository/github/zhoux85/scAdapt", "api_url": "https://rseng.github.io/software/api/repos/github/zhoux85/scAdapt"}, {"uid": "github/kreshuklab/plant-seg", "html_url": "https://rseng.github.io/software/repository/github/kreshuklab/plant-seg", "api_url": "https://rseng.github.io/software/api/repos/github/kreshuklab/plant-seg"}, {"uid": "github/Mat-dp/mat-dp-core", "html_url": "https://rseng.github.io/software/repository/github/Mat-dp/mat-dp-core", "api_url": "https://rseng.github.io/software/api/repos/github/Mat-dp/mat-dp-core"}, {"uid": "github/ComplexGroupInteractions/xgi", "html_url": "https://rseng.github.io/software/repository/github/ComplexGroupInteractions/xgi", "api_url": "https://rseng.github.io/software/api/repos/github/ComplexGroupInteractions/xgi"}, {"uid": "github/MichaelSel/edoJS", "html_url": "https://rseng.github.io/software/repository/github/MichaelSel/edoJS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelSel/edoJS"}, {"uid": "github/wpb-astro/MCSED", "html_url": "https://rseng.github.io/software/repository/github/wpb-astro/MCSED", "api_url": "https://rseng.github.io/software/api/repos/github/wpb-astro/MCSED"}, {"uid": "github/espnet/espnet", "html_url": "https://rseng.github.io/software/repository/github/espnet/espnet", "api_url": "https://rseng.github.io/software/api/repos/github/espnet/espnet"}, {"uid": "github/stefanofisc/dartvetter_apj", "html_url": "https://rseng.github.io/software/repository/github/stefanofisc/dartvetter_apj", "api_url": "https://rseng.github.io/software/api/repos/github/stefanofisc/dartvetter_apj"}, {"uid": "github/bio-phys/asyncmd", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/asyncmd", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/asyncmd"}, {"uid": "github/bio-phys/BioEn", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/BioEn", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/BioEn"}, {"uid": "github/MaceKuailv/seaduck", "html_url": "https://rseng.github.io/software/repository/github/MaceKuailv/seaduck", "api_url": "https://rseng.github.io/software/api/repos/github/MaceKuailv/seaduck"}, {"uid": "github/freemed/freeshim", "html_url": "https://rseng.github.io/software/repository/github/freemed/freeshim", "api_url": "https://rseng.github.io/software/api/repos/github/freemed/freeshim"}, {"uid": "github/D4san/MultiREx-public", "html_url": "https://rseng.github.io/software/repository/github/D4san/MultiREx-public", "api_url": "https://rseng.github.io/software/api/repos/github/D4san/MultiREx-public"}, {"uid": "github/hpparvi/MuSCAT2_transit_pipeline", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/MuSCAT2_transit_pipeline"}, {"uid": "github/hpparvi/spright", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/spright", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/spright"}, {"uid": "github/hpparvi/PyTransit", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/PyTransit", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/PyTransit"}, {"uid": "github/hpparvi/opents", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/opents", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/opents"}, {"uid": "github/hpparvi/ldtk", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/ldtk", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/ldtk"}, {"uid": "github/umami-hep/salt", "html_url": "https://rseng.github.io/software/repository/github/umami-hep/salt", "api_url": "https://rseng.github.io/software/api/repos/github/umami-hep/salt"}, {"uid": "github/trichter/yam", "html_url": "https://rseng.github.io/software/repository/github/trichter/yam", "api_url": "https://rseng.github.io/software/api/repos/github/trichter/yam"}, {"uid": "github/ivastar/clear", "html_url": "https://rseng.github.io/software/repository/github/ivastar/clear", "api_url": "https://rseng.github.io/software/api/repos/github/ivastar/clear"}, {"uid": "github/bio2byte/constava", "html_url": "https://rseng.github.io/software/repository/github/bio2byte/constava", "api_url": "https://rseng.github.io/software/api/repos/github/bio2byte/constava"}, {"uid": "github/INCF/one_click", "html_url": "https://rseng.github.io/software/repository/github/INCF/one_click", "api_url": "https://rseng.github.io/software/api/repos/github/INCF/one_click"}, {"uid": "github/hannorein/rebound", "html_url": "https://rseng.github.io/software/repository/github/hannorein/rebound", "api_url": "https://rseng.github.io/software/api/repos/github/hannorein/rebound"}, {"uid": "github/cersonsky-lab/AniSOAP", "html_url": "https://rseng.github.io/software/repository/github/cersonsky-lab/AniSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/cersonsky-lab/AniSOAP"}, {"uid": "github/tofflemire/saphires", "html_url": "https://rseng.github.io/software/repository/github/tofflemire/saphires", "api_url": "https://rseng.github.io/software/api/repos/github/tofflemire/saphires"}, {"uid": "github/amkozlov/raxml-ng", "html_url": "https://rseng.github.io/software/repository/github/amkozlov/raxml-ng", "api_url": "https://rseng.github.io/software/api/repos/github/amkozlov/raxml-ng"}, {"uid": "github/samuelefiorini/tangle", "html_url": "https://rseng.github.io/software/repository/github/samuelefiorini/tangle", "api_url": "https://rseng.github.io/software/api/repos/github/samuelefiorini/tangle"}, {"uid": "github/oncoray/mirp", "html_url": "https://rseng.github.io/software/repository/github/oncoray/mirp", "api_url": "https://rseng.github.io/software/api/repos/github/oncoray/mirp"}, {"uid": "github/cbrueffer/tophat-recondition", "html_url": "https://rseng.github.io/software/repository/github/cbrueffer/tophat-recondition", "api_url": "https://rseng.github.io/software/api/repos/github/cbrueffer/tophat-recondition"}, {"uid": "github/heli-xu/findSVI", "html_url": "https://rseng.github.io/software/repository/github/heli-xu/findSVI", "api_url": "https://rseng.github.io/software/api/repos/github/heli-xu/findSVI"}, {"uid": "github/LucaJRossi/NIGO", "html_url": "https://rseng.github.io/software/repository/github/LucaJRossi/NIGO", "api_url": "https://rseng.github.io/software/api/repos/github/LucaJRossi/NIGO"}, {"uid": "github/ekg/freebayes", "html_url": "https://rseng.github.io/software/repository/github/ekg/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/freebayes"}, {"uid": "github/ekg/fastahack", "html_url": "https://rseng.github.io/software/repository/github/ekg/fastahack", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/fastahack"}, {"uid": "github/ekg/smithwaterman", "html_url": "https://rseng.github.io/software/repository/github/ekg/smithwaterman", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/smithwaterman"}, {"uid": "github/ekg/seqwish", "html_url": "https://rseng.github.io/software/repository/github/ekg/seqwish", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/seqwish"}, {"uid": "github/ekg/tabixpp", "html_url": "https://rseng.github.io/software/repository/github/ekg/tabixpp", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/tabixpp"}, {"uid": "github/ireis/PRF", "html_url": "https://rseng.github.io/software/repository/github/ireis/PRF", "api_url": "https://rseng.github.io/software/api/repos/github/ireis/PRF"}, {"uid": "github/hiddenSymmetries/simsopt", "html_url": "https://rseng.github.io/software/repository/github/hiddenSymmetries/simsopt", "api_url": "https://rseng.github.io/software/api/repos/github/hiddenSymmetries/simsopt"}, {"uid": "github/uit-cosmo/blobmodel", "html_url": "https://rseng.github.io/software/repository/github/uit-cosmo/blobmodel", "api_url": "https://rseng.github.io/software/api/repos/github/uit-cosmo/blobmodel"}, {"uid": "github/Clinical-Genomics-Umea/fraggler", "html_url": "https://rseng.github.io/software/repository/github/Clinical-Genomics-Umea/fraggler", "api_url": "https://rseng.github.io/software/api/repos/github/Clinical-Genomics-Umea/fraggler"}, {"uid": "github/zengzhenhuan/GFNet", "html_url": "https://rseng.github.io/software/repository/github/zengzhenhuan/GFNet", "api_url": "https://rseng.github.io/software/api/repos/github/zengzhenhuan/GFNet"}, {"uid": "github/jnktsj/DNApi", "html_url": "https://rseng.github.io/software/repository/github/jnktsj/DNApi", "api_url": "https://rseng.github.io/software/api/repos/github/jnktsj/DNApi"}, {"uid": "github/A-Davies/LensCNN", "html_url": "https://rseng.github.io/software/repository/github/A-Davies/LensCNN", "api_url": "https://rseng.github.io/software/api/repos/github/A-Davies/LensCNN"}, {"uid": "github/RECeSS-EU-Project/stanscofi", "html_url": "https://rseng.github.io/software/repository/github/RECeSS-EU-Project/stanscofi", "api_url": "https://rseng.github.io/software/api/repos/github/RECeSS-EU-Project/stanscofi"}, {"uid": "github/nluetts/NoisySignalIntegration.jl", "html_url": "https://rseng.github.io/software/repository/github/nluetts/NoisySignalIntegration.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nluetts/NoisySignalIntegration.jl"}, {"uid": "github/nmfs-fish-tools/ssmse", "html_url": "https://rseng.github.io/software/repository/github/nmfs-fish-tools/ssmse", "api_url": "https://rseng.github.io/software/api/repos/github/nmfs-fish-tools/ssmse"}, {"uid": "github/ManuelBehrendt/Mera.jl", "html_url": "https://rseng.github.io/software/repository/github/ManuelBehrendt/Mera.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelBehrendt/Mera.jl"}, {"uid": "github/jmejia8/Metaheuristics.jl", "html_url": "https://rseng.github.io/software/repository/github/jmejia8/Metaheuristics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jmejia8/Metaheuristics.jl"}, {"uid": "github/elwinter/nnde", "html_url": "https://rseng.github.io/software/repository/github/elwinter/nnde", "api_url": "https://rseng.github.io/software/api/repos/github/elwinter/nnde"}, {"uid": "github/jhkorhonen/MOODS", "html_url": "https://rseng.github.io/software/repository/github/jhkorhonen/MOODS", "api_url": "https://rseng.github.io/software/api/repos/github/jhkorhonen/MOODS"}, {"uid": "github/Shyentist/fish-r-man", "html_url": "https://rseng.github.io/software/repository/github/Shyentist/fish-r-man", "api_url": "https://rseng.github.io/software/api/repos/github/Shyentist/fish-r-man"}, {"uid": "github/Jacks0nJ/PyFPT", "html_url": "https://rseng.github.io/software/repository/github/Jacks0nJ/PyFPT", "api_url": "https://rseng.github.io/software/api/repos/github/Jacks0nJ/PyFPT"}, {"uid": "github/VincentAlcazer/StatAid", "html_url": "https://rseng.github.io/software/repository/github/VincentAlcazer/StatAid", "api_url": "https://rseng.github.io/software/api/repos/github/VincentAlcazer/StatAid"}, {"uid": "github/matiscke/lcps", "html_url": "https://rseng.github.io/software/repository/github/matiscke/lcps", "api_url": "https://rseng.github.io/software/api/repos/github/matiscke/lcps"}, {"uid": "github/jimmink/argslab", "html_url": "https://rseng.github.io/software/repository/github/jimmink/argslab", "api_url": "https://rseng.github.io/software/api/repos/github/jimmink/argslab"}, {"uid": "github/HadrienG/InSilicoSeq", "html_url": "https://rseng.github.io/software/repository/github/HadrienG/InSilicoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HadrienG/InSilicoSeq"}, {"uid": "github/geopandas/geopandas", "html_url": "https://rseng.github.io/software/repository/github/geopandas/geopandas", "api_url": "https://rseng.github.io/software/api/repos/github/geopandas/geopandas"}, {"uid": "github/henrikdvn/CRSocket", "html_url": "https://rseng.github.io/software/repository/github/henrikdvn/CRSocket", "api_url": "https://rseng.github.io/software/api/repos/github/henrikdvn/CRSocket"}, {"uid": "github/cthoyt/bel-resources", "html_url": "https://rseng.github.io/software/repository/github/cthoyt/bel-resources", "api_url": "https://rseng.github.io/software/api/repos/github/cthoyt/bel-resources"}, {"uid": "github/mbhall88/rasusa", "html_url": "https://rseng.github.io/software/repository/github/mbhall88/rasusa", "api_url": "https://rseng.github.io/software/api/repos/github/mbhall88/rasusa"}, {"uid": "github/jellis18/PTMCMCSampler", "html_url": "https://rseng.github.io/software/repository/github/jellis18/PTMCMCSampler", "api_url": "https://rseng.github.io/software/api/repos/github/jellis18/PTMCMCSampler"}, {"uid": "github/pydata/xarray", "html_url": "https://rseng.github.io/software/repository/github/pydata/xarray", "api_url": "https://rseng.github.io/software/api/repos/github/pydata/xarray"}, {"uid": "github/climate-machine/Oceananigans.jl", "html_url": "https://rseng.github.io/software/repository/github/climate-machine/Oceananigans.jl", "api_url": "https://rseng.github.io/software/api/repos/github/climate-machine/Oceananigans.jl"}, {"uid": "github/kinnala/scikit-fem", "html_url": "https://rseng.github.io/software/repository/github/kinnala/scikit-fem", "api_url": "https://rseng.github.io/software/api/repos/github/kinnala/scikit-fem"}, {"uid": "github/dgbowl/yadg", "html_url": "https://rseng.github.io/software/repository/github/dgbowl/yadg", "api_url": "https://rseng.github.io/software/api/repos/github/dgbowl/yadg"}, {"uid": "github/lzkelley/kalepy", "html_url": "https://rseng.github.io/software/repository/github/lzkelley/kalepy", "api_url": "https://rseng.github.io/software/api/repos/github/lzkelley/kalepy"}, {"uid": "github/LebeerLab/tidytacos", "html_url": "https://rseng.github.io/software/repository/github/LebeerLab/tidytacos", "api_url": "https://rseng.github.io/software/api/repos/github/LebeerLab/tidytacos"}, {"uid": "github/su2code/SU2", "html_url": "https://rseng.github.io/software/repository/github/su2code/SU2", "api_url": "https://rseng.github.io/software/api/repos/github/su2code/SU2"}, {"uid": "github/elnjensen/Tapir", "html_url": "https://rseng.github.io/software/repository/github/elnjensen/Tapir", "api_url": "https://rseng.github.io/software/api/repos/github/elnjensen/Tapir"}, {"uid": "github/martinjameswhite/directsht", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/directsht", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/directsht"}, {"uid": "github/martinjameswhite/ZeldovichRecon", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/ZeldovichRecon", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/ZeldovichRecon"}, {"uid": "github/herrsalmi/FConverter", "html_url": "https://rseng.github.io/software/repository/github/herrsalmi/FConverter", "api_url": "https://rseng.github.io/software/api/repos/github/herrsalmi/FConverter"}, {"uid": "github/josegit88/SCORPIO", "html_url": "https://rseng.github.io/software/repository/github/josegit88/SCORPIO", "api_url": "https://rseng.github.io/software/api/repos/github/josegit88/SCORPIO"}, {"uid": "github/astrosmili/smili", "html_url": "https://rseng.github.io/software/repository/github/astrosmili/smili", "api_url": "https://rseng.github.io/software/api/repos/github/astrosmili/smili"}, {"uid": "github/OSUDSL/pydre", "html_url": "https://rseng.github.io/software/repository/github/OSUDSL/pydre", "api_url": "https://rseng.github.io/software/api/repos/github/OSUDSL/pydre"}, {"uid": "github/Santiso-Group/despasito", "html_url": "https://rseng.github.io/software/repository/github/Santiso-Group/despasito", "api_url": "https://rseng.github.io/software/api/repos/github/Santiso-Group/despasito"}, {"uid": "github/VSPEC-collab/VSPEC", "html_url": "https://rseng.github.io/software/repository/github/VSPEC-collab/VSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/VSPEC-collab/VSPEC"}, {"uid": "github/sarrvesh/cuFFS", "html_url": "https://rseng.github.io/software/repository/github/sarrvesh/cuFFS", "api_url": "https://rseng.github.io/software/api/repos/github/sarrvesh/cuFFS"}, {"uid": "github/cgrudz/DataAssimilationBenchmarks.jl", "html_url": "https://rseng.github.io/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/cgrudz/DataAssimilationBenchmarks.jl"}, {"uid": "github/NathanSkene/MAGMA_Celltyping", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/MAGMA_Celltyping", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/MAGMA_Celltyping"}, {"uid": "github/NathanSkene/EWCE", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/EWCE", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/EWCE"}, {"uid": "github/ycwu1030/EvoEMD", "html_url": "https://rseng.github.io/software/repository/github/ycwu1030/EvoEMD", "api_url": "https://rseng.github.io/software/api/repos/github/ycwu1030/EvoEMD"}, {"uid": "github/LeonSong1995/gsMap", "html_url": "https://rseng.github.io/software/repository/github/LeonSong1995/gsMap", "api_url": "https://rseng.github.io/software/api/repos/github/LeonSong1995/gsMap"}, {"uid": "github/nlesc-ave/ave-rest-service", "html_url": "https://rseng.github.io/software/repository/github/nlesc-ave/ave-rest-service", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-ave/ave-rest-service"}, {"uid": "github/katholt/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kleborate"}, {"uid": "github/katholt/Kaptive", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kaptive", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kaptive"}, {"uid": "github/katholt/srst2", "html_url": "https://rseng.github.io/software/repository/github/katholt/srst2", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/srst2"}, {"uid": "github/morrowcj/remotePARTS", "html_url": "https://rseng.github.io/software/repository/github/morrowcj/remotePARTS", "api_url": "https://rseng.github.io/software/api/repos/github/morrowcj/remotePARTS"}, {"uid": "github/snijderlab/stitch", "html_url": "https://rseng.github.io/software/repository/github/snijderlab/stitch", "api_url": "https://rseng.github.io/software/api/repos/github/snijderlab/stitch"}, {"uid": "github/t00shadow/CryoDataBot", "html_url": "https://rseng.github.io/software/repository/github/t00shadow/CryoDataBot", "api_url": "https://rseng.github.io/software/api/repos/github/t00shadow/CryoDataBot"}, {"uid": "github/rkiman/wdwarfdate", "html_url": "https://rseng.github.io/software/repository/github/rkiman/wdwarfdate", "api_url": "https://rseng.github.io/software/api/repos/github/rkiman/wdwarfdate"}, {"uid": "github/igmhub/ForestFlow", "html_url": "https://rseng.github.io/software/repository/github/igmhub/ForestFlow", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/ForestFlow"}, {"uid": "github/igmhub/LyaCoLoRe", "html_url": "https://rseng.github.io/software/repository/github/igmhub/LyaCoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/LyaCoLoRe"}, {"uid": "github/igmhub/baofit", "html_url": "https://rseng.github.io/software/repository/github/igmhub/baofit", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/baofit"}, {"uid": "github/igmhub/picca", "html_url": "https://rseng.github.io/software/repository/github/igmhub/picca", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/picca"}, {"uid": "github/geodynamics/burnman", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/burnman", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/burnman"}, {"uid": "github/geodynamics/Rayleigh", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/Rayleigh", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/Rayleigh"}, {"uid": "github/FINNGEN/lavaa-react", "html_url": "https://rseng.github.io/software/repository/github/FINNGEN/lavaa-react", "api_url": "https://rseng.github.io/software/api/repos/github/FINNGEN/lavaa-react"}, {"uid": "github/cmelab/flowerMD", "html_url": "https://rseng.github.io/software/repository/github/cmelab/flowerMD", "api_url": "https://rseng.github.io/software/api/repos/github/cmelab/flowerMD"}, {"uid": "github/deeptools/deepTools", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deepTools", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deepTools"}, {"uid": "github/deeptools/deeptools_intervals", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deeptools_intervals", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deeptools_intervals"}, {"uid": "github/deeptools/HiCExplorer", "html_url": "https://rseng.github.io/software/repository/github/deeptools/HiCExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/HiCExplorer"}, {"uid": "github/deeptools/py2bit", "html_url": "https://rseng.github.io/software/repository/github/deeptools/py2bit", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/py2bit"}, {"uid": "github/ElucidataInc/ElMaven", "html_url": "https://rseng.github.io/software/repository/github/ElucidataInc/ElMaven", "api_url": "https://rseng.github.io/software/api/repos/github/ElucidataInc/ElMaven"}, {"uid": "github/captain-exoplanet/misttborn", "html_url": "https://rseng.github.io/software/repository/github/captain-exoplanet/misttborn", "api_url": "https://rseng.github.io/software/api/repos/github/captain-exoplanet/misttborn"}, {"uid": "github/LucIJspeert/star_shadow", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/star_shadow", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/star_shadow"}, {"uid": "github/LucIJspeert/eclipsr", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/eclipsr", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/eclipsr"}, {"uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", "html_url": "https://rseng.github.io/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", "api_url": "https://rseng.github.io/software/api/repos/github/mengyao/Complete-Striped-Smith-Waterman-Library"}, {"uid": "github/EnergyModelsX/EnergyModelsBase.jl", "html_url": "https://rseng.github.io/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EnergyModelsX/EnergyModelsBase.jl"}, {"uid": "github/mastodon-sc/mastodon-deep-lineage", "html_url": "https://rseng.github.io/software/repository/github/mastodon-sc/mastodon-deep-lineage", "api_url": "https://rseng.github.io/software/api/repos/github/mastodon-sc/mastodon-deep-lineage"}, {"uid": "github/asalda/FiCUS", "html_url": "https://rseng.github.io/software/repository/github/asalda/FiCUS", "api_url": "https://rseng.github.io/software/api/repos/github/asalda/FiCUS"}, {"uid": "github/he2016012996/CABnet", "html_url": "https://rseng.github.io/software/repository/github/he2016012996/CABnet", "api_url": "https://rseng.github.io/software/api/repos/github/he2016012996/CABnet"}, {"uid": "github/gromacs/gromacs", "html_url": "https://rseng.github.io/software/repository/github/gromacs/gromacs", "api_url": "https://rseng.github.io/software/api/repos/github/gromacs/gromacs"}, {"uid": "github/philres/catfishq", "html_url": "https://rseng.github.io/software/repository/github/philres/catfishq", "api_url": "https://rseng.github.io/software/api/repos/github/philres/catfishq"}, {"uid": "github/philres/ngmlr", "html_url": "https://rseng.github.io/software/repository/github/philres/ngmlr", "api_url": "https://rseng.github.io/software/api/repos/github/philres/ngmlr"}, {"uid": "github/reedacartwright/ngila", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/ngila", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/ngila"}, {"uid": "github/reedacartwright/dawg", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/dawg", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/dawg"}, {"uid": "github/marccanby/linguiphyr", "html_url": "https://rseng.github.io/software/repository/github/marccanby/linguiphyr", "api_url": "https://rseng.github.io/software/api/repos/github/marccanby/linguiphyr"}, {"uid": "github/lgrcia/nuance", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/nuance", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/nuance"}, {"uid": "github/lgrcia/prose", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/prose", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/prose"}, {"uid": "github/gururajw/superlite", "html_url": "https://rseng.github.io/software/repository/github/gururajw/superlite", "api_url": "https://rseng.github.io/software/api/repos/github/gururajw/superlite"}, {"uid": "github/ExoArcturus/TriArc", "html_url": "https://rseng.github.io/software/repository/github/ExoArcturus/TriArc", "api_url": "https://rseng.github.io/software/api/repos/github/ExoArcturus/TriArc"}, {"uid": "github/DarkQuestCosmology/dark_emulator_public", "html_url": "https://rseng.github.io/software/repository/github/DarkQuestCosmology/dark_emulator_public", "api_url": "https://rseng.github.io/software/api/repos/github/DarkQuestCosmology/dark_emulator_public"}, {"uid": "github/synthpop-galaxy/synthpop", "html_url": "https://rseng.github.io/software/repository/github/synthpop-galaxy/synthpop", "api_url": "https://rseng.github.io/software/api/repos/github/synthpop-galaxy/synthpop"}, {"uid": "github/eead-csic-compbio/get_homologues", "html_url": "https://rseng.github.io/software/repository/github/eead-csic-compbio/get_homologues", "api_url": "https://rseng.github.io/software/api/repos/github/eead-csic-compbio/get_homologues"}, {"uid": "github/Bgi-LUSH/GPMeta", "html_url": "https://rseng.github.io/software/repository/github/Bgi-LUSH/GPMeta", "api_url": "https://rseng.github.io/software/api/repos/github/Bgi-LUSH/GPMeta"}, {"uid": "github/FergusDonnan/PyROA", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PyROA", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PyROA"}, {"uid": "github/FergusDonnan/Running-Optimal-Average", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/Running-Optimal-Average", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/Running-Optimal-Average"}, {"uid": "github/FergusDonnan/PAHDecomp", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PAHDecomp", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PAHDecomp"}, {"uid": "github/mithun218/GiNaCDE", "html_url": "https://rseng.github.io/software/repository/github/mithun218/GiNaCDE", "api_url": "https://rseng.github.io/software/api/repos/github/mithun218/GiNaCDE"}, {"uid": "github/eblur/dust", "html_url": "https://rseng.github.io/software/repository/github/eblur/dust", "api_url": "https://rseng.github.io/software/api/repos/github/eblur/dust"}, {"uid": "github/djbard/ccogs", "html_url": "https://rseng.github.io/software/repository/github/djbard/ccogs", "api_url": "https://rseng.github.io/software/api/repos/github/djbard/ccogs"}, {"uid": "github/Siegel-Lab/BioSmoother", "html_url": "https://rseng.github.io/software/repository/github/Siegel-Lab/BioSmoother", "api_url": "https://rseng.github.io/software/api/repos/github/Siegel-Lab/BioSmoother"}, {"uid": "github/ctian282/DeepSSM", "html_url": "https://rseng.github.io/software/repository/github/ctian282/DeepSSM", "api_url": "https://rseng.github.io/software/api/repos/github/ctian282/DeepSSM"}, {"uid": "github/Shamir-Lab/domino_web", "html_url": "https://rseng.github.io/software/repository/github/Shamir-Lab/domino_web", "api_url": "https://rseng.github.io/software/api/repos/github/Shamir-Lab/domino_web"}, {"uid": "github/UAMCAntwerpen/LEADD", "html_url": "https://rseng.github.io/software/repository/github/UAMCAntwerpen/LEADD", "api_url": "https://rseng.github.io/software/api/repos/github/UAMCAntwerpen/LEADD"}, {"uid": "github/grahambell/pymoc", "html_url": "https://rseng.github.io/software/repository/github/grahambell/pymoc", "api_url": "https://rseng.github.io/software/api/repos/github/grahambell/pymoc"}, {"uid": "github/TriPed-Robot/TriP", "html_url": "https://rseng.github.io/software/repository/github/TriPed-Robot/TriP", "api_url": "https://rseng.github.io/software/api/repos/github/TriPed-Robot/TriP"}, {"uid": "github/bihealth/sodar_core", "html_url": "https://rseng.github.io/software/repository/github/bihealth/sodar_core", "api_url": "https://rseng.github.io/software/api/repos/github/bihealth/sodar_core"}, {"uid": "github/simonsobs/mnms", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/mnms", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/mnms"}, {"uid": "github/simonsobs/so_noise_models", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/so_noise_models", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/so_noise_models"}, {"uid": "github/simonsobs/pixell", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/pixell", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/pixell"}, {"uid": "github/simonsobs/hmvec", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/hmvec", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/hmvec"}, {"uid": "github/simonsobs/nemo", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/nemo"}, {"uid": "github/Valdes-Tresanco-MS/NbThermo", "html_url": "https://rseng.github.io/software/repository/github/Valdes-Tresanco-MS/NbThermo", "api_url": "https://rseng.github.io/software/api/repos/github/Valdes-Tresanco-MS/NbThermo"}, {"uid": "github/collinlewin/STELA-Toolkit", "html_url": "https://rseng.github.io/software/repository/github/collinlewin/STELA-Toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/collinlewin/STELA-Toolkit"}, {"uid": "github/horvatovichlab/MSIWarp", "html_url": "https://rseng.github.io/software/repository/github/horvatovichlab/MSIWarp", "api_url": "https://rseng.github.io/software/api/repos/github/horvatovichlab/MSIWarp"}, {"uid": "github/AMReX-Astro/wdmerger", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/wdmerger", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/wdmerger"}, {"uid": "github/AMReX-Astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Castro"}, {"uid": "github/AMReX-Astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Nyx"}, {"uid": "github/AMReX-Astro/MAESTROeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/MAESTROeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/MAESTROeX"}, {"uid": "github/BackofenLab/StoatyDive", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/StoatyDive", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/StoatyDive"}, {"uid": "github/BackofenLab/IntaRNA", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/IntaRNA", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/IntaRNA"}, {"uid": "github/BackofenLab/Peakhood", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/Peakhood", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/Peakhood"}, {"uid": "github/nlesc/scriptcwl", "html_url": "https://rseng.github.io/software/repository/github/nlesc/scriptcwl", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/scriptcwl"}, {"uid": "github/nlesc/embodied-emotions-scripts", "html_url": "https://rseng.github.io/software/repository/github/nlesc/embodied-emotions-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/embodied-emotions-scripts"}, {"uid": "github/julie-forman-kay-lab/SPyCi-PDB", "html_url": "https://rseng.github.io/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", "api_url": "https://rseng.github.io/software/api/repos/github/julie-forman-kay-lab/SPyCi-PDB"}, {"uid": "github/Lbalkenhol/candl", "html_url": "https://rseng.github.io/software/repository/github/Lbalkenhol/candl", "api_url": "https://rseng.github.io/software/api/repos/github/Lbalkenhol/candl"}, {"uid": "github/combustiontoolbox/combustion_toolbox", "html_url": "https://rseng.github.io/software/repository/github/combustiontoolbox/combustion_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/combustiontoolbox/combustion_toolbox"}, {"uid": "github/Trovemaster/exocross", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/exocross", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/exocross"}, {"uid": "github/Trovemaster/Duo", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/Duo", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/Duo"}, {"uid": "github/Trovemaster/TROVE", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/TROVE", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/TROVE"}, {"uid": "github/spm/spm", "html_url": "https://rseng.github.io/software/repository/github/spm/spm", "api_url": "https://rseng.github.io/software/api/repos/github/spm/spm"}, {"uid": "github/UCD4IDS/WaveletsExt.jl", "html_url": "https://rseng.github.io/software/repository/github/UCD4IDS/WaveletsExt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UCD4IDS/WaveletsExt.jl"}, {"uid": "github/mzkhalid039/DWBuilder", "html_url": "https://rseng.github.io/software/repository/github/mzkhalid039/DWBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/mzkhalid039/DWBuilder"}, {"uid": "github/fmichel/MaDKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/MaDKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/MaDKit"}, {"uid": "github/fmichel/TurtleKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/TurtleKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/TurtleKit"}, {"uid": "github/biswajitmb/DarpanX", "html_url": "https://rseng.github.io/software/repository/github/biswajitmb/DarpanX", "api_url": "https://rseng.github.io/software/api/repos/github/biswajitmb/DarpanX"}, {"uid": "github/JLBLine/WODEN", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/WODEN", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/WODEN"}, {"uid": "github/JLBLine/PUMA", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/PUMA", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/PUMA"}, {"uid": "github/bertrandplez/Turbospectrum_NLTE", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum_NLTE", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum_NLTE"}, {"uid": "github/bertrandplez/Turbospectrum2019", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum2019", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum2019"}, {"uid": "github/GoelandProver/Goeland", "html_url": "https://rseng.github.io/software/repository/github/GoelandProver/Goeland", "api_url": "https://rseng.github.io/software/api/repos/github/GoelandProver/Goeland"}, {"uid": "github/enthusi/feline", "html_url": "https://rseng.github.io/software/repository/github/enthusi/feline", "api_url": "https://rseng.github.io/software/api/repos/github/enthusi/feline"}, {"uid": "github/ADAH-EviDENce/evidence", "html_url": "https://rseng.github.io/software/repository/github/ADAH-EviDENce/evidence", "api_url": "https://rseng.github.io/software/api/repos/github/ADAH-EviDENce/evidence"}, {"uid": "github/orbisgis/lczexplore", "html_url": "https://rseng.github.io/software/repository/github/orbisgis/lczexplore", "api_url": "https://rseng.github.io/software/api/repos/github/orbisgis/lczexplore"}, {"uid": "github/MrMinimal64/multivar_horner", "html_url": "https://rseng.github.io/software/repository/github/MrMinimal64/multivar_horner", "api_url": "https://rseng.github.io/software/api/repos/github/MrMinimal64/multivar_horner"}, {"uid": "github/pedro-acunha/SHEEP", "html_url": "https://rseng.github.io/software/repository/github/pedro-acunha/SHEEP", "api_url": "https://rseng.github.io/software/api/repos/github/pedro-acunha/SHEEP"}, {"uid": "github/SuLab/Wikidata-phenomizer", "html_url": "https://rseng.github.io/software/repository/github/SuLab/Wikidata-phenomizer", "api_url": "https://rseng.github.io/software/api/repos/github/SuLab/Wikidata-phenomizer"}, {"uid": "github/j-faria/kima", "html_url": "https://rseng.github.io/software/repository/github/j-faria/kima", "api_url": "https://rseng.github.io/software/api/repos/github/j-faria/kima"}, {"uid": "github/cl3425/Clairvoyance", "html_url": "https://rseng.github.io/software/repository/github/cl3425/Clairvoyance", "api_url": "https://rseng.github.io/software/api/repos/github/cl3425/Clairvoyance"}, {"uid": "github/erhard-lab/gedi", "html_url": "https://rseng.github.io/software/repository/github/erhard-lab/gedi", "api_url": "https://rseng.github.io/software/api/repos/github/erhard-lab/gedi"}, {"uid": "github/EdwardBerman/shopt", "html_url": "https://rseng.github.io/software/repository/github/EdwardBerman/shopt", "api_url": "https://rseng.github.io/software/api/repos/github/EdwardBerman/shopt"}, {"uid": "github/KenethGarcia/ClassiPyGRB", "html_url": "https://rseng.github.io/software/repository/github/KenethGarcia/ClassiPyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/KenethGarcia/ClassiPyGRB"}, {"uid": "github/keurfonluu/toughio", "html_url": "https://rseng.github.io/software/repository/github/keurfonluu/toughio", "api_url": "https://rseng.github.io/software/api/repos/github/keurfonluu/toughio"}, {"uid": "github/FabrizioMusacchio/MotilA", "html_url": "https://rseng.github.io/software/repository/github/FabrizioMusacchio/MotilA", "api_url": "https://rseng.github.io/software/api/repos/github/FabrizioMusacchio/MotilA"}, {"uid": "github/ClaraLage/Portfolio-Transition", "html_url": "https://rseng.github.io/software/repository/github/ClaraLage/Portfolio-Transition", "api_url": "https://rseng.github.io/software/api/repos/github/ClaraLage/Portfolio-Transition"}, {"uid": "github/INRS-France/predicting_alarm_audibility", "html_url": "https://rseng.github.io/software/repository/github/INRS-France/predicting_alarm_audibility", "api_url": "https://rseng.github.io/software/api/repos/github/INRS-France/predicting_alarm_audibility"}, {"uid": "github/dpseidel/stmove", "html_url": "https://rseng.github.io/software/repository/github/dpseidel/stmove", "api_url": "https://rseng.github.io/software/api/repos/github/dpseidel/stmove"}, {"uid": "github/tiberioap/grav_waldo", "html_url": "https://rseng.github.io/software/repository/github/tiberioap/grav_waldo", "api_url": "https://rseng.github.io/software/api/repos/github/tiberioap/grav_waldo"}, {"uid": "github/pierrehoudayer/RUBIS", "html_url": "https://rseng.github.io/software/repository/github/pierrehoudayer/RUBIS", "api_url": "https://rseng.github.io/software/api/repos/github/pierrehoudayer/RUBIS"}, {"uid": "github/DirectDM/directdm-py", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-py", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-py"}, {"uid": "github/DirectDM/directdm-mma", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-mma", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-mma"}, {"uid": "github/huchiayu/ParticleGridMapper.jl", "html_url": "https://rseng.github.io/software/repository/github/huchiayu/ParticleGridMapper.jl", "api_url": "https://rseng.github.io/software/api/repos/github/huchiayu/ParticleGridMapper.jl"}, {"uid": "github/wdpozzo/raynest", "html_url": "https://rseng.github.io/software/repository/github/wdpozzo/raynest", "api_url": "https://rseng.github.io/software/api/repos/github/wdpozzo/raynest"}, {"uid": "github/scikit-image/scikit-image", "html_url": "https://rseng.github.io/software/repository/github/scikit-image/scikit-image", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-image/scikit-image"}, {"uid": "github/plotly/dash", "html_url": "https://rseng.github.io/software/repository/github/plotly/dash", "api_url": "https://rseng.github.io/software/api/repos/github/plotly/dash"}, {"uid": "github/simd-everywhere/simde", "html_url": "https://rseng.github.io/software/repository/github/simd-everywhere/simde", "api_url": "https://rseng.github.io/software/api/repos/github/simd-everywhere/simde"}, {"uid": "github/EISy-as-Py/hardy", "html_url": "https://rseng.github.io/software/repository/github/EISy-as-Py/hardy", "api_url": "https://rseng.github.io/software/api/repos/github/EISy-as-Py/hardy"}, {"uid": "github/dsoave/JLS", "html_url": "https://rseng.github.io/software/repository/github/dsoave/JLS", "api_url": "https://rseng.github.io/software/api/repos/github/dsoave/JLS"}, {"uid": "github/microbioinformatic/Co-PATHOgenex", "html_url": "https://rseng.github.io/software/repository/github/microbioinformatic/Co-PATHOgenex", "api_url": "https://rseng.github.io/software/api/repos/github/microbioinformatic/Co-PATHOgenex"}, {"uid": "github/jboynyc/textnets", "html_url": "https://rseng.github.io/software/repository/github/jboynyc/textnets", "api_url": "https://rseng.github.io/software/api/repos/github/jboynyc/textnets"}, {"uid": "github/bokunoBike/m6AGE", "html_url": "https://rseng.github.io/software/repository/github/bokunoBike/m6AGE", "api_url": "https://rseng.github.io/software/api/repos/github/bokunoBike/m6AGE"}, {"uid": "github/lomereiter/sambamba", "html_url": "https://rseng.github.io/software/repository/github/lomereiter/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/lomereiter/sambamba"}, {"uid": "github/mpi4jax/mpi4jax", "html_url": "https://rseng.github.io/software/repository/github/mpi4jax/mpi4jax", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4jax/mpi4jax"}, {"uid": "github/lu-yizhou/ClusterSeg", "html_url": "https://rseng.github.io/software/repository/github/lu-yizhou/ClusterSeg", "api_url": "https://rseng.github.io/software/api/repos/github/lu-yizhou/ClusterSeg"}, {"uid": "github/cc646201081/CircSI-SSL", "html_url": "https://rseng.github.io/software/repository/github/cc646201081/CircSI-SSL", "api_url": "https://rseng.github.io/software/api/repos/github/cc646201081/CircSI-SSL"}, {"uid": "github/davidgardenier/frbpoppy", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbpoppy", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbpoppy"}, {"uid": "github/davidgardenier/frbcat", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbcat", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbcat"}, {"uid": "github/locasto/libdisorder", "html_url": "https://rseng.github.io/software/repository/github/locasto/libdisorder", "api_url": "https://rseng.github.io/software/api/repos/github/locasto/libdisorder"}, {"uid": "github/dwkim78/upsilon", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/upsilon", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/upsilon"}, {"uid": "github/dwkim78/pdtrend", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/pdtrend", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/pdtrend"}, {"uid": "github/dwkim78/ASTRiDE", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/ASTRiDE", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/ASTRiDE"}, {"uid": "github/AnkitBarik/planetMagFields", "html_url": "https://rseng.github.io/software/repository/github/AnkitBarik/planetMagFields", "api_url": "https://rseng.github.io/software/api/repos/github/AnkitBarik/planetMagFields"}, {"uid": "github/JuliaOpt/JuMP.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOpt/JuMP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOpt/JuMP.jl"}, {"uid": "github/steineggerlab/foldmason", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldmason", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldmason"}, {"uid": "github/steineggerlab/foldseek", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldseek", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldseek"}, {"uid": "github/steineggerlab/Metabuli", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/Metabuli", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/Metabuli"}, {"uid": "github/ydLiu-HIT/deSALT", "html_url": "https://rseng.github.io/software/repository/github/ydLiu-HIT/deSALT", "api_url": "https://rseng.github.io/software/api/repos/github/ydLiu-HIT/deSALT"}, {"uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "html_url": "https://rseng.github.io/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "api_url": "https://rseng.github.io/software/api/repos/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework"}, {"uid": "github/conda-forge/conda-smithy", "html_url": "https://rseng.github.io/software/repository/github/conda-forge/conda-smithy", "api_url": "https://rseng.github.io/software/api/repos/github/conda-forge/conda-smithy"}, {"uid": "github/benopp99/DPMhalo", "html_url": "https://rseng.github.io/software/repository/github/benopp99/DPMhalo", "api_url": "https://rseng.github.io/software/api/repos/github/benopp99/DPMhalo"}, {"uid": "github/pvlib/pvlib-python", "html_url": "https://rseng.github.io/software/repository/github/pvlib/pvlib-python", "api_url": "https://rseng.github.io/software/api/repos/github/pvlib/pvlib-python"}, {"uid": "github/JFFleming/RCFV_Reader", "html_url": "https://rseng.github.io/software/repository/github/JFFleming/RCFV_Reader", "api_url": "https://rseng.github.io/software/api/repos/github/JFFleming/RCFV_Reader"}, {"uid": "github/TearsWaiting/MIMML", "html_url": "https://rseng.github.io/software/repository/github/TearsWaiting/MIMML", "api_url": "https://rseng.github.io/software/api/repos/github/TearsWaiting/MIMML"}, {"uid": "github/JASHunt/Snapdragons", "html_url": "https://rseng.github.io/software/repository/github/JASHunt/Snapdragons", "api_url": "https://rseng.github.io/software/api/repos/github/JASHunt/Snapdragons"}, {"uid": "github/archaeo-pteryx/PowerSpecCovFFT", "html_url": "https://rseng.github.io/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", "api_url": "https://rseng.github.io/software/api/repos/github/archaeo-pteryx/PowerSpecCovFFT"}, {"uid": "github/aewallin/allantools", "html_url": "https://rseng.github.io/software/repository/github/aewallin/allantools", "api_url": "https://rseng.github.io/software/api/repos/github/aewallin/allantools"}, {"uid": "github/jacobmerson/model-traits", "html_url": "https://rseng.github.io/software/repository/github/jacobmerson/model-traits", "api_url": "https://rseng.github.io/software/api/repos/github/jacobmerson/model-traits"}, {"uid": "github/Ashod/garli", "html_url": "https://rseng.github.io/software/repository/github/Ashod/garli", "api_url": "https://rseng.github.io/software/api/repos/github/Ashod/garli"}, {"uid": "github/wtraylor/modular_megafauna_model", "html_url": "https://rseng.github.io/software/repository/github/wtraylor/modular_megafauna_model", "api_url": "https://rseng.github.io/software/api/repos/github/wtraylor/modular_megafauna_model"}, {"uid": "github/EnsembleGovServices/kamodo-core", "html_url": "https://rseng.github.io/software/repository/github/EnsembleGovServices/kamodo-core", "api_url": "https://rseng.github.io/software/api/repos/github/EnsembleGovServices/kamodo-core"}, {"uid": "github/3top1a/biotools-linter", "html_url": "https://rseng.github.io/software/repository/github/3top1a/biotools-linter", "api_url": "https://rseng.github.io/software/api/repos/github/3top1a/biotools-linter"}, {"uid": "github/VasilyKokorev/stardust", "html_url": "https://rseng.github.io/software/repository/github/VasilyKokorev/stardust", "api_url": "https://rseng.github.io/software/api/repos/github/VasilyKokorev/stardust"}, {"uid": "github/RomainFeron/mwga-utils", "html_url": "https://rseng.github.io/software/repository/github/RomainFeron/mwga-utils", "api_url": "https://rseng.github.io/software/api/repos/github/RomainFeron/mwga-utils"}, {"uid": "github/karpov-sv/stdweb", "html_url": "https://rseng.github.io/software/repository/github/karpov-sv/stdweb", "api_url": "https://rseng.github.io/software/api/repos/github/karpov-sv/stdweb"}, {"uid": "github/edbiomedai/scmorph", "html_url": "https://rseng.github.io/software/repository/github/edbiomedai/scmorph", "api_url": "https://rseng.github.io/software/api/repos/github/edbiomedai/scmorph"}, {"uid": "github/riogroup/SORA", "html_url": "https://rseng.github.io/software/repository/github/riogroup/SORA", "api_url": "https://rseng.github.io/software/api/repos/github/riogroup/SORA"}, {"uid": "github/NBISweden/AGAT", "html_url": "https://rseng.github.io/software/repository/github/NBISweden/AGAT", "api_url": "https://rseng.github.io/software/api/repos/github/NBISweden/AGAT"}, {"uid": "github/ICSC-Spoke3/NP_TMcode", "html_url": "https://rseng.github.io/software/repository/github/ICSC-Spoke3/NP_TMcode", "api_url": "https://rseng.github.io/software/api/repos/github/ICSC-Spoke3/NP_TMcode"}, {"uid": "github/matthias-mayr/Cartesian-Impedance-Controller", "html_url": "https://rseng.github.io/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", "api_url": "https://rseng.github.io/software/api/repos/github/matthias-mayr/Cartesian-Impedance-Controller"}, {"uid": "github/GOBLIN-Proj/goblin_lite", "html_url": "https://rseng.github.io/software/repository/github/GOBLIN-Proj/goblin_lite", "api_url": "https://rseng.github.io/software/api/repos/github/GOBLIN-Proj/goblin_lite"}, {"uid": "github/lionandjelka/QhX1", "html_url": "https://rseng.github.io/software/repository/github/lionandjelka/QhX1", "api_url": "https://rseng.github.io/software/api/repos/github/lionandjelka/QhX1"}, {"uid": "github/tnakazato/priism", "html_url": "https://rseng.github.io/software/repository/github/tnakazato/priism", "api_url": "https://rseng.github.io/software/api/repos/github/tnakazato/priism"}, {"uid": "github/bowang-lab/scGPT", "html_url": "https://rseng.github.io/software/repository/github/bowang-lab/scGPT", "api_url": "https://rseng.github.io/software/api/repos/github/bowang-lab/scGPT"}, {"uid": "github/c-martinez/BeyondTheBook", "html_url": "https://rseng.github.io/software/repository/github/c-martinez/BeyondTheBook", "api_url": "https://rseng.github.io/software/api/repos/github/c-martinez/BeyondTheBook"}, {"uid": "github/ElsevierSoftwareX/SOFTX_2020_119", "html_url": "https://rseng.github.io/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", "api_url": "https://rseng.github.io/software/api/repos/github/ElsevierSoftwareX/SOFTX_2020_119"}, {"uid": "github/morisUtokyo/uTR", "html_url": "https://rseng.github.io/software/repository/github/morisUtokyo/uTR", "api_url": "https://rseng.github.io/software/api/repos/github/morisUtokyo/uTR"}, {"uid": "github/Mik3M4n/BaCoN", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/BaCoN", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/BaCoN"}, {"uid": "github/Mik3M4n/EF-TIGRE", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/EF-TIGRE", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/EF-TIGRE"}, {"uid": "github/tony-travis/PIQUE", "html_url": "https://rseng.github.io/software/repository/github/tony-travis/PIQUE", "api_url": "https://rseng.github.io/software/api/repos/github/tony-travis/PIQUE"}, {"uid": "github/dmitryduev/penquins", "html_url": "https://rseng.github.io/software/repository/github/dmitryduev/penquins", "api_url": "https://rseng.github.io/software/api/repos/github/dmitryduev/penquins"}, {"uid": "github/TeamCOMPAS/COMPAS", "html_url": "https://rseng.github.io/software/repository/github/TeamCOMPAS/COMPAS", "api_url": "https://rseng.github.io/software/api/repos/github/TeamCOMPAS/COMPAS"}, {"uid": "github/GeoffDuniam/FITS-Code-Examples", "html_url": "https://rseng.github.io/software/repository/github/GeoffDuniam/FITS-Code-Examples", "api_url": "https://rseng.github.io/software/api/repos/github/GeoffDuniam/FITS-Code-Examples"}, {"uid": "github/jpahlers/LASR", "html_url": "https://rseng.github.io/software/repository/github/jpahlers/LASR", "api_url": "https://rseng.github.io/software/api/repos/github/jpahlers/LASR"}, {"uid": "github/broadinstitute/wot", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/wot", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/wot"}, {"uid": "github/broadinstitute/tensorqtl", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/tensorqtl", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/tensorqtl"}, {"uid": "github/broadinstitute/picard", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/picard", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/picard"}, {"uid": "github/broadinstitute/Drop-seq", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/Drop-seq", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/Drop-seq"}, {"uid": "github/broadinstitute/CellBender", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/CellBender", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/CellBender"}, {"uid": "github/broadinstitute/gatk", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/gatk", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/gatk"}, {"uid": "github/broadinstitute/cromwell", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/cromwell", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/cromwell"}, {"uid": "github/pandas-dev/pandas", "html_url": "https://rseng.github.io/software/repository/github/pandas-dev/pandas", "api_url": "https://rseng.github.io/software/api/repos/github/pandas-dev/pandas"}, {"uid": "github/nf-core/mag", "html_url": "https://rseng.github.io/software/repository/github/nf-core/mag", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/mag"}, {"uid": "github/nf-core/proteinfamilies", "html_url": "https://rseng.github.io/software/repository/github/nf-core/proteinfamilies", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/proteinfamilies"}, {"uid": "github/nf-core/viralrecon", "html_url": "https://rseng.github.io/software/repository/github/nf-core/viralrecon", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/viralrecon"}, {"uid": "github/nf-core/airrflow", "html_url": "https://rseng.github.io/software/repository/github/nf-core/airrflow", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/airrflow"}, {"uid": "github/nf-core/sarek", "html_url": "https://rseng.github.io/software/repository/github/nf-core/sarek", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/sarek"}, {"uid": "github/lkmklsmn/DrivAER", "html_url": "https://rseng.github.io/software/repository/github/lkmklsmn/DrivAER", "api_url": "https://rseng.github.io/software/api/repos/github/lkmklsmn/DrivAER"}, {"uid": "github/RafiKueng/SpaghettiLens", "html_url": "https://rseng.github.io/software/repository/github/RafiKueng/SpaghettiLens", "api_url": "https://rseng.github.io/software/api/repos/github/RafiKueng/SpaghettiLens"}, {"uid": "github/nvnsudharsan/SOLWEIG-GPU", "html_url": "https://rseng.github.io/software/repository/github/nvnsudharsan/SOLWEIG-GPU", "api_url": "https://rseng.github.io/software/api/repos/github/nvnsudharsan/SOLWEIG-GPU"}, {"uid": "github/dsheward-astro/pynaple", "html_url": "https://rseng.github.io/software/repository/github/dsheward-astro/pynaple", "api_url": "https://rseng.github.io/software/api/repos/github/dsheward-astro/pynaple"}, {"uid": "github/cnsetzer/kilopop", "html_url": "https://rseng.github.io/software/repository/github/cnsetzer/kilopop", "api_url": "https://rseng.github.io/software/api/repos/github/cnsetzer/kilopop"}, {"uid": "github/EddyRivasLab/infernal", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/infernal", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/infernal"}, {"uid": "github/EddyRivasLab/hmmer", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/hmmer", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/hmmer"}, {"uid": "github/4dn-dcic/pairix", "html_url": "https://rseng.github.io/software/repository/github/4dn-dcic/pairix", "api_url": "https://rseng.github.io/software/api/repos/github/4dn-dcic/pairix"}, {"uid": "github/phylo42/RAPPAS", "html_url": "https://rseng.github.io/software/repository/github/phylo42/RAPPAS", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/RAPPAS"}, {"uid": "github/phylo42/EPIK", "html_url": "https://rseng.github.io/software/repository/github/phylo42/EPIK", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/EPIK"}, {"uid": "github/LukeDuttweiler/skipTrack", "html_url": "https://rseng.github.io/software/repository/github/LukeDuttweiler/skipTrack", "api_url": "https://rseng.github.io/software/api/repos/github/LukeDuttweiler/skipTrack"}, {"uid": "github/phpuech/OT_Analysis", "html_url": "https://rseng.github.io/software/repository/github/phpuech/OT_Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phpuech/OT_Analysis"}, {"uid": "github/jeremiah-corrado/fem_2d", "html_url": "https://rseng.github.io/software/repository/github/jeremiah-corrado/fem_2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeremiah-corrado/fem_2d"}, {"uid": "github/noatgnu/catapult", "html_url": "https://rseng.github.io/software/repository/github/noatgnu/catapult", "api_url": "https://rseng.github.io/software/api/repos/github/noatgnu/catapult"}, {"uid": "github/oleksulkowski/Syn-CpG-Spacer", "html_url": "https://rseng.github.io/software/repository/github/oleksulkowski/Syn-CpG-Spacer", "api_url": "https://rseng.github.io/software/api/repos/github/oleksulkowski/Syn-CpG-Spacer"}, {"uid": "github/mortonne/psifr", "html_url": "https://rseng.github.io/software/repository/github/mortonne/psifr", "api_url": "https://rseng.github.io/software/api/repos/github/mortonne/psifr"}, {"uid": "github/mwhosek/extlaw_H18", "html_url": "https://rseng.github.io/software/repository/github/mwhosek/extlaw_H18", "api_url": "https://rseng.github.io/software/api/repos/github/mwhosek/extlaw_H18"}, {"uid": "github/SNOwGLoBES/snowglobes", "html_url": "https://rseng.github.io/software/repository/github/SNOwGLoBES/snowglobes", "api_url": "https://rseng.github.io/software/api/repos/github/SNOwGLoBES/snowglobes"}, {"uid": "github/UBC-Astrophysics/kd-match", "html_url": "https://rseng.github.io/software/repository/github/UBC-Astrophysics/kd-match", "api_url": "https://rseng.github.io/software/api/repos/github/UBC-Astrophysics/kd-match"}, {"uid": "github/pierrepeterlongo/back_to_sequences", "html_url": "https://rseng.github.io/software/repository/github/pierrepeterlongo/back_to_sequences", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepeterlongo/back_to_sequences"}, {"uid": "github/loneknightpy/idba", "html_url": "https://rseng.github.io/software/repository/github/loneknightpy/idba", "api_url": "https://rseng.github.io/software/api/repos/github/loneknightpy/idba"}, {"uid": "github/TomWagg/cogsworth", "html_url": "https://rseng.github.io/software/repository/github/TomWagg/cogsworth", "api_url": "https://rseng.github.io/software/api/repos/github/TomWagg/cogsworth"}, {"uid": "github/sndik16/GAMA_quasarhosts_starformation", "html_url": "https://rseng.github.io/software/repository/github/sndik16/GAMA_quasarhosts_starformation", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/GAMA_quasarhosts_starformation"}, {"uid": "github/sndik16/SFR_ChebyFit_example", "html_url": "https://rseng.github.io/software/repository/github/sndik16/SFR_ChebyFit_example", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/SFR_ChebyFit_example"}, {"uid": "github/sndik16/light-GG", "html_url": "https://rseng.github.io/software/repository/github/sndik16/light-GG", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/light-GG"}, {"uid": "github/OttoStruve/muler", "html_url": "https://rseng.github.io/software/repository/github/OttoStruve/muler", "api_url": "https://rseng.github.io/software/api/repos/github/OttoStruve/muler"}, {"uid": "github/saphir746/BiobankRead-Bash", "html_url": "https://rseng.github.io/software/repository/github/saphir746/BiobankRead-Bash", "api_url": "https://rseng.github.io/software/api/repos/github/saphir746/BiobankRead-Bash"}, {"uid": "github/vcflib/bio-vcf", "html_url": "https://rseng.github.io/software/repository/github/vcflib/bio-vcf", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/bio-vcf"}, {"uid": "github/vcflib/vcflib", "html_url": "https://rseng.github.io/software/repository/github/vcflib/vcflib", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/vcflib"}, {"uid": "github/danielhuson/malt", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/malt", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/malt"}, {"uid": "github/danielhuson/dendroscope3", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/dendroscope3", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/dendroscope3"}, {"uid": "github/danielhuson/jloda", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/jloda", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/jloda"}, {"uid": "github/danielhuson/megan-ce", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/megan-ce", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/megan-ce"}, {"uid": "github/jbuisine/macop", "html_url": "https://rseng.github.io/software/repository/github/jbuisine/macop", "api_url": "https://rseng.github.io/software/api/repos/github/jbuisine/macop"}, {"uid": "github/mib-unitn/SoFT", "html_url": "https://rseng.github.io/software/repository/github/mib-unitn/SoFT", "api_url": "https://rseng.github.io/software/api/repos/github/mib-unitn/SoFT"}, {"uid": "github/clemson-cal/sailfish", "html_url": "https://rseng.github.io/software/repository/github/clemson-cal/sailfish", "api_url": "https://rseng.github.io/software/api/repos/github/clemson-cal/sailfish"}, {"uid": "github/moead-framework/framework", "html_url": "https://rseng.github.io/software/repository/github/moead-framework/framework", "api_url": "https://rseng.github.io/software/api/repos/github/moead-framework/framework"}, {"uid": "github/IMB-Computational-Genomics-Lab/scGPS", "html_url": "https://rseng.github.io/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", "api_url": "https://rseng.github.io/software/api/repos/github/IMB-Computational-Genomics-Lab/scGPS"}, {"uid": "github/gotsunami/Youpi", "html_url": "https://rseng.github.io/software/repository/github/gotsunami/Youpi", "api_url": "https://rseng.github.io/software/api/repos/github/gotsunami/Youpi"}, {"uid": "github/MorgansLab/OSCILOS_Long", "html_url": "https://rseng.github.io/software/repository/github/MorgansLab/OSCILOS_Long", "api_url": "https://rseng.github.io/software/api/repos/github/MorgansLab/OSCILOS_Long"}, {"uid": "github/ruizengalways/FOD-Net", "html_url": "https://rseng.github.io/software/repository/github/ruizengalways/FOD-Net", "api_url": "https://rseng.github.io/software/api/repos/github/ruizengalways/FOD-Net"}, {"uid": "github/astroumd/miriad", "html_url": "https://rseng.github.io/software/repository/github/astroumd/miriad", "api_url": "https://rseng.github.io/software/api/repos/github/astroumd/miriad"}, {"uid": "github/antoinediez/Sisyphe", "html_url": "https://rseng.github.io/software/repository/github/antoinediez/Sisyphe", "api_url": "https://rseng.github.io/software/api/repos/github/antoinediez/Sisyphe"}, {"uid": "github/CIbiv/guaCAMOLE", "html_url": "https://rseng.github.io/software/repository/github/CIbiv/guaCAMOLE", "api_url": "https://rseng.github.io/software/api/repos/github/CIbiv/guaCAMOLE"}, {"uid": "github/jcolinhill/pyilc", "html_url": "https://rseng.github.io/software/repository/github/jcolinhill/pyilc", "api_url": "https://rseng.github.io/software/api/repos/github/jcolinhill/pyilc"}, {"uid": "github/geckos-survey/ngist", "html_url": "https://rseng.github.io/software/repository/github/geckos-survey/ngist", "api_url": "https://rseng.github.io/software/api/repos/github/geckos-survey/ngist"}, {"uid": "github/aris-mav/NMRInversions.jl", "html_url": "https://rseng.github.io/software/repository/github/aris-mav/NMRInversions.jl", "api_url": "https://rseng.github.io/software/api/repos/github/aris-mav/NMRInversions.jl"}, {"uid": "github/ebachelet/pyLIMA", "html_url": "https://rseng.github.io/software/repository/github/ebachelet/pyLIMA", "api_url": "https://rseng.github.io/software/api/repos/github/ebachelet/pyLIMA"}, {"uid": "github/lehtiolab/msstitch", "html_url": "https://rseng.github.io/software/repository/github/lehtiolab/msstitch", "api_url": "https://rseng.github.io/software/api/repos/github/lehtiolab/msstitch"}, {"uid": "github/sebastien-plutniak/archeofrag", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeofrag", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeofrag"}, {"uid": "github/sebastien-plutniak/archeoviz", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeoviz", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeoviz"}, {"uid": "github/relipmoc/skewer", "html_url": "https://rseng.github.io/software/repository/github/relipmoc/skewer", "api_url": "https://rseng.github.io/software/api/repos/github/relipmoc/skewer"}, {"uid": "github/felipeelorrieta/IAR_Model", "html_url": "https://rseng.github.io/software/repository/github/felipeelorrieta/IAR_Model", "api_url": "https://rseng.github.io/software/api/repos/github/felipeelorrieta/IAR_Model"}, {"uid": "github/qcxms/QCxMS", "html_url": "https://rseng.github.io/software/repository/github/qcxms/QCxMS", "api_url": "https://rseng.github.io/software/api/repos/github/qcxms/QCxMS"}, {"uid": "github/xiaziyna/PyStarshade", "html_url": "https://rseng.github.io/software/repository/github/xiaziyna/PyStarshade", "api_url": "https://rseng.github.io/software/api/repos/github/xiaziyna/PyStarshade"}, {"uid": "github/Bios4Biol/intronSeeker", "html_url": "https://rseng.github.io/software/repository/github/Bios4Biol/intronSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/Bios4Biol/intronSeeker"}, {"uid": "github/AngryMaciek/hypercomplex", "html_url": "https://rseng.github.io/software/repository/github/AngryMaciek/hypercomplex", "api_url": "https://rseng.github.io/software/api/repos/github/AngryMaciek/hypercomplex"}, {"uid": "github/m-dadej/MarSwitching.jl", "html_url": "https://rseng.github.io/software/repository/github/m-dadej/MarSwitching.jl", "api_url": "https://rseng.github.io/software/api/repos/github/m-dadej/MarSwitching.jl"}, {"uid": "github/MrOlm/drep", "html_url": "https://rseng.github.io/software/repository/github/MrOlm/drep", "api_url": "https://rseng.github.io/software/api/repos/github/MrOlm/drep"}, {"uid": "github/bodulic/CATS-rb", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rb", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rb"}, {"uid": "github/bodulic/CATS-rf", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rf", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rf"}, {"uid": "github/weiliu123/PCLassoReg", "html_url": "https://rseng.github.io/software/repository/github/weiliu123/PCLassoReg", "api_url": "https://rseng.github.io/software/api/repos/github/weiliu123/PCLassoReg"}, {"uid": "github/OpenMD/OpenMD", "html_url": "https://rseng.github.io/software/repository/github/OpenMD/OpenMD", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMD/OpenMD"}, {"uid": "github/Nicholaswogan/PhotochemPy", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/PhotochemPy", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/PhotochemPy"}, {"uid": "github/Nicholaswogan/photochem", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/photochem", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/photochem"}, {"uid": "github/onnela-lab/beiwe-backend", "html_url": "https://rseng.github.io/software/repository/github/onnela-lab/beiwe-backend", "api_url": "https://rseng.github.io/software/api/repos/github/onnela-lab/beiwe-backend"}, {"uid": "github/ICRAR/libprofit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/libprofit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/libprofit"}, {"uid": "github/ICRAR/shark", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/shark"}, {"uid": "github/ICRAR/ProFit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/ProFit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/ProFit"}, {"uid": "github/cov-lineages/pangoLEARN", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangoLEARN", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangoLEARN"}, {"uid": "github/cov-lineages/pangolin", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangolin"}, {"uid": "github/shbhuk/barycorrpy", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/barycorrpy", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/barycorrpy"}, {"uid": "github/shbhuk/mrexo", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/mrexo", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/mrexo"}, {"uid": "github/firedrakeproject/checkpoint_schedules", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/checkpoint_schedules", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/checkpoint_schedules"}, {"uid": "github/firedrakeproject/gusto", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/gusto", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/gusto"}, {"uid": "github/firedrakeproject/firedrake", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/firedrake", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/firedrake"}, {"uid": "github/linnarsson-lab/loompy", "html_url": "https://rseng.github.io/software/repository/github/linnarsson-lab/loompy", "api_url": "https://rseng.github.io/software/api/repos/github/linnarsson-lab/loompy"}, {"uid": "github/iopenshell/ezSpectrum", "html_url": "https://rseng.github.io/software/repository/github/iopenshell/ezSpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/iopenshell/ezSpectrum"}, {"uid": "github/raddleverse/MimiBRICK.jl", "html_url": "https://rseng.github.io/software/repository/github/raddleverse/MimiBRICK.jl", "api_url": "https://rseng.github.io/software/api/repos/github/raddleverse/MimiBRICK.jl"}, {"uid": "github/liuhong-jia/scAnno", "html_url": "https://rseng.github.io/software/repository/github/liuhong-jia/scAnno", "api_url": "https://rseng.github.io/software/api/repos/github/liuhong-jia/scAnno"}, {"uid": "github/esquivas/guacho", "html_url": "https://rseng.github.io/software/repository/github/esquivas/guacho", "api_url": "https://rseng.github.io/software/api/repos/github/esquivas/guacho"}, {"uid": "github/sourmash-bio/sourmash", "html_url": "https://rseng.github.io/software/repository/github/sourmash-bio/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/sourmash-bio/sourmash"}, {"uid": "github/amromics/panta", "html_url": "https://rseng.github.io/software/repository/github/amromics/panta", "api_url": "https://rseng.github.io/software/api/repos/github/amromics/panta"}, {"uid": "github/annayqho/TheCannon", "html_url": "https://rseng.github.io/software/repository/github/annayqho/TheCannon", "api_url": "https://rseng.github.io/software/api/repos/github/annayqho/TheCannon"}, {"uid": "github/GOALS-survey/CAFE", "html_url": "https://rseng.github.io/software/repository/github/GOALS-survey/CAFE", "api_url": "https://rseng.github.io/software/api/repos/github/GOALS-survey/CAFE"}, {"uid": "github/ni1o1/transbigdata", "html_url": "https://rseng.github.io/software/repository/github/ni1o1/transbigdata", "api_url": "https://rseng.github.io/software/api/repos/github/ni1o1/transbigdata"}, {"uid": "github/Gabaldonlab/crossmapper", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/crossmapper", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/crossmapper"}, {"uid": "github/Gabaldonlab/karyon", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/karyon", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/karyon"}, {"uid": "github/Gabaldonlab/perSVade", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/perSVade", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/perSVade"}, {"uid": "github/Gabaldonlab/jloh", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/jloh", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/jloh"}, {"uid": "github/ihmwg/python-modelcif", "html_url": "https://rseng.github.io/software/repository/github/ihmwg/python-modelcif", "api_url": "https://rseng.github.io/software/api/repos/github/ihmwg/python-modelcif"}, {"uid": "github/Battery-Intelligence-Lab/dtw-cpp", "html_url": "https://rseng.github.io/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", "api_url": "https://rseng.github.io/software/api/repos/github/Battery-Intelligence-Lab/dtw-cpp"}, {"uid": "github/ugovaretto/molekel", "html_url": "https://rseng.github.io/software/repository/github/ugovaretto/molekel", "api_url": "https://rseng.github.io/software/api/repos/github/ugovaretto/molekel"}, {"uid": "github/egjergo/galcem", "html_url": "https://rseng.github.io/software/repository/github/egjergo/galcem", "api_url": "https://rseng.github.io/software/api/repos/github/egjergo/galcem"}, {"uid": "github/radio-astro-tools/spectral-cube", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/spectral-cube", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/spectral-cube"}, {"uid": "github/radio-astro-tools/pvextractor", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/pvextractor", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/pvextractor"}, {"uid": "github/radio-astro-tools/uvcombine", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/uvcombine", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/uvcombine"}, {"uid": "github/akashdhruv/BoxKit", "html_url": "https://rseng.github.io/software/repository/github/akashdhruv/BoxKit", "api_url": "https://rseng.github.io/software/api/repos/github/akashdhruv/BoxKit"}, {"uid": "github/oskarhs/AutoHist.jl", "html_url": "https://rseng.github.io/software/repository/github/oskarhs/AutoHist.jl", "api_url": "https://rseng.github.io/software/api/repos/github/oskarhs/AutoHist.jl"}, {"uid": "github/r-lib/gert", "html_url": "https://rseng.github.io/software/repository/github/r-lib/gert", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/gert"}, {"uid": "github/r-lib/credentials", "html_url": "https://rseng.github.io/software/repository/github/r-lib/credentials", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/credentials"}, {"uid": "github/r-lib/lintr", "html_url": "https://rseng.github.io/software/repository/github/r-lib/lintr", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/lintr"}, {"uid": "github/genotoul-bioinfo/Binette", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/Binette", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/Binette"}, {"uid": "github/genotoul-bioinfo/dgenies", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/dgenies", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/dgenies"}, {"uid": "github/pawni/BayesByHypernet", "html_url": "https://rseng.github.io/software/repository/github/pawni/BayesByHypernet", "api_url": "https://rseng.github.io/software/api/repos/github/pawni/BayesByHypernet"}, {"uid": "github/mlysy/LocalCop", "html_url": "https://rseng.github.io/software/repository/github/mlysy/LocalCop", "api_url": "https://rseng.github.io/software/api/repos/github/mlysy/LocalCop"}, {"uid": "github/mpeel/fastcc", "html_url": "https://rseng.github.io/software/repository/github/mpeel/fastcc", "api_url": "https://rseng.github.io/software/api/repos/github/mpeel/fastcc"}, {"uid": "github/spacetelescope/synphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/synphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/synphot_refactor"}, {"uid": "github/spacetelescope/hst_cosmic_rays", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/hst_cosmic_rays", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/hst_cosmic_rays"}, {"uid": "github/spacetelescope/stsynphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsynphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsynphot_refactor"}, {"uid": "github/spacetelescope/spaceKLIP", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/spaceKLIP", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/spaceKLIP"}, {"uid": "github/spacetelescope/astronify", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/astronify", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/astronify"}, {"uid": "github/spacetelescope/specview", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specview", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specview"}, {"uid": "github/spacetelescope/pystortion", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/pystortion", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/pystortion"}, {"uid": "github/spacetelescope/imexam", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/imexam", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/imexam"}, {"uid": "github/spacetelescope/specviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specviz"}, {"uid": "github/spacetelescope/jdaviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/jdaviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/jdaviz"}, {"uid": "github/spacetelescope/exovetter", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/exovetter", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/exovetter"}, {"uid": "github/spacetelescope/stsdas_stripped", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsdas_stripped", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsdas_stripped"}, {"uid": "github/spacetelescope/stginga", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stginga", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stginga"}, {"uid": "github/spacetelescope/mirage", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/mirage", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/mirage"}, {"uid": "github/YihanWangAstro/SpaceHub", "html_url": "https://rseng.github.io/software/repository/github/YihanWangAstro/SpaceHub", "api_url": "https://rseng.github.io/software/api/repos/github/YihanWangAstro/SpaceHub"}, {"uid": "github/vitor-de-oliveira/rheovolution", "html_url": "https://rseng.github.io/software/repository/github/vitor-de-oliveira/rheovolution", "api_url": "https://rseng.github.io/software/api/repos/github/vitor-de-oliveira/rheovolution"}, {"uid": "github/jiahecui/SenAOReFoc", "html_url": "https://rseng.github.io/software/repository/github/jiahecui/SenAOReFoc", "api_url": "https://rseng.github.io/software/api/repos/github/jiahecui/SenAOReFoc"}, {"uid": "github/zhanglabtools/CASAVA", "html_url": "https://rseng.github.io/software/repository/github/zhanglabtools/CASAVA", "api_url": "https://rseng.github.io/software/api/repos/github/zhanglabtools/CASAVA"}, {"uid": "github/astro-seanwhy/ExoInt", "html_url": "https://rseng.github.io/software/repository/github/astro-seanwhy/ExoInt", "api_url": "https://rseng.github.io/software/api/repos/github/astro-seanwhy/ExoInt"}, {"uid": "github/CIRADA-Tools/RM-Tools", "html_url": "https://rseng.github.io/software/repository/github/CIRADA-Tools/RM-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/CIRADA-Tools/RM-Tools"}, {"uid": "github/spectrapepper/spectrapepper", "html_url": "https://rseng.github.io/software/repository/github/spectrapepper/spectrapepper", "api_url": "https://rseng.github.io/software/api/repos/github/spectrapepper/spectrapepper"}, {"uid": "github/JoeMcEwen/FAST-PT", "html_url": "https://rseng.github.io/software/repository/github/JoeMcEwen/FAST-PT", "api_url": "https://rseng.github.io/software/api/repos/github/JoeMcEwen/FAST-PT"}, {"uid": "github/joe-antognini/kozai", "html_url": "https://rseng.github.io/software/repository/github/joe-antognini/kozai", "api_url": "https://rseng.github.io/software/api/repos/github/joe-antognini/kozai"}, {"uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "html_url": "https://rseng.github.io/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "api_url": "https://rseng.github.io/software/api/repos/github/NCAR/NCAR-Classic-Libraries-for-Geophysics"}, {"uid": "github/CTU-Bern/presize", "html_url": "https://rseng.github.io/software/repository/github/CTU-Bern/presize", "api_url": "https://rseng.github.io/software/api/repos/github/CTU-Bern/presize"}, {"uid": "github/mjacob1002/Eir", "html_url": "https://rseng.github.io/software/repository/github/mjacob1002/Eir", "api_url": "https://rseng.github.io/software/api/repos/github/mjacob1002/Eir"}, {"uid": "github/zhangrengang/SubPhaser", "html_url": "https://rseng.github.io/software/repository/github/zhangrengang/SubPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/zhangrengang/SubPhaser"}, {"uid": "github/vbakis/mrs", "html_url": "https://rseng.github.io/software/repository/github/vbakis/mrs", "api_url": "https://rseng.github.io/software/api/repos/github/vbakis/mrs"}, {"uid": "github/Taywee/args", "html_url": "https://rseng.github.io/software/repository/github/Taywee/args", "api_url": "https://rseng.github.io/software/api/repos/github/Taywee/args"}, {"uid": "github/NREL/OpenOA", "html_url": "https://rseng.github.io/software/repository/github/NREL/OpenOA", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/OpenOA"}, {"uid": "github/NREL/VirtualEngineering", "html_url": "https://rseng.github.io/software/repository/github/NREL/VirtualEngineering", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/VirtualEngineering"}, {"uid": "github/NREL/G2Aero", "html_url": "https://rseng.github.io/software/repository/github/NREL/G2Aero", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/G2Aero"}, {"uid": "github/NREL/graph-env", "html_url": "https://rseng.github.io/software/repository/github/NREL/graph-env", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/graph-env"}, {"uid": "github/silx-kit/pyFAI", "html_url": "https://rseng.github.io/software/repository/github/silx-kit/pyFAI", "api_url": "https://rseng.github.io/software/api/repos/github/silx-kit/pyFAI"}, {"uid": "github/chianti-atomic/ChiantiPy", "html_url": "https://rseng.github.io/software/repository/github/chianti-atomic/ChiantiPy", "api_url": "https://rseng.github.io/software/api/repos/github/chianti-atomic/ChiantiPy"}, {"uid": "github/Tomcxf/FASTdRNA", "html_url": "https://rseng.github.io/software/repository/github/Tomcxf/FASTdRNA", "api_url": "https://rseng.github.io/software/api/repos/github/Tomcxf/FASTdRNA"}, {"uid": "github/phenomecentre/nPYc-Toolbox", "html_url": "https://rseng.github.io/software/repository/github/phenomecentre/nPYc-Toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/phenomecentre/nPYc-Toolbox"}, {"uid": "github/Kaixhin/Atari", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Atari", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Atari"}, {"uid": "github/Kaixhin/Rainbow", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Rainbow", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Rainbow"}, {"uid": "github/Kaixhin/FGLab", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGLab", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGLab"}, {"uid": "github/Kaixhin/dockerfiles", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/dockerfiles", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/dockerfiles"}, {"uid": "github/Kaixhin/spinning-up-basic", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/spinning-up-basic", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/spinning-up-basic"}, {"uid": "github/Kaixhin/FGMachine", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGMachine", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGMachine"}, {"uid": "github/Kaixhin/PlaNet", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/PlaNet", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/PlaNet"}, {"uid": "github/Kaixhin/Autoencoders", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Autoencoders", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Autoencoders"}, {"uid": "github/sylvainprigent/napari-tracks-reader", "html_url": "https://rseng.github.io/software/repository/github/sylvainprigent/napari-tracks-reader", "api_url": "https://rseng.github.io/software/api/repos/github/sylvainprigent/napari-tracks-reader"}, {"uid": "github/SevgiAkten/pycellga", "html_url": "https://rseng.github.io/software/repository/github/SevgiAkten/pycellga", "api_url": "https://rseng.github.io/software/api/repos/github/SevgiAkten/pycellga"}, {"uid": "github/metagentools/gbintk", "html_url": "https://rseng.github.io/software/repository/github/metagentools/gbintk", "api_url": "https://rseng.github.io/software/api/repos/github/metagentools/gbintk"}, {"uid": "github/freesurfer/freesurfer", "html_url": "https://rseng.github.io/software/repository/github/freesurfer/freesurfer", "api_url": "https://rseng.github.io/software/api/repos/github/freesurfer/freesurfer"}, {"uid": "github/metabolomicsworkbench/MetGENE", "html_url": "https://rseng.github.io/software/repository/github/metabolomicsworkbench/MetGENE", "api_url": "https://rseng.github.io/software/api/repos/github/metabolomicsworkbench/MetGENE"}, {"uid": "github/martinvonk/SPEI", "html_url": "https://rseng.github.io/software/repository/github/martinvonk/SPEI", "api_url": "https://rseng.github.io/software/api/repos/github/martinvonk/SPEI"}, {"uid": "github/dnonatar/Sequoia", "html_url": "https://rseng.github.io/software/repository/github/dnonatar/Sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/dnonatar/Sequoia"}, {"uid": "github/szhorvat/IGraphM", "html_url": "https://rseng.github.io/software/repository/github/szhorvat/IGraphM", "api_url": "https://rseng.github.io/software/api/repos/github/szhorvat/IGraphM"}, {"uid": "github/NGSolve/ngsPETSc", "html_url": "https://rseng.github.io/software/repository/github/NGSolve/ngsPETSc", "api_url": "https://rseng.github.io/software/api/repos/github/NGSolve/ngsPETSc"}, {"uid": "github/dmvandamt/beyonce", "html_url": "https://rseng.github.io/software/repository/github/dmvandamt/beyonce", "api_url": "https://rseng.github.io/software/api/repos/github/dmvandamt/beyonce"}, {"uid": "github/Beryl-Jingxin/PyExoCross", "html_url": "https://rseng.github.io/software/repository/github/Beryl-Jingxin/PyExoCross", "api_url": "https://rseng.github.io/software/api/repos/github/Beryl-Jingxin/PyExoCross"}, {"uid": "github/nithyanandan/PRISim", "html_url": "https://rseng.github.io/software/repository/github/nithyanandan/PRISim", "api_url": "https://rseng.github.io/software/api/repos/github/nithyanandan/PRISim"}, {"uid": "github/ComtekAdvancedStructures/cmstatr", "html_url": "https://rseng.github.io/software/repository/github/ComtekAdvancedStructures/cmstatr", "api_url": "https://rseng.github.io/software/api/repos/github/ComtekAdvancedStructures/cmstatr"}, {"uid": "github/cobilab/OptimJV3", "html_url": "https://rseng.github.io/software/repository/github/cobilab/OptimJV3", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/OptimJV3"}, {"uid": "github/cobilab/altair", "html_url": "https://rseng.github.io/software/repository/github/cobilab/altair", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/altair"}, {"uid": "github/cobilab/RFSC", "html_url": "https://rseng.github.io/software/repository/github/cobilab/RFSC", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/RFSC"}, {"uid": "github/tmcclintock/AReconstructionTool", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/AReconstructionTool", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/AReconstructionTool"}, {"uid": "github/tmcclintock/cluster_toolkit", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/cluster_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/cluster_toolkit"}, {"uid": "github/emunte/vaRHC", "html_url": "https://rseng.github.io/software/repository/github/emunte/vaRHC", "api_url": "https://rseng.github.io/software/api/repos/github/emunte/vaRHC"}, {"uid": "github/hrwakeford/ExoTiC-ISM", "html_url": "https://rseng.github.io/software/repository/github/hrwakeford/ExoTiC-ISM", "api_url": "https://rseng.github.io/software/api/repos/github/hrwakeford/ExoTiC-ISM"}, {"uid": "github/MAnalytics/akmedoids", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/akmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/akmedoids"}, {"uid": "github/MAnalytics/opitools", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/opitools", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/opitools"}, {"uid": "github/Materials-Consortia/OPTIMADE-Filter", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/OPTIMADE-Filter", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/OPTIMADE-Filter"}, {"uid": "github/Materials-Consortia/optimade-python-tools", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/optimade-python-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/optimade-python-tools"}, {"uid": "github/matsen/pplacer", "html_url": "https://rseng.github.io/software/repository/github/matsen/pplacer", "api_url": "https://rseng.github.io/software/api/repos/github/matsen/pplacer"}, {"uid": "github/inrae/RCaNmodel", "html_url": "https://rseng.github.io/software/repository/github/inrae/RCaNmodel", "api_url": "https://rseng.github.io/software/api/repos/github/inrae/RCaNmodel"}, {"uid": "github/kevin218/Eureka", "html_url": "https://rseng.github.io/software/repository/github/kevin218/Eureka", "api_url": "https://rseng.github.io/software/api/repos/github/kevin218/Eureka"}, {"uid": "github/smaret/astrochem", "html_url": "https://rseng.github.io/software/repository/github/smaret/astrochem", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/astrochem"}, {"uid": "github/smaret/thindisk", "html_url": "https://rseng.github.io/software/repository/github/smaret/thindisk", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/thindisk"}, {"uid": "github/FAU-LAP/NOMAD-CAMELS", "html_url": "https://rseng.github.io/software/repository/github/FAU-LAP/NOMAD-CAMELS", "api_url": "https://rseng.github.io/software/api/repos/github/FAU-LAP/NOMAD-CAMELS"}, {"uid": "github/computational-metabolomics/dimspy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/dimspy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/dimspy"}, {"uid": "github/computational-metabolomics/msnpy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/msnpy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/msnpy"}, {"uid": "github/samb8s/PsrPopPy", "html_url": "https://rseng.github.io/software/repository/github/samb8s/PsrPopPy", "api_url": "https://rseng.github.io/software/api/repos/github/samb8s/PsrPopPy"}, {"uid": "github/21cmfast/21cmEMU", "html_url": "https://rseng.github.io/software/repository/github/21cmfast/21cmEMU", "api_url": "https://rseng.github.io/software/api/repos/github/21cmfast/21cmEMU"}, {"uid": "github/STAR-Fusion/STAR-Fusion", "html_url": "https://rseng.github.io/software/repository/github/STAR-Fusion/STAR-Fusion", "api_url": "https://rseng.github.io/software/api/repos/github/STAR-Fusion/STAR-Fusion"}, {"uid": "github/PASTAQ-MS/PASTAQ", "html_url": "https://rseng.github.io/software/repository/github/PASTAQ-MS/PASTAQ", "api_url": "https://rseng.github.io/software/api/repos/github/PASTAQ-MS/PASTAQ"}, {"uid": "github/jdswinbank/Comet", "html_url": "https://rseng.github.io/software/repository/github/jdswinbank/Comet", "api_url": "https://rseng.github.io/software/api/repos/github/jdswinbank/Comet"}, {"uid": "github/LaRoccaRaphael/MSI_recalibration", "html_url": "https://rseng.github.io/software/repository/github/LaRoccaRaphael/MSI_recalibration", "api_url": "https://rseng.github.io/software/api/repos/github/LaRoccaRaphael/MSI_recalibration"}, {"uid": "github/jollejolles/pirecorder", "html_url": "https://rseng.github.io/software/repository/github/jollejolles/pirecorder", "api_url": "https://rseng.github.io/software/api/repos/github/jollejolles/pirecorder"}, {"uid": "github/smandal97/Sprout", "html_url": "https://rseng.github.io/software/repository/github/smandal97/Sprout", "api_url": "https://rseng.github.io/software/api/repos/github/smandal97/Sprout"}, {"uid": "github/Ompha/CLUES", "html_url": "https://rseng.github.io/software/repository/github/Ompha/CLUES", "api_url": "https://rseng.github.io/software/api/repos/github/Ompha/CLUES"}, {"uid": "github/n-claes/legolas", "html_url": "https://rseng.github.io/software/repository/github/n-claes/legolas", "api_url": "https://rseng.github.io/software/api/repos/github/n-claes/legolas"}, {"uid": "github/doriancazeneuve/ODNet", "html_url": "https://rseng.github.io/software/repository/github/doriancazeneuve/ODNet", "api_url": "https://rseng.github.io/software/api/repos/github/doriancazeneuve/ODNet"}, {"uid": "github/maize-genetics/rTASSEL", "html_url": "https://rseng.github.io/software/repository/github/maize-genetics/rTASSEL", "api_url": "https://rseng.github.io/software/api/repos/github/maize-genetics/rTASSEL"}, {"uid": "github/IndrajeetPatil/ggstatsplot", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/ggstatsplot", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/ggstatsplot"}, {"uid": "github/IndrajeetPatil/statsExpressions", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/statsExpressions", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/statsExpressions"}, {"uid": "github/TingMAC/FrMLNet", "html_url": "https://rseng.github.io/software/repository/github/TingMAC/FrMLNet", "api_url": "https://rseng.github.io/software/api/repos/github/TingMAC/FrMLNet"}, {"uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", "html_url": "https://rseng.github.io/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", "api_url": "https://rseng.github.io/software/api/repos/github/TeHanHunter/TESS_Gaia_Light_Curve"}, {"uid": "github/neherlab/nextalign", "html_url": "https://rseng.github.io/software/repository/github/neherlab/nextalign", "api_url": "https://rseng.github.io/software/api/repos/github/neherlab/nextalign"}, {"uid": "github/grimme-lab/xtb", "html_url": "https://rseng.github.io/software/repository/github/grimme-lab/xtb", "api_url": "https://rseng.github.io/software/api/repos/github/grimme-lab/xtb"}, {"uid": "github/ruggiero/galstep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/galstep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/galstep"}, {"uid": "github/ruggiero/clustep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/clustep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/clustep"}, {"uid": "github/mcfrith/tandem-genotypes", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/tandem-genotypes", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/tandem-genotypes"}, {"uid": "github/mcfrith/dnarrange", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/dnarrange", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/dnarrange"}, {"uid": "github/haotianteng/BoostNano", "html_url": "https://rseng.github.io/software/repository/github/haotianteng/BoostNano", "api_url": "https://rseng.github.io/software/api/repos/github/haotianteng/BoostNano"}, {"uid": "github/hungyipu/Odyssey", "html_url": "https://rseng.github.io/software/repository/github/hungyipu/Odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/hungyipu/Odyssey"}, {"uid": "github/meganmansfield/IGRINS_transit", "html_url": "https://rseng.github.io/software/repository/github/meganmansfield/IGRINS_transit", "api_url": "https://rseng.github.io/software/api/repos/github/meganmansfield/IGRINS_transit"}, {"uid": "github/zqfang/gseapy", "html_url": "https://rseng.github.io/software/repository/github/zqfang/gseapy", "api_url": "https://rseng.github.io/software/api/repos/github/zqfang/gseapy"}, {"uid": "github/astro-friedel/CADRE", "html_url": "https://rseng.github.io/software/repository/github/astro-friedel/CADRE", "api_url": "https://rseng.github.io/software/api/repos/github/astro-friedel/CADRE"}, {"uid": "github/cog-imperial/GPdoemd", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/GPdoemd", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/GPdoemd"}, {"uid": "github/cog-imperial/suspect", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/suspect", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/suspect"}, {"uid": "github/cog-imperial/entmoot", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/entmoot", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/entmoot"}, {"uid": "github/cog-imperial/galini", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/galini", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/galini"}, {"uid": "github/annagraff/densify", "html_url": "https://rseng.github.io/software/repository/github/annagraff/densify", "api_url": "https://rseng.github.io/software/api/repos/github/annagraff/densify"}, {"uid": "github/lanl/PyBNF", "html_url": "https://rseng.github.io/software/repository/github/lanl/PyBNF", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/PyBNF"}, {"uid": "github/lanl/CosmicEmu", "html_url": "https://rseng.github.io/software/repository/github/lanl/CosmicEmu", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/CosmicEmu"}, {"uid": "github/lanl/swiftbat_python", "html_url": "https://rseng.github.io/software/repository/github/lanl/swiftbat_python", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/swiftbat_python"}, {"uid": "github/lanl/spiner", "html_url": "https://rseng.github.io/software/repository/github/lanl/spiner", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/spiner"}, {"uid": "github/lanl/singularity-eos", "html_url": "https://rseng.github.io/software/repository/github/lanl/singularity-eos", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/singularity-eos"}, {"uid": "github/lanl/GLUE", "html_url": "https://rseng.github.io/software/repository/github/lanl/GLUE", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/GLUE"}, {"uid": "github/lanl/scico", "html_url": "https://rseng.github.io/software/repository/github/lanl/scico", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/scico"}, {"uid": "github/beagle-dev/beagle-lib", "html_url": "https://rseng.github.io/software/repository/github/beagle-dev/beagle-lib", "api_url": "https://rseng.github.io/software/api/repos/github/beagle-dev/beagle-lib"}, {"uid": "github/bbye98/mdcraft", "html_url": "https://rseng.github.io/software/repository/github/bbye98/mdcraft", "api_url": "https://rseng.github.io/software/api/repos/github/bbye98/mdcraft"}, {"uid": "github/everval/LongMemory.jl", "html_url": "https://rseng.github.io/software/repository/github/everval/LongMemory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/everval/LongMemory.jl"}, {"uid": "github/villano-lab/nrCascadeSim", "html_url": "https://rseng.github.io/software/repository/github/villano-lab/nrCascadeSim", "api_url": "https://rseng.github.io/software/api/repos/github/villano-lab/nrCascadeSim"}, {"uid": "github/zhangyk8/sconce-scms", "html_url": "https://rseng.github.io/software/repository/github/zhangyk8/sconce-scms", "api_url": "https://rseng.github.io/software/api/repos/github/zhangyk8/sconce-scms"}, {"uid": "github/mgalardini/pyseer", "html_url": "https://rseng.github.io/software/repository/github/mgalardini/pyseer", "api_url": "https://rseng.github.io/software/api/repos/github/mgalardini/pyseer"}, {"uid": "github/citation-file-format/cff-converter-python", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-converter-python", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-converter-python"}, {"uid": "github/citation-file-format/cff-initializer-javascript", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-initializer-javascript", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-initializer-javascript"}, {"uid": "github/citation-file-format/cffconvert-github-action", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cffconvert-github-action", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cffconvert-github-action"}, {"uid": "github/citation-file-format/citation-file-format", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/citation-file-format", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/citation-file-format"}, {"uid": "github/DessimozLab/read2tree", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/read2tree", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/read2tree"}, {"uid": "github/DessimozLab/omamer", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/omamer", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/omamer"}, {"uid": "github/rpetit3/fastq-scan", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-scan", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-scan"}, {"uid": "github/rpetit3/fastq-dl", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-dl", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-dl"}, {"uid": "github/gbernstein/gbdes", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/gbdes", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/gbdes"}, {"uid": "github/gbernstein/pixmappy", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/pixmappy", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/pixmappy"}, {"uid": "github/freelawproject/eyecite", "html_url": "https://rseng.github.io/software/repository/github/freelawproject/eyecite", "api_url": "https://rseng.github.io/software/api/repos/github/freelawproject/eyecite"}, {"uid": "github/GabrielNakamura/FishPhyloMaker", "html_url": "https://rseng.github.io/software/repository/github/GabrielNakamura/FishPhyloMaker", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielNakamura/FishPhyloMaker"}, {"uid": "github/LeandroOrdonez/explora-vr-dash-client", "html_url": "https://rseng.github.io/software/repository/github/LeandroOrdonez/explora-vr-dash-client", "api_url": "https://rseng.github.io/software/api/repos/github/LeandroOrdonez/explora-vr-dash-client"}, {"uid": "github/scikit-tda/DREiMac", "html_url": "https://rseng.github.io/software/repository/github/scikit-tda/DREiMac", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-tda/DREiMac"}, {"uid": "github/ArtificialStellarPopulations/ArtPop", "html_url": "https://rseng.github.io/software/repository/github/ArtificialStellarPopulations/ArtPop", "api_url": "https://rseng.github.io/software/api/repos/github/ArtificialStellarPopulations/ArtPop"}, {"uid": "github/GeoArkadeep/Stresslog", "html_url": "https://rseng.github.io/software/repository/github/GeoArkadeep/Stresslog", "api_url": "https://rseng.github.io/software/api/repos/github/GeoArkadeep/Stresslog"}, {"uid": "github/solerjuan/astroHOG", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/astroHOG", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/astroHOG"}, {"uid": "github/solerjuan/magnetar", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/magnetar", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/magnetar"}, {"uid": "github/xuequan818/MatrixFuns.jl", "html_url": "https://rseng.github.io/software/repository/github/xuequan818/MatrixFuns.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xuequan818/MatrixFuns.jl"}, {"uid": "github/esilver01/small-lens-forecast-sims", "html_url": "https://rseng.github.io/software/repository/github/esilver01/small-lens-forecast-sims", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/small-lens-forecast-sims"}, {"uid": "github/esilver01/resnet-model-training", "html_url": "https://rseng.github.io/software/repository/github/esilver01/resnet-model-training", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/resnet-model-training"}, {"uid": "github/korcsmarosgroup/TFlink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/TFlink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/TFlink"}, {"uid": "github/korcsmarosgroup/CytokineLink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/CytokineLink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/CytokineLink"}, {"uid": "github/shadden/celmech", "html_url": "https://rseng.github.io/software/repository/github/shadden/celmech", "api_url": "https://rseng.github.io/software/api/repos/github/shadden/celmech"}, {"uid": "github/NeamulKabir/EnsembleFam", "html_url": "https://rseng.github.io/software/repository/github/NeamulKabir/EnsembleFam", "api_url": "https://rseng.github.io/software/api/repos/github/NeamulKabir/EnsembleFam"}, {"uid": "github/carpyncho/carpyncho-py", "html_url": "https://rseng.github.io/software/repository/github/carpyncho/carpyncho-py", "api_url": "https://rseng.github.io/software/api/repos/github/carpyncho/carpyncho-py"}, {"uid": "github/ShixiangWang/sigminer", "html_url": "https://rseng.github.io/software/repository/github/ShixiangWang/sigminer", "api_url": "https://rseng.github.io/software/api/repos/github/ShixiangWang/sigminer"}, {"uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", "html_url": "https://rseng.github.io/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", "api_url": "https://rseng.github.io/software/api/repos/github/jmason86/James-s-EVE-Dimming-Index-JEDI"}, {"uid": "github/ESMValGroup/ESMValCore", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValCore", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValCore"}, {"uid": "github/ESMValGroup/ESMValTool", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValTool", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValTool"}, {"uid": "github/MBoemo/DNAscent", "html_url": "https://rseng.github.io/software/repository/github/MBoemo/DNAscent", "api_url": "https://rseng.github.io/software/api/repos/github/MBoemo/DNAscent"}, {"uid": "github/smith-chem-wisc/ProteaseGuru", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/ProteaseGuru", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/ProteaseGuru"}, {"uid": "github/smith-chem-wisc/MetaMorpheus", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/MetaMorpheus", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/MetaMorpheus"}, {"uid": "github/waynebhayes/SpArcFiRe", "html_url": "https://rseng.github.io/software/repository/github/waynebhayes/SpArcFiRe", "api_url": "https://rseng.github.io/software/api/repos/github/waynebhayes/SpArcFiRe"}, {"uid": "github/lyalpha/pympc", "html_url": "https://rseng.github.io/software/repository/github/lyalpha/pympc", "api_url": "https://rseng.github.io/software/api/repos/github/lyalpha/pympc"}, {"uid": "github/yanrong-stacy-song/creditr", "html_url": "https://rseng.github.io/software/repository/github/yanrong-stacy-song/creditr", "api_url": "https://rseng.github.io/software/api/repos/github/yanrong-stacy-song/creditr"}, {"uid": "github/gumilevskij/Framework", "html_url": "https://rseng.github.io/software/repository/github/gumilevskij/Framework", "api_url": "https://rseng.github.io/software/api/repos/github/gumilevskij/Framework"}, {"uid": "github/xuanxu/starmatrix", "html_url": "https://rseng.github.io/software/repository/github/xuanxu/starmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/xuanxu/starmatrix"}, {"uid": "github/madysonb/EVA", "html_url": "https://rseng.github.io/software/repository/github/madysonb/EVA", "api_url": "https://rseng.github.io/software/api/repos/github/madysonb/EVA"}, {"uid": "github/jtksai/PyCOOL", "html_url": "https://rseng.github.io/software/repository/github/jtksai/PyCOOL", "api_url": "https://rseng.github.io/software/api/repos/github/jtksai/PyCOOL"}, {"uid": "github/will-rowe/groot", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/groot", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/groot"}, {"uid": "github/will-rowe/hulk", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/hulk", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/hulk"}, {"uid": "github/tkchafin/autostreamtree", "html_url": "https://rseng.github.io/software/repository/github/tkchafin/autostreamtree", "api_url": "https://rseng.github.io/software/api/repos/github/tkchafin/autostreamtree"}, {"uid": "github/alexandercoulter/fastfrechet", "html_url": "https://rseng.github.io/software/repository/github/alexandercoulter/fastfrechet", "api_url": "https://rseng.github.io/software/api/repos/github/alexandercoulter/fastfrechet"}, {"uid": "github/ptriska/WavesDash", "html_url": "https://rseng.github.io/software/repository/github/ptriska/WavesDash", "api_url": "https://rseng.github.io/software/api/repos/github/ptriska/WavesDash"}, {"uid": "github/BiaPyX/BiaPy", "html_url": "https://rseng.github.io/software/repository/github/BiaPyX/BiaPy", "api_url": "https://rseng.github.io/software/api/repos/github/BiaPyX/BiaPy"}, {"uid": "github/NarlikarLab/exoDIVERSITY", "html_url": "https://rseng.github.io/software/repository/github/NarlikarLab/exoDIVERSITY", "api_url": "https://rseng.github.io/software/api/repos/github/NarlikarLab/exoDIVERSITY"}, {"uid": "github/odelaneau/shapeit5", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit5", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit5"}, {"uid": "github/odelaneau/shapeit4", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit4", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit4"}, {"uid": "github/odelaneau/GLIMPSE", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/GLIMPSE", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/GLIMPSE"}, {"uid": "github/WGLab/LongGF", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongGF", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongGF"}, {"uid": "github/WGLab/PhenoGPT2", "html_url": "https://rseng.github.io/software/repository/github/WGLab/PhenoGPT2", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/PhenoGPT2"}, {"uid": "github/WGLab/LongReadSum", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongReadSum", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongReadSum"}, {"uid": "github/WGLab/InterVar", "html_url": "https://rseng.github.io/software/repository/github/WGLab/InterVar", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/InterVar"}, {"uid": "github/gokalpcelik/ROHMMCLI", "html_url": "https://rseng.github.io/software/repository/github/gokalpcelik/ROHMMCLI", "api_url": "https://rseng.github.io/software/api/repos/github/gokalpcelik/ROHMMCLI"}, {"uid": "github/moscibrodzka/ipole", "html_url": "https://rseng.github.io/software/repository/github/moscibrodzka/ipole", "api_url": "https://rseng.github.io/software/api/repos/github/moscibrodzka/ipole"}, {"uid": "github/dondi/GRNsight", "html_url": "https://rseng.github.io/software/repository/github/dondi/GRNsight", "api_url": "https://rseng.github.io/software/api/repos/github/dondi/GRNsight"}, {"uid": "github/EXP-code/EXP", "html_url": "https://rseng.github.io/software/repository/github/EXP-code/EXP", "api_url": "https://rseng.github.io/software/api/repos/github/EXP-code/EXP"}, {"uid": "github/khyox/recentrifuge", "html_url": "https://rseng.github.io/software/repository/github/khyox/recentrifuge", "api_url": "https://rseng.github.io/software/api/repos/github/khyox/recentrifuge"}, {"uid": "github/leonzheng2/butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/butterfly"}, {"uid": "github/leonzheng2/efficient-butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/efficient-butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/efficient-butterfly"}, {"uid": "github/pudu-py/pudu", "html_url": "https://rseng.github.io/software/repository/github/pudu-py/pudu", "api_url": "https://rseng.github.io/software/api/repos/github/pudu-py/pudu"}, {"uid": "github/AlexanderBartholomaeus/smORFer", "html_url": "https://rseng.github.io/software/repository/github/AlexanderBartholomaeus/smORFer", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderBartholomaeus/smORFer"}, {"uid": "github/dfguan/purge_dups", "html_url": "https://rseng.github.io/software/repository/github/dfguan/purge_dups", "api_url": "https://rseng.github.io/software/api/repos/github/dfguan/purge_dups"}, {"uid": "github/biod/sambamba", "html_url": "https://rseng.github.io/software/repository/github/biod/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/biod/sambamba"}, {"uid": "github/tschad/pycelp", "html_url": "https://rseng.github.io/software/repository/github/tschad/pycelp", "api_url": "https://rseng.github.io/software/api/repos/github/tschad/pycelp"}, {"uid": "github/wonderful1/CNV-PG", "html_url": "https://rseng.github.io/software/repository/github/wonderful1/CNV-PG", "api_url": "https://rseng.github.io/software/api/repos/github/wonderful1/CNV-PG"}, {"uid": "github/spacepy/spacepy", "html_url": "https://rseng.github.io/software/repository/github/spacepy/spacepy", "api_url": "https://rseng.github.io/software/api/repos/github/spacepy/spacepy"}, {"uid": "github/MSABuschmann/sledgehamr", "html_url": "https://rseng.github.io/software/repository/github/MSABuschmann/sledgehamr", "api_url": "https://rseng.github.io/software/api/repos/github/MSABuschmann/sledgehamr"}, {"uid": "github/algolab/shark", "html_url": "https://rseng.github.io/software/repository/github/algolab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/algolab/shark"}, {"uid": "github/GRIT-RBSim/GRIT", "html_url": "https://rseng.github.io/software/repository/github/GRIT-RBSim/GRIT", "api_url": "https://rseng.github.io/software/api/repos/github/GRIT-RBSim/GRIT"}, {"uid": "github/p-slash/qsonic", "html_url": "https://rseng.github.io/software/repository/github/p-slash/qsonic", "api_url": "https://rseng.github.io/software/api/repos/github/p-slash/qsonic"}, {"uid": "github/AndreyTavleev/DiscVerSt", "html_url": "https://rseng.github.io/software/repository/github/AndreyTavleev/DiscVerSt", "api_url": "https://rseng.github.io/software/api/repos/github/AndreyTavleev/DiscVerSt"}, {"uid": "github/RichardObi/medigan", "html_url": "https://rseng.github.io/software/repository/github/RichardObi/medigan", "api_url": "https://rseng.github.io/software/api/repos/github/RichardObi/medigan"}, {"uid": "github/SMTG-UCL/surfaxe", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/surfaxe", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/surfaxe"}, {"uid": "github/SMTG-UCL/ShakeNBreak", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/ShakeNBreak", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/ShakeNBreak"}, {"uid": "github/elixir-europe/rdmkit", "html_url": "https://rseng.github.io/software/repository/github/elixir-europe/rdmkit", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-europe/rdmkit"}, {"uid": "github/ERA-URBAN/netcdf2littler", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/netcdf2littler", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/netcdf2littler"}, {"uid": "github/ERA-URBAN/fm128_radar", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/fm128_radar", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/fm128_radar"}, {"uid": "github/discsim/frank", "html_url": "https://rseng.github.io/software/repository/github/discsim/frank", "api_url": "https://rseng.github.io/software/api/repos/github/discsim/frank"}, {"uid": "github/TeamLEGWORK/LEGWORK", "html_url": "https://rseng.github.io/software/repository/github/TeamLEGWORK/LEGWORK", "api_url": "https://rseng.github.io/software/api/repos/github/TeamLEGWORK/LEGWORK"}, {"uid": "github/sheinasim/HiFiAdapterFilt", "html_url": "https://rseng.github.io/software/repository/github/sheinasim/HiFiAdapterFilt", "api_url": "https://rseng.github.io/software/api/repos/github/sheinasim/HiFiAdapterFilt"}, {"uid": "github/YSOVAR/YSOVAR", "html_url": "https://rseng.github.io/software/repository/github/YSOVAR/YSOVAR", "api_url": "https://rseng.github.io/software/api/repos/github/YSOVAR/YSOVAR"}, {"uid": "github/pelahi/VELOCIraptor-STF", "html_url": "https://rseng.github.io/software/repository/github/pelahi/VELOCIraptor-STF", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/VELOCIraptor-STF"}, {"uid": "github/pelahi/TreeFrog", "html_url": "https://rseng.github.io/software/repository/github/pelahi/TreeFrog", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/TreeFrog"}, {"uid": "github/dolaver/calsagos", "html_url": "https://rseng.github.io/software/repository/github/dolaver/calsagos", "api_url": "https://rseng.github.io/software/api/repos/github/dolaver/calsagos"}, {"uid": "github/mthorrell/gbnet", "html_url": "https://rseng.github.io/software/repository/github/mthorrell/gbnet", "api_url": "https://rseng.github.io/software/api/repos/github/mthorrell/gbnet"}, {"uid": "github/valentineap/pyprop8", "html_url": "https://rseng.github.io/software/repository/github/valentineap/pyprop8", "api_url": "https://rseng.github.io/software/api/repos/github/valentineap/pyprop8"}, {"uid": "github/jfoster17/extinction-distances", "html_url": "https://rseng.github.io/software/repository/github/jfoster17/extinction-distances", "api_url": "https://rseng.github.io/software/api/repos/github/jfoster17/extinction-distances"}, {"uid": "github/cumbof/honto", "html_url": "https://rseng.github.io/software/repository/github/cumbof/honto", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/honto"}, {"uid": "github/cumbof/MetaSBT-DBs", "html_url": "https://rseng.github.io/software/repository/github/cumbof/MetaSBT-DBs", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/MetaSBT-DBs"}, {"uid": "github/anuwu/DAGN-Blindtest", "html_url": "https://rseng.github.io/software/repository/github/anuwu/DAGN-Blindtest", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/DAGN-Blindtest"}, {"uid": "github/anuwu/GOTHIC", "html_url": "https://rseng.github.io/software/repository/github/anuwu/GOTHIC", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/GOTHIC"}, {"uid": "github/CITCOM-project/CausalTestingFramework", "html_url": "https://rseng.github.io/software/repository/github/CITCOM-project/CausalTestingFramework", "api_url": "https://rseng.github.io/software/api/repos/github/CITCOM-project/CausalTestingFramework"}, {"uid": "github/NSAPH-Software/CRE", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/CRE", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/CRE"}, {"uid": "github/NSAPH-Software/GPCERF", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/GPCERF", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/GPCERF"}, {"uid": "github/v-morello/iqrm", "html_url": "https://rseng.github.io/software/repository/github/v-morello/iqrm", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/iqrm"}, {"uid": "github/v-morello/riptide", "html_url": "https://rseng.github.io/software/repository/github/v-morello/riptide", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/riptide"}, {"uid": "github/v-morello/clfd", "html_url": "https://rseng.github.io/software/repository/github/v-morello/clfd", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/clfd"}, {"uid": "github/wangsiwei2010/FPMVS-CAG", "html_url": "https://rseng.github.io/software/repository/github/wangsiwei2010/FPMVS-CAG", "api_url": "https://rseng.github.io/software/api/repos/github/wangsiwei2010/FPMVS-CAG"}, {"uid": "github/arviz-devs/arviz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/arviz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/arviz"}, {"uid": "github/arviz-devs/preliz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/preliz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/preliz"}, {"uid": "github/tomlouden/spiderman", "html_url": "https://rseng.github.io/software/repository/github/tomlouden/spiderman", "api_url": "https://rseng.github.io/software/api/repos/github/tomlouden/spiderman"}, {"uid": "github/kyleaoman/martini", "html_url": "https://rseng.github.io/software/repository/github/kyleaoman/martini", "api_url": "https://rseng.github.io/software/api/repos/github/kyleaoman/martini"}, {"uid": "github/JD2112/methylr", "html_url": "https://rseng.github.io/software/repository/github/JD2112/methylr", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/methylr"}, {"uid": "github/JD2112/TwistMethylFlow", "html_url": "https://rseng.github.io/software/repository/github/JD2112/TwistMethylFlow", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/TwistMethylFlow"}, {"uid": "github/gwpy/gwpy", "html_url": "https://rseng.github.io/software/repository/github/gwpy/gwpy", "api_url": "https://rseng.github.io/software/api/repos/github/gwpy/gwpy"}, {"uid": "github/lmcinnes/umap", "html_url": "https://rseng.github.io/software/repository/github/lmcinnes/umap", "api_url": "https://rseng.github.io/software/api/repos/github/lmcinnes/umap"}, {"uid": "github/seung-lab/FlyWirePaper", "html_url": "https://rseng.github.io/software/repository/github/seung-lab/FlyWirePaper", "api_url": "https://rseng.github.io/software/api/repos/github/seung-lab/FlyWirePaper"}, {"uid": "github/algo-cancer/CAMMiQ", "html_url": "https://rseng.github.io/software/repository/github/algo-cancer/CAMMiQ", "api_url": "https://rseng.github.io/software/api/repos/github/algo-cancer/CAMMiQ"}, {"uid": "github/JuliaGeo/CFTime.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeo/CFTime.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeo/CFTime.jl"}, {"uid": "github/marcocalza89/GrayHawk", "html_url": "https://rseng.github.io/software/repository/github/marcocalza89/GrayHawk", "api_url": "https://rseng.github.io/software/api/repos/github/marcocalza89/GrayHawk"}, {"uid": "github/damienmarsic/Parent-map", "html_url": "https://rseng.github.io/software/repository/github/damienmarsic/Parent-map", "api_url": "https://rseng.github.io/software/api/repos/github/damienmarsic/Parent-map"}, {"uid": "github/kbarbary/nestle", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/nestle", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/nestle"}, {"uid": "github/kbarbary/sep", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/sep", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/sep"}, {"uid": "github/kbarbary/extinction", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/extinction", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/extinction"}, {"uid": "github/sensein/etelemetry-client", "html_url": "https://rseng.github.io/software/repository/github/sensein/etelemetry-client", "api_url": "https://rseng.github.io/software/api/repos/github/sensein/etelemetry-client"}, {"uid": "github/threeML/threeML", "html_url": "https://rseng.github.io/software/repository/github/threeML/threeML", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/threeML"}, {"uid": "github/threeML/astromodels", "html_url": "https://rseng.github.io/software/repository/github/threeML/astromodels", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/astromodels"}, {"uid": "github/lrnv/cort", "html_url": "https://rseng.github.io/software/repository/github/lrnv/cort", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/cort"}, {"uid": "github/lrnv/Copulas.jl", "html_url": "https://rseng.github.io/software/repository/github/lrnv/Copulas.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/Copulas.jl"}, {"uid": "github/Ohervet/Bjet_MCMC", "html_url": "https://rseng.github.io/software/repository/github/Ohervet/Bjet_MCMC", "api_url": "https://rseng.github.io/software/api/repos/github/Ohervet/Bjet_MCMC"}, {"uid": "github/gausspy/gausspy", "html_url": "https://rseng.github.io/software/repository/github/gausspy/gausspy", "api_url": "https://rseng.github.io/software/api/repos/github/gausspy/gausspy"}, {"uid": "github/FunctionalUrology/MLcps", "html_url": "https://rseng.github.io/software/repository/github/FunctionalUrology/MLcps", "api_url": "https://rseng.github.io/software/api/repos/github/FunctionalUrology/MLcps"}, {"uid": "github/kowallus/mbgc", "html_url": "https://rseng.github.io/software/repository/github/kowallus/mbgc", "api_url": "https://rseng.github.io/software/api/repos/github/kowallus/mbgc"}, {"uid": "github/xiaotiand/FunFor", "html_url": "https://rseng.github.io/software/repository/github/xiaotiand/FunFor", "api_url": "https://rseng.github.io/software/api/repos/github/xiaotiand/FunFor"}, {"uid": "github/andresmegias/gildas-class-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/gildas-class-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/gildas-class-python"}, {"uid": "github/andresmegias/richvalues", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/richvalues", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/richvalues"}, {"uid": "github/andresmegias/radex-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/radex-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/radex-python"}, {"uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", "html_url": "https://rseng.github.io/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", "api_url": "https://rseng.github.io/software/api/repos/github/teamPSG/kNN_Sleep_Scorer_kNNSS"}, {"uid": "github/jonbmartin/pulpy", "html_url": "https://rseng.github.io/software/repository/github/jonbmartin/pulpy", "api_url": "https://rseng.github.io/software/api/repos/github/jonbmartin/pulpy"}, {"uid": "github/kundajelab/phantompeakqualtools", "html_url": "https://rseng.github.io/software/repository/github/kundajelab/phantompeakqualtools", "api_url": "https://rseng.github.io/software/api/repos/github/kundajelab/phantompeakqualtools"}, {"uid": "github/rjsmethurst/snitch", "html_url": "https://rseng.github.io/software/repository/github/rjsmethurst/snitch", "api_url": "https://rseng.github.io/software/api/repos/github/rjsmethurst/snitch"}, {"uid": "github/AMSSwanglab/RE-GOA", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/RE-GOA", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/RE-GOA"}, {"uid": "github/AMSSwanglab/SpecVar", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/SpecVar", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/SpecVar"}, {"uid": "github/multiwavelength/gleam", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/gleam", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/gleam"}, {"uid": "github/multiwavelength/redshifts", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/redshifts", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/redshifts"}, {"uid": "github/pymedphys/pymedphys", "html_url": "https://rseng.github.io/software/repository/github/pymedphys/pymedphys", "api_url": "https://rseng.github.io/software/api/repos/github/pymedphys/pymedphys"}, {"uid": "github/podondra/bayesian-sznet", "html_url": "https://rseng.github.io/software/repository/github/podondra/bayesian-sznet", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/bayesian-sznet"}, {"uid": "github/podondra/eidein", "html_url": "https://rseng.github.io/software/repository/github/podondra/eidein", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/eidein"}, {"uid": "github/BenMql/coral", "html_url": "https://rseng.github.io/software/repository/github/BenMql/coral", "api_url": "https://rseng.github.io/software/api/repos/github/BenMql/coral"}, {"uid": "github/NextGenCMB/lensitbiases", "html_url": "https://rseng.github.io/software/repository/github/NextGenCMB/lensitbiases", "api_url": "https://rseng.github.io/software/api/repos/github/NextGenCMB/lensitbiases"}, {"uid": "github/ewels/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/ewels/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/ewels/MultiQC"}, {"uid": "github/JianjunTan-Beijing/LPI-CSFFR", "html_url": "https://rseng.github.io/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", "api_url": "https://rseng.github.io/software/api/repos/github/JianjunTan-Beijing/LPI-CSFFR"}, {"uid": "github/mdlreyes/void-dwarf-analysis", "html_url": "https://rseng.github.io/software/repository/github/mdlreyes/void-dwarf-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/mdlreyes/void-dwarf-analysis"}, {"uid": "github/ulelab/ultraplex", "html_url": "https://rseng.github.io/software/repository/github/ulelab/ultraplex", "api_url": "https://rseng.github.io/software/api/repos/github/ulelab/ultraplex"}, {"uid": "github/childmindresearch/wristpy", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/wristpy", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/wristpy"}, {"uid": "github/childmindresearch/actisleep-tracker", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/actisleep-tracker", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/actisleep-tracker"}, {"uid": "github/apertif/apercal", "html_url": "https://rseng.github.io/software/repository/github/apertif/apercal", "api_url": "https://rseng.github.io/software/api/repos/github/apertif/apercal"}, {"uid": "github/facebookresearch/segment-anything", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/segment-anything", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/segment-anything"}, {"uid": "github/facebookresearch/faiss", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/faiss", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/faiss"}, {"uid": "github/daissi/thesias", "html_url": "https://rseng.github.io/software/repository/github/daissi/thesias", "api_url": "https://rseng.github.io/software/api/repos/github/daissi/thesias"}, {"uid": "github/beebdev/HARU", "html_url": "https://rseng.github.io/software/repository/github/beebdev/HARU", "api_url": "https://rseng.github.io/software/api/repos/github/beebdev/HARU"}, {"uid": "github/cbg-ethz/LolliPop", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/LolliPop", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/LolliPop"}, {"uid": "github/cbg-ethz/smallgenomeutilities", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/smallgenomeutilities", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/smallgenomeutilities"}, {"uid": "github/cbg-ethz/V-pipe", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/V-pipe", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/V-pipe"}, {"uid": "github/cbg-ethz/shorah", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/shorah", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/shorah"}, {"uid": "github/cbg-ethz/PredictHaplo", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/PredictHaplo", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/PredictHaplo"}, {"uid": "github/DyHealthNet/NApy", "html_url": "https://rseng.github.io/software/repository/github/DyHealthNet/NApy", "api_url": "https://rseng.github.io/software/api/repos/github/DyHealthNet/NApy"}, {"uid": "github/djgroen/MPWide", "html_url": "https://rseng.github.io/software/repository/github/djgroen/MPWide", "api_url": "https://rseng.github.io/software/api/repos/github/djgroen/MPWide"}, {"uid": "github/shaelebrown/TDApplied", "html_url": "https://rseng.github.io/software/repository/github/shaelebrown/TDApplied", "api_url": "https://rseng.github.io/software/api/repos/github/shaelebrown/TDApplied"}, {"uid": "github/vmmunoza/nuHawkHunter", "html_url": "https://rseng.github.io/software/repository/github/vmmunoza/nuHawkHunter", "api_url": "https://rseng.github.io/software/api/repos/github/vmmunoza/nuHawkHunter"}, {"uid": "github/exobssim/rapoc-public", "html_url": "https://rseng.github.io/software/repository/github/exobssim/rapoc-public", "api_url": "https://rseng.github.io/software/api/repos/github/exobssim/rapoc-public"}, {"uid": "github/mivp/encube", "html_url": "https://rseng.github.io/software/repository/github/mivp/encube", "api_url": "https://rseng.github.io/software/api/repos/github/mivp/encube"}, {"uid": "github/openCARP-org/FACILE-RS", "html_url": "https://rseng.github.io/software/repository/github/openCARP-org/FACILE-RS", "api_url": "https://rseng.github.io/software/api/repos/github/openCARP-org/FACILE-RS"}, {"uid": "github/UUDigitalHumanitieslab/texcavator", "html_url": "https://rseng.github.io/software/repository/github/UUDigitalHumanitieslab/texcavator", "api_url": "https://rseng.github.io/software/api/repos/github/UUDigitalHumanitieslab/texcavator"}, {"uid": "github/BenitoFar/NestedComBat", "html_url": "https://rseng.github.io/software/repository/github/BenitoFar/NestedComBat", "api_url": "https://rseng.github.io/software/api/repos/github/BenitoFar/NestedComBat"}, {"uid": "github/abaleato/CARDiAC", "html_url": "https://rseng.github.io/software/repository/github/abaleato/CARDiAC", "api_url": "https://rseng.github.io/software/api/repos/github/abaleato/CARDiAC"}, {"uid": "github/gmarcais/Quorum", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Quorum", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Quorum"}, {"uid": "github/gmarcais/Jellyfish", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Jellyfish", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Jellyfish"}, {"uid": "github/davemlz/eemont", "html_url": "https://rseng.github.io/software/repository/github/davemlz/eemont", "api_url": "https://rseng.github.io/software/api/repos/github/davemlz/eemont"}, {"uid": "github/bpp/bpp", "html_url": "https://rseng.github.io/software/repository/github/bpp/bpp", "api_url": "https://rseng.github.io/software/api/repos/github/bpp/bpp"}, {"uid": "github/trevisanj/PFANT", "html_url": "https://rseng.github.io/software/repository/github/trevisanj/PFANT", "api_url": "https://rseng.github.io/software/api/repos/github/trevisanj/PFANT"}, {"uid": "github/cadet/CADET-Core", "html_url": "https://rseng.github.io/software/repository/github/cadet/CADET-Core", "api_url": "https://rseng.github.io/software/api/repos/github/cadet/CADET-Core"}, {"uid": "github/xoopR/set6", "html_url": "https://rseng.github.io/software/repository/github/xoopR/set6", "api_url": "https://rseng.github.io/software/api/repos/github/xoopR/set6"}, {"uid": "github/LDEO-CREW/Pythonic-DISORT", "html_url": "https://rseng.github.io/software/repository/github/LDEO-CREW/Pythonic-DISORT", "api_url": "https://rseng.github.io/software/api/repos/github/LDEO-CREW/Pythonic-DISORT"}, {"uid": "github/phillippro/pexo", "html_url": "https://rseng.github.io/software/repository/github/phillippro/pexo", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/pexo"}, {"uid": "github/phillippro/agatha", "html_url": "https://rseng.github.io/software/repository/github/phillippro/agatha", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/agatha"}, {"uid": "github/tupui/scipy", "html_url": "https://rseng.github.io/software/repository/github/tupui/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/tupui/scipy"}, {"uid": "github/klho/FLAM", "html_url": "https://rseng.github.io/software/repository/github/klho/FLAM", "api_url": "https://rseng.github.io/software/api/repos/github/klho/FLAM"}, {"uid": "github/tlancian/bio_cs", "html_url": "https://rseng.github.io/software/repository/github/tlancian/bio_cs", "api_url": "https://rseng.github.io/software/api/repos/github/tlancian/bio_cs"}, {"uid": "github/realfastvla/rfpipe", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/rfpipe", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/rfpipe"}, {"uid": "github/realfastvla/realfast", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/realfast", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/realfast"}, {"uid": "github/Ouranosinc/xclim", "html_url": "https://rseng.github.io/software/repository/github/Ouranosinc/xclim", "api_url": "https://rseng.github.io/software/api/repos/github/Ouranosinc/xclim"}, {"uid": "github/openmsi/openmsistream", "html_url": "https://rseng.github.io/software/repository/github/openmsi/openmsistream", "api_url": "https://rseng.github.io/software/api/repos/github/openmsi/openmsistream"}, {"uid": "github/bayesn/bayesn", "html_url": "https://rseng.github.io/software/repository/github/bayesn/bayesn", "api_url": "https://rseng.github.io/software/api/repos/github/bayesn/bayesn"}, {"uid": "github/greendw/AntabGMVA", "html_url": "https://rseng.github.io/software/repository/github/greendw/AntabGMVA", "api_url": "https://rseng.github.io/software/api/repos/github/greendw/AntabGMVA"}, {"uid": "github/KeplerGO/kadenza", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/kadenza", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/kadenza"}, {"uid": "github/KeplerGO/PyKE", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/PyKE", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/PyKE"}, {"uid": "github/KeplerGO/k2mosaic", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/k2mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/k2mosaic"}, {"uid": "github/KeplerGO/K2fov", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/K2fov", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/K2fov"}, {"uid": "github/bluesky/bluesky", "html_url": "https://rseng.github.io/software/repository/github/bluesky/bluesky", "api_url": "https://rseng.github.io/software/api/repos/github/bluesky/bluesky"}, {"uid": "github/nathandecaux/labelprop", "html_url": "https://rseng.github.io/software/repository/github/nathandecaux/labelprop", "api_url": "https://rseng.github.io/software/api/repos/github/nathandecaux/labelprop"}, {"uid": "github/veg/hivtrace", "html_url": "https://rseng.github.io/software/repository/github/veg/hivtrace", "api_url": "https://rseng.github.io/software/api/repos/github/veg/hivtrace"}, {"uid": "github/veg/tn93", "html_url": "https://rseng.github.io/software/repository/github/veg/tn93", "api_url": "https://rseng.github.io/software/api/repos/github/veg/tn93"}, {"uid": "github/ynop/audiomate", "html_url": "https://rseng.github.io/software/repository/github/ynop/audiomate", "api_url": "https://rseng.github.io/software/api/repos/github/ynop/audiomate"}, {"uid": "github/instituteofmechanics/paraqus", "html_url": "https://rseng.github.io/software/repository/github/instituteofmechanics/paraqus", "api_url": "https://rseng.github.io/software/api/repos/github/instituteofmechanics/paraqus"}, {"uid": "github/floodlight-sports/floodlight", "html_url": "https://rseng.github.io/software/repository/github/floodlight-sports/floodlight", "api_url": "https://rseng.github.io/software/api/repos/github/floodlight-sports/floodlight"}, {"uid": "github/macs3-project/MACS", "html_url": "https://rseng.github.io/software/repository/github/macs3-project/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/macs3-project/MACS"}, {"uid": "github/s-abbas/robnptests", "html_url": "https://rseng.github.io/software/repository/github/s-abbas/robnptests", "api_url": "https://rseng.github.io/software/api/repos/github/s-abbas/robnptests"}, {"uid": "github/eWaterCycle/grpc4bmi", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/grpc4bmi", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/grpc4bmi"}, {"uid": "github/eWaterCycle/setup-singularity", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-singularity", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-singularity"}, {"uid": "github/eWaterCycle/jupyterlab_thredds", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/jupyterlab_thredds", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/jupyterlab_thredds"}, {"uid": "github/eWaterCycle/Cesium-NcWMS", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/Cesium-NcWMS", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/Cesium-NcWMS"}, {"uid": "github/eWaterCycle/experiment-launcher", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/experiment-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/experiment-launcher"}, {"uid": "github/eWaterCycle/ewatercycle", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/ewatercycle", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/ewatercycle"}, {"uid": "github/eWaterCycle/eWaterleaf", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/eWaterleaf", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/eWaterleaf"}, {"uid": "github/eWaterCycle/setup-grpc", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-grpc"}, {"uid": "github/EliseJ/superabc", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/superabc", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/superabc"}, {"uid": "github/EliseJ/astroABC", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/astroABC", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/astroABC"}, {"uid": "github/jakeret/abcpmc", "html_url": "https://rseng.github.io/software/repository/github/jakeret/abcpmc", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/abcpmc"}, {"uid": "github/jakeret/tf_unet", "html_url": "https://rseng.github.io/software/repository/github/jakeret/tf_unet", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/tf_unet"}, {"uid": "github/czbiohub/cerebra", "html_url": "https://rseng.github.io/software/repository/github/czbiohub/cerebra", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub/cerebra"}, {"uid": "github/bricoletc/delfies", "html_url": "https://rseng.github.io/software/repository/github/bricoletc/delfies", "api_url": "https://rseng.github.io/software/api/repos/github/bricoletc/delfies"}, {"uid": "github/myfang2021/VIPPID", "html_url": "https://rseng.github.io/software/repository/github/myfang2021/VIPPID", "api_url": "https://rseng.github.io/software/api/repos/github/myfang2021/VIPPID"}, {"uid": "github/lantunes/cellpylib", "html_url": "https://rseng.github.io/software/repository/github/lantunes/cellpylib", "api_url": "https://rseng.github.io/software/api/repos/github/lantunes/cellpylib"}, {"uid": "github/mtsch/Ripserer.jl", "html_url": "https://rseng.github.io/software/repository/github/mtsch/Ripserer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mtsch/Ripserer.jl"}, {"uid": "github/astronomical-data-processing/RAPP", "html_url": "https://rseng.github.io/software/repository/github/astronomical-data-processing/RAPP", "api_url": "https://rseng.github.io/software/api/repos/github/astronomical-data-processing/RAPP"}, {"uid": "github/vatlab/sos-notebook", "html_url": "https://rseng.github.io/software/repository/github/vatlab/sos-notebook", "api_url": "https://rseng.github.io/software/api/repos/github/vatlab/sos-notebook"}, {"uid": "github/cgre-aachen/gemgis", "html_url": "https://rseng.github.io/software/repository/github/cgre-aachen/gemgis", "api_url": "https://rseng.github.io/software/api/repos/github/cgre-aachen/gemgis"}, {"uid": "github/muLAn-project/muLAn", "html_url": "https://rseng.github.io/software/repository/github/muLAn-project/muLAn", "api_url": "https://rseng.github.io/software/api/repos/github/muLAn-project/muLAn"}, {"uid": "github/dmey/synthia", "html_url": "https://rseng.github.io/software/repository/github/dmey/synthia", "api_url": "https://rseng.github.io/software/api/repos/github/dmey/synthia"}, {"uid": "github/kblin/ncbi-acc-download", "html_url": "https://rseng.github.io/software/repository/github/kblin/ncbi-acc-download", "api_url": "https://rseng.github.io/software/api/repos/github/kblin/ncbi-acc-download"}, {"uid": "github/HillLab/SomaticSiMu", "html_url": "https://rseng.github.io/software/repository/github/HillLab/SomaticSiMu", "api_url": "https://rseng.github.io/software/api/repos/github/HillLab/SomaticSiMu"}, {"uid": "github/SMTG-Bham/ThermoParser", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/ThermoParser", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/ThermoParser"}, {"uid": "github/SMTG-Bham/doped", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/doped", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/doped"}, {"uid": "github/cuDisc/cuDisc", "html_url": "https://rseng.github.io/software/repository/github/cuDisc/cuDisc", "api_url": "https://rseng.github.io/software/api/repos/github/cuDisc/cuDisc"}, {"uid": "github/heliopython/heliopy", "html_url": "https://rseng.github.io/software/repository/github/heliopython/heliopy", "api_url": "https://rseng.github.io/software/api/repos/github/heliopython/heliopy"}, {"uid": "github/mtazzari/galario", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/galario", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/galario"}, {"uid": "github/mtazzari/uvplot", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/uvplot", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/uvplot"}, {"uid": "github/mtazzari/binary", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/binary", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/binary"}, {"uid": "github/LangeLab/SQuAPP", "html_url": "https://rseng.github.io/software/repository/github/LangeLab/SQuAPP", "api_url": "https://rseng.github.io/software/api/repos/github/LangeLab/SQuAPP"}, {"uid": "github/heracles-ec/heracles", "html_url": "https://rseng.github.io/software/repository/github/heracles-ec/heracles", "api_url": "https://rseng.github.io/software/api/repos/github/heracles-ec/heracles"}, {"uid": "github/mattyowl/fitScalingRelation", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/fitScalingRelation", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/fitScalingRelation"}, {"uid": "github/mattyowl/astLib", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/astLib", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/astLib"}, {"uid": "github/MichaelCretignier/Rassine_public", "html_url": "https://rseng.github.io/software/repository/github/MichaelCretignier/Rassine_public", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelCretignier/Rassine_public"}, {"uid": "github/chembl/EnsembleFlex", "html_url": "https://rseng.github.io/software/repository/github/chembl/EnsembleFlex", "api_url": "https://rseng.github.io/software/api/repos/github/chembl/EnsembleFlex"}, {"uid": "github/siavash-saki/tesspy", "html_url": "https://rseng.github.io/software/repository/github/siavash-saki/tesspy", "api_url": "https://rseng.github.io/software/api/repos/github/siavash-saki/tesspy"}, {"uid": "github/comprna/reorientexpress", "html_url": "https://rseng.github.io/software/repository/github/comprna/reorientexpress", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/reorientexpress"}, {"uid": "github/comprna/SUPPA", "html_url": "https://rseng.github.io/software/repository/github/comprna/SUPPA", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/SUPPA"}, {"uid": "github/fAndreuzzi/BisPy", "html_url": "https://rseng.github.io/software/repository/github/fAndreuzzi/BisPy", "api_url": "https://rseng.github.io/software/api/repos/github/fAndreuzzi/BisPy"}, {"uid": "github/IMS-MAXIMS/openMAXIMS", "html_url": "https://rseng.github.io/software/repository/github/IMS-MAXIMS/openMAXIMS", "api_url": "https://rseng.github.io/software/api/repos/github/IMS-MAXIMS/openMAXIMS"}, {"uid": "github/stefanhiemer/topoptlab", "html_url": "https://rseng.github.io/software/repository/github/stefanhiemer/topoptlab", "api_url": "https://rseng.github.io/software/api/repos/github/stefanhiemer/topoptlab"}, {"uid": "github/bwa-mem2/bwa-mem2", "html_url": "https://rseng.github.io/software/repository/github/bwa-mem2/bwa-mem2", "api_url": "https://rseng.github.io/software/api/repos/github/bwa-mem2/bwa-mem2"}, {"uid": "github/mattevs24/reyna", "html_url": "https://rseng.github.io/software/repository/github/mattevs24/reyna", "api_url": "https://rseng.github.io/software/api/repos/github/mattevs24/reyna"}, {"uid": "github/simon-prunet/defringe", "html_url": "https://rseng.github.io/software/repository/github/simon-prunet/defringe", "api_url": "https://rseng.github.io/software/api/repos/github/simon-prunet/defringe"}, {"uid": "github/Ecogenomics/GTDBTk", "html_url": "https://rseng.github.io/software/repository/github/Ecogenomics/GTDBTk", "api_url": "https://rseng.github.io/software/api/repos/github/Ecogenomics/GTDBTk"}, {"uid": "github/cmoestl/3DCORE", "html_url": "https://rseng.github.io/software/repository/github/cmoestl/3DCORE", "api_url": "https://rseng.github.io/software/api/repos/github/cmoestl/3DCORE"}, {"uid": "github/Gaius-Augustus/BRAKER", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/BRAKER", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/BRAKER"}, {"uid": "github/Gaius-Augustus/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/Tiberius"}, {"uid": "github/Gaius-Augustus/GALBA", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/GALBA", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/GALBA"}, {"uid": "github/raufs/skDER", "html_url": "https://rseng.github.io/software/repository/github/raufs/skDER", "api_url": "https://rseng.github.io/software/api/repos/github/raufs/skDER"}, {"uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", "html_url": "https://rseng.github.io/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", "api_url": "https://rseng.github.io/software/api/repos/github/BDI-pathogens/OpenABM-Covid19-model-paper"}, {"uid": "github/ejmackrell/tidyproteomics-interactive", "html_url": "https://rseng.github.io/software/repository/github/ejmackrell/tidyproteomics-interactive", "api_url": "https://rseng.github.io/software/api/repos/github/ejmackrell/tidyproteomics-interactive"}, {"uid": "github/ajwheeler/korg.jl", "html_url": "https://rseng.github.io/software/repository/github/ajwheeler/korg.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ajwheeler/korg.jl"}, {"uid": "github/AndreaCaldiroli/ATES-Code", "html_url": "https://rseng.github.io/software/repository/github/AndreaCaldiroli/ATES-Code", "api_url": "https://rseng.github.io/software/api/repos/github/AndreaCaldiroli/ATES-Code"}, {"uid": "github/BioGenies/AMPBenchmark", "html_url": "https://rseng.github.io/software/repository/github/BioGenies/AMPBenchmark", "api_url": "https://rseng.github.io/software/api/repos/github/BioGenies/AMPBenchmark"}, {"uid": "github/elliohow/fMRI_ROI_Analysis_Tool", "html_url": "https://rseng.github.io/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", "api_url": "https://rseng.github.io/software/api/repos/github/elliohow/fMRI_ROI_Analysis_Tool"}, {"uid": "github/chaoliu-cl/textAnnotatoR", "html_url": "https://rseng.github.io/software/repository/github/chaoliu-cl/textAnnotatoR", "api_url": "https://rseng.github.io/software/api/repos/github/chaoliu-cl/textAnnotatoR"}, {"uid": "github/cau-se/ARCHES-PiCar-X", "html_url": "https://rseng.github.io/software/repository/github/cau-se/ARCHES-PiCar-X", "api_url": "https://rseng.github.io/software/api/repos/github/cau-se/ARCHES-PiCar-X"}, {"uid": "github/Exo-MerCat/Exo-MerCat", "html_url": "https://rseng.github.io/software/repository/github/Exo-MerCat/Exo-MerCat", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-MerCat/Exo-MerCat"}, {"uid": "github/LQYoLH/CnnCrispr", "html_url": "https://rseng.github.io/software/repository/github/LQYoLH/CnnCrispr", "api_url": "https://rseng.github.io/software/api/repos/github/LQYoLH/CnnCrispr"}, {"uid": "github/poldracklab/nitransforms", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/nitransforms", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/nitransforms"}, {"uid": "github/poldracklab/mriqc", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/mriqc", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/mriqc"}, {"uid": "github/tacazares/SeedMatchR", "html_url": "https://rseng.github.io/software/repository/github/tacazares/SeedMatchR", "api_url": "https://rseng.github.io/software/api/repos/github/tacazares/SeedMatchR"}, {"uid": "github/wadpac/GGIR", "html_url": "https://rseng.github.io/software/repository/github/wadpac/GGIR", "api_url": "https://rseng.github.io/software/api/repos/github/wadpac/GGIR"}, {"uid": "github/Merck/pkglite", "html_url": "https://rseng.github.io/software/repository/github/Merck/pkglite", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/pkglite"}, {"uid": "github/Merck/BioPhi", "html_url": "https://rseng.github.io/software/repository/github/Merck/BioPhi", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/BioPhi"}, {"uid": "github/3d-pli/fastpli", "html_url": "https://rseng.github.io/software/repository/github/3d-pli/fastpli", "api_url": "https://rseng.github.io/software/api/repos/github/3d-pli/fastpli"}, {"uid": "github/cupy/cupy", "html_url": "https://rseng.github.io/software/repository/github/cupy/cupy", "api_url": "https://rseng.github.io/software/api/repos/github/cupy/cupy"}, {"uid": "github/APGG-Lab/APGG", "html_url": "https://rseng.github.io/software/repository/github/APGG-Lab/APGG", "api_url": "https://rseng.github.io/software/api/repos/github/APGG-Lab/APGG"}, {"uid": "github/SunilAnandatheertha/PXO", "html_url": "https://rseng.github.io/software/repository/github/SunilAnandatheertha/PXO", "api_url": "https://rseng.github.io/software/api/repos/github/SunilAnandatheertha/PXO"}, {"uid": "github/gevaertlab/DUNE", "html_url": "https://rseng.github.io/software/repository/github/gevaertlab/DUNE", "api_url": "https://rseng.github.io/software/api/repos/github/gevaertlab/DUNE"}, {"uid": "github/dipto4/falcon_dm", "html_url": "https://rseng.github.io/software/repository/github/dipto4/falcon_dm", "api_url": "https://rseng.github.io/software/api/repos/github/dipto4/falcon_dm"}, {"uid": "github/ruiying-ocean/cgeniepy", "html_url": "https://rseng.github.io/software/repository/github/ruiying-ocean/cgeniepy", "api_url": "https://rseng.github.io/software/api/repos/github/ruiying-ocean/cgeniepy"}, {"uid": "github/seshnadathur/Revolver", "html_url": "https://rseng.github.io/software/repository/github/seshnadathur/Revolver", "api_url": "https://rseng.github.io/software/api/repos/github/seshnadathur/Revolver"}, {"uid": "github/mgckind/SparsePz", "html_url": "https://rseng.github.io/software/repository/github/mgckind/SparsePz", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/SparsePz"}, {"uid": "github/mgckind/easyaccess", "html_url": "https://rseng.github.io/software/repository/github/mgckind/easyaccess", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/easyaccess"}, {"uid": "github/noraeisner/LATTE", "html_url": "https://rseng.github.io/software/repository/github/noraeisner/LATTE", "api_url": "https://rseng.github.io/software/api/repos/github/noraeisner/LATTE"}, {"uid": "github/avapolzin/spike", "html_url": "https://rseng.github.io/software/repository/github/avapolzin/spike", "api_url": "https://rseng.github.io/software/api/repos/github/avapolzin/spike"}, {"uid": "github/RamanLab/iCOMIC", "html_url": "https://rseng.github.io/software/repository/github/RamanLab/iCOMIC", "api_url": "https://rseng.github.io/software/api/repos/github/RamanLab/iCOMIC"}, {"uid": "github/mrirecon/bart", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/bart", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/bart"}, {"uid": "github/mrirecon/view", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/view", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/view"}, {"uid": "github/shenwei356/unikmer", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/unikmer", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/unikmer"}, {"uid": "github/shenwei356/kmcp", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/kmcp", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/kmcp"}, {"uid": "github/shenwei356/csvtk", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/csvtk", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/csvtk"}, {"uid": "github/shenwei356/seqkit", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/seqkit", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/seqkit"}, {"uid": "github/shenwei356/LexicMap", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/LexicMap", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/LexicMap"}, {"uid": "github/autotwin/automesh", "html_url": "https://rseng.github.io/software/repository/github/autotwin/automesh", "api_url": "https://rseng.github.io/software/api/repos/github/autotwin/automesh"}, {"uid": "github/JoschaJ/mockFRBhosts", "html_url": "https://rseng.github.io/software/repository/github/JoschaJ/mockFRBhosts", "api_url": "https://rseng.github.io/software/api/repos/github/JoschaJ/mockFRBhosts"}, {"uid": "github/biofold/ddgun", "html_url": "https://rseng.github.io/software/repository/github/biofold/ddgun", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/ddgun"}, {"uid": "github/biofold/PhD-SNPg", "html_url": "https://rseng.github.io/software/repository/github/biofold/PhD-SNPg", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/PhD-SNPg"}, {"uid": "github/sonoUnoTeam/sonoUno-desktop", "html_url": "https://rseng.github.io/software/repository/github/sonoUnoTeam/sonoUno-desktop", "api_url": "https://rseng.github.io/software/api/repos/github/sonoUnoTeam/sonoUno-desktop"}, {"uid": "github/maickrau/GraphAligner", "html_url": "https://rseng.github.io/software/repository/github/maickrau/GraphAligner", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/GraphAligner"}, {"uid": "github/maickrau/MBG", "html_url": "https://rseng.github.io/software/repository/github/maickrau/MBG", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/MBG"}, {"uid": "github/vpc-ccg/calib", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/calib", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/calib"}, {"uid": "github/vpc-ccg/svict", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/svict", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/svict"}, {"uid": "github/vpc-ccg/genion", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/genion", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/genion"}, {"uid": "github/olivecha/guitarsounds", "html_url": "https://rseng.github.io/software/repository/github/olivecha/guitarsounds", "api_url": "https://rseng.github.io/software/api/repos/github/olivecha/guitarsounds"}, {"uid": "github/karel-brinda/ococo", "html_url": "https://rseng.github.io/software/repository/github/karel-brinda/ococo", "api_url": "https://rseng.github.io/software/api/repos/github/karel-brinda/ococo"}, {"uid": "github/JoshSchramm94/validateHOT", "html_url": "https://rseng.github.io/software/repository/github/JoshSchramm94/validateHOT", "api_url": "https://rseng.github.io/software/api/repos/github/JoshSchramm94/validateHOT"}, {"uid": "github/m2aia/pym2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/pym2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/pym2aia"}, {"uid": "github/m2aia/m2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/m2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/m2aia"}, {"uid": "github/MREYE-LUMC/ZOSPy", "html_url": "https://rseng.github.io/software/repository/github/MREYE-LUMC/ZOSPy", "api_url": "https://rseng.github.io/software/api/repos/github/MREYE-LUMC/ZOSPy"}, {"uid": "github/jts/sga", "html_url": "https://rseng.github.io/software/repository/github/jts/sga", "api_url": "https://rseng.github.io/software/api/repos/github/jts/sga"}, {"uid": "github/jts/nanopolish", "html_url": "https://rseng.github.io/software/repository/github/jts/nanopolish", "api_url": "https://rseng.github.io/software/api/repos/github/jts/nanopolish"}, {"uid": "github/YuRui8879/MRASleepNet", "html_url": "https://rseng.github.io/software/repository/github/YuRui8879/MRASleepNet", "api_url": "https://rseng.github.io/software/api/repos/github/YuRui8879/MRASleepNet"}, {"uid": "github/linbox-team/linbox", "html_url": "https://rseng.github.io/software/repository/github/linbox-team/linbox", "api_url": "https://rseng.github.io/software/api/repos/github/linbox-team/linbox"}, {"uid": "github/inducer/modepy", "html_url": "https://rseng.github.io/software/repository/github/inducer/modepy", "api_url": "https://rseng.github.io/software/api/repos/github/inducer/modepy"}, {"uid": "github/kpicteam/kpic_pipeline", "html_url": "https://rseng.github.io/software/repository/github/kpicteam/kpic_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/kpicteam/kpic_pipeline"}, {"uid": "github/minzastro/unidam", "html_url": "https://rseng.github.io/software/repository/github/minzastro/unidam", "api_url": "https://rseng.github.io/software/api/repos/github/minzastro/unidam"}, {"uid": "github/galaxy001/pirs", "html_url": "https://rseng.github.io/software/repository/github/galaxy001/pirs", "api_url": "https://rseng.github.io/software/api/repos/github/galaxy001/pirs"}, {"uid": "github/mackelab/sbi", "html_url": "https://rseng.github.io/software/repository/github/mackelab/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/mackelab/sbi"}, {"uid": "github/Weeks-UNC/RingMapper", "html_url": "https://rseng.github.io/software/repository/github/Weeks-UNC/RingMapper", "api_url": "https://rseng.github.io/software/api/repos/github/Weeks-UNC/RingMapper"}, {"uid": "github/cbml-forth/eucaim_wizard_tool", "html_url": "https://rseng.github.io/software/repository/github/cbml-forth/eucaim_wizard_tool", "api_url": "https://rseng.github.io/software/api/repos/github/cbml-forth/eucaim_wizard_tool"}, {"uid": "github/xychcz/S3Fit", "html_url": "https://rseng.github.io/software/repository/github/xychcz/S3Fit", "api_url": "https://rseng.github.io/software/api/repos/github/xychcz/S3Fit"}, {"uid": "github/Sheng-Qi-Yang/HIILines", "html_url": "https://rseng.github.io/software/repository/github/Sheng-Qi-Yang/HIILines", "api_url": "https://rseng.github.io/software/api/repos/github/Sheng-Qi-Yang/HIILines"}, {"uid": "github/soraxas/sbp-env", "html_url": "https://rseng.github.io/software/repository/github/soraxas/sbp-env", "api_url": "https://rseng.github.io/software/api/repos/github/soraxas/sbp-env"}, {"uid": "github/dtcc-platform/dtcc-builder", "html_url": "https://rseng.github.io/software/repository/github/dtcc-platform/dtcc-builder", "api_url": "https://rseng.github.io/software/api/repos/github/dtcc-platform/dtcc-builder"}, {"uid": "github/ttgump/scDeepCluster_pytorch", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDeepCluster_pytorch", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDeepCluster_pytorch"}, {"uid": "github/ttgump/scDHMap", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDHMap", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDHMap"}, {"uid": "github/RudolfCardinal/camcops", "html_url": "https://rseng.github.io/software/repository/github/RudolfCardinal/camcops", "api_url": "https://rseng.github.io/software/api/repos/github/RudolfCardinal/camcops"}, {"uid": "github/federicomarulli/CosmoBolognaLib", "html_url": "https://rseng.github.io/software/repository/github/federicomarulli/CosmoBolognaLib", "api_url": "https://rseng.github.io/software/api/repos/github/federicomarulli/CosmoBolognaLib"}, {"uid": "github/Leo-Simpson/c-lasso", "html_url": "https://rseng.github.io/software/repository/github/Leo-Simpson/c-lasso", "api_url": "https://rseng.github.io/software/api/repos/github/Leo-Simpson/c-lasso"}, {"uid": "github/lnscan/mitoSplitter", "html_url": "https://rseng.github.io/software/repository/github/lnscan/mitoSplitter", "api_url": "https://rseng.github.io/software/api/repos/github/lnscan/mitoSplitter"}, {"uid": "github/nespinoza/exonailer", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/exonailer", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/exonailer"}, {"uid": "github/nespinoza/limb-darkening", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/limb-darkening", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/limb-darkening"}, {"uid": "github/nespinoza/juliet", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/juliet", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/juliet"}, {"uid": "github/nespinoza/mc-spam", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/mc-spam", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/mc-spam"}, {"uid": "github/nespinoza/ld-exosim", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/ld-exosim", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/ld-exosim"}, {"uid": "github/statistical-thinking/KI.ENNA", "html_url": "https://rseng.github.io/software/repository/github/statistical-thinking/KI.ENNA", "api_url": "https://rseng.github.io/software/api/repos/github/statistical-thinking/KI.ENNA"}, {"uid": "github/migueldvb/cine", "html_url": "https://rseng.github.io/software/repository/github/migueldvb/cine", "api_url": "https://rseng.github.io/software/api/repos/github/migueldvb/cine"}, {"uid": "github/vavrines/Kinetic.jl", "html_url": "https://rseng.github.io/software/repository/github/vavrines/Kinetic.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vavrines/Kinetic.jl"}, {"uid": "github/daniel-muthukrishna/astrodash", "html_url": "https://rseng.github.io/software/repository/github/daniel-muthukrishna/astrodash", "api_url": "https://rseng.github.io/software/api/repos/github/daniel-muthukrishna/astrodash"}, {"uid": "github/EliabCanul/nauyaca", "html_url": "https://rseng.github.io/software/repository/github/EliabCanul/nauyaca", "api_url": "https://rseng.github.io/software/api/repos/github/EliabCanul/nauyaca"}, {"uid": "github/carlodev/SyntheticEddyMethod.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SyntheticEddyMethod.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SyntheticEddyMethod.jl"}, {"uid": "github/carlodev/SegregatedVMSSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SegregatedVMSSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SegregatedVMSSolver.jl"}, {"uid": "github/KopalliV/Benchmarking_graph_pipelines", "html_url": "https://rseng.github.io/software/repository/github/KopalliV/Benchmarking_graph_pipelines", "api_url": "https://rseng.github.io/software/api/repos/github/KopalliV/Benchmarking_graph_pipelines"}, {"uid": "github/CityU-AIM-Group/HTD", "html_url": "https://rseng.github.io/software/repository/github/CityU-AIM-Group/HTD", "api_url": "https://rseng.github.io/software/api/repos/github/CityU-AIM-Group/HTD"}, {"uid": "github/yjx1217/RecombineX", "html_url": "https://rseng.github.io/software/repository/github/yjx1217/RecombineX", "api_url": "https://rseng.github.io/software/api/repos/github/yjx1217/RecombineX"}, {"uid": "github/healytwin1/HISS", "html_url": "https://rseng.github.io/software/repository/github/healytwin1/HISS", "api_url": "https://rseng.github.io/software/api/repos/github/healytwin1/HISS"}, {"uid": "github/choosehappy/HoverFast", "html_url": "https://rseng.github.io/software/repository/github/choosehappy/HoverFast", "api_url": "https://rseng.github.io/software/api/repos/github/choosehappy/HoverFast"}, {"uid": "github/PanKonstantinos/MEvA-X", "html_url": "https://rseng.github.io/software/repository/github/PanKonstantinos/MEvA-X", "api_url": "https://rseng.github.io/software/api/repos/github/PanKonstantinos/MEvA-X"}, {"uid": "github/adamjermyn/Skye", "html_url": "https://rseng.github.io/software/repository/github/adamjermyn/Skye", "api_url": "https://rseng.github.io/software/api/repos/github/adamjermyn/Skye"}, {"uid": "github/jfwallin/JSPAM", "html_url": "https://rseng.github.io/software/repository/github/jfwallin/JSPAM", "api_url": "https://rseng.github.io/software/api/repos/github/jfwallin/JSPAM"}, {"uid": "github/clawpack/pyclaw", "html_url": "https://rseng.github.io/software/repository/github/clawpack/pyclaw", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/pyclaw"}, {"uid": "github/clawpack/clawpack", "html_url": "https://rseng.github.io/software/repository/github/clawpack/clawpack", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/clawpack"}, {"uid": "github/mirapy-org/mirapy", "html_url": "https://rseng.github.io/software/repository/github/mirapy-org/mirapy", "api_url": "https://rseng.github.io/software/api/repos/github/mirapy-org/mirapy"}, {"uid": "github/abeelen/powspec", "html_url": "https://rseng.github.io/software/repository/github/abeelen/powspec", "api_url": "https://rseng.github.io/software/api/repos/github/abeelen/powspec"}, {"uid": "github/shankarpandala/lazypredict", "html_url": "https://rseng.github.io/software/repository/github/shankarpandala/lazypredict", "api_url": "https://rseng.github.io/software/api/repos/github/shankarpandala/lazypredict"}, {"uid": "github/hemanthpruthvi/PyAstroPol", "html_url": "https://rseng.github.io/software/repository/github/hemanthpruthvi/PyAstroPol", "api_url": "https://rseng.github.io/software/api/repos/github/hemanthpruthvi/PyAstroPol"}, {"uid": "github/jbrakensiek/CORBITS", "html_url": "https://rseng.github.io/software/repository/github/jbrakensiek/CORBITS", "api_url": "https://rseng.github.io/software/api/repos/github/jbrakensiek/CORBITS"}, {"uid": "github/guangtunbenzhu/NonnegMFPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/NonnegMFPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/NonnegMFPy"}, {"uid": "github/guangtunbenzhu/SetCoverPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/SetCoverPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/SetCoverPy"}, {"uid": "github/wm75/vaporup", "html_url": "https://rseng.github.io/software/repository/github/wm75/vaporup", "api_url": "https://rseng.github.io/software/api/repos/github/wm75/vaporup"}, {"uid": "github/codemeleon/seqPanther", "html_url": "https://rseng.github.io/software/repository/github/codemeleon/seqPanther", "api_url": "https://rseng.github.io/software/api/repos/github/codemeleon/seqPanther"}, {"uid": "github/FridleyLab/spatialGE", "html_url": "https://rseng.github.io/software/repository/github/FridleyLab/spatialGE", "api_url": "https://rseng.github.io/software/api/repos/github/FridleyLab/spatialGE"}, {"uid": "github/magnuspalmblad/navpa", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/navpa", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/navpa"}, {"uid": "github/magnuspalmblad/shic", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/shic", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/shic"}, {"uid": "github/magnuspalmblad/averageRegions", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/averageRegions", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/averageRegions"}, {"uid": "github/magnuspalmblad/addFeatures", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/addFeatures", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/addFeatures"}, {"uid": "github/bareid/cosmoxi2d", "html_url": "https://rseng.github.io/software/repository/github/bareid/cosmoxi2d", "api_url": "https://rseng.github.io/software/api/repos/github/bareid/cosmoxi2d"}, {"uid": "github/pavanvyn/triple-stability", "html_url": "https://rseng.github.io/software/repository/github/pavanvyn/triple-stability", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvyn/triple-stability"}, {"uid": "github/sharmalab/eaglescope", "html_url": "https://rseng.github.io/software/repository/github/sharmalab/eaglescope", "api_url": "https://rseng.github.io/software/api/repos/github/sharmalab/eaglescope"}, {"uid": "github/anugrahjo/PySLSQP", "html_url": "https://rseng.github.io/software/repository/github/anugrahjo/PySLSQP", "api_url": "https://rseng.github.io/software/api/repos/github/anugrahjo/PySLSQP"}, {"uid": "github/nonlocalmodels/NLMech", "html_url": "https://rseng.github.io/software/repository/github/nonlocalmodels/NLMech", "api_url": "https://rseng.github.io/software/api/repos/github/nonlocalmodels/NLMech"}, {"uid": "github/supsi-dacd-isaac/BayesReconPy", "html_url": "https://rseng.github.io/software/repository/github/supsi-dacd-isaac/BayesReconPy", "api_url": "https://rseng.github.io/software/api/repos/github/supsi-dacd-isaac/BayesReconPy"}, {"uid": "github/aothmane-control/Algebraic-differentiators", "html_url": "https://rseng.github.io/software/repository/github/aothmane-control/Algebraic-differentiators", "api_url": "https://rseng.github.io/software/api/repos/github/aothmane-control/Algebraic-differentiators"}, {"uid": "github/HalHaggard/EARL", "html_url": "https://rseng.github.io/software/repository/github/HalHaggard/EARL", "api_url": "https://rseng.github.io/software/api/repos/github/HalHaggard/EARL"}, {"uid": "github/Valires/er-evaluation", "html_url": "https://rseng.github.io/software/repository/github/Valires/er-evaluation", "api_url": "https://rseng.github.io/software/api/repos/github/Valires/er-evaluation"}, {"uid": "github/synchrofit/synchrofit", "html_url": "https://rseng.github.io/software/repository/github/synchrofit/synchrofit", "api_url": "https://rseng.github.io/software/api/repos/github/synchrofit/synchrofit"}, {"uid": "github/jakelangham/kestrel", "html_url": "https://rseng.github.io/software/repository/github/jakelangham/kestrel", "api_url": "https://rseng.github.io/software/api/repos/github/jakelangham/kestrel"}, {"uid": "github/yfperezg/frisbhee", "html_url": "https://rseng.github.io/software/repository/github/yfperezg/frisbhee", "api_url": "https://rseng.github.io/software/api/repos/github/yfperezg/frisbhee"}, {"uid": "github/glue-viz/glue", "html_url": "https://rseng.github.io/software/repository/github/glue-viz/glue", "api_url": "https://rseng.github.io/software/api/repos/github/glue-viz/glue"}, {"uid": "github/gtw2i/GA-Galaxy", "html_url": "https://rseng.github.io/software/repository/github/gtw2i/GA-Galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/gtw2i/GA-Galaxy"}, {"uid": "github/ExoplanetML/Nigraha", "html_url": "https://rseng.github.io/software/repository/github/ExoplanetML/Nigraha", "api_url": "https://rseng.github.io/software/api/repos/github/ExoplanetML/Nigraha"}, {"uid": "github/mahulchak/quickmerge", "html_url": "https://rseng.github.io/software/repository/github/mahulchak/quickmerge", "api_url": "https://rseng.github.io/software/api/repos/github/mahulchak/quickmerge"}, {"uid": "github/adamgayoso/totalVI_reproducibility", "html_url": "https://rseng.github.io/software/repository/github/adamgayoso/totalVI_reproducibility", "api_url": "https://rseng.github.io/software/api/repos/github/adamgayoso/totalVI_reproducibility"}, {"uid": "github/marberts/piar", "html_url": "https://rseng.github.io/software/repository/github/marberts/piar", "api_url": "https://rseng.github.io/software/api/repos/github/marberts/piar"}, {"uid": "github/tesselle/aion", "html_url": "https://rseng.github.io/software/repository/github/tesselle/aion", "api_url": "https://rseng.github.io/software/api/repos/github/tesselle/aion"}, {"uid": "github/Maison-de-la-Simulation/heraclespp", "html_url": "https://rseng.github.io/software/repository/github/Maison-de-la-Simulation/heraclespp", "api_url": "https://rseng.github.io/software/api/repos/github/Maison-de-la-Simulation/heraclespp"}, {"uid": "github/epic-astronomy/EPIC", "html_url": "https://rseng.github.io/software/repository/github/epic-astronomy/EPIC", "api_url": "https://rseng.github.io/software/api/repos/github/epic-astronomy/EPIC"}, {"uid": "github/MarkusPic/intensity_duration_frequency_analysis", "html_url": "https://rseng.github.io/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/MarkusPic/intensity_duration_frequency_analysis"}, {"uid": "github/BEAST-Fitting/beast", "html_url": "https://rseng.github.io/software/repository/github/BEAST-Fitting/beast", "api_url": "https://rseng.github.io/software/api/repos/github/BEAST-Fitting/beast"}, {"uid": "github/Varnani/pywd2015-qt5", "html_url": "https://rseng.github.io/software/repository/github/Varnani/pywd2015-qt5", "api_url": "https://rseng.github.io/software/api/repos/github/Varnani/pywd2015-qt5"}, {"uid": "github/marcelm/dnaio", "html_url": "https://rseng.github.io/software/repository/github/marcelm/dnaio", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/dnaio"}, {"uid": "github/marcelm/tinyalign", "html_url": "https://rseng.github.io/software/repository/github/marcelm/tinyalign", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/tinyalign"}, {"uid": "github/marcelm/alignlib", "html_url": "https://rseng.github.io/software/repository/github/marcelm/alignlib", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/alignlib"}, {"uid": "github/marcelm/cutadapt", "html_url": "https://rseng.github.io/software/repository/github/marcelm/cutadapt", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/cutadapt"}, {"uid": "github/KiranLDA/PAMLr", "html_url": "https://rseng.github.io/software/repository/github/KiranLDA/PAMLr", "api_url": "https://rseng.github.io/software/api/repos/github/KiranLDA/PAMLr"}, {"uid": "github/sanctuuary/ape", "html_url": "https://rseng.github.io/software/repository/github/sanctuuary/ape", "api_url": "https://rseng.github.io/software/api/repos/github/sanctuuary/ape"}, {"uid": "github/linDing-groups/Deep-4mCW2V", "html_url": "https://rseng.github.io/software/repository/github/linDing-groups/Deep-4mCW2V", "api_url": "https://rseng.github.io/software/api/repos/github/linDing-groups/Deep-4mCW2V"}, {"uid": "github/EMBL-Hentze-group/htseq-clip", "html_url": "https://rseng.github.io/software/repository/github/EMBL-Hentze-group/htseq-clip", "api_url": "https://rseng.github.io/software/api/repos/github/EMBL-Hentze-group/htseq-clip"}, {"uid": "github/Tarskin/LaCyTools", "html_url": "https://rseng.github.io/software/repository/github/Tarskin/LaCyTools", "api_url": "https://rseng.github.io/software/api/repos/github/Tarskin/LaCyTools"}, {"uid": "github/CompiledAtBirth/pyCARPool", "html_url": "https://rseng.github.io/software/repository/github/CompiledAtBirth/pyCARPool", "api_url": "https://rseng.github.io/software/api/repos/github/CompiledAtBirth/pyCARPool"}, {"uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", "html_url": "https://rseng.github.io/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", "api_url": "https://rseng.github.io/software/api/repos/github/Aarhus-Psychiatry-Research/timeseriesflattener"}, {"uid": "github/ctSkennerton/minced", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/minced", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/minced"}, {"uid": "github/ctSkennerton/crass", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/crass", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/crass"}, {"uid": "github/nabeelre/NIMBLE", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/NIMBLE", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/NIMBLE"}, {"uid": "github/nabeelre/BTSbot", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/BTSbot", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/BTSbot"}, {"uid": "github/nyusngroup/pyMCZ", "html_url": "https://rseng.github.io/software/repository/github/nyusngroup/pyMCZ", "api_url": "https://rseng.github.io/software/api/repos/github/nyusngroup/pyMCZ"}, {"uid": "github/niceume/datasailr", "html_url": "https://rseng.github.io/software/repository/github/niceume/datasailr", "api_url": "https://rseng.github.io/software/api/repos/github/niceume/datasailr"}, {"uid": "github/rinikerlab/Ensembler", "html_url": "https://rseng.github.io/software/repository/github/rinikerlab/Ensembler", "api_url": "https://rseng.github.io/software/api/repos/github/rinikerlab/Ensembler"}, {"uid": "github/astrockragh/Mangrove", "html_url": "https://rseng.github.io/software/repository/github/astrockragh/Mangrove", "api_url": "https://rseng.github.io/software/api/repos/github/astrockragh/Mangrove"}, {"uid": "github/hytrac/amber", "html_url": "https://rseng.github.io/software/repository/github/hytrac/amber", "api_url": "https://rseng.github.io/software/api/repos/github/hytrac/amber"}, {"uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TransitionsInTimeseries.jl"}, {"uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TimeseriesSurrogates.jl"}, {"uid": "github/JuliaDynamics/DrWatson.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/DrWatson.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/DrWatson.jl"}, {"uid": "github/user29A/fastrometry", "html_url": "https://rseng.github.io/software/repository/github/user29A/fastrometry", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/fastrometry"}, {"uid": "github/user29A/CCDLAB", "html_url": "https://rseng.github.io/software/repository/github/user29A/CCDLAB", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/CCDLAB"}, {"uid": "github/user29A/JPFITS", "html_url": "https://rseng.github.io/software/repository/github/user29A/JPFITS", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/JPFITS"}, {"uid": "github/seap-udea/iWander", "html_url": "https://rseng.github.io/software/repository/github/seap-udea/iWander", "api_url": "https://rseng.github.io/software/api/repos/github/seap-udea/iWander"}, {"uid": "github/valerio-marra/CalPriorSNIa", "html_url": "https://rseng.github.io/software/repository/github/valerio-marra/CalPriorSNIa", "api_url": "https://rseng.github.io/software/api/repos/github/valerio-marra/CalPriorSNIa"}, {"uid": "github/fred3m/toyz", "html_url": "https://rseng.github.io/software/repository/github/fred3m/toyz", "api_url": "https://rseng.github.io/software/api/repos/github/fred3m/toyz"}, {"uid": "github/rudeboybert/forestecology", "html_url": "https://rseng.github.io/software/repository/github/rudeboybert/forestecology", "api_url": "https://rseng.github.io/software/api/repos/github/rudeboybert/forestecology"}, {"uid": "github/CEMeNT-PSAAP/MCDC", "html_url": "https://rseng.github.io/software/repository/github/CEMeNT-PSAAP/MCDC", "api_url": "https://rseng.github.io/software/api/repos/github/CEMeNT-PSAAP/MCDC"}, {"uid": "github/arcaldwell49/SimplyAgree", "html_url": "https://rseng.github.io/software/repository/github/arcaldwell49/SimplyAgree", "api_url": "https://rseng.github.io/software/api/repos/github/arcaldwell49/SimplyAgree"}, {"uid": "github/cosmo-epfl/chemiscope", "html_url": "https://rseng.github.io/software/repository/github/cosmo-epfl/chemiscope", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-epfl/chemiscope"}, {"uid": "github/marieBvr/virAnnot", "html_url": "https://rseng.github.io/software/repository/github/marieBvr/virAnnot", "api_url": "https://rseng.github.io/software/api/repos/github/marieBvr/virAnnot"}, {"uid": "github/raghuastro/GRIZZLY", "html_url": "https://rseng.github.io/software/repository/github/raghuastro/GRIZZLY", "api_url": "https://rseng.github.io/software/api/repos/github/raghuastro/GRIZZLY"}, {"uid": "github/saigegit/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/saigegit/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/saigegit/SAIGE"}, {"uid": "github/hydrosolutions/riversCentralAsia", "html_url": "https://rseng.github.io/software/repository/github/hydrosolutions/riversCentralAsia", "api_url": "https://rseng.github.io/software/api/repos/github/hydrosolutions/riversCentralAsia"}, {"uid": "github/HajkD/LTRpred", "html_url": "https://rseng.github.io/software/repository/github/HajkD/LTRpred", "api_url": "https://rseng.github.io/software/api/repos/github/HajkD/LTRpred"}, {"uid": "github/vallis/mc3pta", "html_url": "https://rseng.github.io/software/repository/github/vallis/mc3pta", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/mc3pta"}, {"uid": "github/vallis/libstempo", "html_url": "https://rseng.github.io/software/repository/github/vallis/libstempo", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/libstempo"}, {"uid": "github/radiocosmology/caput", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/caput", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/caput"}, {"uid": "github/radiocosmology/driftscan", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/driftscan", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/driftscan"}, {"uid": "github/radiocosmology/draco", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/draco", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/draco"}, {"uid": "github/qiangyicheng/flory", "html_url": "https://rseng.github.io/software/repository/github/qiangyicheng/flory", "api_url": "https://rseng.github.io/software/api/repos/github/qiangyicheng/flory"}, {"uid": "github/osallou/cassiopee-c", "html_url": "https://rseng.github.io/software/repository/github/osallou/cassiopee-c", "api_url": "https://rseng.github.io/software/api/repos/github/osallou/cassiopee-c"}, {"uid": "github/gdrouart/MrMoose", "html_url": "https://rseng.github.io/software/repository/github/gdrouart/MrMoose", "api_url": "https://rseng.github.io/software/api/repos/github/gdrouart/MrMoose"}, {"uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-SimGrid"}, {"uid": "github/DreamCloud-Project/McSim-TLM-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-TLM-NoC"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-NoC"}, {"uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator"}, {"uid": "github/joefarrington/mdpax", "html_url": "https://rseng.github.io/software/repository/github/joefarrington/mdpax", "api_url": "https://rseng.github.io/software/api/repos/github/joefarrington/mdpax"}, {"uid": "github/schlafly/crowdsource", "html_url": "https://rseng.github.io/software/repository/github/schlafly/crowdsource", "api_url": "https://rseng.github.io/software/api/repos/github/schlafly/crowdsource"}, {"uid": "github/GeminiDRSoftware/DRAGONS", "html_url": "https://rseng.github.io/software/repository/github/GeminiDRSoftware/DRAGONS", "api_url": "https://rseng.github.io/software/api/repos/github/GeminiDRSoftware/DRAGONS"}, {"uid": "github/astrocatalogs/astrocats", "html_url": "https://rseng.github.io/software/repository/github/astrocatalogs/astrocats", "api_url": "https://rseng.github.io/software/api/repos/github/astrocatalogs/astrocats"}, {"uid": "github/MichielsenM/FOAM", "html_url": "https://rseng.github.io/software/repository/github/MichielsenM/FOAM", "api_url": "https://rseng.github.io/software/api/repos/github/MichielsenM/FOAM"}, {"uid": "github/AdriaJ/polyclean", "html_url": "https://rseng.github.io/software/repository/github/AdriaJ/polyclean", "api_url": "https://rseng.github.io/software/api/repos/github/AdriaJ/polyclean"}, {"uid": "github/BogdanCiambur/PROFILER", "html_url": "https://rseng.github.io/software/repository/github/BogdanCiambur/PROFILER", "api_url": "https://rseng.github.io/software/api/repos/github/BogdanCiambur/PROFILER"}, {"uid": "github/TheFischerLab/FLEXR", "html_url": "https://rseng.github.io/software/repository/github/TheFischerLab/FLEXR", "api_url": "https://rseng.github.io/software/api/repos/github/TheFischerLab/FLEXR"}, {"uid": "github/Cantera/cantera", "html_url": "https://rseng.github.io/software/repository/github/Cantera/cantera", "api_url": "https://rseng.github.io/software/api/repos/github/Cantera/cantera"}, {"uid": "github/crs4/rocrate-validator", "html_url": "https://rseng.github.io/software/repository/github/crs4/rocrate-validator", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/rocrate-validator"}, {"uid": "github/crs4/life_monitor", "html_url": "https://rseng.github.io/software/repository/github/crs4/life_monitor", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/life_monitor"}, {"uid": "github/PengyiZhang/DRR4Covid", "html_url": "https://rseng.github.io/software/repository/github/PengyiZhang/DRR4Covid", "api_url": "https://rseng.github.io/software/api/repos/github/PengyiZhang/DRR4Covid"}, {"uid": "github/atmos-cloud-sim-uj/PySDM", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PySDM", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PySDM"}, {"uid": "github/atmos-cloud-sim-uj/PyMPDATA", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PyMPDATA"}, {"uid": "github/OceanParcels/plasticparcels", "html_url": "https://rseng.github.io/software/repository/github/OceanParcels/plasticparcels", "api_url": "https://rseng.github.io/software/api/repos/github/OceanParcels/plasticparcels"}, {"uid": "github/entangled/entangled", "html_url": "https://rseng.github.io/software/repository/github/entangled/entangled", "api_url": "https://rseng.github.io/software/api/repos/github/entangled/entangled"}, {"uid": "github/era-urban/wrfpy", "html_url": "https://rseng.github.io/software/repository/github/era-urban/wrfpy", "api_url": "https://rseng.github.io/software/api/repos/github/era-urban/wrfpy"}, {"uid": "github/AmeryGration/dyad", "html_url": "https://rseng.github.io/software/repository/github/AmeryGration/dyad", "api_url": "https://rseng.github.io/software/api/repos/github/AmeryGration/dyad"}, {"uid": "github/open-aviation/tangram", "html_url": "https://rseng.github.io/software/repository/github/open-aviation/tangram", "api_url": "https://rseng.github.io/software/api/repos/github/open-aviation/tangram"}, {"uid": "github/Dfupa/meTAline", "html_url": "https://rseng.github.io/software/repository/github/Dfupa/meTAline", "api_url": "https://rseng.github.io/software/api/repos/github/Dfupa/meTAline"}, {"uid": "github/jdonnert/WVTICs", "html_url": "https://rseng.github.io/software/repository/github/jdonnert/WVTICs", "api_url": "https://rseng.github.io/software/api/repos/github/jdonnert/WVTICs"}, {"uid": "github/ZacharyJia/opsdn", "html_url": "https://rseng.github.io/software/repository/github/ZacharyJia/opsdn", "api_url": "https://rseng.github.io/software/api/repos/github/ZacharyJia/opsdn"}, {"uid": "github/acbecker/hotpants", "html_url": "https://rseng.github.io/software/repository/github/acbecker/hotpants", "api_url": "https://rseng.github.io/software/api/repos/github/acbecker/hotpants"}, {"uid": "github/equitable-equations/fqar", "html_url": "https://rseng.github.io/software/repository/github/equitable-equations/fqar", "api_url": "https://rseng.github.io/software/api/repos/github/equitable-equations/fqar"}, {"uid": "github/kotekan/kotekan", "html_url": "https://rseng.github.io/software/repository/github/kotekan/kotekan", "api_url": "https://rseng.github.io/software/api/repos/github/kotekan/kotekan"}, {"uid": "github/shahmoradi/grb_world", "html_url": "https://rseng.github.io/software/repository/github/shahmoradi/grb_world", "api_url": "https://rseng.github.io/software/api/repos/github/shahmoradi/grb_world"}, {"uid": "github/inpefess/gym-saturation", "html_url": "https://rseng.github.io/software/repository/github/inpefess/gym-saturation", "api_url": "https://rseng.github.io/software/api/repos/github/inpefess/gym-saturation"}, {"uid": "github/ConesaLab/MultiPower", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MultiPower", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MultiPower"}, {"uid": "github/ConesaLab/SQANTI3", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/SQANTI3", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/SQANTI3"}, {"uid": "github/ConesaLab/MOSim", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MOSim", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MOSim"}, {"uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", "html_url": "https://rseng.github.io/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", "api_url": "https://rseng.github.io/software/api/repos/github/semiautomaticgit/SemiAutomaticClassificationPlugin"}, {"uid": "github/xzackli/WignerFamilies.jl", "html_url": "https://rseng.github.io/software/repository/github/xzackli/WignerFamilies.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xzackli/WignerFamilies.jl"}, {"uid": "github/xastprl/darsakx", "html_url": "https://rseng.github.io/software/repository/github/xastprl/darsakx", "api_url": "https://rseng.github.io/software/api/repos/github/xastprl/darsakx"}, {"uid": "github/Health-RI/img2catalog", "html_url": "https://rseng.github.io/software/repository/github/Health-RI/img2catalog", "api_url": "https://rseng.github.io/software/api/repos/github/Health-RI/img2catalog"}, {"uid": "github/hjens/lasso_spectra", "html_url": "https://rseng.github.io/software/repository/github/hjens/lasso_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/hjens/lasso_spectra"}, {"uid": "github/cinemascience/cinema_snap", "html_url": "https://rseng.github.io/software/repository/github/cinemascience/cinema_snap", "api_url": "https://rseng.github.io/software/api/repos/github/cinemascience/cinema_snap"}, {"uid": "github/henrikju/resolve", "html_url": "https://rseng.github.io/software/repository/github/henrikju/resolve", "api_url": "https://rseng.github.io/software/api/repos/github/henrikju/resolve"}, {"uid": "github/genomicepidemiology/ARGprofiler", "html_url": "https://rseng.github.io/software/repository/github/genomicepidemiology/ARGprofiler", "api_url": "https://rseng.github.io/software/api/repos/github/genomicepidemiology/ARGprofiler"}, {"uid": "github/emerge-erc/ALminer", "html_url": "https://rseng.github.io/software/repository/github/emerge-erc/ALminer", "api_url": "https://rseng.github.io/software/api/repos/github/emerge-erc/ALminer"}, {"uid": "github/storyofthewolf/ExoRT", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoRT", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoRT"}, {"uid": "github/storyofthewolf/ExoCAM", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoCAM", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoCAM"}, {"uid": "github/nebblu/ReACT", "html_url": "https://rseng.github.io/software/repository/github/nebblu/ReACT", "api_url": "https://rseng.github.io/software/api/repos/github/nebblu/ReACT"}, {"uid": "github/canorve/EllipSect", "html_url": "https://rseng.github.io/software/repository/github/canorve/EllipSect", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/EllipSect"}, {"uid": "github/canorve/GALFITools", "html_url": "https://rseng.github.io/software/repository/github/canorve/GALFITools", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/GALFITools"}, {"uid": "github/JesusTorrado/extrapops", "html_url": "https://rseng.github.io/software/repository/github/JesusTorrado/extrapops", "api_url": "https://rseng.github.io/software/api/repos/github/JesusTorrado/extrapops"}, {"uid": "github/LuisScoccola/persistable", "html_url": "https://rseng.github.io/software/repository/github/LuisScoccola/persistable", "api_url": "https://rseng.github.io/software/api/repos/github/LuisScoccola/persistable"}, {"uid": "github/pengweixing/FACT", "html_url": "https://rseng.github.io/software/repository/github/pengweixing/FACT", "api_url": "https://rseng.github.io/software/api/repos/github/pengweixing/FACT"}, {"uid": "github/flabarga/iSTARMOD", "html_url": "https://rseng.github.io/software/repository/github/flabarga/iSTARMOD", "api_url": "https://rseng.github.io/software/api/repos/github/flabarga/iSTARMOD"}, {"uid": "github/vcftools/index.html", "html_url": "https://rseng.github.io/software/repository/github/vcftools/index.html", "api_url": "https://rseng.github.io/software/api/repos/github/vcftools/index.html"}, {"uid": "github/grazianoucci/game", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/game", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/game"}, {"uid": "github/grazianoucci/cosmic_variance", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/cosmic_variance", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/cosmic_variance"}, {"uid": "github/kd0kfo/cosmology", "html_url": "https://rseng.github.io/software/repository/github/kd0kfo/cosmology", "api_url": "https://rseng.github.io/software/api/repos/github/kd0kfo/cosmology"}, {"uid": "github/egpbos/barcode", "html_url": "https://rseng.github.io/software/repository/github/egpbos/barcode", "api_url": "https://rseng.github.io/software/api/repos/github/egpbos/barcode"}, {"uid": "github/MNGuenther/allesfitter", "html_url": "https://rseng.github.io/software/repository/github/MNGuenther/allesfitter", "api_url": "https://rseng.github.io/software/api/repos/github/MNGuenther/allesfitter"}, {"uid": "github/bow/crimson", "html_url": "https://rseng.github.io/software/repository/github/bow/crimson", "api_url": "https://rseng.github.io/software/api/repos/github/bow/crimson"}, {"uid": "github/bow/fsnviz", "html_url": "https://rseng.github.io/software/repository/github/bow/fsnviz", "api_url": "https://rseng.github.io/software/api/repos/github/bow/fsnviz"}, {"uid": "github/Dulab2020/ARMT", "html_url": "https://rseng.github.io/software/repository/github/Dulab2020/ARMT", "api_url": "https://rseng.github.io/software/api/repos/github/Dulab2020/ARMT"}, {"uid": "github/GalacticDynamics-Oxford/Agama", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics-Oxford/Agama", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics-Oxford/Agama"}, {"uid": "github/siara-cc/Unishox2", "html_url": "https://rseng.github.io/software/repository/github/siara-cc/Unishox2", "api_url": "https://rseng.github.io/software/api/repos/github/siara-cc/Unishox2"}, {"uid": "github/tgrimes/SeqNet", "html_url": "https://rseng.github.io/software/repository/github/tgrimes/SeqNet", "api_url": "https://rseng.github.io/software/api/repos/github/tgrimes/SeqNet"}, {"uid": "github/Kushaalkumar-pothula/FLARE", "html_url": "https://rseng.github.io/software/repository/github/Kushaalkumar-pothula/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/Kushaalkumar-pothula/FLARE"}, {"uid": "github/aalhossary/pyemgpipeline", "html_url": "https://rseng.github.io/software/repository/github/aalhossary/pyemgpipeline", "api_url": "https://rseng.github.io/software/api/repos/github/aalhossary/pyemgpipeline"}, {"uid": "github/jonescompneurolab/hnn-core", "html_url": "https://rseng.github.io/software/repository/github/jonescompneurolab/hnn-core", "api_url": "https://rseng.github.io/software/api/repos/github/jonescompneurolab/hnn-core"}, {"uid": "github/cbielow/PTXQC", "html_url": "https://rseng.github.io/software/repository/github/cbielow/PTXQC", "api_url": "https://rseng.github.io/software/api/repos/github/cbielow/PTXQC"}, {"uid": "github/magnusmanske/snpomatic", "html_url": "https://rseng.github.io/software/repository/github/magnusmanske/snpomatic", "api_url": "https://rseng.github.io/software/api/repos/github/magnusmanske/snpomatic"}, {"uid": "github/pepkit/geofetch", "html_url": "https://rseng.github.io/software/repository/github/pepkit/geofetch", "api_url": "https://rseng.github.io/software/api/repos/github/pepkit/geofetch"}, {"uid": "github/shaniAmare/long_read_tools", "html_url": "https://rseng.github.io/software/repository/github/shaniAmare/long_read_tools", "api_url": "https://rseng.github.io/software/api/repos/github/shaniAmare/long_read_tools"}, {"uid": "github/CPM-project/MCPM", "html_url": "https://rseng.github.io/software/repository/github/CPM-project/MCPM", "api_url": "https://rseng.github.io/software/api/repos/github/CPM-project/MCPM"}, {"uid": "github/rafaeleufrasio/lightning", "html_url": "https://rseng.github.io/software/repository/github/rafaeleufrasio/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/rafaeleufrasio/lightning"}, {"uid": "github/planck-npipe/hillipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/hillipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/hillipop"}, {"uid": "github/planck-npipe/lollipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/lollipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/lollipop"}, {"uid": "github/SERVIR/servir-aces", "html_url": "https://rseng.github.io/software/repository/github/SERVIR/servir-aces", "api_url": "https://rseng.github.io/software/api/repos/github/SERVIR/servir-aces"}, {"uid": "github/yuefan98/nleis.py", "html_url": "https://rseng.github.io/software/repository/github/yuefan98/nleis.py", "api_url": "https://rseng.github.io/software/api/repos/github/yuefan98/nleis.py"}, {"uid": "github/funkyheatmap/funkyheatmap", "html_url": "https://rseng.github.io/software/repository/github/funkyheatmap/funkyheatmap", "api_url": "https://rseng.github.io/software/api/repos/github/funkyheatmap/funkyheatmap"}, {"uid": "github/PdIPS/CBX", "html_url": "https://rseng.github.io/software/repository/github/PdIPS/CBX", "api_url": "https://rseng.github.io/software/api/repos/github/PdIPS/CBX"}, {"uid": "github/biolab/orange3", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3"}, {"uid": "github/biolab/orange3-network", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3-network", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3-network"}, {"uid": "github/biolab/orange-bio", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange-bio"}, {"uid": "github/colour-science/colour", "html_url": "https://rseng.github.io/software/repository/github/colour-science/colour", "api_url": "https://rseng.github.io/software/api/repos/github/colour-science/colour"}, {"uid": "github/Sulstice/cocktail-shaker", "html_url": "https://rseng.github.io/software/repository/github/Sulstice/cocktail-shaker", "api_url": "https://rseng.github.io/software/api/repos/github/Sulstice/cocktail-shaker"}, {"uid": "github/vreverdy/magrathea-pathfinder", "html_url": "https://rseng.github.io/software/repository/github/vreverdy/magrathea-pathfinder", "api_url": "https://rseng.github.io/software/api/repos/github/vreverdy/magrathea-pathfinder"}, {"uid": "github/aringlis/afino_release_version", "html_url": "https://rseng.github.io/software/repository/github/aringlis/afino_release_version", "api_url": "https://rseng.github.io/software/api/repos/github/aringlis/afino_release_version"}, {"uid": "github/surhudm/savitzky_golay_with_errors", "html_url": "https://rseng.github.io/software/repository/github/surhudm/savitzky_golay_with_errors", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/savitzky_golay_with_errors"}, {"uid": "github/surhudm/aum", "html_url": "https://rseng.github.io/software/repository/github/surhudm/aum", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/aum"}, {"uid": "github/nickrodd/HDMSpectra", "html_url": "https://rseng.github.io/software/repository/github/nickrodd/HDMSpectra", "api_url": "https://rseng.github.io/software/api/repos/github/nickrodd/HDMSpectra"}, {"uid": "github/dragontaoran/sleev", "html_url": "https://rseng.github.io/software/repository/github/dragontaoran/sleev", "api_url": "https://rseng.github.io/software/api/repos/github/dragontaoran/sleev"}, {"uid": "github/pfeinsper/drone-swarm-search", "html_url": "https://rseng.github.io/software/repository/github/pfeinsper/drone-swarm-search", "api_url": "https://rseng.github.io/software/api/repos/github/pfeinsper/drone-swarm-search"}, {"uid": "github/AusSRC/SoFiAX", "html_url": "https://rseng.github.io/software/repository/github/AusSRC/SoFiAX", "api_url": "https://rseng.github.io/software/api/repos/github/AusSRC/SoFiAX"}, {"uid": "github/leprojetcastor/castor", "html_url": "https://rseng.github.io/software/repository/github/leprojetcastor/castor", "api_url": "https://rseng.github.io/software/api/repos/github/leprojetcastor/castor"}, {"uid": "github/JeffLuo9/Hep_Ploidy_protocol", "html_url": "https://rseng.github.io/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLuo9/Hep_Ploidy_protocol"}, {"uid": "github/VirtualPlanetaryLaboratory/vplanet", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/vplanet", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/vplanet"}, {"uid": "github/VirtualPlanetaryLaboratory/atmos", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/atmos", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/atmos"}, {"uid": "github/tbep-tech/tbeptools", "html_url": "https://rseng.github.io/software/repository/github/tbep-tech/tbeptools", "api_url": "https://rseng.github.io/software/api/repos/github/tbep-tech/tbeptools"}, {"uid": "github/bic-nirrh/precocity", "html_url": "https://rseng.github.io/software/repository/github/bic-nirrh/precocity", "api_url": "https://rseng.github.io/software/api/repos/github/bic-nirrh/precocity"}, {"uid": "github/patrickwest/EukRep", "html_url": "https://rseng.github.io/software/repository/github/patrickwest/EukRep", "api_url": "https://rseng.github.io/software/api/repos/github/patrickwest/EukRep"}, {"uid": "github/cameronliang/BayesVP", "html_url": "https://rseng.github.io/software/repository/github/cameronliang/BayesVP", "api_url": "https://rseng.github.io/software/api/repos/github/cameronliang/BayesVP"}, {"uid": "github/bhorowitz/HyPhy-public", "html_url": "https://rseng.github.io/software/repository/github/bhorowitz/HyPhy-public", "api_url": "https://rseng.github.io/software/api/repos/github/bhorowitz/HyPhy-public"}, {"uid": "github/qianlivan/RPPPS", "html_url": "https://rseng.github.io/software/repository/github/qianlivan/RPPPS", "api_url": "https://rseng.github.io/software/api/repos/github/qianlivan/RPPPS"}, {"uid": "github/sosl/H-FISTA", "html_url": "https://rseng.github.io/software/repository/github/sosl/H-FISTA", "api_url": "https://rseng.github.io/software/api/repos/github/sosl/H-FISTA"}, {"uid": "github/sbebo/joypy", "html_url": "https://rseng.github.io/software/repository/github/sbebo/joypy", "api_url": "https://rseng.github.io/software/api/repos/github/sbebo/joypy"}, {"uid": "github/yuansh3354/CaSee", "html_url": "https://rseng.github.io/software/repository/github/yuansh3354/CaSee", "api_url": "https://rseng.github.io/software/api/repos/github/yuansh3354/CaSee"}, {"uid": "github/SAIL-Labs/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/PIRATES"}, {"uid": "github/SAIL-Labs/AMICAL", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/AMICAL", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/AMICAL"}, {"uid": "github/krab1k/ChargeFW2", "html_url": "https://rseng.github.io/software/repository/github/krab1k/ChargeFW2", "api_url": "https://rseng.github.io/software/api/repos/github/krab1k/ChargeFW2"}, {"uid": "github/arup-group/pam", "html_url": "https://rseng.github.io/software/repository/github/arup-group/pam", "api_url": "https://rseng.github.io/software/api/repos/github/arup-group/pam"}, {"uid": "github/simoncasassus/ConeRot", "html_url": "https://rseng.github.io/software/repository/github/simoncasassus/ConeRot", "api_url": "https://rseng.github.io/software/api/repos/github/simoncasassus/ConeRot"}, {"uid": "github/AnitaPetzler/AMOEBA", "html_url": "https://rseng.github.io/software/repository/github/AnitaPetzler/AMOEBA", "api_url": "https://rseng.github.io/software/api/repos/github/AnitaPetzler/AMOEBA"}, {"uid": "github/horovod/horovod", "html_url": "https://rseng.github.io/software/repository/github/horovod/horovod", "api_url": "https://rseng.github.io/software/api/repos/github/horovod/horovod"}, {"uid": "github/nigyta/dfast_core", "html_url": "https://rseng.github.io/software/repository/github/nigyta/dfast_core", "api_url": "https://rseng.github.io/software/api/repos/github/nigyta/dfast_core"}, {"uid": "github/infer-actively/pymdp", "html_url": "https://rseng.github.io/software/repository/github/infer-actively/pymdp", "api_url": "https://rseng.github.io/software/api/repos/github/infer-actively/pymdp"}, {"uid": "github/andreasmang/claire", "html_url": "https://rseng.github.io/software/repository/github/andreasmang/claire", "api_url": "https://rseng.github.io/software/api/repos/github/andreasmang/claire"}, {"uid": "github/OSU-BMBL/IDAM", "html_url": "https://rseng.github.io/software/repository/github/OSU-BMBL/IDAM", "api_url": "https://rseng.github.io/software/api/repos/github/OSU-BMBL/IDAM"}, {"uid": "github/sustainableaviation/jetfuelburn", "html_url": "https://rseng.github.io/software/repository/github/sustainableaviation/jetfuelburn", "api_url": "https://rseng.github.io/software/api/repos/github/sustainableaviation/jetfuelburn"}, {"uid": "github/mswzeus/TargetNet", "html_url": "https://rseng.github.io/software/repository/github/mswzeus/TargetNet", "api_url": "https://rseng.github.io/software/api/repos/github/mswzeus/TargetNet"}, {"uid": "github/wfondrie/mokapot", "html_url": "https://rseng.github.io/software/repository/github/wfondrie/mokapot", "api_url": "https://rseng.github.io/software/api/repos/github/wfondrie/mokapot"}, {"uid": "github/mes5k/amap-align", "html_url": "https://rseng.github.io/software/repository/github/mes5k/amap-align", "api_url": "https://rseng.github.io/software/api/repos/github/mes5k/amap-align"}, {"uid": "github/openscm/openscm-twolayermodel", "html_url": "https://rseng.github.io/software/repository/github/openscm/openscm-twolayermodel", "api_url": "https://rseng.github.io/software/api/repos/github/openscm/openscm-twolayermodel"}, {"uid": "github/fitbenchmarking/fitbenchmarking", "html_url": "https://rseng.github.io/software/repository/github/fitbenchmarking/fitbenchmarking", "api_url": "https://rseng.github.io/software/api/repos/github/fitbenchmarking/fitbenchmarking"}, {"uid": "github/ZhaoXM-Lab/metaMIC", "html_url": "https://rseng.github.io/software/repository/github/ZhaoXM-Lab/metaMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaoXM-Lab/metaMIC"}, {"uid": "github/ANP-Granular/ParticleTracking", "html_url": "https://rseng.github.io/software/repository/github/ANP-Granular/ParticleTracking", "api_url": "https://rseng.github.io/software/api/repos/github/ANP-Granular/ParticleTracking"}, {"uid": "github/odb9402/CNNPeaks", "html_url": "https://rseng.github.io/software/repository/github/odb9402/CNNPeaks", "api_url": "https://rseng.github.io/software/api/repos/github/odb9402/CNNPeaks"}, {"uid": "github/soichiro-hattori/unpopular", "html_url": "https://rseng.github.io/software/repository/github/soichiro-hattori/unpopular", "api_url": "https://rseng.github.io/software/api/repos/github/soichiro-hattori/unpopular"}, {"uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "html_url": "https://rseng.github.io/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "api_url": "https://rseng.github.io/software/api/repos/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling"}, {"uid": "github/HingeAssembler/HINGE", "html_url": "https://rseng.github.io/software/repository/github/HingeAssembler/HINGE", "api_url": "https://rseng.github.io/software/api/repos/github/HingeAssembler/HINGE"}, {"uid": "github/marbl/Krona", "html_url": "https://rseng.github.io/software/repository/github/marbl/Krona", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Krona"}, {"uid": "github/marbl/Mash", "html_url": "https://rseng.github.io/software/repository/github/marbl/Mash", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Mash"}, {"uid": "github/marbl/MashMap", "html_url": "https://rseng.github.io/software/repository/github/marbl/MashMap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/MashMap"}, {"uid": "github/marbl/Winnowmap", "html_url": "https://rseng.github.io/software/repository/github/marbl/Winnowmap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Winnowmap"}, {"uid": "github/dbosul/CWITools", "html_url": "https://rseng.github.io/software/repository/github/dbosul/CWITools", "api_url": "https://rseng.github.io/software/api/repos/github/dbosul/CWITools"}, {"uid": "github/warrickball/tomso", "html_url": "https://rseng.github.io/software/repository/github/warrickball/tomso", "api_url": "https://rseng.github.io/software/api/repos/github/warrickball/tomso"}, {"uid": "github/fzagaria/COpops", "html_url": "https://rseng.github.io/software/repository/github/fzagaria/COpops", "api_url": "https://rseng.github.io/software/api/repos/github/fzagaria/COpops"}, {"uid": "github/fakedrtom/oncogemini", "html_url": "https://rseng.github.io/software/repository/github/fakedrtom/oncogemini", "api_url": "https://rseng.github.io/software/api/repos/github/fakedrtom/oncogemini"}, {"uid": "github/kidusasfaw/spatPomp", "html_url": "https://rseng.github.io/software/repository/github/kidusasfaw/spatPomp", "api_url": "https://rseng.github.io/software/api/repos/github/kidusasfaw/spatPomp"}, {"uid": "github/EC-Earth/ece2cmor3", "html_url": "https://rseng.github.io/software/repository/github/EC-Earth/ece2cmor3", "api_url": "https://rseng.github.io/software/api/repos/github/EC-Earth/ece2cmor3"}, {"uid": "github/KennethEnevoldsen/augmenty", "html_url": "https://rseng.github.io/software/repository/github/KennethEnevoldsen/augmenty", "api_url": "https://rseng.github.io/software/api/repos/github/KennethEnevoldsen/augmenty"}, {"uid": "github/goharbor/harbor", "html_url": "https://rseng.github.io/software/repository/github/goharbor/harbor", "api_url": "https://rseng.github.io/software/api/repos/github/goharbor/harbor"}, {"uid": "github/Qepanna/goFlux", "html_url": "https://rseng.github.io/software/repository/github/Qepanna/goFlux", "api_url": "https://rseng.github.io/software/api/repos/github/Qepanna/goFlux"}, {"uid": "github/alexji/LESSPayne", "html_url": "https://rseng.github.io/software/repository/github/alexji/LESSPayne", "api_url": "https://rseng.github.io/software/api/repos/github/alexji/LESSPayne"}, {"uid": "github/theGreatHerrLebert/rustims", "html_url": "https://rseng.github.io/software/repository/github/theGreatHerrLebert/rustims", "api_url": "https://rseng.github.io/software/api/repos/github/theGreatHerrLebert/rustims"}, {"uid": "github/JuliaHEP/UnROOT.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHEP/UnROOT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHEP/UnROOT.jl"}, {"uid": "github/feature-engine/feature_engine", "html_url": "https://rseng.github.io/software/repository/github/feature-engine/feature_engine", "api_url": "https://rseng.github.io/software/api/repos/github/feature-engine/feature_engine"}, {"uid": "github/sachsmc/cosinor", "html_url": "https://rseng.github.io/software/repository/github/sachsmc/cosinor", "api_url": "https://rseng.github.io/software/api/repos/github/sachsmc/cosinor"}, {"uid": "github/michaeltouati/ESVM", "html_url": "https://rseng.github.io/software/repository/github/michaeltouati/ESVM", "api_url": "https://rseng.github.io/software/api/repos/github/michaeltouati/ESVM"}, {"uid": "github/lucaborsato/trades", "html_url": "https://rseng.github.io/software/repository/github/lucaborsato/trades", "api_url": "https://rseng.github.io/software/api/repos/github/lucaborsato/trades"}, {"uid": "github/henry2004y/Vlasiator.jl", "html_url": "https://rseng.github.io/software/repository/github/henry2004y/Vlasiator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/henry2004y/Vlasiator.jl"}, {"uid": "github/blind-contours/CVtreeMLE", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/CVtreeMLE", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/CVtreeMLE"}, {"uid": "github/blind-contours/SuperNOVA", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/SuperNOVA", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/SuperNOVA"}, {"uid": "github/JeffLCoughlin/skye", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/skye", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/skye"}, {"uid": "github/JeffLCoughlin/EphemMatch", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/EphemMatch", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/EphemMatch"}, {"uid": "github/cheginit/HyRiver", "html_url": "https://rseng.github.io/software/repository/github/cheginit/HyRiver", "api_url": "https://rseng.github.io/software/api/repos/github/cheginit/HyRiver"}, {"uid": "github/YeoLab/clipper", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/clipper", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/clipper"}, {"uid": "github/YeoLab/FLARE", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/FLARE"}, {"uid": "github/CadenArmstrong/simuTrans", "html_url": "https://rseng.github.io/software/repository/github/CadenArmstrong/simuTrans", "api_url": "https://rseng.github.io/software/api/repos/github/CadenArmstrong/simuTrans"}, {"uid": "github/Hoeijmakers/tayph", "html_url": "https://rseng.github.io/software/repository/github/Hoeijmakers/tayph", "api_url": "https://rseng.github.io/software/api/repos/github/Hoeijmakers/tayph"}, {"uid": "github/r-cas/caracas", "html_url": "https://rseng.github.io/software/repository/github/r-cas/caracas", "api_url": "https://rseng.github.io/software/api/repos/github/r-cas/caracas"}, {"uid": "github/ot483/NetCom", "html_url": "https://rseng.github.io/software/repository/github/ot483/NetCom", "api_url": "https://rseng.github.io/software/api/repos/github/ot483/NetCom"}, {"uid": "github/agusinac/OmicFlow", "html_url": "https://rseng.github.io/software/repository/github/agusinac/OmicFlow", "api_url": "https://rseng.github.io/software/api/repos/github/agusinac/OmicFlow"}, {"uid": "github/lisadang27/SPCA", "html_url": "https://rseng.github.io/software/repository/github/lisadang27/SPCA", "api_url": "https://rseng.github.io/software/api/repos/github/lisadang27/SPCA"}, {"uid": "github/benvanwerkhoven/kernel_tuner", "html_url": "https://rseng.github.io/software/repository/github/benvanwerkhoven/kernel_tuner", "api_url": "https://rseng.github.io/software/api/repos/github/benvanwerkhoven/kernel_tuner"}, {"uid": "github/sonwell/biotools", "html_url": "https://rseng.github.io/software/repository/github/sonwell/biotools", "api_url": "https://rseng.github.io/software/api/repos/github/sonwell/biotools"}, {"uid": "github/astropatel/twinkle", "html_url": "https://rseng.github.io/software/repository/github/astropatel/twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/astropatel/twinkle"}, {"uid": "github/sing-group/my-brain-seq", "html_url": "https://rseng.github.io/software/repository/github/sing-group/my-brain-seq", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/my-brain-seq"}, {"uid": "github/sing-group/seda", "html_url": "https://rseng.github.io/software/repository/github/sing-group/seda", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/seda"}, {"uid": "github/ethicsai/ethical-smart-grid", "html_url": "https://rseng.github.io/software/repository/github/ethicsai/ethical-smart-grid", "api_url": "https://rseng.github.io/software/api/repos/github/ethicsai/ethical-smart-grid"}, {"uid": "github/nedRad88/SCALAR", "html_url": "https://rseng.github.io/software/repository/github/nedRad88/SCALAR", "api_url": "https://rseng.github.io/software/api/repos/github/nedRad88/SCALAR"}, {"uid": "github/CaNS-World/CaNS-Fizzy", "html_url": "https://rseng.github.io/software/repository/github/CaNS-World/CaNS-Fizzy", "api_url": "https://rseng.github.io/software/api/repos/github/CaNS-World/CaNS-Fizzy"}, {"uid": "github/KTH-Nek5000/UQit", "html_url": "https://rseng.github.io/software/repository/github/KTH-Nek5000/UQit", "api_url": "https://rseng.github.io/software/api/repos/github/KTH-Nek5000/UQit"}, {"uid": "github/MP-Gadget/bigfile", "html_url": "https://rseng.github.io/software/repository/github/MP-Gadget/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/MP-Gadget/bigfile"}, {"uid": "github/aschafu/PSSH2", "html_url": "https://rseng.github.io/software/repository/github/aschafu/PSSH2", "api_url": "https://rseng.github.io/software/api/repos/github/aschafu/PSSH2"}, {"uid": "github/cblakeastro/intensitypower", "html_url": "https://rseng.github.io/software/repository/github/cblakeastro/intensitypower", "api_url": "https://rseng.github.io/software/api/repos/github/cblakeastro/intensitypower"}, {"uid": "github/akdeniz-uzay/A-Track", "html_url": "https://rseng.github.io/software/repository/github/akdeniz-uzay/A-Track", "api_url": "https://rseng.github.io/software/api/repos/github/akdeniz-uzay/A-Track"}, {"uid": "github/dawolfgang/MRrelation", "html_url": "https://rseng.github.io/software/repository/github/dawolfgang/MRrelation", "api_url": "https://rseng.github.io/software/api/repos/github/dawolfgang/MRrelation"}, {"uid": "github/underworldcode/underworld3", "html_url": "https://rseng.github.io/software/repository/github/underworldcode/underworld3", "api_url": "https://rseng.github.io/software/api/repos/github/underworldcode/underworld3"}, {"uid": "github/JuliaHCI/ADI.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHCI/ADI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHCI/ADI.jl"}, {"uid": "github/FoxFortino/ABC-SN", "html_url": "https://rseng.github.io/software/repository/github/FoxFortino/ABC-SN", "api_url": "https://rseng.github.io/software/api/repos/github/FoxFortino/ABC-SN"}, {"uid": "github/p-sira/ellip", "html_url": "https://rseng.github.io/software/repository/github/p-sira/ellip", "api_url": "https://rseng.github.io/software/api/repos/github/p-sira/ellip"}, {"uid": "github/radifar/PyPLIF-HIPPOS", "html_url": "https://rseng.github.io/software/repository/github/radifar/PyPLIF-HIPPOS", "api_url": "https://rseng.github.io/software/api/repos/github/radifar/PyPLIF-HIPPOS"}, {"uid": "github/agorajs/agora-vpsc", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-vpsc", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-vpsc"}, {"uid": "github/agorajs/agora-forbid", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-forbid", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-forbid"}, {"uid": "github/neuralhydrology/neuralhydrology", "html_url": "https://rseng.github.io/software/repository/github/neuralhydrology/neuralhydrology", "api_url": "https://rseng.github.io/software/api/repos/github/neuralhydrology/neuralhydrology"}, {"uid": "github/r-spatial/rgee", "html_url": "https://rseng.github.io/software/repository/github/r-spatial/rgee", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatial/rgee"}, {"uid": "github/HeracleBT/vEMstitch", "html_url": "https://rseng.github.io/software/repository/github/HeracleBT/vEMstitch", "api_url": "https://rseng.github.io/software/api/repos/github/HeracleBT/vEMstitch"}, {"uid": "github/RuthAngus/gprotation", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/gprotation", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/gprotation"}, {"uid": "github/RuthAngus/SIPK2", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/SIPK2", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/SIPK2"}, {"uid": "github/RuthAngus/stardate", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/stardate", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/stardate"}, {"uid": "github/thiago-glissoi/FFF-Line-Segmentation", "html_url": "https://rseng.github.io/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/thiago-glissoi/FFF-Line-Segmentation"}, {"uid": "github/angelmons/landlab", "html_url": "https://rseng.github.io/software/repository/github/angelmons/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/angelmons/landlab"}, {"uid": "github/interactivereport/OmicsView0", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/OmicsView0", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/OmicsView0"}, {"uid": "github/interactivereport/scRNASequest", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/scRNASequest", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/scRNASequest"}, {"uid": "github/benhid/Sequoya", "html_url": "https://rseng.github.io/software/repository/github/benhid/Sequoya", "api_url": "https://rseng.github.io/software/api/repos/github/benhid/Sequoya"}, {"uid": "github/raredd/kmdata", "html_url": "https://rseng.github.io/software/repository/github/raredd/kmdata", "api_url": "https://rseng.github.io/software/api/repos/github/raredd/kmdata"}, {"uid": "github/Smith42/XDF-GAN", "html_url": "https://rseng.github.io/software/repository/github/Smith42/XDF-GAN", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/XDF-GAN"}, {"uid": "github/Smith42/astroPT", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroPT", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroPT"}, {"uid": "github/Smith42/astroddpm", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroddpm", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroddpm"}, {"uid": "github/Smith42/pix2prof", "html_url": "https://rseng.github.io/software/repository/github/Smith42/pix2prof", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/pix2prof"}, {"uid": "github/smsharma/dark-photons-perturbations", "html_url": "https://rseng.github.io/software/repository/github/smsharma/dark-photons-perturbations", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/dark-photons-perturbations"}, {"uid": "github/smsharma/mining-for-substructure-lens", "html_url": "https://rseng.github.io/software/repository/github/smsharma/mining-for-substructure-lens", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/mining-for-substructure-lens"}, {"uid": "github/smsharma/fermi-gce-flows", "html_url": "https://rseng.github.io/software/repository/github/smsharma/fermi-gce-flows", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/fermi-gce-flows"}, {"uid": "github/julianreul/mode_behave", "html_url": "https://rseng.github.io/software/repository/github/julianreul/mode_behave", "api_url": "https://rseng.github.io/software/api/repos/github/julianreul/mode_behave"}, {"uid": "github/ilikecubesnstuff/commensurability", "html_url": "https://rseng.github.io/software/repository/github/ilikecubesnstuff/commensurability", "api_url": "https://rseng.github.io/software/api/repos/github/ilikecubesnstuff/commensurability"}, {"uid": "github/c5shen/TIPP3", "html_url": "https://rseng.github.io/software/repository/github/c5shen/TIPP3", "api_url": "https://rseng.github.io/software/api/repos/github/c5shen/TIPP3"}, {"uid": "github/siavashk/pycpd", "html_url": "https://rseng.github.io/software/repository/github/siavashk/pycpd", "api_url": "https://rseng.github.io/software/api/repos/github/siavashk/pycpd"}, {"uid": "github/MicGrasso/bigonlight", "html_url": "https://rseng.github.io/software/repository/github/MicGrasso/bigonlight", "api_url": "https://rseng.github.io/software/api/repos/github/MicGrasso/bigonlight"}, {"uid": "github/QuantumPlasma/SFQEDtoolkit", "html_url": "https://rseng.github.io/software/repository/github/QuantumPlasma/SFQEDtoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/QuantumPlasma/SFQEDtoolkit"}, {"uid": "github/m-a-d-n-e-s-s/madness", "html_url": "https://rseng.github.io/software/repository/github/m-a-d-n-e-s-s/madness", "api_url": "https://rseng.github.io/software/api/repos/github/m-a-d-n-e-s-s/madness"}, {"uid": "github/biobakery/phylophlan", "html_url": "https://rseng.github.io/software/repository/github/biobakery/phylophlan", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/phylophlan"}, {"uid": "github/biobakery/halla", "html_url": "https://rseng.github.io/software/repository/github/biobakery/halla", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/halla"}, {"uid": "github/biobakery/MetaPhlAn", "html_url": "https://rseng.github.io/software/repository/github/biobakery/MetaPhlAn", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/MetaPhlAn"}, {"uid": "github/Brauckhoff/biopixR", "html_url": "https://rseng.github.io/software/repository/github/Brauckhoff/biopixR", "api_url": "https://rseng.github.io/software/api/repos/github/Brauckhoff/biopixR"}, {"uid": "github/healpy/healpy", "html_url": "https://rseng.github.io/software/repository/github/healpy/healpy", "api_url": "https://rseng.github.io/software/api/repos/github/healpy/healpy"}, {"uid": "github/learningsimulator/learningsimulator", "html_url": "https://rseng.github.io/software/repository/github/learningsimulator/learningsimulator", "api_url": "https://rseng.github.io/software/api/repos/github/learningsimulator/learningsimulator"}, {"uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "html_url": "https://rseng.github.io/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "api_url": "https://rseng.github.io/software/api/repos/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images"}, {"uid": "github/rpoleski/MulensModel", "html_url": "https://rseng.github.io/software/repository/github/rpoleski/MulensModel", "api_url": "https://rseng.github.io/software/api/repos/github/rpoleski/MulensModel"}, {"uid": "github/selkamand/ggoncoplot", "html_url": "https://rseng.github.io/software/repository/github/selkamand/ggoncoplot", "api_url": "https://rseng.github.io/software/api/repos/github/selkamand/ggoncoplot"}, {"uid": "github/yesint/EnCurv", "html_url": "https://rseng.github.io/software/repository/github/yesint/EnCurv", "api_url": "https://rseng.github.io/software/api/repos/github/yesint/EnCurv"}, {"uid": "github/HHTpy/HHTpywrapper", "html_url": "https://rseng.github.io/software/repository/github/HHTpy/HHTpywrapper", "api_url": "https://rseng.github.io/software/api/repos/github/HHTpy/HHTpywrapper"}, {"uid": "github/Azeret/galIMF", "html_url": "https://rseng.github.io/software/repository/github/Azeret/galIMF", "api_url": "https://rseng.github.io/software/api/repos/github/Azeret/galIMF"}, {"uid": "github/yuhaoran/CUBE", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE"}, {"uid": "github/yuhaoran/CUBE2", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE2", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE2"}, {"uid": "github/bjmt/universalmotif", "html_url": "https://rseng.github.io/software/repository/github/bjmt/universalmotif", "api_url": "https://rseng.github.io/software/api/repos/github/bjmt/universalmotif"}, {"uid": "github/METHODS-Group/DRDMannTurb", "html_url": "https://rseng.github.io/software/repository/github/METHODS-Group/DRDMannTurb", "api_url": "https://rseng.github.io/software/api/repos/github/METHODS-Group/DRDMannTurb"}, {"uid": "github/joacoh/wise2mbh", "html_url": "https://rseng.github.io/software/repository/github/joacoh/wise2mbh", "api_url": "https://rseng.github.io/software/api/repos/github/joacoh/wise2mbh"}, {"uid": "github/camfort/fortran-src", "html_url": "https://rseng.github.io/software/repository/github/camfort/fortran-src", "api_url": "https://rseng.github.io/software/api/repos/github/camfort/fortran-src"}, {"uid": "github/JungleComputing/rocket", "html_url": "https://rseng.github.io/software/repository/github/JungleComputing/rocket", "api_url": "https://rseng.github.io/software/api/repos/github/JungleComputing/rocket"}, {"uid": "github/ICAMS/strucscan", "html_url": "https://rseng.github.io/software/repository/github/ICAMS/strucscan", "api_url": "https://rseng.github.io/software/api/repos/github/ICAMS/strucscan"}, {"uid": "github/BiostatOmics/MORE", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/MORE", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/MORE"}, {"uid": "github/BiostatOmics/Coxmos", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/Coxmos", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/Coxmos"}, {"uid": "github/BioHPC/MegaD", "html_url": "https://rseng.github.io/software/repository/github/BioHPC/MegaD", "api_url": "https://rseng.github.io/software/api/repos/github/BioHPC/MegaD"}, {"uid": "github/dparks1134/RefineM", "html_url": "https://rseng.github.io/software/repository/github/dparks1134/RefineM", "api_url": "https://rseng.github.io/software/api/repos/github/dparks1134/RefineM"}, {"uid": "github/baiyueh/PANINIpy", "html_url": "https://rseng.github.io/software/repository/github/baiyueh/PANINIpy", "api_url": "https://rseng.github.io/software/api/repos/github/baiyueh/PANINIpy"}, {"uid": "github/markusbonse/applefy", "html_url": "https://rseng.github.io/software/repository/github/markusbonse/applefy", "api_url": "https://rseng.github.io/software/api/repos/github/markusbonse/applefy"}, {"uid": "github/XGI-MSU/WDMWaveletTransforms", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/WDMWaveletTransforms", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/WDMWaveletTransforms"}, {"uid": "github/XGI-MSU/PyIMRPhenomD", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/PyIMRPhenomD", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/PyIMRPhenomD"}, {"uid": "github/Circuitscape/Omniscape.jl", "html_url": "https://rseng.github.io/software/repository/github/Circuitscape/Omniscape.jl", "api_url": "https://rseng.github.io/software/api/repos/github/Circuitscape/Omniscape.jl"}, {"uid": "github/SofieVG/FlowSOM", "html_url": "https://rseng.github.io/software/repository/github/SofieVG/FlowSOM", "api_url": "https://rseng.github.io/software/api/repos/github/SofieVG/FlowSOM"}, {"uid": "github/gmorras/pyEFPE", "html_url": "https://rseng.github.io/software/repository/github/gmorras/pyEFPE", "api_url": "https://rseng.github.io/software/api/repos/github/gmorras/pyEFPE"}, {"uid": "github/alexrhowe/APOLLO", "html_url": "https://rseng.github.io/software/repository/github/alexrhowe/APOLLO", "api_url": "https://rseng.github.io/software/api/repos/github/alexrhowe/APOLLO"}, {"uid": "github/opimwue/ddop", "html_url": "https://rseng.github.io/software/repository/github/opimwue/ddop", "api_url": "https://rseng.github.io/software/api/repos/github/opimwue/ddop"}, {"uid": "github/Joost987/MONDPMesh", "html_url": "https://rseng.github.io/software/repository/github/Joost987/MONDPMesh", "api_url": "https://rseng.github.io/software/api/repos/github/Joost987/MONDPMesh"}, {"uid": "github/NicolasHug/Surprise", "html_url": "https://rseng.github.io/software/repository/github/NicolasHug/Surprise", "api_url": "https://rseng.github.io/software/api/repos/github/NicolasHug/Surprise"}, {"uid": "github/rnajena/sugar", "html_url": "https://rseng.github.io/software/repository/github/rnajena/sugar", "api_url": "https://rseng.github.io/software/api/repos/github/rnajena/sugar"}, {"uid": "github/ElectionDataAnalysis/electiondata", "html_url": "https://rseng.github.io/software/repository/github/ElectionDataAnalysis/electiondata", "api_url": "https://rseng.github.io/software/api/repos/github/ElectionDataAnalysis/electiondata"}, {"uid": "github/legolason/PyQSOFit", "html_url": "https://rseng.github.io/software/repository/github/legolason/PyQSOFit", "api_url": "https://rseng.github.io/software/api/repos/github/legolason/PyQSOFit"}, {"uid": "github/catboost/catboost", "html_url": "https://rseng.github.io/software/repository/github/catboost/catboost", "api_url": "https://rseng.github.io/software/api/repos/github/catboost/catboost"}, {"uid": "github/wiederm/transformato", "html_url": "https://rseng.github.io/software/repository/github/wiederm/transformato", "api_url": "https://rseng.github.io/software/api/repos/github/wiederm/transformato"}, {"uid": "github/shangguandong1996/FindIT2", "html_url": "https://rseng.github.io/software/repository/github/shangguandong1996/FindIT2", "api_url": "https://rseng.github.io/software/api/repos/github/shangguandong1996/FindIT2"}, {"uid": "github/icbm-iupui/STAFF", "html_url": "https://rseng.github.io/software/repository/github/icbm-iupui/STAFF", "api_url": "https://rseng.github.io/software/api/repos/github/icbm-iupui/STAFF"}, {"uid": "github/ELeeAstro/mini_chem", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/mini_chem", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/mini_chem"}, {"uid": "github/ELeeAstro/gCMCRT", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/gCMCRT", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/gCMCRT"}, {"uid": "github/wrenfold/wrenfold", "html_url": "https://rseng.github.io/software/repository/github/wrenfold/wrenfold", "api_url": "https://rseng.github.io/software/api/repos/github/wrenfold/wrenfold"}, {"uid": "github/AstarVienna/AnisoCADO", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/AnisoCADO", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/AnisoCADO"}, {"uid": "github/AstarVienna/ScopeSim_Templates", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/ScopeSim_Templates", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/ScopeSim_Templates"}, {"uid": "github/AstarVienna/Pyckles", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/Pyckles", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/Pyckles"}, {"uid": "github/AstarVienna/irdb", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/irdb", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/irdb"}, {"uid": "github/AstarVienna/skycalc_ipy", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/skycalc_ipy", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/skycalc_ipy"}, {"uid": "github/ejhigson/dyPolyChord", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/dyPolyChord", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/dyPolyChord"}, {"uid": "github/ejhigson/nestcheck", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/nestcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/nestcheck"}, {"uid": "github/ejhigson/perfectns", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/perfectns", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/perfectns"}, {"uid": "github/hippalectryon-0/pyloggrid", "html_url": "https://rseng.github.io/software/repository/github/hippalectryon-0/pyloggrid", "api_url": "https://rseng.github.io/software/api/repos/github/hippalectryon-0/pyloggrid"}, {"uid": "github/BleekerLab/PhenoFeatureFinder", "html_url": "https://rseng.github.io/software/repository/github/BleekerLab/PhenoFeatureFinder", "api_url": "https://rseng.github.io/software/api/repos/github/BleekerLab/PhenoFeatureFinder"}, {"uid": "github/lifs-tools/jmzTab-m", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/jmzTab-m", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/jmzTab-m"}, {"uid": "github/lifs-tools/goslin", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/goslin", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/goslin"}, {"uid": "github/aidenlab/juicer", "html_url": "https://rseng.github.io/software/repository/github/aidenlab/juicer", "api_url": "https://rseng.github.io/software/api/repos/github/aidenlab/juicer"}, {"uid": "github/tjiangHIT/cuteSV", "html_url": "https://rseng.github.io/software/repository/github/tjiangHIT/cuteSV", "api_url": "https://rseng.github.io/software/api/repos/github/tjiangHIT/cuteSV"}, {"uid": "github/nuclear-multimessenger-astronomy/nmma", "html_url": "https://rseng.github.io/software/repository/github/nuclear-multimessenger-astronomy/nmma", "api_url": "https://rseng.github.io/software/api/repos/github/nuclear-multimessenger-astronomy/nmma"}, {"uid": "github/chombo-discharge/chombo-discharge", "html_url": "https://rseng.github.io/software/repository/github/chombo-discharge/chombo-discharge", "api_url": "https://rseng.github.io/software/api/repos/github/chombo-discharge/chombo-discharge"}, {"uid": "github/ypmen/PulsarX", "html_url": "https://rseng.github.io/software/repository/github/ypmen/PulsarX", "api_url": "https://rseng.github.io/software/api/repos/github/ypmen/PulsarX"}, {"uid": "github/dmilakovic/QSOSIM10", "html_url": "https://rseng.github.io/software/repository/github/dmilakovic/QSOSIM10", "api_url": "https://rseng.github.io/software/api/repos/github/dmilakovic/QSOSIM10"}, {"uid": "github/MIT-LAE/TASOPT.jl", "html_url": "https://rseng.github.io/software/repository/github/MIT-LAE/TASOPT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-LAE/TASOPT.jl"}, {"uid": "github/jcibanezm/DustCharge", "html_url": "https://rseng.github.io/software/repository/github/jcibanezm/DustCharge", "api_url": "https://rseng.github.io/software/api/repos/github/jcibanezm/DustCharge"}, {"uid": "github/ComparativeGenomicsToolkit/cactus", "html_url": "https://rseng.github.io/software/repository/github/ComparativeGenomicsToolkit/cactus", "api_url": "https://rseng.github.io/software/api/repos/github/ComparativeGenomicsToolkit/cactus"}, {"uid": "github/twesterhout/lattice-symmetries", "html_url": "https://rseng.github.io/software/repository/github/twesterhout/lattice-symmetries", "api_url": "https://rseng.github.io/software/api/repos/github/twesterhout/lattice-symmetries"}, {"uid": "github/the-rccg/hw2d", "html_url": "https://rseng.github.io/software/repository/github/the-rccg/hw2d", "api_url": "https://rseng.github.io/software/api/repos/github/the-rccg/hw2d"}, {"uid": "github/desihub/fastspecfit", "html_url": "https://rseng.github.io/software/repository/github/desihub/fastspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/fastspecfit"}, {"uid": "github/desihub/desitarget", "html_url": "https://rseng.github.io/software/repository/github/desihub/desitarget", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/desitarget"}, {"uid": "github/torrance/pigi", "html_url": "https://rseng.github.io/software/repository/github/torrance/pigi", "api_url": "https://rseng.github.io/software/api/repos/github/torrance/pigi"}, {"uid": "github/RECETOX/RIAssigner", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/RIAssigner", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/RIAssigner"}, {"uid": "github/RECETOX/MSMetaEnhancer", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/MSMetaEnhancer", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/MSMetaEnhancer"}, {"uid": "github/RECETOX/recetox-aplcms", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-aplcms", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-aplcms"}, {"uid": "github/RECETOX/recetox-msfinder", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-msfinder", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-msfinder"}, {"uid": "github/RECETOX/recetox-xMSannotator", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-xMSannotator", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-xMSannotator"}, {"uid": "github/RECETOX/wtv", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/wtv", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/wtv"}, {"uid": "github/fabian-sp/GGLasso", "html_url": "https://rseng.github.io/software/repository/github/fabian-sp/GGLasso", "api_url": "https://rseng.github.io/software/api/repos/github/fabian-sp/GGLasso"}, {"uid": "github/frank1010111/pywaterflood", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/pywaterflood", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/pywaterflood"}, {"uid": "github/frank1010111/bluebonnet", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/bluebonnet", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/bluebonnet"}, {"uid": "github/hcdenbakker/sepia", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/sepia", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/sepia"}, {"uid": "github/hcdenbakker/SalmID", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/SalmID", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/SalmID"}, {"uid": "github/azizka/IUCNN", "html_url": "https://rseng.github.io/software/repository/github/azizka/IUCNN", "api_url": "https://rseng.github.io/software/api/repos/github/azizka/IUCNN"}, {"uid": "github/ClapeyronThermo/GCIdentifier.jl", "html_url": "https://rseng.github.io/software/repository/github/ClapeyronThermo/GCIdentifier.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ClapeyronThermo/GCIdentifier.jl"}, {"uid": "github/tahirulqamar/Deep-HPI-pred", "html_url": "https://rseng.github.io/software/repository/github/tahirulqamar/Deep-HPI-pred", "api_url": "https://rseng.github.io/software/api/repos/github/tahirulqamar/Deep-HPI-pred"}, {"uid": "github/alawryaguila/multi-view-AE", "html_url": "https://rseng.github.io/software/repository/github/alawryaguila/multi-view-AE", "api_url": "https://rseng.github.io/software/api/repos/github/alawryaguila/multi-view-AE"}, {"uid": "github/kuadrat/data_slicer", "html_url": "https://rseng.github.io/software/repository/github/kuadrat/data_slicer", "api_url": "https://rseng.github.io/software/api/repos/github/kuadrat/data_slicer"}, {"uid": "github/openneuropet/PET2BIDS", "html_url": "https://rseng.github.io/software/repository/github/openneuropet/PET2BIDS", "api_url": "https://rseng.github.io/software/api/repos/github/openneuropet/PET2BIDS"}, {"uid": "github/thieu1995/permetrics", "html_url": "https://rseng.github.io/software/repository/github/thieu1995/permetrics", "api_url": "https://rseng.github.io/software/api/repos/github/thieu1995/permetrics"}, {"uid": "github/AdrianA-T/cytomorph", "html_url": "https://rseng.github.io/software/repository/github/AdrianA-T/cytomorph", "api_url": "https://rseng.github.io/software/api/repos/github/AdrianA-T/cytomorph"}, {"uid": "github/Zafiirah13/meercrab", "html_url": "https://rseng.github.io/software/repository/github/Zafiirah13/meercrab", "api_url": "https://rseng.github.io/software/api/repos/github/Zafiirah13/meercrab"}, {"uid": "github/MoreiraLAB/or", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/or", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/or"}, {"uid": "github/MoreiraLAB/mensadb-open", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/mensadb-open", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/mensadb-open"}, {"uid": "github/mattpitkin/psrqpy", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/psrqpy", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/psrqpy"}, {"uid": "github/mattpitkin/lintegrate", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/lintegrate", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/lintegrate"}, {"uid": "github/jeertmans/DiffeRT2d", "html_url": "https://rseng.github.io/software/repository/github/jeertmans/DiffeRT2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeertmans/DiffeRT2d"}, {"uid": "github/CLIMADA-project/climada_python", "html_url": "https://rseng.github.io/software/repository/github/CLIMADA-project/climada_python", "api_url": "https://rseng.github.io/software/api/repos/github/CLIMADA-project/climada_python"}, {"uid": "github/antoinemarchal/ROHSA", "html_url": "https://rseng.github.io/software/repository/github/antoinemarchal/ROHSA", "api_url": "https://rseng.github.io/software/api/repos/github/antoinemarchal/ROHSA"}, {"uid": "github/phitterio/phitter-kernel", "html_url": "https://rseng.github.io/software/repository/github/phitterio/phitter-kernel", "api_url": "https://rseng.github.io/software/api/repos/github/phitterio/phitter-kernel"}, {"uid": "github/somefunAgba/NLSIG-COVID19Lab", "html_url": "https://rseng.github.io/software/repository/github/somefunAgba/NLSIG-COVID19Lab", "api_url": "https://rseng.github.io/software/api/repos/github/somefunAgba/NLSIG-COVID19Lab"}, {"uid": "github/nichollsh/AGNI", "html_url": "https://rseng.github.io/software/repository/github/nichollsh/AGNI", "api_url": "https://rseng.github.io/software/api/repos/github/nichollsh/AGNI"}, {"uid": "github/GalletFlorian/TATOO", "html_url": "https://rseng.github.io/software/repository/github/GalletFlorian/TATOO", "api_url": "https://rseng.github.io/software/api/repos/github/GalletFlorian/TATOO"}, {"uid": "github/arvados/arvados", "html_url": "https://rseng.github.io/software/repository/github/arvados/arvados", "api_url": "https://rseng.github.io/software/api/repos/github/arvados/arvados"}, {"uid": "github/mwess/miit", "html_url": "https://rseng.github.io/software/repository/github/mwess/miit", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/miit"}, {"uid": "github/mwess/GreedyFHist", "html_url": "https://rseng.github.io/software/repository/github/mwess/GreedyFHist", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/GreedyFHist"}, {"uid": "github/AStcherbinine/omegapy", "html_url": "https://rseng.github.io/software/repository/github/AStcherbinine/omegapy", "api_url": "https://rseng.github.io/software/api/repos/github/AStcherbinine/omegapy"}, {"uid": "github/rickhelmus/patRoon", "html_url": "https://rseng.github.io/software/repository/github/rickhelmus/patRoon", "api_url": "https://rseng.github.io/software/api/repos/github/rickhelmus/patRoon"}, {"uid": "github/AMICI-dev/AMICI", "html_url": "https://rseng.github.io/software/repository/github/AMICI-dev/AMICI", "api_url": "https://rseng.github.io/software/api/repos/github/AMICI-dev/AMICI"}, {"uid": "github/dokester/BayesicFitting", "html_url": "https://rseng.github.io/software/repository/github/dokester/BayesicFitting", "api_url": "https://rseng.github.io/software/api/repos/github/dokester/BayesicFitting"}, {"uid": "github/MilesCranmer/PySR", "html_url": "https://rseng.github.io/software/repository/github/MilesCranmer/PySR", "api_url": "https://rseng.github.io/software/api/repos/github/MilesCranmer/PySR"}, {"uid": "github/logan-pearce/lofti_gaia", "html_url": "https://rseng.github.io/software/repository/github/logan-pearce/lofti_gaia", "api_url": "https://rseng.github.io/software/api/repos/github/logan-pearce/lofti_gaia"}, {"uid": "github/hansenjohnson/WhaleMap", "html_url": "https://rseng.github.io/software/repository/github/hansenjohnson/WhaleMap", "api_url": "https://rseng.github.io/software/api/repos/github/hansenjohnson/WhaleMap"}, {"uid": "github/mlujnie/simple", "html_url": "https://rseng.github.io/software/repository/github/mlujnie/simple", "api_url": "https://rseng.github.io/software/api/repos/github/mlujnie/simple"}, {"uid": "github/Collab4exaNBody/exaDEM", "html_url": "https://rseng.github.io/software/repository/github/Collab4exaNBody/exaDEM", "api_url": "https://rseng.github.io/software/api/repos/github/Collab4exaNBody/exaDEM"}, {"uid": "github/SimVascular/svZeroDSolver", "html_url": "https://rseng.github.io/software/repository/github/SimVascular/svZeroDSolver", "api_url": "https://rseng.github.io/software/api/repos/github/SimVascular/svZeroDSolver"}, {"uid": "github/lauralwatkins/cjam", "html_url": "https://rseng.github.io/software/repository/github/lauralwatkins/cjam", "api_url": "https://rseng.github.io/software/api/repos/github/lauralwatkins/cjam"}, {"uid": "github/esa/NIDN", "html_url": "https://rseng.github.io/software/repository/github/esa/NIDN", "api_url": "https://rseng.github.io/software/api/repos/github/esa/NIDN"}, {"uid": "github/esa/polyhedral-gravity-model", "html_url": "https://rseng.github.io/software/repository/github/esa/polyhedral-gravity-model", "api_url": "https://rseng.github.io/software/api/repos/github/esa/polyhedral-gravity-model"}, {"uid": "github/esa/pagmo2-paper", "html_url": "https://rseng.github.io/software/repository/github/esa/pagmo2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/esa/pagmo2-paper"}, {"uid": "github/cbio-astar-tools/GeneCloudOmics", "html_url": "https://rseng.github.io/software/repository/github/cbio-astar-tools/GeneCloudOmics", "api_url": "https://rseng.github.io/software/api/repos/github/cbio-astar-tools/GeneCloudOmics"}, {"uid": "github/fforster/delight", "html_url": "https://rseng.github.io/software/repository/github/fforster/delight", "api_url": "https://rseng.github.io/software/api/repos/github/fforster/delight"}, {"uid": "github/ERPI-UL/HELP-VRclient", "html_url": "https://rseng.github.io/software/repository/github/ERPI-UL/HELP-VRclient", "api_url": "https://rseng.github.io/software/api/repos/github/ERPI-UL/HELP-VRclient"}, {"uid": "github/cbrnr/sigviewer", "html_url": "https://rseng.github.io/software/repository/github/cbrnr/sigviewer", "api_url": "https://rseng.github.io/software/api/repos/github/cbrnr/sigviewer"}, {"uid": "github/obreschkow/dftools", "html_url": "https://rseng.github.io/software/repository/github/obreschkow/dftools", "api_url": "https://rseng.github.io/software/api/repos/github/obreschkow/dftools"}, {"uid": "github/jendelel/PrankWebApp", "html_url": "https://rseng.github.io/software/repository/github/jendelel/PrankWebApp", "api_url": "https://rseng.github.io/software/api/repos/github/jendelel/PrankWebApp"}, {"uid": "github/ptaconet/modisfast", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/modisfast", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/modisfast"}, {"uid": "github/ptaconet/bdd_rntaaf", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/bdd_rntaaf", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/bdd_rntaaf"}, {"uid": "github/CastillonMiguel/phasefieldx", "html_url": "https://rseng.github.io/software/repository/github/CastillonMiguel/phasefieldx", "api_url": "https://rseng.github.io/software/api/repos/github/CastillonMiguel/phasefieldx"}, {"uid": "github/genostats/LowKi", "html_url": "https://rseng.github.io/software/repository/github/genostats/LowKi", "api_url": "https://rseng.github.io/software/api/repos/github/genostats/LowKi"}, {"uid": "github/vincentvaneylen/k2photometry", "html_url": "https://rseng.github.io/software/repository/github/vincentvaneylen/k2photometry", "api_url": "https://rseng.github.io/software/api/repos/github/vincentvaneylen/k2photometry"}, {"uid": "github/drupke/ifsred", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsred", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsred"}, {"uid": "github/drupke/questfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/questfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/questfit"}, {"uid": "github/drupke/ifsfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsfit"}, {"uid": "github/carlosborca/CrystaLattE", "html_url": "https://rseng.github.io/software/repository/github/carlosborca/CrystaLattE", "api_url": "https://rseng.github.io/software/api/repos/github/carlosborca/CrystaLattE"}, {"uid": "github/dirostri/CREPE", "html_url": "https://rseng.github.io/software/repository/github/dirostri/CREPE", "api_url": "https://rseng.github.io/software/api/repos/github/dirostri/CREPE"}, {"uid": "github/AdmiralenOla/Scoary", "html_url": "https://rseng.github.io/software/repository/github/AdmiralenOla/Scoary", "api_url": "https://rseng.github.io/software/api/repos/github/AdmiralenOla/Scoary"}, {"uid": "github/gogetdata/ggd-utils", "html_url": "https://rseng.github.io/software/repository/github/gogetdata/ggd-utils", "api_url": "https://rseng.github.io/software/api/repos/github/gogetdata/ggd-utils"}, {"uid": "github/PixelgenTechnologies/pixelator", "html_url": "https://rseng.github.io/software/repository/github/PixelgenTechnologies/pixelator", "api_url": "https://rseng.github.io/software/api/repos/github/PixelgenTechnologies/pixelator"}, {"uid": "github/nevrome/bleiglas", "html_url": "https://rseng.github.io/software/repository/github/nevrome/bleiglas", "api_url": "https://rseng.github.io/software/api/repos/github/nevrome/bleiglas"}, {"uid": "github/SKA-INAF/caesar-rest", "html_url": "https://rseng.github.io/software/repository/github/SKA-INAF/caesar-rest", "api_url": "https://rseng.github.io/software/api/repos/github/SKA-INAF/caesar-rest"}, {"uid": "github/mathLab/PINA", "html_url": "https://rseng.github.io/software/repository/github/mathLab/PINA", "api_url": "https://rseng.github.io/software/api/repos/github/mathLab/PINA"}, {"uid": "github/wtsi-hpag/HiLine", "html_url": "https://rseng.github.io/software/repository/github/wtsi-hpag/HiLine", "api_url": "https://rseng.github.io/software/api/repos/github/wtsi-hpag/HiLine"}, {"uid": "github/maximewack/viroCapt", "html_url": "https://rseng.github.io/software/repository/github/maximewack/viroCapt", "api_url": "https://rseng.github.io/software/api/repos/github/maximewack/viroCapt"}, {"uid": "github/alejandroaviles/fkpt", "html_url": "https://rseng.github.io/software/repository/github/alejandroaviles/fkpt", "api_url": "https://rseng.github.io/software/api/repos/github/alejandroaviles/fkpt"}, {"uid": "github/fannyhb/fargene", "html_url": "https://rseng.github.io/software/repository/github/fannyhb/fargene", "api_url": "https://rseng.github.io/software/api/repos/github/fannyhb/fargene"}, {"uid": "github/chklovski/CheckM2", "html_url": "https://rseng.github.io/software/repository/github/chklovski/CheckM2", "api_url": "https://rseng.github.io/software/api/repos/github/chklovski/CheckM2"}, {"uid": "github/mamartinod/grip-nulling", "html_url": "https://rseng.github.io/software/repository/github/mamartinod/grip-nulling", "api_url": "https://rseng.github.io/software/api/repos/github/mamartinod/grip-nulling"}, {"uid": "github/deeprob/ThioesteraseEnzymeSpecificity", "html_url": "https://rseng.github.io/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", "api_url": "https://rseng.github.io/software/api/repos/github/deeprob/ThioesteraseEnzymeSpecificity"}, {"uid": "github/ladsantos/p-winds", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/p-winds", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/p-winds"}, {"uid": "github/ladsantos/flatstar", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/flatstar", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/flatstar"}, {"uid": "github/shikhar249/OnionMHC", "html_url": "https://rseng.github.io/software/repository/github/shikhar249/OnionMHC", "api_url": "https://rseng.github.io/software/api/repos/github/shikhar249/OnionMHC"}, {"uid": "github/binzhulab/SUITOR", "html_url": "https://rseng.github.io/software/repository/github/binzhulab/SUITOR", "api_url": "https://rseng.github.io/software/api/repos/github/binzhulab/SUITOR"}, {"uid": "github/b-pardi/BraTaDio", "html_url": "https://rseng.github.io/software/repository/github/b-pardi/BraTaDio", "api_url": "https://rseng.github.io/software/api/repos/github/b-pardi/BraTaDio"}, {"uid": "github/tariks/peakachu", "html_url": "https://rseng.github.io/software/repository/github/tariks/peakachu", "api_url": "https://rseng.github.io/software/api/repos/github/tariks/peakachu"}, {"uid": "github/cgarraffo/StelNet", "html_url": "https://rseng.github.io/software/repository/github/cgarraffo/StelNet", "api_url": "https://rseng.github.io/software/api/repos/github/cgarraffo/StelNet"}, {"uid": "github/indralab/pybiopax", "html_url": "https://rseng.github.io/software/repository/github/indralab/pybiopax", "api_url": "https://rseng.github.io/software/api/repos/github/indralab/pybiopax"}, {"uid": "github/NuGrid/NuPyCEE", "html_url": "https://rseng.github.io/software/repository/github/NuGrid/NuPyCEE", "api_url": "https://rseng.github.io/software/api/repos/github/NuGrid/NuPyCEE"}, {"uid": "github/curl/curl", "html_url": "https://rseng.github.io/software/repository/github/curl/curl", "api_url": "https://rseng.github.io/software/api/repos/github/curl/curl"}, {"uid": "github/galkintool/galkin", "html_url": "https://rseng.github.io/software/repository/github/galkintool/galkin", "api_url": "https://rseng.github.io/software/api/repos/github/galkintool/galkin"}, {"uid": "github/AntoineDarveau/jwst", "html_url": "https://rseng.github.io/software/repository/github/AntoineDarveau/jwst", "api_url": "https://rseng.github.io/software/api/repos/github/AntoineDarveau/jwst"}, {"uid": "github/kazewong/flowMC", "html_url": "https://rseng.github.io/software/repository/github/kazewong/flowMC", "api_url": "https://rseng.github.io/software/api/repos/github/kazewong/flowMC"}, {"uid": "github/tripathi/Atmospheric-Athena", "html_url": "https://rseng.github.io/software/repository/github/tripathi/Atmospheric-Athena", "api_url": "https://rseng.github.io/software/api/repos/github/tripathi/Atmospheric-Athena"}, {"uid": "github/ialbert/genescape-central", "html_url": "https://rseng.github.io/software/repository/github/ialbert/genescape-central", "api_url": "https://rseng.github.io/software/api/repos/github/ialbert/genescape-central"}, {"uid": "github/ageller/firefly", "html_url": "https://rseng.github.io/software/repository/github/ageller/firefly", "api_url": "https://rseng.github.io/software/api/repos/github/ageller/firefly"}, {"uid": "github/Libensemble/libensemble", "html_url": "https://rseng.github.io/software/repository/github/Libensemble/libensemble", "api_url": "https://rseng.github.io/software/api/repos/github/Libensemble/libensemble"}, {"uid": "github/spicy-oil/hfs_fit", "html_url": "https://rseng.github.io/software/repository/github/spicy-oil/hfs_fit", "api_url": "https://rseng.github.io/software/api/repos/github/spicy-oil/hfs_fit"}, {"uid": "github/pmelsted/pizzly", "html_url": "https://rseng.github.io/software/repository/github/pmelsted/pizzly", "api_url": "https://rseng.github.io/software/api/repos/github/pmelsted/pizzly"}, {"uid": "github/ericcombiolab/LRTK", "html_url": "https://rseng.github.io/software/repository/github/ericcombiolab/LRTK", "api_url": "https://rseng.github.io/software/api/repos/github/ericcombiolab/LRTK"}, {"uid": "github/liangcheng-hrbmu/EnrichDO", "html_url": "https://rseng.github.io/software/repository/github/liangcheng-hrbmu/EnrichDO", "api_url": "https://rseng.github.io/software/api/repos/github/liangcheng-hrbmu/EnrichDO"}, {"uid": "github/McMahonCosmologyGroup/holosim-ml", "html_url": "https://rseng.github.io/software/repository/github/McMahonCosmologyGroup/holosim-ml", "api_url": "https://rseng.github.io/software/api/repos/github/McMahonCosmologyGroup/holosim-ml"}, {"uid": "github/pylops/pyproximal", "html_url": "https://rseng.github.io/software/repository/github/pylops/pyproximal", "api_url": "https://rseng.github.io/software/api/repos/github/pylops/pyproximal"}, {"uid": "github/pavanvidem/chira", "html_url": "https://rseng.github.io/software/repository/github/pavanvidem/chira", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvidem/chira"}, {"uid": "github/jameschapman19/cca_zoo", "html_url": "https://rseng.github.io/software/repository/github/jameschapman19/cca_zoo", "api_url": "https://rseng.github.io/software/api/repos/github/jameschapman19/cca_zoo"}, {"uid": "github/vmalnathnambiar/exfilms", "html_url": "https://rseng.github.io/software/repository/github/vmalnathnambiar/exfilms", "api_url": "https://rseng.github.io/software/api/repos/github/vmalnathnambiar/exfilms"}, {"uid": "github/tloredo/CUDAHM", "html_url": "https://rseng.github.io/software/repository/github/tloredo/CUDAHM", "api_url": "https://rseng.github.io/software/api/repos/github/tloredo/CUDAHM"}, {"uid": "github/neuromodulation/py_neuromodulation", "html_url": "https://rseng.github.io/software/repository/github/neuromodulation/py_neuromodulation", "api_url": "https://rseng.github.io/software/api/repos/github/neuromodulation/py_neuromodulation"}, {"uid": "github/pokynmr/ipick", "html_url": "https://rseng.github.io/software/repository/github/pokynmr/ipick", "api_url": "https://rseng.github.io/software/api/repos/github/pokynmr/ipick"}, {"uid": "github/PynPoint/PynPoint", "html_url": "https://rseng.github.io/software/repository/github/PynPoint/PynPoint", "api_url": "https://rseng.github.io/software/api/repos/github/PynPoint/PynPoint"}, {"uid": "github/ylab-hi/ScanITD", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanITD", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanITD"}, {"uid": "github/ylab-hi/ScanExitronLR", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanExitronLR", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanExitronLR"}, {"uid": "github/marco-oliva/pfp", "html_url": "https://rseng.github.io/software/repository/github/marco-oliva/pfp", "api_url": "https://rseng.github.io/software/api/repos/github/marco-oliva/pfp"}, {"uid": "github/MarcNeveu/IcyDwarf", "html_url": "https://rseng.github.io/software/repository/github/MarcNeveu/IcyDwarf", "api_url": "https://rseng.github.io/software/api/repos/github/MarcNeveu/IcyDwarf"}, {"uid": "github/SpaceOdyssey/Blobby3D", "html_url": "https://rseng.github.io/software/repository/github/SpaceOdyssey/Blobby3D", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceOdyssey/Blobby3D"}, {"uid": "github/bthorne93/PySM_public", "html_url": "https://rseng.github.io/software/repository/github/bthorne93/PySM_public", "api_url": "https://rseng.github.io/software/api/repos/github/bthorne93/PySM_public"}, {"uid": "github/flosalbizziae/kataegis", "html_url": "https://rseng.github.io/software/repository/github/flosalbizziae/kataegis", "api_url": "https://rseng.github.io/software/api/repos/github/flosalbizziae/kataegis"}, {"uid": "github/mroosmalen/nanosv", "html_url": "https://rseng.github.io/software/repository/github/mroosmalen/nanosv", "api_url": "https://rseng.github.io/software/api/repos/github/mroosmalen/nanosv"}, {"uid": "github/seeh/surprise", "html_url": "https://rseng.github.io/software/repository/github/seeh/surprise", "api_url": "https://rseng.github.io/software/api/repos/github/seeh/surprise"}, {"uid": "github/timothyas/xesn", "html_url": "https://rseng.github.io/software/repository/github/timothyas/xesn", "api_url": "https://rseng.github.io/software/api/repos/github/timothyas/xesn"}, {"uid": "github/mslonina/Mechanic", "html_url": "https://rseng.github.io/software/repository/github/mslonina/Mechanic", "api_url": "https://rseng.github.io/software/api/repos/github/mslonina/Mechanic"}, {"uid": "github/SynxFlow/SynxFlow", "html_url": "https://rseng.github.io/software/repository/github/SynxFlow/SynxFlow", "api_url": "https://rseng.github.io/software/api/repos/github/SynxFlow/SynxFlow"}, {"uid": "github/EIT-ALIVE/eitprocessing", "html_url": "https://rseng.github.io/software/repository/github/EIT-ALIVE/eitprocessing", "api_url": "https://rseng.github.io/software/api/repos/github/EIT-ALIVE/eitprocessing"}, {"uid": "github/ConorMacBride/mcalf", "html_url": "https://rseng.github.io/software/repository/github/ConorMacBride/mcalf", "api_url": "https://rseng.github.io/software/api/repos/github/ConorMacBride/mcalf"}, {"uid": "github/Bonfanti88/MCMCI", "html_url": "https://rseng.github.io/software/repository/github/Bonfanti88/MCMCI", "api_url": "https://rseng.github.io/software/api/repos/github/Bonfanti88/MCMCI"}, {"uid": "github/huangnengCSU/compleasm", "html_url": "https://rseng.github.io/software/repository/github/huangnengCSU/compleasm", "api_url": "https://rseng.github.io/software/api/repos/github/huangnengCSU/compleasm"}, {"uid": "github/benjaminbolling/DynaGUI", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/DynaGUI", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/DynaGUI"}, {"uid": "github/benjaminbolling/RSW", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/RSW", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/RSW"}, {"uid": "github/mmp2/megaman", "html_url": "https://rseng.github.io/software/repository/github/mmp2/megaman", "api_url": "https://rseng.github.io/software/api/repos/github/mmp2/megaman"}, {"uid": "github/jmd-dk/concept", "html_url": "https://rseng.github.io/software/repository/github/jmd-dk/concept", "api_url": "https://rseng.github.io/software/api/repos/github/jmd-dk/concept"}, {"uid": "github/EpistasisLab/tpot", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/tpot", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/tpot"}, {"uid": "github/EpistasisLab/regens", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/regens", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/regens"}, {"uid": "github/PrincetonUniversity/athena", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/athena", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/athena"}, {"uid": "github/PrincetonUniversity/Athena-Cversion", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/Athena-Cversion", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/Athena-Cversion"}, {"uid": "github/PrincetonUniversity/FastTemplatePeriodogram", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/FastTemplatePeriodogram"}, {"uid": "github/shirtsgroup/physical_validation", "html_url": "https://rseng.github.io/software/repository/github/shirtsgroup/physical_validation", "api_url": "https://rseng.github.io/software/api/repos/github/shirtsgroup/physical_validation"}, {"uid": "github/jeschaef/Graph4Med", "html_url": "https://rseng.github.io/software/repository/github/jeschaef/Graph4Med", "api_url": "https://rseng.github.io/software/api/repos/github/jeschaef/Graph4Med"}, {"uid": "github/pinellolab/CRISPRitz", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPRitz", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPRitz"}, {"uid": "github/pinellolab/CRISPResso2", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPResso2", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPResso2"}, {"uid": "github/pinellolab/STREAM", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/STREAM", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/STREAM"}, {"uid": "github/heatherprince/cosmoped", "html_url": "https://rseng.github.io/software/repository/github/heatherprince/cosmoped", "api_url": "https://rseng.github.io/software/api/repos/github/heatherprince/cosmoped"}, {"uid": "github/robashaw/libecpint", "html_url": "https://rseng.github.io/software/repository/github/robashaw/libecpint", "api_url": "https://rseng.github.io/software/api/repos/github/robashaw/libecpint"}, {"uid": "github/mildpiggy/DEP2", "html_url": "https://rseng.github.io/software/repository/github/mildpiggy/DEP2", "api_url": "https://rseng.github.io/software/api/repos/github/mildpiggy/DEP2"}, {"uid": "github/gagneurlab/drop", "html_url": "https://rseng.github.io/software/repository/github/gagneurlab/drop", "api_url": "https://rseng.github.io/software/api/repos/github/gagneurlab/drop"}, {"uid": "github/nbarbey/TomograPy", "html_url": "https://rseng.github.io/software/repository/github/nbarbey/TomograPy", "api_url": "https://rseng.github.io/software/api/repos/github/nbarbey/TomograPy"}, {"uid": "github/ahudde/greeks", "html_url": "https://rseng.github.io/software/repository/github/ahudde/greeks", "api_url": "https://rseng.github.io/software/api/repos/github/ahudde/greeks"}, {"uid": "github/tzhu-bio/UMI-ATAC-seq", "html_url": "https://rseng.github.io/software/repository/github/tzhu-bio/UMI-ATAC-seq", "api_url": "https://rseng.github.io/software/api/repos/github/tzhu-bio/UMI-ATAC-seq"}, {"uid": "github/babinyurii/recan", "html_url": "https://rseng.github.io/software/repository/github/babinyurii/recan", "api_url": "https://rseng.github.io/software/api/repos/github/babinyurii/recan"}, {"uid": "github/ArkajyotiSaha/RandomForestsGLS", "html_url": "https://rseng.github.io/software/repository/github/ArkajyotiSaha/RandomForestsGLS", "api_url": "https://rseng.github.io/software/api/repos/github/ArkajyotiSaha/RandomForestsGLS"}, {"uid": "github/CATG-Github/panscan", "html_url": "https://rseng.github.io/software/repository/github/CATG-Github/panscan", "api_url": "https://rseng.github.io/software/api/repos/github/CATG-Github/panscan"}, {"uid": "github/Ayuei/DeBEIR", "html_url": "https://rseng.github.io/software/repository/github/Ayuei/DeBEIR", "api_url": "https://rseng.github.io/software/api/repos/github/Ayuei/DeBEIR"}, {"uid": "github/bccp/nbodykit", "html_url": "https://rseng.github.io/software/repository/github/bccp/nbodykit", "api_url": "https://rseng.github.io/software/api/repos/github/bccp/nbodykit"}, {"uid": "github/nwchemgit/nwchem", "html_url": "https://rseng.github.io/software/repository/github/nwchemgit/nwchem", "api_url": "https://rseng.github.io/software/api/repos/github/nwchemgit/nwchem"}, {"uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "html_url": "https://rseng.github.io/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "api_url": "https://rseng.github.io/software/api/repos/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-"}, {"uid": "github/brinckmann/montepython_public", "html_url": "https://rseng.github.io/software/repository/github/brinckmann/montepython_public", "api_url": "https://rseng.github.io/software/api/repos/github/brinckmann/montepython_public"}, {"uid": "github/CliMA/CalibrateEmulateSample.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/CalibrateEmulateSample.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/CalibrateEmulateSample.jl"}, {"uid": "github/CliMA/EnsembleKalmanProcesses.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/EnsembleKalmanProcesses.jl"}, {"uid": "github/mazzalab/pyntacle", "html_url": "https://rseng.github.io/software/repository/github/mazzalab/pyntacle", "api_url": "https://rseng.github.io/software/api/repos/github/mazzalab/pyntacle"}, {"uid": "github/MarioRomeroC/Mixclask", "html_url": "https://rseng.github.io/software/repository/github/MarioRomeroC/Mixclask", "api_url": "https://rseng.github.io/software/api/repos/github/MarioRomeroC/Mixclask"}, {"uid": "github/ExObsSim/ExoRad2-public", "html_url": "https://rseng.github.io/software/repository/github/ExObsSim/ExoRad2-public", "api_url": "https://rseng.github.io/software/api/repos/github/ExObsSim/ExoRad2-public"}, {"uid": "github/SzokeMark-Andor/AstroDataProcessing", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/AstroDataProcessing", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/AstroDataProcessing"}, {"uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy"}, {"uid": "github/ProjectPyRhO/PyRhO", "html_url": "https://rseng.github.io/software/repository/github/ProjectPyRhO/PyRhO", "api_url": "https://rseng.github.io/software/api/repos/github/ProjectPyRhO/PyRhO"}, {"uid": "github/yangyongsan-bio/GREAP", "html_url": "https://rseng.github.io/software/repository/github/yangyongsan-bio/GREAP", "api_url": "https://rseng.github.io/software/api/repos/github/yangyongsan-bio/GREAP"}, {"uid": "github/agreenbaum/gsgs", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/gsgs", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/gsgs"}, {"uid": "github/agreenbaum/ImPlaneIA", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/ImPlaneIA", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/ImPlaneIA"}, {"uid": "github/nnssa/gallumi_public", "html_url": "https://rseng.github.io/software/repository/github/nnssa/gallumi_public", "api_url": "https://rseng.github.io/software/api/repos/github/nnssa/gallumi_public"}, {"uid": "github/dirac-institute/asterogap", "html_url": "https://rseng.github.io/software/repository/github/dirac-institute/asterogap", "api_url": "https://rseng.github.io/software/api/repos/github/dirac-institute/asterogap"}, {"uid": "github/elsner/arkcos", "html_url": "https://rseng.github.io/software/repository/github/elsner/arkcos", "api_url": "https://rseng.github.io/software/api/repos/github/elsner/arkcos"}, {"uid": "github/SPARC-X/SPARC-X-API", "html_url": "https://rseng.github.io/software/repository/github/SPARC-X/SPARC-X-API", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-X/SPARC-X-API"}, {"uid": "github/coolneighbors/unwise-verse", "html_url": "https://rseng.github.io/software/repository/github/coolneighbors/unwise-verse", "api_url": "https://rseng.github.io/software/api/repos/github/coolneighbors/unwise-verse"}, {"uid": "github/ajeldorado/falco-python", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-python", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-python"}, {"uid": "github/ajeldorado/falco-matlab", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-matlab"}, {"uid": "github/Qiskit/rustworkx", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/rustworkx", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/rustworkx"}, {"uid": "github/Qiskit/qiskit-experiments", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/qiskit-experiments", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/qiskit-experiments"}, {"uid": "github/deepskies/DeepBench", "html_url": "https://rseng.github.io/software/repository/github/deepskies/DeepBench", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/DeepBench"}, {"uid": "github/deepskies/deeplenstronomy", "html_url": "https://rseng.github.io/software/repository/github/deepskies/deeplenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/deeplenstronomy"}, {"uid": "github/fbreitwieser/krakenuniq", "html_url": "https://rseng.github.io/software/repository/github/fbreitwieser/krakenuniq", "api_url": "https://rseng.github.io/software/api/repos/github/fbreitwieser/krakenuniq"}, {"uid": "github/lab-medvedeva/GADES-main", "html_url": "https://rseng.github.io/software/repository/github/lab-medvedeva/GADES-main", "api_url": "https://rseng.github.io/software/api/repos/github/lab-medvedeva/GADES-main"}, {"uid": "github/HorvathLab/ReQTL", "html_url": "https://rseng.github.io/software/repository/github/HorvathLab/ReQTL", "api_url": "https://rseng.github.io/software/api/repos/github/HorvathLab/ReQTL"}, {"uid": "github/pirovc/ganon_benchmark", "html_url": "https://rseng.github.io/software/repository/github/pirovc/ganon_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/pirovc/ganon_benchmark"}, {"uid": "github/ChrisBeaumont/brut", "html_url": "https://rseng.github.io/software/repository/github/ChrisBeaumont/brut", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBeaumont/brut"}, {"uid": "github/potree/PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/potree/PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/potree/PotreeConverter"}, {"uid": "github/seahorce-scidac/REMORA", "html_url": "https://rseng.github.io/software/repository/github/seahorce-scidac/REMORA", "api_url": "https://rseng.github.io/software/api/repos/github/seahorce-scidac/REMORA"}, {"uid": "github/florpi/sunbird", "html_url": "https://rseng.github.io/software/repository/github/florpi/sunbird", "api_url": "https://rseng.github.io/software/api/repos/github/florpi/sunbird"}, {"uid": "github/theislab/scCODA", "html_url": "https://rseng.github.io/software/repository/github/theislab/scCODA", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scCODA"}, {"uid": "github/theislab/scanpy", "html_url": "https://rseng.github.io/software/repository/github/theislab/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scanpy"}, {"uid": "github/theislab/scvelo", "html_url": "https://rseng.github.io/software/repository/github/theislab/scvelo", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scvelo"}, {"uid": "github/theislab/cellrank", "html_url": "https://rseng.github.io/software/repository/github/theislab/cellrank", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/cellrank"}, {"uid": "github/theislab/anndata", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata"}, {"uid": "github/theislab/anndata2ri", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata2ri", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata2ri"}, {"uid": "github/Ecos-platform/ecos", "html_url": "https://rseng.github.io/software/repository/github/Ecos-platform/ecos", "api_url": "https://rseng.github.io/software/api/repos/github/Ecos-platform/ecos"}, {"uid": "github/dealii/dealii", "html_url": "https://rseng.github.io/software/repository/github/dealii/dealii", "api_url": "https://rseng.github.io/software/api/repos/github/dealii/dealii"}, {"uid": "github/harvard-nrg/scanbuddy", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/scanbuddy", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/scanbuddy"}, {"uid": "github/harvard-nrg/dwiqc", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/dwiqc", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/dwiqc"}, {"uid": "github/guaix-ucm/megaradrp", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/megaradrp", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/megaradrp"}, {"uid": "github/guaix-ucm/numina", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/numina", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/numina"}, {"uid": "github/Stat-Cook/deident", "html_url": "https://rseng.github.io/software/repository/github/Stat-Cook/deident", "api_url": "https://rseng.github.io/software/api/repos/github/Stat-Cook/deident"}, {"uid": "github/SALT-NIRWALS/nirwals", "html_url": "https://rseng.github.io/software/repository/github/SALT-NIRWALS/nirwals", "api_url": "https://rseng.github.io/software/api/repos/github/SALT-NIRWALS/nirwals"}, {"uid": "github/EoRImaging/FHD", "html_url": "https://rseng.github.io/software/repository/github/EoRImaging/FHD", "api_url": "https://rseng.github.io/software/api/repos/github/EoRImaging/FHD"}, {"uid": "github/BioComputingUP/ring-pymol", "html_url": "https://rseng.github.io/software/repository/github/BioComputingUP/ring-pymol", "api_url": "https://rseng.github.io/software/api/repos/github/BioComputingUP/ring-pymol"}, {"uid": "github/uwsbel/low-fidelity-dynamic-models", "html_url": "https://rseng.github.io/software/repository/github/uwsbel/low-fidelity-dynamic-models", "api_url": "https://rseng.github.io/software/api/repos/github/uwsbel/low-fidelity-dynamic-models"}, {"uid": "github/DeepMIALab/UC-NfNet", "html_url": "https://rseng.github.io/software/repository/github/DeepMIALab/UC-NfNet", "api_url": "https://rseng.github.io/software/api/repos/github/DeepMIALab/UC-NfNet"}, {"uid": "github/GilbertLabUCSF/CanDI", "html_url": "https://rseng.github.io/software/repository/github/GilbertLabUCSF/CanDI", "api_url": "https://rseng.github.io/software/api/repos/github/GilbertLabUCSF/CanDI"}, {"uid": "github/kboone/parsnip", "html_url": "https://rseng.github.io/software/repository/github/kboone/parsnip", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/parsnip"}, {"uid": "github/kboone/avocado", "html_url": "https://rseng.github.io/software/repository/github/kboone/avocado", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/avocado"}, {"uid": "github/nlesc-dirac/sagecal", "html_url": "https://rseng.github.io/software/repository/github/nlesc-dirac/sagecal", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-dirac/sagecal"}, {"uid": "github/felixchenier/kineticstoolkit", "html_url": "https://rseng.github.io/software/repository/github/felixchenier/kineticstoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/felixchenier/kineticstoolkit"}, {"uid": "github/dzesmin/TEA", "html_url": "https://rseng.github.io/software/repository/github/dzesmin/TEA", "api_url": "https://rseng.github.io/software/api/repos/github/dzesmin/TEA"}, {"uid": "github/pwry/lextes", "html_url": "https://rseng.github.io/software/repository/github/pwry/lextes", "api_url": "https://rseng.github.io/software/api/repos/github/pwry/lextes"}, {"uid": "github/czbiohub-sf/Rapid-QC-MS", "html_url": "https://rseng.github.io/software/repository/github/czbiohub-sf/Rapid-QC-MS", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub-sf/Rapid-QC-MS"}, {"uid": "github/sonny-harman/snowball", "html_url": "https://rseng.github.io/software/repository/github/sonny-harman/snowball", "api_url": "https://rseng.github.io/software/api/repos/github/sonny-harman/snowball"}, {"uid": "github/bcjaeger/aorsf", "html_url": "https://rseng.github.io/software/repository/github/bcjaeger/aorsf", "api_url": "https://rseng.github.io/software/api/repos/github/bcjaeger/aorsf"}, {"uid": "gitlab/gims-developers/gims", "html_url": "https://rseng.github.io/software/repository/gitlab/gims-developers/gims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gims-developers/gims"}, {"uid": "gitlab/vibes-developers/vibes", "html_url": "https://rseng.github.io/software/repository/gitlab/vibes-developers/vibes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vibes-developers/vibes"}, {"uid": "gitlab/jerrytheo16/exoplanet", "html_url": "https://rseng.github.io/software/repository/gitlab/jerrytheo16/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jerrytheo16/exoplanet"}, {"uid": "gitlab/programgreg/tagginglatencyestimator", "html_url": "https://rseng.github.io/software/repository/gitlab/programgreg/tagginglatencyestimator", "api_url": "https://rseng.github.io/software/api/repos/gitlab/programgreg/tagginglatencyestimator"}, {"uid": "gitlab/fduchate/predihood", "html_url": "https://rseng.github.io/software/repository/gitlab/fduchate/predihood", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fduchate/predihood"}, {"uid": "gitlab/pyFBS/pyFBS", "html_url": "https://rseng.github.io/software/repository/gitlab/pyFBS/pyFBS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pyFBS/pyFBS"}, {"uid": "gitlab/polmag/PORTA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/PORTA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/PORTA"}, {"uid": "gitlab/polmag/P-CORONA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/P-CORONA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/P-CORONA"}, {"uid": "gitlab/treangenlab/emu", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/emu"}, {"uid": "gitlab/treangenlab/vulcan", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/vulcan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/vulcan"}, {"uid": "gitlab/groimp-plugins/Pointcloud", "html_url": "https://rseng.github.io/software/repository/gitlab/groimp-plugins/Pointcloud", "api_url": "https://rseng.github.io/software/api/repos/gitlab/groimp-plugins/Pointcloud"}, {"uid": "gitlab/andrea-tango/ficos", "html_url": "https://rseng.github.io/software/repository/gitlab/andrea-tango/ficos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andrea-tango/ficos"}, {"uid": "gitlab/german.tischler/libmaus2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/libmaus2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/libmaus2"}, {"uid": "gitlab/german.tischler/biobambam2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/biobambam2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/biobambam2"}, {"uid": "gitlab/remram44/taguette", "html_url": "https://rseng.github.io/software/repository/gitlab/remram44/taguette", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remram44/taguette"}, {"uid": "gitlab/moerman1/fhi-cc4s", "html_url": "https://rseng.github.io/software/repository/gitlab/moerman1/fhi-cc4s", "api_url": "https://rseng.github.io/software/api/repos/gitlab/moerman1/fhi-cc4s"}, {"uid": "gitlab/loic.cg.rossi/pymiedap", "html_url": "https://rseng.github.io/software/repository/gitlab/loic.cg.rossi/pymiedap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/loic.cg.rossi/pymiedap"}, {"uid": "gitlab/Molcas/OpenMolcas", "html_url": "https://rseng.github.io/software/repository/gitlab/Molcas/OpenMolcas", "api_url": "https://rseng.github.io/software/api/repos/gitlab/Molcas/OpenMolcas"}, {"uid": "gitlab/rki_bioinformatics/IDeFIX", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/IDeFIX", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/IDeFIX"}, {"uid": "gitlab/rki_bioinformatics/HiLive2", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/HiLive2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/HiLive2"}, {"uid": "gitlab/rki_bioinformatics/purple", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/purple", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/purple"}, {"uid": "gitlab/mauricemolli/petitRADTRANS", "html_url": "https://rseng.github.io/software/repository/gitlab/mauricemolli/petitRADTRANS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mauricemolli/petitRADTRANS"}, {"uid": "gitlab/clairedavies/sedbys", "html_url": "https://rseng.github.io/software/repository/gitlab/clairedavies/sedbys", "api_url": "https://rseng.github.io/software/api/repos/gitlab/clairedavies/sedbys"}, {"uid": "gitlab/cosapp/cosapp", "html_url": "https://rseng.github.io/software/repository/gitlab/cosapp/cosapp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosapp/cosapp"}, {"uid": "gitlab/pipe3d/pyPipe3D", "html_url": "https://rseng.github.io/software/repository/gitlab/pipe3d/pyPipe3D", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pipe3d/pyPipe3D"}, {"uid": "gitlab/vincent-sater/umigen", "html_url": "https://rseng.github.io/software/repository/gitlab/vincent-sater/umigen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vincent-sater/umigen"}, {"uid": "gitlab/petsc/petsc", "html_url": "https://rseng.github.io/software/repository/gitlab/petsc/petsc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/petsc/petsc"}, {"uid": "gitlab/pythia-uq/pythia", "html_url": "https://rseng.github.io/software/repository/gitlab/pythia-uq/pythia", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pythia-uq/pythia"}, {"uid": "gitlab/davidwoodburn/r3f", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/r3f", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/r3f"}, {"uid": "gitlab/davidwoodburn/itrm", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/itrm", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/itrm"}, {"uid": "gitlab/gpagano/lensinggw", "html_url": "https://rseng.github.io/software/repository/gitlab/gpagano/lensinggw", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gpagano/lensinggw"}, {"uid": "gitlab/bu_cnio/vulcanspot", "html_url": "https://rseng.github.io/software/repository/gitlab/bu_cnio/vulcanspot", "api_url": "https://rseng.github.io/software/api/repos/gitlab/bu_cnio/vulcanspot"}, {"uid": "gitlab/ztzou/phydl", "html_url": "https://rseng.github.io/software/repository/gitlab/ztzou/phydl", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ztzou/phydl"}, {"uid": "gitlab/joseaher/astroplotlib", "html_url": "https://rseng.github.io/software/repository/gitlab/joseaher/astroplotlib", "api_url": "https://rseng.github.io/software/api/repos/gitlab/joseaher/astroplotlib"}, {"uid": "gitlab/uit-sfb/metapipe", "html_url": "https://rseng.github.io/software/repository/gitlab/uit-sfb/metapipe", "api_url": "https://rseng.github.io/software/api/repos/gitlab/uit-sfb/metapipe"}, {"uid": "gitlab/chrjan/seq-seq-pan", "html_url": "https://rseng.github.io/software/repository/gitlab/chrjan/seq-seq-pan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chrjan/seq-seq-pan"}, {"uid": "gitlab/qc-devs/aqcnes", "html_url": "https://rseng.github.io/software/repository/gitlab/qc-devs/aqcnes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/qc-devs/aqcnes"}, {"uid": "gitlab/random-quintessence/random-quintessence", "html_url": "https://rseng.github.io/software/repository/gitlab/random-quintessence/random-quintessence", "api_url": "https://rseng.github.io/software/api/repos/gitlab/random-quintessence/random-quintessence"}, {"uid": "gitlab/chaver/choco-mining", "html_url": "https://rseng.github.io/software/repository/gitlab/chaver/choco-mining", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chaver/choco-mining"}, {"uid": "gitlab/cirad-apps/phylostems", "html_url": "https://rseng.github.io/software/repository/gitlab/cirad-apps/phylostems", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cirad-apps/phylostems"}, {"uid": "gitlab/cmbm-ethz/miop", "html_url": "https://rseng.github.io/software/repository/gitlab/cmbm-ethz/miop", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cmbm-ethz/miop"}, {"uid": "gitlab/djsmithbham/cnearest", "html_url": "https://rseng.github.io/software/repository/gitlab/djsmithbham/cnearest", "api_url": "https://rseng.github.io/software/api/repos/gitlab/djsmithbham/cnearest"}, {"uid": "gitlab/mule-tools/package-x", "html_url": "https://rseng.github.io/software/repository/gitlab/mule-tools/package-x", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mule-tools/package-x"}, {"uid": "gitlab/chjordan/sslf", "html_url": "https://rseng.github.io/software/repository/gitlab/chjordan/sslf", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chjordan/sslf"}, {"uid": "gitlab/pvst/asi", "html_url": "https://rseng.github.io/software/repository/gitlab/pvst/asi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pvst/asi"}, {"uid": "gitlab/octopus-code/octopus", "html_url": "https://rseng.github.io/software/repository/gitlab/octopus-code/octopus", "api_url": "https://rseng.github.io/software/api/repos/gitlab/octopus-code/octopus"}, {"uid": "gitlab/rahmannlab/episegmix", "html_url": "https://rseng.github.io/software/repository/gitlab/rahmannlab/episegmix", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rahmannlab/episegmix"}, {"uid": "gitlab/elsi_project/elsi_interface", "html_url": "https://rseng.github.io/software/repository/gitlab/elsi_project/elsi_interface", "api_url": "https://rseng.github.io/software/api/repos/gitlab/elsi_project/elsi_interface"}, {"uid": "gitlab/magnumpi/magnumpi", "html_url": "https://rseng.github.io/software/repository/gitlab/magnumpi/magnumpi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/magnumpi/magnumpi"}, {"uid": "gitlab/ezlab/busco", "html_url": "https://rseng.github.io/software/repository/gitlab/ezlab/busco", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ezlab/busco"}, {"uid": "gitlab/robizzard/libcdict", "html_url": "https://rseng.github.io/software/repository/gitlab/robizzard/libcdict", "api_url": "https://rseng.github.io/software/api/repos/gitlab/robizzard/libcdict"}, {"uid": "gitlab/micromorph/ratel", "html_url": "https://rseng.github.io/software/repository/gitlab/micromorph/ratel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/micromorph/ratel"}, {"uid": "gitlab/burstcube/mhealpy", "html_url": "https://rseng.github.io/software/repository/gitlab/burstcube/mhealpy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/burstcube/mhealpy"}, {"uid": "gitlab/EliseLei/easychem", "html_url": "https://rseng.github.io/software/repository/gitlab/EliseLei/easychem", "api_url": "https://rseng.github.io/software/api/repos/gitlab/EliseLei/easychem"}, {"uid": "gitlab/remikz/nccmp", "html_url": "https://rseng.github.io/software/repository/gitlab/remikz/nccmp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remikz/nccmp"}, {"uid": "gitlab/gmamon/MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/gitlab/gmamon/MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gmamon/MAMPOSSt"}, {"uid": "gitlab/multigris/mgris", "html_url": "https://rseng.github.io/software/repository/gitlab/multigris/mgris", "api_url": "https://rseng.github.io/software/api/repos/gitlab/multigris/mgris"}, {"uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", "html_url": "https://rseng.github.io/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", "api_url": "https://rseng.github.io/software/api/repos/gitlab/morikawa-lab-osakau/vibir-parallel-compute"}, {"uid": "gitlab/davidtourigny/dynamic-fba", "html_url": "https://rseng.github.io/software/repository/gitlab/davidtourigny/dynamic-fba", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidtourigny/dynamic-fba"}, {"uid": "gitlab/jtagusari/hrisk-noisemodelling", "html_url": "https://rseng.github.io/software/repository/gitlab/jtagusari/hrisk-noisemodelling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jtagusari/hrisk-noisemodelling"}, {"uid": "gitlab/emd-dev/emd", "html_url": "https://rseng.github.io/software/repository/gitlab/emd-dev/emd", "api_url": "https://rseng.github.io/software/api/repos/gitlab/emd-dev/emd"}, {"uid": "gitlab/thartwig/asloth", "html_url": "https://rseng.github.io/software/repository/gitlab/thartwig/asloth", "api_url": "https://rseng.github.io/software/api/repos/gitlab/thartwig/asloth"}, {"uid": "gitlab/cosmology-ethz/ufig", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmology-ethz/ufig", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmology-ethz/ufig"}, {"uid": "gitlab/AstroVian/bmarxiv", "html_url": "https://rseng.github.io/software/repository/gitlab/AstroVian/bmarxiv", "api_url": "https://rseng.github.io/software/api/repos/gitlab/AstroVian/bmarxiv"}, {"uid": "gitlab/ENKI-portal/ThermoEngine", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoEngine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoEngine"}, {"uid": "gitlab/ENKI-portal/ThermoCodegen", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoCodegen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoCodegen"}, {"uid": "gitlab/ENKI-portal/vaporock", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/vaporock", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/vaporock"}, {"uid": "gitlab/binary_c/binary_c-python", "html_url": "https://rseng.github.io/software/repository/gitlab/binary_c/binary_c-python", "api_url": "https://rseng.github.io/software/api/repos/gitlab/binary_c/binary_c-python"}, {"uid": "gitlab/LouisLab/PiVR", "html_url": "https://rseng.github.io/software/repository/gitlab/LouisLab/PiVR", "api_url": "https://rseng.github.io/software/api/repos/gitlab/LouisLab/PiVR"}, {"uid": "gitlab/ProjectRHEA/flowsolverrhea", "html_url": "https://rseng.github.io/software/repository/gitlab/ProjectRHEA/flowsolverrhea", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ProjectRHEA/flowsolverrhea"}, {"uid": "gitlab/metafundev/metafun", "html_url": "https://rseng.github.io/software/repository/gitlab/metafundev/metafun", "api_url": "https://rseng.github.io/software/api/repos/gitlab/metafundev/metafun"}, {"uid": "gitlab/sevecekp/sph", "html_url": "https://rseng.github.io/software/repository/gitlab/sevecekp/sph", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sevecekp/sph"}, {"uid": "gitlab/sissopp_developers/sissopp", "html_url": "https://rseng.github.io/software/repository/gitlab/sissopp_developers/sissopp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sissopp_developers/sissopp"}, {"uid": "gitlab/imoralc/malu-ifs-visualization-tool", "html_url": "https://rseng.github.io/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", "api_url": "https://rseng.github.io/software/api/repos/gitlab/imoralc/malu-ifs-visualization-tool"}, {"uid": "gitlab/David_Haegele/line_racer", "html_url": "https://rseng.github.io/software/repository/gitlab/David_Haegele/line_racer", "api_url": "https://rseng.github.io/software/api/repos/gitlab/David_Haegele/line_racer"}, {"uid": "gitlab/dsbowen/conditional-inference", "html_url": "https://rseng.github.io/software/repository/gitlab/dsbowen/conditional-inference", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dsbowen/conditional-inference"}, {"uid": "gitlab/mainlabwsu/bims", "html_url": "https://rseng.github.io/software/repository/gitlab/mainlabwsu/bims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mainlabwsu/bims"}, {"uid": "gitlab/open-darts/open-darts", "html_url": "https://rseng.github.io/software/repository/gitlab/open-darts/open-darts", "api_url": "https://rseng.github.io/software/api/repos/gitlab/open-darts/open-darts"}, {"uid": "gitlab/dalton/dalton", "html_url": "https://rseng.github.io/software/repository/gitlab/dalton/dalton", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dalton/dalton"}, {"uid": "gitlab/eleonoraalei/exo-mercat-gui", "html_url": "https://rseng.github.io/software/repository/gitlab/eleonoraalei/exo-mercat-gui", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eleonoraalei/exo-mercat-gui"}, {"uid": "gitlab/jason-rumengan/pyarma", "html_url": "https://rseng.github.io/software/repository/gitlab/jason-rumengan/pyarma", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jason-rumengan/pyarma"}, {"uid": "gitlab/ampere2/metalwalls", "html_url": "https://rseng.github.io/software/repository/gitlab/ampere2/metalwalls", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ampere2/metalwalls"}, {"uid": "gitlab/eduardo-vitral/balrogo", "html_url": "https://rseng.github.io/software/repository/gitlab/eduardo-vitral/balrogo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eduardo-vitral/balrogo"}, {"uid": "gitlab/dglaeser/fieldcompare", "html_url": "https://rseng.github.io/software/repository/gitlab/dglaeser/fieldcompare", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dglaeser/fieldcompare"}, {"uid": "gitlab/sigcorr/sigcorr", "html_url": "https://rseng.github.io/software/repository/gitlab/sigcorr/sigcorr", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sigcorr/sigcorr"}, {"uid": "gitlab/leelamichaels/Omega", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Omega", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Omega"}, {"uid": "gitlab/leelamichaels/Infinity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Infinity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Infinity"}, {"uid": "gitlab/leelamichaels/Elysium", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Elysium", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Elysium"}, {"uid": "gitlab/leelamichaels/Burning_Arrow", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Burning_Arrow", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Burning_Arrow"}, {"uid": "gitlab/leelamichaels/Tranquillity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Tranquillity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Tranquillity"}, {"uid": "gitlab/vda-lab/snowflake", "html_url": "https://rseng.github.io/software/repository/gitlab/vda-lab/snowflake", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vda-lab/snowflake"}, {"uid": "gitlab/RKIBioinformaticsPipelines/QCumber", "html_url": "https://rseng.github.io/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", "api_url": "https://rseng.github.io/software/api/repos/gitlab/RKIBioinformaticsPipelines/QCumber"}, {"uid": "gitlab/astrogal/slideParam", "html_url": "https://rseng.github.io/software/repository/gitlab/astrogal/slideParam", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astrogal/slideParam"}, {"uid": "gitlab/astron-idg/idg", "html_url": "https://rseng.github.io/software/repository/gitlab/astron-idg/idg", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astron-idg/idg"}, {"uid": "gitlab/picos-api/picos", "html_url": "https://rseng.github.io/software/repository/gitlab/picos-api/picos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/picos-api/picos"}, {"uid": "gitlab/aroffringa/aoflagger", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/aoflagger", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/aoflagger"}, {"uid": "gitlab/aroffringa/wsclean", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/wsclean", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/wsclean"}, {"uid": "gitlab/cracklet/cracklet", "html_url": "https://rseng.github.io/software/repository/gitlab/cracklet/cracklet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cracklet/cracklet"}, {"uid": "gitlab/JuditGG/trumpetplots", "html_url": "https://rseng.github.io/software/repository/gitlab/JuditGG/trumpetplots", "api_url": "https://rseng.github.io/software/api/repos/gitlab/JuditGG/trumpetplots"}, {"uid": "gitlab/fibreglass/pivc", "html_url": "https://rseng.github.io/software/repository/gitlab/fibreglass/pivc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fibreglass/pivc"}, {"uid": "gitlab/permafrostnet/teaspoon", "html_url": "https://rseng.github.io/software/repository/gitlab/permafrostnet/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/gitlab/permafrostnet/teaspoon"}, {"uid": "gitlab/ags-data-format-wg/ags-python-library", "html_url": "https://rseng.github.io/software/repository/gitlab/ags-data-format-wg/ags-python-library", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ags-data-format-wg/ags-python-library"}, {"uid": "gitlab/paulklemm_PHD/proteinortho", "html_url": "https://rseng.github.io/software/repository/gitlab/paulklemm_PHD/proteinortho", "api_url": "https://rseng.github.io/software/api/repos/gitlab/paulklemm_PHD/proteinortho"}, {"uid": "gitlab/sybreton/apollinaire", "html_url": "https://rseng.github.io/software/repository/gitlab/sybreton/apollinaire", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sybreton/apollinaire"}, {"uid": "gitlab/souvlaki/thalassa", "html_url": "https://rseng.github.io/software/repository/gitlab/souvlaki/thalassa", "api_url": "https://rseng.github.io/software/api/repos/gitlab/souvlaki/thalassa"}, {"uid": "gitlab/mbiagetti/persistent_homology_lss", "html_url": "https://rseng.github.io/software/repository/gitlab/mbiagetti/persistent_homology_lss", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mbiagetti/persistent_homology_lss"}, {"uid": "gitlab/geekysquirrel/bigx", "html_url": "https://rseng.github.io/software/repository/gitlab/geekysquirrel/bigx", "api_url": "https://rseng.github.io/software/api/repos/gitlab/geekysquirrel/bigx"}, {"uid": "gitlab/mobse/source-code", "html_url": "https://rseng.github.io/software/repository/gitlab/mobse/source-code", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mobse/source-code"}, {"uid": "gitlab/wpettersson/kep_solver", "html_url": "https://rseng.github.io/software/repository/gitlab/wpettersson/kep_solver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/wpettersson/kep_solver"}, {"uid": "gitlab/mcfuman/SpectraPy", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfuman/SpectraPy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfuman/SpectraPy"}, {"uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", "html_url": "https://rseng.github.io/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", "api_url": "https://rseng.github.io/software/api/repos/gitlab/MartinBeseda/sa-oo-vqe-qiskit"}, {"uid": "gitlab/mcfrith/tantan", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/tantan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/tantan"}, {"uid": "gitlab/mcfrith/paraclu", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/paraclu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/paraclu"}, {"uid": "gitlab/mcfrith/last", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/last", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/last"}, {"uid": "gitlab/mcfrith/lamassemble", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/lamassemble", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/lamassemble"}, {"uid": "gitlab/jesseds/apav", "html_url": "https://rseng.github.io/software/repository/gitlab/jesseds/apav", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jesseds/apav"}, {"uid": "gitlab/BioimageInformaticsGroup/openphi", "html_url": "https://rseng.github.io/software/repository/gitlab/BioimageInformaticsGroup/openphi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/BioimageInformaticsGroup/openphi"}, {"uid": "gitlab/ComputationalScience/idinn", "html_url": "https://rseng.github.io/software/repository/gitlab/ComputationalScience/idinn", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ComputationalScience/idinn"}, {"uid": "gitlab/ChemBioHub/tpmap", "html_url": "https://rseng.github.io/software/repository/gitlab/ChemBioHub/tpmap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ChemBioHub/tpmap"}, {"uid": "gitlab/libreumg/dataquier", "html_url": "https://rseng.github.io/software/repository/gitlab/libreumg/dataquier", "api_url": "https://rseng.github.io/software/api/repos/gitlab/libreumg/dataquier"}, {"uid": "gitlab/aegge/comet-emu", "html_url": "https://rseng.github.io/software/repository/gitlab/aegge/comet-emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aegge/comet-emu"}, {"uid": "gitlab/andresruiz/Sparkling", "html_url": "https://rseng.github.io/software/repository/gitlab/andresruiz/Sparkling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andresruiz/Sparkling"}, {"uid": "gitlab/materials-modeling/calorine", "html_url": "https://rseng.github.io/software/repository/gitlab/materials-modeling/calorine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/materials-modeling/calorine"}, {"uid": "gitlab/andreas.andrusch/paipline", "html_url": "https://rseng.github.io/software/repository/gitlab/andreas.andrusch/paipline", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andreas.andrusch/paipline"}, {"uid": "gitlab/etienne.behar/menura", "html_url": "https://rseng.github.io/software/repository/gitlab/etienne.behar/menura", "api_url": "https://rseng.github.io/software/api/repos/gitlab/etienne.behar/menura"}, {"uid": "gitlab/InspectorCell/inspectorcell", "html_url": "https://rseng.github.io/software/repository/gitlab/InspectorCell/inspectorcell", "api_url": "https://rseng.github.io/software/api/repos/gitlab/InspectorCell/inspectorcell"}, {"uid": "gitlab/ostrokach/proteinsolver", "html_url": "https://rseng.github.io/software/repository/gitlab/ostrokach/proteinsolver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ostrokach/proteinsolver"}, {"uid": "gitlab/ffaucher/hawen", "html_url": "https://rseng.github.io/software/repository/gitlab/ffaucher/hawen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ffaucher/hawen"}, {"uid": "gitlab/casi-project/casi-2d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-2d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-2d"}, {"uid": "gitlab/casi-project/casi-3d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-3d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-3d"}, {"uid": "gitlab/medbio/disgenet2r", "html_url": "https://rseng.github.io/software/repository/gitlab/medbio/disgenet2r", "api_url": "https://rseng.github.io/software/api/repos/gitlab/medbio/disgenet2r"}, {"uid": "gitlab/project-dare/dare-platform", "html_url": "https://rseng.github.io/software/repository/gitlab/project-dare/dare-platform", "api_url": "https://rseng.github.io/software/api/repos/gitlab/project-dare/dare-platform"}, {"uid": "gitlab/cosmograil/starred", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/starred", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/starred"}, {"uid": "gitlab/cosmograil/PyCS3", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/PyCS3", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/PyCS3"}, {"uid": "gitlab/chiemotono/mdcontactcom", "html_url": "https://rseng.github.io/software/repository/gitlab/chiemotono/mdcontactcom", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chiemotono/mdcontactcom"}, {"uid": "gitlab/esa/pyxel", "html_url": "https://rseng.github.io/software/repository/gitlab/esa/pyxel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/esa/pyxel"}, {"uid": "gitlab/habermann_lab/phasik", "html_url": "https://rseng.github.io/software/repository/gitlab/habermann_lab/phasik", "api_url": "https://rseng.github.io/software/api/repos/gitlab/habermann_lab/phasik"}, {"uid": "gitlab/kmrajwade/iqrm_apollo", "html_url": "https://rseng.github.io/software/repository/gitlab/kmrajwade/iqrm_apollo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/kmrajwade/iqrm_apollo"}, {"uid": "gitlab/aceteam.kaist/ACE-Molecule", "html_url": "https://rseng.github.io/software/repository/gitlab/aceteam.kaist/ACE-Molecule", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aceteam.kaist/ACE-Molecule"}] diff --git a/docs/api/repos/parser/github/index.json b/docs/api/repos/parser/github/index.json index 15fda1e66..08734af8c 100644 --- a/docs/api/repos/parser/github/index.json +++ b/docs/api/repos/parser/github/index.json @@ -1 +1 @@ -[{"uid": "github/lsds/Neptune", "html_url": "https://rseng.github.io/software/repository/github/lsds/Neptune", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Neptune"}, {"uid": "github/lsds/Saber", "html_url": "https://rseng.github.io/software/repository/github/lsds/Saber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Saber"}, {"uid": "github/lsds/KungFu", "html_url": "https://rseng.github.io/software/repository/github/lsds/KungFu", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/KungFu"}, {"uid": "github/lsds/sgx-lkl", "html_url": "https://rseng.github.io/software/repository/github/lsds/sgx-lkl", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/sgx-lkl"}, {"uid": "github/lsds/LightSaber", "html_url": "https://rseng.github.io/software/repository/github/lsds/LightSaber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/LightSaber"}, {"uid": "github/lsds/TaLoS", "html_url": "https://rseng.github.io/software/repository/github/lsds/TaLoS", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/TaLoS"}, {"uid": "github/lsds/Crossbow", "html_url": "https://rseng.github.io/software/repository/github/lsds/Crossbow", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Crossbow"}, {"uid": "github/lsds/SEEP", "html_url": "https://rseng.github.io/software/repository/github/lsds/SEEP", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/SEEP"}, {"uid": "github/lsds/faasm", "html_url": "https://rseng.github.io/software/repository/github/lsds/faasm", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/faasm"}, {"uid": "github/lsds/Teechain", "html_url": "https://rseng.github.io/software/repository/github/lsds/Teechain", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Teechain"}, {"uid": "github/jcombs1/blasr", "html_url": "https://rseng.github.io/software/repository/github/jcombs1/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/jcombs1/blasr"}, {"uid": "github/gheald/rmclean", "html_url": "https://rseng.github.io/software/repository/github/gheald/rmclean", "api_url": "https://rseng.github.io/software/api/repos/github/gheald/rmclean"}, {"uid": "github/cov-ert/gofasta", "html_url": "https://rseng.github.io/software/repository/github/cov-ert/gofasta", "api_url": "https://rseng.github.io/software/api/repos/github/cov-ert/gofasta"}, {"uid": "github/V-Bernal/GeneNetTools", "html_url": "https://rseng.github.io/software/repository/github/V-Bernal/GeneNetTools", "api_url": "https://rseng.github.io/software/api/repos/github/V-Bernal/GeneNetTools"}, {"uid": "github/tanhevg/GpABC.jl", "html_url": "https://rseng.github.io/software/repository/github/tanhevg/GpABC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tanhevg/GpABC.jl"}, {"uid": "github/ugovaretto/molekel", "html_url": "https://rseng.github.io/software/repository/github/ugovaretto/molekel", "api_url": "https://rseng.github.io/software/api/repos/github/ugovaretto/molekel"}, {"uid": "github/blackjax-devs/blackjax", "html_url": "https://rseng.github.io/software/repository/github/blackjax-devs/blackjax", "api_url": "https://rseng.github.io/software/api/repos/github/blackjax-devs/blackjax"}, {"uid": "github/gavinsimpson/gratia", "html_url": "https://rseng.github.io/software/repository/github/gavinsimpson/gratia", "api_url": "https://rseng.github.io/software/api/repos/github/gavinsimpson/gratia"}, {"uid": "github/arkavo/CUDA-METRO", "html_url": "https://rseng.github.io/software/repository/github/arkavo/CUDA-METRO", "api_url": "https://rseng.github.io/software/api/repos/github/arkavo/CUDA-METRO"}, {"uid": "github/radifar/PyPLIF-HIPPOS", "html_url": "https://rseng.github.io/software/repository/github/radifar/PyPLIF-HIPPOS", "api_url": "https://rseng.github.io/software/api/repos/github/radifar/PyPLIF-HIPPOS"}, {"uid": "github/spexod/iSLAT", "html_url": "https://rseng.github.io/software/repository/github/spexod/iSLAT", "api_url": "https://rseng.github.io/software/api/repos/github/spexod/iSLAT"}, {"uid": "github/lkmklsmn/DrivAER", "html_url": "https://rseng.github.io/software/repository/github/lkmklsmn/DrivAER", "api_url": "https://rseng.github.io/software/api/repos/github/lkmklsmn/DrivAER"}, {"uid": "github/uab-cgds-worthey/quac", "html_url": "https://rseng.github.io/software/repository/github/uab-cgds-worthey/quac", "api_url": "https://rseng.github.io/software/api/repos/github/uab-cgds-worthey/quac"}, {"uid": "github/FireflySpectra/firefly_release", "html_url": "https://rseng.github.io/software/repository/github/FireflySpectra/firefly_release", "api_url": "https://rseng.github.io/software/api/repos/github/FireflySpectra/firefly_release"}, {"uid": "github/GooglingTheCancerGenome/sv-channels", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-channels", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-channels"}, {"uid": "github/GooglingTheCancerGenome/sv-callers", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-callers", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-callers"}, {"uid": "github/GooglingTheCancerGenome/sv-gen", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-gen", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-gen"}, {"uid": "github/rroyaute/h2_breeders_equation", "html_url": "https://rseng.github.io/software/repository/github/rroyaute/h2_breeders_equation", "api_url": "https://rseng.github.io/software/api/repos/github/rroyaute/h2_breeders_equation"}, {"uid": "github/BD2KGenomics/toil", "html_url": "https://rseng.github.io/software/repository/github/BD2KGenomics/toil", "api_url": "https://rseng.github.io/software/api/repos/github/BD2KGenomics/toil"}, {"uid": "github/BMCV/giatools", "html_url": "https://rseng.github.io/software/repository/github/BMCV/giatools", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/giatools"}, {"uid": "github/BMCV/galaxy-image-analysis", "html_url": "https://rseng.github.io/software/repository/github/BMCV/galaxy-image-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/galaxy-image-analysis"}, {"uid": "github/nlesc-sherlock/emma", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/emma", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/emma"}, {"uid": "github/nlesc-sherlock/Rig", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/Rig", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/Rig"}, {"uid": "github/kazewong/flowMC", "html_url": "https://rseng.github.io/software/repository/github/kazewong/flowMC", "api_url": "https://rseng.github.io/software/api/repos/github/kazewong/flowMC"}, {"uid": "github/igmhub/ForestFlow", "html_url": "https://rseng.github.io/software/repository/github/igmhub/ForestFlow", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/ForestFlow"}, {"uid": "github/igmhub/LyaCoLoRe", "html_url": "https://rseng.github.io/software/repository/github/igmhub/LyaCoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/LyaCoLoRe"}, {"uid": "github/igmhub/baofit", "html_url": "https://rseng.github.io/software/repository/github/igmhub/baofit", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/baofit"}, {"uid": "github/igmhub/picca", "html_url": "https://rseng.github.io/software/repository/github/igmhub/picca", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/picca"}, {"uid": "github/jollejolles/pirecorder", "html_url": "https://rseng.github.io/software/repository/github/jollejolles/pirecorder", "api_url": "https://rseng.github.io/software/api/repos/github/jollejolles/pirecorder"}, {"uid": "github/AlexanderLabWHOI/EUKulele", "html_url": "https://rseng.github.io/software/repository/github/AlexanderLabWHOI/EUKulele", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderLabWHOI/EUKulele"}, {"uid": "github/thachnguyen/CRISPRnano", "html_url": "https://rseng.github.io/software/repository/github/thachnguyen/CRISPRnano", "api_url": "https://rseng.github.io/software/api/repos/github/thachnguyen/CRISPRnano"}, {"uid": "github/bayesn/bayesn", "html_url": "https://rseng.github.io/software/repository/github/bayesn/bayesn", "api_url": "https://rseng.github.io/software/api/repos/github/bayesn/bayesn"}, {"uid": "github/Magritte-code/Magritte", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/Magritte", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/Magritte"}, {"uid": "github/Magritte-code/pomme", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/pomme", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/pomme"}, {"uid": "github/mrc-ide/rrq", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/rrq", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/rrq"}, {"uid": "github/mrc-ide/covid19-forecasts-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid19-forecasts-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid19-forecasts-orderly"}, {"uid": "github/mrc-ide/EpiEstim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/EpiEstim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/EpiEstim"}, {"uid": "github/mrc-ide/PhyDyn", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PhyDyn", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PhyDyn"}, {"uid": "github/mrc-ide/ring", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/ring", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/ring"}, {"uid": "github/mrc-ide/cinterpolate", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/cinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/cinterpolate"}, {"uid": "github/mrc-ide/global-lmic-reports-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/global-lmic-reports-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/global-lmic-reports-orderly"}, {"uid": "github/mrc-ide/dust", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dust", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dust"}, {"uid": "github/mrc-ide/dde", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dde", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dde"}, {"uid": "github/mrc-ide/individual", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/individual", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/individual"}, {"uid": "github/mrc-ide/provisionr", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/provisionr", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/provisionr"}, {"uid": "github/mrc-ide/sircovid", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/sircovid", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/sircovid"}, {"uid": "github/mrc-ide/squire", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/squire", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/squire"}, {"uid": "github/mrc-ide/odin", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/odin", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/odin"}, {"uid": "github/mrc-ide/PlasmoMAPI", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PlasmoMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PlasmoMAPI"}, {"uid": "github/mrc-ide/drjacoby", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/drjacoby", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/drjacoby"}, {"uid": "github/mrc-ide/covid-sim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid-sim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid-sim"}, {"uid": "github/tvwenger/millennium-tap-query", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/millennium-tap-query", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/millennium-tap-query"}, {"uid": "github/tvwenger/kd", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kd", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kd"}, {"uid": "github/tvwenger/HII-Region-Models", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/HII-Region-Models", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/HII-Region-Models"}, {"uid": "github/tvwenger/tmbidl", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/tmbidl", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/tmbidl"}, {"uid": "github/tvwenger/wisp", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/wisp", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/wisp"}, {"uid": "github/tvwenger/kinematic_scaleheight", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kinematic_scaleheight", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kinematic_scaleheight"}, {"uid": "github/tvwenger/hii-region-kinematics", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/hii-region-kinematics", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/hii-region-kinematics"}, {"uid": "github/tvwenger/bayes_spec", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/bayes_spec", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/bayes_spec"}, {"uid": "github/stamatak/AxPcoords.dist", "html_url": "https://rseng.github.io/software/repository/github/stamatak/AxPcoords.dist", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/AxPcoords.dist"}, {"uid": "github/stamatak/ExaML", "html_url": "https://rseng.github.io/software/repository/github/stamatak/ExaML", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/ExaML"}, {"uid": "github/PatrickJTaylor/pengWann", "html_url": "https://rseng.github.io/software/repository/github/PatrickJTaylor/pengWann", "api_url": "https://rseng.github.io/software/api/repos/github/PatrickJTaylor/pengWann"}, {"uid": "github/wiederm/transformato", "html_url": "https://rseng.github.io/software/repository/github/wiederm/transformato", "api_url": "https://rseng.github.io/software/api/repos/github/wiederm/transformato"}, {"uid": "github/GaryBAYLOR/mixR", "html_url": "https://rseng.github.io/software/repository/github/GaryBAYLOR/mixR", "api_url": "https://rseng.github.io/software/api/repos/github/GaryBAYLOR/mixR"}, {"uid": "github/barentsen/k2flix", "html_url": "https://rseng.github.io/software/repository/github/barentsen/k2flix", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/k2flix"}, {"uid": "github/barentsen/dave", "html_url": "https://rseng.github.io/software/repository/github/barentsen/dave", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/dave"}, {"uid": "github/kavir1698/EvoDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/kavir1698/EvoDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kavir1698/EvoDynamics.jl"}, {"uid": "github/DJArmstrong/TransitSOM", "html_url": "https://rseng.github.io/software/repository/github/DJArmstrong/TransitSOM", "api_url": "https://rseng.github.io/software/api/repos/github/DJArmstrong/TransitSOM"}, {"uid": "github/kkjawz/coref-ee", "html_url": "https://rseng.github.io/software/repository/github/kkjawz/coref-ee", "api_url": "https://rseng.github.io/software/api/repos/github/kkjawz/coref-ee"}, {"uid": "github/darrenjw/jax-smfsb", "html_url": "https://rseng.github.io/software/repository/github/darrenjw/jax-smfsb", "api_url": "https://rseng.github.io/software/api/repos/github/darrenjw/jax-smfsb"}, {"uid": "github/nikhil-sarin/redback", "html_url": "https://rseng.github.io/software/repository/github/nikhil-sarin/redback", "api_url": "https://rseng.github.io/software/api/repos/github/nikhil-sarin/redback"}, {"uid": "github/VIB-PSB/MINI-EX", "html_url": "https://rseng.github.io/software/repository/github/VIB-PSB/MINI-EX", "api_url": "https://rseng.github.io/software/api/repos/github/VIB-PSB/MINI-EX"}, {"uid": "github/fermo-metabolomics/fermo_core", "html_url": "https://rseng.github.io/software/repository/github/fermo-metabolomics/fermo_core", "api_url": "https://rseng.github.io/software/api/repos/github/fermo-metabolomics/fermo_core"}, {"uid": "github/davi-rodrigues/NAVanalysis", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/NAVanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/NAVanalysis"}, {"uid": "github/davi-rodrigues/CCBH-Numerics", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/CCBH-Numerics", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/CCBH-Numerics"}, {"uid": "github/tesselle/aion", "html_url": "https://rseng.github.io/software/repository/github/tesselle/aion", "api_url": "https://rseng.github.io/software/api/repos/github/tesselle/aion"}, {"uid": "github/soraxas/sbp-env", "html_url": "https://rseng.github.io/software/repository/github/soraxas/sbp-env", "api_url": "https://rseng.github.io/software/api/repos/github/soraxas/sbp-env"}, {"uid": "github/wbalmer/backtrack", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtrack", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtrack"}, {"uid": "github/wbalmer/backtracks", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtracks", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtracks"}, {"uid": "github/ArtificialStellarPopulations/ArtPop", "html_url": "https://rseng.github.io/software/repository/github/ArtificialStellarPopulations/ArtPop", "api_url": "https://rseng.github.io/software/api/repos/github/ArtificialStellarPopulations/ArtPop"}, {"uid": "github/jonschwenk/RivGraph", "html_url": "https://rseng.github.io/software/repository/github/jonschwenk/RivGraph", "api_url": "https://rseng.github.io/software/api/repos/github/jonschwenk/RivGraph"}, {"uid": "github/ZacharyJia/opsdn", "html_url": "https://rseng.github.io/software/repository/github/ZacharyJia/opsdn", "api_url": "https://rseng.github.io/software/api/repos/github/ZacharyJia/opsdn"}, {"uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", "html_url": "https://rseng.github.io/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", "api_url": "https://rseng.github.io/software/api/repos/github/MehrnooshTahani/MappingBLOS_MolecularClouds"}, {"uid": "github/xiaotiand/FunFor", "html_url": "https://rseng.github.io/software/repository/github/xiaotiand/FunFor", "api_url": "https://rseng.github.io/software/api/repos/github/xiaotiand/FunFor"}, {"uid": "github/dpseidel/stmove", "html_url": "https://rseng.github.io/software/repository/github/dpseidel/stmove", "api_url": "https://rseng.github.io/software/api/repos/github/dpseidel/stmove"}, {"uid": "github/tahirulqamar/Deep-HPI-pred", "html_url": "https://rseng.github.io/software/repository/github/tahirulqamar/Deep-HPI-pred", "api_url": "https://rseng.github.io/software/api/repos/github/tahirulqamar/Deep-HPI-pred"}, {"uid": "github/MickaelRigault/skysurvey", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/skysurvey", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/skysurvey"}, {"uid": "github/MickaelRigault/ztfquery", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/ztfquery", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/ztfquery"}, {"uid": "github/NERC-CEH/RMAVIS", "html_url": "https://rseng.github.io/software/repository/github/NERC-CEH/RMAVIS", "api_url": "https://rseng.github.io/software/api/repos/github/NERC-CEH/RMAVIS"}, {"uid": "github/dpalmasan/TRUNAJOD2.0", "html_url": "https://rseng.github.io/software/repository/github/dpalmasan/TRUNAJOD2.0", "api_url": "https://rseng.github.io/software/api/repos/github/dpalmasan/TRUNAJOD2.0"}, {"uid": "github/SHTOOLS/SHTOOLS", "html_url": "https://rseng.github.io/software/repository/github/SHTOOLS/SHTOOLS", "api_url": "https://rseng.github.io/software/api/repos/github/SHTOOLS/SHTOOLS"}, {"uid": "github/Merck/BioPhi", "html_url": "https://rseng.github.io/software/repository/github/Merck/BioPhi", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/BioPhi"}, {"uid": "github/Merck/pkglite", "html_url": "https://rseng.github.io/software/repository/github/Merck/pkglite", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/pkglite"}, {"uid": "github/franpoz/SHERLOCK", "html_url": "https://rseng.github.io/software/repository/github/franpoz/SHERLOCK", "api_url": "https://rseng.github.io/software/api/repos/github/franpoz/SHERLOCK"}, {"uid": "github/stegmaja/TSE", "html_url": "https://rseng.github.io/software/repository/github/stegmaja/TSE", "api_url": "https://rseng.github.io/software/api/repos/github/stegmaja/TSE"}, {"uid": "github/engyasin/Offline_MOT", "html_url": "https://rseng.github.io/software/repository/github/engyasin/Offline_MOT", "api_url": "https://rseng.github.io/software/api/repos/github/engyasin/Offline_MOT"}, {"uid": "github/DZeevi-Lab/TinkerHap", "html_url": "https://rseng.github.io/software/repository/github/DZeevi-Lab/TinkerHap", "api_url": "https://rseng.github.io/software/api/repos/github/DZeevi-Lab/TinkerHap"}, {"uid": "github/nlesc/embodied-emotions-scripts", "html_url": "https://rseng.github.io/software/repository/github/nlesc/embodied-emotions-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/embodied-emotions-scripts"}, {"uid": "github/nlesc/scriptcwl", "html_url": "https://rseng.github.io/software/repository/github/nlesc/scriptcwl", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/scriptcwl"}, {"uid": "github/ComparativeGenomicsToolkit/cactus", "html_url": "https://rseng.github.io/software/repository/github/ComparativeGenomicsToolkit/cactus", "api_url": "https://rseng.github.io/software/api/repos/github/ComparativeGenomicsToolkit/cactus"}, {"uid": "github/brinckmann/montepython_public", "html_url": "https://rseng.github.io/software/repository/github/brinckmann/montepython_public", "api_url": "https://rseng.github.io/software/api/repos/github/brinckmann/montepython_public"}, {"uid": "github/ivadomed/ivadomed", "html_url": "https://rseng.github.io/software/repository/github/ivadomed/ivadomed", "api_url": "https://rseng.github.io/software/api/repos/github/ivadomed/ivadomed"}, {"uid": "github/sanger-pathogens/Artemis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Artemis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Artemis"}, {"uid": "github/sanger-pathogens/ariba", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/ariba", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/ariba"}, {"uid": "github/sanger-pathogens/assembly-stats", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/assembly-stats", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/assembly-stats"}, {"uid": "github/sanger-pathogens/pymummer", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/pymummer", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/pymummer"}, {"uid": "github/sanger-pathogens/snp-sites", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/snp-sites", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/snp-sites"}, {"uid": "github/sanger-pathogens/circlator", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/circlator", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/circlator"}, {"uid": "github/sanger-pathogens/Roary", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Roary", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Roary"}, {"uid": "github/sanger-pathogens/gubbins", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/gubbins", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/gubbins"}, {"uid": "github/sanger-pathogens/Bio-Tradis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Bio-Tradis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Bio-Tradis"}, {"uid": "github/sanger-pathogens/iva", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/iva", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/iva"}, {"uid": "github/sanger-pathogens/Fastaq", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Fastaq", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Fastaq"}, {"uid": "github/swiftbiosciences/primerclip", "html_url": "https://rseng.github.io/software/repository/github/swiftbiosciences/primerclip", "api_url": "https://rseng.github.io/software/api/repos/github/swiftbiosciences/primerclip"}, {"uid": "github/tatekawa-astron/PN", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/PN", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/PN"}, {"uid": "github/tatekawa-astron/3LPT-init", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/3LPT-init", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/3LPT-init"}, {"uid": "github/ericcombiolab/LRTK", "html_url": "https://rseng.github.io/software/repository/github/ericcombiolab/LRTK", "api_url": "https://rseng.github.io/software/api/repos/github/ericcombiolab/LRTK"}, {"uid": "github/ropensci/DataSpaceR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataSpaceR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataSpaceR"}, {"uid": "github/ropensci/restez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/restez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/restez"}, {"uid": "github/ropensci/rgpdd", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgpdd", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgpdd"}, {"uid": "github/ropensci/tiler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tiler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tiler"}, {"uid": "github/ropensci/bomrang", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bomrang", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bomrang"}, {"uid": "github/ropensci/brranching", "html_url": "https://rseng.github.io/software/repository/github/ropensci/brranching", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/brranching"}, {"uid": "github/ropensci/SymbiotaR2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/SymbiotaR2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/SymbiotaR2"}, {"uid": "github/ropensci/gittargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gittargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gittargets"}, {"uid": "github/ropensci/tidypmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidypmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidypmc"}, {"uid": "github/ropensci/bikedata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bikedata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bikedata"}, {"uid": "github/ropensci/datapack", "html_url": "https://rseng.github.io/software/repository/github/ropensci/datapack", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/datapack"}, {"uid": "github/ropensci/textreuse", "html_url": "https://rseng.github.io/software/repository/github/ropensci/textreuse", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/textreuse"}, {"uid": "github/ropensci/opentripplanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opentripplanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opentripplanner"}, {"uid": "github/ropensci/cchecks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cchecks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cchecks"}, {"uid": "github/ropensci/smapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/smapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/smapr"}, {"uid": "github/ropensci/osmextract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmextract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmextract"}, {"uid": "github/ropensci/xslt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/xslt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/xslt"}, {"uid": "github/ropensci/zbank", "html_url": "https://rseng.github.io/software/repository/github/ropensci/zbank", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/zbank"}, {"uid": "github/ropensci/tarchetypes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tarchetypes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tarchetypes"}, {"uid": "github/ropensci/wellknown", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wellknown", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wellknown"}, {"uid": "github/ropensci/treebase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treebase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treebase"}, {"uid": "github/ropensci/pubchunks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pubchunks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pubchunks"}, {"uid": "github/ropensci/dbhydroR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbhydroR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbhydroR"}, {"uid": "github/ropensci/photosearcher", "html_url": "https://rseng.github.io/software/repository/github/ropensci/photosearcher", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/photosearcher"}, {"uid": "github/ropensci/rtweet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtweet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtweet"}, {"uid": "github/ropensci/microdemic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/microdemic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/microdemic"}, {"uid": "github/ropensci/webmockr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webmockr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webmockr"}, {"uid": "github/ropensci/comtradr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/comtradr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/comtradr"}, {"uid": "github/ropensci/wikitaxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wikitaxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wikitaxa"}, {"uid": "github/ropensci/dittodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dittodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dittodb"}, {"uid": "github/ropensci/chlorpromazineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chlorpromazineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chlorpromazineR"}, {"uid": "github/ropensci/rnaturalearthhires", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthhires", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthhires"}, {"uid": "github/ropensci/rmangal", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rmangal", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rmangal"}, {"uid": "github/ropensci/jstor", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jstor", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jstor"}, {"uid": "github/ropensci/traits", "html_url": "https://rseng.github.io/software/repository/github/ropensci/traits", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/traits"}, {"uid": "github/ropensci/cleanEHR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cleanEHR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cleanEHR"}, {"uid": "github/ropensci/pathviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pathviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pathviewr"}, {"uid": "github/ropensci/tradestatistics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tradestatistics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tradestatistics"}, {"uid": "github/ropensci/rsnps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsnps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsnps"}, {"uid": "github/ropensci/ruODK", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ruODK", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ruODK"}, {"uid": "github/ropensci/dataaimsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataaimsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataaimsr"}, {"uid": "github/ropensci/rcites", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcites", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcites"}, {"uid": "github/ropensci/colocr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/colocr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/colocr"}, {"uid": "github/ropensci/mctq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mctq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mctq"}, {"uid": "github/ropensci/rfigshare", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfigshare", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfigshare"}, {"uid": "github/ropensci/prism", "html_url": "https://rseng.github.io/software/repository/github/ropensci/prism", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/prism"}, {"uid": "github/ropensci/osmapiR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmapiR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmapiR"}, {"uid": "github/ropensci/nomisr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nomisr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nomisr"}, {"uid": "github/ropensci/rdefra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdefra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdefra"}, {"uid": "github/ropensci/graphql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/graphql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/graphql"}, {"uid": "github/ropensci/EndoMineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EndoMineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EndoMineR"}, {"uid": "github/ropensci/rplos", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rplos", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rplos"}, {"uid": "github/ropensci/readODS", "html_url": "https://rseng.github.io/software/repository/github/ropensci/readODS", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/readODS"}, {"uid": "github/ropensci/rWBclimate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rWBclimate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rWBclimate"}, {"uid": "github/ropensci/ckanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ckanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ckanr"}, {"uid": "github/ropensci/stats19", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stats19", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stats19"}, {"uid": "github/ropensci/DoOR.data", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.data", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.data"}, {"uid": "github/ropensci/sofa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/sofa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/sofa"}, {"uid": "github/ropensci/trufflesniffer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/trufflesniffer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/trufflesniffer"}, {"uid": "github/ropensci/GSODR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/GSODR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/GSODR"}, {"uid": "github/ropensci/outcomerate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outcomerate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outcomerate"}, {"uid": "github/ropensci/elastic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/elastic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/elastic"}, {"uid": "github/ropensci/visdat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/visdat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/visdat"}, {"uid": "github/ropensci/phylogram", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylogram", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylogram"}, {"uid": "github/ropensci/unrtf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unrtf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unrtf"}, {"uid": "github/ropensci/weathercan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weathercan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weathercan"}, {"uid": "github/ropensci/rrlite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrlite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrlite"}, {"uid": "github/ropensci/c14bazAAR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c14bazAAR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c14bazAAR"}, {"uid": "github/ropensci/rtika", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtika", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtika"}, {"uid": "github/ropensci/rbhl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbhl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbhl"}, {"uid": "github/ropensci/refimpact", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refimpact", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refimpact"}, {"uid": "github/ropensci/predictNMB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/predictNMB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/predictNMB"}, {"uid": "github/ropensci/bib2df", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bib2df", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bib2df"}, {"uid": "github/ropensci/MODISTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODISTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODISTools"}, {"uid": "github/ropensci/spiro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spiro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spiro"}, {"uid": "github/ropensci/tesseract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tesseract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tesseract"}, {"uid": "github/ropensci/getlandsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getlandsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getlandsat"}, {"uid": "github/ropensci/rAltmetric", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAltmetric", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAltmetric"}, {"uid": "github/ropensci/NLMR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/NLMR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/NLMR"}, {"uid": "github/ropensci/lightr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lightr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lightr"}, {"uid": "github/ropensci/gutenbergr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gutenbergr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gutenbergr"}, {"uid": "github/ropensci/rnassqs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnassqs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnassqs"}, {"uid": "github/ropensci/RSelenium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RSelenium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RSelenium"}, {"uid": "github/ropensci/rfishbase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfishbase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfishbase"}, {"uid": "github/ropensci/piggyback", "html_url": "https://rseng.github.io/software/repository/github/ropensci/piggyback", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/piggyback"}, {"uid": "github/ropensci/rdatacite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdatacite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdatacite"}, {"uid": "github/ropensci/pdftools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pdftools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pdftools"}, {"uid": "github/ropensci/rfema", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfema", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfema"}, {"uid": "github/ropensci/worrms", "html_url": "https://rseng.github.io/software/repository/github/ropensci/worrms", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/worrms"}, {"uid": "github/ropensci/grainchanger", "html_url": "https://rseng.github.io/software/repository/github/ropensci/grainchanger", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/grainchanger"}, {"uid": "github/ropensci/rAvis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAvis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAvis"}, {"uid": "github/ropensci/conditionz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/conditionz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/conditionz"}, {"uid": "github/ropensci/antiword", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antiword", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antiword"}, {"uid": "github/ropensci/skimr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skimr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skimr"}, {"uid": "github/ropensci/rnoaa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnoaa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnoaa"}, {"uid": "github/ropensci/plotly", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plotly", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plotly"}, {"uid": "github/ropensci/pangaear", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pangaear", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pangaear"}, {"uid": "github/ropensci/fingertipsR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fingertipsR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fingertipsR"}, {"uid": "github/ropensci/treestartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treestartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treestartr"}, {"uid": "github/ropensci/rnaturalearth", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearth", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearth"}, {"uid": "github/ropensci/gistr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gistr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gistr"}, {"uid": "github/ropensci/UCSCXenaTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/UCSCXenaTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/UCSCXenaTools"}, {"uid": "github/ropensci/rentrez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rentrez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rentrez"}, {"uid": "github/ropensci/stplanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stplanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stplanr"}, {"uid": "github/ropensci/pixelclasser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pixelclasser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pixelclasser"}, {"uid": "github/ropensci/ritis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ritis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ritis"}, {"uid": "github/ropensci/arkdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/arkdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/arkdb"}, {"uid": "github/ropensci/cffr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cffr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cffr"}, {"uid": "github/ropensci/isdparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/isdparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/isdparser"}, {"uid": "github/ropensci/antanym", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antanym", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antanym"}, {"uid": "github/ropensci/rnpn", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnpn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnpn"}, {"uid": "github/ropensci/mapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapr"}, {"uid": "github/ropensci/rusda", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rusda", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rusda"}, {"uid": "github/ropensci/jsonvalidate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonvalidate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonvalidate"}, {"uid": "github/ropensci/rinat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rinat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rinat"}, {"uid": "github/ropensci/unifir", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unifir", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unifir"}, {"uid": "github/ropensci/cyphr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cyphr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cyphr"}, {"uid": "github/ropensci/AntWeb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/AntWeb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/AntWeb"}, {"uid": "github/ropensci/wdman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wdman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wdman"}, {"uid": "github/ropensci/taxlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxlist"}, {"uid": "github/ropensci/outsider.base", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.base", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.base"}, {"uid": "github/ropensci/chromer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chromer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chromer"}, {"uid": "github/ropensci/ijtiff", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ijtiff", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ijtiff"}, {"uid": "github/ropensci/tacmagic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tacmagic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tacmagic"}, {"uid": "github/ropensci/gitignore", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gitignore", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gitignore"}, {"uid": "github/ropensci/osfr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osfr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osfr"}, {"uid": "github/ropensci/bold", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bold", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bold"}, {"uid": "github/ropensci/allodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/allodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/allodb"}, {"uid": "github/ropensci/tracerer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tracerer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tracerer"}, {"uid": "github/ropensci/internetarchive", "html_url": "https://rseng.github.io/software/repository/github/ropensci/internetarchive", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/internetarchive"}, {"uid": "github/ropensci/historydata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/historydata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/historydata"}, {"uid": "github/ropensci/dataspice", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataspice", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataspice"}, {"uid": "github/ropensci/nbaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nbaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nbaR"}, {"uid": "github/ropensci/rcrossref", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcrossref", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcrossref"}, {"uid": "github/ropensci/av", "html_url": "https://rseng.github.io/software/repository/github/ropensci/av", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/av"}, {"uid": "github/ropensci/katex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/katex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/katex"}, {"uid": "github/ropensci/DataPackageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataPackageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataPackageR"}, {"uid": "github/ropensci/babette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/babette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/babette"}, {"uid": "github/ropensci/weatherOz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weatherOz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weatherOz"}, {"uid": "github/ropensci/natserv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/natserv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/natserv"}, {"uid": "github/ropensci/rgbif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgbif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgbif"}, {"uid": "github/ropensci/charlatan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/charlatan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/charlatan"}, {"uid": "github/ropensci/rredlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rredlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rredlist"}, {"uid": "github/ropensci/robotstxt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/robotstxt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/robotstxt"}, {"uid": "github/ropensci/ecoengine", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ecoengine", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ecoengine"}, {"uid": "github/ropensci/rppo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rppo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rppo"}, {"uid": "github/ropensci/emld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/emld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/emld"}, {"uid": "github/ropensci/gtexr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtexr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtexr"}, {"uid": "github/ropensci/epubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/epubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/epubr"}, {"uid": "github/ropensci/tif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tif"}, {"uid": "github/ropensci/qpdf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qpdf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qpdf"}, {"uid": "github/ropensci/rrricanes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanes"}, {"uid": "github/ropensci/opencv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencv"}, {"uid": "github/ropensci/refsplitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refsplitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refsplitr"}, {"uid": "github/ropensci/beautier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beautier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beautier"}, {"uid": "github/ropensci/magick", "html_url": "https://rseng.github.io/software/repository/github/ropensci/magick", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/magick"}, {"uid": "github/ropensci/rdhs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdhs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdhs"}, {"uid": "github/ropensci/exoplanets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/exoplanets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/exoplanets"}, {"uid": "github/ropensci/ghql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ghql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ghql"}, {"uid": "github/ropensci/treedata.table", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treedata.table", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treedata.table"}, {"uid": "github/ropensci/hunspell", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hunspell", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hunspell"}, {"uid": "github/ropensci/tidync", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidync", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidync"}, {"uid": "github/ropensci/essurvey", "html_url": "https://rseng.github.io/software/repository/github/ropensci/essurvey", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/essurvey"}, {"uid": "github/ropensci/mcbette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mcbette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mcbette"}, {"uid": "github/ropensci/rromeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rromeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rromeo"}, {"uid": "github/ropensci/suppdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/suppdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/suppdata"}, {"uid": "github/ropensci/circle", "html_url": "https://rseng.github.io/software/repository/github/ropensci/circle", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/circle"}, {"uid": "github/ropensci/helminthR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/helminthR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/helminthR"}, {"uid": "github/ropensci/googleLanguageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/googleLanguageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/googleLanguageR"}, {"uid": "github/ropensci/staypuft", "html_url": "https://rseng.github.io/software/repository/github/ropensci/staypuft", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/staypuft"}, {"uid": "github/ropensci/solrium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/solrium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/solrium"}, {"uid": "github/ropensci/DoOR.functions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.functions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.functions"}, {"uid": "github/ropensci/tidyhydat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyhydat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyhydat"}, {"uid": "github/ropensci/hddtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hddtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hddtools"}, {"uid": "github/ropensci/rebird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rebird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rebird"}, {"uid": "github/ropensci/qualtRics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qualtRics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qualtRics"}, {"uid": "github/ropensci/cld2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld2"}, {"uid": "github/ropensci/getCRUCLdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getCRUCLdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getCRUCLdata"}, {"uid": "github/ropensci/cld3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld3"}, {"uid": "github/ropensci/tic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tic"}, {"uid": "github/ropensci/gtfsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtfsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtfsr"}, {"uid": "github/ropensci/namext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/namext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/namext"}, {"uid": "github/ropensci/excluder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/excluder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/excluder"}, {"uid": "github/ropensci/taxview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxview"}, {"uid": "github/ropensci/paleobioDB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/paleobioDB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/paleobioDB"}, {"uid": "github/ropensci/RefManageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RefManageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RefManageR"}, {"uid": "github/ropensci/taxadb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxadb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxadb"}, {"uid": "github/ropensci/rcoreoa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcoreoa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcoreoa"}, {"uid": "github/ropensci/bibtex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bibtex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bibtex"}, {"uid": "github/ropensci/ssh", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ssh", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ssh"}, {"uid": "github/ropensci/assertr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/assertr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/assertr"}, {"uid": "github/ropensci/eia", "html_url": "https://rseng.github.io/software/repository/github/ropensci/eia", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/eia"}, {"uid": "github/ropensci/webchem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webchem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webchem"}, {"uid": "github/ropensci/spocc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spocc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spocc"}, {"uid": "github/ropensci/daiquiri", "html_url": "https://rseng.github.io/software/repository/github/ropensci/daiquiri", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/daiquiri"}, {"uid": "github/ropensci/medrxivr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/medrxivr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/medrxivr"}, {"uid": "github/ropensci/rsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsat"}, {"uid": "github/ropensci/drake", "html_url": "https://rseng.github.io/software/repository/github/ropensci/drake", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/drake"}, {"uid": "github/ropensci/rOPTRAM", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rOPTRAM", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rOPTRAM"}, {"uid": "github/ropensci/biomartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/biomartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/biomartr"}, {"uid": "github/ropensci/jqr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jqr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jqr"}, {"uid": "github/ropensci/onekp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/onekp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/onekp"}, {"uid": "github/ropensci/citesdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citesdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citesdb"}, {"uid": "github/ropensci/FedData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/FedData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/FedData"}, {"uid": "github/ropensci/taxizedb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxizedb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxizedb"}, {"uid": "github/ropensci/hydroscoper", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hydroscoper", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hydroscoper"}, {"uid": "github/ropensci/rorcid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rorcid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rorcid"}, {"uid": "github/ropensci/cde", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cde", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cde"}, {"uid": "github/ropensci/rzmq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rzmq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rzmq"}, {"uid": "github/ropensci/chirps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chirps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chirps"}, {"uid": "github/ropensci/bowerbird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bowerbird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bowerbird"}, {"uid": "github/ropensci/targets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/targets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/targets"}, {"uid": "github/ropensci/nasapower", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nasapower", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nasapower"}, {"uid": "github/ropensci/riem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/riem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/riem"}, {"uid": "github/ropensci/nodbi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nodbi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nodbi"}, {"uid": "github/ropensci/randgeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/randgeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/randgeo"}, {"uid": "github/ropensci/lingtypology", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lingtypology", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lingtypology"}, {"uid": "github/ropensci/tidyqpcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyqpcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyqpcr"}, {"uid": "github/ropensci/oai", "html_url": "https://rseng.github.io/software/repository/github/ropensci/oai", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/oai"}, {"uid": "github/ropensci/rrricanesdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanesdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanesdata"}, {"uid": "github/ropensci/codemetar", "html_url": "https://rseng.github.io/software/repository/github/ropensci/codemetar", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/codemetar"}, {"uid": "github/ropensci/geojsonlint", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonlint", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonlint"}, {"uid": "github/ropensci/taxize", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxize", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxize"}, {"uid": "github/ropensci/mregions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mregions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mregions"}, {"uid": "github/ropensci/opencage", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencage", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencage"}, {"uid": "github/ropensci/slopes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/slopes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/slopes"}, {"uid": "github/ropensci/coder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/coder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/coder"}, {"uid": "github/ropensci/addressable", "html_url": "https://rseng.github.io/software/repository/github/ropensci/addressable", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/addressable"}, {"uid": "github/ropensci/rb3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rb3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rb3"}, {"uid": "github/ropensci/hoardr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hoardr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hoardr"}, {"uid": "github/ropensci/camsRad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/camsRad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/camsRad"}, {"uid": "github/ropensci/rperseus", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rperseus", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rperseus"}, {"uid": "github/ropensci/ots", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ots", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ots"}, {"uid": "github/ropensci/gigs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gigs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gigs"}, {"uid": "github/ropensci/handlr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/handlr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/handlr"}, {"uid": "github/ropensci/taxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxa"}, {"uid": "github/ropensci/Rpolyhedra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rpolyhedra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rpolyhedra"}, {"uid": "github/ropensci/pendulum", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pendulum"}, {"uid": "github/ropensci/fauxpas", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fauxpas", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fauxpas"}, {"uid": "github/ropensci/PostcodesioR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/PostcodesioR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/PostcodesioR"}, {"uid": "github/ropensci/workloopR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/workloopR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/workloopR"}, {"uid": "github/ropensci/clifro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/clifro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/clifro"}, {"uid": "github/ropensci/rotl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rotl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rotl"}, {"uid": "github/ropensci/finch", "html_url": "https://rseng.github.io/software/repository/github/ropensci/finch", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/finch"}, {"uid": "github/ropensci/rdflib", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdflib", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdflib"}, {"uid": "github/ropensci/parzer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/parzer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/parzer"}, {"uid": "github/ropensci/rbace", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbace", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbace"}, {"uid": "github/ropensci/infx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/infx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/infx"}, {"uid": "github/ropensci/fireexposuR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fireexposuR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fireexposuR"}, {"uid": "github/ropensci/Rclean", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rclean", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rclean"}, {"uid": "github/ropensci/tabulizer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tabulizer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tabulizer"}, {"uid": "github/ropensci/BaseSet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/BaseSet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/BaseSet"}, {"uid": "github/ropensci/spelling", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spelling", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spelling"}, {"uid": "github/ropensci/vcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/vcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/vcr"}, {"uid": "github/ropensci/roadoi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/roadoi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/roadoi"}, {"uid": "github/ropensci/baRcodeR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/baRcodeR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/baRcodeR"}, {"uid": "github/ropensci/USAboundariesData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundariesData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundariesData"}, {"uid": "github/ropensci/ezknitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ezknitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ezknitr"}, {"uid": "github/ropensci/iheatmapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/iheatmapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/iheatmapr"}, {"uid": "github/ropensci/terrainr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/terrainr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/terrainr"}, {"uid": "github/ropensci/osmplotr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmplotr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmplotr"}, {"uid": "github/ropensci/wateRinfo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wateRinfo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wateRinfo"}, {"uid": "github/ropensci/cRegulome", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cRegulome", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cRegulome"}, {"uid": "github/ropensci/awardFindR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/awardFindR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/awardFindR"}, {"uid": "github/ropensci/phylotaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylotaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylotaR"}, {"uid": "github/ropensci/git2r", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2r", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2r"}, {"uid": "github/ropensci/citecorp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citecorp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citecorp"}, {"uid": "github/ropensci/scrubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/scrubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/scrubr"}, {"uid": "github/ropensci/gpg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gpg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gpg"}, {"uid": "github/ropensci/git2rdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2rdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2rdata"}, {"uid": "github/ropensci/writexl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/writexl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/writexl"}, {"uid": "github/ropensci/aRxiv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/aRxiv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/aRxiv"}, {"uid": "github/ropensci/RNeXML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RNeXML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RNeXML"}, {"uid": "github/ropensci/geojsonio", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonio", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonio"}, {"uid": "github/ropensci/bittrex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bittrex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bittrex"}, {"uid": "github/ropensci/osmdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmdata"}, {"uid": "github/ropensci/nlrx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nlrx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nlrx"}, {"uid": "github/ropensci/rgnparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgnparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgnparser"}, {"uid": "github/ropensci/censo2017", "html_url": "https://rseng.github.io/software/repository/github/ropensci/censo2017", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/censo2017"}, {"uid": "github/ropensci/rdataretriever", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdataretriever", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdataretriever"}, {"uid": "github/ropensci/MtreeRing", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MtreeRing", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MtreeRing"}, {"uid": "github/ropensci/rcol", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcol", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcol"}, {"uid": "github/ropensci/neotoma", "html_url": "https://rseng.github.io/software/repository/github/ropensci/neotoma", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/neotoma"}, {"uid": "github/ropensci/outsider", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider"}, {"uid": "github/ropensci/rdryad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdryad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdryad"}, {"uid": "github/ropensci/USAboundaries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundaries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundaries"}, {"uid": "github/ropensci/beastier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beastier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beastier"}, {"uid": "github/ropensci/opencontext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencontext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencontext"}, {"uid": "github/ropensci/virtuoso", "html_url": "https://rseng.github.io/software/repository/github/ropensci/virtuoso", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/virtuoso"}, {"uid": "github/ropensci/skynet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skynet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skynet"}, {"uid": "github/ropensci/outsider.devtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.devtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.devtools"}, {"uid": "github/ropensci/phylocomr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylocomr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylocomr"}, {"uid": "github/ropensci/crul", "html_url": "https://rseng.github.io/software/repository/github/ropensci/crul", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/crul"}, {"uid": "github/ropensci/phonfieldwork", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phonfieldwork", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phonfieldwork"}, {"uid": "github/ropensci/fulltext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fulltext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fulltext"}, {"uid": "github/ropensci/plater", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plater", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plater"}, {"uid": "github/ropensci/rglobi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rglobi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rglobi"}, {"uid": "github/ropensci/landscapetools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/landscapetools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/landscapetools"}, {"uid": "github/ropensci/patentsview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/patentsview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/patentsview"}, {"uid": "github/ropensci/MODIStsp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODIStsp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODIStsp"}, {"uid": "github/ropensci/binman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/binman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/binman"}, {"uid": "github/ropensci/tokenizers", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tokenizers", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tokenizers"}, {"uid": "github/ropensci/jenkins", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jenkins", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jenkins"}, {"uid": "github/ropensci/mapscanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapscanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapscanner"}, {"uid": "github/ropensci/rsvg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsvg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsvg"}, {"uid": "github/ropensci/jsonld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonld"}, {"uid": "github/ropensci/spatsoc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spatsoc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spatsoc"}, {"uid": "github/ropensci/popler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/popler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/popler"}, {"uid": "github/ropensci/geonames", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geonames", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geonames"}, {"uid": "github/ropensci/rcitoid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcitoid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcitoid"}, {"uid": "github/ropensci/tinkr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tinkr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tinkr"}, {"uid": "github/ropensci/jagstargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jagstargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jagstargets"}, {"uid": "github/ropensci/europepmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/europepmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/europepmc"}, {"uid": "github/ropensci/EML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EML"}, {"uid": "github/ropensci/ramlegacy", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ramlegacy", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ramlegacy"}, {"uid": "github/ropensci/dbparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbparser"}, {"uid": "github/ropensci/rvertnet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rvertnet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rvertnet"}, {"uid": "github/ropensci/rnaturalearthdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthdata"}, {"uid": "github/ropensci/rerddap", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rerddap", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rerddap"}, {"uid": "github/ropensci/mauricer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mauricer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mauricer"}, {"uid": "github/ropensci/rfisheries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfisheries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfisheries"}, {"uid": "github/ropensci/seasl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/seasl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/seasl"}, {"uid": "github/ropensci/CoordinateCleaner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/CoordinateCleaner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/CoordinateCleaner"}, {"uid": "github/ropensci/timefuzz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/timefuzz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/timefuzz"}, {"uid": "github/ropensci/stantargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stantargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stantargets"}, {"uid": "github/jsobeck/MOOG_SCAT", "html_url": "https://rseng.github.io/software/repository/github/jsobeck/MOOG_SCAT", "api_url": "https://rseng.github.io/software/api/repos/github/jsobeck/MOOG_SCAT"}, {"uid": "github/ot483/NetCom", "html_url": "https://rseng.github.io/software/repository/github/ot483/NetCom", "api_url": "https://rseng.github.io/software/api/repos/github/ot483/NetCom"}, {"uid": "github/chasmani/piecewise-regression", "html_url": "https://rseng.github.io/software/repository/github/chasmani/piecewise-regression", "api_url": "https://rseng.github.io/software/api/repos/github/chasmani/piecewise-regression"}, {"uid": "github/RenneLab/hybkit", "html_url": "https://rseng.github.io/software/repository/github/RenneLab/hybkit", "api_url": "https://rseng.github.io/software/api/repos/github/RenneLab/hybkit"}, {"uid": "github/jah1994/PyTorchDIA", "html_url": "https://rseng.github.io/software/repository/github/jah1994/PyTorchDIA", "api_url": "https://rseng.github.io/software/api/repos/github/jah1994/PyTorchDIA"}, {"uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole"}, {"uid": "github/eXtremeGravityInstitute/QuickCBC", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/QuickCBC", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/QuickCBC"}, {"uid": "github/cosmicrays/hermes", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/hermes", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/hermes"}, {"uid": "github/cosmicrays/DRAGON", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/DRAGON", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/DRAGON"}, {"uid": "github/amberbiology/scribl", "html_url": "https://rseng.github.io/software/repository/github/amberbiology/scribl", "api_url": "https://rseng.github.io/software/api/repos/github/amberbiology/scribl"}, {"uid": "github/ConorMacBride/mcalf", "html_url": "https://rseng.github.io/software/repository/github/ConorMacBride/mcalf", "api_url": "https://rseng.github.io/software/api/repos/github/ConorMacBride/mcalf"}, {"uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", "html_url": "https://rseng.github.io/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", "api_url": "https://rseng.github.io/software/api/repos/github/Muhammad-Arif-NUST/BVP_Pred_Unb"}, {"uid": "github/vfonov/DARQ", "html_url": "https://rseng.github.io/software/repository/github/vfonov/DARQ", "api_url": "https://rseng.github.io/software/api/repos/github/vfonov/DARQ"}, {"uid": "github/AninaTimmermann/ECCOplanets", "html_url": "https://rseng.github.io/software/repository/github/AninaTimmermann/ECCOplanets", "api_url": "https://rseng.github.io/software/api/repos/github/AninaTimmermann/ECCOplanets"}, {"uid": "github/haowang-astro/jetsimpy", "html_url": "https://rseng.github.io/software/repository/github/haowang-astro/jetsimpy", "api_url": "https://rseng.github.io/software/api/repos/github/haowang-astro/jetsimpy"}, {"uid": "github/cheng-zhao/FCFC", "html_url": "https://rseng.github.io/software/repository/github/cheng-zhao/FCFC", "api_url": "https://rseng.github.io/software/api/repos/github/cheng-zhao/FCFC"}, {"uid": "github/peikuan/WBBC", "html_url": "https://rseng.github.io/software/repository/github/peikuan/WBBC", "api_url": "https://rseng.github.io/software/api/repos/github/peikuan/WBBC"}, {"uid": "github/jeffdaily/parasail-python", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail-python", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail-python"}, {"uid": "github/jeffdaily/parasail", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail"}, {"uid": "github/MathynVanD/GraFIT", "html_url": "https://rseng.github.io/software/repository/github/MathynVanD/GraFIT", "api_url": "https://rseng.github.io/software/api/repos/github/MathynVanD/GraFIT"}, {"uid": "github/dbosul/CWITools", "html_url": "https://rseng.github.io/software/repository/github/dbosul/CWITools", "api_url": "https://rseng.github.io/software/api/repos/github/dbosul/CWITools"}, {"uid": "github/zhangjunpeng411/SCOM", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/SCOM", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/SCOM"}, {"uid": "github/zhangjunpeng411/Scan", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/Scan", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/Scan"}, {"uid": "github/dglaeser/gridformat", "html_url": "https://rseng.github.io/software/repository/github/dglaeser/gridformat", "api_url": "https://rseng.github.io/software/api/repos/github/dglaeser/gridformat"}, {"uid": "github/AdrianA-T/cytomorph", "html_url": "https://rseng.github.io/software/repository/github/AdrianA-T/cytomorph", "api_url": "https://rseng.github.io/software/api/repos/github/AdrianA-T/cytomorph"}, {"uid": "github/soerenslarsen/ISPy3", "html_url": "https://rseng.github.io/software/repository/github/soerenslarsen/ISPy3", "api_url": "https://rseng.github.io/software/api/repos/github/soerenslarsen/ISPy3"}, {"uid": "github/EOSC-LOFAR/lofar-ld", "html_url": "https://rseng.github.io/software/repository/github/EOSC-LOFAR/lofar-ld", "api_url": "https://rseng.github.io/software/api/repos/github/EOSC-LOFAR/lofar-ld"}, {"uid": "github/tinglabs/scAIDE", "html_url": "https://rseng.github.io/software/repository/github/tinglabs/scAIDE", "api_url": "https://rseng.github.io/software/api/repos/github/tinglabs/scAIDE"}, {"uid": "github/Zstone19/pypetal", "html_url": "https://rseng.github.io/software/repository/github/Zstone19/pypetal", "api_url": "https://rseng.github.io/software/api/repos/github/Zstone19/pypetal"}, {"uid": "github/wal-yan/target-methylseq-qc", "html_url": "https://rseng.github.io/software/repository/github/wal-yan/target-methylseq-qc", "api_url": "https://rseng.github.io/software/api/repos/github/wal-yan/target-methylseq-qc"}, {"uid": "github/agerada/AIgarMIC", "html_url": "https://rseng.github.io/software/repository/github/agerada/AIgarMIC", "api_url": "https://rseng.github.io/software/api/repos/github/agerada/AIgarMIC"}, {"uid": "github/Vini2/GraphBin", "html_url": "https://rseng.github.io/software/repository/github/Vini2/GraphBin", "api_url": "https://rseng.github.io/software/api/repos/github/Vini2/GraphBin"}, {"uid": "github/tkarwal/procoli", "html_url": "https://rseng.github.io/software/repository/github/tkarwal/procoli", "api_url": "https://rseng.github.io/software/api/repos/github/tkarwal/procoli"}, {"uid": "github/xuanxu/starmatrix", "html_url": "https://rseng.github.io/software/repository/github/xuanxu/starmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/xuanxu/starmatrix"}, {"uid": "github/swiftsim/swiftsimio", "html_url": "https://rseng.github.io/software/repository/github/swiftsim/swiftsimio", "api_url": "https://rseng.github.io/software/api/repos/github/swiftsim/swiftsimio"}, {"uid": "github/GATB/bcalm", "html_url": "https://rseng.github.io/software/repository/github/GATB/bcalm", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/bcalm"}, {"uid": "github/GATB/gatb-core", "html_url": "https://rseng.github.io/software/repository/github/GATB/gatb-core", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/gatb-core"}, {"uid": "github/GATB/MindTheGap", "html_url": "https://rseng.github.io/software/repository/github/GATB/MindTheGap", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/MindTheGap"}, {"uid": "github/GATB/simka", "html_url": "https://rseng.github.io/software/repository/github/GATB/simka", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/simka"}, {"uid": "github/mathjax/MathJax", "html_url": "https://rseng.github.io/software/repository/github/mathjax/MathJax", "api_url": "https://rseng.github.io/software/api/repos/github/mathjax/MathJax"}, {"uid": "github/oneilsh/tidytensor", "html_url": "https://rseng.github.io/software/repository/github/oneilsh/tidytensor", "api_url": "https://rseng.github.io/software/api/repos/github/oneilsh/tidytensor"}, {"uid": "github/PyTables/PyTables", "html_url": "https://rseng.github.io/software/repository/github/PyTables/PyTables", "api_url": "https://rseng.github.io/software/api/repos/github/PyTables/PyTables"}, {"uid": "github/optimusmoose/jsms", "html_url": "https://rseng.github.io/software/repository/github/optimusmoose/jsms", "api_url": "https://rseng.github.io/software/api/repos/github/optimusmoose/jsms"}, {"uid": "github/Griffan/VerifyBamID", "html_url": "https://rseng.github.io/software/repository/github/Griffan/VerifyBamID", "api_url": "https://rseng.github.io/software/api/repos/github/Griffan/VerifyBamID"}, {"uid": "github/Rocsg/FijiRelax", "html_url": "https://rseng.github.io/software/repository/github/Rocsg/FijiRelax", "api_url": "https://rseng.github.io/software/api/repos/github/Rocsg/FijiRelax"}, {"uid": "github/NeamulKabir/EnsembleFam", "html_url": "https://rseng.github.io/software/repository/github/NeamulKabir/EnsembleFam", "api_url": "https://rseng.github.io/software/api/repos/github/NeamulKabir/EnsembleFam"}, {"uid": "github/annehutter/polyspectrum", "html_url": "https://rseng.github.io/software/repository/github/annehutter/polyspectrum", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/polyspectrum"}, {"uid": "github/annehutter/grid-model", "html_url": "https://rseng.github.io/software/repository/github/annehutter/grid-model", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/grid-model"}, {"uid": "github/annehutter/astraeus", "html_url": "https://rseng.github.io/software/repository/github/annehutter/astraeus", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/astraeus"}, {"uid": "github/s-will/LocARNA", "html_url": "https://rseng.github.io/software/repository/github/s-will/LocARNA", "api_url": "https://rseng.github.io/software/api/repos/github/s-will/LocARNA"}, {"uid": "github/seclark/RHT", "html_url": "https://rseng.github.io/software/repository/github/seclark/RHT", "api_url": "https://rseng.github.io/software/api/repos/github/seclark/RHT"}, {"uid": "github/tdaylan/pcat", "html_url": "https://rseng.github.io/software/repository/github/tdaylan/pcat", "api_url": "https://rseng.github.io/software/api/repos/github/tdaylan/pcat"}, {"uid": "github/heatherprince/cosmoped", "html_url": "https://rseng.github.io/software/repository/github/heatherprince/cosmoped", "api_url": "https://rseng.github.io/software/api/repos/github/heatherprince/cosmoped"}, {"uid": "github/TheJacksonLaboratory/SvAnn", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/SvAnn", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/SvAnn"}, {"uid": "github/TheJacksonLaboratory/drug-synergy", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/drug-synergy", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/drug-synergy"}, {"uid": "github/jbrakensiek/CORBITS", "html_url": "https://rseng.github.io/software/repository/github/jbrakensiek/CORBITS", "api_url": "https://rseng.github.io/software/api/repos/github/jbrakensiek/CORBITS"}, {"uid": "github/JuliaHealth/NeuroAnalyzer.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHealth/NeuroAnalyzer.jl"}, {"uid": "github/vprusso/toqito", "html_url": "https://rseng.github.io/software/repository/github/vprusso/toqito", "api_url": "https://rseng.github.io/software/api/repos/github/vprusso/toqito"}, {"uid": "github/savila/halogen", "html_url": "https://rseng.github.io/software/repository/github/savila/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/savila/halogen"}, {"uid": "github/iric-soft/km", "html_url": "https://rseng.github.io/software/repository/github/iric-soft/km", "api_url": "https://rseng.github.io/software/api/repos/github/iric-soft/km"}, {"uid": "github/tanner-trickle/EXCEED-DM", "html_url": "https://rseng.github.io/software/repository/github/tanner-trickle/EXCEED-DM", "api_url": "https://rseng.github.io/software/api/repos/github/tanner-trickle/EXCEED-DM"}, {"uid": "github/eltevo/steps", "html_url": "https://rseng.github.io/software/repository/github/eltevo/steps", "api_url": "https://rseng.github.io/software/api/repos/github/eltevo/steps"}, {"uid": "github/clemson-cal/sailfish", "html_url": "https://rseng.github.io/software/repository/github/clemson-cal/sailfish", "api_url": "https://rseng.github.io/software/api/repos/github/clemson-cal/sailfish"}, {"uid": "github/tekpinar/correlationplus", "html_url": "https://rseng.github.io/software/repository/github/tekpinar/correlationplus", "api_url": "https://rseng.github.io/software/api/repos/github/tekpinar/correlationplus"}, {"uid": "github/mfruzan/HaploMaker", "html_url": "https://rseng.github.io/software/repository/github/mfruzan/HaploMaker", "api_url": "https://rseng.github.io/software/api/repos/github/mfruzan/HaploMaker"}, {"uid": "github/codidact/qpixel", "html_url": "https://rseng.github.io/software/repository/github/codidact/qpixel", "api_url": "https://rseng.github.io/software/api/repos/github/codidact/qpixel"}, {"uid": "github/bempp/bempp-cl", "html_url": "https://rseng.github.io/software/repository/github/bempp/bempp-cl", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/bempp-cl"}, {"uid": "github/bempp/kifmm", "html_url": "https://rseng.github.io/software/repository/github/bempp/kifmm", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/kifmm"}, {"uid": "github/montilab/nf-gwas-pipeline", "html_url": "https://rseng.github.io/software/repository/github/montilab/nf-gwas-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/montilab/nf-gwas-pipeline"}, {"uid": "github/GRIT-RBSim/GRIT", "html_url": "https://rseng.github.io/software/repository/github/GRIT-RBSim/GRIT", "api_url": "https://rseng.github.io/software/api/repos/github/GRIT-RBSim/GRIT"}, {"uid": "github/grd349/PBjam", "html_url": "https://rseng.github.io/software/repository/github/grd349/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/grd349/PBjam"}, {"uid": "github/bayzidlab/SAINT-Angle", "html_url": "https://rseng.github.io/software/repository/github/bayzidlab/SAINT-Angle", "api_url": "https://rseng.github.io/software/api/repos/github/bayzidlab/SAINT-Angle"}, {"uid": "github/DSIMB/medusa", "html_url": "https://rseng.github.io/software/repository/github/DSIMB/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/DSIMB/medusa"}, {"uid": "github/atakan/KeplerSolver", "html_url": "https://rseng.github.io/software/repository/github/atakan/KeplerSolver", "api_url": "https://rseng.github.io/software/api/repos/github/atakan/KeplerSolver"}, {"uid": "github/ACCarnall/SpectRes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/SpectRes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/SpectRes"}, {"uid": "github/ACCarnall/bagpipes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/bagpipes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/bagpipes"}, {"uid": "github/uwssg/APS", "html_url": "https://rseng.github.io/software/repository/github/uwssg/APS", "api_url": "https://rseng.github.io/software/api/repos/github/uwssg/APS"}, {"uid": "github/IndrajeetPatil/statsExpressions", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/statsExpressions", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/statsExpressions"}, {"uid": "github/IndrajeetPatil/ggstatsplot", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/ggstatsplot", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/ggstatsplot"}, {"uid": "github/chenzhaiyu/abspy", "html_url": "https://rseng.github.io/software/repository/github/chenzhaiyu/abspy", "api_url": "https://rseng.github.io/software/api/repos/github/chenzhaiyu/abspy"}, {"uid": "github/genotoul-bioinfo/Binette", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/Binette", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/Binette"}, {"uid": "github/genotoul-bioinfo/dgenies", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/dgenies", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/dgenies"}, {"uid": "github/gwpy/gwpy", "html_url": "https://rseng.github.io/software/repository/github/gwpy/gwpy", "api_url": "https://rseng.github.io/software/api/repos/github/gwpy/gwpy"}, {"uid": "github/ManuelBehrendt/Mera.jl", "html_url": "https://rseng.github.io/software/repository/github/ManuelBehrendt/Mera.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelBehrendt/Mera.jl"}, {"uid": "github/RamanLab/iCOMIC", "html_url": "https://rseng.github.io/software/repository/github/RamanLab/iCOMIC", "api_url": "https://rseng.github.io/software/api/repos/github/RamanLab/iCOMIC"}, {"uid": "github/meganmansfield/IGRINS_transit", "html_url": "https://rseng.github.io/software/repository/github/meganmansfield/IGRINS_transit", "api_url": "https://rseng.github.io/software/api/repos/github/meganmansfield/IGRINS_transit"}, {"uid": "github/emunte/vaRHC", "html_url": "https://rseng.github.io/software/repository/github/emunte/vaRHC", "api_url": "https://rseng.github.io/software/api/repos/github/emunte/vaRHC"}, {"uid": "github/jameschapman19/cca_zoo", "html_url": "https://rseng.github.io/software/repository/github/jameschapman19/cca_zoo", "api_url": "https://rseng.github.io/software/api/repos/github/jameschapman19/cca_zoo"}, {"uid": "github/FunctionalUrology/MLcps", "html_url": "https://rseng.github.io/software/repository/github/FunctionalUrology/MLcps", "api_url": "https://rseng.github.io/software/api/repos/github/FunctionalUrology/MLcps"}, {"uid": "github/CBIIT-CGBB/gcMECM", "html_url": "https://rseng.github.io/software/repository/github/CBIIT-CGBB/gcMECM", "api_url": "https://rseng.github.io/software/api/repos/github/CBIIT-CGBB/gcMECM"}, {"uid": "github/niosh-mining/obsplus", "html_url": "https://rseng.github.io/software/repository/github/niosh-mining/obsplus", "api_url": "https://rseng.github.io/software/api/repos/github/niosh-mining/obsplus"}, {"uid": "github/conda-forge/conda-smithy", "html_url": "https://rseng.github.io/software/repository/github/conda-forge/conda-smithy", "api_url": "https://rseng.github.io/software/api/repos/github/conda-forge/conda-smithy"}, {"uid": "github/iopenshell/ezSpectrum", "html_url": "https://rseng.github.io/software/repository/github/iopenshell/ezSpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/iopenshell/ezSpectrum"}, {"uid": "github/C-Briddon/SELCIE", "html_url": "https://rseng.github.io/software/repository/github/C-Briddon/SELCIE", "api_url": "https://rseng.github.io/software/api/repos/github/C-Briddon/SELCIE"}, {"uid": "github/rzellem/EXOTIC", "html_url": "https://rseng.github.io/software/repository/github/rzellem/EXOTIC", "api_url": "https://rseng.github.io/software/api/repos/github/rzellem/EXOTIC"}, {"uid": "github/drzeeshanahmed/JWES-Visual", "html_url": "https://rseng.github.io/software/repository/github/drzeeshanahmed/JWES-Visual", "api_url": "https://rseng.github.io/software/api/repos/github/drzeeshanahmed/JWES-Visual"}, {"uid": "github/OceanParcels/plasticparcels", "html_url": "https://rseng.github.io/software/repository/github/OceanParcels/plasticparcels", "api_url": "https://rseng.github.io/software/api/repos/github/OceanParcels/plasticparcels"}, {"uid": "github/gmzsebastian/FLEET", "html_url": "https://rseng.github.io/software/repository/github/gmzsebastian/FLEET", "api_url": "https://rseng.github.io/software/api/repos/github/gmzsebastian/FLEET"}, {"uid": "github/LucyMcGowan/tipr", "html_url": "https://rseng.github.io/software/repository/github/LucyMcGowan/tipr", "api_url": "https://rseng.github.io/software/api/repos/github/LucyMcGowan/tipr"}, {"uid": "github/klee/klee", "html_url": "https://rseng.github.io/software/repository/github/klee/klee", "api_url": "https://rseng.github.io/software/api/repos/github/klee/klee"}, {"uid": "github/opencollab/arpack-ng", "html_url": "https://rseng.github.io/software/repository/github/opencollab/arpack-ng", "api_url": "https://rseng.github.io/software/api/repos/github/opencollab/arpack-ng"}, {"uid": "github/Cantera/cantera", "html_url": "https://rseng.github.io/software/repository/github/Cantera/cantera", "api_url": "https://rseng.github.io/software/api/repos/github/Cantera/cantera"}, {"uid": "github/mikessh/vdjtools", "html_url": "https://rseng.github.io/software/repository/github/mikessh/vdjtools", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/vdjtools"}, {"uid": "github/mikessh/oncofuse", "html_url": "https://rseng.github.io/software/repository/github/mikessh/oncofuse", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/oncofuse"}, {"uid": "github/DTsuna/binary_precursor", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/binary_precursor", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/binary_precursor"}, {"uid": "github/DTsuna/CHIPS", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/CHIPS", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/CHIPS"}, {"uid": "github/Shyentist/fish-r-man", "html_url": "https://rseng.github.io/software/repository/github/Shyentist/fish-r-man", "api_url": "https://rseng.github.io/software/api/repos/github/Shyentist/fish-r-man"}, {"uid": "github/emhuff/Balrog", "html_url": "https://rseng.github.io/software/repository/github/emhuff/Balrog", "api_url": "https://rseng.github.io/software/api/repos/github/emhuff/Balrog"}, {"uid": "github/metageni/FOCUS", "html_url": "https://rseng.github.io/software/repository/github/metageni/FOCUS", "api_url": "https://rseng.github.io/software/api/repos/github/metageni/FOCUS"}, {"uid": "github/rhyspoulton/WhereWolf", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/WhereWolf", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/WhereWolf"}, {"uid": "github/rhyspoulton/OrbWeaver", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/OrbWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/OrbWeaver"}, {"uid": "github/exafmm/exafmm-t", "html_url": "https://rseng.github.io/software/repository/github/exafmm/exafmm-t", "api_url": "https://rseng.github.io/software/api/repos/github/exafmm/exafmm-t"}, {"uid": "github/SCECcode/pycsep", "html_url": "https://rseng.github.io/software/repository/github/SCECcode/pycsep", "api_url": "https://rseng.github.io/software/api/repos/github/SCECcode/pycsep"}, {"uid": "github/sonny-harman/snowball", "html_url": "https://rseng.github.io/software/repository/github/sonny-harman/snowball", "api_url": "https://rseng.github.io/software/api/repos/github/sonny-harman/snowball"}, {"uid": "github/Huang-CL/Magrathea", "html_url": "https://rseng.github.io/software/repository/github/Huang-CL/Magrathea", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-CL/Magrathea"}, {"uid": "github/jakobherpich/pyICs", "html_url": "https://rseng.github.io/software/repository/github/jakobherpich/pyICs", "api_url": "https://rseng.github.io/software/api/repos/github/jakobherpich/pyICs"}, {"uid": "github/HajkD/LTRpred", "html_url": "https://rseng.github.io/software/repository/github/HajkD/LTRpred", "api_url": "https://rseng.github.io/software/api/repos/github/HajkD/LTRpred"}, {"uid": "github/jydu/maffilter", "html_url": "https://rseng.github.io/software/repository/github/jydu/maffilter", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/maffilter"}, {"uid": "github/jydu/physamp", "html_url": "https://rseng.github.io/software/repository/github/jydu/physamp", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/physamp"}, {"uid": "github/xinglunju/pyAmor", "html_url": "https://rseng.github.io/software/repository/github/xinglunju/pyAmor", "api_url": "https://rseng.github.io/software/api/repos/github/xinglunju/pyAmor"}, {"uid": "github/sonwell/biotools", "html_url": "https://rseng.github.io/software/repository/github/sonwell/biotools", "api_url": "https://rseng.github.io/software/api/repos/github/sonwell/biotools"}, {"uid": "github/kernsuite-debian/parseltongue", "html_url": "https://rseng.github.io/software/repository/github/kernsuite-debian/parseltongue", "api_url": "https://rseng.github.io/software/api/repos/github/kernsuite-debian/parseltongue"}, {"uid": "github/AgrDataSci/climatrends", "html_url": "https://rseng.github.io/software/repository/github/AgrDataSci/climatrends", "api_url": "https://rseng.github.io/software/api/repos/github/AgrDataSci/climatrends"}, {"uid": "github/H-E-L-P/XID_plus", "html_url": "https://rseng.github.io/software/repository/github/H-E-L-P/XID_plus", "api_url": "https://rseng.github.io/software/api/repos/github/H-E-L-P/XID_plus"}, {"uid": "github/cbottrell/RealSim", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/RealSim", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/RealSim"}, {"uid": "github/cbottrell/realsim_ifs", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/realsim_ifs", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/realsim_ifs"}, {"uid": "github/sneumann/xcms", "html_url": "https://rseng.github.io/software/repository/github/sneumann/xcms", "api_url": "https://rseng.github.io/software/api/repos/github/sneumann/xcms"}, {"uid": "github/hpgem/nanomesh", "html_url": "https://rseng.github.io/software/repository/github/hpgem/nanomesh", "api_url": "https://rseng.github.io/software/api/repos/github/hpgem/nanomesh"}, {"uid": "github/theislab/cellrank", "html_url": "https://rseng.github.io/software/repository/github/theislab/cellrank", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/cellrank"}, {"uid": "github/theislab/scCODA", "html_url": "https://rseng.github.io/software/repository/github/theislab/scCODA", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scCODA"}, {"uid": "github/theislab/scanpy", "html_url": "https://rseng.github.io/software/repository/github/theislab/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scanpy"}, {"uid": "github/theislab/anndata2ri", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata2ri", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata2ri"}, {"uid": "github/theislab/anndata", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata"}, {"uid": "github/theislab/scvelo", "html_url": "https://rseng.github.io/software/repository/github/theislab/scvelo", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scvelo"}, {"uid": "github/atomec-project/atoMEC", "html_url": "https://rseng.github.io/software/repository/github/atomec-project/atoMEC", "api_url": "https://rseng.github.io/software/api/repos/github/atomec-project/atoMEC"}, {"uid": "github/unibe-icelab/thz-image-explorer", "html_url": "https://rseng.github.io/software/repository/github/unibe-icelab/thz-image-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/unibe-icelab/thz-image-explorer"}, {"uid": "github/Hoohm/CITE-seq-Count", "html_url": "https://rseng.github.io/software/repository/github/Hoohm/CITE-seq-Count", "api_url": "https://rseng.github.io/software/api/repos/github/Hoohm/CITE-seq-Count"}, {"uid": "github/Social-Evolution-and-Behavior/anTraX", "html_url": "https://rseng.github.io/software/repository/github/Social-Evolution-and-Behavior/anTraX", "api_url": "https://rseng.github.io/software/api/repos/github/Social-Evolution-and-Behavior/anTraX"}, {"uid": "github/JuBiotech/peak-performance", "html_url": "https://rseng.github.io/software/repository/github/JuBiotech/peak-performance", "api_url": "https://rseng.github.io/software/api/repos/github/JuBiotech/peak-performance"}, {"uid": "github/ronshnapp/MyPTV", "html_url": "https://rseng.github.io/software/repository/github/ronshnapp/MyPTV", "api_url": "https://rseng.github.io/software/api/repos/github/ronshnapp/MyPTV"}, {"uid": "github/aikubo/LinkingLines", "html_url": "https://rseng.github.io/software/repository/github/aikubo/LinkingLines", "api_url": "https://rseng.github.io/software/api/repos/github/aikubo/LinkingLines"}, {"uid": "github/nithyanandan/PRISim", "html_url": "https://rseng.github.io/software/repository/github/nithyanandan/PRISim", "api_url": "https://rseng.github.io/software/api/repos/github/nithyanandan/PRISim"}, {"uid": "github/cau-se/ARCHES-PiCar-X", "html_url": "https://rseng.github.io/software/repository/github/cau-se/ARCHES-PiCar-X", "api_url": "https://rseng.github.io/software/api/repos/github/cau-se/ARCHES-PiCar-X"}, {"uid": "github/hibridon/hibridon", "html_url": "https://rseng.github.io/software/repository/github/hibridon/hibridon", "api_url": "https://rseng.github.io/software/api/repos/github/hibridon/hibridon"}, {"uid": "github/radiosunpy/RadioSunPy", "html_url": "https://rseng.github.io/software/repository/github/radiosunpy/RadioSunPy", "api_url": "https://rseng.github.io/software/api/repos/github/radiosunpy/RadioSunPy"}, {"uid": "github/KerryAM-R/ggVolcanoR", "html_url": "https://rseng.github.io/software/repository/github/KerryAM-R/ggVolcanoR", "api_url": "https://rseng.github.io/software/api/repos/github/KerryAM-R/ggVolcanoR"}, {"uid": "github/moranegg/AffectationRO", "html_url": "https://rseng.github.io/software/repository/github/moranegg/AffectationRO", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/AffectationRO"}, {"uid": "github/moranegg/deposit-template", "html_url": "https://rseng.github.io/software/repository/github/moranegg/deposit-template", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/deposit-template"}, {"uid": "github/antwiser/ChemFH", "html_url": "https://rseng.github.io/software/repository/github/antwiser/ChemFH", "api_url": "https://rseng.github.io/software/api/repos/github/antwiser/ChemFH"}, {"uid": "github/PynPoint/PynPoint", "html_url": "https://rseng.github.io/software/repository/github/PynPoint/PynPoint", "api_url": "https://rseng.github.io/software/api/repos/github/PynPoint/PynPoint"}, {"uid": "github/secimTools/SECIMTools", "html_url": "https://rseng.github.io/software/repository/github/secimTools/SECIMTools", "api_url": "https://rseng.github.io/software/api/repos/github/secimTools/SECIMTools"}, {"uid": "github/comp-phys-marc/qasm-ts", "html_url": "https://rseng.github.io/software/repository/github/comp-phys-marc/qasm-ts", "api_url": "https://rseng.github.io/software/api/repos/github/comp-phys-marc/qasm-ts"}, {"uid": "github/staphopia/staphopia-paper", "html_url": "https://rseng.github.io/software/repository/github/staphopia/staphopia-paper", "api_url": "https://rseng.github.io/software/api/repos/github/staphopia/staphopia-paper"}, {"uid": "github/chklovski/CheckM2", "html_url": "https://rseng.github.io/software/repository/github/chklovski/CheckM2", "api_url": "https://rseng.github.io/software/api/repos/github/chklovski/CheckM2"}, {"uid": "github/sina-cb/Tn-seqExplorer", "html_url": "https://rseng.github.io/software/repository/github/sina-cb/Tn-seqExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/sina-cb/Tn-seqExplorer"}, {"uid": "github/abelson-lab/smMIP-tools", "html_url": "https://rseng.github.io/software/repository/github/abelson-lab/smMIP-tools", "api_url": "https://rseng.github.io/software/api/repos/github/abelson-lab/smMIP-tools"}, {"uid": "github/MarioRomeroC/Mixclask", "html_url": "https://rseng.github.io/software/repository/github/MarioRomeroC/Mixclask", "api_url": "https://rseng.github.io/software/api/repos/github/MarioRomeroC/Mixclask"}, {"uid": "github/amusecode/TRES", "html_url": "https://rseng.github.io/software/repository/github/amusecode/TRES", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/TRES"}, {"uid": "github/amusecode/amuse", "html_url": "https://rseng.github.io/software/repository/github/amusecode/amuse", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/amuse"}, {"uid": "github/palumbom/grass", "html_url": "https://rseng.github.io/software/repository/github/palumbom/grass", "api_url": "https://rseng.github.io/software/api/repos/github/palumbom/grass"}, {"uid": "github/PyTomography/slicer_spect_recon", "html_url": "https://rseng.github.io/software/repository/github/PyTomography/slicer_spect_recon", "api_url": "https://rseng.github.io/software/api/repos/github/PyTomography/slicer_spect_recon"}, {"uid": "github/obertscheiderfhwn/RTMsim", "html_url": "https://rseng.github.io/software/repository/github/obertscheiderfhwn/RTMsim", "api_url": "https://rseng.github.io/software/api/repos/github/obertscheiderfhwn/RTMsim"}, {"uid": "github/csb-toolbox/CSB", "html_url": "https://rseng.github.io/software/repository/github/csb-toolbox/CSB", "api_url": "https://rseng.github.io/software/api/repos/github/csb-toolbox/CSB"}, {"uid": "github/ireis/PRF", "html_url": "https://rseng.github.io/software/repository/github/ireis/PRF", "api_url": "https://rseng.github.io/software/api/repos/github/ireis/PRF"}, {"uid": "github/cassidymwagner/fluidsf", "html_url": "https://rseng.github.io/software/repository/github/cassidymwagner/fluidsf", "api_url": "https://rseng.github.io/software/api/repos/github/cassidymwagner/fluidsf"}, {"uid": "github/afd-illinois/grim", "html_url": "https://rseng.github.io/software/repository/github/afd-illinois/grim", "api_url": "https://rseng.github.io/software/api/repos/github/afd-illinois/grim"}, {"uid": "github/BenitoFar/NestedComBat", "html_url": "https://rseng.github.io/software/repository/github/BenitoFar/NestedComBat", "api_url": "https://rseng.github.io/software/api/repos/github/BenitoFar/NestedComBat"}, {"uid": "github/craddis1/MathWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/MathWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/MathWAP"}, {"uid": "github/craddis1/CosmoWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/CosmoWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/CosmoWAP"}, {"uid": "github/ngltr/sinaps", "html_url": "https://rseng.github.io/software/repository/github/ngltr/sinaps", "api_url": "https://rseng.github.io/software/api/repos/github/ngltr/sinaps"}, {"uid": "github/genialis/RNAnorm", "html_url": "https://rseng.github.io/software/repository/github/genialis/RNAnorm", "api_url": "https://rseng.github.io/software/api/repos/github/genialis/RNAnorm"}, {"uid": "github/margudo/LSSGALPY", "html_url": "https://rseng.github.io/software/repository/github/margudo/LSSGALPY", "api_url": "https://rseng.github.io/software/api/repos/github/margudo/LSSGALPY"}, {"uid": "github/vsoch/gridtest", "html_url": "https://rseng.github.io/software/repository/github/vsoch/gridtest", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/gridtest"}, {"uid": "github/vsoch/citelang", "html_url": "https://rseng.github.io/software/repository/github/vsoch/citelang", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/citelang"}, {"uid": "github/NumericalMathematics/PositiveIntegrators.jl", "html_url": "https://rseng.github.io/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/NumericalMathematics/PositiveIntegrators.jl"}, {"uid": "github/cmgcds/fastvpinns", "html_url": "https://rseng.github.io/software/repository/github/cmgcds/fastvpinns", "api_url": "https://rseng.github.io/software/api/repos/github/cmgcds/fastvpinns"}, {"uid": "github/Astroua/SCIMES", "html_url": "https://rseng.github.io/software/repository/github/Astroua/SCIMES", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/SCIMES"}, {"uid": "github/Astroua/TurbuStat", "html_url": "https://rseng.github.io/software/repository/github/Astroua/TurbuStat", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/TurbuStat"}, {"uid": "github/numba/numba", "html_url": "https://rseng.github.io/software/repository/github/numba/numba", "api_url": "https://rseng.github.io/software/api/repos/github/numba/numba"}, {"uid": "github/sapearson/HSS", "html_url": "https://rseng.github.io/software/repository/github/sapearson/HSS", "api_url": "https://rseng.github.io/software/api/repos/github/sapearson/HSS"}, {"uid": "github/ewanbarr/peasoup", "html_url": "https://rseng.github.io/software/repository/github/ewanbarr/peasoup", "api_url": "https://rseng.github.io/software/api/repos/github/ewanbarr/peasoup"}, {"uid": "github/jepegit/cellpy", "html_url": "https://rseng.github.io/software/repository/github/jepegit/cellpy", "api_url": "https://rseng.github.io/software/api/repos/github/jepegit/cellpy"}, {"uid": "github/yangyongsan-bio/GREAP", "html_url": "https://rseng.github.io/software/repository/github/yangyongsan-bio/GREAP", "api_url": "https://rseng.github.io/software/api/repos/github/yangyongsan-bio/GREAP"}, {"uid": "github/maxmahlke/ssos", "html_url": "https://rseng.github.io/software/repository/github/maxmahlke/ssos", "api_url": "https://rseng.github.io/software/api/repos/github/maxmahlke/ssos"}, {"uid": "github/Ayuei/DeBEIR", "html_url": "https://rseng.github.io/software/repository/github/Ayuei/DeBEIR", "api_url": "https://rseng.github.io/software/api/repos/github/Ayuei/DeBEIR"}, {"uid": "github/JDabringhausen/BiPoS1", "html_url": "https://rseng.github.io/software/repository/github/JDabringhausen/BiPoS1", "api_url": "https://rseng.github.io/software/api/repos/github/JDabringhausen/BiPoS1"}, {"uid": "github/piernik-dev/piernik", "html_url": "https://rseng.github.io/software/repository/github/piernik-dev/piernik", "api_url": "https://rseng.github.io/software/api/repos/github/piernik-dev/piernik"}, {"uid": "github/parafields/parafields", "html_url": "https://rseng.github.io/software/repository/github/parafields/parafields", "api_url": "https://rseng.github.io/software/api/repos/github/parafields/parafields"}, {"uid": "github/andrewmoore73/SourceDetect", "html_url": "https://rseng.github.io/software/repository/github/andrewmoore73/SourceDetect", "api_url": "https://rseng.github.io/software/api/repos/github/andrewmoore73/SourceDetect"}, {"uid": "github/jdonnert/WVTICs", "html_url": "https://rseng.github.io/software/repository/github/jdonnert/WVTICs", "api_url": "https://rseng.github.io/software/api/repos/github/jdonnert/WVTICs"}, {"uid": "github/mmollina/viewpoly", "html_url": "https://rseng.github.io/software/repository/github/mmollina/viewpoly", "api_url": "https://rseng.github.io/software/api/repos/github/mmollina/viewpoly"}, {"uid": "github/gerddie/maxflow", "html_url": "https://rseng.github.io/software/repository/github/gerddie/maxflow", "api_url": "https://rseng.github.io/software/api/repos/github/gerddie/maxflow"}, {"uid": "github/dstndstn/tractor", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/tractor", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/tractor"}, {"uid": "github/dstndstn/astrometry.net", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/astrometry.net", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/astrometry.net"}, {"uid": "github/bwoshea/ZEUS-MP_2", "html_url": "https://rseng.github.io/software/repository/github/bwoshea/ZEUS-MP_2", "api_url": "https://rseng.github.io/software/api/repos/github/bwoshea/ZEUS-MP_2"}, {"uid": "github/Jonathanfreundlich/CuspCore", "html_url": "https://rseng.github.io/software/repository/github/Jonathanfreundlich/CuspCore", "api_url": "https://rseng.github.io/software/api/repos/github/Jonathanfreundlich/CuspCore"}, {"uid": "github/dgrin1/axionCAMB", "html_url": "https://rseng.github.io/software/repository/github/dgrin1/axionCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/dgrin1/axionCAMB"}, {"uid": "github/biaslab/RxInfer.jl", "html_url": "https://rseng.github.io/software/repository/github/biaslab/RxInfer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/biaslab/RxInfer.jl"}, {"uid": "github/SihaoCheng/WD_models", "html_url": "https://rseng.github.io/software/repository/github/SihaoCheng/WD_models", "api_url": "https://rseng.github.io/software/api/repos/github/SihaoCheng/WD_models"}, {"uid": "github/DessimozLab/omamer", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/omamer", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/omamer"}, {"uid": "github/DessimozLab/read2tree", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/read2tree", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/read2tree"}, {"uid": "github/tcassanelli/pywpf", "html_url": "https://rseng.github.io/software/repository/github/tcassanelli/pywpf", "api_url": "https://rseng.github.io/software/api/repos/github/tcassanelli/pywpf"}, {"uid": "github/neuralhydrology/neuralhydrology", "html_url": "https://rseng.github.io/software/repository/github/neuralhydrology/neuralhydrology", "api_url": "https://rseng.github.io/software/api/repos/github/neuralhydrology/neuralhydrology"}, {"uid": "github/nekokoe/Plasmer", "html_url": "https://rseng.github.io/software/repository/github/nekokoe/Plasmer", "api_url": "https://rseng.github.io/software/api/repos/github/nekokoe/Plasmer"}, {"uid": "github/JLSteenwyk/ggpubfigs", "html_url": "https://rseng.github.io/software/repository/github/JLSteenwyk/ggpubfigs", "api_url": "https://rseng.github.io/software/api/repos/github/JLSteenwyk/ggpubfigs"}, {"uid": "github/amromics/panta", "html_url": "https://rseng.github.io/software/repository/github/amromics/panta", "api_url": "https://rseng.github.io/software/api/repos/github/amromics/panta"}, {"uid": "github/PMBio/peer", "html_url": "https://rseng.github.io/software/repository/github/PMBio/peer", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/peer"}, {"uid": "github/PMBio/spatialde2-paper", "html_url": "https://rseng.github.io/software/repository/github/PMBio/spatialde2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/spatialde2-paper"}, {"uid": "github/mmahmoudian/sivs", "html_url": "https://rseng.github.io/software/repository/github/mmahmoudian/sivs", "api_url": "https://rseng.github.io/software/api/repos/github/mmahmoudian/sivs"}, {"uid": "github/EbmeyerSt/GEnView", "html_url": "https://rseng.github.io/software/repository/github/EbmeyerSt/GEnView", "api_url": "https://rseng.github.io/software/api/repos/github/EbmeyerSt/GEnView"}, {"uid": "github/entangled/entangled", "html_url": "https://rseng.github.io/software/repository/github/entangled/entangled", "api_url": "https://rseng.github.io/software/api/repos/github/entangled/entangled"}, {"uid": "github/otvam/pypeec", "html_url": "https://rseng.github.io/software/repository/github/otvam/pypeec", "api_url": "https://rseng.github.io/software/api/repos/github/otvam/pypeec"}, {"uid": "github/tkonolige/city2ba", "html_url": "https://rseng.github.io/software/repository/github/tkonolige/city2ba", "api_url": "https://rseng.github.io/software/api/repos/github/tkonolige/city2ba"}, {"uid": "github/BobAubouin/Python_Anesthesia_Simulator", "html_url": "https://rseng.github.io/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/BobAubouin/Python_Anesthesia_Simulator"}, {"uid": "github/utrillalab/repromin", "html_url": "https://rseng.github.io/software/repository/github/utrillalab/repromin", "api_url": "https://rseng.github.io/software/api/repos/github/utrillalab/repromin"}, {"uid": "github/cblearn/cblearn", "html_url": "https://rseng.github.io/software/repository/github/cblearn/cblearn", "api_url": "https://rseng.github.io/software/api/repos/github/cblearn/cblearn"}, {"uid": "github/karpov-sv/stdweb", "html_url": "https://rseng.github.io/software/repository/github/karpov-sv/stdweb", "api_url": "https://rseng.github.io/software/api/repos/github/karpov-sv/stdweb"}, {"uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "html_url": "https://rseng.github.io/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "api_url": "https://rseng.github.io/software/api/repos/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark"}, {"uid": "github/GeminiDRSoftware/DRAGONS", "html_url": "https://rseng.github.io/software/repository/github/GeminiDRSoftware/DRAGONS", "api_url": "https://rseng.github.io/software/api/repos/github/GeminiDRSoftware/DRAGONS"}, {"uid": "github/seqcode/allo", "html_url": "https://rseng.github.io/software/repository/github/seqcode/allo", "api_url": "https://rseng.github.io/software/api/repos/github/seqcode/allo"}, {"uid": "github/MrShoenel/metrics-as-scores", "html_url": "https://rseng.github.io/software/repository/github/MrShoenel/metrics-as-scores", "api_url": "https://rseng.github.io/software/api/repos/github/MrShoenel/metrics-as-scores"}, {"uid": "github/tidyverse/glue", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/glue", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/glue"}, {"uid": "github/tidyverse/ggplot2", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/ggplot2", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/ggplot2"}, {"uid": "github/learningsimulator/learningsimulator", "html_url": "https://rseng.github.io/software/repository/github/learningsimulator/learningsimulator", "api_url": "https://rseng.github.io/software/api/repos/github/learningsimulator/learningsimulator"}, {"uid": "github/GalSim-developers/GalSim", "html_url": "https://rseng.github.io/software/repository/github/GalSim-developers/GalSim", "api_url": "https://rseng.github.io/software/api/repos/github/GalSim-developers/GalSim"}, {"uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "html_url": "https://rseng.github.io/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "api_url": "https://rseng.github.io/software/api/repos/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework"}, {"uid": "github/prmunday/Immunolyser", "html_url": "https://rseng.github.io/software/repository/github/prmunday/Immunolyser", "api_url": "https://rseng.github.io/software/api/repos/github/prmunday/Immunolyser"}, {"uid": "github/Astro-Sean/autophot", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/autophot", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/autophot"}, {"uid": "github/Astro-Sean/escatter", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/escatter", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/escatter"}, {"uid": "github/LMBooth/pybci", "html_url": "https://rseng.github.io/software/repository/github/LMBooth/pybci", "api_url": "https://rseng.github.io/software/api/repos/github/LMBooth/pybci"}, {"uid": "github/catherinezucker/radfil", "html_url": "https://rseng.github.io/software/repository/github/catherinezucker/radfil", "api_url": "https://rseng.github.io/software/api/repos/github/catherinezucker/radfil"}, {"uid": "github/XuhanLiu/DrugEx", "html_url": "https://rseng.github.io/software/repository/github/XuhanLiu/DrugEx", "api_url": "https://rseng.github.io/software/api/repos/github/XuhanLiu/DrugEx"}, {"uid": "github/Nadi-System/nadi-system", "html_url": "https://rseng.github.io/software/repository/github/Nadi-System/nadi-system", "api_url": "https://rseng.github.io/software/api/repos/github/Nadi-System/nadi-system"}, {"uid": "github/open2c/polychrom", "html_url": "https://rseng.github.io/software/repository/github/open2c/polychrom", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/polychrom"}, {"uid": "github/open2c/pairtools", "html_url": "https://rseng.github.io/software/repository/github/open2c/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/pairtools"}, {"uid": "github/roualdes/bridgestan", "html_url": "https://rseng.github.io/software/repository/github/roualdes/bridgestan", "api_url": "https://rseng.github.io/software/api/repos/github/roualdes/bridgestan"}, {"uid": "github/sosl/H-FISTA", "html_url": "https://rseng.github.io/software/repository/github/sosl/H-FISTA", "api_url": "https://rseng.github.io/software/api/repos/github/sosl/H-FISTA"}, {"uid": "github/choosehappy/HoverFast", "html_url": "https://rseng.github.io/software/repository/github/choosehappy/HoverFast", "api_url": "https://rseng.github.io/software/api/repos/github/choosehappy/HoverFast"}, {"uid": "github/richford/groupyr", "html_url": "https://rseng.github.io/software/repository/github/richford/groupyr", "api_url": "https://rseng.github.io/software/api/repos/github/richford/groupyr"}, {"uid": "github/espnet/espnet", "html_url": "https://rseng.github.io/software/repository/github/espnet/espnet", "api_url": "https://rseng.github.io/software/api/repos/github/espnet/espnet"}, {"uid": "github/astromb/PICsar2D", "html_url": "https://rseng.github.io/software/repository/github/astromb/PICsar2D", "api_url": "https://rseng.github.io/software/api/repos/github/astromb/PICsar2D"}, {"uid": "github/EliabCanul/nauyaca", "html_url": "https://rseng.github.io/software/repository/github/EliabCanul/nauyaca", "api_url": "https://rseng.github.io/software/api/repos/github/EliabCanul/nauyaca"}, {"uid": "github/UM-Bridge/umbridge", "html_url": "https://rseng.github.io/software/repository/github/UM-Bridge/umbridge", "api_url": "https://rseng.github.io/software/api/repos/github/UM-Bridge/umbridge"}, {"uid": "github/simonbesnard1/gedidb", "html_url": "https://rseng.github.io/software/repository/github/simonbesnard1/gedidb", "api_url": "https://rseng.github.io/software/api/repos/github/simonbesnard1/gedidb"}, {"uid": "github/wdpozzo/raynest", "html_url": "https://rseng.github.io/software/repository/github/wdpozzo/raynest", "api_url": "https://rseng.github.io/software/api/repos/github/wdpozzo/raynest"}, {"uid": "github/lutteropp/NetRAX", "html_url": "https://rseng.github.io/software/repository/github/lutteropp/NetRAX", "api_url": "https://rseng.github.io/software/api/repos/github/lutteropp/NetRAX"}, {"uid": "github/quadram-institute-bioscience/dadaist2", "html_url": "https://rseng.github.io/software/repository/github/quadram-institute-bioscience/dadaist2", "api_url": "https://rseng.github.io/software/api/repos/github/quadram-institute-bioscience/dadaist2"}, {"uid": "github/haoharryfeng/NeuCA", "html_url": "https://rseng.github.io/software/repository/github/haoharryfeng/NeuCA", "api_url": "https://rseng.github.io/software/api/repos/github/haoharryfeng/NeuCA"}, {"uid": "github/nbisweden/MrBayes", "html_url": "https://rseng.github.io/software/repository/github/nbisweden/MrBayes", "api_url": "https://rseng.github.io/software/api/repos/github/nbisweden/MrBayes"}, {"uid": "github/sashakolpakov/dire-jax", "html_url": "https://rseng.github.io/software/repository/github/sashakolpakov/dire-jax", "api_url": "https://rseng.github.io/software/api/repos/github/sashakolpakov/dire-jax"}, {"uid": "github/mjrfringes/haystacks", "html_url": "https://rseng.github.io/software/repository/github/mjrfringes/haystacks", "api_url": "https://rseng.github.io/software/api/repos/github/mjrfringes/haystacks"}, {"uid": "github/bbfrederick/stabilitycalc", "html_url": "https://rseng.github.io/software/repository/github/bbfrederick/stabilitycalc", "api_url": "https://rseng.github.io/software/api/repos/github/bbfrederick/stabilitycalc"}, {"uid": "github/semaphoreP/whereistheplanet", "html_url": "https://rseng.github.io/software/repository/github/semaphoreP/whereistheplanet", "api_url": "https://rseng.github.io/software/api/repos/github/semaphoreP/whereistheplanet"}, {"uid": "github/jamesrhester/Lerche.jl", "html_url": "https://rseng.github.io/software/repository/github/jamesrhester/Lerche.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jamesrhester/Lerche.jl"}, {"uid": "github/matteobreschi/bajes", "html_url": "https://rseng.github.io/software/repository/github/matteobreschi/bajes", "api_url": "https://rseng.github.io/software/api/repos/github/matteobreschi/bajes"}, {"uid": "github/rmjarvis/Piff", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/Piff", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/Piff"}, {"uid": "github/rmjarvis/TreeCorr", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/TreeCorr", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/TreeCorr"}, {"uid": "github/sieunhanbom04/support-exploration-matrix-factorization", "html_url": "https://rseng.github.io/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", "api_url": "https://rseng.github.io/software/api/repos/github/sieunhanbom04/support-exploration-matrix-factorization"}, {"uid": "github/thomgrand/fim-python", "html_url": "https://rseng.github.io/software/repository/github/thomgrand/fim-python", "api_url": "https://rseng.github.io/software/api/repos/github/thomgrand/fim-python"}, {"uid": "github/jgagneastro/CoMover", "html_url": "https://rseng.github.io/software/repository/github/jgagneastro/CoMover", "api_url": "https://rseng.github.io/software/api/repos/github/jgagneastro/CoMover"}, {"uid": "github/manzt/anywidget", "html_url": "https://rseng.github.io/software/repository/github/manzt/anywidget", "api_url": "https://rseng.github.io/software/api/repos/github/manzt/anywidget"}, {"uid": "github/LTeinturier/Cloud-Killer-", "html_url": "https://rseng.github.io/software/repository/github/LTeinturier/Cloud-Killer-", "api_url": "https://rseng.github.io/software/api/repos/github/LTeinturier/Cloud-Killer-"}, {"uid": "github/matthias-mayr/Cartesian-Impedance-Controller", "html_url": "https://rseng.github.io/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", "api_url": "https://rseng.github.io/software/api/repos/github/matthias-mayr/Cartesian-Impedance-Controller"}, {"uid": "github/TRIQS/solid_dmft", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/solid_dmft", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/solid_dmft"}, {"uid": "github/TRIQS/ctseg", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/ctseg", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/ctseg"}, {"uid": "github/ishinder/EASTR", "html_url": "https://rseng.github.io/software/repository/github/ishinder/EASTR", "api_url": "https://rseng.github.io/software/api/repos/github/ishinder/EASTR"}, {"uid": "github/herjy/SLIT", "html_url": "https://rseng.github.io/software/repository/github/herjy/SLIT", "api_url": "https://rseng.github.io/software/api/repos/github/herjy/SLIT"}, {"uid": "github/keurfonluu/toughio", "html_url": "https://rseng.github.io/software/repository/github/keurfonluu/toughio", "api_url": "https://rseng.github.io/software/api/repos/github/keurfonluu/toughio"}, {"uid": "github/OrchardLANL/DPFEHM.jl", "html_url": "https://rseng.github.io/software/repository/github/OrchardLANL/DPFEHM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OrchardLANL/DPFEHM.jl"}, {"uid": "github/OpenMD/OpenMD", "html_url": "https://rseng.github.io/software/repository/github/OpenMD/OpenMD", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMD/OpenMD"}, {"uid": "github/loneknightpy/idba", "html_url": "https://rseng.github.io/software/repository/github/loneknightpy/idba", "api_url": "https://rseng.github.io/software/api/repos/github/loneknightpy/idba"}, {"uid": "github/kadyb/rgugik", "html_url": "https://rseng.github.io/software/repository/github/kadyb/rgugik", "api_url": "https://rseng.github.io/software/api/repos/github/kadyb/rgugik"}, {"uid": "github/jjmccollum/teiphy", "html_url": "https://rseng.github.io/software/repository/github/jjmccollum/teiphy", "api_url": "https://rseng.github.io/software/api/repos/github/jjmccollum/teiphy"}, {"uid": "github/fluhus/blini", "html_url": "https://rseng.github.io/software/repository/github/fluhus/blini", "api_url": "https://rseng.github.io/software/api/repos/github/fluhus/blini"}, {"uid": "github/olivecha/guitarsounds", "html_url": "https://rseng.github.io/software/repository/github/olivecha/guitarsounds", "api_url": "https://rseng.github.io/software/api/repos/github/olivecha/guitarsounds"}, {"uid": "github/n-claes/legolas", "html_url": "https://rseng.github.io/software/repository/github/n-claes/legolas", "api_url": "https://rseng.github.io/software/api/repos/github/n-claes/legolas"}, {"uid": "github/masadcv/FastGeodis", "html_url": "https://rseng.github.io/software/repository/github/masadcv/FastGeodis", "api_url": "https://rseng.github.io/software/api/repos/github/masadcv/FastGeodis"}, {"uid": "github/BenWibking/quokka", "html_url": "https://rseng.github.io/software/repository/github/BenWibking/quokka", "api_url": "https://rseng.github.io/software/api/repos/github/BenWibking/quokka"}, {"uid": "github/jdidion/atropos", "html_url": "https://rseng.github.io/software/repository/github/jdidion/atropos", "api_url": "https://rseng.github.io/software/api/repos/github/jdidion/atropos"}, {"uid": "github/CodeEagle22/SIRITVIS", "html_url": "https://rseng.github.io/software/repository/github/CodeEagle22/SIRITVIS", "api_url": "https://rseng.github.io/software/api/repos/github/CodeEagle22/SIRITVIS"}, {"uid": "github/kostergroup/SIMsalabim", "html_url": "https://rseng.github.io/software/repository/github/kostergroup/SIMsalabim", "api_url": "https://rseng.github.io/software/api/repos/github/kostergroup/SIMsalabim"}, {"uid": "github/ahcm/ffindex", "html_url": "https://rseng.github.io/software/repository/github/ahcm/ffindex", "api_url": "https://rseng.github.io/software/api/repos/github/ahcm/ffindex"}, {"uid": "github/ClaudioZandonella/PRDA", "html_url": "https://rseng.github.io/software/repository/github/ClaudioZandonella/PRDA", "api_url": "https://rseng.github.io/software/api/repos/github/ClaudioZandonella/PRDA"}, {"uid": "github/cb-ge/ephor_wp4_agnostic_models", "html_url": "https://rseng.github.io/software/repository/github/cb-ge/ephor_wp4_agnostic_models", "api_url": "https://rseng.github.io/software/api/repos/github/cb-ge/ephor_wp4_agnostic_models"}, {"uid": "github/nlppln/nlppln", "html_url": "https://rseng.github.io/software/repository/github/nlppln/nlppln", "api_url": "https://rseng.github.io/software/api/repos/github/nlppln/nlppln"}, {"uid": "github/mwhosek/extlaw_H18", "html_url": "https://rseng.github.io/software/repository/github/mwhosek/extlaw_H18", "api_url": "https://rseng.github.io/software/api/repos/github/mwhosek/extlaw_H18"}, {"uid": "github/biomedia-mira/deepscm", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/deepscm", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/deepscm"}, {"uid": "github/biomedia-mira/masf", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/masf", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/masf"}, {"uid": "github/biomedia-mira/drop2", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/drop2", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/drop2"}, {"uid": "github/biomedia-mira/blast-ct", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/blast-ct", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/blast-ct"}, {"uid": "github/biomedia-mira/istn", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/istn", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/istn"}, {"uid": "github/holmescao/ANTS_marking_and_analysis_tools", "html_url": "https://rseng.github.io/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", "api_url": "https://rseng.github.io/software/api/repos/github/holmescao/ANTS_marking_and_analysis_tools"}, {"uid": "github/IPIS-XieLei/CNTSeg", "html_url": "https://rseng.github.io/software/repository/github/IPIS-XieLei/CNTSeg", "api_url": "https://rseng.github.io/software/api/repos/github/IPIS-XieLei/CNTSeg"}, {"uid": "github/KskAdch/TopologicalNumbers.jl", "html_url": "https://rseng.github.io/software/repository/github/KskAdch/TopologicalNumbers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/KskAdch/TopologicalNumbers.jl"}, {"uid": "github/jdiasn/lidarSuit", "html_url": "https://rseng.github.io/software/repository/github/jdiasn/lidarSuit", "api_url": "https://rseng.github.io/software/api/repos/github/jdiasn/lidarSuit"}, {"uid": "github/DistrictDataLabs/yellowbrick", "html_url": "https://rseng.github.io/software/repository/github/DistrictDataLabs/yellowbrick", "api_url": "https://rseng.github.io/software/api/repos/github/DistrictDataLabs/yellowbrick"}, {"uid": "github/jluastro/PopSyCLE", "html_url": "https://rseng.github.io/software/repository/github/jluastro/PopSyCLE", "api_url": "https://rseng.github.io/software/api/repos/github/jluastro/PopSyCLE"}, {"uid": "github/jonas-fuchs/varVAMP", "html_url": "https://rseng.github.io/software/repository/github/jonas-fuchs/varVAMP", "api_url": "https://rseng.github.io/software/api/repos/github/jonas-fuchs/varVAMP"}, {"uid": "github/ABard0/MDGF-MCEC", "html_url": "https://rseng.github.io/software/repository/github/ABard0/MDGF-MCEC", "api_url": "https://rseng.github.io/software/api/repos/github/ABard0/MDGF-MCEC"}, {"uid": "github/desihub/fastspecfit", "html_url": "https://rseng.github.io/software/repository/github/desihub/fastspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/fastspecfit"}, {"uid": "github/desihub/desitarget", "html_url": "https://rseng.github.io/software/repository/github/desihub/desitarget", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/desitarget"}, {"uid": "github/bioAI-Oslo/Spikeometric", "html_url": "https://rseng.github.io/software/repository/github/bioAI-Oslo/Spikeometric", "api_url": "https://rseng.github.io/software/api/repos/github/bioAI-Oslo/Spikeometric"}, {"uid": "github/data4goodlab/wgand", "html_url": "https://rseng.github.io/software/repository/github/data4goodlab/wgand", "api_url": "https://rseng.github.io/software/api/repos/github/data4goodlab/wgand"}, {"uid": "github/zizroc/villager", "html_url": "https://rseng.github.io/software/repository/github/zizroc/villager", "api_url": "https://rseng.github.io/software/api/repos/github/zizroc/villager"}, {"uid": "github/DenaJGibbon/gibbonNetR", "html_url": "https://rseng.github.io/software/repository/github/DenaJGibbon/gibbonNetR", "api_url": "https://rseng.github.io/software/api/repos/github/DenaJGibbon/gibbonNetR"}, {"uid": "github/khyox/recentrifuge", "html_url": "https://rseng.github.io/software/repository/github/khyox/recentrifuge", "api_url": "https://rseng.github.io/software/api/repos/github/khyox/recentrifuge"}, {"uid": "github/isakro/shoredate", "html_url": "https://rseng.github.io/software/repository/github/isakro/shoredate", "api_url": "https://rseng.github.io/software/api/repos/github/isakro/shoredate"}, {"uid": "github/travisseymour/EPICpy", "html_url": "https://rseng.github.io/software/repository/github/travisseymour/EPICpy", "api_url": "https://rseng.github.io/software/api/repos/github/travisseymour/EPICpy"}, {"uid": "github/aadya940/chainopy", "html_url": "https://rseng.github.io/software/repository/github/aadya940/chainopy", "api_url": "https://rseng.github.io/software/api/repos/github/aadya940/chainopy"}, {"uid": "github/RealTimeGenomics/rtg-tools", "html_url": "https://rseng.github.io/software/repository/github/RealTimeGenomics/rtg-tools", "api_url": "https://rseng.github.io/software/api/repos/github/RealTimeGenomics/rtg-tools"}, {"uid": "github/zooniverse/starpy", "html_url": "https://rseng.github.io/software/repository/github/zooniverse/starpy", "api_url": "https://rseng.github.io/software/api/repos/github/zooniverse/starpy"}, {"uid": "github/Teichlab/bin2cell", "html_url": "https://rseng.github.io/software/repository/github/Teichlab/bin2cell", "api_url": "https://rseng.github.io/software/api/repos/github/Teichlab/bin2cell"}, {"uid": "github/MeasureTransport/MParT", "html_url": "https://rseng.github.io/software/repository/github/MeasureTransport/MParT", "api_url": "https://rseng.github.io/software/api/repos/github/MeasureTransport/MParT"}, {"uid": "github/siriobelli/flame", "html_url": "https://rseng.github.io/software/repository/github/siriobelli/flame", "api_url": "https://rseng.github.io/software/api/repos/github/siriobelli/flame"}, {"uid": "github/FrancesBW/bellamy", "html_url": "https://rseng.github.io/software/repository/github/FrancesBW/bellamy", "api_url": "https://rseng.github.io/software/api/repos/github/FrancesBW/bellamy"}, {"uid": "github/antoinemarchal/ROHSA", "html_url": "https://rseng.github.io/software/repository/github/antoinemarchal/ROHSA", "api_url": "https://rseng.github.io/software/api/repos/github/antoinemarchal/ROHSA"}, {"uid": "github/diCenzo-GC/Tn-Core-webserver", "html_url": "https://rseng.github.io/software/repository/github/diCenzo-GC/Tn-Core-webserver", "api_url": "https://rseng.github.io/software/api/repos/github/diCenzo-GC/Tn-Core-webserver"}, {"uid": "github/OpenDA-Association/OpenDA", "html_url": "https://rseng.github.io/software/repository/github/OpenDA-Association/OpenDA", "api_url": "https://rseng.github.io/software/api/repos/github/OpenDA-Association/OpenDA"}, {"uid": "github/Fermipy/fermipy", "html_url": "https://rseng.github.io/software/repository/github/Fermipy/fermipy", "api_url": "https://rseng.github.io/software/api/repos/github/Fermipy/fermipy"}, {"uid": "github/jacobblum/simDRIFT", "html_url": "https://rseng.github.io/software/repository/github/jacobblum/simDRIFT", "api_url": "https://rseng.github.io/software/api/repos/github/jacobblum/simDRIFT"}, {"uid": "github/SAMI-Galaxy-Survey/sami", "html_url": "https://rseng.github.io/software/repository/github/SAMI-Galaxy-Survey/sami", "api_url": "https://rseng.github.io/software/api/repos/github/SAMI-Galaxy-Survey/sami"}, {"uid": "github/marberts/piar", "html_url": "https://rseng.github.io/software/repository/github/marberts/piar", "api_url": "https://rseng.github.io/software/api/repos/github/marberts/piar"}, {"uid": "github/agombolay/ribose-map", "html_url": "https://rseng.github.io/software/repository/github/agombolay/ribose-map", "api_url": "https://rseng.github.io/software/api/repos/github/agombolay/ribose-map"}, {"uid": "github/michauhl/RBPBench", "html_url": "https://rseng.github.io/software/repository/github/michauhl/RBPBench", "api_url": "https://rseng.github.io/software/api/repos/github/michauhl/RBPBench"}, {"uid": "github/mathworks/Simscape-Medical-Ventilator", "html_url": "https://rseng.github.io/software/repository/github/mathworks/Simscape-Medical-Ventilator", "api_url": "https://rseng.github.io/software/api/repos/github/mathworks/Simscape-Medical-Ventilator"}, {"uid": "github/B-UMMI/chewBBACA", "html_url": "https://rseng.github.io/software/repository/github/B-UMMI/chewBBACA", "api_url": "https://rseng.github.io/software/api/repos/github/B-UMMI/chewBBACA"}, {"uid": "github/euroargodev/argopy", "html_url": "https://rseng.github.io/software/repository/github/euroargodev/argopy", "api_url": "https://rseng.github.io/software/api/repos/github/euroargodev/argopy"}, {"uid": "github/eWaterCycle/Cesium-NcWMS", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/Cesium-NcWMS", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/Cesium-NcWMS"}, {"uid": "github/eWaterCycle/eWaterleaf", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/eWaterleaf", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/eWaterleaf"}, {"uid": "github/eWaterCycle/grpc4bmi", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/grpc4bmi", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/grpc4bmi"}, {"uid": "github/eWaterCycle/setup-grpc", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-grpc"}, {"uid": "github/eWaterCycle/ewatercycle", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/ewatercycle", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/ewatercycle"}, {"uid": "github/eWaterCycle/setup-singularity", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-singularity", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-singularity"}, {"uid": "github/eWaterCycle/jupyterlab_thredds", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/jupyterlab_thredds", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/jupyterlab_thredds"}, {"uid": "github/eWaterCycle/experiment-launcher", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/experiment-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/experiment-launcher"}, {"uid": "github/MJTemple/qsogen", "html_url": "https://rseng.github.io/software/repository/github/MJTemple/qsogen", "api_url": "https://rseng.github.io/software/api/repos/github/MJTemple/qsogen"}, {"uid": "github/mariuzka/pop2net", "html_url": "https://rseng.github.io/software/repository/github/mariuzka/pop2net", "api_url": "https://rseng.github.io/software/api/repos/github/mariuzka/pop2net"}, {"uid": "github/enveda/RPath", "html_url": "https://rseng.github.io/software/repository/github/enveda/RPath", "api_url": "https://rseng.github.io/software/api/repos/github/enveda/RPath"}, {"uid": "github/gpantel/MolPainter", "html_url": "https://rseng.github.io/software/repository/github/gpantel/MolPainter", "api_url": "https://rseng.github.io/software/api/repos/github/gpantel/MolPainter"}, {"uid": "github/dgerosa/spops", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/spops", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/spops"}, {"uid": "github/dgerosa/gwdet", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/gwdet", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/gwdet"}, {"uid": "github/dgerosa/surrkick", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/surrkick", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/surrkick"}, {"uid": "github/MikkelSchubert/adapterremoval", "html_url": "https://rseng.github.io/software/repository/github/MikkelSchubert/adapterremoval", "api_url": "https://rseng.github.io/software/api/repos/github/MikkelSchubert/adapterremoval"}, {"uid": "github/PengyiZhang/DRR4Covid", "html_url": "https://rseng.github.io/software/repository/github/PengyiZhang/DRR4Covid", "api_url": "https://rseng.github.io/software/api/repos/github/PengyiZhang/DRR4Covid"}, {"uid": "github/thieu1995/permetrics", "html_url": "https://rseng.github.io/software/repository/github/thieu1995/permetrics", "api_url": "https://rseng.github.io/software/api/repos/github/thieu1995/permetrics"}, {"uid": "github/barricklab/seabreeze", "html_url": "https://rseng.github.io/software/repository/github/barricklab/seabreeze", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/seabreeze"}, {"uid": "github/barricklab/pLannotate", "html_url": "https://rseng.github.io/software/repository/github/barricklab/pLannotate", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/pLannotate"}, {"uid": "github/RichardObi/medigan", "html_url": "https://rseng.github.io/software/repository/github/RichardObi/medigan", "api_url": "https://rseng.github.io/software/api/repos/github/RichardObi/medigan"}, {"uid": "github/zhangzzk/forklens", "html_url": "https://rseng.github.io/software/repository/github/zhangzzk/forklens", "api_url": "https://rseng.github.io/software/api/repos/github/zhangzzk/forklens"}, {"uid": "github/pontoppi/radlite", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/radlite", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/radlite"}, {"uid": "github/pontoppi/ctool", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/ctool", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/ctool"}, {"uid": "github/qqpigass/FREEPII", "html_url": "https://rseng.github.io/software/repository/github/qqpigass/FREEPII", "api_url": "https://rseng.github.io/software/api/repos/github/qqpigass/FREEPII"}, {"uid": "github/febos/SQUARNA", "html_url": "https://rseng.github.io/software/repository/github/febos/SQUARNA", "api_url": "https://rseng.github.io/software/api/repos/github/febos/SQUARNA"}, {"uid": "github/monarch-initiative/loinc2hpo", "html_url": "https://rseng.github.io/software/repository/github/monarch-initiative/loinc2hpo", "api_url": "https://rseng.github.io/software/api/repos/github/monarch-initiative/loinc2hpo"}, {"uid": "github/kieranatkins/gimp-image-annotator", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/gimp-image-annotator", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/gimp-image-annotator"}, {"uid": "github/kieranatkins/silique-detector", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/silique-detector", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/silique-detector"}, {"uid": "github/bacpop/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/bacpop/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/PopPUNK"}, {"uid": "github/bacpop/ska.rust", "html_url": "https://rseng.github.io/software/repository/github/bacpop/ska.rust", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/ska.rust"}, {"uid": "github/FrdCHK/serial-MultiView", "html_url": "https://rseng.github.io/software/repository/github/FrdCHK/serial-MultiView", "api_url": "https://rseng.github.io/software/api/repos/github/FrdCHK/serial-MultiView"}, {"uid": "github/koszullab/pareidolia", "html_url": "https://rseng.github.io/software/repository/github/koszullab/pareidolia", "api_url": "https://rseng.github.io/software/api/repos/github/koszullab/pareidolia"}, {"uid": "github/astroml/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroml/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroml/gatspy"}, {"uid": "github/mbursa/sim5", "html_url": "https://rseng.github.io/software/repository/github/mbursa/sim5", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/sim5"}, {"uid": "github/mbursa/disk-models", "html_url": "https://rseng.github.io/software/repository/github/mbursa/disk-models", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/disk-models"}, {"uid": "github/21cmfast/21cmEMU", "html_url": "https://rseng.github.io/software/repository/github/21cmfast/21cmEMU", "api_url": "https://rseng.github.io/software/api/repos/github/21cmfast/21cmEMU"}, {"uid": "github/GOVS-pack/GOVS", "html_url": "https://rseng.github.io/software/repository/github/GOVS-pack/GOVS", "api_url": "https://rseng.github.io/software/api/repos/github/GOVS-pack/GOVS"}, {"uid": "github/FlowModelingControl/flowtorch", "html_url": "https://rseng.github.io/software/repository/github/FlowModelingControl/flowtorch", "api_url": "https://rseng.github.io/software/api/repos/github/FlowModelingControl/flowtorch"}, {"uid": "github/nppackages/lpcde", "html_url": "https://rseng.github.io/software/repository/github/nppackages/lpcde", "api_url": "https://rseng.github.io/software/api/repos/github/nppackages/lpcde"}, {"uid": "github/lionandjelka/QhX1", "html_url": "https://rseng.github.io/software/repository/github/lionandjelka/QhX1", "api_url": "https://rseng.github.io/software/api/repos/github/lionandjelka/QhX1"}, {"uid": "github/WatsonLab/MAGpy", "html_url": "https://rseng.github.io/software/repository/github/WatsonLab/MAGpy", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonLab/MAGpy"}, {"uid": "github/DragonflyTelescope/dfreproject", "html_url": "https://rseng.github.io/software/repository/github/DragonflyTelescope/dfreproject", "api_url": "https://rseng.github.io/software/api/repos/github/DragonflyTelescope/dfreproject"}, {"uid": "github/fcastagna/preprofit", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/preprofit", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/preprofit"}, {"uid": "github/fcastagna/JoXSZ", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/JoXSZ", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/JoXSZ"}, {"uid": "github/JeffLCoughlin/EphemMatch", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/EphemMatch", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/EphemMatch"}, {"uid": "github/JeffLCoughlin/skye", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/skye", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/skye"}, {"uid": "github/LuShenJ/PyEMILI", "html_url": "https://rseng.github.io/software/repository/github/LuShenJ/PyEMILI", "api_url": "https://rseng.github.io/software/api/repos/github/LuShenJ/PyEMILI"}, {"uid": "github/benvanwerkhoven/kernel_tuner", "html_url": "https://rseng.github.io/software/repository/github/benvanwerkhoven/kernel_tuner", "api_url": "https://rseng.github.io/software/api/repos/github/benvanwerkhoven/kernel_tuner"}, {"uid": "github/AndrewAnnex/SpiceyPy", "html_url": "https://rseng.github.io/software/repository/github/AndrewAnnex/SpiceyPy", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewAnnex/SpiceyPy"}, {"uid": "github/chrisaberson/BetterReg", "html_url": "https://rseng.github.io/software/repository/github/chrisaberson/BetterReg", "api_url": "https://rseng.github.io/software/api/repos/github/chrisaberson/BetterReg"}, {"uid": "github/d-tear/SIAL", "html_url": "https://rseng.github.io/software/repository/github/d-tear/SIAL", "api_url": "https://rseng.github.io/software/api/repos/github/d-tear/SIAL"}, {"uid": "github/igorrivin/graphem", "html_url": "https://rseng.github.io/software/repository/github/igorrivin/graphem", "api_url": "https://rseng.github.io/software/api/repos/github/igorrivin/graphem"}, {"uid": "github/nkallima/sim-universal-construction", "html_url": "https://rseng.github.io/software/repository/github/nkallima/sim-universal-construction", "api_url": "https://rseng.github.io/software/api/repos/github/nkallima/sim-universal-construction"}, {"uid": "github/cjbarrie/academictwitteR", "html_url": "https://rseng.github.io/software/repository/github/cjbarrie/academictwitteR", "api_url": "https://rseng.github.io/software/api/repos/github/cjbarrie/academictwitteR"}, {"uid": "github/Tomaubier/CoperniFUS", "html_url": "https://rseng.github.io/software/repository/github/Tomaubier/CoperniFUS", "api_url": "https://rseng.github.io/software/api/repos/github/Tomaubier/CoperniFUS"}, {"uid": "github/AarhusCosmology/connect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/connect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/connect_public"}, {"uid": "github/AarhusCosmology/prospect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/prospect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/prospect_public"}, {"uid": "github/niceume/datasailr", "html_url": "https://rseng.github.io/software/repository/github/niceume/datasailr", "api_url": "https://rseng.github.io/software/api/repos/github/niceume/datasailr"}, {"uid": "github/JLiangLab/TransVW", "html_url": "https://rseng.github.io/software/repository/github/JLiangLab/TransVW", "api_url": "https://rseng.github.io/software/api/repos/github/JLiangLab/TransVW"}, {"uid": "github/BattModels/asimtools", "html_url": "https://rseng.github.io/software/repository/github/BattModels/asimtools", "api_url": "https://rseng.github.io/software/api/repos/github/BattModels/asimtools"}, {"uid": "github/databio/GenomicDistributions", "html_url": "https://rseng.github.io/software/repository/github/databio/GenomicDistributions", "api_url": "https://rseng.github.io/software/api/repos/github/databio/GenomicDistributions"}, {"uid": "github/PathwayCommons/grounding-search", "html_url": "https://rseng.github.io/software/repository/github/PathwayCommons/grounding-search", "api_url": "https://rseng.github.io/software/api/repos/github/PathwayCommons/grounding-search"}, {"uid": "github/darrencroton/sage", "html_url": "https://rseng.github.io/software/repository/github/darrencroton/sage", "api_url": "https://rseng.github.io/software/api/repos/github/darrencroton/sage"}, {"uid": "github/sklasfeld/DANPOS3", "html_url": "https://rseng.github.io/software/repository/github/sklasfeld/DANPOS3", "api_url": "https://rseng.github.io/software/api/repos/github/sklasfeld/DANPOS3"}, {"uid": "github/SchmidtDSE/afscgap", "html_url": "https://rseng.github.io/software/repository/github/SchmidtDSE/afscgap", "api_url": "https://rseng.github.io/software/api/repos/github/SchmidtDSE/afscgap"}, {"uid": "github/forceflow1049/phast", "html_url": "https://rseng.github.io/software/repository/github/forceflow1049/phast", "api_url": "https://rseng.github.io/software/api/repos/github/forceflow1049/phast"}, {"uid": "github/pvlib/pvlib-python", "html_url": "https://rseng.github.io/software/repository/github/pvlib/pvlib-python", "api_url": "https://rseng.github.io/software/api/repos/github/pvlib/pvlib-python"}, {"uid": "github/eleniadam/npgreat", "html_url": "https://rseng.github.io/software/repository/github/eleniadam/npgreat", "api_url": "https://rseng.github.io/software/api/repos/github/eleniadam/npgreat"}, {"uid": "github/kevin218/Eureka", "html_url": "https://rseng.github.io/software/repository/github/kevin218/Eureka", "api_url": "https://rseng.github.io/software/api/repos/github/kevin218/Eureka"}, {"uid": "github/arvados/arvados", "html_url": "https://rseng.github.io/software/repository/github/arvados/arvados", "api_url": "https://rseng.github.io/software/api/repos/github/arvados/arvados"}, {"uid": "github/arnikz/PIQMIe", "html_url": "https://rseng.github.io/software/repository/github/arnikz/PIQMIe", "api_url": "https://rseng.github.io/software/api/repos/github/arnikz/PIQMIe"}, {"uid": "github/mpeel/fastcc", "html_url": "https://rseng.github.io/software/repository/github/mpeel/fastcc", "api_url": "https://rseng.github.io/software/api/repos/github/mpeel/fastcc"}, {"uid": "github/mastodon-sc/mastodon-deep-lineage", "html_url": "https://rseng.github.io/software/repository/github/mastodon-sc/mastodon-deep-lineage", "api_url": "https://rseng.github.io/software/api/repos/github/mastodon-sc/mastodon-deep-lineage"}, {"uid": "github/ChengF-Lab/AOPEDF", "html_url": "https://rseng.github.io/software/repository/github/ChengF-Lab/AOPEDF", "api_url": "https://rseng.github.io/software/api/repos/github/ChengF-Lab/AOPEDF"}, {"uid": "github/IMMM-SFA/naturf", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/naturf", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/naturf"}, {"uid": "github/IMMM-SFA/statemodify", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/statemodify", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/statemodify"}, {"uid": "github/IMMM-SFA/gamut", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/gamut", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/gamut"}, {"uid": "github/IMMM-SFA/tell", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/tell", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/tell"}, {"uid": "github/IMMM-SFA/mosartwmpy", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/mosartwmpy", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/mosartwmpy"}, {"uid": "github/KathrynJones1/catwoman", "html_url": "https://rseng.github.io/software/repository/github/KathrynJones1/catwoman", "api_url": "https://rseng.github.io/software/api/repos/github/KathrynJones1/catwoman"}, {"uid": "github/timothydmorton/vespa", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/vespa", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/vespa"}, {"uid": "github/timothydmorton/isochrones", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/isochrones", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/isochrones"}, {"uid": "github/pyspeckit/pyspeckit", "html_url": "https://rseng.github.io/software/repository/github/pyspeckit/pyspeckit", "api_url": "https://rseng.github.io/software/api/repos/github/pyspeckit/pyspeckit"}, {"uid": "github/jfoster17/extinction-distances", "html_url": "https://rseng.github.io/software/repository/github/jfoster17/extinction-distances", "api_url": "https://rseng.github.io/software/api/repos/github/jfoster17/extinction-distances"}, {"uid": "github/enthusi/feline", "html_url": "https://rseng.github.io/software/repository/github/enthusi/feline", "api_url": "https://rseng.github.io/software/api/repos/github/enthusi/feline"}, {"uid": "github/robertwissing/EOS", "html_url": "https://rseng.github.io/software/repository/github/robertwissing/EOS", "api_url": "https://rseng.github.io/software/api/repos/github/robertwissing/EOS"}, {"uid": "github/RozanskiT/suppnet", "html_url": "https://rseng.github.io/software/repository/github/RozanskiT/suppnet", "api_url": "https://rseng.github.io/software/api/repos/github/RozanskiT/suppnet"}, {"uid": "github/lazzati-astro/MCRaT", "html_url": "https://rseng.github.io/software/repository/github/lazzati-astro/MCRaT", "api_url": "https://rseng.github.io/software/api/repos/github/lazzati-astro/MCRaT"}, {"uid": "github/IslasGECI/nerd", "html_url": "https://rseng.github.io/software/repository/github/IslasGECI/nerd", "api_url": "https://rseng.github.io/software/api/repos/github/IslasGECI/nerd"}, {"uid": "github/astro-otter/otter", "html_url": "https://rseng.github.io/software/repository/github/astro-otter/otter", "api_url": "https://rseng.github.io/software/api/repos/github/astro-otter/otter"}, {"uid": "github/UFParLab/aces4", "html_url": "https://rseng.github.io/software/repository/github/UFParLab/aces4", "api_url": "https://rseng.github.io/software/api/repos/github/UFParLab/aces4"}, {"uid": "github/scotthgn/relagn", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/relagn", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/relagn"}, {"uid": "github/scotthgn/AGNvar", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/AGNvar", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/AGNvar"}, {"uid": "github/DrMarc/slab", "html_url": "https://rseng.github.io/software/repository/github/DrMarc/slab", "api_url": "https://rseng.github.io/software/api/repos/github/DrMarc/slab"}, {"uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", "html_url": "https://rseng.github.io/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", "api_url": "https://rseng.github.io/software/api/repos/github/TeHanHunter/TESS_Gaia_Light_Curve"}, {"uid": "github/helenqu/scone", "html_url": "https://rseng.github.io/software/repository/github/helenqu/scone", "api_url": "https://rseng.github.io/software/api/repos/github/helenqu/scone"}, {"uid": "github/hematthi/SysSimPyPlots", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyPlots", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyPlots"}, {"uid": "github/hematthi/SysSimPyMMEN", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyMMEN", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyMMEN"}, {"uid": "github/nifty-ppl/nifty", "html_url": "https://rseng.github.io/software/repository/github/nifty-ppl/nifty", "api_url": "https://rseng.github.io/software/api/repos/github/nifty-ppl/nifty"}, {"uid": "github/realfastvla/realfast", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/realfast", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/realfast"}, {"uid": "github/realfastvla/rfpipe", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/rfpipe", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/rfpipe"}, {"uid": "github/lynx-x-ray-observatory/soxs", "html_url": "https://rseng.github.io/software/repository/github/lynx-x-ray-observatory/soxs", "api_url": "https://rseng.github.io/software/api/repos/github/lynx-x-ray-observatory/soxs"}, {"uid": "github/ledatelescope/bifrost", "html_url": "https://rseng.github.io/software/repository/github/ledatelescope/bifrost", "api_url": "https://rseng.github.io/software/api/repos/github/ledatelescope/bifrost"}, {"uid": "github/MNiwano/Eclaire", "html_url": "https://rseng.github.io/software/repository/github/MNiwano/Eclaire", "api_url": "https://rseng.github.io/software/api/repos/github/MNiwano/Eclaire"}, {"uid": "github/FabianPlum/OmniTrax", "html_url": "https://rseng.github.io/software/repository/github/FabianPlum/OmniTrax", "api_url": "https://rseng.github.io/software/api/repos/github/FabianPlum/OmniTrax"}, {"uid": "github/sourmash-bio/sourmash", "html_url": "https://rseng.github.io/software/repository/github/sourmash-bio/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/sourmash-bio/sourmash"}, {"uid": "github/AndresRTejedor/Mold", "html_url": "https://rseng.github.io/software/repository/github/AndresRTejedor/Mold", "api_url": "https://rseng.github.io/software/api/repos/github/AndresRTejedor/Mold"}, {"uid": "github/suchanek/proteusPy", "html_url": "https://rseng.github.io/software/repository/github/suchanek/proteusPy", "api_url": "https://rseng.github.io/software/api/repos/github/suchanek/proteusPy"}, {"uid": "github/bulik/ldsc", "html_url": "https://rseng.github.io/software/repository/github/bulik/ldsc", "api_url": "https://rseng.github.io/software/api/repos/github/bulik/ldsc"}, {"uid": "github/BioGearsEngine/core", "html_url": "https://rseng.github.io/software/repository/github/BioGearsEngine/core", "api_url": "https://rseng.github.io/software/api/repos/github/BioGearsEngine/core"}, {"uid": "github/jeetsukumaran/DendroPy", "html_url": "https://rseng.github.io/software/repository/github/jeetsukumaran/DendroPy", "api_url": "https://rseng.github.io/software/api/repos/github/jeetsukumaran/DendroPy"}, {"uid": "github/ben-cassese/squishyplanet", "html_url": "https://rseng.github.io/software/repository/github/ben-cassese/squishyplanet", "api_url": "https://rseng.github.io/software/api/repos/github/ben-cassese/squishyplanet"}, {"uid": "github/rgerum/pylustrator", "html_url": "https://rseng.github.io/software/repository/github/rgerum/pylustrator", "api_url": "https://rseng.github.io/software/api/repos/github/rgerum/pylustrator"}, {"uid": "github/alexriss/SpmImageTycoon.jl", "html_url": "https://rseng.github.io/software/repository/github/alexriss/SpmImageTycoon.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alexriss/SpmImageTycoon.jl"}, {"uid": "github/tzhu-bio/UMI-ATAC-seq", "html_url": "https://rseng.github.io/software/repository/github/tzhu-bio/UMI-ATAC-seq", "api_url": "https://rseng.github.io/software/api/repos/github/tzhu-bio/UMI-ATAC-seq"}, {"uid": "github/carpenterphysics/DarkFlux", "html_url": "https://rseng.github.io/software/repository/github/carpenterphysics/DarkFlux", "api_url": "https://rseng.github.io/software/api/repos/github/carpenterphysics/DarkFlux"}, {"uid": "github/idaholab/MontePy", "html_url": "https://rseng.github.io/software/repository/github/idaholab/MontePy", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/MontePy"}, {"uid": "github/idaholab/moose", "html_url": "https://rseng.github.io/software/repository/github/idaholab/moose", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/moose"}, {"uid": "github/astro-group-bristol/Gradus.jl", "html_url": "https://rseng.github.io/software/repository/github/astro-group-bristol/Gradus.jl", "api_url": "https://rseng.github.io/software/api/repos/github/astro-group-bristol/Gradus.jl"}, {"uid": "github/BU-ISCIII/plasmidID", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/plasmidID", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/plasmidID"}, {"uid": "github/BU-ISCIII/taranis", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/taranis", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/taranis"}, {"uid": "github/BU-ISCIII/iSkyLIMS", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/iSkyLIMS", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/iSkyLIMS"}, {"uid": "github/SKA-INAF/caesar-rest", "html_url": "https://rseng.github.io/software/repository/github/SKA-INAF/caesar-rest", "api_url": "https://rseng.github.io/software/api/repos/github/SKA-INAF/caesar-rest"}, {"uid": "github/Peppags/CNN-SVR", "html_url": "https://rseng.github.io/software/repository/github/Peppags/CNN-SVR", "api_url": "https://rseng.github.io/software/api/repos/github/Peppags/CNN-SVR"}, {"uid": "github/snek5000/snek5000", "html_url": "https://rseng.github.io/software/repository/github/snek5000/snek5000", "api_url": "https://rseng.github.io/software/api/repos/github/snek5000/snek5000"}, {"uid": "github/BlauGroup/RNMC", "html_url": "https://rseng.github.io/software/repository/github/BlauGroup/RNMC", "api_url": "https://rseng.github.io/software/api/repos/github/BlauGroup/RNMC"}, {"uid": "github/ExoJulia/SysSimExClusters", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/SysSimExClusters", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/SysSimExClusters"}, {"uid": "github/ExoJulia/ExoplanetsSysSim.jl", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/ExoplanetsSysSim.jl"}, {"uid": "github/czbiohub/cerebra", "html_url": "https://rseng.github.io/software/repository/github/czbiohub/cerebra", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub/cerebra"}, {"uid": "github/eblur/dust", "html_url": "https://rseng.github.io/software/repository/github/eblur/dust", "api_url": "https://rseng.github.io/software/api/repos/github/eblur/dust"}, {"uid": "github/bic-nirrh/precocity", "html_url": "https://rseng.github.io/software/repository/github/bic-nirrh/precocity", "api_url": "https://rseng.github.io/software/api/repos/github/bic-nirrh/precocity"}, {"uid": "github/easystats/performance", "html_url": "https://rseng.github.io/software/repository/github/easystats/performance", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/performance"}, {"uid": "github/easystats/correlation", "html_url": "https://rseng.github.io/software/repository/github/easystats/correlation", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/correlation"}, {"uid": "github/easystats/modelbased", "html_url": "https://rseng.github.io/software/repository/github/easystats/modelbased", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/modelbased"}, {"uid": "github/easystats/parameters", "html_url": "https://rseng.github.io/software/repository/github/easystats/parameters", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/parameters"}, {"uid": "github/easystats/effectsize", "html_url": "https://rseng.github.io/software/repository/github/easystats/effectsize", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/effectsize"}, {"uid": "github/Chenmi0619/GALMoss", "html_url": "https://rseng.github.io/software/repository/github/Chenmi0619/GALMoss", "api_url": "https://rseng.github.io/software/api/repos/github/Chenmi0619/GALMoss"}, {"uid": "github/scrm/scrmhub.io", "html_url": "https://rseng.github.io/software/repository/github/scrm/scrmhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/scrm/scrmhub.io"}, {"uid": "github/dieghernan/tidyterra", "html_url": "https://rseng.github.io/software/repository/github/dieghernan/tidyterra", "api_url": "https://rseng.github.io/software/api/repos/github/dieghernan/tidyterra"}, {"uid": "github/maho3/ltu-ili", "html_url": "https://rseng.github.io/software/repository/github/maho3/ltu-ili", "api_url": "https://rseng.github.io/software/api/repos/github/maho3/ltu-ili"}, {"uid": "github/myfang2021/VIPPID", "html_url": "https://rseng.github.io/software/repository/github/myfang2021/VIPPID", "api_url": "https://rseng.github.io/software/api/repos/github/myfang2021/VIPPID"}, {"uid": "github/siavash-saki/tesspy", "html_url": "https://rseng.github.io/software/repository/github/siavash-saki/tesspy", "api_url": "https://rseng.github.io/software/api/repos/github/siavash-saki/tesspy"}, {"uid": "github/jkluter/MLG", "html_url": "https://rseng.github.io/software/repository/github/jkluter/MLG", "api_url": "https://rseng.github.io/software/api/repos/github/jkluter/MLG"}, {"uid": "github/Bgi-LUSH/GPMeta", "html_url": "https://rseng.github.io/software/repository/github/Bgi-LUSH/GPMeta", "api_url": "https://rseng.github.io/software/api/repos/github/Bgi-LUSH/GPMeta"}, {"uid": "github/VU-BEAM-Lab/GENRE", "html_url": "https://rseng.github.io/software/repository/github/VU-BEAM-Lab/GENRE", "api_url": "https://rseng.github.io/software/api/repos/github/VU-BEAM-Lab/GENRE"}, {"uid": "github/netsiphd/netrd", "html_url": "https://rseng.github.io/software/repository/github/netsiphd/netrd", "api_url": "https://rseng.github.io/software/api/repos/github/netsiphd/netrd"}, {"uid": "github/fury-gl/fury", "html_url": "https://rseng.github.io/software/repository/github/fury-gl/fury", "api_url": "https://rseng.github.io/software/api/repos/github/fury-gl/fury"}, {"uid": "github/AlanPearl/diffopt", "html_url": "https://rseng.github.io/software/repository/github/AlanPearl/diffopt", "api_url": "https://rseng.github.io/software/api/repos/github/AlanPearl/diffopt"}, {"uid": "github/ADAH-EviDENce/evidence", "html_url": "https://rseng.github.io/software/repository/github/ADAH-EviDENce/evidence", "api_url": "https://rseng.github.io/software/api/repos/github/ADAH-EviDENce/evidence"}, {"uid": "github/shangguandong1996/FindIT2", "html_url": "https://rseng.github.io/software/repository/github/shangguandong1996/FindIT2", "api_url": "https://rseng.github.io/software/api/repos/github/shangguandong1996/FindIT2"}, {"uid": "github/TriPed-Robot/TriP", "html_url": "https://rseng.github.io/software/repository/github/TriPed-Robot/TriP", "api_url": "https://rseng.github.io/software/api/repos/github/TriPed-Robot/TriP"}, {"uid": "github/mperezcarrasco/AnomalyALeRCE", "html_url": "https://rseng.github.io/software/repository/github/mperezcarrasco/AnomalyALeRCE", "api_url": "https://rseng.github.io/software/api/repos/github/mperezcarrasco/AnomalyALeRCE"}, {"uid": "github/SAIL-Labs/AMICAL", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/AMICAL", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/AMICAL"}, {"uid": "github/NielsenBerkeleyLab/sconce", "html_url": "https://rseng.github.io/software/repository/github/NielsenBerkeleyLab/sconce", "api_url": "https://rseng.github.io/software/api/repos/github/NielsenBerkeleyLab/sconce"}, {"uid": "github/heliopython/heliopy", "html_url": "https://rseng.github.io/software/repository/github/heliopython/heliopy", "api_url": "https://rseng.github.io/software/api/repos/github/heliopython/heliopy"}, {"uid": "github/pierrebarbera/epa-ng", "html_url": "https://rseng.github.io/software/repository/github/pierrebarbera/epa-ng", "api_url": "https://rseng.github.io/software/api/repos/github/pierrebarbera/epa-ng"}, {"uid": "github/zpenoyre/CausticFrog", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/CausticFrog", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/CausticFrog"}, {"uid": "github/zpenoyre/OoT", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/OoT", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/OoT"}, {"uid": "github/tmcclintock/cluster_toolkit", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/cluster_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/cluster_toolkit"}, {"uid": "github/tmcclintock/AReconstructionTool", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/AReconstructionTool", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/AReconstructionTool"}, {"uid": "github/fpavogt/fcmaker", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/fcmaker", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/fcmaker"}, {"uid": "github/fpavogt/E0102-VR", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/E0102-VR", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/E0102-VR"}, {"uid": "github/PRIDE-Archive/pridepy", "html_url": "https://rseng.github.io/software/repository/github/PRIDE-Archive/pridepy", "api_url": "https://rseng.github.io/software/api/repos/github/PRIDE-Archive/pridepy"}, {"uid": "github/ReSurfEMG/ReSurfEMG", "html_url": "https://rseng.github.io/software/repository/github/ReSurfEMG/ReSurfEMG", "api_url": "https://rseng.github.io/software/api/repos/github/ReSurfEMG/ReSurfEMG"}, {"uid": "github/STEllAR-GROUP/octotiger", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/octotiger", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/octotiger"}, {"uid": "github/STEllAR-GROUP/hpx", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/hpx", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/hpx"}, {"uid": "github/cicirello/rho-mu", "html_url": "https://rseng.github.io/software/repository/github/cicirello/rho-mu", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/rho-mu"}, {"uid": "github/cicirello/Chips-n-Salsa", "html_url": "https://rseng.github.io/software/repository/github/cicirello/Chips-n-Salsa", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/Chips-n-Salsa"}, {"uid": "github/VeinsOfTheEarth/rabpro", "html_url": "https://rseng.github.io/software/repository/github/VeinsOfTheEarth/rabpro", "api_url": "https://rseng.github.io/software/api/repos/github/VeinsOfTheEarth/rabpro"}, {"uid": "github/deeprob/ThioesteraseEnzymeSpecificity", "html_url": "https://rseng.github.io/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", "api_url": "https://rseng.github.io/software/api/repos/github/deeprob/ThioesteraseEnzymeSpecificity"}, {"uid": "github/CMC-lab/TranCIT", "html_url": "https://rseng.github.io/software/repository/github/CMC-lab/TranCIT", "api_url": "https://rseng.github.io/software/api/repos/github/CMC-lab/TranCIT"}, {"uid": "github/keatonb/Pyriod", "html_url": "https://rseng.github.io/software/repository/github/keatonb/Pyriod", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/Pyriod"}, {"uid": "github/keatonb/TESS_PRF", "html_url": "https://rseng.github.io/software/repository/github/keatonb/TESS_PRF", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/TESS_PRF"}, {"uid": "github/vpc-ccg/svict", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/svict", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/svict"}, {"uid": "github/vpc-ccg/genion", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/genion", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/genion"}, {"uid": "github/vpc-ccg/calib", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/calib", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/calib"}, {"uid": "github/reality/klarigi", "html_url": "https://rseng.github.io/software/repository/github/reality/klarigi", "api_url": "https://rseng.github.io/software/api/repos/github/reality/klarigi"}, {"uid": "github/SMTG-Bham/doped", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/doped", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/doped"}, {"uid": "github/SMTG-Bham/ThermoParser", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/ThermoParser", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/ThermoParser"}, {"uid": "github/matthiaslee/Xmatch", "html_url": "https://rseng.github.io/software/repository/github/matthiaslee/Xmatch", "api_url": "https://rseng.github.io/software/api/repos/github/matthiaslee/Xmatch"}, {"uid": "github/osallou/cassiopee-c", "html_url": "https://rseng.github.io/software/repository/github/osallou/cassiopee-c", "api_url": "https://rseng.github.io/software/api/repos/github/osallou/cassiopee-c"}, {"uid": "github/openmsr/CAD_to_OpenMC", "html_url": "https://rseng.github.io/software/repository/github/openmsr/CAD_to_OpenMC", "api_url": "https://rseng.github.io/software/api/repos/github/openmsr/CAD_to_OpenMC"}, {"uid": "github/liuhao-cn/fastSHT", "html_url": "https://rseng.github.io/software/repository/github/liuhao-cn/fastSHT", "api_url": "https://rseng.github.io/software/api/repos/github/liuhao-cn/fastSHT"}, {"uid": "github/lucadimascolo/socca", "html_url": "https://rseng.github.io/software/repository/github/lucadimascolo/socca", "api_url": "https://rseng.github.io/software/api/repos/github/lucadimascolo/socca"}, {"uid": "github/mpi4py/shmem4py", "html_url": "https://rseng.github.io/software/repository/github/mpi4py/shmem4py", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4py/shmem4py"}, {"uid": "github/ICESat2-SlideRule/paper", "html_url": "https://rseng.github.io/software/repository/github/ICESat2-SlideRule/paper", "api_url": "https://rseng.github.io/software/api/repos/github/ICESat2-SlideRule/paper"}, {"uid": "github/ebundhoo/TAGOPSIN", "html_url": "https://rseng.github.io/software/repository/github/ebundhoo/TAGOPSIN", "api_url": "https://rseng.github.io/software/api/repos/github/ebundhoo/TAGOPSIN"}, {"uid": "github/gbrammer/unicorn", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/unicorn", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/unicorn"}, {"uid": "github/gbrammer/grizli", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/grizli", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/grizli"}, {"uid": "github/gbrammer/threedhst", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/threedhst", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/threedhst"}, {"uid": "github/MD-Studio/MDStudio", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/MDStudio", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/MDStudio"}, {"uid": "github/MD-Studio/cerise", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerise", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerise"}, {"uid": "github/MD-Studio/cerulean", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerulean", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerulean"}, {"uid": "github/gpertea/cdbfasta", "html_url": "https://rseng.github.io/software/repository/github/gpertea/cdbfasta", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/cdbfasta"}, {"uid": "github/gpertea/gclib", "html_url": "https://rseng.github.io/software/repository/github/gpertea/gclib", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/gclib"}, {"uid": "github/yiwenstat/MCPCA_PopGen", "html_url": "https://rseng.github.io/software/repository/github/yiwenstat/MCPCA_PopGen", "api_url": "https://rseng.github.io/software/api/repos/github/yiwenstat/MCPCA_PopGen"}, {"uid": "github/martinjameswhite/ZeldovichRecon", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/ZeldovichRecon", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/ZeldovichRecon"}, {"uid": "github/martinjameswhite/directsht", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/directsht", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/directsht"}, {"uid": "github/lanzen/ampliconnoise", "html_url": "https://rseng.github.io/software/repository/github/lanzen/ampliconnoise", "api_url": "https://rseng.github.io/software/api/repos/github/lanzen/ampliconnoise"}, {"uid": "github/wtsi-hpag/HiLine", "html_url": "https://rseng.github.io/software/repository/github/wtsi-hpag/HiLine", "api_url": "https://rseng.github.io/software/api/repos/github/wtsi-hpag/HiLine"}, {"uid": "github/pysam-developers/pysam", "html_url": "https://rseng.github.io/software/repository/github/pysam-developers/pysam", "api_url": "https://rseng.github.io/software/api/repos/github/pysam-developers/pysam"}, {"uid": "github/astrorama/sourcextractorplusplus", "html_url": "https://rseng.github.io/software/repository/github/astrorama/sourcextractorplusplus", "api_url": "https://rseng.github.io/software/api/repos/github/astrorama/sourcextractorplusplus"}, {"uid": "github/gbouras13/plassembler", "html_url": "https://rseng.github.io/software/repository/github/gbouras13/plassembler", "api_url": "https://rseng.github.io/software/api/repos/github/gbouras13/plassembler"}, {"uid": "github/SuperKogito/spafe", "html_url": "https://rseng.github.io/software/repository/github/SuperKogito/spafe", "api_url": "https://rseng.github.io/software/api/repos/github/SuperKogito/spafe"}, {"uid": "github/amkram/shusher", "html_url": "https://rseng.github.io/software/repository/github/amkram/shusher", "api_url": "https://rseng.github.io/software/api/repos/github/amkram/shusher"}, {"uid": "github/gabo-di/AquaCrop.jl", "html_url": "https://rseng.github.io/software/repository/github/gabo-di/AquaCrop.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gabo-di/AquaCrop.jl"}, {"uid": "github/winni2k/abeona", "html_url": "https://rseng.github.io/software/repository/github/winni2k/abeona", "api_url": "https://rseng.github.io/software/api/repos/github/winni2k/abeona"}, {"uid": "github/alercebroker/ATAT", "html_url": "https://rseng.github.io/software/repository/github/alercebroker/ATAT", "api_url": "https://rseng.github.io/software/api/repos/github/alercebroker/ATAT"}, {"uid": "github/pysersic/pysersic", "html_url": "https://rseng.github.io/software/repository/github/pysersic/pysersic", "api_url": "https://rseng.github.io/software/api/repos/github/pysersic/pysersic"}, {"uid": "github/mpokorny/vysmaw", "html_url": "https://rseng.github.io/software/repository/github/mpokorny/vysmaw", "api_url": "https://rseng.github.io/software/api/repos/github/mpokorny/vysmaw"}, {"uid": "github/ctSkennerton/crass", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/crass", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/crass"}, {"uid": "github/ctSkennerton/minced", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/minced", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/minced"}, {"uid": "github/marcocalza89/GrayHawk", "html_url": "https://rseng.github.io/software/repository/github/marcocalza89/GrayHawk", "api_url": "https://rseng.github.io/software/api/repos/github/marcocalza89/GrayHawk"}, {"uid": "github/jadexter/grtrans", "html_url": "https://rseng.github.io/software/repository/github/jadexter/grtrans", "api_url": "https://rseng.github.io/software/api/repos/github/jadexter/grtrans"}, {"uid": "github/chemfiles/chemfiles", "html_url": "https://rseng.github.io/software/repository/github/chemfiles/chemfiles", "api_url": "https://rseng.github.io/software/api/repos/github/chemfiles/chemfiles"}, {"uid": "github/srigas/jaxkan", "html_url": "https://rseng.github.io/software/repository/github/srigas/jaxkan", "api_url": "https://rseng.github.io/software/api/repos/github/srigas/jaxkan"}, {"uid": "github/spokenlanguage/platalea", "html_url": "https://rseng.github.io/software/repository/github/spokenlanguage/platalea", "api_url": "https://rseng.github.io/software/api/repos/github/spokenlanguage/platalea"}, {"uid": "github/hpdps-group/SolarZip", "html_url": "https://rseng.github.io/software/repository/github/hpdps-group/SolarZip", "api_url": "https://rseng.github.io/software/api/repos/github/hpdps-group/SolarZip"}, {"uid": "github/isce-framework/dolphin", "html_url": "https://rseng.github.io/software/repository/github/isce-framework/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/isce-framework/dolphin"}, {"uid": "github/pysat/pysat", "html_url": "https://rseng.github.io/software/repository/github/pysat/pysat", "api_url": "https://rseng.github.io/software/api/repos/github/pysat/pysat"}, {"uid": "github/JuliaAI/Imbalance.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaAI/Imbalance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaAI/Imbalance.jl"}, {"uid": "github/9505-PNNL/wmpy_power", "html_url": "https://rseng.github.io/software/repository/github/9505-PNNL/wmpy_power", "api_url": "https://rseng.github.io/software/api/repos/github/9505-PNNL/wmpy_power"}, {"uid": "github/BiaPyX/BiaPy", "html_url": "https://rseng.github.io/software/repository/github/BiaPyX/BiaPy", "api_url": "https://rseng.github.io/software/api/repos/github/BiaPyX/BiaPy"}, {"uid": "github/DiseaseTranscriptomicsLab/scStudio", "html_url": "https://rseng.github.io/software/repository/github/DiseaseTranscriptomicsLab/scStudio", "api_url": "https://rseng.github.io/software/api/repos/github/DiseaseTranscriptomicsLab/scStudio"}, {"uid": "github/i-VRESSE/workflow-builder", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/workflow-builder", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/workflow-builder"}, {"uid": "github/i-VRESSE/pdbtbx-ts", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/pdbtbx-ts", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/pdbtbx-ts"}, {"uid": "github/ihmwg/python-modelcif", "html_url": "https://rseng.github.io/software/repository/github/ihmwg/python-modelcif", "api_url": "https://rseng.github.io/software/api/repos/github/ihmwg/python-modelcif"}, {"uid": "github/dfujim/bfit", "html_url": "https://rseng.github.io/software/repository/github/dfujim/bfit", "api_url": "https://rseng.github.io/software/api/repos/github/dfujim/bfit"}, {"uid": "github/areenberg/MDPSolver", "html_url": "https://rseng.github.io/software/repository/github/areenberg/MDPSolver", "api_url": "https://rseng.github.io/software/api/repos/github/areenberg/MDPSolver"}, {"uid": "github/griffithlab/regtools", "html_url": "https://rseng.github.io/software/repository/github/griffithlab/regtools", "api_url": "https://rseng.github.io/software/api/repos/github/griffithlab/regtools"}, {"uid": "github/Robaina/Pynteny", "html_url": "https://rseng.github.io/software/repository/github/Robaina/Pynteny", "api_url": "https://rseng.github.io/software/api/repos/github/Robaina/Pynteny"}, {"uid": "github/easybuilders/easybuild", "html_url": "https://rseng.github.io/software/repository/github/easybuilders/easybuild", "api_url": "https://rseng.github.io/software/api/repos/github/easybuilders/easybuild"}, {"uid": "github/DynaSlum/satsense", "html_url": "https://rseng.github.io/software/repository/github/DynaSlum/satsense", "api_url": "https://rseng.github.io/software/api/repos/github/DynaSlum/satsense"}, {"uid": "github/valentingar/confluxpro", "html_url": "https://rseng.github.io/software/repository/github/valentingar/confluxpro", "api_url": "https://rseng.github.io/software/api/repos/github/valentingar/confluxpro"}, {"uid": "github/damienmarsic/Parent-map", "html_url": "https://rseng.github.io/software/repository/github/damienmarsic/Parent-map", "api_url": "https://rseng.github.io/software/api/repos/github/damienmarsic/Parent-map"}, {"uid": "github/sinanozaydin/pide", "html_url": "https://rseng.github.io/software/repository/github/sinanozaydin/pide", "api_url": "https://rseng.github.io/software/api/repos/github/sinanozaydin/pide"}, {"uid": "github/citiususc/BigSeqKit", "html_url": "https://rseng.github.io/software/repository/github/citiususc/BigSeqKit", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/BigSeqKit"}, {"uid": "github/citiususc/veryfasttree", "html_url": "https://rseng.github.io/software/repository/github/citiususc/veryfasttree", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/veryfasttree"}, {"uid": "github/gagneurlab/drop", "html_url": "https://rseng.github.io/software/repository/github/gagneurlab/drop", "api_url": "https://rseng.github.io/software/api/repos/github/gagneurlab/drop"}, {"uid": "github/sbebo/joypy", "html_url": "https://rseng.github.io/software/repository/github/sbebo/joypy", "api_url": "https://rseng.github.io/software/api/repos/github/sbebo/joypy"}, {"uid": "github/slacgismo/solar-data-tools", "html_url": "https://rseng.github.io/software/repository/github/slacgismo/solar-data-tools", "api_url": "https://rseng.github.io/software/api/repos/github/slacgismo/solar-data-tools"}, {"uid": "github/gxiaolab/scAllele", "html_url": "https://rseng.github.io/software/repository/github/gxiaolab/scAllele", "api_url": "https://rseng.github.io/software/api/repos/github/gxiaolab/scAllele"}, {"uid": "github/ilikecubesnstuff/commensurability", "html_url": "https://rseng.github.io/software/repository/github/ilikecubesnstuff/commensurability", "api_url": "https://rseng.github.io/software/api/repos/github/ilikecubesnstuff/commensurability"}, {"uid": "github/AndrewGibbs/PathFinder", "html_url": "https://rseng.github.io/software/repository/github/AndrewGibbs/PathFinder", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewGibbs/PathFinder"}, {"uid": "github/james-trayford/strauss", "html_url": "https://rseng.github.io/software/repository/github/james-trayford/strauss", "api_url": "https://rseng.github.io/software/api/repos/github/james-trayford/strauss"}, {"uid": "github/asntech/intervene", "html_url": "https://rseng.github.io/software/repository/github/asntech/intervene", "api_url": "https://rseng.github.io/software/api/repos/github/asntech/intervene"}, {"uid": "github/JosephIsaacTurner/pypaperretriever", "html_url": "https://rseng.github.io/software/repository/github/JosephIsaacTurner/pypaperretriever", "api_url": "https://rseng.github.io/software/api/repos/github/JosephIsaacTurner/pypaperretriever"}, {"uid": "github/idefix-code/idefix", "html_url": "https://rseng.github.io/software/repository/github/idefix-code/idefix", "api_url": "https://rseng.github.io/software/api/repos/github/idefix-code/idefix"}, {"uid": "github/WentaoZhan1998/geospaNN", "html_url": "https://rseng.github.io/software/repository/github/WentaoZhan1998/geospaNN", "api_url": "https://rseng.github.io/software/api/repos/github/WentaoZhan1998/geospaNN"}, {"uid": "github/kircherlab/ReMM", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/ReMM", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/ReMM"}, {"uid": "github/kircherlab/cfDNA-UniFlow", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/cfDNA-UniFlow", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/cfDNA-UniFlow"}, {"uid": "github/alexander-mead/HMcode", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/HMcode", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/HMcode"}, {"uid": "github/alexander-mead/collapse", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/collapse", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/collapse"}, {"uid": "github/alexander-mead/pyhalomodel", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/pyhalomodel", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/pyhalomodel"}, {"uid": "github/wvanzeist/riroriro", "html_url": "https://rseng.github.io/software/repository/github/wvanzeist/riroriro", "api_url": "https://rseng.github.io/software/api/repos/github/wvanzeist/riroriro"}, {"uid": "github/CRPropa/CRPropa2", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa2", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa2"}, {"uid": "github/CRPropa/CRPropa3", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa3", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa3"}, {"uid": "github/mwoodbri/MRIdb", "html_url": "https://rseng.github.io/software/repository/github/mwoodbri/MRIdb", "api_url": "https://rseng.github.io/software/api/repos/github/mwoodbri/MRIdb"}, {"uid": "github/FePhyFoFum/phyx", "html_url": "https://rseng.github.io/software/repository/github/FePhyFoFum/phyx", "api_url": "https://rseng.github.io/software/api/repos/github/FePhyFoFum/phyx"}, {"uid": "github/mraveri/tensiometer", "html_url": "https://rseng.github.io/software/repository/github/mraveri/tensiometer", "api_url": "https://rseng.github.io/software/api/repos/github/mraveri/tensiometer"}, {"uid": "github/jonzink/EDI_Vetter_unplugged", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI_Vetter_unplugged", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI_Vetter_unplugged"}, {"uid": "github/jonzink/EDI-Vetter", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI-Vetter", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI-Vetter"}, {"uid": "github/jvc2688/K2-CPM", "html_url": "https://rseng.github.io/software/repository/github/jvc2688/K2-CPM", "api_url": "https://rseng.github.io/software/api/repos/github/jvc2688/K2-CPM"}, {"uid": "github/tdrobinson/coronagraph_noise", "html_url": "https://rseng.github.io/software/repository/github/tdrobinson/coronagraph_noise", "api_url": "https://rseng.github.io/software/api/repos/github/tdrobinson/coronagraph_noise"}, {"uid": "github/ywx649999311/EzTao", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/EzTao", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/EzTao"}, {"uid": "github/ywx649999311/vizic", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/vizic", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/vizic"}, {"uid": "github/jeremiah-corrado/fem_2d", "html_url": "https://rseng.github.io/software/repository/github/jeremiah-corrado/fem_2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeremiah-corrado/fem_2d"}, {"uid": "github/Open-ET/flux-data-qaqc", "html_url": "https://rseng.github.io/software/repository/github/Open-ET/flux-data-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/Open-ET/flux-data-qaqc"}, {"uid": "github/weiliu123/PCLassoReg", "html_url": "https://rseng.github.io/software/repository/github/weiliu123/PCLassoReg", "api_url": "https://rseng.github.io/software/api/repos/github/weiliu123/PCLassoReg"}, {"uid": "github/remingtonsexton/BADASS3", "html_url": "https://rseng.github.io/software/repository/github/remingtonsexton/BADASS3", "api_url": "https://rseng.github.io/software/api/repos/github/remingtonsexton/BADASS3"}, {"uid": "github/ProjectPyRhO/PyRhO", "html_url": "https://rseng.github.io/software/repository/github/ProjectPyRhO/PyRhO", "api_url": "https://rseng.github.io/software/api/repos/github/ProjectPyRhO/PyRhO"}, {"uid": "github/csalyk/spectools_ir", "html_url": "https://rseng.github.io/software/repository/github/csalyk/spectools_ir", "api_url": "https://rseng.github.io/software/api/repos/github/csalyk/spectools_ir"}, {"uid": "github/cbroeckl/RAMClustR", "html_url": "https://rseng.github.io/software/repository/github/cbroeckl/RAMClustR", "api_url": "https://rseng.github.io/software/api/repos/github/cbroeckl/RAMClustR"}, {"uid": "github/agorajs/agora-vpsc", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-vpsc", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-vpsc"}, {"uid": "github/agorajs/agora-forbid", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-forbid", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-forbid"}, {"uid": "github/morispi/LRez", "html_url": "https://rseng.github.io/software/repository/github/morispi/LRez", "api_url": "https://rseng.github.io/software/api/repos/github/morispi/LRez"}, {"uid": "github/ericfell/rfbzero", "html_url": "https://rseng.github.io/software/repository/github/ericfell/rfbzero", "api_url": "https://rseng.github.io/software/api/repos/github/ericfell/rfbzero"}, {"uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "html_url": "https://rseng.github.io/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "api_url": "https://rseng.github.io/software/api/repos/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs"}, {"uid": "github/ChristopheBerthod/Piecewise.jl", "html_url": "https://rseng.github.io/software/repository/github/ChristopheBerthod/Piecewise.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopheBerthod/Piecewise.jl"}, {"uid": "github/vmmunoza/nuHawkHunter", "html_url": "https://rseng.github.io/software/repository/github/vmmunoza/nuHawkHunter", "api_url": "https://rseng.github.io/software/api/repos/github/vmmunoza/nuHawkHunter"}, {"uid": "github/davemlz/eemont", "html_url": "https://rseng.github.io/software/repository/github/davemlz/eemont", "api_url": "https://rseng.github.io/software/api/repos/github/davemlz/eemont"}, {"uid": "github/mbillingr/libgdf", "html_url": "https://rseng.github.io/software/repository/github/mbillingr/libgdf", "api_url": "https://rseng.github.io/software/api/repos/github/mbillingr/libgdf"}, {"uid": "github/saigegit/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/saigegit/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/saigegit/SAIGE"}, {"uid": "github/KorfLab/SNAP", "html_url": "https://rseng.github.io/software/repository/github/KorfLab/SNAP", "api_url": "https://rseng.github.io/software/api/repos/github/KorfLab/SNAP"}, {"uid": "github/joachimwolff/Hi-cGAN", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/Hi-cGAN", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/Hi-cGAN"}, {"uid": "github/joachimwolff/hyperparameterScoringHiC", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/hyperparameterScoringHiC", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/hyperparameterScoringHiC"}, {"uid": "github/ekiefl/pooltool", "html_url": "https://rseng.github.io/software/repository/github/ekiefl/pooltool", "api_url": "https://rseng.github.io/software/api/repos/github/ekiefl/pooltool"}, {"uid": "github/msolpera/pyUPMASK", "html_url": "https://rseng.github.io/software/repository/github/msolpera/pyUPMASK", "api_url": "https://rseng.github.io/software/api/repos/github/msolpera/pyUPMASK"}, {"uid": "github/jrenaud90/TidalPy", "html_url": "https://rseng.github.io/software/repository/github/jrenaud90/TidalPy", "api_url": "https://rseng.github.io/software/api/repos/github/jrenaud90/TidalPy"}, {"uid": "github/ferdymercury/amide", "html_url": "https://rseng.github.io/software/repository/github/ferdymercury/amide", "api_url": "https://rseng.github.io/software/api/repos/github/ferdymercury/amide"}, {"uid": "github/vipinagrawal25/MeMC", "html_url": "https://rseng.github.io/software/repository/github/vipinagrawal25/MeMC", "api_url": "https://rseng.github.io/software/api/repos/github/vipinagrawal25/MeMC"}, {"uid": "github/orbisgis/lczexplore", "html_url": "https://rseng.github.io/software/repository/github/orbisgis/lczexplore", "api_url": "https://rseng.github.io/software/api/repos/github/orbisgis/lczexplore"}, {"uid": "github/spectrapepper/spectrapepper", "html_url": "https://rseng.github.io/software/repository/github/spectrapepper/spectrapepper", "api_url": "https://rseng.github.io/software/api/repos/github/spectrapepper/spectrapepper"}, {"uid": "github/sanjibs/bmcmc", "html_url": "https://rseng.github.io/software/repository/github/sanjibs/bmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/sanjibs/bmcmc"}, {"uid": "github/mostanes/umbrella2", "html_url": "https://rseng.github.io/software/repository/github/mostanes/umbrella2", "api_url": "https://rseng.github.io/software/api/repos/github/mostanes/umbrella2"}, {"uid": "github/panoptes-organization/panoptes", "html_url": "https://rseng.github.io/software/repository/github/panoptes-organization/panoptes", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes-organization/panoptes"}, {"uid": "github/jnktsj/DNApi", "html_url": "https://rseng.github.io/software/repository/github/jnktsj/DNApi", "api_url": "https://rseng.github.io/software/api/repos/github/jnktsj/DNApi"}, {"uid": "github/finagle29/DBSP_DRP", "html_url": "https://rseng.github.io/software/repository/github/finagle29/DBSP_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/finagle29/DBSP_DRP"}, {"uid": "github/astroML/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroML/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroML/gatspy"}, {"uid": "github/mtsch/Ripserer.jl", "html_url": "https://rseng.github.io/software/repository/github/mtsch/Ripserer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mtsch/Ripserer.jl"}, {"uid": "github/PASTAQ-MS/PASTAQ", "html_url": "https://rseng.github.io/software/repository/github/PASTAQ-MS/PASTAQ", "api_url": "https://rseng.github.io/software/api/repos/github/PASTAQ-MS/PASTAQ"}, {"uid": "github/zhoux85/scAdapt", "html_url": "https://rseng.github.io/software/repository/github/zhoux85/scAdapt", "api_url": "https://rseng.github.io/software/api/repos/github/zhoux85/scAdapt"}, {"uid": "github/t-brandt/acorns-adi", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/acorns-adi", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/acorns-adi"}, {"uid": "github/t-brandt/fitramp", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/fitramp", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/fitramp"}, {"uid": "github/t-brandt/orvara", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/orvara", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/orvara"}, {"uid": "github/wathela/FIRST-CLASSIFIER", "html_url": "https://rseng.github.io/software/repository/github/wathela/FIRST-CLASSIFIER", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/FIRST-CLASSIFIER"}, {"uid": "github/wathela/PyMerger", "html_url": "https://rseng.github.io/software/repository/github/wathela/PyMerger", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/PyMerger"}, {"uid": "github/zonca/dst", "html_url": "https://rseng.github.io/software/repository/github/zonca/dst", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/dst"}, {"uid": "github/zonca/python-qucs", "html_url": "https://rseng.github.io/software/repository/github/zonca/python-qucs", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/python-qucs"}, {"uid": "github/tcherninceline/PPInteractions", "html_url": "https://rseng.github.io/software/repository/github/tcherninceline/PPInteractions", "api_url": "https://rseng.github.io/software/api/repos/github/tcherninceline/PPInteractions"}, {"uid": "github/Stuermer/EchelleSimulator", "html_url": "https://rseng.github.io/software/repository/github/Stuermer/EchelleSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/Stuermer/EchelleSimulator"}, {"uid": "github/grahambell/pymoc", "html_url": "https://rseng.github.io/software/repository/github/grahambell/pymoc", "api_url": "https://rseng.github.io/software/api/repos/github/grahambell/pymoc"}, {"uid": "github/jolie/tquery", "html_url": "https://rseng.github.io/software/repository/github/jolie/tquery", "api_url": "https://rseng.github.io/software/api/repos/github/jolie/tquery"}, {"uid": "github/vdemichev/DiaNN", "html_url": "https://rseng.github.io/software/repository/github/vdemichev/DiaNN", "api_url": "https://rseng.github.io/software/api/repos/github/vdemichev/DiaNN"}, {"uid": "github/KonstantinLeyde/light", "html_url": "https://rseng.github.io/software/repository/github/KonstantinLeyde/light", "api_url": "https://rseng.github.io/software/api/repos/github/KonstantinLeyde/light"}, {"uid": "github/vle-prtc/rbef-prtc", "html_url": "https://rseng.github.io/software/repository/github/vle-prtc/rbef-prtc", "api_url": "https://rseng.github.io/software/api/repos/github/vle-prtc/rbef-prtc"}, {"uid": "github/indralab/pybiopax", "html_url": "https://rseng.github.io/software/repository/github/indralab/pybiopax", "api_url": "https://rseng.github.io/software/api/repos/github/indralab/pybiopax"}, {"uid": "github/LeandroOrdonez/explora-vr-dash-client", "html_url": "https://rseng.github.io/software/repository/github/LeandroOrdonez/explora-vr-dash-client", "api_url": "https://rseng.github.io/software/api/repos/github/LeandroOrdonez/explora-vr-dash-client"}, {"uid": "github/pangeo-data/climpred", "html_url": "https://rseng.github.io/software/repository/github/pangeo-data/climpred", "api_url": "https://rseng.github.io/software/api/repos/github/pangeo-data/climpred"}, {"uid": "github/tomoyukif/MCPtaggR", "html_url": "https://rseng.github.io/software/repository/github/tomoyukif/MCPtaggR", "api_url": "https://rseng.github.io/software/api/repos/github/tomoyukif/MCPtaggR"}, {"uid": "github/JiangFangzhou/SIDM", "html_url": "https://rseng.github.io/software/repository/github/JiangFangzhou/SIDM", "api_url": "https://rseng.github.io/software/api/repos/github/JiangFangzhou/SIDM"}, {"uid": "github/jo276/EvapMass", "html_url": "https://rseng.github.io/software/repository/github/jo276/EvapMass", "api_url": "https://rseng.github.io/software/api/repos/github/jo276/EvapMass"}, {"uid": "github/brandonckelly/carma_pack", "html_url": "https://rseng.github.io/software/repository/github/brandonckelly/carma_pack", "api_url": "https://rseng.github.io/software/api/repos/github/brandonckelly/carma_pack"}, {"uid": "github/lastz/lastz", "html_url": "https://rseng.github.io/software/repository/github/lastz/lastz", "api_url": "https://rseng.github.io/software/api/repos/github/lastz/lastz"}, {"uid": "github/mathopt/DynamicOED.jl", "html_url": "https://rseng.github.io/software/repository/github/mathopt/DynamicOED.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mathopt/DynamicOED.jl"}, {"uid": "github/Libensemble/libensemble", "html_url": "https://rseng.github.io/software/repository/github/Libensemble/libensemble", "api_url": "https://rseng.github.io/software/api/repos/github/Libensemble/libensemble"}, {"uid": "github/HorvathLab/ReQTL", "html_url": "https://rseng.github.io/software/repository/github/HorvathLab/ReQTL", "api_url": "https://rseng.github.io/software/api/repos/github/HorvathLab/ReQTL"}, {"uid": "github/kinnala/scikit-fem", "html_url": "https://rseng.github.io/software/repository/github/kinnala/scikit-fem", "api_url": "https://rseng.github.io/software/api/repos/github/kinnala/scikit-fem"}, {"uid": "github/INRS-France/predicting_alarm_audibility", "html_url": "https://rseng.github.io/software/repository/github/INRS-France/predicting_alarm_audibility", "api_url": "https://rseng.github.io/software/api/repos/github/INRS-France/predicting_alarm_audibility"}, {"uid": "github/mdruett/COCOPLOT", "html_url": "https://rseng.github.io/software/repository/github/mdruett/COCOPLOT", "api_url": "https://rseng.github.io/software/api/repos/github/mdruett/COCOPLOT"}, {"uid": "github/ebmonson/2DFFTUtils-Module", "html_url": "https://rseng.github.io/software/repository/github/ebmonson/2DFFTUtils-Module", "api_url": "https://rseng.github.io/software/api/repos/github/ebmonson/2DFFTUtils-Module"}, {"uid": "github/BGI-Qingdao/TGS-GapCloser", "html_url": "https://rseng.github.io/software/repository/github/BGI-Qingdao/TGS-GapCloser", "api_url": "https://rseng.github.io/software/api/repos/github/BGI-Qingdao/TGS-GapCloser"}, {"uid": "github/giuspugl/picasso", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/picasso"}, {"uid": "github/giuspugl/MCMole3D", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/MCMole3D", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/MCMole3D"}, {"uid": "github/giuspugl/COnet", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/COnet", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/COnet"}, {"uid": "github/giuspugl/fgcluster", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/fgcluster", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/fgcluster"}, {"uid": "github/ElectionDataAnalysis/electiondata", "html_url": "https://rseng.github.io/software/repository/github/ElectionDataAnalysis/electiondata", "api_url": "https://rseng.github.io/software/api/repos/github/ElectionDataAnalysis/electiondata"}, {"uid": "github/mary77/scQcut", "html_url": "https://rseng.github.io/software/repository/github/mary77/scQcut", "api_url": "https://rseng.github.io/software/api/repos/github/mary77/scQcut"}, {"uid": "github/PopMedNet-Team/popmednet", "html_url": "https://rseng.github.io/software/repository/github/PopMedNet-Team/popmednet", "api_url": "https://rseng.github.io/software/api/repos/github/PopMedNet-Team/popmednet"}, {"uid": "github/ICSC-Spoke3/NP_TMcode", "html_url": "https://rseng.github.io/software/repository/github/ICSC-Spoke3/NP_TMcode", "api_url": "https://rseng.github.io/software/api/repos/github/ICSC-Spoke3/NP_TMcode"}, {"uid": "github/raphael-group/chisel", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/chisel", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/chisel"}, {"uid": "github/raphael-group/hatchet", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/hatchet", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/hatchet"}, {"uid": "github/gabraham/flashpca", "html_url": "https://rseng.github.io/software/repository/github/gabraham/flashpca", "api_url": "https://rseng.github.io/software/api/repos/github/gabraham/flashpca"}, {"uid": "github/statOmics/satuRnPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/satuRnPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/satuRnPaper"}, {"uid": "github/statOmics/tradeSeqPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/tradeSeqPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/tradeSeqPaper"}, {"uid": "github/GeoscienceAustralia/eo-tides", "html_url": "https://rseng.github.io/software/repository/github/GeoscienceAustralia/eo-tides", "api_url": "https://rseng.github.io/software/api/repos/github/GeoscienceAustralia/eo-tides"}, {"uid": "github/MonashSmartStructures/ospgrillage", "html_url": "https://rseng.github.io/software/repository/github/MonashSmartStructures/ospgrillage", "api_url": "https://rseng.github.io/software/api/repos/github/MonashSmartStructures/ospgrillage"}, {"uid": "github/wdecoster/nanoQC", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoQC", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoQC"}, {"uid": "github/wdecoster/nano-snakemake", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nano-snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nano-snakemake"}, {"uid": "github/wdecoster/NanoComp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoComp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoComp"}, {"uid": "github/wdecoster/nanocomp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanocomp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanocomp"}, {"uid": "github/wdecoster/nanomath", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanomath", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanomath"}, {"uid": "github/wdecoster/nanopack", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanopack", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanopack"}, {"uid": "github/wdecoster/nanostat", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanostat", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanostat"}, {"uid": "github/wdecoster/nanolyse", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanolyse", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanolyse"}, {"uid": "github/wdecoster/nanofilt", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanofilt", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanofilt"}, {"uid": "github/wdecoster/NanoPlot", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoPlot", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoPlot"}, {"uid": "github/wdecoster/nanoget", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoget", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoget"}, {"uid": "github/wdecoster/chopper", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/chopper", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/chopper"}, {"uid": "github/Patrick-Cole/pygmi", "html_url": "https://rseng.github.io/software/repository/github/Patrick-Cole/pygmi", "api_url": "https://rseng.github.io/software/api/repos/github/Patrick-Cole/pygmi"}, {"uid": "github/scverse/scanpy", "html_url": "https://rseng.github.io/software/repository/github/scverse/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/scanpy"}, {"uid": "github/scverse/muon", "html_url": "https://rseng.github.io/software/repository/github/scverse/muon", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/muon"}, {"uid": "github/scverse/anndata", "html_url": "https://rseng.github.io/software/repository/github/scverse/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/anndata"}, {"uid": "github/EliseJ/astroABC", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/astroABC", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/astroABC"}, {"uid": "github/EliseJ/superabc", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/superabc", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/superabc"}, {"uid": "github/legacysurvey/unwise_psf", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/unwise_psf", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/unwise_psf"}, {"uid": "github/legacysurvey/legacypipe", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/legacypipe", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/legacypipe"}, {"uid": "github/basp-group/purify", "html_url": "https://rseng.github.io/software/repository/github/basp-group/purify", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/purify"}, {"uid": "github/basp-group/Puri-Psi", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Puri-Psi", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Puri-Psi"}, {"uid": "github/basp-group/R2D2-RI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-RI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-RI"}, {"uid": "github/basp-group/faceted-hypersara", "html_url": "https://rseng.github.io/software/repository/github/basp-group/faceted-hypersara", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/faceted-hypersara"}, {"uid": "github/basp-group/SARA-PPD", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-PPD", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-PPD"}, {"uid": "github/basp-group/BUQO", "html_url": "https://rseng.github.io/software/repository/github/basp-group/BUQO", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/BUQO"}, {"uid": "github/basp-group/AIRI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/AIRI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/AIRI"}, {"uid": "github/basp-group/R2D2-SII", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-SII", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-SII"}, {"uid": "github/basp-group/sopt", "html_url": "https://rseng.github.io/software/repository/github/basp-group/sopt", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/sopt"}, {"uid": "github/basp-group/Optical-Interferometry-Trilinear", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Optical-Interferometry-Trilinear", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Optical-Interferometry-Trilinear"}, {"uid": "github/basp-group/SARA-dimensionality-reduction", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-dimensionality-reduction", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-dimensionality-reduction"}, {"uid": "github/sahasuparna/DeMoS", "html_url": "https://rseng.github.io/software/repository/github/sahasuparna/DeMoS", "api_url": "https://rseng.github.io/software/api/repos/github/sahasuparna/DeMoS"}, {"uid": "github/CLARIAH/grlc", "html_url": "https://rseng.github.io/software/repository/github/CLARIAH/grlc", "api_url": "https://rseng.github.io/software/api/repos/github/CLARIAH/grlc"}, {"uid": "github/Higgins00/TESS-Localize", "html_url": "https://rseng.github.io/software/repository/github/Higgins00/TESS-Localize", "api_url": "https://rseng.github.io/software/api/repos/github/Higgins00/TESS-Localize"}, {"uid": "github/peterspackman/occ", "html_url": "https://rseng.github.io/software/repository/github/peterspackman/occ", "api_url": "https://rseng.github.io/software/api/repos/github/peterspackman/occ"}, {"uid": "github/LLNL/popclass", "html_url": "https://rseng.github.io/software/repository/github/LLNL/popclass", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/popclass"}, {"uid": "github/LLNL/SSAPy", "html_url": "https://rseng.github.io/software/repository/github/LLNL/SSAPy", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/SSAPy"}, {"uid": "github/LLNL/echemfem", "html_url": "https://rseng.github.io/software/repository/github/LLNL/echemfem", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/echemfem"}, {"uid": "github/cholla-hydro/cholla", "html_url": "https://rseng.github.io/software/repository/github/cholla-hydro/cholla", "api_url": "https://rseng.github.io/software/api/repos/github/cholla-hydro/cholla"}, {"uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", "html_url": "https://rseng.github.io/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", "api_url": "https://rseng.github.io/software/api/repos/github/joergbuchwald/joss_ogs6py_VTUinterface"}, {"uid": "github/debian-tex/texlive-nonbin", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/texlive-nonbin", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/texlive-nonbin"}, {"uid": "github/debian-tex/biber", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/biber", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/biber"}, {"uid": "github/Alymantara/pydoppler", "html_url": "https://rseng.github.io/software/repository/github/Alymantara/pydoppler", "api_url": "https://rseng.github.io/software/api/repos/github/Alymantara/pydoppler"}, {"uid": "github/MOSAICS-NIH/MOSAICS", "html_url": "https://rseng.github.io/software/repository/github/MOSAICS-NIH/MOSAICS", "api_url": "https://rseng.github.io/software/api/repos/github/MOSAICS-NIH/MOSAICS"}, {"uid": "github/hendr1km/dropout", "html_url": "https://rseng.github.io/software/repository/github/hendr1km/dropout", "api_url": "https://rseng.github.io/software/api/repos/github/hendr1km/dropout"}, {"uid": "github/coolneighbors/unwise-verse", "html_url": "https://rseng.github.io/software/repository/github/coolneighbors/unwise-verse", "api_url": "https://rseng.github.io/software/api/repos/github/coolneighbors/unwise-verse"}, {"uid": "github/mj-will/nessai", "html_url": "https://rseng.github.io/software/repository/github/mj-will/nessai", "api_url": "https://rseng.github.io/software/api/repos/github/mj-will/nessai"}, {"uid": "github/ruta-k/uGMRT-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ruta-k/uGMRT-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ruta-k/uGMRT-pipeline"}, {"uid": "github/mateidavid/nanocall", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/nanocall", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/nanocall"}, {"uid": "github/mateidavid/fast5", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/fast5", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/fast5"}, {"uid": "github/dazhwu/pydynpd", "html_url": "https://rseng.github.io/software/repository/github/dazhwu/pydynpd", "api_url": "https://rseng.github.io/software/api/repos/github/dazhwu/pydynpd"}, {"uid": "github/deepskies/DeepBench", "html_url": "https://rseng.github.io/software/repository/github/deepskies/DeepBench", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/DeepBench"}, {"uid": "github/deepskies/deeplenstronomy", "html_url": "https://rseng.github.io/software/repository/github/deepskies/deeplenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/deeplenstronomy"}, {"uid": "github/sevenstarknight/VariableStarAnalysis", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/VariableStarAnalysis", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/VariableStarAnalysis"}, {"uid": "github/sevenstarknight/OCDetector", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/OCDetector", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/OCDetector"}, {"uid": "github/sevenstarknight/SSMM", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/SSMM", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/SSMM"}, {"uid": "github/sevenstarknight/LINEARSupervisedClassification", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/LINEARSupervisedClassification", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/LINEARSupervisedClassification"}, {"uid": "github/AlmaasLab/csdR", "html_url": "https://rseng.github.io/software/repository/github/AlmaasLab/csdR", "api_url": "https://rseng.github.io/software/api/repos/github/AlmaasLab/csdR"}, {"uid": "github/JuliaHEP/UnROOT.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHEP/UnROOT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHEP/UnROOT.jl"}, {"uid": "github/minaskar/zeus", "html_url": "https://rseng.github.io/software/repository/github/minaskar/zeus", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/zeus"}, {"uid": "github/minaskar/pocomc", "html_url": "https://rseng.github.io/software/repository/github/minaskar/pocomc", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/pocomc"}, {"uid": "github/minaskar/hankl", "html_url": "https://rseng.github.io/software/repository/github/minaskar/hankl", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/hankl"}, {"uid": "github/annayqho/TheCannon", "html_url": "https://rseng.github.io/software/repository/github/annayqho/TheCannon", "api_url": "https://rseng.github.io/software/api/repos/github/annayqho/TheCannon"}, {"uid": "github/jonbmartin/pulpy", "html_url": "https://rseng.github.io/software/repository/github/jonbmartin/pulpy", "api_url": "https://rseng.github.io/software/api/repos/github/jonbmartin/pulpy"}, {"uid": "github/gdalle/HiddenMarkovModels.jl", "html_url": "https://rseng.github.io/software/repository/github/gdalle/HiddenMarkovModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gdalle/HiddenMarkovModels.jl"}, {"uid": "github/SarveshVGharat/Plages-Identification", "html_url": "https://rseng.github.io/software/repository/github/SarveshVGharat/Plages-Identification", "api_url": "https://rseng.github.io/software/api/repos/github/SarveshVGharat/Plages-Identification"}, {"uid": "github/auranic/ClinTrajan", "html_url": "https://rseng.github.io/software/repository/github/auranic/ClinTrajan", "api_url": "https://rseng.github.io/software/api/repos/github/auranic/ClinTrajan"}, {"uid": "github/patrickfuchs/buildH", "html_url": "https://rseng.github.io/software/repository/github/patrickfuchs/buildH", "api_url": "https://rseng.github.io/software/api/repos/github/patrickfuchs/buildH"}, {"uid": "github/marius311/cosmoslik", "html_url": "https://rseng.github.io/software/repository/github/marius311/cosmoslik", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/cosmoslik"}, {"uid": "github/marius311/pypico", "html_url": "https://rseng.github.io/software/repository/github/marius311/pypico", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/pypico"}, {"uid": "github/mdshw5/pyfaidx", "html_url": "https://rseng.github.io/software/repository/github/mdshw5/pyfaidx", "api_url": "https://rseng.github.io/software/api/repos/github/mdshw5/pyfaidx"}, {"uid": "github/horovod/horovod", "html_url": "https://rseng.github.io/software/repository/github/horovod/horovod", "api_url": "https://rseng.github.io/software/api/repos/github/horovod/horovod"}, {"uid": "github/justinmathias/isocalcR", "html_url": "https://rseng.github.io/software/repository/github/justinmathias/isocalcR", "api_url": "https://rseng.github.io/software/api/repos/github/justinmathias/isocalcR"}, {"uid": "github/dipangwvu/SPEGID", "html_url": "https://rseng.github.io/software/repository/github/dipangwvu/SPEGID", "api_url": "https://rseng.github.io/software/api/repos/github/dipangwvu/SPEGID"}, {"uid": "github/ylab-hi/ScanITD", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanITD", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanITD"}, {"uid": "github/ylab-hi/ScanExitronLR", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanExitronLR", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanExitronLR"}, {"uid": "github/sntioudis/papreca", "html_url": "https://rseng.github.io/software/repository/github/sntioudis/papreca", "api_url": "https://rseng.github.io/software/api/repos/github/sntioudis/papreca"}, {"uid": "github/lydialucchesi/Vizumap", "html_url": "https://rseng.github.io/software/repository/github/lydialucchesi/Vizumap", "api_url": "https://rseng.github.io/software/api/repos/github/lydialucchesi/Vizumap"}, {"uid": "github/lukapecnik/NiaAML", "html_url": "https://rseng.github.io/software/repository/github/lukapecnik/NiaAML", "api_url": "https://rseng.github.io/software/api/repos/github/lukapecnik/NiaAML"}, {"uid": "github/rvandewater/ReciPies", "html_url": "https://rseng.github.io/software/repository/github/rvandewater/ReciPies", "api_url": "https://rseng.github.io/software/api/repos/github/rvandewater/ReciPies"}, {"uid": "github/flemingtonlab/SpliceV", "html_url": "https://rseng.github.io/software/repository/github/flemingtonlab/SpliceV", "api_url": "https://rseng.github.io/software/api/repos/github/flemingtonlab/SpliceV"}, {"uid": "github/rhpvorderman/sequali", "html_url": "https://rseng.github.io/software/repository/github/rhpvorderman/sequali", "api_url": "https://rseng.github.io/software/api/repos/github/rhpvorderman/sequali"}, {"uid": "github/keflavich/HiGal_SEDfitter", "html_url": "https://rseng.github.io/software/repository/github/keflavich/HiGal_SEDfitter", "api_url": "https://rseng.github.io/software/api/repos/github/keflavich/HiGal_SEDfitter"}, {"uid": "github/gogrean/PyXel", "html_url": "https://rseng.github.io/software/repository/github/gogrean/PyXel", "api_url": "https://rseng.github.io/software/api/repos/github/gogrean/PyXel"}, {"uid": "github/zdelrosario/py_grama", "html_url": "https://rseng.github.io/software/repository/github/zdelrosario/py_grama", "api_url": "https://rseng.github.io/software/api/repos/github/zdelrosario/py_grama"}, {"uid": "github/FourierFlows/GeophysicalFlows.jl", "html_url": "https://rseng.github.io/software/repository/github/FourierFlows/GeophysicalFlows.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FourierFlows/GeophysicalFlows.jl"}, {"uid": "github/cheerfuluser/tessreduce", "html_url": "https://rseng.github.io/software/repository/github/cheerfuluser/tessreduce", "api_url": "https://rseng.github.io/software/api/repos/github/cheerfuluser/tessreduce"}, {"uid": "github/fbartolic/volcano", "html_url": "https://rseng.github.io/software/repository/github/fbartolic/volcano", "api_url": "https://rseng.github.io/software/api/repos/github/fbartolic/volcano"}, {"uid": "github/jw-lin/lightbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/lightbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/lightbeam"}, {"uid": "github/jw-lin/cbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/cbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/cbeam"}, {"uid": "github/technic960183/spherimatch", "html_url": "https://rseng.github.io/software/repository/github/technic960183/spherimatch", "api_url": "https://rseng.github.io/software/api/repos/github/technic960183/spherimatch"}, {"uid": "github/ByrumLab/proteoDA", "html_url": "https://rseng.github.io/software/repository/github/ByrumLab/proteoDA", "api_url": "https://rseng.github.io/software/api/repos/github/ByrumLab/proteoDA"}, {"uid": "github/VNNikolaidis/nnlib2Rcpp", "html_url": "https://rseng.github.io/software/repository/github/VNNikolaidis/nnlib2Rcpp", "api_url": "https://rseng.github.io/software/api/repos/github/VNNikolaidis/nnlib2Rcpp"}, {"uid": "github/swiss-seismological-service/DUGseis", "html_url": "https://rseng.github.io/software/repository/github/swiss-seismological-service/DUGseis", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-seismological-service/DUGseis"}, {"uid": "github/arcaldwell49/SimplyAgree", "html_url": "https://rseng.github.io/software/repository/github/arcaldwell49/SimplyAgree", "api_url": "https://rseng.github.io/software/api/repos/github/arcaldwell49/SimplyAgree"}, {"uid": "github/morpheus-project/morpheus", "html_url": "https://rseng.github.io/software/repository/github/morpheus-project/morpheus", "api_url": "https://rseng.github.io/software/api/repos/github/morpheus-project/morpheus"}, {"uid": "github/MultiQC/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/MultiQC/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/MultiQC/MultiQC"}, {"uid": "github/biswajitmb/DarpanX", "html_url": "https://rseng.github.io/software/repository/github/biswajitmb/DarpanX", "api_url": "https://rseng.github.io/software/api/repos/github/biswajitmb/DarpanX"}, {"uid": "github/hauselin/ollama-r", "html_url": "https://rseng.github.io/software/repository/github/hauselin/ollama-r", "api_url": "https://rseng.github.io/software/api/repos/github/hauselin/ollama-r"}, {"uid": "github/phipsonlab/propeller-paper-analysis", "html_url": "https://rseng.github.io/software/repository/github/phipsonlab/propeller-paper-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phipsonlab/propeller-paper-analysis"}, {"uid": "github/PabloVD/CosmoGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/CosmoGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/CosmoGraphNet"}, {"uid": "github/PabloVD/HaloGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HaloGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HaloGraphNet"}, {"uid": "github/PabloVD/21cmDeepLearning", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/21cmDeepLearning", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/21cmDeepLearning"}, {"uid": "github/PabloVD/HAYASHI", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HAYASHI", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HAYASHI"}, {"uid": "github/galaxyproject/ansible-tiaas2", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/ansible-tiaas2", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/ansible-tiaas2"}, {"uid": "github/galaxyproject/galaxy-lib", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/galaxy-lib", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/galaxy-lib"}, {"uid": "github/mzechmeister/viper", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/viper", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/viper"}, {"uid": "github/mzechmeister/serval", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/serval", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/serval"}, {"uid": "github/gridap/GridapSolvers.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/GridapSolvers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/GridapSolvers.jl"}, {"uid": "github/gridap/Gridap.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/Gridap.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/Gridap.jl"}, {"uid": "github/GeoArkadeep/Stresslog", "html_url": "https://rseng.github.io/software/repository/github/GeoArkadeep/Stresslog", "api_url": "https://rseng.github.io/software/api/repos/github/GeoArkadeep/Stresslog"}, {"uid": "github/HAWinther/FML", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/FML", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/FML"}, {"uid": "github/HAWinther/MG-PICOLA-PUBLIC", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/MG-PICOLA-PUBLIC"}, {"uid": "github/robin-janssen/CODES-Benchmark", "html_url": "https://rseng.github.io/software/repository/github/robin-janssen/CODES-Benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/robin-janssen/CODES-Benchmark"}, {"uid": "github/MichielCottaar/velbin", "html_url": "https://rseng.github.io/software/repository/github/MichielCottaar/velbin", "api_url": "https://rseng.github.io/software/api/repos/github/MichielCottaar/velbin"}, {"uid": "github/jcibanezm/DustCharge", "html_url": "https://rseng.github.io/software/repository/github/jcibanezm/DustCharge", "api_url": "https://rseng.github.io/software/api/repos/github/jcibanezm/DustCharge"}, {"uid": "github/arq5x/poretools", "html_url": "https://rseng.github.io/software/repository/github/arq5x/poretools", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/poretools"}, {"uid": "github/arq5x/bedtools2", "html_url": "https://rseng.github.io/software/repository/github/arq5x/bedtools2", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/bedtools2"}, {"uid": "github/arq5x/lumpy-sv", "html_url": "https://rseng.github.io/software/repository/github/arq5x/lumpy-sv", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/lumpy-sv"}, {"uid": "github/arq5x/grabix", "html_url": "https://rseng.github.io/software/repository/github/arq5x/grabix", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/grabix"}, {"uid": "github/sib-swiss/pftools3", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/pftools3", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/pftools3"}, {"uid": "github/sib-swiss/glittr", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/glittr", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/glittr"}, {"uid": "github/Brauckhoff/biopixR", "html_url": "https://rseng.github.io/software/repository/github/Brauckhoff/biopixR", "api_url": "https://rseng.github.io/software/api/repos/github/Brauckhoff/biopixR"}, {"uid": "github/saphir746/BiobankRead-Bash", "html_url": "https://rseng.github.io/software/repository/github/saphir746/BiobankRead-Bash", "api_url": "https://rseng.github.io/software/api/repos/github/saphir746/BiobankRead-Bash"}, {"uid": "github/combustiontoolbox/combustion_toolbox", "html_url": "https://rseng.github.io/software/repository/github/combustiontoolbox/combustion_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/combustiontoolbox/combustion_toolbox"}, {"uid": "github/pyroll-project/pyroll-core", "html_url": "https://rseng.github.io/software/repository/github/pyroll-project/pyroll-core", "api_url": "https://rseng.github.io/software/api/repos/github/pyroll-project/pyroll-core"}, {"uid": "github/exciting/excitingtools", "html_url": "https://rseng.github.io/software/repository/github/exciting/excitingtools", "api_url": "https://rseng.github.io/software/api/repos/github/exciting/excitingtools"}, {"uid": "github/BU-hammerTeam/PyHammer", "html_url": "https://rseng.github.io/software/repository/github/BU-hammerTeam/PyHammer", "api_url": "https://rseng.github.io/software/api/repos/github/BU-hammerTeam/PyHammer"}, {"uid": "github/geodynamics/Rayleigh", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/Rayleigh", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/Rayleigh"}, {"uid": "github/geodynamics/burnman", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/burnman", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/burnman"}, {"uid": "github/cbielow/PTXQC", "html_url": "https://rseng.github.io/software/repository/github/cbielow/PTXQC", "api_url": "https://rseng.github.io/software/api/repos/github/cbielow/PTXQC"}, {"uid": "github/lskatz/fasten", "html_url": "https://rseng.github.io/software/repository/github/lskatz/fasten", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/fasten"}, {"uid": "github/lskatz/SneakerNet", "html_url": "https://rseng.github.io/software/repository/github/lskatz/SneakerNet", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/SneakerNet"}, {"uid": "github/myinxd/mcrgnet", "html_url": "https://rseng.github.io/software/repository/github/myinxd/mcrgnet", "api_url": "https://rseng.github.io/software/api/repos/github/myinxd/mcrgnet"}, {"uid": "github/hyriver/hysetter", "html_url": "https://rseng.github.io/software/repository/github/hyriver/hysetter", "api_url": "https://rseng.github.io/software/api/repos/github/hyriver/hysetter"}, {"uid": "github/Filter-Bubble/e2e-Dutch", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/e2e-Dutch", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/e2e-Dutch"}, {"uid": "github/Filter-Bubble/stroll", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/stroll", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/stroll"}, {"uid": "github/mwanakijiji/rrlfe", "html_url": "https://rseng.github.io/software/repository/github/mwanakijiji/rrlfe", "api_url": "https://rseng.github.io/software/api/repos/github/mwanakijiji/rrlfe"}, {"uid": "github/hugoledoux/startinpy", "html_url": "https://rseng.github.io/software/repository/github/hugoledoux/startinpy", "api_url": "https://rseng.github.io/software/api/repos/github/hugoledoux/startinpy"}, {"uid": "github/GOBLIN-Proj/goblin_lite", "html_url": "https://rseng.github.io/software/repository/github/GOBLIN-Proj/goblin_lite", "api_url": "https://rseng.github.io/software/api/repos/github/GOBLIN-Proj/goblin_lite"}, {"uid": "github/sethspjohnso/satmc", "html_url": "https://rseng.github.io/software/repository/github/sethspjohnso/satmc", "api_url": "https://rseng.github.io/software/api/repos/github/sethspjohnso/satmc"}, {"uid": "github/daniloceano/LorenzCycleToolkit", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/LorenzCycleToolkit", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/LorenzCycleToolkit"}, {"uid": "github/daniloceano/CycloPhaser", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/CycloPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/CycloPhaser"}, {"uid": "github/era-urban/wrfpy", "html_url": "https://rseng.github.io/software/repository/github/era-urban/wrfpy", "api_url": "https://rseng.github.io/software/api/repos/github/era-urban/wrfpy"}, {"uid": "github/smithlabcode/dnmtools", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/dnmtools", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/dnmtools"}, {"uid": "github/smithlabcode/falco", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/falco", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/falco"}, {"uid": "github/smithlabcode/preseq", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/preseq", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/preseq"}, {"uid": "github/smithlabcode/abismal", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/abismal", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/abismal"}, {"uid": "github/csbioinfopk/iSumoK-PseAAC", "html_url": "https://rseng.github.io/software/repository/github/csbioinfopk/iSumoK-PseAAC", "api_url": "https://rseng.github.io/software/api/repos/github/csbioinfopk/iSumoK-PseAAC"}, {"uid": "github/ashleyblawas/respdetect", "html_url": "https://rseng.github.io/software/repository/github/ashleyblawas/respdetect", "api_url": "https://rseng.github.io/software/api/repos/github/ashleyblawas/respdetect"}, {"uid": "github/NKI-AI/direct", "html_url": "https://rseng.github.io/software/repository/github/NKI-AI/direct", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-AI/direct"}, {"uid": "github/sPaMFouR/RedPipe", "html_url": "https://rseng.github.io/software/repository/github/sPaMFouR/RedPipe", "api_url": "https://rseng.github.io/software/api/repos/github/sPaMFouR/RedPipe"}, {"uid": "github/VMBoehm/MADLens", "html_url": "https://rseng.github.io/software/repository/github/VMBoehm/MADLens", "api_url": "https://rseng.github.io/software/api/repos/github/VMBoehm/MADLens"}, {"uid": "github/tobiasrausch/alfred", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/alfred", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/alfred"}, {"uid": "github/tobiasrausch/wally", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/wally", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/wally"}, {"uid": "github/tobiasrausch/lorax", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/lorax", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/lorax"}, {"uid": "github/JulianKarlBauer/mechkit", "html_url": "https://rseng.github.io/software/repository/github/JulianKarlBauer/mechkit", "api_url": "https://rseng.github.io/software/api/repos/github/JulianKarlBauer/mechkit"}, {"uid": "github/ImproPhoto/pymicmac", "html_url": "https://rseng.github.io/software/repository/github/ImproPhoto/pymicmac", "api_url": "https://rseng.github.io/software/api/repos/github/ImproPhoto/pymicmac"}, {"uid": "github/MikeHeiber/Excimontec", "html_url": "https://rseng.github.io/software/repository/github/MikeHeiber/Excimontec", "api_url": "https://rseng.github.io/software/api/repos/github/MikeHeiber/Excimontec"}, {"uid": "github/anmolter/XLUR", "html_url": "https://rseng.github.io/software/repository/github/anmolter/XLUR", "api_url": "https://rseng.github.io/software/api/repos/github/anmolter/XLUR"}, {"uid": "github/poldracklab/mriqc", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/mriqc", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/mriqc"}, {"uid": "github/poldracklab/nitransforms", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/nitransforms", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/nitransforms"}, {"uid": "github/miniufo/xinvert", "html_url": "https://rseng.github.io/software/repository/github/miniufo/xinvert", "api_url": "https://rseng.github.io/software/api/repos/github/miniufo/xinvert"}, {"uid": "github/cwru-pat/cosmograph", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cosmograph", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cosmograph"}, {"uid": "github/cwru-pat/cmb-multipole_vectors", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cmb-multipole_vectors", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cmb-multipole_vectors"}, {"uid": "github/DOnghiaGroup/MGwave", "html_url": "https://rseng.github.io/software/repository/github/DOnghiaGroup/MGwave", "api_url": "https://rseng.github.io/software/api/repos/github/DOnghiaGroup/MGwave"}, {"uid": "github/seeh/surprise", "html_url": "https://rseng.github.io/software/repository/github/seeh/surprise", "api_url": "https://rseng.github.io/software/api/repos/github/seeh/surprise"}, {"uid": "github/openmm/openmm", "html_url": "https://rseng.github.io/software/repository/github/openmm/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/openmm/openmm"}, {"uid": "github/pinellolab/STREAM", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/STREAM", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/STREAM"}, {"uid": "github/pinellolab/CRISPRitz", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPRitz", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPRitz"}, {"uid": "github/pinellolab/CRISPResso2", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPResso2", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPResso2"}, {"uid": "github/stefanradev93/BayesFlow", "html_url": "https://rseng.github.io/software/repository/github/stefanradev93/BayesFlow", "api_url": "https://rseng.github.io/software/api/repos/github/stefanradev93/BayesFlow"}, {"uid": "github/cire-thk/BifacialSimu", "html_url": "https://rseng.github.io/software/repository/github/cire-thk/BifacialSimu", "api_url": "https://rseng.github.io/software/api/repos/github/cire-thk/BifacialSimu"}, {"uid": "github/lazear/sage", "html_url": "https://rseng.github.io/software/repository/github/lazear/sage", "api_url": "https://rseng.github.io/software/api/repos/github/lazear/sage"}, {"uid": "github/ElsevierSoftwareX/SOFTX_2020_119", "html_url": "https://rseng.github.io/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", "api_url": "https://rseng.github.io/software/api/repos/github/ElsevierSoftwareX/SOFTX_2020_119"}, {"uid": "github/RichardPIII/Cumulative-Time-Dilation", "html_url": "https://rseng.github.io/software/repository/github/RichardPIII/Cumulative-Time-Dilation", "api_url": "https://rseng.github.io/software/api/repos/github/RichardPIII/Cumulative-Time-Dilation"}, {"uid": "github/SPARTA-dev/SPARTA", "html_url": "https://rseng.github.io/software/repository/github/SPARTA-dev/SPARTA", "api_url": "https://rseng.github.io/software/api/repos/github/SPARTA-dev/SPARTA"}, {"uid": "github/PaulMcMillan-Astro/Torus", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/Torus", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/Torus"}, {"uid": "github/PaulMcMillan-Astro/GalPot", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/GalPot", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/GalPot"}, {"uid": "github/nbellomo/Multi_CLASS", "html_url": "https://rseng.github.io/software/repository/github/nbellomo/Multi_CLASS", "api_url": "https://rseng.github.io/software/api/repos/github/nbellomo/Multi_CLASS"}, {"uid": "github/biobakery/halla", "html_url": "https://rseng.github.io/software/repository/github/biobakery/halla", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/halla"}, {"uid": "github/biobakery/MetaPhlAn", "html_url": "https://rseng.github.io/software/repository/github/biobakery/MetaPhlAn", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/MetaPhlAn"}, {"uid": "github/biobakery/phylophlan", "html_url": "https://rseng.github.io/software/repository/github/biobakery/phylophlan", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/phylophlan"}, {"uid": "github/eas342/tshirt", "html_url": "https://rseng.github.io/software/repository/github/eas342/tshirt", "api_url": "https://rseng.github.io/software/api/repos/github/eas342/tshirt"}, {"uid": "github/tonhingm/PHOTOe-v1", "html_url": "https://rseng.github.io/software/repository/github/tonhingm/PHOTOe-v1", "api_url": "https://rseng.github.io/software/api/repos/github/tonhingm/PHOTOe-v1"}, {"uid": "github/MichaelDAlbrow/CMDFitter", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/CMDFitter", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/CMDFitter"}, {"uid": "github/MichaelDAlbrow/pyDIA", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/pyDIA", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/pyDIA"}, {"uid": "github/MichaelDAlbrow/Dazzle", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/Dazzle", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/Dazzle"}, {"uid": "github/JulianBMunoz/RelicFast", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/RelicFast", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/RelicFast"}, {"uid": "github/JulianBMunoz/Zeus21", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/Zeus21", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/Zeus21"}, {"uid": "github/JulianBMunoz/21cmvFAST", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/21cmvFAST", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/21cmvFAST"}, {"uid": "github/fdebras/ECLIPS3D", "html_url": "https://rseng.github.io/software/repository/github/fdebras/ECLIPS3D", "api_url": "https://rseng.github.io/software/api/repos/github/fdebras/ECLIPS3D"}, {"uid": "github/kundajelab/phantompeakqualtools", "html_url": "https://rseng.github.io/software/repository/github/kundajelab/phantompeakqualtools", "api_url": "https://rseng.github.io/software/api/repos/github/kundajelab/phantompeakqualtools"}, {"uid": "github/chihchunhsu/smart", "html_url": "https://rseng.github.io/software/repository/github/chihchunhsu/smart", "api_url": "https://rseng.github.io/software/api/repos/github/chihchunhsu/smart"}, {"uid": "github/wokast/RePrimAnd", "html_url": "https://rseng.github.io/software/repository/github/wokast/RePrimAnd", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/RePrimAnd"}, {"uid": "github/wokast/PyCactus", "html_url": "https://rseng.github.io/software/repository/github/wokast/PyCactus", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/PyCactus"}, {"uid": "github/jakelangham/kestrel", "html_url": "https://rseng.github.io/software/repository/github/jakelangham/kestrel", "api_url": "https://rseng.github.io/software/api/repos/github/jakelangham/kestrel"}, {"uid": "github/insilicomedicine/GENTRL", "html_url": "https://rseng.github.io/software/repository/github/insilicomedicine/GENTRL", "api_url": "https://rseng.github.io/software/api/repos/github/insilicomedicine/GENTRL"}, {"uid": "github/scikit-image/scikit-image", "html_url": "https://rseng.github.io/software/repository/github/scikit-image/scikit-image", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-image/scikit-image"}, {"uid": "github/JustinYKC/FEPOPS", "html_url": "https://rseng.github.io/software/repository/github/JustinYKC/FEPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/JustinYKC/FEPOPS"}, {"uid": "github/wilkelab/Opfi", "html_url": "https://rseng.github.io/software/repository/github/wilkelab/Opfi", "api_url": "https://rseng.github.io/software/api/repos/github/wilkelab/Opfi"}, {"uid": "github/thiago-glissoi/FFF-Line-Segmentation", "html_url": "https://rseng.github.io/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/thiago-glissoi/FFF-Line-Segmentation"}, {"uid": "github/pavanvyn/triple-stability", "html_url": "https://rseng.github.io/software/repository/github/pavanvyn/triple-stability", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvyn/triple-stability"}, {"uid": "github/statistical-thinking/KI.ENNA", "html_url": "https://rseng.github.io/software/repository/github/statistical-thinking/KI.ENNA", "api_url": "https://rseng.github.io/software/api/repos/github/statistical-thinking/KI.ENNA"}, {"uid": "github/BioGenies/AMPBenchmark", "html_url": "https://rseng.github.io/software/repository/github/BioGenies/AMPBenchmark", "api_url": "https://rseng.github.io/software/api/repos/github/BioGenies/AMPBenchmark"}, {"uid": "github/ggobi/ggobi", "html_url": "https://rseng.github.io/software/repository/github/ggobi/ggobi", "api_url": "https://rseng.github.io/software/api/repos/github/ggobi/ggobi"}, {"uid": "github/bcgsc/ntHash", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntHash", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntHash"}, {"uid": "github/bcgsc/goldrush", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/goldrush", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/goldrush"}, {"uid": "github/bcgsc/TMBur", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/TMBur", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/TMBur"}, {"uid": "github/bcgsc/longstitch", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/longstitch", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/longstitch"}, {"uid": "github/bcgsc/ntCard", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntCard", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntCard"}, {"uid": "github/bcgsc/NanoSim", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/NanoSim", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/NanoSim"}, {"uid": "github/bcgsc/arcs", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/arcs", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/arcs"}, {"uid": "github/bcgsc/btllib", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/btllib", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/btllib"}, {"uid": "github/bcgsc/abyss", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/abyss", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/abyss"}, {"uid": "github/bcgsc/tigmint", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/tigmint", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/tigmint"}, {"uid": "github/YangLab/RNAlight", "html_url": "https://rseng.github.io/software/repository/github/YangLab/RNAlight", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/RNAlight"}, {"uid": "github/YangLab/CIRCexplorer2", "html_url": "https://rseng.github.io/software/repository/github/YangLab/CIRCexplorer2", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/CIRCexplorer2"}, {"uid": "github/schlafly/crowdsource", "html_url": "https://rseng.github.io/software/repository/github/schlafly/crowdsource", "api_url": "https://rseng.github.io/software/api/repos/github/schlafly/crowdsource"}, {"uid": "github/ToHanwei/Genome2OR", "html_url": "https://rseng.github.io/software/repository/github/ToHanwei/Genome2OR", "api_url": "https://rseng.github.io/software/api/repos/github/ToHanwei/Genome2OR"}, {"uid": "github/CRG-CNAG/anubis", "html_url": "https://rseng.github.io/software/repository/github/CRG-CNAG/anubis", "api_url": "https://rseng.github.io/software/api/repos/github/CRG-CNAG/anubis"}, {"uid": "github/AFD-Illinois/ebhlight", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/ebhlight", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/ebhlight"}, {"uid": "github/AFD-Illinois/iharm3d", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/iharm3d", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/iharm3d"}, {"uid": "github/ajeldorado/falco-matlab", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-matlab"}, {"uid": "github/ajeldorado/falco-python", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-python", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-python"}, {"uid": "github/0x0f0f0f/Metatheory.jl", "html_url": "https://rseng.github.io/software/repository/github/0x0f0f0f/Metatheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/0x0f0f0f/Metatheory.jl"}, {"uid": "github/fraserw/TRIPPy", "html_url": "https://rseng.github.io/software/repository/github/fraserw/TRIPPy", "api_url": "https://rseng.github.io/software/api/repos/github/fraserw/TRIPPy"}, {"uid": "github/cloudflex-project/cloudflex", "html_url": "https://rseng.github.io/software/repository/github/cloudflex-project/cloudflex", "api_url": "https://rseng.github.io/software/api/repos/github/cloudflex-project/cloudflex"}, {"uid": "github/mindearth/mobilkit", "html_url": "https://rseng.github.io/software/repository/github/mindearth/mobilkit", "api_url": "https://rseng.github.io/software/api/repos/github/mindearth/mobilkit"}, {"uid": "github/decargroup/pykoop", "html_url": "https://rseng.github.io/software/repository/github/decargroup/pykoop", "api_url": "https://rseng.github.io/software/api/repos/github/decargroup/pykoop"}, {"uid": "github/linsalrob/PhiSpy", "html_url": "https://rseng.github.io/software/repository/github/linsalrob/PhiSpy", "api_url": "https://rseng.github.io/software/api/repos/github/linsalrob/PhiSpy"}, {"uid": "github/hippylib/soupy", "html_url": "https://rseng.github.io/software/repository/github/hippylib/soupy", "api_url": "https://rseng.github.io/software/api/repos/github/hippylib/soupy"}, {"uid": "github/multiply-org/sar-pre-processing", "html_url": "https://rseng.github.io/software/repository/github/multiply-org/sar-pre-processing", "api_url": "https://rseng.github.io/software/api/repos/github/multiply-org/sar-pre-processing"}, {"uid": "github/paulsengroup/hictk", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictk", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictk"}, {"uid": "github/paulsengroup/hictkpy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkpy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkpy"}, {"uid": "github/paulsengroup/StripePy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/StripePy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/StripePy"}, {"uid": "github/paulsengroup/hictkR", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkR", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkR"}, {"uid": "github/JuliaLang/julia", "html_url": "https://rseng.github.io/software/repository/github/JuliaLang/julia", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaLang/julia"}, {"uid": "github/seqan/lara", "html_url": "https://rseng.github.io/software/repository/github/seqan/lara", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lara"}, {"uid": "github/seqan/lambda", "html_url": "https://rseng.github.io/software/repository/github/seqan/lambda", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lambda"}, {"uid": "github/seqan/flexbar", "html_url": "https://rseng.github.io/software/repository/github/seqan/flexbar", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/flexbar"}, {"uid": "github/parthenon-hpc-lab/parthenon", "html_url": "https://rseng.github.io/software/repository/github/parthenon-hpc-lab/parthenon", "api_url": "https://rseng.github.io/software/api/repos/github/parthenon-hpc-lab/parthenon"}, {"uid": "github/jeertmans/DiffeRT2d", "html_url": "https://rseng.github.io/software/repository/github/jeertmans/DiffeRT2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeertmans/DiffeRT2d"}, {"uid": "github/kritiyer/AngioNet", "html_url": "https://rseng.github.io/software/repository/github/kritiyer/AngioNet", "api_url": "https://rseng.github.io/software/api/repos/github/kritiyer/AngioNet"}, {"uid": "github/chocoteam/pychoco", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/pychoco", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/pychoco"}, {"uid": "github/chocoteam/choco-solver", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/choco-solver", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/choco-solver"}, {"uid": "github/python-hydro/pyro2", "html_url": "https://rseng.github.io/software/repository/github/python-hydro/pyro2", "api_url": "https://rseng.github.io/software/api/repos/github/python-hydro/pyro2"}, {"uid": "github/NSAPH-Software/CRE", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/CRE", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/CRE"}, {"uid": "github/NSAPH-Software/GPCERF", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/GPCERF", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/GPCERF"}, {"uid": "github/optuna/optuna", "html_url": "https://rseng.github.io/software/repository/github/optuna/optuna", "api_url": "https://rseng.github.io/software/api/repos/github/optuna/optuna"}, {"uid": "github/tcollett/LensPop", "html_url": "https://rseng.github.io/software/repository/github/tcollett/LensPop", "api_url": "https://rseng.github.io/software/api/repos/github/tcollett/LensPop"}, {"uid": "github/benlansdell/ethome", "html_url": "https://rseng.github.io/software/repository/github/benlansdell/ethome", "api_url": "https://rseng.github.io/software/api/repos/github/benlansdell/ethome"}, {"uid": "github/beagle-dev/beagle-lib", "html_url": "https://rseng.github.io/software/repository/github/beagle-dev/beagle-lib", "api_url": "https://rseng.github.io/software/api/repos/github/beagle-dev/beagle-lib"}, {"uid": "github/astro-datalab/noaosourcecatalog", "html_url": "https://rseng.github.io/software/repository/github/astro-datalab/noaosourcecatalog", "api_url": "https://rseng.github.io/software/api/repos/github/astro-datalab/noaosourcecatalog"}, {"uid": "github/ChenfuShi/HiChIP_peaks", "html_url": "https://rseng.github.io/software/repository/github/ChenfuShi/HiChIP_peaks", "api_url": "https://rseng.github.io/software/api/repos/github/ChenfuShi/HiChIP_peaks"}, {"uid": "github/Gaiana/nirdust", "html_url": "https://rseng.github.io/software/repository/github/Gaiana/nirdust", "api_url": "https://rseng.github.io/software/api/repos/github/Gaiana/nirdust"}, {"uid": "github/duetosymmetry/qnm", "html_url": "https://rseng.github.io/software/repository/github/duetosymmetry/qnm", "api_url": "https://rseng.github.io/software/api/repos/github/duetosymmetry/qnm"}, {"uid": "github/aiproteomics/aiproteomics", "html_url": "https://rseng.github.io/software/repository/github/aiproteomics/aiproteomics", "api_url": "https://rseng.github.io/software/api/repos/github/aiproteomics/aiproteomics"}, {"uid": "github/Hoeijmakers/tayph", "html_url": "https://rseng.github.io/software/repository/github/Hoeijmakers/tayph", "api_url": "https://rseng.github.io/software/api/repos/github/Hoeijmakers/tayph"}, {"uid": "github/agordon/fastx_toolkit", "html_url": "https://rseng.github.io/software/repository/github/agordon/fastx_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/agordon/fastx_toolkit"}, {"uid": "github/mamartinod/grip-nulling", "html_url": "https://rseng.github.io/software/repository/github/mamartinod/grip-nulling", "api_url": "https://rseng.github.io/software/api/repos/github/mamartinod/grip-nulling"}, {"uid": "github/tnakazato/priism", "html_url": "https://rseng.github.io/software/repository/github/tnakazato/priism", "api_url": "https://rseng.github.io/software/api/repos/github/tnakazato/priism"}, {"uid": "github/benjaminbolling/DynaGUI", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/DynaGUI", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/DynaGUI"}, {"uid": "github/benjaminbolling/RSW", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/RSW", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/RSW"}, {"uid": "github/BrianAronson/birankr", "html_url": "https://rseng.github.io/software/repository/github/BrianAronson/birankr", "api_url": "https://rseng.github.io/software/api/repos/github/BrianAronson/birankr"}, {"uid": "github/nickelnine37/pykronecker", "html_url": "https://rseng.github.io/software/repository/github/nickelnine37/pykronecker", "api_url": "https://rseng.github.io/software/api/repos/github/nickelnine37/pykronecker"}, {"uid": "github/chakrah/sage", "html_url": "https://rseng.github.io/software/repository/github/chakrah/sage", "api_url": "https://rseng.github.io/software/api/repos/github/chakrah/sage"}, {"uid": "github/python-streamz/streamz", "html_url": "https://rseng.github.io/software/repository/github/python-streamz/streamz", "api_url": "https://rseng.github.io/software/api/repos/github/python-streamz/streamz"}, {"uid": "github/CadenArmstrong/simuTrans", "html_url": "https://rseng.github.io/software/repository/github/CadenArmstrong/simuTrans", "api_url": "https://rseng.github.io/software/api/repos/github/CadenArmstrong/simuTrans"}, {"uid": "github/newcleo-dev-team/lbh15", "html_url": "https://rseng.github.io/software/repository/github/newcleo-dev-team/lbh15", "api_url": "https://rseng.github.io/software/api/repos/github/newcleo-dev-team/lbh15"}, {"uid": "github/GaetanBenoitDev/metaMDBG", "html_url": "https://rseng.github.io/software/repository/github/GaetanBenoitDev/metaMDBG", "api_url": "https://rseng.github.io/software/api/repos/github/GaetanBenoitDev/metaMDBG"}, {"uid": "github/Jurgenvilla/moons-sim", "html_url": "https://rseng.github.io/software/repository/github/Jurgenvilla/moons-sim", "api_url": "https://rseng.github.io/software/api/repos/github/Jurgenvilla/moons-sim"}, {"uid": "github/wpb-astro/MCSED", "html_url": "https://rseng.github.io/software/repository/github/wpb-astro/MCSED", "api_url": "https://rseng.github.io/software/api/repos/github/wpb-astro/MCSED"}, {"uid": "github/SimonPfeifer/cows", "html_url": "https://rseng.github.io/software/repository/github/SimonPfeifer/cows", "api_url": "https://rseng.github.io/software/api/repos/github/SimonPfeifer/cows"}, {"uid": "github/pennucci/PulsePortraiture", "html_url": "https://rseng.github.io/software/repository/github/pennucci/PulsePortraiture", "api_url": "https://rseng.github.io/software/api/repos/github/pennucci/PulsePortraiture"}, {"uid": "github/minkailin/stratsi", "html_url": "https://rseng.github.io/software/repository/github/minkailin/stratsi", "api_url": "https://rseng.github.io/software/api/repos/github/minkailin/stratsi"}, {"uid": "github/dealii/dealii", "html_url": "https://rseng.github.io/software/repository/github/dealii/dealii", "api_url": "https://rseng.github.io/software/api/repos/github/dealii/dealii"}, {"uid": "github/3D-e-Chem/kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/kripodb"}, {"uid": "github/3D-e-Chem/knime-sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sygma"}, {"uid": "github/3D-e-Chem/knime-testflow", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-testflow", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-testflow"}, {"uid": "github/3D-e-Chem/3D-e-Chem-VM", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/3D-e-Chem-VM", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/3D-e-Chem-VM"}, {"uid": "github/3D-e-Chem/knime-python-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-node-archetype"}, {"uid": "github/3D-e-Chem/knime-silicos-it", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-silicos-it", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-silicos-it"}, {"uid": "github/3D-e-Chem/knime-sstea", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sstea", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sstea"}, {"uid": "github/3D-e-Chem/knime-kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-kripodb"}, {"uid": "github/3D-e-Chem/tycho-knime-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/tycho-knime-node-archetype"}, {"uid": "github/3D-e-Chem/sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/sygma"}, {"uid": "github/3D-e-Chem/knime-gpcrdb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-gpcrdb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-gpcrdb"}, {"uid": "github/3D-e-Chem/knime-molviewer", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-molviewer", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-molviewer"}, {"uid": "github/3D-e-Chem/knime-pharmacophore", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-pharmacophore", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-pharmacophore"}, {"uid": "github/3D-e-Chem/knime-klifs", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-klifs", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-klifs"}, {"uid": "github/3D-e-Chem/knime-plants", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-plants", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-plants"}, {"uid": "github/3D-e-Chem/knime-python-wrapper", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-wrapper"}, {"uid": "github/apcamargo/prodigal-gv", "html_url": "https://rseng.github.io/software/repository/github/apcamargo/prodigal-gv", "api_url": "https://rseng.github.io/software/api/repos/github/apcamargo/prodigal-gv"}, {"uid": "github/radiocosmology/driftscan", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/driftscan", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/driftscan"}, {"uid": "github/radiocosmology/caput", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/caput", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/caput"}, {"uid": "github/radiocosmology/draco", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/draco", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/draco"}, {"uid": "github/avapolzin/spike", "html_url": "https://rseng.github.io/software/repository/github/avapolzin/spike", "api_url": "https://rseng.github.io/software/api/repos/github/avapolzin/spike"}, {"uid": "github/theonefromnowhere/FitCov", "html_url": "https://rseng.github.io/software/repository/github/theonefromnowhere/FitCov", "api_url": "https://rseng.github.io/software/api/repos/github/theonefromnowhere/FitCov"}, {"uid": "github/cconroy20/alf", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/alf", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/alf"}, {"uid": "github/cconroy20/fsps", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/fsps", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/fsps"}, {"uid": "github/openvax/pyensembl", "html_url": "https://rseng.github.io/software/repository/github/openvax/pyensembl", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/pyensembl"}, {"uid": "github/openvax/mhcflurry", "html_url": "https://rseng.github.io/software/repository/github/openvax/mhcflurry", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/mhcflurry"}, {"uid": "github/dcorre/otrain", "html_url": "https://rseng.github.io/software/repository/github/dcorre/otrain", "api_url": "https://rseng.github.io/software/api/repos/github/dcorre/otrain"}, {"uid": "github/agshumate/LiftoffTools", "html_url": "https://rseng.github.io/software/repository/github/agshumate/LiftoffTools", "api_url": "https://rseng.github.io/software/api/repos/github/agshumate/LiftoffTools"}, {"uid": "github/fairtracks/omnipy_examples", "html_url": "https://rseng.github.io/software/repository/github/fairtracks/omnipy_examples", "api_url": "https://rseng.github.io/software/api/repos/github/fairtracks/omnipy_examples"}, {"uid": "github/pavanvidem/chira", "html_url": "https://rseng.github.io/software/repository/github/pavanvidem/chira", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvidem/chira"}, {"uid": "github/mc-imperial/gpuverify", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/gpuverify", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/gpuverify"}, {"uid": "github/mc-imperial/jfs", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/jfs", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/jfs"}, {"uid": "github/mc-imperial/multicore-test-harness", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/multicore-test-harness", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/multicore-test-harness"}, {"uid": "github/leprojetcastor/castor", "html_url": "https://rseng.github.io/software/repository/github/leprojetcastor/castor", "api_url": "https://rseng.github.io/software/api/repos/github/leprojetcastor/castor"}, {"uid": "github/yfperezg/frisbhee", "html_url": "https://rseng.github.io/software/repository/github/yfperezg/frisbhee", "api_url": "https://rseng.github.io/software/api/repos/github/yfperezg/frisbhee"}, {"uid": "github/spedas/pyspedas", "html_url": "https://rseng.github.io/software/repository/github/spedas/pyspedas", "api_url": "https://rseng.github.io/software/api/repos/github/spedas/pyspedas"}, {"uid": "github/Libsharp/libsharp", "html_url": "https://rseng.github.io/software/repository/github/Libsharp/libsharp", "api_url": "https://rseng.github.io/software/api/repos/github/Libsharp/libsharp"}, {"uid": "github/vincentlab/PyFR", "html_url": "https://rseng.github.io/software/repository/github/vincentlab/PyFR", "api_url": "https://rseng.github.io/software/api/repos/github/vincentlab/PyFR"}, {"uid": "github/nuclear-multimessenger-astronomy/nmma", "html_url": "https://rseng.github.io/software/repository/github/nuclear-multimessenger-astronomy/nmma", "api_url": "https://rseng.github.io/software/api/repos/github/nuclear-multimessenger-astronomy/nmma"}, {"uid": "github/nboley/idr", "html_url": "https://rseng.github.io/software/repository/github/nboley/idr", "api_url": "https://rseng.github.io/software/api/repos/github/nboley/idr"}, {"uid": "github/grzeimann/Diagnose", "html_url": "https://rseng.github.io/software/repository/github/grzeimann/Diagnose", "api_url": "https://rseng.github.io/software/api/repos/github/grzeimann/Diagnose"}, {"uid": "github/FRED-2/OptiType", "html_url": "https://rseng.github.io/software/repository/github/FRED-2/OptiType", "api_url": "https://rseng.github.io/software/api/repos/github/FRED-2/OptiType"}, {"uid": "github/bhorowitz/HyPhy-public", "html_url": "https://rseng.github.io/software/repository/github/bhorowitz/HyPhy-public", "api_url": "https://rseng.github.io/software/api/repos/github/bhorowitz/HyPhy-public"}, {"uid": "github/somefunAgba/NLSIG-COVID19Lab", "html_url": "https://rseng.github.io/software/repository/github/somefunAgba/NLSIG-COVID19Lab", "api_url": "https://rseng.github.io/software/api/repos/github/somefunAgba/NLSIG-COVID19Lab"}, {"uid": "github/xstarkit/mpi_xstar", "html_url": "https://rseng.github.io/software/repository/github/xstarkit/mpi_xstar", "api_url": "https://rseng.github.io/software/api/repos/github/xstarkit/mpi_xstar"}, {"uid": "github/BradhamLab/icat", "html_url": "https://rseng.github.io/software/repository/github/BradhamLab/icat", "api_url": "https://rseng.github.io/software/api/repos/github/BradhamLab/icat"}, {"uid": "github/sciapp/sampledb", "html_url": "https://rseng.github.io/software/repository/github/sciapp/sampledb", "api_url": "https://rseng.github.io/software/api/repos/github/sciapp/sampledb"}, {"uid": "github/TearsWaiting/MIMML", "html_url": "https://rseng.github.io/software/repository/github/TearsWaiting/MIMML", "api_url": "https://rseng.github.io/software/api/repos/github/TearsWaiting/MIMML"}, {"uid": "github/jaschers/damspi", "html_url": "https://rseng.github.io/software/repository/github/jaschers/damspi", "api_url": "https://rseng.github.io/software/api/repos/github/jaschers/damspi"}, {"uid": "github/oscaribv/pyaneti", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/pyaneti", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/pyaneti"}, {"uid": "github/oscaribv/exotrending", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/exotrending", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/exotrending"}, {"uid": "github/oscaribv/citlalicue", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/citlalicue", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/citlalicue"}, {"uid": "github/dutilh/CAT", "html_url": "https://rseng.github.io/software/repository/github/dutilh/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/dutilh/CAT"}, {"uid": "github/ruggiero/clustep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/clustep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/clustep"}, {"uid": "github/ruggiero/galstep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/galstep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/galstep"}, {"uid": "github/AnthonyOfSeattle/pyAscoreValidation", "html_url": "https://rseng.github.io/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", "api_url": "https://rseng.github.io/software/api/repos/github/AnthonyOfSeattle/pyAscoreValidation"}, {"uid": "github/ryanvarley/exodata", "html_url": "https://rseng.github.io/software/repository/github/ryanvarley/exodata", "api_url": "https://rseng.github.io/software/api/repos/github/ryanvarley/exodata"}, {"uid": "github/bmvdgeijn/WASP", "html_url": "https://rseng.github.io/software/repository/github/bmvdgeijn/WASP", "api_url": "https://rseng.github.io/software/api/repos/github/bmvdgeijn/WASP"}, {"uid": "github/milnus/Corekaburra", "html_url": "https://rseng.github.io/software/repository/github/milnus/Corekaburra", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Corekaburra"}, {"uid": "github/milnus/Magphi", "html_url": "https://rseng.github.io/software/repository/github/milnus/Magphi", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Magphi"}, {"uid": "github/thomaspinder/GPJax", "html_url": "https://rseng.github.io/software/repository/github/thomaspinder/GPJax", "api_url": "https://rseng.github.io/software/api/repos/github/thomaspinder/GPJax"}, {"uid": "github/AdmiralenOla/Scoary", "html_url": "https://rseng.github.io/software/repository/github/AdmiralenOla/Scoary", "api_url": "https://rseng.github.io/software/api/repos/github/AdmiralenOla/Scoary"}, {"uid": "github/metagenopolis/CroCoDeEL", "html_url": "https://rseng.github.io/software/repository/github/metagenopolis/CroCoDeEL", "api_url": "https://rseng.github.io/software/api/repos/github/metagenopolis/CroCoDeEL"}, {"uid": "github/konfound-project/konfound", "html_url": "https://rseng.github.io/software/repository/github/konfound-project/konfound", "api_url": "https://rseng.github.io/software/api/repos/github/konfound-project/konfound"}, {"uid": "github/pepamengual/UEP", "html_url": "https://rseng.github.io/software/repository/github/pepamengual/UEP", "api_url": "https://rseng.github.io/software/api/repos/github/pepamengual/UEP"}, {"uid": "github/jupyter/notebook", "html_url": "https://rseng.github.io/software/repository/github/jupyter/notebook", "api_url": "https://rseng.github.io/software/api/repos/github/jupyter/notebook"}, {"uid": "github/bbuchfink/diamond", "html_url": "https://rseng.github.io/software/repository/github/bbuchfink/diamond", "api_url": "https://rseng.github.io/software/api/repos/github/bbuchfink/diamond"}, {"uid": "github/TabeaSonnenschein/CellAutDisp", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/CellAutDisp", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/CellAutDisp"}, {"uid": "github/TabeaSonnenschein/UrbHealth-ABM", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/UrbHealth-ABM"}, {"uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions"}, {"uid": "github/TabeaSonnenschein/GenSynthPop", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/GenSynthPop", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/GenSynthPop"}, {"uid": "github/cobilab/RFSC", "html_url": "https://rseng.github.io/software/repository/github/cobilab/RFSC", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/RFSC"}, {"uid": "github/cobilab/OptimJV3", "html_url": "https://rseng.github.io/software/repository/github/cobilab/OptimJV3", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/OptimJV3"}, {"uid": "github/cobilab/altair", "html_url": "https://rseng.github.io/software/repository/github/cobilab/altair", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/altair"}, {"uid": "github/purmortal/galcraft", "html_url": "https://rseng.github.io/software/repository/github/purmortal/galcraft", "api_url": "https://rseng.github.io/software/api/repos/github/purmortal/galcraft"}, {"uid": "github/ebellm/pyraf-dbsp", "html_url": "https://rseng.github.io/software/repository/github/ebellm/pyraf-dbsp", "api_url": "https://rseng.github.io/software/api/repos/github/ebellm/pyraf-dbsp"}, {"uid": "github/pierrepo/autoclassweb", "html_url": "https://rseng.github.io/software/repository/github/pierrepo/autoclassweb", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepo/autoclassweb"}, {"uid": "github/guillochon/MOSFiT", "html_url": "https://rseng.github.io/software/repository/github/guillochon/MOSFiT", "api_url": "https://rseng.github.io/software/api/repos/github/guillochon/MOSFiT"}, {"uid": "github/DamynChipman/EllipticForest", "html_url": "https://rseng.github.io/software/repository/github/DamynChipman/EllipticForest", "api_url": "https://rseng.github.io/software/api/repos/github/DamynChipman/EllipticForest"}, {"uid": "github/DEIB-GECO/CRIS_single-sample", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CRIS_single-sample", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CRIS_single-sample"}, {"uid": "github/DEIB-GECO/VarSum", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/VarSum", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/VarSum"}, {"uid": "github/DEIB-GECO/OpenGDC", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/OpenGDC", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/OpenGDC"}, {"uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/BC_Intrinsic_subtyping"}, {"uid": "github/DEIB-GECO/CombSAFE", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CombSAFE", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CombSAFE"}, {"uid": "github/DEIB-GECO/flu-warning-system", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/flu-warning-system", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/flu-warning-system"}, {"uid": "github/DEIB-GECO/GeneNetFusion", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/GeneNetFusion", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/GeneNetFusion"}, {"uid": "github/DEIB-GECO/MutViz", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/MutViz", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/MutViz"}, {"uid": "github/DEIB-GECO/ReRa", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/ReRa", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/ReRa"}, {"uid": "github/DEIB-GECO/genereg", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/genereg", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/genereg"}, {"uid": "github/jbattat/pep_core", "html_url": "https://rseng.github.io/software/repository/github/jbattat/pep_core", "api_url": "https://rseng.github.io/software/api/repos/github/jbattat/pep_core"}, {"uid": "github/mgieles/limepy", "html_url": "https://rseng.github.io/software/repository/github/mgieles/limepy", "api_url": "https://rseng.github.io/software/api/repos/github/mgieles/limepy"}, {"uid": "github/KeplerGO/PyKE", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/PyKE", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/PyKE"}, {"uid": "github/KeplerGO/K2fov", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/K2fov", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/K2fov"}, {"uid": "github/KeplerGO/kadenza", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/kadenza", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/kadenza"}, {"uid": "github/KeplerGO/k2mosaic", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/k2mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/k2mosaic"}, {"uid": "github/OpenMDAO/dymos", "html_url": "https://rseng.github.io/software/repository/github/OpenMDAO/dymos", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMDAO/dymos"}, {"uid": "github/ashleefv/ACEInhibPKPD", "html_url": "https://rseng.github.io/software/repository/github/ashleefv/ACEInhibPKPD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleefv/ACEInhibPKPD"}, {"uid": "github/MCTwo/MCMAC", "html_url": "https://rseng.github.io/software/repository/github/MCTwo/MCMAC", "api_url": "https://rseng.github.io/software/api/repos/github/MCTwo/MCMAC"}, {"uid": "github/danStich/dia", "html_url": "https://rseng.github.io/software/repository/github/danStich/dia", "api_url": "https://rseng.github.io/software/api/repos/github/danStich/dia"}, {"uid": "github/csmsoftware/IMPaCTS", "html_url": "https://rseng.github.io/software/repository/github/csmsoftware/IMPaCTS", "api_url": "https://rseng.github.io/software/api/repos/github/csmsoftware/IMPaCTS"}, {"uid": "github/EIT-ALIVE/eitprocessing", "html_url": "https://rseng.github.io/software/repository/github/EIT-ALIVE/eitprocessing", "api_url": "https://rseng.github.io/software/api/repos/github/EIT-ALIVE/eitprocessing"}, {"uid": "github/mattwarkentin/openmpp", "html_url": "https://rseng.github.io/software/repository/github/mattwarkentin/openmpp", "api_url": "https://rseng.github.io/software/api/repos/github/mattwarkentin/openmpp"}, {"uid": "github/zhang-zhixiang/spectool", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/spectool", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/spectool"}, {"uid": "github/zhang-zhixiang/stellarSpecModel", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/stellarSpecModel", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/stellarSpecModel"}, {"uid": "github/supernnova/SuperNNova", "html_url": "https://rseng.github.io/software/repository/github/supernnova/SuperNNova", "api_url": "https://rseng.github.io/software/api/repos/github/supernnova/SuperNNova"}, {"uid": "github/DyHealthNet/NApy", "html_url": "https://rseng.github.io/software/repository/github/DyHealthNet/NApy", "api_url": "https://rseng.github.io/software/api/repos/github/DyHealthNet/NApy"}, {"uid": "github/yanliang-astro/aestra", "html_url": "https://rseng.github.io/software/repository/github/yanliang-astro/aestra", "api_url": "https://rseng.github.io/software/api/repos/github/yanliang-astro/aestra"}, {"uid": "github/spacetx/starfish", "html_url": "https://rseng.github.io/software/repository/github/spacetx/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/spacetx/starfish"}, {"uid": "github/atchekho/harmpi", "html_url": "https://rseng.github.io/software/repository/github/atchekho/harmpi", "api_url": "https://rseng.github.io/software/api/repos/github/atchekho/harmpi"}, {"uid": "github/BenMql/coral", "html_url": "https://rseng.github.io/software/repository/github/BenMql/coral", "api_url": "https://rseng.github.io/software/api/repos/github/BenMql/coral"}, {"uid": "github/EnergyModelsX/EnergyModelsBase.jl", "html_url": "https://rseng.github.io/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EnergyModelsX/EnergyModelsBase.jl"}, {"uid": "github/ch-var/SMART", "html_url": "https://rseng.github.io/software/repository/github/ch-var/SMART", "api_url": "https://rseng.github.io/software/api/repos/github/ch-var/SMART"}, {"uid": "github/gianthk/ciclope", "html_url": "https://rseng.github.io/software/repository/github/gianthk/ciclope", "api_url": "https://rseng.github.io/software/api/repos/github/gianthk/ciclope"}, {"uid": "github/MAnalytics/opitools", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/opitools", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/opitools"}, {"uid": "github/MAnalytics/akmedoids", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/akmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/akmedoids"}, {"uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", "html_url": "https://rseng.github.io/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", "api_url": "https://rseng.github.io/software/api/repos/github/BlackHolePerturbationToolkit/KerrGeoPy"}, {"uid": "github/zhongqiu1245/CCS-Net", "html_url": "https://rseng.github.io/software/repository/github/zhongqiu1245/CCS-Net", "api_url": "https://rseng.github.io/software/api/repos/github/zhongqiu1245/CCS-Net"}, {"uid": "github/jwohlwend/boltz", "html_url": "https://rseng.github.io/software/repository/github/jwohlwend/boltz", "api_url": "https://rseng.github.io/software/api/repos/github/jwohlwend/boltz"}, {"uid": "github/kbarbary/sep", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/sep", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/sep"}, {"uid": "github/kbarbary/nestle", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/nestle", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/nestle"}, {"uid": "github/kbarbary/extinction", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/extinction", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/extinction"}, {"uid": "github/dkoboldt/varscan", "html_url": "https://rseng.github.io/software/repository/github/dkoboldt/varscan", "api_url": "https://rseng.github.io/software/api/repos/github/dkoboldt/varscan"}, {"uid": "github/abmantz/lmc", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lmc", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lmc"}, {"uid": "github/abmantz/lrgs", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lrgs", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lrgs"}, {"uid": "github/abmantz/rgw", "html_url": "https://rseng.github.io/software/repository/github/abmantz/rgw", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/rgw"}, {"uid": "github/bregaldo/pywst", "html_url": "https://rseng.github.io/software/repository/github/bregaldo/pywst", "api_url": "https://rseng.github.io/software/api/repos/github/bregaldo/pywst"}, {"uid": "github/astropatel/twinkle", "html_url": "https://rseng.github.io/software/repository/github/astropatel/twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/astropatel/twinkle"}, {"uid": "github/zhangrengang/SubPhaser", "html_url": "https://rseng.github.io/software/repository/github/zhangrengang/SubPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/zhangrengang/SubPhaser"}, {"uid": "github/EdwardBerman/shopt", "html_url": "https://rseng.github.io/software/repository/github/EdwardBerman/shopt", "api_url": "https://rseng.github.io/software/api/repos/github/EdwardBerman/shopt"}, {"uid": "github/kendomaniac/docker4seq", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/docker4seq", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/docker4seq"}, {"uid": "github/kendomaniac/rCASC", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/rCASC", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/rCASC"}, {"uid": "github/prolfqua/prolfquapp", "html_url": "https://rseng.github.io/software/repository/github/prolfqua/prolfquapp", "api_url": "https://rseng.github.io/software/api/repos/github/prolfqua/prolfquapp"}, {"uid": "github/OnroerendErfgoed/atramhasis", "html_url": "https://rseng.github.io/software/repository/github/OnroerendErfgoed/atramhasis", "api_url": "https://rseng.github.io/software/api/repos/github/OnroerendErfgoed/atramhasis"}, {"uid": "github/szwiep/py_SBeLT", "html_url": "https://rseng.github.io/software/repository/github/szwiep/py_SBeLT", "api_url": "https://rseng.github.io/software/api/repos/github/szwiep/py_SBeLT"}, {"uid": "github/rega-cev/virulign", "html_url": "https://rseng.github.io/software/repository/github/rega-cev/virulign", "api_url": "https://rseng.github.io/software/api/repos/github/rega-cev/virulign"}, {"uid": "github/mjcarley/nbi", "html_url": "https://rseng.github.io/software/repository/github/mjcarley/nbi", "api_url": "https://rseng.github.io/software/api/repos/github/mjcarley/nbi"}, {"uid": "github/jan-rybizki/Galaxia_wrap", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Galaxia_wrap", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Galaxia_wrap"}, {"uid": "github/jan-rybizki/Chempy", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Chempy", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Chempy"}, {"uid": "github/jan-rybizki/gdr2_completeness", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/gdr2_completeness", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/gdr2_completeness"}, {"uid": "github/jtschindler/sculptor", "html_url": "https://rseng.github.io/software/repository/github/jtschindler/sculptor", "api_url": "https://rseng.github.io/software/api/repos/github/jtschindler/sculptor"}, {"uid": "github/E3SM-Project/gdess", "html_url": "https://rseng.github.io/software/repository/github/E3SM-Project/gdess", "api_url": "https://rseng.github.io/software/api/repos/github/E3SM-Project/gdess"}, {"uid": "github/Imperial-visualizations/Physics-Visualizations", "html_url": "https://rseng.github.io/software/repository/github/Imperial-visualizations/Physics-Visualizations", "api_url": "https://rseng.github.io/software/api/repos/github/Imperial-visualizations/Physics-Visualizations"}, {"uid": "github/philippbaumeister/ExoMDN", "html_url": "https://rseng.github.io/software/repository/github/philippbaumeister/ExoMDN", "api_url": "https://rseng.github.io/software/api/repos/github/philippbaumeister/ExoMDN"}, {"uid": "github/VasuLab/rgfrosh", "html_url": "https://rseng.github.io/software/repository/github/VasuLab/rgfrosh", "api_url": "https://rseng.github.io/software/api/repos/github/VasuLab/rgfrosh"}, {"uid": "github/CosmoStat/shapepipe", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/shapepipe", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/shapepipe"}, {"uid": "github/CosmoStat/score", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/score", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/score"}, {"uid": "github/CosmoStat/Glimpse", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/Glimpse", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/Glimpse"}, {"uid": "github/CosmoStat/mccd", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/mccd", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/mccd"}, {"uid": "github/pybamm-team/PyBaMM", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/PyBaMM", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/PyBaMM"}, {"uid": "github/pybamm-team/liionpack", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/liionpack", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/liionpack"}, {"uid": "github/LiuJJ0327/CCPE", "html_url": "https://rseng.github.io/software/repository/github/LiuJJ0327/CCPE", "api_url": "https://rseng.github.io/software/api/repos/github/LiuJJ0327/CCPE"}, {"uid": "github/kmsurrao/reMASTERed", "html_url": "https://rseng.github.io/software/repository/github/kmsurrao/reMASTERed", "api_url": "https://rseng.github.io/software/api/repos/github/kmsurrao/reMASTERed"}, {"uid": "github/RoryChenXY/DataRepExp_public", "html_url": "https://rseng.github.io/software/repository/github/RoryChenXY/DataRepExp_public", "api_url": "https://rseng.github.io/software/api/repos/github/RoryChenXY/DataRepExp_public"}, {"uid": "github/dparkins/CosmoNest", "html_url": "https://rseng.github.io/software/repository/github/dparkins/CosmoNest", "api_url": "https://rseng.github.io/software/api/repos/github/dparkins/CosmoNest"}, {"uid": "github/NiallJeffrey/DeepMass", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/DeepMass", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/DeepMass"}, {"uid": "github/NiallJeffrey/BornRaytrace", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/BornRaytrace", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/BornRaytrace"}, {"uid": "github/tomasstolker/ARTES", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/ARTES", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/ARTES"}, {"uid": "github/tomasstolker/species", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/species", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/species"}, {"uid": "github/tomasstolker/pycrires", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/pycrires", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/pycrires"}, {"uid": "github/PapenfussLab/gridss", "html_url": "https://rseng.github.io/software/repository/github/PapenfussLab/gridss", "api_url": "https://rseng.github.io/software/api/repos/github/PapenfussLab/gridss"}, {"uid": "github/PetroFit/petrofit", "html_url": "https://rseng.github.io/software/repository/github/PetroFit/petrofit", "api_url": "https://rseng.github.io/software/api/repos/github/PetroFit/petrofit"}, {"uid": "github/tensorlayer/tensorlayer", "html_url": "https://rseng.github.io/software/repository/github/tensorlayer/tensorlayer", "api_url": "https://rseng.github.io/software/api/repos/github/tensorlayer/tensorlayer"}, {"uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_lGRBs"}, {"uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_sGRBs"}, {"uid": "github/afarahi/tatter", "html_url": "https://rseng.github.io/software/repository/github/afarahi/tatter", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/tatter"}, {"uid": "github/afarahi/PoPE", "html_url": "https://rseng.github.io/software/repository/github/afarahi/PoPE", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/PoPE"}, {"uid": "github/afarahi/kllr", "html_url": "https://rseng.github.io/software/repository/github/afarahi/kllr", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/kllr"}, {"uid": "github/stevengj/nlopt", "html_url": "https://rseng.github.io/software/repository/github/stevengj/nlopt", "api_url": "https://rseng.github.io/software/api/repos/github/stevengj/nlopt"}, {"uid": "github/llrs/experDesign", "html_url": "https://rseng.github.io/software/repository/github/llrs/experDesign", "api_url": "https://rseng.github.io/software/api/repos/github/llrs/experDesign"}, {"uid": "github/nlesc-nano/flamingo", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/flamingo", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/flamingo"}, {"uid": "github/nlesc-nano/insilico-server", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/insilico-server", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/insilico-server"}, {"uid": "github/nlesc-nano/Moka", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/Moka", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/Moka"}, {"uid": "github/nlesc-nano/ceiba-cli", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba-cli", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba-cli"}, {"uid": "github/nlesc-nano/ceiba", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba"}, {"uid": "github/nlesc-nano/swan", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/swan", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/swan"}, {"uid": "github/nlesc-nano/CAT", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/CAT"}, {"uid": "github/SofieVG/FlowSOM", "html_url": "https://rseng.github.io/software/repository/github/SofieVG/FlowSOM", "api_url": "https://rseng.github.io/software/api/repos/github/SofieVG/FlowSOM"}, {"uid": "github/spicy-oil/hfs_fit", "html_url": "https://rseng.github.io/software/repository/github/spicy-oil/hfs_fit", "api_url": "https://rseng.github.io/software/api/repos/github/spicy-oil/hfs_fit"}, {"uid": "github/pw31/GGchem", "html_url": "https://rseng.github.io/software/repository/github/pw31/GGchem", "api_url": "https://rseng.github.io/software/api/repos/github/pw31/GGchem"}, {"uid": "github/megbedell/wobble", "html_url": "https://rseng.github.io/software/repository/github/megbedell/wobble", "api_url": "https://rseng.github.io/software/api/repos/github/megbedell/wobble"}, {"uid": "github/cgre-aachen/gemgis", "html_url": "https://rseng.github.io/software/repository/github/cgre-aachen/gemgis", "api_url": "https://rseng.github.io/software/api/repos/github/cgre-aachen/gemgis"}, {"uid": "github/BackofenLab/IntaRNA", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/IntaRNA", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/IntaRNA"}, {"uid": "github/BackofenLab/StoatyDive", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/StoatyDive", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/StoatyDive"}, {"uid": "github/BackofenLab/Peakhood", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/Peakhood", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/Peakhood"}, {"uid": "github/arjunsavel/SImMER", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/SImMER", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/SImMER"}, {"uid": "github/arjunsavel/cortecs", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/cortecs", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/cortecs"}, {"uid": "github/vidarsko/ComFiT", "html_url": "https://rseng.github.io/software/repository/github/vidarsko/ComFiT", "api_url": "https://rseng.github.io/software/api/repos/github/vidarsko/ComFiT"}, {"uid": "github/ZhangGroup-MITChemistry/OpenNucleome", "html_url": "https://rseng.github.io/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", "api_url": "https://rseng.github.io/software/api/repos/github/ZhangGroup-MITChemistry/OpenNucleome"}, {"uid": "github/EpiVec/TDLM", "html_url": "https://rseng.github.io/software/repository/github/EpiVec/TDLM", "api_url": "https://rseng.github.io/software/api/repos/github/EpiVec/TDLM"}, {"uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/AndreinaCastillo/Genie_manuscript_data_analysis"}, {"uid": "github/einsteinpy/einsteinpy", "html_url": "https://rseng.github.io/software/repository/github/einsteinpy/einsteinpy", "api_url": "https://rseng.github.io/software/api/repos/github/einsteinpy/einsteinpy"}, {"uid": "github/omboersma/deepglow", "html_url": "https://rseng.github.io/software/repository/github/omboersma/deepglow", "api_url": "https://rseng.github.io/software/api/repos/github/omboersma/deepglow"}, {"uid": "github/WatsonGroupTCD/J2suscep", "html_url": "https://rseng.github.io/software/repository/github/WatsonGroupTCD/J2suscep", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonGroupTCD/J2suscep"}, {"uid": "github/rkiman/wdwarfdate", "html_url": "https://rseng.github.io/software/repository/github/rkiman/wdwarfdate", "api_url": "https://rseng.github.io/software/api/repos/github/rkiman/wdwarfdate"}, {"uid": "github/miguelzuma/hi_class_public", "html_url": "https://rseng.github.io/software/repository/github/miguelzuma/hi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/miguelzuma/hi_class_public"}, {"uid": "github/aarondotter/iso", "html_url": "https://rseng.github.io/software/repository/github/aarondotter/iso", "api_url": "https://rseng.github.io/software/api/repos/github/aarondotter/iso"}, {"uid": "github/erikbern/ann-benchmarks", "html_url": "https://rseng.github.io/software/repository/github/erikbern/ann-benchmarks", "api_url": "https://rseng.github.io/software/api/repos/github/erikbern/ann-benchmarks"}, {"uid": "github/pymc-devs/pymc3", "html_url": "https://rseng.github.io/software/repository/github/pymc-devs/pymc3", "api_url": "https://rseng.github.io/software/api/repos/github/pymc-devs/pymc3"}, {"uid": "github/wilsonrljr/sysidentpy", "html_url": "https://rseng.github.io/software/repository/github/wilsonrljr/sysidentpy", "api_url": "https://rseng.github.io/software/api/repos/github/wilsonrljr/sysidentpy"}, {"uid": "github/acil-bwh/bayes_traj", "html_url": "https://rseng.github.io/software/repository/github/acil-bwh/bayes_traj", "api_url": "https://rseng.github.io/software/api/repos/github/acil-bwh/bayes_traj"}, {"uid": "github/JEFworks-Lab/STdeconvolve", "html_url": "https://rseng.github.io/software/repository/github/JEFworks-Lab/STdeconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/JEFworks-Lab/STdeconvolve"}, {"uid": "github/jhparkastro/gpcal", "html_url": "https://rseng.github.io/software/repository/github/jhparkastro/gpcal", "api_url": "https://rseng.github.io/software/api/repos/github/jhparkastro/gpcal"}, {"uid": "github/virgesmith/neworder", "html_url": "https://rseng.github.io/software/repository/github/virgesmith/neworder", "api_url": "https://rseng.github.io/software/api/repos/github/virgesmith/neworder"}, {"uid": "github/fjdu/myRadex", "html_url": "https://rseng.github.io/software/repository/github/fjdu/myRadex", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/myRadex"}, {"uid": "github/fjdu/rac-2d", "html_url": "https://rseng.github.io/software/repository/github/fjdu/rac-2d", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/rac-2d"}, {"uid": "github/DFKI-NI/syclops", "html_url": "https://rseng.github.io/software/repository/github/DFKI-NI/syclops", "api_url": "https://rseng.github.io/software/api/repos/github/DFKI-NI/syclops"}, {"uid": "github/nci/scores", "html_url": "https://rseng.github.io/software/repository/github/nci/scores", "api_url": "https://rseng.github.io/software/api/repos/github/nci/scores"}, {"uid": "github/klho/FLAM", "html_url": "https://rseng.github.io/software/repository/github/klho/FLAM", "api_url": "https://rseng.github.io/software/api/repos/github/klho/FLAM"}, {"uid": "github/nsoranzo/sspace_basic", "html_url": "https://rseng.github.io/software/repository/github/nsoranzo/sspace_basic", "api_url": "https://rseng.github.io/software/api/repos/github/nsoranzo/sspace_basic"}, {"uid": "github/SMI/SmiServices", "html_url": "https://rseng.github.io/software/repository/github/SMI/SmiServices", "api_url": "https://rseng.github.io/software/api/repos/github/SMI/SmiServices"}, {"uid": "github/Ohervet/Bjet_MCMC", "html_url": "https://rseng.github.io/software/repository/github/Ohervet/Bjet_MCMC", "api_url": "https://rseng.github.io/software/api/repos/github/Ohervet/Bjet_MCMC"}, {"uid": "github/labsquare/CutePeaks", "html_url": "https://rseng.github.io/software/repository/github/labsquare/CutePeaks", "api_url": "https://rseng.github.io/software/api/repos/github/labsquare/CutePeaks"}, {"uid": "github/tpospisi/nnkcde", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/nnkcde", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/nnkcde"}, {"uid": "github/tpospisi/cdetools", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/cdetools", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/cdetools"}, {"uid": "github/tpospisi/RFCDE", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/RFCDE", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/RFCDE"}, {"uid": "github/ParaFly/ParaFly", "html_url": "https://rseng.github.io/software/repository/github/ParaFly/ParaFly", "api_url": "https://rseng.github.io/software/api/repos/github/ParaFly/ParaFly"}, {"uid": "github/davtsang/slimplectic", "html_url": "https://rseng.github.io/software/repository/github/davtsang/slimplectic", "api_url": "https://rseng.github.io/software/api/repos/github/davtsang/slimplectic"}, {"uid": "github/PolyChord/PolyChordLite", "html_url": "https://rseng.github.io/software/repository/github/PolyChord/PolyChordLite", "api_url": "https://rseng.github.io/software/api/repos/github/PolyChord/PolyChordLite"}, {"uid": "github/mgckind/SparsePz", "html_url": "https://rseng.github.io/software/repository/github/mgckind/SparsePz", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/SparsePz"}, {"uid": "github/mgckind/easyaccess", "html_url": "https://rseng.github.io/software/repository/github/mgckind/easyaccess", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/easyaccess"}, {"uid": "github/exoclime/THOR", "html_url": "https://rseng.github.io/software/repository/github/exoclime/THOR", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/THOR"}, {"uid": "github/exoclime/VULCAN", "html_url": "https://rseng.github.io/software/repository/github/exoclime/VULCAN", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/VULCAN"}, {"uid": "github/exoclime/HELA", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELA", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELA"}, {"uid": "github/exoclime/HELIOS", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS"}, {"uid": "github/exoclime/HELIOS-K", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS-K", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS-K"}, {"uid": "github/exoclime/Helios-r2", "html_url": "https://rseng.github.io/software/repository/github/exoclime/Helios-r2", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/Helios-r2"}, {"uid": "github/exoclime/FastChem", "html_url": "https://rseng.github.io/software/repository/github/exoclime/FastChem", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/FastChem"}, {"uid": "github/Zafiirah13/meercrab", "html_url": "https://rseng.github.io/software/repository/github/Zafiirah13/meercrab", "api_url": "https://rseng.github.io/software/api/repos/github/Zafiirah13/meercrab"}, {"uid": "github/Huracan-project/huracanpy", "html_url": "https://rseng.github.io/software/repository/github/Huracan-project/huracanpy", "api_url": "https://rseng.github.io/software/api/repos/github/Huracan-project/huracanpy"}, {"uid": "github/AutoResearch/sweetbean", "html_url": "https://rseng.github.io/software/repository/github/AutoResearch/sweetbean", "api_url": "https://rseng.github.io/software/api/repos/github/AutoResearch/sweetbean"}, {"uid": "github/kristiantcho/flashcurve", "html_url": "https://rseng.github.io/software/repository/github/kristiantcho/flashcurve", "api_url": "https://rseng.github.io/software/api/repos/github/kristiantcho/flashcurve"}, {"uid": "github/Singh-Lab/uKIN", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/uKIN", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/uKIN"}, {"uid": "github/Singh-Lab/DeMaSk", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/DeMaSk", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/DeMaSk"}, {"uid": "github/liuhong-jia/scAnno", "html_url": "https://rseng.github.io/software/repository/github/liuhong-jia/scAnno", "api_url": "https://rseng.github.io/software/api/repos/github/liuhong-jia/scAnno"}, {"uid": "github/EpistasisLab/regens", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/regens", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/regens"}, {"uid": "github/EpistasisLab/tpot", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/tpot", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/tpot"}, {"uid": "github/mind-inria/mri-nufft", "html_url": "https://rseng.github.io/software/repository/github/mind-inria/mri-nufft", "api_url": "https://rseng.github.io/software/api/repos/github/mind-inria/mri-nufft"}, {"uid": "github/gotsunami/Youpi", "html_url": "https://rseng.github.io/software/repository/github/gotsunami/Youpi", "api_url": "https://rseng.github.io/software/api/repos/github/gotsunami/Youpi"}, {"uid": "github/shikhar249/OnionMHC", "html_url": "https://rseng.github.io/software/repository/github/shikhar249/OnionMHC", "api_url": "https://rseng.github.io/software/api/repos/github/shikhar249/OnionMHC"}, {"uid": "github/IBM/topography-searcher", "html_url": "https://rseng.github.io/software/repository/github/IBM/topography-searcher", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/topography-searcher"}, {"uid": "github/IBM/fold2seq", "html_url": "https://rseng.github.io/software/repository/github/IBM/fold2seq", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/fold2seq"}, {"uid": "github/RuthAngus/SIPK2", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/SIPK2", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/SIPK2"}, {"uid": "github/RuthAngus/stardate", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/stardate", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/stardate"}, {"uid": "github/RuthAngus/gprotation", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/gprotation", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/gprotation"}, {"uid": "github/AbeelLab/lorikeet", "html_url": "https://rseng.github.io/software/repository/github/AbeelLab/lorikeet", "api_url": "https://rseng.github.io/software/api/repos/github/AbeelLab/lorikeet"}, {"uid": "github/Extraweich/homopy", "html_url": "https://rseng.github.io/software/repository/github/Extraweich/homopy", "api_url": "https://rseng.github.io/software/api/repos/github/Extraweich/homopy"}, {"uid": "github/SotaYoshida/NuclearToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/SotaYoshida/NuclearToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SotaYoshida/NuclearToolkit.jl"}, {"uid": "github/sbraden/circle-craters", "html_url": "https://rseng.github.io/software/repository/github/sbraden/circle-craters", "api_url": "https://rseng.github.io/software/api/repos/github/sbraden/circle-craters"}, {"uid": "github/glotzerlab/hoomd-blue", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/hoomd-blue", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/hoomd-blue"}, {"uid": "github/glotzerlab/coxeter", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/coxeter", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/coxeter"}, {"uid": "github/glotzerlab/freud", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/freud", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/freud"}, {"uid": "github/plumed/plumed2", "html_url": "https://rseng.github.io/software/repository/github/plumed/plumed2", "api_url": "https://rseng.github.io/software/api/repos/github/plumed/plumed2"}, {"uid": "github/lengoctram/DustPOL-py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL-py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL-py"}, {"uid": "github/lengoctram/DustPOL_py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL_py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL_py"}, {"uid": "github/parklab/LiRA", "html_url": "https://rseng.github.io/software/repository/github/parklab/LiRA", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/LiRA"}, {"uid": "github/parklab/SCAN2", "html_url": "https://rseng.github.io/software/repository/github/parklab/SCAN2", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/SCAN2"}, {"uid": "github/an0wen/MARDIGRAS", "html_url": "https://rseng.github.io/software/repository/github/an0wen/MARDIGRAS", "api_url": "https://rseng.github.io/software/api/repos/github/an0wen/MARDIGRAS"}, {"uid": "github/bbbbbbzhou/MDPET", "html_url": "https://rseng.github.io/software/repository/github/bbbbbbzhou/MDPET", "api_url": "https://rseng.github.io/software/api/repos/github/bbbbbbzhou/MDPET"}, {"uid": "github/sensein/etelemetry-client", "html_url": "https://rseng.github.io/software/repository/github/sensein/etelemetry-client", "api_url": "https://rseng.github.io/software/api/repos/github/sensein/etelemetry-client"}, {"uid": "github/bpp/bpp", "html_url": "https://rseng.github.io/software/repository/github/bpp/bpp", "api_url": "https://rseng.github.io/software/api/repos/github/bpp/bpp"}, {"uid": "github/CATG-Github/panscan", "html_url": "https://rseng.github.io/software/repository/github/CATG-Github/panscan", "api_url": "https://rseng.github.io/software/api/repos/github/CATG-Github/panscan"}, {"uid": "github/goharbor/harbor", "html_url": "https://rseng.github.io/software/repository/github/goharbor/harbor", "api_url": "https://rseng.github.io/software/api/repos/github/goharbor/harbor"}, {"uid": "github/luntergroup/octopus", "html_url": "https://rseng.github.io/software/repository/github/luntergroup/octopus", "api_url": "https://rseng.github.io/software/api/repos/github/luntergroup/octopus"}, {"uid": "github/dynamics-of-stellar-systems/dynamite_release", "html_url": "https://rseng.github.io/software/repository/github/dynamics-of-stellar-systems/dynamite_release", "api_url": "https://rseng.github.io/software/api/repos/github/dynamics-of-stellar-systems/dynamite_release"}, {"uid": "github/pmkruyen/dearscholar", "html_url": "https://rseng.github.io/software/repository/github/pmkruyen/dearscholar", "api_url": "https://rseng.github.io/software/api/repos/github/pmkruyen/dearscholar"}, {"uid": "github/CajoterBraak/demc2", "html_url": "https://rseng.github.io/software/repository/github/CajoterBraak/demc2", "api_url": "https://rseng.github.io/software/api/repos/github/CajoterBraak/demc2"}, {"uid": "github/MikeSWang/Harmonia", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Harmonia", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Harmonia"}, {"uid": "github/MikeSWang/Triumvirate", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Triumvirate", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Triumvirate"}, {"uid": "github/MikeSWang/HorizonGRound", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/HorizonGRound", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/HorizonGRound"}, {"uid": "github/mishioo/tesliper", "html_url": "https://rseng.github.io/software/repository/github/mishioo/tesliper", "api_url": "https://rseng.github.io/software/api/repos/github/mishioo/tesliper"}, {"uid": "github/sidiwang/snSMART", "html_url": "https://rseng.github.io/software/repository/github/sidiwang/snSMART", "api_url": "https://rseng.github.io/software/api/repos/github/sidiwang/snSMART"}, {"uid": "github/Siegel-Lab/BioSmoother", "html_url": "https://rseng.github.io/software/repository/github/Siegel-Lab/BioSmoother", "api_url": "https://rseng.github.io/software/api/repos/github/Siegel-Lab/BioSmoother"}, {"uid": "github/csb5/lofreq", "html_url": "https://rseng.github.io/software/repository/github/csb5/lofreq", "api_url": "https://rseng.github.io/software/api/repos/github/csb5/lofreq"}, {"uid": "github/ipython/ipython", "html_url": "https://rseng.github.io/software/repository/github/ipython/ipython", "api_url": "https://rseng.github.io/software/api/repos/github/ipython/ipython"}, {"uid": "github/SESMG/SESMG", "html_url": "https://rseng.github.io/software/repository/github/SESMG/SESMG", "api_url": "https://rseng.github.io/software/api/repos/github/SESMG/SESMG"}, {"uid": "github/ChrisBeaumont/brut", "html_url": "https://rseng.github.io/software/repository/github/ChrisBeaumont/brut", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBeaumont/brut"}, {"uid": "github/nipy/heudiconv", "html_url": "https://rseng.github.io/software/repository/github/nipy/heudiconv", "api_url": "https://rseng.github.io/software/api/repos/github/nipy/heudiconv"}, {"uid": "github/LindleyLentati/TempoNest", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/TempoNest", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/TempoNest"}, {"uid": "github/LindleyLentati/Cobra", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/Cobra", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/Cobra"}, {"uid": "github/aabdurrouf/piXedfit", "html_url": "https://rseng.github.io/software/repository/github/aabdurrouf/piXedfit", "api_url": "https://rseng.github.io/software/api/repos/github/aabdurrouf/piXedfit"}, {"uid": "github/NarlikarLab/exoDIVERSITY", "html_url": "https://rseng.github.io/software/repository/github/NarlikarLab/exoDIVERSITY", "api_url": "https://rseng.github.io/software/api/repos/github/NarlikarLab/exoDIVERSITY"}, {"uid": "github/jcorbino/mole", "html_url": "https://rseng.github.io/software/repository/github/jcorbino/mole", "api_url": "https://rseng.github.io/software/api/repos/github/jcorbino/mole"}, {"uid": "github/fkoehlin/montepython_2cosmos_public", "html_url": "https://rseng.github.io/software/repository/github/fkoehlin/montepython_2cosmos_public", "api_url": "https://rseng.github.io/software/api/repos/github/fkoehlin/montepython_2cosmos_public"}, {"uid": "github/aroffringa/aartfaac2ms", "html_url": "https://rseng.github.io/software/repository/github/aroffringa/aartfaac2ms", "api_url": "https://rseng.github.io/software/api/repos/github/aroffringa/aartfaac2ms"}, {"uid": "github/vishwas1984/LaplaceInterpolation.jl", "html_url": "https://rseng.github.io/software/repository/github/vishwas1984/LaplaceInterpolation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vishwas1984/LaplaceInterpolation.jl"}, {"uid": "github/scikit-tda/DREiMac", "html_url": "https://rseng.github.io/software/repository/github/scikit-tda/DREiMac", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-tda/DREiMac"}, {"uid": "github/lnscan/mitoSplitter", "html_url": "https://rseng.github.io/software/repository/github/lnscan/mitoSplitter", "api_url": "https://rseng.github.io/software/api/repos/github/lnscan/mitoSplitter"}, {"uid": "github/daissi/thesias", "html_url": "https://rseng.github.io/software/repository/github/daissi/thesias", "api_url": "https://rseng.github.io/software/api/repos/github/daissi/thesias"}, {"uid": "github/ezer/PAFway", "html_url": "https://rseng.github.io/software/repository/github/ezer/PAFway", "api_url": "https://rseng.github.io/software/api/repos/github/ezer/PAFway"}, {"uid": "github/cosmo-ethz/hide", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/hide", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/hide"}, {"uid": "github/cosmo-ethz/seek", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/seek", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/seek"}, {"uid": "github/cosmo-ethz/CosmoHammer", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/CosmoHammer", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/CosmoHammer"}, {"uid": "github/CPM-project/MCPM", "html_url": "https://rseng.github.io/software/repository/github/CPM-project/MCPM", "api_url": "https://rseng.github.io/software/api/repos/github/CPM-project/MCPM"}, {"uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", "html_url": "https://rseng.github.io/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", "api_url": "https://rseng.github.io/software/api/repos/github/Critical-Infrastructure-Systems-Lab/PowNet"}, {"uid": "github/amiralih/MembraneAnalysis.jl", "html_url": "https://rseng.github.io/software/repository/github/amiralih/MembraneAnalysis.jl", "api_url": "https://rseng.github.io/software/api/repos/github/amiralih/MembraneAnalysis.jl"}, {"uid": "github/AlgoLab/shark", "html_url": "https://rseng.github.io/software/repository/github/AlgoLab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/AlgoLab/shark"}, {"uid": "github/MesserLab/SLiM", "html_url": "https://rseng.github.io/software/repository/github/MesserLab/SLiM", "api_url": "https://rseng.github.io/software/api/repos/github/MesserLab/SLiM"}, {"uid": "github/ECSHackWeek/impedance.py", "html_url": "https://rseng.github.io/software/repository/github/ECSHackWeek/impedance.py", "api_url": "https://rseng.github.io/software/api/repos/github/ECSHackWeek/impedance.py"}, {"uid": "github/bio-phys/asyncmd", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/asyncmd", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/asyncmd"}, {"uid": "github/bio-phys/BioEn", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/BioEn", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/BioEn"}, {"uid": "github/lgrcia/nuance", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/nuance", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/nuance"}, {"uid": "github/lgrcia/prose", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/prose", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/prose"}, {"uid": "github/nansencenter/DAPPER", "html_url": "https://rseng.github.io/software/repository/github/nansencenter/DAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/nansencenter/DAPPER"}, {"uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", "html_url": "https://rseng.github.io/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/IlianPihlajamaa/ModeCouplingTheory.jl"}, {"uid": "github/nyusngroup/pyMCZ", "html_url": "https://rseng.github.io/software/repository/github/nyusngroup/pyMCZ", "api_url": "https://rseng.github.io/software/api/repos/github/nyusngroup/pyMCZ"}, {"uid": "github/itpplasma/GORILLA", "html_url": "https://rseng.github.io/software/repository/github/itpplasma/GORILLA", "api_url": "https://rseng.github.io/software/api/repos/github/itpplasma/GORILLA"}, {"uid": "github/darioizzo/dcgp", "html_url": "https://rseng.github.io/software/repository/github/darioizzo/dcgp", "api_url": "https://rseng.github.io/software/api/repos/github/darioizzo/dcgp"}, {"uid": "github/WhaleConnect/whaleconnect", "html_url": "https://rseng.github.io/software/repository/github/WhaleConnect/whaleconnect", "api_url": "https://rseng.github.io/software/api/repos/github/WhaleConnect/whaleconnect"}, {"uid": "github/kcleal/gw", "html_url": "https://rseng.github.io/software/repository/github/kcleal/gw", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/gw"}, {"uid": "github/kcleal/dysgu", "html_url": "https://rseng.github.io/software/repository/github/kcleal/dysgu", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/dysgu"}, {"uid": "github/mikejohnson51/AHGestimation", "html_url": "https://rseng.github.io/software/repository/github/mikejohnson51/AHGestimation", "api_url": "https://rseng.github.io/software/api/repos/github/mikejohnson51/AHGestimation"}, {"uid": "github/RiccardoBiondi/segmentation", "html_url": "https://rseng.github.io/software/repository/github/RiccardoBiondi/segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/RiccardoBiondi/segmentation"}, {"uid": "github/pedro-acunha/SHEEP", "html_url": "https://rseng.github.io/software/repository/github/pedro-acunha/SHEEP", "api_url": "https://rseng.github.io/software/api/repos/github/pedro-acunha/SHEEP"}, {"uid": "github/TommasoRonconi/scampy", "html_url": "https://rseng.github.io/software/repository/github/TommasoRonconi/scampy", "api_url": "https://rseng.github.io/software/api/repos/github/TommasoRonconi/scampy"}, {"uid": "github/hyex-research/AquaFetch", "html_url": "https://rseng.github.io/software/repository/github/hyex-research/AquaFetch", "api_url": "https://rseng.github.io/software/api/repos/github/hyex-research/AquaFetch"}, {"uid": "github/DavidT3/DAXA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/DAXA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/DAXA"}, {"uid": "github/DavidT3/XGA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/XGA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/XGA"}, {"uid": "github/denglab/SeqSero", "html_url": "https://rseng.github.io/software/repository/github/denglab/SeqSero", "api_url": "https://rseng.github.io/software/api/repos/github/denglab/SeqSero"}, {"uid": "github/jmejia8/Metaheuristics.jl", "html_url": "https://rseng.github.io/software/repository/github/jmejia8/Metaheuristics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jmejia8/Metaheuristics.jl"}, {"uid": "github/ixakalabadie/ViSL3D", "html_url": "https://rseng.github.io/software/repository/github/ixakalabadie/ViSL3D", "api_url": "https://rseng.github.io/software/api/repos/github/ixakalabadie/ViSL3D"}, {"uid": "github/UCD4IDS/WaveletsExt.jl", "html_url": "https://rseng.github.io/software/repository/github/UCD4IDS/WaveletsExt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UCD4IDS/WaveletsExt.jl"}, {"uid": "github/morrowcj/remotePARTS", "html_url": "https://rseng.github.io/software/repository/github/morrowcj/remotePARTS", "api_url": "https://rseng.github.io/software/api/repos/github/morrowcj/remotePARTS"}, {"uid": "github/esheldon/ngmix", "html_url": "https://rseng.github.io/software/repository/github/esheldon/ngmix", "api_url": "https://rseng.github.io/software/api/repos/github/esheldon/ngmix"}, {"uid": "github/PavlidisLab/Gemma", "html_url": "https://rseng.github.io/software/repository/github/PavlidisLab/Gemma", "api_url": "https://rseng.github.io/software/api/repos/github/PavlidisLab/Gemma"}, {"uid": "github/abaleato/CARDiAC", "html_url": "https://rseng.github.io/software/repository/github/abaleato/CARDiAC", "api_url": "https://rseng.github.io/software/api/repos/github/abaleato/CARDiAC"}, {"uid": "github/russelllab/wesa", "html_url": "https://rseng.github.io/software/repository/github/russelllab/wesa", "api_url": "https://rseng.github.io/software/api/repos/github/russelllab/wesa"}, {"uid": "github/RBrearton/islatu", "html_url": "https://rseng.github.io/software/repository/github/RBrearton/islatu", "api_url": "https://rseng.github.io/software/api/repos/github/RBrearton/islatu"}, {"uid": "github/idruglab/hignn", "html_url": "https://rseng.github.io/software/repository/github/idruglab/hignn", "api_url": "https://rseng.github.io/software/api/repos/github/idruglab/hignn"}, {"uid": "github/Hyperthetical/DarkMatters", "html_url": "https://rseng.github.io/software/repository/github/Hyperthetical/DarkMatters", "api_url": "https://rseng.github.io/software/api/repos/github/Hyperthetical/DarkMatters"}, {"uid": "github/AlexandrosAntoniadis/ODUSSEAS", "html_url": "https://rseng.github.io/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", "api_url": "https://rseng.github.io/software/api/repos/github/AlexandrosAntoniadis/ODUSSEAS"}, {"uid": "github/sonoUnoTeam/sonoUno-desktop", "html_url": "https://rseng.github.io/software/repository/github/sonoUnoTeam/sonoUno-desktop", "api_url": "https://rseng.github.io/software/api/repos/github/sonoUnoTeam/sonoUno-desktop"}, {"uid": "github/benstahl92/deepSIP", "html_url": "https://rseng.github.io/software/repository/github/benstahl92/deepSIP", "api_url": "https://rseng.github.io/software/api/repos/github/benstahl92/deepSIP"}, {"uid": "github/kungfugo/BellDiagonalQudits.jl", "html_url": "https://rseng.github.io/software/repository/github/kungfugo/BellDiagonalQudits.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kungfugo/BellDiagonalQudits.jl"}, {"uid": "github/libgamera/GAMERA", "html_url": "https://rseng.github.io/software/repository/github/libgamera/GAMERA", "api_url": "https://rseng.github.io/software/api/repos/github/libgamera/GAMERA"}, {"uid": "github/baoxingsong/AnchorWave", "html_url": "https://rseng.github.io/software/repository/github/baoxingsong/AnchorWave", "api_url": "https://rseng.github.io/software/api/repos/github/baoxingsong/AnchorWave"}, {"uid": "github/Bioinformatics-Munich/scas_dashboard", "html_url": "https://rseng.github.io/software/repository/github/Bioinformatics-Munich/scas_dashboard", "api_url": "https://rseng.github.io/software/api/repos/github/Bioinformatics-Munich/scas_dashboard"}, {"uid": "github/robbievanleeuwen/section-properties", "html_url": "https://rseng.github.io/software/repository/github/robbievanleeuwen/section-properties", "api_url": "https://rseng.github.io/software/api/repos/github/robbievanleeuwen/section-properties"}, {"uid": "github/gui11aume/starcode", "html_url": "https://rseng.github.io/software/repository/github/gui11aume/starcode", "api_url": "https://rseng.github.io/software/api/repos/github/gui11aume/starcode"}, {"uid": "github/akcochrane/TEfits", "html_url": "https://rseng.github.io/software/repository/github/akcochrane/TEfits", "api_url": "https://rseng.github.io/software/api/repos/github/akcochrane/TEfits"}, {"uid": "github/pec27/hfof", "html_url": "https://rseng.github.io/software/repository/github/pec27/hfof", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/hfof"}, {"uid": "github/pec27/lizard", "html_url": "https://rseng.github.io/software/repository/github/pec27/lizard", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/lizard"}, {"uid": "github/pec27/smerfs", "html_url": "https://rseng.github.io/software/repository/github/pec27/smerfs", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/smerfs"}, {"uid": "github/agree019/DarkCapPy", "html_url": "https://rseng.github.io/software/repository/github/agree019/DarkCapPy", "api_url": "https://rseng.github.io/software/api/repos/github/agree019/DarkCapPy"}, {"uid": "github/JulioHC00/PEPITA", "html_url": "https://rseng.github.io/software/repository/github/JulioHC00/PEPITA", "api_url": "https://rseng.github.io/software/api/repos/github/JulioHC00/PEPITA"}, {"uid": "github/SISPO-developers/sispo", "html_url": "https://rseng.github.io/software/repository/github/SISPO-developers/sispo", "api_url": "https://rseng.github.io/software/api/repos/github/SISPO-developers/sispo"}, {"uid": "github/umbramortem/nProFit", "html_url": "https://rseng.github.io/software/repository/github/umbramortem/nProFit", "api_url": "https://rseng.github.io/software/api/repos/github/umbramortem/nProFit"}, {"uid": "github/hoechenberger/questplus", "html_url": "https://rseng.github.io/software/repository/github/hoechenberger/questplus", "api_url": "https://rseng.github.io/software/api/repos/github/hoechenberger/questplus"}, {"uid": "github/avigan/SPHERE", "html_url": "https://rseng.github.io/software/repository/github/avigan/SPHERE", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/SPHERE"}, {"uid": "github/avigan/pyZELDA", "html_url": "https://rseng.github.io/software/repository/github/avigan/pyZELDA", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/pyZELDA"}, {"uid": "github/JetBrains-Research/spbla", "html_url": "https://rseng.github.io/software/repository/github/JetBrains-Research/spbla", "api_url": "https://rseng.github.io/software/api/repos/github/JetBrains-Research/spbla"}, {"uid": "github/MariaTsantaki/FASMA-synthesis", "html_url": "https://rseng.github.io/software/repository/github/MariaTsantaki/FASMA-synthesis", "api_url": "https://rseng.github.io/software/api/repos/github/MariaTsantaki/FASMA-synthesis"}, {"uid": "github/johncwok/CategoricalTimeSeries.jl", "html_url": "https://rseng.github.io/software/repository/github/johncwok/CategoricalTimeSeries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/johncwok/CategoricalTimeSeries.jl"}, {"uid": "github/edgardomortiz/Captus", "html_url": "https://rseng.github.io/software/repository/github/edgardomortiz/Captus", "api_url": "https://rseng.github.io/software/api/repos/github/edgardomortiz/Captus"}, {"uid": "github/creaneroDIAS/beamModelTester", "html_url": "https://rseng.github.io/software/repository/github/creaneroDIAS/beamModelTester", "api_url": "https://rseng.github.io/software/api/repos/github/creaneroDIAS/beamModelTester"}, {"uid": "github/profjsb/deepCR", "html_url": "https://rseng.github.io/software/repository/github/profjsb/deepCR", "api_url": "https://rseng.github.io/software/api/repos/github/profjsb/deepCR"}, {"uid": "github/gdrouart/MrMoose", "html_url": "https://rseng.github.io/software/repository/github/gdrouart/MrMoose", "api_url": "https://rseng.github.io/software/api/repos/github/gdrouart/MrMoose"}, {"uid": "github/introlab/opentera", "html_url": "https://rseng.github.io/software/repository/github/introlab/opentera", "api_url": "https://rseng.github.io/software/api/repos/github/introlab/opentera"}, {"uid": "github/tqsd/photon_weave", "html_url": "https://rseng.github.io/software/repository/github/tqsd/photon_weave", "api_url": "https://rseng.github.io/software/api/repos/github/tqsd/photon_weave"}, {"uid": "github/bioinfodlsu/phage-host-prediction", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/phage-host-prediction", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/phage-host-prediction"}, {"uid": "github/bioinfodlsu/PHIStruct", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/PHIStruct", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/PHIStruct"}, {"uid": "github/WSWUP/agweather-qaqc", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/agweather-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/agweather-qaqc"}, {"uid": "github/WSWUP/gridwxcomp", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/gridwxcomp", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/gridwxcomp"}, {"uid": "github/wonderful1/CNV-PG", "html_url": "https://rseng.github.io/software/repository/github/wonderful1/CNV-PG", "api_url": "https://rseng.github.io/software/api/repos/github/wonderful1/CNV-PG"}, {"uid": "github/insilico/cncv", "html_url": "https://rseng.github.io/software/repository/github/insilico/cncv", "api_url": "https://rseng.github.io/software/api/repos/github/insilico/cncv"}, {"uid": "github/jteutenberg/downpore", "html_url": "https://rseng.github.io/software/repository/github/jteutenberg/downpore", "api_url": "https://rseng.github.io/software/api/repos/github/jteutenberg/downpore"}, {"uid": "github/QEF/q-e", "html_url": "https://rseng.github.io/software/repository/github/QEF/q-e", "api_url": "https://rseng.github.io/software/api/repos/github/QEF/q-e"}, {"uid": "github/subisarkar/JexoSim", "html_url": "https://rseng.github.io/software/repository/github/subisarkar/JexoSim", "api_url": "https://rseng.github.io/software/api/repos/github/subisarkar/JexoSim"}, {"uid": "github/ericsteinbring/World_Observatory", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/World_Observatory", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/World_Observatory"}, {"uid": "github/ericsteinbring/Special-Blurring", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/Special-Blurring", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/Special-Blurring"}, {"uid": "github/ericsteinbring/PDQ", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/PDQ", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/PDQ"}, {"uid": "github/sheinasim/HiFiAdapterFilt", "html_url": "https://rseng.github.io/software/repository/github/sheinasim/HiFiAdapterFilt", "api_url": "https://rseng.github.io/software/api/repos/github/sheinasim/HiFiAdapterFilt"}, {"uid": "github/mmore500/hstrat", "html_url": "https://rseng.github.io/software/repository/github/mmore500/hstrat", "api_url": "https://rseng.github.io/software/api/repos/github/mmore500/hstrat"}, {"uid": "github/Cambridge-ICCS/FTorch", "html_url": "https://rseng.github.io/software/repository/github/Cambridge-ICCS/FTorch", "api_url": "https://rseng.github.io/software/api/repos/github/Cambridge-ICCS/FTorch"}, {"uid": "github/CTU-Bern/presize", "html_url": "https://rseng.github.io/software/repository/github/CTU-Bern/presize", "api_url": "https://rseng.github.io/software/api/repos/github/CTU-Bern/presize"}, {"uid": "github/sybila/biodivine-aeon-py", "html_url": "https://rseng.github.io/software/repository/github/sybila/biodivine-aeon-py", "api_url": "https://rseng.github.io/software/api/repos/github/sybila/biodivine-aeon-py"}, {"uid": "github/murphycj/AGFusion", "html_url": "https://rseng.github.io/software/repository/github/murphycj/AGFusion", "api_url": "https://rseng.github.io/software/api/repos/github/murphycj/AGFusion"}, {"uid": "github/rmaphoh/AutoMorph", "html_url": "https://rseng.github.io/software/repository/github/rmaphoh/AutoMorph", "api_url": "https://rseng.github.io/software/api/repos/github/rmaphoh/AutoMorph"}, {"uid": "github/shihyuntang/igrins_rv", "html_url": "https://rseng.github.io/software/repository/github/shihyuntang/igrins_rv", "api_url": "https://rseng.github.io/software/api/repos/github/shihyuntang/igrins_rv"}, {"uid": "github/Gaius-Augustus/GALBA", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/GALBA", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/GALBA"}, {"uid": "github/Gaius-Augustus/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/Tiberius"}, {"uid": "github/Gaius-Augustus/BRAKER", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/BRAKER", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/BRAKER"}, {"uid": "github/Computational-NeuroGenetics/deMeta-beta", "html_url": "https://rseng.github.io/software/repository/github/Computational-NeuroGenetics/deMeta-beta", "api_url": "https://rseng.github.io/software/api/repos/github/Computational-NeuroGenetics/deMeta-beta"}, {"uid": "github/vgteam/vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg"}, {"uid": "github/vgteam/vg#vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg#vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg#vg"}, {"uid": "github/RandyRDavila/GraphCalc", "html_url": "https://rseng.github.io/software/repository/github/RandyRDavila/GraphCalc", "api_url": "https://rseng.github.io/software/api/repos/github/RandyRDavila/GraphCalc"}, {"uid": "github/palaimon/ipyannotator", "html_url": "https://rseng.github.io/software/repository/github/palaimon/ipyannotator", "api_url": "https://rseng.github.io/software/api/repos/github/palaimon/ipyannotator"}, {"uid": "github/tortellini-tools/action", "html_url": "https://rseng.github.io/software/repository/github/tortellini-tools/action", "api_url": "https://rseng.github.io/software/api/repos/github/tortellini-tools/action"}, {"uid": "github/lbr-stack/lbr_stack_doc", "html_url": "https://rseng.github.io/software/repository/github/lbr-stack/lbr_stack_doc", "api_url": "https://rseng.github.io/software/api/repos/github/lbr-stack/lbr_stack_doc"}, {"uid": "github/elixir-luxembourg/daisy", "html_url": "https://rseng.github.io/software/repository/github/elixir-luxembourg/daisy", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-luxembourg/daisy"}, {"uid": "github/geckos-survey/ngist", "html_url": "https://rseng.github.io/software/repository/github/geckos-survey/ngist", "api_url": "https://rseng.github.io/software/api/repos/github/geckos-survey/ngist"}, {"uid": "github/yuliang419/AstroNet-Triage", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Triage", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Triage"}, {"uid": "github/yuliang419/AstroNet-Vetting", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Vetting", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Vetting"}, {"uid": "github/geospace-code/h5fortran", "html_url": "https://rseng.github.io/software/repository/github/geospace-code/h5fortran", "api_url": "https://rseng.github.io/software/api/repos/github/geospace-code/h5fortran"}, {"uid": "github/felixchenier/kineticstoolkit", "html_url": "https://rseng.github.io/software/repository/github/felixchenier/kineticstoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/felixchenier/kineticstoolkit"}, {"uid": "github/bccp/nbodykit", "html_url": "https://rseng.github.io/software/repository/github/bccp/nbodykit", "api_url": "https://rseng.github.io/software/api/repos/github/bccp/nbodykit"}, {"uid": "github/TeaspoonTDA/teaspoon", "html_url": "https://rseng.github.io/software/repository/github/TeaspoonTDA/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/github/TeaspoonTDA/teaspoon"}, {"uid": "github/BobChallen/Basic-mzml-plotter", "html_url": "https://rseng.github.io/software/repository/github/BobChallen/Basic-mzml-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/BobChallen/Basic-mzml-plotter"}, {"uid": "github/AusSRC/SoFiAX", "html_url": "https://rseng.github.io/software/repository/github/AusSRC/SoFiAX", "api_url": "https://rseng.github.io/software/api/repos/github/AusSRC/SoFiAX"}, {"uid": "github/zhwm/SparsePro_Paper", "html_url": "https://rseng.github.io/software/repository/github/zhwm/SparsePro_Paper", "api_url": "https://rseng.github.io/software/api/repos/github/zhwm/SparsePro_Paper"}, {"uid": "github/ParBLiSS/FastANI", "html_url": "https://rseng.github.io/software/repository/github/ParBLiSS/FastANI", "api_url": "https://rseng.github.io/software/api/repos/github/ParBLiSS/FastANI"}, {"uid": "github/hamers/tpi", "html_url": "https://rseng.github.io/software/repository/github/hamers/tpi", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/tpi"}, {"uid": "github/hamers/secularmultiple", "html_url": "https://rseng.github.io/software/repository/github/hamers/secularmultiple", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/secularmultiple"}, {"uid": "github/3d-pli/fastpli", "html_url": "https://rseng.github.io/software/repository/github/3d-pli/fastpli", "api_url": "https://rseng.github.io/software/api/repos/github/3d-pli/fastpli"}, {"uid": "github/Lbalkenhol/candl", "html_url": "https://rseng.github.io/software/repository/github/Lbalkenhol/candl", "api_url": "https://rseng.github.io/software/api/repos/github/Lbalkenhol/candl"}, {"uid": "github/voting-tools/pref_voting", "html_url": "https://rseng.github.io/software/repository/github/voting-tools/pref_voting", "api_url": "https://rseng.github.io/software/api/repos/github/voting-tools/pref_voting"}, {"uid": "github/bluenote-1577/fairy", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/fairy", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/fairy"}, {"uid": "github/bluenote-1577/sylph", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/sylph", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/sylph"}, {"uid": "github/aibhleog/baryon-sweep", "html_url": "https://rseng.github.io/software/repository/github/aibhleog/baryon-sweep", "api_url": "https://rseng.github.io/software/api/repos/github/aibhleog/baryon-sweep"}, {"uid": "github/percolator/percolator", "html_url": "https://rseng.github.io/software/repository/github/percolator/percolator", "api_url": "https://rseng.github.io/software/api/repos/github/percolator/percolator"}, {"uid": "github/igvteam/igv-reports", "html_url": "https://rseng.github.io/software/repository/github/igvteam/igv-reports", "api_url": "https://rseng.github.io/software/api/repos/github/igvteam/igv-reports"}, {"uid": "github/octopus-sensing/octopus-sensing", "html_url": "https://rseng.github.io/software/repository/github/octopus-sensing/octopus-sensing", "api_url": "https://rseng.github.io/software/api/repos/github/octopus-sensing/octopus-sensing"}, {"uid": "github/fwhigh/stellar-locus-regression", "html_url": "https://rseng.github.io/software/repository/github/fwhigh/stellar-locus-regression", "api_url": "https://rseng.github.io/software/api/repos/github/fwhigh/stellar-locus-regression"}, {"uid": "github/PathoGenOmics-Lab/get_mnv", "html_url": "https://rseng.github.io/software/repository/github/PathoGenOmics-Lab/get_mnv", "api_url": "https://rseng.github.io/software/api/repos/github/PathoGenOmics-Lab/get_mnv"}, {"uid": "github/ketch/RK-Opt", "html_url": "https://rseng.github.io/software/repository/github/ketch/RK-Opt", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/RK-Opt"}, {"uid": "github/ketch/nodepy", "html_url": "https://rseng.github.io/software/repository/github/ketch/nodepy", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/nodepy"}, {"uid": "github/citation-file-format/cffconvert-github-action", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cffconvert-github-action", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cffconvert-github-action"}, {"uid": "github/citation-file-format/citation-file-format", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/citation-file-format", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/citation-file-format"}, {"uid": "github/citation-file-format/cff-initializer-javascript", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-initializer-javascript", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-initializer-javascript"}, {"uid": "github/citation-file-format/cff-converter-python", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-converter-python", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-converter-python"}, {"uid": "github/e-merlin/eMERLIN_CASA_pipeline", "html_url": "https://rseng.github.io/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/e-merlin/eMERLIN_CASA_pipeline"}, {"uid": "github/BASTAcode/BASTA", "html_url": "https://rseng.github.io/software/repository/github/BASTAcode/BASTA", "api_url": "https://rseng.github.io/software/api/repos/github/BASTAcode/BASTA"}, {"uid": "github/baiwenjia/ukbb_cardiac", "html_url": "https://rseng.github.io/software/repository/github/baiwenjia/ukbb_cardiac", "api_url": "https://rseng.github.io/software/api/repos/github/baiwenjia/ukbb_cardiac"}, {"uid": "github/AndreyTavleev/DiscVerSt", "html_url": "https://rseng.github.io/software/repository/github/AndreyTavleev/DiscVerSt", "api_url": "https://rseng.github.io/software/api/repos/github/AndreyTavleev/DiscVerSt"}, {"uid": "github/SwissClinicalTrialOrganisation/secuTrialR", "html_url": "https://rseng.github.io/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", "api_url": "https://rseng.github.io/software/api/repos/github/SwissClinicalTrialOrganisation/secuTrialR"}, {"uid": "github/shengjin/nii-c", "html_url": "https://rseng.github.io/software/repository/github/shengjin/nii-c", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/nii-c"}, {"uid": "github/shengjin/Nii", "html_url": "https://rseng.github.io/software/repository/github/shengjin/Nii", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/Nii"}, {"uid": "github/ndrakos/ICICLE", "html_url": "https://rseng.github.io/software/repository/github/ndrakos/ICICLE", "api_url": "https://rseng.github.io/software/api/repos/github/ndrakos/ICICLE"}, {"uid": "github/FAU-LAP/NOMAD-CAMELS", "html_url": "https://rseng.github.io/software/repository/github/FAU-LAP/NOMAD-CAMELS", "api_url": "https://rseng.github.io/software/api/repos/github/FAU-LAP/NOMAD-CAMELS"}, {"uid": "github/votca/xtp", "html_url": "https://rseng.github.io/software/repository/github/votca/xtp", "api_url": "https://rseng.github.io/software/api/repos/github/votca/xtp"}, {"uid": "github/dlinssen/sunbather", "html_url": "https://rseng.github.io/software/repository/github/dlinssen/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/dlinssen/sunbather"}, {"uid": "github/ahmedmagds/GNUVID", "html_url": "https://rseng.github.io/software/repository/github/ahmedmagds/GNUVID", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmagds/GNUVID"}, {"uid": "github/JieZheng-ShanghaiTech/PiLSL", "html_url": "https://rseng.github.io/software/repository/github/JieZheng-ShanghaiTech/PiLSL", "api_url": "https://rseng.github.io/software/api/repos/github/JieZheng-ShanghaiTech/PiLSL"}, {"uid": "github/greendw/AntabGMVA", "html_url": "https://rseng.github.io/software/repository/github/greendw/AntabGMVA", "api_url": "https://rseng.github.io/software/api/repos/github/greendw/AntabGMVA"}, {"uid": "github/carnival-data/carnival", "html_url": "https://rseng.github.io/software/repository/github/carnival-data/carnival", "api_url": "https://rseng.github.io/software/api/repos/github/carnival-data/carnival"}, {"uid": "github/zavolanlab/PAQR2", "html_url": "https://rseng.github.io/software/repository/github/zavolanlab/PAQR2", "api_url": "https://rseng.github.io/software/api/repos/github/zavolanlab/PAQR2"}, {"uid": "github/mrempel/geohexviz", "html_url": "https://rseng.github.io/software/repository/github/mrempel/geohexviz", "api_url": "https://rseng.github.io/software/api/repos/github/mrempel/geohexviz"}, {"uid": "github/flaminiafortuni/FORECAST", "html_url": "https://rseng.github.io/software/repository/github/flaminiafortuni/FORECAST", "api_url": "https://rseng.github.io/software/api/repos/github/flaminiafortuni/FORECAST"}, {"uid": "github/CQCL/qujax", "html_url": "https://rseng.github.io/software/repository/github/CQCL/qujax", "api_url": "https://rseng.github.io/software/api/repos/github/CQCL/qujax"}, {"uid": "github/stevenweaver/seqcomplexity", "html_url": "https://rseng.github.io/software/repository/github/stevenweaver/seqcomplexity", "api_url": "https://rseng.github.io/software/api/repos/github/stevenweaver/seqcomplexity"}, {"uid": "github/MDU-PHL/emmtyper", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/emmtyper", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/emmtyper"}, {"uid": "github/MDU-PHL/abritamr", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/abritamr", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/abritamr"}, {"uid": "github/aewallin/allantools", "html_url": "https://rseng.github.io/software/repository/github/aewallin/allantools", "api_url": "https://rseng.github.io/software/api/repos/github/aewallin/allantools"}, {"uid": "github/mentatpsi/OSGenome", "html_url": "https://rseng.github.io/software/repository/github/mentatpsi/OSGenome", "api_url": "https://rseng.github.io/software/api/repos/github/mentatpsi/OSGenome"}, {"uid": "github/redcap-tools/PyCap", "html_url": "https://rseng.github.io/software/repository/github/redcap-tools/PyCap", "api_url": "https://rseng.github.io/software/api/repos/github/redcap-tools/PyCap"}, {"uid": "github/meixichen/SpatialGEV", "html_url": "https://rseng.github.io/software/repository/github/meixichen/SpatialGEV", "api_url": "https://rseng.github.io/software/api/repos/github/meixichen/SpatialGEV"}, {"uid": "github/lucydot/effmass", "html_url": "https://rseng.github.io/software/repository/github/lucydot/effmass", "api_url": "https://rseng.github.io/software/api/repos/github/lucydot/effmass"}, {"uid": "github/nekStab/LightKrylov", "html_url": "https://rseng.github.io/software/repository/github/nekStab/LightKrylov", "api_url": "https://rseng.github.io/software/api/repos/github/nekStab/LightKrylov"}, {"uid": "github/Rhyd-Lewis/GCol", "html_url": "https://rseng.github.io/software/repository/github/Rhyd-Lewis/GCol", "api_url": "https://rseng.github.io/software/api/repos/github/Rhyd-Lewis/GCol"}, {"uid": "github/dmilakovic/QSOSIM10", "html_url": "https://rseng.github.io/software/repository/github/dmilakovic/QSOSIM10", "api_url": "https://rseng.github.io/software/api/repos/github/dmilakovic/QSOSIM10"}, {"uid": "github/JASHunt/Snapdragons", "html_url": "https://rseng.github.io/software/repository/github/JASHunt/Snapdragons", "api_url": "https://rseng.github.io/software/api/repos/github/JASHunt/Snapdragons"}, {"uid": "github/sncosmo/sncosmo", "html_url": "https://rseng.github.io/software/repository/github/sncosmo/sncosmo", "api_url": "https://rseng.github.io/software/api/repos/github/sncosmo/sncosmo"}, {"uid": "github/demorest/nanopipe", "html_url": "https://rseng.github.io/software/repository/github/demorest/nanopipe", "api_url": "https://rseng.github.io/software/api/repos/github/demorest/nanopipe"}, {"uid": "github/adriancorrendo/metrica", "html_url": "https://rseng.github.io/software/repository/github/adriancorrendo/metrica", "api_url": "https://rseng.github.io/software/api/repos/github/adriancorrendo/metrica"}, {"uid": "github/xastprl/darsakx", "html_url": "https://rseng.github.io/software/repository/github/xastprl/darsakx", "api_url": "https://rseng.github.io/software/api/repos/github/xastprl/darsakx"}, {"uid": "github/toros-astro/corral", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/corral", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/corral"}, {"uid": "github/toros-astro/astroalign-legacy", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/astroalign-legacy", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/astroalign-legacy"}, {"uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "html_url": "https://rseng.github.io/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "api_url": "https://rseng.github.io/software/api/repos/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions"}, {"uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "html_url": "https://rseng.github.io/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "api_url": "https://rseng.github.io/software/api/repos/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling"}, {"uid": "github/bluesky/bluesky", "html_url": "https://rseng.github.io/software/repository/github/bluesky/bluesky", "api_url": "https://rseng.github.io/software/api/repos/github/bluesky/bluesky"}, {"uid": "github/sgshulman/DGEM", "html_url": "https://rseng.github.io/software/repository/github/sgshulman/DGEM", "api_url": "https://rseng.github.io/software/api/repos/github/sgshulman/DGEM"}, {"uid": "github/AnantharamanLab/vRhyme", "html_url": "https://rseng.github.io/software/repository/github/AnantharamanLab/vRhyme", "api_url": "https://rseng.github.io/software/api/repos/github/AnantharamanLab/vRhyme"}, {"uid": "github/acerbilab/pybads", "html_url": "https://rseng.github.io/software/repository/github/acerbilab/pybads", "api_url": "https://rseng.github.io/software/api/repos/github/acerbilab/pybads"}, {"uid": "github/galtay/urchin", "html_url": "https://rseng.github.io/software/repository/github/galtay/urchin", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/urchin"}, {"uid": "github/galtay/sphray", "html_url": "https://rseng.github.io/software/repository/github/galtay/sphray", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/sphray"}, {"uid": "github/davidgardenier/frbcat", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbcat", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbcat"}, {"uid": "github/davidgardenier/frbpoppy", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbpoppy", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbpoppy"}, {"uid": "github/nichollsh/AGNI", "html_url": "https://rseng.github.io/software/repository/github/nichollsh/AGNI", "api_url": "https://rseng.github.io/software/api/repos/github/nichollsh/AGNI"}, {"uid": "github/cole-trapnell-lab/cufflinks", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/cufflinks", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/cufflinks"}, {"uid": "github/cole-trapnell-lab/monocle3", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/monocle3", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/monocle3"}, {"uid": "github/ebi-jdispatcher/taxonomy-resolver", "html_url": "https://rseng.github.io/software/repository/github/ebi-jdispatcher/taxonomy-resolver", "api_url": "https://rseng.github.io/software/api/repos/github/ebi-jdispatcher/taxonomy-resolver"}, {"uid": "github/rambaut/jebl2", "html_url": "https://rseng.github.io/software/repository/github/rambaut/jebl2", "api_url": "https://rseng.github.io/software/api/repos/github/rambaut/jebl2"}, {"uid": "github/katholt/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kleborate"}, {"uid": "github/katholt/Kaptive", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kaptive", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kaptive"}, {"uid": "github/katholt/srst2", "html_url": "https://rseng.github.io/software/repository/github/katholt/srst2", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/srst2"}, {"uid": "github/erikhom/aida", "html_url": "https://rseng.github.io/software/repository/github/erikhom/aida", "api_url": "https://rseng.github.io/software/api/repos/github/erikhom/aida"}, {"uid": "github/jdcphysics/validation", "html_url": "https://rseng.github.io/software/repository/github/jdcphysics/validation", "api_url": "https://rseng.github.io/software/api/repos/github/jdcphysics/validation"}, {"uid": "github/alexdaniel654/qlayers", "html_url": "https://rseng.github.io/software/repository/github/alexdaniel654/qlayers", "api_url": "https://rseng.github.io/software/api/repos/github/alexdaniel654/qlayers"}, {"uid": "github/CEA-MetroCarac/pystack3d", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/pystack3d", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/pystack3d"}, {"uid": "github/CEA-MetroCarac/fitspy", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/fitspy", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/fitspy"}, {"uid": "github/Markusjsommer/BalrogCPP", "html_url": "https://rseng.github.io/software/repository/github/Markusjsommer/BalrogCPP", "api_url": "https://rseng.github.io/software/api/repos/github/Markusjsommer/BalrogCPP"}, {"uid": "github/Taywee/args", "html_url": "https://rseng.github.io/software/repository/github/Taywee/args", "api_url": "https://rseng.github.io/software/api/repos/github/Taywee/args"}, {"uid": "github/AngryMaciek/hypercomplex", "html_url": "https://rseng.github.io/software/repository/github/AngryMaciek/hypercomplex", "api_url": "https://rseng.github.io/software/api/repos/github/AngryMaciek/hypercomplex"}, {"uid": "github/MouseLand/cellpose", "html_url": "https://rseng.github.io/software/repository/github/MouseLand/cellpose", "api_url": "https://rseng.github.io/software/api/repos/github/MouseLand/cellpose"}, {"uid": "github/cwieder/py-ssPA", "html_url": "https://rseng.github.io/software/repository/github/cwieder/py-ssPA", "api_url": "https://rseng.github.io/software/api/repos/github/cwieder/py-ssPA"}, {"uid": "github/snakesonabrain/groundhog", "html_url": "https://rseng.github.io/software/repository/github/snakesonabrain/groundhog", "api_url": "https://rseng.github.io/software/api/repos/github/snakesonabrain/groundhog"}, {"uid": "github/glass-dev/glass", "html_url": "https://rseng.github.io/software/repository/github/glass-dev/glass", "api_url": "https://rseng.github.io/software/api/repos/github/glass-dev/glass"}, {"uid": "github/aliojjati/MGCAMB", "html_url": "https://rseng.github.io/software/repository/github/aliojjati/MGCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/aliojjati/MGCAMB"}, {"uid": "github/AntonelliLab/seqcap_processor", "html_url": "https://rseng.github.io/software/repository/github/AntonelliLab/seqcap_processor", "api_url": "https://rseng.github.io/software/api/repos/github/AntonelliLab/seqcap_processor"}, {"uid": "github/RasmussenLab/vamb", "html_url": "https://rseng.github.io/software/repository/github/RasmussenLab/vamb", "api_url": "https://rseng.github.io/software/api/repos/github/RasmussenLab/vamb"}, {"uid": "github/jordanlab/STing", "html_url": "https://rseng.github.io/software/repository/github/jordanlab/STing", "api_url": "https://rseng.github.io/software/api/repos/github/jordanlab/STing"}, {"uid": "github/yangxiaolinyn/Lemon", "html_url": "https://rseng.github.io/software/repository/github/yangxiaolinyn/Lemon", "api_url": "https://rseng.github.io/software/api/repos/github/yangxiaolinyn/Lemon"}, {"uid": "github/DidierMurilloF/FielDHub", "html_url": "https://rseng.github.io/software/repository/github/DidierMurilloF/FielDHub", "api_url": "https://rseng.github.io/software/api/repos/github/DidierMurilloF/FielDHub"}, {"uid": "github/noraeisner/LATTE", "html_url": "https://rseng.github.io/software/repository/github/noraeisner/LATTE", "api_url": "https://rseng.github.io/software/api/repos/github/noraeisner/LATTE"}, {"uid": "github/dpthorngren/PlanetSlicer", "html_url": "https://rseng.github.io/software/repository/github/dpthorngren/PlanetSlicer", "api_url": "https://rseng.github.io/software/api/repos/github/dpthorngren/PlanetSlicer"}, {"uid": "github/Mik3M4n/BaCoN", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/BaCoN", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/BaCoN"}, {"uid": "github/Mik3M4n/EF-TIGRE", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/EF-TIGRE", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/EF-TIGRE"}, {"uid": "github/matteolucchini1/BHJet", "html_url": "https://rseng.github.io/software/repository/github/matteolucchini1/BHJet", "api_url": "https://rseng.github.io/software/api/repos/github/matteolucchini1/BHJet"}, {"uid": "github/fedbiomed/fedbiomed", "html_url": "https://rseng.github.io/software/repository/github/fedbiomed/fedbiomed", "api_url": "https://rseng.github.io/software/api/repos/github/fedbiomed/fedbiomed"}, {"uid": "github/xianggebenben/GraphSL", "html_url": "https://rseng.github.io/software/repository/github/xianggebenben/GraphSL", "api_url": "https://rseng.github.io/software/api/repos/github/xianggebenben/GraphSL"}, {"uid": "github/domschrei/mallob", "html_url": "https://rseng.github.io/software/repository/github/domschrei/mallob", "api_url": "https://rseng.github.io/software/api/repos/github/domschrei/mallob"}, {"uid": "github/dbuscher/pois", "html_url": "https://rseng.github.io/software/repository/github/dbuscher/pois", "api_url": "https://rseng.github.io/software/api/repos/github/dbuscher/pois"}, {"uid": "github/lmfit/lmfit-py", "html_url": "https://rseng.github.io/software/repository/github/lmfit/lmfit-py", "api_url": "https://rseng.github.io/software/api/repos/github/lmfit/lmfit-py"}, {"uid": "github/open-and-sustainable/prismaid", "html_url": "https://rseng.github.io/software/repository/github/open-and-sustainable/prismaid", "api_url": "https://rseng.github.io/software/api/repos/github/open-and-sustainable/prismaid"}, {"uid": "github/connor-makowski/type_enforced", "html_url": "https://rseng.github.io/software/repository/github/connor-makowski/type_enforced", "api_url": "https://rseng.github.io/software/api/repos/github/connor-makowski/type_enforced"}, {"uid": "github/flatironinstitute/nifty-ls", "html_url": "https://rseng.github.io/software/repository/github/flatironinstitute/nifty-ls", "api_url": "https://rseng.github.io/software/api/repos/github/flatironinstitute/nifty-ls"}, {"uid": "github/JianjunTan-Beijing/LPI-CSFFR", "html_url": "https://rseng.github.io/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", "api_url": "https://rseng.github.io/software/api/repos/github/JianjunTan-Beijing/LPI-CSFFR"}, {"uid": "github/rhdtownsend/gyre", "html_url": "https://rseng.github.io/software/repository/github/rhdtownsend/gyre", "api_url": "https://rseng.github.io/software/api/repos/github/rhdtownsend/gyre"}, {"uid": "github/HITS-AIN/PINK", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/PINK", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/PINK"}, {"uid": "github/HITS-AIN/GPCC.jl", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/GPCC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/GPCC.jl"}, {"uid": "github/kuadrat/data_slicer", "html_url": "https://rseng.github.io/software/repository/github/kuadrat/data_slicer", "api_url": "https://rseng.github.io/software/api/repos/github/kuadrat/data_slicer"}, {"uid": "github/spacetelescope/specviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specviz"}, {"uid": "github/spacetelescope/stginga", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stginga", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stginga"}, {"uid": "github/spacetelescope/stsynphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsynphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsynphot_refactor"}, {"uid": "github/spacetelescope/spaceKLIP", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/spaceKLIP", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/spaceKLIP"}, {"uid": "github/spacetelescope/astronify", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/astronify", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/astronify"}, {"uid": "github/spacetelescope/imexam", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/imexam", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/imexam"}, {"uid": "github/spacetelescope/exovetter", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/exovetter", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/exovetter"}, {"uid": "github/spacetelescope/mirage", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/mirage", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/mirage"}, {"uid": "github/spacetelescope/jdaviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/jdaviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/jdaviz"}, {"uid": "github/spacetelescope/specview", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specview", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specview"}, {"uid": "github/spacetelescope/pystortion", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/pystortion", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/pystortion"}, {"uid": "github/spacetelescope/synphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/synphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/synphot_refactor"}, {"uid": "github/spacetelescope/hst_cosmic_rays", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/hst_cosmic_rays", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/hst_cosmic_rays"}, {"uid": "github/spacetelescope/stsdas_stripped", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsdas_stripped", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsdas_stripped"}, {"uid": "github/GreenScheduler/cats", "html_url": "https://rseng.github.io/software/repository/github/GreenScheduler/cats", "api_url": "https://rseng.github.io/software/api/repos/github/GreenScheduler/cats"}, {"uid": "github/Ciela-Institute/caustics", "html_url": "https://rseng.github.io/software/repository/github/Ciela-Institute/caustics", "api_url": "https://rseng.github.io/software/api/repos/github/Ciela-Institute/caustics"}, {"uid": "github/gymreklab/GangSTR", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/GangSTR", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/GangSTR"}, {"uid": "github/gymreklab/chips", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/chips", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/chips"}, {"uid": "github/phylo42/EPIK", "html_url": "https://rseng.github.io/software/repository/github/phylo42/EPIK", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/EPIK"}, {"uid": "github/phylo42/RAPPAS", "html_url": "https://rseng.github.io/software/repository/github/phylo42/RAPPAS", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/RAPPAS"}, {"uid": "github/IanHeywood/oxkat", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/oxkat", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/oxkat"}, {"uid": "github/IanHeywood/pony3d", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/pony3d", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/pony3d"}, {"uid": "github/landlab/landlab", "html_url": "https://rseng.github.io/software/repository/github/landlab/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/landlab/landlab"}, {"uid": "github/BIC-MNI/libminc", "html_url": "https://rseng.github.io/software/repository/github/BIC-MNI/libminc", "api_url": "https://rseng.github.io/software/api/repos/github/BIC-MNI/libminc"}, {"uid": "github/ParisAstronomicalDataCentre/OPUS", "html_url": "https://rseng.github.io/software/repository/github/ParisAstronomicalDataCentre/OPUS", "api_url": "https://rseng.github.io/software/api/repos/github/ParisAstronomicalDataCentre/OPUS"}, {"uid": "github/christiangil/StellarSpectraObservationFitting.jl", "html_url": "https://rseng.github.io/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/christiangil/StellarSpectraObservationFitting.jl"}, {"uid": "github/kmlefran/aiida-aimall", "html_url": "https://rseng.github.io/software/repository/github/kmlefran/aiida-aimall", "api_url": "https://rseng.github.io/software/api/repos/github/kmlefran/aiida-aimall"}, {"uid": "github/lilyminium/psiresp", "html_url": "https://rseng.github.io/software/repository/github/lilyminium/psiresp", "api_url": "https://rseng.github.io/software/api/repos/github/lilyminium/psiresp"}, {"uid": "github/blackrim/phyutility", "html_url": "https://rseng.github.io/software/repository/github/blackrim/phyutility", "api_url": "https://rseng.github.io/software/api/repos/github/blackrim/phyutility"}, {"uid": "github/kingyin3613/RingsPy", "html_url": "https://rseng.github.io/software/repository/github/kingyin3613/RingsPy", "api_url": "https://rseng.github.io/software/api/repos/github/kingyin3613/RingsPy"}, {"uid": "github/JuliaGeo/CFTime.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeo/CFTime.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeo/CFTime.jl"}, {"uid": "github/ClaraLage/Portfolio-Transition", "html_url": "https://rseng.github.io/software/repository/github/ClaraLage/Portfolio-Transition", "api_url": "https://rseng.github.io/software/api/repos/github/ClaraLage/Portfolio-Transition"}, {"uid": "github/NASA-PDS/naif-pds4-bundler", "html_url": "https://rseng.github.io/software/repository/github/NASA-PDS/naif-pds4-bundler", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-PDS/naif-pds4-bundler"}, {"uid": "github/maxibor/sam2lca", "html_url": "https://rseng.github.io/software/repository/github/maxibor/sam2lca", "api_url": "https://rseng.github.io/software/api/repos/github/maxibor/sam2lca"}, {"uid": "github/ckm3/Py-PDM", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Py-PDM", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Py-PDM"}, {"uid": "github/ckm3/Deep-Transit", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Deep-Transit", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Deep-Transit"}, {"uid": "github/unmannedlab/ekf_cal", "html_url": "https://rseng.github.io/software/repository/github/unmannedlab/ekf_cal", "api_url": "https://rseng.github.io/software/api/repos/github/unmannedlab/ekf_cal"}, {"uid": "github/BerkeleyLab/caffeine", "html_url": "https://rseng.github.io/software/repository/github/BerkeleyLab/caffeine", "api_url": "https://rseng.github.io/software/api/repos/github/BerkeleyLab/caffeine"}, {"uid": "github/portsmouth/cmbview", "html_url": "https://rseng.github.io/software/repository/github/portsmouth/cmbview", "api_url": "https://rseng.github.io/software/api/repos/github/portsmouth/cmbview"}, {"uid": "github/ksahlin/strobealign", "html_url": "https://rseng.github.io/software/repository/github/ksahlin/strobealign", "api_url": "https://rseng.github.io/software/api/repos/github/ksahlin/strobealign"}, {"uid": "github/mihanke/athos", "html_url": "https://rseng.github.io/software/repository/github/mihanke/athos", "api_url": "https://rseng.github.io/software/api/repos/github/mihanke/athos"}, {"uid": "github/bokeh/bokeh", "html_url": "https://rseng.github.io/software/repository/github/bokeh/bokeh", "api_url": "https://rseng.github.io/software/api/repos/github/bokeh/bokeh"}, {"uid": "github/jbytecode/LinRegOutliers", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/LinRegOutliers", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/LinRegOutliers"}, {"uid": "github/jbytecode/OperationsResearchModels.jl", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/OperationsResearchModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/OperationsResearchModels.jl"}, {"uid": "github/jbytecode/JMcDM", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/JMcDM", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/JMcDM"}, {"uid": "github/eliotayache/GAMMA", "html_url": "https://rseng.github.io/software/repository/github/eliotayache/GAMMA", "api_url": "https://rseng.github.io/software/api/repos/github/eliotayache/GAMMA"}, {"uid": "github/liangcheng-hrbmu/EnrichDO", "html_url": "https://rseng.github.io/software/repository/github/liangcheng-hrbmu/EnrichDO", "api_url": "https://rseng.github.io/software/api/repos/github/liangcheng-hrbmu/EnrichDO"}, {"uid": "github/miriamkw/GluPredKit", "html_url": "https://rseng.github.io/software/repository/github/miriamkw/GluPredKit", "api_url": "https://rseng.github.io/software/api/repos/github/miriamkw/GluPredKit"}, {"uid": "github/ArisTr/PyRaTE", "html_url": "https://rseng.github.io/software/repository/github/ArisTr/PyRaTE", "api_url": "https://rseng.github.io/software/api/repos/github/ArisTr/PyRaTE"}, {"uid": "github/swiss-armed-forces/openburst", "html_url": "https://rseng.github.io/software/repository/github/swiss-armed-forces/openburst", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-armed-forces/openburst"}, {"uid": "github/prdm0/ropenblas", "html_url": "https://rseng.github.io/software/repository/github/prdm0/ropenblas", "api_url": "https://rseng.github.io/software/api/repos/github/prdm0/ropenblas"}, {"uid": "github/cvbuchem/LavAtmos", "html_url": "https://rseng.github.io/software/repository/github/cvbuchem/LavAtmos", "api_url": "https://rseng.github.io/software/api/repos/github/cvbuchem/LavAtmos"}, {"uid": "github/b-pardi/BraTaDio", "html_url": "https://rseng.github.io/software/repository/github/b-pardi/BraTaDio", "api_url": "https://rseng.github.io/software/api/repos/github/b-pardi/BraTaDio"}, {"uid": "github/BradyAJohnston/MolecularNodes", "html_url": "https://rseng.github.io/software/repository/github/BradyAJohnston/MolecularNodes", "api_url": "https://rseng.github.io/software/api/repos/github/BradyAJohnston/MolecularNodes"}, {"uid": "github/max-little/GRAPL", "html_url": "https://rseng.github.io/software/repository/github/max-little/GRAPL", "api_url": "https://rseng.github.io/software/api/repos/github/max-little/GRAPL"}, {"uid": "github/ictr/covid19-outbreak-simulator", "html_url": "https://rseng.github.io/software/repository/github/ictr/covid19-outbreak-simulator", "api_url": "https://rseng.github.io/software/api/repos/github/ictr/covid19-outbreak-simulator"}, {"uid": "github/nawrockie/vadr", "html_url": "https://rseng.github.io/software/repository/github/nawrockie/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/nawrockie/vadr"}, {"uid": "github/PyDL/cat-puma", "html_url": "https://rseng.github.io/software/repository/github/PyDL/cat-puma", "api_url": "https://rseng.github.io/software/api/repos/github/PyDL/cat-puma"}, {"uid": "github/girder/viime", "html_url": "https://rseng.github.io/software/repository/github/girder/viime", "api_url": "https://rseng.github.io/software/api/repos/github/girder/viime"}, {"uid": "github/ComputationalPhysiology/simcardems", "html_url": "https://rseng.github.io/software/repository/github/ComputationalPhysiology/simcardems", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalPhysiology/simcardems"}, {"uid": "github/jakelever/civicmine", "html_url": "https://rseng.github.io/software/repository/github/jakelever/civicmine", "api_url": "https://rseng.github.io/software/api/repos/github/jakelever/civicmine"}, {"uid": "github/PaulHancock/Aegean", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Aegean", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Aegean"}, {"uid": "github/PaulHancock/Robbie", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Robbie", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Robbie"}, {"uid": "github/hemantaph/gwsnr", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/gwsnr", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/gwsnr"}, {"uid": "github/hemantaph/ler", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/ler", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/ler"}, {"uid": "github/standage/AEGeAn", "html_url": "https://rseng.github.io/software/repository/github/standage/AEGeAn", "api_url": "https://rseng.github.io/software/api/repos/github/standage/AEGeAn"}, {"uid": "github/fusk-kpu/StressResponseGenesAtlas", "html_url": "https://rseng.github.io/software/repository/github/fusk-kpu/StressResponseGenesAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/fusk-kpu/StressResponseGenesAtlas"}, {"uid": "github/jGetMove/jGetMove", "html_url": "https://rseng.github.io/software/repository/github/jGetMove/jGetMove", "api_url": "https://rseng.github.io/software/api/repos/github/jGetMove/jGetMove"}, {"uid": "github/bowang-lab/scGPT", "html_url": "https://rseng.github.io/software/repository/github/bowang-lab/scGPT", "api_url": "https://rseng.github.io/software/api/repos/github/bowang-lab/scGPT"}, {"uid": "github/mortonne/psifr", "html_url": "https://rseng.github.io/software/repository/github/mortonne/psifr", "api_url": "https://rseng.github.io/software/api/repos/github/mortonne/psifr"}, {"uid": "github/lsncibb/microbiomeGWAS", "html_url": "https://rseng.github.io/software/repository/github/lsncibb/microbiomeGWAS", "api_url": "https://rseng.github.io/software/api/repos/github/lsncibb/microbiomeGWAS"}, {"uid": "github/SynthSys/pyOmeroUpload", "html_url": "https://rseng.github.io/software/repository/github/SynthSys/pyOmeroUpload", "api_url": "https://rseng.github.io/software/api/repos/github/SynthSys/pyOmeroUpload"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts"}, {"uid": "github/bonsai-team/Porechop_ABI", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/Porechop_ABI", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/Porechop_ABI"}, {"uid": "github/bonsai-team/matam", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/matam", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/matam"}, {"uid": "github/pytoolz/toolz", "html_url": "https://rseng.github.io/software/repository/github/pytoolz/toolz", "api_url": "https://rseng.github.io/software/api/repos/github/pytoolz/toolz"}, {"uid": "github/HuttleyLab/DiverseSeq", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/DiverseSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/DiverseSeq"}, {"uid": "github/HuttleyLab/scitrack", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/scitrack", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/scitrack"}, {"uid": "github/DrJCarson/BoundedCoalescent", "html_url": "https://rseng.github.io/software/repository/github/DrJCarson/BoundedCoalescent", "api_url": "https://rseng.github.io/software/api/repos/github/DrJCarson/BoundedCoalescent"}, {"uid": "github/huiwenke/MineProt", "html_url": "https://rseng.github.io/software/repository/github/huiwenke/MineProt", "api_url": "https://rseng.github.io/software/api/repos/github/huiwenke/MineProt"}, {"uid": "github/florpi/sunbird", "html_url": "https://rseng.github.io/software/repository/github/florpi/sunbird", "api_url": "https://rseng.github.io/software/api/repos/github/florpi/sunbird"}, {"uid": "github/callendeprieto/ferre", "html_url": "https://rseng.github.io/software/repository/github/callendeprieto/ferre", "api_url": "https://rseng.github.io/software/api/repos/github/callendeprieto/ferre"}, {"uid": "github/wtraylor/modular_megafauna_model", "html_url": "https://rseng.github.io/software/repository/github/wtraylor/modular_megafauna_model", "api_url": "https://rseng.github.io/software/api/repos/github/wtraylor/modular_megafauna_model"}, {"uid": "github/caselawanalytics/CaseLawAnalytics", "html_url": "https://rseng.github.io/software/repository/github/caselawanalytics/CaseLawAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/caselawanalytics/CaseLawAnalytics"}, {"uid": "github/magnusmanske/snpomatic", "html_url": "https://rseng.github.io/software/repository/github/magnusmanske/snpomatic", "api_url": "https://rseng.github.io/software/api/repos/github/magnusmanske/snpomatic"}, {"uid": "github/JCGoran/coffe", "html_url": "https://rseng.github.io/software/repository/github/JCGoran/coffe", "api_url": "https://rseng.github.io/software/api/repos/github/JCGoran/coffe"}, {"uid": "github/fair-software/howfairis", "html_url": "https://rseng.github.io/software/repository/github/fair-software/howfairis", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/howfairis"}, {"uid": "github/fair-software/fairtally", "html_url": "https://rseng.github.io/software/repository/github/fair-software/fairtally", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/fairtally"}, {"uid": "github/yupidevs/pactus", "html_url": "https://rseng.github.io/software/repository/github/yupidevs/pactus", "api_url": "https://rseng.github.io/software/api/repos/github/yupidevs/pactus"}, {"uid": "github/PACurran/MCSpearman", "html_url": "https://rseng.github.io/software/repository/github/PACurran/MCSpearman", "api_url": "https://rseng.github.io/software/api/repos/github/PACurran/MCSpearman"}, {"uid": "github/JannisHoch/copro", "html_url": "https://rseng.github.io/software/repository/github/JannisHoch/copro", "api_url": "https://rseng.github.io/software/api/repos/github/JannisHoch/copro"}, {"uid": "github/WGS-TB/MentaLiST", "html_url": "https://rseng.github.io/software/repository/github/WGS-TB/MentaLiST", "api_url": "https://rseng.github.io/software/api/repos/github/WGS-TB/MentaLiST"}, {"uid": "github/Valires/er-evaluation", "html_url": "https://rseng.github.io/software/repository/github/Valires/er-evaluation", "api_url": "https://rseng.github.io/software/api/repos/github/Valires/er-evaluation"}, {"uid": "github/JHayoz/CROCODILE", "html_url": "https://rseng.github.io/software/repository/github/JHayoz/CROCODILE", "api_url": "https://rseng.github.io/software/api/repos/github/JHayoz/CROCODILE"}, {"uid": "github/zgazak/TAP", "html_url": "https://rseng.github.io/software/repository/github/zgazak/TAP", "api_url": "https://rseng.github.io/software/api/repos/github/zgazak/TAP"}, {"uid": "github/DotBots/qrkey", "html_url": "https://rseng.github.io/software/repository/github/DotBots/qrkey", "api_url": "https://rseng.github.io/software/api/repos/github/DotBots/qrkey"}, {"uid": "github/JuliaPlots/Makie.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPlots/Makie.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPlots/Makie.jl"}, {"uid": "github/vibbits/phyd3", "html_url": "https://rseng.github.io/software/repository/github/vibbits/phyd3", "api_url": "https://rseng.github.io/software/api/repos/github/vibbits/phyd3"}, {"uid": "github/axgoujon/convex_ridge_regularizers", "html_url": "https://rseng.github.io/software/repository/github/axgoujon/convex_ridge_regularizers", "api_url": "https://rseng.github.io/software/api/repos/github/axgoujon/convex_ridge_regularizers"}, {"uid": "github/mattyowl/astLib", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/astLib", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/astLib"}, {"uid": "github/mattyowl/fitScalingRelation", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/fitScalingRelation", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/fitScalingRelation"}, {"uid": "github/djones1040/PythonPhot", "html_url": "https://rseng.github.io/software/repository/github/djones1040/PythonPhot", "api_url": "https://rseng.github.io/software/api/repos/github/djones1040/PythonPhot"}, {"uid": "github/alixlam/fmristroke", "html_url": "https://rseng.github.io/software/repository/github/alixlam/fmristroke", "api_url": "https://rseng.github.io/software/api/repos/github/alixlam/fmristroke"}, {"uid": "github/faircloth-lab/phyluce", "html_url": "https://rseng.github.io/software/repository/github/faircloth-lab/phyluce", "api_url": "https://rseng.github.io/software/api/repos/github/faircloth-lab/phyluce"}, {"uid": "github/henrikmelin/h3ppy", "html_url": "https://rseng.github.io/software/repository/github/henrikmelin/h3ppy", "api_url": "https://rseng.github.io/software/api/repos/github/henrikmelin/h3ppy"}, {"uid": "github/cmelab/flowerMD", "html_url": "https://rseng.github.io/software/repository/github/cmelab/flowerMD", "api_url": "https://rseng.github.io/software/api/repos/github/cmelab/flowerMD"}, {"uid": "github/hnikaein/stark", "html_url": "https://rseng.github.io/software/repository/github/hnikaein/stark", "api_url": "https://rseng.github.io/software/api/repos/github/hnikaein/stark"}, {"uid": "github/nanoporetech/index.html#", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/index.html#", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/index.html#"}, {"uid": "github/nanoporetech/pychopper", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pychopper", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pychopper"}, {"uid": "github/nanoporetech/tombo", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/tombo", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/tombo"}, {"uid": "github/nanoporetech/pinfish", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pinfish", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pinfish"}, {"uid": "github/nanoporetech/scrappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/scrappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/scrappie"}, {"uid": "github/nanoporetech/flappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/flappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/flappie"}, {"uid": "github/nanoporetech/ont_fast5_api", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/ont_fast5_api", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/ont_fast5_api"}, {"uid": "github/nanoporetech/qcat", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/qcat", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/qcat"}, {"uid": "github/nanoporetech/dorado", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/dorado", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/dorado"}, {"uid": "github/nanoporetech/medaka", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/medaka", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/medaka"}, {"uid": "github/nanoporetech/megalodon", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/megalodon", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/megalodon"}, {"uid": "github/nanoporetech/pomoxis", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pomoxis", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pomoxis"}, {"uid": "github/ejeschke/ginga", "html_url": "https://rseng.github.io/software/repository/github/ejeschke/ginga", "api_url": "https://rseng.github.io/software/api/repos/github/ejeschke/ginga"}, {"uid": "github/Mihart-web/CARBONETTE", "html_url": "https://rseng.github.io/software/repository/github/Mihart-web/CARBONETTE", "api_url": "https://rseng.github.io/software/api/repos/github/Mihart-web/CARBONETTE"}, {"uid": "github/qpv-research-group/solcore5", "html_url": "https://rseng.github.io/software/repository/github/qpv-research-group/solcore5", "api_url": "https://rseng.github.io/software/api/repos/github/qpv-research-group/solcore5"}, {"uid": "github/alexdobin/STAR", "html_url": "https://rseng.github.io/software/repository/github/alexdobin/STAR", "api_url": "https://rseng.github.io/software/api/repos/github/alexdobin/STAR"}, {"uid": "github/Yu-Group/simChef", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/simChef", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/simChef"}, {"uid": "github/Yu-Group/veridical-flow", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/veridical-flow", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/veridical-flow"}, {"uid": "github/pavolgaj/OCFit", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/OCFit", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/OCFit"}, {"uid": "github/pavolgaj/ObsPlanner", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/ObsPlanner", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/ObsPlanner"}, {"uid": "github/CisnerosResearch/LICHEM", "html_url": "https://rseng.github.io/software/repository/github/CisnerosResearch/LICHEM", "api_url": "https://rseng.github.io/software/api/repos/github/CisnerosResearch/LICHEM"}, {"uid": "github/nonlocalmodels/NLMech", "html_url": "https://rseng.github.io/software/repository/github/nonlocalmodels/NLMech", "api_url": "https://rseng.github.io/software/api/repos/github/nonlocalmodels/NLMech"}, {"uid": "github/maickrau/MBG", "html_url": "https://rseng.github.io/software/repository/github/maickrau/MBG", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/MBG"}, {"uid": "github/maickrau/GraphAligner", "html_url": "https://rseng.github.io/software/repository/github/maickrau/GraphAligner", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/GraphAligner"}, {"uid": "github/TeamCOMPAS/COMPAS", "html_url": "https://rseng.github.io/software/repository/github/TeamCOMPAS/COMPAS", "api_url": "https://rseng.github.io/software/api/repos/github/TeamCOMPAS/COMPAS"}, {"uid": "github/seamusclarke/rjplots", "html_url": "https://rseng.github.io/software/repository/github/seamusclarke/rjplots", "api_url": "https://rseng.github.io/software/api/repos/github/seamusclarke/rjplots"}, {"uid": "github/cbirdferrer/collatrix", "html_url": "https://rseng.github.io/software/repository/github/cbirdferrer/collatrix", "api_url": "https://rseng.github.io/software/api/repos/github/cbirdferrer/collatrix"}, {"uid": "github/fakedrtom/oncogemini", "html_url": "https://rseng.github.io/software/repository/github/fakedrtom/oncogemini", "api_url": "https://rseng.github.io/software/api/repos/github/fakedrtom/oncogemini"}, {"uid": "github/StingraySoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/stingray"}, {"uid": "github/StingraySoftware/HENDRICS", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/HENDRICS", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/HENDRICS"}, {"uid": "github/eisascience/HISTA", "html_url": "https://rseng.github.io/software/repository/github/eisascience/HISTA", "api_url": "https://rseng.github.io/software/api/repos/github/eisascience/HISTA"}, {"uid": "github/olivares-j/Kalkayotl", "html_url": "https://rseng.github.io/software/repository/github/olivares-j/Kalkayotl", "api_url": "https://rseng.github.io/software/api/repos/github/olivares-j/Kalkayotl"}, {"uid": "github/andyphilips/dynamac", "html_url": "https://rseng.github.io/software/repository/github/andyphilips/dynamac", "api_url": "https://rseng.github.io/software/api/repos/github/andyphilips/dynamac"}, {"uid": "github/JacobBumgarner/VesselVio", "html_url": "https://rseng.github.io/software/repository/github/JacobBumgarner/VesselVio", "api_url": "https://rseng.github.io/software/api/repos/github/JacobBumgarner/VesselVio"}, {"uid": "github/simonehagey/orbdot", "html_url": "https://rseng.github.io/software/repository/github/simonehagey/orbdot", "api_url": "https://rseng.github.io/software/api/repos/github/simonehagey/orbdot"}, {"uid": "github/pencil-code/pencil-code", "html_url": "https://rseng.github.io/software/repository/github/pencil-code/pencil-code", "api_url": "https://rseng.github.io/software/api/repos/github/pencil-code/pencil-code"}, {"uid": "github/vatlab/sos-notebook", "html_url": "https://rseng.github.io/software/repository/github/vatlab/sos-notebook", "api_url": "https://rseng.github.io/software/api/repos/github/vatlab/sos-notebook"}, {"uid": "github/ECP-copa/Cabana", "html_url": "https://rseng.github.io/software/repository/github/ECP-copa/Cabana", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-copa/Cabana"}, {"uid": "github/MayaWaves/mayawaves", "html_url": "https://rseng.github.io/software/repository/github/MayaWaves/mayawaves", "api_url": "https://rseng.github.io/software/api/repos/github/MayaWaves/mayawaves"}, {"uid": "github/brocklab/pycashier", "html_url": "https://rseng.github.io/software/repository/github/brocklab/pycashier", "api_url": "https://rseng.github.io/software/api/repos/github/brocklab/pycashier"}, {"uid": "github/guynir42/radon", "html_url": "https://rseng.github.io/software/repository/github/guynir42/radon", "api_url": "https://rseng.github.io/software/api/repos/github/guynir42/radon"}, {"uid": "github/Starlink/hds-v5", "html_url": "https://rseng.github.io/software/repository/github/Starlink/hds-v5", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/hds-v5"}, {"uid": "github/Starlink/perl-Starlink-Autoastrom", "html_url": "https://rseng.github.io/software/repository/github/Starlink/perl-Starlink-Autoastrom", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/perl-Starlink-Autoastrom"}, {"uid": "github/Starlink/ORAC-DR", "html_url": "https://rseng.github.io/software/repository/github/Starlink/ORAC-DR", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/ORAC-DR"}, {"uid": "github/Starlink/starlink", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starlink", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starlink"}, {"uid": "github/Starlink/starjava", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starjava", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starjava"}, {"uid": "github/Starlink/aspic", "html_url": "https://rseng.github.io/software/repository/github/Starlink/aspic", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/aspic"}, {"uid": "github/Starlink/palpy", "html_url": "https://rseng.github.io/software/repository/github/Starlink/palpy", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/palpy"}, {"uid": "github/Starlink/pal", "html_url": "https://rseng.github.io/software/repository/github/Starlink/pal", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/pal"}, {"uid": "github/lime-rt/lime", "html_url": "https://rseng.github.io/software/repository/github/lime-rt/lime", "api_url": "https://rseng.github.io/software/api/repos/github/lime-rt/lime"}, {"uid": "github/PixelgenTechnologies/pixelator", "html_url": "https://rseng.github.io/software/repository/github/PixelgenTechnologies/pixelator", "api_url": "https://rseng.github.io/software/api/repos/github/PixelgenTechnologies/pixelator"}, {"uid": "github/mwess/GreedyFHist", "html_url": "https://rseng.github.io/software/repository/github/mwess/GreedyFHist", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/GreedyFHist"}, {"uid": "github/mwess/miit", "html_url": "https://rseng.github.io/software/repository/github/mwess/miit", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/miit"}, {"uid": "github/leonzheng2/butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/butterfly"}, {"uid": "github/leonzheng2/efficient-butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/efficient-butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/efficient-butterfly"}, {"uid": "github/R-Computing-Lab/ggpedigree", "html_url": "https://rseng.github.io/software/repository/github/R-Computing-Lab/ggpedigree", "api_url": "https://rseng.github.io/software/api/repos/github/R-Computing-Lab/ggpedigree"}, {"uid": "github/fchuffar/protopackage", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/protopackage", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/protopackage"}, {"uid": "github/fchuffar/epimedtools", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/epimedtools", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/epimedtools"}, {"uid": "github/fchuffar/dmethr", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/dmethr", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/dmethr"}, {"uid": "github/psi4/psi4", "html_url": "https://rseng.github.io/software/repository/github/psi4/psi4", "api_url": "https://rseng.github.io/software/api/repos/github/psi4/psi4"}, {"uid": "github/Jammy2211/PyAutoLens", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoLens", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoLens"}, {"uid": "github/Jammy2211/PyAutoCTI", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoCTI", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoCTI"}, {"uid": "github/Jammy2211/PyAutoGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoGalaxy"}, {"uid": "github/atfrank/PyShifts", "html_url": "https://rseng.github.io/software/repository/github/atfrank/PyShifts", "api_url": "https://rseng.github.io/software/api/repos/github/atfrank/PyShifts"}, {"uid": "github/evanoconnor/GR1D", "html_url": "https://rseng.github.io/software/repository/github/evanoconnor/GR1D", "api_url": "https://rseng.github.io/software/api/repos/github/evanoconnor/GR1D"}, {"uid": "github/fairdataihub/SPARClink", "html_url": "https://rseng.github.io/software/repository/github/fairdataihub/SPARClink", "api_url": "https://rseng.github.io/software/api/repos/github/fairdataihub/SPARClink"}, {"uid": "github/creanero/locus", "html_url": "https://rseng.github.io/software/repository/github/creanero/locus", "api_url": "https://rseng.github.io/software/api/repos/github/creanero/locus"}, {"uid": "github/DLTK/DLTK", "html_url": "https://rseng.github.io/software/repository/github/DLTK/DLTK", "api_url": "https://rseng.github.io/software/api/repos/github/DLTK/DLTK"}, {"uid": "github/sjforeman/bskit", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/bskit", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/bskit"}, {"uid": "github/sjforeman/StringFast", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/StringFast", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/StringFast"}, {"uid": "github/carpyncho/carpyncho-py", "html_url": "https://rseng.github.io/software/repository/github/carpyncho/carpyncho-py", "api_url": "https://rseng.github.io/software/api/repos/github/carpyncho/carpyncho-py"}, {"uid": "github/vavrines/Kinetic.jl", "html_url": "https://rseng.github.io/software/repository/github/vavrines/Kinetic.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vavrines/Kinetic.jl"}, {"uid": "github/IPESE/REHO", "html_url": "https://rseng.github.io/software/repository/github/IPESE/REHO", "api_url": "https://rseng.github.io/software/api/repos/github/IPESE/REHO"}, {"uid": "github/MartianColonist/POSEIDON", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/POSEIDON", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/POSEIDON"}, {"uid": "github/MartianColonist/Cthulhu", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/Cthulhu", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/Cthulhu"}, {"uid": "github/CIbiv/guaCAMOLE", "html_url": "https://rseng.github.io/software/repository/github/CIbiv/guaCAMOLE", "api_url": "https://rseng.github.io/software/api/repos/github/CIbiv/guaCAMOLE"}, {"uid": "github/bhi-kimlab/StressGenePred", "html_url": "https://rseng.github.io/software/repository/github/bhi-kimlab/StressGenePred", "api_url": "https://rseng.github.io/software/api/repos/github/bhi-kimlab/StressGenePred"}, {"uid": "github/kuenzelab/ENDURE", "html_url": "https://rseng.github.io/software/repository/github/kuenzelab/ENDURE", "api_url": "https://rseng.github.io/software/api/repos/github/kuenzelab/ENDURE"}, {"uid": "github/TomKellyGenetics/graphsim", "html_url": "https://rseng.github.io/software/repository/github/TomKellyGenetics/graphsim", "api_url": "https://rseng.github.io/software/api/repos/github/TomKellyGenetics/graphsim"}, {"uid": "github/mswzeus/TargetNet", "html_url": "https://rseng.github.io/software/repository/github/mswzeus/TargetNet", "api_url": "https://rseng.github.io/software/api/repos/github/mswzeus/TargetNet"}, {"uid": "github/BorgwardtLab/simbsig", "html_url": "https://rseng.github.io/software/repository/github/BorgwardtLab/simbsig", "api_url": "https://rseng.github.io/software/api/repos/github/BorgwardtLab/simbsig"}, {"uid": "github/JuliaDiff/ReverseDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ReverseDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ReverseDiff.jl"}, {"uid": "github/JuliaDiff/ForwardDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ForwardDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ForwardDiff.jl"}, {"uid": "github/oskarhs/AutoHist.jl", "html_url": "https://rseng.github.io/software/repository/github/oskarhs/AutoHist.jl", "api_url": "https://rseng.github.io/software/api/repos/github/oskarhs/AutoHist.jl"}, {"uid": "github/parmoo/parmoo", "html_url": "https://rseng.github.io/software/repository/github/parmoo/parmoo", "api_url": "https://rseng.github.io/software/api/repos/github/parmoo/parmoo"}, {"uid": "github/thomas0809/MolScribe", "html_url": "https://rseng.github.io/software/repository/github/thomas0809/MolScribe", "api_url": "https://rseng.github.io/software/api/repos/github/thomas0809/MolScribe"}, {"uid": "github/nextgenusfs/funannotate", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/funannotate", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/funannotate"}, {"uid": "github/nextgenusfs/amptk", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/amptk", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/amptk"}, {"uid": "github/saltastro/pyhrs", "html_url": "https://rseng.github.io/software/repository/github/saltastro/pyhrs", "api_url": "https://rseng.github.io/software/api/repos/github/saltastro/pyhrs"}, {"uid": "github/PhilippJunk/homelette", "html_url": "https://rseng.github.io/software/repository/github/PhilippJunk/homelette", "api_url": "https://rseng.github.io/software/api/repos/github/PhilippJunk/homelette"}, {"uid": "github/efpl-columbia/PointClouds.jl", "html_url": "https://rseng.github.io/software/repository/github/efpl-columbia/PointClouds.jl", "api_url": "https://rseng.github.io/software/api/repos/github/efpl-columbia/PointClouds.jl"}, {"uid": "github/valeriabonapersona/repair", "html_url": "https://rseng.github.io/software/repository/github/valeriabonapersona/repair", "api_url": "https://rseng.github.io/software/api/repos/github/valeriabonapersona/repair"}, {"uid": "github/jmschrei/pomegranate", "html_url": "https://rseng.github.io/software/repository/github/jmschrei/pomegranate", "api_url": "https://rseng.github.io/software/api/repos/github/jmschrei/pomegranate"}, {"uid": "github/hishamhm/htop", "html_url": "https://rseng.github.io/software/repository/github/hishamhm/htop", "api_url": "https://rseng.github.io/software/api/repos/github/hishamhm/htop"}, {"uid": "github/inesbmartins02/HYMET", "html_url": "https://rseng.github.io/software/repository/github/inesbmartins02/HYMET", "api_url": "https://rseng.github.io/software/api/repos/github/inesbmartins02/HYMET"}, {"uid": "github/emerge-erc/ALminer", "html_url": "https://rseng.github.io/software/repository/github/emerge-erc/ALminer", "api_url": "https://rseng.github.io/software/api/repos/github/emerge-erc/ALminer"}, {"uid": "github/Qiskit/qiskit-experiments", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/qiskit-experiments", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/qiskit-experiments"}, {"uid": "github/Qiskit/rustworkx", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/rustworkx", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/rustworkx"}, {"uid": "github/nliulab/HRnV-Calc", "html_url": "https://rseng.github.io/software/repository/github/nliulab/HRnV-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/nliulab/HRnV-Calc"}, {"uid": "github/pangenome/smoothxg", "html_url": "https://rseng.github.io/software/repository/github/pangenome/smoothxg", "api_url": "https://rseng.github.io/software/api/repos/github/pangenome/smoothxg"}, {"uid": "github/rcarragh/c212", "html_url": "https://rseng.github.io/software/repository/github/rcarragh/c212", "api_url": "https://rseng.github.io/software/api/repos/github/rcarragh/c212"}, {"uid": "github/Juke34/AliNe", "html_url": "https://rseng.github.io/software/repository/github/Juke34/AliNe", "api_url": "https://rseng.github.io/software/api/repos/github/Juke34/AliNe"}, {"uid": "github/jgducoin/galclaim", "html_url": "https://rseng.github.io/software/repository/github/jgducoin/galclaim", "api_url": "https://rseng.github.io/software/api/repos/github/jgducoin/galclaim"}, {"uid": "github/yatiml/yatiml", "html_url": "https://rseng.github.io/software/repository/github/yatiml/yatiml", "api_url": "https://rseng.github.io/software/api/repos/github/yatiml/yatiml"}, {"uid": "github/mantzaris/LMDiskANN.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/LMDiskANN.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/LMDiskANN.jl"}, {"uid": "github/mantzaris/WunDeeDB.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/WunDeeDB.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/WunDeeDB.jl"}, {"uid": "github/mantzaris/BenchmarkDataNLP.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/BenchmarkDataNLP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/BenchmarkDataNLP.jl"}, {"uid": "github/bioexcel/biobb_wf_flexdyn", "html_url": "https://rseng.github.io/software/repository/github/bioexcel/biobb_wf_flexdyn", "api_url": "https://rseng.github.io/software/api/repos/github/bioexcel/biobb_wf_flexdyn"}, {"uid": "github/nevrome/bleiglas", "html_url": "https://rseng.github.io/software/repository/github/nevrome/bleiglas", "api_url": "https://rseng.github.io/software/api/repos/github/nevrome/bleiglas"}, {"uid": "github/FelixKrueger/TrimGalore", "html_url": "https://rseng.github.io/software/repository/github/FelixKrueger/TrimGalore", "api_url": "https://rseng.github.io/software/api/repos/github/FelixKrueger/TrimGalore"}, {"uid": "github/wajidarshad/ESIDE", "html_url": "https://rseng.github.io/software/repository/github/wajidarshad/ESIDE", "api_url": "https://rseng.github.io/software/api/repos/github/wajidarshad/ESIDE"}, {"uid": "github/yi-jia-li/cue", "html_url": "https://rseng.github.io/software/repository/github/yi-jia-li/cue", "api_url": "https://rseng.github.io/software/api/repos/github/yi-jia-li/cue"}, {"uid": "github/LabLaskin/MSIGen", "html_url": "https://rseng.github.io/software/repository/github/LabLaskin/MSIGen", "api_url": "https://rseng.github.io/software/api/repos/github/LabLaskin/MSIGen"}, {"uid": "github/rjtanner/StarburstPy", "html_url": "https://rseng.github.io/software/repository/github/rjtanner/StarburstPy", "api_url": "https://rseng.github.io/software/api/repos/github/rjtanner/StarburstPy"}, {"uid": "github/rreischke/OneCovariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/OneCovariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/OneCovariance"}, {"uid": "github/rreischke/frb_covariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/frb_covariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/frb_covariance"}, {"uid": "github/fair-workflows/nanopub", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/nanopub", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/nanopub"}, {"uid": "github/fair-workflows/NanopubJL", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/NanopubJL", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/NanopubJL"}, {"uid": "github/fair-workflows/fairworkflows", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/fairworkflows", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/fairworkflows"}, {"uid": "github/snijderlab/stitch", "html_url": "https://rseng.github.io/software/repository/github/snijderlab/stitch", "api_url": "https://rseng.github.io/software/api/repos/github/snijderlab/stitch"}, {"uid": "github/baptklein/ATMOSPHERIX_DATA_RED", "html_url": "https://rseng.github.io/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", "api_url": "https://rseng.github.io/software/api/repos/github/baptklein/ATMOSPHERIX_DATA_RED"}, {"uid": "github/OpenBioLink/Explorer", "html_url": "https://rseng.github.io/software/repository/github/OpenBioLink/Explorer", "api_url": "https://rseng.github.io/software/api/repos/github/OpenBioLink/Explorer"}, {"uid": "github/PeterBartram/TES", "html_url": "https://rseng.github.io/software/repository/github/PeterBartram/TES", "api_url": "https://rseng.github.io/software/api/repos/github/PeterBartram/TES"}, {"uid": "github/KIT-MBS/pyREX", "html_url": "https://rseng.github.io/software/repository/github/KIT-MBS/pyREX", "api_url": "https://rseng.github.io/software/api/repos/github/KIT-MBS/pyREX"}, {"uid": "github/CatarinaMMarques/FisherCosmology", "html_url": "https://rseng.github.io/software/repository/github/CatarinaMMarques/FisherCosmology", "api_url": "https://rseng.github.io/software/api/repos/github/CatarinaMMarques/FisherCosmology"}, {"uid": "github/julblarod/SOPHISM", "html_url": "https://rseng.github.io/software/repository/github/julblarod/SOPHISM", "api_url": "https://rseng.github.io/software/api/repos/github/julblarod/SOPHISM"}, {"uid": "github/Midnighter/dependency-info", "html_url": "https://rseng.github.io/software/repository/github/Midnighter/dependency-info", "api_url": "https://rseng.github.io/software/api/repos/github/Midnighter/dependency-info"}, {"uid": "github/epfl-radio-astro/LiSA", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/LiSA", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/LiSA"}, {"uid": "github/epfl-radio-astro/PINION", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/PINION", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/PINION"}, {"uid": "github/deniswerth/cosmoflow", "html_url": "https://rseng.github.io/software/repository/github/deniswerth/cosmoflow", "api_url": "https://rseng.github.io/software/api/repos/github/deniswerth/cosmoflow"}, {"uid": "github/dkn16/H21F", "html_url": "https://rseng.github.io/software/repository/github/dkn16/H21F", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/H21F"}, {"uid": "github/dkn16/Synax", "html_url": "https://rseng.github.io/software/repository/github/dkn16/Synax", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/Synax"}, {"uid": "github/watts-dev/watts", "html_url": "https://rseng.github.io/software/repository/github/watts-dev/watts", "api_url": "https://rseng.github.io/software/api/repos/github/watts-dev/watts"}, {"uid": "github/Beryl-Jingxin/PyExoCross", "html_url": "https://rseng.github.io/software/repository/github/Beryl-Jingxin/PyExoCross", "api_url": "https://rseng.github.io/software/api/repos/github/Beryl-Jingxin/PyExoCross"}, {"uid": "github/ISISNeutronMuon/quickBayes", "html_url": "https://rseng.github.io/software/repository/github/ISISNeutronMuon/quickBayes", "api_url": "https://rseng.github.io/software/api/repos/github/ISISNeutronMuon/quickBayes"}, {"uid": "github/BaroudLab/Griottes", "html_url": "https://rseng.github.io/software/repository/github/BaroudLab/Griottes", "api_url": "https://rseng.github.io/software/api/repos/github/BaroudLab/Griottes"}, {"uid": "github/sidchaini/DistClassiPy", "html_url": "https://rseng.github.io/software/repository/github/sidchaini/DistClassiPy", "api_url": "https://rseng.github.io/software/api/repos/github/sidchaini/DistClassiPy"}, {"uid": "github/OSU-BMBL/IDAM", "html_url": "https://rseng.github.io/software/repository/github/OSU-BMBL/IDAM", "api_url": "https://rseng.github.io/software/api/repos/github/OSU-BMBL/IDAM"}, {"uid": "github/NIFTI-Imaging/nifti_clib", "html_url": "https://rseng.github.io/software/repository/github/NIFTI-Imaging/nifti_clib", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTI-Imaging/nifti_clib"}, {"uid": "github/Via-Appia/via-appia-online-viewer", "html_url": "https://rseng.github.io/software/repository/github/Via-Appia/via-appia-online-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/Via-Appia/via-appia-online-viewer"}, {"uid": "github/blankhaar/PORTAL", "html_url": "https://rseng.github.io/software/repository/github/blankhaar/PORTAL", "api_url": "https://rseng.github.io/software/api/repos/github/blankhaar/PORTAL"}, {"uid": "github/schulze61/RhoPop", "html_url": "https://rseng.github.io/software/repository/github/schulze61/RhoPop", "api_url": "https://rseng.github.io/software/api/repos/github/schulze61/RhoPop"}, {"uid": "github/OncoRNALab/CiLiQuant", "html_url": "https://rseng.github.io/software/repository/github/OncoRNALab/CiLiQuant", "api_url": "https://rseng.github.io/software/api/repos/github/OncoRNALab/CiLiQuant"}, {"uid": "github/CAMI-challenge/CAMITAX", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/CAMITAX", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/CAMITAX"}, {"uid": "github/CAMI-challenge/AMBER", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/AMBER"}, {"uid": "github/tkerscher/blast", "html_url": "https://rseng.github.io/software/repository/github/tkerscher/blast", "api_url": "https://rseng.github.io/software/api/repos/github/tkerscher/blast"}, {"uid": "github/wasserman-group/pyCADMium", "html_url": "https://rseng.github.io/software/repository/github/wasserman-group/pyCADMium", "api_url": "https://rseng.github.io/software/api/repos/github/wasserman-group/pyCADMium"}, {"uid": "github/homerjed/sbgm", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbgm", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbgm"}, {"uid": "github/homerjed/sbiax", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbiax", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbiax"}, {"uid": "github/damar-wicaksono/uqtestfuns", "html_url": "https://rseng.github.io/software/repository/github/damar-wicaksono/uqtestfuns", "api_url": "https://rseng.github.io/software/api/repos/github/damar-wicaksono/uqtestfuns"}, {"uid": "github/rossfadely/star-galaxy-classification", "html_url": "https://rseng.github.io/software/repository/github/rossfadely/star-galaxy-classification", "api_url": "https://rseng.github.io/software/api/repos/github/rossfadely/star-galaxy-classification"}, {"uid": "github/Beuth-Erdelt/DBMS-Benchmarker", "html_url": "https://rseng.github.io/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", "api_url": "https://rseng.github.io/software/api/repos/github/Beuth-Erdelt/DBMS-Benchmarker"}, {"uid": "github/SimCab-CHU/ifCNVR", "html_url": "https://rseng.github.io/software/repository/github/SimCab-CHU/ifCNVR", "api_url": "https://rseng.github.io/software/api/repos/github/SimCab-CHU/ifCNVR"}, {"uid": "github/jts/nanopolish", "html_url": "https://rseng.github.io/software/repository/github/jts/nanopolish", "api_url": "https://rseng.github.io/software/api/repos/github/jts/nanopolish"}, {"uid": "github/jts/sga", "html_url": "https://rseng.github.io/software/repository/github/jts/sga", "api_url": "https://rseng.github.io/software/api/repos/github/jts/sga"}, {"uid": "github/ajshajib/dolphin", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/dolphin"}, {"uid": "github/ajshajib/LensingETC", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/LensingETC", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/LensingETC"}, {"uid": "github/metawards/MetaWards", "html_url": "https://rseng.github.io/software/repository/github/metawards/MetaWards", "api_url": "https://rseng.github.io/software/api/repos/github/metawards/MetaWards"}, {"uid": "github/CompGenomeLab/boquila", "html_url": "https://rseng.github.io/software/repository/github/CompGenomeLab/boquila", "api_url": "https://rseng.github.io/software/api/repos/github/CompGenomeLab/boquila"}, {"uid": "github/LucaMalavolta/CCFpams", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/CCFpams", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/CCFpams"}, {"uid": "github/LucaMalavolta/PyORBIT", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/PyORBIT", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/PyORBIT"}, {"uid": "github/damask-multiphysics/DAMASK", "html_url": "https://rseng.github.io/software/repository/github/damask-multiphysics/DAMASK", "api_url": "https://rseng.github.io/software/api/repos/github/damask-multiphysics/DAMASK"}, {"uid": "github/xxsds/DYNAMIC", "html_url": "https://rseng.github.io/software/repository/github/xxsds/DYNAMIC", "api_url": "https://rseng.github.io/software/api/repos/github/xxsds/DYNAMIC"}, {"uid": "github/jruffio/breads", "html_url": "https://rseng.github.io/software/repository/github/jruffio/breads", "api_url": "https://rseng.github.io/software/api/repos/github/jruffio/breads"}, {"uid": "github/delve-team/delve", "html_url": "https://rseng.github.io/software/repository/github/delve-team/delve", "api_url": "https://rseng.github.io/software/api/repos/github/delve-team/delve"}, {"uid": "github/INCF/one_click", "html_url": "https://rseng.github.io/software/repository/github/INCF/one_click", "api_url": "https://rseng.github.io/software/api/repos/github/INCF/one_click"}, {"uid": "github/Baohua-Chen/GFFx", "html_url": "https://rseng.github.io/software/repository/github/Baohua-Chen/GFFx", "api_url": "https://rseng.github.io/software/api/repos/github/Baohua-Chen/GFFx"}, {"uid": "github/qutip/qutip", "html_url": "https://rseng.github.io/software/repository/github/qutip/qutip", "api_url": "https://rseng.github.io/software/api/repos/github/qutip/qutip"}, {"uid": "github/ExoSim/ExoSimPublic", "html_url": "https://rseng.github.io/software/repository/github/ExoSim/ExoSimPublic", "api_url": "https://rseng.github.io/software/api/repos/github/ExoSim/ExoSimPublic"}, {"uid": "github/PaulKuin/uvotpy", "html_url": "https://rseng.github.io/software/repository/github/PaulKuin/uvotpy", "api_url": "https://rseng.github.io/software/api/repos/github/PaulKuin/uvotpy"}, {"uid": "github/baiyueh/PANINIpy", "html_url": "https://rseng.github.io/software/repository/github/baiyueh/PANINIpy", "api_url": "https://rseng.github.io/software/api/repos/github/baiyueh/PANINIpy"}, {"uid": "github/aothmane-control/Algebraic-differentiators", "html_url": "https://rseng.github.io/software/repository/github/aothmane-control/Algebraic-differentiators", "api_url": "https://rseng.github.io/software/api/repos/github/aothmane-control/Algebraic-differentiators"}, {"uid": "github/AlexMaraio/WeakLensingQML", "html_url": "https://rseng.github.io/software/repository/github/AlexMaraio/WeakLensingQML", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMaraio/WeakLensingQML"}, {"uid": "github/alexandercoulter/fastfrechet", "html_url": "https://rseng.github.io/software/repository/github/alexandercoulter/fastfrechet", "api_url": "https://rseng.github.io/software/api/repos/github/alexandercoulter/fastfrechet"}, {"uid": "github/mlr-org/mcboost", "html_url": "https://rseng.github.io/software/repository/github/mlr-org/mcboost", "api_url": "https://rseng.github.io/software/api/repos/github/mlr-org/mcboost"}, {"uid": "github/KCL-BMEIS/NiftySeg", "html_url": "https://rseng.github.io/software/repository/github/KCL-BMEIS/NiftySeg", "api_url": "https://rseng.github.io/software/api/repos/github/KCL-BMEIS/NiftySeg"}, {"uid": "github/predsci/OFT", "html_url": "https://rseng.github.io/software/repository/github/predsci/OFT", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/OFT"}, {"uid": "github/predsci/hipft", "html_url": "https://rseng.github.io/software/repository/github/predsci/hipft", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/hipft"}, {"uid": "github/joshspeagle/dynesty", "html_url": "https://rseng.github.io/software/repository/github/joshspeagle/dynesty", "api_url": "https://rseng.github.io/software/api/repos/github/joshspeagle/dynesty"}, {"uid": "github/METHODS-Group/DRDMannTurb", "html_url": "https://rseng.github.io/software/repository/github/METHODS-Group/DRDMannTurb", "api_url": "https://rseng.github.io/software/api/repos/github/METHODS-Group/DRDMannTurb"}, {"uid": "github/zclaytor/butterpy", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/butterpy", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/butterpy"}, {"uid": "github/zclaytor/kiauhoku", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/kiauhoku", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/kiauhoku"}, {"uid": "github/stefanoMP/massiveGST", "html_url": "https://rseng.github.io/software/repository/github/stefanoMP/massiveGST", "api_url": "https://rseng.github.io/software/api/repos/github/stefanoMP/massiveGST"}, {"uid": "github/markusbonse/applefy", "html_url": "https://rseng.github.io/software/repository/github/markusbonse/applefy", "api_url": "https://rseng.github.io/software/api/repos/github/markusbonse/applefy"}, {"uid": "github/inpefess/gym-saturation", "html_url": "https://rseng.github.io/software/repository/github/inpefess/gym-saturation", "api_url": "https://rseng.github.io/software/api/repos/github/inpefess/gym-saturation"}, {"uid": "github/masoncarney/stepped_luneburg", "html_url": "https://rseng.github.io/software/repository/github/masoncarney/stepped_luneburg", "api_url": "https://rseng.github.io/software/api/repos/github/masoncarney/stepped_luneburg"}, {"uid": "github/ccsb-scripps/Illustrate", "html_url": "https://rseng.github.io/software/repository/github/ccsb-scripps/Illustrate", "api_url": "https://rseng.github.io/software/api/repos/github/ccsb-scripps/Illustrate"}, {"uid": "github/ComplexGroupInteractions/xgi", "html_url": "https://rseng.github.io/software/repository/github/ComplexGroupInteractions/xgi", "api_url": "https://rseng.github.io/software/api/repos/github/ComplexGroupInteractions/xgi"}, {"uid": "github/karel-brinda/ococo", "html_url": "https://rseng.github.io/software/repository/github/karel-brinda/ococo", "api_url": "https://rseng.github.io/software/api/repos/github/karel-brinda/ococo"}, {"uid": "github/GoelandProver/Goeland", "html_url": "https://rseng.github.io/software/repository/github/GoelandProver/Goeland", "api_url": "https://rseng.github.io/software/api/repos/github/GoelandProver/Goeland"}, {"uid": "github/synchrofit/synchrofit", "html_url": "https://rseng.github.io/software/repository/github/synchrofit/synchrofit", "api_url": "https://rseng.github.io/software/api/repos/github/synchrofit/synchrofit"}, {"uid": "github/cweniger/swordfish", "html_url": "https://rseng.github.io/software/repository/github/cweniger/swordfish", "api_url": "https://rseng.github.io/software/api/repos/github/cweniger/swordfish"}, {"uid": "github/sblunt/orbitize", "html_url": "https://rseng.github.io/software/repository/github/sblunt/orbitize", "api_url": "https://rseng.github.io/software/api/repos/github/sblunt/orbitize"}, {"uid": "github/hveerten/katu", "html_url": "https://rseng.github.io/software/repository/github/hveerten/katu", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/katu"}, {"uid": "github/hveerten/boxfit", "html_url": "https://rseng.github.io/software/repository/github/hveerten/boxfit", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/boxfit"}, {"uid": "github/cheginit/HyRiver", "html_url": "https://rseng.github.io/software/repository/github/cheginit/HyRiver", "api_url": "https://rseng.github.io/software/api/repos/github/cheginit/HyRiver"}, {"uid": "github/jakeown/astroclover", "html_url": "https://rseng.github.io/software/repository/github/jakeown/astroclover", "api_url": "https://rseng.github.io/software/api/repos/github/jakeown/astroclover"}, {"uid": "github/cochran4/GEMB", "html_url": "https://rseng.github.io/software/repository/github/cochran4/GEMB", "api_url": "https://rseng.github.io/software/api/repos/github/cochran4/GEMB"}, {"uid": "github/0satoken/Eclairs", "html_url": "https://rseng.github.io/software/repository/github/0satoken/Eclairs", "api_url": "https://rseng.github.io/software/api/repos/github/0satoken/Eclairs"}, {"uid": "github/gsuissa/hardCORE", "html_url": "https://rseng.github.io/software/repository/github/gsuissa/hardCORE", "api_url": "https://rseng.github.io/software/api/repos/github/gsuissa/hardCORE"}, {"uid": "github/DrJieZheng/meanoffset", "html_url": "https://rseng.github.io/software/repository/github/DrJieZheng/meanoffset", "api_url": "https://rseng.github.io/software/api/repos/github/DrJieZheng/meanoffset"}, {"uid": "github/phirling/pyc2ray", "html_url": "https://rseng.github.io/software/repository/github/phirling/pyc2ray", "api_url": "https://rseng.github.io/software/api/repos/github/phirling/pyc2ray"}, {"uid": "github/AP6YC/AdaptiveResonance.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/AdaptiveResonance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/AdaptiveResonance.jl"}, {"uid": "github/AP6YC/ClusterValidityIndices.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/ClusterValidityIndices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/ClusterValidityIndices.jl"}, {"uid": "github/ArtRand/signalAlign", "html_url": "https://rseng.github.io/software/repository/github/ArtRand/signalAlign", "api_url": "https://rseng.github.io/software/api/repos/github/ArtRand/signalAlign"}, {"uid": "github/ycwu1030/EvoEMD", "html_url": "https://rseng.github.io/software/repository/github/ycwu1030/EvoEMD", "api_url": "https://rseng.github.io/software/api/repos/github/ycwu1030/EvoEMD"}, {"uid": "github/lantunes/cellpylib", "html_url": "https://rseng.github.io/software/repository/github/lantunes/cellpylib", "api_url": "https://rseng.github.io/software/api/repos/github/lantunes/cellpylib"}, {"uid": "github/AlexanderJuestel/pyheatdemand", "html_url": "https://rseng.github.io/software/repository/github/AlexanderJuestel/pyheatdemand", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderJuestel/pyheatdemand"}, {"uid": "github/Aravind-Sundararajan/MocoExtendProblem", "html_url": "https://rseng.github.io/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", "api_url": "https://rseng.github.io/software/api/repos/github/Aravind-Sundararajan/MocoExtendProblem"}, {"uid": "github/sjbeckett/localcovid19now", "html_url": "https://rseng.github.io/software/repository/github/sjbeckett/localcovid19now", "api_url": "https://rseng.github.io/software/api/repos/github/sjbeckett/localcovid19now"}, {"uid": "github/graphnet-team/graphnet", "html_url": "https://rseng.github.io/software/repository/github/graphnet-team/graphnet", "api_url": "https://rseng.github.io/software/api/repos/github/graphnet-team/graphnet"}, {"uid": "github/sims-lab/CapCruncher", "html_url": "https://rseng.github.io/software/repository/github/sims-lab/CapCruncher", "api_url": "https://rseng.github.io/software/api/repos/github/sims-lab/CapCruncher"}, {"uid": "github/biolab-unige/nifti2dicom", "html_url": "https://rseng.github.io/software/repository/github/biolab-unige/nifti2dicom", "api_url": "https://rseng.github.io/software/api/repos/github/biolab-unige/nifti2dicom"}, {"uid": "github/rkingsbury/pyEQL", "html_url": "https://rseng.github.io/software/repository/github/rkingsbury/pyEQL", "api_url": "https://rseng.github.io/software/api/repos/github/rkingsbury/pyEQL"}, {"uid": "github/devsim/devsim", "html_url": "https://rseng.github.io/software/repository/github/devsim/devsim", "api_url": "https://rseng.github.io/software/api/repos/github/devsim/devsim"}, {"uid": "github/aringlis/afino_release_version", "html_url": "https://rseng.github.io/software/repository/github/aringlis/afino_release_version", "api_url": "https://rseng.github.io/software/api/repos/github/aringlis/afino_release_version"}, {"uid": "github/pymatting/pymatting", "html_url": "https://rseng.github.io/software/repository/github/pymatting/pymatting", "api_url": "https://rseng.github.io/software/api/repos/github/pymatting/pymatting"}, {"uid": "github/AgentM-GEG/residual_feature_extraction", "html_url": "https://rseng.github.io/software/repository/github/AgentM-GEG/residual_feature_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/AgentM-GEG/residual_feature_extraction"}, {"uid": "github/mecobpsu/bacseq", "html_url": "https://rseng.github.io/software/repository/github/mecobpsu/bacseq", "api_url": "https://rseng.github.io/software/api/repos/github/mecobpsu/bacseq"}, {"uid": "github/astrocaroline/opacity-wizard", "html_url": "https://rseng.github.io/software/repository/github/astrocaroline/opacity-wizard", "api_url": "https://rseng.github.io/software/api/repos/github/astrocaroline/opacity-wizard"}, {"uid": "github/wadpac/GGIR", "html_url": "https://rseng.github.io/software/repository/github/wadpac/GGIR", "api_url": "https://rseng.github.io/software/api/repos/github/wadpac/GGIR"}, {"uid": "github/Kingsford-Group/scallop", "html_url": "https://rseng.github.io/software/repository/github/Kingsford-Group/scallop", "api_url": "https://rseng.github.io/software/api/repos/github/Kingsford-Group/scallop"}, {"uid": "github/ethz-randomwalk/polytopewalk", "html_url": "https://rseng.github.io/software/repository/github/ethz-randomwalk/polytopewalk", "api_url": "https://rseng.github.io/software/api/repos/github/ethz-randomwalk/polytopewalk"}, {"uid": "github/souzamonteiro/cnatool", "html_url": "https://rseng.github.io/software/repository/github/souzamonteiro/cnatool", "api_url": "https://rseng.github.io/software/api/repos/github/souzamonteiro/cnatool"}, {"uid": "github/UU-ER/AdOpT-NET0", "html_url": "https://rseng.github.io/software/repository/github/UU-ER/AdOpT-NET0", "api_url": "https://rseng.github.io/software/api/repos/github/UU-ER/AdOpT-NET0"}, {"uid": "github/stillwater-sc/universal", "html_url": "https://rseng.github.io/software/repository/github/stillwater-sc/universal", "api_url": "https://rseng.github.io/software/api/repos/github/stillwater-sc/universal"}, {"uid": "github/aranyics/ReDCM", "html_url": "https://rseng.github.io/software/repository/github/aranyics/ReDCM", "api_url": "https://rseng.github.io/software/api/repos/github/aranyics/ReDCM"}, {"uid": "github/spjuhel/BoARIO", "html_url": "https://rseng.github.io/software/repository/github/spjuhel/BoARIO", "api_url": "https://rseng.github.io/software/api/repos/github/spjuhel/BoARIO"}, {"uid": "github/PanKonstantinos/MEvA-X", "html_url": "https://rseng.github.io/software/repository/github/PanKonstantinos/MEvA-X", "api_url": "https://rseng.github.io/software/api/repos/github/PanKonstantinos/MEvA-X"}, {"uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "html_url": "https://rseng.github.io/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "api_url": "https://rseng.github.io/software/api/repos/github/bengeof/QPoweredCompound2DeNovoDrugPropMax"}, {"uid": "github/nextstrain/auspice", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/auspice", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/auspice"}, {"uid": "github/nextstrain/augur", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/augur", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/augur"}, {"uid": "github/nextstrain/nextclade", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/nextclade", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/nextclade"}, {"uid": "github/JamesPaynter/PyGRB", "html_url": "https://rseng.github.io/software/repository/github/JamesPaynter/PyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/JamesPaynter/PyGRB"}, {"uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "html_url": "https://rseng.github.io/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "api_url": "https://rseng.github.io/software/api/repos/github/NCAR/NCAR-Classic-Libraries-for-Geophysics"}, {"uid": "github/ZhaiLab-SUSTech/FLEPSeq", "html_url": "https://rseng.github.io/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaiLab-SUSTech/FLEPSeq"}, {"uid": "github/m-dadej/MarSwitching.jl", "html_url": "https://rseng.github.io/software/repository/github/m-dadej/MarSwitching.jl", "api_url": "https://rseng.github.io/software/api/repos/github/m-dadej/MarSwitching.jl"}, {"uid": "github/David-McKenna/udpPacketManager", "html_url": "https://rseng.github.io/software/repository/github/David-McKenna/udpPacketManager", "api_url": "https://rseng.github.io/software/api/repos/github/David-McKenna/udpPacketManager"}, {"uid": "github/NERDSITU/superblockify", "html_url": "https://rseng.github.io/software/repository/github/NERDSITU/superblockify", "api_url": "https://rseng.github.io/software/api/repos/github/NERDSITU/superblockify"}, {"uid": "github/VincentAlcazer/StatAid", "html_url": "https://rseng.github.io/software/repository/github/VincentAlcazer/StatAid", "api_url": "https://rseng.github.io/software/api/repos/github/VincentAlcazer/StatAid"}, {"uid": "github/BackmanLab/PWSpy", "html_url": "https://rseng.github.io/software/repository/github/BackmanLab/PWSpy", "api_url": "https://rseng.github.io/software/api/repos/github/BackmanLab/PWSpy"}, {"uid": "github/onsala-space-observatory/astromorph", "html_url": "https://rseng.github.io/software/repository/github/onsala-space-observatory/astromorph", "api_url": "https://rseng.github.io/software/api/repos/github/onsala-space-observatory/astromorph"}, {"uid": "github/csj607/STaRS", "html_url": "https://rseng.github.io/software/repository/github/csj607/STaRS", "api_url": "https://rseng.github.io/software/api/repos/github/csj607/STaRS"}, {"uid": "github/bcbio/bcbio.variation.recall", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio.variation.recall", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio.variation.recall"}, {"uid": "github/bcbio/bcbio-nextgen", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio-nextgen", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio-nextgen"}, {"uid": "github/abinit/abinit", "html_url": "https://rseng.github.io/software/repository/github/abinit/abinit", "api_url": "https://rseng.github.io/software/api/repos/github/abinit/abinit"}, {"uid": "github/JensUweUlrich/ReadBouncer", "html_url": "https://rseng.github.io/software/repository/github/JensUweUlrich/ReadBouncer", "api_url": "https://rseng.github.io/software/api/repos/github/JensUweUlrich/ReadBouncer"}, {"uid": "github/aertslab/pySCENIC", "html_url": "https://rseng.github.io/software/repository/github/aertslab/pySCENIC", "api_url": "https://rseng.github.io/software/api/repos/github/aertslab/pySCENIC"}, {"uid": "github/BleekerLab/PhenoFeatureFinder", "html_url": "https://rseng.github.io/software/repository/github/BleekerLab/PhenoFeatureFinder", "api_url": "https://rseng.github.io/software/api/repos/github/BleekerLab/PhenoFeatureFinder"}, {"uid": "github/mbhall88/rasusa", "html_url": "https://rseng.github.io/software/repository/github/mbhall88/rasusa", "api_url": "https://rseng.github.io/software/api/repos/github/mbhall88/rasusa"}, {"uid": "github/AstroChem/VISIBLE", "html_url": "https://rseng.github.io/software/repository/github/AstroChem/VISIBLE", "api_url": "https://rseng.github.io/software/api/repos/github/AstroChem/VISIBLE"}, {"uid": "github/latrop/DECA", "html_url": "https://rseng.github.io/software/repository/github/latrop/DECA", "api_url": "https://rseng.github.io/software/api/repos/github/latrop/DECA"}, {"uid": "github/inab/trimal", "html_url": "https://rseng.github.io/software/repository/github/inab/trimal", "api_url": "https://rseng.github.io/software/api/repos/github/inab/trimal"}, {"uid": "github/Varnani/pywd2015-qt5", "html_url": "https://rseng.github.io/software/repository/github/Varnani/pywd2015-qt5", "api_url": "https://rseng.github.io/software/api/repos/github/Varnani/pywd2015-qt5"}, {"uid": "github/birnstiel/two-pop-py", "html_url": "https://rseng.github.io/software/repository/github/birnstiel/two-pop-py", "api_url": "https://rseng.github.io/software/api/repos/github/birnstiel/two-pop-py"}, {"uid": "github/polca/pathways", "html_url": "https://rseng.github.io/software/repository/github/polca/pathways", "api_url": "https://rseng.github.io/software/api/repos/github/polca/pathways"}, {"uid": "github/polca/unfold", "html_url": "https://rseng.github.io/software/repository/github/polca/unfold", "api_url": "https://rseng.github.io/software/api/repos/github/polca/unfold"}, {"uid": "github/jstuecker/adiabatic-tides", "html_url": "https://rseng.github.io/software/repository/github/jstuecker/adiabatic-tides", "api_url": "https://rseng.github.io/software/api/repos/github/jstuecker/adiabatic-tides"}, {"uid": "github/veg/hivtrace", "html_url": "https://rseng.github.io/software/repository/github/veg/hivtrace", "api_url": "https://rseng.github.io/software/api/repos/github/veg/hivtrace"}, {"uid": "github/veg/tn93", "html_url": "https://rseng.github.io/software/repository/github/veg/tn93", "api_url": "https://rseng.github.io/software/api/repos/github/veg/tn93"}, {"uid": "github/Weeks-UNC/RingMapper", "html_url": "https://rseng.github.io/software/repository/github/Weeks-UNC/RingMapper", "api_url": "https://rseng.github.io/software/api/repos/github/Weeks-UNC/RingMapper"}, {"uid": "github/VChristiaens/special", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/special", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/special"}, {"uid": "github/VChristiaens/MINDS", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/MINDS", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/MINDS"}, {"uid": "github/VChristiaens/vcal_sphere", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/vcal_sphere", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/vcal_sphere"}, {"uid": "github/medvedevgroup/varmatch", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/varmatch", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/varmatch"}, {"uid": "github/medvedevgroup/TwoPaCo", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/TwoPaCo", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/TwoPaCo"}, {"uid": "github/konkolyseismolab/seismolab", "html_url": "https://rseng.github.io/software/repository/github/konkolyseismolab/seismolab", "api_url": "https://rseng.github.io/software/api/repos/github/konkolyseismolab/seismolab"}, {"uid": "github/nach00gar/16SMicrobiomeMLFS", "html_url": "https://rseng.github.io/software/repository/github/nach00gar/16SMicrobiomeMLFS", "api_url": "https://rseng.github.io/software/api/repos/github/nach00gar/16SMicrobiomeMLFS"}, {"uid": "github/jiangyuts/facetclumps", "html_url": "https://rseng.github.io/software/repository/github/jiangyuts/facetclumps", "api_url": "https://rseng.github.io/software/api/repos/github/jiangyuts/facetclumps"}, {"uid": "github/fritzsedlazeck/Sniffles", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/Sniffles", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/Sniffles"}, {"uid": "github/fritzsedlazeck/SURVIVOR", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/SURVIVOR", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/SURVIVOR"}, {"uid": "github/maps-as-data/MapReader", "html_url": "https://rseng.github.io/software/repository/github/maps-as-data/MapReader", "api_url": "https://rseng.github.io/software/api/repos/github/maps-as-data/MapReader"}, {"uid": "github/spinicist/riesling", "html_url": "https://rseng.github.io/software/repository/github/spinicist/riesling", "api_url": "https://rseng.github.io/software/api/repos/github/spinicist/riesling"}, {"uid": "github/AA-ALERT/frbcatdb", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcatdb", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcatdb"}, {"uid": "github/AA-ALERT/Dedispersion", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/Dedispersion", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/Dedispersion"}, {"uid": "github/AA-ALERT/AstroData", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AstroData", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AstroData"}, {"uid": "github/AA-ALERT/AMBER", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AMBER"}, {"uid": "github/AA-ALERT/frbcat-web", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcat-web", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcat-web"}, {"uid": "github/hpc-maths/samurai", "html_url": "https://rseng.github.io/software/repository/github/hpc-maths/samurai", "api_url": "https://rseng.github.io/software/api/repos/github/hpc-maths/samurai"}, {"uid": "github/ndaniyar/aphot", "html_url": "https://rseng.github.io/software/repository/github/ndaniyar/aphot", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniyar/aphot"}, {"uid": "github/KostasValeckas/PyLongslit", "html_url": "https://rseng.github.io/software/repository/github/KostasValeckas/PyLongslit", "api_url": "https://rseng.github.io/software/api/repos/github/KostasValeckas/PyLongslit"}, {"uid": "github/tberlok/paicos", "html_url": "https://rseng.github.io/software/repository/github/tberlok/paicos", "api_url": "https://rseng.github.io/software/api/repos/github/tberlok/paicos"}, {"uid": "github/Arpitk1001/RotCurveTool", "html_url": "https://rseng.github.io/software/repository/github/Arpitk1001/RotCurveTool", "api_url": "https://rseng.github.io/software/api/repos/github/Arpitk1001/RotCurveTool"}, {"uid": "github/zengzhenhuan/GFNet", "html_url": "https://rseng.github.io/software/repository/github/zengzhenhuan/GFNet", "api_url": "https://rseng.github.io/software/api/repos/github/zengzhenhuan/GFNet"}, {"uid": "github/aalhossary/pyemgpipeline", "html_url": "https://rseng.github.io/software/repository/github/aalhossary/pyemgpipeline", "api_url": "https://rseng.github.io/software/api/repos/github/aalhossary/pyemgpipeline"}, {"uid": "github/reproducible-biomedical-modeling/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/reproducible-biomedical-modeling/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/reproducible-biomedical-modeling/Biosimulations"}, {"uid": "github/carnotresearch/cr-sparse", "html_url": "https://rseng.github.io/software/repository/github/carnotresearch/cr-sparse", "api_url": "https://rseng.github.io/software/api/repos/github/carnotresearch/cr-sparse"}, {"uid": "github/a8864666-rgb/fgoc", "html_url": "https://rseng.github.io/software/repository/github/a8864666-rgb/fgoc", "api_url": "https://rseng.github.io/software/api/repos/github/a8864666-rgb/fgoc"}, {"uid": "github/auctus-team/pycapacity", "html_url": "https://rseng.github.io/software/repository/github/auctus-team/pycapacity", "api_url": "https://rseng.github.io/software/api/repos/github/auctus-team/pycapacity"}, {"uid": "github/AstraZeneca/kallisto", "html_url": "https://rseng.github.io/software/repository/github/AstraZeneca/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/AstraZeneca/kallisto"}, {"uid": "github/byuflowlab/GXBeam.jl", "html_url": "https://rseng.github.io/software/repository/github/byuflowlab/GXBeam.jl", "api_url": "https://rseng.github.io/software/api/repos/github/byuflowlab/GXBeam.jl"}, {"uid": "github/dipol-uf/DIPOL-UF", "html_url": "https://rseng.github.io/software/repository/github/dipol-uf/DIPOL-UF", "api_url": "https://rseng.github.io/software/api/repos/github/dipol-uf/DIPOL-UF"}, {"uid": "github/wanpinglee/MOSAIK", "html_url": "https://rseng.github.io/software/repository/github/wanpinglee/MOSAIK", "api_url": "https://rseng.github.io/software/api/repos/github/wanpinglee/MOSAIK"}, {"uid": "github/AlexMikes/AutoFunc", "html_url": "https://rseng.github.io/software/repository/github/AlexMikes/AutoFunc", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMikes/AutoFunc"}, {"uid": "github/HUST-NingKang-Lab/ONN4MST", "html_url": "https://rseng.github.io/software/repository/github/HUST-NingKang-Lab/ONN4MST", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-NingKang-Lab/ONN4MST"}, {"uid": "github/henrysky/astroNN", "html_url": "https://rseng.github.io/software/repository/github/henrysky/astroNN", "api_url": "https://rseng.github.io/software/api/repos/github/henrysky/astroNN"}, {"uid": "github/mattpitkin/lintegrate", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/lintegrate", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/lintegrate"}, {"uid": "github/mattpitkin/psrqpy", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/psrqpy", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/psrqpy"}, {"uid": "github/koide3/small_gicp", "html_url": "https://rseng.github.io/software/repository/github/koide3/small_gicp", "api_url": "https://rseng.github.io/software/api/repos/github/koide3/small_gicp"}, {"uid": "github/h3abionet/genesis2", "html_url": "https://rseng.github.io/software/repository/github/h3abionet/genesis2", "api_url": "https://rseng.github.io/software/api/repos/github/h3abionet/genesis2"}, {"uid": "github/johnschwenck/bp", "html_url": "https://rseng.github.io/software/repository/github/johnschwenck/bp", "api_url": "https://rseng.github.io/software/api/repos/github/johnschwenck/bp"}, {"uid": "github/mahulchak/quickmerge", "html_url": "https://rseng.github.io/software/repository/github/mahulchak/quickmerge", "api_url": "https://rseng.github.io/software/api/repos/github/mahulchak/quickmerge"}, {"uid": "github/oncoray/mirp", "html_url": "https://rseng.github.io/software/repository/github/oncoray/mirp", "api_url": "https://rseng.github.io/software/api/repos/github/oncoray/mirp"}, {"uid": "github/nanakiksc/zerone", "html_url": "https://rseng.github.io/software/repository/github/nanakiksc/zerone", "api_url": "https://rseng.github.io/software/api/repos/github/nanakiksc/zerone"}, {"uid": "github/paulbrodersen/netgraph", "html_url": "https://rseng.github.io/software/repository/github/paulbrodersen/netgraph", "api_url": "https://rseng.github.io/software/api/repos/github/paulbrodersen/netgraph"}, {"uid": "github/ahudde/greeks", "html_url": "https://rseng.github.io/software/repository/github/ahudde/greeks", "api_url": "https://rseng.github.io/software/api/repos/github/ahudde/greeks"}, {"uid": "github/will-rowe/hulk", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/hulk", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/hulk"}, {"uid": "github/will-rowe/groot", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/groot", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/groot"}, {"uid": "github/daniel-muthukrishna/astrodash", "html_url": "https://rseng.github.io/software/repository/github/daniel-muthukrishna/astrodash", "api_url": "https://rseng.github.io/software/api/repos/github/daniel-muthukrishna/astrodash"}, {"uid": "github/qcxms/QCxMS", "html_url": "https://rseng.github.io/software/repository/github/qcxms/QCxMS", "api_url": "https://rseng.github.io/software/api/repos/github/qcxms/QCxMS"}, {"uid": "github/OpenGene/fastplong", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastplong", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastplong"}, {"uid": "github/OpenGene/fastv", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastv", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastv"}, {"uid": "github/OpenGene/fastp", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastp", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastp"}, {"uid": "github/OpenGene/repaq", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/repaq", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/repaq"}, {"uid": "github/mingzehuang/latentcor", "html_url": "https://rseng.github.io/software/repository/github/mingzehuang/latentcor", "api_url": "https://rseng.github.io/software/api/repos/github/mingzehuang/latentcor"}, {"uid": "github/temken/obscura", "html_url": "https://rseng.github.io/software/repository/github/temken/obscura", "api_url": "https://rseng.github.io/software/api/repos/github/temken/obscura"}, {"uid": "github/temken/DaMaSCUS", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS"}, {"uid": "github/temken/Dirac_vs_Majorana", "html_url": "https://rseng.github.io/software/repository/github/temken/Dirac_vs_Majorana", "api_url": "https://rseng.github.io/software/api/repos/github/temken/Dirac_vs_Majorana"}, {"uid": "github/temken/DaMaSCUS-CRUST", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-CRUST", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-CRUST"}, {"uid": "github/temken/DaMaSCUS-SUN", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-SUN", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-SUN"}, {"uid": "github/temken/DarkARC", "html_url": "https://rseng.github.io/software/repository/github/temken/DarkARC", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DarkARC"}, {"uid": "github/jls713/tact", "html_url": "https://rseng.github.io/software/repository/github/jls713/tact", "api_url": "https://rseng.github.io/software/api/repos/github/jls713/tact"}, {"uid": "github/UBC-Astrophysics/kd-match", "html_url": "https://rseng.github.io/software/repository/github/UBC-Astrophysics/kd-match", "api_url": "https://rseng.github.io/software/api/repos/github/UBC-Astrophysics/kd-match"}, {"uid": "github/biocore-ntnu/pyranges", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/pyranges", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/pyranges"}, {"uid": "github/biocore-ntnu/ncls", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/ncls", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/ncls"}, {"uid": "github/biocore-ntnu/epic2", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/epic2", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/epic2"}, {"uid": "github/mrirecon/view", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/view", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/view"}, {"uid": "github/mrirecon/bart", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/bart", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/bart"}, {"uid": "github/eabaron/synow", "html_url": "https://rseng.github.io/software/repository/github/eabaron/synow", "api_url": "https://rseng.github.io/software/api/repos/github/eabaron/synow"}, {"uid": "github/david-mathews-1994/deltarice", "html_url": "https://rseng.github.io/software/repository/github/david-mathews-1994/deltarice", "api_url": "https://rseng.github.io/software/api/repos/github/david-mathews-1994/deltarice"}, {"uid": "github/metagenlab/assembly_finder", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/assembly_finder", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/assembly_finder"}, {"uid": "github/metagenlab/MeSS", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/MeSS", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/MeSS"}, {"uid": "github/david-bogdan-r/ARTEMIS", "html_url": "https://rseng.github.io/software/repository/github/david-bogdan-r/ARTEMIS", "api_url": "https://rseng.github.io/software/api/repos/github/david-bogdan-r/ARTEMIS"}, {"uid": "github/bblodfon/emba", "html_url": "https://rseng.github.io/software/repository/github/bblodfon/emba", "api_url": "https://rseng.github.io/software/api/repos/github/bblodfon/emba"}, {"uid": "github/krober10nd/SeismicMesh", "html_url": "https://rseng.github.io/software/repository/github/krober10nd/SeismicMesh", "api_url": "https://rseng.github.io/software/api/repos/github/krober10nd/SeismicMesh"}, {"uid": "github/gtonkinhill/fastbaps", "html_url": "https://rseng.github.io/software/repository/github/gtonkinhill/fastbaps", "api_url": "https://rseng.github.io/software/api/repos/github/gtonkinhill/fastbaps"}, {"uid": "github/christopherlovell/sengi", "html_url": "https://rseng.github.io/software/repository/github/christopherlovell/sengi", "api_url": "https://rseng.github.io/software/api/repos/github/christopherlovell/sengi"}, {"uid": "github/Ramialison-Lab-ARMI/3DCardiomics", "html_url": "https://rseng.github.io/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", "api_url": "https://rseng.github.io/software/api/repos/github/Ramialison-Lab-ARMI/3DCardiomics"}, {"uid": "github/p-slash/qsonic", "html_url": "https://rseng.github.io/software/repository/github/p-slash/qsonic", "api_url": "https://rseng.github.io/software/api/repos/github/p-slash/qsonic"}, {"uid": "github/susiegriggo/Phynteny_transformer", "html_url": "https://rseng.github.io/software/repository/github/susiegriggo/Phynteny_transformer", "api_url": "https://rseng.github.io/software/api/repos/github/susiegriggo/Phynteny_transformer"}, {"uid": "github/jranalli/solartoolbox", "html_url": "https://rseng.github.io/software/repository/github/jranalli/solartoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/jranalli/solartoolbox"}, {"uid": "github/biboyd/SALSA", "html_url": "https://rseng.github.io/software/repository/github/biboyd/SALSA", "api_url": "https://rseng.github.io/software/api/repos/github/biboyd/SALSA"}, {"uid": "github/mpc-bioinformatics/CalibraCurve", "html_url": "https://rseng.github.io/software/repository/github/mpc-bioinformatics/CalibraCurve", "api_url": "https://rseng.github.io/software/api/repos/github/mpc-bioinformatics/CalibraCurve"}, {"uid": "github/PetervanLunteren/EcoAssist", "html_url": "https://rseng.github.io/software/repository/github/PetervanLunteren/EcoAssist", "api_url": "https://rseng.github.io/software/api/repos/github/PetervanLunteren/EcoAssist"}, {"uid": "github/sorenwacker/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/sorenwacker/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/sorenwacker/ProteomicsQC"}, {"uid": "github/vembrane/vembrane", "html_url": "https://rseng.github.io/software/repository/github/vembrane/vembrane", "api_url": "https://rseng.github.io/software/api/repos/github/vembrane/vembrane"}, {"uid": "github/lh3/bioawk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bioawk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bioawk"}, {"uid": "github/lh3/minimap2", "html_url": "https://rseng.github.io/software/repository/github/lh3/minimap2", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/minimap2"}, {"uid": "github/lh3/wgsim", "html_url": "https://rseng.github.io/software/repository/github/lh3/wgsim", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/wgsim"}, {"uid": "github/lh3/bgt", "html_url": "https://rseng.github.io/software/repository/github/lh3/bgt", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bgt"}, {"uid": "github/lh3/seqtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/seqtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/seqtk"}, {"uid": "github/lh3/miniasm", "html_url": "https://rseng.github.io/software/repository/github/lh3/miniasm", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/miniasm"}, {"uid": "github/lh3/fermi-lite", "html_url": "https://rseng.github.io/software/repository/github/lh3/fermi-lite", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/fermi-lite"}, {"uid": "github/lh3/bfc", "html_url": "https://rseng.github.io/software/repository/github/lh3/bfc", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bfc"}, {"uid": "github/lh3/bedtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bedtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bedtk"}, {"uid": "github/XSLiuLab/Seq2Neo", "html_url": "https://rseng.github.io/software/repository/github/XSLiuLab/Seq2Neo", "api_url": "https://rseng.github.io/software/api/repos/github/XSLiuLab/Seq2Neo"}, {"uid": "github/MaceKuailv/seaduck", "html_url": "https://rseng.github.io/software/repository/github/MaceKuailv/seaduck", "api_url": "https://rseng.github.io/software/api/repos/github/MaceKuailv/seaduck"}, {"uid": "github/tpapp/MCMCDiagnostics.jl", "html_url": "https://rseng.github.io/software/repository/github/tpapp/MCMCDiagnostics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tpapp/MCMCDiagnostics.jl"}, {"uid": "github/afukushima/DiffCorr", "html_url": "https://rseng.github.io/software/repository/github/afukushima/DiffCorr", "api_url": "https://rseng.github.io/software/api/repos/github/afukushima/DiffCorr"}, {"uid": "github/ReGIS-org/regis-v2", "html_url": "https://rseng.github.io/software/repository/github/ReGIS-org/regis-v2", "api_url": "https://rseng.github.io/software/api/repos/github/ReGIS-org/regis-v2"}, {"uid": "github/ArgoCanada/argodata", "html_url": "https://rseng.github.io/software/repository/github/ArgoCanada/argodata", "api_url": "https://rseng.github.io/software/api/repos/github/ArgoCanada/argodata"}, {"uid": "github/Samreay/Marz", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Marz", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Marz"}, {"uid": "github/Samreay/Barry", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Barry", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Barry"}, {"uid": "github/Samreay/ChainConsumer", "html_url": "https://rseng.github.io/software/repository/github/Samreay/ChainConsumer", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/ChainConsumer"}, {"uid": "github/tensorly/viz", "html_url": "https://rseng.github.io/software/repository/github/tensorly/viz", "api_url": "https://rseng.github.io/software/api/repos/github/tensorly/viz"}, {"uid": "github/actris-cloudnet/mwrpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/mwrpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/mwrpy"}, {"uid": "github/actris-cloudnet/cloudnetpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/cloudnetpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/cloudnetpy"}, {"uid": "github/hanyue36/nanoplexer", "html_url": "https://rseng.github.io/software/repository/github/hanyue36/nanoplexer", "api_url": "https://rseng.github.io/software/api/repos/github/hanyue36/nanoplexer"}, {"uid": "github/FaaSr/FaaSr-package", "html_url": "https://rseng.github.io/software/repository/github/FaaSr/FaaSr-package", "api_url": "https://rseng.github.io/software/api/repos/github/FaaSr/FaaSr-package"}, {"uid": "github/ThibaultFillion/strengths", "html_url": "https://rseng.github.io/software/repository/github/ThibaultFillion/strengths", "api_url": "https://rseng.github.io/software/api/repos/github/ThibaultFillion/strengths"}, {"uid": "github/r-spatial/rgee", "html_url": "https://rseng.github.io/software/repository/github/r-spatial/rgee", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatial/rgee"}, {"uid": "github/beebdev/HARU", "html_url": "https://rseng.github.io/software/repository/github/beebdev/HARU", "api_url": "https://rseng.github.io/software/api/repos/github/beebdev/HARU"}, {"uid": "github/plotly/dash", "html_url": "https://rseng.github.io/software/repository/github/plotly/dash", "api_url": "https://rseng.github.io/software/api/repos/github/plotly/dash"}, {"uid": "github/danielhuson/jloda", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/jloda", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/jloda"}, {"uid": "github/danielhuson/malt", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/malt", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/malt"}, {"uid": "github/danielhuson/dendroscope3", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/dendroscope3", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/dendroscope3"}, {"uid": "github/danielhuson/megan-ce", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/megan-ce", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/megan-ce"}, {"uid": "github/GalacticDynamics-Oxford/Agama", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics-Oxford/Agama", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics-Oxford/Agama"}, {"uid": "github/0xCoto/Virgo", "html_url": "https://rseng.github.io/software/repository/github/0xCoto/Virgo", "api_url": "https://rseng.github.io/software/api/repos/github/0xCoto/Virgo"}, {"uid": "github/annajenul/UBayFS", "html_url": "https://rseng.github.io/software/repository/github/annajenul/UBayFS", "api_url": "https://rseng.github.io/software/api/repos/github/annajenul/UBayFS"}, {"uid": "github/benedictpaten/marginPhase", "html_url": "https://rseng.github.io/software/repository/github/benedictpaten/marginPhase", "api_url": "https://rseng.github.io/software/api/repos/github/benedictpaten/marginPhase"}, {"uid": "github/SysBioUAB/hpi_predictor", "html_url": "https://rseng.github.io/software/repository/github/SysBioUAB/hpi_predictor", "api_url": "https://rseng.github.io/software/api/repos/github/SysBioUAB/hpi_predictor"}, {"uid": "github/Basvanstein/GSAreport", "html_url": "https://rseng.github.io/software/repository/github/Basvanstein/GSAreport", "api_url": "https://rseng.github.io/software/api/repos/github/Basvanstein/GSAreport"}, {"uid": "github/yuguangchen1/KcwiKit", "html_url": "https://rseng.github.io/software/repository/github/yuguangchen1/KcwiKit", "api_url": "https://rseng.github.io/software/api/repos/github/yuguangchen1/KcwiKit"}, {"uid": "github/cschreib/egg", "html_url": "https://rseng.github.io/software/repository/github/cschreib/egg", "api_url": "https://rseng.github.io/software/api/repos/github/cschreib/egg"}, {"uid": "github/ofionnad/radiowinds", "html_url": "https://rseng.github.io/software/repository/github/ofionnad/radiowinds", "api_url": "https://rseng.github.io/software/api/repos/github/ofionnad/radiowinds"}, {"uid": "github/phpuech/OT_Analysis", "html_url": "https://rseng.github.io/software/repository/github/phpuech/OT_Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phpuech/OT_Analysis"}, {"uid": "github/maize-genetics/rTASSEL", "html_url": "https://rseng.github.io/software/repository/github/maize-genetics/rTASSEL", "api_url": "https://rseng.github.io/software/api/repos/github/maize-genetics/rTASSEL"}, {"uid": "github/andr1976/HydDown", "html_url": "https://rseng.github.io/software/repository/github/andr1976/HydDown", "api_url": "https://rseng.github.io/software/api/repos/github/andr1976/HydDown"}, {"uid": "github/Valar-hub/MMLPhoto-z", "html_url": "https://rseng.github.io/software/repository/github/Valar-hub/MMLPhoto-z", "api_url": "https://rseng.github.io/software/api/repos/github/Valar-hub/MMLPhoto-z"}, {"uid": "github/lucianolorenti/ceruleo", "html_url": "https://rseng.github.io/software/repository/github/lucianolorenti/ceruleo", "api_url": "https://rseng.github.io/software/api/repos/github/lucianolorenti/ceruleo"}, {"uid": "github/YihanWangAstro/SpaceHub", "html_url": "https://rseng.github.io/software/repository/github/YihanWangAstro/SpaceHub", "api_url": "https://rseng.github.io/software/api/repos/github/YihanWangAstro/SpaceHub"}, {"uid": "github/winger/hawking_net", "html_url": "https://rseng.github.io/software/repository/github/winger/hawking_net", "api_url": "https://rseng.github.io/software/api/repos/github/winger/hawking_net"}, {"uid": "github/mnets/pymnet", "html_url": "https://rseng.github.io/software/repository/github/mnets/pymnet", "api_url": "https://rseng.github.io/software/api/repos/github/mnets/pymnet"}, {"uid": "github/jpober/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/jpober/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/jpober/21cmSense"}, {"uid": "github/rpoleski/MulensModel", "html_url": "https://rseng.github.io/software/repository/github/rpoleski/MulensModel", "api_url": "https://rseng.github.io/software/api/repos/github/rpoleski/MulensModel"}, {"uid": "github/PSims/BayesEoR", "html_url": "https://rseng.github.io/software/repository/github/PSims/BayesEoR", "api_url": "https://rseng.github.io/software/api/repos/github/PSims/BayesEoR"}, {"uid": "github/JuliaOcean/AIBECS.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/AIBECS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/AIBECS.jl"}, {"uid": "github/JuliaOcean/PlanktonIndividuals.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/PlanktonIndividuals.jl"}, {"uid": "github/marseille-proteomique/DIAgui", "html_url": "https://rseng.github.io/software/repository/github/marseille-proteomique/DIAgui", "api_url": "https://rseng.github.io/software/api/repos/github/marseille-proteomique/DIAgui"}, {"uid": "github/whybsml/whybsml", "html_url": "https://rseng.github.io/software/repository/github/whybsml/whybsml", "api_url": "https://rseng.github.io/software/api/repos/github/whybsml/whybsml"}, {"uid": "github/JuliaHCI/ADI.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHCI/ADI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHCI/ADI.jl"}, {"uid": "github/NuSpaceSim/nupyprop", "html_url": "https://rseng.github.io/software/repository/github/NuSpaceSim/nupyprop", "api_url": "https://rseng.github.io/software/api/repos/github/NuSpaceSim/nupyprop"}, {"uid": "github/athob/py-ananke", "html_url": "https://rseng.github.io/software/repository/github/athob/py-ananke", "api_url": "https://rseng.github.io/software/api/repos/github/athob/py-ananke"}, {"uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum"}, {"uid": "github/m-a-d-n-e-s-s/madness", "html_url": "https://rseng.github.io/software/repository/github/m-a-d-n-e-s-s/madness", "api_url": "https://rseng.github.io/software/api/repos/github/m-a-d-n-e-s-s/madness"}, {"uid": "github/MaayanLab/signature-commons-ui", "html_url": "https://rseng.github.io/software/repository/github/MaayanLab/signature-commons-ui", "api_url": "https://rseng.github.io/software/api/repos/github/MaayanLab/signature-commons-ui"}, {"uid": "github/PyPO-dev/PyPO", "html_url": "https://rseng.github.io/software/repository/github/PyPO-dev/PyPO", "api_url": "https://rseng.github.io/software/api/repos/github/PyPO-dev/PyPO"}, {"uid": "github/Jesper-Karsten/MBASC", "html_url": "https://rseng.github.io/software/repository/github/Jesper-Karsten/MBASC", "api_url": "https://rseng.github.io/software/api/repos/github/Jesper-Karsten/MBASC"}, {"uid": "github/UM-PEPL/HallThruster.jl", "html_url": "https://rseng.github.io/software/repository/github/UM-PEPL/HallThruster.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UM-PEPL/HallThruster.jl"}, {"uid": "github/MRChemSoft/mrchem", "html_url": "https://rseng.github.io/software/repository/github/MRChemSoft/mrchem", "api_url": "https://rseng.github.io/software/api/repos/github/MRChemSoft/mrchem"}, {"uid": "github/pandas-dev/pandas", "html_url": "https://rseng.github.io/software/repository/github/pandas-dev/pandas", "api_url": "https://rseng.github.io/software/api/repos/github/pandas-dev/pandas"}, {"uid": "github/BenNordick/HiLoop", "html_url": "https://rseng.github.io/software/repository/github/BenNordick/HiLoop", "api_url": "https://rseng.github.io/software/api/repos/github/BenNordick/HiLoop"}, {"uid": "github/assume-framework/assume", "html_url": "https://rseng.github.io/software/repository/github/assume-framework/assume", "api_url": "https://rseng.github.io/software/api/repos/github/assume-framework/assume"}, {"uid": "github/pirl-unc/ace", "html_url": "https://rseng.github.io/software/repository/github/pirl-unc/ace", "api_url": "https://rseng.github.io/software/api/repos/github/pirl-unc/ace"}, {"uid": "github/soerendip/ms-mint", "html_url": "https://rseng.github.io/software/repository/github/soerendip/ms-mint", "api_url": "https://rseng.github.io/software/api/repos/github/soerendip/ms-mint"}, {"uid": "github/meta-logic/sequoia", "html_url": "https://rseng.github.io/software/repository/github/meta-logic/sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/meta-logic/sequoia"}, {"uid": "github/chemprop/chemprop_benchmark", "html_url": "https://rseng.github.io/software/repository/github/chemprop/chemprop_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/chemprop/chemprop_benchmark"}, {"uid": "github/chrisfinlay/tabascal", "html_url": "https://rseng.github.io/software/repository/github/chrisfinlay/tabascal", "api_url": "https://rseng.github.io/software/api/repos/github/chrisfinlay/tabascal"}, {"uid": "github/esoPanda/FTbg", "html_url": "https://rseng.github.io/software/repository/github/esoPanda/FTbg", "api_url": "https://rseng.github.io/software/api/repos/github/esoPanda/FTbg"}, {"uid": "github/champsproject/ldds", "html_url": "https://rseng.github.io/software/repository/github/champsproject/ldds", "api_url": "https://rseng.github.io/software/api/repos/github/champsproject/ldds"}, {"uid": "github/varchasgopalaswamy/AutoUncertainties", "html_url": "https://rseng.github.io/software/repository/github/varchasgopalaswamy/AutoUncertainties", "api_url": "https://rseng.github.io/software/api/repos/github/varchasgopalaswamy/AutoUncertainties"}, {"uid": "github/rice-solar-physics/HYDRAD", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/HYDRAD", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/HYDRAD"}, {"uid": "github/rice-solar-physics/EBTEL", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/EBTEL", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/EBTEL"}, {"uid": "github/samtools/bcftools", "html_url": "https://rseng.github.io/software/repository/github/samtools/bcftools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/bcftools"}, {"uid": "github/samtools/htslib", "html_url": "https://rseng.github.io/software/repository/github/samtools/htslib", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htslib"}, {"uid": "github/samtools/samtools", "html_url": "https://rseng.github.io/software/repository/github/samtools/samtools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/samtools"}, {"uid": "github/samtools/htsjdk", "html_url": "https://rseng.github.io/software/repository/github/samtools/htsjdk", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htsjdk"}, {"uid": "github/lahovniktadej/gatree", "html_url": "https://rseng.github.io/software/repository/github/lahovniktadej/gatree", "api_url": "https://rseng.github.io/software/api/repos/github/lahovniktadej/gatree"}, {"uid": "github/timahutchinson/redmonster", "html_url": "https://rseng.github.io/software/repository/github/timahutchinson/redmonster", "api_url": "https://rseng.github.io/software/api/repos/github/timahutchinson/redmonster"}, {"uid": "github/mifumagalli/cluster-cloc", "html_url": "https://rseng.github.io/software/repository/github/mifumagalli/cluster-cloc", "api_url": "https://rseng.github.io/software/api/repos/github/mifumagalli/cluster-cloc"}, {"uid": "github/OSSOS/SurveySimulator", "html_url": "https://rseng.github.io/software/repository/github/OSSOS/SurveySimulator", "api_url": "https://rseng.github.io/software/api/repos/github/OSSOS/SurveySimulator"}, {"uid": "github/benopp99/DPMhalo", "html_url": "https://rseng.github.io/software/repository/github/benopp99/DPMhalo", "api_url": "https://rseng.github.io/software/api/repos/github/benopp99/DPMhalo"}, {"uid": "github/beckermr/calclens", "html_url": "https://rseng.github.io/software/repository/github/beckermr/calclens", "api_url": "https://rseng.github.io/software/api/repos/github/beckermr/calclens"}, {"uid": "github/varlociraptor/varlociraptorhub.io", "html_url": "https://rseng.github.io/software/repository/github/varlociraptor/varlociraptorhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/varlociraptor/varlociraptorhub.io"}, {"uid": "github/jamescasbon/PyVCF", "html_url": "https://rseng.github.io/software/repository/github/jamescasbon/PyVCF", "api_url": "https://rseng.github.io/software/api/repos/github/jamescasbon/PyVCF"}, {"uid": "github/zoometh/iconr", "html_url": "https://rseng.github.io/software/repository/github/zoometh/iconr", "api_url": "https://rseng.github.io/software/api/repos/github/zoometh/iconr"}, {"uid": "github/PFPE/shipgrav", "html_url": "https://rseng.github.io/software/repository/github/PFPE/shipgrav", "api_url": "https://rseng.github.io/software/api/repos/github/PFPE/shipgrav"}, {"uid": "github/iain-mcdonald/PySSED", "html_url": "https://rseng.github.io/software/repository/github/iain-mcdonald/PySSED", "api_url": "https://rseng.github.io/software/api/repos/github/iain-mcdonald/PySSED"}, {"uid": "github/PyFstat/PyFstat", "html_url": "https://rseng.github.io/software/repository/github/PyFstat/PyFstat", "api_url": "https://rseng.github.io/software/api/repos/github/PyFstat/PyFstat"}, {"uid": "github/alchemistry/alchemlyb", "html_url": "https://rseng.github.io/software/repository/github/alchemistry/alchemlyb", "api_url": "https://rseng.github.io/software/api/repos/github/alchemistry/alchemlyb"}, {"uid": "github/cupy/cupy", "html_url": "https://rseng.github.io/software/repository/github/cupy/cupy", "api_url": "https://rseng.github.io/software/api/repos/github/cupy/cupy"}, {"uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "html_url": "https://rseng.github.io/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "api_url": "https://rseng.github.io/software/api/repos/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY"}, {"uid": "github/enthought/vpsearch", "html_url": "https://rseng.github.io/software/repository/github/enthought/vpsearch", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/vpsearch"}, {"uid": "github/enthought/mayavi", "html_url": "https://rseng.github.io/software/repository/github/enthought/mayavi", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/mayavi"}, {"uid": "github/hildebra/sdm", "html_url": "https://rseng.github.io/software/repository/github/hildebra/sdm", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/sdm"}, {"uid": "github/hildebra/LCA", "html_url": "https://rseng.github.io/software/repository/github/hildebra/LCA", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/LCA"}, {"uid": "github/paranoya/population-synthesis-toolkit", "html_url": "https://rseng.github.io/software/repository/github/paranoya/population-synthesis-toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/paranoya/population-synthesis-toolkit"}, {"uid": "github/cdw9bf/CompactGroup", "html_url": "https://rseng.github.io/software/repository/github/cdw9bf/CompactGroup", "api_url": "https://rseng.github.io/software/api/repos/github/cdw9bf/CompactGroup"}, {"uid": "github/sinc-lab/miRe2e", "html_url": "https://rseng.github.io/software/repository/github/sinc-lab/miRe2e", "api_url": "https://rseng.github.io/software/api/repos/github/sinc-lab/miRe2e"}, {"uid": "github/Pinlyu3/LRLoop", "html_url": "https://rseng.github.io/software/repository/github/Pinlyu3/LRLoop", "api_url": "https://rseng.github.io/software/api/repos/github/Pinlyu3/LRLoop"}, {"uid": "github/tsipkens/atems", "html_url": "https://rseng.github.io/software/repository/github/tsipkens/atems", "api_url": "https://rseng.github.io/software/api/repos/github/tsipkens/atems"}, {"uid": "github/quatrope/feets", "html_url": "https://rseng.github.io/software/repository/github/quatrope/feets", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/feets"}, {"uid": "github/quatrope/ProperImage", "html_url": "https://rseng.github.io/software/repository/github/quatrope/ProperImage", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/ProperImage"}, {"uid": "github/FluidityProject/fluidity", "html_url": "https://rseng.github.io/software/repository/github/FluidityProject/fluidity", "api_url": "https://rseng.github.io/software/api/repos/github/FluidityProject/fluidity"}, {"uid": "github/marco-oliva/pfp", "html_url": "https://rseng.github.io/software/repository/github/marco-oliva/pfp", "api_url": "https://rseng.github.io/software/api/repos/github/marco-oliva/pfp"}, {"uid": "github/martibosch/detectree", "html_url": "https://rseng.github.io/software/repository/github/martibosch/detectree", "api_url": "https://rseng.github.io/software/api/repos/github/martibosch/detectree"}, {"uid": "github/simon-smart88/shinyscholar", "html_url": "https://rseng.github.io/software/repository/github/simon-smart88/shinyscholar", "api_url": "https://rseng.github.io/software/api/repos/github/simon-smart88/shinyscholar"}, {"uid": "github/jacobmerson/model-traits", "html_url": "https://rseng.github.io/software/repository/github/jacobmerson/model-traits", "api_url": "https://rseng.github.io/software/api/repos/github/jacobmerson/model-traits"}, {"uid": "github/slcs-jsc/mptrac", "html_url": "https://rseng.github.io/software/repository/github/slcs-jsc/mptrac", "api_url": "https://rseng.github.io/software/api/repos/github/slcs-jsc/mptrac"}, {"uid": "github/AgentOxygen/HDP", "html_url": "https://rseng.github.io/software/repository/github/AgentOxygen/HDP", "api_url": "https://rseng.github.io/software/api/repos/github/AgentOxygen/HDP"}, {"uid": "github/taxprofiler/taxpasta", "html_url": "https://rseng.github.io/software/repository/github/taxprofiler/taxpasta", "api_url": "https://rseng.github.io/software/api/repos/github/taxprofiler/taxpasta"}, {"uid": "github/splicebox/PsiCLASS", "html_url": "https://rseng.github.io/software/repository/github/splicebox/PsiCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/splicebox/PsiCLASS"}, {"uid": "github/tensorflow/tensorflow", "html_url": "https://rseng.github.io/software/repository/github/tensorflow/tensorflow", "api_url": "https://rseng.github.io/software/api/repos/github/tensorflow/tensorflow"}, {"uid": "github/mianbreton/pysco", "html_url": "https://rseng.github.io/software/repository/github/mianbreton/pysco", "api_url": "https://rseng.github.io/software/api/repos/github/mianbreton/pysco"}, {"uid": "github/CarlosCoba/XookSuut-code", "html_url": "https://rseng.github.io/software/repository/github/CarlosCoba/XookSuut-code", "api_url": "https://rseng.github.io/software/api/repos/github/CarlosCoba/XookSuut-code"}, {"uid": "github/BGPS/distance-omnibus", "html_url": "https://rseng.github.io/software/repository/github/BGPS/distance-omnibus", "api_url": "https://rseng.github.io/software/api/repos/github/BGPS/distance-omnibus"}, {"uid": "github/biolab/orange-bio", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange-bio"}, {"uid": "github/biolab/orange3-network", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3-network", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3-network"}, {"uid": "github/biolab/orange3", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3"}, {"uid": "github/drcandacemakedamoore/cleanX", "html_url": "https://rseng.github.io/software/repository/github/drcandacemakedamoore/cleanX", "api_url": "https://rseng.github.io/software/api/repos/github/drcandacemakedamoore/cleanX"}, {"uid": "github/yuefan98/nleis.py", "html_url": "https://rseng.github.io/software/repository/github/yuefan98/nleis.py", "api_url": "https://rseng.github.io/software/api/repos/github/yuefan98/nleis.py"}, {"uid": "github/Orin-beep/PlasGO", "html_url": "https://rseng.github.io/software/repository/github/Orin-beep/PlasGO", "api_url": "https://rseng.github.io/software/api/repos/github/Orin-beep/PlasGO"}, {"uid": "github/abeelen/powspec", "html_url": "https://rseng.github.io/software/repository/github/abeelen/powspec", "api_url": "https://rseng.github.io/software/api/repos/github/abeelen/powspec"}, {"uid": "github/UUDigitalHumanitieslab/texcavator", "html_url": "https://rseng.github.io/software/repository/github/UUDigitalHumanitieslab/texcavator", "api_url": "https://rseng.github.io/software/api/repos/github/UUDigitalHumanitieslab/texcavator"}, {"uid": "github/sylvainprigent/napari-tracks-reader", "html_url": "https://rseng.github.io/software/repository/github/sylvainprigent/napari-tracks-reader", "api_url": "https://rseng.github.io/software/api/repos/github/sylvainprigent/napari-tracks-reader"}, {"uid": "github/jonaspleyer/cellular_raza", "html_url": "https://rseng.github.io/software/repository/github/jonaspleyer/cellular_raza", "api_url": "https://rseng.github.io/software/api/repos/github/jonaspleyer/cellular_raza"}, {"uid": "github/GalagaBits/JWST-FGS-Spelunker", "html_url": "https://rseng.github.io/software/repository/github/GalagaBits/JWST-FGS-Spelunker", "api_url": "https://rseng.github.io/software/api/repos/github/GalagaBits/JWST-FGS-Spelunker"}, {"uid": "github/cistib/origami", "html_url": "https://rseng.github.io/software/repository/github/cistib/origami", "api_url": "https://rseng.github.io/software/api/repos/github/cistib/origami"}, {"uid": "github/Tarskin/LaCyTools", "html_url": "https://rseng.github.io/software/repository/github/Tarskin/LaCyTools", "api_url": "https://rseng.github.io/software/api/repos/github/Tarskin/LaCyTools"}, {"uid": "github/OSUDSL/pydre", "html_url": "https://rseng.github.io/software/repository/github/OSUDSL/pydre", "api_url": "https://rseng.github.io/software/api/repos/github/OSUDSL/pydre"}, {"uid": "github/MDamiano/ExoTR", "html_url": "https://rseng.github.io/software/repository/github/MDamiano/ExoTR", "api_url": "https://rseng.github.io/software/api/repos/github/MDamiano/ExoTR"}, {"uid": "github/DorianDepriester/mtex2Gmsh", "html_url": "https://rseng.github.io/software/repository/github/DorianDepriester/mtex2Gmsh", "api_url": "https://rseng.github.io/software/api/repos/github/DorianDepriester/mtex2Gmsh"}, {"uid": "github/mlipatov/paint_atmospheres", "html_url": "https://rseng.github.io/software/repository/github/mlipatov/paint_atmospheres", "api_url": "https://rseng.github.io/software/api/repos/github/mlipatov/paint_atmospheres"}, {"uid": "github/harrispopgen/mutyper", "html_url": "https://rseng.github.io/software/repository/github/harrispopgen/mutyper", "api_url": "https://rseng.github.io/software/api/repos/github/harrispopgen/mutyper"}, {"uid": "github/hyattpd/Prodigal", "html_url": "https://rseng.github.io/software/repository/github/hyattpd/Prodigal", "api_url": "https://rseng.github.io/software/api/repos/github/hyattpd/Prodigal"}, {"uid": "github/Kkritos/Rapster", "html_url": "https://rseng.github.io/software/repository/github/Kkritos/Rapster", "api_url": "https://rseng.github.io/software/api/repos/github/Kkritos/Rapster"}, {"uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPOMDP/CompressedBeliefMDPs.jl"}, {"uid": "github/lehtiolab/msstitch", "html_url": "https://rseng.github.io/software/repository/github/lehtiolab/msstitch", "api_url": "https://rseng.github.io/software/api/repos/github/lehtiolab/msstitch"}, {"uid": "github/tariks/peakachu", "html_url": "https://rseng.github.io/software/repository/github/tariks/peakachu", "api_url": "https://rseng.github.io/software/api/repos/github/tariks/peakachu"}, {"uid": "github/awmann/M_-M_K-", "html_url": "https://rseng.github.io/software/repository/github/awmann/M_-M_K-", "api_url": "https://rseng.github.io/software/api/repos/github/awmann/M_-M_K-"}, {"uid": "github/eldariont/svim", "html_url": "https://rseng.github.io/software/repository/github/eldariont/svim", "api_url": "https://rseng.github.io/software/api/repos/github/eldariont/svim"}, {"uid": "github/rajmadan96/StochasticDominance.jl", "html_url": "https://rseng.github.io/software/repository/github/rajmadan96/StochasticDominance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rajmadan96/StochasticDominance.jl"}, {"uid": "github/RAMP-project/RAMP", "html_url": "https://rseng.github.io/software/repository/github/RAMP-project/RAMP", "api_url": "https://rseng.github.io/software/api/repos/github/RAMP-project/RAMP"}, {"uid": "github/LSSTDESC/CCL", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/CCL", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/CCL"}, {"uid": "github/LSSTDESC/Spectractor", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/Spectractor", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/Spectractor"}, {"uid": "github/LSSTDESC/BlendingToolKit", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/BlendingToolKit", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/BlendingToolKit"}, {"uid": "github/LSSTDESC/sacc", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/sacc", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/sacc"}, {"uid": "github/LSSTDESC/chroma", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/chroma", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/chroma"}, {"uid": "github/LSSTDESC/descqa", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/descqa", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/descqa"}, {"uid": "github/LSSTDESC/WeakLensingDeblending", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/WeakLensingDeblending", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/WeakLensingDeblending"}, {"uid": "github/LSSTDESC/snmachine", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/snmachine", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/snmachine"}, {"uid": "github/LSSTDESC/NaMaster", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/NaMaster", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/NaMaster"}, {"uid": "github/scottgigante/picopore", "html_url": "https://rseng.github.io/software/repository/github/scottgigante/picopore", "api_url": "https://rseng.github.io/software/api/repos/github/scottgigante/picopore"}, {"uid": "github/hmtabernero/SteParSyn", "html_url": "https://rseng.github.io/software/repository/github/hmtabernero/SteParSyn", "api_url": "https://rseng.github.io/software/api/repos/github/hmtabernero/SteParSyn"}, {"uid": "github/ekg/seqwish", "html_url": "https://rseng.github.io/software/repository/github/ekg/seqwish", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/seqwish"}, {"uid": "github/ekg/fastahack", "html_url": "https://rseng.github.io/software/repository/github/ekg/fastahack", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/fastahack"}, {"uid": "github/ekg/tabixpp", "html_url": "https://rseng.github.io/software/repository/github/ekg/tabixpp", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/tabixpp"}, {"uid": "github/ekg/freebayes", "html_url": "https://rseng.github.io/software/repository/github/ekg/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/freebayes"}, {"uid": "github/ekg/smithwaterman", "html_url": "https://rseng.github.io/software/repository/github/ekg/smithwaterman", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/smithwaterman"}, {"uid": "github/rchartra/NcCut", "html_url": "https://rseng.github.io/software/repository/github/rchartra/NcCut", "api_url": "https://rseng.github.io/software/api/repos/github/rchartra/NcCut"}, {"uid": "github/ymaan4/rficlean", "html_url": "https://rseng.github.io/software/repository/github/ymaan4/rficlean", "api_url": "https://rseng.github.io/software/api/repos/github/ymaan4/rficlean"}, {"uid": "github/FraunhoferIWES/foxes", "html_url": "https://rseng.github.io/software/repository/github/FraunhoferIWES/foxes", "api_url": "https://rseng.github.io/software/api/repos/github/FraunhoferIWES/foxes"}, {"uid": "github/jasonyangshadow/lpmx", "html_url": "https://rseng.github.io/software/repository/github/jasonyangshadow/lpmx", "api_url": "https://rseng.github.io/software/api/repos/github/jasonyangshadow/lpmx"}, {"uid": "github/DLR-AMR/t8code", "html_url": "https://rseng.github.io/software/repository/github/DLR-AMR/t8code", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-AMR/t8code"}, {"uid": "github/seamplex/feenox", "html_url": "https://rseng.github.io/software/repository/github/seamplex/feenox", "api_url": "https://rseng.github.io/software/api/repos/github/seamplex/feenox"}, {"uid": "github/kreshuklab/plant-seg", "html_url": "https://rseng.github.io/software/repository/github/kreshuklab/plant-seg", "api_url": "https://rseng.github.io/software/api/repos/github/kreshuklab/plant-seg"}, {"uid": "github/Yomguithereal/talisman", "html_url": "https://rseng.github.io/software/repository/github/Yomguithereal/talisman", "api_url": "https://rseng.github.io/software/api/repos/github/Yomguithereal/talisman"}, {"uid": "github/Pizzuti92/MG-MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/github/Pizzuti92/MG-MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/github/Pizzuti92/MG-MAMPOSSt"}, {"uid": "github/AngusWright/LAMBDAR", "html_url": "https://rseng.github.io/software/repository/github/AngusWright/LAMBDAR", "api_url": "https://rseng.github.io/software/api/repos/github/AngusWright/LAMBDAR"}, {"uid": "github/Pas-Kapli/mptp", "html_url": "https://rseng.github.io/software/repository/github/Pas-Kapli/mptp", "api_url": "https://rseng.github.io/software/api/repos/github/Pas-Kapli/mptp"}, {"uid": "github/ntlucia/BrownDwarf-SpectralIndices", "html_url": "https://rseng.github.io/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", "api_url": "https://rseng.github.io/software/api/repos/github/ntlucia/BrownDwarf-SpectralIndices"}, {"uid": "github/astrosupriyo/pyTANSPEC", "html_url": "https://rseng.github.io/software/repository/github/astrosupriyo/pyTANSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/astrosupriyo/pyTANSPEC"}, {"uid": "github/tvh0021/aweSOM", "html_url": "https://rseng.github.io/software/repository/github/tvh0021/aweSOM", "api_url": "https://rseng.github.io/software/api/repos/github/tvh0021/aweSOM"}, {"uid": "github/simonprovost/scikit-longitudinal", "html_url": "https://rseng.github.io/software/repository/github/simonprovost/scikit-longitudinal", "api_url": "https://rseng.github.io/software/api/repos/github/simonprovost/scikit-longitudinal"}, {"uid": "github/OrlandoLam/SAMT", "html_url": "https://rseng.github.io/software/repository/github/OrlandoLam/SAMT", "api_url": "https://rseng.github.io/software/api/repos/github/OrlandoLam/SAMT"}, {"uid": "github/Quantum-Dynamics-Hub/libra-code", "html_url": "https://rseng.github.io/software/repository/github/Quantum-Dynamics-Hub/libra-code", "api_url": "https://rseng.github.io/software/api/repos/github/Quantum-Dynamics-Hub/libra-code"}, {"uid": "github/cthoyt/bel-resources", "html_url": "https://rseng.github.io/software/repository/github/cthoyt/bel-resources", "api_url": "https://rseng.github.io/software/api/repos/github/cthoyt/bel-resources"}, {"uid": "github/arshajii/ema", "html_url": "https://rseng.github.io/software/repository/github/arshajii/ema", "api_url": "https://rseng.github.io/software/api/repos/github/arshajii/ema"}, {"uid": "github/privong/pyMCspearman", "html_url": "https://rseng.github.io/software/repository/github/privong/pyMCspearman", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pyMCspearman"}, {"uid": "github/privong/pymccorrelation", "html_url": "https://rseng.github.io/software/repository/github/privong/pymccorrelation", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pymccorrelation"}, {"uid": "github/ratt-ru/Stimela-classic", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela-classic", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela-classic"}, {"uid": "github/ratt-ru/eidos", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/eidos", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/eidos"}, {"uid": "github/ratt-ru/Stimela", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela"}, {"uid": "github/ratt-ru/QuartiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/QuartiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/QuartiCal"}, {"uid": "github/ratt-ru/solarkat", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/solarkat", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/solarkat"}, {"uid": "github/ratt-ru/montblanc", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/montblanc", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/montblanc"}, {"uid": "github/ratt-ru/dask-ms", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/dask-ms", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/dask-ms"}, {"uid": "github/ratt-ru/breizorro", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/breizorro", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/breizorro"}, {"uid": "github/ratt-ru/codex-africanus", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/codex-africanus", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/codex-africanus"}, {"uid": "github/ratt-ru/CubiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/CubiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/CubiCal"}, {"uid": "github/ratt-ru/rodrigues", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/rodrigues", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/rodrigues"}, {"uid": "github/ratt-ru/PyMORESANE", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/PyMORESANE", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/PyMORESANE"}, {"uid": "github/ratt-ru/smops", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/smops", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/smops"}, {"uid": "github/10XGenomics/bamtofastq", "html_url": "https://rseng.github.io/software/repository/github/10XGenomics/bamtofastq", "api_url": "https://rseng.github.io/software/api/repos/github/10XGenomics/bamtofastq"}, {"uid": "github/Exo-MerCat/Exo-MerCat", "html_url": "https://rseng.github.io/software/repository/github/Exo-MerCat/Exo-MerCat", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-MerCat/Exo-MerCat"}, {"uid": "github/traja-team/traja", "html_url": "https://rseng.github.io/software/repository/github/traja-team/traja", "api_url": "https://rseng.github.io/software/api/repos/github/traja-team/traja"}, {"uid": "github/glenco/lensed", "html_url": "https://rseng.github.io/software/repository/github/glenco/lensed", "api_url": "https://rseng.github.io/software/api/repos/github/glenco/lensed"}, {"uid": "github/pwry/lextes", "html_url": "https://rseng.github.io/software/repository/github/pwry/lextes", "api_url": "https://rseng.github.io/software/api/repos/github/pwry/lextes"}, {"uid": "github/CityU-AIM-Group/HTD", "html_url": "https://rseng.github.io/software/repository/github/CityU-AIM-Group/HTD", "api_url": "https://rseng.github.io/software/api/repos/github/CityU-AIM-Group/HTD"}, {"uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", "html_url": "https://rseng.github.io/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", "api_url": "https://rseng.github.io/software/api/repos/github/Wenxin-Wan/ephor_wp4_method_tutorial"}, {"uid": "github/neslusan/BELTCROSS2", "html_url": "https://rseng.github.io/software/repository/github/neslusan/BELTCROSS2", "api_url": "https://rseng.github.io/software/api/repos/github/neslusan/BELTCROSS2"}, {"uid": "github/Martinsos/edlib", "html_url": "https://rseng.github.io/software/repository/github/Martinsos/edlib", "api_url": "https://rseng.github.io/software/api/repos/github/Martinsos/edlib"}, {"uid": "github/UAMCAntwerpen/LEADD", "html_url": "https://rseng.github.io/software/repository/github/UAMCAntwerpen/LEADD", "api_url": "https://rseng.github.io/software/api/repos/github/UAMCAntwerpen/LEADD"}, {"uid": "github/kimberg/voxbo", "html_url": "https://rseng.github.io/software/repository/github/kimberg/voxbo", "api_url": "https://rseng.github.io/software/api/repos/github/kimberg/voxbo"}, {"uid": "github/szhorvat/IGraphM", "html_url": "https://rseng.github.io/software/repository/github/szhorvat/IGraphM", "api_url": "https://rseng.github.io/software/api/repos/github/szhorvat/IGraphM"}, {"uid": "github/IDEMSInternational/ExcelToShiny", "html_url": "https://rseng.github.io/software/repository/github/IDEMSInternational/ExcelToShiny", "api_url": "https://rseng.github.io/software/api/repos/github/IDEMSInternational/ExcelToShiny"}, {"uid": "github/xmuyulab/DreamDIA-XMBD", "html_url": "https://rseng.github.io/software/repository/github/xmuyulab/DreamDIA-XMBD", "api_url": "https://rseng.github.io/software/api/repos/github/xmuyulab/DreamDIA-XMBD"}, {"uid": "github/maxbernyk/lightcone", "html_url": "https://rseng.github.io/software/repository/github/maxbernyk/lightcone", "api_url": "https://rseng.github.io/software/api/repos/github/maxbernyk/lightcone"}, {"uid": "github/vaexio/vaex", "html_url": "https://rseng.github.io/software/repository/github/vaexio/vaex", "api_url": "https://rseng.github.io/software/api/repos/github/vaexio/vaex"}, {"uid": "github/ericagol/TTVFaster", "html_url": "https://rseng.github.io/software/repository/github/ericagol/TTVFaster", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/TTVFaster"}, {"uid": "github/ericagol/NbodyGradient.jl", "html_url": "https://rseng.github.io/software/repository/github/ericagol/NbodyGradient.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/NbodyGradient.jl"}, {"uid": "github/r-lib/gert", "html_url": "https://rseng.github.io/software/repository/github/r-lib/gert", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/gert"}, {"uid": "github/r-lib/credentials", "html_url": "https://rseng.github.io/software/repository/github/r-lib/credentials", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/credentials"}, {"uid": "github/r-lib/lintr", "html_url": "https://rseng.github.io/software/repository/github/r-lib/lintr", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/lintr"}, {"uid": "github/achaikova/frbmclust", "html_url": "https://rseng.github.io/software/repository/github/achaikova/frbmclust", "api_url": "https://rseng.github.io/software/api/repos/github/achaikova/frbmclust"}, {"uid": "github/Mat-dp/mat-dp-core", "html_url": "https://rseng.github.io/software/repository/github/Mat-dp/mat-dp-core", "api_url": "https://rseng.github.io/software/api/repos/github/Mat-dp/mat-dp-core"}, {"uid": "github/anugrahjo/PySLSQP", "html_url": "https://rseng.github.io/software/repository/github/anugrahjo/PySLSQP", "api_url": "https://rseng.github.io/software/api/repos/github/anugrahjo/PySLSQP"}, {"uid": "github/underworldcode/underworld3", "html_url": "https://rseng.github.io/software/repository/github/underworldcode/underworld3", "api_url": "https://rseng.github.io/software/api/repos/github/underworldcode/underworld3"}, {"uid": "github/healytwin1/HISS", "html_url": "https://rseng.github.io/software/repository/github/healytwin1/HISS", "api_url": "https://rseng.github.io/software/api/repos/github/healytwin1/HISS"}, {"uid": "github/stevengiacalone/triceratops", "html_url": "https://rseng.github.io/software/repository/github/stevengiacalone/triceratops", "api_url": "https://rseng.github.io/software/api/repos/github/stevengiacalone/triceratops"}, {"uid": "github/matvii/ADAM", "html_url": "https://rseng.github.io/software/repository/github/matvii/ADAM", "api_url": "https://rseng.github.io/software/api/repos/github/matvii/ADAM"}, {"uid": "github/aL3x-O-o-Hung/CAT-Net", "html_url": "https://rseng.github.io/software/repository/github/aL3x-O-o-Hung/CAT-Net", "api_url": "https://rseng.github.io/software/api/repos/github/aL3x-O-o-Hung/CAT-Net"}, {"uid": "github/rathnakumars/difference-smoothing", "html_url": "https://rseng.github.io/software/repository/github/rathnakumars/difference-smoothing", "api_url": "https://rseng.github.io/software/api/repos/github/rathnakumars/difference-smoothing"}, {"uid": "github/bxia888/CEFCIG", "html_url": "https://rseng.github.io/software/repository/github/bxia888/CEFCIG", "api_url": "https://rseng.github.io/software/api/repos/github/bxia888/CEFCIG"}, {"uid": "github/michaelhb/superplot", "html_url": "https://rseng.github.io/software/repository/github/michaelhb/superplot", "api_url": "https://rseng.github.io/software/api/repos/github/michaelhb/superplot"}, {"uid": "github/julie-forman-kay-lab/SPyCi-PDB", "html_url": "https://rseng.github.io/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", "api_url": "https://rseng.github.io/software/api/repos/github/julie-forman-kay-lab/SPyCi-PDB"}, {"uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/MoSDeF-dihedral-fit"}, {"uid": "github/GOMC-WSU/GOMC", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/GOMC", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/GOMC"}, {"uid": "github/rx-li/EasyCellType", "html_url": "https://rseng.github.io/software/repository/github/rx-li/EasyCellType", "api_url": "https://rseng.github.io/software/api/repos/github/rx-li/EasyCellType"}, {"uid": "github/RoelofBerg/limereg", "html_url": "https://rseng.github.io/software/repository/github/RoelofBerg/limereg", "api_url": "https://rseng.github.io/software/api/repos/github/RoelofBerg/limereg"}, {"uid": "github/crs4/rocrate-validator", "html_url": "https://rseng.github.io/software/repository/github/crs4/rocrate-validator", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/rocrate-validator"}, {"uid": "github/crs4/life_monitor", "html_url": "https://rseng.github.io/software/repository/github/crs4/life_monitor", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/life_monitor"}, {"uid": "github/arangrhie/merfin", "html_url": "https://rseng.github.io/software/repository/github/arangrhie/merfin", "api_url": "https://rseng.github.io/software/api/repos/github/arangrhie/merfin"}, {"uid": "github/Ajstros/pyripherals", "html_url": "https://rseng.github.io/software/repository/github/Ajstros/pyripherals", "api_url": "https://rseng.github.io/software/api/repos/github/Ajstros/pyripherals"}, {"uid": "github/FastMLC/fMLC", "html_url": "https://rseng.github.io/software/repository/github/FastMLC/fMLC", "api_url": "https://rseng.github.io/software/api/repos/github/FastMLC/fMLC"}, {"uid": "github/darthoctopus/reggae", "html_url": "https://rseng.github.io/software/repository/github/darthoctopus/reggae", "api_url": "https://rseng.github.io/software/api/repos/github/darthoctopus/reggae"}, {"uid": "github/astro-friedel/CADRE", "html_url": "https://rseng.github.io/software/repository/github/astro-friedel/CADRE", "api_url": "https://rseng.github.io/software/api/repos/github/astro-friedel/CADRE"}, {"uid": "github/canimus/cuallee", "html_url": "https://rseng.github.io/software/repository/github/canimus/cuallee", "api_url": "https://rseng.github.io/software/api/repos/github/canimus/cuallee"}, {"uid": "github/CSUBioGroup/GraphLncLoc", "html_url": "https://rseng.github.io/software/repository/github/CSUBioGroup/GraphLncLoc", "api_url": "https://rseng.github.io/software/api/repos/github/CSUBioGroup/GraphLncLoc"}, {"uid": "github/lightning-project/lightning", "html_url": "https://rseng.github.io/software/repository/github/lightning-project/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/lightning-project/lightning"}, {"uid": "github/ariedel/lacewing", "html_url": "https://rseng.github.io/software/repository/github/ariedel/lacewing", "api_url": "https://rseng.github.io/software/api/repos/github/ariedel/lacewing"}, {"uid": "github/SophieMLV/axionHMcode", "html_url": "https://rseng.github.io/software/repository/github/SophieMLV/axionHMcode", "api_url": "https://rseng.github.io/software/api/repos/github/SophieMLV/axionHMcode"}, {"uid": "github/DMGW-Goethe/imripy", "html_url": "https://rseng.github.io/software/repository/github/DMGW-Goethe/imripy", "api_url": "https://rseng.github.io/software/api/repos/github/DMGW-Goethe/imripy"}, {"uid": "github/gouverneurp/eVAS", "html_url": "https://rseng.github.io/software/repository/github/gouverneurp/eVAS", "api_url": "https://rseng.github.io/software/api/repos/github/gouverneurp/eVAS"}, {"uid": "github/epiforecasts/covidregionaldata", "html_url": "https://rseng.github.io/software/repository/github/epiforecasts/covidregionaldata", "api_url": "https://rseng.github.io/software/api/repos/github/epiforecasts/covidregionaldata"}, {"uid": "github/fred3m/toyz", "html_url": "https://rseng.github.io/software/repository/github/fred3m/toyz", "api_url": "https://rseng.github.io/software/api/repos/github/fred3m/toyz"}, {"uid": "github/hablabx/rfast", "html_url": "https://rseng.github.io/software/repository/github/hablabx/rfast", "api_url": "https://rseng.github.io/software/api/repos/github/hablabx/rfast"}, {"uid": "github/kateharborne/SimSpin", "html_url": "https://rseng.github.io/software/repository/github/kateharborne/SimSpin", "api_url": "https://rseng.github.io/software/api/repos/github/kateharborne/SimSpin"}, {"uid": "github/dingshandeng/diskmint", "html_url": "https://rseng.github.io/software/repository/github/dingshandeng/diskmint", "api_url": "https://rseng.github.io/software/api/repos/github/dingshandeng/diskmint"}, {"uid": "github/merenlab/anvio", "html_url": "https://rseng.github.io/software/repository/github/merenlab/anvio", "api_url": "https://rseng.github.io/software/api/repos/github/merenlab/anvio"}, {"uid": "github/GregoryFaust/samblaster", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/samblaster", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/samblaster"}, {"uid": "github/GregoryFaust/yaha", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/yaha", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/yaha"}, {"uid": "github/ggonnella/gfapy", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/gfapy", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/gfapy"}, {"uid": "github/ggonnella/fastsubtrees", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/fastsubtrees", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/fastsubtrees"}, {"uid": "github/ggonnella/rgfa", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/rgfa", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/rgfa"}, {"uid": "github/ewels/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/ewels/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/ewels/MultiQC"}, {"uid": "github/tacazares/SeedMatchR", "html_url": "https://rseng.github.io/software/repository/github/tacazares/SeedMatchR", "api_url": "https://rseng.github.io/software/api/repos/github/tacazares/SeedMatchR"}, {"uid": "github/fzi-forschungszentrum-informatik/TSInterpret", "html_url": "https://rseng.github.io/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", "api_url": "https://rseng.github.io/software/api/repos/github/fzi-forschungszentrum-informatik/TSInterpret"}, {"uid": "github/auckland-cosmo/interp-mc", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/interp-mc", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/interp-mc"}, {"uid": "github/auckland-cosmo/defrost-mpi", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/defrost-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/defrost-mpi"}, {"uid": "github/auckland-cosmo/PyUltraLight", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/PyUltraLight", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/PyUltraLight"}, {"uid": "github/yangao07/abPOA", "html_url": "https://rseng.github.io/software/repository/github/yangao07/abPOA", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/abPOA"}, {"uid": "github/yangao07/TideHunter", "html_url": "https://rseng.github.io/software/repository/github/yangao07/TideHunter", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/TideHunter"}, {"uid": "github/BRAIN-TO/GIRFReco.jl", "html_url": "https://rseng.github.io/software/repository/github/BRAIN-TO/GIRFReco.jl", "api_url": "https://rseng.github.io/software/api/repos/github/BRAIN-TO/GIRFReco.jl"}, {"uid": "github/hemanthpruthvi/PyAstroPol", "html_url": "https://rseng.github.io/software/repository/github/hemanthpruthvi/PyAstroPol", "api_url": "https://rseng.github.io/software/api/repos/github/hemanthpruthvi/PyAstroPol"}, {"uid": "github/cmoestl/3DCORE", "html_url": "https://rseng.github.io/software/repository/github/cmoestl/3DCORE", "api_url": "https://rseng.github.io/software/api/repos/github/cmoestl/3DCORE"}, {"uid": "github/AstarVienna/skycalc_ipy", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/skycalc_ipy", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/skycalc_ipy"}, {"uid": "github/AstarVienna/ScopeSim_Templates", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/ScopeSim_Templates", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/ScopeSim_Templates"}, {"uid": "github/AstarVienna/irdb", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/irdb", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/irdb"}, {"uid": "github/AstarVienna/Pyckles", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/Pyckles", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/Pyckles"}, {"uid": "github/AstarVienna/AnisoCADO", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/AnisoCADO", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/AnisoCADO"}, {"uid": "github/flabarga/iSTARMOD", "html_url": "https://rseng.github.io/software/repository/github/flabarga/iSTARMOD", "api_url": "https://rseng.github.io/software/api/repos/github/flabarga/iSTARMOD"}, {"uid": "github/IRL2/nanover-server-py", "html_url": "https://rseng.github.io/software/repository/github/IRL2/nanover-server-py", "api_url": "https://rseng.github.io/software/api/repos/github/IRL2/nanover-server-py"}, {"uid": "github/uclchem/Chemulator", "html_url": "https://rseng.github.io/software/repository/github/uclchem/Chemulator", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/Chemulator"}, {"uid": "github/uclchem/SpectralRadex", "html_url": "https://rseng.github.io/software/repository/github/uclchem/SpectralRadex", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/SpectralRadex"}, {"uid": "github/xinyiguan/py2lispIDyOM", "html_url": "https://rseng.github.io/software/repository/github/xinyiguan/py2lispIDyOM", "api_url": "https://rseng.github.io/software/api/repos/github/xinyiguan/py2lispIDyOM"}, {"uid": "github/InfOmics/PanDelos-frags", "html_url": "https://rseng.github.io/software/repository/github/InfOmics/PanDelos-frags", "api_url": "https://rseng.github.io/software/api/repos/github/InfOmics/PanDelos-frags"}, {"uid": "github/Sm00thix/IKPLS", "html_url": "https://rseng.github.io/software/repository/github/Sm00thix/IKPLS", "api_url": "https://rseng.github.io/software/api/repos/github/Sm00thix/IKPLS"}, {"uid": "github/joglekara/VlaPy", "html_url": "https://rseng.github.io/software/repository/github/joglekara/VlaPy", "api_url": "https://rseng.github.io/software/api/repos/github/joglekara/VlaPy"}, {"uid": "github/pratheesh3780/grapesAgri1", "html_url": "https://rseng.github.io/software/repository/github/pratheesh3780/grapesAgri1", "api_url": "https://rseng.github.io/software/api/repos/github/pratheesh3780/grapesAgri1"}, {"uid": "github/vbaliga/gaussplotR", "html_url": "https://rseng.github.io/software/repository/github/vbaliga/gaussplotR", "api_url": "https://rseng.github.io/software/api/repos/github/vbaliga/gaussplotR"}, {"uid": "github/shankarpandala/lazypredict", "html_url": "https://rseng.github.io/software/repository/github/shankarpandala/lazypredict", "api_url": "https://rseng.github.io/software/api/repos/github/shankarpandala/lazypredict"}, {"uid": "github/jradavenport/appaloosa", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/appaloosa", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/appaloosa"}, {"uid": "github/jradavenport/FBEYE", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/FBEYE", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/FBEYE"}, {"uid": "github/jradavenport/TheHammer", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/TheHammer", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/TheHammer"}, {"uid": "github/logological/gpp", "html_url": "https://rseng.github.io/software/repository/github/logological/gpp", "api_url": "https://rseng.github.io/software/api/repos/github/logological/gpp"}, {"uid": "github/nbarbey/TomograPy", "html_url": "https://rseng.github.io/software/repository/github/nbarbey/TomograPy", "api_url": "https://rseng.github.io/software/api/repos/github/nbarbey/TomograPy"}, {"uid": "github/Qiskit-Extensions/qiskit-dynamics", "html_url": "https://rseng.github.io/software/repository/github/Qiskit-Extensions/qiskit-dynamics", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit-Extensions/qiskit-dynamics"}, {"uid": "github/TPI-Immunogenetics/igmat", "html_url": "https://rseng.github.io/software/repository/github/TPI-Immunogenetics/igmat", "api_url": "https://rseng.github.io/software/api/repos/github/TPI-Immunogenetics/igmat"}, {"uid": "github/comprna/reorientexpress", "html_url": "https://rseng.github.io/software/repository/github/comprna/reorientexpress", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/reorientexpress"}, {"uid": "github/comprna/SUPPA", "html_url": "https://rseng.github.io/software/repository/github/comprna/SUPPA", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/SUPPA"}, {"uid": "github/infer-actively/pymdp", "html_url": "https://rseng.github.io/software/repository/github/infer-actively/pymdp", "api_url": "https://rseng.github.io/software/api/repos/github/infer-actively/pymdp"}, {"uid": "github/SimVascular/svZeroDSolver", "html_url": "https://rseng.github.io/software/repository/github/SimVascular/svZeroDSolver", "api_url": "https://rseng.github.io/software/api/repos/github/SimVascular/svZeroDSolver"}, {"uid": "github/pikarpov-LANL/Sapsan", "html_url": "https://rseng.github.io/software/repository/github/pikarpov-LANL/Sapsan", "api_url": "https://rseng.github.io/software/api/repos/github/pikarpov-LANL/Sapsan"}, {"uid": "github/jpmens/jo", "html_url": "https://rseng.github.io/software/repository/github/jpmens/jo", "api_url": "https://rseng.github.io/software/api/repos/github/jpmens/jo"}, {"uid": "github/moble/scri", "html_url": "https://rseng.github.io/software/repository/github/moble/scri", "api_url": "https://rseng.github.io/software/api/repos/github/moble/scri"}, {"uid": "github/moble/GWFrames", "html_url": "https://rseng.github.io/software/repository/github/moble/GWFrames", "api_url": "https://rseng.github.io/software/api/repos/github/moble/GWFrames"}, {"uid": "github/damcb/tyssue", "html_url": "https://rseng.github.io/software/repository/github/damcb/tyssue", "api_url": "https://rseng.github.io/software/api/repos/github/damcb/tyssue"}, {"uid": "github/recipy/recipy", "html_url": "https://rseng.github.io/software/repository/github/recipy/recipy", "api_url": "https://rseng.github.io/software/api/repos/github/recipy/recipy"}, {"uid": "github/Nicholaswogan/photochem", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/photochem", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/photochem"}, {"uid": "github/Nicholaswogan/PhotochemPy", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/PhotochemPy", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/PhotochemPy"}, {"uid": "github/AOtools/aotools", "html_url": "https://rseng.github.io/software/repository/github/AOtools/aotools", "api_url": "https://rseng.github.io/software/api/repos/github/AOtools/aotools"}, {"uid": "github/hsergi/Roman_Coronagraph_ETC", "html_url": "https://rseng.github.io/software/repository/github/hsergi/Roman_Coronagraph_ETC", "api_url": "https://rseng.github.io/software/api/repos/github/hsergi/Roman_Coronagraph_ETC"}, {"uid": "github/HUST-DataMan/FRMC", "html_url": "https://rseng.github.io/software/repository/github/HUST-DataMan/FRMC", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-DataMan/FRMC"}, {"uid": "github/amueller/word_cloud", "html_url": "https://rseng.github.io/software/repository/github/amueller/word_cloud", "api_url": "https://rseng.github.io/software/api/repos/github/amueller/word_cloud"}, {"uid": "github/SynxFlow/SynxFlow", "html_url": "https://rseng.github.io/software/repository/github/SynxFlow/SynxFlow", "api_url": "https://rseng.github.io/software/api/repos/github/SynxFlow/SynxFlow"}, {"uid": "github/gokalpcelik/ROHMMCLI", "html_url": "https://rseng.github.io/software/repository/github/gokalpcelik/ROHMMCLI", "api_url": "https://rseng.github.io/software/api/repos/github/gokalpcelik/ROHMMCLI"}, {"uid": "github/kolikem/loma", "html_url": "https://rseng.github.io/software/repository/github/kolikem/loma", "api_url": "https://rseng.github.io/software/api/repos/github/kolikem/loma"}, {"uid": "github/FofanovLab/mtsv_tools", "html_url": "https://rseng.github.io/software/repository/github/FofanovLab/mtsv_tools", "api_url": "https://rseng.github.io/software/api/repos/github/FofanovLab/mtsv_tools"}, {"uid": "github/r-cas/caracas", "html_url": "https://rseng.github.io/software/repository/github/r-cas/caracas", "api_url": "https://rseng.github.io/software/api/repos/github/r-cas/caracas"}, {"uid": "github/stedolan/jq", "html_url": "https://rseng.github.io/software/repository/github/stedolan/jq", "api_url": "https://rseng.github.io/software/api/repos/github/stedolan/jq"}, {"uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", "html_url": "https://rseng.github.io/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", "api_url": "https://rseng.github.io/software/api/repos/github/sunnyvagnozzi/Braneworld-extra-dimensions"}, {"uid": "github/johannesulf/dsigma", "html_url": "https://rseng.github.io/software/repository/github/johannesulf/dsigma", "api_url": "https://rseng.github.io/software/api/repos/github/johannesulf/dsigma"}, {"uid": "github/melobio/Attune", "html_url": "https://rseng.github.io/software/repository/github/melobio/Attune", "api_url": "https://rseng.github.io/software/api/repos/github/melobio/Attune"}, {"uid": "github/maserlib/ExPRES", "html_url": "https://rseng.github.io/software/repository/github/maserlib/ExPRES", "api_url": "https://rseng.github.io/software/api/repos/github/maserlib/ExPRES"}, {"uid": "github/mcfrith/dnarrange", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/dnarrange", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/dnarrange"}, {"uid": "github/mcfrith/tandem-genotypes", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/tandem-genotypes", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/tandem-genotypes"}, {"uid": "github/fair-data/fairdatapoint-client", "html_url": "https://rseng.github.io/software/repository/github/fair-data/fairdatapoint-client", "api_url": "https://rseng.github.io/software/api/repos/github/fair-data/fairdatapoint-client"}, {"uid": "github/NicOudart/PyBWE", "html_url": "https://rseng.github.io/software/repository/github/NicOudart/PyBWE", "api_url": "https://rseng.github.io/software/api/repos/github/NicOudart/PyBWE"}, {"uid": "github/tessgi/tvguide", "html_url": "https://rseng.github.io/software/repository/github/tessgi/tvguide", "api_url": "https://rseng.github.io/software/api/repos/github/tessgi/tvguide"}, {"uid": "github/gbernstein/gbdes", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/gbdes", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/gbdes"}, {"uid": "github/gbernstein/pixmappy", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/pixmappy", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/pixmappy"}, {"uid": "github/ProfessorBrunner/rc3-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ProfessorBrunner/rc3-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ProfessorBrunner/rc3-pipeline"}, {"uid": "github/netrias/rnassist", "html_url": "https://rseng.github.io/software/repository/github/netrias/rnassist", "api_url": "https://rseng.github.io/software/api/repos/github/netrias/rnassist"}, {"uid": "github/childmindresearch/wristpy", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/wristpy", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/wristpy"}, {"uid": "github/childmindresearch/actisleep-tracker", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/actisleep-tracker", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/actisleep-tracker"}, {"uid": "github/ColdThunder/NR-code", "html_url": "https://rseng.github.io/software/repository/github/ColdThunder/NR-code", "api_url": "https://rseng.github.io/software/api/repos/github/ColdThunder/NR-code"}, {"uid": "github/lysovosyl/NanoDeep", "html_url": "https://rseng.github.io/software/repository/github/lysovosyl/NanoDeep", "api_url": "https://rseng.github.io/software/api/repos/github/lysovosyl/NanoDeep"}, {"uid": "github/gaelforget/MITgcm.jl", "html_url": "https://rseng.github.io/software/repository/github/gaelforget/MITgcm.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gaelforget/MITgcm.jl"}, {"uid": "github/HKU-BAL/Clair3", "html_url": "https://rseng.github.io/software/repository/github/HKU-BAL/Clair3", "api_url": "https://rseng.github.io/software/api/repos/github/HKU-BAL/Clair3"}, {"uid": "github/bretthandrews/flexCE", "html_url": "https://rseng.github.io/software/repository/github/bretthandrews/flexCE", "api_url": "https://rseng.github.io/software/api/repos/github/bretthandrews/flexCE"}, {"uid": "github/sdnjly/WSDL-AD", "html_url": "https://rseng.github.io/software/repository/github/sdnjly/WSDL-AD", "api_url": "https://rseng.github.io/software/api/repos/github/sdnjly/WSDL-AD"}, {"uid": "github/ec-jrc/nrt", "html_url": "https://rseng.github.io/software/repository/github/ec-jrc/nrt", "api_url": "https://rseng.github.io/software/api/repos/github/ec-jrc/nrt"}, {"uid": "github/materialsproject/pymatgen-analysis-defects", "html_url": "https://rseng.github.io/software/repository/github/materialsproject/pymatgen-analysis-defects", "api_url": "https://rseng.github.io/software/api/repos/github/materialsproject/pymatgen-analysis-defects"}, {"uid": "github/Degiacomi-Lab/molearn", "html_url": "https://rseng.github.io/software/repository/github/Degiacomi-Lab/molearn", "api_url": "https://rseng.github.io/software/api/repos/github/Degiacomi-Lab/molearn"}, {"uid": "github/bge-barcoding/gene_fetch", "html_url": "https://rseng.github.io/software/repository/github/bge-barcoding/gene_fetch", "api_url": "https://rseng.github.io/software/api/repos/github/bge-barcoding/gene_fetch"}, {"uid": "github/surf-eds/one-button-compute", "html_url": "https://rseng.github.io/software/repository/github/surf-eds/one-button-compute", "api_url": "https://rseng.github.io/software/api/repos/github/surf-eds/one-button-compute"}, {"uid": "github/FengTaoSMU/MOBFinder", "html_url": "https://rseng.github.io/software/repository/github/FengTaoSMU/MOBFinder", "api_url": "https://rseng.github.io/software/api/repos/github/FengTaoSMU/MOBFinder"}, {"uid": "github/shbhuk/mrexo", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/mrexo", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/mrexo"}, {"uid": "github/shbhuk/barycorrpy", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/barycorrpy", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/barycorrpy"}, {"uid": "github/zjupgx/modig", "html_url": "https://rseng.github.io/software/repository/github/zjupgx/modig", "api_url": "https://rseng.github.io/software/api/repos/github/zjupgx/modig"}, {"uid": "github/miguelcarcamov/csromer", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/csromer", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/csromer"}, {"uid": "github/miguelcarcamov/gpuvmem", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/gpuvmem", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/gpuvmem"}, {"uid": "github/joacoh/wise2mbh", "html_url": "https://rseng.github.io/software/repository/github/joacoh/wise2mbh", "api_url": "https://rseng.github.io/software/api/repos/github/joacoh/wise2mbh"}, {"uid": "github/samuelmurail/af_analysis", "html_url": "https://rseng.github.io/software/repository/github/samuelmurail/af_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/samuelmurail/af_analysis"}, {"uid": "github/FergusDonnan/PAHDecomp", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PAHDecomp", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PAHDecomp"}, {"uid": "github/FergusDonnan/PyROA", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PyROA", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PyROA"}, {"uid": "github/FergusDonnan/Running-Optimal-Average", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/Running-Optimal-Average", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/Running-Optimal-Average"}, {"uid": "github/openneuropet/PET2BIDS", "html_url": "https://rseng.github.io/software/repository/github/openneuropet/PET2BIDS", "api_url": "https://rseng.github.io/software/api/repos/github/openneuropet/PET2BIDS"}, {"uid": "github/joshuakt/Oxygen-False-Positives", "html_url": "https://rseng.github.io/software/repository/github/joshuakt/Oxygen-False-Positives", "api_url": "https://rseng.github.io/software/api/repos/github/joshuakt/Oxygen-False-Positives"}, {"uid": "github/Bahler-Lab/pyphe", "html_url": "https://rseng.github.io/software/repository/github/Bahler-Lab/pyphe", "api_url": "https://rseng.github.io/software/api/repos/github/Bahler-Lab/pyphe"}, {"uid": "github/leapigufpb/FuzzyClass", "html_url": "https://rseng.github.io/software/repository/github/leapigufpb/FuzzyClass", "api_url": "https://rseng.github.io/software/api/repos/github/leapigufpb/FuzzyClass"}, {"uid": "github/oliveirara/polyMV", "html_url": "https://rseng.github.io/software/repository/github/oliveirara/polyMV", "api_url": "https://rseng.github.io/software/api/repos/github/oliveirara/polyMV"}, {"uid": "github/yyZhang14/dbEssLnc", "html_url": "https://rseng.github.io/software/repository/github/yyZhang14/dbEssLnc", "api_url": "https://rseng.github.io/software/api/repos/github/yyZhang14/dbEssLnc"}, {"uid": "github/Cascella-Group-UiO/HyMD", "html_url": "https://rseng.github.io/software/repository/github/Cascella-Group-UiO/HyMD", "api_url": "https://rseng.github.io/software/api/repos/github/Cascella-Group-UiO/HyMD"}, {"uid": "github/thegenemyers/DAMAPPER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAMAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAMAPPER"}, {"uid": "github/thegenemyers/DAZZ_DB", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAZZ_DB", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAZZ_DB"}, {"uid": "github/thegenemyers/FASTK", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/FASTK", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/FASTK"}, {"uid": "github/thegenemyers/DEXTRACTOR", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DEXTRACTOR", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DEXTRACTOR"}, {"uid": "github/thegenemyers/DALIGNER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DALIGNER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DALIGNER"}, {"uid": "github/qmarcou/IGoR", "html_url": "https://rseng.github.io/software/repository/github/qmarcou/IGoR", "api_url": "https://rseng.github.io/software/api/repos/github/qmarcou/IGoR"}, {"uid": "github/hover2pi/SEDkit", "html_url": "https://rseng.github.io/software/repository/github/hover2pi/SEDkit", "api_url": "https://rseng.github.io/software/api/repos/github/hover2pi/SEDkit"}, {"uid": "github/EnricoCorsaro/DIAMONDS", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/DIAMONDS", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/DIAMONDS"}, {"uid": "github/EnricoCorsaro/FAMED", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/FAMED", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/FAMED"}, {"uid": "github/daiqile96/OTTERS_paper", "html_url": "https://rseng.github.io/software/repository/github/daiqile96/OTTERS_paper", "api_url": "https://rseng.github.io/software/api/repos/github/daiqile96/OTTERS_paper"}, {"uid": "github/EdoardoCarlesi/cmbeasy", "html_url": "https://rseng.github.io/software/repository/github/EdoardoCarlesi/cmbeasy", "api_url": "https://rseng.github.io/software/api/repos/github/EdoardoCarlesi/cmbeasy"}, {"uid": "github/kuanrongchan/COVID19-severity", "html_url": "https://rseng.github.io/software/repository/github/kuanrongchan/COVID19-severity", "api_url": "https://rseng.github.io/software/api/repos/github/kuanrongchan/COVID19-severity"}, {"uid": "github/acbecker/hotpants", "html_url": "https://rseng.github.io/software/repository/github/acbecker/hotpants", "api_url": "https://rseng.github.io/software/api/repos/github/acbecker/hotpants"}, {"uid": "github/tjiangHIT/cuteSV", "html_url": "https://rseng.github.io/software/repository/github/tjiangHIT/cuteSV", "api_url": "https://rseng.github.io/software/api/repos/github/tjiangHIT/cuteSV"}, {"uid": "github/tombisho/dsSyntheticClient", "html_url": "https://rseng.github.io/software/repository/github/tombisho/dsSyntheticClient", "api_url": "https://rseng.github.io/software/api/repos/github/tombisho/dsSyntheticClient"}, {"uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection"}, {"uid": "github/Yash-10/beta-sgp", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/beta-sgp", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/beta-sgp"}, {"uid": "github/xszhu-lab/AGImpute", "html_url": "https://rseng.github.io/software/repository/github/xszhu-lab/AGImpute", "api_url": "https://rseng.github.io/software/api/repos/github/xszhu-lab/AGImpute"}, {"uid": "github/icecube/TauRunner", "html_url": "https://rseng.github.io/software/repository/github/icecube/TauRunner", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/TauRunner"}, {"uid": "github/icecube/toise", "html_url": "https://rseng.github.io/software/repository/github/icecube/toise", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/toise"}, {"uid": "github/icecube/FIRESONG", "html_url": "https://rseng.github.io/software/repository/github/icecube/FIRESONG", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/FIRESONG"}, {"uid": "github/macs3-project/MACS", "html_url": "https://rseng.github.io/software/repository/github/macs3-project/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/macs3-project/MACS"}, {"uid": "github/Kuifje02/vrpy", "html_url": "https://rseng.github.io/software/repository/github/Kuifje02/vrpy", "api_url": "https://rseng.github.io/software/api/repos/github/Kuifje02/vrpy"}, {"uid": "github/COMBINE-lab/RapMap", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/RapMap", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/RapMap"}, {"uid": "github/COMBINE-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/salmon"}, {"uid": "github/COMBINE-lab/terminus", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/terminus", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/terminus"}, {"uid": "github/COMBINE-lab/pufferfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/pufferfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/pufferfish"}, {"uid": "github/COMBINE-lab/simpleaf", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/simpleaf", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/simpleaf"}, {"uid": "github/COMBINE-lab/oarfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/oarfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/oarfish"}, {"uid": "github/COMBINE-lab/libgff", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/libgff", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/libgff"}, {"uid": "github/COMBINE-lab/alevin-fry", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/alevin-fry", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/alevin-fry"}, {"uid": "github/COMBINE-lab/cuttlefish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/cuttlefish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/cuttlefish"}, {"uid": "github/matta-research-group/SwiftPol", "html_url": "https://rseng.github.io/software/repository/github/matta-research-group/SwiftPol", "api_url": "https://rseng.github.io/software/api/repos/github/matta-research-group/SwiftPol"}, {"uid": "github/RafaelSdeSouza/capivara", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/capivara", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/capivara"}, {"uid": "github/RafaelSdeSouza/qrpca", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/qrpca", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/qrpca"}, {"uid": "github/qiankunzizairen/PanGIA", "html_url": "https://rseng.github.io/software/repository/github/qiankunzizairen/PanGIA", "api_url": "https://rseng.github.io/software/api/repos/github/qiankunzizairen/PanGIA"}, {"uid": "github/alesantuz/musclesyneRgies", "html_url": "https://rseng.github.io/software/repository/github/alesantuz/musclesyneRgies", "api_url": "https://rseng.github.io/software/api/repos/github/alesantuz/musclesyneRgies"}, {"uid": "github/bd-j/prospector", "html_url": "https://rseng.github.io/software/repository/github/bd-j/prospector", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/prospector"}, {"uid": "github/bd-j/sedpy", "html_url": "https://rseng.github.io/software/repository/github/bd-j/sedpy", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/sedpy"}, {"uid": "github/bd-j/forcepho", "html_url": "https://rseng.github.io/software/repository/github/bd-j/forcepho", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/forcepho"}, {"uid": "github/lczech/gappa", "html_url": "https://rseng.github.io/software/repository/github/lczech/gappa", "api_url": "https://rseng.github.io/software/api/repos/github/lczech/gappa"}, {"uid": "github/devanshkv/fetch", "html_url": "https://rseng.github.io/software/repository/github/devanshkv/fetch", "api_url": "https://rseng.github.io/software/api/repos/github/devanshkv/fetch"}, {"uid": "github/robdjeff/eagles", "html_url": "https://rseng.github.io/software/repository/github/robdjeff/eagles", "api_url": "https://rseng.github.io/software/api/repos/github/robdjeff/eagles"}, {"uid": "github/mcataneo/pyLDT-cosmo", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/pyLDT-cosmo", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/pyLDT-cosmo"}, {"uid": "github/mcataneo/mochi_class_public", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/mochi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/mochi_class_public"}, {"uid": "github/raddleverse/MimiBRICK.jl", "html_url": "https://rseng.github.io/software/repository/github/raddleverse/MimiBRICK.jl", "api_url": "https://rseng.github.io/software/api/repos/github/raddleverse/MimiBRICK.jl"}, {"uid": "github/cdanielmachado/reframed", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/reframed", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/reframed"}, {"uid": "github/cdanielmachado/carveme", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/carveme", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/carveme"}, {"uid": "github/HeracleBT/vEMstitch", "html_url": "https://rseng.github.io/software/repository/github/HeracleBT/vEMstitch", "api_url": "https://rseng.github.io/software/api/repos/github/HeracleBT/vEMstitch"}, {"uid": "github/daehwankimlab/hisat2", "html_url": "https://rseng.github.io/software/repository/github/daehwankimlab/hisat2", "api_url": "https://rseng.github.io/software/api/repos/github/daehwankimlab/hisat2"}, {"uid": "github/CHRF-Genomics/Paratype", "html_url": "https://rseng.github.io/software/repository/github/CHRF-Genomics/Paratype", "api_url": "https://rseng.github.io/software/api/repos/github/CHRF-Genomics/Paratype"}, {"uid": "github/smeingast/PNICER", "html_url": "https://rseng.github.io/software/repository/github/smeingast/PNICER", "api_url": "https://rseng.github.io/software/api/repos/github/smeingast/PNICER"}, {"uid": "github/Sulstice/cocktail-shaker", "html_url": "https://rseng.github.io/software/repository/github/Sulstice/cocktail-shaker", "api_url": "https://rseng.github.io/software/api/repos/github/Sulstice/cocktail-shaker"}, {"uid": "github/cdominik/optool", "html_url": "https://rseng.github.io/software/repository/github/cdominik/optool", "api_url": "https://rseng.github.io/software/api/repos/github/cdominik/optool"}, {"uid": "github/PEJpOhno/SMiPoly", "html_url": "https://rseng.github.io/software/repository/github/PEJpOhno/SMiPoly", "api_url": "https://rseng.github.io/software/api/repos/github/PEJpOhno/SMiPoly"}, {"uid": "github/youngkaneda/DemeterWatch", "html_url": "https://rseng.github.io/software/repository/github/youngkaneda/DemeterWatch", "api_url": "https://rseng.github.io/software/api/repos/github/youngkaneda/DemeterWatch"}, {"uid": "github/zblz/naima", "html_url": "https://rseng.github.io/software/repository/github/zblz/naima", "api_url": "https://rseng.github.io/software/api/repos/github/zblz/naima"}, {"uid": "github/QibangLiu/PDLSM-FEM_mpi", "html_url": "https://rseng.github.io/software/repository/github/QibangLiu/PDLSM-FEM_mpi", "api_url": "https://rseng.github.io/software/api/repos/github/QibangLiu/PDLSM-FEM_mpi"}, {"uid": "github/danmoser/pyhdust", "html_url": "https://rseng.github.io/software/repository/github/danmoser/pyhdust", "api_url": "https://rseng.github.io/software/api/repos/github/danmoser/pyhdust"}, {"uid": "github/kegiljarhus/pyBEMT", "html_url": "https://rseng.github.io/software/repository/github/kegiljarhus/pyBEMT", "api_url": "https://rseng.github.io/software/api/repos/github/kegiljarhus/pyBEMT"}, {"uid": "github/probml/dynamax", "html_url": "https://rseng.github.io/software/repository/github/probml/dynamax", "api_url": "https://rseng.github.io/software/api/repos/github/probml/dynamax"}, {"uid": "github/ComtekAdvancedStructures/cmstatr", "html_url": "https://rseng.github.io/software/repository/github/ComtekAdvancedStructures/cmstatr", "api_url": "https://rseng.github.io/software/api/repos/github/ComtekAdvancedStructures/cmstatr"}, {"uid": "github/BIMSBbioinfo/pigx_rnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_rnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_rnaseq"}, {"uid": "github/BIMSBbioinfo/pigx_scrnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_scrnaseq"}, {"uid": "github/Jeremycouturier/NcorpiON", "html_url": "https://rseng.github.io/software/repository/github/Jeremycouturier/NcorpiON", "api_url": "https://rseng.github.io/software/api/repos/github/Jeremycouturier/NcorpiON"}, {"uid": "github/ghislainv/forestatrisk", "html_url": "https://rseng.github.io/software/repository/github/ghislainv/forestatrisk", "api_url": "https://rseng.github.io/software/api/repos/github/ghislainv/forestatrisk"}, {"uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar"}, {"uid": "github/DreamCloud-Project/McSim-TLM-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-TLM-NoC"}, {"uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-SimGrid"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-NoC"}, {"uid": "github/ska-sa/katdal", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/katdal", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/katdal"}, {"uid": "github/ska-sa/hibayes", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/hibayes", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/hibayes"}, {"uid": "github/artis-mcrt/artis", "html_url": "https://rseng.github.io/software/repository/github/artis-mcrt/artis", "api_url": "https://rseng.github.io/software/api/repos/github/artis-mcrt/artis"}, {"uid": "github/vanheeringen-lab/gimmemotifs", "html_url": "https://rseng.github.io/software/repository/github/vanheeringen-lab/gimmemotifs", "api_url": "https://rseng.github.io/software/api/repos/github/vanheeringen-lab/gimmemotifs"}, {"uid": "github/IRCAD/camp", "html_url": "https://rseng.github.io/software/repository/github/IRCAD/camp", "api_url": "https://rseng.github.io/software/api/repos/github/IRCAD/camp"}, {"uid": "github/constantAmateur/SoupX", "html_url": "https://rseng.github.io/software/repository/github/constantAmateur/SoupX", "api_url": "https://rseng.github.io/software/api/repos/github/constantAmateur/SoupX"}, {"uid": "github/rfeldmann/leopy", "html_url": "https://rseng.github.io/software/repository/github/rfeldmann/leopy", "api_url": "https://rseng.github.io/software/api/repos/github/rfeldmann/leopy"}, {"uid": "github/pmoulos/metaseqR2", "html_url": "https://rseng.github.io/software/repository/github/pmoulos/metaseqR2", "api_url": "https://rseng.github.io/software/api/repos/github/pmoulos/metaseqR2"}, {"uid": "github/he2016012996/CABnet", "html_url": "https://rseng.github.io/software/repository/github/he2016012996/CABnet", "api_url": "https://rseng.github.io/software/api/repos/github/he2016012996/CABnet"}, {"uid": "github/pharo-project/pharo", "html_url": "https://rseng.github.io/software/repository/github/pharo-project/pharo", "api_url": "https://rseng.github.io/software/api/repos/github/pharo-project/pharo"}, {"uid": "github/bthorne93/PySM_public", "html_url": "https://rseng.github.io/software/repository/github/bthorne93/PySM_public", "api_url": "https://rseng.github.io/software/api/repos/github/bthorne93/PySM_public"}, {"uid": "github/IAMconsortium/pyam", "html_url": "https://rseng.github.io/software/repository/github/IAMconsortium/pyam", "api_url": "https://rseng.github.io/software/api/repos/github/IAMconsortium/pyam"}, {"uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", "html_url": "https://rseng.github.io/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", "api_url": "https://rseng.github.io/software/api/repos/github/Aarhus-Psychiatry-Research/timeseriesflattener"}, {"uid": "github/isovic/graphmap", "html_url": "https://rseng.github.io/software/repository/github/isovic/graphmap", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/graphmap"}, {"uid": "github/isovic/racon", "html_url": "https://rseng.github.io/software/repository/github/isovic/racon", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/racon"}, {"uid": "github/erling6232/imagedata", "html_url": "https://rseng.github.io/software/repository/github/erling6232/imagedata", "api_url": "https://rseng.github.io/software/api/repos/github/erling6232/imagedata"}, {"uid": "github/refresh-bio/agc", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/agc", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/agc"}, {"uid": "github/refresh-bio/whisper", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/whisper", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/whisper"}, {"uid": "github/RaRe-Technologies/gensim", "html_url": "https://rseng.github.io/software/repository/github/RaRe-Technologies/gensim", "api_url": "https://rseng.github.io/software/api/repos/github/RaRe-Technologies/gensim"}, {"uid": "github/telegraphic/fits2hdf", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/fits2hdf", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/fits2hdf"}, {"uid": "github/telegraphic/pygsm", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/pygsm", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/pygsm"}, {"uid": "github/STAR-Fusion/STAR-Fusion", "html_url": "https://rseng.github.io/software/repository/github/STAR-Fusion/STAR-Fusion", "api_url": "https://rseng.github.io/software/api/repos/github/STAR-Fusion/STAR-Fusion"}, {"uid": "github/MASILab/pyPheWAS", "html_url": "https://rseng.github.io/software/repository/github/MASILab/pyPheWAS", "api_url": "https://rseng.github.io/software/api/repos/github/MASILab/pyPheWAS"}, {"uid": "github/suneeshjacob/ACRoD", "html_url": "https://rseng.github.io/software/repository/github/suneeshjacob/ACRoD", "api_url": "https://rseng.github.io/software/api/repos/github/suneeshjacob/ACRoD"}, {"uid": "github/clawpack/pyclaw", "html_url": "https://rseng.github.io/software/repository/github/clawpack/pyclaw", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/pyclaw"}, {"uid": "github/clawpack/clawpack", "html_url": "https://rseng.github.io/software/repository/github/clawpack/clawpack", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/clawpack"}, {"uid": "github/kylejgillett/sounderpy", "html_url": "https://rseng.github.io/software/repository/github/kylejgillett/sounderpy", "api_url": "https://rseng.github.io/software/api/repos/github/kylejgillett/sounderpy"}, {"uid": "github/econ-ark/HARK", "html_url": "https://rseng.github.io/software/repository/github/econ-ark/HARK", "api_url": "https://rseng.github.io/software/api/repos/github/econ-ark/HARK"}, {"uid": "github/poissonconsulting/bbousuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bbousuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bbousuite"}, {"uid": "github/poissonconsulting/bisonpicsuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bisonpicsuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bisonpicsuite"}, {"uid": "github/pyiron/executorlib", "html_url": "https://rseng.github.io/software/repository/github/pyiron/executorlib", "api_url": "https://rseng.github.io/software/api/repos/github/pyiron/executorlib"}, {"uid": "github/Deyht/CIANNA", "html_url": "https://rseng.github.io/software/repository/github/Deyht/CIANNA", "api_url": "https://rseng.github.io/software/api/repos/github/Deyht/CIANNA"}, {"uid": "github/pyranges/pyrle", "html_url": "https://rseng.github.io/software/repository/github/pyranges/pyrle", "api_url": "https://rseng.github.io/software/api/repos/github/pyranges/pyrle"}, {"uid": "github/SeamusClarke/FragMent", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/FragMent", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/FragMent"}, {"uid": "github/SeamusClarke/BTS", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/BTS", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/BTS"}, {"uid": "github/linDing-groups/Deep-4mCW2V", "html_url": "https://rseng.github.io/software/repository/github/linDing-groups/Deep-4mCW2V", "api_url": "https://rseng.github.io/software/api/repos/github/linDing-groups/Deep-4mCW2V"}, {"uid": "github/timchurches/NetEpi-Collection", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Collection", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Collection"}, {"uid": "github/timchurches/NetEpi-Analysis", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Analysis"}, {"uid": "github/johnlees/pp-sketchlib", "html_url": "https://rseng.github.io/software/repository/github/johnlees/pp-sketchlib", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/pp-sketchlib"}, {"uid": "github/johnlees/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/johnlees/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/PopPUNK"}, {"uid": "github/johnlees/seer", "html_url": "https://rseng.github.io/software/repository/github/johnlees/seer", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/seer"}, {"uid": "github/dh4gan/taktent", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/taktent", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/taktent"}, {"uid": "github/dh4gan/oberon", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/oberon", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/oberon"}, {"uid": "github/dh4gan/grapus", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/grapus", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/grapus"}, {"uid": "github/dh4gan/tache", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/tache", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/tache"}, {"uid": "github/ynop/audiomate", "html_url": "https://rseng.github.io/software/repository/github/ynop/audiomate", "api_url": "https://rseng.github.io/software/api/repos/github/ynop/audiomate"}, {"uid": "github/folsomcp/specpolFlow", "html_url": "https://rseng.github.io/software/repository/github/folsomcp/specpolFlow", "api_url": "https://rseng.github.io/software/api/repos/github/folsomcp/specpolFlow"}, {"uid": "github/PENTACLE-Team/PENTACLE", "html_url": "https://rseng.github.io/software/repository/github/PENTACLE-Team/PENTACLE", "api_url": "https://rseng.github.io/software/api/repos/github/PENTACLE-Team/PENTACLE"}, {"uid": "github/riogroup/SORA", "html_url": "https://rseng.github.io/software/repository/github/riogroup/SORA", "api_url": "https://rseng.github.io/software/api/repos/github/riogroup/SORA"}, {"uid": "github/parsotat/batanalysis", "html_url": "https://rseng.github.io/software/repository/github/parsotat/batanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/parsotat/batanalysis"}, {"uid": "github/sherpa-deproject/deproject", "html_url": "https://rseng.github.io/software/repository/github/sherpa-deproject/deproject", "api_url": "https://rseng.github.io/software/api/repos/github/sherpa-deproject/deproject"}, {"uid": "github/VILLASframework/node", "html_url": "https://rseng.github.io/software/repository/github/VILLASframework/node", "api_url": "https://rseng.github.io/software/api/repos/github/VILLASframework/node"}, {"uid": "github/tingyuansen/The_Payne", "html_url": "https://rseng.github.io/software/repository/github/tingyuansen/The_Payne", "api_url": "https://rseng.github.io/software/api/repos/github/tingyuansen/The_Payne"}, {"uid": "github/nksaunders/giants", "html_url": "https://rseng.github.io/software/repository/github/nksaunders/giants", "api_url": "https://rseng.github.io/software/api/repos/github/nksaunders/giants"}, {"uid": "github/kathrinnp/DarkRayNet", "html_url": "https://rseng.github.io/software/repository/github/kathrinnp/DarkRayNet", "api_url": "https://rseng.github.io/software/api/repos/github/kathrinnp/DarkRayNet"}, {"uid": "github/Nicole-DH/ACP-MLC", "html_url": "https://rseng.github.io/software/repository/github/Nicole-DH/ACP-MLC", "api_url": "https://rseng.github.io/software/api/repos/github/Nicole-DH/ACP-MLC"}, {"uid": "github/nathandecaux/labelprop", "html_url": "https://rseng.github.io/software/repository/github/nathandecaux/labelprop", "api_url": "https://rseng.github.io/software/api/repos/github/nathandecaux/labelprop"}, {"uid": "github/Jacks0nJ/PyFPT", "html_url": "https://rseng.github.io/software/repository/github/Jacks0nJ/PyFPT", "api_url": "https://rseng.github.io/software/api/repos/github/Jacks0nJ/PyFPT"}, {"uid": "github/fjprichard/PyAFBF", "html_url": "https://rseng.github.io/software/repository/github/fjprichard/PyAFBF", "api_url": "https://rseng.github.io/software/api/repos/github/fjprichard/PyAFBF"}, {"uid": "github/scikit-learn/scikit-learn", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn/scikit-learn", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn/scikit-learn"}, {"uid": "github/aiidateam/aiida-core", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/aiida-core", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/aiida-core"}, {"uid": "github/aiidateam/kiwipy", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/kiwipy", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/kiwipy"}, {"uid": "github/markmbaum/GEOCLIM.jl", "html_url": "https://rseng.github.io/software/repository/github/markmbaum/GEOCLIM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/markmbaum/GEOCLIM.jl"}, {"uid": "github/torrance/pigi", "html_url": "https://rseng.github.io/software/repository/github/torrance/pigi", "api_url": "https://rseng.github.io/software/api/repos/github/torrance/pigi"}, {"uid": "github/m-d-grunnill/MetaCast", "html_url": "https://rseng.github.io/software/repository/github/m-d-grunnill/MetaCast", "api_url": "https://rseng.github.io/software/api/repos/github/m-d-grunnill/MetaCast"}, {"uid": "github/FINNGEN/lavaa-react", "html_url": "https://rseng.github.io/software/repository/github/FINNGEN/lavaa-react", "api_url": "https://rseng.github.io/software/api/repos/github/FINNGEN/lavaa-react"}, {"uid": "github/vmplacco/linemake", "html_url": "https://rseng.github.io/software/repository/github/vmplacco/linemake", "api_url": "https://rseng.github.io/software/api/repos/github/vmplacco/linemake"}, {"uid": "github/vals/umis", "html_url": "https://rseng.github.io/software/repository/github/vals/umis", "api_url": "https://rseng.github.io/software/api/repos/github/vals/umis"}, {"uid": "github/low-sky/cprops", "html_url": "https://rseng.github.io/software/repository/github/low-sky/cprops", "api_url": "https://rseng.github.io/software/api/repos/github/low-sky/cprops"}, {"uid": "github/EvolOMICS-TU/ETENLNC", "html_url": "https://rseng.github.io/software/repository/github/EvolOMICS-TU/ETENLNC", "api_url": "https://rseng.github.io/software/api/repos/github/EvolOMICS-TU/ETENLNC"}, {"uid": "github/kellino/DiscreteEntropy.jl", "html_url": "https://rseng.github.io/software/repository/github/kellino/DiscreteEntropy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kellino/DiscreteEntropy.jl"}, {"uid": "github/ajohnson-uoregon/llvm-project", "html_url": "https://rseng.github.io/software/repository/github/ajohnson-uoregon/llvm-project", "api_url": "https://rseng.github.io/software/api/repos/github/ajohnson-uoregon/llvm-project"}, {"uid": "github/zpliulab/GENELink", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GENELink", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GENELink"}, {"uid": "github/zpliulab/GeoBind", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GeoBind", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GeoBind"}, {"uid": "github/HofstadterTools/HofstadterTools", "html_url": "https://rseng.github.io/software/repository/github/HofstadterTools/HofstadterTools", "api_url": "https://rseng.github.io/software/api/repos/github/HofstadterTools/HofstadterTools"}, {"uid": "github/KULL-Centre/DEERpredict", "html_url": "https://rseng.github.io/software/repository/github/KULL-Centre/DEERpredict", "api_url": "https://rseng.github.io/software/api/repos/github/KULL-Centre/DEERpredict"}, {"uid": "github/alexfields/ORF-RATER", "html_url": "https://rseng.github.io/software/repository/github/alexfields/ORF-RATER", "api_url": "https://rseng.github.io/software/api/repos/github/alexfields/ORF-RATER"}, {"uid": "github/mncrowe/QGDipoles.jl", "html_url": "https://rseng.github.io/software/repository/github/mncrowe/QGDipoles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mncrowe/QGDipoles.jl"}, {"uid": "github/JakobRoche/OCSVM-Transit-Detection", "html_url": "https://rseng.github.io/software/repository/github/JakobRoche/OCSVM-Transit-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/JakobRoche/OCSVM-Transit-Detection"}, {"uid": "github/octapps/octapps", "html_url": "https://rseng.github.io/software/repository/github/octapps/octapps", "api_url": "https://rseng.github.io/software/api/repos/github/octapps/octapps"}, {"uid": "github/walaj/svaba", "html_url": "https://rseng.github.io/software/repository/github/walaj/svaba", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/svaba"}, {"uid": "github/walaj/SeqLib", "html_url": "https://rseng.github.io/software/repository/github/walaj/SeqLib", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/SeqLib"}, {"uid": "github/hsinnan75/MapCaller", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/MapCaller", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/MapCaller"}, {"uid": "github/hsinnan75/GSAlign", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/GSAlign", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/GSAlign"}, {"uid": "github/dmitryduev/penquins", "html_url": "https://rseng.github.io/software/repository/github/dmitryduev/penquins", "api_url": "https://rseng.github.io/software/api/repos/github/dmitryduev/penquins"}, {"uid": "github/leonardlab/COMET", "html_url": "https://rseng.github.io/software/repository/github/leonardlab/COMET", "api_url": "https://rseng.github.io/software/api/repos/github/leonardlab/COMET"}, {"uid": "github/Xomics/ACTIONdemonstrator_workflow", "html_url": "https://rseng.github.io/software/repository/github/Xomics/ACTIONdemonstrator_workflow", "api_url": "https://rseng.github.io/software/api/repos/github/Xomics/ACTIONdemonstrator_workflow"}, {"uid": "github/daniellefenech/SERPent", "html_url": "https://rseng.github.io/software/repository/github/daniellefenech/SERPent", "api_url": "https://rseng.github.io/software/api/repos/github/daniellefenech/SERPent"}, {"uid": "github/symmy596/SurfinPy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/SurfinPy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/SurfinPy"}, {"uid": "github/symmy596/Polypy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/Polypy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/Polypy"}, {"uid": "github/akdeniz-uzay/A-Track", "html_url": "https://rseng.github.io/software/repository/github/akdeniz-uzay/A-Track", "api_url": "https://rseng.github.io/software/api/repos/github/akdeniz-uzay/A-Track"}, {"uid": "github/RajLabMSSM/echolocatoR", "html_url": "https://rseng.github.io/software/repository/github/RajLabMSSM/echolocatoR", "api_url": "https://rseng.github.io/software/api/repos/github/RajLabMSSM/echolocatoR"}, {"uid": "github/felipeelorrieta/IAR_Model", "html_url": "https://rseng.github.io/software/repository/github/felipeelorrieta/IAR_Model", "api_url": "https://rseng.github.io/software/api/repos/github/felipeelorrieta/IAR_Model"}, {"uid": "github/cl3425/Clairvoyance", "html_url": "https://rseng.github.io/software/repository/github/cl3425/Clairvoyance", "api_url": "https://rseng.github.io/software/api/repos/github/cl3425/Clairvoyance"}, {"uid": "github/husseinaluie/FlowSieve", "html_url": "https://rseng.github.io/software/repository/github/husseinaluie/FlowSieve", "api_url": "https://rseng.github.io/software/api/repos/github/husseinaluie/FlowSieve"}, {"uid": "github/STOmics/cs-benchmark", "html_url": "https://rseng.github.io/software/repository/github/STOmics/cs-benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/cs-benchmark"}, {"uid": "github/STOmics/EAGS", "html_url": "https://rseng.github.io/software/repository/github/STOmics/EAGS", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/EAGS"}, {"uid": "github/iomega/paired-data-form", "html_url": "https://rseng.github.io/software/repository/github/iomega/paired-data-form", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/paired-data-form"}, {"uid": "github/iomega/spec2vec_gnps_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec_gnps_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec_gnps_data_analysis"}, {"uid": "github/iomega/spec2vec", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec"}, {"uid": "github/iomega/zenodo-upload", "html_url": "https://rseng.github.io/software/repository/github/iomega/zenodo-upload", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/zenodo-upload"}, {"uid": "github/EcoJulia/SimpleSDMLayers.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/SimpleSDMLayers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/SimpleSDMLayers.jl"}, {"uid": "github/EcoJulia/EcologicalNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/EcologicalNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/EcologicalNetworks.jl"}, {"uid": "github/EcoJulia/Microbiome.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/Microbiome.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/Microbiome.jl"}, {"uid": "github/sundarjhu/2-DUST", "html_url": "https://rseng.github.io/software/repository/github/sundarjhu/2-DUST", "api_url": "https://rseng.github.io/software/api/repos/github/sundarjhu/2-DUST"}, {"uid": "github/liniguez/Insplico_simulations", "html_url": "https://rseng.github.io/software/repository/github/liniguez/Insplico_simulations", "api_url": "https://rseng.github.io/software/api/repos/github/liniguez/Insplico_simulations"}, {"uid": "github/JuliaMatrices/LazyBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/LazyBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BlockBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BlockBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BandedMatrices.jl"}, {"uid": "github/elkebir-group/derna", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/derna", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/derna"}, {"uid": "github/elkebir-group/Jumper", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/Jumper", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/Jumper"}, {"uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "html_url": "https://rseng.github.io/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner"}, {"uid": "github/felixbosco/KeplerFit", "html_url": "https://rseng.github.io/software/repository/github/felixbosco/KeplerFit", "api_url": "https://rseng.github.io/software/api/repos/github/felixbosco/KeplerFit"}, {"uid": "github/LSARP/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/LSARP/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/LSARP/ProteomicsQC"}, {"uid": "github/HHTpy/HHTpywrapper", "html_url": "https://rseng.github.io/software/repository/github/HHTpy/HHTpywrapper", "api_url": "https://rseng.github.io/software/api/repos/github/HHTpy/HHTpywrapper"}, {"uid": "github/OxES/k2sc", "html_url": "https://rseng.github.io/software/repository/github/OxES/k2sc", "api_url": "https://rseng.github.io/software/api/repos/github/OxES/k2sc"}, {"uid": "github/WGLab/LongGF", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongGF", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongGF"}, {"uid": "github/WGLab/InterVar", "html_url": "https://rseng.github.io/software/repository/github/WGLab/InterVar", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/InterVar"}, {"uid": "github/WGLab/PhenoGPT2", "html_url": "https://rseng.github.io/software/repository/github/WGLab/PhenoGPT2", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/PhenoGPT2"}, {"uid": "github/WGLab/LongReadSum", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongReadSum", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongReadSum"}, {"uid": "github/YihePang/DisoFLAG", "html_url": "https://rseng.github.io/software/repository/github/YihePang/DisoFLAG", "api_url": "https://rseng.github.io/software/api/repos/github/YihePang/DisoFLAG"}, {"uid": "github/raghuastro/GRIZZLY", "html_url": "https://rseng.github.io/software/repository/github/raghuastro/GRIZZLY", "api_url": "https://rseng.github.io/software/api/repos/github/raghuastro/GRIZZLY"}, {"uid": "github/cbib/decontaminator", "html_url": "https://rseng.github.io/software/repository/github/cbib/decontaminator", "api_url": "https://rseng.github.io/software/api/repos/github/cbib/decontaminator"}, {"uid": "github/Ruiz-HCI-Lab/ggMOB", "html_url": "https://rseng.github.io/software/repository/github/Ruiz-HCI-Lab/ggMOB", "api_url": "https://rseng.github.io/software/api/repos/github/Ruiz-HCI-Lab/ggMOB"}, {"uid": "github/oliverphilcox/RascalC", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/RascalC", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/RascalC"}, {"uid": "github/oliverphilcox/OneLoopBispectrum", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/OneLoopBispectrum", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/OneLoopBispectrum"}, {"uid": "github/oliverphilcox/PolyBin", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin"}, {"uid": "github/oliverphilcox/Spectra-Without-Windows", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Spectra-Without-Windows", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Spectra-Without-Windows"}, {"uid": "github/oliverphilcox/EffectiveHalos", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/EffectiveHalos", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/EffectiveHalos"}, {"uid": "github/oliverphilcox/Keplers-Goat-Herd", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Keplers-Goat-Herd", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Keplers-Goat-Herd"}, {"uid": "github/oliverphilcox/PolyBin3D", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin3D", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin3D"}, {"uid": "github/oliverphilcox/HIPSTER", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HIPSTER", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HIPSTER"}, {"uid": "github/oliverphilcox/HADES", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HADES", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HADES"}, {"uid": "github/oliverphilcox/encore", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/encore", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/encore"}, {"uid": "github/carlodev/SegregatedVMSSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SegregatedVMSSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SegregatedVMSSolver.jl"}, {"uid": "github/carlodev/SyntheticEddyMethod.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SyntheticEddyMethod.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SyntheticEddyMethod.jl"}, {"uid": "github/bwengals/CCSNMultivar", "html_url": "https://rseng.github.io/software/repository/github/bwengals/CCSNMultivar", "api_url": "https://rseng.github.io/software/api/repos/github/bwengals/CCSNMultivar"}, {"uid": "github/LinkedEarth/pylipd", "html_url": "https://rseng.github.io/software/repository/github/LinkedEarth/pylipd", "api_url": "https://rseng.github.io/software/api/repos/github/LinkedEarth/pylipd"}, {"uid": "github/EvolBioInf/phylonium", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/phylonium", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/phylonium"}, {"uid": "github/EvolBioInf/andi", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/andi", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/andi"}, {"uid": "github/combine-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/combine-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/combine-lab/salmon"}, {"uid": "github/tomlouden/spiderman", "html_url": "https://rseng.github.io/software/repository/github/tomlouden/spiderman", "api_url": "https://rseng.github.io/software/api/repos/github/tomlouden/spiderman"}, {"uid": "github/madupite/madupite", "html_url": "https://rseng.github.io/software/repository/github/madupite/madupite", "api_url": "https://rseng.github.io/software/api/repos/github/madupite/madupite"}, {"uid": "github/nell-byler/cloudyfsps", "html_url": "https://rseng.github.io/software/repository/github/nell-byler/cloudyfsps", "api_url": "https://rseng.github.io/software/api/repos/github/nell-byler/cloudyfsps"}, {"uid": "github/donaldRwilliams/GGMnonreg", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/GGMnonreg", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/GGMnonreg"}, {"uid": "github/donaldRwilliams/BGGM", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/BGGM", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/BGGM"}, {"uid": "github/meantrix/corrp", "html_url": "https://rseng.github.io/software/repository/github/meantrix/corrp", "api_url": "https://rseng.github.io/software/api/repos/github/meantrix/corrp"}, {"uid": "github/silkemaes/MACE", "html_url": "https://rseng.github.io/software/repository/github/silkemaes/MACE", "api_url": "https://rseng.github.io/software/api/repos/github/silkemaes/MACE"}, {"uid": "github/fcs-analysis/PyScanFCS", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyScanFCS", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyScanFCS"}, {"uid": "github/fcs-analysis/PyCorrFit", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyCorrFit", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyCorrFit"}, {"uid": "github/SJaffa/Jplots", "html_url": "https://rseng.github.io/software/repository/github/SJaffa/Jplots", "api_url": "https://rseng.github.io/software/api/repos/github/SJaffa/Jplots"}, {"uid": "github/hillerlab/GenomeAlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/hillerlab/GenomeAlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/hillerlab/GenomeAlignmentTools"}, {"uid": "github/ropensci-org/roblog", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/roblog", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/roblog"}, {"uid": "github/ropensci-org/pkgreviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/pkgreviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/pkgreviewr"}, {"uid": "github/ropensci-org/rotemplate", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/rotemplate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/rotemplate"}, {"uid": "github/trinotate/trinotatehub.io", "html_url": "https://rseng.github.io/software/repository/github/trinotate/trinotatehub.io", "api_url": "https://rseng.github.io/software/api/repos/github/trinotate/trinotatehub.io"}, {"uid": "github/atzberg/mlmod", "html_url": "https://rseng.github.io/software/repository/github/atzberg/mlmod", "api_url": "https://rseng.github.io/software/api/repos/github/atzberg/mlmod"}, {"uid": "github/kyleaoman/martini", "html_url": "https://rseng.github.io/software/repository/github/kyleaoman/martini", "api_url": "https://rseng.github.io/software/api/repos/github/kyleaoman/martini"}, {"uid": "github/EGaraldi/corecon", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/corecon", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/corecon"}, {"uid": "github/EGaraldi/ZInCo", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/ZInCo", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/ZInCo"}, {"uid": "github/mdsufz/MuDoGeR", "html_url": "https://rseng.github.io/software/repository/github/mdsufz/MuDoGeR", "api_url": "https://rseng.github.io/software/api/repos/github/mdsufz/MuDoGeR"}, {"uid": "github/fizban007/Aperture4", "html_url": "https://rseng.github.io/software/repository/github/fizban007/Aperture4", "api_url": "https://rseng.github.io/software/api/repos/github/fizban007/Aperture4"}, {"uid": "github/dblaschke-LANL/PyDislocDyn", "html_url": "https://rseng.github.io/software/repository/github/dblaschke-LANL/PyDislocDyn", "api_url": "https://rseng.github.io/software/api/repos/github/dblaschke-LANL/PyDislocDyn"}, {"uid": "github/ronnyerrmann/HiFLEx", "html_url": "https://rseng.github.io/software/repository/github/ronnyerrmann/HiFLEx", "api_url": "https://rseng.github.io/software/api/repos/github/ronnyerrmann/HiFLEx"}, {"uid": "github/Kaixhin/Autoencoders", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Autoencoders", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Autoencoders"}, {"uid": "github/Kaixhin/spinning-up-basic", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/spinning-up-basic", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/spinning-up-basic"}, {"uid": "github/Kaixhin/dockerfiles", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/dockerfiles", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/dockerfiles"}, {"uid": "github/Kaixhin/FGLab", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGLab", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGLab"}, {"uid": "github/Kaixhin/Atari", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Atari", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Atari"}, {"uid": "github/Kaixhin/Rainbow", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Rainbow", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Rainbow"}, {"uid": "github/Kaixhin/FGMachine", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGMachine", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGMachine"}, {"uid": "github/Kaixhin/PlaNet", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/PlaNet", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/PlaNet"}, {"uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "html_url": "https://rseng.github.io/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "api_url": "https://rseng.github.io/software/api/repos/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids"}, {"uid": "github/gem-pasteur/Integron_Finder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/Integron_Finder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/Integron_Finder"}, {"uid": "github/gem-pasteur/macsylib", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsylib", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsylib"}, {"uid": "github/gem-pasteur/macsyfinder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsyfinder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsyfinder"}, {"uid": "github/kiyo-masui/bitshuffle", "html_url": "https://rseng.github.io/software/repository/github/kiyo-masui/bitshuffle", "api_url": "https://rseng.github.io/software/api/repos/github/kiyo-masui/bitshuffle"}, {"uid": "github/jfwallin/JSPAM", "html_url": "https://rseng.github.io/software/repository/github/jfwallin/JSPAM", "api_url": "https://rseng.github.io/software/api/repos/github/jfwallin/JSPAM"}, {"uid": "github/NGSolve/ngsPETSc", "html_url": "https://rseng.github.io/software/repository/github/NGSolve/ngsPETSc", "api_url": "https://rseng.github.io/software/api/repos/github/NGSolve/ngsPETSc"}, {"uid": "github/yuhaoran/CUBE", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE"}, {"uid": "github/blebon/directChillFoam", "html_url": "https://rseng.github.io/software/repository/github/blebon/directChillFoam", "api_url": "https://rseng.github.io/software/api/repos/github/blebon/directChillFoam"}, {"uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefmath/SurfaceWaterIntegratedModeling.jl"}, {"uid": "github/Hegghammer/daiR", "html_url": "https://rseng.github.io/software/repository/github/Hegghammer/daiR", "api_url": "https://rseng.github.io/software/api/repos/github/Hegghammer/daiR"}, {"uid": "github/Martin-Fahrenberger/GTestimate", "html_url": "https://rseng.github.io/software/repository/github/Martin-Fahrenberger/GTestimate", "api_url": "https://rseng.github.io/software/api/repos/github/Martin-Fahrenberger/GTestimate"}, {"uid": "github/EigenDev/simbi", "html_url": "https://rseng.github.io/software/repository/github/EigenDev/simbi", "api_url": "https://rseng.github.io/software/api/repos/github/EigenDev/simbi"}, {"uid": "github/Sheng-Qi-Yang/HIILines", "html_url": "https://rseng.github.io/software/repository/github/Sheng-Qi-Yang/HIILines", "api_url": "https://rseng.github.io/software/api/repos/github/Sheng-Qi-Yang/HIILines"}, {"uid": "github/chainsawriot/sweater", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/sweater", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/sweater"}, {"uid": "github/chainsawriot/oolong", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/oolong", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/oolong"}, {"uid": "github/threeML/threeML", "html_url": "https://rseng.github.io/software/repository/github/threeML/threeML", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/threeML"}, {"uid": "github/threeML/astromodels", "html_url": "https://rseng.github.io/software/repository/github/threeML/astromodels", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/astromodels"}, {"uid": "github/jakevdp/wpca", "html_url": "https://rseng.github.io/software/repository/github/jakevdp/wpca", "api_url": "https://rseng.github.io/software/api/repos/github/jakevdp/wpca"}, {"uid": "github/exomishra/kobe", "html_url": "https://rseng.github.io/software/repository/github/exomishra/kobe", "api_url": "https://rseng.github.io/software/api/repos/github/exomishra/kobe"}, {"uid": "github/johnveitch/cpnest", "html_url": "https://rseng.github.io/software/repository/github/johnveitch/cpnest", "api_url": "https://rseng.github.io/software/api/repos/github/johnveitch/cpnest"}, {"uid": "github/NBISweden/AGAT", "html_url": "https://rseng.github.io/software/repository/github/NBISweden/AGAT", "api_url": "https://rseng.github.io/software/api/repos/github/NBISweden/AGAT"}, {"uid": "github/GabrielaCR/AGNfitter", "html_url": "https://rseng.github.io/software/repository/github/GabrielaCR/AGNfitter", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielaCR/AGNfitter"}, {"uid": "github/sstadick/perbase", "html_url": "https://rseng.github.io/software/repository/github/sstadick/perbase", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/perbase"}, {"uid": "github/sstadick/crabz", "html_url": "https://rseng.github.io/software/repository/github/sstadick/crabz", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/crabz"}, {"uid": "github/bhhua/vacuumtunneling", "html_url": "https://rseng.github.io/software/repository/github/bhhua/vacuumtunneling", "api_url": "https://rseng.github.io/software/api/repos/github/bhhua/vacuumtunneling"}, {"uid": "github/caseyjlaw/tpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/tpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/tpipe"}, {"uid": "github/caseyjlaw/rtpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/rtpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/rtpipe"}, {"uid": "github/sbmlteam/moccasin", "html_url": "https://rseng.github.io/software/repository/github/sbmlteam/moccasin", "api_url": "https://rseng.github.io/software/api/repos/github/sbmlteam/moccasin"}, {"uid": "github/pierrepeterlongo/back_to_sequences", "html_url": "https://rseng.github.io/software/repository/github/pierrepeterlongo/back_to_sequences", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepeterlongo/back_to_sequences"}, {"uid": "github/MaudeDavidLab/GMEmbeddings", "html_url": "https://rseng.github.io/software/repository/github/MaudeDavidLab/GMEmbeddings", "api_url": "https://rseng.github.io/software/api/repos/github/MaudeDavidLab/GMEmbeddings"}, {"uid": "github/everval/LongMemory.jl", "html_url": "https://rseng.github.io/software/repository/github/everval/LongMemory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/everval/LongMemory.jl"}, {"uid": "github/EhsanGharibNezhad/TelescopeML", "html_url": "https://rseng.github.io/software/repository/github/EhsanGharibNezhad/TelescopeML", "api_url": "https://rseng.github.io/software/api/repos/github/EhsanGharibNezhad/TelescopeML"}, {"uid": "github/TRASAL/psrdada-python", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/psrdada-python", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/psrdada-python"}, {"uid": "github/TRASAL/AMBER", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/AMBER"}, {"uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/ETHOS_PeNALPS"}, {"uid": "github/FZJ-IEK3-VSA/FINE", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/FINE", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/FINE"}, {"uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/LoadProfileGenerator"}, {"uid": "github/sczesla/PyAstronomy", "html_url": "https://rseng.github.io/software/repository/github/sczesla/PyAstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sczesla/PyAstronomy"}, {"uid": "github/cblakeastro/intensitypower", "html_url": "https://rseng.github.io/software/repository/github/cblakeastro/intensitypower", "api_url": "https://rseng.github.io/software/api/repos/github/cblakeastro/intensitypower"}, {"uid": "github/vterron/lemon", "html_url": "https://rseng.github.io/software/repository/github/vterron/lemon", "api_url": "https://rseng.github.io/software/api/repos/github/vterron/lemon"}, {"uid": "github/isaackd/wcloud", "html_url": "https://rseng.github.io/software/repository/github/isaackd/wcloud", "api_url": "https://rseng.github.io/software/api/repos/github/isaackd/wcloud"}, {"uid": "github/pacificbiosciences/bam2fastx", "html_url": "https://rseng.github.io/software/repository/github/pacificbiosciences/bam2fastx", "api_url": "https://rseng.github.io/software/api/repos/github/pacificbiosciences/bam2fastx"}, {"uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/cookiecutter-cdp-deployment"}, {"uid": "github/CouncilDataProject/speakerbox", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/speakerbox", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/speakerbox"}, {"uid": "github/phenology/cgc", "html_url": "https://rseng.github.io/software/repository/github/phenology/cgc", "api_url": "https://rseng.github.io/software/api/repos/github/phenology/cgc"}, {"uid": "github/NREL/G2Aero", "html_url": "https://rseng.github.io/software/repository/github/NREL/G2Aero", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/G2Aero"}, {"uid": "github/NREL/VirtualEngineering", "html_url": "https://rseng.github.io/software/repository/github/NREL/VirtualEngineering", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/VirtualEngineering"}, {"uid": "github/NREL/graph-env", "html_url": "https://rseng.github.io/software/repository/github/NREL/graph-env", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/graph-env"}, {"uid": "github/NREL/OpenOA", "html_url": "https://rseng.github.io/software/repository/github/NREL/OpenOA", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/OpenOA"}, {"uid": "github/epic-astronomy/EPIC", "html_url": "https://rseng.github.io/software/repository/github/epic-astronomy/EPIC", "api_url": "https://rseng.github.io/software/api/repos/github/epic-astronomy/EPIC"}, {"uid": "github/BodeTobias/AutoPDEx", "html_url": "https://rseng.github.io/software/repository/github/BodeTobias/AutoPDEx", "api_url": "https://rseng.github.io/software/api/repos/github/BodeTobias/AutoPDEx"}, {"uid": "github/m2aia/m2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/m2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/m2aia"}, {"uid": "github/m2aia/pym2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/pym2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/pym2aia"}, {"uid": "github/AshleySpindler/AstroVaDEr-Public", "html_url": "https://rseng.github.io/software/repository/github/AshleySpindler/AstroVaDEr-Public", "api_url": "https://rseng.github.io/software/api/repos/github/AshleySpindler/AstroVaDEr-Public"}, {"uid": "github/mlares/hearsay", "html_url": "https://rseng.github.io/software/repository/github/mlares/hearsay", "api_url": "https://rseng.github.io/software/api/repos/github/mlares/hearsay"}, {"uid": "github/MesquiteProject/MesquiteCore", "html_url": "https://rseng.github.io/software/repository/github/MesquiteProject/MesquiteCore", "api_url": "https://rseng.github.io/software/api/repos/github/MesquiteProject/MesquiteCore"}, {"uid": "github/andreasmang/claire", "html_url": "https://rseng.github.io/software/repository/github/andreasmang/claire", "api_url": "https://rseng.github.io/software/api/repos/github/andreasmang/claire"}, {"uid": "github/lys-devel/lys", "html_url": "https://rseng.github.io/software/repository/github/lys-devel/lys", "api_url": "https://rseng.github.io/software/api/repos/github/lys-devel/lys"}, {"uid": "github/bharathramh/STRIDE-DB_Codes", "html_url": "https://rseng.github.io/software/repository/github/bharathramh/STRIDE-DB_Codes", "api_url": "https://rseng.github.io/software/api/repos/github/bharathramh/STRIDE-DB_Codes"}, {"uid": "github/s4hts/HTStream", "html_url": "https://rseng.github.io/software/repository/github/s4hts/HTStream", "api_url": "https://rseng.github.io/software/api/repos/github/s4hts/HTStream"}, {"uid": "github/NCIP/visda", "html_url": "https://rseng.github.io/software/repository/github/NCIP/visda", "api_url": "https://rseng.github.io/software/api/repos/github/NCIP/visda"}, {"uid": "github/herrsalmi/FConverter", "html_url": "https://rseng.github.io/software/repository/github/herrsalmi/FConverter", "api_url": "https://rseng.github.io/software/api/repos/github/herrsalmi/FConverter"}, {"uid": "github/andresmegias/gildas-class-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/gildas-class-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/gildas-class-python"}, {"uid": "github/andresmegias/richvalues", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/richvalues", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/richvalues"}, {"uid": "github/andresmegias/radex-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/radex-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/radex-python"}, {"uid": "github/DReichLab/EIG", "html_url": "https://rseng.github.io/software/repository/github/DReichLab/EIG", "api_url": "https://rseng.github.io/software/api/repos/github/DReichLab/EIG"}, {"uid": "github/TARGENE/TMLE.jl", "html_url": "https://rseng.github.io/software/repository/github/TARGENE/TMLE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TARGENE/TMLE.jl"}, {"uid": "github/tlambert03/pycudadecon", "html_url": "https://rseng.github.io/software/repository/github/tlambert03/pycudadecon", "api_url": "https://rseng.github.io/software/api/repos/github/tlambert03/pycudadecon"}, {"uid": "github/inonchiu/ComEst", "html_url": "https://rseng.github.io/software/repository/github/inonchiu/ComEst", "api_url": "https://rseng.github.io/software/api/repos/github/inonchiu/ComEst"}, {"uid": "github/Collab4exaNBody/exaDEM", "html_url": "https://rseng.github.io/software/repository/github/Collab4exaNBody/exaDEM", "api_url": "https://rseng.github.io/software/api/repos/github/Collab4exaNBody/exaDEM"}, {"uid": "github/cosmo-sims/DISCO-DJ", "html_url": "https://rseng.github.io/software/repository/github/cosmo-sims/DISCO-DJ", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-sims/DISCO-DJ"}, {"uid": "github/raufs/skDER", "html_url": "https://rseng.github.io/software/repository/github/raufs/skDER", "api_url": "https://rseng.github.io/software/api/repos/github/raufs/skDER"}, {"uid": "github/ArnaudCassan/microlensing", "html_url": "https://rseng.github.io/software/repository/github/ArnaudCassan/microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/ArnaudCassan/microlensing"}, {"uid": "github/shirtsgroup/physical_validation", "html_url": "https://rseng.github.io/software/repository/github/shirtsgroup/physical_validation", "api_url": "https://rseng.github.io/software/api/repos/github/shirtsgroup/physical_validation"}, {"uid": "github/yesint/EnCurv", "html_url": "https://rseng.github.io/software/repository/github/yesint/EnCurv", "api_url": "https://rseng.github.io/software/api/repos/github/yesint/EnCurv"}, {"uid": "github/inducer/modepy", "html_url": "https://rseng.github.io/software/repository/github/inducer/modepy", "api_url": "https://rseng.github.io/software/api/repos/github/inducer/modepy"}, {"uid": "github/genomehubs/goat-cli", "html_url": "https://rseng.github.io/software/repository/github/genomehubs/goat-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genomehubs/goat-cli"}, {"uid": "github/hajimes/mmh3", "html_url": "https://rseng.github.io/software/repository/github/hajimes/mmh3", "api_url": "https://rseng.github.io/software/api/repos/github/hajimes/mmh3"}, {"uid": "github/jumphone/inferloop", "html_url": "https://rseng.github.io/software/repository/github/jumphone/inferloop", "api_url": "https://rseng.github.io/software/api/repos/github/jumphone/inferloop"}, {"uid": "github/Heldenkombinat/Logodetect", "html_url": "https://rseng.github.io/software/repository/github/Heldenkombinat/Logodetect", "api_url": "https://rseng.github.io/software/api/repos/github/Heldenkombinat/Logodetect"}, {"uid": "github/tidymess-code/tidymess", "html_url": "https://rseng.github.io/software/repository/github/tidymess-code/tidymess", "api_url": "https://rseng.github.io/software/api/repos/github/tidymess-code/tidymess"}, {"uid": "github/fforster/delight", "html_url": "https://rseng.github.io/software/repository/github/fforster/delight", "api_url": "https://rseng.github.io/software/api/repos/github/fforster/delight"}, {"uid": "github/cython/cython", "html_url": "https://rseng.github.io/software/repository/github/cython/cython", "api_url": "https://rseng.github.io/software/api/repos/github/cython/cython"}, {"uid": "github/mongibellili/QuantizedSystemSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/mongibellili/QuantizedSystemSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mongibellili/QuantizedSystemSolver.jl"}, {"uid": "github/maximewack/viroCapt", "html_url": "https://rseng.github.io/software/repository/github/maximewack/viroCapt", "api_url": "https://rseng.github.io/software/api/repos/github/maximewack/viroCapt"}, {"uid": "github/pachterlab/kb_python", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kb_python", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kb_python"}, {"uid": "github/pachterlab/kallisto", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kallisto"}, {"uid": "github/bramvandijk88/cacatoo", "html_url": "https://rseng.github.io/software/repository/github/bramvandijk88/cacatoo", "api_url": "https://rseng.github.io/software/api/repos/github/bramvandijk88/cacatoo"}, {"uid": "github/UrbanRuralSystems/ur-scape", "html_url": "https://rseng.github.io/software/repository/github/UrbanRuralSystems/ur-scape", "api_url": "https://rseng.github.io/software/api/repos/github/UrbanRuralSystems/ur-scape"}, {"uid": "github/leesulab/arcMS", "html_url": "https://rseng.github.io/software/repository/github/leesulab/arcMS", "api_url": "https://rseng.github.io/software/api/repos/github/leesulab/arcMS"}, {"uid": "github/kjschmidlab/GGoutlieR", "html_url": "https://rseng.github.io/software/repository/github/kjschmidlab/GGoutlieR", "api_url": "https://rseng.github.io/software/api/repos/github/kjschmidlab/GGoutlieR"}, {"uid": "github/hotokezaka/HeatingRate", "html_url": "https://rseng.github.io/software/repository/github/hotokezaka/HeatingRate", "api_url": "https://rseng.github.io/software/api/repos/github/hotokezaka/HeatingRate"}, {"uid": "github/saezlab/PHONEMeS", "html_url": "https://rseng.github.io/software/repository/github/saezlab/PHONEMeS", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/PHONEMeS"}, {"uid": "github/saezlab/liana-py", "html_url": "https://rseng.github.io/software/repository/github/saezlab/liana-py", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/liana-py"}, {"uid": "github/mzkhalid039/DWBuilder", "html_url": "https://rseng.github.io/software/repository/github/mzkhalid039/DWBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/mzkhalid039/DWBuilder"}, {"uid": "github/MichaelSel/edoJS", "html_url": "https://rseng.github.io/software/repository/github/MichaelSel/edoJS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelSel/edoJS"}, {"uid": "github/CrowdTruth/CrowdTruth", "html_url": "https://rseng.github.io/software/repository/github/CrowdTruth/CrowdTruth", "api_url": "https://rseng.github.io/software/api/repos/github/CrowdTruth/CrowdTruth"}, {"uid": "github/muzafferarikan/gNOMO2", "html_url": "https://rseng.github.io/software/repository/github/muzafferarikan/gNOMO2", "api_url": "https://rseng.github.io/software/api/repos/github/muzafferarikan/gNOMO2"}, {"uid": "github/ecological-cities/home2park", "html_url": "https://rseng.github.io/software/repository/github/ecological-cities/home2park", "api_url": "https://rseng.github.io/software/api/repos/github/ecological-cities/home2park"}, {"uid": "github/EdgeVPNio/evio", "html_url": "https://rseng.github.io/software/repository/github/EdgeVPNio/evio", "api_url": "https://rseng.github.io/software/api/repos/github/EdgeVPNio/evio"}, {"uid": "github/rkkuang/triplelens", "html_url": "https://rseng.github.io/software/repository/github/rkkuang/triplelens", "api_url": "https://rseng.github.io/software/api/repos/github/rkkuang/triplelens"}, {"uid": "github/kblin/ncbi-acc-download", "html_url": "https://rseng.github.io/software/repository/github/kblin/ncbi-acc-download", "api_url": "https://rseng.github.io/software/api/repos/github/kblin/ncbi-acc-download"}, {"uid": "github/joshjchayes/TransitFit", "html_url": "https://rseng.github.io/software/repository/github/joshjchayes/TransitFit", "api_url": "https://rseng.github.io/software/api/repos/github/joshjchayes/TransitFit"}, {"uid": "github/JesusTorrado/extrapops", "html_url": "https://rseng.github.io/software/repository/github/JesusTorrado/extrapops", "api_url": "https://rseng.github.io/software/api/repos/github/JesusTorrado/extrapops"}, {"uid": "github/seshnadathur/Revolver", "html_url": "https://rseng.github.io/software/repository/github/seshnadathur/Revolver", "api_url": "https://rseng.github.io/software/api/repos/github/seshnadathur/Revolver"}, {"uid": "github/conchoecia/pauvre", "html_url": "https://rseng.github.io/software/repository/github/conchoecia/pauvre", "api_url": "https://rseng.github.io/software/api/repos/github/conchoecia/pauvre"}, {"uid": "github/MrMinimal64/multivar_horner", "html_url": "https://rseng.github.io/software/repository/github/MrMinimal64/multivar_horner", "api_url": "https://rseng.github.io/software/api/repos/github/MrMinimal64/multivar_horner"}, {"uid": "github/zhouzilu/DENDRO", "html_url": "https://rseng.github.io/software/repository/github/zhouzilu/DENDRO", "api_url": "https://rseng.github.io/software/api/repos/github/zhouzilu/DENDRO"}, {"uid": "github/QuantumPlasma/SFQEDtoolkit", "html_url": "https://rseng.github.io/software/repository/github/QuantumPlasma/SFQEDtoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/QuantumPlasma/SFQEDtoolkit"}, {"uid": "github/stemangiola/tidyHeatmap", "html_url": "https://rseng.github.io/software/repository/github/stemangiola/tidyHeatmap", "api_url": "https://rseng.github.io/software/api/repos/github/stemangiola/tidyHeatmap"}, {"uid": "github/chhylp123/hifiasm", "html_url": "https://rseng.github.io/software/repository/github/chhylp123/hifiasm", "api_url": "https://rseng.github.io/software/api/repos/github/chhylp123/hifiasm"}, {"uid": "github/SandoghdarLab/PiSCAT", "html_url": "https://rseng.github.io/software/repository/github/SandoghdarLab/PiSCAT", "api_url": "https://rseng.github.io/software/api/repos/github/SandoghdarLab/PiSCAT"}, {"uid": "github/mildpiggy/DEP2", "html_url": "https://rseng.github.io/software/repository/github/mildpiggy/DEP2", "api_url": "https://rseng.github.io/software/api/repos/github/mildpiggy/DEP2"}, {"uid": "github/domenico-simone/rmlst_api", "html_url": "https://rseng.github.io/software/repository/github/domenico-simone/rmlst_api", "api_url": "https://rseng.github.io/software/api/repos/github/domenico-simone/rmlst_api"}, {"uid": "github/DeepRegNet/DeepReg", "html_url": "https://rseng.github.io/software/repository/github/DeepRegNet/DeepReg", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRegNet/DeepReg"}, {"uid": "github/shenwei356/LexicMap", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/LexicMap", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/LexicMap"}, {"uid": "github/shenwei356/kmcp", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/kmcp", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/kmcp"}, {"uid": "github/shenwei356/seqkit", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/seqkit", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/seqkit"}, {"uid": "github/shenwei356/csvtk", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/csvtk", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/csvtk"}, {"uid": "github/shenwei356/unikmer", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/unikmer", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/unikmer"}, {"uid": "github/radio1988/OneStopRNAseq", "html_url": "https://rseng.github.io/software/repository/github/radio1988/OneStopRNAseq", "api_url": "https://rseng.github.io/software/api/repos/github/radio1988/OneStopRNAseq"}, {"uid": "github/davidpagnon/Sports2D", "html_url": "https://rseng.github.io/software/repository/github/davidpagnon/Sports2D", "api_url": "https://rseng.github.io/software/api/repos/github/davidpagnon/Sports2D"}, {"uid": "github/1054/Crab.Toolkit.michi2", "html_url": "https://rseng.github.io/software/repository/github/1054/Crab.Toolkit.michi2", "api_url": "https://rseng.github.io/software/api/repos/github/1054/Crab.Toolkit.michi2"}, {"uid": "github/MingBit/PySCNet", "html_url": "https://rseng.github.io/software/repository/github/MingBit/PySCNet", "api_url": "https://rseng.github.io/software/api/repos/github/MingBit/PySCNet"}, {"uid": "github/trchudley/pdemtools", "html_url": "https://rseng.github.io/software/repository/github/trchudley/pdemtools", "api_url": "https://rseng.github.io/software/api/repos/github/trchudley/pdemtools"}, {"uid": "github/nedRad88/SCALAR", "html_url": "https://rseng.github.io/software/repository/github/nedRad88/SCALAR", "api_url": "https://rseng.github.io/software/api/repos/github/nedRad88/SCALAR"}, {"uid": "github/hongli-ma/RNANetMotif", "html_url": "https://rseng.github.io/software/repository/github/hongli-ma/RNANetMotif", "api_url": "https://rseng.github.io/software/api/repos/github/hongli-ma/RNANetMotif"}, {"uid": "github/Jashcraf/katsu", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/katsu", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/katsu"}, {"uid": "github/Jashcraf/poke", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/poke", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/poke"}, {"uid": "github/aris-mav/NMRInversions.jl", "html_url": "https://rseng.github.io/software/repository/github/aris-mav/NMRInversions.jl", "api_url": "https://rseng.github.io/software/api/repos/github/aris-mav/NMRInversions.jl"}, {"uid": "github/xenon-middleware/xenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/xenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/xenon"}, {"uid": "github/xenon-middleware/pyxenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/pyxenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/pyxenon"}, {"uid": "github/cosmostat/nicaea", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/nicaea", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/nicaea"}, {"uid": "github/cosmostat/CosmoPMC", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/CosmoPMC", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/CosmoPMC"}, {"uid": "github/cosmostat/pmclib", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/pmclib", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/pmclib"}, {"uid": "github/arumugamlab/msamtools", "html_url": "https://rseng.github.io/software/repository/github/arumugamlab/msamtools", "api_url": "https://rseng.github.io/software/api/repos/github/arumugamlab/msamtools"}, {"uid": "github/cvs-health/langfair", "html_url": "https://rseng.github.io/software/repository/github/cvs-health/langfair", "api_url": "https://rseng.github.io/software/api/repos/github/cvs-health/langfair"}, {"uid": "github/EISy-as-Py/hardy", "html_url": "https://rseng.github.io/software/repository/github/EISy-as-Py/hardy", "api_url": "https://rseng.github.io/software/api/repos/github/EISy-as-Py/hardy"}, {"uid": "github/madysonb/EVA", "html_url": "https://rseng.github.io/software/repository/github/madysonb/EVA", "api_url": "https://rseng.github.io/software/api/repos/github/madysonb/EVA"}, {"uid": "github/tlverse/hal9001", "html_url": "https://rseng.github.io/software/repository/github/tlverse/hal9001", "api_url": "https://rseng.github.io/software/api/repos/github/tlverse/hal9001"}, {"uid": "github/yongsukyee/uncertain_blackholemass", "html_url": "https://rseng.github.io/software/repository/github/yongsukyee/uncertain_blackholemass", "api_url": "https://rseng.github.io/software/api/repos/github/yongsukyee/uncertain_blackholemass"}, {"uid": "github/pyplati/platipy", "html_url": "https://rseng.github.io/software/repository/github/pyplati/platipy", "api_url": "https://rseng.github.io/software/api/repos/github/pyplati/platipy"}, {"uid": "github/theLongLab/CATE", "html_url": "https://rseng.github.io/software/repository/github/theLongLab/CATE", "api_url": "https://rseng.github.io/software/api/repos/github/theLongLab/CATE"}, {"uid": "github/exoml/plan-net", "html_url": "https://rseng.github.io/software/repository/github/exoml/plan-net", "api_url": "https://rseng.github.io/software/api/repos/github/exoml/plan-net"}, {"uid": "github/xCDAT/xcdat", "html_url": "https://rseng.github.io/software/repository/github/xCDAT/xcdat", "api_url": "https://rseng.github.io/software/api/repos/github/xCDAT/xcdat"}, {"uid": "github/jkbonfield/io_lib", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/io_lib", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/io_lib"}, {"uid": "github/jkbonfield/crumble", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/crumble", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/crumble"}, {"uid": "github/jkbonfield/htscodecs", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/htscodecs", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/htscodecs"}, {"uid": "github/dsavransky/EXOSIMS", "html_url": "https://rseng.github.io/software/repository/github/dsavransky/EXOSIMS", "api_url": "https://rseng.github.io/software/api/repos/github/dsavransky/EXOSIMS"}, {"uid": "github/hydroframe/hf_hydrodata", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/hf_hydrodata", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/hf_hydrodata"}, {"uid": "github/hydroframe/subsettools", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/subsettools", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/subsettools"}, {"uid": "github/jorisparet/partycls", "html_url": "https://rseng.github.io/software/repository/github/jorisparet/partycls", "api_url": "https://rseng.github.io/software/api/repos/github/jorisparet/partycls"}, {"uid": "github/ajosephy/Clustering", "html_url": "https://rseng.github.io/software/repository/github/ajosephy/Clustering", "api_url": "https://rseng.github.io/software/api/repos/github/ajosephy/Clustering"}, {"uid": "github/dianna-ai/dianna", "html_url": "https://rseng.github.io/software/repository/github/dianna-ai/dianna", "api_url": "https://rseng.github.io/software/api/repos/github/dianna-ai/dianna"}, {"uid": "github/CoolWorlds/exoinformatics", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/exoinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/exoinformatics"}, {"uid": "github/CoolWorlds/ExoPriors", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/ExoPriors", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/ExoPriors"}, {"uid": "github/BirkhoffG/jax-relax", "html_url": "https://rseng.github.io/software/repository/github/BirkhoffG/jax-relax", "api_url": "https://rseng.github.io/software/api/repos/github/BirkhoffG/jax-relax"}, {"uid": "github/exoclam/gaspery", "html_url": "https://rseng.github.io/software/repository/github/exoclam/gaspery", "api_url": "https://rseng.github.io/software/api/repos/github/exoclam/gaspery"}, {"uid": "github/Mulan-94/smops", "html_url": "https://rseng.github.io/software/repository/github/Mulan-94/smops", "api_url": "https://rseng.github.io/software/api/repos/github/Mulan-94/smops"}, {"uid": "github/rgmyr/corebreakout", "html_url": "https://rseng.github.io/software/repository/github/rgmyr/corebreakout", "api_url": "https://rseng.github.io/software/api/repos/github/rgmyr/corebreakout"}, {"uid": "github/mikaelLEROY/AxionNS_RayTracing", "html_url": "https://rseng.github.io/software/repository/github/mikaelLEROY/AxionNS_RayTracing", "api_url": "https://rseng.github.io/software/api/repos/github/mikaelLEROY/AxionNS_RayTracing"}, {"uid": "github/desmid/mview", "html_url": "https://rseng.github.io/software/repository/github/desmid/mview", "api_url": "https://rseng.github.io/software/api/repos/github/desmid/mview"}, {"uid": "github/matchms/matchms", "html_url": "https://rseng.github.io/software/repository/github/matchms/matchms", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/matchms"}, {"uid": "github/matchms/ms2deepscore", "html_url": "https://rseng.github.io/software/repository/github/matchms/ms2deepscore", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/ms2deepscore"}, {"uid": "github/hasindu2008/slow5tools", "html_url": "https://rseng.github.io/software/repository/github/hasindu2008/slow5tools", "api_url": "https://rseng.github.io/software/api/repos/github/hasindu2008/slow5tools"}, {"uid": "github/ryanoelkers/DIA", "html_url": "https://rseng.github.io/software/repository/github/ryanoelkers/DIA", "api_url": "https://rseng.github.io/software/api/repos/github/ryanoelkers/DIA"}, {"uid": "github/chapmanb/bcbb", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbb", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbb"}, {"uid": "github/chapmanb/bcbio.variation", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.variation", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.variation"}, {"uid": "github/chapmanb/bcbio.prioritize", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.prioritize", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.prioritize"}, {"uid": "github/ORNL/tx2", "html_url": "https://rseng.github.io/software/repository/github/ORNL/tx2", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/tx2"}, {"uid": "github/ORNL/icat", "html_url": "https://rseng.github.io/software/repository/github/ORNL/icat", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/icat"}, {"uid": "github/ORNL/Equilipy", "html_url": "https://rseng.github.io/software/repository/github/ORNL/Equilipy", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/Equilipy"}, {"uid": "github/ORNL/curifactory", "html_url": "https://rseng.github.io/software/repository/github/ORNL/curifactory", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/curifactory"}, {"uid": "github/ORNL/AdditiveFOAM", "html_url": "https://rseng.github.io/software/repository/github/ORNL/AdditiveFOAM", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/AdditiveFOAM"}, {"uid": "github/xpsi-group/neost", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/neost", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/neost"}, {"uid": "github/xpsi-group/xpsi", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/xpsi", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/xpsi"}, {"uid": "github/aimalz/qp", "html_url": "https://rseng.github.io/software/repository/github/aimalz/qp", "api_url": "https://rseng.github.io/software/api/repos/github/aimalz/qp"}, {"uid": "github/meerklass/MeerFish", "html_url": "https://rseng.github.io/software/repository/github/meerklass/MeerFish", "api_url": "https://rseng.github.io/software/api/repos/github/meerklass/MeerFish"}, {"uid": "github/jmiramont/mcsm-benchs", "html_url": "https://rseng.github.io/software/repository/github/jmiramont/mcsm-benchs", "api_url": "https://rseng.github.io/software/api/repos/github/jmiramont/mcsm-benchs"}, {"uid": "github/dwkim78/upsilon", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/upsilon", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/upsilon"}, {"uid": "github/dwkim78/ASTRiDE", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/ASTRiDE", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/ASTRiDE"}, {"uid": "github/dwkim78/pdtrend", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/pdtrend", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/pdtrend"}, {"uid": "github/Joost987/MONDPMesh", "html_url": "https://rseng.github.io/software/repository/github/Joost987/MONDPMesh", "api_url": "https://rseng.github.io/software/api/repos/github/Joost987/MONDPMesh"}, {"uid": "github/SpaceOdyssey/Blobby3D", "html_url": "https://rseng.github.io/software/repository/github/SpaceOdyssey/Blobby3D", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceOdyssey/Blobby3D"}, {"uid": "github/Pranab-JD/LeXInt", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/LeXInt", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/LeXInt"}, {"uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE"}, {"uid": "github/Circuitscape/Omniscape.jl", "html_url": "https://rseng.github.io/software/repository/github/Circuitscape/Omniscape.jl", "api_url": "https://rseng.github.io/software/api/repos/github/Circuitscape/Omniscape.jl"}, {"uid": "github/JoeMcEwen/FAST-PT", "html_url": "https://rseng.github.io/software/repository/github/JoeMcEwen/FAST-PT", "api_url": "https://rseng.github.io/software/api/repos/github/JoeMcEwen/FAST-PT"}, {"uid": "github/davek44/Glimmer-MG", "html_url": "https://rseng.github.io/software/repository/github/davek44/Glimmer-MG", "api_url": "https://rseng.github.io/software/api/repos/github/davek44/Glimmer-MG"}, {"uid": "github/angelmons/landlab", "html_url": "https://rseng.github.io/software/repository/github/angelmons/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/angelmons/landlab"}, {"uid": "github/mariogrs/Simfast21", "html_url": "https://rseng.github.io/software/repository/github/mariogrs/Simfast21", "api_url": "https://rseng.github.io/software/api/repos/github/mariogrs/Simfast21"}, {"uid": "github/QCUncertainty/sigma", "html_url": "https://rseng.github.io/software/repository/github/QCUncertainty/sigma", "api_url": "https://rseng.github.io/software/api/repos/github/QCUncertainty/sigma"}, {"uid": "github/kmkuesters/pooledpeaks", "html_url": "https://rseng.github.io/software/repository/github/kmkuesters/pooledpeaks", "api_url": "https://rseng.github.io/software/api/repos/github/kmkuesters/pooledpeaks"}, {"uid": "github/jmcbroome/BTE", "html_url": "https://rseng.github.io/software/repository/github/jmcbroome/BTE", "api_url": "https://rseng.github.io/software/api/repos/github/jmcbroome/BTE"}, {"uid": "github/FitSNAP/FitSNAP", "html_url": "https://rseng.github.io/software/repository/github/FitSNAP/FitSNAP", "api_url": "https://rseng.github.io/software/api/repos/github/FitSNAP/FitSNAP"}, {"uid": "github/aconley/mbb_emcee", "html_url": "https://rseng.github.io/software/repository/github/aconley/mbb_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/mbb_emcee"}, {"uid": "github/aconley/simple_cosfitter", "html_url": "https://rseng.github.io/software/repository/github/aconley/simple_cosfitter", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/simple_cosfitter"}, {"uid": "github/eelregit/pmwd", "html_url": "https://rseng.github.io/software/repository/github/eelregit/pmwd", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/pmwd"}, {"uid": "github/eelregit/mcfit", "html_url": "https://rseng.github.io/software/repository/github/eelregit/mcfit", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/mcfit"}, {"uid": "github/eelregit/covdisc", "html_url": "https://rseng.github.io/software/repository/github/eelregit/covdisc", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/covdisc"}, {"uid": "github/vdhooftcompmet/MS2LDA", "html_url": "https://rseng.github.io/software/repository/github/vdhooftcompmet/MS2LDA", "api_url": "https://rseng.github.io/software/api/repos/github/vdhooftcompmet/MS2LDA"}, {"uid": "github/musoke/ultradark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/ultradark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/ultradark.jl"}, {"uid": "github/musoke/UltraDark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/UltraDark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/UltraDark.jl"}, {"uid": "github/LMJL-Alea/ktest", "html_url": "https://rseng.github.io/software/repository/github/LMJL-Alea/ktest", "api_url": "https://rseng.github.io/software/api/repos/github/LMJL-Alea/ktest"}, {"uid": "github/twesterhout/lattice-symmetries", "html_url": "https://rseng.github.io/software/repository/github/twesterhout/lattice-symmetries", "api_url": "https://rseng.github.io/software/api/repos/github/twesterhout/lattice-symmetries"}, {"uid": "github/ydLiu-HIT/deSALT", "html_url": "https://rseng.github.io/software/repository/github/ydLiu-HIT/deSALT", "api_url": "https://rseng.github.io/software/api/repos/github/ydLiu-HIT/deSALT"}, {"uid": "github/Sydney-Informatics-Hub/OmixLitMiner", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/OmixLitMiner"}, {"uid": "github/Sydney-Informatics-Hub/geodata-harvester", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/geodata-harvester"}, {"uid": "github/RavenGan/GR2D2", "html_url": "https://rseng.github.io/software/repository/github/RavenGan/GR2D2", "api_url": "https://rseng.github.io/software/api/repos/github/RavenGan/GR2D2"}, {"uid": "github/davidogara/hetGPy", "html_url": "https://rseng.github.io/software/repository/github/davidogara/hetGPy", "api_url": "https://rseng.github.io/software/api/repos/github/davidogara/hetGPy"}, {"uid": "github/hz1010/FIPRESCI_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/hz1010/FIPRESCI_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/hz1010/FIPRESCI_data_analysis"}, {"uid": "github/LeoEgidi/pivmet", "html_url": "https://rseng.github.io/software/repository/github/LeoEgidi/pivmet", "api_url": "https://rseng.github.io/software/api/repos/github/LeoEgidi/pivmet"}, {"uid": "github/longfei8533/SDC", "html_url": "https://rseng.github.io/software/repository/github/longfei8533/SDC", "api_url": "https://rseng.github.io/software/api/repos/github/longfei8533/SDC"}, {"uid": "github/bids-standard/bids-validator", "html_url": "https://rseng.github.io/software/repository/github/bids-standard/bids-validator", "api_url": "https://rseng.github.io/software/api/repos/github/bids-standard/bids-validator"}, {"uid": "github/miche-levi/pncbc-eftofpng", "html_url": "https://rseng.github.io/software/repository/github/miche-levi/pncbc-eftofpng", "api_url": "https://rseng.github.io/software/api/repos/github/miche-levi/pncbc-eftofpng"}, {"uid": "github/sbi-dev/sbi", "html_url": "https://rseng.github.io/software/repository/github/sbi-dev/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/sbi-dev/sbi"}, {"uid": "github/pydata/xarray", "html_url": "https://rseng.github.io/software/repository/github/pydata/xarray", "api_url": "https://rseng.github.io/software/api/repos/github/pydata/xarray"}, {"uid": "github/jesford/cluster-lensing", "html_url": "https://rseng.github.io/software/repository/github/jesford/cluster-lensing", "api_url": "https://rseng.github.io/software/api/repos/github/jesford/cluster-lensing"}, {"uid": "github/calboo/Potential_Field_Calculator", "html_url": "https://rseng.github.io/software/repository/github/calboo/Potential_Field_Calculator", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/Potential_Field_Calculator"}, {"uid": "github/calboo/wigglewave", "html_url": "https://rseng.github.io/software/repository/github/calboo/wigglewave", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/wigglewave"}, {"uid": "github/calboo/TAWAS", "html_url": "https://rseng.github.io/software/repository/github/calboo/TAWAS", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/TAWAS"}, {"uid": "github/yqiuu/starduster", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/starduster", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/starduster"}, {"uid": "github/yqiuu/spectuner", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/spectuner", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/spectuner"}, {"uid": "github/ABSESpy/ABSESpy", "html_url": "https://rseng.github.io/software/repository/github/ABSESpy/ABSESpy", "api_url": "https://rseng.github.io/software/api/repos/github/ABSESpy/ABSESpy"}, {"uid": "github/athulpg007/AMAT", "html_url": "https://rseng.github.io/software/repository/github/athulpg007/AMAT", "api_url": "https://rseng.github.io/software/api/repos/github/athulpg007/AMAT"}, {"uid": "github/kutaslab/fitgrid", "html_url": "https://rseng.github.io/software/repository/github/kutaslab/fitgrid", "api_url": "https://rseng.github.io/software/api/repos/github/kutaslab/fitgrid"}, {"uid": "github/laristra/flecsph", "html_url": "https://rseng.github.io/software/repository/github/laristra/flecsph", "api_url": "https://rseng.github.io/software/api/repos/github/laristra/flecsph"}, {"uid": "github/bodulic/CATS-rb", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rb", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rb"}, {"uid": "github/bodulic/CATS-rf", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rf", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rf"}, {"uid": "github/a-griffiths/AutoSpec", "html_url": "https://rseng.github.io/software/repository/github/a-griffiths/AutoSpec", "api_url": "https://rseng.github.io/software/api/repos/github/a-griffiths/AutoSpec"}, {"uid": "github/CompNet/Renard", "html_url": "https://rseng.github.io/software/repository/github/CompNet/Renard", "api_url": "https://rseng.github.io/software/api/repos/github/CompNet/Renard"}, {"uid": "github/lbcb-sci/raven", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/raven", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/raven"}, {"uid": "github/lbcb-sci/racon", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/racon", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/racon"}, {"uid": "github/lbcb-sci/graphmap2", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/graphmap2", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/graphmap2"}, {"uid": "github/Balaje/iceFem", "html_url": "https://rseng.github.io/software/repository/github/Balaje/iceFem", "api_url": "https://rseng.github.io/software/api/repos/github/Balaje/iceFem"}, {"uid": "github/lucian-ilie/DELPHI", "html_url": "https://rseng.github.io/software/repository/github/lucian-ilie/DELPHI", "api_url": "https://rseng.github.io/software/api/repos/github/lucian-ilie/DELPHI"}, {"uid": "github/altjerue/paramo", "html_url": "https://rseng.github.io/software/repository/github/altjerue/paramo", "api_url": "https://rseng.github.io/software/api/repos/github/altjerue/paramo"}, {"uid": "github/RudolfCardinal/camcops", "html_url": "https://rseng.github.io/software/repository/github/RudolfCardinal/camcops", "api_url": "https://rseng.github.io/software/api/repos/github/RudolfCardinal/camcops"}, {"uid": "github/CLIMADA-project/climada_python", "html_url": "https://rseng.github.io/software/repository/github/CLIMADA-project/climada_python", "api_url": "https://rseng.github.io/software/api/repos/github/CLIMADA-project/climada_python"}, {"uid": "github/toruseo/UXsim", "html_url": "https://rseng.github.io/software/repository/github/toruseo/UXsim", "api_url": "https://rseng.github.io/software/api/repos/github/toruseo/UXsim"}, {"uid": "github/martinvonk/SPEI", "html_url": "https://rseng.github.io/software/repository/github/martinvonk/SPEI", "api_url": "https://rseng.github.io/software/api/repos/github/martinvonk/SPEI"}, {"uid": "github/ColemanRHarris/mxnorm", "html_url": "https://rseng.github.io/software/repository/github/ColemanRHarris/mxnorm", "api_url": "https://rseng.github.io/software/api/repos/github/ColemanRHarris/mxnorm"}, {"uid": "github/riatelab/osrm", "html_url": "https://rseng.github.io/software/repository/github/riatelab/osrm", "api_url": "https://rseng.github.io/software/api/repos/github/riatelab/osrm"}, {"uid": "github/vhaasteren/piccard", "html_url": "https://rseng.github.io/software/repository/github/vhaasteren/piccard", "api_url": "https://rseng.github.io/software/api/repos/github/vhaasteren/piccard"}, {"uid": "github/ExaScience/elprep", "html_url": "https://rseng.github.io/software/repository/github/ExaScience/elprep", "api_url": "https://rseng.github.io/software/api/repos/github/ExaScience/elprep"}, {"uid": "github/JoWestermann/smolyax", "html_url": "https://rseng.github.io/software/repository/github/JoWestermann/smolyax", "api_url": "https://rseng.github.io/software/api/repos/github/JoWestermann/smolyax"}, {"uid": "github/carlosborca/CrystaLattE", "html_url": "https://rseng.github.io/software/repository/github/carlosborca/CrystaLattE", "api_url": "https://rseng.github.io/software/api/repos/github/carlosborca/CrystaLattE"}, {"uid": "github/epi2me-labs/mapula", "html_url": "https://rseng.github.io/software/repository/github/epi2me-labs/mapula", "api_url": "https://rseng.github.io/software/api/repos/github/epi2me-labs/mapula"}, {"uid": "github/eggplantbren/Exoplanet", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/Exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/Exoplanet"}, {"uid": "github/eggplantbren/DNest4", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest4", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest4"}, {"uid": "github/eggplantbren/RJObject", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RJObject", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RJObject"}, {"uid": "github/eggplantbren/DNest3", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest3", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest3"}, {"uid": "github/eggplantbren/RMHB", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RMHB", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RMHB"}, {"uid": "github/EnsembleGovServices/kamodo-core", "html_url": "https://rseng.github.io/software/repository/github/EnsembleGovServices/kamodo-core", "api_url": "https://rseng.github.io/software/api/repos/github/EnsembleGovServices/kamodo-core"}, {"uid": "github/Ecos-platform/ecos", "html_url": "https://rseng.github.io/software/repository/github/Ecos-platform/ecos", "api_url": "https://rseng.github.io/software/api/repos/github/Ecos-platform/ecos"}, {"uid": "github/asalda/FiCUS", "html_url": "https://rseng.github.io/software/repository/github/asalda/FiCUS", "api_url": "https://rseng.github.io/software/api/repos/github/asalda/FiCUS"}, {"uid": "github/Battery-Intelligence-Lab/dtw-cpp", "html_url": "https://rseng.github.io/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", "api_url": "https://rseng.github.io/software/api/repos/github/Battery-Intelligence-Lab/dtw-cpp"}, {"uid": "github/paumard/cubefit", "html_url": "https://rseng.github.io/software/repository/github/paumard/cubefit", "api_url": "https://rseng.github.io/software/api/repos/github/paumard/cubefit"}, {"uid": "github/mehdirezaie/SYSNet", "html_url": "https://rseng.github.io/software/repository/github/mehdirezaie/SYSNet", "api_url": "https://rseng.github.io/software/api/repos/github/mehdirezaie/SYSNet"}, {"uid": "github/BMILAB/scLINE", "html_url": "https://rseng.github.io/software/repository/github/BMILAB/scLINE", "api_url": "https://rseng.github.io/software/api/repos/github/BMILAB/scLINE"}, {"uid": "github/JorenSix/Olaf", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Olaf", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Olaf"}, {"uid": "github/JorenSix/Panako", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Panako", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Panako"}, {"uid": "github/wwood/kingfisher-download", "html_url": "https://rseng.github.io/software/repository/github/wwood/kingfisher-download", "api_url": "https://rseng.github.io/software/api/repos/github/wwood/kingfisher-download"}, {"uid": "github/NuGrid/NuPyCEE", "html_url": "https://rseng.github.io/software/repository/github/NuGrid/NuPyCEE", "api_url": "https://rseng.github.io/software/api/repos/github/NuGrid/NuPyCEE"}, {"uid": "github/SandyYuan/GRAND-HOD", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/GRAND-HOD", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/GRAND-HOD"}, {"uid": "github/SandyYuan/s3PCF", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/s3PCF", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/s3PCF"}, {"uid": "github/shaniAmare/long_read_tools", "html_url": "https://rseng.github.io/software/repository/github/shaniAmare/long_read_tools", "api_url": "https://rseng.github.io/software/api/repos/github/shaniAmare/long_read_tools"}, {"uid": "github/jakeret/tf_unet", "html_url": "https://rseng.github.io/software/repository/github/jakeret/tf_unet", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/tf_unet"}, {"uid": "github/jakeret/abcpmc", "html_url": "https://rseng.github.io/software/repository/github/jakeret/abcpmc", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/abcpmc"}, {"uid": "github/samuelyeewl/specmatch-emp", "html_url": "https://rseng.github.io/software/repository/github/samuelyeewl/specmatch-emp", "api_url": "https://rseng.github.io/software/api/repos/github/samuelyeewl/specmatch-emp"}, {"uid": "github/ml-evs/matador", "html_url": "https://rseng.github.io/software/repository/github/ml-evs/matador", "api_url": "https://rseng.github.io/software/api/repos/github/ml-evs/matador"}, {"uid": "github/lomereiter/sambamba", "html_url": "https://rseng.github.io/software/repository/github/lomereiter/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/lomereiter/sambamba"}, {"uid": "github/imcgreer/simqso", "html_url": "https://rseng.github.io/software/repository/github/imcgreer/simqso", "api_url": "https://rseng.github.io/software/api/repos/github/imcgreer/simqso"}, {"uid": "github/PBjam-projects/PBjam", "html_url": "https://rseng.github.io/software/repository/github/PBjam-projects/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/PBjam-projects/PBjam"}, {"uid": "github/wiki/Install-macs2", "html_url": "https://rseng.github.io/software/repository/github/wiki/Install-macs2", "api_url": "https://rseng.github.io/software/api/repos/github/wiki/Install-macs2"}, {"uid": "github/rnajena/sugar", "html_url": "https://rseng.github.io/software/repository/github/rnajena/sugar", "api_url": "https://rseng.github.io/software/api/repos/github/rnajena/sugar"}, {"uid": "github/Huang-lab/BEACON", "html_url": "https://rseng.github.io/software/repository/github/Huang-lab/BEACON", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-lab/BEACON"}, {"uid": "github/DeltaRCM/pyDeltaRCM", "html_url": "https://rseng.github.io/software/repository/github/DeltaRCM/pyDeltaRCM", "api_url": "https://rseng.github.io/software/api/repos/github/DeltaRCM/pyDeltaRCM"}, {"uid": "github/secastel/phaser", "html_url": "https://rseng.github.io/software/repository/github/secastel/phaser", "api_url": "https://rseng.github.io/software/api/repos/github/secastel/phaser"}, {"uid": "github/ridgelab/ExtRampOnline", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/ExtRampOnline", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/ExtRampOnline"}, {"uid": "github/ridgelab/rampAtlas", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/rampAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/rampAtlas"}, {"uid": "github/jczarnowski/DeepFactors", "html_url": "https://rseng.github.io/software/repository/github/jczarnowski/DeepFactors", "api_url": "https://rseng.github.io/software/api/repos/github/jczarnowski/DeepFactors"}, {"uid": "github/hopr-framework/PyHOPE", "html_url": "https://rseng.github.io/software/repository/github/hopr-framework/PyHOPE", "api_url": "https://rseng.github.io/software/api/repos/github/hopr-framework/PyHOPE"}, {"uid": "github/scrook/neuroml-db", "html_url": "https://rseng.github.io/software/repository/github/scrook/neuroml-db", "api_url": "https://rseng.github.io/software/api/repos/github/scrook/neuroml-db"}, {"uid": "github/rqtl/qtl2", "html_url": "https://rseng.github.io/software/repository/github/rqtl/qtl2", "api_url": "https://rseng.github.io/software/api/repos/github/rqtl/qtl2"}, {"uid": "github/kambrian/SubGen", "html_url": "https://rseng.github.io/software/repository/github/kambrian/SubGen", "api_url": "https://rseng.github.io/software/api/repos/github/kambrian/SubGen"}, {"uid": "github/LucindaLilley/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/LucindaLilley/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/LucindaLilley/PIRATES"}, {"uid": "github/ITA-Solar/rh", "html_url": "https://rseng.github.io/software/repository/github/ITA-Solar/rh", "api_url": "https://rseng.github.io/software/api/repos/github/ITA-Solar/rh"}, {"uid": "github/astrom-tom/dfitspy", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/dfitspy", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/dfitspy"}, {"uid": "github/astrom-tom/specstack", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/specstack", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/specstack"}, {"uid": "github/Stat-Cook/deident", "html_url": "https://rseng.github.io/software/repository/github/Stat-Cook/deident", "api_url": "https://rseng.github.io/software/api/repos/github/Stat-Cook/deident"}, {"uid": "github/bio2byte/constava", "html_url": "https://rseng.github.io/software/repository/github/bio2byte/constava", "api_url": "https://rseng.github.io/software/api/repos/github/bio2byte/constava"}, {"uid": "github/fannyhb/fargene", "html_url": "https://rseng.github.io/software/repository/github/fannyhb/fargene", "api_url": "https://rseng.github.io/software/api/repos/github/fannyhb/fargene"}, {"uid": "github/CM2S/piglot", "html_url": "https://rseng.github.io/software/repository/github/CM2S/piglot", "api_url": "https://rseng.github.io/software/api/repos/github/CM2S/piglot"}, {"uid": "github/vsbuffalo/scythe", "html_url": "https://rseng.github.io/software/repository/github/vsbuffalo/scythe", "api_url": "https://rseng.github.io/software/api/repos/github/vsbuffalo/scythe"}, {"uid": "github/aztekas-code/aztekas-main", "html_url": "https://rseng.github.io/software/repository/github/aztekas-code/aztekas-main", "api_url": "https://rseng.github.io/software/api/repos/github/aztekas-code/aztekas-main"}, {"uid": "github/VegeWaterDynamics/motrainer", "html_url": "https://rseng.github.io/software/repository/github/VegeWaterDynamics/motrainer", "api_url": "https://rseng.github.io/software/api/repos/github/VegeWaterDynamics/motrainer"}, {"uid": "github/Mec-iS/arrowspace-rs", "html_url": "https://rseng.github.io/software/repository/github/Mec-iS/arrowspace-rs", "api_url": "https://rseng.github.io/software/api/repos/github/Mec-iS/arrowspace-rs"}, {"uid": "github/shadden/celmech", "html_url": "https://rseng.github.io/software/repository/github/shadden/celmech", "api_url": "https://rseng.github.io/software/api/repos/github/shadden/celmech"}, {"uid": "github/jiahecui/SenAOReFoc", "html_url": "https://rseng.github.io/software/repository/github/jiahecui/SenAOReFoc", "api_url": "https://rseng.github.io/software/api/repos/github/jiahecui/SenAOReFoc"}, {"uid": "github/trixi-framework/HOHQMesh", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/HOHQMesh", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/HOHQMesh"}, {"uid": "github/trixi-framework/TrixiParticles.jl", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/TrixiParticles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/TrixiParticles.jl"}, {"uid": "github/YuSugihara/MutMap", "html_url": "https://rseng.github.io/software/repository/github/YuSugihara/MutMap", "api_url": "https://rseng.github.io/software/api/repos/github/YuSugihara/MutMap"}, {"uid": "github/anchal-009/SAVED21cm", "html_url": "https://rseng.github.io/software/repository/github/anchal-009/SAVED21cm", "api_url": "https://rseng.github.io/software/api/repos/github/anchal-009/SAVED21cm"}, {"uid": "github/AmruteLab/PyChelator", "html_url": "https://rseng.github.io/software/repository/github/AmruteLab/PyChelator", "api_url": "https://rseng.github.io/software/api/repos/github/AmruteLab/PyChelator"}, {"uid": "github/JLBLine/PUMA", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/PUMA", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/PUMA"}, {"uid": "github/JLBLine/WODEN", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/WODEN", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/WODEN"}, {"uid": "github/ExoCTK/exoctk", "html_url": "https://rseng.github.io/software/repository/github/ExoCTK/exoctk", "api_url": "https://rseng.github.io/software/api/repos/github/ExoCTK/exoctk"}, {"uid": "github/CEED/libCEED", "html_url": "https://rseng.github.io/software/repository/github/CEED/libCEED", "api_url": "https://rseng.github.io/software/api/repos/github/CEED/libCEED"}, {"uid": "github/pynbody/tangos", "html_url": "https://rseng.github.io/software/repository/github/pynbody/tangos", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/tangos"}, {"uid": "github/pynbody/pynbody", "html_url": "https://rseng.github.io/software/repository/github/pynbody/pynbody", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/pynbody"}, {"uid": "github/pynbody/genetIC", "html_url": "https://rseng.github.io/software/repository/github/pynbody/genetIC", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/genetIC"}, {"uid": "github/NctuICLab/PredCRP", "html_url": "https://rseng.github.io/software/repository/github/NctuICLab/PredCRP", "api_url": "https://rseng.github.io/software/api/repos/github/NctuICLab/PredCRP"}, {"uid": "github/nemesiscode/radtrancode", "html_url": "https://rseng.github.io/software/repository/github/nemesiscode/radtrancode", "api_url": "https://rseng.github.io/software/api/repos/github/nemesiscode/radtrancode"}, {"uid": "github/CmPA/iPic3D", "html_url": "https://rseng.github.io/software/repository/github/CmPA/iPic3D", "api_url": "https://rseng.github.io/software/api/repos/github/CmPA/iPic3D"}, {"uid": "github/jlenain/flaapluc", "html_url": "https://rseng.github.io/software/repository/github/jlenain/flaapluc", "api_url": "https://rseng.github.io/software/api/repos/github/jlenain/flaapluc"}, {"uid": "github/rbturnbull/ausdex", "html_url": "https://rseng.github.io/software/repository/github/rbturnbull/ausdex", "api_url": "https://rseng.github.io/software/api/repos/github/rbturnbull/ausdex"}, {"uid": "github/orcasgit/python-fitbit", "html_url": "https://rseng.github.io/software/repository/github/orcasgit/python-fitbit", "api_url": "https://rseng.github.io/software/api/repos/github/orcasgit/python-fitbit"}, {"uid": "github/tgrimes/SeqNet", "html_url": "https://rseng.github.io/software/repository/github/tgrimes/SeqNet", "api_url": "https://rseng.github.io/software/api/repos/github/tgrimes/SeqNet"}, {"uid": "github/jessecambon/tidygeocoder", "html_url": "https://rseng.github.io/software/repository/github/jessecambon/tidygeocoder", "api_url": "https://rseng.github.io/software/api/repos/github/jessecambon/tidygeocoder"}, {"uid": "github/pokynmr/ipick", "html_url": "https://rseng.github.io/software/repository/github/pokynmr/ipick", "api_url": "https://rseng.github.io/software/api/repos/github/pokynmr/ipick"}, {"uid": "github/scikit-learn-contrib/hdbscan", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn-contrib/hdbscan", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn-contrib/hdbscan"}, {"uid": "github/marieBvr/virAnnot", "html_url": "https://rseng.github.io/software/repository/github/marieBvr/virAnnot", "api_url": "https://rseng.github.io/software/api/repos/github/marieBvr/virAnnot"}, {"uid": "github/liulei/volks2", "html_url": "https://rseng.github.io/software/repository/github/liulei/volks2", "api_url": "https://rseng.github.io/software/api/repos/github/liulei/volks2"}, {"uid": "github/konradhoeffner/hdt", "html_url": "https://rseng.github.io/software/repository/github/konradhoeffner/hdt", "api_url": "https://rseng.github.io/software/api/repos/github/konradhoeffner/hdt"}, {"uid": "github/jhkorhonen/MOODS", "html_url": "https://rseng.github.io/software/repository/github/jhkorhonen/MOODS", "api_url": "https://rseng.github.io/software/api/repos/github/jhkorhonen/MOODS"}, {"uid": "github/Muszeb/ENQUIRE", "html_url": "https://rseng.github.io/software/repository/github/Muszeb/ENQUIRE", "api_url": "https://rseng.github.io/software/api/repos/github/Muszeb/ENQUIRE"}, {"uid": "github/hetalang/heta-compiler", "html_url": "https://rseng.github.io/software/repository/github/hetalang/heta-compiler", "api_url": "https://rseng.github.io/software/api/repos/github/hetalang/heta-compiler"}, {"uid": "github/jfowkes/pycutest", "html_url": "https://rseng.github.io/software/repository/github/jfowkes/pycutest", "api_url": "https://rseng.github.io/software/api/repos/github/jfowkes/pycutest"}, {"uid": "github/JeffLuo9/Hep_Ploidy_protocol", "html_url": "https://rseng.github.io/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLuo9/Hep_Ploidy_protocol"}, {"uid": "github/emrecdem/emo-spectre", "html_url": "https://rseng.github.io/software/repository/github/emrecdem/emo-spectre", "api_url": "https://rseng.github.io/software/api/repos/github/emrecdem/emo-spectre"}, {"uid": "github/loosolab/TOBIAS", "html_url": "https://rseng.github.io/software/repository/github/loosolab/TOBIAS", "api_url": "https://rseng.github.io/software/api/repos/github/loosolab/TOBIAS"}, {"uid": "github/cpinte/mcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/mcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/mcfost"}, {"uid": "github/cpinte/pymcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/pymcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/pymcfost"}, {"uid": "github/cpinte/casa_cube", "html_url": "https://rseng.github.io/software/repository/github/cpinte/casa_cube", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/casa_cube"}, {"uid": "github/trivnguyen/florah", "html_url": "https://rseng.github.io/software/repository/github/trivnguyen/florah", "api_url": "https://rseng.github.io/software/api/repos/github/trivnguyen/florah"}, {"uid": "github/logan-pearce/lofti_gaia", "html_url": "https://rseng.github.io/software/repository/github/logan-pearce/lofti_gaia", "api_url": "https://rseng.github.io/software/api/repos/github/logan-pearce/lofti_gaia"}, {"uid": "github/mazzalab/pyntacle", "html_url": "https://rseng.github.io/software/repository/github/mazzalab/pyntacle", "api_url": "https://rseng.github.io/software/api/repos/github/mazzalab/pyntacle"}, {"uid": "github/ltlancas/walter", "html_url": "https://rseng.github.io/software/repository/github/ltlancas/walter", "api_url": "https://rseng.github.io/software/api/repos/github/ltlancas/walter"}, {"uid": "github/obreschkow/dftools", "html_url": "https://rseng.github.io/software/repository/github/obreschkow/dftools", "api_url": "https://rseng.github.io/software/api/repos/github/obreschkow/dftools"}, {"uid": "github/manulera/OpenCloning_frontend", "html_url": "https://rseng.github.io/software/repository/github/manulera/OpenCloning_frontend", "api_url": "https://rseng.github.io/software/api/repos/github/manulera/OpenCloning_frontend"}, {"uid": "github/LindaNab/mecor", "html_url": "https://rseng.github.io/software/repository/github/LindaNab/mecor", "api_url": "https://rseng.github.io/software/api/repos/github/LindaNab/mecor"}, {"uid": "github/tupui/scipy", "html_url": "https://rseng.github.io/software/repository/github/tupui/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/tupui/scipy"}, {"uid": "github/JuliaOpt/JuMP.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOpt/JuMP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOpt/JuMP.jl"}, {"uid": "github/haiyang1986/TVAR", "html_url": "https://rseng.github.io/software/repository/github/haiyang1986/TVAR", "api_url": "https://rseng.github.io/software/api/repos/github/haiyang1986/TVAR"}, {"uid": "github/kd0kfo/cosmology", "html_url": "https://rseng.github.io/software/repository/github/kd0kfo/cosmology", "api_url": "https://rseng.github.io/software/api/repos/github/kd0kfo/cosmology"}, {"uid": "github/teoxxx/nemiss_pbl", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_pbl", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_pbl"}, {"uid": "github/teoxxx/nemiss_proper", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_proper", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_proper"}, {"uid": "github/teoxxx/rlos", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/rlos", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/rlos"}, {"uid": "github/YongyiLuo98/BVSim", "html_url": "https://rseng.github.io/software/repository/github/YongyiLuo98/BVSim", "api_url": "https://rseng.github.io/software/api/repos/github/YongyiLuo98/BVSim"}, {"uid": "github/Multiversario/satcand", "html_url": "https://rseng.github.io/software/repository/github/Multiversario/satcand", "api_url": "https://rseng.github.io/software/api/repos/github/Multiversario/satcand"}, {"uid": "github/humanfactors/FIPS", "html_url": "https://rseng.github.io/software/repository/github/humanfactors/FIPS", "api_url": "https://rseng.github.io/software/api/repos/github/humanfactors/FIPS"}, {"uid": "github/phitterio/phitter-kernel", "html_url": "https://rseng.github.io/software/repository/github/phitterio/phitter-kernel", "api_url": "https://rseng.github.io/software/api/repos/github/phitterio/phitter-kernel"}, {"uid": "github/sebhaan/geobo", "html_url": "https://rseng.github.io/software/repository/github/sebhaan/geobo", "api_url": "https://rseng.github.io/software/api/repos/github/sebhaan/geobo"}, {"uid": "github/widdowquinn/pyani", "html_url": "https://rseng.github.io/software/repository/github/widdowquinn/pyani", "api_url": "https://rseng.github.io/software/api/repos/github/widdowquinn/pyani"}, {"uid": "github/facebookresearch/segment-anything", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/segment-anything", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/segment-anything"}, {"uid": "github/facebookresearch/faiss", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/faiss", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/faiss"}, {"uid": "github/alessiospuriomancini/cosmopower", "html_url": "https://rseng.github.io/software/repository/github/alessiospuriomancini/cosmopower", "api_url": "https://rseng.github.io/software/api/repos/github/alessiospuriomancini/cosmopower"}, {"uid": "github/lucabaldini/ixpeobssim", "html_url": "https://rseng.github.io/software/repository/github/lucabaldini/ixpeobssim", "api_url": "https://rseng.github.io/software/api/repos/github/lucabaldini/ixpeobssim"}, {"uid": "github/pierrexyz/cbird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/cbird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/cbird"}, {"uid": "github/pierrexyz/pybird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/pybird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/pybird"}, {"uid": "github/fitbenchmarking/fitbenchmarking", "html_url": "https://rseng.github.io/software/repository/github/fitbenchmarking/fitbenchmarking", "api_url": "https://rseng.github.io/software/api/repos/github/fitbenchmarking/fitbenchmarking"}, {"uid": "github/fabian-sp/GGLasso", "html_url": "https://rseng.github.io/software/repository/github/fabian-sp/GGLasso", "api_url": "https://rseng.github.io/software/api/repos/github/fabian-sp/GGLasso"}, {"uid": "github/jmhuie/Slicer-SegmentGeometry", "html_url": "https://rseng.github.io/software/repository/github/jmhuie/Slicer-SegmentGeometry", "api_url": "https://rseng.github.io/software/api/repos/github/jmhuie/Slicer-SegmentGeometry"}, {"uid": "github/itsoulos/GlobalOptimus", "html_url": "https://rseng.github.io/software/repository/github/itsoulos/GlobalOptimus", "api_url": "https://rseng.github.io/software/api/repos/github/itsoulos/GlobalOptimus"}, {"uid": "github/oloBion/Retip", "html_url": "https://rseng.github.io/software/repository/github/oloBion/Retip", "api_url": "https://rseng.github.io/software/api/repos/github/oloBion/Retip"}, {"uid": "github/rvaser/thread_pool", "html_url": "https://rseng.github.io/software/repository/github/rvaser/thread_pool", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/thread_pool"}, {"uid": "github/rvaser/spoa", "html_url": "https://rseng.github.io/software/repository/github/rvaser/spoa", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/spoa"}, {"uid": "github/rvaser/bioparser", "html_url": "https://rseng.github.io/software/repository/github/rvaser/bioparser", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/bioparser"}, {"uid": "github/rvaser/sword", "html_url": "https://rseng.github.io/software/repository/github/rvaser/sword", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/sword"}, {"uid": "github/rvaser/rampler", "html_url": "https://rseng.github.io/software/repository/github/rvaser/rampler", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/rampler"}, {"uid": "github/JulianZDing/UniMAP", "html_url": "https://rseng.github.io/software/repository/github/JulianZDing/UniMAP", "api_url": "https://rseng.github.io/software/api/repos/github/JulianZDing/UniMAP"}, {"uid": "github/vmalnathnambiar/exfilms", "html_url": "https://rseng.github.io/software/repository/github/vmalnathnambiar/exfilms", "api_url": "https://rseng.github.io/software/api/repos/github/vmalnathnambiar/exfilms"}, {"uid": "github/ttgump/scDHMap", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDHMap", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDHMap"}, {"uid": "github/ttgump/scDeepCluster_pytorch", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDeepCluster_pytorch", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDeepCluster_pytorch"}, {"uid": "github/sfarrens/sf_deconvolve", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sf_deconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sf_deconvolve"}, {"uid": "github/sfarrens/sfof", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sfof", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sfof"}, {"uid": "github/CavendishAstrophysics/anmap", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/anmap", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/anmap"}, {"uid": "github/CavendishAstrophysics/postmortem", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/postmortem", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/postmortem"}, {"uid": "github/bokulich-lab/q2-fondue", "html_url": "https://rseng.github.io/software/repository/github/bokulich-lab/q2-fondue", "api_url": "https://rseng.github.io/software/api/repos/github/bokulich-lab/q2-fondue"}, {"uid": "github/Effective-Quadratures/Effective-Quadratures", "html_url": "https://rseng.github.io/software/repository/github/Effective-Quadratures/Effective-Quadratures", "api_url": "https://rseng.github.io/software/api/repos/github/Effective-Quadratures/Effective-Quadratures"}, {"uid": "github/JMLascar/SUSHI", "html_url": "https://rseng.github.io/software/repository/github/JMLascar/SUSHI", "api_url": "https://rseng.github.io/software/api/repos/github/JMLascar/SUSHI"}, {"uid": "github/mithun218/GiNaCDE", "html_url": "https://rseng.github.io/software/repository/github/mithun218/GiNaCDE", "api_url": "https://rseng.github.io/software/api/repos/github/mithun218/GiNaCDE"}, {"uid": "github/FZJ-PGI-12/QAOA.jl", "html_url": "https://rseng.github.io/software/repository/github/FZJ-PGI-12/QAOA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-PGI-12/QAOA.jl"}, {"uid": "github/jonathanHuwP/CrystalGrowthTracker", "html_url": "https://rseng.github.io/software/repository/github/jonathanHuwP/CrystalGrowthTracker", "api_url": "https://rseng.github.io/software/api/repos/github/jonathanHuwP/CrystalGrowthTracker"}, {"uid": "github/dmnfarrell/snpgenie", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/snpgenie", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/snpgenie"}, {"uid": "github/dmnfarrell/epitopepredict", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/epitopepredict", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/epitopepredict"}, {"uid": "github/ShubhadeepSadhukhan1993/fastSF", "html_url": "https://rseng.github.io/software/repository/github/ShubhadeepSadhukhan1993/fastSF", "api_url": "https://rseng.github.io/software/api/repos/github/ShubhadeepSadhukhan1993/fastSF"}, {"uid": "github/xuequan818/MatrixFuns.jl", "html_url": "https://rseng.github.io/software/repository/github/xuequan818/MatrixFuns.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xuequan818/MatrixFuns.jl"}, {"uid": "github/ulebreui/shark", "html_url": "https://rseng.github.io/software/repository/github/ulebreui/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ulebreui/shark"}, {"uid": "github/yaml2sbml-dev/yaml2sbml", "html_url": "https://rseng.github.io/software/repository/github/yaml2sbml-dev/yaml2sbml", "api_url": "https://rseng.github.io/software/api/repos/github/yaml2sbml-dev/yaml2sbml"}, {"uid": "github/spyder-ide/spyder", "html_url": "https://rseng.github.io/software/repository/github/spyder-ide/spyder", "api_url": "https://rseng.github.io/software/api/repos/github/spyder-ide/spyder"}, {"uid": "github/cancerit/alleleCount", "html_url": "https://rseng.github.io/software/repository/github/cancerit/alleleCount", "api_url": "https://rseng.github.io/software/api/repos/github/cancerit/alleleCount"}, {"uid": "github/hall-lab/speedseq", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/speedseq", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/speedseq"}, {"uid": "github/hall-lab/bamkit", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/bamkit", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/bamkit"}, {"uid": "github/VasilyKokorev/stardust", "html_url": "https://rseng.github.io/software/repository/github/VasilyKokorev/stardust", "api_url": "https://rseng.github.io/software/api/repos/github/VasilyKokorev/stardust"}, {"uid": "github/mjuvela/ISM", "html_url": "https://rseng.github.io/software/repository/github/mjuvela/ISM", "api_url": "https://rseng.github.io/software/api/repos/github/mjuvela/ISM"}, {"uid": "github/PlanetHunters/watson", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/watson", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/watson"}, {"uid": "github/PlanetHunters/tkmatrix", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/tkmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/tkmatrix"}, {"uid": "github/shergreen/SatGen", "html_url": "https://rseng.github.io/software/repository/github/shergreen/SatGen", "api_url": "https://rseng.github.io/software/api/repos/github/shergreen/SatGen"}, {"uid": "github/nu-radio/NuRadioMC", "html_url": "https://rseng.github.io/software/repository/github/nu-radio/NuRadioMC", "api_url": "https://rseng.github.io/software/api/repos/github/nu-radio/NuRadioMC"}, {"uid": "github/FiorenSt/AutoSourceID-Light", "html_url": "https://rseng.github.io/software/repository/github/FiorenSt/AutoSourceID-Light", "api_url": "https://rseng.github.io/software/api/repos/github/FiorenSt/AutoSourceID-Light"}, {"uid": "github/potree/PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/potree/PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/potree/PotreeConverter"}, {"uid": "github/mdlreyes/void-dwarf-analysis", "html_url": "https://rseng.github.io/software/repository/github/mdlreyes/void-dwarf-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/mdlreyes/void-dwarf-analysis"}, {"uid": "github/bioturing/hera", "html_url": "https://rseng.github.io/software/repository/github/bioturing/hera", "api_url": "https://rseng.github.io/software/api/repos/github/bioturing/hera"}, {"uid": "github/sbird/fake_spectra", "html_url": "https://rseng.github.io/software/repository/github/sbird/fake_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/fake_spectra"}, {"uid": "github/sbird/GenPK", "html_url": "https://rseng.github.io/software/repository/github/sbird/GenPK", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/GenPK"}, {"uid": "github/tmux/tmux", "html_url": "https://rseng.github.io/software/repository/github/tmux/tmux", "api_url": "https://rseng.github.io/software/api/repos/github/tmux/tmux"}, {"uid": "github/CHES2023/PyMsOfa", "html_url": "https://rseng.github.io/software/repository/github/CHES2023/PyMsOfa", "api_url": "https://rseng.github.io/software/api/repos/github/CHES2023/PyMsOfa"}, {"uid": "github/temuller/piscola", "html_url": "https://rseng.github.io/software/repository/github/temuller/piscola", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/piscola"}, {"uid": "github/temuller/hostphot", "html_url": "https://rseng.github.io/software/repository/github/temuller/hostphot", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/hostphot"}, {"uid": "github/rasg-affiliates/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/21cmSense"}, {"uid": "github/rasg-affiliates/healvis", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/healvis", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/healvis"}, {"uid": "github/SteveMacenski/slam_toolbox", "html_url": "https://rseng.github.io/software/repository/github/SteveMacenski/slam_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/SteveMacenski/slam_toolbox"}, {"uid": "github/Jingxuan97/nemesispy", "html_url": "https://rseng.github.io/software/repository/github/Jingxuan97/nemesispy", "api_url": "https://rseng.github.io/software/api/repos/github/Jingxuan97/nemesispy"}, {"uid": "github/sonjageorgievska/CClusTera", "html_url": "https://rseng.github.io/software/repository/github/sonjageorgievska/CClusTera", "api_url": "https://rseng.github.io/software/api/repos/github/sonjageorgievska/CClusTera"}, {"uid": "github/MarkMageeAstro/Riddler", "html_url": "https://rseng.github.io/software/repository/github/MarkMageeAstro/Riddler", "api_url": "https://rseng.github.io/software/api/repos/github/MarkMageeAstro/Riddler"}, {"uid": "github/pypeit/PypeIt", "html_url": "https://rseng.github.io/software/repository/github/pypeit/PypeIt", "api_url": "https://rseng.github.io/software/api/repos/github/pypeit/PypeIt"}, {"uid": "github/SchmollerLab/Cell_ACDC", "html_url": "https://rseng.github.io/software/repository/github/SchmollerLab/Cell_ACDC", "api_url": "https://rseng.github.io/software/api/repos/github/SchmollerLab/Cell_ACDC"}, {"uid": "github/rahulshah1397/LADDER", "html_url": "https://rseng.github.io/software/repository/github/rahulshah1397/LADDER", "api_url": "https://rseng.github.io/software/api/repos/github/rahulshah1397/LADDER"}, {"uid": "github/labxscut/ksak", "html_url": "https://rseng.github.io/software/repository/github/labxscut/ksak", "api_url": "https://rseng.github.io/software/api/repos/github/labxscut/ksak"}, {"uid": "github/BitSeq/BitSeq", "html_url": "https://rseng.github.io/software/repository/github/BitSeq/BitSeq", "api_url": "https://rseng.github.io/software/api/repos/github/BitSeq/BitSeq"}, {"uid": "github/pnsaevik/effluent", "html_url": "https://rseng.github.io/software/repository/github/pnsaevik/effluent", "api_url": "https://rseng.github.io/software/api/repos/github/pnsaevik/effluent"}, {"uid": "github/EBI-Metagenomics/EukCC", "html_url": "https://rseng.github.io/software/repository/github/EBI-Metagenomics/EukCC", "api_url": "https://rseng.github.io/software/api/repos/github/EBI-Metagenomics/EukCC"}, {"uid": "github/institut-de-genomique/HAPO-G", "html_url": "https://rseng.github.io/software/repository/github/institut-de-genomique/HAPO-G", "api_url": "https://rseng.github.io/software/api/repos/github/institut-de-genomique/HAPO-G"}, {"uid": "github/mscroggs/symfem", "html_url": "https://rseng.github.io/software/repository/github/mscroggs/symfem", "api_url": "https://rseng.github.io/software/api/repos/github/mscroggs/symfem"}, {"uid": "github/YosefLab/scvi-tools", "html_url": "https://rseng.github.io/software/repository/github/YosefLab/scvi-tools", "api_url": "https://rseng.github.io/software/api/repos/github/YosefLab/scvi-tools"}, {"uid": "github/cadop/seg1d", "html_url": "https://rseng.github.io/software/repository/github/cadop/seg1d", "api_url": "https://rseng.github.io/software/api/repos/github/cadop/seg1d"}, {"uid": "github/3fon3fonov/exostriker", "html_url": "https://rseng.github.io/software/repository/github/3fon3fonov/exostriker", "api_url": "https://rseng.github.io/software/api/repos/github/3fon3fonov/exostriker"}, {"uid": "github/chadagreene/Tide-Model-Driver", "html_url": "https://rseng.github.io/software/repository/github/chadagreene/Tide-Model-Driver", "api_url": "https://rseng.github.io/software/api/repos/github/chadagreene/Tide-Model-Driver"}, {"uid": "github/indraniel/fqgrep", "html_url": "https://rseng.github.io/software/repository/github/indraniel/fqgrep", "api_url": "https://rseng.github.io/software/api/repos/github/indraniel/fqgrep"}, {"uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "html_url": "https://rseng.github.io/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "api_url": "https://rseng.github.io/software/api/repos/github/AlphonsG/Rainbow-Optical-Flow-For-ALI"}, {"uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", "html_url": "https://rseng.github.io/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", "api_url": "https://rseng.github.io/software/api/repos/github/jmason86/James-s-EVE-Dimming-Index-JEDI"}, {"uid": "github/reedacartwright/dawg", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/dawg", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/dawg"}, {"uid": "github/reedacartwright/ngila", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/ngila", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/ngila"}, {"uid": "github/jiujiezz/tsnad", "html_url": "https://rseng.github.io/software/repository/github/jiujiezz/tsnad", "api_url": "https://rseng.github.io/software/api/repos/github/jiujiezz/tsnad"}, {"uid": "github/omerveille/VSMOD", "html_url": "https://rseng.github.io/software/repository/github/omerveille/VSMOD", "api_url": "https://rseng.github.io/software/api/repos/github/omerveille/VSMOD"}, {"uid": "github/dolaver/calsagos", "html_url": "https://rseng.github.io/software/repository/github/dolaver/calsagos", "api_url": "https://rseng.github.io/software/api/repos/github/dolaver/calsagos"}, {"uid": "github/chfeder/turbulence_generator", "html_url": "https://rseng.github.io/software/repository/github/chfeder/turbulence_generator", "api_url": "https://rseng.github.io/software/api/repos/github/chfeder/turbulence_generator"}, {"uid": "github/SWAT-Sheffield/SAC", "html_url": "https://rseng.github.io/software/repository/github/SWAT-Sheffield/SAC", "api_url": "https://rseng.github.io/software/api/repos/github/SWAT-Sheffield/SAC"}, {"uid": "github/qurit/rt-utils", "html_url": "https://rseng.github.io/software/repository/github/qurit/rt-utils", "api_url": "https://rseng.github.io/software/api/repos/github/qurit/rt-utils"}, {"uid": "github/jboynyc/textnets", "html_url": "https://rseng.github.io/software/repository/github/jboynyc/textnets", "api_url": "https://rseng.github.io/software/api/repos/github/jboynyc/textnets"}, {"uid": "github/metaOmics/MetaPath", "html_url": "https://rseng.github.io/software/repository/github/metaOmics/MetaPath", "api_url": "https://rseng.github.io/software/api/repos/github/metaOmics/MetaPath"}, {"uid": "github/DavidLapous/multipers", "html_url": "https://rseng.github.io/software/repository/github/DavidLapous/multipers", "api_url": "https://rseng.github.io/software/api/repos/github/DavidLapous/multipers"}, {"uid": "github/SDTC-CPMed/scDrugPrio", "html_url": "https://rseng.github.io/software/repository/github/SDTC-CPMed/scDrugPrio", "api_url": "https://rseng.github.io/software/api/repos/github/SDTC-CPMed/scDrugPrio"}, {"uid": "github/marinebon/obisindicators", "html_url": "https://rseng.github.io/software/repository/github/marinebon/obisindicators", "api_url": "https://rseng.github.io/software/api/repos/github/marinebon/obisindicators"}, {"uid": "github/ntveem/sterile-dm", "html_url": "https://rseng.github.io/software/repository/github/ntveem/sterile-dm", "api_url": "https://rseng.github.io/software/api/repos/github/ntveem/sterile-dm"}, {"uid": "github/buschlab/fhirspark", "html_url": "https://rseng.github.io/software/repository/github/buschlab/fhirspark", "api_url": "https://rseng.github.io/software/api/repos/github/buschlab/fhirspark"}, {"uid": "github/CompiledAtBirth/pyCARPool", "html_url": "https://rseng.github.io/software/repository/github/CompiledAtBirth/pyCARPool", "api_url": "https://rseng.github.io/software/api/repos/github/CompiledAtBirth/pyCARPool"}, {"uid": "github/Yu606/odyssey", "html_url": "https://rseng.github.io/software/repository/github/Yu606/odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/Yu606/odyssey"}, {"uid": "github/BrownDwarf/gollum", "html_url": "https://rseng.github.io/software/repository/github/BrownDwarf/gollum", "api_url": "https://rseng.github.io/software/api/repos/github/BrownDwarf/gollum"}, {"uid": "github/tronsgaard/barycorr", "html_url": "https://rseng.github.io/software/repository/github/tronsgaard/barycorr", "api_url": "https://rseng.github.io/software/api/repos/github/tronsgaard/barycorr"}, {"uid": "github/xoopR/set6", "html_url": "https://rseng.github.io/software/repository/github/xoopR/set6", "api_url": "https://rseng.github.io/software/api/repos/github/xoopR/set6"}, {"uid": "github/cvjena/JeFaPaTo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/JeFaPaTo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/JeFaPaTo"}, {"uid": "github/cvjena/freestylo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/freestylo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/freestylo"}, {"uid": "github/HadrienG/InSilicoSeq", "html_url": "https://rseng.github.io/software/repository/github/HadrienG/InSilicoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HadrienG/InSilicoSeq"}, {"uid": "github/sjteresi/TE_Density", "html_url": "https://rseng.github.io/software/repository/github/sjteresi/TE_Density", "api_url": "https://rseng.github.io/software/api/repos/github/sjteresi/TE_Density"}, {"uid": "github/opencobra/cobrapy", "html_url": "https://rseng.github.io/software/repository/github/opencobra/cobrapy", "api_url": "https://rseng.github.io/software/api/repos/github/opencobra/cobrapy"}, {"uid": "github/onnela-lab/beiwe-backend", "html_url": "https://rseng.github.io/software/repository/github/onnela-lab/beiwe-backend", "api_url": "https://rseng.github.io/software/api/repos/github/onnela-lab/beiwe-backend"}, {"uid": "github/justincfeng/PoMiN", "html_url": "https://rseng.github.io/software/repository/github/justincfeng/PoMiN", "api_url": "https://rseng.github.io/software/api/repos/github/justincfeng/PoMiN"}, {"uid": "github/raredd/kmdata", "html_url": "https://rseng.github.io/software/repository/github/raredd/kmdata", "api_url": "https://rseng.github.io/software/api/repos/github/raredd/kmdata"}, {"uid": "github/v-morello/riptide", "html_url": "https://rseng.github.io/software/repository/github/v-morello/riptide", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/riptide"}, {"uid": "github/v-morello/clfd", "html_url": "https://rseng.github.io/software/repository/github/v-morello/clfd", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/clfd"}, {"uid": "github/v-morello/iqrm", "html_url": "https://rseng.github.io/software/repository/github/v-morello/iqrm", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/iqrm"}, {"uid": "github/francescoa97outlook/pyExoRaMa", "html_url": "https://rseng.github.io/software/repository/github/francescoa97outlook/pyExoRaMa", "api_url": "https://rseng.github.io/software/api/repos/github/francescoa97outlook/pyExoRaMa"}, {"uid": "github/cboursnell/crb-blast", "html_url": "https://rseng.github.io/software/repository/github/cboursnell/crb-blast", "api_url": "https://rseng.github.io/software/api/repos/github/cboursnell/crb-blast"}, {"uid": "github/LuisScoccola/persistable", "html_url": "https://rseng.github.io/software/repository/github/LuisScoccola/persistable", "api_url": "https://rseng.github.io/software/api/repos/github/LuisScoccola/persistable"}, {"uid": "github/bwinkel/cygrid", "html_url": "https://rseng.github.io/software/repository/github/bwinkel/cygrid", "api_url": "https://rseng.github.io/software/api/repos/github/bwinkel/cygrid"}, {"uid": "github/PaulSt/NGSTrefftz", "html_url": "https://rseng.github.io/software/repository/github/PaulSt/NGSTrefftz", "api_url": "https://rseng.github.io/software/api/repos/github/PaulSt/NGSTrefftz"}, {"uid": "github/jianlin-cheng/DRCon", "html_url": "https://rseng.github.io/software/repository/github/jianlin-cheng/DRCon", "api_url": "https://rseng.github.io/software/api/repos/github/jianlin-cheng/DRCon"}, {"uid": "github/lucaborsato/trades", "html_url": "https://rseng.github.io/software/repository/github/lucaborsato/trades", "api_url": "https://rseng.github.io/software/api/repos/github/lucaborsato/trades"}, {"uid": "github/TORCH-Consortium/MAGMA", "html_url": "https://rseng.github.io/software/repository/github/TORCH-Consortium/MAGMA", "api_url": "https://rseng.github.io/software/api/repos/github/TORCH-Consortium/MAGMA"}, {"uid": "github/hansenjohnson/WhaleMap", "html_url": "https://rseng.github.io/software/repository/github/hansenjohnson/WhaleMap", "api_url": "https://rseng.github.io/software/api/repos/github/hansenjohnson/WhaleMap"}, {"uid": "github/JeremyLezmy/hypergal", "html_url": "https://rseng.github.io/software/repository/github/JeremyLezmy/hypergal", "api_url": "https://rseng.github.io/software/api/repos/github/JeremyLezmy/hypergal"}, {"uid": "github/lofar-astron/DP3", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/DP3", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/DP3"}, {"uid": "github/lofar-astron/RMextract", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/RMextract", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/RMextract"}, {"uid": "github/statsmodels/statsmodels", "html_url": "https://rseng.github.io/software/repository/github/statsmodels/statsmodels", "api_url": "https://rseng.github.io/software/api/repos/github/statsmodels/statsmodels"}, {"uid": "github/weber1158/eds-classification", "html_url": "https://rseng.github.io/software/repository/github/weber1158/eds-classification", "api_url": "https://rseng.github.io/software/api/repos/github/weber1158/eds-classification"}, {"uid": "github/mpi4jax/mpi4jax", "html_url": "https://rseng.github.io/software/repository/github/mpi4jax/mpi4jax", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4jax/mpi4jax"}, {"uid": "github/JamieDietrich/dynamite", "html_url": "https://rseng.github.io/software/repository/github/JamieDietrich/dynamite", "api_url": "https://rseng.github.io/software/api/repos/github/JamieDietrich/dynamite"}, {"uid": "github/pcingola/SnpEff", "html_url": "https://rseng.github.io/software/repository/github/pcingola/SnpEff", "api_url": "https://rseng.github.io/software/api/repos/github/pcingola/SnpEff"}, {"uid": "github/GRChombo/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRFolres"}, {"uid": "github/GRChombo/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRChombo"}, {"uid": "github/GRChombo/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRDzhadzha"}, {"uid": "github/dolfin-adjoint/pyadjoint", "html_url": "https://rseng.github.io/software/repository/github/dolfin-adjoint/pyadjoint", "api_url": "https://rseng.github.io/software/api/repos/github/dolfin-adjoint/pyadjoint"}, {"uid": "github/genner-lab/meta-fish-lib", "html_url": "https://rseng.github.io/software/repository/github/genner-lab/meta-fish-lib", "api_url": "https://rseng.github.io/software/api/repos/github/genner-lab/meta-fish-lib"}, {"uid": "github/dparks1134/RefineM", "html_url": "https://rseng.github.io/software/repository/github/dparks1134/RefineM", "api_url": "https://rseng.github.io/software/api/repos/github/dparks1134/RefineM"}, {"uid": "github/LidkeLab/matlab-instrument-control", "html_url": "https://rseng.github.io/software/repository/github/LidkeLab/matlab-instrument-control", "api_url": "https://rseng.github.io/software/api/repos/github/LidkeLab/matlab-instrument-control"}, {"uid": "github/marcelm/cutadapt", "html_url": "https://rseng.github.io/software/repository/github/marcelm/cutadapt", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/cutadapt"}, {"uid": "github/marcelm/dnaio", "html_url": "https://rseng.github.io/software/repository/github/marcelm/dnaio", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/dnaio"}, {"uid": "github/marcelm/tinyalign", "html_url": "https://rseng.github.io/software/repository/github/marcelm/tinyalign", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/tinyalign"}, {"uid": "github/marcelm/alignlib", "html_url": "https://rseng.github.io/software/repository/github/marcelm/alignlib", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/alignlib"}, {"uid": "github/fjankowsk/fitpdf", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/fitpdf", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/fitpdf"}, {"uid": "github/fjankowsk/scatfit", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/scatfit", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/scatfit"}, {"uid": "github/nugent-lab/FindPOTATOS-stable", "html_url": "https://rseng.github.io/software/repository/github/nugent-lab/FindPOTATOS-stable", "api_url": "https://rseng.github.io/software/api/repos/github/nugent-lab/FindPOTATOS-stable"}, {"uid": "github/pfaucon/PBSIM-PacBio-Simulator", "html_url": "https://rseng.github.io/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/pfaucon/PBSIM-PacBio-Simulator"}, {"uid": "github/federicomarulli/CosmoBolognaLib", "html_url": "https://rseng.github.io/software/repository/github/federicomarulli/CosmoBolognaLib", "api_url": "https://rseng.github.io/software/api/repos/github/federicomarulli/CosmoBolognaLib"}, {"uid": "github/LiesaSalzer/MobilityTransformR", "html_url": "https://rseng.github.io/software/repository/github/LiesaSalzer/MobilityTransformR", "api_url": "https://rseng.github.io/software/api/repos/github/LiesaSalzer/MobilityTransformR"}, {"uid": "github/siminegroup/E2EDNA2", "html_url": "https://rseng.github.io/software/repository/github/siminegroup/E2EDNA2", "api_url": "https://rseng.github.io/software/api/repos/github/siminegroup/E2EDNA2"}, {"uid": "github/tum-pbs/PhiML", "html_url": "https://rseng.github.io/software/repository/github/tum-pbs/PhiML", "api_url": "https://rseng.github.io/software/api/repos/github/tum-pbs/PhiML"}, {"uid": "github/COBRAPROsimulator/COBRAPRO", "html_url": "https://rseng.github.io/software/repository/github/COBRAPROsimulator/COBRAPRO", "api_url": "https://rseng.github.io/software/api/repos/github/COBRAPROsimulator/COBRAPRO"}, {"uid": "github/complextissue/pytximport", "html_url": "https://rseng.github.io/software/repository/github/complextissue/pytximport", "api_url": "https://rseng.github.io/software/api/repos/github/complextissue/pytximport"}, {"uid": "github/carlacupcake/hashin_shtrikman_mp", "html_url": "https://rseng.github.io/software/repository/github/carlacupcake/hashin_shtrikman_mp", "api_url": "https://rseng.github.io/software/api/repos/github/carlacupcake/hashin_shtrikman_mp"}, {"uid": "github/jmsdsouzaPhD/GWDALI", "html_url": "https://rseng.github.io/software/repository/github/jmsdsouzaPhD/GWDALI", "api_url": "https://rseng.github.io/software/api/repos/github/jmsdsouzaPhD/GWDALI"}, {"uid": "github/JuliaSmoothOptimizers/DCISolver.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/DCISolver.jl"}, {"uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/PDENLPModels.jl"}, {"uid": "github/MetazoaPhylogenomicsLab/FANTASIA", "html_url": "https://rseng.github.io/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", "api_url": "https://rseng.github.io/software/api/repos/github/MetazoaPhylogenomicsLab/FANTASIA"}, {"uid": "github/cdslaborg/paramonte", "html_url": "https://rseng.github.io/software/repository/github/cdslaborg/paramonte", "api_url": "https://rseng.github.io/software/api/repos/github/cdslaborg/paramonte"}, {"uid": "github/yuhuan-wu/mobilesal", "html_url": "https://rseng.github.io/software/repository/github/yuhuan-wu/mobilesal", "api_url": "https://rseng.github.io/software/api/repos/github/yuhuan-wu/mobilesal"}, {"uid": "github/Keck-DataReductionPipelines/KcwiDRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KcwiDRP"}, {"uid": "github/Keck-DataReductionPipelines/KCWI_DRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KCWI_DRP"}, {"uid": "github/LCOGT/banzai", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai"}, {"uid": "github/LCOGT/neoexchange", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/neoexchange", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/neoexchange"}, {"uid": "github/LCOGT/banzai-nres", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai-nres", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai-nres"}, {"uid": "github/twosixlabs/magicwand-datatool", "html_url": "https://rseng.github.io/software/repository/github/twosixlabs/magicwand-datatool", "api_url": "https://rseng.github.io/software/api/repos/github/twosixlabs/magicwand-datatool"}, {"uid": "github/linuxscout/pyarabic", "html_url": "https://rseng.github.io/software/repository/github/linuxscout/pyarabic", "api_url": "https://rseng.github.io/software/api/repos/github/linuxscout/pyarabic"}, {"uid": "github/MRCIEU/metaboprep", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/metaboprep", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/metaboprep"}, {"uid": "github/MRCIEU/PHESANT", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/PHESANT", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/PHESANT"}, {"uid": "github/bobleesj/cifkit", "html_url": "https://rseng.github.io/software/repository/github/bobleesj/cifkit", "api_url": "https://rseng.github.io/software/api/repos/github/bobleesj/cifkit"}, {"uid": "github/MFaymon/spINAR", "html_url": "https://rseng.github.io/software/repository/github/MFaymon/spINAR", "api_url": "https://rseng.github.io/software/api/repos/github/MFaymon/spINAR"}, {"uid": "github/streamlit/streamlit", "html_url": "https://rseng.github.io/software/repository/github/streamlit/streamlit", "api_url": "https://rseng.github.io/software/api/repos/github/streamlit/streamlit"}, {"uid": "github/el2718/FastQSL", "html_url": "https://rseng.github.io/software/repository/github/el2718/FastQSL", "api_url": "https://rseng.github.io/software/api/repos/github/el2718/FastQSL"}, {"uid": "github/datalad/datalad", "html_url": "https://rseng.github.io/software/repository/github/datalad/datalad", "api_url": "https://rseng.github.io/software/api/repos/github/datalad/datalad"}, {"uid": "github/tribshms/tRIBS", "html_url": "https://rseng.github.io/software/repository/github/tribshms/tRIBS", "api_url": "https://rseng.github.io/software/api/repos/github/tribshms/tRIBS"}, {"uid": "github/azizka/IUCNN", "html_url": "https://rseng.github.io/software/repository/github/azizka/IUCNN", "api_url": "https://rseng.github.io/software/api/repos/github/azizka/IUCNN"}, {"uid": "github/hope-data-science/tidyfst", "html_url": "https://rseng.github.io/software/repository/github/hope-data-science/tidyfst", "api_url": "https://rseng.github.io/software/api/repos/github/hope-data-science/tidyfst"}, {"uid": "github/danielemelini/ALMA3", "html_url": "https://rseng.github.io/software/repository/github/danielemelini/ALMA3", "api_url": "https://rseng.github.io/software/api/repos/github/danielemelini/ALMA3"}, {"uid": "github/jalombar/starsmasher", "html_url": "https://rseng.github.io/software/repository/github/jalombar/starsmasher", "api_url": "https://rseng.github.io/software/api/repos/github/jalombar/starsmasher"}, {"uid": "github/scipion-em/scipion-em-continuousflex", "html_url": "https://rseng.github.io/software/repository/github/scipion-em/scipion-em-continuousflex", "api_url": "https://rseng.github.io/software/api/repos/github/scipion-em/scipion-em-continuousflex"}, {"uid": "github/Bios4Biol/intronSeeker", "html_url": "https://rseng.github.io/software/repository/github/Bios4Biol/intronSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/Bios4Biol/intronSeeker"}, {"uid": "github/vitor-de-oliveira/rheovolution", "html_url": "https://rseng.github.io/software/repository/github/vitor-de-oliveira/rheovolution", "api_url": "https://rseng.github.io/software/api/repos/github/vitor-de-oliveira/rheovolution"}, {"uid": "github/Single-Cell-Graph-Learning/scSGL", "html_url": "https://rseng.github.io/software/repository/github/Single-Cell-Graph-Learning/scSGL", "api_url": "https://rseng.github.io/software/api/repos/github/Single-Cell-Graph-Learning/scSGL"}, {"uid": "github/benmontet/f3", "html_url": "https://rseng.github.io/software/repository/github/benmontet/f3", "api_url": "https://rseng.github.io/software/api/repos/github/benmontet/f3"}, {"uid": "github/ShaunFell/GRBoondi", "html_url": "https://rseng.github.io/software/repository/github/ShaunFell/GRBoondi", "api_url": "https://rseng.github.io/software/api/repos/github/ShaunFell/GRBoondi"}, {"uid": "github/thorstone25/qups", "html_url": "https://rseng.github.io/software/repository/github/thorstone25/qups", "api_url": "https://rseng.github.io/software/api/repos/github/thorstone25/qups"}, {"uid": "github/pfeinsper/drone-swarm-search", "html_url": "https://rseng.github.io/software/repository/github/pfeinsper/drone-swarm-search", "api_url": "https://rseng.github.io/software/api/repos/github/pfeinsper/drone-swarm-search"}, {"uid": "github/yukiteruono/pbsim2", "html_url": "https://rseng.github.io/software/repository/github/yukiteruono/pbsim2", "api_url": "https://rseng.github.io/software/api/repos/github/yukiteruono/pbsim2"}, {"uid": "github/Cadaei-Yuvxvs/OSHy-X", "html_url": "https://rseng.github.io/software/repository/github/Cadaei-Yuvxvs/OSHy-X", "api_url": "https://rseng.github.io/software/api/repos/github/Cadaei-Yuvxvs/OSHy-X"}, {"uid": "github/spastras/galclass", "html_url": "https://rseng.github.io/software/repository/github/spastras/galclass", "api_url": "https://rseng.github.io/software/api/repos/github/spastras/galclass"}, {"uid": "github/Illumina/ExpansionHunterDenovo", "html_url": "https://rseng.github.io/software/repository/github/Illumina/ExpansionHunterDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/ExpansionHunterDenovo"}, {"uid": "github/Illumina/SpliceAI", "html_url": "https://rseng.github.io/software/repository/github/Illumina/SpliceAI", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/SpliceAI"}, {"uid": "github/Illumina/akt", "html_url": "https://rseng.github.io/software/repository/github/Illumina/akt", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/akt"}, {"uid": "github/Illumina/manta", "html_url": "https://rseng.github.io/software/repository/github/Illumina/manta", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/manta"}, {"uid": "github/Illumina/canvas", "html_url": "https://rseng.github.io/software/repository/github/Illumina/canvas", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/canvas"}, {"uid": "github/Illumina/MarViN", "html_url": "https://rseng.github.io/software/repository/github/Illumina/MarViN", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/MarViN"}, {"uid": "github/Illumina/strelka", "html_url": "https://rseng.github.io/software/repository/github/Illumina/strelka", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/strelka"}, {"uid": "github/neurogeriatricskiel/NGMT", "html_url": "https://rseng.github.io/software/repository/github/neurogeriatricskiel/NGMT", "api_url": "https://rseng.github.io/software/api/repos/github/neurogeriatricskiel/NGMT"}, {"uid": "github/ADThomas-astro/oxaf", "html_url": "https://rseng.github.io/software/repository/github/ADThomas-astro/oxaf", "api_url": "https://rseng.github.io/software/api/repos/github/ADThomas-astro/oxaf"}, {"uid": "github/Open-Minds-Lab/MRdataset", "html_url": "https://rseng.github.io/software/repository/github/Open-Minds-Lab/MRdataset", "api_url": "https://rseng.github.io/software/api/repos/github/Open-Minds-Lab/MRdataset"}, {"uid": "github/Jane110111107/IsoTree", "html_url": "https://rseng.github.io/software/repository/github/Jane110111107/IsoTree", "api_url": "https://rseng.github.io/software/api/repos/github/Jane110111107/IsoTree"}, {"uid": "github/maayane/catsHTM", "html_url": "https://rseng.github.io/software/repository/github/maayane/catsHTM", "api_url": "https://rseng.github.io/software/api/repos/github/maayane/catsHTM"}, {"uid": "github/drupke/questfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/questfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/questfit"}, {"uid": "github/drupke/ifsred", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsred", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsred"}, {"uid": "github/drupke/ifsfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsfit"}, {"uid": "github/cjneely10/EukMetaSanity", "html_url": "https://rseng.github.io/software/repository/github/cjneely10/EukMetaSanity", "api_url": "https://rseng.github.io/software/api/repos/github/cjneely10/EukMetaSanity"}, {"uid": "github/asmusskar/ALVA", "html_url": "https://rseng.github.io/software/repository/github/asmusskar/ALVA", "api_url": "https://rseng.github.io/software/api/repos/github/asmusskar/ALVA"}, {"uid": "github/huangnengCSU/compleasm", "html_url": "https://rseng.github.io/software/repository/github/huangnengCSU/compleasm", "api_url": "https://rseng.github.io/software/api/repos/github/huangnengCSU/compleasm"}, {"uid": "github/lijing28101/maize_pyrpipe", "html_url": "https://rseng.github.io/software/repository/github/lijing28101/maize_pyrpipe", "api_url": "https://rseng.github.io/software/api/repos/github/lijing28101/maize_pyrpipe"}, {"uid": "github/ymocquar/HOODESolver.jl", "html_url": "https://rseng.github.io/software/repository/github/ymocquar/HOODESolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ymocquar/HOODESolver.jl"}, {"uid": "github/dfm/corner.py", "html_url": "https://rseng.github.io/software/repository/github/dfm/corner.py", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/corner.py"}, {"uid": "github/dfm/ketu", "html_url": "https://rseng.github.io/software/repository/github/dfm/ketu", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/ketu"}, {"uid": "github/dfm/photodynam", "html_url": "https://rseng.github.io/software/repository/github/dfm/photodynam", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/photodynam"}, {"uid": "github/dfm/exopop", "html_url": "https://rseng.github.io/software/repository/github/dfm/exopop", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/exopop"}, {"uid": "github/dfm/celerite", "html_url": "https://rseng.github.io/software/repository/github/dfm/celerite", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/celerite"}, {"uid": "github/N-BodyShop/smooth", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/smooth", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/smooth"}, {"uid": "github/N-BodyShop/fof", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/fof", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/fof"}, {"uid": "github/marver17/DICOMSEG_Converter", "html_url": "https://rseng.github.io/software/repository/github/marver17/DICOMSEG_Converter", "api_url": "https://rseng.github.io/software/api/repos/github/marver17/DICOMSEG_Converter"}, {"uid": "github/CederGroupHub/smol", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/smol", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/smol"}, {"uid": "github/CederGroupHub/sparse-lm", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/sparse-lm", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/sparse-lm"}, {"uid": "github/skyfielders/python-skyfield", "html_url": "https://rseng.github.io/software/repository/github/skyfielders/python-skyfield", "api_url": "https://rseng.github.io/software/api/repos/github/skyfielders/python-skyfield"}, {"uid": "github/bcjaeger/aorsf", "html_url": "https://rseng.github.io/software/repository/github/bcjaeger/aorsf", "api_url": "https://rseng.github.io/software/api/repos/github/bcjaeger/aorsf"}, {"uid": "github/UcarLab/AMULET", "html_url": "https://rseng.github.io/software/repository/github/UcarLab/AMULET", "api_url": "https://rseng.github.io/software/api/repos/github/UcarLab/AMULET"}, {"uid": "github/feature-engine/feature_engine", "html_url": "https://rseng.github.io/software/repository/github/feature-engine/feature_engine", "api_url": "https://rseng.github.io/software/api/repos/github/feature-engine/feature_engine"}, {"uid": "github/SERVIR/servir-aces", "html_url": "https://rseng.github.io/software/repository/github/SERVIR/servir-aces", "api_url": "https://rseng.github.io/software/api/repos/github/SERVIR/servir-aces"}, {"uid": "github/rdpstaff/AlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/AlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/AlignmentTools"}, {"uid": "github/rdpstaff/classifier", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/classifier", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/classifier"}, {"uid": "github/rdpstaff/ReadSeq", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/ReadSeq", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/ReadSeq"}, {"uid": "github/rdpstaff/TaxonomyTree", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/TaxonomyTree", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/TaxonomyTree"}, {"uid": "github/igrins/plp", "html_url": "https://rseng.github.io/software/repository/github/igrins/plp", "api_url": "https://rseng.github.io/software/api/repos/github/igrins/plp"}, {"uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", "html_url": "https://rseng.github.io/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", "api_url": "https://rseng.github.io/software/api/repos/github/FSEC-Photovoltaics/pvrpm-lcoe"}, {"uid": "github/mzytnicki/srnaMapper", "html_url": "https://rseng.github.io/software/repository/github/mzytnicki/srnaMapper", "api_url": "https://rseng.github.io/software/api/repos/github/mzytnicki/srnaMapper"}, {"uid": "github/gromacs/gromacs", "html_url": "https://rseng.github.io/software/repository/github/gromacs/gromacs", "api_url": "https://rseng.github.io/software/api/repos/github/gromacs/gromacs"}, {"uid": "github/brainets/frites", "html_url": "https://rseng.github.io/software/repository/github/brainets/frites", "api_url": "https://rseng.github.io/software/api/repos/github/brainets/frites"}, {"uid": "github/reizio/reiz.io", "html_url": "https://rseng.github.io/software/repository/github/reizio/reiz.io", "api_url": "https://rseng.github.io/software/api/repos/github/reizio/reiz.io"}, {"uid": "github/dartoon/galight", "html_url": "https://rseng.github.io/software/repository/github/dartoon/galight", "api_url": "https://rseng.github.io/software/api/repos/github/dartoon/galight"}, {"uid": "github/elizabethnewman/hessQuik", "html_url": "https://rseng.github.io/software/repository/github/elizabethnewman/hessQuik", "api_url": "https://rseng.github.io/software/api/repos/github/elizabethnewman/hessQuik"}, {"uid": "github/range-et/PGL", "html_url": "https://rseng.github.io/software/repository/github/range-et/PGL", "api_url": "https://rseng.github.io/software/api/repos/github/range-et/PGL"}, {"uid": "github/astroweaver/the_farmer", "html_url": "https://rseng.github.io/software/repository/github/astroweaver/the_farmer", "api_url": "https://rseng.github.io/software/api/repos/github/astroweaver/the_farmer"}, {"uid": "github/fmicompbio/ez_zarr", "html_url": "https://rseng.github.io/software/repository/github/fmicompbio/ez_zarr", "api_url": "https://rseng.github.io/software/api/repos/github/fmicompbio/ez_zarr"}, {"uid": "github/Electrostatics/apbs", "html_url": "https://rseng.github.io/software/repository/github/Electrostatics/apbs", "api_url": "https://rseng.github.io/software/api/repos/github/Electrostatics/apbs"}, {"uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeodynamics/GeophysicalModelGenerator.jl"}, {"uid": "github/pyccel/pyccel", "html_url": "https://rseng.github.io/software/repository/github/pyccel/pyccel", "api_url": "https://rseng.github.io/software/api/repos/github/pyccel/pyccel"}, {"uid": "github/hiddenSymmetries/simsopt", "html_url": "https://rseng.github.io/software/repository/github/hiddenSymmetries/simsopt", "api_url": "https://rseng.github.io/software/api/repos/github/hiddenSymmetries/simsopt"}, {"uid": "github/tbrown122387/pf", "html_url": "https://rseng.github.io/software/repository/github/tbrown122387/pf", "api_url": "https://rseng.github.io/software/api/repos/github/tbrown122387/pf"}, {"uid": "github/tresoldi/ngesh", "html_url": "https://rseng.github.io/software/repository/github/tresoldi/ngesh", "api_url": "https://rseng.github.io/software/api/repos/github/tresoldi/ngesh"}, {"uid": "github/geoffryan/afterglowpy", "html_url": "https://rseng.github.io/software/repository/github/geoffryan/afterglowpy", "api_url": "https://rseng.github.io/software/api/repos/github/geoffryan/afterglowpy"}, {"uid": "github/UNSW-CEEM/nempy", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/nempy", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/nempy"}, {"uid": "github/UNSW-CEEM/NEMSEER", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/NEMSEER", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/NEMSEER"}, {"uid": "github/lammps/lammps", "html_url": "https://rseng.github.io/software/repository/github/lammps/lammps", "api_url": "https://rseng.github.io/software/api/repos/github/lammps/lammps"}, {"uid": "github/kim554/wdec", "html_url": "https://rseng.github.io/software/repository/github/kim554/wdec", "api_url": "https://rseng.github.io/software/api/repos/github/kim554/wdec"}, {"uid": "github/SharmaLlama/ticktack", "html_url": "https://rseng.github.io/software/repository/github/SharmaLlama/ticktack", "api_url": "https://rseng.github.io/software/api/repos/github/SharmaLlama/ticktack"}, {"uid": "github/tamarervin/SolAster", "html_url": "https://rseng.github.io/software/repository/github/tamarervin/SolAster", "api_url": "https://rseng.github.io/software/api/repos/github/tamarervin/SolAster"}, {"uid": "github/dgrun/FateID", "html_url": "https://rseng.github.io/software/repository/github/dgrun/FateID", "api_url": "https://rseng.github.io/software/api/repos/github/dgrun/FateID"}, {"uid": "github/backyardworlds/wiseview", "html_url": "https://rseng.github.io/software/repository/github/backyardworlds/wiseview", "api_url": "https://rseng.github.io/software/api/repos/github/backyardworlds/wiseview"}, {"uid": "github/precice/aste", "html_url": "https://rseng.github.io/software/repository/github/precice/aste", "api_url": "https://rseng.github.io/software/api/repos/github/precice/aste"}, {"uid": "github/precice/micro-manager", "html_url": "https://rseng.github.io/software/repository/github/precice/micro-manager", "api_url": "https://rseng.github.io/software/api/repos/github/precice/micro-manager"}, {"uid": "github/huishenlab/biscuit", "html_url": "https://rseng.github.io/software/repository/github/huishenlab/biscuit", "api_url": "https://rseng.github.io/software/api/repos/github/huishenlab/biscuit"}, {"uid": "github/intelligent-soft-robots/o80", "html_url": "https://rseng.github.io/software/repository/github/intelligent-soft-robots/o80", "api_url": "https://rseng.github.io/software/api/repos/github/intelligent-soft-robots/o80"}, {"uid": "github/Starfish-develop/Starfish", "html_url": "https://rseng.github.io/software/repository/github/Starfish-develop/Starfish", "api_url": "https://rseng.github.io/software/api/repos/github/Starfish-develop/Starfish"}, {"uid": "github/lllangWV/ParquetDB", "html_url": "https://rseng.github.io/software/repository/github/lllangWV/ParquetDB", "api_url": "https://rseng.github.io/software/api/repos/github/lllangWV/ParquetDB"}, {"uid": "github/interactivereport/OmicsView0", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/OmicsView0", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/OmicsView0"}, {"uid": "github/interactivereport/scRNASequest", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/scRNASequest", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/scRNASequest"}, {"uid": "github/ashleychontos/pySYD", "html_url": "https://rseng.github.io/software/repository/github/ashleychontos/pySYD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleychontos/pySYD"}, {"uid": "github/venkateshgopinath/FAlCon-DNS", "html_url": "https://rseng.github.io/software/repository/github/venkateshgopinath/FAlCon-DNS", "api_url": "https://rseng.github.io/software/api/repos/github/venkateshgopinath/FAlCon-DNS"}, {"uid": "github/reneheller/pile-up", "html_url": "https://rseng.github.io/software/repository/github/reneheller/pile-up", "api_url": "https://rseng.github.io/software/api/repos/github/reneheller/pile-up"}, {"uid": "github/gnave/Xgremlin", "html_url": "https://rseng.github.io/software/repository/github/gnave/Xgremlin", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/Xgremlin"}, {"uid": "github/gnave/pybranch", "html_url": "https://rseng.github.io/software/repository/github/gnave/pybranch", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/pybranch"}, {"uid": "github/ericmandel/funtools", "html_url": "https://rseng.github.io/software/repository/github/ericmandel/funtools", "api_url": "https://rseng.github.io/software/api/repos/github/ericmandel/funtools"}, {"uid": "github/Jayshil/pycdata", "html_url": "https://rseng.github.io/software/repository/github/Jayshil/pycdata", "api_url": "https://rseng.github.io/software/api/repos/github/Jayshil/pycdata"}, {"uid": "github/plazar/coast_guard", "html_url": "https://rseng.github.io/software/repository/github/plazar/coast_guard", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/coast_guard"}, {"uid": "github/plazar/TOASTER", "html_url": "https://rseng.github.io/software/repository/github/plazar/TOASTER", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/TOASTER"}, {"uid": "github/vinisalazar/metaphor", "html_url": "https://rseng.github.io/software/repository/github/vinisalazar/metaphor", "api_url": "https://rseng.github.io/software/api/repos/github/vinisalazar/metaphor"}, {"uid": "github/MIT-LAE/TASOPT.jl", "html_url": "https://rseng.github.io/software/repository/github/MIT-LAE/TASOPT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-LAE/TASOPT.jl"}, {"uid": "github/jpierel14/sntd", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/sntd", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/sntd"}, {"uid": "github/jpierel14/snsed", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/snsed", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/snsed"}, {"uid": "github/sharmalab/eaglescope", "html_url": "https://rseng.github.io/software/repository/github/sharmalab/eaglescope", "api_url": "https://rseng.github.io/software/api/repos/github/sharmalab/eaglescope"}, {"uid": "github/tp2vis/distribute", "html_url": "https://rseng.github.io/software/repository/github/tp2vis/distribute", "api_url": "https://rseng.github.io/software/api/repos/github/tp2vis/distribute"}, {"uid": "github/cmillion/gPhoton", "html_url": "https://rseng.github.io/software/repository/github/cmillion/gPhoton", "api_url": "https://rseng.github.io/software/api/repos/github/cmillion/gPhoton"}, {"uid": "github/q1cui/discourseGT", "html_url": "https://rseng.github.io/software/repository/github/q1cui/discourseGT", "api_url": "https://rseng.github.io/software/api/repos/github/q1cui/discourseGT"}, {"uid": "github/ialbert/genescape-central", "html_url": "https://rseng.github.io/software/repository/github/ialbert/genescape-central", "api_url": "https://rseng.github.io/software/api/repos/github/ialbert/genescape-central"}, {"uid": "github/ageller/firefly", "html_url": "https://rseng.github.io/software/repository/github/ageller/firefly", "api_url": "https://rseng.github.io/software/api/repos/github/ageller/firefly"}, {"uid": "github/cov-lineages/pangoLEARN", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangoLEARN", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangoLEARN"}, {"uid": "github/cov-lineages/pangolin", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangolin"}, {"uid": "github/HERA-Team/matvis", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/matvis", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/matvis"}, {"uid": "github/HERA-Team/aipy", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/aipy", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/aipy"}, {"uid": "github/HERA-Team/hera_opm", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/hera_opm", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/hera_opm"}, {"uid": "github/jpuritz/dDocent", "html_url": "https://rseng.github.io/software/repository/github/jpuritz/dDocent", "api_url": "https://rseng.github.io/software/api/repos/github/jpuritz/dDocent"}, {"uid": "github/google/flax", "html_url": "https://rseng.github.io/software/repository/github/google/flax", "api_url": "https://rseng.github.io/software/api/repos/github/google/flax"}, {"uid": "github/google/best", "html_url": "https://rseng.github.io/software/repository/github/google/best", "api_url": "https://rseng.github.io/software/api/repos/github/google/best"}, {"uid": "github/google/caliban", "html_url": "https://rseng.github.io/software/repository/github/google/caliban", "api_url": "https://rseng.github.io/software/api/repos/github/google/caliban"}, {"uid": "github/google/jax", "html_url": "https://rseng.github.io/software/repository/github/google/jax", "api_url": "https://rseng.github.io/software/api/repos/github/google/jax"}, {"uid": "github/beastraban/INSANE", "html_url": "https://rseng.github.io/software/repository/github/beastraban/INSANE", "api_url": "https://rseng.github.io/software/api/repos/github/beastraban/INSANE"}, {"uid": "github/manchunyeung/wolensing", "html_url": "https://rseng.github.io/software/repository/github/manchunyeung/wolensing", "api_url": "https://rseng.github.io/software/api/repos/github/manchunyeung/wolensing"}, {"uid": "github/vosjo/speedyfit", "html_url": "https://rseng.github.io/software/repository/github/vosjo/speedyfit", "api_url": "https://rseng.github.io/software/api/repos/github/vosjo/speedyfit"}, {"uid": "github/marziarivi/RadioLensfit2", "html_url": "https://rseng.github.io/software/repository/github/marziarivi/RadioLensfit2", "api_url": "https://rseng.github.io/software/api/repos/github/marziarivi/RadioLensfit2"}, {"uid": "github/aaryapatil/tapify", "html_url": "https://rseng.github.io/software/repository/github/aaryapatil/tapify", "api_url": "https://rseng.github.io/software/api/repos/github/aaryapatil/tapify"}, {"uid": "github/vcftools/index.html", "html_url": "https://rseng.github.io/software/repository/github/vcftools/index.html", "api_url": "https://rseng.github.io/software/api/repos/github/vcftools/index.html"}, {"uid": "github/Pometry/Raphtory", "html_url": "https://rseng.github.io/software/repository/github/Pometry/Raphtory", "api_url": "https://rseng.github.io/software/api/repos/github/Pometry/Raphtory"}, {"uid": "github/18parkky/NanoMnT", "html_url": "https://rseng.github.io/software/repository/github/18parkky/NanoMnT", "api_url": "https://rseng.github.io/software/api/repos/github/18parkky/NanoMnT"}, {"uid": "github/SHF-NAILResearchGroup/HINA", "html_url": "https://rseng.github.io/software/repository/github/SHF-NAILResearchGroup/HINA", "api_url": "https://rseng.github.io/software/api/repos/github/SHF-NAILResearchGroup/HINA"}, {"uid": "github/pepkit/geofetch", "html_url": "https://rseng.github.io/software/repository/github/pepkit/geofetch", "api_url": "https://rseng.github.io/software/api/repos/github/pepkit/geofetch"}, {"uid": "github/tariqdaouda/CAMAP", "html_url": "https://rseng.github.io/software/repository/github/tariqdaouda/CAMAP", "api_url": "https://rseng.github.io/software/api/repos/github/tariqdaouda/CAMAP"}, {"uid": "github/sagepublishing/rejected_article_tracker_pkg", "html_url": "https://rseng.github.io/software/repository/github/sagepublishing/rejected_article_tracker_pkg", "api_url": "https://rseng.github.io/software/api/repos/github/sagepublishing/rejected_article_tracker_pkg"}, {"uid": "github/OBrink/RanDepict", "html_url": "https://rseng.github.io/software/repository/github/OBrink/RanDepict", "api_url": "https://rseng.github.io/software/api/repos/github/OBrink/RanDepict"}, {"uid": "github/YenWenWang/HapDipKinship", "html_url": "https://rseng.github.io/software/repository/github/YenWenWang/HapDipKinship", "api_url": "https://rseng.github.io/software/api/repos/github/YenWenWang/HapDipKinship"}, {"uid": "github/JoelForamitti/agentpy", "html_url": "https://rseng.github.io/software/repository/github/JoelForamitti/agentpy", "api_url": "https://rseng.github.io/software/api/repos/github/JoelForamitti/agentpy"}, {"uid": "github/astrostat/BASCS", "html_url": "https://rseng.github.io/software/repository/github/astrostat/BASCS", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/BASCS"}, {"uid": "github/astrostat/TD-CARMA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/TD-CARMA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/TD-CARMA"}, {"uid": "github/astrostat/Automark", "html_url": "https://rseng.github.io/software/repository/github/astrostat/Automark", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/Automark"}, {"uid": "github/astrostat/LIRA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/LIRA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/LIRA"}, {"uid": "github/nicolet5/DiffCapAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/nicolet5/DiffCapAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/nicolet5/DiffCapAnalyzer"}, {"uid": "github/LINNAE-project/SFB-Annotator", "html_url": "https://rseng.github.io/software/repository/github/LINNAE-project/SFB-Annotator", "api_url": "https://rseng.github.io/software/api/repos/github/LINNAE-project/SFB-Annotator"}, {"uid": "github/marccanby/linguiphyr", "html_url": "https://rseng.github.io/software/repository/github/marccanby/linguiphyr", "api_url": "https://rseng.github.io/software/api/repos/github/marccanby/linguiphyr"}, {"uid": "github/ICRAR/shark", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/shark"}, {"uid": "github/ICRAR/libprofit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/libprofit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/libprofit"}, {"uid": "github/ICRAR/ProFit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/ProFit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/ProFit"}, {"uid": "github/hpparvi/opents", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/opents", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/opents"}, {"uid": "github/hpparvi/PyTransit", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/PyTransit", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/PyTransit"}, {"uid": "github/hpparvi/MuSCAT2_transit_pipeline", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/MuSCAT2_transit_pipeline"}, {"uid": "github/hpparvi/ldtk", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/ldtk", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/ldtk"}, {"uid": "github/hpparvi/spright", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/spright", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/spright"}, {"uid": "github/radis/radis", "html_url": "https://rseng.github.io/software/repository/github/radis/radis", "api_url": "https://rseng.github.io/software/api/repos/github/radis/radis"}, {"uid": "github/lcpp-org/RustBCA", "html_url": "https://rseng.github.io/software/repository/github/lcpp-org/RustBCA", "api_url": "https://rseng.github.io/software/api/repos/github/lcpp-org/RustBCA"}, {"uid": "github/ppmim/PAPI4K", "html_url": "https://rseng.github.io/software/repository/github/ppmim/PAPI4K", "api_url": "https://rseng.github.io/software/api/repos/github/ppmim/PAPI4K"}, {"uid": "github/SouthGreenPlatform/PyRice", "html_url": "https://rseng.github.io/software/repository/github/SouthGreenPlatform/PyRice", "api_url": "https://rseng.github.io/software/api/repos/github/SouthGreenPlatform/PyRice"}, {"uid": "github/SNEWS2/snewpy", "html_url": "https://rseng.github.io/software/repository/github/SNEWS2/snewpy", "api_url": "https://rseng.github.io/software/api/repos/github/SNEWS2/snewpy"}, {"uid": "github/singularityhub/sregistry", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/sregistry", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/sregistry"}, {"uid": "github/singularityhub/singularity-hpc", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-hpc", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-hpc"}, {"uid": "github/singularityhub/singularity-compose", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-compose", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-compose"}, {"uid": "github/binzhulab/SUITOR", "html_url": "https://rseng.github.io/software/repository/github/binzhulab/SUITOR", "api_url": "https://rseng.github.io/software/api/repos/github/binzhulab/SUITOR"}, {"uid": "github/adammoss/supernovae", "html_url": "https://rseng.github.io/software/repository/github/adammoss/supernovae", "api_url": "https://rseng.github.io/software/api/repos/github/adammoss/supernovae"}, {"uid": "github/IFCA-Advanced-Computing/FAIR_eva", "html_url": "https://rseng.github.io/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", "api_url": "https://rseng.github.io/software/api/repos/github/IFCA-Advanced-Computing/FAIR_eva"}, {"uid": "github/sunpy/sunpy", "html_url": "https://rseng.github.io/software/repository/github/sunpy/sunpy", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/sunpy"}, {"uid": "github/sunpy/ndcube", "html_url": "https://rseng.github.io/software/repository/github/sunpy/ndcube", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/ndcube"}, {"uid": "github/smirarab/sepp", "html_url": "https://rseng.github.io/software/repository/github/smirarab/sepp", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/sepp"}, {"uid": "github/smirarab/pasta", "html_url": "https://rseng.github.io/software/repository/github/smirarab/pasta", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/pasta"}, {"uid": "github/turbo-sim/TurboFlow", "html_url": "https://rseng.github.io/software/repository/github/turbo-sim/TurboFlow", "api_url": "https://rseng.github.io/software/api/repos/github/turbo-sim/TurboFlow"}, {"uid": "github/ahmedmoustafa/JAligner", "html_url": "https://rseng.github.io/software/repository/github/ahmedmoustafa/JAligner", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmoustafa/JAligner"}, {"uid": "github/takafumi291/ESSENCE", "html_url": "https://rseng.github.io/software/repository/github/takafumi291/ESSENCE", "api_url": "https://rseng.github.io/software/api/repos/github/takafumi291/ESSENCE"}, {"uid": "github/pierfied/karmma", "html_url": "https://rseng.github.io/software/repository/github/pierfied/karmma", "api_url": "https://rseng.github.io/software/api/repos/github/pierfied/karmma"}, {"uid": "github/ester-project/ester", "html_url": "https://rseng.github.io/software/repository/github/ester-project/ester", "api_url": "https://rseng.github.io/software/api/repos/github/ester-project/ester"}, {"uid": "github/simd-everywhere/simde", "html_url": "https://rseng.github.io/software/repository/github/simd-everywhere/simde", "api_url": "https://rseng.github.io/software/api/repos/github/simd-everywhere/simde"}, {"uid": "github/weizhouUMICH/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/weizhouUMICH/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/weizhouUMICH/SAIGE"}, {"uid": "github/ChrisBoettner/skaro", "html_url": "https://rseng.github.io/software/repository/github/ChrisBoettner/skaro", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBoettner/skaro"}, {"uid": "github/gnudatalanguage/gdl", "html_url": "https://rseng.github.io/software/repository/github/gnudatalanguage/gdl", "api_url": "https://rseng.github.io/software/api/repos/github/gnudatalanguage/gdl"}, {"uid": "github/dgobbi/vtk-dicom", "html_url": "https://rseng.github.io/software/repository/github/dgobbi/vtk-dicom", "api_url": "https://rseng.github.io/software/api/repos/github/dgobbi/vtk-dicom"}, {"uid": "github/rajeshmondal18/ReionYuga", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/ReionYuga", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/ReionYuga"}, {"uid": "github/rajeshmondal18/MAPS", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/MAPS"}, {"uid": "github/rajeshmondal18/N-body", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/N-body", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/N-body"}, {"uid": "github/rajeshmondal18/DviSukta", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/DviSukta", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/DviSukta"}, {"uid": "github/rajeshmondal18/FoF-Halo-finder", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/FoF-Halo-finder", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/FoF-Halo-finder"}, {"uid": "github/bvalot/pyMLST", "html_url": "https://rseng.github.io/software/repository/github/bvalot/pyMLST", "api_url": "https://rseng.github.io/software/api/repos/github/bvalot/pyMLST"}, {"uid": "github/SciML/DataInterpolations.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/DataInterpolations.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/DataInterpolations.jl"}, {"uid": "github/SciML/GlobalSensitivity.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/GlobalSensitivity.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/GlobalSensitivity.jl"}, {"uid": "github/ci-for-research/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-research/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-research/self-hosted-runners"}, {"uid": "github/OpenMS/OpenMS", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/OpenMS", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/OpenMS"}, {"uid": "github/OpenMS/pyopenms-extra", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/pyopenms-extra", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/pyopenms-extra"}, {"uid": "github/AMReX-Combustion/PeleLMeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Combustion/PeleLMeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Combustion/PeleLMeX"}, {"uid": "github/freebayes/freebayes", "html_url": "https://rseng.github.io/software/repository/github/freebayes/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/freebayes/freebayes"}, {"uid": "github/MichielsenM/FOAM", "html_url": "https://rseng.github.io/software/repository/github/MichielsenM/FOAM", "api_url": "https://rseng.github.io/software/api/repos/github/MichielsenM/FOAM"}, {"uid": "github/babelomics/impuSARS", "html_url": "https://rseng.github.io/software/repository/github/babelomics/impuSARS", "api_url": "https://rseng.github.io/software/api/repos/github/babelomics/impuSARS"}, {"uid": "github/minzastro/unidam", "html_url": "https://rseng.github.io/software/repository/github/minzastro/unidam", "api_url": "https://rseng.github.io/software/api/repos/github/minzastro/unidam"}, {"uid": "github/lnferris/ocean_data_tools", "html_url": "https://rseng.github.io/software/repository/github/lnferris/ocean_data_tools", "api_url": "https://rseng.github.io/software/api/repos/github/lnferris/ocean_data_tools"}, {"uid": "github/markheckmann/OpenRepGrid.ic", "html_url": "https://rseng.github.io/software/repository/github/markheckmann/OpenRepGrid.ic", "api_url": "https://rseng.github.io/software/api/repos/github/markheckmann/OpenRepGrid.ic"}, {"uid": "github/francescodc87/ipaPy2", "html_url": "https://rseng.github.io/software/repository/github/francescodc87/ipaPy2", "api_url": "https://rseng.github.io/software/api/repos/github/francescodc87/ipaPy2"}, {"uid": "github/ec363/fpcountr", "html_url": "https://rseng.github.io/software/repository/github/ec363/fpcountr", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/fpcountr"}, {"uid": "github/ec363/parsleyapp", "html_url": "https://rseng.github.io/software/repository/github/ec363/parsleyapp", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/parsleyapp"}, {"uid": "github/NickSwainston/pulsar_spectra", "html_url": "https://rseng.github.io/software/repository/github/NickSwainston/pulsar_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/NickSwainston/pulsar_spectra"}, {"uid": "github/colour-science/colour", "html_url": "https://rseng.github.io/software/repository/github/colour-science/colour", "api_url": "https://rseng.github.io/software/api/repos/github/colour-science/colour"}, {"uid": "github/esquivas/guacho", "html_url": "https://rseng.github.io/software/repository/github/esquivas/guacho", "api_url": "https://rseng.github.io/software/api/repos/github/esquivas/guacho"}, {"uid": "github/jkimlab/msPIPE", "html_url": "https://rseng.github.io/software/repository/github/jkimlab/msPIPE", "api_url": "https://rseng.github.io/software/api/repos/github/jkimlab/msPIPE"}, {"uid": "github/alexrhowe/APOLLO", "html_url": "https://rseng.github.io/software/repository/github/alexrhowe/APOLLO", "api_url": "https://rseng.github.io/software/api/repos/github/alexrhowe/APOLLO"}, {"uid": "github/exoplanet-dev/celerite2", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/celerite2", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/celerite2"}, {"uid": "github/exoplanet-dev/jaxoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/jaxoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/jaxoplanet"}, {"uid": "github/exoplanet-dev/exoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/exoplanet"}, {"uid": "github/jpcoles/mosaic", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/mosaic"}, {"uid": "github/jpcoles/glass", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/glass", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/glass"}, {"uid": "github/davidharvey1986/pyRRG", "html_url": "https://rseng.github.io/software/repository/github/davidharvey1986/pyRRG", "api_url": "https://rseng.github.io/software/api/repos/github/davidharvey1986/pyRRG"}, {"uid": "github/moead-framework/framework", "html_url": "https://rseng.github.io/software/repository/github/moead-framework/framework", "api_url": "https://rseng.github.io/software/api/repos/github/moead-framework/framework"}, {"uid": "github/KennethEnevoldsen/augmenty", "html_url": "https://rseng.github.io/software/repository/github/KennethEnevoldsen/augmenty", "api_url": "https://rseng.github.io/software/api/repos/github/KennethEnevoldsen/augmenty"}, {"uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", "html_url": "https://rseng.github.io/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Rohit-Kundu/ET-NET_Covid-Detection"}, {"uid": "github/cylammarco/WDPhotTools", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/WDPhotTools", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/WDPhotTools"}, {"uid": "github/cylammarco/ASPIRED", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/ASPIRED", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/ASPIRED"}, {"uid": "github/nlesc-ave/ave-rest-service", "html_url": "https://rseng.github.io/software/repository/github/nlesc-ave/ave-rest-service", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-ave/ave-rest-service"}, {"uid": "github/leirufeng/iEnhancer-DCSV", "html_url": "https://rseng.github.io/software/repository/github/leirufeng/iEnhancer-DCSV", "api_url": "https://rseng.github.io/software/api/repos/github/leirufeng/iEnhancer-DCSV"}, {"uid": "github/SuLab/Wikidata-phenomizer", "html_url": "https://rseng.github.io/software/repository/github/SuLab/Wikidata-phenomizer", "api_url": "https://rseng.github.io/software/api/repos/github/SuLab/Wikidata-phenomizer"}, {"uid": "github/htjb/maxsmooth", "html_url": "https://rseng.github.io/software/repository/github/htjb/maxsmooth", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/maxsmooth"}, {"uid": "github/htjb/margarine", "html_url": "https://rseng.github.io/software/repository/github/htjb/margarine", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/margarine"}, {"uid": "github/htjb/globalemu", "html_url": "https://rseng.github.io/software/repository/github/htjb/globalemu", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/globalemu"}, {"uid": "github/OliverFHD/GPUniverse", "html_url": "https://rseng.github.io/software/repository/github/OliverFHD/GPUniverse", "api_url": "https://rseng.github.io/software/api/repos/github/OliverFHD/GPUniverse"}, {"uid": "github/HIPS/autograd", "html_url": "https://rseng.github.io/software/repository/github/HIPS/autograd", "api_url": "https://rseng.github.io/software/api/repos/github/HIPS/autograd"}, {"uid": "github/yjx1217/RecombineX", "html_url": "https://rseng.github.io/software/repository/github/yjx1217/RecombineX", "api_url": "https://rseng.github.io/software/api/repos/github/yjx1217/RecombineX"}, {"uid": "github/junkoda/sidm-nbody", "html_url": "https://rseng.github.io/software/repository/github/junkoda/sidm-nbody", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/sidm-nbody"}, {"uid": "github/junkoda/cola_halo", "html_url": "https://rseng.github.io/software/repository/github/junkoda/cola_halo", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/cola_halo"}, {"uid": "github/pyomeca/biosiglive", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biosiglive", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biosiglive"}, {"uid": "github/pyomeca/biorbd", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biorbd", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biorbd"}, {"uid": "github/pyomeca/ezc3d", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/ezc3d", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/ezc3d"}, {"uid": "github/occupationMeasurement/occupationMeasurement", "html_url": "https://rseng.github.io/software/repository/github/occupationMeasurement/occupationMeasurement", "api_url": "https://rseng.github.io/software/api/repos/github/occupationMeasurement/occupationMeasurement"}, {"uid": "github/chombo-discharge/chombo-discharge", "html_url": "https://rseng.github.io/software/repository/github/chombo-discharge/chombo-discharge", "api_url": "https://rseng.github.io/software/api/repos/github/chombo-discharge/chombo-discharge"}, {"uid": "github/dsoave/JLS", "html_url": "https://rseng.github.io/software/repository/github/dsoave/JLS", "api_url": "https://rseng.github.io/software/api/repos/github/dsoave/JLS"}, {"uid": "github/DochtermannLab/BehavioralHeritability", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/BehavioralHeritability", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/BehavioralHeritability"}, {"uid": "github/DochtermannLab/G-PopComparison", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/G-PopComparison", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/G-PopComparison"}, {"uid": "github/HenrykHaniewicz/PSRVoid", "html_url": "https://rseng.github.io/software/repository/github/HenrykHaniewicz/PSRVoid", "api_url": "https://rseng.github.io/software/api/repos/github/HenrykHaniewicz/PSRVoid"}, {"uid": "github/Rformassspectrometry/Spectra", "html_url": "https://rseng.github.io/software/repository/github/Rformassspectrometry/Spectra", "api_url": "https://rseng.github.io/software/api/repos/github/Rformassspectrometry/Spectra"}, {"uid": "github/NVlabs/scene_synthesizer", "html_url": "https://rseng.github.io/software/repository/github/NVlabs/scene_synthesizer", "api_url": "https://rseng.github.io/software/api/repos/github/NVlabs/scene_synthesizer"}, {"uid": "github/petigura/terra", "html_url": "https://rseng.github.io/software/repository/github/petigura/terra", "api_url": "https://rseng.github.io/software/api/repos/github/petigura/terra"}, {"uid": "github/Rostlab/ConSurf", "html_url": "https://rseng.github.io/software/repository/github/Rostlab/ConSurf", "api_url": "https://rseng.github.io/software/api/repos/github/Rostlab/ConSurf"}, {"uid": "github/bzrudski/vectorose", "html_url": "https://rseng.github.io/software/repository/github/bzrudski/vectorose", "api_url": "https://rseng.github.io/software/api/repos/github/bzrudski/vectorose"}, {"uid": "github/mroosmalen/nanosv", "html_url": "https://rseng.github.io/software/repository/github/mroosmalen/nanosv", "api_url": "https://rseng.github.io/software/api/repos/github/mroosmalen/nanosv"}, {"uid": "github/kimpenn/VERSE", "html_url": "https://rseng.github.io/software/repository/github/kimpenn/VERSE", "api_url": "https://rseng.github.io/software/api/repos/github/kimpenn/VERSE"}, {"uid": "github/QITI/pySLM2", "html_url": "https://rseng.github.io/software/repository/github/QITI/pySLM2", "api_url": "https://rseng.github.io/software/api/repos/github/QITI/pySLM2"}, {"uid": "github/MarkusPic/intensity_duration_frequency_analysis", "html_url": "https://rseng.github.io/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/MarkusPic/intensity_duration_frequency_analysis"}, {"uid": "github/quantum-exeter/SpiDy.jl", "html_url": "https://rseng.github.io/software/repository/github/quantum-exeter/SpiDy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/quantum-exeter/SpiDy.jl"}, {"uid": "github/GeoffDuniam/FITS-Code-Examples", "html_url": "https://rseng.github.io/software/repository/github/GeoffDuniam/FITS-Code-Examples", "api_url": "https://rseng.github.io/software/api/repos/github/GeoffDuniam/FITS-Code-Examples"}, {"uid": "github/multiwavelength/gleam", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/gleam", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/gleam"}, {"uid": "github/multiwavelength/redshifts", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/redshifts", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/redshifts"}, {"uid": "github/meenakshi-kushwaha/mmaqshiny", "html_url": "https://rseng.github.io/software/repository/github/meenakshi-kushwaha/mmaqshiny", "api_url": "https://rseng.github.io/software/api/repos/github/meenakshi-kushwaha/mmaqshiny"}, {"uid": "github/atmos-cloud-sim-uj/PyMPDATA", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PyMPDATA"}, {"uid": "github/atmos-cloud-sim-uj/PySDM", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PySDM", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PySDM"}, {"uid": "github/artefactory/choice-learn", "html_url": "https://rseng.github.io/software/repository/github/artefactory/choice-learn", "api_url": "https://rseng.github.io/software/api/repos/github/artefactory/choice-learn"}, {"uid": "github/RJArthern/WAVI.jl", "html_url": "https://rseng.github.io/software/repository/github/RJArthern/WAVI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RJArthern/WAVI.jl"}, {"uid": "github/SietzeN/glottospace", "html_url": "https://rseng.github.io/software/repository/github/SietzeN/glottospace", "api_url": "https://rseng.github.io/software/api/repos/github/SietzeN/glottospace"}, {"uid": "github/levitsky/pyteomics", "html_url": "https://rseng.github.io/software/repository/github/levitsky/pyteomics", "api_url": "https://rseng.github.io/software/api/repos/github/levitsky/pyteomics"}, {"uid": "github/astrockragh/Mangrove", "html_url": "https://rseng.github.io/software/repository/github/astrockragh/Mangrove", "api_url": "https://rseng.github.io/software/api/repos/github/astrockragh/Mangrove"}, {"uid": "github/henrikju/resolve", "html_url": "https://rseng.github.io/software/repository/github/henrikju/resolve", "api_url": "https://rseng.github.io/software/api/repos/github/henrikju/resolve"}, {"uid": "github/mkargo/pipeline", "html_url": "https://rseng.github.io/software/repository/github/mkargo/pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mkargo/pipeline"}, {"uid": "github/funkyheatmap/funkyheatmap", "html_url": "https://rseng.github.io/software/repository/github/funkyheatmap/funkyheatmap", "api_url": "https://rseng.github.io/software/api/repos/github/funkyheatmap/funkyheatmap"}, {"uid": "github/klevis-a/kinematics-vis", "html_url": "https://rseng.github.io/software/repository/github/klevis-a/kinematics-vis", "api_url": "https://rseng.github.io/software/api/repos/github/klevis-a/kinematics-vis"}, {"uid": "github/fabiopardo/qmap", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/qmap", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/qmap"}, {"uid": "github/fabiopardo/tonic", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/tonic", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/tonic"}, {"uid": "github/djbard/ccogs", "html_url": "https://rseng.github.io/software/repository/github/djbard/ccogs", "api_url": "https://rseng.github.io/software/api/repos/github/djbard/ccogs"}, {"uid": "github/danhey/maelstrom", "html_url": "https://rseng.github.io/software/repository/github/danhey/maelstrom", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/maelstrom"}, {"uid": "github/danhey/echelle", "html_url": "https://rseng.github.io/software/repository/github/danhey/echelle", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/echelle"}, {"uid": "github/michalychforever/CLASS-PT", "html_url": "https://rseng.github.io/software/repository/github/michalychforever/CLASS-PT", "api_url": "https://rseng.github.io/software/api/repos/github/michalychforever/CLASS-PT"}, {"uid": "github/LoganAMorrison/Hazma", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/Hazma", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/Hazma"}, {"uid": "github/LoganAMorrison/blackthorn", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/blackthorn", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/blackthorn"}, {"uid": "github/online-behaviour/find-journalists", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/find-journalists", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/find-journalists"}, {"uid": "github/online-behaviour/machine-learning", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/machine-learning", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/machine-learning"}, {"uid": "github/yymao/abundancematching", "html_url": "https://rseng.github.io/software/repository/github/yymao/abundancematching", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/abundancematching"}, {"uid": "github/yymao/adstex", "html_url": "https://rseng.github.io/software/repository/github/yymao/adstex", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/adstex"}, {"uid": "github/bauer-alex/fuzzyclara", "html_url": "https://rseng.github.io/software/repository/github/bauer-alex/fuzzyclara", "api_url": "https://rseng.github.io/software/api/repos/github/bauer-alex/fuzzyclara"}, {"uid": "github/napakalas/casbert", "html_url": "https://rseng.github.io/software/repository/github/napakalas/casbert", "api_url": "https://rseng.github.io/software/api/repos/github/napakalas/casbert"}, {"uid": "github/eaobservatory/jcmt_coadd", "html_url": "https://rseng.github.io/software/repository/github/eaobservatory/jcmt_coadd", "api_url": "https://rseng.github.io/software/api/repos/github/eaobservatory/jcmt_coadd"}, {"uid": "github/bcgov/bcdata", "html_url": "https://rseng.github.io/software/repository/github/bcgov/bcdata", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/bcdata"}, {"uid": "github/bcgov/shinyssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/shinyssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/shinyssdtools"}, {"uid": "github/bcgov/ssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/ssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/ssdtools"}, {"uid": "github/danielacarrasco/GLACiAR", "html_url": "https://rseng.github.io/software/repository/github/danielacarrasco/GLACiAR", "api_url": "https://rseng.github.io/software/api/repos/github/danielacarrasco/GLACiAR"}, {"uid": "github/Autostronomy/AstroPhot", "html_url": "https://rseng.github.io/software/repository/github/Autostronomy/AstroPhot", "api_url": "https://rseng.github.io/software/api/repos/github/Autostronomy/AstroPhot"}, {"uid": "github/drwaseemsheikh/audiometry", "html_url": "https://rseng.github.io/software/repository/github/drwaseemsheikh/audiometry", "api_url": "https://rseng.github.io/software/api/repos/github/drwaseemsheikh/audiometry"}, {"uid": "github/collinlewin/STELA-Toolkit", "html_url": "https://rseng.github.io/software/repository/github/collinlewin/STELA-Toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/collinlewin/STELA-Toolkit"}, {"uid": "github/csiro-risk-assessment/mozzie", "html_url": "https://rseng.github.io/software/repository/github/csiro-risk-assessment/mozzie", "api_url": "https://rseng.github.io/software/api/repos/github/csiro-risk-assessment/mozzie"}, {"uid": "github/PennyLaneAI/catalyst", "html_url": "https://rseng.github.io/software/repository/github/PennyLaneAI/catalyst", "api_url": "https://rseng.github.io/software/api/repos/github/PennyLaneAI/catalyst"}, {"uid": "github/FrederickHuangLin/ANCOMBC", "html_url": "https://rseng.github.io/software/repository/github/FrederickHuangLin/ANCOMBC", "api_url": "https://rseng.github.io/software/api/repos/github/FrederickHuangLin/ANCOMBC"}, {"uid": "github/antonpannekoek/sunbather", "html_url": "https://rseng.github.io/software/repository/github/antonpannekoek/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/antonpannekoek/sunbather"}, {"uid": "github/jbuisine/macop", "html_url": "https://rseng.github.io/software/repository/github/jbuisine/macop", "api_url": "https://rseng.github.io/software/api/repos/github/jbuisine/macop"}, {"uid": "github/alex-b-davis/gubas", "html_url": "https://rseng.github.io/software/repository/github/alex-b-davis/gubas", "api_url": "https://rseng.github.io/software/api/repos/github/alex-b-davis/gubas"}, {"uid": "github/rgcgithub/regenie", "html_url": "https://rseng.github.io/software/repository/github/rgcgithub/regenie", "api_url": "https://rseng.github.io/software/api/repos/github/rgcgithub/regenie"}, {"uid": "github/castro-gzlz/TESS-cont", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/TESS-cont", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/TESS-cont"}, {"uid": "github/castro-gzlz/mr-plotter", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/mr-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/mr-plotter"}, {"uid": "github/JungleComputing/rocket", "html_url": "https://rseng.github.io/software/repository/github/JungleComputing/rocket", "api_url": "https://rseng.github.io/software/api/repos/github/JungleComputing/rocket"}, {"uid": "github/UTEL-UIUC/gtfs_segments", "html_url": "https://rseng.github.io/software/repository/github/UTEL-UIUC/gtfs_segments", "api_url": "https://rseng.github.io/software/api/repos/github/UTEL-UIUC/gtfs_segments"}, {"uid": "github/SoSongzhi/PVGA", "html_url": "https://rseng.github.io/software/repository/github/SoSongzhi/PVGA", "api_url": "https://rseng.github.io/software/api/repos/github/SoSongzhi/PVGA"}, {"uid": "github/ebachelet/pyLIMA", "html_url": "https://rseng.github.io/software/repository/github/ebachelet/pyLIMA", "api_url": "https://rseng.github.io/software/api/repos/github/ebachelet/pyLIMA"}, {"uid": "github/OSS-Lab/ChemChaste", "html_url": "https://rseng.github.io/software/repository/github/OSS-Lab/ChemChaste", "api_url": "https://rseng.github.io/software/api/repos/github/OSS-Lab/ChemChaste"}, {"uid": "github/fredstro/hilbertmodgroup", "html_url": "https://rseng.github.io/software/repository/github/fredstro/hilbertmodgroup", "api_url": "https://rseng.github.io/software/api/repos/github/fredstro/hilbertmodgroup"}, {"uid": "github/mjacob1002/Eir", "html_url": "https://rseng.github.io/software/repository/github/mjacob1002/Eir", "api_url": "https://rseng.github.io/software/api/repos/github/mjacob1002/Eir"}, {"uid": "github/grburgess/ronswanson", "html_url": "https://rseng.github.io/software/repository/github/grburgess/ronswanson", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/ronswanson"}, {"uid": "github/grburgess/pynchrotron", "html_url": "https://rseng.github.io/software/repository/github/grburgess/pynchrotron", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/pynchrotron"}, {"uid": "github/grburgess/nazgul", "html_url": "https://rseng.github.io/software/repository/github/grburgess/nazgul", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/nazgul"}, {"uid": "github/grburgess/polarpy", "html_url": "https://rseng.github.io/software/repository/github/grburgess/polarpy", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/polarpy"}, {"uid": "github/grburgess/popsynth", "html_url": "https://rseng.github.io/software/repository/github/grburgess/popsynth", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/popsynth"}, {"uid": "github/me-manu/gammaALPs", "html_url": "https://rseng.github.io/software/repository/github/me-manu/gammaALPs", "api_url": "https://rseng.github.io/software/api/repos/github/me-manu/gammaALPs"}, {"uid": "github/UgoLomoio/gtex_visualizer", "html_url": "https://rseng.github.io/software/repository/github/UgoLomoio/gtex_visualizer", "api_url": "https://rseng.github.io/software/api/repos/github/UgoLomoio/gtex_visualizer"}, {"uid": "github/ryneches/SuchTree", "html_url": "https://rseng.github.io/software/repository/github/ryneches/SuchTree", "api_url": "https://rseng.github.io/software/api/repos/github/ryneches/SuchTree"}, {"uid": "github/xfcui/onn4arg", "html_url": "https://rseng.github.io/software/repository/github/xfcui/onn4arg", "api_url": "https://rseng.github.io/software/api/repos/github/xfcui/onn4arg"}, {"uid": "github/lauralwatkins/cjam", "html_url": "https://rseng.github.io/software/repository/github/lauralwatkins/cjam", "api_url": "https://rseng.github.io/software/api/repos/github/lauralwatkins/cjam"}, {"uid": "github/gevaertlab/DUNE", "html_url": "https://rseng.github.io/software/repository/github/gevaertlab/DUNE", "api_url": "https://rseng.github.io/software/api/repos/github/gevaertlab/DUNE"}, {"uid": "github/moustakas/iSEDfit", "html_url": "https://rseng.github.io/software/repository/github/moustakas/iSEDfit", "api_url": "https://rseng.github.io/software/api/repos/github/moustakas/iSEDfit"}, {"uid": "github/ThomasMBury/ewstools", "html_url": "https://rseng.github.io/software/repository/github/ThomasMBury/ewstools", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasMBury/ewstools"}, {"uid": "github/manodeep/Corrfunc", "html_url": "https://rseng.github.io/software/repository/github/manodeep/Corrfunc", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/Corrfunc"}, {"uid": "github/manodeep/TesseRACt", "html_url": "https://rseng.github.io/software/repository/github/manodeep/TesseRACt", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/TesseRACt"}, {"uid": "github/haowenz/chromap", "html_url": "https://rseng.github.io/software/repository/github/haowenz/chromap", "api_url": "https://rseng.github.io/software/api/repos/github/haowenz/chromap"}, {"uid": "github/gwastro/pycbc", "html_url": "https://rseng.github.io/software/repository/github/gwastro/pycbc", "api_url": "https://rseng.github.io/software/api/repos/github/gwastro/pycbc"}, {"uid": "github/wmglab-duke/ascent", "html_url": "https://rseng.github.io/software/repository/github/wmglab-duke/ascent", "api_url": "https://rseng.github.io/software/api/repos/github/wmglab-duke/ascent"}, {"uid": "github/forrest-lab/scMatch", "html_url": "https://rseng.github.io/software/repository/github/forrest-lab/scMatch", "api_url": "https://rseng.github.io/software/api/repos/github/forrest-lab/scMatch"}, {"uid": "github/bmoster/emerge", "html_url": "https://rseng.github.io/software/repository/github/bmoster/emerge", "api_url": "https://rseng.github.io/software/api/repos/github/bmoster/emerge"}, {"uid": "github/Michalychforever/CLASS_LVDM", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/CLASS_LVDM", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/CLASS_LVDM"}, {"uid": "github/Michalychforever/AsPy", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/AsPy", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/AsPy"}, {"uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "html_url": "https://rseng.github.io/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "api_url": "https://rseng.github.io/software/api/repos/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset"}, {"uid": "github/gvilitechltd/LibSWIFFT", "html_url": "https://rseng.github.io/software/repository/github/gvilitechltd/LibSWIFFT", "api_url": "https://rseng.github.io/software/api/repos/github/gvilitechltd/LibSWIFFT"}, {"uid": "github/Ompha/CLUES", "html_url": "https://rseng.github.io/software/repository/github/Ompha/CLUES", "api_url": "https://rseng.github.io/software/api/repos/github/Ompha/CLUES"}, {"uid": "github/storyofthewolf/ExoRT", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoRT", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoRT"}, {"uid": "github/storyofthewolf/ExoCAM", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoCAM", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoCAM"}, {"uid": "github/VSPEC-collab/VSPEC", "html_url": "https://rseng.github.io/software/repository/github/VSPEC-collab/VSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/VSPEC-collab/VSPEC"}, {"uid": "github/Crick-CancerGenomics/ascat", "html_url": "https://rseng.github.io/software/repository/github/Crick-CancerGenomics/ascat", "api_url": "https://rseng.github.io/software/api/repos/github/Crick-CancerGenomics/ascat"}, {"uid": "github/justyncw/STAR_MELT", "html_url": "https://rseng.github.io/software/repository/github/justyncw/STAR_MELT", "api_url": "https://rseng.github.io/software/api/repos/github/justyncw/STAR_MELT"}, {"uid": "github/nnssa/gallumi_public", "html_url": "https://rseng.github.io/software/repository/github/nnssa/gallumi_public", "api_url": "https://rseng.github.io/software/api/repos/github/nnssa/gallumi_public"}, {"uid": "github/stinefm/relsad", "html_url": "https://rseng.github.io/software/repository/github/stinefm/relsad", "api_url": "https://rseng.github.io/software/api/repos/github/stinefm/relsad"}, {"uid": "github/autotwin/automesh", "html_url": "https://rseng.github.io/software/repository/github/autotwin/automesh", "api_url": "https://rseng.github.io/software/api/repos/github/autotwin/automesh"}, {"uid": "github/astronomical-data-processing/RAPP", "html_url": "https://rseng.github.io/software/repository/github/astronomical-data-processing/RAPP", "api_url": "https://rseng.github.io/software/api/repos/github/astronomical-data-processing/RAPP"}, {"uid": "github/davidaknowles/leafcutter", "html_url": "https://rseng.github.io/software/repository/github/davidaknowles/leafcutter", "api_url": "https://rseng.github.io/software/api/repos/github/davidaknowles/leafcutter"}, {"uid": "github/anwarbio/bioassays", "html_url": "https://rseng.github.io/software/repository/github/anwarbio/bioassays", "api_url": "https://rseng.github.io/software/api/repos/github/anwarbio/bioassays"}, {"uid": "github/IanevskiAleksandr/sc-type", "html_url": "https://rseng.github.io/software/repository/github/IanevskiAleksandr/sc-type", "api_url": "https://rseng.github.io/software/api/repos/github/IanevskiAleksandr/sc-type"}, {"uid": "github/coccoinomane/zelda", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/zelda", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/zelda"}, {"uid": "github/coccoinomane/song", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/song", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/song"}, {"uid": "github/iipharma/pharmamind-molminer", "html_url": "https://rseng.github.io/software/repository/github/iipharma/pharmamind-molminer", "api_url": "https://rseng.github.io/software/api/repos/github/iipharma/pharmamind-molminer"}, {"uid": "github/sys-bio/ratesb_python", "html_url": "https://rseng.github.io/software/repository/github/sys-bio/ratesb_python", "api_url": "https://rseng.github.io/software/api/repos/github/sys-bio/ratesb_python"}, {"uid": "github/kdeck/TTVFast", "html_url": "https://rseng.github.io/software/repository/github/kdeck/TTVFast", "api_url": "https://rseng.github.io/software/api/repos/github/kdeck/TTVFast"}, {"uid": "github/QuaCaTeam/quaca", "html_url": "https://rseng.github.io/software/repository/github/QuaCaTeam/quaca", "api_url": "https://rseng.github.io/software/api/repos/github/QuaCaTeam/quaca"}, {"uid": "github/Goobley/Radynversion", "html_url": "https://rseng.github.io/software/repository/github/Goobley/Radynversion", "api_url": "https://rseng.github.io/software/api/repos/github/Goobley/Radynversion"}, {"uid": "github/light-curve/light-curve-python", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve-python", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve-python"}, {"uid": "github/light-curve/light-curve", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve"}, {"uid": "github/marschall-lab/panacus", "html_url": "https://rseng.github.io/software/repository/github/marschall-lab/panacus", "api_url": "https://rseng.github.io/software/api/repos/github/marschall-lab/panacus"}, {"uid": "github/biosimulations/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/biosimulations/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/biosimulations/Biosimulations"}, {"uid": "github/ruanjue/wtdbg2", "html_url": "https://rseng.github.io/software/repository/github/ruanjue/wtdbg2", "api_url": "https://rseng.github.io/software/api/repos/github/ruanjue/wtdbg2"}, {"uid": "github/JanCBrammer/biopeaks", "html_url": "https://rseng.github.io/software/repository/github/JanCBrammer/biopeaks", "api_url": "https://rseng.github.io/software/api/repos/github/JanCBrammer/biopeaks"}, {"uid": "github/henrycousins/gspa", "html_url": "https://rseng.github.io/software/repository/github/henrycousins/gspa", "api_url": "https://rseng.github.io/software/api/repos/github/henrycousins/gspa"}, {"uid": "github/ChileanVirtualObservatory/indexing_utfsm", "html_url": "https://rseng.github.io/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", "api_url": "https://rseng.github.io/software/api/repos/github/ChileanVirtualObservatory/indexing_utfsm"}, {"uid": "github/fzagaria/COpops", "html_url": "https://rseng.github.io/software/repository/github/fzagaria/COpops", "api_url": "https://rseng.github.io/software/api/repos/github/fzagaria/COpops"}, {"uid": "github/CNIC-Proteomics/TurboPutative-web", "html_url": "https://rseng.github.io/software/repository/github/CNIC-Proteomics/TurboPutative-web", "api_url": "https://rseng.github.io/software/api/repos/github/CNIC-Proteomics/TurboPutative-web"}, {"uid": "github/mikegrudic/MakeCloud", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/MakeCloud", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/MakeCloud"}, {"uid": "github/mikegrudic/pytreegrav", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/pytreegrav", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/pytreegrav"}, {"uid": "github/moritzobenauer/ProjectRaccoon", "html_url": "https://rseng.github.io/software/repository/github/moritzobenauer/ProjectRaccoon", "api_url": "https://rseng.github.io/software/api/repos/github/moritzobenauer/ProjectRaccoon"}, {"uid": "github/EoRImaging/FHD", "html_url": "https://rseng.github.io/software/repository/github/EoRImaging/FHD", "api_url": "https://rseng.github.io/software/api/repos/github/EoRImaging/FHD"}, {"uid": "github/Julian/jsonschema", "html_url": "https://rseng.github.io/software/repository/github/Julian/jsonschema", "api_url": "https://rseng.github.io/software/api/repos/github/Julian/jsonschema"}, {"uid": "github/BioComputingUP/ring-pymol", "html_url": "https://rseng.github.io/software/repository/github/BioComputingUP/ring-pymol", "api_url": "https://rseng.github.io/software/api/repos/github/BioComputingUP/ring-pymol"}, {"uid": "github/CheerfulUser/starkiller", "html_url": "https://rseng.github.io/software/repository/github/CheerfulUser/starkiller", "api_url": "https://rseng.github.io/software/api/repos/github/CheerfulUser/starkiller"}, {"uid": "github/arielmission-space/ExoSim2-public", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/ExoSim2-public", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/ExoSim2-public"}, {"uid": "github/arielmission-space/PAOS", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/PAOS", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/PAOS"}, {"uid": "github/rformassspectrometry/SpectriPy", "html_url": "https://rseng.github.io/software/repository/github/rformassspectrometry/SpectriPy", "api_url": "https://rseng.github.io/software/api/repos/github/rformassspectrometry/SpectriPy"}, {"uid": "github/zhangyk8/sconce-scms", "html_url": "https://rseng.github.io/software/repository/github/zhangyk8/sconce-scms", "api_url": "https://rseng.github.io/software/api/repos/github/zhangyk8/sconce-scms"}, {"uid": "github/ypmen/PulsarX", "html_url": "https://rseng.github.io/software/repository/github/ypmen/PulsarX", "api_url": "https://rseng.github.io/software/api/repos/github/ypmen/PulsarX"}, {"uid": "github/ssadedin/bazam", "html_url": "https://rseng.github.io/software/repository/github/ssadedin/bazam", "api_url": "https://rseng.github.io/software/api/repos/github/ssadedin/bazam"}, {"uid": "github/JanLeppert/GasChromatographySimulator.jl", "html_url": "https://rseng.github.io/software/repository/github/JanLeppert/GasChromatographySimulator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JanLeppert/GasChromatographySimulator.jl"}, {"uid": "github/pyamg/pyamg", "html_url": "https://rseng.github.io/software/repository/github/pyamg/pyamg", "api_url": "https://rseng.github.io/software/api/repos/github/pyamg/pyamg"}, {"uid": "github/steineggerlab/foldmason", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldmason", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldmason"}, {"uid": "github/steineggerlab/foldseek", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldseek", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldseek"}, {"uid": "github/abs2k12/COCOA", "html_url": "https://rseng.github.io/software/repository/github/abs2k12/COCOA", "api_url": "https://rseng.github.io/software/api/repos/github/abs2k12/COCOA"}, {"uid": "github/LiyrAstroph/PyCALI", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PyCALI", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PyCALI"}, {"uid": "github/LiyrAstroph/RECON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/RECON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/RECON"}, {"uid": "github/LiyrAstroph/BRAINS", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/BRAINS", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/BRAINS"}, {"uid": "github/LiyrAstroph/PIXON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PIXON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PIXON"}, {"uid": "github/kitokamada/QUIDS", "html_url": "https://rseng.github.io/software/repository/github/kitokamada/QUIDS", "api_url": "https://rseng.github.io/software/api/repos/github/kitokamada/QUIDS"}, {"uid": "github/PyTorchLightning/metrics", "html_url": "https://rseng.github.io/software/repository/github/PyTorchLightning/metrics", "api_url": "https://rseng.github.io/software/api/repos/github/PyTorchLightning/metrics"}, {"uid": "github/jonaselgammal/GPry", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/GPry", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/GPry"}, {"uid": "github/jonaselgammal/SIGWAY", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/SIGWAY", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/SIGWAY"}, {"uid": "github/slimgroup/InvertibleNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/slimgroup/InvertibleNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/slimgroup/InvertibleNetworks.jl"}, {"uid": "github/Maison-de-la-Simulation/heraclespp", "html_url": "https://rseng.github.io/software/repository/github/Maison-de-la-Simulation/heraclespp", "api_url": "https://rseng.github.io/software/api/repos/github/Maison-de-la-Simulation/heraclespp"}, {"uid": "github/SpeedyWeather/SpeedyWeather.jl", "html_url": "https://rseng.github.io/software/repository/github/SpeedyWeather/SpeedyWeather.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SpeedyWeather/SpeedyWeather.jl"}, {"uid": "github/karllark/DIRTY_dustrt", "html_url": "https://rseng.github.io/software/repository/github/karllark/DIRTY_dustrt", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/DIRTY_dustrt"}, {"uid": "github/karllark/measure_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/measure_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/measure_extinction"}, {"uid": "github/karllark/dust_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/dust_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/dust_extinction"}, {"uid": "github/dentalfloss1/transients-simulations", "html_url": "https://rseng.github.io/software/repository/github/dentalfloss1/transients-simulations", "api_url": "https://rseng.github.io/software/api/repos/github/dentalfloss1/transients-simulations"}, {"uid": "github/mib-unitn/SoFT", "html_url": "https://rseng.github.io/software/repository/github/mib-unitn/SoFT", "api_url": "https://rseng.github.io/software/api/repos/github/mib-unitn/SoFT"}, {"uid": "github/ArenA-Crowds/Crowds", "html_url": "https://rseng.github.io/software/repository/github/ArenA-Crowds/Crowds", "api_url": "https://rseng.github.io/software/api/repos/github/ArenA-Crowds/Crowds"}, {"uid": "github/JinxinMonash/PhageGE", "html_url": "https://rseng.github.io/software/repository/github/JinxinMonash/PhageGE", "api_url": "https://rseng.github.io/software/api/repos/github/JinxinMonash/PhageGE"}, {"uid": "github/rochoa85/NTDHealth_Forms", "html_url": "https://rseng.github.io/software/repository/github/rochoa85/NTDHealth_Forms", "api_url": "https://rseng.github.io/software/api/repos/github/rochoa85/NTDHealth_Forms"}, {"uid": "github/CliMA/CalibrateEmulateSample.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/CalibrateEmulateSample.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/CalibrateEmulateSample.jl"}, {"uid": "github/CliMA/EnsembleKalmanProcesses.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/EnsembleKalmanProcesses.jl"}, {"uid": "github/lzx325/DeeReCT-APA-repo", "html_url": "https://rseng.github.io/software/repository/github/lzx325/DeeReCT-APA-repo", "api_url": "https://rseng.github.io/software/api/repos/github/lzx325/DeeReCT-APA-repo"}, {"uid": "github/snad-space/ztf-viewer", "html_url": "https://rseng.github.io/software/repository/github/snad-space/ztf-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/ztf-viewer"}, {"uid": "github/snad-space/coniferest", "html_url": "https://rseng.github.io/software/repository/github/snad-space/coniferest", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/coniferest"}, {"uid": "github/snad-space/zwad", "html_url": "https://rseng.github.io/software/repository/github/snad-space/zwad", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/zwad"}, {"uid": "github/Health-RI/img2catalog", "html_url": "https://rseng.github.io/software/repository/github/Health-RI/img2catalog", "api_url": "https://rseng.github.io/software/api/repos/github/Health-RI/img2catalog"}, {"uid": "github/INCEPTdk/adaptr", "html_url": "https://rseng.github.io/software/repository/github/INCEPTdk/adaptr", "api_url": "https://rseng.github.io/software/api/repos/github/INCEPTdk/adaptr"}, {"uid": "github/McPHAC/McPHAC", "html_url": "https://rseng.github.io/software/repository/github/McPHAC/McPHAC", "api_url": "https://rseng.github.io/software/api/repos/github/McPHAC/McPHAC"}, {"uid": "github/csinva/imodels", "html_url": "https://rseng.github.io/software/repository/github/csinva/imodels", "api_url": "https://rseng.github.io/software/api/repos/github/csinva/imodels"}, {"uid": "github/DataBiosphere/wdl-parsers", "html_url": "https://rseng.github.io/software/repository/github/DataBiosphere/wdl-parsers", "api_url": "https://rseng.github.io/software/api/repos/github/DataBiosphere/wdl-parsers"}, {"uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", "html_url": "https://rseng.github.io/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", "api_url": "https://rseng.github.io/software/api/repos/github/uaf-arctic-eco-modeling/dvm-dos-tem"}, {"uid": "github/magnuspalmblad/averageRegions", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/averageRegions", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/averageRegions"}, {"uid": "github/magnuspalmblad/shic", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/shic", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/shic"}, {"uid": "github/magnuspalmblad/navpa", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/navpa", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/navpa"}, {"uid": "github/magnuspalmblad/addFeatures", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/addFeatures", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/addFeatures"}, {"uid": "github/dawolfgang/MRrelation", "html_url": "https://rseng.github.io/software/repository/github/dawolfgang/MRrelation", "api_url": "https://rseng.github.io/software/api/repos/github/dawolfgang/MRrelation"}, {"uid": "github/klebgenomics/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/klebgenomics/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/klebgenomics/Kleborate"}, {"uid": "github/bruce-chappell/SunnyNet", "html_url": "https://rseng.github.io/software/repository/github/bruce-chappell/SunnyNet", "api_url": "https://rseng.github.io/software/api/repos/github/bruce-chappell/SunnyNet"}, {"uid": "github/kdmurray91/libqes", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqes", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqes"}, {"uid": "github/kdmurray91/libqcpp", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqcpp", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqcpp"}, {"uid": "github/kdmurray91/axe", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/axe", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/axe"}, {"uid": "github/williamjameshandley/fgivenx", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/fgivenx", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/fgivenx"}, {"uid": "github/williamjameshandley/anesthetic", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/anesthetic", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/anesthetic"}, {"uid": "github/PeterKamphuis/FAT", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/FAT", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/FAT"}, {"uid": "github/PeterKamphuis/pyFAT-astro", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/pyFAT-astro", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/pyFAT-astro"}, {"uid": "github/BrockWW/BubbleFindingAlgorithm", "html_url": "https://rseng.github.io/software/repository/github/BrockWW/BubbleFindingAlgorithm", "api_url": "https://rseng.github.io/software/api/repos/github/BrockWW/BubbleFindingAlgorithm"}, {"uid": "github/kotekan/kotekan", "html_url": "https://rseng.github.io/software/repository/github/kotekan/kotekan", "api_url": "https://rseng.github.io/software/api/repos/github/kotekan/kotekan"}, {"uid": "github/Dfam-consortium/RepeatModeler", "html_url": "https://rseng.github.io/software/repository/github/Dfam-consortium/RepeatModeler", "api_url": "https://rseng.github.io/software/api/repos/github/Dfam-consortium/RepeatModeler"}, {"uid": "github/jeffcsauer/arcos_arcospy_information", "html_url": "https://rseng.github.io/software/repository/github/jeffcsauer/arcos_arcospy_information", "api_url": "https://rseng.github.io/software/api/repos/github/jeffcsauer/arcos_arcospy_information"}, {"uid": "github/asgr/ProFuse", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFuse", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFuse"}, {"uid": "github/asgr/hyper.fit", "html_url": "https://rseng.github.io/software/repository/github/asgr/hyper.fit", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/hyper.fit"}, {"uid": "github/asgr/Rwcs", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rwcs", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rwcs"}, {"uid": "github/asgr/ProPane", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProPane", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProPane"}, {"uid": "github/asgr/ProSpect", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProSpect", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProSpect"}, {"uid": "github/asgr/celestial", "html_url": "https://rseng.github.io/software/repository/github/asgr/celestial", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/celestial"}, {"uid": "github/asgr/ProFound", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFound", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFound"}, {"uid": "github/asgr/NFWdist", "html_url": "https://rseng.github.io/software/repository/github/asgr/NFWdist", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/NFWdist"}, {"uid": "github/asgr/Rfits", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rfits", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rfits"}, {"uid": "github/jpahlers/LASR", "html_url": "https://rseng.github.io/software/repository/github/jpahlers/LASR", "api_url": "https://rseng.github.io/software/api/repos/github/jpahlers/LASR"}, {"uid": "github/openCARP-org/FACILE-RS", "html_url": "https://rseng.github.io/software/repository/github/openCARP-org/FACILE-RS", "api_url": "https://rseng.github.io/software/api/repos/github/openCARP-org/FACILE-RS"}, {"uid": "github/KolmogorovLab/Severus", "html_url": "https://rseng.github.io/software/repository/github/KolmogorovLab/Severus", "api_url": "https://rseng.github.io/software/api/repos/github/KolmogorovLab/Severus"}, {"uid": "github/pmeier/pystiche", "html_url": "https://rseng.github.io/software/repository/github/pmeier/pystiche", "api_url": "https://rseng.github.io/software/api/repos/github/pmeier/pystiche"}, {"uid": "github/torognes/swarm", "html_url": "https://rseng.github.io/software/repository/github/torognes/swarm", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/swarm"}, {"uid": "github/torognes/vsearch", "html_url": "https://rseng.github.io/software/repository/github/torognes/vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/vsearch"}, {"uid": "github/2decomp-fft/2decomp-fft", "html_url": "https://rseng.github.io/software/repository/github/2decomp-fft/2decomp-fft", "api_url": "https://rseng.github.io/software/api/repos/github/2decomp-fft/2decomp-fft"}, {"uid": "github/flintproject/Flint", "html_url": "https://rseng.github.io/software/repository/github/flintproject/Flint", "api_url": "https://rseng.github.io/software/api/repos/github/flintproject/Flint"}, {"uid": "github/benyhh/ml-telescope-pointing-correction", "html_url": "https://rseng.github.io/software/repository/github/benyhh/ml-telescope-pointing-correction", "api_url": "https://rseng.github.io/software/api/repos/github/benyhh/ml-telescope-pointing-correction"}, {"uid": "github/aobr/gsf", "html_url": "https://rseng.github.io/software/repository/github/aobr/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/aobr/gsf"}, {"uid": "github/BiomedSciAI/fuse-med-ml", "html_url": "https://rseng.github.io/software/repository/github/BiomedSciAI/fuse-med-ml", "api_url": "https://rseng.github.io/software/api/repos/github/BiomedSciAI/fuse-med-ml"}, {"uid": "github/mrline/CHIMERA", "html_url": "https://rseng.github.io/software/repository/github/mrline/CHIMERA", "api_url": "https://rseng.github.io/software/api/repos/github/mrline/CHIMERA"}, {"uid": "github/liamedeiros/ehtplot", "html_url": "https://rseng.github.io/software/repository/github/liamedeiros/ehtplot", "api_url": "https://rseng.github.io/software/api/repos/github/liamedeiros/ehtplot"}, {"uid": "github/nye17/javelin", "html_url": "https://rseng.github.io/software/repository/github/nye17/javelin", "api_url": "https://rseng.github.io/software/api/repos/github/nye17/javelin"}, {"uid": "github/gdefazio/kMetaShot", "html_url": "https://rseng.github.io/software/repository/github/gdefazio/kMetaShot", "api_url": "https://rseng.github.io/software/api/repos/github/gdefazio/kMetaShot"}, {"uid": "github/hera-team/librarian", "html_url": "https://rseng.github.io/software/repository/github/hera-team/librarian", "api_url": "https://rseng.github.io/software/api/repos/github/hera-team/librarian"}, {"uid": "github/chandra-marx/marxs", "html_url": "https://rseng.github.io/software/repository/github/chandra-marx/marxs", "api_url": "https://rseng.github.io/software/api/repos/github/chandra-marx/marxs"}, {"uid": "github/mlegr/EqualISER", "html_url": "https://rseng.github.io/software/repository/github/mlegr/EqualISER", "api_url": "https://rseng.github.io/software/api/repos/github/mlegr/EqualISER"}, {"uid": "github/BioSTEAMDevelopmentGroup/thermosteam", "html_url": "https://rseng.github.io/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", "api_url": "https://rseng.github.io/software/api/repos/github/BioSTEAMDevelopmentGroup/thermosteam"}, {"uid": "github/opengenomebrowser/opengenomebrowser", "html_url": "https://rseng.github.io/software/repository/github/opengenomebrowser/opengenomebrowser", "api_url": "https://rseng.github.io/software/api/repos/github/opengenomebrowser/opengenomebrowser"}, {"uid": "github/dputhier/pygtftk", "html_url": "https://rseng.github.io/software/repository/github/dputhier/pygtftk", "api_url": "https://rseng.github.io/software/api/repos/github/dputhier/pygtftk"}, {"uid": "github/FoxFortino/ABC-SN", "html_url": "https://rseng.github.io/software/repository/github/FoxFortino/ABC-SN", "api_url": "https://rseng.github.io/software/api/repos/github/FoxFortino/ABC-SN"}, {"uid": "github/ShixiangWang/sigminer", "html_url": "https://rseng.github.io/software/repository/github/ShixiangWang/sigminer", "api_url": "https://rseng.github.io/software/api/repos/github/ShixiangWang/sigminer"}, {"uid": "github/ogotoh/spaln", "html_url": "https://rseng.github.io/software/repository/github/ogotoh/spaln", "api_url": "https://rseng.github.io/software/api/repos/github/ogotoh/spaln"}, {"uid": "github/daler/gffutils", "html_url": "https://rseng.github.io/software/repository/github/daler/gffutils", "api_url": "https://rseng.github.io/software/api/repos/github/daler/gffutils"}, {"uid": "github/daler/pybedtools", "html_url": "https://rseng.github.io/software/repository/github/daler/pybedtools", "api_url": "https://rseng.github.io/software/api/repos/github/daler/pybedtools"}, {"uid": "github/EMSL-Computing/Pore2Chip", "html_url": "https://rseng.github.io/software/repository/github/EMSL-Computing/Pore2Chip", "api_url": "https://rseng.github.io/software/api/repos/github/EMSL-Computing/Pore2Chip"}, {"uid": "github/SSAGESproject/SSAGES", "html_url": "https://rseng.github.io/software/repository/github/SSAGESproject/SSAGES", "api_url": "https://rseng.github.io/software/api/repos/github/SSAGESproject/SSAGES"}, {"uid": "github/davidkipping/LDC3", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/LDC3", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/LDC3"}, {"uid": "github/davidkipping/MACULA", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MACULA", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MACULA"}, {"uid": "github/davidkipping/ECCSAMPLES", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/ECCSAMPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/ECCSAMPLES"}, {"uid": "github/davidkipping/inversebeta", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/inversebeta", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/inversebeta"}, {"uid": "github/davidkipping/flicker", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/flicker", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/flicker"}, {"uid": "github/davidkipping/MAH", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MAH", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MAH"}, {"uid": "github/rnikutta/rhocube", "html_url": "https://rseng.github.io/software/repository/github/rnikutta/rhocube", "api_url": "https://rseng.github.io/software/api/repos/github/rnikutta/rhocube"}, {"uid": "github/miRTop/mirtop", "html_url": "https://rseng.github.io/software/repository/github/miRTop/mirtop", "api_url": "https://rseng.github.io/software/api/repos/github/miRTop/mirtop"}, {"uid": "github/sambit-giri/BCemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCemu"}, {"uid": "github/sambit-giri/tools21cm", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/tools21cm", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/tools21cm"}, {"uid": "github/sambit-giri/BCMemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCMemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCMemu"}, {"uid": "github/sheryl-ai/MetaPred", "html_url": "https://rseng.github.io/software/repository/github/sheryl-ai/MetaPred", "api_url": "https://rseng.github.io/software/api/repos/github/sheryl-ai/MetaPred"}, {"uid": "github/YuRui8879/MRASleepNet", "html_url": "https://rseng.github.io/software/repository/github/YuRui8879/MRASleepNet", "api_url": "https://rseng.github.io/software/api/repos/github/YuRui8879/MRASleepNet"}, {"uid": "github/JGCRI/osiris", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/osiris", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/osiris"}, {"uid": "github/JGCRI/gaia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gaia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gaia"}, {"uid": "github/JGCRI/HELPS", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/HELPS", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/HELPS"}, {"uid": "github/JGCRI/rfasst", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rfasst", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rfasst"}, {"uid": "github/JGCRI/tethys", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/tethys", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/tethys"}, {"uid": "github/JGCRI/rmap", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rmap", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rmap"}, {"uid": "github/JGCRI/gcamfaostat", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gcamfaostat", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gcamfaostat"}, {"uid": "github/JGCRI/stitches", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/stitches", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/stitches"}, {"uid": "github/JGCRI/ambrosia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/ambrosia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/ambrosia"}, {"uid": "github/JGCRI/plutus", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/plutus", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/plutus"}, {"uid": "github/fstrozzi/Fastool", "html_url": "https://rseng.github.io/software/repository/github/fstrozzi/Fastool", "api_url": "https://rseng.github.io/software/api/repos/github/fstrozzi/Fastool"}, {"uid": "github/muttenthalerlab/PeptideMiner", "html_url": "https://rseng.github.io/software/repository/github/muttenthalerlab/PeptideMiner", "api_url": "https://rseng.github.io/software/api/repos/github/muttenthalerlab/PeptideMiner"}, {"uid": "github/chervias/DustFilaments", "html_url": "https://rseng.github.io/software/repository/github/chervias/DustFilaments", "api_url": "https://rseng.github.io/software/api/repos/github/chervias/DustFilaments"}, {"uid": "github/martinjzhang/scDRS", "html_url": "https://rseng.github.io/software/repository/github/martinjzhang/scDRS", "api_url": "https://rseng.github.io/software/api/repos/github/martinjzhang/scDRS"}, {"uid": "github/markblokpoel/mathlib", "html_url": "https://rseng.github.io/software/repository/github/markblokpoel/mathlib", "api_url": "https://rseng.github.io/software/api/repos/github/markblokpoel/mathlib"}, {"uid": "github/ianfhunter/GNOLL", "html_url": "https://rseng.github.io/software/repository/github/ianfhunter/GNOLL", "api_url": "https://rseng.github.io/software/api/repos/github/ianfhunter/GNOLL"}, {"uid": "github/ants-project/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ants-project/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ants-project/ANTs"}, {"uid": "github/SpyDust/SpyDust", "html_url": "https://rseng.github.io/software/repository/github/SpyDust/SpyDust", "api_url": "https://rseng.github.io/software/api/repos/github/SpyDust/SpyDust"}, {"uid": "github/alejostark/phase_space_cosmo_fisher", "html_url": "https://rseng.github.io/software/repository/github/alejostark/phase_space_cosmo_fisher", "api_url": "https://rseng.github.io/software/api/repos/github/alejostark/phase_space_cosmo_fisher"}, {"uid": "github/SPARC-FAIR-Codeathon/aqua", "html_url": "https://rseng.github.io/software/repository/github/SPARC-FAIR-Codeathon/aqua", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-FAIR-Codeathon/aqua"}, {"uid": "github/mkunimoto/LEO-vetter", "html_url": "https://rseng.github.io/software/repository/github/mkunimoto/LEO-vetter", "api_url": "https://rseng.github.io/software/api/repos/github/mkunimoto/LEO-vetter"}, {"uid": "github/libdynd/dynd-python", "html_url": "https://rseng.github.io/software/repository/github/libdynd/dynd-python", "api_url": "https://rseng.github.io/software/api/repos/github/libdynd/dynd-python"}, {"uid": "github/PhenoApps/Coordinate", "html_url": "https://rseng.github.io/software/repository/github/PhenoApps/Coordinate", "api_url": "https://rseng.github.io/software/api/repos/github/PhenoApps/Coordinate"}, {"uid": "github/rribeiro-sci/pygomodo", "html_url": "https://rseng.github.io/software/repository/github/rribeiro-sci/pygomodo", "api_url": "https://rseng.github.io/software/api/repos/github/rribeiro-sci/pygomodo"}, {"uid": "github/ukoethe/vigra", "html_url": "https://rseng.github.io/software/repository/github/ukoethe/vigra", "api_url": "https://rseng.github.io/software/api/repos/github/ukoethe/vigra"}, {"uid": "github/jkrogager/VoigtFit", "html_url": "https://rseng.github.io/software/repository/github/jkrogager/VoigtFit", "api_url": "https://rseng.github.io/software/api/repos/github/jkrogager/VoigtFit"}, {"uid": "github/bow/crimson", "html_url": "https://rseng.github.io/software/repository/github/bow/crimson", "api_url": "https://rseng.github.io/software/api/repos/github/bow/crimson"}, {"uid": "github/bow/fsnviz", "html_url": "https://rseng.github.io/software/repository/github/bow/fsnviz", "api_url": "https://rseng.github.io/software/api/repos/github/bow/fsnviz"}, {"uid": "github/fkeruzore/picasso", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/picasso"}, {"uid": "github/fkeruzore/panco2", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/panco2", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/panco2"}, {"uid": "github/fkeruzore/halox", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/halox", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/halox"}, {"uid": "github/tschad/pycelp", "html_url": "https://rseng.github.io/software/repository/github/tschad/pycelp", "api_url": "https://rseng.github.io/software/api/repos/github/tschad/pycelp"}, {"uid": "github/StevenGolovkine/FDApy", "html_url": "https://rseng.github.io/software/repository/github/StevenGolovkine/FDApy", "api_url": "https://rseng.github.io/software/api/repos/github/StevenGolovkine/FDApy"}, {"uid": "github/xfengnefx/hifiasm-meta", "html_url": "https://rseng.github.io/software/repository/github/xfengnefx/hifiasm-meta", "api_url": "https://rseng.github.io/software/api/repos/github/xfengnefx/hifiasm-meta"}, {"uid": "github/AtrCheema/SeqMetrics", "html_url": "https://rseng.github.io/software/repository/github/AtrCheema/SeqMetrics", "api_url": "https://rseng.github.io/software/api/repos/github/AtrCheema/SeqMetrics"}, {"uid": "github/JD2112/methylr", "html_url": "https://rseng.github.io/software/repository/github/JD2112/methylr", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/methylr"}, {"uid": "github/JD2112/TwistMethylFlow", "html_url": "https://rseng.github.io/software/repository/github/JD2112/TwistMethylFlow", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/TwistMethylFlow"}, {"uid": "github/hombit/freddi", "html_url": "https://rseng.github.io/software/repository/github/hombit/freddi", "api_url": "https://rseng.github.io/software/api/repos/github/hombit/freddi"}, {"uid": "github/abonaldi/TRECS", "html_url": "https://rseng.github.io/software/repository/github/abonaldi/TRECS", "api_url": "https://rseng.github.io/software/api/repos/github/abonaldi/TRECS"}, {"uid": "github/SchedMD/slurm", "html_url": "https://rseng.github.io/software/repository/github/SchedMD/slurm", "api_url": "https://rseng.github.io/software/api/repos/github/SchedMD/slurm"}, {"uid": "github/jendelel/PrankWebApp", "html_url": "https://rseng.github.io/software/repository/github/jendelel/PrankWebApp", "api_url": "https://rseng.github.io/software/api/repos/github/jendelel/PrankWebApp"}, {"uid": "github/ConnorStoneAstro/AutoProf", "html_url": "https://rseng.github.io/software/repository/github/ConnorStoneAstro/AutoProf", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorStoneAstro/AutoProf"}, {"uid": "github/AMSSwanglab/SpecVar", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/SpecVar", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/SpecVar"}, {"uid": "github/AMSSwanglab/RE-GOA", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/RE-GOA", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/RE-GOA"}, {"uid": "github/santeripuranen/SpydrPick", "html_url": "https://rseng.github.io/software/repository/github/santeripuranen/SpydrPick", "api_url": "https://rseng.github.io/software/api/repos/github/santeripuranen/SpydrPick"}, {"uid": "github/KBNLresearch/ochre", "html_url": "https://rseng.github.io/software/repository/github/KBNLresearch/ochre", "api_url": "https://rseng.github.io/software/api/repos/github/KBNLresearch/ochre"}, {"uid": "github/soundata/soundata", "html_url": "https://rseng.github.io/software/repository/github/soundata/soundata", "api_url": "https://rseng.github.io/software/api/repos/github/soundata/soundata"}, {"uid": "github/sdss/marvin", "html_url": "https://rseng.github.io/software/repository/github/sdss/marvin", "api_url": "https://rseng.github.io/software/api/repos/github/sdss/marvin"}, {"uid": "github/BlueBrain/BlueCelluLab", "html_url": "https://rseng.github.io/software/repository/github/BlueBrain/BlueCelluLab", "api_url": "https://rseng.github.io/software/api/repos/github/BlueBrain/BlueCelluLab"}, {"uid": "github/openmopac/MOPAC", "html_url": "https://rseng.github.io/software/repository/github/openmopac/MOPAC", "api_url": "https://rseng.github.io/software/api/repos/github/openmopac/MOPAC"}, {"uid": "github/kowallus/mbgc", "html_url": "https://rseng.github.io/software/repository/github/kowallus/mbgc", "api_url": "https://rseng.github.io/software/api/repos/github/kowallus/mbgc"}, {"uid": "github/BiocomputeLab/paraSBOLv", "html_url": "https://rseng.github.io/software/repository/github/BiocomputeLab/paraSBOLv", "api_url": "https://rseng.github.io/software/api/repos/github/BiocomputeLab/paraSBOLv"}, {"uid": "github/ArkajyotiSaha/RandomForestsGLS", "html_url": "https://rseng.github.io/software/repository/github/ArkajyotiSaha/RandomForestsGLS", "api_url": "https://rseng.github.io/software/api/repos/github/ArkajyotiSaha/RandomForestsGLS"}, {"uid": "github/pysal/spopt", "html_url": "https://rseng.github.io/software/repository/github/pysal/spopt", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spopt"}, {"uid": "github/pysal/pysal", "html_url": "https://rseng.github.io/software/repository/github/pysal/pysal", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/pysal"}, {"uid": "github/pysal/spaghetti", "html_url": "https://rseng.github.io/software/repository/github/pysal/spaghetti", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spaghetti"}, {"uid": "github/kerkelae/disimpy", "html_url": "https://rseng.github.io/software/repository/github/kerkelae/disimpy", "api_url": "https://rseng.github.io/software/api/repos/github/kerkelae/disimpy"}, {"uid": "github/vwesselkamp/ernie-extension", "html_url": "https://rseng.github.io/software/repository/github/vwesselkamp/ernie-extension", "api_url": "https://rseng.github.io/software/api/repos/github/vwesselkamp/ernie-extension"}, {"uid": "github/Exo-TiC/ExoTiC-LD", "html_url": "https://rseng.github.io/software/repository/github/Exo-TiC/ExoTiC-LD", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-TiC/ExoTiC-LD"}, {"uid": "github/cbio-astar-tools/GeneCloudOmics", "html_url": "https://rseng.github.io/software/repository/github/cbio-astar-tools/GeneCloudOmics", "api_url": "https://rseng.github.io/software/api/repos/github/cbio-astar-tools/GeneCloudOmics"}, {"uid": "github/deepsphere/deepsphere-cosmo-tf1", "html_url": "https://rseng.github.io/software/repository/github/deepsphere/deepsphere-cosmo-tf1", "api_url": "https://rseng.github.io/software/api/repos/github/deepsphere/deepsphere-cosmo-tf1"}, {"uid": "github/ifilot/edp", "html_url": "https://rseng.github.io/software/repository/github/ifilot/edp", "api_url": "https://rseng.github.io/software/api/repos/github/ifilot/edp"}, {"uid": "github/DeepRank/iScore", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/iScore", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/iScore"}, {"uid": "github/DeepRank/deeprank", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank"}, {"uid": "github/DeepRank/pssmgen", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pssmgen", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pssmgen"}, {"uid": "github/DeepRank/deeprank-core", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank-core", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank-core"}, {"uid": "github/DeepRank/DeepRank-GNN", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/DeepRank-GNN", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/DeepRank-GNN"}, {"uid": "github/DeepRank/pdb2sql", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pdb2sql", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pdb2sql"}, {"uid": "github/kennethcarrell/ATARRI", "html_url": "https://rseng.github.io/software/repository/github/kennethcarrell/ATARRI", "api_url": "https://rseng.github.io/software/api/repos/github/kennethcarrell/ATARRI"}, {"uid": "github/DarkQuestCosmology/dark_emulator_public", "html_url": "https://rseng.github.io/software/repository/github/DarkQuestCosmology/dark_emulator_public", "api_url": "https://rseng.github.io/software/api/repos/github/DarkQuestCosmology/dark_emulator_public"}, {"uid": "github/henrikdvn/CRSocket", "html_url": "https://rseng.github.io/software/repository/github/henrikdvn/CRSocket", "api_url": "https://rseng.github.io/software/api/repos/github/henrikdvn/CRSocket"}, {"uid": "github/ColmTalbot/gwpopulation", "html_url": "https://rseng.github.io/software/repository/github/ColmTalbot/gwpopulation", "api_url": "https://rseng.github.io/software/api/repos/github/ColmTalbot/gwpopulation"}, {"uid": "github/rabrahm/ceres", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/ceres", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/ceres"}, {"uid": "github/rabrahm/zaspe", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/zaspe", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/zaspe"}, {"uid": "github/dkirkby/gphist", "html_url": "https://rseng.github.io/software/repository/github/dkirkby/gphist", "api_url": "https://rseng.github.io/software/api/repos/github/dkirkby/gphist"}, {"uid": "github/Dailer/RCausticMass", "html_url": "https://rseng.github.io/software/repository/github/Dailer/RCausticMass", "api_url": "https://rseng.github.io/software/api/repos/github/Dailer/RCausticMass"}, {"uid": "github/pyro-kinetics/pyrokinetics", "html_url": "https://rseng.github.io/software/repository/github/pyro-kinetics/pyrokinetics", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-kinetics/pyrokinetics"}, {"uid": "github/nimble-dev/nimbleHMC", "html_url": "https://rseng.github.io/software/repository/github/nimble-dev/nimbleHMC", "api_url": "https://rseng.github.io/software/api/repos/github/nimble-dev/nimbleHMC"}, {"uid": "github/jobovy/streamgap-pepper", "html_url": "https://rseng.github.io/software/repository/github/jobovy/streamgap-pepper", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/streamgap-pepper"}, {"uid": "github/jobovy/stream-stream", "html_url": "https://rseng.github.io/software/repository/github/jobovy/stream-stream", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/stream-stream"}, {"uid": "github/jobovy/simple-m2m", "html_url": "https://rseng.github.io/software/repository/github/jobovy/simple-m2m", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/simple-m2m"}, {"uid": "github/jobovy/extreme-deconvolution", "html_url": "https://rseng.github.io/software/repository/github/jobovy/extreme-deconvolution", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/extreme-deconvolution"}, {"uid": "github/jobovy/galpy", "html_url": "https://rseng.github.io/software/repository/github/jobovy/galpy", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/galpy"}, {"uid": "github/jobovy/apogee", "html_url": "https://rseng.github.io/software/repository/github/jobovy/apogee", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/apogee"}, {"uid": "github/jobovy/segueSelect", "html_url": "https://rseng.github.io/software/repository/github/jobovy/segueSelect", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/segueSelect"}, {"uid": "github/jobovy/gaia_tools", "html_url": "https://rseng.github.io/software/repository/github/jobovy/gaia_tools", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/gaia_tools"}, {"uid": "github/gogetdata/ggd-utils", "html_url": "https://rseng.github.io/software/repository/github/gogetdata/ggd-utils", "api_url": "https://rseng.github.io/software/api/repos/github/gogetdata/ggd-utils"}, {"uid": "github/sanctuuary/ape", "html_url": "https://rseng.github.io/software/repository/github/sanctuuary/ape", "api_url": "https://rseng.github.io/software/api/repos/github/sanctuuary/ape"}, {"uid": "github/iosefa/PyForestScan", "html_url": "https://rseng.github.io/software/repository/github/iosefa/PyForestScan", "api_url": "https://rseng.github.io/software/api/repos/github/iosefa/PyForestScan"}, {"uid": "github/bjmorgan/py-sc-fermi", "html_url": "https://rseng.github.io/software/repository/github/bjmorgan/py-sc-fermi", "api_url": "https://rseng.github.io/software/api/repos/github/bjmorgan/py-sc-fermi"}, {"uid": "github/maormizrachi/MadVoro", "html_url": "https://rseng.github.io/software/repository/github/maormizrachi/MadVoro", "api_url": "https://rseng.github.io/software/api/repos/github/maormizrachi/MadVoro"}, {"uid": "github/galactic-ai/haloflow", "html_url": "https://rseng.github.io/software/repository/github/galactic-ai/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/galactic-ai/haloflow"}, {"uid": "github/SciOmicsLab/PhenoComb", "html_url": "https://rseng.github.io/software/repository/github/SciOmicsLab/PhenoComb", "api_url": "https://rseng.github.io/software/api/repos/github/SciOmicsLab/PhenoComb"}, {"uid": "github/cjtu/craterpy", "html_url": "https://rseng.github.io/software/repository/github/cjtu/craterpy", "api_url": "https://rseng.github.io/software/api/repos/github/cjtu/craterpy"}, {"uid": "github/egjergo/galcem", "html_url": "https://rseng.github.io/software/repository/github/egjergo/galcem", "api_url": "https://rseng.github.io/software/api/repos/github/egjergo/galcem"}, {"uid": "github/hallamlab/TreeSAPP", "html_url": "https://rseng.github.io/software/repository/github/hallamlab/TreeSAPP", "api_url": "https://rseng.github.io/software/api/repos/github/hallamlab/TreeSAPP"}, {"uid": "github/single-cell-genetics/vireo", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/vireo", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/vireo"}, {"uid": "github/single-cell-genetics/cellsnp-lite", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/cellsnp-lite", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/cellsnp-lite"}, {"uid": "github/GreiffLab/immuneREF", "html_url": "https://rseng.github.io/software/repository/github/GreiffLab/immuneREF", "api_url": "https://rseng.github.io/software/api/repos/github/GreiffLab/immuneREF"}, {"uid": "github/codemeleon/seqPanther", "html_url": "https://rseng.github.io/software/repository/github/codemeleon/seqPanther", "api_url": "https://rseng.github.io/software/api/repos/github/codemeleon/seqPanther"}, {"uid": "github/astropy/SPISEA", "html_url": "https://rseng.github.io/software/repository/github/astropy/SPISEA", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/SPISEA"}, {"uid": "github/astropy/halotools", "html_url": "https://rseng.github.io/software/repository/github/astropy/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/halotools"}, {"uid": "github/astropy/astroplan", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroplan", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroplan"}, {"uid": "github/astropy/astropy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astropy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astropy"}, {"uid": "github/astropy/astroscrappy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroscrappy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroscrappy"}, {"uid": "github/astropy/specutils", "html_url": "https://rseng.github.io/software/repository/github/astropy/specutils", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/specutils"}, {"uid": "github/astropy/ccdproc", "html_url": "https://rseng.github.io/software/repository/github/astropy/ccdproc", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/ccdproc"}, {"uid": "github/astropy/astroquery", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroquery", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroquery"}, {"uid": "github/jaimerzp/limberjack.jl", "html_url": "https://rseng.github.io/software/repository/github/jaimerzp/limberjack.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jaimerzp/limberjack.jl"}, {"uid": "github/mlarichardson/ramses2hsim", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/ramses2hsim", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/ramses2hsim"}, {"uid": "github/mlarichardson/CosmosCanvas", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/CosmosCanvas", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/CosmosCanvas"}, {"uid": "github/a-slide/pycoQC", "html_url": "https://rseng.github.io/software/repository/github/a-slide/pycoQC", "api_url": "https://rseng.github.io/software/api/repos/github/a-slide/pycoQC"}, {"uid": "github/mlhutchins/LWPC", "html_url": "https://rseng.github.io/software/repository/github/mlhutchins/LWPC", "api_url": "https://rseng.github.io/software/api/repos/github/mlhutchins/LWPC"}, {"uid": "github/SJTU-CGM/ivTerm", "html_url": "https://rseng.github.io/software/repository/github/SJTU-CGM/ivTerm", "api_url": "https://rseng.github.io/software/api/repos/github/SJTU-CGM/ivTerm"}, {"uid": "github/catboost/catboost", "html_url": "https://rseng.github.io/software/repository/github/catboost/catboost", "api_url": "https://rseng.github.io/software/api/repos/github/catboost/catboost"}, {"uid": "github/TheMillerLab/genetex", "html_url": "https://rseng.github.io/software/repository/github/TheMillerLab/genetex", "api_url": "https://rseng.github.io/software/api/repos/github/TheMillerLab/genetex"}, {"uid": "github/adtzlr/felupe", "html_url": "https://rseng.github.io/software/repository/github/adtzlr/felupe", "api_url": "https://rseng.github.io/software/api/repos/github/adtzlr/felupe"}, {"uid": "github/dstansby/pfsspy", "html_url": "https://rseng.github.io/software/repository/github/dstansby/pfsspy", "api_url": "https://rseng.github.io/software/api/repos/github/dstansby/pfsspy"}, {"uid": "github/DataIntellSystLab/KARGA", "html_url": "https://rseng.github.io/software/repository/github/DataIntellSystLab/KARGA", "api_url": "https://rseng.github.io/software/api/repos/github/DataIntellSystLab/KARGA"}, {"uid": "github/saopicc/DDFacet", "html_url": "https://rseng.github.io/software/repository/github/saopicc/DDFacet", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/DDFacet"}, {"uid": "github/saopicc/killMS", "html_url": "https://rseng.github.io/software/repository/github/saopicc/killMS", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/killMS"}, {"uid": "github/quinlanW/dbMisLoc", "html_url": "https://rseng.github.io/software/repository/github/quinlanW/dbMisLoc", "api_url": "https://rseng.github.io/software/api/repos/github/quinlanW/dbMisLoc"}, {"uid": "github/PfizerRD/sit2standpy", "html_url": "https://rseng.github.io/software/repository/github/PfizerRD/sit2standpy", "api_url": "https://rseng.github.io/software/api/repos/github/PfizerRD/sit2standpy"}, {"uid": "github/datngu/Circall", "html_url": "https://rseng.github.io/software/repository/github/datngu/Circall", "api_url": "https://rseng.github.io/software/api/repos/github/datngu/Circall"}, {"uid": "github/ropensci-review-tools/pkgcheck", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgcheck"}, {"uid": "github/ropensci-review-tools/autotest", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/autotest", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/autotest"}, {"uid": "github/ropensci-review-tools/pkgstats", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgstats", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgstats"}, {"uid": "github/ropensci-review-tools/roreviewapi", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/roreviewapi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/roreviewapi"}, {"uid": "github/ropensci-review-tools/srr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/srr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/srr"}, {"uid": "github/PrincetonUniversity/FastTemplatePeriodogram", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/FastTemplatePeriodogram"}, {"uid": "github/PrincetonUniversity/athena", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/athena", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/athena"}, {"uid": "github/PrincetonUniversity/Athena-Cversion", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/Athena-Cversion", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/Athena-Cversion"}, {"uid": "github/bcerutti/Zeltron-code", "html_url": "https://rseng.github.io/software/repository/github/bcerutti/Zeltron-code", "api_url": "https://rseng.github.io/software/api/repos/github/bcerutti/Zeltron-code"}, {"uid": "github/mrvollger/fibertools-rs", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/fibertools-rs", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/fibertools-rs"}, {"uid": "github/mrvollger/rustybam", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/rustybam", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/rustybam"}, {"uid": "github/bmorris3/aesop", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/aesop", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/aesop"}, {"uid": "github/bmorris3/fleck", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/fleck", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/fleck"}, {"uid": "github/jeremysanders/mbproj2", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/mbproj2", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/mbproj2"}, {"uid": "github/jeremysanders/dsdeproj", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/dsdeproj", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/dsdeproj"}, {"uid": "github/jeremysanders/contbin", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/contbin", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/contbin"}, {"uid": "github/jeremysanders/xspec_emcee", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/xspec_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/xspec_emcee"}, {"uid": "github/jeremysanders/spex_to_xspec", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/spex_to_xspec", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/spex_to_xspec"}, {"uid": "github/jeremysanders/ggm", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/ggm", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/ggm"}, {"uid": "github/MICCoM/SSAGES-public", "html_url": "https://rseng.github.io/software/repository/github/MICCoM/SSAGES-public", "api_url": "https://rseng.github.io/software/api/repos/github/MICCoM/SSAGES-public"}, {"uid": "github/galkintool/galkin", "html_url": "https://rseng.github.io/software/repository/github/galkintool/galkin", "api_url": "https://rseng.github.io/software/api/repos/github/galkintool/galkin"}, {"uid": "github/andycasey/smhr", "html_url": "https://rseng.github.io/software/repository/github/andycasey/smhr", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/smhr"}, {"uid": "github/andycasey/sick", "html_url": "https://rseng.github.io/software/repository/github/andycasey/sick", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/sick"}, {"uid": "github/ALive-research/Slicer-Liver", "html_url": "https://rseng.github.io/software/repository/github/ALive-research/Slicer-Liver", "api_url": "https://rseng.github.io/software/api/repos/github/ALive-research/Slicer-Liver"}, {"uid": "github/annacrnn/rebound_fragmentation", "html_url": "https://rseng.github.io/software/repository/github/annacrnn/rebound_fragmentation", "api_url": "https://rseng.github.io/software/api/repos/github/annacrnn/rebound_fragmentation"}, {"uid": "github/bareid/cosmoxi2d", "html_url": "https://rseng.github.io/software/repository/github/bareid/cosmoxi2d", "api_url": "https://rseng.github.io/software/api/repos/github/bareid/cosmoxi2d"}, {"uid": "github/kartheikiyer/dense_basis", "html_url": "https://rseng.github.io/software/repository/github/kartheikiyer/dense_basis", "api_url": "https://rseng.github.io/software/api/repos/github/kartheikiyer/dense_basis"}, {"uid": "github/ekerrison/RadioSED", "html_url": "https://rseng.github.io/software/repository/github/ekerrison/RadioSED", "api_url": "https://rseng.github.io/software/api/repos/github/ekerrison/RadioSED"}, {"uid": "github/PopovIILab/KrakenParser", "html_url": "https://rseng.github.io/software/repository/github/PopovIILab/KrakenParser", "api_url": "https://rseng.github.io/software/api/repos/github/PopovIILab/KrakenParser"}, {"uid": "github/weecology/retriever", "html_url": "https://rseng.github.io/software/repository/github/weecology/retriever", "api_url": "https://rseng.github.io/software/api/repos/github/weecology/retriever"}, {"uid": "github/lpfworld/DMPNet", "html_url": "https://rseng.github.io/software/repository/github/lpfworld/DMPNet", "api_url": "https://rseng.github.io/software/api/repos/github/lpfworld/DMPNet"}, {"uid": "github/YaleTHz/nelly", "html_url": "https://rseng.github.io/software/repository/github/YaleTHz/nelly", "api_url": "https://rseng.github.io/software/api/repos/github/YaleTHz/nelly"}, {"uid": "github/gijut/gnucash", "html_url": "https://rseng.github.io/software/repository/github/gijut/gnucash", "api_url": "https://rseng.github.io/software/api/repos/github/gijut/gnucash"}, {"uid": "github/pkgw/pwkit", "html_url": "https://rseng.github.io/software/repository/github/pkgw/pwkit", "api_url": "https://rseng.github.io/software/api/repos/github/pkgw/pwkit"}, {"uid": "github/Planet-AI-GmbH/tfaip", "html_url": "https://rseng.github.io/software/repository/github/Planet-AI-GmbH/tfaip", "api_url": "https://rseng.github.io/software/api/repos/github/Planet-AI-GmbH/tfaip"}, {"uid": "github/gkulkarni/QLF", "html_url": "https://rseng.github.io/software/repository/github/gkulkarni/QLF", "api_url": "https://rseng.github.io/software/api/repos/github/gkulkarni/QLF"}, {"uid": "github/sodascience/metasyn", "html_url": "https://rseng.github.io/software/repository/github/sodascience/metasyn", "api_url": "https://rseng.github.io/software/api/repos/github/sodascience/metasyn"}, {"uid": "github/mjuric/galfast", "html_url": "https://rseng.github.io/software/repository/github/mjuric/galfast", "api_url": "https://rseng.github.io/software/api/repos/github/mjuric/galfast"}, {"uid": "github/ideasrule/pyTPCI", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/pyTPCI", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/pyTPCI"}, {"uid": "github/ideasrule/platon", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/platon", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/platon"}, {"uid": "github/OttoStruve/muler", "html_url": "https://rseng.github.io/software/repository/github/OttoStruve/muler", "api_url": "https://rseng.github.io/software/api/repos/github/OttoStruve/muler"}, {"uid": "github/farhanferoz/SkyNet", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/SkyNet", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/SkyNet"}, {"uid": "github/farhanferoz/MultiNest", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/MultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/MultiNest"}, {"uid": "github/farhanferoz/BAMBI", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/BAMBI", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/BAMBI"}, {"uid": "github/Natsiopoulos/ARDL", "html_url": "https://rseng.github.io/software/repository/github/Natsiopoulos/ARDL", "api_url": "https://rseng.github.io/software/api/repos/github/Natsiopoulos/ARDL"}, {"uid": "github/r-spatialecology/shar", "html_url": "https://rseng.github.io/software/repository/github/r-spatialecology/shar", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatialecology/shar"}, {"uid": "github/jiffyclub/palettable", "html_url": "https://rseng.github.io/software/repository/github/jiffyclub/palettable", "api_url": "https://rseng.github.io/software/api/repos/github/jiffyclub/palettable"}, {"uid": "github/bioinfo-ut/GenomeTester4", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/GenomeTester4", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/GenomeTester4"}, {"uid": "github/bioinfo-ut/PlasmidSeeker", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/PlasmidSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/PlasmidSeeker"}, {"uid": "github/timothyas/xesn", "html_url": "https://rseng.github.io/software/repository/github/timothyas/xesn", "api_url": "https://rseng.github.io/software/api/repos/github/timothyas/xesn"}, {"uid": "github/artic-network/readucks", "html_url": "https://rseng.github.io/software/repository/github/artic-network/readucks", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/readucks"}, {"uid": "github/artic-network/fieldbioinformatics", "html_url": "https://rseng.github.io/software/repository/github/artic-network/fieldbioinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/fieldbioinformatics"}, {"uid": "github/klb2/qmkpy", "html_url": "https://rseng.github.io/software/repository/github/klb2/qmkpy", "api_url": "https://rseng.github.io/software/api/repos/github/klb2/qmkpy"}, {"uid": "github/p-sira/ellip", "html_url": "https://rseng.github.io/software/repository/github/p-sira/ellip", "api_url": "https://rseng.github.io/software/api/repos/github/p-sira/ellip"}, {"uid": "github/fripon/freeture", "html_url": "https://rseng.github.io/software/repository/github/fripon/freeture", "api_url": "https://rseng.github.io/software/api/repos/github/fripon/freeture"}, {"uid": "github/jrkerns/pylinac", "html_url": "https://rseng.github.io/software/repository/github/jrkerns/pylinac", "api_url": "https://rseng.github.io/software/api/repos/github/jrkerns/pylinac"}, {"uid": "github/jorgensd/adios4dolfinx", "html_url": "https://rseng.github.io/software/repository/github/jorgensd/adios4dolfinx", "api_url": "https://rseng.github.io/software/api/repos/github/jorgensd/adios4dolfinx"}, {"uid": "github/vocalpy/crowsetta", "html_url": "https://rseng.github.io/software/repository/github/vocalpy/crowsetta", "api_url": "https://rseng.github.io/software/api/repos/github/vocalpy/crowsetta"}, {"uid": "github/MNGuenther/allesfitter", "html_url": "https://rseng.github.io/software/repository/github/MNGuenther/allesfitter", "api_url": "https://rseng.github.io/software/api/repos/github/MNGuenther/allesfitter"}, {"uid": "github/signalling-games-org/evoke", "html_url": "https://rseng.github.io/software/repository/github/signalling-games-org/evoke", "api_url": "https://rseng.github.io/software/api/repos/github/signalling-games-org/evoke"}, {"uid": "github/mzemp/halogen", "html_url": "https://rseng.github.io/software/repository/github/mzemp/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/mzemp/halogen"}, {"uid": "github/ANTsX/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ANTsX/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ANTsX/ANTs"}, {"uid": "github/eucp-project/storyboards", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/storyboards", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/storyboards"}, {"uid": "github/eucp-project/atlas", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/atlas", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/atlas"}, {"uid": "github/rferdman/afr", "html_url": "https://rseng.github.io/software/repository/github/rferdman/afr", "api_url": "https://rseng.github.io/software/api/repos/github/rferdman/afr"}, {"uid": "github/drgmk/vis-r", "html_url": "https://rseng.github.io/software/repository/github/drgmk/vis-r", "api_url": "https://rseng.github.io/software/api/repos/github/drgmk/vis-r"}, {"uid": "github/DKMS/hapl-o-Mat_WinBin", "html_url": "https://rseng.github.io/software/repository/github/DKMS/hapl-o-Mat_WinBin", "api_url": "https://rseng.github.io/software/api/repos/github/DKMS/hapl-o-Mat_WinBin"}, {"uid": "github/tofflemire/saphires", "html_url": "https://rseng.github.io/software/repository/github/tofflemire/saphires", "api_url": "https://rseng.github.io/software/api/repos/github/tofflemire/saphires"}, {"uid": "github/alekseyzimin/ufasta", "html_url": "https://rseng.github.io/software/repository/github/alekseyzimin/ufasta", "api_url": "https://rseng.github.io/software/api/repos/github/alekseyzimin/ufasta"}, {"uid": "github/dask/dask", "html_url": "https://rseng.github.io/software/repository/github/dask/dask", "api_url": "https://rseng.github.io/software/api/repos/github/dask/dask"}, {"uid": "github/kkma89/dmcalc", "html_url": "https://rseng.github.io/software/repository/github/kkma89/dmcalc", "api_url": "https://rseng.github.io/software/api/repos/github/kkma89/dmcalc"}, {"uid": "github/LangeLab/SQuAPP", "html_url": "https://rseng.github.io/software/repository/github/LangeLab/SQuAPP", "api_url": "https://rseng.github.io/software/api/repos/github/LangeLab/SQuAPP"}, {"uid": "github/seisman/HinetPy", "html_url": "https://rseng.github.io/software/repository/github/seisman/HinetPy", "api_url": "https://rseng.github.io/software/api/repos/github/seisman/HinetPy"}, {"uid": "github/BasilioRuiz/SIR-code", "html_url": "https://rseng.github.io/software/repository/github/BasilioRuiz/SIR-code", "api_url": "https://rseng.github.io/software/api/repos/github/BasilioRuiz/SIR-code"}, {"uid": "github/FarnazFouladi/HashSeq_Manuscript", "html_url": "https://rseng.github.io/software/repository/github/FarnazFouladi/HashSeq_Manuscript", "api_url": "https://rseng.github.io/software/api/repos/github/FarnazFouladi/HashSeq_Manuscript"}, {"uid": "github/wcxve/elisa", "html_url": "https://rseng.github.io/software/repository/github/wcxve/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/wcxve/elisa"}, {"uid": "github/biocore/emperor", "html_url": "https://rseng.github.io/software/repository/github/biocore/emperor", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/emperor"}, {"uid": "github/biocore/unifrac", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac"}, {"uid": "github/biocore/unifrac-binaries", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac-binaries", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac-binaries"}, {"uid": "github/biocore/sortmerna", "html_url": "https://rseng.github.io/software/repository/github/biocore/sortmerna", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/sortmerna"}, {"uid": "github/biocore/scikit-bio", "html_url": "https://rseng.github.io/software/repository/github/biocore/scikit-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/scikit-bio"}, {"uid": "github/biocore/deblur", "html_url": "https://rseng.github.io/software/repository/github/biocore/deblur", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/deblur"}, {"uid": "github/thraraujo/pysymmpol", "html_url": "https://rseng.github.io/software/repository/github/thraraujo/pysymmpol", "api_url": "https://rseng.github.io/software/api/repos/github/thraraujo/pysymmpol"}, {"uid": "github/mtlam/PyPulse", "html_url": "https://rseng.github.io/software/repository/github/mtlam/PyPulse", "api_url": "https://rseng.github.io/software/api/repos/github/mtlam/PyPulse"}, {"uid": "github/JuliaQuantumControl/GRAPE.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQuantumControl/GRAPE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQuantumControl/GRAPE.jl"}, {"uid": "github/GreenBankObservatory/gbtgridder", "html_url": "https://rseng.github.io/software/repository/github/GreenBankObservatory/gbtgridder", "api_url": "https://rseng.github.io/software/api/repos/github/GreenBankObservatory/gbtgridder"}, {"uid": "github/IKNL/vantage6", "html_url": "https://rseng.github.io/software/repository/github/IKNL/vantage6", "api_url": "https://rseng.github.io/software/api/repos/github/IKNL/vantage6"}, {"uid": "github/tjlcbakx/redshift-search-graphs", "html_url": "https://rseng.github.io/software/repository/github/tjlcbakx/redshift-search-graphs", "api_url": "https://rseng.github.io/software/api/repos/github/tjlcbakx/redshift-search-graphs"}, {"uid": "github/berczik/phi-GPU-mole", "html_url": "https://rseng.github.io/software/repository/github/berczik/phi-GPU-mole", "api_url": "https://rseng.github.io/software/api/repos/github/berczik/phi-GPU-mole"}, {"uid": "github/neuromodulation/py_neuromodulation", "html_url": "https://rseng.github.io/software/repository/github/neuromodulation/py_neuromodulation", "api_url": "https://rseng.github.io/software/api/repos/github/neuromodulation/py_neuromodulation"}, {"uid": "github/bioinform/somaticseq", "html_url": "https://rseng.github.io/software/repository/github/bioinform/somaticseq", "api_url": "https://rseng.github.io/software/api/repos/github/bioinform/somaticseq"}, {"uid": "github/usnistgov/imppy3d", "html_url": "https://rseng.github.io/software/repository/github/usnistgov/imppy3d", "api_url": "https://rseng.github.io/software/api/repos/github/usnistgov/imppy3d"}, {"uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy"}, {"uid": "github/SzokeMark-Andor/AstroDataProcessing", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/AstroDataProcessing", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/AstroDataProcessing"}, {"uid": "github/bcalden/ClusterPyXT", "html_url": "https://rseng.github.io/software/repository/github/bcalden/ClusterPyXT", "api_url": "https://rseng.github.io/software/api/repos/github/bcalden/ClusterPyXT"}, {"uid": "github/annagraff/densify", "html_url": "https://rseng.github.io/software/repository/github/annagraff/densify", "api_url": "https://rseng.github.io/software/api/repos/github/annagraff/densify"}, {"uid": "github/songlabcodes/MSC", "html_url": "https://rseng.github.io/software/repository/github/songlabcodes/MSC", "api_url": "https://rseng.github.io/software/api/repos/github/songlabcodes/MSC"}, {"uid": "github/stefanofisc/dartvetter_apj", "html_url": "https://rseng.github.io/software/repository/github/stefanofisc/dartvetter_apj", "api_url": "https://rseng.github.io/software/api/repos/github/stefanofisc/dartvetter_apj"}, {"uid": "github/prajwel/curvit", "html_url": "https://rseng.github.io/software/repository/github/prajwel/curvit", "api_url": "https://rseng.github.io/software/api/repos/github/prajwel/curvit"}, {"uid": "github/bokunoBike/m6AGE", "html_url": "https://rseng.github.io/software/repository/github/bokunoBike/m6AGE", "api_url": "https://rseng.github.io/software/api/repos/github/bokunoBike/m6AGE"}, {"uid": "github/biod/sambamba", "html_url": "https://rseng.github.io/software/repository/github/biod/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/biod/sambamba"}, {"uid": "github/oruhnau/when2heat", "html_url": "https://rseng.github.io/software/repository/github/oruhnau/when2heat", "api_url": "https://rseng.github.io/software/api/repos/github/oruhnau/when2heat"}, {"uid": "github/fredericlemoine/goalign", "html_url": "https://rseng.github.io/software/repository/github/fredericlemoine/goalign", "api_url": "https://rseng.github.io/software/api/repos/github/fredericlemoine/goalign"}, {"uid": "github/bandframework/Taweret", "html_url": "https://rseng.github.io/software/repository/github/bandframework/Taweret", "api_url": "https://rseng.github.io/software/api/repos/github/bandframework/Taweret"}, {"uid": "github/PCMSolver/pcmsolver", "html_url": "https://rseng.github.io/software/repository/github/PCMSolver/pcmsolver", "api_url": "https://rseng.github.io/software/api/repos/github/PCMSolver/pcmsolver"}, {"uid": "github/florent-leclercq/pyselfi", "html_url": "https://rseng.github.io/software/repository/github/florent-leclercq/pyselfi", "api_url": "https://rseng.github.io/software/api/repos/github/florent-leclercq/pyselfi"}, {"uid": "github/astro-seanwhy/ExoInt", "html_url": "https://rseng.github.io/software/repository/github/astro-seanwhy/ExoInt", "api_url": "https://rseng.github.io/software/api/repos/github/astro-seanwhy/ExoInt"}, {"uid": "github/EmmanuelSchaan/LensQuEst", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LensQuEst", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LensQuEst"}, {"uid": "github/EmmanuelSchaan/ThumbStack", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/ThumbStack", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/ThumbStack"}, {"uid": "github/EmmanuelSchaan/HaloGen", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/HaloGen", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/HaloGen"}, {"uid": "github/EmmanuelSchaan/LaSSI", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LaSSI", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LaSSI"}, {"uid": "github/CoastEgo/microlux", "html_url": "https://rseng.github.io/software/repository/github/CoastEgo/microlux", "api_url": "https://rseng.github.io/software/api/repos/github/CoastEgo/microlux"}, {"uid": "github/NLESC-JCER/QMCblip", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCblip", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCblip"}, {"uid": "github/NLESC-JCER/QMCTorch", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCTorch", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCTorch"}, {"uid": "github/NLESC-JCER/EigenCuda", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/EigenCuda", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/EigenCuda"}, {"uid": "github/NLESC-JCER/Fortran_Davidson", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/Fortran_Davidson", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/Fortran_Davidson"}, {"uid": "github/vijayvarma392/binaryBHexp", "html_url": "https://rseng.github.io/software/repository/github/vijayvarma392/binaryBHexp", "api_url": "https://rseng.github.io/software/api/repos/github/vijayvarma392/binaryBHexp"}, {"uid": "github/AsterLight0626/Twinkle", "html_url": "https://rseng.github.io/software/repository/github/AsterLight0626/Twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/AsterLight0626/Twinkle"}, {"uid": "github/IBMTRostock/GIFT", "html_url": "https://rseng.github.io/software/repository/github/IBMTRostock/GIFT", "api_url": "https://rseng.github.io/software/api/repos/github/IBMTRostock/GIFT"}, {"uid": "github/GEUS-Glaciology-and-Climate/GrIML", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/GrIML"}, {"uid": "github/GEUS-Glaciology-and-Climate/pypromice", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/pypromice"}, {"uid": "github/RETURN-project/BenchmarkRecovery", "html_url": "https://rseng.github.io/software/repository/github/RETURN-project/BenchmarkRecovery", "api_url": "https://rseng.github.io/software/api/repos/github/RETURN-project/BenchmarkRecovery"}, {"uid": "github/Ensembl/WiggleTools", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/WiggleTools", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/WiggleTools"}, {"uid": "github/Ensembl/ensembl-vep", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/ensembl-vep", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/ensembl-vep"}, {"uid": "github/tylertrimble/viswaternet", "html_url": "https://rseng.github.io/software/repository/github/tylertrimble/viswaternet", "api_url": "https://rseng.github.io/software/api/repos/github/tylertrimble/viswaternet"}, {"uid": "github/tomalf2/recombinhunt-cov", "html_url": "https://rseng.github.io/software/repository/github/tomalf2/recombinhunt-cov", "api_url": "https://rseng.github.io/software/api/repos/github/tomalf2/recombinhunt-cov"}, {"uid": "github/floodlight-sports/floodlight", "html_url": "https://rseng.github.io/software/repository/github/floodlight-sports/floodlight", "api_url": "https://rseng.github.io/software/api/repos/github/floodlight-sports/floodlight"}, {"uid": "github/izsvenezie-virology/genin2", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/genin2", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/genin2"}, {"uid": "github/izsvenezie-virology/FluMut", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/FluMut", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/FluMut"}, {"uid": "github/umbralcalc/nfield", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/nfield", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/nfield"}, {"uid": "github/umbralcalc/foxi", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/foxi", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/foxi"}, {"uid": "github/umbralcalc/helmpy", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/helmpy", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/helmpy"}, {"uid": "github/svi-opensource/libics", "html_url": "https://rseng.github.io/software/repository/github/svi-opensource/libics", "api_url": "https://rseng.github.io/software/api/repos/github/svi-opensource/libics"}, {"uid": "github/quantling/pyndl", "html_url": "https://rseng.github.io/software/repository/github/quantling/pyndl", "api_url": "https://rseng.github.io/software/api/repos/github/quantling/pyndl"}, {"uid": "github/dipto4/falcon_dm", "html_url": "https://rseng.github.io/software/repository/github/dipto4/falcon_dm", "api_url": "https://rseng.github.io/software/api/repos/github/dipto4/falcon_dm"}, {"uid": "github/arnauqb/Qwind.jl", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/Qwind.jl", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/Qwind.jl"}, {"uid": "github/arnauqb/qwind", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/qwind", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/qwind"}, {"uid": "github/davidsoergel/rtax", "html_url": "https://rseng.github.io/software/repository/github/davidsoergel/rtax", "api_url": "https://rseng.github.io/software/api/repos/github/davidsoergel/rtax"}, {"uid": "github/lu-yizhou/ClusterSeg", "html_url": "https://rseng.github.io/software/repository/github/lu-yizhou/ClusterSeg", "api_url": "https://rseng.github.io/software/api/repos/github/lu-yizhou/ClusterSeg"}, {"uid": "github/wetransform-os/ProMCDA", "html_url": "https://rseng.github.io/software/repository/github/wetransform-os/ProMCDA", "api_url": "https://rseng.github.io/software/api/repos/github/wetransform-os/ProMCDA"}, {"uid": "github/BapMel/mesocalc", "html_url": "https://rseng.github.io/software/repository/github/BapMel/mesocalc", "api_url": "https://rseng.github.io/software/api/repos/github/BapMel/mesocalc"}, {"uid": "github/Jieyu126/Jitter", "html_url": "https://rseng.github.io/software/repository/github/Jieyu126/Jitter", "api_url": "https://rseng.github.io/software/api/repos/github/Jieyu126/Jitter"}, {"uid": "github/idem-lab/conmat", "html_url": "https://rseng.github.io/software/repository/github/idem-lab/conmat", "api_url": "https://rseng.github.io/software/api/repos/github/idem-lab/conmat"}, {"uid": "github/joannegger/plaNETic", "html_url": "https://rseng.github.io/software/repository/github/joannegger/plaNETic", "api_url": "https://rseng.github.io/software/api/repos/github/joannegger/plaNETic"}, {"uid": "github/lifs-tools/goslin", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/goslin", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/goslin"}, {"uid": "github/lifs-tools/jmzTab-m", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/jmzTab-m", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/jmzTab-m"}, {"uid": "github/ClusterMonteCarlo/CMC-COSMIC", "html_url": "https://rseng.github.io/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ClusterMonteCarlo/CMC-COSMIC"}, {"uid": "github/DrexelLenser/Lenser", "html_url": "https://rseng.github.io/software/repository/github/DrexelLenser/Lenser", "api_url": "https://rseng.github.io/software/api/repos/github/DrexelLenser/Lenser"}, {"uid": "github/ejikeugba/serp", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/serp", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/serp"}, {"uid": "github/ejikeugba/gofcat", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/gofcat", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/gofcat"}, {"uid": "github/project-lighter/lighter", "html_url": "https://rseng.github.io/software/repository/github/project-lighter/lighter", "api_url": "https://rseng.github.io/software/api/repos/github/project-lighter/lighter"}, {"uid": "github/unfoldtoolbox/UnfoldSim.jl", "html_url": "https://rseng.github.io/software/repository/github/unfoldtoolbox/UnfoldSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/unfoldtoolbox/UnfoldSim.jl"}, {"uid": "github/takfung/ResDisMapper", "html_url": "https://rseng.github.io/software/repository/github/takfung/ResDisMapper", "api_url": "https://rseng.github.io/software/api/repos/github/takfung/ResDisMapper"}, {"uid": "github/Tomcxf/FASTdRNA", "html_url": "https://rseng.github.io/software/repository/github/Tomcxf/FASTdRNA", "api_url": "https://rseng.github.io/software/api/repos/github/Tomcxf/FASTdRNA"}, {"uid": "github/dondi/GRNsight", "html_url": "https://rseng.github.io/software/repository/github/dondi/GRNsight", "api_url": "https://rseng.github.io/software/api/repos/github/dondi/GRNsight"}, {"uid": "github/deepmodeling/DMFF", "html_url": "https://rseng.github.io/software/repository/github/deepmodeling/DMFF", "api_url": "https://rseng.github.io/software/api/repos/github/deepmodeling/DMFF"}, {"uid": "github/HLasse/TextDescriptives", "html_url": "https://rseng.github.io/software/repository/github/HLasse/TextDescriptives", "api_url": "https://rseng.github.io/software/api/repos/github/HLasse/TextDescriptives"}, {"uid": "github/gourabghoshroy/MPVNN", "html_url": "https://rseng.github.io/software/repository/github/gourabghoshroy/MPVNN", "api_url": "https://rseng.github.io/software/api/repos/github/gourabghoshroy/MPVNN"}, {"uid": "github/rossjturner/RAiSERed", "html_url": "https://rseng.github.io/software/repository/github/rossjturner/RAiSERed", "api_url": "https://rseng.github.io/software/api/repos/github/rossjturner/RAiSERed"}, {"uid": "github/yanrong-stacy-song/creditr", "html_url": "https://rseng.github.io/software/repository/github/yanrong-stacy-song/creditr", "api_url": "https://rseng.github.io/software/api/repos/github/yanrong-stacy-song/creditr"}, {"uid": "github/EMBL-Hentze-group/htseq-clip", "html_url": "https://rseng.github.io/software/repository/github/EMBL-Hentze-group/htseq-clip", "api_url": "https://rseng.github.io/software/api/repos/github/EMBL-Hentze-group/htseq-clip"}, {"uid": "github/yangyanli/DO-Conv", "html_url": "https://rseng.github.io/software/repository/github/yangyanli/DO-Conv", "api_url": "https://rseng.github.io/software/api/repos/github/yangyanli/DO-Conv"}, {"uid": "github/Substra/substra", "html_url": "https://rseng.github.io/software/repository/github/Substra/substra", "api_url": "https://rseng.github.io/software/api/repos/github/Substra/substra"}, {"uid": "github/rikenbit/iTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/iTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/iTensor"}, {"uid": "github/rikenbit/OnlineNMF.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlineNMF.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlineNMF.jl"}, {"uid": "github/rikenbit/nnTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/nnTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/nnTensor"}, {"uid": "github/rikenbit/OnlinePCA.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlinePCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlinePCA.jl"}, {"uid": "github/rikenbit/dcTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/dcTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/dcTensor"}, {"uid": "github/shinichiroando/sashimi-w", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-w", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-w"}, {"uid": "github/shinichiroando/sashimi-c", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-c", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-c"}, {"uid": "github/spglib/spgrep", "html_url": "https://rseng.github.io/software/repository/github/spglib/spgrep", "api_url": "https://rseng.github.io/software/api/repos/github/spglib/spgrep"}, {"uid": "github/EddyRivasLab/hmmer", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/hmmer", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/hmmer"}, {"uid": "github/EddyRivasLab/infernal", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/infernal", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/infernal"}, {"uid": "github/fxwiegand/predictosaurus", "html_url": "https://rseng.github.io/software/repository/github/fxwiegand/predictosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/fxwiegand/predictosaurus"}, {"uid": "github/grant-m-s/astronomicAL", "html_url": "https://rseng.github.io/software/repository/github/grant-m-s/astronomicAL", "api_url": "https://rseng.github.io/software/api/repos/github/grant-m-s/astronomicAL"}, {"uid": "github/hpc4cmb/toast", "html_url": "https://rseng.github.io/software/repository/github/hpc4cmb/toast", "api_url": "https://rseng.github.io/software/api/repos/github/hpc4cmb/toast"}, {"uid": "github/research-software-directory/research-software-directory", "html_url": "https://rseng.github.io/software/repository/github/research-software-directory/research-software-directory", "api_url": "https://rseng.github.io/software/api/repos/github/research-software-directory/research-software-directory"}, {"uid": "github/sachsmc/cosinor", "html_url": "https://rseng.github.io/software/repository/github/sachsmc/cosinor", "api_url": "https://rseng.github.io/software/api/repos/github/sachsmc/cosinor"}, {"uid": "github/SeaIce-Math/SubZero", "html_url": "https://rseng.github.io/software/repository/github/SeaIce-Math/SubZero", "api_url": "https://rseng.github.io/software/api/repos/github/SeaIce-Math/SubZero"}, {"uid": "github/CosmoLike/CosmoCov", "html_url": "https://rseng.github.io/software/repository/github/CosmoLike/CosmoCov", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoLike/CosmoCov"}, {"uid": "github/Dfupa/meTAline", "html_url": "https://rseng.github.io/software/repository/github/Dfupa/meTAline", "api_url": "https://rseng.github.io/software/api/repos/github/Dfupa/meTAline"}, {"uid": "github/jenniferlu717/Bracken", "html_url": "https://rseng.github.io/software/repository/github/jenniferlu717/Bracken", "api_url": "https://rseng.github.io/software/api/repos/github/jenniferlu717/Bracken"}, {"uid": "github/SkywalkerLuke/TransHLA", "html_url": "https://rseng.github.io/software/repository/github/SkywalkerLuke/TransHLA", "api_url": "https://rseng.github.io/software/api/repos/github/SkywalkerLuke/TransHLA"}, {"uid": "github/younglab/origami", "html_url": "https://rseng.github.io/software/repository/github/younglab/origami", "api_url": "https://rseng.github.io/software/api/repos/github/younglab/origami"}, {"uid": "github/cbml-forth/eucaim_wizard_tool", "html_url": "https://rseng.github.io/software/repository/github/cbml-forth/eucaim_wizard_tool", "api_url": "https://rseng.github.io/software/api/repos/github/cbml-forth/eucaim_wizard_tool"}, {"uid": "github/shenlab-sinai/ngsplot", "html_url": "https://rseng.github.io/software/repository/github/shenlab-sinai/ngsplot", "api_url": "https://rseng.github.io/software/api/repos/github/shenlab-sinai/ngsplot"}, {"uid": "github/ngbusca/QuasarNET", "html_url": "https://rseng.github.io/software/repository/github/ngbusca/QuasarNET", "api_url": "https://rseng.github.io/software/api/repos/github/ngbusca/QuasarNET"}, {"uid": "github/MetaCell/scicrunch-antibody-registry", "html_url": "https://rseng.github.io/software/repository/github/MetaCell/scicrunch-antibody-registry", "api_url": "https://rseng.github.io/software/api/repos/github/MetaCell/scicrunch-antibody-registry"}, {"uid": "github/ratschlab/metagraph", "html_url": "https://rseng.github.io/software/repository/github/ratschlab/metagraph", "api_url": "https://rseng.github.io/software/api/repos/github/ratschlab/metagraph"}, {"uid": "github/xiaochuanle/MECAT2", "html_url": "https://rseng.github.io/software/repository/github/xiaochuanle/MECAT2", "api_url": "https://rseng.github.io/software/api/repos/github/xiaochuanle/MECAT2"}, {"uid": "github/Music-and-Culture-Technology-Lab/omnizart", "html_url": "https://rseng.github.io/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", "api_url": "https://rseng.github.io/software/api/repos/github/Music-and-Culture-Technology-Lab/omnizart"}, {"uid": "github/brettc/partitionfinder", "html_url": "https://rseng.github.io/software/repository/github/brettc/partitionfinder", "api_url": "https://rseng.github.io/software/api/repos/github/brettc/partitionfinder"}, {"uid": "github/inrae/RCaNmodel", "html_url": "https://rseng.github.io/software/repository/github/inrae/RCaNmodel", "api_url": "https://rseng.github.io/software/api/repos/github/inrae/RCaNmodel"}, {"uid": "github/LTLA/basilisk", "html_url": "https://rseng.github.io/software/repository/github/LTLA/basilisk", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/basilisk"}, {"uid": "github/LTLA/gesel.js", "html_url": "https://rseng.github.io/software/repository/github/LTLA/gesel.js", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/gesel.js"}, {"uid": "github/soichiro-hattori/unpopular", "html_url": "https://rseng.github.io/software/repository/github/soichiro-hattori/unpopular", "api_url": "https://rseng.github.io/software/api/repos/github/soichiro-hattori/unpopular"}, {"uid": "github/uw-ipd/RoseTTAFold2", "html_url": "https://rseng.github.io/software/repository/github/uw-ipd/RoseTTAFold2", "api_url": "https://rseng.github.io/software/api/repos/github/uw-ipd/RoseTTAFold2"}, {"uid": "github/ropensci-archive/monkeylearn", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/monkeylearn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/monkeylearn"}, {"uid": "github/ropensci-archive/arresteddev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/arresteddev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/arresteddev"}, {"uid": "github/ropensci-archive/rodev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/rodev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/rodev"}, {"uid": "github/ropensci-archive/reviewer", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/reviewer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/reviewer"}, {"uid": "github/pyvisa/pyvisa", "html_url": "https://rseng.github.io/software/repository/github/pyvisa/pyvisa", "api_url": "https://rseng.github.io/software/api/repos/github/pyvisa/pyvisa"}, {"uid": "github/tudelft3d/3dfier", "html_url": "https://rseng.github.io/software/repository/github/tudelft3d/3dfier", "api_url": "https://rseng.github.io/software/api/repos/github/tudelft3d/3dfier"}, {"uid": "github/phelelani/nf-rnaSeqMetagen", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqMetagen", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqMetagen"}, {"uid": "github/phelelani/nf-rnaSeqCount", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqCount", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqCount"}, {"uid": "github/tikk3r/lofar-h5plot", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/lofar-h5plot", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/lofar-h5plot"}, {"uid": "github/tikk3r/legacystamps", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/legacystamps", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/legacystamps"}, {"uid": "github/snystrom/memes", "html_url": "https://rseng.github.io/software/repository/github/snystrom/memes", "api_url": "https://rseng.github.io/software/api/repos/github/snystrom/memes"}, {"uid": "github/SALT-NIRWALS/nirwals", "html_url": "https://rseng.github.io/software/repository/github/SALT-NIRWALS/nirwals", "api_url": "https://rseng.github.io/software/api/repos/github/SALT-NIRWALS/nirwals"}, {"uid": "github/metabolomicsworkbench/MetGENE", "html_url": "https://rseng.github.io/software/repository/github/metabolomicsworkbench/MetGENE", "api_url": "https://rseng.github.io/software/api/repos/github/metabolomicsworkbench/MetGENE"}, {"uid": "github/gorpipe/gor", "html_url": "https://rseng.github.io/software/repository/github/gorpipe/gor", "api_url": "https://rseng.github.io/software/api/repos/github/gorpipe/gor"}, {"uid": "github/max0x7ba/atomic_queue", "html_url": "https://rseng.github.io/software/repository/github/max0x7ba/atomic_queue", "api_url": "https://rseng.github.io/software/api/repos/github/max0x7ba/atomic_queue"}, {"uid": "github/silburt/DeepMoon", "html_url": "https://rseng.github.io/software/repository/github/silburt/DeepMoon", "api_url": "https://rseng.github.io/software/api/repos/github/silburt/DeepMoon"}, {"uid": "github/aineniamh/squirrel", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/squirrel", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/squirrel"}, {"uid": "github/aineniamh/snipit", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/snipit", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/snipit"}, {"uid": "github/xraypy/xraylarch", "html_url": "https://rseng.github.io/software/repository/github/xraypy/xraylarch", "api_url": "https://rseng.github.io/software/api/repos/github/xraypy/xraylarch"}, {"uid": "github/dgarrimar/sqtlseeker2-nf", "html_url": "https://rseng.github.io/software/repository/github/dgarrimar/sqtlseeker2-nf", "api_url": "https://rseng.github.io/software/api/repos/github/dgarrimar/sqtlseeker2-nf"}, {"uid": "github/t00shadow/CryoDataBot", "html_url": "https://rseng.github.io/software/repository/github/t00shadow/CryoDataBot", "api_url": "https://rseng.github.io/software/api/repos/github/t00shadow/CryoDataBot"}, {"uid": "github/RosettaCommons/RoseTTAFold", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RoseTTAFold", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RoseTTAFold"}, {"uid": "github/RosettaCommons/RFDesign", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RFDesign", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RFDesign"}, {"uid": "github/CaymanUnterborn/ExoPlex", "html_url": "https://rseng.github.io/software/repository/github/CaymanUnterborn/ExoPlex", "api_url": "https://rseng.github.io/software/api/repos/github/CaymanUnterborn/ExoPlex"}, {"uid": "github/gear-genomics/dicey", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/dicey", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/dicey"}, {"uid": "github/gear-genomics/tracy", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/tracy", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/tracy"}, {"uid": "github/heuermh/dishevelled-bio", "html_url": "https://rseng.github.io/software/repository/github/heuermh/dishevelled-bio", "api_url": "https://rseng.github.io/software/api/repos/github/heuermh/dishevelled-bio"}, {"uid": "github/rcsb/mmtf-python", "html_url": "https://rseng.github.io/software/repository/github/rcsb/mmtf-python", "api_url": "https://rseng.github.io/software/api/repos/github/rcsb/mmtf-python"}, {"uid": "github/iterize/tenta", "html_url": "https://rseng.github.io/software/repository/github/iterize/tenta", "api_url": "https://rseng.github.io/software/api/repos/github/iterize/tenta"}, {"uid": "github/anddssan/CLOUDe", "html_url": "https://rseng.github.io/software/repository/github/anddssan/CLOUDe", "api_url": "https://rseng.github.io/software/api/repos/github/anddssan/CLOUDe"}, {"uid": "github/TinkerTools/Tinker-HP", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/Tinker-HP", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/Tinker-HP"}, {"uid": "github/TinkerTools/tinker9", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/tinker9", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/tinker9"}, {"uid": "github/samsledje/ConPLex_dev", "html_url": "https://rseng.github.io/software/repository/github/samsledje/ConPLex_dev", "api_url": "https://rseng.github.io/software/api/repos/github/samsledje/ConPLex_dev"}, {"uid": "github/ziyewang/ARG_SHINE", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/ARG_SHINE", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/ARG_SHINE"}, {"uid": "github/ziyewang/MetaBinner", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/MetaBinner", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/MetaBinner"}, {"uid": "github/nlesc-dirac/sagecal", "html_url": "https://rseng.github.io/software/repository/github/nlesc-dirac/sagecal", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-dirac/sagecal"}, {"uid": "github/milicolazo/Pyedra", "html_url": "https://rseng.github.io/software/repository/github/milicolazo/Pyedra", "api_url": "https://rseng.github.io/software/api/repos/github/milicolazo/Pyedra"}, {"uid": "github/SJLeo/FFSD", "html_url": "https://rseng.github.io/software/repository/github/SJLeo/FFSD", "api_url": "https://rseng.github.io/software/api/repos/github/SJLeo/FFSD"}, {"uid": "github/LalResearchGroup/CNV-clinviewer", "html_url": "https://rseng.github.io/software/repository/github/LalResearchGroup/CNV-clinviewer", "api_url": "https://rseng.github.io/software/api/repos/github/LalResearchGroup/CNV-clinviewer"}, {"uid": "github/arabic-digital-humanities/adhtools", "html_url": "https://rseng.github.io/software/repository/github/arabic-digital-humanities/adhtools", "api_url": "https://rseng.github.io/software/api/repos/github/arabic-digital-humanities/adhtools"}, {"uid": "github/pixixiaonaogou/MLSDR", "html_url": "https://rseng.github.io/software/repository/github/pixixiaonaogou/MLSDR", "api_url": "https://rseng.github.io/software/api/repos/github/pixixiaonaogou/MLSDR"}, {"uid": "github/omuse-geoscience/omuse", "html_url": "https://rseng.github.io/software/repository/github/omuse-geoscience/omuse", "api_url": "https://rseng.github.io/software/api/repos/github/omuse-geoscience/omuse"}, {"uid": "github/Yingjie4Science/SDGdetector", "html_url": "https://rseng.github.io/software/repository/github/Yingjie4Science/SDGdetector", "api_url": "https://rseng.github.io/software/api/repos/github/Yingjie4Science/SDGdetector"}, {"uid": "github/HalHaggard/EARL", "html_url": "https://rseng.github.io/software/repository/github/HalHaggard/EARL", "api_url": "https://rseng.github.io/software/api/repos/github/HalHaggard/EARL"}, {"uid": "github/IPK-BIT/divbrowse", "html_url": "https://rseng.github.io/software/repository/github/IPK-BIT/divbrowse", "api_url": "https://rseng.github.io/software/api/repos/github/IPK-BIT/divbrowse"}, {"uid": "github/LiShuTJ/NDNet", "html_url": "https://rseng.github.io/software/repository/github/LiShuTJ/NDNet", "api_url": "https://rseng.github.io/software/api/repos/github/LiShuTJ/NDNet"}, {"uid": "github/hartwigmedical/hmftools", "html_url": "https://rseng.github.io/software/repository/github/hartwigmedical/hmftools", "api_url": "https://rseng.github.io/software/api/repos/github/hartwigmedical/hmftools"}, {"uid": "github/thomasdenecker/START-R", "html_url": "https://rseng.github.io/software/repository/github/thomasdenecker/START-R", "api_url": "https://rseng.github.io/software/api/repos/github/thomasdenecker/START-R"}, {"uid": "github/chenjj2/forecaster", "html_url": "https://rseng.github.io/software/repository/github/chenjj2/forecaster", "api_url": "https://rseng.github.io/software/api/repos/github/chenjj2/forecaster"}, {"uid": "github/jfmrod/MAPseq", "html_url": "https://rseng.github.io/software/repository/github/jfmrod/MAPseq", "api_url": "https://rseng.github.io/software/api/repos/github/jfmrod/MAPseq"}, {"uid": "github/wordsworthgroup/mars_redox_2021", "html_url": "https://rseng.github.io/software/repository/github/wordsworthgroup/mars_redox_2021", "api_url": "https://rseng.github.io/software/api/repos/github/wordsworthgroup/mars_redox_2021"}, {"uid": "github/pyFFTW/pyFFTW", "html_url": "https://rseng.github.io/software/repository/github/pyFFTW/pyFFTW", "api_url": "https://rseng.github.io/software/api/repos/github/pyFFTW/pyFFTW"}, {"uid": "github/jradcliffe5/multi_self_cal", "html_url": "https://rseng.github.io/software/repository/github/jradcliffe5/multi_self_cal", "api_url": "https://rseng.github.io/software/api/repos/github/jradcliffe5/multi_self_cal"}, {"uid": "github/pedronachtigall/ToxCodAn-Genome", "html_url": "https://rseng.github.io/software/repository/github/pedronachtigall/ToxCodAn-Genome", "api_url": "https://rseng.github.io/software/api/repos/github/pedronachtigall/ToxCodAn-Genome"}, {"uid": "github/RECETOX/recetox-xMSannotator", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-xMSannotator", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-xMSannotator"}, {"uid": "github/RECETOX/wtv", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/wtv", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/wtv"}, {"uid": "github/RECETOX/recetox-msfinder", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-msfinder", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-msfinder"}, {"uid": "github/RECETOX/MSMetaEnhancer", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/MSMetaEnhancer", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/MSMetaEnhancer"}, {"uid": "github/RECETOX/recetox-aplcms", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-aplcms", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-aplcms"}, {"uid": "github/RECETOX/RIAssigner", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/RIAssigner", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/RIAssigner"}, {"uid": "github/jellis18/PTMCMCSampler", "html_url": "https://rseng.github.io/software/repository/github/jellis18/PTMCMCSampler", "api_url": "https://rseng.github.io/software/api/repos/github/jellis18/PTMCMCSampler"}, {"uid": "github/antoinediez/Sisyphe", "html_url": "https://rseng.github.io/software/repository/github/antoinediez/Sisyphe", "api_url": "https://rseng.github.io/software/api/repos/github/antoinediez/Sisyphe"}, {"uid": "github/COVID-IWG/epimargin", "html_url": "https://rseng.github.io/software/repository/github/COVID-IWG/epimargin", "api_url": "https://rseng.github.io/software/api/repos/github/COVID-IWG/epimargin"}, {"uid": "github/philip-long/constrained_manipulability", "html_url": "https://rseng.github.io/software/repository/github/philip-long/constrained_manipulability", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/constrained_manipulability"}, {"uid": "github/philip-long/robot_collision_checking", "html_url": "https://rseng.github.io/software/repository/github/philip-long/robot_collision_checking", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/robot_collision_checking"}, {"uid": "github/SevgiAkten/pycellga", "html_url": "https://rseng.github.io/software/repository/github/SevgiAkten/pycellga", "api_url": "https://rseng.github.io/software/api/repos/github/SevgiAkten/pycellga"}, {"uid": "github/seung-lab/FlyWirePaper", "html_url": "https://rseng.github.io/software/repository/github/seung-lab/FlyWirePaper", "api_url": "https://rseng.github.io/software/api/repos/github/seung-lab/FlyWirePaper"}, {"uid": "github/Schulik/aiolos", "html_url": "https://rseng.github.io/software/repository/github/Schulik/aiolos", "api_url": "https://rseng.github.io/software/api/repos/github/Schulik/aiolos"}, {"uid": "github/ryanhausen/fitsmap", "html_url": "https://rseng.github.io/software/repository/github/ryanhausen/fitsmap", "api_url": "https://rseng.github.io/software/api/repos/github/ryanhausen/fitsmap"}, {"uid": "github/bsafdi/stellarWakes", "html_url": "https://rseng.github.io/software/repository/github/bsafdi/stellarWakes", "api_url": "https://rseng.github.io/software/api/repos/github/bsafdi/stellarWakes"}, {"uid": "github/akinremisa/rfsed", "html_url": "https://rseng.github.io/software/repository/github/akinremisa/rfsed", "api_url": "https://rseng.github.io/software/api/repos/github/akinremisa/rfsed"}, {"uid": "github/TianlaiProject/tlpipe", "html_url": "https://rseng.github.io/software/repository/github/TianlaiProject/tlpipe", "api_url": "https://rseng.github.io/software/api/repos/github/TianlaiProject/tlpipe"}, {"uid": "github/cosmoinin/MGPT", "html_url": "https://rseng.github.io/software/repository/github/cosmoinin/MGPT", "api_url": "https://rseng.github.io/software/api/repos/github/cosmoinin/MGPT"}, {"uid": "github/nivha/three_body_integration", "html_url": "https://rseng.github.io/software/repository/github/nivha/three_body_integration", "api_url": "https://rseng.github.io/software/api/repos/github/nivha/three_body_integration"}, {"uid": "github/devries/analytic_infall", "html_url": "https://rseng.github.io/software/repository/github/devries/analytic_infall", "api_url": "https://rseng.github.io/software/api/repos/github/devries/analytic_infall"}, {"uid": "github/icrar/daliuge", "html_url": "https://rseng.github.io/software/repository/github/icrar/daliuge", "api_url": "https://rseng.github.io/software/api/repos/github/icrar/daliuge"}, {"uid": "github/spm/spm", "html_url": "https://rseng.github.io/software/repository/github/spm/spm", "api_url": "https://rseng.github.io/software/api/repos/github/spm/spm"}, {"uid": "github/user29A/fastrometry", "html_url": "https://rseng.github.io/software/repository/github/user29A/fastrometry", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/fastrometry"}, {"uid": "github/user29A/CCDLAB", "html_url": "https://rseng.github.io/software/repository/github/user29A/CCDLAB", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/CCDLAB"}, {"uid": "github/user29A/JPFITS", "html_url": "https://rseng.github.io/software/repository/github/user29A/JPFITS", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/JPFITS"}, {"uid": "github/korcsmarosgroup/CytokineLink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/CytokineLink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/CytokineLink"}, {"uid": "github/korcsmarosgroup/TFlink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/TFlink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/TFlink"}, {"uid": "github/uedaLabR/nanoDoc", "html_url": "https://rseng.github.io/software/repository/github/uedaLabR/nanoDoc", "api_url": "https://rseng.github.io/software/api/repos/github/uedaLabR/nanoDoc"}, {"uid": "github/samaygarg/fuelcell", "html_url": "https://rseng.github.io/software/repository/github/samaygarg/fuelcell", "api_url": "https://rseng.github.io/software/api/repos/github/samaygarg/fuelcell"}, {"uid": "github/roban/CosmoloPy", "html_url": "https://rseng.github.io/software/repository/github/roban/CosmoloPy", "api_url": "https://rseng.github.io/software/api/repos/github/roban/CosmoloPy"}, {"uid": "github/danielenricocahall/elephas", "html_url": "https://rseng.github.io/software/repository/github/danielenricocahall/elephas", "api_url": "https://rseng.github.io/software/api/repos/github/danielenricocahall/elephas"}, {"uid": "github/andrew-saydjari/CloudCovErr.jl", "html_url": "https://rseng.github.io/software/repository/github/andrew-saydjari/CloudCovErr.jl", "api_url": "https://rseng.github.io/software/api/repos/github/andrew-saydjari/CloudCovErr.jl"}, {"uid": "github/JakobBD/pounce", "html_url": "https://rseng.github.io/software/repository/github/JakobBD/pounce", "api_url": "https://rseng.github.io/software/api/repos/github/JakobBD/pounce"}, {"uid": "github/hanyk/BayeSED3", "html_url": "https://rseng.github.io/software/repository/github/hanyk/BayeSED3", "api_url": "https://rseng.github.io/software/api/repos/github/hanyk/BayeSED3"}, {"uid": "github/andizq/sf3dmodels", "html_url": "https://rseng.github.io/software/repository/github/andizq/sf3dmodels", "api_url": "https://rseng.github.io/software/api/repos/github/andizq/sf3dmodels"}, {"uid": "github/nkhorshid/simab", "html_url": "https://rseng.github.io/software/repository/github/nkhorshid/simab", "api_url": "https://rseng.github.io/software/api/repos/github/nkhorshid/simab"}, {"uid": "github/RelNucAs/bns_nurates", "html_url": "https://rseng.github.io/software/repository/github/RelNucAs/bns_nurates", "api_url": "https://rseng.github.io/software/api/repos/github/RelNucAs/bns_nurates"}, {"uid": "github/nickhand/pyRSD", "html_url": "https://rseng.github.io/software/repository/github/nickhand/pyRSD", "api_url": "https://rseng.github.io/software/api/repos/github/nickhand/pyRSD"}, {"uid": "github/PIK-LPJmL/lpjmlkit", "html_url": "https://rseng.github.io/software/repository/github/PIK-LPJmL/lpjmlkit", "api_url": "https://rseng.github.io/software/api/repos/github/PIK-LPJmL/lpjmlkit"}, {"uid": "github/vrodgom/statmorph", "html_url": "https://rseng.github.io/software/repository/github/vrodgom/statmorph", "api_url": "https://rseng.github.io/software/api/repos/github/vrodgom/statmorph"}, {"uid": "github/phillippro/pexo", "html_url": "https://rseng.github.io/software/repository/github/phillippro/pexo", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/pexo"}, {"uid": "github/phillippro/agatha", "html_url": "https://rseng.github.io/software/repository/github/phillippro/agatha", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/agatha"}, {"uid": "github/dtamayo/reboundx", "html_url": "https://rseng.github.io/software/repository/github/dtamayo/reboundx", "api_url": "https://rseng.github.io/software/api/repos/github/dtamayo/reboundx"}, {"uid": "github/stan-dev/stan", "html_url": "https://rseng.github.io/software/repository/github/stan-dev/stan", "api_url": "https://rseng.github.io/software/api/repos/github/stan-dev/stan"}, {"uid": "github/benallard/galileo", "html_url": "https://rseng.github.io/software/repository/github/benallard/galileo", "api_url": "https://rseng.github.io/software/api/repos/github/benallard/galileo"}, {"uid": "github/dspelaez/extended-wdm", "html_url": "https://rseng.github.io/software/repository/github/dspelaez/extended-wdm", "api_url": "https://rseng.github.io/software/api/repos/github/dspelaez/extended-wdm"}, {"uid": "github/edbiomedai/scmorph", "html_url": "https://rseng.github.io/software/repository/github/edbiomedai/scmorph", "api_url": "https://rseng.github.io/software/api/repos/github/edbiomedai/scmorph"}, {"uid": "github/ouyang-lab/PRAS", "html_url": "https://rseng.github.io/software/repository/github/ouyang-lab/PRAS", "api_url": "https://rseng.github.io/software/api/repos/github/ouyang-lab/PRAS"}, {"uid": "github/egstrom/cluster-in-a-box", "html_url": "https://rseng.github.io/software/repository/github/egstrom/cluster-in-a-box", "api_url": "https://rseng.github.io/software/api/repos/github/egstrom/cluster-in-a-box"}, {"uid": "github/Smith42/pix2prof", "html_url": "https://rseng.github.io/software/repository/github/Smith42/pix2prof", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/pix2prof"}, {"uid": "github/Smith42/astroPT", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroPT", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroPT"}, {"uid": "github/Smith42/astroddpm", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroddpm", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroddpm"}, {"uid": "github/Smith42/XDF-GAN", "html_url": "https://rseng.github.io/software/repository/github/Smith42/XDF-GAN", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/XDF-GAN"}, {"uid": "github/cmzmasek/forester", "html_url": "https://rseng.github.io/software/repository/github/cmzmasek/forester", "api_url": "https://rseng.github.io/software/api/repos/github/cmzmasek/forester"}, {"uid": "github/arviz-devs/preliz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/preliz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/preliz"}, {"uid": "github/arviz-devs/arviz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/arviz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/arviz"}, {"uid": "github/Gabaldonlab/jloh", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/jloh", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/jloh"}, {"uid": "github/Gabaldonlab/perSVade", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/perSVade", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/perSVade"}, {"uid": "github/Gabaldonlab/crossmapper", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/crossmapper", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/crossmapper"}, {"uid": "github/Gabaldonlab/karyon", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/karyon", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/karyon"}, {"uid": "github/supsi-dacd-isaac/BayesReconPy", "html_url": "https://rseng.github.io/software/repository/github/supsi-dacd-isaac/BayesReconPy", "api_url": "https://rseng.github.io/software/api/repos/github/supsi-dacd-isaac/BayesReconPy"}, {"uid": "github/richteague/gofish", "html_url": "https://rseng.github.io/software/repository/github/richteague/gofish", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/gofish"}, {"uid": "github/richteague/disksurf", "html_url": "https://rseng.github.io/software/repository/github/richteague/disksurf", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/disksurf"}, {"uid": "github/richteague/bettermoments", "html_url": "https://rseng.github.io/software/repository/github/richteague/bettermoments", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/bettermoments"}, {"uid": "github/richteague/eddy", "html_url": "https://rseng.github.io/software/repository/github/richteague/eddy", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/eddy"}, {"uid": "github/ClapeyronThermo/GCIdentifier.jl", "html_url": "https://rseng.github.io/software/repository/github/ClapeyronThermo/GCIdentifier.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ClapeyronThermo/GCIdentifier.jl"}, {"uid": "github/KALMUS-Color-Toolkit/KALMUS", "html_url": "https://rseng.github.io/software/repository/github/KALMUS-Color-Toolkit/KALMUS", "api_url": "https://rseng.github.io/software/api/repos/github/KALMUS-Color-Toolkit/KALMUS"}, {"uid": "github/jlustigy/coronagraph", "html_url": "https://rseng.github.io/software/repository/github/jlustigy/coronagraph", "api_url": "https://rseng.github.io/software/api/repos/github/jlustigy/coronagraph"}, {"uid": "github/reznik-lab/MIRTH", "html_url": "https://rseng.github.io/software/repository/github/reznik-lab/MIRTH", "api_url": "https://rseng.github.io/software/api/repos/github/reznik-lab/MIRTH"}, {"uid": "github/davidpamos/MultiModes", "html_url": "https://rseng.github.io/software/repository/github/davidpamos/MultiModes", "api_url": "https://rseng.github.io/software/api/repos/github/davidpamos/MultiModes"}, {"uid": "github/nrao/UniPOPS", "html_url": "https://rseng.github.io/software/repository/github/nrao/UniPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/nrao/UniPOPS"}, {"uid": "github/esperlman/JetCurry", "html_url": "https://rseng.github.io/software/repository/github/esperlman/JetCurry", "api_url": "https://rseng.github.io/software/api/repos/github/esperlman/JetCurry"}, {"uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", "html_url": "https://rseng.github.io/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", "api_url": "https://rseng.github.io/software/api/repos/github/BDI-pathogens/OpenABM-Covid19-model-paper"}, {"uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "html_url": "https://rseng.github.io/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/leonidprinceton/LightweightSpaceCoronagraphSimulator"}, {"uid": "github/ctian282/DeepSSM", "html_url": "https://rseng.github.io/software/repository/github/ctian282/DeepSSM", "api_url": "https://rseng.github.io/software/api/repos/github/ctian282/DeepSSM"}, {"uid": "github/davidhoksza/traveler", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/traveler", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/traveler"}, {"uid": "github/davidhoksza/MolArt", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/MolArt", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/MolArt"}, {"uid": "github/neuroneural/brainchop", "html_url": "https://rseng.github.io/software/repository/github/neuroneural/brainchop", "api_url": "https://rseng.github.io/software/api/repos/github/neuroneural/brainchop"}, {"uid": "github/evanhockings/QuantumACES.jl", "html_url": "https://rseng.github.io/software/repository/github/evanhockings/QuantumACES.jl", "api_url": "https://rseng.github.io/software/api/repos/github/evanhockings/QuantumACES.jl"}, {"uid": "github/bshoshany/OGRe", "html_url": "https://rseng.github.io/software/repository/github/bshoshany/OGRe", "api_url": "https://rseng.github.io/software/api/repos/github/bshoshany/OGRe"}, {"uid": "github/jfarek/xatlas", "html_url": "https://rseng.github.io/software/repository/github/jfarek/xatlas", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/xatlas"}, {"uid": "github/jfarek/alignstats", "html_url": "https://rseng.github.io/software/repository/github/jfarek/alignstats", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/alignstats"}, {"uid": "github/etal/cnvkit", "html_url": "https://rseng.github.io/software/repository/github/etal/cnvkit", "api_url": "https://rseng.github.io/software/api/repos/github/etal/cnvkit"}, {"uid": "github/LiberTEM/LiberTEM", "html_url": "https://rseng.github.io/software/repository/github/LiberTEM/LiberTEM", "api_url": "https://rseng.github.io/software/api/repos/github/LiberTEM/LiberTEM"}, {"uid": "github/iancze/PSOAP", "html_url": "https://rseng.github.io/software/repository/github/iancze/PSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/PSOAP"}, {"uid": "github/iancze/DiskJockey", "html_url": "https://rseng.github.io/software/repository/github/iancze/DiskJockey", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/DiskJockey"}, {"uid": "github/kwkx/IPRP", "html_url": "https://rseng.github.io/software/repository/github/kwkx/IPRP", "api_url": "https://rseng.github.io/software/api/repos/github/kwkx/IPRP"}, {"uid": "github/aschafu/PSSH2", "html_url": "https://rseng.github.io/software/repository/github/aschafu/PSSH2", "api_url": "https://rseng.github.io/software/api/repos/github/aschafu/PSSH2"}, {"uid": "github/VALENCE-software/VALENCE", "html_url": "https://rseng.github.io/software/repository/github/VALENCE-software/VALENCE", "api_url": "https://rseng.github.io/software/api/repos/github/VALENCE-software/VALENCE"}, {"uid": "github/ToyotaCRDL/mahos", "html_url": "https://rseng.github.io/software/repository/github/ToyotaCRDL/mahos", "api_url": "https://rseng.github.io/software/api/repos/github/ToyotaCRDL/mahos"}, {"uid": "github/csdms/bmi", "html_url": "https://rseng.github.io/software/repository/github/csdms/bmi", "api_url": "https://rseng.github.io/software/api/repos/github/csdms/bmi"}, {"uid": "github/dankelley/oce", "html_url": "https://rseng.github.io/software/repository/github/dankelley/oce", "api_url": "https://rseng.github.io/software/api/repos/github/dankelley/oce"}, {"uid": "github/mmann1123/xr_fresh", "html_url": "https://rseng.github.io/software/repository/github/mmann1123/xr_fresh", "api_url": "https://rseng.github.io/software/api/repos/github/mmann1123/xr_fresh"}, {"uid": "github/JSB-UCLA/scPNMF", "html_url": "https://rseng.github.io/software/repository/github/JSB-UCLA/scPNMF", "api_url": "https://rseng.github.io/software/api/repos/github/JSB-UCLA/scPNMF"}, {"uid": "github/nikhilroxtomar/FANet", "html_url": "https://rseng.github.io/software/repository/github/nikhilroxtomar/FANet", "api_url": "https://rseng.github.io/software/api/repos/github/nikhilroxtomar/FANet"}, {"uid": "github/hues-platform/cesar-p-core", "html_url": "https://rseng.github.io/software/repository/github/hues-platform/cesar-p-core", "api_url": "https://rseng.github.io/software/api/repos/github/hues-platform/cesar-p-core"}, {"uid": "github/volkamerlab/opencadd", "html_url": "https://rseng.github.io/software/repository/github/volkamerlab/opencadd", "api_url": "https://rseng.github.io/software/api/repos/github/volkamerlab/opencadd"}, {"uid": "github/li-shaochuan/SEDIM", "html_url": "https://rseng.github.io/software/repository/github/li-shaochuan/SEDIM", "api_url": "https://rseng.github.io/software/api/repos/github/li-shaochuan/SEDIM"}, {"uid": "github/D-Crake/HEADSS", "html_url": "https://rseng.github.io/software/repository/github/D-Crake/HEADSS", "api_url": "https://rseng.github.io/software/api/repos/github/D-Crake/HEADSS"}, {"uid": "github/4DModeller/fdmr", "html_url": "https://rseng.github.io/software/repository/github/4DModeller/fdmr", "api_url": "https://rseng.github.io/software/api/repos/github/4DModeller/fdmr"}, {"uid": "github/malonge/RagTag", "html_url": "https://rseng.github.io/software/repository/github/malonge/RagTag", "api_url": "https://rseng.github.io/software/api/repos/github/malonge/RagTag"}, {"uid": "github/Nic5472K/ScientificData2021_HealthGym", "html_url": "https://rseng.github.io/software/repository/github/Nic5472K/ScientificData2021_HealthGym", "api_url": "https://rseng.github.io/software/api/repos/github/Nic5472K/ScientificData2021_HealthGym"}, {"uid": "github/RobertHTyler/TROPF", "html_url": "https://rseng.github.io/software/repository/github/RobertHTyler/TROPF", "api_url": "https://rseng.github.io/software/api/repos/github/RobertHTyler/TROPF"}, {"uid": "github/tscnlab/LightLogR", "html_url": "https://rseng.github.io/software/repository/github/tscnlab/LightLogR", "api_url": "https://rseng.github.io/software/api/repos/github/tscnlab/LightLogR"}, {"uid": "github/SegataLab/lefse", "html_url": "https://rseng.github.io/software/repository/github/SegataLab/lefse", "api_url": "https://rseng.github.io/software/api/repos/github/SegataLab/lefse"}, {"uid": "github/HingeAssembler/HINGE", "html_url": "https://rseng.github.io/software/repository/github/HingeAssembler/HINGE", "api_url": "https://rseng.github.io/software/api/repos/github/HingeAssembler/HINGE"}, {"uid": "github/exosports/MARGE", "html_url": "https://rseng.github.io/software/repository/github/exosports/MARGE", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/MARGE"}, {"uid": "github/exosports/homer", "html_url": "https://rseng.github.io/software/repository/github/exosports/homer", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/homer"}, {"uid": "github/exosports/transit", "html_url": "https://rseng.github.io/software/repository/github/exosports/transit", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/transit"}, {"uid": "github/exosports/BART", "html_url": "https://rseng.github.io/software/repository/github/exosports/BART", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/BART"}, {"uid": "github/dftd3/simple-dftd3", "html_url": "https://rseng.github.io/software/repository/github/dftd3/simple-dftd3", "api_url": "https://rseng.github.io/software/api/repos/github/dftd3/simple-dftd3"}, {"uid": "github/BritishGeologicalSurvey/pyvolcans", "html_url": "https://rseng.github.io/software/repository/github/BritishGeologicalSurvey/pyvolcans", "api_url": "https://rseng.github.io/software/api/repos/github/BritishGeologicalSurvey/pyvolcans"}, {"uid": "github/devosoft/avida", "html_url": "https://rseng.github.io/software/repository/github/devosoft/avida", "api_url": "https://rseng.github.io/software/api/repos/github/devosoft/avida"}, {"uid": "github/mglodge/MANTA-Ray", "html_url": "https://rseng.github.io/software/repository/github/mglodge/MANTA-Ray", "api_url": "https://rseng.github.io/software/api/repos/github/mglodge/MANTA-Ray"}, {"uid": "github/juzikong/photGalIMF", "html_url": "https://rseng.github.io/software/repository/github/juzikong/photGalIMF", "api_url": "https://rseng.github.io/software/api/repos/github/juzikong/photGalIMF"}, {"uid": "github/1313e/PRISM", "html_url": "https://rseng.github.io/software/repository/github/1313e/PRISM", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/PRISM"}, {"uid": "github/1313e/CMasher", "html_url": "https://rseng.github.io/software/repository/github/1313e/CMasher", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/CMasher"}, {"uid": "github/rdicosmo/parmap", "html_url": "https://rseng.github.io/software/repository/github/rdicosmo/parmap", "api_url": "https://rseng.github.io/software/api/repos/github/rdicosmo/parmap"}, {"uid": "github/segasai/rvspecfit", "html_url": "https://rseng.github.io/software/repository/github/segasai/rvspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/rvspecfit"}, {"uid": "github/segasai/q3c", "html_url": "https://rseng.github.io/software/repository/github/segasai/q3c", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/q3c"}, {"uid": "github/captain-exoplanet/misttborn", "html_url": "https://rseng.github.io/software/repository/github/captain-exoplanet/misttborn", "api_url": "https://rseng.github.io/software/api/repos/github/captain-exoplanet/misttborn"}, {"uid": "github/Hi-COLACode/Hi-COLA", "html_url": "https://rseng.github.io/software/repository/github/Hi-COLACode/Hi-COLA", "api_url": "https://rseng.github.io/software/api/repos/github/Hi-COLACode/Hi-COLA"}, {"uid": "github/bxlab/metaWRAP", "html_url": "https://rseng.github.io/software/repository/github/bxlab/metaWRAP", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/metaWRAP"}, {"uid": "github/bxlab/bx-python", "html_url": "https://rseng.github.io/software/repository/github/bxlab/bx-python", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/bx-python"}, {"uid": "github/NCAS-CMS/cfdm", "html_url": "https://rseng.github.io/software/repository/github/NCAS-CMS/cfdm", "api_url": "https://rseng.github.io/software/api/repos/github/NCAS-CMS/cfdm"}, {"uid": "github/legolason/PyQSOFit", "html_url": "https://rseng.github.io/software/repository/github/legolason/PyQSOFit", "api_url": "https://rseng.github.io/software/api/repos/github/legolason/PyQSOFit"}, {"uid": "github/solerjuan/magnetar", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/magnetar", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/magnetar"}, {"uid": "github/solerjuan/astroHOG", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/astroHOG", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/astroHOG"}, {"uid": "github/dmey/synthia", "html_url": "https://rseng.github.io/software/repository/github/dmey/synthia", "api_url": "https://rseng.github.io/software/api/repos/github/dmey/synthia"}, {"uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", "html_url": "https://rseng.github.io/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", "api_url": "https://rseng.github.io/software/api/repos/github/earth-metabolome-initiative/earth_metabolome_ontology"}, {"uid": "github/AIgnesti/PT-REX", "html_url": "https://rseng.github.io/software/repository/github/AIgnesti/PT-REX", "api_url": "https://rseng.github.io/software/api/repos/github/AIgnesti/PT-REX"}, {"uid": "github/mmp2/megaman", "html_url": "https://rseng.github.io/software/repository/github/mmp2/megaman", "api_url": "https://rseng.github.io/software/api/repos/github/mmp2/megaman"}, {"uid": "github/pytorch/vision", "html_url": "https://rseng.github.io/software/repository/github/pytorch/vision", "api_url": "https://rseng.github.io/software/api/repos/github/pytorch/vision"}, {"uid": "github/ncbi/BAMscale", "html_url": "https://rseng.github.io/software/repository/github/ncbi/BAMscale", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/BAMscale"}, {"uid": "github/ncbi/TPMCalculator", "html_url": "https://rseng.github.io/software/repository/github/ncbi/TPMCalculator", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/TPMCalculator"}, {"uid": "github/ncbi/datasets", "html_url": "https://rseng.github.io/software/repository/github/ncbi/datasets", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/datasets"}, {"uid": "github/ncbi/SRPRISM", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SRPRISM", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SRPRISM"}, {"uid": "github/ncbi/ngs", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ngs", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ngs"}, {"uid": "github/ncbi/sra-tools", "html_url": "https://rseng.github.io/software/repository/github/ncbi/sra-tools", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/sra-tools"}, {"uid": "github/ncbi/SKESA", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SKESA", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SKESA"}, {"uid": "github/ncbi/igblast", "html_url": "https://rseng.github.io/software/repository/github/ncbi/igblast", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/igblast"}, {"uid": "github/ncbi/vadr", "html_url": "https://rseng.github.io/software/repository/github/ncbi/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/vadr"}, {"uid": "github/ncbi/ncbi-vdb", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ncbi-vdb", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ncbi-vdb"}, {"uid": "github/AstroAccelerateOrg/astro-accelerate", "html_url": "https://rseng.github.io/software/repository/github/AstroAccelerateOrg/astro-accelerate", "api_url": "https://rseng.github.io/software/api/repos/github/AstroAccelerateOrg/astro-accelerate"}, {"uid": "github/cieslar/Indri", "html_url": "https://rseng.github.io/software/repository/github/cieslar/Indri", "api_url": "https://rseng.github.io/software/api/repos/github/cieslar/Indri"}, {"uid": "github/RomainFeron/mwga-utils", "html_url": "https://rseng.github.io/software/repository/github/RomainFeron/mwga-utils", "api_url": "https://rseng.github.io/software/api/repos/github/RomainFeron/mwga-utils"}, {"uid": "github/AlexanderBartholomaeus/smORFer", "html_url": "https://rseng.github.io/software/repository/github/AlexanderBartholomaeus/smORFer", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderBartholomaeus/smORFer"}, {"uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", "html_url": "https://rseng.github.io/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/R-Vessel-X/SlicerRVXLiverSegmentation"}, {"uid": "github/davidechicco/geneExpressionFromGEO", "html_url": "https://rseng.github.io/software/repository/github/davidechicco/geneExpressionFromGEO", "api_url": "https://rseng.github.io/software/api/repos/github/davidechicco/geneExpressionFromGEO"}, {"uid": "github/equipeGST/RiboDoc", "html_url": "https://rseng.github.io/software/repository/github/equipeGST/RiboDoc", "api_url": "https://rseng.github.io/software/api/repos/github/equipeGST/RiboDoc"}, {"uid": "github/andreyshabalin/TwinEQTL", "html_url": "https://rseng.github.io/software/repository/github/andreyshabalin/TwinEQTL", "api_url": "https://rseng.github.io/software/api/repos/github/andreyshabalin/TwinEQTL"}, {"uid": "github/mtazzari/uvplot", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/uvplot", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/uvplot"}, {"uid": "github/mtazzari/galario", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/galario", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/galario"}, {"uid": "github/mtazzari/binary", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/binary", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/binary"}, {"uid": "github/Schuch666/eva3dm", "html_url": "https://rseng.github.io/software/repository/github/Schuch666/eva3dm", "api_url": "https://rseng.github.io/software/api/repos/github/Schuch666/eva3dm"}, {"uid": "github/twopin/CAMP", "html_url": "https://rseng.github.io/software/repository/github/twopin/CAMP", "api_url": "https://rseng.github.io/software/api/repos/github/twopin/CAMP"}, {"uid": "github/yrkhalil/SPIBACK", "html_url": "https://rseng.github.io/software/repository/github/yrkhalil/SPIBACK", "api_url": "https://rseng.github.io/software/api/repos/github/yrkhalil/SPIBACK"}, {"uid": "github/cas-bioinf/rboAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/cas-bioinf/rboAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/cas-bioinf/rboAnalyzer"}, {"uid": "github/sheydenreich/threepoint", "html_url": "https://rseng.github.io/software/repository/github/sheydenreich/threepoint", "api_url": "https://rseng.github.io/software/api/repos/github/sheydenreich/threepoint"}, {"uid": "github/umami-hep/salt", "html_url": "https://rseng.github.io/software/repository/github/umami-hep/salt", "api_url": "https://rseng.github.io/software/api/repos/github/umami-hep/salt"}, {"uid": "github/spack/spack", "html_url": "https://rseng.github.io/software/repository/github/spack/spack", "api_url": "https://rseng.github.io/software/api/repos/github/spack/spack"}, {"uid": "github/markfortune/luas", "html_url": "https://rseng.github.io/software/repository/github/markfortune/luas", "api_url": "https://rseng.github.io/software/api/repos/github/markfortune/luas"}, {"uid": "github/eScatter/pyelsepa", "html_url": "https://rseng.github.io/software/repository/github/eScatter/pyelsepa", "api_url": "https://rseng.github.io/software/api/repos/github/eScatter/pyelsepa"}, {"uid": "github/snakemake/snakemake", "html_url": "https://rseng.github.io/software/repository/github/snakemake/snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/snakemake/snakemake"}, {"uid": "github/JuliaManifolds/Manopt.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaManifolds/Manopt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaManifolds/Manopt.jl"}, {"uid": "github/BioMedIA/MIRTK", "html_url": "https://rseng.github.io/software/repository/github/BioMedIA/MIRTK", "api_url": "https://rseng.github.io/software/api/repos/github/BioMedIA/MIRTK"}, {"uid": "github/matsen/pplacer", "html_url": "https://rseng.github.io/software/repository/github/matsen/pplacer", "api_url": "https://rseng.github.io/software/api/repos/github/matsen/pplacer"}, {"uid": "github/ni1o1/transbigdata", "html_url": "https://rseng.github.io/software/repository/github/ni1o1/transbigdata", "api_url": "https://rseng.github.io/software/api/repos/github/ni1o1/transbigdata"}, {"uid": "github/popgenmethods/smcpp", "html_url": "https://rseng.github.io/software/repository/github/popgenmethods/smcpp", "api_url": "https://rseng.github.io/software/api/repos/github/popgenmethods/smcpp"}, {"uid": "github/tardis-sn/tardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/tardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/tardis"}, {"uid": "github/tardis-sn/carsus", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/carsus", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/carsus"}, {"uid": "github/tardis-sn/stardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/stardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/stardis"}, {"uid": "github/Guo-Jian-Wang/colfi", "html_url": "https://rseng.github.io/software/repository/github/Guo-Jian-Wang/colfi", "api_url": "https://rseng.github.io/software/api/repos/github/Guo-Jian-Wang/colfi"}, {"uid": "github/MrOlm/drep", "html_url": "https://rseng.github.io/software/repository/github/MrOlm/drep", "api_url": "https://rseng.github.io/software/api/repos/github/MrOlm/drep"}, {"uid": "github/Qepanna/goFlux", "html_url": "https://rseng.github.io/software/repository/github/Qepanna/goFlux", "api_url": "https://rseng.github.io/software/api/repos/github/Qepanna/goFlux"}, {"uid": "github/jsh58/Genrich", "html_url": "https://rseng.github.io/software/repository/github/jsh58/Genrich", "api_url": "https://rseng.github.io/software/api/repos/github/jsh58/Genrich"}, {"uid": "github/BjoernBiltzinger/pyspi", "html_url": "https://rseng.github.io/software/repository/github/BjoernBiltzinger/pyspi", "api_url": "https://rseng.github.io/software/api/repos/github/BjoernBiltzinger/pyspi"}, {"uid": "github/dnafinder/uroccomp", "html_url": "https://rseng.github.io/software/repository/github/dnafinder/uroccomp", "api_url": "https://rseng.github.io/software/api/repos/github/dnafinder/uroccomp"}, {"uid": "github/nanograv/enterprise", "html_url": "https://rseng.github.io/software/repository/github/nanograv/enterprise", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/enterprise"}, {"uid": "github/nanograv/PINT", "html_url": "https://rseng.github.io/software/repository/github/nanograv/PINT", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/PINT"}, {"uid": "github/jiwoncpark/baobab", "html_url": "https://rseng.github.io/software/repository/github/jiwoncpark/baobab", "api_url": "https://rseng.github.io/software/api/repos/github/jiwoncpark/baobab"}, {"uid": "github/icbm-iupui/STAFF", "html_url": "https://rseng.github.io/software/repository/github/icbm-iupui/STAFF", "api_url": "https://rseng.github.io/software/api/repos/github/icbm-iupui/STAFF"}, {"uid": "github/BoPeng/simuPOP", "html_url": "https://rseng.github.io/software/repository/github/BoPeng/simuPOP", "api_url": "https://rseng.github.io/software/api/repos/github/BoPeng/simuPOP"}, {"uid": "github/AdriaJ/polyclean", "html_url": "https://rseng.github.io/software/repository/github/AdriaJ/polyclean", "api_url": "https://rseng.github.io/software/api/repos/github/AdriaJ/polyclean"}, {"uid": "github/DariaGangardt/pAGN", "html_url": "https://rseng.github.io/software/repository/github/DariaGangardt/pAGN", "api_url": "https://rseng.github.io/software/api/repos/github/DariaGangardt/pAGN"}, {"uid": "github/raspishake/rsudp", "html_url": "https://rseng.github.io/software/repository/github/raspishake/rsudp", "api_url": "https://rseng.github.io/software/api/repos/github/raspishake/rsudp"}, {"uid": "github/mtholder/ncl", "html_url": "https://rseng.github.io/software/repository/github/mtholder/ncl", "api_url": "https://rseng.github.io/software/api/repos/github/mtholder/ncl"}, {"uid": "github/adamjermyn/Skye", "html_url": "https://rseng.github.io/software/repository/github/adamjermyn/Skye", "api_url": "https://rseng.github.io/software/api/repos/github/adamjermyn/Skye"}, {"uid": "github/nhhaidee/WaveSeekerNet", "html_url": "https://rseng.github.io/software/repository/github/nhhaidee/WaveSeekerNet", "api_url": "https://rseng.github.io/software/api/repos/github/nhhaidee/WaveSeekerNet"}, {"uid": "github/ABM4ALL/Melodie", "html_url": "https://rseng.github.io/software/repository/github/ABM4ALL/Melodie", "api_url": "https://rseng.github.io/software/api/repos/github/ABM4ALL/Melodie"}, {"uid": "github/zqfang/gseapy", "html_url": "https://rseng.github.io/software/repository/github/zqfang/gseapy", "api_url": "https://rseng.github.io/software/api/repos/github/zqfang/gseapy"}, {"uid": "github/johnlee4/CoCoCoNet", "html_url": "https://rseng.github.io/software/repository/github/johnlee4/CoCoCoNet", "api_url": "https://rseng.github.io/software/api/repos/github/johnlee4/CoCoCoNet"}, {"uid": "github/NETL-RIC/URC-Assessment-Method", "html_url": "https://rseng.github.io/software/repository/github/NETL-RIC/URC-Assessment-Method", "api_url": "https://rseng.github.io/software/api/repos/github/NETL-RIC/URC-Assessment-Method"}, {"uid": "github/jeancmaia/mcglm", "html_url": "https://rseng.github.io/software/repository/github/jeancmaia/mcglm", "api_url": "https://rseng.github.io/software/api/repos/github/jeancmaia/mcglm"}, {"uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TransitionsInTimeseries.jl"}, {"uid": "github/JuliaDynamics/DrWatson.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/DrWatson.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/DrWatson.jl"}, {"uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TimeseriesSurrogates.jl"}, {"uid": "github/MatthijsHak/MetalDock", "html_url": "https://rseng.github.io/software/repository/github/MatthijsHak/MetalDock", "api_url": "https://rseng.github.io/software/api/repos/github/MatthijsHak/MetalDock"}, {"uid": "github/sustainableaviation/jetfuelburn", "html_url": "https://rseng.github.io/software/repository/github/sustainableaviation/jetfuelburn", "api_url": "https://rseng.github.io/software/api/repos/github/sustainableaviation/jetfuelburn"}, {"uid": "github/yhoogstrate/fastafs", "html_url": "https://rseng.github.io/software/repository/github/yhoogstrate/fastafs", "api_url": "https://rseng.github.io/software/api/repos/github/yhoogstrate/fastafs"}, {"uid": "github/vidakris/flatwrm", "html_url": "https://rseng.github.io/software/repository/github/vidakris/flatwrm", "api_url": "https://rseng.github.io/software/api/repos/github/vidakris/flatwrm"}, {"uid": "github/solislemuslab/minaa", "html_url": "https://rseng.github.io/software/repository/github/solislemuslab/minaa", "api_url": "https://rseng.github.io/software/api/repos/github/solislemuslab/minaa"}, {"uid": "github/genouest/biomaj-cli", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-cli"}, {"uid": "github/genouest/biomaj-daemon", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-daemon", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-daemon"}, {"uid": "github/lasseignelab/CINmetrics", "html_url": "https://rseng.github.io/software/repository/github/lasseignelab/CINmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/lasseignelab/CINmetrics"}, {"uid": "github/deepmind/alphafold", "html_url": "https://rseng.github.io/software/repository/github/deepmind/alphafold", "api_url": "https://rseng.github.io/software/api/repos/github/deepmind/alphafold"}, {"uid": "github/askap-craco/CELEBI", "html_url": "https://rseng.github.io/software/repository/github/askap-craco/CELEBI", "api_url": "https://rseng.github.io/software/api/repos/github/askap-craco/CELEBI"}, {"uid": "github/PopGenClustering/Clumppling", "html_url": "https://rseng.github.io/software/repository/github/PopGenClustering/Clumppling", "api_url": "https://rseng.github.io/software/api/repos/github/PopGenClustering/Clumppling"}, {"uid": "github/alvinxhan/Phydelity", "html_url": "https://rseng.github.io/software/repository/github/alvinxhan/Phydelity", "api_url": "https://rseng.github.io/software/api/repos/github/alvinxhan/Phydelity"}, {"uid": "github/juanaldayparejo/archnemesis-dist", "html_url": "https://rseng.github.io/software/repository/github/juanaldayparejo/archnemesis-dist", "api_url": "https://rseng.github.io/software/api/repos/github/juanaldayparejo/archnemesis-dist"}, {"uid": "github/BPSB/combine-p-values-discrete", "html_url": "https://rseng.github.io/software/repository/github/BPSB/combine-p-values-discrete", "api_url": "https://rseng.github.io/software/api/repos/github/BPSB/combine-p-values-discrete"}, {"uid": "github/dgbowl/yadg", "html_url": "https://rseng.github.io/software/repository/github/dgbowl/yadg", "api_url": "https://rseng.github.io/software/api/repos/github/dgbowl/yadg"}, {"uid": "github/BioinfoUNIBA/REDItools2", "html_url": "https://rseng.github.io/software/repository/github/BioinfoUNIBA/REDItools2", "api_url": "https://rseng.github.io/software/api/repos/github/BioinfoUNIBA/REDItools2"}, {"uid": "github/bedops/bedops", "html_url": "https://rseng.github.io/software/repository/github/bedops/bedops", "api_url": "https://rseng.github.io/software/api/repos/github/bedops/bedops"}, {"uid": "github/hydrosolutions/riversCentralAsia", "html_url": "https://rseng.github.io/software/repository/github/hydrosolutions/riversCentralAsia", "api_url": "https://rseng.github.io/software/api/repos/github/hydrosolutions/riversCentralAsia"}, {"uid": "github/jupyterlab/jupyterlab", "html_url": "https://rseng.github.io/software/repository/github/jupyterlab/jupyterlab", "api_url": "https://rseng.github.io/software/api/repos/github/jupyterlab/jupyterlab"}, {"uid": "github/casaluca/bolometric-corrections", "html_url": "https://rseng.github.io/software/repository/github/casaluca/bolometric-corrections", "api_url": "https://rseng.github.io/software/api/repos/github/casaluca/bolometric-corrections"}, {"uid": "github/hungyipu/Odyssey", "html_url": "https://rseng.github.io/software/repository/github/hungyipu/Odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/hungyipu/Odyssey"}, {"uid": "github/niemasd/CoaTran", "html_url": "https://rseng.github.io/software/repository/github/niemasd/CoaTran", "api_url": "https://rseng.github.io/software/api/repos/github/niemasd/CoaTran"}, {"uid": "github/CSi-Studio/G-Aligner", "html_url": "https://rseng.github.io/software/repository/github/CSi-Studio/G-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/CSi-Studio/G-Aligner"}, {"uid": "github/computational-chemical-biology/ChemWalker", "html_url": "https://rseng.github.io/software/repository/github/computational-chemical-biology/ChemWalker", "api_url": "https://rseng.github.io/software/api/repos/github/computational-chemical-biology/ChemWalker"}, {"uid": "github/damonge/CRIME", "html_url": "https://rseng.github.io/software/repository/github/damonge/CRIME", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CRIME"}, {"uid": "github/damonge/CoLoRe", "html_url": "https://rseng.github.io/software/repository/github/damonge/CoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CoLoRe"}, {"uid": "github/damonge/CUTE", "html_url": "https://rseng.github.io/software/repository/github/damonge/CUTE", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CUTE"}, {"uid": "github/damonge/schNell", "html_url": "https://rseng.github.io/software/repository/github/damonge/schNell", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/schNell"}, {"uid": "github/sauddy/GRINN", "html_url": "https://rseng.github.io/software/repository/github/sauddy/GRINN", "api_url": "https://rseng.github.io/software/api/repos/github/sauddy/GRINN"}, {"uid": "github/oschwengers/platon", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/platon", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/platon"}, {"uid": "github/oschwengers/referenceseeker", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/referenceseeker", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/referenceseeker"}, {"uid": "github/oschwengers/bakta", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/bakta", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/bakta"}, {"uid": "github/skschum/MFAssignR", "html_url": "https://rseng.github.io/software/repository/github/skschum/MFAssignR", "api_url": "https://rseng.github.io/software/api/repos/github/skschum/MFAssignR"}, {"uid": "github/MilesCranmer/PySR", "html_url": "https://rseng.github.io/software/repository/github/MilesCranmer/PySR", "api_url": "https://rseng.github.io/software/api/repos/github/MilesCranmer/PySR"}, {"uid": "github/matteozennaro/reps", "html_url": "https://rseng.github.io/software/repository/github/matteozennaro/reps", "api_url": "https://rseng.github.io/software/api/repos/github/matteozennaro/reps"}, {"uid": "github/ScialdoneLab/MitoHEAR", "html_url": "https://rseng.github.io/software/repository/github/ScialdoneLab/MitoHEAR", "api_url": "https://rseng.github.io/software/api/repos/github/ScialdoneLab/MitoHEAR"}, {"uid": "github/twinl/website", "html_url": "https://rseng.github.io/software/repository/github/twinl/website", "api_url": "https://rseng.github.io/software/api/repos/github/twinl/website"}, {"uid": "github/bethgelab/foolbox", "html_url": "https://rseng.github.io/software/repository/github/bethgelab/foolbox", "api_url": "https://rseng.github.io/software/api/repos/github/bethgelab/foolbox"}, {"uid": "github/UCL/rmcmc", "html_url": "https://rseng.github.io/software/repository/github/UCL/rmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/UCL/rmcmc"}, {"uid": "github/VU-IVM/VineCopulas", "html_url": "https://rseng.github.io/software/repository/github/VU-IVM/VineCopulas", "api_url": "https://rseng.github.io/software/api/repos/github/VU-IVM/VineCopulas"}, {"uid": "github/UK-Digital-Heart-Project/4Dsurvival", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsurvival"}, {"uid": "github/UK-Digital-Heart-Project/4Dsegment", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsegment", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsegment"}, {"uid": "github/bootphon/phonemizer", "html_url": "https://rseng.github.io/software/repository/github/bootphon/phonemizer", "api_url": "https://rseng.github.io/software/api/repos/github/bootphon/phonemizer"}, {"uid": "github/BonsonW/slow5curl", "html_url": "https://rseng.github.io/software/repository/github/BonsonW/slow5curl", "api_url": "https://rseng.github.io/software/api/repos/github/BonsonW/slow5curl"}, {"uid": "github/bwkeller/PASTA", "html_url": "https://rseng.github.io/software/repository/github/bwkeller/PASTA", "api_url": "https://rseng.github.io/software/api/repos/github/bwkeller/PASTA"}, {"uid": "github/astroCV/astroCV", "html_url": "https://rseng.github.io/software/repository/github/astroCV/astroCV", "api_url": "https://rseng.github.io/software/api/repos/github/astroCV/astroCV"}, {"uid": "github/ptriska/WavesDash", "html_url": "https://rseng.github.io/software/repository/github/ptriska/WavesDash", "api_url": "https://rseng.github.io/software/api/repos/github/ptriska/WavesDash"}, {"uid": "github/AMICI-dev/AMICI", "html_url": "https://rseng.github.io/software/repository/github/AMICI-dev/AMICI", "api_url": "https://rseng.github.io/software/api/repos/github/AMICI-dev/AMICI"}, {"uid": "github/cadet/CADET-Core", "html_url": "https://rseng.github.io/software/repository/github/cadet/CADET-Core", "api_url": "https://rseng.github.io/software/api/repos/github/cadet/CADET-Core"}, {"uid": "github/open-aviation/tangram", "html_url": "https://rseng.github.io/software/repository/github/open-aviation/tangram", "api_url": "https://rseng.github.io/software/api/repos/github/open-aviation/tangram"}, {"uid": "github/CSSEGISandData/COVID-19", "html_url": "https://rseng.github.io/software/repository/github/CSSEGISandData/COVID-19", "api_url": "https://rseng.github.io/software/api/repos/github/CSSEGISandData/COVID-19"}, {"uid": "github/siara-cc/Unishox2", "html_url": "https://rseng.github.io/software/repository/github/siara-cc/Unishox2", "api_url": "https://rseng.github.io/software/api/repos/github/siara-cc/Unishox2"}, {"uid": "github/Lyalpha/spalipy", "html_url": "https://rseng.github.io/software/repository/github/Lyalpha/spalipy", "api_url": "https://rseng.github.io/software/api/repos/github/Lyalpha/spalipy"}, {"uid": "github/simple-crypto/SCALib", "html_url": "https://rseng.github.io/software/repository/github/simple-crypto/SCALib", "api_url": "https://rseng.github.io/software/api/repos/github/simple-crypto/SCALib"}, {"uid": "github/uw-comphys/openccm", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/openccm", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/openccm"}, {"uid": "github/uw-comphys/shapelets", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/shapelets", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/shapelets"}, {"uid": "github/uw-comphys/opencmp", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/opencmp", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/opencmp"}, {"uid": "github/changliao1025/pyflowline", "html_url": "https://rseng.github.io/software/repository/github/changliao1025/pyflowline", "api_url": "https://rseng.github.io/software/api/repos/github/changliao1025/pyflowline"}, {"uid": "github/lisadang27/SPCA", "html_url": "https://rseng.github.io/software/repository/github/lisadang27/SPCA", "api_url": "https://rseng.github.io/software/api/repos/github/lisadang27/SPCA"}, {"uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "html_url": "https://rseng.github.io/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "api_url": "https://rseng.github.io/software/api/repos/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-"}, {"uid": "github/cosmo-epfl/chemiscope", "html_url": "https://rseng.github.io/software/repository/github/cosmo-epfl/chemiscope", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-epfl/chemiscope"}, {"uid": "github/hdeeg/KvW", "html_url": "https://rseng.github.io/software/repository/github/hdeeg/KvW", "api_url": "https://rseng.github.io/software/api/repos/github/hdeeg/KvW"}, {"uid": "github/AWehrhahn/SME", "html_url": "https://rseng.github.io/software/repository/github/AWehrhahn/SME", "api_url": "https://rseng.github.io/software/api/repos/github/AWehrhahn/SME"}, {"uid": "github/sing-group/seda", "html_url": "https://rseng.github.io/software/repository/github/sing-group/seda", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/seda"}, {"uid": "github/sing-group/my-brain-seq", "html_url": "https://rseng.github.io/software/repository/github/sing-group/my-brain-seq", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/my-brain-seq"}, {"uid": "github/goualard-f/MicroFloatingPoints.jl", "html_url": "https://rseng.github.io/software/repository/github/goualard-f/MicroFloatingPoints.jl", "api_url": "https://rseng.github.io/software/api/repos/github/goualard-f/MicroFloatingPoints.jl"}, {"uid": "github/gacou54/pyorthanc", "html_url": "https://rseng.github.io/software/repository/github/gacou54/pyorthanc", "api_url": "https://rseng.github.io/software/api/repos/github/gacou54/pyorthanc"}, {"uid": "github/vsulis5357/Sonification", "html_url": "https://rseng.github.io/software/repository/github/vsulis5357/Sonification", "api_url": "https://rseng.github.io/software/api/repos/github/vsulis5357/Sonification"}, {"uid": "github/mariapetro/LeHaMoC", "html_url": "https://rseng.github.io/software/repository/github/mariapetro/LeHaMoC", "api_url": "https://rseng.github.io/software/api/repos/github/mariapetro/LeHaMoC"}, {"uid": "github/wustat/rjaf", "html_url": "https://rseng.github.io/software/repository/github/wustat/rjaf", "api_url": "https://rseng.github.io/software/api/repos/github/wustat/rjaf"}, {"uid": "github/khowe/quicktree", "html_url": "https://rseng.github.io/software/repository/github/khowe/quicktree", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quicktree"}, {"uid": "github/khowe/quick", "html_url": "https://rseng.github.io/software/repository/github/khowe/quick", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quick"}, {"uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", "html_url": "https://rseng.github.io/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", "api_url": "https://rseng.github.io/software/api/repos/github/mengyao/Complete-Striped-Smith-Waterman-Library"}, {"uid": "github/kavonrtep/dante", "html_url": "https://rseng.github.io/software/repository/github/kavonrtep/dante", "api_url": "https://rseng.github.io/software/api/repos/github/kavonrtep/dante"}, {"uid": "github/cgobat/asymmetric_uncertainty", "html_url": "https://rseng.github.io/software/repository/github/cgobat/asymmetric_uncertainty", "api_url": "https://rseng.github.io/software/api/repos/github/cgobat/asymmetric_uncertainty"}, {"uid": "github/juliotux/astropop", "html_url": "https://rseng.github.io/software/repository/github/juliotux/astropop", "api_url": "https://rseng.github.io/software/api/repos/github/juliotux/astropop"}, {"uid": "github/COINtoolbox/CosmoPhotoz", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/CosmoPhotoz", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/CosmoPhotoz"}, {"uid": "github/COINtoolbox/ActSNClass", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/ActSNClass", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/ActSNClass"}, {"uid": "github/COINtoolbox/DRACULA", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/DRACULA", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/DRACULA"}, {"uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", "html_url": "https://rseng.github.io/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", "api_url": "https://rseng.github.io/software/api/repos/github/semiautomaticgit/SemiAutomaticClassificationPlugin"}, {"uid": "github/mggg/ecological-inference", "html_url": "https://rseng.github.io/software/repository/github/mggg/ecological-inference", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/ecological-inference"}, {"uid": "github/mggg/votekit", "html_url": "https://rseng.github.io/software/repository/github/mggg/votekit", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/votekit"}, {"uid": "github/musevlt/muse-psfr", "html_url": "https://rseng.github.io/software/repository/github/musevlt/muse-psfr", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/muse-psfr"}, {"uid": "github/musevlt/origin", "html_url": "https://rseng.github.io/software/repository/github/musevlt/origin", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/origin"}, {"uid": "github/mjoppich/bioGUItools", "html_url": "https://rseng.github.io/software/repository/github/mjoppich/bioGUItools", "api_url": "https://rseng.github.io/software/api/repos/github/mjoppich/bioGUItools"}, {"uid": "github/GalacticDynamics/unxt", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics/unxt", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics/unxt"}, {"uid": "github/Qile0317/APackOfTheClones", "html_url": "https://rseng.github.io/software/repository/github/Qile0317/APackOfTheClones", "api_url": "https://rseng.github.io/software/api/repos/github/Qile0317/APackOfTheClones"}, {"uid": "github/hippalectryon-0/pyloggrid", "html_url": "https://rseng.github.io/software/repository/github/hippalectryon-0/pyloggrid", "api_url": "https://rseng.github.io/software/api/repos/github/hippalectryon-0/pyloggrid"}, {"uid": "github/fastpm/fastpm", "html_url": "https://rseng.github.io/software/repository/github/fastpm/fastpm", "api_url": "https://rseng.github.io/software/api/repos/github/fastpm/fastpm"}, {"uid": "github/N-Wouda/ALNS", "html_url": "https://rseng.github.io/software/repository/github/N-Wouda/ALNS", "api_url": "https://rseng.github.io/software/api/repos/github/N-Wouda/ALNS"}, {"uid": "github/julianreul/mode_behave", "html_url": "https://rseng.github.io/software/repository/github/julianreul/mode_behave", "api_url": "https://rseng.github.io/software/api/repos/github/julianreul/mode_behave"}, {"uid": "github/biocircuits/bioscrape", "html_url": "https://rseng.github.io/software/repository/github/biocircuits/bioscrape", "api_url": "https://rseng.github.io/software/api/repos/github/biocircuits/bioscrape"}, {"uid": "github/dzerbino/velvet", "html_url": "https://rseng.github.io/software/repository/github/dzerbino/velvet", "api_url": "https://rseng.github.io/software/api/repos/github/dzerbino/velvet"}, {"uid": "github/Zilong-Li/PCAone", "html_url": "https://rseng.github.io/software/repository/github/Zilong-Li/PCAone", "api_url": "https://rseng.github.io/software/api/repos/github/Zilong-Li/PCAone"}, {"uid": "github/rainwoodman/kdcount", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/kdcount", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/kdcount"}, {"uid": "github/rainwoodman/bigfile", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/bigfile"}, {"uid": "github/EMResearch/EvoMaster", "html_url": "https://rseng.github.io/software/repository/github/EMResearch/EvoMaster", "api_url": "https://rseng.github.io/software/api/repos/github/EMResearch/EvoMaster"}, {"uid": "github/sebastian-zieba/PACMAN", "html_url": "https://rseng.github.io/software/repository/github/sebastian-zieba/PACMAN", "api_url": "https://rseng.github.io/software/api/repos/github/sebastian-zieba/PACMAN"}, {"uid": "github/mneeleman/qubefit", "html_url": "https://rseng.github.io/software/repository/github/mneeleman/qubefit", "api_url": "https://rseng.github.io/software/api/repos/github/mneeleman/qubefit"}, {"uid": "github/Blosc/c-blosc", "html_url": "https://rseng.github.io/software/repository/github/Blosc/c-blosc", "api_url": "https://rseng.github.io/software/api/repos/github/Blosc/c-blosc"}, {"uid": "github/ppsp-team/PyNM", "html_url": "https://rseng.github.io/software/repository/github/ppsp-team/PyNM", "api_url": "https://rseng.github.io/software/api/repos/github/ppsp-team/PyNM"}, {"uid": "github/PaulRitsche/DLTrack", "html_url": "https://rseng.github.io/software/repository/github/PaulRitsche/DLTrack", "api_url": "https://rseng.github.io/software/api/repos/github/PaulRitsche/DLTrack"}, {"uid": "github/szpiech/selscan", "html_url": "https://rseng.github.io/software/repository/github/szpiech/selscan", "api_url": "https://rseng.github.io/software/api/repos/github/szpiech/selscan"}, {"uid": "github/BayraktarLab/cell2location", "html_url": "https://rseng.github.io/software/repository/github/BayraktarLab/cell2location", "api_url": "https://rseng.github.io/software/api/repos/github/BayraktarLab/cell2location"}, {"uid": "github/BoevaLab/FREEC", "html_url": "https://rseng.github.io/software/repository/github/BoevaLab/FREEC", "api_url": "https://rseng.github.io/software/api/repos/github/BoevaLab/FREEC"}, {"uid": "github/anderslogg/geco", "html_url": "https://rseng.github.io/software/repository/github/anderslogg/geco", "api_url": "https://rseng.github.io/software/api/repos/github/anderslogg/geco"}, {"uid": "github/PGB-LIV/MHCVision", "html_url": "https://rseng.github.io/software/repository/github/PGB-LIV/MHCVision", "api_url": "https://rseng.github.io/software/api/repos/github/PGB-LIV/MHCVision"}, {"uid": "github/OSeMOSYS/otoole", "html_url": "https://rseng.github.io/software/repository/github/OSeMOSYS/otoole", "api_url": "https://rseng.github.io/software/api/repos/github/OSeMOSYS/otoole"}, {"uid": "github/dirac-institute/asterogap", "html_url": "https://rseng.github.io/software/repository/github/dirac-institute/asterogap", "api_url": "https://rseng.github.io/software/api/repos/github/dirac-institute/asterogap"}, {"uid": "github/PhysiBoSS/PhysiBoSS", "html_url": "https://rseng.github.io/software/repository/github/PhysiBoSS/PhysiBoSS", "api_url": "https://rseng.github.io/software/api/repos/github/PhysiBoSS/PhysiBoSS"}, {"uid": "github/jstjohn/SeqPrep", "html_url": "https://rseng.github.io/software/repository/github/jstjohn/SeqPrep", "api_url": "https://rseng.github.io/software/api/repos/github/jstjohn/SeqPrep"}, {"uid": "github/cjcollin37/IsoFATE", "html_url": "https://rseng.github.io/software/repository/github/cjcollin37/IsoFATE", "api_url": "https://rseng.github.io/software/api/repos/github/cjcollin37/IsoFATE"}, {"uid": "github/utpal-singh/SAnTex", "html_url": "https://rseng.github.io/software/repository/github/utpal-singh/SAnTex", "api_url": "https://rseng.github.io/software/api/repos/github/utpal-singh/SAnTex"}, {"uid": "github/ScionResearch/genomesizeR", "html_url": "https://rseng.github.io/software/repository/github/ScionResearch/genomesizeR", "api_url": "https://rseng.github.io/software/api/repos/github/ScionResearch/genomesizeR"}, {"uid": "github/barnesgroupICL/Driftfusion", "html_url": "https://rseng.github.io/software/repository/github/barnesgroupICL/Driftfusion", "api_url": "https://rseng.github.io/software/api/repos/github/barnesgroupICL/Driftfusion"}, {"uid": "github/moscibrodzka/ipole", "html_url": "https://rseng.github.io/software/repository/github/moscibrodzka/ipole", "api_url": "https://rseng.github.io/software/api/repos/github/moscibrodzka/ipole"}, {"uid": "github/KiranLDA/PAMLr", "html_url": "https://rseng.github.io/software/repository/github/KiranLDA/PAMLr", "api_url": "https://rseng.github.io/software/api/repos/github/KiranLDA/PAMLr"}, {"uid": "github/lgbouma/gyro-interp", "html_url": "https://rseng.github.io/software/repository/github/lgbouma/gyro-interp", "api_url": "https://rseng.github.io/software/api/repos/github/lgbouma/gyro-interp"}, {"uid": "github/CobayaSampler/cobaya", "html_url": "https://rseng.github.io/software/repository/github/CobayaSampler/cobaya", "api_url": "https://rseng.github.io/software/api/repos/github/CobayaSampler/cobaya"}, {"uid": "github/AStcherbinine/omegapy", "html_url": "https://rseng.github.io/software/repository/github/AStcherbinine/omegapy", "api_url": "https://rseng.github.io/software/api/repos/github/AStcherbinine/omegapy"}, {"uid": "github/jgoodeve/streaktools", "html_url": "https://rseng.github.io/software/repository/github/jgoodeve/streaktools", "api_url": "https://rseng.github.io/software/api/repos/github/jgoodeve/streaktools"}, {"uid": "github/bloch-labs/bloch", "html_url": "https://rseng.github.io/software/repository/github/bloch-labs/bloch", "api_url": "https://rseng.github.io/software/api/repos/github/bloch-labs/bloch"}, {"uid": "github/MIT-STARLab/deconfuser", "html_url": "https://rseng.github.io/software/repository/github/MIT-STARLab/deconfuser", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-STARLab/deconfuser"}, {"uid": "github/mzy2240/ESA", "html_url": "https://rseng.github.io/software/repository/github/mzy2240/ESA", "api_url": "https://rseng.github.io/software/api/repos/github/mzy2240/ESA"}, {"uid": "github/Parsoa/SVDSS", "html_url": "https://rseng.github.io/software/repository/github/Parsoa/SVDSS", "api_url": "https://rseng.github.io/software/api/repos/github/Parsoa/SVDSS"}, {"uid": "github/ahwkuepper/mcluster", "html_url": "https://rseng.github.io/software/repository/github/ahwkuepper/mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/ahwkuepper/mcluster"}, {"uid": "github/mivp/encube", "html_url": "https://rseng.github.io/software/repository/github/mivp/encube", "api_url": "https://rseng.github.io/software/api/repos/github/mivp/encube"}, {"uid": "github/neeravkaushal/RIDs-in-WCDs", "html_url": "https://rseng.github.io/software/repository/github/neeravkaushal/RIDs-in-WCDs", "api_url": "https://rseng.github.io/software/api/repos/github/neeravkaushal/RIDs-in-WCDs"}, {"uid": "github/HillLab/SomaticSiMu", "html_url": "https://rseng.github.io/software/repository/github/HillLab/SomaticSiMu", "api_url": "https://rseng.github.io/software/api/repos/github/HillLab/SomaticSiMu"}, {"uid": "github/Onogi/VIGoR", "html_url": "https://rseng.github.io/software/repository/github/Onogi/VIGoR", "api_url": "https://rseng.github.io/software/api/repos/github/Onogi/VIGoR"}, {"uid": "github/NeotomaDB/neotoma2", "html_url": "https://rseng.github.io/software/repository/github/NeotomaDB/neotoma2", "api_url": "https://rseng.github.io/software/api/repos/github/NeotomaDB/neotoma2"}, {"uid": "github/Kennicutt/SAUSERO", "html_url": "https://rseng.github.io/software/repository/github/Kennicutt/SAUSERO", "api_url": "https://rseng.github.io/software/api/repos/github/Kennicutt/SAUSERO"}, {"uid": "github/FEniCS/basix", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/basix", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/basix"}, {"uid": "github/FEniCS/ffcx", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/ffcx", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/ffcx"}, {"uid": "github/GreycLab/gmic", "html_url": "https://rseng.github.io/software/repository/github/GreycLab/gmic", "api_url": "https://rseng.github.io/software/api/repos/github/GreycLab/gmic"}, {"uid": "github/expressionanalysis/ea-utils", "html_url": "https://rseng.github.io/software/repository/github/expressionanalysis/ea-utils", "api_url": "https://rseng.github.io/software/api/repos/github/expressionanalysis/ea-utils"}, {"uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "html_url": "https://rseng.github.io/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "api_url": "https://rseng.github.io/software/api/repos/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs"}, {"uid": "github/simoncasassus/ConeRot", "html_url": "https://rseng.github.io/software/repository/github/simoncasassus/ConeRot", "api_url": "https://rseng.github.io/software/api/repos/github/simoncasassus/ConeRot"}, {"uid": "github/mirochaj/ares", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/ares", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/ares"}, {"uid": "github/mirochaj/sedop", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/sedop", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/sedop"}, {"uid": "github/FlorianThibord/OptimiR", "html_url": "https://rseng.github.io/software/repository/github/FlorianThibord/OptimiR", "api_url": "https://rseng.github.io/software/api/repos/github/FlorianThibord/OptimiR"}, {"uid": "github/sibirrer/psfr", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/psfr", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/psfr"}, {"uid": "github/sibirrer/lenstronomy", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/lenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/lenstronomy"}, {"uid": "github/sibirrer/hierArc", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/hierArc", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/hierArc"}, {"uid": "github/mgcooper/baseflow", "html_url": "https://rseng.github.io/software/repository/github/mgcooper/baseflow", "api_url": "https://rseng.github.io/software/api/repos/github/mgcooper/baseflow"}, {"uid": "github/potassco/clingo", "html_url": "https://rseng.github.io/software/repository/github/potassco/clingo", "api_url": "https://rseng.github.io/software/api/repos/github/potassco/clingo"}, {"uid": "github/Ecogenomics/GTDBTk", "html_url": "https://rseng.github.io/software/repository/github/Ecogenomics/GTDBTk", "api_url": "https://rseng.github.io/software/api/repos/github/Ecogenomics/GTDBTk"}, {"uid": "github/gmorras/pyEFPE", "html_url": "https://rseng.github.io/software/repository/github/gmorras/pyEFPE", "api_url": "https://rseng.github.io/software/api/repos/github/gmorras/pyEFPE"}, {"uid": "github/JonasRieger/ldaPrototype", "html_url": "https://rseng.github.io/software/repository/github/JonasRieger/ldaPrototype", "api_url": "https://rseng.github.io/software/api/repos/github/JonasRieger/ldaPrototype"}, {"uid": "github/NOSALRO/robot_dart", "html_url": "https://rseng.github.io/software/repository/github/NOSALRO/robot_dart", "api_url": "https://rseng.github.io/software/api/repos/github/NOSALRO/robot_dart"}, {"uid": "github/biomed-AI/GraphBepi", "html_url": "https://rseng.github.io/software/repository/github/biomed-AI/GraphBepi", "api_url": "https://rseng.github.io/software/api/repos/github/biomed-AI/GraphBepi"}, {"uid": "github/rinikerlab/Ensembler", "html_url": "https://rseng.github.io/software/repository/github/rinikerlab/Ensembler", "api_url": "https://rseng.github.io/software/api/repos/github/rinikerlab/Ensembler"}, {"uid": "github/mpound/pdrtpy", "html_url": "https://rseng.github.io/software/repository/github/mpound/pdrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/pdrtpy"}, {"uid": "github/mpound/comb", "html_url": "https://rseng.github.io/software/repository/github/mpound/comb", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/comb"}, {"uid": "github/elwinter/nnde", "html_url": "https://rseng.github.io/software/repository/github/elwinter/nnde", "api_url": "https://rseng.github.io/software/api/repos/github/elwinter/nnde"}, {"uid": "github/CMU-SAFARI/BLEND", "html_url": "https://rseng.github.io/software/repository/github/CMU-SAFARI/BLEND", "api_url": "https://rseng.github.io/software/api/repos/github/CMU-SAFARI/BLEND"}, {"uid": "github/VirtualPlanetaryLaboratory/atmos", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/atmos", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/atmos"}, {"uid": "github/VirtualPlanetaryLaboratory/vplanet", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/vplanet", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/vplanet"}, {"uid": "github/mthorrell/gbnet", "html_url": "https://rseng.github.io/software/repository/github/mthorrell/gbnet", "api_url": "https://rseng.github.io/software/api/repos/github/mthorrell/gbnet"}, {"uid": "github/FCS-analysis/multipletau", "html_url": "https://rseng.github.io/software/repository/github/FCS-analysis/multipletau", "api_url": "https://rseng.github.io/software/api/repos/github/FCS-analysis/multipletau"}, {"uid": "github/ropenscilabs/allcontributors", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/allcontributors", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/allcontributors"}, {"uid": "github/ropenscilabs/r2readthedocs", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/r2readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/r2readthedocs"}, {"uid": "github/ropenscilabs/gendercoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/gendercoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/gendercoder"}, {"uid": "github/ropenscilabs/qcoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/qcoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/qcoder"}, {"uid": "github/dellytools/sansa", "html_url": "https://rseng.github.io/software/repository/github/dellytools/sansa", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/sansa"}, {"uid": "github/dellytools/delly", "html_url": "https://rseng.github.io/software/repository/github/dellytools/delly", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/delly"}, {"uid": "github/josegcpa/nnunet_serve", "html_url": "https://rseng.github.io/software/repository/github/josegcpa/nnunet_serve", "api_url": "https://rseng.github.io/software/api/repos/github/josegcpa/nnunet_serve"}, {"uid": "github/mendezVKI/MODULO", "html_url": "https://rseng.github.io/software/repository/github/mendezVKI/MODULO", "api_url": "https://rseng.github.io/software/api/repos/github/mendezVKI/MODULO"}, {"uid": "github/fgbuster/fgbuster", "html_url": "https://rseng.github.io/software/repository/github/fgbuster/fgbuster", "api_url": "https://rseng.github.io/software/api/repos/github/fgbuster/fgbuster"}, {"uid": "github/wm75/vaporup", "html_url": "https://rseng.github.io/software/repository/github/wm75/vaporup", "api_url": "https://rseng.github.io/software/api/repos/github/wm75/vaporup"}, {"uid": "github/MDAnalysis/mdanalysis", "html_url": "https://rseng.github.io/software/repository/github/MDAnalysis/mdanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/MDAnalysis/mdanalysis"}, {"uid": "github/garrelt/C2-Ray3Dm1D_Helium", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray3Dm1D_Helium"}, {"uid": "github/garrelt/C2-Ray1D", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray1D", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray1D"}, {"uid": "github/dcjones/quip", "html_url": "https://rseng.github.io/software/repository/github/dcjones/quip", "api_url": "https://rseng.github.io/software/api/repos/github/dcjones/quip"}, {"uid": "github/LDEO-CREW/Pythonic-DISORT", "html_url": "https://rseng.github.io/software/repository/github/LDEO-CREW/Pythonic-DISORT", "api_url": "https://rseng.github.io/software/api/repos/github/LDEO-CREW/Pythonic-DISORT"}, {"uid": "github/KarrLab/de_sim", "html_url": "https://rseng.github.io/software/repository/github/KarrLab/de_sim", "api_url": "https://rseng.github.io/software/api/repos/github/KarrLab/de_sim"}, {"uid": "github/toshiyan/cmblensplus", "html_url": "https://rseng.github.io/software/repository/github/toshiyan/cmblensplus", "api_url": "https://rseng.github.io/software/api/repos/github/toshiyan/cmblensplus"}, {"uid": "github/cagrikymk/JAX-ReaxFF", "html_url": "https://rseng.github.io/software/repository/github/cagrikymk/JAX-ReaxFF", "api_url": "https://rseng.github.io/software/api/repos/github/cagrikymk/JAX-ReaxFF"}, {"uid": "github/qianlivan/RPPPS", "html_url": "https://rseng.github.io/software/repository/github/qianlivan/RPPPS", "api_url": "https://rseng.github.io/software/api/repos/github/qianlivan/RPPPS"}, {"uid": "github/patrickwest/EukRep", "html_url": "https://rseng.github.io/software/repository/github/patrickwest/EukRep", "api_url": "https://rseng.github.io/software/api/repos/github/patrickwest/EukRep"}, {"uid": "github/lucatelli/morphen", "html_url": "https://rseng.github.io/software/repository/github/lucatelli/morphen", "api_url": "https://rseng.github.io/software/api/repos/github/lucatelli/morphen"}, {"uid": "github/ziotom78/libpolycomp", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/libpolycomp", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/libpolycomp"}, {"uid": "github/ziotom78/Healpix.jl", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/Healpix.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/Healpix.jl"}, {"uid": "github/ziotom78/dacapo_calibration", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/dacapo_calibration", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/dacapo_calibration"}, {"uid": "github/pynucastro/pynucastro", "html_url": "https://rseng.github.io/software/repository/github/pynucastro/pynucastro", "api_url": "https://rseng.github.io/software/api/repos/github/pynucastro/pynucastro"}, {"uid": "github/fmichel/MaDKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/MaDKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/MaDKit"}, {"uid": "github/fmichel/TurtleKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/TurtleKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/TurtleKit"}, {"uid": "github/SebastianBocquet/pygtc", "html_url": "https://rseng.github.io/software/repository/github/SebastianBocquet/pygtc", "api_url": "https://rseng.github.io/software/api/repos/github/SebastianBocquet/pygtc"}, {"uid": "github/bluefoxr/COINr", "html_url": "https://rseng.github.io/software/repository/github/bluefoxr/COINr", "api_url": "https://rseng.github.io/software/api/repos/github/bluefoxr/COINr"}, {"uid": "github/putonti/virmine", "html_url": "https://rseng.github.io/software/repository/github/putonti/virmine", "api_url": "https://rseng.github.io/software/api/repos/github/putonti/virmine"}, {"uid": "github/seahorce-scidac/REMORA", "html_url": "https://rseng.github.io/software/repository/github/seahorce-scidac/REMORA", "api_url": "https://rseng.github.io/software/api/repos/github/seahorce-scidac/REMORA"}, {"uid": "github/rudeboybert/forestecology", "html_url": "https://rseng.github.io/software/repository/github/rudeboybert/forestecology", "api_url": "https://rseng.github.io/software/api/repos/github/rudeboybert/forestecology"}, {"uid": "github/containers/podman", "html_url": "https://rseng.github.io/software/repository/github/containers/podman", "api_url": "https://rseng.github.io/software/api/repos/github/containers/podman"}, {"uid": "github/msalibian/RBF", "html_url": "https://rseng.github.io/software/repository/github/msalibian/RBF", "api_url": "https://rseng.github.io/software/api/repos/github/msalibian/RBF"}, {"uid": "github/ivastar/clear", "html_url": "https://rseng.github.io/software/repository/github/ivastar/clear", "api_url": "https://rseng.github.io/software/api/repos/github/ivastar/clear"}, {"uid": "github/astrosmili/smili", "html_url": "https://rseng.github.io/software/repository/github/astrosmili/smili", "api_url": "https://rseng.github.io/software/api/repos/github/astrosmili/smili"}, {"uid": "github/NKI-CCB/PRECISE", "html_url": "https://rseng.github.io/software/repository/github/NKI-CCB/PRECISE", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-CCB/PRECISE"}, {"uid": "github/xfangcosmo/FFTLog-and-beyond", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/FFTLog-and-beyond", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/FFTLog-and-beyond"}, {"uid": "github/xfangcosmo/2DFFTLog", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/2DFFTLog", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/2DFFTLog"}, {"uid": "github/broadinstitute/gatk", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/gatk", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/gatk"}, {"uid": "github/broadinstitute/CellBender", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/CellBender", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/CellBender"}, {"uid": "github/broadinstitute/wot", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/wot", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/wot"}, {"uid": "github/broadinstitute/Drop-seq", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/Drop-seq", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/Drop-seq"}, {"uid": "github/broadinstitute/cromwell", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/cromwell", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/cromwell"}, {"uid": "github/broadinstitute/tensorqtl", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/tensorqtl", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/tensorqtl"}, {"uid": "github/broadinstitute/picard", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/picard", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/picard"}, {"uid": "github/nuc-astro/winnet", "html_url": "https://rseng.github.io/software/repository/github/nuc-astro/winnet", "api_url": "https://rseng.github.io/software/api/repos/github/nuc-astro/winnet"}, {"uid": "github/ethankruse/koi3278", "html_url": "https://rseng.github.io/software/repository/github/ethankruse/koi3278", "api_url": "https://rseng.github.io/software/api/repos/github/ethankruse/koi3278"}, {"uid": "github/xiaziyna/PyStarshade", "html_url": "https://rseng.github.io/software/repository/github/xiaziyna/PyStarshade", "api_url": "https://rseng.github.io/software/api/repos/github/xiaziyna/PyStarshade"}, {"uid": "github/mchalela/GriSPy", "html_url": "https://rseng.github.io/software/repository/github/mchalela/GriSPy", "api_url": "https://rseng.github.io/software/api/repos/github/mchalela/GriSPy"}, {"uid": "github/zhoulinumass/ML-wPBE", "html_url": "https://rseng.github.io/software/repository/github/zhoulinumass/ML-wPBE", "api_url": "https://rseng.github.io/software/api/repos/github/zhoulinumass/ML-wPBE"}, {"uid": "github/RTIInternational/gobbli", "html_url": "https://rseng.github.io/software/repository/github/RTIInternational/gobbli", "api_url": "https://rseng.github.io/software/api/repos/github/RTIInternational/gobbli"}, {"uid": "github/the-rccg/hw2d", "html_url": "https://rseng.github.io/software/repository/github/the-rccg/hw2d", "api_url": "https://rseng.github.io/software/api/repos/github/the-rccg/hw2d"}, {"uid": "github/josegit88/SCORPIO", "html_url": "https://rseng.github.io/software/repository/github/josegit88/SCORPIO", "api_url": "https://rseng.github.io/software/api/repos/github/josegit88/SCORPIO"}, {"uid": "github/tobias-dv-lnu/s4rdm3x", "html_url": "https://rseng.github.io/software/repository/github/tobias-dv-lnu/s4rdm3x", "api_url": "https://rseng.github.io/software/api/repos/github/tobias-dv-lnu/s4rdm3x"}, {"uid": "github/aymgal/COOLEST", "html_url": "https://rseng.github.io/software/repository/github/aymgal/COOLEST", "api_url": "https://rseng.github.io/software/api/repos/github/aymgal/COOLEST"}, {"uid": "github/PeterDenton/ANA", "html_url": "https://rseng.github.io/software/repository/github/PeterDenton/ANA", "api_url": "https://rseng.github.io/software/api/repos/github/PeterDenton/ANA"}, {"uid": "github/tseemann/mlst", "html_url": "https://rseng.github.io/software/repository/github/tseemann/mlst", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/mlst"}, {"uid": "github/tseemann/barrnap", "html_url": "https://rseng.github.io/software/repository/github/tseemann/barrnap", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/barrnap"}, {"uid": "github/tseemann/samclip", "html_url": "https://rseng.github.io/software/repository/github/tseemann/samclip", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/samclip"}, {"uid": "github/tseemann/abricate", "html_url": "https://rseng.github.io/software/repository/github/tseemann/abricate", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/abricate"}, {"uid": "github/tseemann/shovill", "html_url": "https://rseng.github.io/software/repository/github/tseemann/shovill", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/shovill"}, {"uid": "github/tseemann/VelvetOptimiser", "html_url": "https://rseng.github.io/software/repository/github/tseemann/VelvetOptimiser", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/VelvetOptimiser"}, {"uid": "github/tseemann/snippy", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snippy", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snippy"}, {"uid": "github/tseemann/snp-dists", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snp-dists", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snp-dists"}, {"uid": "github/tseemann/prokka", "html_url": "https://rseng.github.io/software/repository/github/tseemann/prokka", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/prokka"}, {"uid": "github/stevertaylor/gw_pta_emulator", "html_url": "https://rseng.github.io/software/repository/github/stevertaylor/gw_pta_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/stevertaylor/gw_pta_emulator"}, {"uid": "github/theosanderson/chronumental", "html_url": "https://rseng.github.io/software/repository/github/theosanderson/chronumental", "api_url": "https://rseng.github.io/software/api/repos/github/theosanderson/chronumental"}, {"uid": "github/NeuralEnsemble/PyNN", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/PyNN", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/PyNN"}, {"uid": "github/NeuralEnsemble/elephant", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/elephant", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/elephant"}, {"uid": "github/nla-group/fABBA", "html_url": "https://rseng.github.io/software/repository/github/nla-group/fABBA", "api_url": "https://rseng.github.io/software/api/repos/github/nla-group/fABBA"}, {"uid": "github/snfactory/binaryoffset", "html_url": "https://rseng.github.io/software/repository/github/snfactory/binaryoffset", "api_url": "https://rseng.github.io/software/api/repos/github/snfactory/binaryoffset"}, {"uid": "github/jonathansick/skyoffset", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/skyoffset", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/skyoffset"}, {"uid": "github/jonathansick/MoAstro", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/MoAstro", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/MoAstro"}, {"uid": "github/jonathansick/starfish", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/starfish"}, {"uid": "github/narunlifescience/runcircos-gui", "html_url": "https://rseng.github.io/software/repository/github/narunlifescience/runcircos-gui", "api_url": "https://rseng.github.io/software/api/repos/github/narunlifescience/runcircos-gui"}, {"uid": "github/cdalvaro/machine-learning-master-thesis", "html_url": "https://rseng.github.io/software/repository/github/cdalvaro/machine-learning-master-thesis", "api_url": "https://rseng.github.io/software/api/repos/github/cdalvaro/machine-learning-master-thesis"}, {"uid": "github/YesselmanLab/rna_map", "html_url": "https://rseng.github.io/software/repository/github/YesselmanLab/rna_map", "api_url": "https://rseng.github.io/software/api/repos/github/YesselmanLab/rna_map"}, {"uid": "github/mwalmsley/zoobot", "html_url": "https://rseng.github.io/software/repository/github/mwalmsley/zoobot", "api_url": "https://rseng.github.io/software/api/repos/github/mwalmsley/zoobot"}, {"uid": "github/joboog/r2ogs6", "html_url": "https://rseng.github.io/software/repository/github/joboog/r2ogs6", "api_url": "https://rseng.github.io/software/api/repos/github/joboog/r2ogs6"}, {"uid": "github/patscott/pippi", "html_url": "https://rseng.github.io/software/repository/github/patscott/pippi", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/pippi"}, {"uid": "github/patscott/gambit_1.3", "html_url": "https://rseng.github.io/software/repository/github/patscott/gambit_1.3", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/gambit_1.3"}, {"uid": "github/patscott/ddcalc", "html_url": "https://rseng.github.io/software/repository/github/patscott/ddcalc", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/ddcalc"}, {"uid": "github/martin3141/spant", "html_url": "https://rseng.github.io/software/repository/github/martin3141/spant", "api_url": "https://rseng.github.io/software/api/repos/github/martin3141/spant"}, {"uid": "github/viash-io/viash", "html_url": "https://rseng.github.io/software/repository/github/viash-io/viash", "api_url": "https://rseng.github.io/software/api/repos/github/viash-io/viash"}, {"uid": "github/Anirbancosmo/limpy", "html_url": "https://rseng.github.io/software/repository/github/Anirbancosmo/limpy", "api_url": "https://rseng.github.io/software/api/repos/github/Anirbancosmo/limpy"}, {"uid": "github/veragluscevic/dmdd", "html_url": "https://rseng.github.io/software/repository/github/veragluscevic/dmdd", "api_url": "https://rseng.github.io/software/api/repos/github/veragluscevic/dmdd"}, {"uid": "github/yanzhanglab/Graph2GO", "html_url": "https://rseng.github.io/software/repository/github/yanzhanglab/Graph2GO", "api_url": "https://rseng.github.io/software/api/repos/github/yanzhanglab/Graph2GO"}, {"uid": "github/SpectraCollab/ORMIR_XCT", "html_url": "https://rseng.github.io/software/repository/github/SpectraCollab/ORMIR_XCT", "api_url": "https://rseng.github.io/software/api/repos/github/SpectraCollab/ORMIR_XCT"}, {"uid": "github/deephyper/deephyper", "html_url": "https://rseng.github.io/software/repository/github/deephyper/deephyper", "api_url": "https://rseng.github.io/software/api/repos/github/deephyper/deephyper"}, {"uid": "github/donishadsmith/neurocaps", "html_url": "https://rseng.github.io/software/repository/github/donishadsmith/neurocaps", "api_url": "https://rseng.github.io/software/api/repos/github/donishadsmith/neurocaps"}, {"uid": "github/BradGreig/21CMMC", "html_url": "https://rseng.github.io/software/repository/github/BradGreig/21CMMC", "api_url": "https://rseng.github.io/software/api/repos/github/BradGreig/21CMMC"}, {"uid": "github/Ouranosinc/xclim", "html_url": "https://rseng.github.io/software/repository/github/Ouranosinc/xclim", "api_url": "https://rseng.github.io/software/api/repos/github/Ouranosinc/xclim"}, {"uid": "github/astroboylrx/Rubble", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/Rubble", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/Rubble"}, {"uid": "github/astroboylrx/PLAN", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/PLAN", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/PLAN"}, {"uid": "github/peterk87/sistr_cmd", "html_url": "https://rseng.github.io/software/repository/github/peterk87/sistr_cmd", "api_url": "https://rseng.github.io/software/api/repos/github/peterk87/sistr_cmd"}, {"uid": "github/daeken/Emokit", "html_url": "https://rseng.github.io/software/repository/github/daeken/Emokit", "api_url": "https://rseng.github.io/software/api/repos/github/daeken/Emokit"}, {"uid": "github/salbalkus/CausalTables.jl", "html_url": "https://rseng.github.io/software/repository/github/salbalkus/CausalTables.jl", "api_url": "https://rseng.github.io/software/api/repos/github/salbalkus/CausalTables.jl"}, {"uid": "github/ucl-exoplanets/ExoTETHyS", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoTETHyS", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoTETHyS"}, {"uid": "github/ucl-exoplanets/TauREx3_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/TauREx3_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/TauREx3_public"}, {"uid": "github/ucl-exoplanets/ExoGAN_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoGAN_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoGAN_public"}, {"uid": "github/ucl-exoplanets/pylightcurve", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/pylightcurve", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/pylightcurve"}, {"uid": "github/czbiohub-sf/Rapid-QC-MS", "html_url": "https://rseng.github.io/software/repository/github/czbiohub-sf/Rapid-QC-MS", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub-sf/Rapid-QC-MS"}, {"uid": "github/SJ001/AI-Feynman", "html_url": "https://rseng.github.io/software/repository/github/SJ001/AI-Feynman", "api_url": "https://rseng.github.io/software/api/repos/github/SJ001/AI-Feynman"}, {"uid": "github/mpievolbio-scicomp/cancer_sim", "html_url": "https://rseng.github.io/software/repository/github/mpievolbio-scicomp/cancer_sim", "api_url": "https://rseng.github.io/software/api/repos/github/mpievolbio-scicomp/cancer_sim"}, {"uid": "github/sandialabs/pvOps", "html_url": "https://rseng.github.io/software/repository/github/sandialabs/pvOps", "api_url": "https://rseng.github.io/software/api/repos/github/sandialabs/pvOps"}, {"uid": "github/linneas/condetri", "html_url": "https://rseng.github.io/software/repository/github/linneas/condetri", "api_url": "https://rseng.github.io/software/api/repos/github/linneas/condetri"}, {"uid": "github/camfort/fortran-src", "html_url": "https://rseng.github.io/software/repository/github/camfort/fortran-src", "api_url": "https://rseng.github.io/software/api/repos/github/camfort/fortran-src"}, {"uid": "github/linqs/psl", "html_url": "https://rseng.github.io/software/repository/github/linqs/psl", "api_url": "https://rseng.github.io/software/api/repos/github/linqs/psl"}, {"uid": "github/GalletFlorian/TATOO", "html_url": "https://rseng.github.io/software/repository/github/GalletFlorian/TATOO", "api_url": "https://rseng.github.io/software/api/repos/github/GalletFlorian/TATOO"}, {"uid": "github/CornellLabofOrnithology/auk", "html_url": "https://rseng.github.io/software/repository/github/CornellLabofOrnithology/auk", "api_url": "https://rseng.github.io/software/api/repos/github/CornellLabofOrnithology/auk"}, {"uid": "github/taehoryu/TDEmass", "html_url": "https://rseng.github.io/software/repository/github/taehoryu/TDEmass", "api_url": "https://rseng.github.io/software/api/repos/github/taehoryu/TDEmass"}, {"uid": "github/TeamNCMC/cuisto", "html_url": "https://rseng.github.io/software/repository/github/TeamNCMC/cuisto", "api_url": "https://rseng.github.io/software/api/repos/github/TeamNCMC/cuisto"}, {"uid": "github/MarcNeveu/IcyDwarf", "html_url": "https://rseng.github.io/software/repository/github/MarcNeveu/IcyDwarf", "api_url": "https://rseng.github.io/software/api/repos/github/MarcNeveu/IcyDwarf"}, {"uid": "github/tloredo/CUDAHM", "html_url": "https://rseng.github.io/software/repository/github/tloredo/CUDAHM", "api_url": "https://rseng.github.io/software/api/repos/github/tloredo/CUDAHM"}, {"uid": "github/matthiasfabry/spinOS", "html_url": "https://rseng.github.io/software/repository/github/matthiasfabry/spinOS", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasfabry/spinOS"}, {"uid": "github/j-faria/kima", "html_url": "https://rseng.github.io/software/repository/github/j-faria/kima", "api_url": "https://rseng.github.io/software/api/repos/github/j-faria/kima"}, {"uid": "github/ProSolo/prosolo", "html_url": "https://rseng.github.io/software/repository/github/ProSolo/prosolo", "api_url": "https://rseng.github.io/software/api/repos/github/ProSolo/prosolo"}, {"uid": "github/smirik/resonances", "html_url": "https://rseng.github.io/software/repository/github/smirik/resonances", "api_url": "https://rseng.github.io/software/api/repos/github/smirik/resonances"}, {"uid": "github/mkenworthy/exorings", "html_url": "https://rseng.github.io/software/repository/github/mkenworthy/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/mkenworthy/exorings"}, {"uid": "github/MolecularAI/DockStreamCommunity", "html_url": "https://rseng.github.io/software/repository/github/MolecularAI/DockStreamCommunity", "api_url": "https://rseng.github.io/software/api/repos/github/MolecularAI/DockStreamCommunity"}, {"uid": "github/molgenis/graph2vr", "html_url": "https://rseng.github.io/software/repository/github/molgenis/graph2vr", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/graph2vr"}, {"uid": "github/molgenis/vibe-suppl", "html_url": "https://rseng.github.io/software/repository/github/molgenis/vibe-suppl", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/vibe-suppl"}, {"uid": "github/ArgonneCPAC/diffstar", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffstar", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffstar"}, {"uid": "github/ArgonneCPAC/dsps", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/dsps", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/dsps"}, {"uid": "github/ArgonneCPAC/diffmah", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffmah", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffmah"}, {"uid": "github/Leo-Simpson/c-lasso", "html_url": "https://rseng.github.io/software/repository/github/Leo-Simpson/c-lasso", "api_url": "https://rseng.github.io/software/api/repos/github/Leo-Simpson/c-lasso"}, {"uid": "github/nialov/fractopo", "html_url": "https://rseng.github.io/software/repository/github/nialov/fractopo", "api_url": "https://rseng.github.io/software/api/repos/github/nialov/fractopo"}, {"uid": "github/icesat2py/icepyx", "html_url": "https://rseng.github.io/software/repository/github/icesat2py/icepyx", "api_url": "https://rseng.github.io/software/api/repos/github/icesat2py/icepyx"}, {"uid": "github/IMB-Computational-Genomics-Lab/scGPS", "html_url": "https://rseng.github.io/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", "api_url": "https://rseng.github.io/software/api/repos/github/IMB-Computational-Genomics-Lab/scGPS"}, {"uid": "github/surhh/nfitsview", "html_url": "https://rseng.github.io/software/repository/github/surhh/nfitsview", "api_url": "https://rseng.github.io/software/api/repos/github/surhh/nfitsview"}, {"uid": "github/chianti-atomic/ChiantiPy", "html_url": "https://rseng.github.io/software/repository/github/chianti-atomic/ChiantiPy", "api_url": "https://rseng.github.io/software/api/repos/github/chianti-atomic/ChiantiPy"}, {"uid": "github/mariakotouza/TRIP-Tool", "html_url": "https://rseng.github.io/software/repository/github/mariakotouza/TRIP-Tool", "api_url": "https://rseng.github.io/software/api/repos/github/mariakotouza/TRIP-Tool"}, {"uid": "github/imperialchem/mrd-demo", "html_url": "https://rseng.github.io/software/repository/github/imperialchem/mrd-demo", "api_url": "https://rseng.github.io/software/api/repos/github/imperialchem/mrd-demo"}, {"uid": "github/SamDuffield/bmm", "html_url": "https://rseng.github.io/software/repository/github/SamDuffield/bmm", "api_url": "https://rseng.github.io/software/api/repos/github/SamDuffield/bmm"}, {"uid": "github/timkartar/RNAscape", "html_url": "https://rseng.github.io/software/repository/github/timkartar/RNAscape", "api_url": "https://rseng.github.io/software/api/repos/github/timkartar/RNAscape"}, {"uid": "github/SGpp/DisCoTec", "html_url": "https://rseng.github.io/software/repository/github/SGpp/DisCoTec", "api_url": "https://rseng.github.io/software/api/repos/github/SGpp/DisCoTec"}, {"uid": "github/abhisrkckl/Vela.jl", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/Vela.jl", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/Vela.jl"}, {"uid": "github/abhisrkckl/GWecc", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/GWecc", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/GWecc"}, {"uid": "github/projectcuisines/thai_trilogy_code", "html_url": "https://rseng.github.io/software/repository/github/projectcuisines/thai_trilogy_code", "api_url": "https://rseng.github.io/software/api/repos/github/projectcuisines/thai_trilogy_code"}, {"uid": "github/saeyslab/CytoNorm_Figures", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/CytoNorm_Figures", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/CytoNorm_Figures"}, {"uid": "github/saeyslab/nichenetr", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/nichenetr", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/nichenetr"}, {"uid": "github/saeyslab/PeacoQC", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/PeacoQC", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/PeacoQC"}, {"uid": "github/christopher-vollmers/C3POa", "html_url": "https://rseng.github.io/software/repository/github/christopher-vollmers/C3POa", "api_url": "https://rseng.github.io/software/api/repos/github/christopher-vollmers/C3POa"}, {"uid": "github/inigozubeldia/cosmocnc", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/cosmocnc", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/cosmocnc"}, {"uid": "github/inigozubeldia/szifi", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/szifi", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/szifi"}, {"uid": "github/dokester/BayesicFitting", "html_url": "https://rseng.github.io/software/repository/github/dokester/BayesicFitting", "api_url": "https://rseng.github.io/software/api/repos/github/dokester/BayesicFitting"}, {"uid": "github/OpenQuantumComputing/quantumreservoirpy", "html_url": "https://rseng.github.io/software/repository/github/OpenQuantumComputing/quantumreservoirpy", "api_url": "https://rseng.github.io/software/api/repos/github/OpenQuantumComputing/quantumreservoirpy"}, {"uid": "github/MetaboComp/TriplotGUI", "html_url": "https://rseng.github.io/software/repository/github/MetaboComp/TriplotGUI", "api_url": "https://rseng.github.io/software/api/repos/github/MetaboComp/TriplotGUI"}, {"uid": "github/genome/somatic-sniper", "html_url": "https://rseng.github.io/software/repository/github/genome/somatic-sniper", "api_url": "https://rseng.github.io/software/api/repos/github/genome/somatic-sniper"}, {"uid": "github/genome/bam-readcount", "html_url": "https://rseng.github.io/software/repository/github/genome/bam-readcount", "api_url": "https://rseng.github.io/software/api/repos/github/genome/bam-readcount"}, {"uid": "github/matthewholman/assist", "html_url": "https://rseng.github.io/software/repository/github/matthewholman/assist", "api_url": "https://rseng.github.io/software/api/repos/github/matthewholman/assist"}, {"uid": "github/spiketools/spiketools", "html_url": "https://rseng.github.io/software/repository/github/spiketools/spiketools", "api_url": "https://rseng.github.io/software/api/repos/github/spiketools/spiketools"}, {"uid": "github/christinahedges/contaminante", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/contaminante", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/contaminante"}, {"uid": "github/christinahedges/TESS-SIP", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/TESS-SIP", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/TESS-SIP"}, {"uid": "github/msailer1234/JWST_Simulation", "html_url": "https://rseng.github.io/software/repository/github/msailer1234/JWST_Simulation", "api_url": "https://rseng.github.io/software/api/repos/github/msailer1234/JWST_Simulation"}, {"uid": "github/USU-Analytics-Solution-Center/Bruno.jl", "html_url": "https://rseng.github.io/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", "api_url": "https://rseng.github.io/software/api/repos/github/USU-Analytics-Solution-Center/Bruno.jl"}, {"uid": "github/ocean-eddy-cpt/gcm-filters", "html_url": "https://rseng.github.io/software/repository/github/ocean-eddy-cpt/gcm-filters", "api_url": "https://rseng.github.io/software/api/repos/github/ocean-eddy-cpt/gcm-filters"}, {"uid": "github/hippke/pulses", "html_url": "https://rseng.github.io/software/repository/github/hippke/pulses", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pulses"}, {"uid": "github/hippke/tls", "html_url": "https://rseng.github.io/software/repository/github/hippke/tls", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/tls"}, {"uid": "github/hippke/pandora", "html_url": "https://rseng.github.io/software/repository/github/hippke/pandora", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pandora"}, {"uid": "github/hippke/PyOSE", "html_url": "https://rseng.github.io/software/repository/github/hippke/PyOSE", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/PyOSE"}, {"uid": "github/hippke/communication", "html_url": "https://rseng.github.io/software/repository/github/hippke/communication", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/communication"}, {"uid": "github/hippke/wotan", "html_url": "https://rseng.github.io/software/repository/github/hippke/wotan", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/wotan"}, {"uid": "github/schmidtfa/pyrasa", "html_url": "https://rseng.github.io/software/repository/github/schmidtfa/pyrasa", "api_url": "https://rseng.github.io/software/api/repos/github/schmidtfa/pyrasa"}, {"uid": "github/horvatovichlab/MSIWarp", "html_url": "https://rseng.github.io/software/repository/github/horvatovichlab/MSIWarp", "api_url": "https://rseng.github.io/software/api/repos/github/horvatovichlab/MSIWarp"}, {"uid": "github/mcsiple/mmrefpoints", "html_url": "https://rseng.github.io/software/repository/github/mcsiple/mmrefpoints", "api_url": "https://rseng.github.io/software/api/repos/github/mcsiple/mmrefpoints"}, {"uid": "github/druglogics/pydruglogics", "html_url": "https://rseng.github.io/software/repository/github/druglogics/pydruglogics", "api_url": "https://rseng.github.io/software/api/repos/github/druglogics/pydruglogics"}, {"uid": "github/djgroen/MPWide", "html_url": "https://rseng.github.io/software/repository/github/djgroen/MPWide", "api_url": "https://rseng.github.io/software/api/repos/github/djgroen/MPWide"}, {"uid": "github/voutcn/megahit", "html_url": "https://rseng.github.io/software/repository/github/voutcn/megahit", "api_url": "https://rseng.github.io/software/api/repos/github/voutcn/megahit"}, {"uid": "github/taoliu/MACS", "html_url": "https://rseng.github.io/software/repository/github/taoliu/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/taoliu/MACS"}, {"uid": "github/AUTODIAL/AutoEIS", "html_url": "https://rseng.github.io/software/repository/github/AUTODIAL/AutoEIS", "api_url": "https://rseng.github.io/software/api/repos/github/AUTODIAL/AutoEIS"}, {"uid": "github/mes5k/amap-align", "html_url": "https://rseng.github.io/software/repository/github/mes5k/amap-align", "api_url": "https://rseng.github.io/software/api/repos/github/mes5k/amap-align"}, {"uid": "github/brian-lau/MatlabAUC", "html_url": "https://rseng.github.io/software/repository/github/brian-lau/MatlabAUC", "api_url": "https://rseng.github.io/software/api/repos/github/brian-lau/MatlabAUC"}, {"uid": "github/arhstevens/DarkSage", "html_url": "https://rseng.github.io/software/repository/github/arhstevens/DarkSage", "api_url": "https://rseng.github.io/software/api/repos/github/arhstevens/DarkSage"}, {"uid": "github/ctkelley/MultiPrecisionArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/ctkelley/MultiPrecisionArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ctkelley/MultiPrecisionArrays.jl"}, {"uid": "github/DaymudeLab/assembly-theory", "html_url": "https://rseng.github.io/software/repository/github/DaymudeLab/assembly-theory", "api_url": "https://rseng.github.io/software/api/repos/github/DaymudeLab/assembly-theory"}, {"uid": "github/mwaskom/seaborn", "html_url": "https://rseng.github.io/software/repository/github/mwaskom/seaborn", "api_url": "https://rseng.github.io/software/api/repos/github/mwaskom/seaborn"}, {"uid": "github/trevisanj/PFANT", "html_url": "https://rseng.github.io/software/repository/github/trevisanj/PFANT", "api_url": "https://rseng.github.io/software/api/repos/github/trevisanj/PFANT"}, {"uid": "github/mikecokina/elisa", "html_url": "https://rseng.github.io/software/repository/github/mikecokina/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/mikecokina/elisa"}, {"uid": "github/MyWebIntelligence/MyWebIntelligencePython", "html_url": "https://rseng.github.io/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", "api_url": "https://rseng.github.io/software/api/repos/github/MyWebIntelligence/MyWebIntelligencePython"}, {"uid": "github/freelawproject/eyecite", "html_url": "https://rseng.github.io/software/repository/github/freelawproject/eyecite", "api_url": "https://rseng.github.io/software/api/repos/github/freelawproject/eyecite"}, {"uid": "github/scwatts/fastspar", "html_url": "https://rseng.github.io/software/repository/github/scwatts/fastspar", "api_url": "https://rseng.github.io/software/api/repos/github/scwatts/fastspar"}, {"uid": "github/AlidesChimin/SATA", "html_url": "https://rseng.github.io/software/repository/github/AlidesChimin/SATA", "api_url": "https://rseng.github.io/software/api/repos/github/AlidesChimin/SATA"}, {"uid": "github/nebblu/ReACT", "html_url": "https://rseng.github.io/software/repository/github/nebblu/ReACT", "api_url": "https://rseng.github.io/software/api/repos/github/nebblu/ReACT"}, {"uid": "github/HWang-Summit/HCGrid", "html_url": "https://rseng.github.io/software/repository/github/HWang-Summit/HCGrid", "api_url": "https://rseng.github.io/software/api/repos/github/HWang-Summit/HCGrid"}, {"uid": "github/studla/RYUTO", "html_url": "https://rseng.github.io/software/repository/github/studla/RYUTO", "api_url": "https://rseng.github.io/software/api/repos/github/studla/RYUTO"}, {"uid": "github/D4san/MultiREx-public", "html_url": "https://rseng.github.io/software/repository/github/D4san/MultiREx-public", "api_url": "https://rseng.github.io/software/api/repos/github/D4san/MultiREx-public"}, {"uid": "github/aomlomics/tourmaline", "html_url": "https://rseng.github.io/software/repository/github/aomlomics/tourmaline", "api_url": "https://rseng.github.io/software/api/repos/github/aomlomics/tourmaline"}, {"uid": "github/marbl/Winnowmap", "html_url": "https://rseng.github.io/software/repository/github/marbl/Winnowmap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Winnowmap"}, {"uid": "github/marbl/Mash", "html_url": "https://rseng.github.io/software/repository/github/marbl/Mash", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Mash"}, {"uid": "github/marbl/MashMap", "html_url": "https://rseng.github.io/software/repository/github/marbl/MashMap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/MashMap"}, {"uid": "github/marbl/Krona", "html_url": "https://rseng.github.io/software/repository/github/marbl/Krona", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Krona"}, {"uid": "github/vallis/mc3pta", "html_url": "https://rseng.github.io/software/repository/github/vallis/mc3pta", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/mc3pta"}, {"uid": "github/vallis/libstempo", "html_url": "https://rseng.github.io/software/repository/github/vallis/libstempo", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/libstempo"}, {"uid": "github/kno10/python-kmedoids", "html_url": "https://rseng.github.io/software/repository/github/kno10/python-kmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/kno10/python-kmedoids"}, {"uid": "github/DrafProject/elmada", "html_url": "https://rseng.github.io/software/repository/github/DrafProject/elmada", "api_url": "https://rseng.github.io/software/api/repos/github/DrafProject/elmada"}, {"uid": "github/siavashk/pycpd", "html_url": "https://rseng.github.io/software/repository/github/siavashk/pycpd", "api_url": "https://rseng.github.io/software/api/repos/github/siavashk/pycpd"}, {"uid": "github/spectralcode/OCTproZ", "html_url": "https://rseng.github.io/software/repository/github/spectralcode/OCTproZ", "api_url": "https://rseng.github.io/software/api/repos/github/spectralcode/OCTproZ"}, {"uid": "github/4dn-dcic/pairix", "html_url": "https://rseng.github.io/software/repository/github/4dn-dcic/pairix", "api_url": "https://rseng.github.io/software/api/repos/github/4dn-dcic/pairix"}, {"uid": "github/SCIInstitute/UncertainSCI", "html_url": "https://rseng.github.io/software/repository/github/SCIInstitute/UncertainSCI", "api_url": "https://rseng.github.io/software/api/repos/github/SCIInstitute/UncertainSCI"}, {"uid": "github/nitadori/SCF-FDPS", "html_url": "https://rseng.github.io/software/repository/github/nitadori/SCF-FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/nitadori/SCF-FDPS"}, {"uid": "github/microplastics-cluster/fragment-mnp", "html_url": "https://rseng.github.io/software/repository/github/microplastics-cluster/fragment-mnp", "api_url": "https://rseng.github.io/software/api/repos/github/microplastics-cluster/fragment-mnp"}, {"uid": "github/james-m-osborn/astrosat", "html_url": "https://rseng.github.io/software/repository/github/james-m-osborn/astrosat", "api_url": "https://rseng.github.io/software/api/repos/github/james-m-osborn/astrosat"}, {"uid": "github/cedrus-opensource/pyxid", "html_url": "https://rseng.github.io/software/repository/github/cedrus-opensource/pyxid", "api_url": "https://rseng.github.io/software/api/repos/github/cedrus-opensource/pyxid"}, {"uid": "github/WilliamLwj/PyXAB", "html_url": "https://rseng.github.io/software/repository/github/WilliamLwj/PyXAB", "api_url": "https://rseng.github.io/software/api/repos/github/WilliamLwj/PyXAB"}, {"uid": "github/geza-kovacs/tran_k2", "html_url": "https://rseng.github.io/software/repository/github/geza-kovacs/tran_k2", "api_url": "https://rseng.github.io/software/api/repos/github/geza-kovacs/tran_k2"}, {"uid": "github/jianghuaijie/scLRTC", "html_url": "https://rseng.github.io/software/repository/github/jianghuaijie/scLRTC", "api_url": "https://rseng.github.io/software/api/repos/github/jianghuaijie/scLRTC"}, {"uid": "github/lmwalkowicz/Cheetah", "html_url": "https://rseng.github.io/software/repository/github/lmwalkowicz/Cheetah", "api_url": "https://rseng.github.io/software/api/repos/github/lmwalkowicz/Cheetah"}, {"uid": "github/vincentvaneylen/k2photometry", "html_url": "https://rseng.github.io/software/repository/github/vincentvaneylen/k2photometry", "api_url": "https://rseng.github.io/software/api/repos/github/vincentvaneylen/k2photometry"}, {"uid": "github/MP-Gadget/bigfile", "html_url": "https://rseng.github.io/software/repository/github/MP-Gadget/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/MP-Gadget/bigfile"}, {"uid": "github/candYgene/siga", "html_url": "https://rseng.github.io/software/repository/github/candYgene/siga", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/siga"}, {"uid": "github/candYgene/abg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/abg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/abg-ld"}, {"uid": "github/candYgene/QTM", "html_url": "https://rseng.github.io/software/repository/github/candYgene/QTM", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/QTM"}, {"uid": "github/candYgene/pbg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/pbg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/pbg-ld"}, {"uid": "github/jgieseler/solarmach", "html_url": "https://rseng.github.io/software/repository/github/jgieseler/solarmach", "api_url": "https://rseng.github.io/software/api/repos/github/jgieseler/solarmach"}, {"uid": "github/MegaMorph/galapagos-c", "html_url": "https://rseng.github.io/software/repository/github/MegaMorph/galapagos-c", "api_url": "https://rseng.github.io/software/api/repos/github/MegaMorph/galapagos-c"}, {"uid": "github/sfeeney/hh0", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/hh0", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/hh0"}, {"uid": "github/sfeeney/ddspectra", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/ddspectra", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/ddspectra"}, {"uid": "github/sxs-collaboration/spectre", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/spectre", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/spectre"}, {"uid": "github/sxs-collaboration/gwsurrogate", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/gwsurrogate", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/gwsurrogate"}, {"uid": "github/gtw2i/GA-Galaxy", "html_url": "https://rseng.github.io/software/repository/github/gtw2i/GA-Galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/gtw2i/GA-Galaxy"}, {"uid": "github/ekaterinailin/AltaiPony", "html_url": "https://rseng.github.io/software/repository/github/ekaterinailin/AltaiPony", "api_url": "https://rseng.github.io/software/api/repos/github/ekaterinailin/AltaiPony"}, {"uid": "github/sciris/sciris", "html_url": "https://rseng.github.io/software/repository/github/sciris/sciris", "api_url": "https://rseng.github.io/software/api/repos/github/sciris/sciris"}, {"uid": "github/PyLops/pylops-mpi", "html_url": "https://rseng.github.io/software/repository/github/PyLops/pylops-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/PyLops/pylops-mpi"}, {"uid": "github/frescigno/magpy_rv", "html_url": "https://rseng.github.io/software/repository/github/frescigno/magpy_rv", "api_url": "https://rseng.github.io/software/api/repos/github/frescigno/magpy_rv"}, {"uid": "github/anuwu/DAGN-Blindtest", "html_url": "https://rseng.github.io/software/repository/github/anuwu/DAGN-Blindtest", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/DAGN-Blindtest"}, {"uid": "github/anuwu/GOTHIC", "html_url": "https://rseng.github.io/software/repository/github/anuwu/GOTHIC", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/GOTHIC"}, {"uid": "github/jfalconbarroso/BAYES-LOSVD", "html_url": "https://rseng.github.io/software/repository/github/jfalconbarroso/BAYES-LOSVD", "api_url": "https://rseng.github.io/software/api/repos/github/jfalconbarroso/BAYES-LOSVD"}, {"uid": "github/TravisWheelerLab/VIBES", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/VIBES", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/VIBES"}, {"uid": "github/TravisWheelerLab/NINJA", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/NINJA", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/NINJA"}, {"uid": "github/gadomski/antimeridian", "html_url": "https://rseng.github.io/software/repository/github/gadomski/antimeridian", "api_url": "https://rseng.github.io/software/api/repos/github/gadomski/antimeridian"}, {"uid": "github/erf-model/ERF", "html_url": "https://rseng.github.io/software/repository/github/erf-model/ERF", "api_url": "https://rseng.github.io/software/api/repos/github/erf-model/ERF"}, {"uid": "github/phenomecentre/nPYc-Toolbox", "html_url": "https://rseng.github.io/software/repository/github/phenomecentre/nPYc-Toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/phenomecentre/nPYc-Toolbox"}, {"uid": "github/witseie/fpgaperm", "html_url": "https://rseng.github.io/software/repository/github/witseie/fpgaperm", "api_url": "https://rseng.github.io/software/api/repos/github/witseie/fpgaperm"}, {"uid": "github/Santiso-Group/despasito", "html_url": "https://rseng.github.io/software/repository/github/Santiso-Group/despasito", "api_url": "https://rseng.github.io/software/api/repos/github/Santiso-Group/despasito"}, {"uid": "github/Shamrock-code/Shamrock", "html_url": "https://rseng.github.io/software/repository/github/Shamrock-code/Shamrock", "api_url": "https://rseng.github.io/software/api/repos/github/Shamrock-code/Shamrock"}, {"uid": "github/songweizhi/Binning_refiner", "html_url": "https://rseng.github.io/software/repository/github/songweizhi/Binning_refiner", "api_url": "https://rseng.github.io/software/api/repos/github/songweizhi/Binning_refiner"}, {"uid": "github/MichaelCretignier/Rassine_public", "html_url": "https://rseng.github.io/software/repository/github/MichaelCretignier/Rassine_public", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelCretignier/Rassine_public"}, {"uid": "github/barklem/kaulakys", "html_url": "https://rseng.github.io/software/repository/github/barklem/kaulakys", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/kaulakys"}, {"uid": "github/barklem/abo-cross", "html_url": "https://rseng.github.io/software/repository/github/barklem/abo-cross", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/abo-cross"}, {"uid": "github/barklem/mswavef", "html_url": "https://rseng.github.io/software/repository/github/barklem/mswavef", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/mswavef"}, {"uid": "github/barklem/hlinop", "html_url": "https://rseng.github.io/software/repository/github/barklem/hlinop", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/hlinop"}, {"uid": "github/tool-bin/ukbcc", "html_url": "https://rseng.github.io/software/repository/github/tool-bin/ukbcc", "api_url": "https://rseng.github.io/software/api/repos/github/tool-bin/ukbcc"}, {"uid": "github/michalc/OpenTTDLab", "html_url": "https://rseng.github.io/software/repository/github/michalc/OpenTTDLab", "api_url": "https://rseng.github.io/software/api/repos/github/michalc/OpenTTDLab"}, {"uid": "github/mh-skjelvareid/synaptus", "html_url": "https://rseng.github.io/software/repository/github/mh-skjelvareid/synaptus", "api_url": "https://rseng.github.io/software/api/repos/github/mh-skjelvareid/synaptus"}, {"uid": "github/caimeng2/seesus", "html_url": "https://rseng.github.io/software/repository/github/caimeng2/seesus", "api_url": "https://rseng.github.io/software/api/repos/github/caimeng2/seesus"}, {"uid": "github/cbalbin-FIU/Epitopedia", "html_url": "https://rseng.github.io/software/repository/github/cbalbin-FIU/Epitopedia", "api_url": "https://rseng.github.io/software/api/repos/github/cbalbin-FIU/Epitopedia"}, {"uid": "github/Razumovskyy/MARFA", "html_url": "https://rseng.github.io/software/repository/github/Razumovskyy/MARFA", "api_url": "https://rseng.github.io/software/api/repos/github/Razumovskyy/MARFA"}, {"uid": "github/i4Ds/Karabo-Pipeline", "html_url": "https://rseng.github.io/software/repository/github/i4Ds/Karabo-Pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/i4Ds/Karabo-Pipeline"}, {"uid": "github/alexji/LESSPayne", "html_url": "https://rseng.github.io/software/repository/github/alexji/LESSPayne", "api_url": "https://rseng.github.io/software/api/repos/github/alexji/LESSPayne"}, {"uid": "github/WelbornGroup/ELECTRIC", "html_url": "https://rseng.github.io/software/repository/github/WelbornGroup/ELECTRIC", "api_url": "https://rseng.github.io/software/api/repos/github/WelbornGroup/ELECTRIC"}, {"uid": "github/mlower/rmnest", "html_url": "https://rseng.github.io/software/repository/github/mlower/rmnest", "api_url": "https://rseng.github.io/software/api/repos/github/mlower/rmnest"}, {"uid": "github/mscaudill/openseize", "html_url": "https://rseng.github.io/software/repository/github/mscaudill/openseize", "api_url": "https://rseng.github.io/software/api/repos/github/mscaudill/openseize"}, {"uid": "github/markur4/plotastic", "html_url": "https://rseng.github.io/software/repository/github/markur4/plotastic", "api_url": "https://rseng.github.io/software/api/repos/github/markur4/plotastic"}, {"uid": "github/VirtualPlantLab/PlantSimEngine.jl", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlantLab/PlantSimEngine.jl"}, {"uid": "github/FDPS/FDPS", "html_url": "https://rseng.github.io/software/repository/github/FDPS/FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/FDPS/FDPS"}, {"uid": "github/cellgeni/cells2visium", "html_url": "https://rseng.github.io/software/repository/github/cellgeni/cells2visium", "api_url": "https://rseng.github.io/software/api/repos/github/cellgeni/cells2visium"}, {"uid": "github/UM-KevinHe/surtvep", "html_url": "https://rseng.github.io/software/repository/github/UM-KevinHe/surtvep", "api_url": "https://rseng.github.io/software/api/repos/github/UM-KevinHe/surtvep"}, {"uid": "github/NIFTy-PPL/JAXbind", "html_url": "https://rseng.github.io/software/repository/github/NIFTy-PPL/JAXbind", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTy-PPL/JAXbind"}, {"uid": "github/casasglobal-org/psymple", "html_url": "https://rseng.github.io/software/repository/github/casasglobal-org/psymple", "api_url": "https://rseng.github.io/software/api/repos/github/casasglobal-org/psymple"}, {"uid": "github/PdIPS/CBX", "html_url": "https://rseng.github.io/software/repository/github/PdIPS/CBX", "api_url": "https://rseng.github.io/software/api/repos/github/PdIPS/CBX"}, {"uid": "github/rrwick/Filtlong", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Filtlong", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Filtlong"}, {"uid": "github/rrwick/Deepbinner", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Deepbinner", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Deepbinner"}, {"uid": "github/rrwick/Bandage", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Bandage", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Bandage"}, {"uid": "github/rrwick/Unicycler", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Unicycler", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Unicycler"}, {"uid": "github/rrwick/Porechop", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Porechop", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Porechop"}, {"uid": "github/cumbof/honto", "html_url": "https://rseng.github.io/software/repository/github/cumbof/honto", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/honto"}, {"uid": "github/cumbof/MetaSBT-DBs", "html_url": "https://rseng.github.io/software/repository/github/cumbof/MetaSBT-DBs", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/MetaSBT-DBs"}, {"uid": "github/xdqso/xdqso", "html_url": "https://rseng.github.io/software/repository/github/xdqso/xdqso", "api_url": "https://rseng.github.io/software/api/repos/github/xdqso/xdqso"}, {"uid": "github/mgalardini/pyseer", "html_url": "https://rseng.github.io/software/repository/github/mgalardini/pyseer", "api_url": "https://rseng.github.io/software/api/repos/github/mgalardini/pyseer"}, {"uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", "html_url": "https://rseng.github.io/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", "api_url": "https://rseng.github.io/software/api/repos/github/ismael-mendoza/ShapeMeasurementFisherFormalism"}, {"uid": "github/akikuno/cstag", "html_url": "https://rseng.github.io/software/repository/github/akikuno/cstag", "api_url": "https://rseng.github.io/software/api/repos/github/akikuno/cstag"}, {"uid": "github/GeomScale/volesti", "html_url": "https://rseng.github.io/software/repository/github/GeomScale/volesti", "api_url": "https://rseng.github.io/software/api/repos/github/GeomScale/volesti"}, {"uid": "github/C2SM-RCM/emiproc", "html_url": "https://rseng.github.io/software/repository/github/C2SM-RCM/emiproc", "api_url": "https://rseng.github.io/software/api/repos/github/C2SM-RCM/emiproc"}, {"uid": "github/songningqiang/CosmoLED", "html_url": "https://rseng.github.io/software/repository/github/songningqiang/CosmoLED", "api_url": "https://rseng.github.io/software/api/repos/github/songningqiang/CosmoLED"}, {"uid": "github/phil-mansfield/shellfish", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/shellfish", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/shellfish"}, {"uid": "github/phil-mansfield/gotetra", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/gotetra", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/gotetra"}, {"uid": "github/ismaelpessa/PyMUSE", "html_url": "https://rseng.github.io/software/repository/github/ismaelpessa/PyMUSE", "api_url": "https://rseng.github.io/software/api/repos/github/ismaelpessa/PyMUSE"}, {"uid": "github/puregome/notebooks", "html_url": "https://rseng.github.io/software/repository/github/puregome/notebooks", "api_url": "https://rseng.github.io/software/api/repos/github/puregome/notebooks"}, {"uid": "github/Cristianetaniguti/Reads2Map", "html_url": "https://rseng.github.io/software/repository/github/Cristianetaniguti/Reads2Map", "api_url": "https://rseng.github.io/software/api/repos/github/Cristianetaniguti/Reads2Map"}, {"uid": "github/kehrlab/PopDel", "html_url": "https://rseng.github.io/software/repository/github/kehrlab/PopDel", "api_url": "https://rseng.github.io/software/api/repos/github/kehrlab/PopDel"}, {"uid": "github/galsci/pysm", "html_url": "https://rseng.github.io/software/repository/github/galsci/pysm", "api_url": "https://rseng.github.io/software/api/repos/github/galsci/pysm"}, {"uid": "github/rychallener/ThERESA", "html_url": "https://rseng.github.io/software/repository/github/rychallener/ThERESA", "api_url": "https://rseng.github.io/software/api/repos/github/rychallener/ThERESA"}, {"uid": "github/justinread/gravsphere", "html_url": "https://rseng.github.io/software/repository/github/justinread/gravsphere", "api_url": "https://rseng.github.io/software/api/repos/github/justinread/gravsphere"}, {"uid": "github/jeschaef/Graph4Med", "html_url": "https://rseng.github.io/software/repository/github/jeschaef/Graph4Med", "api_url": "https://rseng.github.io/software/api/repos/github/jeschaef/Graph4Med"}, {"uid": "github/linnarsson-lab/loompy", "html_url": "https://rseng.github.io/software/repository/github/linnarsson-lab/loompy", "api_url": "https://rseng.github.io/software/api/repos/github/linnarsson-lab/loompy"}, {"uid": "github/ankushaggarwal/pymecht", "html_url": "https://rseng.github.io/software/repository/github/ankushaggarwal/pymecht", "api_url": "https://rseng.github.io/software/api/repos/github/ankushaggarwal/pymecht"}, {"uid": "github/TNEL-UCSD/autolfads-deploy", "html_url": "https://rseng.github.io/software/repository/github/TNEL-UCSD/autolfads-deploy", "api_url": "https://rseng.github.io/software/api/repos/github/TNEL-UCSD/autolfads-deploy"}, {"uid": "github/RussellJurek/busy-function-fitting", "html_url": "https://rseng.github.io/software/repository/github/RussellJurek/busy-function-fitting", "api_url": "https://rseng.github.io/software/api/repos/github/RussellJurek/busy-function-fitting"}, {"uid": "github/MIAnalyzer/MIA", "html_url": "https://rseng.github.io/software/repository/github/MIAnalyzer/MIA", "api_url": "https://rseng.github.io/software/api/repos/github/MIAnalyzer/MIA"}, {"uid": "github/hongwanliu/DarkHistory", "html_url": "https://rseng.github.io/software/repository/github/hongwanliu/DarkHistory", "api_url": "https://rseng.github.io/software/api/repos/github/hongwanliu/DarkHistory"}, {"uid": "github/genomicepidemiology/ARGprofiler", "html_url": "https://rseng.github.io/software/repository/github/genomicepidemiology/ARGprofiler", "api_url": "https://rseng.github.io/software/api/repos/github/genomicepidemiology/ARGprofiler"}, {"uid": "github/brackham/speclib", "html_url": "https://rseng.github.io/software/repository/github/brackham/speclib", "api_url": "https://rseng.github.io/software/api/repos/github/brackham/speclib"}, {"uid": "github/adrn/schwimmbad", "html_url": "https://rseng.github.io/software/repository/github/adrn/schwimmbad", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/schwimmbad"}, {"uid": "github/adrn/pyia", "html_url": "https://rseng.github.io/software/repository/github/adrn/pyia", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/pyia"}, {"uid": "github/adrn/SuperFreq", "html_url": "https://rseng.github.io/software/repository/github/adrn/SuperFreq", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/SuperFreq"}, {"uid": "github/ialopezt/GalLenspy", "html_url": "https://rseng.github.io/software/repository/github/ialopezt/GalLenspy", "api_url": "https://rseng.github.io/software/api/repos/github/ialopezt/GalLenspy"}, {"uid": "github/DeepMIALab/UC-NfNet", "html_url": "https://rseng.github.io/software/repository/github/DeepMIALab/UC-NfNet", "api_url": "https://rseng.github.io/software/api/repos/github/DeepMIALab/UC-NfNet"}, {"uid": "github/starkit/wsynphot", "html_url": "https://rseng.github.io/software/repository/github/starkit/wsynphot", "api_url": "https://rseng.github.io/software/api/repos/github/starkit/wsynphot"}, {"uid": "github/oorb/oorb", "html_url": "https://rseng.github.io/software/repository/github/oorb/oorb", "api_url": "https://rseng.github.io/software/api/repos/github/oorb/oorb"}, {"uid": "github/munich-quantum-toolkit/core", "html_url": "https://rseng.github.io/software/repository/github/munich-quantum-toolkit/core", "api_url": "https://rseng.github.io/software/api/repos/github/munich-quantum-toolkit/core"}, {"uid": "github/evolbioinfo/bdei", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdei", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdei"}, {"uid": "github/evolbioinfo/treesimulator", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/treesimulator", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/treesimulator"}, {"uid": "github/evolbioinfo/bdct", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdct", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdct"}, {"uid": "github/evolbioinfo/bdpn", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdpn", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdpn"}, {"uid": "github/noatgnu/catapult", "html_url": "https://rseng.github.io/software/repository/github/noatgnu/catapult", "api_url": "https://rseng.github.io/software/api/repos/github/noatgnu/catapult"}, {"uid": "github/neuralgraphs/diman", "html_url": "https://rseng.github.io/software/repository/github/neuralgraphs/diman", "api_url": "https://rseng.github.io/software/api/repos/github/neuralgraphs/diman"}, {"uid": "github/jtksai/PyCOOL", "html_url": "https://rseng.github.io/software/repository/github/jtksai/PyCOOL", "api_url": "https://rseng.github.io/software/api/repos/github/jtksai/PyCOOL"}, {"uid": "github/Theano/Theano", "html_url": "https://rseng.github.io/software/repository/github/Theano/Theano", "api_url": "https://rseng.github.io/software/api/repos/github/Theano/Theano"}, {"uid": "github/levuvietphong/pyTCR", "html_url": "https://rseng.github.io/software/repository/github/levuvietphong/pyTCR", "api_url": "https://rseng.github.io/software/api/repos/github/levuvietphong/pyTCR"}, {"uid": "github/christophuv/PeakBot_example", "html_url": "https://rseng.github.io/software/repository/github/christophuv/PeakBot_example", "api_url": "https://rseng.github.io/software/api/repos/github/christophuv/PeakBot_example"}, {"uid": "github/jmd-dk/concept", "html_url": "https://rseng.github.io/software/repository/github/jmd-dk/concept", "api_url": "https://rseng.github.io/software/api/repos/github/jmd-dk/concept"}, {"uid": "github/aasensio/molpop-cep", "html_url": "https://rseng.github.io/software/repository/github/aasensio/molpop-cep", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/molpop-cep"}, {"uid": "github/aasensio/sicon", "html_url": "https://rseng.github.io/software/repository/github/aasensio/sicon", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/sicon"}, {"uid": "github/aasensio/torchmfbd", "html_url": "https://rseng.github.io/software/repository/github/aasensio/torchmfbd", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/torchmfbd"}, {"uid": "github/aasensio/hazel", "html_url": "https://rseng.github.io/software/repository/github/aasensio/hazel", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/hazel"}, {"uid": "github/cosimoNigro/agnpy", "html_url": "https://rseng.github.io/software/repository/github/cosimoNigro/agnpy", "api_url": "https://rseng.github.io/software/api/repos/github/cosimoNigro/agnpy"}, {"uid": "github/natashabatalha/picaso", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/picaso", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/picaso"}, {"uid": "github/natashabatalha/PandExo", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/PandExo", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/PandExo"}, {"uid": "github/andresGranadosC/GalRotpy", "html_url": "https://rseng.github.io/software/repository/github/andresGranadosC/GalRotpy", "api_url": "https://rseng.github.io/software/api/repos/github/andresGranadosC/GalRotpy"}, {"uid": "github/samb8s/PsrPopPy", "html_url": "https://rseng.github.io/software/repository/github/samb8s/PsrPopPy", "api_url": "https://rseng.github.io/software/api/repos/github/samb8s/PsrPopPy"}, {"uid": "github/molscat/molscat", "html_url": "https://rseng.github.io/software/repository/github/molscat/molscat", "api_url": "https://rseng.github.io/software/api/repos/github/molscat/molscat"}, {"uid": "github/christophmschaefer/miluphcuda", "html_url": "https://rseng.github.io/software/repository/github/christophmschaefer/miluphcuda", "api_url": "https://rseng.github.io/software/api/repos/github/christophmschaefer/miluphcuda"}, {"uid": "github/debbiemarkslab/plmc", "html_url": "https://rseng.github.io/software/repository/github/debbiemarkslab/plmc", "api_url": "https://rseng.github.io/software/api/repos/github/debbiemarkslab/plmc"}, {"uid": "github/healpy/healpy", "html_url": "https://rseng.github.io/software/repository/github/healpy/healpy", "api_url": "https://rseng.github.io/software/api/repos/github/healpy/healpy"}, {"uid": "github/nilearn/nilearnhub.io", "html_url": "https://rseng.github.io/software/repository/github/nilearn/nilearnhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/nilearn/nilearnhub.io"}, {"uid": "github/EskelandLab/ShinyArchRUiO", "html_url": "https://rseng.github.io/software/repository/github/EskelandLab/ShinyArchRUiO", "api_url": "https://rseng.github.io/software/api/repos/github/EskelandLab/ShinyArchRUiO"}, {"uid": "github/OwenWard/ppdiag", "html_url": "https://rseng.github.io/software/repository/github/OwenWard/ppdiag", "api_url": "https://rseng.github.io/software/api/repos/github/OwenWard/ppdiag"}, {"uid": "github/dnonatar/Sequoia", "html_url": "https://rseng.github.io/software/repository/github/dnonatar/Sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/dnonatar/Sequoia"}, {"uid": "github/ablab/TandemTools", "html_url": "https://rseng.github.io/software/repository/github/ablab/TandemTools", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/TandemTools"}, {"uid": "github/ablab/nerpa", "html_url": "https://rseng.github.io/software/repository/github/ablab/nerpa", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/nerpa"}, {"uid": "github/ablab/spades", "html_url": "https://rseng.github.io/software/repository/github/ablab/spades", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/spades"}, {"uid": "github/ablab/quast", "html_url": "https://rseng.github.io/software/repository/github/ablab/quast", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/quast"}, {"uid": "github/SebOliver/PCA", "html_url": "https://rseng.github.io/software/repository/github/SebOliver/PCA", "api_url": "https://rseng.github.io/software/api/repos/github/SebOliver/PCA"}, {"uid": "github/cnes/EleFits", "html_url": "https://rseng.github.io/software/repository/github/cnes/EleFits", "api_url": "https://rseng.github.io/software/api/repos/github/cnes/EleFits"}, {"uid": "github/xragua/xraybinaryorbit", "html_url": "https://rseng.github.io/software/repository/github/xragua/xraybinaryorbit", "api_url": "https://rseng.github.io/software/api/repos/github/xragua/xraybinaryorbit"}, {"uid": "github/nand1155/CausNet", "html_url": "https://rseng.github.io/software/repository/github/nand1155/CausNet", "api_url": "https://rseng.github.io/software/api/repos/github/nand1155/CausNet"}, {"uid": "github/CDSP-SCPO/metadata-middleware", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/metadata-middleware", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/metadata-middleware"}, {"uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/WPSS-for-ESS-webpanel"}, {"uid": "github/CDSP-SCPO/dataverse-feed", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/dataverse-feed", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/dataverse-feed"}, {"uid": "github/KopalliV/Benchmarking_graph_pipelines", "html_url": "https://rseng.github.io/software/repository/github/KopalliV/Benchmarking_graph_pipelines", "api_url": "https://rseng.github.io/software/api/repos/github/KopalliV/Benchmarking_graph_pipelines"}, {"uid": "github/n8thangreen/BCEA", "html_url": "https://rseng.github.io/software/repository/github/n8thangreen/BCEA", "api_url": "https://rseng.github.io/software/api/repos/github/n8thangreen/BCEA"}, {"uid": "github/elliohow/fMRI_ROI_Analysis_Tool", "html_url": "https://rseng.github.io/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", "api_url": "https://rseng.github.io/software/api/repos/github/elliohow/fMRI_ROI_Analysis_Tool"}, {"uid": "github/big-data-lab-team/spot", "html_url": "https://rseng.github.io/software/repository/github/big-data-lab-team/spot", "api_url": "https://rseng.github.io/software/api/repos/github/big-data-lab-team/spot"}, {"uid": "github/hannorein/rebound", "html_url": "https://rseng.github.io/software/repository/github/hannorein/rebound", "api_url": "https://rseng.github.io/software/api/repos/github/hannorein/rebound"}, {"uid": "github/natir/vcf2parquet", "html_url": "https://rseng.github.io/software/repository/github/natir/vcf2parquet", "api_url": "https://rseng.github.io/software/api/repos/github/natir/vcf2parquet"}, {"uid": "github/natir/yacrd", "html_url": "https://rseng.github.io/software/repository/github/natir/yacrd", "api_url": "https://rseng.github.io/software/api/repos/github/natir/yacrd"}, {"uid": "github/natir/rustyread", "html_url": "https://rseng.github.io/software/repository/github/natir/rustyread", "api_url": "https://rseng.github.io/software/api/repos/github/natir/rustyread"}, {"uid": "github/ernewton/tellrv", "html_url": "https://rseng.github.io/software/repository/github/ernewton/tellrv", "api_url": "https://rseng.github.io/software/api/repos/github/ernewton/tellrv"}, {"uid": "github/mofanv/darknetz", "html_url": "https://rseng.github.io/software/repository/github/mofanv/darknetz", "api_url": "https://rseng.github.io/software/api/repos/github/mofanv/darknetz"}, {"uid": "github/Oftatkofta/cellocity", "html_url": "https://rseng.github.io/software/repository/github/Oftatkofta/cellocity", "api_url": "https://rseng.github.io/software/api/repos/github/Oftatkofta/cellocity"}, {"uid": "github/savage13/sacio", "html_url": "https://rseng.github.io/software/repository/github/savage13/sacio", "api_url": "https://rseng.github.io/software/api/repos/github/savage13/sacio"}, {"uid": "github/dcouvin/CRISPRCasFinder", "html_url": "https://rseng.github.io/software/repository/github/dcouvin/CRISPRCasFinder", "api_url": "https://rseng.github.io/software/api/repos/github/dcouvin/CRISPRCasFinder"}, {"uid": "github/simpeg/aurora", "html_url": "https://rseng.github.io/software/repository/github/simpeg/aurora", "api_url": "https://rseng.github.io/software/api/repos/github/simpeg/aurora"}, {"uid": "github/MiguelEA/nudec_BSM", "html_url": "https://rseng.github.io/software/repository/github/MiguelEA/nudec_BSM", "api_url": "https://rseng.github.io/software/api/repos/github/MiguelEA/nudec_BSM"}, {"uid": "github/clwainwright/CosmoTransitions", "html_url": "https://rseng.github.io/software/repository/github/clwainwright/CosmoTransitions", "api_url": "https://rseng.github.io/software/api/repos/github/clwainwright/CosmoTransitions"}, {"uid": "github/andymummeryastro/tidalspin", "html_url": "https://rseng.github.io/software/repository/github/andymummeryastro/tidalspin", "api_url": "https://rseng.github.io/software/api/repos/github/andymummeryastro/tidalspin"}, {"uid": "github/cgrudz/DataAssimilationBenchmarks.jl", "html_url": "https://rseng.github.io/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/cgrudz/DataAssimilationBenchmarks.jl"}, {"uid": "github/langfzac/Photodynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/langfzac/Photodynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/langfzac/Photodynamics.jl"}, {"uid": "github/maxpumperla/hyperas", "html_url": "https://rseng.github.io/software/repository/github/maxpumperla/hyperas", "api_url": "https://rseng.github.io/software/api/repos/github/maxpumperla/hyperas"}, {"uid": "github/astronomyk/SimCADO", "html_url": "https://rseng.github.io/software/repository/github/astronomyk/SimCADO", "api_url": "https://rseng.github.io/software/api/repos/github/astronomyk/SimCADO"}, {"uid": "github/IMS-MAXIMS/openMAXIMS", "html_url": "https://rseng.github.io/software/repository/github/IMS-MAXIMS/openMAXIMS", "api_url": "https://rseng.github.io/software/api/repos/github/IMS-MAXIMS/openMAXIMS"}, {"uid": "github/wjakethompson/measr", "html_url": "https://rseng.github.io/software/repository/github/wjakethompson/measr", "api_url": "https://rseng.github.io/software/api/repos/github/wjakethompson/measr"}, {"uid": "github/jeaadams/ExoPix", "html_url": "https://rseng.github.io/software/repository/github/jeaadams/ExoPix", "api_url": "https://rseng.github.io/software/api/repos/github/jeaadams/ExoPix"}, {"uid": "github/yuansliu/minirmd", "html_url": "https://rseng.github.io/software/repository/github/yuansliu/minirmd", "api_url": "https://rseng.github.io/software/api/repos/github/yuansliu/minirmd"}, {"uid": "github/dokkum/maskfill", "html_url": "https://rseng.github.io/software/repository/github/dokkum/maskfill", "api_url": "https://rseng.github.io/software/api/repos/github/dokkum/maskfill"}, {"uid": "github/pelahi/TreeFrog", "html_url": "https://rseng.github.io/software/repository/github/pelahi/TreeFrog", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/TreeFrog"}, {"uid": "github/pelahi/VELOCIraptor-STF", "html_url": "https://rseng.github.io/software/repository/github/pelahi/VELOCIraptor-STF", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/VELOCIraptor-STF"}, {"uid": "github/BioDepot/biodepot-launcher", "html_url": "https://rseng.github.io/software/repository/github/BioDepot/biodepot-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/BioDepot/biodepot-launcher"}, {"uid": "github/DrSoulain/PREVIS", "html_url": "https://rseng.github.io/software/repository/github/DrSoulain/PREVIS", "api_url": "https://rseng.github.io/software/api/repos/github/DrSoulain/PREVIS"}, {"uid": "github/y-256/libdivsufsort", "html_url": "https://rseng.github.io/software/repository/github/y-256/libdivsufsort", "api_url": "https://rseng.github.io/software/api/repos/github/y-256/libdivsufsort"}, {"uid": "github/eead-csic-compbio/get_homologues", "html_url": "https://rseng.github.io/software/repository/github/eead-csic-compbio/get_homologues", "api_url": "https://rseng.github.io/software/api/repos/github/eead-csic-compbio/get_homologues"}, {"uid": "github/WorkflowConversion/CTDConverter", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDConverter", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDConverter"}, {"uid": "github/WorkflowConversion/CTDopts", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDopts", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDopts"}, {"uid": "github/ocxtal/minialign", "html_url": "https://rseng.github.io/software/repository/github/ocxtal/minialign", "api_url": "https://rseng.github.io/software/api/repos/github/ocxtal/minialign"}, {"uid": "github/beckrob/Photo-z-SQL", "html_url": "https://rseng.github.io/software/repository/github/beckrob/Photo-z-SQL", "api_url": "https://rseng.github.io/software/api/repos/github/beckrob/Photo-z-SQL"}, {"uid": "github/FRBs/FRB", "html_url": "https://rseng.github.io/software/repository/github/FRBs/FRB", "api_url": "https://rseng.github.io/software/api/repos/github/FRBs/FRB"}, {"uid": "github/firedrakeproject/firedrake", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/firedrake", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/firedrake"}, {"uid": "github/firedrakeproject/checkpoint_schedules", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/checkpoint_schedules", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/checkpoint_schedules"}, {"uid": "github/firedrakeproject/gusto", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/gusto", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/gusto"}, {"uid": "github/tne-lab/py-behav-box-v2", "html_url": "https://rseng.github.io/software/repository/github/tne-lab/py-behav-box-v2", "api_url": "https://rseng.github.io/software/api/repos/github/tne-lab/py-behav-box-v2"}, {"uid": "github/galizia-lab/pyview", "html_url": "https://rseng.github.io/software/repository/github/galizia-lab/pyview", "api_url": "https://rseng.github.io/software/api/repos/github/galizia-lab/pyview"}, {"uid": "github/HoBeZwe/SphericalScattering.jl", "html_url": "https://rseng.github.io/software/repository/github/HoBeZwe/SphericalScattering.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HoBeZwe/SphericalScattering.jl"}, {"uid": "github/amkrajewski/nimCSO", "html_url": "https://rseng.github.io/software/repository/github/amkrajewski/nimCSO", "api_url": "https://rseng.github.io/software/api/repos/github/amkrajewski/nimCSO"}, {"uid": "github/bjmt/universalmotif", "html_url": "https://rseng.github.io/software/repository/github/bjmt/universalmotif", "api_url": "https://rseng.github.io/software/api/repos/github/bjmt/universalmotif"}, {"uid": "github/mcgalcode/pylattica", "html_url": "https://rseng.github.io/software/repository/github/mcgalcode/pylattica", "api_url": "https://rseng.github.io/software/api/repos/github/mcgalcode/pylattica"}, {"uid": "github/McMahonCosmologyGroup/holosim-ml", "html_url": "https://rseng.github.io/software/repository/github/McMahonCosmologyGroup/holosim-ml", "api_url": "https://rseng.github.io/software/api/repos/github/McMahonCosmologyGroup/holosim-ml"}, {"uid": "github/ucberkeleyseti/turbo_seti", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/turbo_seti", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/turbo_seti"}, {"uid": "github/ucberkeleyseti/blimpy", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/blimpy", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/blimpy"}, {"uid": "github/xychcz/S3Fit", "html_url": "https://rseng.github.io/software/repository/github/xychcz/S3Fit", "api_url": "https://rseng.github.io/software/api/repos/github/xychcz/S3Fit"}, {"uid": "github/coleygroup/pyscreener", "html_url": "https://rseng.github.io/software/repository/github/coleygroup/pyscreener", "api_url": "https://rseng.github.io/software/api/repos/github/coleygroup/pyscreener"}, {"uid": "github/yiling0210/APIR", "html_url": "https://rseng.github.io/software/repository/github/yiling0210/APIR", "api_url": "https://rseng.github.io/software/api/repos/github/yiling0210/APIR"}, {"uid": "github/sintefore/TimeStruct.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefore/TimeStruct.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefore/TimeStruct.jl"}, {"uid": "github/fulcrumgenomics/fgbio", "html_url": "https://rseng.github.io/software/repository/github/fulcrumgenomics/fgbio", "api_url": "https://rseng.github.io/software/api/repos/github/fulcrumgenomics/fgbio"}, {"uid": "github/mosdef-hub/mbuild", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/mbuild", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/mbuild"}, {"uid": "github/mosdef-hub/foyer", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/foyer", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/foyer"}, {"uid": "github/pmelchior/des-exp-checker", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/des-exp-checker", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/des-exp-checker"}, {"uid": "github/pmelchior/shapelens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shapelens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shapelens"}, {"uid": "github/pmelchior/scarlet", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/scarlet", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/scarlet"}, {"uid": "github/pmelchior/skymapper", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skymapper", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skymapper"}, {"uid": "github/pmelchior/shear-stacking", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shear-stacking", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shear-stacking"}, {"uid": "github/pmelchior/skylens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skylens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skylens"}, {"uid": "github/pmelchior/epsnoise", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/epsnoise", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/epsnoise"}, {"uid": "github/pmelchior/pyGMMis", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/pyGMMis", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/pyGMMis"}, {"uid": "github/pmelchior/spender", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/spender", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/spender"}, {"uid": "github/EACcodes/TigerCI", "html_url": "https://rseng.github.io/software/repository/github/EACcodes/TigerCI", "api_url": "https://rseng.github.io/software/api/repos/github/EACcodes/TigerCI"}, {"uid": "github/APGG-Lab/APGG", "html_url": "https://rseng.github.io/software/repository/github/APGG-Lab/APGG", "api_url": "https://rseng.github.io/software/api/repos/github/APGG-Lab/APGG"}, {"uid": "github/jacksund/simmate", "html_url": "https://rseng.github.io/software/repository/github/jacksund/simmate", "api_url": "https://rseng.github.io/software/api/repos/github/jacksund/simmate"}, {"uid": "github/CalumHawcroft/Starburst", "html_url": "https://rseng.github.io/software/repository/github/CalumHawcroft/Starburst", "api_url": "https://rseng.github.io/software/api/repos/github/CalumHawcroft/Starburst"}, {"uid": "github/SunilAnandatheertha/PXO", "html_url": "https://rseng.github.io/software/repository/github/SunilAnandatheertha/PXO", "api_url": "https://rseng.github.io/software/api/repos/github/SunilAnandatheertha/PXO"}, {"uid": "github/zenitani/OpenMHD", "html_url": "https://rseng.github.io/software/repository/github/zenitani/OpenMHD", "api_url": "https://rseng.github.io/software/api/repos/github/zenitani/OpenMHD"}, {"uid": "github/Rnazx/Scaling-Relations", "html_url": "https://rseng.github.io/software/repository/github/Rnazx/Scaling-Relations", "api_url": "https://rseng.github.io/software/api/repos/github/Rnazx/Scaling-Relations"}, {"uid": "github/WaterFutures/EPyT-Flow", "html_url": "https://rseng.github.io/software/repository/github/WaterFutures/EPyT-Flow", "api_url": "https://rseng.github.io/software/api/repos/github/WaterFutures/EPyT-Flow"}, {"uid": "github/flexible-atomic-code/fac", "html_url": "https://rseng.github.io/software/repository/github/flexible-atomic-code/fac", "api_url": "https://rseng.github.io/software/api/repos/github/flexible-atomic-code/fac"}, {"uid": "github/GenomicParisCentre/toulligQC", "html_url": "https://rseng.github.io/software/repository/github/GenomicParisCentre/toulligQC", "api_url": "https://rseng.github.io/software/api/repos/github/GenomicParisCentre/toulligQC"}, {"uid": "github/NickMilsonPhysics/BinaryStarSolver", "html_url": "https://rseng.github.io/software/repository/github/NickMilsonPhysics/BinaryStarSolver", "api_url": "https://rseng.github.io/software/api/repos/github/NickMilsonPhysics/BinaryStarSolver"}, {"uid": "github/soylentdeen/MoogStokes", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/MoogStokes", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/MoogStokes"}, {"uid": "github/soylentdeen/CounterPoint", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/CounterPoint", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/CounterPoint"}, {"uid": "github/snowformatics/macrobot", "html_url": "https://rseng.github.io/software/repository/github/snowformatics/macrobot", "api_url": "https://rseng.github.io/software/api/repos/github/snowformatics/macrobot"}, {"uid": "github/cnsetzer/kilopop", "html_url": "https://rseng.github.io/software/repository/github/cnsetzer/kilopop", "api_url": "https://rseng.github.io/software/api/repos/github/cnsetzer/kilopop"}, {"uid": "github/coder/code-server", "html_url": "https://rseng.github.io/software/repository/github/coder/code-server", "api_url": "https://rseng.github.io/software/api/repos/github/coder/code-server"}, {"uid": "github/youngjookim/sdr", "html_url": "https://rseng.github.io/software/repository/github/youngjookim/sdr", "api_url": "https://rseng.github.io/software/api/repos/github/youngjookim/sdr"}, {"uid": "github/DICP1810/ComMap", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/ComMap", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/ComMap"}, {"uid": "github/DICP1810/SpotLink", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/SpotLink", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/SpotLink"}, {"uid": "github/sebhoof/SolarAxionFlux", "html_url": "https://rseng.github.io/software/repository/github/sebhoof/SolarAxionFlux", "api_url": "https://rseng.github.io/software/api/repos/github/sebhoof/SolarAxionFlux"}, {"uid": "github/NorwegianVeterinaryInstitute/ALPPACA", "html_url": "https://rseng.github.io/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", "api_url": "https://rseng.github.io/software/api/repos/github/NorwegianVeterinaryInstitute/ALPPACA"}, {"uid": "github/jimmink/argslab", "html_url": "https://rseng.github.io/software/repository/github/jimmink/argslab", "api_url": "https://rseng.github.io/software/api/repos/github/jimmink/argslab"}, {"uid": "github/nhurleywalker/fits_warp", "html_url": "https://rseng.github.io/software/repository/github/nhurleywalker/fits_warp", "api_url": "https://rseng.github.io/software/api/repos/github/nhurleywalker/fits_warp"}, {"uid": "github/bwvdnbro/CMacIonize", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/CMacIonize", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/CMacIonize"}, {"uid": "github/bwvdnbro/HydroCode1D", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/HydroCode1D", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/HydroCode1D"}, {"uid": "github/alexander-shen/rtest", "html_url": "https://rseng.github.io/software/repository/github/alexander-shen/rtest", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-shen/rtest"}, {"uid": "github/asancpt/caffsim", "html_url": "https://rseng.github.io/software/repository/github/asancpt/caffsim", "api_url": "https://rseng.github.io/software/api/repos/github/asancpt/caffsim"}, {"uid": "github/wen-jams/bsavi", "html_url": "https://rseng.github.io/software/repository/github/wen-jams/bsavi", "api_url": "https://rseng.github.io/software/api/repos/github/wen-jams/bsavi"}, {"uid": "github/LukeDuttweiler/skipTrack", "html_url": "https://rseng.github.io/software/repository/github/LukeDuttweiler/skipTrack", "api_url": "https://rseng.github.io/software/api/repos/github/LukeDuttweiler/skipTrack"}, {"uid": "github/multiscale/muscle3", "html_url": "https://rseng.github.io/software/repository/github/multiscale/muscle3", "api_url": "https://rseng.github.io/software/api/repos/github/multiscale/muscle3"}, {"uid": "github/AstroUGent/shadowfax", "html_url": "https://rseng.github.io/software/repository/github/AstroUGent/shadowfax", "api_url": "https://rseng.github.io/software/api/repos/github/AstroUGent/shadowfax"}, {"uid": "github/Yunzheng168/PANCAKE", "html_url": "https://rseng.github.io/software/repository/github/Yunzheng168/PANCAKE", "api_url": "https://rseng.github.io/software/api/repos/github/Yunzheng168/PANCAKE"}, {"uid": "github/lemene/PECAT", "html_url": "https://rseng.github.io/software/repository/github/lemene/PECAT", "api_url": "https://rseng.github.io/software/api/repos/github/lemene/PECAT"}, {"uid": "github/Martindelosrios/cosmic-kite", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/cosmic-kite", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/cosmic-kite"}, {"uid": "github/Martindelosrios/ROGER", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/ROGER", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/ROGER"}, {"uid": "github/Martindelosrios/MeSsI", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/MeSsI", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/MeSsI"}, {"uid": "github/fatmasevinck/enetLTS", "html_url": "https://rseng.github.io/software/repository/github/fatmasevinck/enetLTS", "api_url": "https://rseng.github.io/software/api/repos/github/fatmasevinck/enetLTS"}, {"uid": "github/esplint/IRACpm", "html_url": "https://rseng.github.io/software/repository/github/esplint/IRACpm", "api_url": "https://rseng.github.io/software/api/repos/github/esplint/IRACpm"}, {"uid": "github/cosmodesi/pycorr", "html_url": "https://rseng.github.io/software/repository/github/cosmodesi/pycorr", "api_url": "https://rseng.github.io/software/api/repos/github/cosmodesi/pycorr"}, {"uid": "github/mlysy/LocalCop", "html_url": "https://rseng.github.io/software/repository/github/mlysy/LocalCop", "api_url": "https://rseng.github.io/software/api/repos/github/mlysy/LocalCop"}, {"uid": "github/Materials-Consortia/OPTIMADE-Filter", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/OPTIMADE-Filter", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/OPTIMADE-Filter"}, {"uid": "github/Materials-Consortia/optimade-python-tools", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/optimade-python-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/optimade-python-tools"}, {"uid": "github/cersonsky-lab/AniSOAP", "html_url": "https://rseng.github.io/software/repository/github/cersonsky-lab/AniSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/cersonsky-lab/AniSOAP"}, {"uid": "github/mtceballos/SIRENAdoc", "html_url": "https://rseng.github.io/software/repository/github/mtceballos/SIRENAdoc", "api_url": "https://rseng.github.io/software/api/repos/github/mtceballos/SIRENAdoc"}, {"uid": "github/astrobrent/mappings", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/mappings", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/mappings"}, {"uid": "github/astrobrent/itera", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/itera", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/itera"}, {"uid": "github/galaxy001/pirs", "html_url": "https://rseng.github.io/software/repository/github/galaxy001/pirs", "api_url": "https://rseng.github.io/software/api/repos/github/galaxy001/pirs"}, {"uid": "github/Kushaalkumar-pothula/FLARE", "html_url": "https://rseng.github.io/software/repository/github/Kushaalkumar-pothula/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/Kushaalkumar-pothula/FLARE"}, {"uid": "github/pylops/pyproximal", "html_url": "https://rseng.github.io/software/repository/github/pylops/pyproximal", "api_url": "https://rseng.github.io/software/api/repos/github/pylops/pyproximal"}, {"uid": "github/openscm/openscm-twolayermodel", "html_url": "https://rseng.github.io/software/repository/github/openscm/openscm-twolayermodel", "api_url": "https://rseng.github.io/software/api/repos/github/openscm/openscm-twolayermodel"}, {"uid": "github/dirmeier/surjectors", "html_url": "https://rseng.github.io/software/repository/github/dirmeier/surjectors", "api_url": "https://rseng.github.io/software/api/repos/github/dirmeier/surjectors"}, {"uid": "github/lnasellentin/DALI", "html_url": "https://rseng.github.io/software/repository/github/lnasellentin/DALI", "api_url": "https://rseng.github.io/software/api/repos/github/lnasellentin/DALI"}, {"uid": "github/scipy/scipy", "html_url": "https://rseng.github.io/software/repository/github/scipy/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/scipy/scipy"}, {"uid": "github/spacepy/spacepy", "html_url": "https://rseng.github.io/software/repository/github/spacepy/spacepy", "api_url": "https://rseng.github.io/software/api/repos/github/spacepy/spacepy"}, {"uid": "github/alexlewin24/BLSEM", "html_url": "https://rseng.github.io/software/repository/github/alexlewin24/BLSEM", "api_url": "https://rseng.github.io/software/api/repos/github/alexlewin24/BLSEM"}, {"uid": "github/huanghua1994/HiGP", "html_url": "https://rseng.github.io/software/repository/github/huanghua1994/HiGP", "api_url": "https://rseng.github.io/software/api/repos/github/huanghua1994/HiGP"}, {"uid": "github/sylabs/singularity", "html_url": "https://rseng.github.io/software/repository/github/sylabs/singularity", "api_url": "https://rseng.github.io/software/api/repos/github/sylabs/singularity"}, {"uid": "github/PDBeurope/pdb-images", "html_url": "https://rseng.github.io/software/repository/github/PDBeurope/pdb-images", "api_url": "https://rseng.github.io/software/api/repos/github/PDBeurope/pdb-images"}, {"uid": "github/OpenHPS/openhps-core", "html_url": "https://rseng.github.io/software/repository/github/OpenHPS/openhps-core", "api_url": "https://rseng.github.io/software/api/repos/github/OpenHPS/openhps-core"}, {"uid": "github/CITCOM-project/CausalTestingFramework", "html_url": "https://rseng.github.io/software/repository/github/CITCOM-project/CausalTestingFramework", "api_url": "https://rseng.github.io/software/api/repos/github/CITCOM-project/CausalTestingFramework"}, {"uid": "github/FabioRigamonti/pyADfit", "html_url": "https://rseng.github.io/software/repository/github/FabioRigamonti/pyADfit", "api_url": "https://rseng.github.io/software/api/repos/github/FabioRigamonti/pyADfit"}, {"uid": "github/GENtle-persons/gentle-m", "html_url": "https://rseng.github.io/software/repository/github/GENtle-persons/gentle-m", "api_url": "https://rseng.github.io/software/api/repos/github/GENtle-persons/gentle-m"}, {"uid": "github/s2mLab/pyScienceMode", "html_url": "https://rseng.github.io/software/repository/github/s2mLab/pyScienceMode", "api_url": "https://rseng.github.io/software/api/repos/github/s2mLab/pyScienceMode"}, {"uid": "github/sarrvesh/cuFFS", "html_url": "https://rseng.github.io/software/repository/github/sarrvesh/cuFFS", "api_url": "https://rseng.github.io/software/api/repos/github/sarrvesh/cuFFS"}, {"uid": "github/vojtech-sidorin/quickclump", "html_url": "https://rseng.github.io/software/repository/github/vojtech-sidorin/quickclump", "api_url": "https://rseng.github.io/software/api/repos/github/vojtech-sidorin/quickclump"}, {"uid": "github/changhoonhahn/pySpectrum", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/pySpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/pySpectrum"}, {"uid": "github/changhoonhahn/haloflow", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/haloflow"}, {"uid": "github/changhoonhahn/provabgs", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/provabgs", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/provabgs"}, {"uid": "github/lxvm/AutoBZ.jl", "html_url": "https://rseng.github.io/software/repository/github/lxvm/AutoBZ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lxvm/AutoBZ.jl"}, {"uid": "github/hjens/lasso_spectra", "html_url": "https://rseng.github.io/software/repository/github/hjens/lasso_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/hjens/lasso_spectra"}, {"uid": "github/tud-hri/travia", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/travia", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/travia"}, {"uid": "github/tud-hri/joan", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/joan", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/joan"}, {"uid": "github/sterinaldi/FIGARO", "html_url": "https://rseng.github.io/software/repository/github/sterinaldi/FIGARO", "api_url": "https://rseng.github.io/software/api/repos/github/sterinaldi/FIGARO"}, {"uid": "github/micbia/SubgridClumping", "html_url": "https://rseng.github.io/software/repository/github/micbia/SubgridClumping", "api_url": "https://rseng.github.io/software/api/repos/github/micbia/SubgridClumping"}, {"uid": "github/jveitchmichaelis/pygadgetreader", "html_url": "https://rseng.github.io/software/repository/github/jveitchmichaelis/pygadgetreader", "api_url": "https://rseng.github.io/software/api/repos/github/jveitchmichaelis/pygadgetreader"}, {"uid": "github/QuackenbushLab/NetworkDataCompanion", "html_url": "https://rseng.github.io/software/repository/github/QuackenbushLab/NetworkDataCompanion", "api_url": "https://rseng.github.io/software/api/repos/github/QuackenbushLab/NetworkDataCompanion"}, {"uid": "github/pnnl/interflow", "html_url": "https://rseng.github.io/software/repository/github/pnnl/interflow", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/interflow"}, {"uid": "github/pnnl/HyperNetX", "html_url": "https://rseng.github.io/software/repository/github/pnnl/HyperNetX", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/HyperNetX"}, {"uid": "github/robashaw/libecpint", "html_url": "https://rseng.github.io/software/repository/github/robashaw/libecpint", "api_url": "https://rseng.github.io/software/api/repos/github/robashaw/libecpint"}, {"uid": "github/prashjet/popkinmocks", "html_url": "https://rseng.github.io/software/repository/github/prashjet/popkinmocks", "api_url": "https://rseng.github.io/software/api/repos/github/prashjet/popkinmocks"}, {"uid": "github/Narayana-Rao/SAR-tools", "html_url": "https://rseng.github.io/software/repository/github/Narayana-Rao/SAR-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Narayana-Rao/SAR-tools"}, {"uid": "github/PimenoffV/biotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/biotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/biotic"}, {"uid": "github/PimenoffV/VIBE", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/VIBE", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/VIBE"}, {"uid": "github/PimenoffV/Abiotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/Abiotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/Abiotic"}, {"uid": "github/U-Alberta/ADaPT-ML", "html_url": "https://rseng.github.io/software/repository/github/U-Alberta/ADaPT-ML", "api_url": "https://rseng.github.io/software/api/repos/github/U-Alberta/ADaPT-ML"}, {"uid": "github/casacore/casacore", "html_url": "https://rseng.github.io/software/repository/github/casacore/casacore", "api_url": "https://rseng.github.io/software/api/repos/github/casacore/casacore"}, {"uid": "github/EESI/Complet-Plus", "html_url": "https://rseng.github.io/software/repository/github/EESI/Complet-Plus", "api_url": "https://rseng.github.io/software/api/repos/github/EESI/Complet-Plus"}, {"uid": "github/navasmontilla/CAELUM", "html_url": "https://rseng.github.io/software/repository/github/navasmontilla/CAELUM", "api_url": "https://rseng.github.io/software/api/repos/github/navasmontilla/CAELUM"}, {"uid": "github/rsnemmen/BCES", "html_url": "https://rseng.github.io/software/repository/github/rsnemmen/BCES", "api_url": "https://rseng.github.io/software/api/repos/github/rsnemmen/BCES"}, {"uid": "github/Parsl/parsl", "html_url": "https://rseng.github.io/software/repository/github/Parsl/parsl", "api_url": "https://rseng.github.io/software/api/repos/github/Parsl/parsl"}, {"uid": "github/iontorrent/TS", "html_url": "https://rseng.github.io/software/repository/github/iontorrent/TS", "api_url": "https://rseng.github.io/software/api/repos/github/iontorrent/TS"}, {"uid": "github/cc646201081/CircSI-SSL", "html_url": "https://rseng.github.io/software/repository/github/cc646201081/CircSI-SSL", "api_url": "https://rseng.github.io/software/api/repos/github/cc646201081/CircSI-SSL"}, {"uid": "github/grazianoucci/game", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/game", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/game"}, {"uid": "github/grazianoucci/cosmic_variance", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/cosmic_variance", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/cosmic_variance"}, {"uid": "github/aritrachakrabarty/GPS", "html_url": "https://rseng.github.io/software/repository/github/aritrachakrabarty/GPS", "api_url": "https://rseng.github.io/software/api/repos/github/aritrachakrabarty/GPS"}, {"uid": "github/Climdyn/qgs", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/qgs", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/qgs"}, {"uid": "github/Climdyn/auto-AUTO", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/auto-AUTO", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/auto-AUTO"}, {"uid": "github/tfwillems/HipSTR", "html_url": "https://rseng.github.io/software/repository/github/tfwillems/HipSTR", "api_url": "https://rseng.github.io/software/api/repos/github/tfwillems/HipSTR"}, {"uid": "github/USNavalResearchLaboratory/eispac", "html_url": "https://rseng.github.io/software/repository/github/USNavalResearchLaboratory/eispac", "api_url": "https://rseng.github.io/software/api/repos/github/USNavalResearchLaboratory/eispac"}, {"uid": "github/YeoLab/FLARE", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/FLARE"}, {"uid": "github/YeoLab/clipper", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/clipper", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/clipper"}, {"uid": "github/RemieJanssen/phylox", "html_url": "https://rseng.github.io/software/repository/github/RemieJanssen/phylox", "api_url": "https://rseng.github.io/software/api/repos/github/RemieJanssen/phylox"}, {"uid": "github/dewberryjanosz/polyrot", "html_url": "https://rseng.github.io/software/repository/github/dewberryjanosz/polyrot", "api_url": "https://rseng.github.io/software/api/repos/github/dewberryjanosz/polyrot"}, {"uid": "github/aviadpi/SparseBLS", "html_url": "https://rseng.github.io/software/repository/github/aviadpi/SparseBLS", "api_url": "https://rseng.github.io/software/api/repos/github/aviadpi/SparseBLS"}, {"uid": "github/mirnylab/cooler", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/cooler", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/cooler"}, {"uid": "github/mirnylab/pairtools", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/pairtools"}, {"uid": "github/discsim/frank", "html_url": "https://rseng.github.io/software/repository/github/discsim/frank", "api_url": "https://rseng.github.io/software/api/repos/github/discsim/frank"}, {"uid": "github/sdrastro/NWelch", "html_url": "https://rseng.github.io/software/repository/github/sdrastro/NWelch", "api_url": "https://rseng.github.io/software/api/repos/github/sdrastro/NWelch"}, {"uid": "github/DrDaveShaw/INCHEM-Py", "html_url": "https://rseng.github.io/software/repository/github/DrDaveShaw/INCHEM-Py", "api_url": "https://rseng.github.io/software/api/repos/github/DrDaveShaw/INCHEM-Py"}, {"uid": "github/abschneider/StrainHub", "html_url": "https://rseng.github.io/software/repository/github/abschneider/StrainHub", "api_url": "https://rseng.github.io/software/api/repos/github/abschneider/StrainHub"}, {"uid": "github/MESAHub/mesa", "html_url": "https://rseng.github.io/software/repository/github/MESAHub/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/MESAHub/mesa"}, {"uid": "github/mne-tools/mne-python", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-python", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-python"}, {"uid": "github/mne-tools/mne-icalabel", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-icalabel", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-icalabel"}, {"uid": "github/mne-tools/mne-lsl", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-lsl", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-lsl"}, {"uid": "github/ZjuLiangsl/mmkp", "html_url": "https://rseng.github.io/software/repository/github/ZjuLiangsl/mmkp", "api_url": "https://rseng.github.io/software/api/repos/github/ZjuLiangsl/mmkp"}, {"uid": "github/tornede/py_experimenter", "html_url": "https://rseng.github.io/software/repository/github/tornede/py_experimenter", "api_url": "https://rseng.github.io/software/api/repos/github/tornede/py_experimenter"}, {"uid": "github/mfem/mfem", "html_url": "https://rseng.github.io/software/repository/github/mfem/mfem", "api_url": "https://rseng.github.io/software/api/repos/github/mfem/mfem"}, {"uid": "github/berenslab/MorphoPy", "html_url": "https://rseng.github.io/software/repository/github/berenslab/MorphoPy", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/MorphoPy"}, {"uid": "github/berenslab/fundus_image_toolbox", "html_url": "https://rseng.github.io/software/repository/github/berenslab/fundus_image_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/fundus_image_toolbox"}, {"uid": "github/theGreatHerrLebert/rustims", "html_url": "https://rseng.github.io/software/repository/github/theGreatHerrLebert/rustims", "api_url": "https://rseng.github.io/software/api/repos/github/theGreatHerrLebert/rustims"}, {"uid": "github/danielkoll/tidally-locked-coordinates", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/tidally-locked-coordinates", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/tidally-locked-coordinates"}, {"uid": "github/danielkoll/PyRADS", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/PyRADS", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/PyRADS"}, {"uid": "github/freesurfer/freesurfer", "html_url": "https://rseng.github.io/software/repository/github/freesurfer/freesurfer", "api_url": "https://rseng.github.io/software/api/repos/github/freesurfer/freesurfer"}, {"uid": "github/ImperialCollegeLondon/pytest_template_application", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/pytest_template_application", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/pytest_template_application"}, {"uid": "github/ImperialCollegeLondon/champ", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/champ", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/champ"}, {"uid": "github/ImperialCollegeLondon/sap-voicebox", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sap-voicebox", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sap-voicebox"}, {"uid": "github/ImperialCollegeLondon/hcga", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/hcga", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/hcga"}, {"uid": "github/ImperialCollegeLondon/SWMManywhere", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/SWMManywhere", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/SWMManywhere"}, {"uid": "github/ImperialCollegeLondon/ICLOCS", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/ICLOCS", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/ICLOCS"}, {"uid": "github/ImperialCollegeLondon/UVLM", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/UVLM", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/UVLM"}, {"uid": "github/ImperialCollegeLondon/safedata", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/safedata", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/safedata"}, {"uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs_cluster_scripts"}, {"uid": "github/ImperialCollegeLondon/fractalgenetics", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/fractalgenetics", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/fractalgenetics"}, {"uid": "github/ImperialCollegeLondon/research-software-directory-data", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/research-software-directory-data", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/research-software-directory-data"}, {"uid": "github/ImperialCollegeLondon/R2T2", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/R2T2", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/R2T2"}, {"uid": "github/ImperialCollegeLondon/covid19model", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/covid19model", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/covid19model"}, {"uid": "github/ImperialCollegeLondon/sharpy", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sharpy", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sharpy"}, {"uid": "github/ImperialCollegeLondon/magda_tools", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/magda_tools", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/magda_tools"}, {"uid": "github/ImperialCollegeLondon/epidemia", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/epidemia", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/epidemia"}, {"uid": "github/ImperialCollegeLondon/rcs-pacemakers", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs-pacemakers"}, {"uid": "github/ImperialCollegeLondon/django-drf-filepond", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/django-drf-filepond", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/django-drf-filepond"}, {"uid": "github/ImperialCollegeLondon/WInc3D", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/WInc3D", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/WInc3D"}, {"uid": "github/ImperialCollegeLondon/adam", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/adam", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/adam"}, {"uid": "github/ImperialCollegeLondon/EpiCollectplus", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/EpiCollectplus", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/EpiCollectplus"}, {"uid": "github/ImperialCollegeLondon/PyProBE", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/PyProBE", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/PyProBE"}, {"uid": "github/agnetelundgaard/BALDR", "html_url": "https://rseng.github.io/software/repository/github/agnetelundgaard/BALDR", "api_url": "https://rseng.github.io/software/api/repos/github/agnetelundgaard/BALDR"}, {"uid": "github/barbagroup/geoclaw-landspill", "html_url": "https://rseng.github.io/software/repository/github/barbagroup/geoclaw-landspill", "api_url": "https://rseng.github.io/software/api/repos/github/barbagroup/geoclaw-landspill"}, {"uid": "github/parallelwindfarms/byteparsing", "html_url": "https://rseng.github.io/software/repository/github/parallelwindfarms/byteparsing", "api_url": "https://rseng.github.io/software/api/repos/github/parallelwindfarms/byteparsing"}, {"uid": "github/dvallesp/vortex-p", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex-p", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex-p"}, {"uid": "github/dvallesp/asohf", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/asohf", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/asohf"}, {"uid": "github/dvallesp/vortex", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex"}, {"uid": "github/mourisl/Lighter", "html_url": "https://rseng.github.io/software/repository/github/mourisl/Lighter", "api_url": "https://rseng.github.io/software/api/repos/github/mourisl/Lighter"}, {"uid": "github/pmlmodelling/nctoolkit", "html_url": "https://rseng.github.io/software/repository/github/pmlmodelling/nctoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/pmlmodelling/nctoolkit"}, {"uid": "github/aprsa/dips", "html_url": "https://rseng.github.io/software/repository/github/aprsa/dips", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/dips"}, {"uid": "github/aprsa/ebai", "html_url": "https://rseng.github.io/software/repository/github/aprsa/ebai", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/ebai"}, {"uid": "github/archaeo-pteryx/PowerSpecCovFFT", "html_url": "https://rseng.github.io/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", "api_url": "https://rseng.github.io/software/api/repos/github/archaeo-pteryx/PowerSpecCovFFT"}, {"uid": "github/vcflib/bio-vcf", "html_url": "https://rseng.github.io/software/repository/github/vcflib/bio-vcf", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/bio-vcf"}, {"uid": "github/vcflib/vcflib", "html_url": "https://rseng.github.io/software/repository/github/vcflib/vcflib", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/vcflib"}, {"uid": "github/domeckert/pyproffit", "html_url": "https://rseng.github.io/software/repository/github/domeckert/pyproffit", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/pyproffit"}, {"uid": "github/domeckert/hydromass", "html_url": "https://rseng.github.io/software/repository/github/domeckert/hydromass", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/hydromass"}, {"uid": "github/domeckert/xmm_simulator", "html_url": "https://rseng.github.io/software/repository/github/domeckert/xmm_simulator", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/xmm_simulator"}, {"uid": "github/nvalimak/fsm-lite", "html_url": "https://rseng.github.io/software/repository/github/nvalimak/fsm-lite", "api_url": "https://rseng.github.io/software/api/repos/github/nvalimak/fsm-lite"}, {"uid": "github/connectomicslab/connectomemapper3", "html_url": "https://rseng.github.io/software/repository/github/connectomicslab/connectomemapper3", "api_url": "https://rseng.github.io/software/api/repos/github/connectomicslab/connectomemapper3"}, {"uid": "github/radicamc/exoTEDRF", "html_url": "https://rseng.github.io/software/repository/github/radicamc/exoTEDRF", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/exoTEDRF"}, {"uid": "github/radicamc/applesoss", "html_url": "https://rseng.github.io/software/repository/github/radicamc/applesoss", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/applesoss"}, {"uid": "github/FabrizioMusacchio/MotilA", "html_url": "https://rseng.github.io/software/repository/github/FabrizioMusacchio/MotilA", "api_url": "https://rseng.github.io/software/api/repos/github/FabrizioMusacchio/MotilA"}, {"uid": "github/BogdanCiambur/PROFILER", "html_url": "https://rseng.github.io/software/repository/github/BogdanCiambur/PROFILER", "api_url": "https://rseng.github.io/software/api/repos/github/BogdanCiambur/PROFILER"}, {"uid": "github/pengweixing/FACT", "html_url": "https://rseng.github.io/software/repository/github/pengweixing/FACT", "api_url": "https://rseng.github.io/software/api/repos/github/pengweixing/FACT"}, {"uid": "github/MSABuschmann/sledgehamr", "html_url": "https://rseng.github.io/software/repository/github/MSABuschmann/sledgehamr", "api_url": "https://rseng.github.io/software/api/repos/github/MSABuschmann/sledgehamr"}, {"uid": "github/BioMeCIS-Lab/OpenOmics", "html_url": "https://rseng.github.io/software/repository/github/BioMeCIS-Lab/OpenOmics", "api_url": "https://rseng.github.io/software/api/repos/github/BioMeCIS-Lab/OpenOmics"}, {"uid": "github/free1234hm/CLAM", "html_url": "https://rseng.github.io/software/repository/github/free1234hm/CLAM", "api_url": "https://rseng.github.io/software/api/repos/github/free1234hm/CLAM"}, {"uid": "github/elixir-europe/rdmkit", "html_url": "https://rseng.github.io/software/repository/github/elixir-europe/rdmkit", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-europe/rdmkit"}, {"uid": "github/dingyaozhang/Evitar", "html_url": "https://rseng.github.io/software/repository/github/dingyaozhang/Evitar", "api_url": "https://rseng.github.io/software/api/repos/github/dingyaozhang/Evitar"}, {"uid": "github/kidusasfaw/spatPomp", "html_url": "https://rseng.github.io/software/repository/github/kidusasfaw/spatPomp", "api_url": "https://rseng.github.io/software/api/repos/github/kidusasfaw/spatPomp"}, {"uid": "github/cbrueffer/tophat-recondition", "html_url": "https://rseng.github.io/software/repository/github/cbrueffer/tophat-recondition", "api_url": "https://rseng.github.io/software/api/repos/github/cbrueffer/tophat-recondition"}, {"uid": "github/pezmaster31/bamtools", "html_url": "https://rseng.github.io/software/repository/github/pezmaster31/bamtools", "api_url": "https://rseng.github.io/software/api/repos/github/pezmaster31/bamtools"}, {"uid": "github/eEcoLiDAR/Laserfarm", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/Laserfarm", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/Laserfarm"}, {"uid": "github/eEcoLiDAR/laserchicken", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/laserchicken", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/laserchicken"}, {"uid": "github/Azeret/galIMF", "html_url": "https://rseng.github.io/software/repository/github/Azeret/galIMF", "api_url": "https://rseng.github.io/software/api/repos/github/Azeret/galIMF"}, {"uid": "github/ICAMS/strucscan", "html_url": "https://rseng.github.io/software/repository/github/ICAMS/strucscan", "api_url": "https://rseng.github.io/software/api/repos/github/ICAMS/strucscan"}, {"uid": "github/heracles-ec/heracles", "html_url": "https://rseng.github.io/software/repository/github/heracles-ec/heracles", "api_url": "https://rseng.github.io/software/api/repos/github/heracles-ec/heracles"}, {"uid": "github/ianvcaldas/smalldisco", "html_url": "https://rseng.github.io/software/repository/github/ianvcaldas/smalldisco", "api_url": "https://rseng.github.io/software/api/repos/github/ianvcaldas/smalldisco"}, {"uid": "github/matteobachetti/TOAextractor", "html_url": "https://rseng.github.io/software/repository/github/matteobachetti/TOAextractor", "api_url": "https://rseng.github.io/software/api/repos/github/matteobachetti/TOAextractor"}, {"uid": "github/mbaes/SpheCow", "html_url": "https://rseng.github.io/software/repository/github/mbaes/SpheCow", "api_url": "https://rseng.github.io/software/api/repos/github/mbaes/SpheCow"}, {"uid": "github/ParkvilleData/MetaGenePipe", "html_url": "https://rseng.github.io/software/repository/github/ParkvilleData/MetaGenePipe", "api_url": "https://rseng.github.io/software/api/repos/github/ParkvilleData/MetaGenePipe"}, {"uid": "github/rvalieris/parallel-fastq-dump", "html_url": "https://rseng.github.io/software/repository/github/rvalieris/parallel-fastq-dump", "api_url": "https://rseng.github.io/software/api/repos/github/rvalieris/parallel-fastq-dump"}, {"uid": "github/MMV-Lab/mmv_im2im", "html_url": "https://rseng.github.io/software/repository/github/MMV-Lab/mmv_im2im", "api_url": "https://rseng.github.io/software/api/repos/github/MMV-Lab/mmv_im2im"}, {"uid": "github/thomaswilliamsastro/mcfine", "html_url": "https://rseng.github.io/software/repository/github/thomaswilliamsastro/mcfine", "api_url": "https://rseng.github.io/software/api/repos/github/thomaswilliamsastro/mcfine"}, {"uid": "github/lkreidberg/batman", "html_url": "https://rseng.github.io/software/repository/github/lkreidberg/batman", "api_url": "https://rseng.github.io/software/api/repos/github/lkreidberg/batman"}, {"uid": "github/AnkitBarik/planetMagFields", "html_url": "https://rseng.github.io/software/repository/github/AnkitBarik/planetMagFields", "api_url": "https://rseng.github.io/software/api/repos/github/AnkitBarik/planetMagFields"}, {"uid": "github/david-deboer/radiobear", "html_url": "https://rseng.github.io/software/repository/github/david-deboer/radiobear", "api_url": "https://rseng.github.io/software/api/repos/github/david-deboer/radiobear"}, {"uid": "github/nespinoza/mc-spam", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/mc-spam", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/mc-spam"}, {"uid": "github/nespinoza/limb-darkening", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/limb-darkening", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/limb-darkening"}, {"uid": "github/nespinoza/juliet", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/juliet", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/juliet"}, {"uid": "github/nespinoza/ld-exosim", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/ld-exosim", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/ld-exosim"}, {"uid": "github/nespinoza/exonailer", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/exonailer", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/exonailer"}, {"uid": "github/esandford/EightBitTransit", "html_url": "https://rseng.github.io/software/repository/github/esandford/EightBitTransit", "api_url": "https://rseng.github.io/software/api/repos/github/esandford/EightBitTransit"}, {"uid": "github/david-barnett/microViz", "html_url": "https://rseng.github.io/software/repository/github/david-barnett/microViz", "api_url": "https://rseng.github.io/software/api/repos/github/david-barnett/microViz"}, {"uid": "github/HannahMDoherty/ChemGAPP", "html_url": "https://rseng.github.io/software/repository/github/HannahMDoherty/ChemGAPP", "api_url": "https://rseng.github.io/software/api/repos/github/HannahMDoherty/ChemGAPP"}, {"uid": "github/ChemaPalencia/M_SMiLe", "html_url": "https://rseng.github.io/software/repository/github/ChemaPalencia/M_SMiLe", "api_url": "https://rseng.github.io/software/api/repos/github/ChemaPalencia/M_SMiLe"}, {"uid": "github/RTIP/artip", "html_url": "https://rseng.github.io/software/repository/github/RTIP/artip", "api_url": "https://rseng.github.io/software/api/repos/github/RTIP/artip"}, {"uid": "github/zheng-lh/UBER", "html_url": "https://rseng.github.io/software/repository/github/zheng-lh/UBER", "api_url": "https://rseng.github.io/software/api/repos/github/zheng-lh/UBER"}, {"uid": "github/rhenkin/visxhclust", "html_url": "https://rseng.github.io/software/repository/github/rhenkin/visxhclust", "api_url": "https://rseng.github.io/software/api/repos/github/rhenkin/visxhclust"}, {"uid": "github/HEML/HEML", "html_url": "https://rseng.github.io/software/repository/github/HEML/HEML", "api_url": "https://rseng.github.io/software/api/repos/github/HEML/HEML"}, {"uid": "github/amrex-astro/MAESTRO", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/MAESTRO", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/MAESTRO"}, {"uid": "github/amrex-astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Nyx"}, {"uid": "github/amrex-astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Castro"}, {"uid": "github/Glogobyte/miRGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Glogobyte/miRGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Glogobyte/miRGalaxy"}, {"uid": "github/daddeptr/Needlets", "html_url": "https://rseng.github.io/software/repository/github/daddeptr/Needlets", "api_url": "https://rseng.github.io/software/api/repos/github/daddeptr/Needlets"}, {"uid": "github/ewatercycle/era5cli", "html_url": "https://rseng.github.io/software/repository/github/ewatercycle/era5cli", "api_url": "https://rseng.github.io/software/api/repos/github/ewatercycle/era5cli"}, {"uid": "github/GBLille/MassiveFold", "html_url": "https://rseng.github.io/software/repository/github/GBLille/MassiveFold", "api_url": "https://rseng.github.io/software/api/repos/github/GBLille/MassiveFold"}, {"uid": "github/dominic-chang/Krang.jl", "html_url": "https://rseng.github.io/software/repository/github/dominic-chang/Krang.jl", "api_url": "https://rseng.github.io/software/api/repos/github/dominic-chang/Krang.jl"}, {"uid": "github/labcbb/SqueezeCall", "html_url": "https://rseng.github.io/software/repository/github/labcbb/SqueezeCall", "api_url": "https://rseng.github.io/software/api/repos/github/labcbb/SqueezeCall"}, {"uid": "github/zarr-developers/zarr-python", "html_url": "https://rseng.github.io/software/repository/github/zarr-developers/zarr-python", "api_url": "https://rseng.github.io/software/api/repos/github/zarr-developers/zarr-python"}, {"uid": "github/Cosmoglobe/zodipy", "html_url": "https://rseng.github.io/software/repository/github/Cosmoglobe/zodipy", "api_url": "https://rseng.github.io/software/api/repos/github/Cosmoglobe/zodipy"}, {"uid": "github/SPARC-X/SPARC-X-API", "html_url": "https://rseng.github.io/software/repository/github/SPARC-X/SPARC-X-API", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-X/SPARC-X-API"}, {"uid": "github/elnjensen/Tapir", "html_url": "https://rseng.github.io/software/repository/github/elnjensen/Tapir", "api_url": "https://rseng.github.io/software/api/repos/github/elnjensen/Tapir"}, {"uid": "github/smandal97/Sprout", "html_url": "https://rseng.github.io/software/repository/github/smandal97/Sprout", "api_url": "https://rseng.github.io/software/api/repos/github/smandal97/Sprout"}, {"uid": "github/paulmorio/gincco", "html_url": "https://rseng.github.io/software/repository/github/paulmorio/gincco", "api_url": "https://rseng.github.io/software/api/repos/github/paulmorio/gincco"}, {"uid": "github/kylemede/ExoSOFT", "html_url": "https://rseng.github.io/software/repository/github/kylemede/ExoSOFT", "api_url": "https://rseng.github.io/software/api/repos/github/kylemede/ExoSOFT"}, {"uid": "github/CaNS-World/CaNS-Fizzy", "html_url": "https://rseng.github.io/software/repository/github/CaNS-World/CaNS-Fizzy", "api_url": "https://rseng.github.io/software/api/repos/github/CaNS-World/CaNS-Fizzy"}, {"uid": "github/podondra/eidein", "html_url": "https://rseng.github.io/software/repository/github/podondra/eidein", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/eidein"}, {"uid": "github/podondra/bayesian-sznet", "html_url": "https://rseng.github.io/software/repository/github/podondra/bayesian-sznet", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/bayesian-sznet"}, {"uid": "github/dpryan79/MethylDackel", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/MethylDackel", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/MethylDackel"}, {"uid": "github/dpryan79/pyBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/pyBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/pyBigWig"}, {"uid": "github/dpryan79/libBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/libBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/libBigWig"}, {"uid": "github/RabadanLab/arcasHLA", "html_url": "https://rseng.github.io/software/repository/github/RabadanLab/arcasHLA", "api_url": "https://rseng.github.io/software/api/repos/github/RabadanLab/arcasHLA"}, {"uid": "github/TeamLEGWORK/LEGWORK", "html_url": "https://rseng.github.io/software/repository/github/TeamLEGWORK/LEGWORK", "api_url": "https://rseng.github.io/software/api/repos/github/TeamLEGWORK/LEGWORK"}, {"uid": "github/rehamelkholy/NutMaat", "html_url": "https://rseng.github.io/software/repository/github/rehamelkholy/NutMaat", "api_url": "https://rseng.github.io/software/api/repos/github/rehamelkholy/NutMaat"}, {"uid": "github/carrerajimenez/pyCatIndex", "html_url": "https://rseng.github.io/software/repository/github/carrerajimenez/pyCatIndex", "api_url": "https://rseng.github.io/software/api/repos/github/carrerajimenez/pyCatIndex"}, {"uid": "github/FreBio/komics", "html_url": "https://rseng.github.io/software/repository/github/FreBio/komics", "api_url": "https://rseng.github.io/software/api/repos/github/FreBio/komics"}, {"uid": "github/s-goldman/Dusty-Evolved-Star-Kit", "html_url": "https://rseng.github.io/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", "api_url": "https://rseng.github.io/software/api/repos/github/s-goldman/Dusty-Evolved-Star-Kit"}, {"uid": "github/sb-ncbr/golem", "html_url": "https://rseng.github.io/software/repository/github/sb-ncbr/golem", "api_url": "https://rseng.github.io/software/api/repos/github/sb-ncbr/golem"}, {"uid": "github/JoshSchramm94/validateHOT", "html_url": "https://rseng.github.io/software/repository/github/JoshSchramm94/validateHOT", "api_url": "https://rseng.github.io/software/api/repos/github/JoshSchramm94/validateHOT"}, {"uid": "github/hsso/crete", "html_url": "https://rseng.github.io/software/repository/github/hsso/crete", "api_url": "https://rseng.github.io/software/api/repos/github/hsso/crete"}, {"uid": "github/tBilby/tBilby", "html_url": "https://rseng.github.io/software/repository/github/tBilby/tBilby", "api_url": "https://rseng.github.io/software/api/repos/github/tBilby/tBilby"}, {"uid": "github/lab-medvedeva/GADES-main", "html_url": "https://rseng.github.io/software/repository/github/lab-medvedeva/GADES-main", "api_url": "https://rseng.github.io/software/api/repos/github/lab-medvedeva/GADES-main"}, {"uid": "github/rksyouyou/SASOM-analysis", "html_url": "https://rseng.github.io/software/repository/github/rksyouyou/SASOM-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/rksyouyou/SASOM-analysis"}, {"uid": "github/ks905383/xagg", "html_url": "https://rseng.github.io/software/repository/github/ks905383/xagg", "api_url": "https://rseng.github.io/software/api/repos/github/ks905383/xagg"}, {"uid": "github/Wytamma/snk", "html_url": "https://rseng.github.io/software/repository/github/Wytamma/snk", "api_url": "https://rseng.github.io/software/api/repos/github/Wytamma/snk"}, {"uid": "github/Dylan-Aliberti/Kepler-Collisions", "html_url": "https://rseng.github.io/software/repository/github/Dylan-Aliberti/Kepler-Collisions", "api_url": "https://rseng.github.io/software/api/repos/github/Dylan-Aliberti/Kepler-Collisions"}, {"uid": "github/danxhuber/galclassify", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/galclassify", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/galclassify"}, {"uid": "github/danxhuber/evolstate", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/evolstate", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/evolstate"}, {"uid": "github/GeneDx/scramble", "html_url": "https://rseng.github.io/software/repository/github/GeneDx/scramble", "api_url": "https://rseng.github.io/software/api/repos/github/GeneDx/scramble"}, {"uid": "github/tyo-nu/MINE-app", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/MINE-app", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/MINE-app"}, {"uid": "github/tyo-nu/pickaxe_paper", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/pickaxe_paper", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/pickaxe_paper"}, {"uid": "github/muctadir/lama", "html_url": "https://rseng.github.io/software/repository/github/muctadir/lama", "api_url": "https://rseng.github.io/software/api/repos/github/muctadir/lama"}, {"uid": "github/davidemms/OrthoFinder", "html_url": "https://rseng.github.io/software/repository/github/davidemms/OrthoFinder", "api_url": "https://rseng.github.io/software/api/repos/github/davidemms/OrthoFinder"}, {"uid": "github/Caltech-IPAC/Montage", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/Montage", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/Montage"}, {"uid": "github/Caltech-IPAC/kete", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/kete", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/kete"}, {"uid": "github/akashdhruv/BoxKit", "html_url": "https://rseng.github.io/software/repository/github/akashdhruv/BoxKit", "api_url": "https://rseng.github.io/software/api/repos/github/akashdhruv/BoxKit"}, {"uid": "github/llt1836/TE-HI-GCN", "html_url": "https://rseng.github.io/software/repository/github/llt1836/TE-HI-GCN", "api_url": "https://rseng.github.io/software/api/repos/github/llt1836/TE-HI-GCN"}, {"uid": "github/WangLabTHU/DeSP", "html_url": "https://rseng.github.io/software/repository/github/WangLabTHU/DeSP", "api_url": "https://rseng.github.io/software/api/repos/github/WangLabTHU/DeSP"}, {"uid": "github/bio-ontology-research-group/deepgoplus", "html_url": "https://rseng.github.io/software/repository/github/bio-ontology-research-group/deepgoplus", "api_url": "https://rseng.github.io/software/api/repos/github/bio-ontology-research-group/deepgoplus"}, {"uid": "github/A-Davies/LensCNN", "html_url": "https://rseng.github.io/software/repository/github/A-Davies/LensCNN", "api_url": "https://rseng.github.io/software/api/repos/github/A-Davies/LensCNN"}, {"uid": "github/grdspcht/ggret", "html_url": "https://rseng.github.io/software/repository/github/grdspcht/ggret", "api_url": "https://rseng.github.io/software/api/repos/github/grdspcht/ggret"}, {"uid": "github/pr2database/pr2-primers", "html_url": "https://rseng.github.io/software/repository/github/pr2database/pr2-primers", "api_url": "https://rseng.github.io/software/api/repos/github/pr2database/pr2-primers"}, {"uid": "github/SpaceML/GalaxyGAN", "html_url": "https://rseng.github.io/software/repository/github/SpaceML/GalaxyGAN", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceML/GalaxyGAN"}, {"uid": "github/SWIFTSIM/SOAP", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/SOAP", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/SOAP"}, {"uid": "github/SWIFTSIM/emulator", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/emulator", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/emulator"}, {"uid": "github/epruesse/SINA", "html_url": "https://rseng.github.io/software/repository/github/epruesse/SINA", "api_url": "https://rseng.github.io/software/api/repos/github/epruesse/SINA"}, {"uid": "github/li-yangyang/lotus", "html_url": "https://rseng.github.io/software/repository/github/li-yangyang/lotus", "api_url": "https://rseng.github.io/software/api/repos/github/li-yangyang/lotus"}, {"uid": "github/OPM/opm-simulators", "html_url": "https://rseng.github.io/software/repository/github/OPM/opm-simulators", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/opm-simulators"}, {"uid": "github/OPM/pyopmspe11", "html_url": "https://rseng.github.io/software/repository/github/OPM/pyopmspe11", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/pyopmspe11"}, {"uid": "github/bwa-mem2/bwa-mem2", "html_url": "https://rseng.github.io/software/repository/github/bwa-mem2/bwa-mem2", "api_url": "https://rseng.github.io/software/api/repos/github/bwa-mem2/bwa-mem2"}, {"uid": "github/stammler/dustpy", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpy", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpy"}, {"uid": "github/stammler/simframe", "html_url": "https://rseng.github.io/software/repository/github/stammler/simframe", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/simframe"}, {"uid": "github/stammler/dustpylib", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpylib", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpylib"}, {"uid": "github/nluetts/NoisySignalIntegration.jl", "html_url": "https://rseng.github.io/software/repository/github/nluetts/NoisySignalIntegration.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nluetts/NoisySignalIntegration.jl"}, {"uid": "github/DingshanDeng/ysoisochrone", "html_url": "https://rseng.github.io/software/repository/github/DingshanDeng/ysoisochrone", "api_url": "https://rseng.github.io/software/api/repos/github/DingshanDeng/ysoisochrone"}, {"uid": "github/WilsonGregory/ginjax", "html_url": "https://rseng.github.io/software/repository/github/WilsonGregory/ginjax", "api_url": "https://rseng.github.io/software/api/repos/github/WilsonGregory/ginjax"}, {"uid": "github/mauropieroni/fastpta", "html_url": "https://rseng.github.io/software/repository/github/mauropieroni/fastpta", "api_url": "https://rseng.github.io/software/api/repos/github/mauropieroni/fastpta"}, {"uid": "github/brian-team/brian2", "html_url": "https://rseng.github.io/software/repository/github/brian-team/brian2", "api_url": "https://rseng.github.io/software/api/repos/github/brian-team/brian2"}, {"uid": "github/BartoszBartmanski/StoSpa2", "html_url": "https://rseng.github.io/software/repository/github/BartoszBartmanski/StoSpa2", "api_url": "https://rseng.github.io/software/api/repos/github/BartoszBartmanski/StoSpa2"}, {"uid": "github/macrocosme/time_domain_astronomy_sandbox", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/time_domain_astronomy_sandbox", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/time_domain_astronomy_sandbox"}, {"uid": "github/macrocosme/amber_meta", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/amber_meta", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/amber_meta"}, {"uid": "github/cmbant/getdist", "html_url": "https://rseng.github.io/software/repository/github/cmbant/getdist", "api_url": "https://rseng.github.io/software/api/repos/github/cmbant/getdist"}, {"uid": "github/egonw/bacting", "html_url": "https://rseng.github.io/software/repository/github/egonw/bacting", "api_url": "https://rseng.github.io/software/api/repos/github/egonw/bacting"}, {"uid": "github/johannes-titz/cofad", "html_url": "https://rseng.github.io/software/repository/github/johannes-titz/cofad", "api_url": "https://rseng.github.io/software/api/repos/github/johannes-titz/cofad"}, {"uid": "github/seawander/centerRadon", "html_url": "https://rseng.github.io/software/repository/github/seawander/centerRadon", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/centerRadon"}, {"uid": "github/seawander/DebrisDiskFM", "html_url": "https://rseng.github.io/software/repository/github/seawander/DebrisDiskFM", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/DebrisDiskFM"}, {"uid": "github/JixingGE/GGCHEMPY", "html_url": "https://rseng.github.io/software/repository/github/JixingGE/GGCHEMPY", "api_url": "https://rseng.github.io/software/api/repos/github/JixingGE/GGCHEMPY"}, {"uid": "github/genostats/LowKi", "html_url": "https://rseng.github.io/software/repository/github/genostats/LowKi", "api_url": "https://rseng.github.io/software/api/repos/github/genostats/LowKi"}, {"uid": "github/kokkos/kokkos-fft", "html_url": "https://rseng.github.io/software/repository/github/kokkos/kokkos-fft", "api_url": "https://rseng.github.io/software/api/repos/github/kokkos/kokkos-fft"}, {"uid": "github/yair111/AnalyticLC", "html_url": "https://rseng.github.io/software/repository/github/yair111/AnalyticLC", "api_url": "https://rseng.github.io/software/api/repos/github/yair111/AnalyticLC"}, {"uid": "github/astro-informatics/harmonic", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/harmonic", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/harmonic"}, {"uid": "github/astro-informatics/s2fft", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2fft", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2fft"}, {"uid": "github/astro-informatics/DarkMappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/DarkMappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/DarkMappy"}, {"uid": "github/astro-informatics/flaglet-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flaglet-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flaglet-archive"}, {"uid": "github/astro-informatics/massmappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/massmappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/massmappy"}, {"uid": "github/astro-informatics/flag-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flag-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flag-archive"}, {"uid": "github/astro-informatics/sleplet", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/sleplet", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/sleplet"}, {"uid": "github/astro-informatics/RequiSim", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/RequiSim", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/RequiSim"}, {"uid": "github/astro-informatics/s2", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2"}, {"uid": "github/astro-informatics/QuantifAI", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/QuantifAI", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/QuantifAI"}, {"uid": "github/astro-informatics/ssht", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/ssht", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/ssht"}, {"uid": "github/astro-informatics/s2let", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2let", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2let"}, {"uid": "github/astro-informatics/stringgen", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/stringgen", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/stringgen"}, {"uid": "github/astro-informatics/comb", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/comb", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/comb"}, {"uid": "github/dkoslicki/TAMPA", "html_url": "https://rseng.github.io/software/repository/github/dkoslicki/TAMPA", "api_url": "https://rseng.github.io/software/api/repos/github/dkoslicki/TAMPA"}, {"uid": "github/ahoward-cf/ppmap", "html_url": "https://rseng.github.io/software/repository/github/ahoward-cf/ppmap", "api_url": "https://rseng.github.io/software/api/repos/github/ahoward-cf/ppmap"}, {"uid": "github/CoLRev-Environment/bib-dedupe", "html_url": "https://rseng.github.io/software/repository/github/CoLRev-Environment/bib-dedupe", "api_url": "https://rseng.github.io/software/api/repos/github/CoLRev-Environment/bib-dedupe"}, {"uid": "github/hjozwiak-umk/bigos_h2he", "html_url": "https://rseng.github.io/software/repository/github/hjozwiak-umk/bigos_h2he", "api_url": "https://rseng.github.io/software/api/repos/github/hjozwiak-umk/bigos_h2he"}, {"uid": "github/Peter-Hogg/SLAP2_Utils", "html_url": "https://rseng.github.io/software/repository/github/Peter-Hogg/SLAP2_Utils", "api_url": "https://rseng.github.io/software/api/repos/github/Peter-Hogg/SLAP2_Utils"}, {"uid": "github/sievers/corrcal", "html_url": "https://rseng.github.io/software/repository/github/sievers/corrcal", "api_url": "https://rseng.github.io/software/api/repos/github/sievers/corrcal"}, {"uid": "github/timstaley/voevent-parse", "html_url": "https://rseng.github.io/software/repository/github/timstaley/voevent-parse", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/voevent-parse"}, {"uid": "github/timstaley/chimenea", "html_url": "https://rseng.github.io/software/repository/github/timstaley/chimenea", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/chimenea"}, {"uid": "github/timstaley/amisurvey", "html_url": "https://rseng.github.io/software/repository/github/timstaley/amisurvey", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/amisurvey"}, {"uid": "github/liulab-dfci/TRUST4", "html_url": "https://rseng.github.io/software/repository/github/liulab-dfci/TRUST4", "api_url": "https://rseng.github.io/software/api/repos/github/liulab-dfci/TRUST4"}, {"uid": "github/cran/irtplay", "html_url": "https://rseng.github.io/software/repository/github/cran/irtplay", "api_url": "https://rseng.github.io/software/api/repos/github/cran/irtplay"}, {"uid": "github/ComputationalBiomechanicsLab/opensim-creator", "html_url": "https://rseng.github.io/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalBiomechanicsLab/opensim-creator"}, {"uid": "github/mlaparie/sigh", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/sigh", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/sigh"}, {"uid": "github/mlaparie/phidget-tools", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/phidget-tools", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/phidget-tools"}, {"uid": "github/adamantine-sim/adamantine", "html_url": "https://rseng.github.io/software/repository/github/adamantine-sim/adamantine", "api_url": "https://rseng.github.io/software/api/repos/github/adamantine-sim/adamantine"}, {"uid": "github/amkozlov/raxml-ng", "html_url": "https://rseng.github.io/software/repository/github/amkozlov/raxml-ng", "api_url": "https://rseng.github.io/software/api/repos/github/amkozlov/raxml-ng"}, {"uid": "github/Eventdisplay/Eventdisplay", "html_url": "https://rseng.github.io/software/repository/github/Eventdisplay/Eventdisplay", "api_url": "https://rseng.github.io/software/api/repos/github/Eventdisplay/Eventdisplay"}, {"uid": "github/CosmoStatGW/MGCosmoPop", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/MGCosmoPop", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/MGCosmoPop"}, {"uid": "github/CosmoStatGW/DarkSirensStat", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/DarkSirensStat", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/DarkSirensStat"}, {"uid": "github/CosmoStatGW/gwfast", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/gwfast", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/gwfast"}, {"uid": "github/CosmoStatGW/WF4Py", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/WF4Py", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/WF4Py"}, {"uid": "github/yungkipreos/Min-CaLM", "html_url": "https://rseng.github.io/software/repository/github/yungkipreos/Min-CaLM", "api_url": "https://rseng.github.io/software/api/repos/github/yungkipreos/Min-CaLM"}, {"uid": "github/fccoelho/epigrass", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epigrass", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epigrass"}, {"uid": "github/fccoelho/epimodels", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epimodels", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epimodels"}, {"uid": "github/CollinErickson/GauPro", "html_url": "https://rseng.github.io/software/repository/github/CollinErickson/GauPro", "api_url": "https://rseng.github.io/software/api/repos/github/CollinErickson/GauPro"}, {"uid": "github/samirmartins/pydaq", "html_url": "https://rseng.github.io/software/repository/github/samirmartins/pydaq", "api_url": "https://rseng.github.io/software/api/repos/github/samirmartins/pydaq"}, {"uid": "github/nombac/optab", "html_url": "https://rseng.github.io/software/repository/github/nombac/optab", "api_url": "https://rseng.github.io/software/api/repos/github/nombac/optab"}, {"uid": "github/cuDisc/cuDisc", "html_url": "https://rseng.github.io/software/repository/github/cuDisc/cuDisc", "api_url": "https://rseng.github.io/software/api/repos/github/cuDisc/cuDisc"}, {"uid": "github/tbep-tech/tbeptools", "html_url": "https://rseng.github.io/software/repository/github/tbep-tech/tbeptools", "api_url": "https://rseng.github.io/software/api/repos/github/tbep-tech/tbeptools"}, {"uid": "github/deaglanbartlett/symbolic_pofk", "html_url": "https://rseng.github.io/software/repository/github/deaglanbartlett/symbolic_pofk", "api_url": "https://rseng.github.io/software/api/repos/github/deaglanbartlett/symbolic_pofk"}, {"uid": "github/xiaofengsong/pHisPred", "html_url": "https://rseng.github.io/software/repository/github/xiaofengsong/pHisPred", "api_url": "https://rseng.github.io/software/api/repos/github/xiaofengsong/pHisPred"}, {"uid": "github/gmbrandt/HTOF", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/HTOF", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/HTOF"}, {"uid": "github/gmbrandt/xwavecal", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/xwavecal", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/xwavecal"}, {"uid": "github/hyperopt/hyperopt", "html_url": "https://rseng.github.io/software/repository/github/hyperopt/hyperopt", "api_url": "https://rseng.github.io/software/api/repos/github/hyperopt/hyperopt"}, {"uid": "github/ckarako/RRATtrap", "html_url": "https://rseng.github.io/software/repository/github/ckarako/RRATtrap", "api_url": "https://rseng.github.io/software/api/repos/github/ckarako/RRATtrap"}, {"uid": "github/planck-npipe/hillipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/hillipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/hillipop"}, {"uid": "github/planck-npipe/lollipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/lollipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/lollipop"}, {"uid": "github/jonescompneurolab/hnn-core", "html_url": "https://rseng.github.io/software/repository/github/jonescompneurolab/hnn-core", "api_url": "https://rseng.github.io/software/api/repos/github/jonescompneurolab/hnn-core"}, {"uid": "github/JohannesBuchner/BXA", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/BXA", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/BXA"}, {"uid": "github/JohannesBuchner/nway", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/nway", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/nway"}, {"uid": "github/JohannesBuchner/UltraNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/UltraNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/UltraNest"}, {"uid": "github/JohannesBuchner/PyMultiNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/PyMultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/PyMultiNest"}, {"uid": "github/ezquiaga/phazap", "html_url": "https://rseng.github.io/software/repository/github/ezquiaga/phazap", "api_url": "https://rseng.github.io/software/api/repos/github/ezquiaga/phazap"}, {"uid": "github/pcubillos/mc3", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/mc3", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/mc3"}, {"uid": "github/pcubillos/pyratbay", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/pyratbay", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/pyratbay"}, {"uid": "github/pcubillos/repack", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/repack", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/repack"}, {"uid": "github/pcubillos/rate", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/rate", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/rate"}, {"uid": "github/pcubillos/gen_tso", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/gen_tso", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/gen_tso"}, {"uid": "github/cabb99/open3spn2", "html_url": "https://rseng.github.io/software/repository/github/cabb99/open3spn2", "api_url": "https://rseng.github.io/software/api/repos/github/cabb99/open3spn2"}, {"uid": "github/vergauwenthomas/MetObs_toolkit", "html_url": "https://rseng.github.io/software/repository/github/vergauwenthomas/MetObs_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/vergauwenthomas/MetObs_toolkit"}, {"uid": "github/jet-net/JetNet", "html_url": "https://rseng.github.io/software/repository/github/jet-net/JetNet", "api_url": "https://rseng.github.io/software/api/repos/github/jet-net/JetNet"}, {"uid": "github/MedMaxLab/selfEEG", "html_url": "https://rseng.github.io/software/repository/github/MedMaxLab/selfEEG", "api_url": "https://rseng.github.io/software/api/repos/github/MedMaxLab/selfEEG"}, {"uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", "html_url": "https://rseng.github.io/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", "api_url": "https://rseng.github.io/software/api/repos/github/Biomedical-Imaging-Group/Steer-n-Detect"}, {"uid": "github/andersen-lab/html", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/html", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/html"}, {"uid": "github/andersen-lab/Freyja", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/Freyja", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/Freyja"}, {"uid": "github/andersen-lab/ivar", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/ivar", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/ivar"}, {"uid": "github/openjournals/joss", "html_url": "https://rseng.github.io/software/repository/github/openjournals/joss", "api_url": "https://rseng.github.io/software/api/repos/github/openjournals/joss"}, {"uid": "github/fhtouma/subgen2", "html_url": "https://rseng.github.io/software/repository/github/fhtouma/subgen2", "api_url": "https://rseng.github.io/software/api/repos/github/fhtouma/subgen2"}, {"uid": "github/ryansmcgee/seirsplus", "html_url": "https://rseng.github.io/software/repository/github/ryansmcgee/seirsplus", "api_url": "https://rseng.github.io/software/api/repos/github/ryansmcgee/seirsplus"}, {"uid": "github/agurvich/FIRE_studio", "html_url": "https://rseng.github.io/software/repository/github/agurvich/FIRE_studio", "api_url": "https://rseng.github.io/software/api/repos/github/agurvich/FIRE_studio"}, {"uid": "github/vortex-exoplanet/VIP", "html_url": "https://rseng.github.io/software/repository/github/vortex-exoplanet/VIP", "api_url": "https://rseng.github.io/software/api/repos/github/vortex-exoplanet/VIP"}, {"uid": "github/deweylab/RSEM", "html_url": "https://rseng.github.io/software/repository/github/deweylab/RSEM", "api_url": "https://rseng.github.io/software/api/repos/github/deweylab/RSEM"}, {"uid": "github/ZJUFanLab/scTITANS", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/scTITANS", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/scTITANS"}, {"uid": "github/ZJUFanLab/bulk2space", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/bulk2space", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/bulk2space"}, {"uid": "github/nmslib/hnswlib", "html_url": "https://rseng.github.io/software/repository/github/nmslib/hnswlib", "api_url": "https://rseng.github.io/software/api/repos/github/nmslib/hnswlib"}, {"uid": "github/rudolffu/pyfosc", "html_url": "https://rseng.github.io/software/repository/github/rudolffu/pyfosc", "api_url": "https://rseng.github.io/software/api/repos/github/rudolffu/pyfosc"}, {"uid": "github/lucaskorol21/GO-RXR", "html_url": "https://rseng.github.io/software/repository/github/lucaskorol21/GO-RXR", "api_url": "https://rseng.github.io/software/api/repos/github/lucaskorol21/GO-RXR"}, {"uid": "github/achael/eht-imaging", "html_url": "https://rseng.github.io/software/repository/github/achael/eht-imaging", "api_url": "https://rseng.github.io/software/api/repos/github/achael/eht-imaging"}, {"uid": "github/Hoecker-Lab/atligator", "html_url": "https://rseng.github.io/software/repository/github/Hoecker-Lab/atligator", "api_url": "https://rseng.github.io/software/api/repos/github/Hoecker-Lab/atligator"}, {"uid": "github/alastair-droop/fqtools", "html_url": "https://rseng.github.io/software/repository/github/alastair-droop/fqtools", "api_url": "https://rseng.github.io/software/api/repos/github/alastair-droop/fqtools"}, {"uid": "github/xzackli/WignerFamilies.jl", "html_url": "https://rseng.github.io/software/repository/github/xzackli/WignerFamilies.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xzackli/WignerFamilies.jl"}, {"uid": "github/cns-iu/HRA-supporting-information", "html_url": "https://rseng.github.io/software/repository/github/cns-iu/HRA-supporting-information", "api_url": "https://rseng.github.io/software/api/repos/github/cns-iu/HRA-supporting-information"}, {"uid": "github/QuantEcon/QuantEcon.py", "html_url": "https://rseng.github.io/software/repository/github/QuantEcon/QuantEcon.py", "api_url": "https://rseng.github.io/software/api/repos/github/QuantEcon/QuantEcon.py"}, {"uid": "github/barbarabodinier/fake", "html_url": "https://rseng.github.io/software/repository/github/barbarabodinier/fake", "api_url": "https://rseng.github.io/software/api/repos/github/barbarabodinier/fake"}, {"uid": "github/vferat/pycrostates", "html_url": "https://rseng.github.io/software/repository/github/vferat/pycrostates", "api_url": "https://rseng.github.io/software/api/repos/github/vferat/pycrostates"}, {"uid": "github/saberyoung/haffet", "html_url": "https://rseng.github.io/software/repository/github/saberyoung/haffet", "api_url": "https://rseng.github.io/software/api/repos/github/saberyoung/haffet"}, {"uid": "github/pmaxted/pycheops", "html_url": "https://rseng.github.io/software/repository/github/pmaxted/pycheops", "api_url": "https://rseng.github.io/software/api/repos/github/pmaxted/pycheops"}, {"uid": "github/ValeevGroup/mpqc", "html_url": "https://rseng.github.io/software/repository/github/ValeevGroup/mpqc", "api_url": "https://rseng.github.io/software/api/repos/github/ValeevGroup/mpqc"}, {"uid": "github/DerrickWood/kraken2", "html_url": "https://rseng.github.io/software/repository/github/DerrickWood/kraken2", "api_url": "https://rseng.github.io/software/api/repos/github/DerrickWood/kraken2"}, {"uid": "github/dmentipl/plonk", "html_url": "https://rseng.github.io/software/repository/github/dmentipl/plonk", "api_url": "https://rseng.github.io/software/api/repos/github/dmentipl/plonk"}, {"uid": "github/dtanoglidis/DeepShadows", "html_url": "https://rseng.github.io/software/repository/github/dtanoglidis/DeepShadows", "api_url": "https://rseng.github.io/software/api/repos/github/dtanoglidis/DeepShadows"}, {"uid": "github/henry2004y/Vlasiator.jl", "html_url": "https://rseng.github.io/software/repository/github/henry2004y/Vlasiator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/henry2004y/Vlasiator.jl"}, {"uid": "github/e-koch/FilFinder", "html_url": "https://rseng.github.io/software/repository/github/e-koch/FilFinder", "api_url": "https://rseng.github.io/software/api/repos/github/e-koch/FilFinder"}, {"uid": "github/NASA-Planetary-Science/Pade-disk-code", "html_url": "https://rseng.github.io/software/repository/github/NASA-Planetary-Science/Pade-disk-code", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-Planetary-Science/Pade-disk-code"}, {"uid": "github/tkzeng/Pangolin", "html_url": "https://rseng.github.io/software/repository/github/tkzeng/Pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/tkzeng/Pangolin"}, {"uid": "github/srdc/onfhir", "html_url": "https://rseng.github.io/software/repository/github/srdc/onfhir", "api_url": "https://rseng.github.io/software/api/repos/github/srdc/onfhir"}, {"uid": "github/wangjun1996/VisFeature", "html_url": "https://rseng.github.io/software/repository/github/wangjun1996/VisFeature", "api_url": "https://rseng.github.io/software/api/repos/github/wangjun1996/VisFeature"}, {"uid": "github/isglobal-brge/dsExposome", "html_url": "https://rseng.github.io/software/repository/github/isglobal-brge/dsExposome", "api_url": "https://rseng.github.io/software/api/repos/github/isglobal-brge/dsExposome"}, {"uid": "github/instituteofmechanics/paraqus", "html_url": "https://rseng.github.io/software/repository/github/instituteofmechanics/paraqus", "api_url": "https://rseng.github.io/software/api/repos/github/instituteofmechanics/paraqus"}, {"uid": "github/MichaelAbdul-Masih/SPAMMS", "html_url": "https://rseng.github.io/software/repository/github/MichaelAbdul-Masih/SPAMMS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelAbdul-Masih/SPAMMS"}, {"uid": "github/cpiaulet/smint", "html_url": "https://rseng.github.io/software/repository/github/cpiaulet/smint", "api_url": "https://rseng.github.io/software/api/repos/github/cpiaulet/smint"}, {"uid": "github/bxskdh/TSTA", "html_url": "https://rseng.github.io/software/repository/github/bxskdh/TSTA", "api_url": "https://rseng.github.io/software/api/repos/github/bxskdh/TSTA"}, {"uid": "github/mattevs24/reyna", "html_url": "https://rseng.github.io/software/repository/github/mattevs24/reyna", "api_url": "https://rseng.github.io/software/api/repos/github/mattevs24/reyna"}, {"uid": "github/genai-impact/ecologits", "html_url": "https://rseng.github.io/software/repository/github/genai-impact/ecologits", "api_url": "https://rseng.github.io/software/api/repos/github/genai-impact/ecologits"}, {"uid": "github/ginolhac/mapDamage", "html_url": "https://rseng.github.io/software/repository/github/ginolhac/mapDamage", "api_url": "https://rseng.github.io/software/api/repos/github/ginolhac/mapDamage"}, {"uid": "github/benhid/Sequoya", "html_url": "https://rseng.github.io/software/repository/github/benhid/Sequoya", "api_url": "https://rseng.github.io/software/api/repos/github/benhid/Sequoya"}, {"uid": "github/nigyta/dfast_core", "html_url": "https://rseng.github.io/software/repository/github/nigyta/dfast_core", "api_url": "https://rseng.github.io/software/api/repos/github/nigyta/dfast_core"}, {"uid": "github/samuelefiorini/tangle", "html_url": "https://rseng.github.io/software/repository/github/samuelefiorini/tangle", "api_url": "https://rseng.github.io/software/api/repos/github/samuelefiorini/tangle"}, {"uid": "github/ACEnglish/truvari", "html_url": "https://rseng.github.io/software/repository/github/ACEnglish/truvari", "api_url": "https://rseng.github.io/software/api/repos/github/ACEnglish/truvari"}, {"uid": "github/compomics/xilmass", "html_url": "https://rseng.github.io/software/repository/github/compomics/xilmass", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/xilmass"}, {"uid": "github/compomics/COSS", "html_url": "https://rseng.github.io/software/repository/github/compomics/COSS", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/COSS"}, {"uid": "github/compomics/DeepLC", "html_url": "https://rseng.github.io/software/repository/github/compomics/DeepLC", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/DeepLC"}, {"uid": "github/tbisbas/PDFchem", "html_url": "https://rseng.github.io/software/repository/github/tbisbas/PDFchem", "api_url": "https://rseng.github.io/software/api/repos/github/tbisbas/PDFchem"}, {"uid": "github/moldyn/msmhelper", "html_url": "https://rseng.github.io/software/repository/github/moldyn/msmhelper", "api_url": "https://rseng.github.io/software/api/repos/github/moldyn/msmhelper"}, {"uid": "github/carronj/plancklens", "html_url": "https://rseng.github.io/software/repository/github/carronj/plancklens", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/plancklens"}, {"uid": "github/carronj/lenspyx", "html_url": "https://rseng.github.io/software/repository/github/carronj/lenspyx", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/lenspyx"}, {"uid": "github/carronj/LensIt", "html_url": "https://rseng.github.io/software/repository/github/carronj/LensIt", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/LensIt"}, {"uid": "github/parkus/fiducial_flare", "html_url": "https://rseng.github.io/software/repository/github/parkus/fiducial_flare", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/fiducial_flare"}, {"uid": "github/parkus/ffd", "html_url": "https://rseng.github.io/software/repository/github/parkus/ffd", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/ffd"}, {"uid": "github/parkus/scicatalog", "html_url": "https://rseng.github.io/software/repository/github/parkus/scicatalog", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/scicatalog"}, {"uid": "github/medema-group/bigslice", "html_url": "https://rseng.github.io/software/repository/github/medema-group/bigslice", "api_url": "https://rseng.github.io/software/api/repos/github/medema-group/bigslice"}, {"uid": "github/dshawul/NebulaSEM", "html_url": "https://rseng.github.io/software/repository/github/dshawul/NebulaSEM", "api_url": "https://rseng.github.io/software/api/repos/github/dshawul/NebulaSEM"}, {"uid": "github/sefffal/Octofitter.jl", "html_url": "https://rseng.github.io/software/repository/github/sefffal/Octofitter.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sefffal/Octofitter.jl"}, {"uid": "github/T-CAIREM/physionet-build", "html_url": "https://rseng.github.io/software/repository/github/T-CAIREM/physionet-build", "api_url": "https://rseng.github.io/software/api/repos/github/T-CAIREM/physionet-build"}, {"uid": "github/pawni/BayesByHypernet", "html_url": "https://rseng.github.io/software/repository/github/pawni/BayesByHypernet", "api_url": "https://rseng.github.io/software/api/repos/github/pawni/BayesByHypernet"}, {"uid": "github/equib/equib", "html_url": "https://rseng.github.io/software/repository/github/equib/equib", "api_url": "https://rseng.github.io/software/api/repos/github/equib/equib"}, {"uid": "github/equib/pyEQUIB", "html_url": "https://rseng.github.io/software/repository/github/equib/pyEQUIB", "api_url": "https://rseng.github.io/software/api/repos/github/equib/pyEQUIB"}, {"uid": "github/cogent3/cogent3", "html_url": "https://rseng.github.io/software/repository/github/cogent3/cogent3", "api_url": "https://rseng.github.io/software/api/repos/github/cogent3/cogent3"}, {"uid": "github/hsocasnavarro/NICOLE", "html_url": "https://rseng.github.io/software/repository/github/hsocasnavarro/NICOLE", "api_url": "https://rseng.github.io/software/api/repos/github/hsocasnavarro/NICOLE"}, {"uid": "github/nathanchara/l1periodogram", "html_url": "https://rseng.github.io/software/repository/github/nathanchara/l1periodogram", "api_url": "https://rseng.github.io/software/api/repos/github/nathanchara/l1periodogram"}, {"uid": "github/ANP-Granular/ParticleTracking", "html_url": "https://rseng.github.io/software/repository/github/ANP-Granular/ParticleTracking", "api_url": "https://rseng.github.io/software/api/repos/github/ANP-Granular/ParticleTracking"}, {"uid": "github/freqtrade/freqtrade", "html_url": "https://rseng.github.io/software/repository/github/freqtrade/freqtrade", "api_url": "https://rseng.github.io/software/api/repos/github/freqtrade/freqtrade"}, {"uid": "github/MoreiraLAB/mensadb-open", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/mensadb-open", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/mensadb-open"}, {"uid": "github/MoreiraLAB/or", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/or", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/or"}, {"uid": "github/valboz/VBBinaryLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBBinaryLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBBinaryLensing"}, {"uid": "github/valboz/RTModel", "html_url": "https://rseng.github.io/software/repository/github/valboz/RTModel", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/RTModel"}, {"uid": "github/valboz/VBMicroLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBMicroLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBMicroLensing"}, {"uid": "github/ntcockroft/STarFish", "html_url": "https://rseng.github.io/software/repository/github/ntcockroft/STarFish", "api_url": "https://rseng.github.io/software/api/repos/github/ntcockroft/STarFish"}, {"uid": "github/mpip/pfft", "html_url": "https://rseng.github.io/software/repository/github/mpip/pfft", "api_url": "https://rseng.github.io/software/api/repos/github/mpip/pfft"}, {"uid": "github/mxwalbert/cohesivm", "html_url": "https://rseng.github.io/software/repository/github/mxwalbert/cohesivm", "api_url": "https://rseng.github.io/software/api/repos/github/mxwalbert/cohesivm"}, {"uid": "github/bpairet/mayo_hci", "html_url": "https://rseng.github.io/software/repository/github/bpairet/mayo_hci", "api_url": "https://rseng.github.io/software/api/repos/github/bpairet/mayo_hci"}, {"uid": "github/labjg/fibmeasure", "html_url": "https://rseng.github.io/software/repository/github/labjg/fibmeasure", "api_url": "https://rseng.github.io/software/api/repos/github/labjg/fibmeasure"}, {"uid": "github/ChristopherWilks/megadepth", "html_url": "https://rseng.github.io/software/repository/github/ChristopherWilks/megadepth", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopherWilks/megadepth"}, {"uid": "github/mathLab/PINA", "html_url": "https://rseng.github.io/software/repository/github/mathLab/PINA", "api_url": "https://rseng.github.io/software/api/repos/github/mathLab/PINA"}, {"uid": "github/UncertainLab/Enlsip.jl", "html_url": "https://rseng.github.io/software/repository/github/UncertainLab/Enlsip.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UncertainLab/Enlsip.jl"}, {"uid": "github/maddataanalyst/hextractor", "html_url": "https://rseng.github.io/software/repository/github/maddataanalyst/hextractor", "api_url": "https://rseng.github.io/software/api/repos/github/maddataanalyst/hextractor"}, {"uid": "github/hytrac/amber", "html_url": "https://rseng.github.io/software/repository/github/hytrac/amber", "api_url": "https://rseng.github.io/software/api/repos/github/hytrac/amber"}, {"uid": "github/FridleyLab/spatialGE", "html_url": "https://rseng.github.io/software/repository/github/FridleyLab/spatialGE", "api_url": "https://rseng.github.io/software/api/repos/github/FridleyLab/spatialGE"}, {"uid": "github/egpbos/barcode", "html_url": "https://rseng.github.io/software/repository/github/egpbos/barcode", "api_url": "https://rseng.github.io/software/api/repos/github/egpbos/barcode"}, {"uid": "github/GermanHeim/globalsearch-rs", "html_url": "https://rseng.github.io/software/repository/github/GermanHeim/globalsearch-rs", "api_url": "https://rseng.github.io/software/api/repos/github/GermanHeim/globalsearch-rs"}, {"uid": "github/opnavlab/sonic", "html_url": "https://rseng.github.io/software/repository/github/opnavlab/sonic", "api_url": "https://rseng.github.io/software/api/repos/github/opnavlab/sonic"}, {"uid": "github/labsyspharm/minerva-story", "html_url": "https://rseng.github.io/software/repository/github/labsyspharm/minerva-story", "api_url": "https://rseng.github.io/software/api/repos/github/labsyspharm/minerva-story"}, {"uid": "github/LuisGoncalves1/CLOWN", "html_url": "https://rseng.github.io/software/repository/github/LuisGoncalves1/CLOWN", "api_url": "https://rseng.github.io/software/api/repos/github/LuisGoncalves1/CLOWN"}, {"uid": "github/JCGonzS/mechnetor", "html_url": "https://rseng.github.io/software/repository/github/JCGonzS/mechnetor", "api_url": "https://rseng.github.io/software/api/repos/github/JCGonzS/mechnetor"}, {"uid": "github/ejsafron/SATCHEL", "html_url": "https://rseng.github.io/software/repository/github/ejsafron/SATCHEL", "api_url": "https://rseng.github.io/software/api/repos/github/ejsafron/SATCHEL"}, {"uid": "github/bbye98/mdcraft", "html_url": "https://rseng.github.io/software/repository/github/bbye98/mdcraft", "api_url": "https://rseng.github.io/software/api/repos/github/bbye98/mdcraft"}, {"uid": "github/danielreardon/scintools", "html_url": "https://rseng.github.io/software/repository/github/danielreardon/scintools", "api_url": "https://rseng.github.io/software/api/repos/github/danielreardon/scintools"}, {"uid": "github/CMakePP/CMakePPLang", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMakePPLang", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMakePPLang"}, {"uid": "github/CMakePP/CMinx", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMinx", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMinx"}, {"uid": "github/leraman/Hopla", "html_url": "https://rseng.github.io/software/repository/github/leraman/Hopla", "api_url": "https://rseng.github.io/software/api/repos/github/leraman/Hopla"}, {"uid": "github/alexander-pastukhov/bistablehistory", "html_url": "https://rseng.github.io/software/repository/github/alexander-pastukhov/bistablehistory", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-pastukhov/bistablehistory"}, {"uid": "github/deeptools/deepTools", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deepTools", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deepTools"}, {"uid": "github/deeptools/HiCExplorer", "html_url": "https://rseng.github.io/software/repository/github/deeptools/HiCExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/HiCExplorer"}, {"uid": "github/deeptools/py2bit", "html_url": "https://rseng.github.io/software/repository/github/deeptools/py2bit", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/py2bit"}, {"uid": "github/deeptools/deeptools_intervals", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deeptools_intervals", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deeptools_intervals"}, {"uid": "github/tongzhouxu/mashpit", "html_url": "https://rseng.github.io/software/repository/github/tongzhouxu/mashpit", "api_url": "https://rseng.github.io/software/api/repos/github/tongzhouxu/mashpit"}, {"uid": "github/PedroBarbosa/VETA", "html_url": "https://rseng.github.io/software/repository/github/PedroBarbosa/VETA", "api_url": "https://rseng.github.io/software/api/repos/github/PedroBarbosa/VETA"}, {"uid": "github/xavierdidelot/clonalorigin", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/clonalorigin", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/clonalorigin"}, {"uid": "github/xavierdidelot/ClonalFrameML", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/ClonalFrameML", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/ClonalFrameML"}, {"uid": "github/ckay314/OSPREI", "html_url": "https://rseng.github.io/software/repository/github/ckay314/OSPREI", "api_url": "https://rseng.github.io/software/api/repos/github/ckay314/OSPREI"}, {"uid": "github/jharno/cubep3m", "html_url": "https://rseng.github.io/software/repository/github/jharno/cubep3m", "api_url": "https://rseng.github.io/software/api/repos/github/jharno/cubep3m"}, {"uid": "github/hyosubkim/bayes-toolbox", "html_url": "https://rseng.github.io/software/repository/github/hyosubkim/bayes-toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/hyosubkim/bayes-toolbox"}, {"uid": "github/paulhjkelly/taskgraph-metaprogramming", "html_url": "https://rseng.github.io/software/repository/github/paulhjkelly/taskgraph-metaprogramming", "api_url": "https://rseng.github.io/software/api/repos/github/paulhjkelly/taskgraph-metaprogramming"}, {"uid": "github/johnpaulett/python-hl7", "html_url": "https://rseng.github.io/software/repository/github/johnpaulett/python-hl7", "api_url": "https://rseng.github.io/software/api/repos/github/johnpaulett/python-hl7"}, {"uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", "html_url": "https://rseng.github.io/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", "api_url": "https://rseng.github.io/software/api/repos/github/teamPSG/kNN_Sleep_Scorer_kNNSS"}, {"uid": "github/etempel/Bisous", "html_url": "https://rseng.github.io/software/repository/github/etempel/Bisous", "api_url": "https://rseng.github.io/software/api/repos/github/etempel/Bisous"}, {"uid": "github/c-zhou/yahs", "html_url": "https://rseng.github.io/software/repository/github/c-zhou/yahs", "api_url": "https://rseng.github.io/software/api/repos/github/c-zhou/yahs"}, {"uid": "github/Jwindler/PlotHiC", "html_url": "https://rseng.github.io/software/repository/github/Jwindler/PlotHiC", "api_url": "https://rseng.github.io/software/api/repos/github/Jwindler/PlotHiC"}, {"uid": "github/ERPI-UL/HELP-VRclient", "html_url": "https://rseng.github.io/software/repository/github/ERPI-UL/HELP-VRclient", "api_url": "https://rseng.github.io/software/api/repos/github/ERPI-UL/HELP-VRclient"}, {"uid": "github/morriscb/The-wiZZ", "html_url": "https://rseng.github.io/software/repository/github/morriscb/The-wiZZ", "api_url": "https://rseng.github.io/software/api/repos/github/morriscb/The-wiZZ"}, {"uid": "github/syasini/AstroPaint", "html_url": "https://rseng.github.io/software/repository/github/syasini/AstroPaint", "api_url": "https://rseng.github.io/software/api/repos/github/syasini/AstroPaint"}, {"uid": "github/glasgowlab/MAGPIE", "html_url": "https://rseng.github.io/software/repository/github/glasgowlab/MAGPIE", "api_url": "https://rseng.github.io/software/api/repos/github/glasgowlab/MAGPIE"}, {"uid": "github/najoshi/sickle", "html_url": "https://rseng.github.io/software/repository/github/najoshi/sickle", "api_url": "https://rseng.github.io/software/api/repos/github/najoshi/sickle"}, {"uid": "github/exobssim/rapoc-public", "html_url": "https://rseng.github.io/software/repository/github/exobssim/rapoc-public", "api_url": "https://rseng.github.io/software/api/repos/github/exobssim/rapoc-public"}, {"uid": "github/regonzar/paravt", "html_url": "https://rseng.github.io/software/repository/github/regonzar/paravt", "api_url": "https://rseng.github.io/software/api/repos/github/regonzar/paravt"}, {"uid": "github/doriancazeneuve/ODNet", "html_url": "https://rseng.github.io/software/repository/github/doriancazeneuve/ODNet", "api_url": "https://rseng.github.io/software/api/repos/github/doriancazeneuve/ODNet"}, {"uid": "github/cbrnr/sigviewer", "html_url": "https://rseng.github.io/software/repository/github/cbrnr/sigviewer", "api_url": "https://rseng.github.io/software/api/repos/github/cbrnr/sigviewer"}, {"uid": "github/cytham/nanovar", "html_url": "https://rseng.github.io/software/repository/github/cytham/nanovar", "api_url": "https://rseng.github.io/software/api/repos/github/cytham/nanovar"}, {"uid": "github/ajwheeler/korg.jl", "html_url": "https://rseng.github.io/software/repository/github/ajwheeler/korg.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ajwheeler/korg.jl"}, {"uid": "github/astromer-science/main-code", "html_url": "https://rseng.github.io/software/repository/github/astromer-science/main-code", "api_url": "https://rseng.github.io/software/api/repos/github/astromer-science/main-code"}, {"uid": "github/basehc/IPEV", "html_url": "https://rseng.github.io/software/repository/github/basehc/IPEV", "api_url": "https://rseng.github.io/software/api/repos/github/basehc/IPEV"}, {"uid": "github/variomes/sibtm-variomes", "html_url": "https://rseng.github.io/software/repository/github/variomes/sibtm-variomes", "api_url": "https://rseng.github.io/software/api/repos/github/variomes/sibtm-variomes"}, {"uid": "github/guaix-ucm/numina", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/numina", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/numina"}, {"uid": "github/guaix-ucm/megaradrp", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/megaradrp", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/megaradrp"}, {"uid": "github/Dulab2020/ARMT", "html_url": "https://rseng.github.io/software/repository/github/Dulab2020/ARMT", "api_url": "https://rseng.github.io/software/api/repos/github/Dulab2020/ARMT"}, {"uid": "github/highamm/sptotal", "html_url": "https://rseng.github.io/software/repository/github/highamm/sptotal", "api_url": "https://rseng.github.io/software/api/repos/github/highamm/sptotal"}, {"uid": "github/ijuric/MAPS", "html_url": "https://rseng.github.io/software/repository/github/ijuric/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/ijuric/MAPS"}, {"uid": "github/palaeoware/trevosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/trevosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/trevosim"}, {"uid": "github/palaeoware/revosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/revosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/revosim"}, {"uid": "github/AncientNLP/potnia", "html_url": "https://rseng.github.io/software/repository/github/AncientNLP/potnia", "api_url": "https://rseng.github.io/software/api/repos/github/AncientNLP/potnia"}, {"uid": "github/fast-data-transfer/fdt", "html_url": "https://rseng.github.io/software/repository/github/fast-data-transfer/fdt", "api_url": "https://rseng.github.io/software/api/repos/github/fast-data-transfer/fdt"}, {"uid": "github/wrenfold/wrenfold", "html_url": "https://rseng.github.io/software/repository/github/wrenfold/wrenfold", "api_url": "https://rseng.github.io/software/api/repos/github/wrenfold/wrenfold"}, {"uid": "github/extendr/extendr", "html_url": "https://rseng.github.io/software/repository/github/extendr/extendr", "api_url": "https://rseng.github.io/software/api/repos/github/extendr/extendr"}, {"uid": "github/Pithikos/C-Thread-Pool", "html_url": "https://rseng.github.io/software/repository/github/Pithikos/C-Thread-Pool", "api_url": "https://rseng.github.io/software/api/repos/github/Pithikos/C-Thread-Pool"}, {"uid": "github/climate-machine/Oceananigans.jl", "html_url": "https://rseng.github.io/software/repository/github/climate-machine/Oceananigans.jl", "api_url": "https://rseng.github.io/software/api/repos/github/climate-machine/Oceananigans.jl"}, {"uid": "github/gmrandazzo/libscientific", "html_url": "https://rseng.github.io/software/repository/github/gmrandazzo/libscientific", "api_url": "https://rseng.github.io/software/api/repos/github/gmrandazzo/libscientific"}, {"uid": "github/TeraTrees/TIPP", "html_url": "https://rseng.github.io/software/repository/github/TeraTrees/TIPP", "api_url": "https://rseng.github.io/software/api/repos/github/TeraTrees/TIPP"}, {"uid": "github/aspuru-guzik-group/funsies", "html_url": "https://rseng.github.io/software/repository/github/aspuru-guzik-group/funsies", "api_url": "https://rseng.github.io/software/api/repos/github/aspuru-guzik-group/funsies"}, {"uid": "github/soilwater/crnpy", "html_url": "https://rseng.github.io/software/repository/github/soilwater/crnpy", "api_url": "https://rseng.github.io/software/api/repos/github/soilwater/crnpy"}, {"uid": "github/johentsch/ms3", "html_url": "https://rseng.github.io/software/repository/github/johentsch/ms3", "api_url": "https://rseng.github.io/software/api/repos/github/johentsch/ms3"}, {"uid": "github/guangtunbenzhu/NonnegMFPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/NonnegMFPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/NonnegMFPy"}, {"uid": "github/guangtunbenzhu/SetCoverPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/SetCoverPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/SetCoverPy"}, {"uid": "github/fermisurfaces/IFermi", "html_url": "https://rseng.github.io/software/repository/github/fermisurfaces/IFermi", "api_url": "https://rseng.github.io/software/api/repos/github/fermisurfaces/IFermi"}, {"uid": "github/valerio-marra/CalPriorSNIa", "html_url": "https://rseng.github.io/software/repository/github/valerio-marra/CalPriorSNIa", "api_url": "https://rseng.github.io/software/api/repos/github/valerio-marra/CalPriorSNIa"}, {"uid": "github/mdtanker/polartoolkit", "html_url": "https://rseng.github.io/software/repository/github/mdtanker/polartoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/mdtanker/polartoolkit"}, {"uid": "github/nayu0419/stMMR", "html_url": "https://rseng.github.io/software/repository/github/nayu0419/stMMR", "api_url": "https://rseng.github.io/software/api/repos/github/nayu0419/stMMR"}, {"uid": "github/Nico-Curti/rFBP", "html_url": "https://rseng.github.io/software/repository/github/Nico-Curti/rFBP", "api_url": "https://rseng.github.io/software/api/repos/github/Nico-Curti/rFBP"}, {"uid": "github/leishenggit/CircleBase", "html_url": "https://rseng.github.io/software/repository/github/leishenggit/CircleBase", "api_url": "https://rseng.github.io/software/api/repos/github/leishenggit/CircleBase"}, {"uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl"}, {"uid": "github/baxmittens/VTUFileHandler", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/VTUFileHandler", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/VTUFileHandler"}, {"uid": "github/nutjunkie/IQmol", "html_url": "https://rseng.github.io/software/repository/github/nutjunkie/IQmol", "api_url": "https://rseng.github.io/software/api/repos/github/nutjunkie/IQmol"}, {"uid": "github/jgrembi/riskCommunicator", "html_url": "https://rseng.github.io/software/repository/github/jgrembi/riskCommunicator", "api_url": "https://rseng.github.io/software/api/repos/github/jgrembi/riskCommunicator"}, {"uid": "github/CIRADA-Tools/RM-Tools", "html_url": "https://rseng.github.io/software/repository/github/CIRADA-Tools/RM-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/CIRADA-Tools/RM-Tools"}, {"uid": "github/zhanglabtools/CASAVA", "html_url": "https://rseng.github.io/software/repository/github/zhanglabtools/CASAVA", "api_url": "https://rseng.github.io/software/api/repos/github/zhanglabtools/CASAVA"}, {"uid": "github/bradkav/EarthScatterLikelihood", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthScatterLikelihood", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthScatterLikelihood"}, {"uid": "github/bradkav/WIMpy_NREFT", "html_url": "https://rseng.github.io/software/repository/github/bradkav/WIMpy_NREFT", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/WIMpy_NREFT"}, {"uid": "github/bradkav/verne", "html_url": "https://rseng.github.io/software/repository/github/bradkav/verne", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/verne"}, {"uid": "github/bradkav/runDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/runDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/runDM"}, {"uid": "github/bradkav/AntiparticleDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/AntiparticleDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/AntiparticleDM"}, {"uid": "github/bradkav/DMRadon", "html_url": "https://rseng.github.io/software/repository/github/bradkav/DMRadon", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/DMRadon"}, {"uid": "github/bradkav/NbodyIMRI", "html_url": "https://rseng.github.io/software/repository/github/bradkav/NbodyIMRI", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/NbodyIMRI"}, {"uid": "github/bradkav/EarthShadow", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthShadow", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthShadow"}, {"uid": "github/bradkav/BlackHolesDarkDress", "html_url": "https://rseng.github.io/software/repository/github/bradkav/BlackHolesDarkDress", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/BlackHolesDarkDress"}, {"uid": "github/bradkav/CEvNS", "html_url": "https://rseng.github.io/software/repository/github/bradkav/CEvNS", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/CEvNS"}, {"uid": "github/londumas/redvsblue", "html_url": "https://rseng.github.io/software/repository/github/londumas/redvsblue", "api_url": "https://rseng.github.io/software/api/repos/github/londumas/redvsblue"}, {"uid": "github/csuhjhjhj/GCNCMI", "html_url": "https://rseng.github.io/software/repository/github/csuhjhjhj/GCNCMI", "api_url": "https://rseng.github.io/software/api/repos/github/csuhjhjhj/GCNCMI"}, {"uid": "github/ZhaoXM-Lab/metaMIC", "html_url": "https://rseng.github.io/software/repository/github/ZhaoXM-Lab/metaMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaoXM-Lab/metaMIC"}, {"uid": "github/ankilab/EvoVis", "html_url": "https://rseng.github.io/software/repository/github/ankilab/EvoVis", "api_url": "https://rseng.github.io/software/api/repos/github/ankilab/EvoVis"}, {"uid": "github/fabiorigamonti/bang", "html_url": "https://rseng.github.io/software/repository/github/fabiorigamonti/bang", "api_url": "https://rseng.github.io/software/api/repos/github/fabiorigamonti/bang"}, {"uid": "github/aksholokhov/pysr3", "html_url": "https://rseng.github.io/software/repository/github/aksholokhov/pysr3", "api_url": "https://rseng.github.io/software/api/repos/github/aksholokhov/pysr3"}, {"uid": "github/pjcigan/obsplanning", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/obsplanning", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/obsplanning"}, {"uid": "github/pjcigan/pysymlog", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/pysymlog", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/pysymlog"}, {"uid": "github/pjcigan/multicolorfits", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/multicolorfits", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/multicolorfits"}, {"uid": "github/Genentech/SPEX", "html_url": "https://rseng.github.io/software/repository/github/Genentech/SPEX", "api_url": "https://rseng.github.io/software/api/repos/github/Genentech/SPEX"}, {"uid": "github/nick-youngblut/gtdb_to_taxdump", "html_url": "https://rseng.github.io/software/repository/github/nick-youngblut/gtdb_to_taxdump", "api_url": "https://rseng.github.io/software/api/repos/github/nick-youngblut/gtdb_to_taxdump"}, {"uid": "github/gausspy/gausspy", "html_url": "https://rseng.github.io/software/repository/github/gausspy/gausspy", "api_url": "https://rseng.github.io/software/api/repos/github/gausspy/gausspy"}, {"uid": "github/thejackal360/OpenPelt-Public", "html_url": "https://rseng.github.io/software/repository/github/thejackal360/OpenPelt-Public", "api_url": "https://rseng.github.io/software/api/repos/github/thejackal360/OpenPelt-Public"}, {"uid": "github/samconnolly/DELightcurveSimulation", "html_url": "https://rseng.github.io/software/repository/github/samconnolly/DELightcurveSimulation", "api_url": "https://rseng.github.io/software/api/repos/github/samconnolly/DELightcurveSimulation"}, {"uid": "github/mikolmogorov/Flye", "html_url": "https://rseng.github.io/software/repository/github/mikolmogorov/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/mikolmogorov/Flye"}, {"uid": "github/MelanieKahl/MechAnalyze", "html_url": "https://rseng.github.io/software/repository/github/MelanieKahl/MechAnalyze", "api_url": "https://rseng.github.io/software/api/repos/github/MelanieKahl/MechAnalyze"}, {"uid": "github/waynebhayes/SpArcFiRe", "html_url": "https://rseng.github.io/software/repository/github/waynebhayes/SpArcFiRe", "api_url": "https://rseng.github.io/software/api/repos/github/waynebhayes/SpArcFiRe"}, {"uid": "github/canorve/GALFITools", "html_url": "https://rseng.github.io/software/repository/github/canorve/GALFITools", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/GALFITools"}, {"uid": "github/canorve/EllipSect", "html_url": "https://rseng.github.io/software/repository/github/canorve/EllipSect", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/EllipSect"}, {"uid": "github/ARC-OPT/wbc", "html_url": "https://rseng.github.io/software/repository/github/ARC-OPT/wbc", "api_url": "https://rseng.github.io/software/api/repos/github/ARC-OPT/wbc"}, {"uid": "github/filipezabala/voice", "html_url": "https://rseng.github.io/software/repository/github/filipezabala/voice", "api_url": "https://rseng.github.io/software/api/repos/github/filipezabala/voice"}, {"uid": "github/ArneTillmann/AuDoLab", "html_url": "https://rseng.github.io/software/repository/github/ArneTillmann/AuDoLab", "api_url": "https://rseng.github.io/software/api/repos/github/ArneTillmann/AuDoLab"}, {"uid": "github/glue-viz/glue", "html_url": "https://rseng.github.io/software/repository/github/glue-viz/glue", "api_url": "https://rseng.github.io/software/api/repos/github/glue-viz/glue"}, {"uid": "github/fhcrc/seqmagick", "html_url": "https://rseng.github.io/software/repository/github/fhcrc/seqmagick", "api_url": "https://rseng.github.io/software/api/repos/github/fhcrc/seqmagick"}, {"uid": "github/LaRoccaRaphael/MSI_recalibration", "html_url": "https://rseng.github.io/software/repository/github/LaRoccaRaphael/MSI_recalibration", "api_url": "https://rseng.github.io/software/api/repos/github/LaRoccaRaphael/MSI_recalibration"}, {"uid": "github/EXP-code/EXP", "html_url": "https://rseng.github.io/software/repository/github/EXP-code/EXP", "api_url": "https://rseng.github.io/software/api/repos/github/EXP-code/EXP"}, {"uid": "github/bartongroup/RoSA", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/RoSA", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/RoSA"}, {"uid": "github/bartongroup/yanosim", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/yanosim", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/yanosim"}, {"uid": "github/chiaraherzog/eutopsQC", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/eutopsQC", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/eutopsQC"}, {"uid": "github/chiaraherzog/WIDclocks", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/WIDclocks", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/WIDclocks"}, {"uid": "github/martinfleis/clustergram", "html_url": "https://rseng.github.io/software/repository/github/martinfleis/clustergram", "api_url": "https://rseng.github.io/software/api/repos/github/martinfleis/clustergram"}, {"uid": "github/jorittmo/singcar", "html_url": "https://rseng.github.io/software/repository/github/jorittmo/singcar", "api_url": "https://rseng.github.io/software/api/repos/github/jorittmo/singcar"}, {"uid": "github/Johannes-Sahlmann/pygacs", "html_url": "https://rseng.github.io/software/repository/github/Johannes-Sahlmann/pygacs", "api_url": "https://rseng.github.io/software/api/repos/github/Johannes-Sahlmann/pygacs"}, {"uid": "github/benmkent/SparseGridsKit.jl", "html_url": "https://rseng.github.io/software/repository/github/benmkent/SparseGridsKit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/benmkent/SparseGridsKit.jl"}, {"uid": "github/smillerc/CurvilinearGrids.jl", "html_url": "https://rseng.github.io/software/repository/github/smillerc/CurvilinearGrids.jl", "api_url": "https://rseng.github.io/software/api/repos/github/smillerc/CurvilinearGrids.jl"}, {"uid": "github/DLR-RM/BlenderProc", "html_url": "https://rseng.github.io/software/repository/github/DLR-RM/BlenderProc", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-RM/BlenderProc"}, {"uid": "github/lumen-org/lumen", "html_url": "https://rseng.github.io/software/repository/github/lumen-org/lumen", "api_url": "https://rseng.github.io/software/api/repos/github/lumen-org/lumen"}, {"uid": "github/mlinderm/npsv", "html_url": "https://rseng.github.io/software/repository/github/mlinderm/npsv", "api_url": "https://rseng.github.io/software/api/repos/github/mlinderm/npsv"}, {"uid": "github/c3s-magic/c3s-magic-wps", "html_url": "https://rseng.github.io/software/repository/github/c3s-magic/c3s-magic-wps", "api_url": "https://rseng.github.io/software/api/repos/github/c3s-magic/c3s-magic-wps"}, {"uid": "github/AprilYuge/ResPAN", "html_url": "https://rseng.github.io/software/repository/github/AprilYuge/ResPAN", "api_url": "https://rseng.github.io/software/api/repos/github/AprilYuge/ResPAN"}, {"uid": "github/ZhenjiangFan/DAG-deepVASE", "html_url": "https://rseng.github.io/software/repository/github/ZhenjiangFan/DAG-deepVASE", "api_url": "https://rseng.github.io/software/api/repos/github/ZhenjiangFan/DAG-deepVASE"}, {"uid": "github/radwinskis/RadGEEToolbox", "html_url": "https://rseng.github.io/software/repository/github/radwinskis/RadGEEToolbox", "api_url": "https://rseng.github.io/software/api/repos/github/radwinskis/RadGEEToolbox"}, {"uid": "github/damocles-code/damocles", "html_url": "https://rseng.github.io/software/repository/github/damocles-code/damocles", "api_url": "https://rseng.github.io/software/api/repos/github/damocles-code/damocles"}, {"uid": "github/ThomasBakx/cobra", "html_url": "https://rseng.github.io/software/repository/github/ThomasBakx/cobra", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasBakx/cobra"}, {"uid": "github/gigjozsa/tirific", "html_url": "https://rseng.github.io/software/repository/github/gigjozsa/tirific", "api_url": "https://rseng.github.io/software/api/repos/github/gigjozsa/tirific"}, {"uid": "github/dib-lab/TheGreatGenotyper", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/TheGreatGenotyper", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/TheGreatGenotyper"}, {"uid": "github/dib-lab/dammit", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/dammit", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/dammit"}, {"uid": "github/dib-lab/sourmash", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/sourmash"}, {"uid": "github/GunzIvan28/rMAP", "html_url": "https://rseng.github.io/software/repository/github/GunzIvan28/rMAP", "api_url": "https://rseng.github.io/software/api/repos/github/GunzIvan28/rMAP"}, {"uid": "github/dnarayanan/powderday", "html_url": "https://rseng.github.io/software/repository/github/dnarayanan/powderday", "api_url": "https://rseng.github.io/software/api/repos/github/dnarayanan/powderday"}, {"uid": "github/SSDataLab/vetting", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/vetting", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/vetting"}, {"uid": "github/SSDataLab/psfmachine", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/psfmachine", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/psfmachine"}, {"uid": "github/adrijd/beamconv", "html_url": "https://rseng.github.io/software/repository/github/adrijd/beamconv", "api_url": "https://rseng.github.io/software/api/repos/github/adrijd/beamconv"}, {"uid": "github/ci-for-science/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-science/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-science/self-hosted-runners"}, {"uid": "github/Kambrian/HBTplus", "html_url": "https://rseng.github.io/software/repository/github/Kambrian/HBTplus", "api_url": "https://rseng.github.io/software/api/repos/github/Kambrian/HBTplus"}, {"uid": "github/microbioinformatic/Co-PATHOgenex", "html_url": "https://rseng.github.io/software/repository/github/microbioinformatic/Co-PATHOgenex", "api_url": "https://rseng.github.io/software/api/repos/github/microbioinformatic/Co-PATHOgenex"}, {"uid": "github/AntoineDarveau/jwst", "html_url": "https://rseng.github.io/software/repository/github/AntoineDarveau/jwst", "api_url": "https://rseng.github.io/software/api/repos/github/AntoineDarveau/jwst"}, {"uid": "github/tomasplsek/CADET", "html_url": "https://rseng.github.io/software/repository/github/tomasplsek/CADET", "api_url": "https://rseng.github.io/software/api/repos/github/tomasplsek/CADET"}, {"uid": "github/nexml/nexml.java", "html_url": "https://rseng.github.io/software/repository/github/nexml/nexml.java", "api_url": "https://rseng.github.io/software/api/repos/github/nexml/nexml.java"}, {"uid": "github/lyf222/alpconv", "html_url": "https://rseng.github.io/software/repository/github/lyf222/alpconv", "api_url": "https://rseng.github.io/software/api/repos/github/lyf222/alpconv"}, {"uid": "github/Valdes-Tresanco-MS/NbThermo", "html_url": "https://rseng.github.io/software/repository/github/Valdes-Tresanco-MS/NbThermo", "api_url": "https://rseng.github.io/software/api/repos/github/Valdes-Tresanco-MS/NbThermo"}, {"uid": "github/mkplummer/Imber", "html_url": "https://rseng.github.io/software/repository/github/mkplummer/Imber", "api_url": "https://rseng.github.io/software/api/repos/github/mkplummer/Imber"}, {"uid": "github/dansarie/sboxgates", "html_url": "https://rseng.github.io/software/repository/github/dansarie/sboxgates", "api_url": "https://rseng.github.io/software/api/repos/github/dansarie/sboxgates"}, {"uid": "github/aboucaud/pypher", "html_url": "https://rseng.github.io/software/repository/github/aboucaud/pypher", "api_url": "https://rseng.github.io/software/api/repos/github/aboucaud/pypher"}, {"uid": "github/T0ngChen/medRCT", "html_url": "https://rseng.github.io/software/repository/github/T0ngChen/medRCT", "api_url": "https://rseng.github.io/software/api/repos/github/T0ngChen/medRCT"}, {"uid": "github/coljac/sensie", "html_url": "https://rseng.github.io/software/repository/github/coljac/sensie", "api_url": "https://rseng.github.io/software/api/repos/github/coljac/sensie"}, {"uid": "github/BigDataBiology/macrel", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/macrel", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/macrel"}, {"uid": "github/BigDataBiology/argNorm", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/argNorm", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/argNorm"}, {"uid": "github/sndik16/SFR_ChebyFit_example", "html_url": "https://rseng.github.io/software/repository/github/sndik16/SFR_ChebyFit_example", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/SFR_ChebyFit_example"}, {"uid": "github/sndik16/GAMA_quasarhosts_starformation", "html_url": "https://rseng.github.io/software/repository/github/sndik16/GAMA_quasarhosts_starformation", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/GAMA_quasarhosts_starformation"}, {"uid": "github/sndik16/light-GG", "html_url": "https://rseng.github.io/software/repository/github/sndik16/light-GG", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/light-GG"}, {"uid": "github/ageorgakakis/StructureFunction", "html_url": "https://rseng.github.io/software/repository/github/ageorgakakis/StructureFunction", "api_url": "https://rseng.github.io/software/api/repos/github/ageorgakakis/StructureFunction"}, {"uid": "github/rjsmethurst/snitch", "html_url": "https://rseng.github.io/software/repository/github/rjsmethurst/snitch", "api_url": "https://rseng.github.io/software/api/repos/github/rjsmethurst/snitch"}, {"uid": "github/smog-server/OpenSMOG", "html_url": "https://rseng.github.io/software/repository/github/smog-server/OpenSMOG", "api_url": "https://rseng.github.io/software/api/repos/github/smog-server/OpenSMOG"}, {"uid": "github/aakepley/autobox", "html_url": "https://rseng.github.io/software/repository/github/aakepley/autobox", "api_url": "https://rseng.github.io/software/api/repos/github/aakepley/autobox"}, {"uid": "github/emossoux/LIFELINE", "html_url": "https://rseng.github.io/software/repository/github/emossoux/LIFELINE", "api_url": "https://rseng.github.io/software/api/repos/github/emossoux/LIFELINE"}, {"uid": "github/GijsMulders/epos", "html_url": "https://rseng.github.io/software/repository/github/GijsMulders/epos", "api_url": "https://rseng.github.io/software/api/repos/github/GijsMulders/epos"}, {"uid": "github/vicruiser/3Dmapper", "html_url": "https://rseng.github.io/software/repository/github/vicruiser/3Dmapper", "api_url": "https://rseng.github.io/software/api/repos/github/vicruiser/3Dmapper"}, {"uid": "github/ruiying-ocean/cgeniepy", "html_url": "https://rseng.github.io/software/repository/github/ruiying-ocean/cgeniepy", "api_url": "https://rseng.github.io/software/api/repos/github/ruiying-ocean/cgeniepy"}, {"uid": "github/algo-cancer/CAMMiQ", "html_url": "https://rseng.github.io/software/repository/github/algo-cancer/CAMMiQ", "api_url": "https://rseng.github.io/software/api/repos/github/algo-cancer/CAMMiQ"}, {"uid": "github/NextGenCMB/lensitbiases", "html_url": "https://rseng.github.io/software/repository/github/NextGenCMB/lensitbiases", "api_url": "https://rseng.github.io/software/api/repos/github/NextGenCMB/lensitbiases"}, {"uid": "github/pelican/pelican", "html_url": "https://rseng.github.io/software/repository/github/pelican/pelican", "api_url": "https://rseng.github.io/software/api/repos/github/pelican/pelican"}, {"uid": "github/seap-udea/iWander", "html_url": "https://rseng.github.io/software/repository/github/seap-udea/iWander", "api_url": "https://rseng.github.io/software/api/repos/github/seap-udea/iWander"}, {"uid": "github/524D/compareMS2", "html_url": "https://rseng.github.io/software/repository/github/524D/compareMS2", "api_url": "https://rseng.github.io/software/api/repos/github/524D/compareMS2"}, {"uid": "github/JoschaJ/mockFRBhosts", "html_url": "https://rseng.github.io/software/repository/github/JoschaJ/mockFRBhosts", "api_url": "https://rseng.github.io/software/api/repos/github/JoschaJ/mockFRBhosts"}, {"uid": "github/GeodynamicWorldBuilder/WorldBuilder", "html_url": "https://rseng.github.io/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/GeodynamicWorldBuilder/WorldBuilder"}, {"uid": "github/BioinformaticsPlatformWIV-ISP/PACU", "html_url": "https://rseng.github.io/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", "api_url": "https://rseng.github.io/software/api/repos/github/BioinformaticsPlatformWIV-ISP/PACU"}, {"uid": "github/GOALS-survey/CAFE", "html_url": "https://rseng.github.io/software/repository/github/GOALS-survey/CAFE", "api_url": "https://rseng.github.io/software/api/repos/github/GOALS-survey/CAFE"}, {"uid": "github/apaolillo/pythainer", "html_url": "https://rseng.github.io/software/repository/github/apaolillo/pythainer", "api_url": "https://rseng.github.io/software/api/repos/github/apaolillo/pythainer"}, {"uid": "github/jaimedelacruz/stic", "html_url": "https://rseng.github.io/software/repository/github/jaimedelacruz/stic", "api_url": "https://rseng.github.io/software/api/repos/github/jaimedelacruz/stic"}, {"uid": "github/openmsi/openmsistream", "html_url": "https://rseng.github.io/software/repository/github/openmsi/openmsistream", "api_url": "https://rseng.github.io/software/api/repos/github/openmsi/openmsistream"}, {"uid": "github/rauschenberger/joinet", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/joinet", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/joinet"}, {"uid": "github/rauschenberger/transreg", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/transreg", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/transreg"}, {"uid": "github/ranieremenezes/easyFermi", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyFermi", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyFermi"}, {"uid": "github/ranieremenezes/easyspec", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyspec", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyspec"}, {"uid": "github/USEPA/nsink", "html_url": "https://rseng.github.io/software/repository/github/USEPA/nsink", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/nsink"}, {"uid": "github/USEPA/harmonize-wq", "html_url": "https://rseng.github.io/software/repository/github/USEPA/harmonize-wq", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/harmonize-wq"}, {"uid": "github/USEPA/peat", "html_url": "https://rseng.github.io/software/repository/github/USEPA/peat", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/peat"}, {"uid": "github/USEPA/MCSimMod", "html_url": "https://rseng.github.io/software/repository/github/USEPA/MCSimMod", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/MCSimMod"}, {"uid": "github/USEPA/SSN2", "html_url": "https://rseng.github.io/software/repository/github/USEPA/SSN2", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/SSN2"}, {"uid": "github/tolkit/telomeric-identifier", "html_url": "https://rseng.github.io/software/repository/github/tolkit/telomeric-identifier", "api_url": "https://rseng.github.io/software/api/repos/github/tolkit/telomeric-identifier"}, {"uid": "github/ElucidataInc/ElMaven", "html_url": "https://rseng.github.io/software/repository/github/ElucidataInc/ElMaven", "api_url": "https://rseng.github.io/software/api/repos/github/ElucidataInc/ElMaven"}, {"uid": "github/algolab/shark", "html_url": "https://rseng.github.io/software/repository/github/algolab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/algolab/shark"}, {"uid": "github/BioHPC/MegaD", "html_url": "https://rseng.github.io/software/repository/github/BioHPC/MegaD", "api_url": "https://rseng.github.io/software/api/repos/github/BioHPC/MegaD"}, {"uid": "github/mslonina/Mechanic", "html_url": "https://rseng.github.io/software/repository/github/mslonina/Mechanic", "api_url": "https://rseng.github.io/software/api/repos/github/mslonina/Mechanic"}, {"uid": "github/idptools/metapredict", "html_url": "https://rseng.github.io/software/repository/github/idptools/metapredict", "api_url": "https://rseng.github.io/software/api/repos/github/idptools/metapredict"}, {"uid": "github/szymon-datalions/pyinterpolate", "html_url": "https://rseng.github.io/software/repository/github/szymon-datalions/pyinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/szymon-datalions/pyinterpolate"}, {"uid": "github/mlafarga/raccoon", "html_url": "https://rseng.github.io/software/repository/github/mlafarga/raccoon", "api_url": "https://rseng.github.io/software/api/repos/github/mlafarga/raccoon"}, {"uid": "github/NicolasHug/Surprise", "html_url": "https://rseng.github.io/software/repository/github/NicolasHug/Surprise", "api_url": "https://rseng.github.io/software/api/repos/github/NicolasHug/Surprise"}, {"uid": "github/odlomax/spamcart-dev", "html_url": "https://rseng.github.io/software/repository/github/odlomax/spamcart-dev", "api_url": "https://rseng.github.io/software/api/repos/github/odlomax/spamcart-dev"}, {"uid": "github/SolavLab/DuoDIC", "html_url": "https://rseng.github.io/software/repository/github/SolavLab/DuoDIC", "api_url": "https://rseng.github.io/software/api/repos/github/SolavLab/DuoDIC"}, {"uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", "html_url": "https://rseng.github.io/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", "api_url": "https://rseng.github.io/software/api/repos/github/Julian-Sommer/chen-dai-2025-lightcurve-model"}, {"uid": "github/mphowardlab/lammpsio", "html_url": "https://rseng.github.io/software/repository/github/mphowardlab/lammpsio", "api_url": "https://rseng.github.io/software/api/repos/github/mphowardlab/lammpsio"}, {"uid": "github/SMTG-UCL/surfaxe", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/surfaxe", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/surfaxe"}, {"uid": "github/SMTG-UCL/ShakeNBreak", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/ShakeNBreak", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/ShakeNBreak"}, {"uid": "github/NikolayOskolkov/MCWorkflow", "html_url": "https://rseng.github.io/software/repository/github/NikolayOskolkov/MCWorkflow", "api_url": "https://rseng.github.io/software/api/repos/github/NikolayOskolkov/MCWorkflow"}, {"uid": "github/tinawunderlich/MultichannelGPR", "html_url": "https://rseng.github.io/software/repository/github/tinawunderlich/MultichannelGPR", "api_url": "https://rseng.github.io/software/api/repos/github/tinawunderlich/MultichannelGPR"}, {"uid": "github/smoh/kinesis", "html_url": "https://rseng.github.io/software/repository/github/smoh/kinesis", "api_url": "https://rseng.github.io/software/api/repos/github/smoh/kinesis"}, {"uid": "github/SchlossLab/mikropml", "html_url": "https://rseng.github.io/software/repository/github/SchlossLab/mikropml", "api_url": "https://rseng.github.io/software/api/repos/github/SchlossLab/mikropml"}, {"uid": "github/numpy/numpy", "html_url": "https://rseng.github.io/software/repository/github/numpy/numpy", "api_url": "https://rseng.github.io/software/api/repos/github/numpy/numpy"}, {"uid": "github/nedtaylor/athena", "html_url": "https://rseng.github.io/software/repository/github/nedtaylor/athena", "api_url": "https://rseng.github.io/software/api/repos/github/nedtaylor/athena"}, {"uid": "github/sumn2u/annotate-lab", "html_url": "https://rseng.github.io/software/repository/github/sumn2u/annotate-lab", "api_url": "https://rseng.github.io/software/api/repos/github/sumn2u/annotate-lab"}, {"uid": "github/shilpagarg/WHdenovo", "html_url": "https://rseng.github.io/software/repository/github/shilpagarg/WHdenovo", "api_url": "https://rseng.github.io/software/api/repos/github/shilpagarg/WHdenovo"}, {"uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", "html_url": "https://rseng.github.io/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", "api_url": "https://rseng.github.io/software/api/repos/github/VIRAC-SPACE/Automatic_Correlation_information_system"}, {"uid": "github/elsoroka/Satisfiability.jl", "html_url": "https://rseng.github.io/software/repository/github/elsoroka/Satisfiability.jl", "api_url": "https://rseng.github.io/software/api/repos/github/elsoroka/Satisfiability.jl"}, {"uid": "github/alphapsa/PIPE", "html_url": "https://rseng.github.io/software/repository/github/alphapsa/PIPE", "api_url": "https://rseng.github.io/software/api/repos/github/alphapsa/PIPE"}, {"uid": "github/goshng/polap", "html_url": "https://rseng.github.io/software/repository/github/goshng/polap", "api_url": "https://rseng.github.io/software/api/repos/github/goshng/polap"}, {"uid": "github/txopen/histoc", "html_url": "https://rseng.github.io/software/repository/github/txopen/histoc", "api_url": "https://rseng.github.io/software/api/repos/github/txopen/histoc"}, {"uid": "github/HajimeKawahara/exojax", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/exojax", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/exojax"}, {"uid": "github/HajimeKawahara/juwvid", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/juwvid", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/juwvid"}, {"uid": "github/HajimeKawahara/sot", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/sot", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/sot"}, {"uid": "github/morphometry/papaya2", "html_url": "https://rseng.github.io/software/repository/github/morphometry/papaya2", "api_url": "https://rseng.github.io/software/api/repos/github/morphometry/papaya2"}, {"uid": "github/xcompact3d/Incompact3d", "html_url": "https://rseng.github.io/software/repository/github/xcompact3d/Incompact3d", "api_url": "https://rseng.github.io/software/api/repos/github/xcompact3d/Incompact3d"}, {"uid": "github/valentineap/pyprop8", "html_url": "https://rseng.github.io/software/repository/github/valentineap/pyprop8", "api_url": "https://rseng.github.io/software/api/repos/github/valentineap/pyprop8"}, {"uid": "github/argiopetech/base", "html_url": "https://rseng.github.io/software/repository/github/argiopetech/base", "api_url": "https://rseng.github.io/software/api/repos/github/argiopetech/base"}, {"uid": "github/tao-bioinfo/MiFish", "html_url": "https://rseng.github.io/software/repository/github/tao-bioinfo/MiFish", "api_url": "https://rseng.github.io/software/api/repos/github/tao-bioinfo/MiFish"}, {"uid": "github/trevorgokey/besmarts", "html_url": "https://rseng.github.io/software/repository/github/trevorgokey/besmarts", "api_url": "https://rseng.github.io/software/api/repos/github/trevorgokey/besmarts"}, {"uid": "github/HinodeXRT/xrtpy", "html_url": "https://rseng.github.io/software/repository/github/HinodeXRT/xrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/HinodeXRT/xrtpy"}, {"uid": "github/KVSlab/turtleFSI", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/turtleFSI", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/turtleFSI"}, {"uid": "github/KVSlab/VaMPy", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/VaMPy", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/VaMPy"}, {"uid": "github/insightsengineering/rbmi", "html_url": "https://rseng.github.io/software/repository/github/insightsengineering/rbmi", "api_url": "https://rseng.github.io/software/api/repos/github/insightsengineering/rbmi"}, {"uid": "github/rivasiker/PhaseTypeR", "html_url": "https://rseng.github.io/software/repository/github/rivasiker/PhaseTypeR", "api_url": "https://rseng.github.io/software/api/repos/github/rivasiker/PhaseTypeR"}, {"uid": "github/bolverk/huji-rich", "html_url": "https://rseng.github.io/software/repository/github/bolverk/huji-rich", "api_url": "https://rseng.github.io/software/api/repos/github/bolverk/huji-rich"}, {"uid": "github/pandegroup/openmm", "html_url": "https://rseng.github.io/software/repository/github/pandegroup/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/pandegroup/openmm"}, {"uid": "github/dr-joe-wirth/primerForge", "html_url": "https://rseng.github.io/software/repository/github/dr-joe-wirth/primerForge", "api_url": "https://rseng.github.io/software/api/repos/github/dr-joe-wirth/primerForge"}, {"uid": "github/wcoulton/CompressedFisher", "html_url": "https://rseng.github.io/software/repository/github/wcoulton/CompressedFisher", "api_url": "https://rseng.github.io/software/api/repos/github/wcoulton/CompressedFisher"}, {"uid": "github/smith-chem-wisc/MetaMorpheus", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/MetaMorpheus", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/MetaMorpheus"}, {"uid": "github/smith-chem-wisc/ProteaseGuru", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/ProteaseGuru", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/ProteaseGuru"}, {"uid": "github/RECeSS-EU-Project/stanscofi", "html_url": "https://rseng.github.io/software/repository/github/RECeSS-EU-Project/stanscofi", "api_url": "https://rseng.github.io/software/api/repos/github/RECeSS-EU-Project/stanscofi"}, {"uid": "github/TimothyADavis/GAStimator", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/GAStimator", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/GAStimator"}, {"uid": "github/TimothyADavis/KinMSpy", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/KinMSpy", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/KinMSpy"}, {"uid": "github/biofold/ddgun", "html_url": "https://rseng.github.io/software/repository/github/biofold/ddgun", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/ddgun"}, {"uid": "github/biofold/PhD-SNPg", "html_url": "https://rseng.github.io/software/repository/github/biofold/PhD-SNPg", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/PhD-SNPg"}, {"uid": "github/jordanflitter/21cmFirstCLASS", "html_url": "https://rseng.github.io/software/repository/github/jordanflitter/21cmFirstCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/jordanflitter/21cmFirstCLASS"}, {"uid": "github/nicokurtovic/SIMIO", "html_url": "https://rseng.github.io/software/repository/github/nicokurtovic/SIMIO", "api_url": "https://rseng.github.io/software/api/repos/github/nicokurtovic/SIMIO"}, {"uid": "github/pasteurlabs/tesseract-core", "html_url": "https://rseng.github.io/software/repository/github/pasteurlabs/tesseract-core", "api_url": "https://rseng.github.io/software/api/repos/github/pasteurlabs/tesseract-core"}, {"uid": "github/phineasng/DECODE", "html_url": "https://rseng.github.io/software/repository/github/phineasng/DECODE", "api_url": "https://rseng.github.io/software/api/repos/github/phineasng/DECODE"}, {"uid": "github/thetisproject/thetis", "html_url": "https://rseng.github.io/software/repository/github/thetisproject/thetis", "api_url": "https://rseng.github.io/software/api/repos/github/thetisproject/thetis"}, {"uid": "github/nvanalfen/halotools", "html_url": "https://rseng.github.io/software/repository/github/nvanalfen/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/nvanalfen/halotools"}, {"uid": "github/YaoGroup/DIFFICE_jax", "html_url": "https://rseng.github.io/software/repository/github/YaoGroup/DIFFICE_jax", "api_url": "https://rseng.github.io/software/api/repos/github/YaoGroup/DIFFICE_jax"}, {"uid": "github/adamgayoso/totalVI_reproducibility", "html_url": "https://rseng.github.io/software/repository/github/adamgayoso/totalVI_reproducibility", "api_url": "https://rseng.github.io/software/api/repos/github/adamgayoso/totalVI_reproducibility"}, {"uid": "github/locasto/libdisorder", "html_url": "https://rseng.github.io/software/repository/github/locasto/libdisorder", "api_url": "https://rseng.github.io/software/api/repos/github/locasto/libdisorder"}, {"uid": "github/adithirgis/pollucheck", "html_url": "https://rseng.github.io/software/repository/github/adithirgis/pollucheck", "api_url": "https://rseng.github.io/software/api/repos/github/adithirgis/pollucheck"}, {"uid": "github/jhayer/baargin", "html_url": "https://rseng.github.io/software/repository/github/jhayer/baargin", "api_url": "https://rseng.github.io/software/api/repos/github/jhayer/baargin"}, {"uid": "github/cullanhowlett/l-picola", "html_url": "https://rseng.github.io/software/repository/github/cullanhowlett/l-picola", "api_url": "https://rseng.github.io/software/api/repos/github/cullanhowlett/l-picola"}, {"uid": "github/bids-apps/giga_connectome", "html_url": "https://rseng.github.io/software/repository/github/bids-apps/giga_connectome", "api_url": "https://rseng.github.io/software/api/repos/github/bids-apps/giga_connectome"}, {"uid": "github/Trovemaster/Duo", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/Duo", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/Duo"}, {"uid": "github/Trovemaster/exocross", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/exocross", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/exocross"}, {"uid": "github/Trovemaster/TROVE", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/TROVE", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/TROVE"}, {"uid": "github/rorybarnes/EqTide", "html_url": "https://rseng.github.io/software/repository/github/rorybarnes/EqTide", "api_url": "https://rseng.github.io/software/api/repos/github/rorybarnes/EqTide"}, {"uid": "github/trygvrad/DF-XRM_viz", "html_url": "https://rseng.github.io/software/repository/github/trygvrad/DF-XRM_viz", "api_url": "https://rseng.github.io/software/api/repos/github/trygvrad/DF-XRM_viz"}, {"uid": "github/CastillonMiguel/phasefieldx", "html_url": "https://rseng.github.io/software/repository/github/CastillonMiguel/phasefieldx", "api_url": "https://rseng.github.io/software/api/repos/github/CastillonMiguel/phasefieldx"}, {"uid": "github/VarStarDetect/varstardetect", "html_url": "https://rseng.github.io/software/repository/github/VarStarDetect/varstardetect", "api_url": "https://rseng.github.io/software/api/repos/github/VarStarDetect/varstardetect"}, {"uid": "github/jdeast/EXOFASTv2", "html_url": "https://rseng.github.io/software/repository/github/jdeast/EXOFASTv2", "api_url": "https://rseng.github.io/software/api/repos/github/jdeast/EXOFASTv2"}, {"uid": "github/TrackerControl/tracker-control-android", "html_url": "https://rseng.github.io/software/repository/github/TrackerControl/tracker-control-android", "api_url": "https://rseng.github.io/software/api/repos/github/TrackerControl/tracker-control-android"}, {"uid": "github/linbox-team/linbox", "html_url": "https://rseng.github.io/software/repository/github/linbox-team/linbox", "api_url": "https://rseng.github.io/software/api/repos/github/linbox-team/linbox"}, {"uid": "github/carlosandrepaes/GaPP", "html_url": "https://rseng.github.io/software/repository/github/carlosandrepaes/GaPP", "api_url": "https://rseng.github.io/software/api/repos/github/carlosandrepaes/GaPP"}, {"uid": "github/krab1k/ChargeFW2", "html_url": "https://rseng.github.io/software/repository/github/krab1k/ChargeFW2", "api_url": "https://rseng.github.io/software/api/repos/github/krab1k/ChargeFW2"}, {"uid": "github/mayuresh159/starsense_algorithms", "html_url": "https://rseng.github.io/software/repository/github/mayuresh159/starsense_algorithms", "api_url": "https://rseng.github.io/software/api/repos/github/mayuresh159/starsense_algorithms"}, {"uid": "github/erhard-lab/gedi", "html_url": "https://rseng.github.io/software/repository/github/erhard-lab/gedi", "api_url": "https://rseng.github.io/software/api/repos/github/erhard-lab/gedi"}, {"uid": "github/DedalusProject/eigentools", "html_url": "https://rseng.github.io/software/repository/github/DedalusProject/eigentools", "api_url": "https://rseng.github.io/software/api/repos/github/DedalusProject/eigentools"}, {"uid": "github/swagnercarena/ovejero", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/ovejero", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/ovejero"}, {"uid": "github/swagnercarena/paltas", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/paltas", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/paltas"}, {"uid": "github/bio-tools/biotoolsSum", "html_url": "https://rseng.github.io/software/repository/github/bio-tools/biotoolsSum", "api_url": "https://rseng.github.io/software/api/repos/github/bio-tools/biotoolsSum"}, {"uid": "github/pydemull/activAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/pydemull/activAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/pydemull/activAnalyzer"}, {"uid": "github/MLMI2-CSSI/foundry", "html_url": "https://rseng.github.io/software/repository/github/MLMI2-CSSI/foundry", "api_url": "https://rseng.github.io/software/api/repos/github/MLMI2-CSSI/foundry"}, {"uid": "github/qiime2/q2-vsearch", "html_url": "https://rseng.github.io/software/repository/github/qiime2/q2-vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/qiime2/q2-vsearch"}, {"uid": "github/exoclim/aeolus", "html_url": "https://rseng.github.io/software/repository/github/exoclim/aeolus", "api_url": "https://rseng.github.io/software/api/repos/github/exoclim/aeolus"}, {"uid": "github/julia-wrobel/registr", "html_url": "https://rseng.github.io/software/repository/github/julia-wrobel/registr", "api_url": "https://rseng.github.io/software/api/repos/github/julia-wrobel/registr"}, {"uid": "github/astroferreira/galclean", "html_url": "https://rseng.github.io/software/repository/github/astroferreira/galclean", "api_url": "https://rseng.github.io/software/api/repos/github/astroferreira/galclean"}, {"uid": "github/haotianteng/BoostNano", "html_url": "https://rseng.github.io/software/repository/github/haotianteng/BoostNano", "api_url": "https://rseng.github.io/software/api/repos/github/haotianteng/BoostNano"}, {"uid": "github/flekschas/jupyter-scatter", "html_url": "https://rseng.github.io/software/repository/github/flekschas/jupyter-scatter", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/jupyter-scatter"}, {"uid": "github/flekschas/regl-scatterplot", "html_url": "https://rseng.github.io/software/repository/github/flekschas/regl-scatterplot", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/regl-scatterplot"}, {"uid": "github/Sarc-Graph/sarcgraph", "html_url": "https://rseng.github.io/software/repository/github/Sarc-Graph/sarcgraph", "api_url": "https://rseng.github.io/software/api/repos/github/Sarc-Graph/sarcgraph"}, {"uid": "github/mmelwani/AccretR", "html_url": "https://rseng.github.io/software/repository/github/mmelwani/AccretR", "api_url": "https://rseng.github.io/software/api/repos/github/mmelwani/AccretR"}, {"uid": "github/LabTranslationalArchitectomics/riboWaltz", "html_url": "https://rseng.github.io/software/repository/github/LabTranslationalArchitectomics/riboWaltz", "api_url": "https://rseng.github.io/software/api/repos/github/LabTranslationalArchitectomics/riboWaltz"}, {"uid": "github/almost6heads/ConleyDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/almost6heads/ConleyDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/almost6heads/ConleyDynamics.jl"}, {"uid": "github/JacksonBurns/astartes", "html_url": "https://rseng.github.io/software/repository/github/JacksonBurns/astartes", "api_url": "https://rseng.github.io/software/api/repos/github/JacksonBurns/astartes"}, {"uid": "github/LandSciTech/ccviR", "html_url": "https://rseng.github.io/software/repository/github/LandSciTech/ccviR", "api_url": "https://rseng.github.io/software/api/repos/github/LandSciTech/ccviR"}, {"uid": "github/blind-contours/CVtreeMLE", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/CVtreeMLE", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/CVtreeMLE"}, {"uid": "github/blind-contours/SuperNOVA", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/SuperNOVA", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/SuperNOVA"}, {"uid": "github/abrupt-climate/hyper-canny", "html_url": "https://rseng.github.io/software/repository/github/abrupt-climate/hyper-canny", "api_url": "https://rseng.github.io/software/api/repos/github/abrupt-climate/hyper-canny"}, {"uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "html_url": "https://rseng.github.io/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "api_url": "https://rseng.github.io/software/api/repos/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever"}, {"uid": "github/matplotlib/matplotlib", "html_url": "https://rseng.github.io/software/repository/github/matplotlib/matplotlib", "api_url": "https://rseng.github.io/software/api/repos/github/matplotlib/matplotlib"}, {"uid": "github/Someone789/galax2d", "html_url": "https://rseng.github.io/software/repository/github/Someone789/galax2d", "api_url": "https://rseng.github.io/software/api/repos/github/Someone789/galax2d"}, {"uid": "github/florian-lienhard/MM-LSD", "html_url": "https://rseng.github.io/software/repository/github/florian-lienhard/MM-LSD", "api_url": "https://rseng.github.io/software/api/repos/github/florian-lienhard/MM-LSD"}, {"uid": "github/Professor-G/MicroLIA", "html_url": "https://rseng.github.io/software/repository/github/Professor-G/MicroLIA", "api_url": "https://rseng.github.io/software/api/repos/github/Professor-G/MicroLIA"}, {"uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/PyMOL-KVFinder-web-Tools"}, {"uid": "github/LBC-LNBio/pyKVFinder", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/pyKVFinder", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/pyKVFinder"}, {"uid": "github/LBC-LNBio/parKVFinder-win", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/parKVFinder-win", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/parKVFinder-win"}, {"uid": "github/nhejazi/medoutcon", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/medoutcon", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/medoutcon"}, {"uid": "github/nhejazi/txshift", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/txshift", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/txshift"}, {"uid": "github/nhejazi/haldensify", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/haldensify", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/haldensify"}, {"uid": "github/aneeshnaik/spam", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/spam", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/spam"}, {"uid": "github/aneeshnaik/lintsampler", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/lintsampler", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/lintsampler"}, {"uid": "github/djsutherland/py-sdm", "html_url": "https://rseng.github.io/software/repository/github/djsutherland/py-sdm", "api_url": "https://rseng.github.io/software/api/repos/github/djsutherland/py-sdm"}, {"uid": "github/astroumd/miriad", "html_url": "https://rseng.github.io/software/repository/github/astroumd/miriad", "api_url": "https://rseng.github.io/software/api/repos/github/astroumd/miriad"}, {"uid": "github/JFFleming/RCFV_Reader", "html_url": "https://rseng.github.io/software/repository/github/JFFleming/RCFV_Reader", "api_url": "https://rseng.github.io/software/api/repos/github/JFFleming/RCFV_Reader"}, {"uid": "github/brentp/gsort", "html_url": "https://rseng.github.io/software/repository/github/brentp/gsort", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/gsort"}, {"uid": "github/brentp/peddy", "html_url": "https://rseng.github.io/software/repository/github/brentp/peddy", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/peddy"}, {"uid": "github/brentp/vcfanno", "html_url": "https://rseng.github.io/software/repository/github/brentp/vcfanno", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/vcfanno"}, {"uid": "github/brentp/geneimpacts", "html_url": "https://rseng.github.io/software/repository/github/brentp/geneimpacts", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/geneimpacts"}, {"uid": "github/brentp/cyvcf2", "html_url": "https://rseng.github.io/software/repository/github/brentp/cyvcf2", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cyvcf2"}, {"uid": "github/brentp/cigar", "html_url": "https://rseng.github.io/software/repository/github/brentp/cigar", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cigar"}, {"uid": "github/brentp/somalier", "html_url": "https://rseng.github.io/software/repository/github/brentp/somalier", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/somalier"}, {"uid": "github/brentp/mosdepth", "html_url": "https://rseng.github.io/software/repository/github/brentp/mosdepth", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/mosdepth"}, {"uid": "github/brentp/hts-nim-tools", "html_url": "https://rseng.github.io/software/repository/github/brentp/hts-nim-tools", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/hts-nim-tools"}, {"uid": "github/brentp/kexpr-nim", "html_url": "https://rseng.github.io/software/repository/github/brentp/kexpr-nim", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/kexpr-nim"}, {"uid": "github/brentp/goleft", "html_url": "https://rseng.github.io/software/repository/github/brentp/goleft", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/goleft"}, {"uid": "github/brentp/smoove", "html_url": "https://rseng.github.io/software/repository/github/brentp/smoove", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/smoove"}, {"uid": "github/brentp/nim-lapper", "html_url": "https://rseng.github.io/software/repository/github/brentp/nim-lapper", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/nim-lapper"}, {"uid": "github/mdolab/pygeo", "html_url": "https://rseng.github.io/software/repository/github/mdolab/pygeo", "api_url": "https://rseng.github.io/software/api/repos/github/mdolab/pygeo"}, {"uid": "github/tibordome/cosmic_profiles", "html_url": "https://rseng.github.io/software/repository/github/tibordome/cosmic_profiles", "api_url": "https://rseng.github.io/software/api/repos/github/tibordome/cosmic_profiles"}, {"uid": "github/reneshbedre/bioinfokit", "html_url": "https://rseng.github.io/software/repository/github/reneshbedre/bioinfokit", "api_url": "https://rseng.github.io/software/api/repos/github/reneshbedre/bioinfokit"}, {"uid": "github/jbussemaker/SBArchOpt", "html_url": "https://rseng.github.io/software/repository/github/jbussemaker/SBArchOpt", "api_url": "https://rseng.github.io/software/api/repos/github/jbussemaker/SBArchOpt"}, {"uid": "github/PolymathicAI/AstroCLIP", "html_url": "https://rseng.github.io/software/repository/github/PolymathicAI/AstroCLIP", "api_url": "https://rseng.github.io/software/api/repos/github/PolymathicAI/AstroCLIP"}, {"uid": "github/HengyueZ/astrofix", "html_url": "https://rseng.github.io/software/repository/github/HengyueZ/astrofix", "api_url": "https://rseng.github.io/software/api/repos/github/HengyueZ/astrofix"}, {"uid": "github/qiangyicheng/flory", "html_url": "https://rseng.github.io/software/repository/github/qiangyicheng/flory", "api_url": "https://rseng.github.io/software/api/repos/github/qiangyicheng/flory"}, {"uid": "github/NathanSkene/EWCE", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/EWCE", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/EWCE"}, {"uid": "github/NathanSkene/MAGMA_Celltyping", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/MAGMA_Celltyping", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/MAGMA_Celltyping"}, {"uid": "github/jodyphelan/TBProfiler", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/TBProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/TBProfiler"}, {"uid": "github/jodyphelan/tb-ml", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/tb-ml", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/tb-ml"}, {"uid": "github/PNNL-m-q/mza", "html_url": "https://rseng.github.io/software/repository/github/PNNL-m-q/mza", "api_url": "https://rseng.github.io/software/api/repos/github/PNNL-m-q/mza"}, {"uid": "github/dsheward-astro/pynaple", "html_url": "https://rseng.github.io/software/repository/github/dsheward-astro/pynaple", "api_url": "https://rseng.github.io/software/api/repos/github/dsheward-astro/pynaple"}, {"uid": "github/fkiwy/Finder_charts", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/Finder_charts", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/Finder_charts"}, {"uid": "github/fkiwy/unTimely_Catalog_explorer", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/unTimely_Catalog_explorer", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/unTimely_Catalog_explorer"}, {"uid": "github/fkiwy/AstroToolBox", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/AstroToolBox", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/AstroToolBox"}, {"uid": "github/ExoplanetML/Nigraha", "html_url": "https://rseng.github.io/software/repository/github/ExoplanetML/Nigraha", "api_url": "https://rseng.github.io/software/api/repos/github/ExoplanetML/Nigraha"}, {"uid": "github/ConesaLab/MOSim", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MOSim", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MOSim"}, {"uid": "github/ConesaLab/MultiPower", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MultiPower", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MultiPower"}, {"uid": "github/ConesaLab/SQANTI3", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/SQANTI3", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/SQANTI3"}, {"uid": "github/GilbertLabUCSF/CanDI", "html_url": "https://rseng.github.io/software/repository/github/GilbertLabUCSF/CanDI", "api_url": "https://rseng.github.io/software/api/repos/github/GilbertLabUCSF/CanDI"}, {"uid": "github/alan-turing-institute/autoemulate", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/autoemulate", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/autoemulate"}, {"uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/monitoring-ecosystem-resilience"}, {"uid": "github/alan-turing-institute/DetectorChecker", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/DetectorChecker", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/DetectorChecker"}, {"uid": "github/alan-turing-institute/MLJ.jl", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/MLJ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/MLJ.jl"}, {"uid": "github/alan-turing-institute/Palaeoanalytics", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/Palaeoanalytics", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/Palaeoanalytics"}, {"uid": "github/alan-turing-institute/setvis", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/setvis", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/setvis"}, {"uid": "github/iquasere/UPIMAPI", "html_url": "https://rseng.github.io/software/repository/github/iquasere/UPIMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/iquasere/UPIMAPI"}, {"uid": "github/MillionConcepts/lhorizon", "html_url": "https://rseng.github.io/software/repository/github/MillionConcepts/lhorizon", "api_url": "https://rseng.github.io/software/api/repos/github/MillionConcepts/lhorizon"}, {"uid": "github/skypyproject/skypy", "html_url": "https://rseng.github.io/software/repository/github/skypyproject/skypy", "api_url": "https://rseng.github.io/software/api/repos/github/skypyproject/skypy"}, {"uid": "github/tommyau/bamclipper", "html_url": "https://rseng.github.io/software/repository/github/tommyau/bamclipper", "api_url": "https://rseng.github.io/software/api/repos/github/tommyau/bamclipper"}, {"uid": "github/CDCgov/BART-Survival", "html_url": "https://rseng.github.io/software/repository/github/CDCgov/BART-Survival", "api_url": "https://rseng.github.io/software/api/repos/github/CDCgov/BART-Survival"}, {"uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", "html_url": "https://rseng.github.io/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasEdwardRiley/xpsi-pre-transfer"}, {"uid": "github/wchenastro/Mosaic", "html_url": "https://rseng.github.io/software/repository/github/wchenastro/Mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/wchenastro/Mosaic"}, {"uid": "github/ELeeAstro/gCMCRT", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/gCMCRT", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/gCMCRT"}, {"uid": "github/ELeeAstro/mini_chem", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/mini_chem", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/mini_chem"}, {"uid": "github/Punzo/SlicerAstro", "html_url": "https://rseng.github.io/software/repository/github/Punzo/SlicerAstro", "api_url": "https://rseng.github.io/software/api/repos/github/Punzo/SlicerAstro"}, {"uid": "github/cistrome/MIRA", "html_url": "https://rseng.github.io/software/repository/github/cistrome/MIRA", "api_url": "https://rseng.github.io/software/api/repos/github/cistrome/MIRA"}, {"uid": "github/johnh2o2/cuvarbase", "html_url": "https://rseng.github.io/software/repository/github/johnh2o2/cuvarbase", "api_url": "https://rseng.github.io/software/api/repos/github/johnh2o2/cuvarbase"}, {"uid": "github/meinardmueller/synctoolbox", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/synctoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/synctoolbox"}, {"uid": "github/meinardmueller/libfmp", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/libfmp", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/libfmp"}, {"uid": "github/euclidlib/euclidlib", "html_url": "https://rseng.github.io/software/repository/github/euclidlib/euclidlib", "api_url": "https://rseng.github.io/software/api/repos/github/euclidlib/euclidlib"}, {"uid": "github/pierrehoudayer/RUBIS", "html_url": "https://rseng.github.io/software/repository/github/pierrehoudayer/RUBIS", "api_url": "https://rseng.github.io/software/api/repos/github/pierrehoudayer/RUBIS"}, {"uid": "github/zhanghe9704/tpsa_sym", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa_sym", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa_sym"}, {"uid": "github/zhanghe9704/tpsa", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa"}, {"uid": "github/nservant/HiC-Pro", "html_url": "https://rseng.github.io/software/repository/github/nservant/HiC-Pro", "api_url": "https://rseng.github.io/software/api/repos/github/nservant/HiC-Pro"}, {"uid": "github/bommert/stabm", "html_url": "https://rseng.github.io/software/repository/github/bommert/stabm", "api_url": "https://rseng.github.io/software/api/repos/github/bommert/stabm"}, {"uid": "github/lpantano/seqbuster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqbuster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqbuster"}, {"uid": "github/lpantano/seqcluster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqcluster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqcluster"}, {"uid": "github/jackmwolf/tehtuner", "html_url": "https://rseng.github.io/software/repository/github/jackmwolf/tehtuner", "api_url": "https://rseng.github.io/software/api/repos/github/jackmwolf/tehtuner"}, {"uid": "github/soedinglab/plass", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/plass", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/plass"}, {"uid": "github/soedinglab/metaeuk", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/metaeuk", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/metaeuk"}, {"uid": "github/soedinglab/mmseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/mmseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/mmseqs2"}, {"uid": "github/soedinglab/spacepharer", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/spacepharer", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/spacepharer"}, {"uid": "github/soedinglab/hh-suite", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/hh-suite", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/hh-suite"}, {"uid": "github/soedinglab/MMseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/MMseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/MMseqs2"}, {"uid": "github/nasa/KeplerPORTs", "html_url": "https://rseng.github.io/software/repository/github/nasa/KeplerPORTs", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/KeplerPORTs"}, {"uid": "github/nasa/Kamodo", "html_url": "https://rseng.github.io/software/repository/github/nasa/Kamodo", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/Kamodo"}, {"uid": "github/nasa/simupy-flight", "html_url": "https://rseng.github.io/software/repository/github/nasa/simupy-flight", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/simupy-flight"}, {"uid": "github/nasa/kepler-robovetter", "html_url": "https://rseng.github.io/software/repository/github/nasa/kepler-robovetter", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/kepler-robovetter"}, {"uid": "github/nasa/prog_models", "html_url": "https://rseng.github.io/software/repository/github/nasa/prog_models", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/prog_models"}, {"uid": "github/nasa/ncompare", "html_url": "https://rseng.github.io/software/repository/github/nasa/ncompare", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/ncompare"}, {"uid": "github/nasa/exoscene", "html_url": "https://rseng.github.io/software/repository/github/nasa/exoscene", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/exoscene"}, {"uid": "github/nasa/K2CE", "html_url": "https://rseng.github.io/software/repository/github/nasa/K2CE", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/K2CE"}, {"uid": "github/cwentland0/perform", "html_url": "https://rseng.github.io/software/repository/github/cwentland0/perform", "api_url": "https://rseng.github.io/software/api/repos/github/cwentland0/perform"}, {"uid": "github/thomasorb/orcs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orcs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orcs"}, {"uid": "github/thomasorb/orbs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orbs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orbs"}, {"uid": "github/aberer/RogueNaRok", "html_url": "https://rseng.github.io/software/repository/github/aberer/RogueNaRok", "api_url": "https://rseng.github.io/software/api/repos/github/aberer/RogueNaRok"}, {"uid": "github/chanzuckerberg/idseq-dag", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/idseq-dag", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/idseq-dag"}, {"uid": "github/chanzuckerberg/shasta", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/shasta", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/shasta"}, {"uid": "github/chanzuckerberg/cellxgene", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/cellxgene", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/cellxgene"}, {"uid": "github/lamyj/odil", "html_url": "https://rseng.github.io/software/repository/github/lamyj/odil", "api_url": "https://rseng.github.io/software/api/repos/github/lamyj/odil"}, {"uid": "github/CyclotronResearchCentre/bidsme", "html_url": "https://rseng.github.io/software/repository/github/CyclotronResearchCentre/bidsme", "api_url": "https://rseng.github.io/software/api/repos/github/CyclotronResearchCentre/bidsme"}, {"uid": "github/ccsosa/GOCompare", "html_url": "https://rseng.github.io/software/repository/github/ccsosa/GOCompare", "api_url": "https://rseng.github.io/software/api/repos/github/ccsosa/GOCompare"}, {"uid": "github/nationalparkservice/NPSdataverse", "html_url": "https://rseng.github.io/software/repository/github/nationalparkservice/NPSdataverse", "api_url": "https://rseng.github.io/software/api/repos/github/nationalparkservice/NPSdataverse"}, {"uid": "github/schochastics/graphlayouts", "html_url": "https://rseng.github.io/software/repository/github/schochastics/graphlayouts", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/graphlayouts"}, {"uid": "github/schochastics/signnet", "html_url": "https://rseng.github.io/software/repository/github/schochastics/signnet", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/signnet"}, {"uid": "github/schochastics/netrankr", "html_url": "https://rseng.github.io/software/repository/github/schochastics/netrankr", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/netrankr"}, {"uid": "github/RichardMoot/LinearOne", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/LinearOne", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/LinearOne"}, {"uid": "github/RichardMoot/GrailLight", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/GrailLight", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/GrailLight"}, {"uid": "github/RWTH-EBC/AixWeather", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixWeather", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixWeather"}, {"uid": "github/RWTH-EBC/districtgenerator", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/districtgenerator", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/districtgenerator"}, {"uid": "github/RWTH-EBC/AixCaliBuHA", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixCaliBuHA", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixCaliBuHA"}, {"uid": "github/RWTH-EBC/FiLiP", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/FiLiP", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/FiLiP"}, {"uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "html_url": "https://rseng.github.io/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "api_url": "https://rseng.github.io/software/api/repos/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-"}, {"uid": "github/LQYoLH/CnnCrispr", "html_url": "https://rseng.github.io/software/repository/github/LQYoLH/CnnCrispr", "api_url": "https://rseng.github.io/software/api/repos/github/LQYoLH/CnnCrispr"}, {"uid": "github/sid-krish/Rhometa_Full_Genome", "html_url": "https://rseng.github.io/software/repository/github/sid-krish/Rhometa_Full_Genome", "api_url": "https://rseng.github.io/software/api/repos/github/sid-krish/Rhometa_Full_Genome"}, {"uid": "github/cinemascience/cinema_snap", "html_url": "https://rseng.github.io/software/repository/github/cinemascience/cinema_snap", "api_url": "https://rseng.github.io/software/api/repos/github/cinemascience/cinema_snap"}, {"uid": "github/hsci-r/finnish-media-scrapers", "html_url": "https://rseng.github.io/software/repository/github/hsci-r/finnish-media-scrapers", "api_url": "https://rseng.github.io/software/api/repos/github/hsci-r/finnish-media-scrapers"}, {"uid": "github/mrteetoe/HOI", "html_url": "https://rseng.github.io/software/repository/github/mrteetoe/HOI", "api_url": "https://rseng.github.io/software/api/repos/github/mrteetoe/HOI"}, {"uid": "github/kanaverse/kana", "html_url": "https://rseng.github.io/software/repository/github/kanaverse/kana", "api_url": "https://rseng.github.io/software/api/repos/github/kanaverse/kana"}, {"uid": "github/emsig/elfe3D", "html_url": "https://rseng.github.io/software/repository/github/emsig/elfe3D", "api_url": "https://rseng.github.io/software/api/repos/github/emsig/elfe3D"}, {"uid": "github/pmelsted/pizzly", "html_url": "https://rseng.github.io/software/repository/github/pmelsted/pizzly", "api_url": "https://rseng.github.io/software/api/repos/github/pmelsted/pizzly"}, {"uid": "github/stermzsofi/TiDE", "html_url": "https://rseng.github.io/software/repository/github/stermzsofi/TiDE", "api_url": "https://rseng.github.io/software/api/repos/github/stermzsofi/TiDE"}, {"uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "html_url": "https://rseng.github.io/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "api_url": "https://rseng.github.io/software/api/repos/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images"}, {"uid": "github/dragontaoran/sleev", "html_url": "https://rseng.github.io/software/repository/github/dragontaoran/sleev", "api_url": "https://rseng.github.io/software/api/repos/github/dragontaoran/sleev"}, {"uid": "github/grimme-lab/xtb", "html_url": "https://rseng.github.io/software/repository/github/grimme-lab/xtb", "api_url": "https://rseng.github.io/software/api/repos/github/grimme-lab/xtb"}, {"uid": "github/rhernandvel/ViromeXplore", "html_url": "https://rseng.github.io/software/repository/github/rhernandvel/ViromeXplore", "api_url": "https://rseng.github.io/software/api/repos/github/rhernandvel/ViromeXplore"}, {"uid": "github/bbercovici/SBGAT", "html_url": "https://rseng.github.io/software/repository/github/bbercovici/SBGAT", "api_url": "https://rseng.github.io/software/api/repos/github/bbercovici/SBGAT"}, {"uid": "github/nadvornikjiri/HiSS-Cube", "html_url": "https://rseng.github.io/software/repository/github/nadvornikjiri/HiSS-Cube", "api_url": "https://rseng.github.io/software/api/repos/github/nadvornikjiri/HiSS-Cube"}, {"uid": "github/msm550/DMATIS", "html_url": "https://rseng.github.io/software/repository/github/msm550/DMATIS", "api_url": "https://rseng.github.io/software/api/repos/github/msm550/DMATIS"}, {"uid": "github/robynlm/sphereint", "html_url": "https://rseng.github.io/software/repository/github/robynlm/sphereint", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/sphereint"}, {"uid": "github/robynlm/ICPertFLRW", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ICPertFLRW", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ICPertFLRW"}, {"uid": "github/robynlm/ebweyl", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ebweyl", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ebweyl"}, {"uid": "github/JamesKirk11/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/JamesKirk11/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/JamesKirk11/Tiberius"}, {"uid": "github/SIOSlab/NEXO", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/NEXO", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/NEXO"}, {"uid": "github/SIOSlab/exodetbox", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/exodetbox", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/exodetbox"}, {"uid": "github/lmcinnes/umap", "html_url": "https://rseng.github.io/software/repository/github/lmcinnes/umap", "api_url": "https://rseng.github.io/software/api/repos/github/lmcinnes/umap"}, {"uid": "github/rordenlab/dcm2niix", "html_url": "https://rseng.github.io/software/repository/github/rordenlab/dcm2niix", "api_url": "https://rseng.github.io/software/api/repos/github/rordenlab/dcm2niix"}, {"uid": "github/mommermi/photometrypipeline", "html_url": "https://rseng.github.io/software/repository/github/mommermi/photometrypipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mommermi/photometrypipeline"}, {"uid": "github/pyBRAvo/pyBRAvo", "html_url": "https://rseng.github.io/software/repository/github/pyBRAvo/pyBRAvo", "api_url": "https://rseng.github.io/software/api/repos/github/pyBRAvo/pyBRAvo"}, {"uid": "github/kinleyid/tempodisco", "html_url": "https://rseng.github.io/software/repository/github/kinleyid/tempodisco", "api_url": "https://rseng.github.io/software/api/repos/github/kinleyid/tempodisco"}, {"uid": "github/MBoemo/DNAscent", "html_url": "https://rseng.github.io/software/repository/github/MBoemo/DNAscent", "api_url": "https://rseng.github.io/software/api/repos/github/MBoemo/DNAscent"}, {"uid": "github/fenderglass/Ragout", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Ragout", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Ragout"}, {"uid": "github/fenderglass/Flye", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Flye"}, {"uid": "github/philbull/RadioFisher", "html_url": "https://rseng.github.io/software/repository/github/philbull/RadioFisher", "api_url": "https://rseng.github.io/software/api/repos/github/philbull/RadioFisher"}, {"uid": "github/javicarron/pynkowski", "html_url": "https://rseng.github.io/software/repository/github/javicarron/pynkowski", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/pynkowski"}, {"uid": "github/javicarron/mtneedlet", "html_url": "https://rseng.github.io/software/repository/github/javicarron/mtneedlet", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/mtneedlet"}, {"uid": "github/karlotness/adrt", "html_url": "https://rseng.github.io/software/repository/github/karlotness/adrt", "api_url": "https://rseng.github.io/software/api/repos/github/karlotness/adrt"}, {"uid": "github/silx-kit/pyFAI", "html_url": "https://rseng.github.io/software/repository/github/silx-kit/pyFAI", "api_url": "https://rseng.github.io/software/api/repos/github/silx-kit/pyFAI"}, {"uid": "github/rust-bio/rust-bio-tools", "html_url": "https://rseng.github.io/software/repository/github/rust-bio/rust-bio-tools", "api_url": "https://rseng.github.io/software/api/repos/github/rust-bio/rust-bio-tools"}, {"uid": "github/davidebolo1993/TRiCoLOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/TRiCoLOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/TRiCoLOR"}, {"uid": "github/davidebolo1993/VISOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/VISOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/VISOR"}, {"uid": "github/GWang2022/iGDP", "html_url": "https://rseng.github.io/software/repository/github/GWang2022/iGDP", "api_url": "https://rseng.github.io/software/api/repos/github/GWang2022/iGDP"}, {"uid": "github/MannLabs/alphapept", "html_url": "https://rseng.github.io/software/repository/github/MannLabs/alphapept", "api_url": "https://rseng.github.io/software/api/repos/github/MannLabs/alphapept"}, {"uid": "github/chrishales/pieflag", "html_url": "https://rseng.github.io/software/repository/github/chrishales/pieflag", "api_url": "https://rseng.github.io/software/api/repos/github/chrishales/pieflag"}, {"uid": "github/aidenlab/juicer", "html_url": "https://rseng.github.io/software/repository/github/aidenlab/juicer", "api_url": "https://rseng.github.io/software/api/repos/github/aidenlab/juicer"}, {"uid": "github/Yida-Lin/libxdf", "html_url": "https://rseng.github.io/software/repository/github/Yida-Lin/libxdf", "api_url": "https://rseng.github.io/software/api/repos/github/Yida-Lin/libxdf"}, {"uid": "github/ChenYangyao/hipp", "html_url": "https://rseng.github.io/software/repository/github/ChenYangyao/hipp", "api_url": "https://rseng.github.io/software/api/repos/github/ChenYangyao/hipp"}, {"uid": "github/tripathi/Atmospheric-Athena", "html_url": "https://rseng.github.io/software/repository/github/tripathi/Atmospheric-Athena", "api_url": "https://rseng.github.io/software/api/repos/github/tripathi/Atmospheric-Athena"}, {"uid": "github/CFSAN-Biostatistics/SeroTools", "html_url": "https://rseng.github.io/software/repository/github/CFSAN-Biostatistics/SeroTools", "api_url": "https://rseng.github.io/software/api/repos/github/CFSAN-Biostatistics/SeroTools"}, {"uid": "github/qtltools/qtltools", "html_url": "https://rseng.github.io/software/repository/github/qtltools/qtltools", "api_url": "https://rseng.github.io/software/api/repos/github/qtltools/qtltools"}, {"uid": "github/guilledufort/EMVC-2", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EMVC-2", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EMVC-2"}, {"uid": "github/guilledufort/EnanoFASTQ", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EnanoFASTQ", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EnanoFASTQ"}, {"uid": "github/kim8517/RVSNUpy", "html_url": "https://rseng.github.io/software/repository/github/kim8517/RVSNUpy", "api_url": "https://rseng.github.io/software/api/repos/github/kim8517/RVSNUpy"}, {"uid": "github/Bonfanti88/MCMCI", "html_url": "https://rseng.github.io/software/repository/github/Bonfanti88/MCMCI", "api_url": "https://rseng.github.io/software/api/repos/github/Bonfanti88/MCMCI"}, {"uid": "github/flu-crew/smot", "html_url": "https://rseng.github.io/software/repository/github/flu-crew/smot", "api_url": "https://rseng.github.io/software/api/repos/github/flu-crew/smot"}, {"uid": "github/jdswinbank/Comet", "html_url": "https://rseng.github.io/software/repository/github/jdswinbank/Comet", "api_url": "https://rseng.github.io/software/api/repos/github/jdswinbank/Comet"}, {"uid": "github/jdhenshaw/SCOUSE", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/SCOUSE", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/SCOUSE"}, {"uid": "github/jdhenshaw/scousepy", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/scousepy", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/scousepy"}, {"uid": "github/jdhenshaw/acorns", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/acorns", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/acorns"}, {"uid": "github/MorgansLab/OSCILOS_Long", "html_url": "https://rseng.github.io/software/repository/github/MorgansLab/OSCILOS_Long", "api_url": "https://rseng.github.io/software/api/repos/github/MorgansLab/OSCILOS_Long"}, {"uid": "github/mengaldo/PySPOD", "html_url": "https://rseng.github.io/software/repository/github/mengaldo/PySPOD", "api_url": "https://rseng.github.io/software/api/repos/github/mengaldo/PySPOD"}, {"uid": "github/nh13/DWGSIM", "html_url": "https://rseng.github.io/software/repository/github/nh13/DWGSIM", "api_url": "https://rseng.github.io/software/api/repos/github/nh13/DWGSIM"}, {"uid": "github/atomneb/AtomNeb-py", "html_url": "https://rseng.github.io/software/repository/github/atomneb/AtomNeb-py", "api_url": "https://rseng.github.io/software/api/repos/github/atomneb/AtomNeb-py"}, {"uid": "github/Simthembile/cosmo-pipeline", "html_url": "https://rseng.github.io/software/repository/github/Simthembile/cosmo-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/Simthembile/cosmo-pipeline"}, {"uid": "github/marcelauliano/MitoHiFi", "html_url": "https://rseng.github.io/software/repository/github/marcelauliano/MitoHiFi", "api_url": "https://rseng.github.io/software/api/repos/github/marcelauliano/MitoHiFi"}, {"uid": "github/yuliadm/mixComp", "html_url": "https://rseng.github.io/software/repository/github/yuliadm/mixComp", "api_url": "https://rseng.github.io/software/api/repos/github/yuliadm/mixComp"}, {"uid": "github/AllenInstitute/bmtk", "html_url": "https://rseng.github.io/software/repository/github/AllenInstitute/bmtk", "api_url": "https://rseng.github.io/software/api/repos/github/AllenInstitute/bmtk"}, {"uid": "github/tcallister/autoregressive-bbh-inference", "html_url": "https://rseng.github.io/software/repository/github/tcallister/autoregressive-bbh-inference", "api_url": "https://rseng.github.io/software/api/repos/github/tcallister/autoregressive-bbh-inference"}, {"uid": "github/hposborn/MonoTools", "html_url": "https://rseng.github.io/software/repository/github/hposborn/MonoTools", "api_url": "https://rseng.github.io/software/api/repos/github/hposborn/MonoTools"}, {"uid": "github/RainthunderWYL/LoRD", "html_url": "https://rseng.github.io/software/repository/github/RainthunderWYL/LoRD", "api_url": "https://rseng.github.io/software/api/repos/github/RainthunderWYL/LoRD"}, {"uid": "github/ryokbys/nap", "html_url": "https://rseng.github.io/software/repository/github/ryokbys/nap", "api_url": "https://rseng.github.io/software/api/repos/github/ryokbys/nap"}, {"uid": "github/su2code/SU2", "html_url": "https://rseng.github.io/software/repository/github/su2code/SU2", "api_url": "https://rseng.github.io/software/api/repos/github/su2code/SU2"}, {"uid": "github/RitchieLab/hudson", "html_url": "https://rseng.github.io/software/repository/github/RitchieLab/hudson", "api_url": "https://rseng.github.io/software/api/repos/github/RitchieLab/hudson"}, {"uid": "github/ConnorDonegan/geostan", "html_url": "https://rseng.github.io/software/repository/github/ConnorDonegan/geostan", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorDonegan/geostan"}, {"uid": "github/epigenelabs/inmoose", "html_url": "https://rseng.github.io/software/repository/github/epigenelabs/inmoose", "api_url": "https://rseng.github.io/software/api/repos/github/epigenelabs/inmoose"}, {"uid": "github/neherlab/nextalign", "html_url": "https://rseng.github.io/software/repository/github/neherlab/nextalign", "api_url": "https://rseng.github.io/software/api/repos/github/neherlab/nextalign"}, {"uid": "github/fumi-github/omicwas", "html_url": "https://rseng.github.io/software/repository/github/fumi-github/omicwas", "api_url": "https://rseng.github.io/software/api/repos/github/fumi-github/omicwas"}, {"uid": "github/brsynth/rp2paths", "html_url": "https://rseng.github.io/software/repository/github/brsynth/rp2paths", "api_url": "https://rseng.github.io/software/api/repos/github/brsynth/rp2paths"}, {"uid": "github/jdber1/opendrop", "html_url": "https://rseng.github.io/software/repository/github/jdber1/opendrop", "api_url": "https://rseng.github.io/software/api/repos/github/jdber1/opendrop"}, {"uid": "github/ModellingWebLab/chaste-codegen", "html_url": "https://rseng.github.io/software/repository/github/ModellingWebLab/chaste-codegen", "api_url": "https://rseng.github.io/software/api/repos/github/ModellingWebLab/chaste-codegen"}, {"uid": "github/sap218/jabberwocky", "html_url": "https://rseng.github.io/software/repository/github/sap218/jabberwocky", "api_url": "https://rseng.github.io/software/api/repos/github/sap218/jabberwocky"}, {"uid": "github/franciscozorrilla/metaGEM", "html_url": "https://rseng.github.io/software/repository/github/franciscozorrilla/metaGEM", "api_url": "https://rseng.github.io/software/api/repos/github/franciscozorrilla/metaGEM"}, {"uid": "github/DHortaD/Lux", "html_url": "https://rseng.github.io/software/repository/github/DHortaD/Lux", "api_url": "https://rseng.github.io/software/api/repos/github/DHortaD/Lux"}, {"uid": "github/conda/conda-package-handling", "html_url": "https://rseng.github.io/software/repository/github/conda/conda-package-handling", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda-package-handling"}, {"uid": "github/conda/pycosat", "html_url": "https://rseng.github.io/software/repository/github/conda/pycosat", "api_url": "https://rseng.github.io/software/api/repos/github/conda/pycosat"}, {"uid": "github/conda/conda", "html_url": "https://rseng.github.io/software/repository/github/conda/conda", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda"}, {"uid": "github/Alcampopiano/hypothesize", "html_url": "https://rseng.github.io/software/repository/github/Alcampopiano/hypothesize", "api_url": "https://rseng.github.io/software/api/repos/github/Alcampopiano/hypothesize"}, {"uid": "github/adcameron/ffancy", "html_url": "https://rseng.github.io/software/repository/github/adcameron/ffancy", "api_url": "https://rseng.github.io/software/api/repos/github/adcameron/ffancy"}, {"uid": "github/LBNL-ETA/MSWH", "html_url": "https://rseng.github.io/software/repository/github/LBNL-ETA/MSWH", "api_url": "https://rseng.github.io/software/api/repos/github/LBNL-ETA/MSWH"}, {"uid": "github/tramarobin/fctSPM", "html_url": "https://rseng.github.io/software/repository/github/tramarobin/fctSPM", "api_url": "https://rseng.github.io/software/api/repos/github/tramarobin/fctSPM"}, {"uid": "github/tidymodels/stacks", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/stacks", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/stacks"}, {"uid": "github/tidymodels/infer", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/infer", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/infer"}, {"uid": "github/sirocco-rt/sirocco", "html_url": "https://rseng.github.io/software/repository/github/sirocco-rt/sirocco", "api_url": "https://rseng.github.io/software/api/repos/github/sirocco-rt/sirocco"}, {"uid": "github/dtcc-platform/dtcc-builder", "html_url": "https://rseng.github.io/software/repository/github/dtcc-platform/dtcc-builder", "api_url": "https://rseng.github.io/software/api/repos/github/dtcc-platform/dtcc-builder"}, {"uid": "github/kpenev/poet", "html_url": "https://rseng.github.io/software/repository/github/kpenev/poet", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/poet"}, {"uid": "github/kpenev/AstroWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AstroWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AstroWISP"}, {"uid": "github/kpenev/AutoWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AutoWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AutoWISP"}, {"uid": "github/fogellab/multiWGCNA", "html_url": "https://rseng.github.io/software/repository/github/fogellab/multiWGCNA", "api_url": "https://rseng.github.io/software/api/repos/github/fogellab/multiWGCNA"}, {"uid": "github/ExeClim/Isca", "html_url": "https://rseng.github.io/software/repository/github/ExeClim/Isca", "api_url": "https://rseng.github.io/software/api/repos/github/ExeClim/Isca"}, {"uid": "github/ethicsai/ethical-smart-grid", "html_url": "https://rseng.github.io/software/repository/github/ethicsai/ethical-smart-grid", "api_url": "https://rseng.github.io/software/api/repos/github/ethicsai/ethical-smart-grid"}, {"uid": "github/kpicteam/kpic_pipeline", "html_url": "https://rseng.github.io/software/repository/github/kpicteam/kpic_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/kpicteam/kpic_pipeline"}, {"uid": "github/ZhantianXu/PISAD", "html_url": "https://rseng.github.io/software/repository/github/ZhantianXu/PISAD", "api_url": "https://rseng.github.io/software/api/repos/github/ZhantianXu/PISAD"}, {"uid": "github/braindatalab/PyBispectra", "html_url": "https://rseng.github.io/software/repository/github/braindatalab/PyBispectra", "api_url": "https://rseng.github.io/software/api/repos/github/braindatalab/PyBispectra"}, {"uid": "github/ESMValGroup/ESMValCore", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValCore", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValCore"}, {"uid": "github/ESMValGroup/ESMValTool", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValTool", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValTool"}, {"uid": "github/c-white/blacklight", "html_url": "https://rseng.github.io/software/repository/github/c-white/blacklight", "api_url": "https://rseng.github.io/software/api/repos/github/c-white/blacklight"}, {"uid": "github/LondonBiofoundry/basicsynbio", "html_url": "https://rseng.github.io/software/repository/github/LondonBiofoundry/basicsynbio", "api_url": "https://rseng.github.io/software/api/repos/github/LondonBiofoundry/basicsynbio"}, {"uid": "github/ggciag/mandyoc", "html_url": "https://rseng.github.io/software/repository/github/ggciag/mandyoc", "api_url": "https://rseng.github.io/software/api/repos/github/ggciag/mandyoc"}, {"uid": "github/rahil-makadia/grss", "html_url": "https://rseng.github.io/software/repository/github/rahil-makadia/grss", "api_url": "https://rseng.github.io/software/api/repos/github/rahil-makadia/grss"}, {"uid": "github/Romea/romea-ros2-lidar", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-lidar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-lidar"}, {"uid": "github/Romea/romea-core-filtering", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-filtering", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-filtering"}, {"uid": "github/Romea/adap2e", "html_url": "https://rseng.github.io/software/repository/github/Romea/adap2e", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/adap2e"}, {"uid": "github/Romea/alpo", "html_url": "https://rseng.github.io/software/repository/github/Romea/alpo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/alpo"}, {"uid": "github/Romea/romea-ros2-teleop", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-teleop", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-teleop"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-core-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-imu"}, {"uid": "github/Romea/romea-ros2-cmd-mux", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-cmd-mux", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-cmd-mux"}, {"uid": "github/Romea/romea-ros2-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-camera"}, {"uid": "github/Romea/romea-ros2-localisation-utils", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-localisation-utils", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-localisation-utils"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-core"}, {"uid": "github/Romea/romea-ros2-mobile-base", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-mobile-base", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-mobile-base"}, {"uid": "github/Romea/husky", "html_url": "https://rseng.github.io/software/repository/github/Romea/husky", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/husky"}, {"uid": "github/Romea/hunter", "html_url": "https://rseng.github.io/software/repository/github/Romea/hunter", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/hunter"}, {"uid": "github/Romea/scout", "html_url": "https://rseng.github.io/software/repository/github/Romea/scout", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/scout"}, {"uid": "github/Romea/romea-ros2-stereo-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-stereo-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-stereo-camera"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-core"}, {"uid": "github/Romea/romea-core-rtls", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-rtls", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-rtls"}, {"uid": "github/Romea/romea-core-localisation-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-localisation-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-localisation-gps"}, {"uid": "github/Romea/romea-ros2-joy", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-joy", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-joy"}, {"uid": "github/Romea/cinteo", "html_url": "https://rseng.github.io/software/repository/github/Romea/cinteo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/cinteo"}, {"uid": "github/Romea/romea-core-path", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-path", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-path"}, {"uid": "github/Romea/romea-core-common", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-common", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-common"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-gps"}, {"uid": "github/Romea/romea-ros2-rgbd-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-rgbd-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-rgbd-camera"}, {"uid": "github/Romea/romea-ros2-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-imu"}, {"uid": "github/Romea/aroco", "html_url": "https://rseng.github.io/software/repository/github/Romea/aroco", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/aroco"}, {"uid": "github/Romea/romea-core-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-gps"}, {"uid": "github/Romea/robucar", "html_url": "https://rseng.github.io/software/repository/github/Romea/robucar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/robucar"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-core"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin"}, {"uid": "github/smaret/thindisk", "html_url": "https://rseng.github.io/software/repository/github/smaret/thindisk", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/thindisk"}, {"uid": "github/smaret/astrochem", "html_url": "https://rseng.github.io/software/repository/github/smaret/astrochem", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/astrochem"}, {"uid": "github/adigenova/wengan", "html_url": "https://rseng.github.io/software/repository/github/adigenova/wengan", "api_url": "https://rseng.github.io/software/api/repos/github/adigenova/wengan"}, {"uid": "github/christopherburke/tess-point", "html_url": "https://rseng.github.io/software/repository/github/christopherburke/tess-point", "api_url": "https://rseng.github.io/software/api/repos/github/christopherburke/tess-point"}, {"uid": "github/nabeelre/NIMBLE", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/NIMBLE", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/NIMBLE"}, {"uid": "github/nabeelre/BTSbot", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/BTSbot", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/BTSbot"}, {"uid": "github/TommyJones/tidylda", "html_url": "https://rseng.github.io/software/repository/github/TommyJones/tidylda", "api_url": "https://rseng.github.io/software/api/repos/github/TommyJones/tidylda"}, {"uid": "github/pudeIko/piva", "html_url": "https://rseng.github.io/software/repository/github/pudeIko/piva", "api_url": "https://rseng.github.io/software/api/repos/github/pudeIko/piva"}, {"uid": "github/milanofthe/pathsim", "html_url": "https://rseng.github.io/software/repository/github/milanofthe/pathsim", "api_url": "https://rseng.github.io/software/api/repos/github/milanofthe/pathsim"}, {"uid": "github/cosimameyer/overviewR", "html_url": "https://rseng.github.io/software/repository/github/cosimameyer/overviewR", "api_url": "https://rseng.github.io/software/api/repos/github/cosimameyer/overviewR"}, {"uid": "github/Acellera/htmd", "html_url": "https://rseng.github.io/software/repository/github/Acellera/htmd", "api_url": "https://rseng.github.io/software/api/repos/github/Acellera/htmd"}, {"uid": "github/jan-orkisz/colume", "html_url": "https://rseng.github.io/software/repository/github/jan-orkisz/colume", "api_url": "https://rseng.github.io/software/api/repos/github/jan-orkisz/colume"}, {"uid": "github/naonori/hitomi", "html_url": "https://rseng.github.io/software/repository/github/naonori/hitomi", "api_url": "https://rseng.github.io/software/api/repos/github/naonori/hitomi"}, {"uid": "github/gerthmicha/wolbachia-mlst", "html_url": "https://rseng.github.io/software/repository/github/gerthmicha/wolbachia-mlst", "api_url": "https://rseng.github.io/software/api/repos/github/gerthmicha/wolbachia-mlst"}, {"uid": "github/tkchafin/autostreamtree", "html_url": "https://rseng.github.io/software/repository/github/tkchafin/autostreamtree", "api_url": "https://rseng.github.io/software/api/repos/github/tkchafin/autostreamtree"}, {"uid": "github/PTsolvers/JustRelax.jl", "html_url": "https://rseng.github.io/software/repository/github/PTsolvers/JustRelax.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PTsolvers/JustRelax.jl"}, {"uid": "github/viromelab/tracespipe", "html_url": "https://rseng.github.io/software/repository/github/viromelab/tracespipe", "api_url": "https://rseng.github.io/software/api/repos/github/viromelab/tracespipe"}, {"uid": "github/barnabytprowe/imcom", "html_url": "https://rseng.github.io/software/repository/github/barnabytprowe/imcom", "api_url": "https://rseng.github.io/software/api/repos/github/barnabytprowe/imcom"}, {"uid": "github/JelfsMaterialsGroup/stk", "html_url": "https://rseng.github.io/software/repository/github/JelfsMaterialsGroup/stk", "api_url": "https://rseng.github.io/software/api/repos/github/JelfsMaterialsGroup/stk"}, {"uid": "github/online-ml/deep-river", "html_url": "https://rseng.github.io/software/repository/github/online-ml/deep-river", "api_url": "https://rseng.github.io/software/api/repos/github/online-ml/deep-river"}, {"uid": "github/RemoteSensingTools/vSmartMOM.jl", "html_url": "https://rseng.github.io/software/repository/github/RemoteSensingTools/vSmartMOM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RemoteSensingTools/vSmartMOM.jl"}, {"uid": "github/nworbde/dStar", "html_url": "https://rseng.github.io/software/repository/github/nworbde/dStar", "api_url": "https://rseng.github.io/software/api/repos/github/nworbde/dStar"}, {"uid": "github/ECP-WarpX/WarpX", "html_url": "https://rseng.github.io/software/repository/github/ECP-WarpX/WarpX", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-WarpX/WarpX"}, {"uid": "github/pipliggins/EVolve", "html_url": "https://rseng.github.io/software/repository/github/pipliggins/EVolve", "api_url": "https://rseng.github.io/software/api/repos/github/pipliggins/EVolve"}, {"uid": "github/NLeSC/xenon-flow", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-flow", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-flow"}, {"uid": "github/NLeSC/eEcology-Annotation-WS", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Annotation-WS", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Annotation-WS"}, {"uid": "github/NLeSC/DiVE", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/DiVE", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/DiVE"}, {"uid": "github/NLeSC/nlesc-serverless-boilerplate", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/nlesc-serverless-boilerplate", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/nlesc-serverless-boilerplate"}, {"uid": "github/NLeSC/SalientDetector-python", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-python", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-python"}, {"uid": "github/NLeSC/eAstroViz", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eAstroViz", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eAstroViz"}, {"uid": "github/NLeSC/structure-from-motion", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/structure-from-motion", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/structure-from-motion"}, {"uid": "github/NLeSC/baklava", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/baklava", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/baklava"}, {"uid": "github/NLeSC/SalientDetector-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-matlab"}, {"uid": "github/NLeSC/pycoeman", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pycoeman", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pycoeman"}, {"uid": "github/NLeSC/spot", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/spot", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/spot"}, {"uid": "github/NLeSC/PattyAnalytics", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyAnalytics"}, {"uid": "github/NLeSC/ahn-pointcloud-viewer-ws", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ahn-pointcloud-viewer-ws"}, {"uid": "github/NLeSC/UncertaintyVisualization", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/UncertaintyVisualization", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/UncertaintyVisualization"}, {"uid": "github/NLeSC/python-template", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-template", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-template"}, {"uid": "github/NLeSC/eEcology-Classification", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Classification", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Classification"}, {"uid": "github/NLeSC/eEcology-script-wrapper", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-script-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-script-wrapper"}, {"uid": "github/NLeSC/eEcology-SMS-reciever", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-SMS-reciever", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-SMS-reciever"}, {"uid": "github/NLeSC/xenon-grpc", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-grpc"}, {"uid": "github/NLeSC/MAGMa", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/MAGMa", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/MAGMa"}, {"uid": "github/NLeSC/cptm", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/cptm", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/cptm"}, {"uid": "github/NLeSC/eSalsa-MPI", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eSalsa-MPI", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eSalsa-MPI"}, {"uid": "github/NLeSC/lokum", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/lokum", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/lokum"}, {"uid": "github/NLeSC/docker-couch-admin", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/docker-couch-admin", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/docker-couch-admin"}, {"uid": "github/NLeSC/python-pcl", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-pcl", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-pcl"}, {"uid": "github/NLeSC/mcfly", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/mcfly", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/mcfly"}, {"uid": "github/NLeSC/compressing-the-sky", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/compressing-the-sky", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/compressing-the-sky"}, {"uid": "github/NLeSC/OCTSegmentation", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/OCTSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/OCTSegmentation"}, {"uid": "github/NLeSC/root-conda-recipes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/root-conda-recipes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/root-conda-recipes"}, {"uid": "github/NLeSC/noodles", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/noodles", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/noodles"}, {"uid": "github/NLeSC/osmium", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/osmium", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/osmium"}, {"uid": "github/NLeSC/case-law-app", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/case-law-app", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/case-law-app"}, {"uid": "github/NLeSC/esibayes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/esibayes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/esibayes"}, {"uid": "github/NLeSC/ShiCo", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ShiCo", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ShiCo"}, {"uid": "github/NLeSC/boatswain", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/boatswain", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/boatswain"}, {"uid": "github/NLeSC/SalientDescriptor-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDescriptor-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDescriptor-matlab"}, {"uid": "github/NLeSC/Massive-PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Massive-PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Massive-PotreeConverter"}, {"uid": "github/NLeSC/Chemical-Analytics-Platform", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Chemical-Analytics-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Chemical-Analytics-Platform"}, {"uid": "github/NLeSC/fairdatapoint", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/fairdatapoint", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/fairdatapoint"}, {"uid": "github/NLeSC/hadrianus-scripts", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/hadrianus-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/hadrianus-scripts"}, {"uid": "github/NLeSC/EEG-epilepsy-diagnosis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/EEG-epilepsy-diagnosis"}, {"uid": "github/NLeSC/ExtJS-DateTime", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ExtJS-DateTime", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ExtJS-DateTime"}, {"uid": "github/NLeSC/xenon-cli", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-cli", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-cli"}, {"uid": "github/NLeSC/pattyvis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pattyvis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pattyvis"}, {"uid": "github/NLeSC/PattyData", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyData", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyData"}, {"uid": "github/NLeSC/xtas", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xtas", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xtas"}, {"uid": "github/NLeSC/litstudy", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/litstudy", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/litstudy"}, {"uid": "github/dlakaplan/pulsarsurveyscraper", "html_url": "https://rseng.github.io/software/repository/github/dlakaplan/pulsarsurveyscraper", "api_url": "https://rseng.github.io/software/api/repos/github/dlakaplan/pulsarsurveyscraper"}, {"uid": "github/Sudaraka88/LDWeaver", "html_url": "https://rseng.github.io/software/repository/github/Sudaraka88/LDWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/Sudaraka88/LDWeaver"}, {"uid": "github/simon-prunet/defringe", "html_url": "https://rseng.github.io/software/repository/github/simon-prunet/defringe", "api_url": "https://rseng.github.io/software/api/repos/github/simon-prunet/defringe"}, {"uid": "github/bc3LC/gcamreport", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/gcamreport", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/gcamreport"}, {"uid": "github/bc3LC/medusa", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/medusa"}, {"uid": "github/bc3LC/rhap", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/rhap", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/rhap"}, {"uid": "github/copasi/basico", "html_url": "https://rseng.github.io/software/repository/github/copasi/basico", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/basico"}, {"uid": "github/copasi/COPASI", "html_url": "https://rseng.github.io/software/repository/github/copasi/COPASI", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/COPASI"}, {"uid": "github/dengzhuo-AI/Real-Fundus", "html_url": "https://rseng.github.io/software/repository/github/dengzhuo-AI/Real-Fundus", "api_url": "https://rseng.github.io/software/api/repos/github/dengzhuo-AI/Real-Fundus"}, {"uid": "github/tholoien/XDGMM", "html_url": "https://rseng.github.io/software/repository/github/tholoien/XDGMM", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/XDGMM"}, {"uid": "github/tholoien/empiriciSN", "html_url": "https://rseng.github.io/software/repository/github/tholoien/empiriciSN", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/empiriciSN"}, {"uid": "github/stefanhiemer/topoptlab", "html_url": "https://rseng.github.io/software/repository/github/stefanhiemer/topoptlab", "api_url": "https://rseng.github.io/software/api/repos/github/stefanhiemer/topoptlab"}, {"uid": "github/fmihpc/analysator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/analysator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/analysator"}, {"uid": "github/fmihpc/vlasiator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/vlasiator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/vlasiator"}, {"uid": "github/migueldvb/cine", "html_url": "https://rseng.github.io/software/repository/github/migueldvb/cine", "api_url": "https://rseng.github.io/software/api/repos/github/migueldvb/cine"}, {"uid": "github/metagentools/gbintk", "html_url": "https://rseng.github.io/software/repository/github/metagentools/gbintk", "api_url": "https://rseng.github.io/software/api/repos/github/metagentools/gbintk"}, {"uid": "github/helonghuangastro/exolyn", "html_url": "https://rseng.github.io/software/repository/github/helonghuangastro/exolyn", "api_url": "https://rseng.github.io/software/api/repos/github/helonghuangastro/exolyn"}, {"uid": "github/kemasuda/jnkepler", "html_url": "https://rseng.github.io/software/repository/github/kemasuda/jnkepler", "api_url": "https://rseng.github.io/software/api/repos/github/kemasuda/jnkepler"}, {"uid": "github/cmateu/galstreams", "html_url": "https://rseng.github.io/software/repository/github/cmateu/galstreams", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/galstreams"}, {"uid": "github/cmateu/PyMGC3", "html_url": "https://rseng.github.io/software/repository/github/cmateu/PyMGC3", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/PyMGC3"}, {"uid": "github/weizhongli/cdhit", "html_url": "https://rseng.github.io/software/repository/github/weizhongli/cdhit", "api_url": "https://rseng.github.io/software/api/repos/github/weizhongli/cdhit"}, {"uid": "github/eweitz/ideogram", "html_url": "https://rseng.github.io/software/repository/github/eweitz/ideogram", "api_url": "https://rseng.github.io/software/api/repos/github/eweitz/ideogram"}, {"uid": "github/skendrew/milkywayproject_triggering", "html_url": "https://rseng.github.io/software/repository/github/skendrew/milkywayproject_triggering", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/milkywayproject_triggering"}, {"uid": "github/skendrew/midIR_sensitivity", "html_url": "https://rseng.github.io/software/repository/github/skendrew/midIR_sensitivity", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/midIR_sensitivity"}, {"uid": "github/ihrke/pypillometry", "html_url": "https://rseng.github.io/software/repository/github/ihrke/pypillometry", "api_url": "https://rseng.github.io/software/api/repos/github/ihrke/pypillometry"}, {"uid": "github/C0PEP0D/otto", "html_url": "https://rseng.github.io/software/repository/github/C0PEP0D/otto", "api_url": "https://rseng.github.io/software/api/repos/github/C0PEP0D/otto"}, {"uid": "github/afeinstein20/eleanor", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/eleanor", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/eleanor"}, {"uid": "github/afeinstein20/stella", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/stella", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/stella"}, {"uid": "github/NMBU-Data-Science/RENT", "html_url": "https://rseng.github.io/software/repository/github/NMBU-Data-Science/RENT", "api_url": "https://rseng.github.io/software/api/repos/github/NMBU-Data-Science/RENT"}, {"uid": "github/ntoles/tristan-mp-pitp", "html_url": "https://rseng.github.io/software/repository/github/ntoles/tristan-mp-pitp", "api_url": "https://rseng.github.io/software/api/repos/github/ntoles/tristan-mp-pitp"}, {"uid": "github/phac-nml/mob-suite", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/mob-suite", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/mob-suite"}, {"uid": "github/phac-nml/biohansel", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/biohansel", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/biohansel"}, {"uid": "github/phac-nml/staramr", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/staramr", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/staramr"}, {"uid": "github/TBLabFJD/VariantCallingFJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/VariantCallingFJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/VariantCallingFJD"}, {"uid": "github/TBLabFJD/WHALE", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/WHALE", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/WHALE"}, {"uid": "github/TBLabFJD/DBofAFs", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/DBofAFs", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/DBofAFs"}, {"uid": "github/TBLabFJD/PARROT-FJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/PARROT-FJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/PARROT-FJD"}, {"uid": "github/GammaCascade/GCascade", "html_url": "https://rseng.github.io/software/repository/github/GammaCascade/GCascade", "api_url": "https://rseng.github.io/software/api/repos/github/GammaCascade/GCascade"}, {"uid": "github/MintonGroup/swiftest", "html_url": "https://rseng.github.io/software/repository/github/MintonGroup/swiftest", "api_url": "https://rseng.github.io/software/api/repos/github/MintonGroup/swiftest"}, {"uid": "github/giswqs/lidar", "html_url": "https://rseng.github.io/software/repository/github/giswqs/lidar", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/lidar"}, {"uid": "github/giswqs/geemap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/geemap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/geemap"}, {"uid": "github/giswqs/leafmap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/leafmap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/leafmap"}, {"uid": "github/retostauffer/python-colorspace", "html_url": "https://rseng.github.io/software/repository/github/retostauffer/python-colorspace", "api_url": "https://rseng.github.io/software/api/repos/github/retostauffer/python-colorspace"}, {"uid": "github/COSIMA/regional-mom6", "html_url": "https://rseng.github.io/software/repository/github/COSIMA/regional-mom6", "api_url": "https://rseng.github.io/software/api/repos/github/COSIMA/regional-mom6"}, {"uid": "github/mirapy-org/mirapy", "html_url": "https://rseng.github.io/software/repository/github/mirapy-org/mirapy", "api_url": "https://rseng.github.io/software/api/repos/github/mirapy-org/mirapy"}, {"uid": "github/ixkael/QuickSip", "html_url": "https://rseng.github.io/software/repository/github/ixkael/QuickSip", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/QuickSip"}, {"uid": "github/ixkael/Delight", "html_url": "https://rseng.github.io/software/repository/github/ixkael/Delight", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/Delight"}, {"uid": "github/ixkael/3DEX", "html_url": "https://rseng.github.io/software/repository/github/ixkael/3DEX", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/3DEX"}, {"uid": "github/synthpop-galaxy/synthpop", "html_url": "https://rseng.github.io/software/repository/github/synthpop-galaxy/synthpop", "api_url": "https://rseng.github.io/software/api/repos/github/synthpop-galaxy/synthpop"}, {"uid": "github/dalya/WeirdestGalaxies", "html_url": "https://rseng.github.io/software/repository/github/dalya/WeirdestGalaxies", "api_url": "https://rseng.github.io/software/api/repos/github/dalya/WeirdestGalaxies"}, {"uid": "github/hypre-space/hypredrive", "html_url": "https://rseng.github.io/software/repository/github/hypre-space/hypredrive", "api_url": "https://rseng.github.io/software/api/repos/github/hypre-space/hypredrive"}, {"uid": "github/nathanael-fijalkow/DeepSynth", "html_url": "https://rseng.github.io/software/repository/github/nathanael-fijalkow/DeepSynth", "api_url": "https://rseng.github.io/software/api/repos/github/nathanael-fijalkow/DeepSynth"}, {"uid": "github/KeckObservatory/tilsotua", "html_url": "https://rseng.github.io/software/repository/github/KeckObservatory/tilsotua", "api_url": "https://rseng.github.io/software/api/repos/github/KeckObservatory/tilsotua"}, {"uid": "github/jarvist/Julia-Phonons", "html_url": "https://rseng.github.io/software/repository/github/jarvist/Julia-Phonons", "api_url": "https://rseng.github.io/software/api/repos/github/jarvist/Julia-Phonons"}, {"uid": "github/felixbur/nkululeko", "html_url": "https://rseng.github.io/software/repository/github/felixbur/nkululeko", "api_url": "https://rseng.github.io/software/api/repos/github/felixbur/nkululeko"}, {"uid": "github/mr-superonion/FPFS", "html_url": "https://rseng.github.io/software/repository/github/mr-superonion/FPFS", "api_url": "https://rseng.github.io/software/api/repos/github/mr-superonion/FPFS"}, {"uid": "github/bricoletc/delfies", "html_url": "https://rseng.github.io/software/repository/github/bricoletc/delfies", "api_url": "https://rseng.github.io/software/api/repos/github/bricoletc/delfies"}, {"uid": "github/ptaconet/modisfast", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/modisfast", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/modisfast"}, {"uid": "github/ptaconet/bdd_rntaaf", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/bdd_rntaaf", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/bdd_rntaaf"}, {"uid": "github/shahmoradi/grb_world", "html_url": "https://rseng.github.io/software/repository/github/shahmoradi/grb_world", "api_url": "https://rseng.github.io/software/api/repos/github/shahmoradi/grb_world"}, {"uid": "github/Valcin/BE_HaPPy", "html_url": "https://rseng.github.io/software/repository/github/Valcin/BE_HaPPy", "api_url": "https://rseng.github.io/software/api/repos/github/Valcin/BE_HaPPy"}, {"uid": "github/jonotuke/BREADR", "html_url": "https://rseng.github.io/software/repository/github/jonotuke/BREADR", "api_url": "https://rseng.github.io/software/api/repos/github/jonotuke/BREADR"}, {"uid": "github/PolymerGuy/recolo", "html_url": "https://rseng.github.io/software/repository/github/PolymerGuy/recolo", "api_url": "https://rseng.github.io/software/api/repos/github/PolymerGuy/recolo"}, {"uid": "github/mbejger/polgraw-allsky", "html_url": "https://rseng.github.io/software/repository/github/mbejger/polgraw-allsky", "api_url": "https://rseng.github.io/software/api/repos/github/mbejger/polgraw-allsky"}, {"uid": "github/Fenyutanchan/solar-vSI", "html_url": "https://rseng.github.io/software/repository/github/Fenyutanchan/solar-vSI", "api_url": "https://rseng.github.io/software/api/repos/github/Fenyutanchan/solar-vSI"}, {"uid": "github/GenomePathogenAnalysisService/read-it-and-keep", "html_url": "https://rseng.github.io/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", "api_url": "https://rseng.github.io/software/api/repos/github/GenomePathogenAnalysisService/read-it-and-keep"}, {"uid": "github/vimc/vaultr", "html_url": "https://rseng.github.io/software/repository/github/vimc/vaultr", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/vaultr"}, {"uid": "github/vimc/orderly", "html_url": "https://rseng.github.io/software/repository/github/vimc/orderly", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/orderly"}, {"uid": "github/vimc/dettl", "html_url": "https://rseng.github.io/software/repository/github/vimc/dettl", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/dettl"}, {"uid": "github/luizfelippesr/galmag", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/galmag", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/galmag"}, {"uid": "github/luizfelippesr/magnetizer", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/magnetizer", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/magnetizer"}, {"uid": "github/iAART/aart", "html_url": "https://rseng.github.io/software/repository/github/iAART/aart", "api_url": "https://rseng.github.io/software/api/repos/github/iAART/aart"}, {"uid": "github/babinyurii/recan", "html_url": "https://rseng.github.io/software/repository/github/babinyurii/recan", "api_url": "https://rseng.github.io/software/api/repos/github/babinyurii/recan"}, {"uid": "github/CExA-project/ddc", "html_url": "https://rseng.github.io/software/repository/github/CExA-project/ddc", "api_url": "https://rseng.github.io/software/api/repos/github/CExA-project/ddc"}, {"uid": "github/nickfarrow/GalacticDNSMass", "html_url": "https://rseng.github.io/software/repository/github/nickfarrow/GalacticDNSMass", "api_url": "https://rseng.github.io/software/api/repos/github/nickfarrow/GalacticDNSMass"}, {"uid": "github/PabloMSanAla/fabada", "html_url": "https://rseng.github.io/software/repository/github/PabloMSanAla/fabada", "api_url": "https://rseng.github.io/software/api/repos/github/PabloMSanAla/fabada"}, {"uid": "github/cnellington/Contextualized", "html_url": "https://rseng.github.io/software/repository/github/cnellington/Contextualized", "api_url": "https://rseng.github.io/software/api/repos/github/cnellington/Contextualized"}, {"uid": "github/MIC-DKFZ/HD-BET", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/HD-BET", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/HD-BET"}, {"uid": "github/MIC-DKFZ/TractSeg", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/TractSeg", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/TractSeg"}, {"uid": "github/NathanSandford/Chem-I-Calc", "html_url": "https://rseng.github.io/software/repository/github/NathanSandford/Chem-I-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSandford/Chem-I-Calc"}, {"uid": "github/glis-glis/loci", "html_url": "https://rseng.github.io/software/repository/github/glis-glis/loci", "api_url": "https://rseng.github.io/software/api/repos/github/glis-glis/loci"}, {"uid": "github/hknd23/idcempy", "html_url": "https://rseng.github.io/software/repository/github/hknd23/idcempy", "api_url": "https://rseng.github.io/software/api/repos/github/hknd23/idcempy"}, {"uid": "github/pjedge/longshot", "html_url": "https://rseng.github.io/software/repository/github/pjedge/longshot", "api_url": "https://rseng.github.io/software/api/repos/github/pjedge/longshot"}, {"uid": "github/msyazwanfaid/hilalpy", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalpy", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalpy"}, {"uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report"}, {"uid": "github/msyazwanfaid/hilalimagingdataextraction", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalimagingdataextraction", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalimagingdataextraction"}, {"uid": "github/LebeerLab/tidytacos", "html_url": "https://rseng.github.io/software/repository/github/LebeerLab/tidytacos", "api_url": "https://rseng.github.io/software/api/repos/github/LebeerLab/tidytacos"}, {"uid": "github/frank1010111/bluebonnet", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/bluebonnet", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/bluebonnet"}, {"uid": "github/frank1010111/pywaterflood", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/pywaterflood", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/pywaterflood"}, {"uid": "github/zachetienne/nrpytutorial", "html_url": "https://rseng.github.io/software/repository/github/zachetienne/nrpytutorial", "api_url": "https://rseng.github.io/software/api/repos/github/zachetienne/nrpytutorial"}, {"uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", "html_url": "https://rseng.github.io/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalRegulatoryGenomicsICL/TFBS"}, {"uid": "github/YonghuiDong/RawHummus", "html_url": "https://rseng.github.io/software/repository/github/YonghuiDong/RawHummus", "api_url": "https://rseng.github.io/software/api/repos/github/YonghuiDong/RawHummus"}, {"uid": "github/tsfloss/DensityFieldTools", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/DensityFieldTools", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/DensityFieldTools"}, {"uid": "github/tsfloss/URecon", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/URecon", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/URecon"}, {"uid": "github/tsfloss/BFast", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/BFast", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/BFast"}, {"uid": "github/rabix/cwl-format", "html_url": "https://rseng.github.io/software/repository/github/rabix/cwl-format", "api_url": "https://rseng.github.io/software/api/repos/github/rabix/cwl-format"}, {"uid": "github/GiMattia/PyPLUTO", "html_url": "https://rseng.github.io/software/repository/github/GiMattia/PyPLUTO", "api_url": "https://rseng.github.io/software/api/repos/github/GiMattia/PyPLUTO"}, {"uid": "github/thelfer/MFrontGallery", "html_url": "https://rseng.github.io/software/repository/github/thelfer/MFrontGallery", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/MFrontGallery"}, {"uid": "github/thelfer/mfem-mgis", "html_url": "https://rseng.github.io/software/repository/github/thelfer/mfem-mgis", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/mfem-mgis"}, {"uid": "github/statdivlab/rigr", "html_url": "https://rseng.github.io/software/repository/github/statdivlab/rigr", "api_url": "https://rseng.github.io/software/api/repos/github/statdivlab/rigr"}, {"uid": "github/dfki-ric/movement_primitives", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric/movement_primitives", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric/movement_primitives"}, {"uid": "github/devnums/pyheartlib", "html_url": "https://rseng.github.io/software/repository/github/devnums/pyheartlib", "api_url": "https://rseng.github.io/software/api/repos/github/devnums/pyheartlib"}, {"uid": "github/huchiayu/ParticleGridMapper.jl", "html_url": "https://rseng.github.io/software/repository/github/huchiayu/ParticleGridMapper.jl", "api_url": "https://rseng.github.io/software/api/repos/github/huchiayu/ParticleGridMapper.jl"}, {"uid": "github/simonsobs/so_noise_models", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/so_noise_models", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/so_noise_models"}, {"uid": "github/simonsobs/hmvec", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/hmvec", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/hmvec"}, {"uid": "github/simonsobs/nemo", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/nemo"}, {"uid": "github/simonsobs/mnms", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/mnms", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/mnms"}, {"uid": "github/simonsobs/pixell", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/pixell", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/pixell"}, {"uid": "github/danielapai/bioverse", "html_url": "https://rseng.github.io/software/repository/github/danielapai/bioverse", "api_url": "https://rseng.github.io/software/api/repos/github/danielapai/bioverse"}, {"uid": "github/warrickball/tomso", "html_url": "https://rseng.github.io/software/repository/github/warrickball/tomso", "api_url": "https://rseng.github.io/software/api/repos/github/warrickball/tomso"}, {"uid": "github/mudit-jain90/i-SPin", "html_url": "https://rseng.github.io/software/repository/github/mudit-jain90/i-SPin", "api_url": "https://rseng.github.io/software/api/repos/github/mudit-jain90/i-SPin"}, {"uid": "github/sfschen/velocileptors", "html_url": "https://rseng.github.io/software/repository/github/sfschen/velocileptors", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/velocileptors"}, {"uid": "github/sfschen/spinosaurus", "html_url": "https://rseng.github.io/software/repository/github/sfschen/spinosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/spinosaurus"}, {"uid": "github/HEAP-EXPOSOME/metagenomics-ML", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/metagenomics-ML"}, {"uid": "github/HEAP-EXPOSOME/biopipe", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/biopipe", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/biopipe"}, {"uid": "github/HEAP-EXPOSOME/ConsumerData", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/ConsumerData", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/ConsumerData"}, {"uid": "github/HEAP-EXPOSOME/streaming-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/streaming-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/streaming-demo"}, {"uid": "github/HEAP-EXPOSOME/exposome-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/exposome-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/exposome-demo"}, {"uid": "github/HEAP-EXPOSOME/hopsworks-chef", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks-chef"}, {"uid": "github/HEAP-EXPOSOME/KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/KITE"}, {"uid": "github/HEAP-EXPOSOME/HPV-KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-KITE"}, {"uid": "github/HEAP-EXPOSOME/HPV-meta", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-meta", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-meta"}, {"uid": "github/HEAP-EXPOSOME/hopsworks", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks"}, {"uid": "github/desResLab/LINFA", "html_url": "https://rseng.github.io/software/repository/github/desResLab/LINFA", "api_url": "https://rseng.github.io/software/api/repos/github/desResLab/LINFA"}, {"uid": "github/CNuge/BOLD-CLI", "html_url": "https://rseng.github.io/software/repository/github/CNuge/BOLD-CLI", "api_url": "https://rseng.github.io/software/api/repos/github/CNuge/BOLD-CLI"}, {"uid": "github/oxpig/ImmuneBuilder", "html_url": "https://rseng.github.io/software/repository/github/oxpig/ImmuneBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/oxpig/ImmuneBuilder"}, {"uid": "github/SYalouz/QuantNBody", "html_url": "https://rseng.github.io/software/repository/github/SYalouz/QuantNBody", "api_url": "https://rseng.github.io/software/api/repos/github/SYalouz/QuantNBody"}, {"uid": "github/shaelebrown/TDApplied", "html_url": "https://rseng.github.io/software/repository/github/shaelebrown/TDApplied", "api_url": "https://rseng.github.io/software/api/repos/github/shaelebrown/TDApplied"}, {"uid": "github/upb-lea/gym-electric-motor", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/gym-electric-motor", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/gym-electric-motor"}, {"uid": "github/upb-lea/ElectricGrid.jl", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/ElectricGrid.jl", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/ElectricGrid.jl"}, {"uid": "github/upb-lea/openmodelica-microgrid-gym", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/openmodelica-microgrid-gym", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/openmodelica-microgrid-gym"}, {"uid": "github/gumilevskij/Framework", "html_url": "https://rseng.github.io/software/repository/github/gumilevskij/Framework", "api_url": "https://rseng.github.io/software/api/repos/github/gumilevskij/Framework"}, {"uid": "github/3top1a/biotools-linter", "html_url": "https://rseng.github.io/software/repository/github/3top1a/biotools-linter", "api_url": "https://rseng.github.io/software/api/repos/github/3top1a/biotools-linter"}, {"uid": "github/joefarrington/mdpax", "html_url": "https://rseng.github.io/software/repository/github/joefarrington/mdpax", "api_url": "https://rseng.github.io/software/api/repos/github/joefarrington/mdpax"}, {"uid": "github/lrnv/Copulas.jl", "html_url": "https://rseng.github.io/software/repository/github/lrnv/Copulas.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/Copulas.jl"}, {"uid": "github/lrnv/cort", "html_url": "https://rseng.github.io/software/repository/github/lrnv/cort", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/cort"}, {"uid": "github/SNOwGLoBES/snowglobes", "html_url": "https://rseng.github.io/software/repository/github/SNOwGLoBES/snowglobes", "api_url": "https://rseng.github.io/software/api/repos/github/SNOwGLoBES/snowglobes"}, {"uid": "github/calebclass/Shiny-NanoTube", "html_url": "https://rseng.github.io/software/repository/github/calebclass/Shiny-NanoTube", "api_url": "https://rseng.github.io/software/api/repos/github/calebclass/Shiny-NanoTube"}, {"uid": "github/Toloka/crowd-kit", "html_url": "https://rseng.github.io/software/repository/github/Toloka/crowd-kit", "api_url": "https://rseng.github.io/software/api/repos/github/Toloka/crowd-kit"}, {"uid": "github/mberto79/XCALibre.jl", "html_url": "https://rseng.github.io/software/repository/github/mberto79/XCALibre.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mberto79/XCALibre.jl"}, {"uid": "github/flosalbizziae/kataegis", "html_url": "https://rseng.github.io/software/repository/github/flosalbizziae/kataegis", "api_url": "https://rseng.github.io/software/api/repos/github/flosalbizziae/kataegis"}, {"uid": "github/dynamicslab/pysindy", "html_url": "https://rseng.github.io/software/repository/github/dynamicslab/pysindy", "api_url": "https://rseng.github.io/software/api/repos/github/dynamicslab/pysindy"}, {"uid": "github/tumcms/Open-Infra-Platform", "html_url": "https://rseng.github.io/software/repository/github/tumcms/Open-Infra-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/tumcms/Open-Infra-Platform"}, {"uid": "github/zd1/telseq", "html_url": "https://rseng.github.io/software/repository/github/zd1/telseq", "api_url": "https://rseng.github.io/software/api/repos/github/zd1/telseq"}, {"uid": "github/renecotyfanboy/jaxspec", "html_url": "https://rseng.github.io/software/repository/github/renecotyfanboy/jaxspec", "api_url": "https://rseng.github.io/software/api/repos/github/renecotyfanboy/jaxspec"}, {"uid": "github/cma2015/iwa-miRNA", "html_url": "https://rseng.github.io/software/repository/github/cma2015/iwa-miRNA", "api_url": "https://rseng.github.io/software/api/repos/github/cma2015/iwa-miRNA"}, {"uid": "github/halomod/hmf", "html_url": "https://rseng.github.io/software/repository/github/halomod/hmf", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/hmf"}, {"uid": "github/halomod/halomod", "html_url": "https://rseng.github.io/software/repository/github/halomod/halomod", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/halomod"}, {"uid": "github/thejasvibr/bat_beamshapes", "html_url": "https://rseng.github.io/software/repository/github/thejasvibr/bat_beamshapes", "api_url": "https://rseng.github.io/software/api/repos/github/thejasvibr/bat_beamshapes"}, {"uid": "github/astrogilda/mirkwood", "html_url": "https://rseng.github.io/software/repository/github/astrogilda/mirkwood", "api_url": "https://rseng.github.io/software/api/repos/github/astrogilda/mirkwood"}, {"uid": "github/alerpaschoal/CODARFE", "html_url": "https://rseng.github.io/software/repository/github/alerpaschoal/CODARFE", "api_url": "https://rseng.github.io/software/api/repos/github/alerpaschoal/CODARFE"}, {"uid": "github/mdsteiner/EFAtools", "html_url": "https://rseng.github.io/software/repository/github/mdsteiner/EFAtools", "api_url": "https://rseng.github.io/software/api/repos/github/mdsteiner/EFAtools"}, {"uid": "github/niess/calzone", "html_url": "https://rseng.github.io/software/repository/github/niess/calzone", "api_url": "https://rseng.github.io/software/api/repos/github/niess/calzone"}, {"uid": "github/HARMONI-ELT/HSIM", "html_url": "https://rseng.github.io/software/repository/github/HARMONI-ELT/HSIM", "api_url": "https://rseng.github.io/software/api/repos/github/HARMONI-ELT/HSIM"}, {"uid": "github/paucablop/chemotools", "html_url": "https://rseng.github.io/software/repository/github/paucablop/chemotools", "api_url": "https://rseng.github.io/software/api/repos/github/paucablop/chemotools"}, {"uid": "github/JieweiHuang/Coport", "html_url": "https://rseng.github.io/software/repository/github/JieweiHuang/Coport", "api_url": "https://rseng.github.io/software/api/repos/github/JieweiHuang/Coport"}, {"uid": "github/mrbell/fsclean", "html_url": "https://rseng.github.io/software/repository/github/mrbell/fsclean", "api_url": "https://rseng.github.io/software/api/repos/github/mrbell/fsclean"}, {"uid": "github/getzlab/rnaseqc", "html_url": "https://rseng.github.io/software/repository/github/getzlab/rnaseqc", "api_url": "https://rseng.github.io/software/api/repos/github/getzlab/rnaseqc"}, {"uid": "github/ggmichael/craterstats", "html_url": "https://rseng.github.io/software/repository/github/ggmichael/craterstats", "api_url": "https://rseng.github.io/software/api/repos/github/ggmichael/craterstats"}, {"uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP"}, {"uid": "github/ELELAB/cancermuts", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/cancermuts", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/cancermuts"}, {"uid": "github/ELELAB/LipidDyn", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/LipidDyn", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/LipidDyn"}, {"uid": "github/ELELAB/RosettaDDGPrediction", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/RosettaDDGPrediction", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/RosettaDDGPrediction"}, {"uid": "github/MolMeDB/MolMeDB", "html_url": "https://rseng.github.io/software/repository/github/MolMeDB/MolMeDB", "api_url": "https://rseng.github.io/software/api/repos/github/MolMeDB/MolMeDB"}, {"uid": "github/WMD-group/StarryNight", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/StarryNight", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/StarryNight"}, {"uid": "github/WMD-group/Eris", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/Eris", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/Eris"}, {"uid": "github/WMD-group/SMACT", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/SMACT", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/SMACT"}, {"uid": "github/WMD-group/MacroDensity", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/MacroDensity", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/MacroDensity"}, {"uid": "github/WMD-group/hybrid-perovskites", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/hybrid-perovskites", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/hybrid-perovskites"}, {"uid": "github/WMD-group/CarrierCapture.jl", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/CarrierCapture.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/CarrierCapture.jl"}, {"uid": "github/Clinical-Genomics-Umea/fraggler", "html_url": "https://rseng.github.io/software/repository/github/Clinical-Genomics-Umea/fraggler", "api_url": "https://rseng.github.io/software/api/repos/github/Clinical-Genomics-Umea/fraggler"}, {"uid": "github/bfarr/exocartographer", "html_url": "https://rseng.github.io/software/repository/github/bfarr/exocartographer", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/exocartographer"}, {"uid": "github/bfarr/kombine", "html_url": "https://rseng.github.io/software/repository/github/bfarr/kombine", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/kombine"}, {"uid": "github/agreenbaum/ImPlaneIA", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/ImPlaneIA", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/ImPlaneIA"}, {"uid": "github/agreenbaum/gsgs", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/gsgs", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/gsgs"}, {"uid": "github/antismash/antismash", "html_url": "https://rseng.github.io/software/repository/github/antismash/antismash", "api_url": "https://rseng.github.io/software/api/repos/github/antismash/antismash"}, {"uid": "github/migp11/pyfastcore", "html_url": "https://rseng.github.io/software/repository/github/migp11/pyfastcore", "api_url": "https://rseng.github.io/software/api/repos/github/migp11/pyfastcore"}, {"uid": "github/soleneulmer/bem", "html_url": "https://rseng.github.io/software/repository/github/soleneulmer/bem", "api_url": "https://rseng.github.io/software/api/repos/github/soleneulmer/bem"}, {"uid": "github/SCM-NV/qmflows", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows"}, {"uid": "github/SCM-NV/pyZacros", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/pyZacros", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/pyZacros"}, {"uid": "github/SCM-NV/qmflows-namd", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows-namd", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows-namd"}, {"uid": "github/WBK-Robotics/pybullet_industrial", "html_url": "https://rseng.github.io/software/repository/github/WBK-Robotics/pybullet_industrial", "api_url": "https://rseng.github.io/software/api/repos/github/WBK-Robotics/pybullet_industrial"}, {"uid": "github/DS4Ag/dpest", "html_url": "https://rseng.github.io/software/repository/github/DS4Ag/dpest", "api_url": "https://rseng.github.io/software/api/repos/github/DS4Ag/dpest"}, {"uid": "github/ulilautenschlager/crimp", "html_url": "https://rseng.github.io/software/repository/github/ulilautenschlager/crimp", "api_url": "https://rseng.github.io/software/api/repos/github/ulilautenschlager/crimp"}, {"uid": "github/fruzsinaagocs/oscode", "html_url": "https://rseng.github.io/software/repository/github/fruzsinaagocs/oscode", "api_url": "https://rseng.github.io/software/api/repos/github/fruzsinaagocs/oscode"}, {"uid": "github/souradipp76/MM-PoE", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/MM-PoE", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/MM-PoE"}, {"uid": "github/souradipp76/ReadMeReady", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/ReadMeReady", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/ReadMeReady"}, {"uid": "github/mawenlong2016/DeepAnnotation", "html_url": "https://rseng.github.io/software/repository/github/mawenlong2016/DeepAnnotation", "api_url": "https://rseng.github.io/software/api/repos/github/mawenlong2016/DeepAnnotation"}, {"uid": "github/bezuidenhoutmc/SeeKAT", "html_url": "https://rseng.github.io/software/repository/github/bezuidenhoutmc/SeeKAT", "api_url": "https://rseng.github.io/software/api/repos/github/bezuidenhoutmc/SeeKAT"}, {"uid": "github/HinLeung622/pipes_vis", "html_url": "https://rseng.github.io/software/repository/github/HinLeung622/pipes_vis", "api_url": "https://rseng.github.io/software/api/repos/github/HinLeung622/pipes_vis"}, {"uid": "github/wangchao-malab/DeepAc4C", "html_url": "https://rseng.github.io/software/repository/github/wangchao-malab/DeepAc4C", "api_url": "https://rseng.github.io/software/api/repos/github/wangchao-malab/DeepAc4C"}, {"uid": "github/JulienPeloton/s4cmb", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/s4cmb", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/s4cmb"}, {"uid": "github/JulienPeloton/lenscov", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/lenscov", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/lenscov"}, {"uid": "github/ExoArcturus/TriArc", "html_url": "https://rseng.github.io/software/repository/github/ExoArcturus/TriArc", "api_url": "https://rseng.github.io/software/api/repos/github/ExoArcturus/TriArc"}, {"uid": "github/lwang-astro/SDAR", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/SDAR", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/SDAR"}, {"uid": "github/lwang-astro/PeTar", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/PeTar", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/PeTar"}, {"uid": "github/statgen/demuxlet", "html_url": "https://rseng.github.io/software/repository/github/statgen/demuxlet", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/demuxlet"}, {"uid": "github/statgen/popscle", "html_url": "https://rseng.github.io/software/repository/github/statgen/popscle", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/popscle"}, {"uid": "github/statgen/Minimac4", "html_url": "https://rseng.github.io/software/repository/github/statgen/Minimac4", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/Minimac4"}, {"uid": "github/MREYE-LUMC/ZOSPy", "html_url": "https://rseng.github.io/software/repository/github/MREYE-LUMC/ZOSPy", "api_url": "https://rseng.github.io/software/api/repos/github/MREYE-LUMC/ZOSPy"}, {"uid": "github/etiennepayet/nti", "html_url": "https://rseng.github.io/software/repository/github/etiennepayet/nti", "api_url": "https://rseng.github.io/software/api/repos/github/etiennepayet/nti"}, {"uid": "github/kusmic/pycosie", "html_url": "https://rseng.github.io/software/repository/github/kusmic/pycosie", "api_url": "https://rseng.github.io/software/api/repos/github/kusmic/pycosie"}, {"uid": "github/skiehl/wwz", "html_url": "https://rseng.github.io/software/repository/github/skiehl/wwz", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/wwz"}, {"uid": "github/skiehl/polarizationtools", "html_url": "https://rseng.github.io/software/repository/github/skiehl/polarizationtools", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/polarizationtools"}, {"uid": "github/skiehl/lcsim", "html_url": "https://rseng.github.io/software/repository/github/skiehl/lcsim", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/lcsim"}, {"uid": "github/florisvb/PyNumDiff", "html_url": "https://rseng.github.io/software/repository/github/florisvb/PyNumDiff", "api_url": "https://rseng.github.io/software/api/repos/github/florisvb/PyNumDiff"}, {"uid": "github/sjvrijn/mf2", "html_url": "https://rseng.github.io/software/repository/github/sjvrijn/mf2", "api_url": "https://rseng.github.io/software/api/repos/github/sjvrijn/mf2"}, {"uid": "github/Wimmics/olivaw", "html_url": "https://rseng.github.io/software/repository/github/Wimmics/olivaw", "api_url": "https://rseng.github.io/software/api/repos/github/Wimmics/olivaw"}, {"uid": "github/GabrieleParimbelli/COLIBRI", "html_url": "https://rseng.github.io/software/repository/github/GabrieleParimbelli/COLIBRI", "api_url": "https://rseng.github.io/software/api/repos/github/GabrieleParimbelli/COLIBRI"}, {"uid": "github/gerlero/foamlib", "html_url": "https://rseng.github.io/software/repository/github/gerlero/foamlib", "api_url": "https://rseng.github.io/software/api/repos/github/gerlero/foamlib"}, {"uid": "github/scottleedavis/googleearthtoolbox", "html_url": "https://rseng.github.io/software/repository/github/scottleedavis/googleearthtoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/scottleedavis/googleearthtoolbox"}, {"uid": "github/bihealth/sodar_core", "html_url": "https://rseng.github.io/software/repository/github/bihealth/sodar_core", "api_url": "https://rseng.github.io/software/api/repos/github/bihealth/sodar_core"}, {"uid": "github/mpiersonsmela/SeqVerify", "html_url": "https://rseng.github.io/software/repository/github/mpiersonsmela/SeqVerify", "api_url": "https://rseng.github.io/software/api/repos/github/mpiersonsmela/SeqVerify"}, {"uid": "github/EHTJulia/ScatteringOptics.jl", "html_url": "https://rseng.github.io/software/repository/github/EHTJulia/ScatteringOptics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EHTJulia/ScatteringOptics.jl"}, {"uid": "github/rajewsky-lab/spacemake", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/spacemake", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/spacemake"}, {"uid": "github/rajewsky-lab/dropbead", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/dropbead", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/dropbead"}, {"uid": "github/rajewsky-lab/novosparc", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/novosparc", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/novosparc"}, {"uid": "github/r3w0p/bobocep", "html_url": "https://rseng.github.io/software/repository/github/r3w0p/bobocep", "api_url": "https://rseng.github.io/software/api/repos/github/r3w0p/bobocep"}, {"uid": "github/rbrthogan/GAz", "html_url": "https://rseng.github.io/software/repository/github/rbrthogan/GAz", "api_url": "https://rseng.github.io/software/api/repos/github/rbrthogan/GAz"}, {"uid": "github/Kamuish/archi", "html_url": "https://rseng.github.io/software/repository/github/Kamuish/archi", "api_url": "https://rseng.github.io/software/api/repos/github/Kamuish/archi"}, {"uid": "github/andersdot/photoParallax", "html_url": "https://rseng.github.io/software/repository/github/andersdot/photoParallax", "api_url": "https://rseng.github.io/software/api/repos/github/andersdot/photoParallax"}, {"uid": "github/rezeebe/orbitN", "html_url": "https://rseng.github.io/software/repository/github/rezeebe/orbitN", "api_url": "https://rseng.github.io/software/api/repos/github/rezeebe/orbitN"}, {"uid": "github/PieterjanRobbe/GaussianRandomFields.jl", "html_url": "https://rseng.github.io/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PieterjanRobbe/GaussianRandomFields.jl"}, {"uid": "github/dirostri/CREPE", "html_url": "https://rseng.github.io/software/repository/github/dirostri/CREPE", "api_url": "https://rseng.github.io/software/api/repos/github/dirostri/CREPE"}, {"uid": "github/heli-xu/findSVI", "html_url": "https://rseng.github.io/software/repository/github/heli-xu/findSVI", "api_url": "https://rseng.github.io/software/api/repos/github/heli-xu/findSVI"}, {"uid": "github/agnesbrnb/MetIDfyR", "html_url": "https://rseng.github.io/software/repository/github/agnesbrnb/MetIDfyR", "api_url": "https://rseng.github.io/software/api/repos/github/agnesbrnb/MetIDfyR"}, {"uid": "github/anuradhawick/LRBinner", "html_url": "https://rseng.github.io/software/repository/github/anuradhawick/LRBinner", "api_url": "https://rseng.github.io/software/api/repos/github/anuradhawick/LRBinner"}, {"uid": "github/sparks-baird/xtal2png", "html_url": "https://rseng.github.io/software/repository/github/sparks-baird/xtal2png", "api_url": "https://rseng.github.io/software/api/repos/github/sparks-baird/xtal2png"}, {"uid": "github/pymedphys/pymedphys", "html_url": "https://rseng.github.io/software/repository/github/pymedphys/pymedphys", "api_url": "https://rseng.github.io/software/api/repos/github/pymedphys/pymedphys"}, {"uid": "github/alawryaguila/multi-view-AE", "html_url": "https://rseng.github.io/software/repository/github/alawryaguila/multi-view-AE", "api_url": "https://rseng.github.io/software/api/repos/github/alawryaguila/multi-view-AE"}, {"uid": "github/chenwuperth/rgz_rcnn", "html_url": "https://rseng.github.io/software/repository/github/chenwuperth/rgz_rcnn", "api_url": "https://rseng.github.io/software/api/repos/github/chenwuperth/rgz_rcnn"}, {"uid": "github/davideamato/NAPLES", "html_url": "https://rseng.github.io/software/repository/github/davideamato/NAPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davideamato/NAPLES"}, {"uid": "github/perfanalytics/pose2sim", "html_url": "https://rseng.github.io/software/repository/github/perfanalytics/pose2sim", "api_url": "https://rseng.github.io/software/api/repos/github/perfanalytics/pose2sim"}, {"uid": "github/nf-core/viralrecon", "html_url": "https://rseng.github.io/software/repository/github/nf-core/viralrecon", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/viralrecon"}, {"uid": "github/nf-core/sarek", "html_url": "https://rseng.github.io/software/repository/github/nf-core/sarek", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/sarek"}, {"uid": "github/nf-core/proteinfamilies", "html_url": "https://rseng.github.io/software/repository/github/nf-core/proteinfamilies", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/proteinfamilies"}, {"uid": "github/nf-core/airrflow", "html_url": "https://rseng.github.io/software/repository/github/nf-core/airrflow", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/airrflow"}, {"uid": "github/nf-core/mag", "html_url": "https://rseng.github.io/software/repository/github/nf-core/mag", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/mag"}, {"uid": "github/muLAn-project/muLAn", "html_url": "https://rseng.github.io/software/repository/github/muLAn-project/muLAn", "api_url": "https://rseng.github.io/software/api/repos/github/muLAn-project/muLAn"}, {"uid": "github/UoMMIB/TFBMiner", "html_url": "https://rseng.github.io/software/repository/github/UoMMIB/TFBMiner", "api_url": "https://rseng.github.io/software/api/repos/github/UoMMIB/TFBMiner"}, {"uid": "github/nickrodd/HDMSpectra", "html_url": "https://rseng.github.io/software/repository/github/nickrodd/HDMSpectra", "api_url": "https://rseng.github.io/software/api/repos/github/nickrodd/HDMSpectra"}, {"uid": "github/vgl-hub/gfastats", "html_url": "https://rseng.github.io/software/repository/github/vgl-hub/gfastats", "api_url": "https://rseng.github.io/software/api/repos/github/vgl-hub/gfastats"}, {"uid": "github/wlloyduw/ContainerProfiler", "html_url": "https://rseng.github.io/software/repository/github/wlloyduw/ContainerProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/wlloyduw/ContainerProfiler"}, {"uid": "github/mp3guy/ElasticFusion", "html_url": "https://rseng.github.io/software/repository/github/mp3guy/ElasticFusion", "api_url": "https://rseng.github.io/software/api/repos/github/mp3guy/ElasticFusion"}, {"uid": "github/rhayes777/PyAutoFit", "html_url": "https://rseng.github.io/software/repository/github/rhayes777/PyAutoFit", "api_url": "https://rseng.github.io/software/api/repos/github/rhayes777/PyAutoFit"}, {"uid": "github/iraf-community/pyraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/pyraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/pyraf"}, {"uid": "github/iraf-community/iraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/iraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/iraf"}, {"uid": "github/TeamPerie/CellDestiny", "html_url": "https://rseng.github.io/software/repository/github/TeamPerie/CellDestiny", "api_url": "https://rseng.github.io/software/api/repos/github/TeamPerie/CellDestiny"}, {"uid": "github/kkrismer/scansite4", "html_url": "https://rseng.github.io/software/repository/github/kkrismer/scansite4", "api_url": "https://rseng.github.io/software/api/repos/github/kkrismer/scansite4"}, {"uid": "github/AndreaCaldiroli/ATES-Code", "html_url": "https://rseng.github.io/software/repository/github/AndreaCaldiroli/ATES-Code", "api_url": "https://rseng.github.io/software/api/repos/github/AndreaCaldiroli/ATES-Code"}, {"uid": "github/alejandroaviles/fkpt", "html_url": "https://rseng.github.io/software/repository/github/alejandroaviles/fkpt", "api_url": "https://rseng.github.io/software/api/repos/github/alejandroaviles/fkpt"}, {"uid": "github/alicia-ziying-yang/conTEXT-explorer", "html_url": "https://rseng.github.io/software/repository/github/alicia-ziying-yang/conTEXT-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/alicia-ziying-yang/conTEXT-explorer"}, {"uid": "github/mikekatz04/BOWIE", "html_url": "https://rseng.github.io/software/repository/github/mikekatz04/BOWIE", "api_url": "https://rseng.github.io/software/api/repos/github/mikekatz04/BOWIE"}, {"uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "html_url": "https://rseng.github.io/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "api_url": "https://rseng.github.io/software/api/repos/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022"}, {"uid": "github/matthiasdemuzere/w2w", "html_url": "https://rseng.github.io/software/repository/github/matthiasdemuzere/w2w", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasdemuzere/w2w"}, {"uid": "github/radio-astro-tools/pvextractor", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/pvextractor", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/pvextractor"}, {"uid": "github/radio-astro-tools/spectral-cube", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/spectral-cube", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/spectral-cube"}, {"uid": "github/radio-astro-tools/uvcombine", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/uvcombine", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/uvcombine"}, {"uid": "github/BiostatOmics/MORE", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/MORE", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/MORE"}, {"uid": "github/BiostatOmics/Coxmos", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/Coxmos", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/Coxmos"}, {"uid": "github/sheneman/clearcut", "html_url": "https://rseng.github.io/software/repository/github/sheneman/clearcut", "api_url": "https://rseng.github.io/software/api/repos/github/sheneman/clearcut"}, {"uid": "github/aqlaboratory/openfold", "html_url": "https://rseng.github.io/software/repository/github/aqlaboratory/openfold", "api_url": "https://rseng.github.io/software/api/repos/github/aqlaboratory/openfold"}, {"uid": "github/RadioAstronomySoftwareGroup/pyradiosky", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyradiosky"}, {"uid": "github/RadioAstronomySoftwareGroup/pyuvdata", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyuvdata"}, {"uid": "github/fbreitwieser/krakenuniq", "html_url": "https://rseng.github.io/software/repository/github/fbreitwieser/krakenuniq", "api_url": "https://rseng.github.io/software/api/repos/github/fbreitwieser/krakenuniq"}, {"uid": "github/Chroma-CITI/namosim", "html_url": "https://rseng.github.io/software/repository/github/Chroma-CITI/namosim", "api_url": "https://rseng.github.io/software/api/repos/github/Chroma-CITI/namosim"}, {"uid": "github/ldliao/jointVIP", "html_url": "https://rseng.github.io/software/repository/github/ldliao/jointVIP", "api_url": "https://rseng.github.io/software/api/repos/github/ldliao/jointVIP"}, {"uid": "github/computproteomics/PolySTest", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/PolySTest", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/PolySTest"}, {"uid": "github/computproteomics/ProteoMaker", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/ProteoMaker", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/ProteoMaker"}, {"uid": "github/computproteomics/OmicsQ", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/OmicsQ", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/OmicsQ"}, {"uid": "github/jcolinhill/pyilc", "html_url": "https://rseng.github.io/software/repository/github/jcolinhill/pyilc", "api_url": "https://rseng.github.io/software/api/repos/github/jcolinhill/pyilc"}, {"uid": "github/TingMAC/FrMLNet", "html_url": "https://rseng.github.io/software/repository/github/TingMAC/FrMLNet", "api_url": "https://rseng.github.io/software/api/repos/github/TingMAC/FrMLNet"}, {"uid": "github/austinpeel/herculens", "html_url": "https://rseng.github.io/software/repository/github/austinpeel/herculens", "api_url": "https://rseng.github.io/software/api/repos/github/austinpeel/herculens"}, {"uid": "github/AnitaPetzler/AMOEBA", "html_url": "https://rseng.github.io/software/repository/github/AnitaPetzler/AMOEBA", "api_url": "https://rseng.github.io/software/api/repos/github/AnitaPetzler/AMOEBA"}, {"uid": "github/JuliaQX/QXTools.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQX/QXTools.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQX/QXTools.jl"}, {"uid": "github/PyPSA/atlite", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/atlite", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/atlite"}, {"uid": "github/PyPSA/linopy", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/linopy", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/linopy"}, {"uid": "github/Shamir-Lab/domino_web", "html_url": "https://rseng.github.io/software/repository/github/Shamir-Lab/domino_web", "api_url": "https://rseng.github.io/software/api/repos/github/Shamir-Lab/domino_web"}, {"uid": "github/cespinosa/pyHIIexplorerV2", "html_url": "https://rseng.github.io/software/repository/github/cespinosa/pyHIIexplorerV2", "api_url": "https://rseng.github.io/software/api/repos/github/cespinosa/pyHIIexplorerV2"}, {"uid": "github/m-shahbaz-kharal/LiGuard-JOSS", "html_url": "https://rseng.github.io/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", "api_url": "https://rseng.github.io/software/api/repos/github/m-shahbaz-kharal/LiGuard-JOSS"}, {"uid": "github/pni-lab/mlconfound", "html_url": "https://rseng.github.io/software/repository/github/pni-lab/mlconfound", "api_url": "https://rseng.github.io/software/api/repos/github/pni-lab/mlconfound"}, {"uid": "github/mavrix93/LightCurvesClassifier", "html_url": "https://rseng.github.io/software/repository/github/mavrix93/LightCurvesClassifier", "api_url": "https://rseng.github.io/software/api/repos/github/mavrix93/LightCurvesClassifier"}, {"uid": "github/AliYoussef96/parazitCUB", "html_url": "https://rseng.github.io/software/repository/github/AliYoussef96/parazitCUB", "api_url": "https://rseng.github.io/software/api/repos/github/AliYoussef96/parazitCUB"}, {"uid": "github/TomWagg/cogsworth", "html_url": "https://rseng.github.io/software/repository/github/TomWagg/cogsworth", "api_url": "https://rseng.github.io/software/api/repos/github/TomWagg/cogsworth"}, {"uid": "github/mriener/gausspyplus", "html_url": "https://rseng.github.io/software/repository/github/mriener/gausspyplus", "api_url": "https://rseng.github.io/software/api/repos/github/mriener/gausspyplus"}, {"uid": "github/bionlplab/GlaucomaNet", "html_url": "https://rseng.github.io/software/repository/github/bionlplab/GlaucomaNet", "api_url": "https://rseng.github.io/software/api/repos/github/bionlplab/GlaucomaNet"}, {"uid": "github/Aminsinichi/wearable-hrv", "html_url": "https://rseng.github.io/software/repository/github/Aminsinichi/wearable-hrv", "api_url": "https://rseng.github.io/software/api/repos/github/Aminsinichi/wearable-hrv"}, {"uid": "github/OFFIS-DAI/Mango.jl", "html_url": "https://rseng.github.io/software/repository/github/OFFIS-DAI/Mango.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OFFIS-DAI/Mango.jl"}, {"uid": "github/hfarias/mask_galaxy", "html_url": "https://rseng.github.io/software/repository/github/hfarias/mask_galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/hfarias/mask_galaxy"}, {"uid": "github/Jinsl-lab/SDImpute", "html_url": "https://rseng.github.io/software/repository/github/Jinsl-lab/SDImpute", "api_url": "https://rseng.github.io/software/api/repos/github/Jinsl-lab/SDImpute"}, {"uid": "github/rae-holcomb/SpinSpotter", "html_url": "https://rseng.github.io/software/repository/github/rae-holcomb/SpinSpotter", "api_url": "https://rseng.github.io/software/api/repos/github/rae-holcomb/SpinSpotter"}, {"uid": "github/CEMeNT-PSAAP/MCDC", "html_url": "https://rseng.github.io/software/repository/github/CEMeNT-PSAAP/MCDC", "api_url": "https://rseng.github.io/software/api/repos/github/CEMeNT-PSAAP/MCDC"}, {"uid": "github/brunettsp/myosothes", "html_url": "https://rseng.github.io/software/repository/github/brunettsp/myosothes", "api_url": "https://rseng.github.io/software/api/repos/github/brunettsp/myosothes"}, {"uid": "github/esa/NIDN", "html_url": "https://rseng.github.io/software/repository/github/esa/NIDN", "api_url": "https://rseng.github.io/software/api/repos/github/esa/NIDN"}, {"uid": "github/esa/pagmo2-paper", "html_url": "https://rseng.github.io/software/repository/github/esa/pagmo2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/esa/pagmo2-paper"}, {"uid": "github/esa/polyhedral-gravity-model", "html_url": "https://rseng.github.io/software/repository/github/esa/polyhedral-gravity-model", "api_url": "https://rseng.github.io/software/api/repos/github/esa/polyhedral-gravity-model"}, {"uid": "github/patkel/big-macs-calibrate", "html_url": "https://rseng.github.io/software/repository/github/patkel/big-macs-calibrate", "api_url": "https://rseng.github.io/software/api/repos/github/patkel/big-macs-calibrate"}, {"uid": "github/tldr-group/samba-web", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/samba-web", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/samba-web"}, {"uid": "github/tldr-group/taufactor", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/taufactor", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/taufactor"}, {"uid": "github/deepmedic/deepmedic", "html_url": "https://rseng.github.io/software/repository/github/deepmedic/deepmedic", "api_url": "https://rseng.github.io/software/api/repos/github/deepmedic/deepmedic"}, {"uid": "github/GrainLearning/grainLearning", "html_url": "https://rseng.github.io/software/repository/github/GrainLearning/grainLearning", "api_url": "https://rseng.github.io/software/api/repos/github/GrainLearning/grainLearning"}, {"uid": "github/elsner/arkcos", "html_url": "https://rseng.github.io/software/repository/github/elsner/arkcos", "api_url": "https://rseng.github.io/software/api/repos/github/elsner/arkcos"}, {"uid": "github/wuzhenao/CPPLS-MLP", "html_url": "https://rseng.github.io/software/repository/github/wuzhenao/CPPLS-MLP", "api_url": "https://rseng.github.io/software/api/repos/github/wuzhenao/CPPLS-MLP"}, {"uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "html_url": "https://rseng.github.io/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "api_url": "https://rseng.github.io/software/api/repos/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys"}, {"uid": "github/GRTLCollaboration/GRTresna", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRTresna", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRTresna"}, {"uid": "github/GRTLCollaboration/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRFolres"}, {"uid": "github/GRTLCollaboration/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRChombo"}, {"uid": "github/GRTLCollaboration/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRDzhadzha"}, {"uid": "github/QingyuLiaib/PLA-MoRe", "html_url": "https://rseng.github.io/software/repository/github/QingyuLiaib/PLA-MoRe", "api_url": "https://rseng.github.io/software/api/repos/github/QingyuLiaib/PLA-MoRe"}, {"uid": "github/smsharma/fermi-gce-flows", "html_url": "https://rseng.github.io/software/repository/github/smsharma/fermi-gce-flows", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/fermi-gce-flows"}, {"uid": "github/smsharma/dark-photons-perturbations", "html_url": "https://rseng.github.io/software/repository/github/smsharma/dark-photons-perturbations", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/dark-photons-perturbations"}, {"uid": "github/smsharma/mining-for-substructure-lens", "html_url": "https://rseng.github.io/software/repository/github/smsharma/mining-for-substructure-lens", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/mining-for-substructure-lens"}, {"uid": "github/ruizengalways/FOD-Net", "html_url": "https://rseng.github.io/software/repository/github/ruizengalways/FOD-Net", "api_url": "https://rseng.github.io/software/api/repos/github/ruizengalways/FOD-Net"}, {"uid": "github/remi-adam/minot", "html_url": "https://rseng.github.io/software/repository/github/remi-adam/minot", "api_url": "https://rseng.github.io/software/api/repos/github/remi-adam/minot"}, {"uid": "github/pkestene/xsmurf", "html_url": "https://rseng.github.io/software/repository/github/pkestene/xsmurf", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/xsmurf"}, {"uid": "github/pkestene/ramsesGPU", "html_url": "https://rseng.github.io/software/repository/github/pkestene/ramsesGPU", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/ramsesGPU"}, {"uid": "github/AstrobioMike/GToTree", "html_url": "https://rseng.github.io/software/repository/github/AstrobioMike/GToTree", "api_url": "https://rseng.github.io/software/api/repos/github/AstrobioMike/GToTree"}, {"uid": "github/rohinkumar/correlcalc", "html_url": "https://rseng.github.io/software/repository/github/rohinkumar/correlcalc", "api_url": "https://rseng.github.io/software/api/repos/github/rohinkumar/correlcalc"}, {"uid": "github/HaowenZhang/TRINITY", "html_url": "https://rseng.github.io/software/repository/github/HaowenZhang/TRINITY", "api_url": "https://rseng.github.io/software/api/repos/github/HaowenZhang/TRINITY"}, {"uid": "github/BEAST-Fitting/beast", "html_url": "https://rseng.github.io/software/repository/github/BEAST-Fitting/beast", "api_url": "https://rseng.github.io/software/api/repos/github/BEAST-Fitting/beast"}, {"uid": "github/918particle/AskaryanModule", "html_url": "https://rseng.github.io/software/repository/github/918particle/AskaryanModule", "api_url": "https://rseng.github.io/software/api/repos/github/918particle/AskaryanModule"}, {"uid": "github/matiscke/lcps", "html_url": "https://rseng.github.io/software/repository/github/matiscke/lcps", "api_url": "https://rseng.github.io/software/api/repos/github/matiscke/lcps"}, {"uid": "github/editeodoro/Bbarolo", "html_url": "https://rseng.github.io/software/repository/github/editeodoro/Bbarolo", "api_url": "https://rseng.github.io/software/api/repos/github/editeodoro/Bbarolo"}, {"uid": "github/wmalab/EnHiC", "html_url": "https://rseng.github.io/software/repository/github/wmalab/EnHiC", "api_url": "https://rseng.github.io/software/api/repos/github/wmalab/EnHiC"}, {"uid": "github/TheFischerLab/FLEXR", "html_url": "https://rseng.github.io/software/repository/github/TheFischerLab/FLEXR", "api_url": "https://rseng.github.io/software/api/repos/github/TheFischerLab/FLEXR"}, {"uid": "github/rhenanbartels/hrv", "html_url": "https://rseng.github.io/software/repository/github/rhenanbartels/hrv", "api_url": "https://rseng.github.io/software/api/repos/github/rhenanbartels/hrv"}, {"uid": "github/tbronzwaer/raptor", "html_url": "https://rseng.github.io/software/repository/github/tbronzwaer/raptor", "api_url": "https://rseng.github.io/software/api/repos/github/tbronzwaer/raptor"}, {"uid": "github/pilon/wiki", "html_url": "https://rseng.github.io/software/repository/github/pilon/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/pilon/wiki"}, {"uid": "github/assumpcaothiago/NRPyElliptic", "html_url": "https://rseng.github.io/software/repository/github/assumpcaothiago/NRPyElliptic", "api_url": "https://rseng.github.io/software/api/repos/github/assumpcaothiago/NRPyElliptic"}, {"uid": "github/morisUtokyo/uTR", "html_url": "https://rseng.github.io/software/repository/github/morisUtokyo/uTR", "api_url": "https://rseng.github.io/software/api/repos/github/morisUtokyo/uTR"}, {"uid": "github/koustavchandra/gwforge", "html_url": "https://rseng.github.io/software/repository/github/koustavchandra/gwforge", "api_url": "https://rseng.github.io/software/api/repos/github/koustavchandra/gwforge"}, {"uid": "github/SwiftVISA/SwiftVISASwift", "html_url": "https://rseng.github.io/software/repository/github/SwiftVISA/SwiftVISASwift", "api_url": "https://rseng.github.io/software/api/repos/github/SwiftVISA/SwiftVISASwift"}, {"uid": "github/kokron/anzu", "html_url": "https://rseng.github.io/software/repository/github/kokron/anzu", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/anzu"}, {"uid": "github/kokron/skyLine", "html_url": "https://rseng.github.io/software/repository/github/kokron/skyLine", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/skyLine"}, {"uid": "github/esilver01/small-lens-forecast-sims", "html_url": "https://rseng.github.io/software/repository/github/esilver01/small-lens-forecast-sims", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/small-lens-forecast-sims"}, {"uid": "github/esilver01/resnet-model-training", "html_url": "https://rseng.github.io/software/repository/github/esilver01/resnet-model-training", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/resnet-model-training"}, {"uid": "github/NRDD-constraints/NRDD", "html_url": "https://rseng.github.io/software/repository/github/NRDD-constraints/NRDD", "api_url": "https://rseng.github.io/software/api/repos/github/NRDD-constraints/NRDD"}, {"uid": "github/EdanRein/pyPplusS", "html_url": "https://rseng.github.io/software/repository/github/EdanRein/pyPplusS", "api_url": "https://rseng.github.io/software/api/repos/github/EdanRein/pyPplusS"}, {"uid": "github/furrer-lab/abn", "html_url": "https://rseng.github.io/software/repository/github/furrer-lab/abn", "api_url": "https://rseng.github.io/software/api/repos/github/furrer-lab/abn"}, {"uid": "github/teuben/QAC", "html_url": "https://rseng.github.io/software/repository/github/teuben/QAC", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/QAC"}, {"uid": "github/teuben/DataComb", "html_url": "https://rseng.github.io/software/repository/github/teuben/DataComb", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/DataComb"}, {"uid": "github/teuben/nemo", "html_url": "https://rseng.github.io/software/repository/github/teuben/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/nemo"}, {"uid": "github/scikit-hep/vector", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/vector", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/vector"}, {"uid": "github/scikit-hep/iminuit", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/iminuit", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/iminuit"}, {"uid": "github/scikit-hep/pyhf", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/pyhf", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/pyhf"}, {"uid": "github/mms-fcul/PypKa", "html_url": "https://rseng.github.io/software/repository/github/mms-fcul/PypKa", "api_url": "https://rseng.github.io/software/api/repos/github/mms-fcul/PypKa"}, {"uid": "github/martinsparre/XSHPipelineManager", "html_url": "https://rseng.github.io/software/repository/github/martinsparre/XSHPipelineManager", "api_url": "https://rseng.github.io/software/api/repos/github/martinsparre/XSHPipelineManager"}, {"uid": "github/AlanRace/imzMLConverter", "html_url": "https://rseng.github.io/software/repository/github/AlanRace/imzMLConverter", "api_url": "https://rseng.github.io/software/api/repos/github/AlanRace/imzMLConverter"}, {"uid": "github/haimengzhao/magic-microlensing", "html_url": "https://rseng.github.io/software/repository/github/haimengzhao/magic-microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/haimengzhao/magic-microlensing"}, {"uid": "github/duducosmos/pycosmicstar", "html_url": "https://rseng.github.io/software/repository/github/duducosmos/pycosmicstar", "api_url": "https://rseng.github.io/software/api/repos/github/duducosmos/pycosmicstar"}, {"uid": "github/dunnkers/fseval", "html_url": "https://rseng.github.io/software/repository/github/dunnkers/fseval", "api_url": "https://rseng.github.io/software/api/repos/github/dunnkers/fseval"}, {"uid": "github/JuliaHelmecke/MetaboMAPS", "html_url": "https://rseng.github.io/software/repository/github/JuliaHelmecke/MetaboMAPS", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHelmecke/MetaboMAPS"}, {"uid": "github/aamedinburgh/igmtransmission", "html_url": "https://rseng.github.io/software/repository/github/aamedinburgh/igmtransmission", "api_url": "https://rseng.github.io/software/api/repos/github/aamedinburgh/igmtransmission"}, {"uid": "github/snugel/cas-offinder", "html_url": "https://rseng.github.io/software/repository/github/snugel/cas-offinder", "api_url": "https://rseng.github.io/software/api/repos/github/snugel/cas-offinder"}, {"uid": "github/tlancian/bio_cs", "html_url": "https://rseng.github.io/software/repository/github/tlancian/bio_cs", "api_url": "https://rseng.github.io/software/api/repos/github/tlancian/bio_cs"}, {"uid": "github/nhcrisp/ADBSat", "html_url": "https://rseng.github.io/software/repository/github/nhcrisp/ADBSat", "api_url": "https://rseng.github.io/software/api/repos/github/nhcrisp/ADBSat"}, {"uid": "github/4pisky/fourpisky-core", "html_url": "https://rseng.github.io/software/repository/github/4pisky/fourpisky-core", "api_url": "https://rseng.github.io/software/api/repos/github/4pisky/fourpisky-core"}, {"uid": "github/CosmoTool/ECLIPSE", "html_url": "https://rseng.github.io/software/repository/github/CosmoTool/ECLIPSE", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoTool/ECLIPSE"}, {"uid": "github/sverhoeven/docker-cartodb", "html_url": "https://rseng.github.io/software/repository/github/sverhoeven/docker-cartodb", "api_url": "https://rseng.github.io/software/api/repos/github/sverhoeven/docker-cartodb"}, {"uid": "github/rizkg/BBHash", "html_url": "https://rseng.github.io/software/repository/github/rizkg/BBHash", "api_url": "https://rseng.github.io/software/api/repos/github/rizkg/BBHash"}, {"uid": "github/KenethGarcia/ClassiPyGRB", "html_url": "https://rseng.github.io/software/repository/github/KenethGarcia/ClassiPyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/KenethGarcia/ClassiPyGRB"}, {"uid": "github/PEREGRINE-GW/peregrine", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/peregrine", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/peregrine"}, {"uid": "github/PEREGRINE-GW/saqqara", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/saqqara", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/saqqara"}, {"uid": "github/TransDecoder/wiki", "html_url": "https://rseng.github.io/software/repository/github/TransDecoder/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/TransDecoder/wiki"}, {"uid": "github/JuliaGeometry/DelaunayTriangulation.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeometry/DelaunayTriangulation.jl"}, {"uid": "github/GoekeLab/xpore", "html_url": "https://rseng.github.io/software/repository/github/GoekeLab/xpore", "api_url": "https://rseng.github.io/software/api/repos/github/GoekeLab/xpore"}, {"uid": "github/ndaniel/fusioncatcher", "html_url": "https://rseng.github.io/software/repository/github/ndaniel/fusioncatcher", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniel/fusioncatcher"}, {"uid": "github/Krona/wiki", "html_url": "https://rseng.github.io/software/repository/github/Krona/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/Krona/wiki"}, {"uid": "github/skovaka/UNCALLED", "html_url": "https://rseng.github.io/software/repository/github/skovaka/UNCALLED", "api_url": "https://rseng.github.io/software/api/repos/github/skovaka/UNCALLED"}, {"uid": "github/fuyw-aisw/GALA", "html_url": "https://rseng.github.io/software/repository/github/fuyw-aisw/GALA", "api_url": "https://rseng.github.io/software/api/repos/github/fuyw-aisw/GALA"}, {"uid": "github/geoelements/gns", "html_url": "https://rseng.github.io/software/repository/github/geoelements/gns", "api_url": "https://rseng.github.io/software/api/repos/github/geoelements/gns"}, {"uid": "github/RuiningZHAO/wcpy", "html_url": "https://rseng.github.io/software/repository/github/RuiningZHAO/wcpy", "api_url": "https://rseng.github.io/software/api/repos/github/RuiningZHAO/wcpy"}, {"uid": "github/jonas/tig", "html_url": "https://rseng.github.io/software/repository/github/jonas/tig", "api_url": "https://rseng.github.io/software/api/repos/github/jonas/tig"}, {"uid": "github/cameron314/concurrentqueue", "html_url": "https://rseng.github.io/software/repository/github/cameron314/concurrentqueue", "api_url": "https://rseng.github.io/software/api/repos/github/cameron314/concurrentqueue"}, {"uid": "github/mlpack/mlpack", "html_url": "https://rseng.github.io/software/repository/github/mlpack/mlpack", "api_url": "https://rseng.github.io/software/api/repos/github/mlpack/mlpack"}, {"uid": "github/labgem/PPanGGOLiN", "html_url": "https://rseng.github.io/software/repository/github/labgem/PPanGGOLiN", "api_url": "https://rseng.github.io/software/api/repos/github/labgem/PPanGGOLiN"}, {"uid": "github/esteinig/nanoq", "html_url": "https://rseng.github.io/software/repository/github/esteinig/nanoq", "api_url": "https://rseng.github.io/software/api/repos/github/esteinig/nanoq"}, {"uid": "github/rickhelmus/patRoon", "html_url": "https://rseng.github.io/software/repository/github/rickhelmus/patRoon", "api_url": "https://rseng.github.io/software/api/repos/github/rickhelmus/patRoon"}, {"uid": "github/Tomoaki-Ishiyama/mpi-rockstar", "html_url": "https://rseng.github.io/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", "api_url": "https://rseng.github.io/software/api/repos/github/Tomoaki-Ishiyama/mpi-rockstar"}, {"uid": "github/bertrandplez/Turbospectrum_NLTE", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum_NLTE", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum_NLTE"}, {"uid": "github/bertrandplez/Turbospectrum2019", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum2019", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum2019"}, {"uid": "github/ladsantos/p-winds", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/p-winds", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/p-winds"}, {"uid": "github/ladsantos/flatstar", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/flatstar", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/flatstar"}, {"uid": "github/bodenlab/GRASP", "html_url": "https://rseng.github.io/software/repository/github/bodenlab/GRASP", "api_url": "https://rseng.github.io/software/api/repos/github/bodenlab/GRASP"}, {"uid": "github/DRMacIver/shrinkray", "html_url": "https://rseng.github.io/software/repository/github/DRMacIver/shrinkray", "api_url": "https://rseng.github.io/software/api/repos/github/DRMacIver/shrinkray"}, {"uid": "github/astrocatalogs/astrocats", "html_url": "https://rseng.github.io/software/repository/github/astrocatalogs/astrocats", "api_url": "https://rseng.github.io/software/api/repos/github/astrocatalogs/astrocats"}, {"uid": "github/kgullikson88/Companion-Finder", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Companion-Finder", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Companion-Finder"}, {"uid": "github/kgullikson88/Telluric-Fitter", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Telluric-Fitter", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Telluric-Fitter"}, {"uid": "github/ACTCollaboration/zCluster", "html_url": "https://rseng.github.io/software/repository/github/ACTCollaboration/zCluster", "api_url": "https://rseng.github.io/software/api/repos/github/ACTCollaboration/zCluster"}, {"uid": "github/fAndreuzzi/BisPy", "html_url": "https://rseng.github.io/software/repository/github/fAndreuzzi/BisPy", "api_url": "https://rseng.github.io/software/api/repos/github/fAndreuzzi/BisPy"}, {"uid": "github/SatelliteShorelines/CoastSeg", "html_url": "https://rseng.github.io/software/repository/github/SatelliteShorelines/CoastSeg", "api_url": "https://rseng.github.io/software/api/repos/github/SatelliteShorelines/CoastSeg"}, {"uid": "github/AMReX-Astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Nyx"}, {"uid": "github/AMReX-Astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Castro"}, {"uid": "github/AMReX-Astro/MAESTROeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/MAESTROeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/MAESTROeX"}, {"uid": "github/AMReX-Astro/wdmerger", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/wdmerger", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/wdmerger"}, {"uid": "github/cds-astro/mocpy", "html_url": "https://rseng.github.io/software/repository/github/cds-astro/mocpy", "api_url": "https://rseng.github.io/software/api/repos/github/cds-astro/mocpy"}, {"uid": "github/YSOVAR/YSOVAR", "html_url": "https://rseng.github.io/software/repository/github/YSOVAR/YSOVAR", "api_url": "https://rseng.github.io/software/api/repos/github/YSOVAR/YSOVAR"}, {"uid": "github/baker-laboratory/RoseTTAFold-All-Atom", "html_url": "https://rseng.github.io/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", "api_url": "https://rseng.github.io/software/api/repos/github/baker-laboratory/RoseTTAFold-All-Atom"}, {"uid": "github/villrv/SuperRAENN", "html_url": "https://rseng.github.io/software/repository/github/villrv/SuperRAENN", "api_url": "https://rseng.github.io/software/api/repos/github/villrv/SuperRAENN"}, {"uid": "github/msaland/THInCR-Suite", "html_url": "https://rseng.github.io/software/repository/github/msaland/THInCR-Suite", "api_url": "https://rseng.github.io/software/api/repos/github/msaland/THInCR-Suite"}, {"uid": "github/MADHATdm/MADHAT", "html_url": "https://rseng.github.io/software/repository/github/MADHATdm/MADHAT", "api_url": "https://rseng.github.io/software/api/repos/github/MADHATdm/MADHAT"}, {"uid": "github/odelaneau/shapeit4", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit4", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit4"}, {"uid": "github/odelaneau/GLIMPSE", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/GLIMPSE", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/GLIMPSE"}, {"uid": "github/odelaneau/shapeit5", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit5", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit5"}, {"uid": "github/amanchokshi/EMBERS", "html_url": "https://rseng.github.io/software/repository/github/amanchokshi/EMBERS", "api_url": "https://rseng.github.io/software/api/repos/github/amanchokshi/EMBERS"}, {"uid": "github/wfondrie/mokapot", "html_url": "https://rseng.github.io/software/repository/github/wfondrie/mokapot", "api_url": "https://rseng.github.io/software/api/repos/github/wfondrie/mokapot"}, {"uid": "github/JIBSIL/DistriFS", "html_url": "https://rseng.github.io/software/repository/github/JIBSIL/DistriFS", "api_url": "https://rseng.github.io/software/api/repos/github/JIBSIL/DistriFS"}, {"uid": "github/LucIJspeert/star_shadow", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/star_shadow", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/star_shadow"}, {"uid": "github/LucIJspeert/eclipsr", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/eclipsr", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/eclipsr"}, {"uid": "github/pyro-ppl/numpyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/numpyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/numpyro"}, {"uid": "github/pyro-ppl/pyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/pyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/pyro"}, {"uid": "github/Multiscale-Genomics/VRE", "html_url": "https://rseng.github.io/software/repository/github/Multiscale-Genomics/VRE", "api_url": "https://rseng.github.io/software/api/repos/github/Multiscale-Genomics/VRE"}, {"uid": "github/micahvista/MAMnet", "html_url": "https://rseng.github.io/software/repository/github/micahvista/MAMnet", "api_url": "https://rseng.github.io/software/api/repos/github/micahvista/MAMnet"}, {"uid": "github/AKHughes1994/polkat", "html_url": "https://rseng.github.io/software/repository/github/AKHughes1994/polkat", "api_url": "https://rseng.github.io/software/api/repos/github/AKHughes1994/polkat"}, {"uid": "github/villano-lab/nrCascadeSim", "html_url": "https://rseng.github.io/software/repository/github/villano-lab/nrCascadeSim", "api_url": "https://rseng.github.io/software/api/repos/github/villano-lab/nrCascadeSim"}, {"uid": "github/nwchemgit/nwchem", "html_url": "https://rseng.github.io/software/repository/github/nwchemgit/nwchem", "api_url": "https://rseng.github.io/software/api/repos/github/nwchemgit/nwchem"}, {"uid": "github/Ge-Lab/USAT", "html_url": "https://rseng.github.io/software/repository/github/Ge-Lab/USAT", "api_url": "https://rseng.github.io/software/api/repos/github/Ge-Lab/USAT"}, {"uid": "github/signaturescience/skater", "html_url": "https://rseng.github.io/software/repository/github/signaturescience/skater", "api_url": "https://rseng.github.io/software/api/repos/github/signaturescience/skater"}, {"uid": "github/dixonlab/hic_breakfinder", "html_url": "https://rseng.github.io/software/repository/github/dixonlab/hic_breakfinder", "api_url": "https://rseng.github.io/software/api/repos/github/dixonlab/hic_breakfinder"}, {"uid": "github/bancaditalia/black-it", "html_url": "https://rseng.github.io/software/repository/github/bancaditalia/black-it", "api_url": "https://rseng.github.io/software/api/repos/github/bancaditalia/black-it"}, {"uid": "github/wangbingjie/sbi_pp", "html_url": "https://rseng.github.io/software/repository/github/wangbingjie/sbi_pp", "api_url": "https://rseng.github.io/software/api/repos/github/wangbingjie/sbi_pp"}, {"uid": "github/candebellavita/vkompth", "html_url": "https://rseng.github.io/software/repository/github/candebellavita/vkompth", "api_url": "https://rseng.github.io/software/api/repos/github/candebellavita/vkompth"}, {"uid": "github/rodluger/Limbdark.jl", "html_url": "https://rseng.github.io/software/repository/github/rodluger/Limbdark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/Limbdark.jl"}, {"uid": "github/rodluger/planetplanet", "html_url": "https://rseng.github.io/software/repository/github/rodluger/planetplanet", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/planetplanet"}, {"uid": "github/rodluger/everest", "html_url": "https://rseng.github.io/software/repository/github/rodluger/everest", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/everest"}, {"uid": "github/rodluger/starry_process", "html_url": "https://rseng.github.io/software/repository/github/rodluger/starry_process", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/starry_process"}, {"uid": "github/wf4ever/astrotaverna", "html_url": "https://rseng.github.io/software/repository/github/wf4ever/astrotaverna", "api_url": "https://rseng.github.io/software/api/repos/github/wf4ever/astrotaverna"}, {"uid": "github/gperezs/StarcNet", "html_url": "https://rseng.github.io/software/repository/github/gperezs/StarcNet", "api_url": "https://rseng.github.io/software/api/repos/github/gperezs/StarcNet"}, {"uid": "github/nmfs-fish-tools/ssmse", "html_url": "https://rseng.github.io/software/repository/github/nmfs-fish-tools/ssmse", "api_url": "https://rseng.github.io/software/api/repos/github/nmfs-fish-tools/ssmse"}, {"uid": "github/theia-dev/Qiber3D", "html_url": "https://rseng.github.io/software/repository/github/theia-dev/Qiber3D", "api_url": "https://rseng.github.io/software/api/repos/github/theia-dev/Qiber3D"}, {"uid": "github/UtrechtUniversity/raster_extraction", "html_url": "https://rseng.github.io/software/repository/github/UtrechtUniversity/raster_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/UtrechtUniversity/raster_extraction"}, {"uid": "github/IFB-ElixirFr/edam-browser", "html_url": "https://rseng.github.io/software/repository/github/IFB-ElixirFr/edam-browser", "api_url": "https://rseng.github.io/software/api/repos/github/IFB-ElixirFr/edam-browser"}, {"uid": "github/ddarriba/prottest3", "html_url": "https://rseng.github.io/software/repository/github/ddarriba/prottest3", "api_url": "https://rseng.github.io/software/api/repos/github/ddarriba/prottest3"}, {"uid": "github/ejhigson/dyPolyChord", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/dyPolyChord", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/dyPolyChord"}, {"uid": "github/ejhigson/perfectns", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/perfectns", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/perfectns"}, {"uid": "github/ejhigson/nestcheck", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/nestcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/nestcheck"}, {"uid": "github/RafiKueng/SpaghettiLens", "html_url": "https://rseng.github.io/software/repository/github/RafiKueng/SpaghettiLens", "api_url": "https://rseng.github.io/software/api/repos/github/RafiKueng/SpaghettiLens"}, {"uid": "github/undark-lab/albatross", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/albatross", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/albatross"}, {"uid": "github/undark-lab/swyft", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/swyft", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/swyft"}, {"uid": "github/undark-lab/sstrax", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/sstrax", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/sstrax"}, {"uid": "github/a-renzini/pygwb", "html_url": "https://rseng.github.io/software/repository/github/a-renzini/pygwb", "api_url": "https://rseng.github.io/software/api/repos/github/a-renzini/pygwb"}, {"uid": "github/taranu/AllStarFit", "html_url": "https://rseng.github.io/software/repository/github/taranu/AllStarFit", "api_url": "https://rseng.github.io/software/api/repos/github/taranu/AllStarFit"}, {"uid": "github/wangsiwei2010/FPMVS-CAG", "html_url": "https://rseng.github.io/software/repository/github/wangsiwei2010/FPMVS-CAG", "api_url": "https://rseng.github.io/software/api/repos/github/wangsiwei2010/FPMVS-CAG"}, {"uid": "github/ucsbdeepspace/tripp_pipeline", "html_url": "https://rseng.github.io/software/repository/github/ucsbdeepspace/tripp_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ucsbdeepspace/tripp_pipeline"}, {"uid": "github/TRACER-LULab/Hyperelastics.jl", "html_url": "https://rseng.github.io/software/repository/github/TRACER-LULab/Hyperelastics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TRACER-LULab/Hyperelastics.jl"}, {"uid": "github/clauswilke/PeptideBuilder", "html_url": "https://rseng.github.io/software/repository/github/clauswilke/PeptideBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/clauswilke/PeptideBuilder"}, {"uid": "github/wullm/fastdf", "html_url": "https://rseng.github.io/software/repository/github/wullm/fastdf", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/fastdf"}, {"uid": "github/wullm/zwindstroom", "html_url": "https://rseng.github.io/software/repository/github/wullm/zwindstroom", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/zwindstroom"}, {"uid": "github/PDB-REDO/cif-tools", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/cif-tools", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/cif-tools"}, {"uid": "github/PDB-REDO/libcifpp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libcifpp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libcifpp"}, {"uid": "github/PDB-REDO/libpdb-redo", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libpdb-redo", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libpdb-redo"}, {"uid": "github/PDB-REDO/density-fitness", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/density-fitness", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/density-fitness"}, {"uid": "github/PDB-REDO/tortoize", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/tortoize", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/tortoize"}, {"uid": "github/PDB-REDO/dssp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/dssp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/dssp"}, {"uid": "github/OP2/PyOP2", "html_url": "https://rseng.github.io/software/repository/github/OP2/PyOP2", "api_url": "https://rseng.github.io/software/api/repos/github/OP2/PyOP2"}, {"uid": "github/NLeSC-GO-common-infrastructure/marzipan", "html_url": "https://rseng.github.io/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC-GO-common-infrastructure/marzipan"}, {"uid": "github/JunTaoLuo/mctreesearch4j", "html_url": "https://rseng.github.io/software/repository/github/JunTaoLuo/mctreesearch4j", "api_url": "https://rseng.github.io/software/api/repos/github/JunTaoLuo/mctreesearch4j"}, {"uid": "github/InsightSoftwareConsortium/ITK", "html_url": "https://rseng.github.io/software/repository/github/InsightSoftwareConsortium/ITK", "api_url": "https://rseng.github.io/software/api/repos/github/InsightSoftwareConsortium/ITK"}, {"uid": "github/akleroy/phangs_imaging_scripts", "html_url": "https://rseng.github.io/software/repository/github/akleroy/phangs_imaging_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/akleroy/phangs_imaging_scripts"}, {"uid": "github/SterlingYM/astroPIPS", "html_url": "https://rseng.github.io/software/repository/github/SterlingYM/astroPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/SterlingYM/astroPIPS"}, {"uid": "github/moeyensj/atm", "html_url": "https://rseng.github.io/software/repository/github/moeyensj/atm", "api_url": "https://rseng.github.io/software/api/repos/github/moeyensj/atm"}, {"uid": "github/SDXorg/pysd", "html_url": "https://rseng.github.io/software/repository/github/SDXorg/pysd", "api_url": "https://rseng.github.io/software/api/repos/github/SDXorg/pysd"}, {"uid": "github/adrientaudiere/MiscMetabar", "html_url": "https://rseng.github.io/software/repository/github/adrientaudiere/MiscMetabar", "api_url": "https://rseng.github.io/software/api/repos/github/adrientaudiere/MiscMetabar"}, {"uid": "github/solids4foam/solids4foam", "html_url": "https://rseng.github.io/software/repository/github/solids4foam/solids4foam", "api_url": "https://rseng.github.io/software/api/repos/github/solids4foam/solids4foam"}, {"uid": "github/pmvreeswijk/ZOGY", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/ZOGY", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/ZOGY"}, {"uid": "github/pmvreeswijk/BlackBOX", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/BlackBOX", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/BlackBOX"}, {"uid": "github/DavidRConnell/matlab-igraph", "html_url": "https://rseng.github.io/software/repository/github/DavidRConnell/matlab-igraph", "api_url": "https://rseng.github.io/software/api/repos/github/DavidRConnell/matlab-igraph"}, {"uid": "github/aritraghsh09/GaMorNet", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMorNet", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMorNet"}, {"uid": "github/aritraghsh09/GaMPEN", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMPEN", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMPEN"}, {"uid": "github/devitocodes/pyrevolve", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/pyrevolve", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/pyrevolve"}, {"uid": "github/devitocodes/devito", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/devito", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/devito"}, {"uid": "github/lorenaacuna/GASTLI", "html_url": "https://rseng.github.io/software/repository/github/lorenaacuna/GASTLI", "api_url": "https://rseng.github.io/software/api/repos/github/lorenaacuna/GASTLI"}, {"uid": "github/RangamaniLabUCSD/smart", "html_url": "https://rseng.github.io/software/repository/github/RangamaniLabUCSD/smart", "api_url": "https://rseng.github.io/software/api/repos/github/RangamaniLabUCSD/smart"}, {"uid": "github/abacusorg/zeldovich-PLT", "html_url": "https://rseng.github.io/software/repository/github/abacusorg/zeldovich-PLT", "api_url": "https://rseng.github.io/software/api/repos/github/abacusorg/zeldovich-PLT"}, {"uid": "github/flyaflya/causact", "html_url": "https://rseng.github.io/software/repository/github/flyaflya/causact", "api_url": "https://rseng.github.io/software/api/repos/github/flyaflya/causact"}, {"uid": "github/ramadatta/CPgeneProfiler", "html_url": "https://rseng.github.io/software/repository/github/ramadatta/CPgeneProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/ramadatta/CPgeneProfiler"}, {"uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "html_url": "https://rseng.github.io/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "api_url": "https://rseng.github.io/software/api/repos/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier"}, {"uid": "github/samwaseda/mamonca", "html_url": "https://rseng.github.io/software/repository/github/samwaseda/mamonca", "api_url": "https://rseng.github.io/software/api/repos/github/samwaseda/mamonca"}, {"uid": "github/nextflow-io/nextflow", "html_url": "https://rseng.github.io/software/repository/github/nextflow-io/nextflow", "api_url": "https://rseng.github.io/software/api/repos/github/nextflow-io/nextflow"}, {"uid": "github/RongquanWang/ELF-DPC", "html_url": "https://rseng.github.io/software/repository/github/RongquanWang/ELF-DPC", "api_url": "https://rseng.github.io/software/api/repos/github/RongquanWang/ELF-DPC"}, {"uid": "github/odb9402/CNNPeaks", "html_url": "https://rseng.github.io/software/repository/github/odb9402/CNNPeaks", "api_url": "https://rseng.github.io/software/api/repos/github/odb9402/CNNPeaks"}, {"uid": "github/milkschen/leviosam2", "html_url": "https://rseng.github.io/software/repository/github/milkschen/leviosam2", "api_url": "https://rseng.github.io/software/api/repos/github/milkschen/leviosam2"}, {"uid": "github/JKoblitz/DSMZCellDive", "html_url": "https://rseng.github.io/software/repository/github/JKoblitz/DSMZCellDive", "api_url": "https://rseng.github.io/software/api/repos/github/JKoblitz/DSMZCellDive"}, {"uid": "github/awsteiner/bamr", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/bamr", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/bamr"}, {"uid": "github/awsteiner/o2scl", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/o2scl", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/o2scl"}, {"uid": "github/ybillchen/particle_spray", "html_url": "https://rseng.github.io/software/repository/github/ybillchen/particle_spray", "api_url": "https://rseng.github.io/software/api/repos/github/ybillchen/particle_spray"}, {"uid": "github/Adamtaranto/mimeo", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/mimeo", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/mimeo"}, {"uid": "github/Adamtaranto/Yanagiba", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/Yanagiba", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/Yanagiba"}, {"uid": "github/gramos/imagetooth", "html_url": "https://rseng.github.io/software/repository/github/gramos/imagetooth", "api_url": "https://rseng.github.io/software/api/repos/github/gramos/imagetooth"}, {"uid": "github/alejandrobll/py-sphviewer", "html_url": "https://rseng.github.io/software/repository/github/alejandrobll/py-sphviewer", "api_url": "https://rseng.github.io/software/api/repos/github/alejandrobll/py-sphviewer"}, {"uid": "github/oleksulkowski/Syn-CpG-Spacer", "html_url": "https://rseng.github.io/software/repository/github/oleksulkowski/Syn-CpG-Spacer", "api_url": "https://rseng.github.io/software/api/repos/github/oleksulkowski/Syn-CpG-Spacer"}, {"uid": "github/lberaldoesilva/tropygal", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/tropygal", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/tropygal"}, {"uid": "github/lberaldoesilva/naif", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/naif", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/naif"}, {"uid": "github/curl/curl", "html_url": "https://rseng.github.io/software/repository/github/curl/curl", "api_url": "https://rseng.github.io/software/api/repos/github/curl/curl"}, {"uid": "github/tuoyl/tat-pulsar", "html_url": "https://rseng.github.io/software/repository/github/tuoyl/tat-pulsar", "api_url": "https://rseng.github.io/software/api/repos/github/tuoyl/tat-pulsar"}, {"uid": "github/tylunel/pvpumpingsystem", "html_url": "https://rseng.github.io/software/repository/github/tylunel/pvpumpingsystem", "api_url": "https://rseng.github.io/software/api/repos/github/tylunel/pvpumpingsystem"}, {"uid": "github/jeffzhen/omnical", "html_url": "https://rseng.github.io/software/repository/github/jeffzhen/omnical", "api_url": "https://rseng.github.io/software/api/repos/github/jeffzhen/omnical"}, {"uid": "github/freemed/freeshim", "html_url": "https://rseng.github.io/software/repository/github/freemed/freeshim", "api_url": "https://rseng.github.io/software/api/repos/github/freemed/freeshim"}, {"uid": "github/vbakis/mrs", "html_url": "https://rseng.github.io/software/repository/github/vbakis/mrs", "api_url": "https://rseng.github.io/software/api/repos/github/vbakis/mrs"}, {"uid": "github/gt1/bambamc", "html_url": "https://rseng.github.io/software/repository/github/gt1/bambamc", "api_url": "https://rseng.github.io/software/api/repos/github/gt1/bambamc"}, {"uid": "github/CGATOxford/UMI-tools", "html_url": "https://rseng.github.io/software/repository/github/CGATOxford/UMI-tools", "api_url": "https://rseng.github.io/software/api/repos/github/CGATOxford/UMI-tools"}, {"uid": "github/Nextomics/NextDenovo", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/NextDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/NextDenovo"}, {"uid": "github/Nextomics/nextsv", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/nextsv", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/nextsv"}, {"uid": "github/XGI-MSU/WDMWaveletTransforms", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/WDMWaveletTransforms", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/WDMWaveletTransforms"}, {"uid": "github/XGI-MSU/PyIMRPhenomD", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/PyIMRPhenomD", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/PyIMRPhenomD"}, {"uid": "github/mkelley/zchecker", "html_url": "https://rseng.github.io/software/repository/github/mkelley/zchecker", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/zchecker"}, {"uid": "github/mkelley/calviacat", "html_url": "https://rseng.github.io/software/repository/github/mkelley/calviacat", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/calviacat"}, {"uid": "github/ViennaRNA/RNAblueprint", "html_url": "https://rseng.github.io/software/repository/github/ViennaRNA/RNAblueprint", "api_url": "https://rseng.github.io/software/api/repos/github/ViennaRNA/RNAblueprint"}, {"uid": "github/opengeos/geoai", "html_url": "https://rseng.github.io/software/repository/github/opengeos/geoai", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/geoai"}, {"uid": "github/opengeos/segment-geospatial", "html_url": "https://rseng.github.io/software/repository/github/opengeos/segment-geospatial", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/segment-geospatial"}, {"uid": "github/opengeos/HyperCoast", "html_url": "https://rseng.github.io/software/repository/github/opengeos/HyperCoast", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/HyperCoast"}, {"uid": "github/chaoliu-cl/textAnnotatoR", "html_url": "https://rseng.github.io/software/repository/github/chaoliu-cl/textAnnotatoR", "api_url": "https://rseng.github.io/software/api/repos/github/chaoliu-cl/textAnnotatoR"}, {"uid": "github/ejmackrell/tidyproteomics-interactive", "html_url": "https://rseng.github.io/software/repository/github/ejmackrell/tidyproteomics-interactive", "api_url": "https://rseng.github.io/software/api/repos/github/ejmackrell/tidyproteomics-interactive"}, {"uid": "github/MJCliffe/PASCal", "html_url": "https://rseng.github.io/software/repository/github/MJCliffe/PASCal", "api_url": "https://rseng.github.io/software/api/repos/github/MJCliffe/PASCal"}, {"uid": "github/edwardoughton/itmlogic", "html_url": "https://rseng.github.io/software/repository/github/edwardoughton/itmlogic", "api_url": "https://rseng.github.io/software/api/repos/github/edwardoughton/itmlogic"}, {"uid": "github/mlujnie/simple", "html_url": "https://rseng.github.io/software/repository/github/mlujnie/simple", "api_url": "https://rseng.github.io/software/api/repos/github/mlujnie/simple"}, {"uid": "github/brainglobe/bg-atlasapi", "html_url": "https://rseng.github.io/software/repository/github/brainglobe/bg-atlasapi", "api_url": "https://rseng.github.io/software/api/repos/github/brainglobe/bg-atlasapi"}, {"uid": "github/fgerick/Limace.jl", "html_url": "https://rseng.github.io/software/repository/github/fgerick/Limace.jl", "api_url": "https://rseng.github.io/software/api/repos/github/fgerick/Limace.jl"}, {"uid": "github/al-mcintyre/mCaller", "html_url": "https://rseng.github.io/software/repository/github/al-mcintyre/mCaller", "api_url": "https://rseng.github.io/software/api/repos/github/al-mcintyre/mCaller"}, {"uid": "github/dmvandamt/beyonce", "html_url": "https://rseng.github.io/software/repository/github/dmvandamt/beyonce", "api_url": "https://rseng.github.io/software/api/repos/github/dmvandamt/beyonce"}, {"uid": "github/COSMIC-PopSynth/COSMIC", "html_url": "https://rseng.github.io/software/repository/github/COSMIC-PopSynth/COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/COSMIC-PopSynth/COSMIC"}, {"uid": "github/natelust/least_asymmetry", "html_url": "https://rseng.github.io/software/repository/github/natelust/least_asymmetry", "api_url": "https://rseng.github.io/software/api/repos/github/natelust/least_asymmetry"}, {"uid": "github/neuroanatomy/reorient", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/reorient", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/reorient"}, {"uid": "github/neuroanatomy/thresholdmann", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/thresholdmann", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/thresholdmann"}, {"uid": "github/koenderks/jaspAudit", "html_url": "https://rseng.github.io/software/repository/github/koenderks/jaspAudit", "api_url": "https://rseng.github.io/software/api/repos/github/koenderks/jaspAudit"}, {"uid": "github/finsberg/gotranx", "html_url": "https://rseng.github.io/software/repository/github/finsberg/gotranx", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/gotranx"}, {"uid": "github/finsberg/fenicsx-beat", "html_url": "https://rseng.github.io/software/repository/github/finsberg/fenicsx-beat", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/fenicsx-beat"}, {"uid": "github/Xia-Yijie/Xponge", "html_url": "https://rseng.github.io/software/repository/github/Xia-Yijie/Xponge", "api_url": "https://rseng.github.io/software/api/repos/github/Xia-Yijie/Xponge"}, {"uid": "github/Junwu302/HiFun", "html_url": "https://rseng.github.io/software/repository/github/Junwu302/HiFun", "api_url": "https://rseng.github.io/software/api/repos/github/Junwu302/HiFun"}, {"uid": "github/SciLifeLab/TIDDIT", "html_url": "https://rseng.github.io/software/repository/github/SciLifeLab/TIDDIT", "api_url": "https://rseng.github.io/software/api/repos/github/SciLifeLab/TIDDIT"}, {"uid": "github/dfguan/purge_dups", "html_url": "https://rseng.github.io/software/repository/github/dfguan/purge_dups", "api_url": "https://rseng.github.io/software/api/repos/github/dfguan/purge_dups"}, {"uid": "github/rhysf/HaplotypeTools", "html_url": "https://rseng.github.io/software/repository/github/rhysf/HaplotypeTools", "api_url": "https://rseng.github.io/software/api/repos/github/rhysf/HaplotypeTools"}, {"uid": "github/c-martinez/BeyondTheBook", "html_url": "https://rseng.github.io/software/repository/github/c-martinez/BeyondTheBook", "api_url": "https://rseng.github.io/software/api/repos/github/c-martinez/BeyondTheBook"}, {"uid": "github/YinanZhao21/SOAP_GPU", "html_url": "https://rseng.github.io/software/repository/github/YinanZhao21/SOAP_GPU", "api_url": "https://rseng.github.io/software/api/repos/github/YinanZhao21/SOAP_GPU"}, {"uid": "github/rajeshrinet/pystokes", "html_url": "https://rseng.github.io/software/repository/github/rajeshrinet/pystokes", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshrinet/pystokes"}, {"uid": "github/nomad-coe/greenX", "html_url": "https://rseng.github.io/software/repository/github/nomad-coe/greenX", "api_url": "https://rseng.github.io/software/api/repos/github/nomad-coe/greenX"}, {"uid": "github/s-abbas/robnptests", "html_url": "https://rseng.github.io/software/repository/github/s-abbas/robnptests", "api_url": "https://rseng.github.io/software/api/repos/github/s-abbas/robnptests"}, {"uid": "github/AemulusProject/bias_emulator", "html_url": "https://rseng.github.io/software/repository/github/AemulusProject/bias_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/AemulusProject/bias_emulator"}, {"uid": "github/e-mental-health/data-processing", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/data-processing", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/data-processing"}, {"uid": "github/e-mental-health/orange-hackathon", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/orange-hackathon", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/orange-hackathon"}, {"uid": "github/TRI-AMDD/GMP-featurizer", "html_url": "https://rseng.github.io/software/repository/github/TRI-AMDD/GMP-featurizer", "api_url": "https://rseng.github.io/software/api/repos/github/TRI-AMDD/GMP-featurizer"}, {"uid": "github/aslan-ng/keepdelta", "html_url": "https://rseng.github.io/software/repository/github/aslan-ng/keepdelta", "api_url": "https://rseng.github.io/software/api/repos/github/aslan-ng/keepdelta"}, {"uid": "github/tiberioap/grav_waldo", "html_url": "https://rseng.github.io/software/repository/github/tiberioap/grav_waldo", "api_url": "https://rseng.github.io/software/api/repos/github/tiberioap/grav_waldo"}, {"uid": "github/ranocha/SummationByPartsOperators.jl", "html_url": "https://rseng.github.io/software/repository/github/ranocha/SummationByPartsOperators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ranocha/SummationByPartsOperators.jl"}, {"uid": "github/danielemichilli/DM_phase", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/DM_phase", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/DM_phase"}, {"uid": "github/danielemichilli/SpS", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/SpS", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/SpS"}, {"uid": "github/cdfortenbach/JET", "html_url": "https://rseng.github.io/software/repository/github/cdfortenbach/JET", "api_url": "https://rseng.github.io/software/api/repos/github/cdfortenbach/JET"}, {"uid": "github/StephenJHardy/SL1M", "html_url": "https://rseng.github.io/software/repository/github/StephenJHardy/SL1M", "api_url": "https://rseng.github.io/software/api/repos/github/StephenJHardy/SL1M"}, {"uid": "github/bsumlin/PyMieScatt", "html_url": "https://rseng.github.io/software/repository/github/bsumlin/PyMieScatt", "api_url": "https://rseng.github.io/software/api/repos/github/bsumlin/PyMieScatt"}, {"uid": "github/equitable-equations/fqar", "html_url": "https://rseng.github.io/software/repository/github/equitable-equations/fqar", "api_url": "https://rseng.github.io/software/api/repos/github/equitable-equations/fqar"}, {"uid": "github/philres/catfishq", "html_url": "https://rseng.github.io/software/repository/github/philres/catfishq", "api_url": "https://rseng.github.io/software/api/repos/github/philres/catfishq"}, {"uid": "github/philres/ngmlr", "html_url": "https://rseng.github.io/software/repository/github/philres/ngmlr", "api_url": "https://rseng.github.io/software/api/repos/github/philres/ngmlr"}, {"uid": "github/liulizhi1996/HPODNets", "html_url": "https://rseng.github.io/software/repository/github/liulizhi1996/HPODNets", "api_url": "https://rseng.github.io/software/api/repos/github/liulizhi1996/HPODNets"}, {"uid": "github/medbioinf/pia", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/pia", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/pia"}, {"uid": "github/medbioinf/macpepdb-frontend", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/macpepdb-frontend", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/macpepdb-frontend"}, {"uid": "github/steven-murray/pydftools", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/pydftools", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/pydftools"}, {"uid": "github/steven-murray/powerbox", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/powerbox", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/powerbox"}, {"uid": "github/steven-murray/mrpy", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/mrpy", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/mrpy"}, {"uid": "github/ExObsSim/ExoRad2-public", "html_url": "https://rseng.github.io/software/repository/github/ExObsSim/ExoRad2-public", "api_url": "https://rseng.github.io/software/api/repos/github/ExObsSim/ExoRad2-public"}, {"uid": "github/OceanGenomics/mudskipper", "html_url": "https://rseng.github.io/software/repository/github/OceanGenomics/mudskipper", "api_url": "https://rseng.github.io/software/api/repos/github/OceanGenomics/mudskipper"}, {"uid": "github/landoskape/syd", "html_url": "https://rseng.github.io/software/repository/github/landoskape/syd", "api_url": "https://rseng.github.io/software/api/repos/github/landoskape/syd"}, {"uid": "github/IonRepo/IonDiff", "html_url": "https://rseng.github.io/software/repository/github/IonRepo/IonDiff", "api_url": "https://rseng.github.io/software/api/repos/github/IonRepo/IonDiff"}, {"uid": "github/padster/pyNeuroTrace", "html_url": "https://rseng.github.io/software/repository/github/padster/pyNeuroTrace", "api_url": "https://rseng.github.io/software/api/repos/github/padster/pyNeuroTrace"}, {"uid": "github/leigh2/cetra", "html_url": "https://rseng.github.io/software/repository/github/leigh2/cetra", "api_url": "https://rseng.github.io/software/api/repos/github/leigh2/cetra"}, {"uid": "github/OpenEnergyPlatform/open-MaStR", "html_url": "https://rseng.github.io/software/repository/github/OpenEnergyPlatform/open-MaStR", "api_url": "https://rseng.github.io/software/api/repos/github/OpenEnergyPlatform/open-MaStR"}, {"uid": "github/toddy15/medicalterms", "html_url": "https://rseng.github.io/software/repository/github/toddy15/medicalterms", "api_url": "https://rseng.github.io/software/api/repos/github/toddy15/medicalterms"}, {"uid": "github/EC-Earth/ece2cmor3", "html_url": "https://rseng.github.io/software/repository/github/EC-Earth/ece2cmor3", "api_url": "https://rseng.github.io/software/api/repos/github/EC-Earth/ece2cmor3"}, {"uid": "github/mgm8/pyngham", "html_url": "https://rseng.github.io/software/repository/github/mgm8/pyngham", "api_url": "https://rseng.github.io/software/api/repos/github/mgm8/pyngham"}, {"uid": "github/LeonSong1995/gsMap", "html_url": "https://rseng.github.io/software/repository/github/LeonSong1995/gsMap", "api_url": "https://rseng.github.io/software/api/repos/github/LeonSong1995/gsMap"}, {"uid": "github/martinghunt/ziplign", "html_url": "https://rseng.github.io/software/repository/github/martinghunt/ziplign", "api_url": "https://rseng.github.io/software/api/repos/github/martinghunt/ziplign"}, {"uid": "github/hcdenbakker/sepia", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/sepia", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/sepia"}, {"uid": "github/hcdenbakker/SalmID", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/SalmID", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/SalmID"}, {"uid": "github/mwvgroup/pwv_kpno", "html_url": "https://rseng.github.io/software/repository/github/mwvgroup/pwv_kpno", "api_url": "https://rseng.github.io/software/api/repos/github/mwvgroup/pwv_kpno"}, {"uid": "github/jorgefz/photoevolver", "html_url": "https://rseng.github.io/software/repository/github/jorgefz/photoevolver", "api_url": "https://rseng.github.io/software/api/repos/github/jorgefz/photoevolver"}, {"uid": "github/sbailey/empca", "html_url": "https://rseng.github.io/software/repository/github/sbailey/empca", "api_url": "https://rseng.github.io/software/api/repos/github/sbailey/empca"}, {"uid": "github/NoahSailer/FishLSS", "html_url": "https://rseng.github.io/software/repository/github/NoahSailer/FishLSS", "api_url": "https://rseng.github.io/software/api/repos/github/NoahSailer/FishLSS"}, {"uid": "github/kushaltirumala/WaldoInSky", "html_url": "https://rseng.github.io/software/repository/github/kushaltirumala/WaldoInSky", "api_url": "https://rseng.github.io/software/api/repos/github/kushaltirumala/WaldoInSky"}, {"uid": "github/sidmohite/nimbus-astro", "html_url": "https://rseng.github.io/software/repository/github/sidmohite/nimbus-astro", "api_url": "https://rseng.github.io/software/api/repos/github/sidmohite/nimbus-astro"}, {"uid": "github/21cmFAST/21cmFAST", "html_url": "https://rseng.github.io/software/repository/github/21cmFAST/21cmFAST", "api_url": "https://rseng.github.io/software/api/repos/github/21cmFAST/21cmFAST"}, {"uid": "github/wouterpeere/GHEtool", "html_url": "https://rseng.github.io/software/repository/github/wouterpeere/GHEtool", "api_url": "https://rseng.github.io/software/api/repos/github/wouterpeere/GHEtool"}, {"uid": "github/WebSky-CITA/XGPaint.jl", "html_url": "https://rseng.github.io/software/repository/github/WebSky-CITA/XGPaint.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WebSky-CITA/XGPaint.jl"}, {"uid": "github/prioritizr/wdpar", "html_url": "https://rseng.github.io/software/repository/github/prioritizr/wdpar", "api_url": "https://rseng.github.io/software/api/repos/github/prioritizr/wdpar"}, {"uid": "github/TNOCS/csWeb", "html_url": "https://rseng.github.io/software/repository/github/TNOCS/csWeb", "api_url": "https://rseng.github.io/software/api/repos/github/TNOCS/csWeb"}, {"uid": "github/gnuradio/gnuradio", "html_url": "https://rseng.github.io/software/repository/github/gnuradio/gnuradio", "api_url": "https://rseng.github.io/software/api/repos/github/gnuradio/gnuradio"}, {"uid": "github/reggiebernardo/PTAfast", "html_url": "https://rseng.github.io/software/repository/github/reggiebernardo/PTAfast", "api_url": "https://rseng.github.io/software/api/repos/github/reggiebernardo/PTAfast"}, {"uid": "github/gully/blase", "html_url": "https://rseng.github.io/software/repository/github/gully/blase", "api_url": "https://rseng.github.io/software/api/repos/github/gully/blase"}, {"uid": "github/AgatheSenellart/MultiVae", "html_url": "https://rseng.github.io/software/repository/github/AgatheSenellart/MultiVae", "api_url": "https://rseng.github.io/software/api/repos/github/AgatheSenellart/MultiVae"}, {"uid": "github/nickk124/RCR", "html_url": "https://rseng.github.io/software/repository/github/nickk124/RCR", "api_url": "https://rseng.github.io/software/api/repos/github/nickk124/RCR"}, {"uid": "github/abs-tudelft/variant-calling-at-scale", "html_url": "https://rseng.github.io/software/repository/github/abs-tudelft/variant-calling-at-scale", "api_url": "https://rseng.github.io/software/api/repos/github/abs-tudelft/variant-calling-at-scale"}, {"uid": "github/torluca/morphofit", "html_url": "https://rseng.github.io/software/repository/github/torluca/morphofit", "api_url": "https://rseng.github.io/software/api/repos/github/torluca/morphofit"}, {"uid": "github/pkugyf/MST", "html_url": "https://rseng.github.io/software/repository/github/pkugyf/MST", "api_url": "https://rseng.github.io/software/api/repos/github/pkugyf/MST"}, {"uid": "github/miracum/ahd2fhir", "html_url": "https://rseng.github.io/software/repository/github/miracum/ahd2fhir", "api_url": "https://rseng.github.io/software/api/repos/github/miracum/ahd2fhir"}, {"uid": "github/mbonav/Exo_DMC", "html_url": "https://rseng.github.io/software/repository/github/mbonav/Exo_DMC", "api_url": "https://rseng.github.io/software/api/repos/github/mbonav/Exo_DMC"}, {"uid": "github/luxsrc/gray", "html_url": "https://rseng.github.io/software/repository/github/luxsrc/gray", "api_url": "https://rseng.github.io/software/api/repos/github/luxsrc/gray"}, {"uid": "github/lanl/CosmicEmu", "html_url": "https://rseng.github.io/software/repository/github/lanl/CosmicEmu", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/CosmicEmu"}, {"uid": "github/lanl/scico", "html_url": "https://rseng.github.io/software/repository/github/lanl/scico", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/scico"}, {"uid": "github/lanl/GLUE", "html_url": "https://rseng.github.io/software/repository/github/lanl/GLUE", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/GLUE"}, {"uid": "github/lanl/PyBNF", "html_url": "https://rseng.github.io/software/repository/github/lanl/PyBNF", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/PyBNF"}, {"uid": "github/lanl/spiner", "html_url": "https://rseng.github.io/software/repository/github/lanl/spiner", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/spiner"}, {"uid": "github/lanl/swiftbat_python", "html_url": "https://rseng.github.io/software/repository/github/lanl/swiftbat_python", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/swiftbat_python"}, {"uid": "github/lanl/singularity-eos", "html_url": "https://rseng.github.io/software/repository/github/lanl/singularity-eos", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/singularity-eos"}, {"uid": "github/tum-esm/pyra", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/pyra", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/pyra"}, {"uid": "github/tum-esm/ivy", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/ivy", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/ivy"}, {"uid": "github/adbar/htmldate", "html_url": "https://rseng.github.io/software/repository/github/adbar/htmldate", "api_url": "https://rseng.github.io/software/api/repos/github/adbar/htmldate"}, {"uid": "github/cajohare/NeutrinoFog", "html_url": "https://rseng.github.io/software/repository/github/cajohare/NeutrinoFog", "api_url": "https://rseng.github.io/software/api/repos/github/cajohare/NeutrinoFog"}, {"uid": "github/yapenzhang/excalibuhr", "html_url": "https://rseng.github.io/software/repository/github/yapenzhang/excalibuhr", "api_url": "https://rseng.github.io/software/api/repos/github/yapenzhang/excalibuhr"}, {"uid": "github/yatisht/usher", "html_url": "https://rseng.github.io/software/repository/github/yatisht/usher", "api_url": "https://rseng.github.io/software/api/repos/github/yatisht/usher"}, {"uid": "github/mrtommyb/ktransit", "html_url": "https://rseng.github.io/software/repository/github/mrtommyb/ktransit", "api_url": "https://rseng.github.io/software/api/repos/github/mrtommyb/ktransit"}, {"uid": "github/willvousden/ptemcee", "html_url": "https://rseng.github.io/software/repository/github/willvousden/ptemcee", "api_url": "https://rseng.github.io/software/api/repos/github/willvousden/ptemcee"}, {"uid": "github/Crompulence/cpl-library", "html_url": "https://rseng.github.io/software/repository/github/Crompulence/cpl-library", "api_url": "https://rseng.github.io/software/api/repos/github/Crompulence/cpl-library"}, {"uid": "github/IftachSadeh/ANNZ", "html_url": "https://rseng.github.io/software/repository/github/IftachSadeh/ANNZ", "api_url": "https://rseng.github.io/software/api/repos/github/IftachSadeh/ANNZ"}, {"uid": "github/LauraHerold/pinc", "html_url": "https://rseng.github.io/software/repository/github/LauraHerold/pinc", "api_url": "https://rseng.github.io/software/api/repos/github/LauraHerold/pinc"}, {"uid": "github/cmayer/BaitFisher-package", "html_url": "https://rseng.github.io/software/repository/github/cmayer/BaitFisher-package", "api_url": "https://rseng.github.io/software/api/repos/github/cmayer/BaitFisher-package"}, {"uid": "github/HCGB-IGTP/spaTyper", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/spaTyper", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/spaTyper"}, {"uid": "github/HCGB-IGTP/XICRA", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/XICRA", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/XICRA"}, {"uid": "github/cog-imperial/suspect", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/suspect", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/suspect"}, {"uid": "github/cog-imperial/galini", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/galini", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/galini"}, {"uid": "github/cog-imperial/GPdoemd", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/GPdoemd", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/GPdoemd"}, {"uid": "github/cog-imperial/entmoot", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/entmoot", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/entmoot"}, {"uid": "github/elizakempton/Exo_Transmit", "html_url": "https://rseng.github.io/software/repository/github/elizakempton/Exo_Transmit", "api_url": "https://rseng.github.io/software/api/repos/github/elizakempton/Exo_Transmit"}, {"uid": "github/uit-cosmo/blobmodel", "html_url": "https://rseng.github.io/software/repository/github/uit-cosmo/blobmodel", "api_url": "https://rseng.github.io/software/api/repos/github/uit-cosmo/blobmodel"}, {"uid": "github/samhforbes/PupillometryR", "html_url": "https://rseng.github.io/software/repository/github/samhforbes/PupillometryR", "api_url": "https://rseng.github.io/software/api/repos/github/samhforbes/PupillometryR"}, {"uid": "github/laurazara/IgIDivA", "html_url": "https://rseng.github.io/software/repository/github/laurazara/IgIDivA", "api_url": "https://rseng.github.io/software/api/repos/github/laurazara/IgIDivA"}, {"uid": "github/gilestrolab/ethoscope", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/ethoscope", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/ethoscope"}, {"uid": "github/gilestrolab/pySolo", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/pySolo", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/pySolo"}, {"uid": "github/rafaeleufrasio/lightning", "html_url": "https://rseng.github.io/software/repository/github/rafaeleufrasio/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/rafaeleufrasio/lightning"}, {"uid": "github/BiodataAnalysisGroup/UMIc", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/UMIc", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/UMIc"}, {"uid": "github/BiodataAnalysisGroup/kmerAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/kmerAnalyzer"}, {"uid": "github/linksmart/thing-directory", "html_url": "https://rseng.github.io/software/repository/github/linksmart/thing-directory", "api_url": "https://rseng.github.io/software/api/repos/github/linksmart/thing-directory"}, {"uid": "github/jacob-long/jtools", "html_url": "https://rseng.github.io/software/repository/github/jacob-long/jtools", "api_url": "https://rseng.github.io/software/api/repos/github/jacob-long/jtools"}, {"uid": "github/transientskp/tkp", "html_url": "https://rseng.github.io/software/repository/github/transientskp/tkp", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/tkp"}, {"uid": "github/transientskp/pyse", "html_url": "https://rseng.github.io/software/repository/github/transientskp/pyse", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/pyse"}, {"uid": "github/transientskp/lpf", "html_url": "https://rseng.github.io/software/repository/github/transientskp/lpf", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/lpf"}, {"uid": "github/rramadeu/AGHmatrix", "html_url": "https://rseng.github.io/software/repository/github/rramadeu/AGHmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/rramadeu/AGHmatrix"}, {"uid": "github/JuliaArrays/BlockArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/BlockArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/BlockArrays.jl"}, {"uid": "github/JuliaArrays/InfiniteArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/InfiniteArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/InfiniteArrays.jl"}, {"uid": "github/JuliaArrays/LazyArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/LazyArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/LazyArrays.jl"}, {"uid": "github/DESI-UR/VAST", "html_url": "https://rseng.github.io/software/repository/github/DESI-UR/VAST", "api_url": "https://rseng.github.io/software/api/repos/github/DESI-UR/VAST"}, {"uid": "github/jianhuupenn/SpaGCN", "html_url": "https://rseng.github.io/software/repository/github/jianhuupenn/SpaGCN", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuupenn/SpaGCN"}, {"uid": "github/jamesaird/FAST", "html_url": "https://rseng.github.io/software/repository/github/jamesaird/FAST", "api_url": "https://rseng.github.io/software/api/repos/github/jamesaird/FAST"}, {"uid": "github/mrazomej/AutoEncoderToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/mrazomej/AutoEncoderToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mrazomej/AutoEncoderToolkit.jl"}, {"uid": "github/difuture-lmu/dsBinVal", "html_url": "https://rseng.github.io/software/repository/github/difuture-lmu/dsBinVal", "api_url": "https://rseng.github.io/software/api/repos/github/difuture-lmu/dsBinVal"}, {"uid": "github/connor-lab/vapor", "html_url": "https://rseng.github.io/software/repository/github/connor-lab/vapor", "api_url": "https://rseng.github.io/software/api/repos/github/connor-lab/vapor"}, {"uid": "github/yuansh3354/CaSee", "html_url": "https://rseng.github.io/software/repository/github/yuansh3354/CaSee", "api_url": "https://rseng.github.io/software/api/repos/github/yuansh3354/CaSee"}, {"uid": "github/amoradinejad/limHaloPT", "html_url": "https://rseng.github.io/software/repository/github/amoradinejad/limHaloPT", "api_url": "https://rseng.github.io/software/api/repos/github/amoradinejad/limHaloPT"}, {"uid": "github/Feng-Ji-Lab/FedIRT", "html_url": "https://rseng.github.io/software/repository/github/Feng-Ji-Lab/FedIRT", "api_url": "https://rseng.github.io/software/api/repos/github/Feng-Ji-Lab/FedIRT"}, {"uid": "github/intake/intake", "html_url": "https://rseng.github.io/software/repository/github/intake/intake", "api_url": "https://rseng.github.io/software/api/repos/github/intake/intake"}, {"uid": "github/jlillo/tpfplotter", "html_url": "https://rseng.github.io/software/repository/github/jlillo/tpfplotter", "api_url": "https://rseng.github.io/software/api/repos/github/jlillo/tpfplotter"}, {"uid": "github/projectmesa/mesa", "html_url": "https://rseng.github.io/software/repository/github/projectmesa/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/projectmesa/mesa"}, {"uid": "github/ParkerLab/ataqv", "html_url": "https://rseng.github.io/software/repository/github/ParkerLab/ataqv", "api_url": "https://rseng.github.io/software/api/repos/github/ParkerLab/ataqv"}, {"uid": "github/minterpy-project/minterpy", "html_url": "https://rseng.github.io/software/repository/github/minterpy-project/minterpy", "api_url": "https://rseng.github.io/software/api/repos/github/minterpy-project/minterpy"}, {"uid": "github/qMRLab/qMRLab", "html_url": "https://rseng.github.io/software/repository/github/qMRLab/qMRLab", "api_url": "https://rseng.github.io/software/api/repos/github/qMRLab/qMRLab"}, {"uid": "github/myrafproject/myrafproject", "html_url": "https://rseng.github.io/software/repository/github/myrafproject/myrafproject", "api_url": "https://rseng.github.io/software/api/repos/github/myrafproject/myrafproject"}, {"uid": "github/CGAL/cgal", "html_url": "https://rseng.github.io/software/repository/github/CGAL/cgal", "api_url": "https://rseng.github.io/software/api/repos/github/CGAL/cgal"}, {"uid": "github/ulelab/ultraplex", "html_url": "https://rseng.github.io/software/repository/github/ulelab/ultraplex", "api_url": "https://rseng.github.io/software/api/repos/github/ulelab/ultraplex"}, {"uid": "github/Incpink-Liu/DNA-storage-R_plus", "html_url": "https://rseng.github.io/software/repository/github/Incpink-Liu/DNA-storage-R_plus", "api_url": "https://rseng.github.io/software/api/repos/github/Incpink-Liu/DNA-storage-R_plus"}, {"uid": "github/VBlesius/RHRT", "html_url": "https://rseng.github.io/software/repository/github/VBlesius/RHRT", "api_url": "https://rseng.github.io/software/api/repos/github/VBlesius/RHRT"}, {"uid": "github/eggnogdb/eggnog-mapper", "html_url": "https://rseng.github.io/software/repository/github/eggnogdb/eggnog-mapper", "api_url": "https://rseng.github.io/software/api/repos/github/eggnogdb/eggnog-mapper"}, {"uid": "github/sandmanns/CopyDetective", "html_url": "https://rseng.github.io/software/repository/github/sandmanns/CopyDetective", "api_url": "https://rseng.github.io/software/api/repos/github/sandmanns/CopyDetective"}, {"uid": "github/MicGrasso/bigonlight", "html_url": "https://rseng.github.io/software/repository/github/MicGrasso/bigonlight", "api_url": "https://rseng.github.io/software/api/repos/github/MicGrasso/bigonlight"}, {"uid": "github/agusinac/OmicFlow", "html_url": "https://rseng.github.io/software/repository/github/agusinac/OmicFlow", "api_url": "https://rseng.github.io/software/api/repos/github/agusinac/OmicFlow"}, {"uid": "github/keck-datareductionpipelines/MosfireDRP", "html_url": "https://rseng.github.io/software/repository/github/keck-datareductionpipelines/MosfireDRP", "api_url": "https://rseng.github.io/software/api/repos/github/keck-datareductionpipelines/MosfireDRP"}, {"uid": "github/Cloud-Drift/clouddrift", "html_url": "https://rseng.github.io/software/repository/github/Cloud-Drift/clouddrift", "api_url": "https://rseng.github.io/software/api/repos/github/Cloud-Drift/clouddrift"}, {"uid": "github/wesleyburr/subMaldi", "html_url": "https://rseng.github.io/software/repository/github/wesleyburr/subMaldi", "api_url": "https://rseng.github.io/software/api/repos/github/wesleyburr/subMaldi"}, {"uid": "github/trinityrnaseq/wiki", "html_url": "https://rseng.github.io/software/repository/github/trinityrnaseq/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/trinityrnaseq/wiki"}, {"uid": "github/andreaminio/haplosync", "html_url": "https://rseng.github.io/software/repository/github/andreaminio/haplosync", "api_url": "https://rseng.github.io/software/api/repos/github/andreaminio/haplosync"}, {"uid": "github/pyxnat/pyxnat", "html_url": "https://rseng.github.io/software/repository/github/pyxnat/pyxnat", "api_url": "https://rseng.github.io/software/api/repos/github/pyxnat/pyxnat"}, {"uid": "github/cb-geo/mpm", "html_url": "https://rseng.github.io/software/repository/github/cb-geo/mpm", "api_url": "https://rseng.github.io/software/api/repos/github/cb-geo/mpm"}, {"uid": "github/kathlandgren/SWAMPE", "html_url": "https://rseng.github.io/software/repository/github/kathlandgren/SWAMPE", "api_url": "https://rseng.github.io/software/api/repos/github/kathlandgren/SWAMPE"}, {"uid": "github/Ambuj-UF/APOP", "html_url": "https://rseng.github.io/software/repository/github/Ambuj-UF/APOP", "api_url": "https://rseng.github.io/software/api/repos/github/Ambuj-UF/APOP"}, {"uid": "github/dicompyler/dicompyler-core", "html_url": "https://rseng.github.io/software/repository/github/dicompyler/dicompyler-core", "api_url": "https://rseng.github.io/software/api/repos/github/dicompyler/dicompyler-core"}, {"uid": "github/KTH-Nek5000/UQit", "html_url": "https://rseng.github.io/software/repository/github/KTH-Nek5000/UQit", "api_url": "https://rseng.github.io/software/api/repos/github/KTH-Nek5000/UQit"}, {"uid": "github/uwsbel/low-fidelity-dynamic-models", "html_url": "https://rseng.github.io/software/repository/github/uwsbel/low-fidelity-dynamic-models", "api_url": "https://rseng.github.io/software/api/repos/github/uwsbel/low-fidelity-dynamic-models"}, {"uid": "github/delphes/delphes", "html_url": "https://rseng.github.io/software/repository/github/delphes/delphes", "api_url": "https://rseng.github.io/software/api/repos/github/delphes/delphes"}, {"uid": "github/stingraysoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/stingraysoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/stingraysoftware/stingray"}, {"uid": "github/slzarate/parliament2", "html_url": "https://rseng.github.io/software/repository/github/slzarate/parliament2", "api_url": "https://rseng.github.io/software/api/repos/github/slzarate/parliament2"}, {"uid": "github/jspsych/jspsych", "html_url": "https://rseng.github.io/software/repository/github/jspsych/jspsych", "api_url": "https://rseng.github.io/software/api/repos/github/jspsych/jspsych"}, {"uid": "github/chembl/EnsembleFlex", "html_url": "https://rseng.github.io/software/repository/github/chembl/EnsembleFlex", "api_url": "https://rseng.github.io/software/api/repos/github/chembl/EnsembleFlex"}, {"uid": "github/keckert7/codes", "html_url": "https://rseng.github.io/software/repository/github/keckert7/codes", "api_url": "https://rseng.github.io/software/api/repos/github/keckert7/codes"}, {"uid": "github/facom/exorings", "html_url": "https://rseng.github.io/software/repository/github/facom/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/facom/exorings"}, {"uid": "github/facom/BHMcalc", "html_url": "https://rseng.github.io/software/repository/github/facom/BHMcalc", "api_url": "https://rseng.github.io/software/api/repos/github/facom/BHMcalc"}, {"uid": "github/facom/tidev", "html_url": "https://rseng.github.io/software/repository/github/facom/tidev", "api_url": "https://rseng.github.io/software/api/repos/github/facom/tidev"}, {"uid": "github/jianhuig/fairmetrics", "html_url": "https://rseng.github.io/software/repository/github/jianhuig/fairmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuig/fairmetrics"}, {"uid": "github/cwinpy/cwinpy", "html_url": "https://rseng.github.io/software/repository/github/cwinpy/cwinpy", "api_url": "https://rseng.github.io/software/api/repos/github/cwinpy/cwinpy"}, {"uid": "github/yrjia1015/CRISPRCasStack", "html_url": "https://rseng.github.io/software/repository/github/yrjia1015/CRISPRCasStack", "api_url": "https://rseng.github.io/software/api/repos/github/yrjia1015/CRISPRCasStack"}, {"uid": "github/kevin-tofu/scikit-topt", "html_url": "https://rseng.github.io/software/repository/github/kevin-tofu/scikit-topt", "api_url": "https://rseng.github.io/software/api/repos/github/kevin-tofu/scikit-topt"}, {"uid": "github/qboxcode/qbox-public", "html_url": "https://rseng.github.io/software/repository/github/qboxcode/qbox-public", "api_url": "https://rseng.github.io/software/api/repos/github/qboxcode/qbox-public"}, {"uid": "github/AaronDavidSchneider/chemcomp", "html_url": "https://rseng.github.io/software/repository/github/AaronDavidSchneider/chemcomp", "api_url": "https://rseng.github.io/software/api/repos/github/AaronDavidSchneider/chemcomp"}, {"uid": "github/njcuk9999/apero-drs", "html_url": "https://rseng.github.io/software/repository/github/njcuk9999/apero-drs", "api_url": "https://rseng.github.io/software/api/repos/github/njcuk9999/apero-drs"}, {"uid": "github/mjshao06/pdifFinder", "html_url": "https://rseng.github.io/software/repository/github/mjshao06/pdifFinder", "api_url": "https://rseng.github.io/software/api/repos/github/mjshao06/pdifFinder"}, {"uid": "github/apertif/apercal", "html_url": "https://rseng.github.io/software/repository/github/apertif/apercal", "api_url": "https://rseng.github.io/software/api/repos/github/apertif/apercal"}, {"uid": "github/VicidominiLab/BrightEyes-MCS", "html_url": "https://rseng.github.io/software/repository/github/VicidominiLab/BrightEyes-MCS", "api_url": "https://rseng.github.io/software/api/repos/github/VicidominiLab/BrightEyes-MCS"}, {"uid": "github/cy-xu/cosmic-conn", "html_url": "https://rseng.github.io/software/repository/github/cy-xu/cosmic-conn", "api_url": "https://rseng.github.io/software/api/repos/github/cy-xu/cosmic-conn"}, {"uid": "github/cameronliang/BayesVP", "html_url": "https://rseng.github.io/software/repository/github/cameronliang/BayesVP", "api_url": "https://rseng.github.io/software/api/repos/github/cameronliang/BayesVP"}, {"uid": "github/quanted/esat", "html_url": "https://rseng.github.io/software/repository/github/quanted/esat", "api_url": "https://rseng.github.io/software/api/repos/github/quanted/esat"}, {"uid": "github/relipmoc/skewer", "html_url": "https://rseng.github.io/software/repository/github/relipmoc/skewer", "api_url": "https://rseng.github.io/software/api/repos/github/relipmoc/skewer"}, {"uid": "github/YuLab-SMU/treeio", "html_url": "https://rseng.github.io/software/repository/github/YuLab-SMU/treeio", "api_url": "https://rseng.github.io/software/api/repos/github/YuLab-SMU/treeio"}, {"uid": "github/deezer/spleeter", "html_url": "https://rseng.github.io/software/repository/github/deezer/spleeter", "api_url": "https://rseng.github.io/software/api/repos/github/deezer/spleeter"}, {"uid": "github/ilaudy/PIAO", "html_url": "https://rseng.github.io/software/repository/github/ilaudy/PIAO", "api_url": "https://rseng.github.io/software/api/repos/github/ilaudy/PIAO"}, {"uid": "github/kboone/parsnip", "html_url": "https://rseng.github.io/software/repository/github/kboone/parsnip", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/parsnip"}, {"uid": "github/kboone/avocado", "html_url": "https://rseng.github.io/software/repository/github/kboone/avocado", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/avocado"}, {"uid": "github/franciscovillaescusa/Pylians", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians"}, {"uid": "github/franciscovillaescusa/Pylians3", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians3", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians3"}, {"uid": "github/illumina/pyflow", "html_url": "https://rseng.github.io/software/repository/github/illumina/pyflow", "api_url": "https://rseng.github.io/software/api/repos/github/illumina/pyflow"}, {"uid": "github/GabrielNakamura/FishPhyloMaker", "html_url": "https://rseng.github.io/software/repository/github/GabrielNakamura/FishPhyloMaker", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielNakamura/FishPhyloMaker"}, {"uid": "github/mikesmitka/truvot", "html_url": "https://rseng.github.io/software/repository/github/mikesmitka/truvot", "api_url": "https://rseng.github.io/software/api/repos/github/mikesmitka/truvot"}, {"uid": "github/martinlackner/abcvoting", "html_url": "https://rseng.github.io/software/repository/github/martinlackner/abcvoting", "api_url": "https://rseng.github.io/software/api/repos/github/martinlackner/abcvoting"}, {"uid": "github/bessagroup/f3dasm", "html_url": "https://rseng.github.io/software/repository/github/bessagroup/f3dasm", "api_url": "https://rseng.github.io/software/api/repos/github/bessagroup/f3dasm"}, {"uid": "github/ManuelRausch/StatConfR", "html_url": "https://rseng.github.io/software/repository/github/ManuelRausch/StatConfR", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelRausch/StatConfR"}, {"uid": "github/geopandas/geopandas", "html_url": "https://rseng.github.io/software/repository/github/geopandas/geopandas", "api_url": "https://rseng.github.io/software/api/repos/github/geopandas/geopandas"}, {"uid": "github/pscicluna/precision", "html_url": "https://rseng.github.io/software/repository/github/pscicluna/precision", "api_url": "https://rseng.github.io/software/api/repos/github/pscicluna/precision"}, {"uid": "github/FredHutch/SEACR", "html_url": "https://rseng.github.io/software/repository/github/FredHutch/SEACR", "api_url": "https://rseng.github.io/software/api/repos/github/FredHutch/SEACR"}, {"uid": "github/dzesmin/TEA", "html_url": "https://rseng.github.io/software/repository/github/dzesmin/TEA", "api_url": "https://rseng.github.io/software/api/repos/github/dzesmin/TEA"}, {"uid": "github/blobtoolkit/viewer", "html_url": "https://rseng.github.io/software/repository/github/blobtoolkit/viewer", "api_url": "https://rseng.github.io/software/api/repos/github/blobtoolkit/viewer"}, {"uid": "github/thom991/MSIQuickView", "html_url": "https://rseng.github.io/software/repository/github/thom991/MSIQuickView", "api_url": "https://rseng.github.io/software/api/repos/github/thom991/MSIQuickView"}, {"uid": "github/arup-group/pam", "html_url": "https://rseng.github.io/software/repository/github/arup-group/pam", "api_url": "https://rseng.github.io/software/api/repos/github/arup-group/pam"}, {"uid": "github/MichelleLochner/astronomaly", "html_url": "https://rseng.github.io/software/repository/github/MichelleLochner/astronomaly", "api_url": "https://rseng.github.io/software/api/repos/github/MichelleLochner/astronomaly"}, {"uid": "github/SirSharpest/NarrowEscapeSimulator", "html_url": "https://rseng.github.io/software/repository/github/SirSharpest/NarrowEscapeSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/SirSharpest/NarrowEscapeSimulator"}, {"uid": "github/LucaJRossi/NIGO", "html_url": "https://rseng.github.io/software/repository/github/LucaJRossi/NIGO", "api_url": "https://rseng.github.io/software/api/repos/github/LucaJRossi/NIGO"}, {"uid": "github/iobio-zjut/IPTDFold", "html_url": "https://rseng.github.io/software/repository/github/iobio-zjut/IPTDFold", "api_url": "https://rseng.github.io/software/api/repos/github/iobio-zjut/IPTDFold"}, {"uid": "github/liushang17/AEnet", "html_url": "https://rseng.github.io/software/repository/github/liushang17/AEnet", "api_url": "https://rseng.github.io/software/api/repos/github/liushang17/AEnet"}, {"uid": "github/alphaparrot/ExoPlaSim", "html_url": "https://rseng.github.io/software/repository/github/alphaparrot/ExoPlaSim", "api_url": "https://rseng.github.io/software/api/repos/github/alphaparrot/ExoPlaSim"}, {"uid": "github/HUPO-PSI/mzspeclib-py", "html_url": "https://rseng.github.io/software/repository/github/HUPO-PSI/mzspeclib-py", "api_url": "https://rseng.github.io/software/api/repos/github/HUPO-PSI/mzspeclib-py"}, {"uid": "github/lorenzo-rovigatti/oxDNA", "html_url": "https://rseng.github.io/software/repository/github/lorenzo-rovigatti/oxDNA", "api_url": "https://rseng.github.io/software/api/repos/github/lorenzo-rovigatti/oxDNA"}, {"uid": "github/isoverse/isoreader", "html_url": "https://rseng.github.io/software/repository/github/isoverse/isoreader", "api_url": "https://rseng.github.io/software/api/repos/github/isoverse/isoreader"}, {"uid": "github/JPenuchot/ctbench", "html_url": "https://rseng.github.io/software/repository/github/JPenuchot/ctbench", "api_url": "https://rseng.github.io/software/api/repos/github/JPenuchot/ctbench"}, {"uid": "github/Trybnetic/paat", "html_url": "https://rseng.github.io/software/repository/github/Trybnetic/paat", "api_url": "https://rseng.github.io/software/api/repos/github/Trybnetic/paat"}, {"uid": "github/luinix/pesco", "html_url": "https://rseng.github.io/software/repository/github/luinix/pesco", "api_url": "https://rseng.github.io/software/api/repos/github/luinix/pesco"}, {"uid": "github/harvard-nrg/scanbuddy", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/scanbuddy", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/scanbuddy"}, {"uid": "github/harvard-nrg/dwiqc", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/dwiqc", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/dwiqc"}, {"uid": "github/gasparl/possa", "html_url": "https://rseng.github.io/software/repository/github/gasparl/possa", "api_url": "https://rseng.github.io/software/api/repos/github/gasparl/possa"}, {"uid": "github/Ashod/garli", "html_url": "https://rseng.github.io/software/repository/github/Ashod/garli", "api_url": "https://rseng.github.io/software/api/repos/github/Ashod/garli"}, {"uid": "github/computational-metabolomics/msnpy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/msnpy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/msnpy"}, {"uid": "github/computational-metabolomics/dimspy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/dimspy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/dimspy"}, {"uid": "github/dunhamlab/PacRAT", "html_url": "https://rseng.github.io/software/repository/github/dunhamlab/PacRAT", "api_url": "https://rseng.github.io/software/api/repos/github/dunhamlab/PacRAT"}, {"uid": "github/circuitgraph/circuitgraph", "html_url": "https://rseng.github.io/software/repository/github/circuitgraph/circuitgraph", "api_url": "https://rseng.github.io/software/api/repos/github/circuitgraph/circuitgraph"}, {"uid": "github/galaxyecology/tools-ecology", "html_url": "https://rseng.github.io/software/repository/github/galaxyecology/tools-ecology", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyecology/tools-ecology"}, {"uid": "github/shishirdholakia/eclipsoid", "html_url": "https://rseng.github.io/software/repository/github/shishirdholakia/eclipsoid", "api_url": "https://rseng.github.io/software/api/repos/github/shishirdholakia/eclipsoid"}, {"uid": "github/Novartis/torchsurv", "html_url": "https://rseng.github.io/software/repository/github/Novartis/torchsurv", "api_url": "https://rseng.github.io/software/api/repos/github/Novartis/torchsurv"}, {"uid": "github/firefly-cpp/NiaARM", "html_url": "https://rseng.github.io/software/repository/github/firefly-cpp/NiaARM", "api_url": "https://rseng.github.io/software/api/repos/github/firefly-cpp/NiaARM"}, {"uid": "github/shandley/hecatomb", "html_url": "https://rseng.github.io/software/repository/github/shandley/hecatomb", "api_url": "https://rseng.github.io/software/api/repos/github/shandley/hecatomb"}, {"uid": "github/Danko-Lab/dREG", "html_url": "https://rseng.github.io/software/repository/github/Danko-Lab/dREG", "api_url": "https://rseng.github.io/software/api/repos/github/Danko-Lab/dREG"}, {"uid": "github/AstroVPK/kali", "html_url": "https://rseng.github.io/software/repository/github/AstroVPK/kali", "api_url": "https://rseng.github.io/software/api/repos/github/AstroVPK/kali"}, {"uid": "github/agsreejith/CONTROL", "html_url": "https://rseng.github.io/software/repository/github/agsreejith/CONTROL", "api_url": "https://rseng.github.io/software/api/repos/github/agsreejith/CONTROL"}, {"uid": "github/panoptes/POCS", "html_url": "https://rseng.github.io/software/repository/github/panoptes/POCS", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes/POCS"}, {"uid": "github/timoast/signac", "html_url": "https://rseng.github.io/software/repository/github/timoast/signac", "api_url": "https://rseng.github.io/software/api/repos/github/timoast/signac"}, {"uid": "github/vallima/PRyMordial", "html_url": "https://rseng.github.io/software/repository/github/vallima/PRyMordial", "api_url": "https://rseng.github.io/software/api/repos/github/vallima/PRyMordial"}, {"uid": "github/peterjc/galaxy_blast", "html_url": "https://rseng.github.io/software/repository/github/peterjc/galaxy_blast", "api_url": "https://rseng.github.io/software/api/repos/github/peterjc/galaxy_blast"}, {"uid": "github/ysekig/GPMsDB-dbtk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-dbtk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-dbtk"}, {"uid": "github/ysekig/GPMsDB-tk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-tk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-tk"}, {"uid": "github/rpetit3/fastq-dl", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-dl", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-dl"}, {"uid": "github/rpetit3/fastq-scan", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-scan", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-scan"}, {"uid": "github/martenlourens/SHARC", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/SHARC", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/SHARC"}, {"uid": "github/martenlourens/pySDR", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/pySDR", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/pySDR"}, {"uid": "github/vsquicciarini/madys", "html_url": "https://rseng.github.io/software/repository/github/vsquicciarini/madys", "api_url": "https://rseng.github.io/software/api/repos/github/vsquicciarini/madys"}, {"uid": "github/sevimcengiz/Oryx-MRSI", "html_url": "https://rseng.github.io/software/repository/github/sevimcengiz/Oryx-MRSI", "api_url": "https://rseng.github.io/software/api/repos/github/sevimcengiz/Oryx-MRSI"}, {"uid": "github/Lindt8/PHITS-Tools", "html_url": "https://rseng.github.io/software/repository/github/Lindt8/PHITS-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/Lindt8/PHITS-Tools"}, {"uid": "github/yogi-tud/space_gpu", "html_url": "https://rseng.github.io/software/repository/github/yogi-tud/space_gpu", "api_url": "https://rseng.github.io/software/api/repos/github/yogi-tud/space_gpu"}, {"uid": "github/cgarraffo/StelNet", "html_url": "https://rseng.github.io/software/repository/github/cgarraffo/StelNet", "api_url": "https://rseng.github.io/software/api/repos/github/cgarraffo/StelNet"}, {"uid": "github/churchmanlab/genewalk", "html_url": "https://rseng.github.io/software/repository/github/churchmanlab/genewalk", "api_url": "https://rseng.github.io/software/api/repos/github/churchmanlab/genewalk"}, {"uid": "github/indrops/indrops", "html_url": "https://rseng.github.io/software/repository/github/indrops/indrops", "api_url": "https://rseng.github.io/software/api/repos/github/indrops/indrops"}, {"uid": "github/caracal-pipeline/stimela", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/stimela", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/stimela"}, {"uid": "github/caracal-pipeline/caracal", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/caracal", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/caracal"}, {"uid": "github/vedantchandra/wdtools", "html_url": "https://rseng.github.io/software/repository/github/vedantchandra/wdtools", "api_url": "https://rseng.github.io/software/api/repos/github/vedantchandra/wdtools"}, {"uid": "github/icredd-cheminfo/CGRdb2", "html_url": "https://rseng.github.io/software/repository/github/icredd-cheminfo/CGRdb2", "api_url": "https://rseng.github.io/software/api/repos/github/icredd-cheminfo/CGRdb2"}, {"uid": "github/DirectDM/directdm-mma", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-mma", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-mma"}, {"uid": "github/DirectDM/directdm-py", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-py", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-py"}, {"uid": "github/mtakahiro/bbpn", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/bbpn", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/bbpn"}, {"uid": "github/mtakahiro/gsf", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/gsf"}, {"uid": "github/seheonoh/2dbat", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/2dbat", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/2dbat"}, {"uid": "github/seheonoh/baygaud", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/baygaud", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/baygaud"}, {"uid": "github/icb-dcm/pyabc", "html_url": "https://rseng.github.io/software/repository/github/icb-dcm/pyabc", "api_url": "https://rseng.github.io/software/api/repos/github/icb-dcm/pyabc"}, {"uid": "github/sihanjiao/j-comb", "html_url": "https://rseng.github.io/software/repository/github/sihanjiao/j-comb", "api_url": "https://rseng.github.io/software/api/repos/github/sihanjiao/j-comb"}, {"uid": "github/trichter/yam", "html_url": "https://rseng.github.io/software/repository/github/trichter/yam", "api_url": "https://rseng.github.io/software/api/repos/github/trichter/yam"}, {"uid": "github/mikhailklassen/protostellar_evolution", "html_url": "https://rseng.github.io/software/repository/github/mikhailklassen/protostellar_evolution", "api_url": "https://rseng.github.io/software/api/repos/github/mikhailklassen/protostellar_evolution"}, {"uid": "github/gmarcais/Jellyfish", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Jellyfish", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Jellyfish"}, {"uid": "github/gmarcais/Quorum", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Quorum", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Quorum"}, {"uid": "github/ptiede/Comrade.jl", "html_url": "https://rseng.github.io/software/repository/github/ptiede/Comrade.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ptiede/Comrade.jl"}, {"uid": "github/DGtal-team/DGtal", "html_url": "https://rseng.github.io/software/repository/github/DGtal-team/DGtal", "api_url": "https://rseng.github.io/software/api/repos/github/DGtal-team/DGtal"}, {"uid": "github/tony-travis/PIQUE", "html_url": "https://rseng.github.io/software/repository/github/tony-travis/PIQUE", "api_url": "https://rseng.github.io/software/api/repos/github/tony-travis/PIQUE"}, {"uid": "github/gururajw/superlite", "html_url": "https://rseng.github.io/software/repository/github/gururajw/superlite", "api_url": "https://rseng.github.io/software/api/repos/github/gururajw/superlite"}, {"uid": "github/CIBERER/nf-CBRA-snvs", "html_url": "https://rseng.github.io/software/repository/github/CIBERER/nf-CBRA-snvs", "api_url": "https://rseng.github.io/software/api/repos/github/CIBERER/nf-CBRA-snvs"}, {"uid": "github/sisl/ExpFamilyPCA.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/ExpFamilyPCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/ExpFamilyPCA.jl"}, {"uid": "github/sisl/PyroRL", "html_url": "https://rseng.github.io/software/repository/github/sisl/PyroRL", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/PyroRL"}, {"uid": "github/sisl/POMDPStressTesting.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/POMDPStressTesting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/POMDPStressTesting.jl"}, {"uid": "github/vreverdy/magrathea-pathfinder", "html_url": "https://rseng.github.io/software/repository/github/vreverdy/magrathea-pathfinder", "api_url": "https://rseng.github.io/software/api/repos/github/vreverdy/magrathea-pathfinder"}, {"uid": "github/pudu-py/pudu", "html_url": "https://rseng.github.io/software/repository/github/pudu-py/pudu", "api_url": "https://rseng.github.io/software/api/repos/github/pudu-py/pudu"}, {"uid": "github/AndreNicolasChene/DRAGRACES", "html_url": "https://rseng.github.io/software/repository/github/AndreNicolasChene/DRAGRACES", "api_url": "https://rseng.github.io/software/api/repos/github/AndreNicolasChene/DRAGRACES"}, {"uid": "github/mackelab/sbi", "html_url": "https://rseng.github.io/software/repository/github/mackelab/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/mackelab/sbi"}, {"uid": "github/sebastien-plutniak/archeofrag", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeofrag", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeofrag"}, {"uid": "github/sebastien-plutniak/archeoviz", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeoviz", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeoviz"}, {"uid": "github/hrwakeford/ExoTiC-ISM", "html_url": "https://rseng.github.io/software/repository/github/hrwakeford/ExoTiC-ISM", "api_url": "https://rseng.github.io/software/api/repos/github/hrwakeford/ExoTiC-ISM"}, {"uid": "github/SWE-UniStuttgart/Qlunc", "html_url": "https://rseng.github.io/software/repository/github/SWE-UniStuttgart/Qlunc", "api_url": "https://rseng.github.io/software/api/repos/github/SWE-UniStuttgart/Qlunc"}, {"uid": "github/timothygebhard/ml4ptp", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/ml4ptp", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/ml4ptp"}, {"uid": "github/timothygebhard/fm4ar", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/fm4ar", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/fm4ar"}, {"uid": "github/bioinfo-center-pasteur-fr/toppred", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-center-pasteur-fr/toppred", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-center-pasteur-fr/toppred"}, {"uid": "github/BarquistLab/mason_paper", "html_url": "https://rseng.github.io/software/repository/github/BarquistLab/mason_paper", "api_url": "https://rseng.github.io/software/api/repos/github/BarquistLab/mason_paper"}, {"uid": "github/mrilikecoding/StreamPoseML", "html_url": "https://rseng.github.io/software/repository/github/mrilikecoding/StreamPoseML", "api_url": "https://rseng.github.io/software/api/repos/github/mrilikecoding/StreamPoseML"}, {"uid": "github/michaeltouati/ESVM", "html_url": "https://rseng.github.io/software/repository/github/michaeltouati/ESVM", "api_url": "https://rseng.github.io/software/api/repos/github/michaeltouati/ESVM"}, {"uid": "github/nathanaelbosch/ProbNumDiffEq.jl", "html_url": "https://rseng.github.io/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nathanaelbosch/ProbNumDiffEq.jl"}, {"uid": "github/Washington-University/CiftiLib", "html_url": "https://rseng.github.io/software/repository/github/Washington-University/CiftiLib", "api_url": "https://rseng.github.io/software/api/repos/github/Washington-University/CiftiLib"}, {"uid": "github/lyalpha/pympc", "html_url": "https://rseng.github.io/software/repository/github/lyalpha/pympc", "api_url": "https://rseng.github.io/software/api/repos/github/lyalpha/pympc"}, {"uid": "github/RenLabBioinformatics/M6Allele", "html_url": "https://rseng.github.io/software/repository/github/RenLabBioinformatics/M6Allele", "api_url": "https://rseng.github.io/software/api/repos/github/RenLabBioinformatics/M6Allele"}, {"uid": "github/cbg-ethz/shorah", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/shorah", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/shorah"}, {"uid": "github/cbg-ethz/smallgenomeutilities", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/smallgenomeutilities", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/smallgenomeutilities"}, {"uid": "github/cbg-ethz/PredictHaplo", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/PredictHaplo", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/PredictHaplo"}, {"uid": "github/cbg-ethz/LolliPop", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/LolliPop", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/LolliPop"}, {"uid": "github/cbg-ethz/V-pipe", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/V-pipe", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/V-pipe"}, {"uid": "github/bencebeky/spotrod", "html_url": "https://rseng.github.io/software/repository/github/bencebeky/spotrod", "api_url": "https://rseng.github.io/software/api/repos/github/bencebeky/spotrod"}, {"uid": "github/OPUS-MaLab/opus_fold3", "html_url": "https://rseng.github.io/software/repository/github/OPUS-MaLab/opus_fold3", "api_url": "https://rseng.github.io/software/api/repos/github/OPUS-MaLab/opus_fold3"}, {"uid": "github/automl/amltk", "html_url": "https://rseng.github.io/software/repository/github/automl/amltk", "api_url": "https://rseng.github.io/software/api/repos/github/automl/amltk"}, {"uid": "github/amerand/PMOIRED", "html_url": "https://rseng.github.io/software/repository/github/amerand/PMOIRED", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/PMOIRED"}, {"uid": "github/amerand/CANDID", "html_url": "https://rseng.github.io/software/repository/github/amerand/CANDID", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/CANDID"}, {"uid": "github/amerand/SPIPS", "html_url": "https://rseng.github.io/software/repository/github/amerand/SPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/SPIPS"}, {"uid": "github/imr-framework/OCTOPUS", "html_url": "https://rseng.github.io/software/repository/github/imr-framework/OCTOPUS", "api_url": "https://rseng.github.io/software/api/repos/github/imr-framework/OCTOPUS"}, {"uid": "github/j-erler/pymf", "html_url": "https://rseng.github.io/software/repository/github/j-erler/pymf", "api_url": "https://rseng.github.io/software/api/repos/github/j-erler/pymf"}, {"uid": "github/networkx/networkx", "html_url": "https://rseng.github.io/software/repository/github/networkx/networkx", "api_url": "https://rseng.github.io/software/api/repos/github/networkx/networkx"}, {"uid": "github/opimwue/ddop", "html_url": "https://rseng.github.io/software/repository/github/opimwue/ddop", "api_url": "https://rseng.github.io/software/api/repos/github/opimwue/ddop"}, {"uid": "github/joe-antognini/kozai", "html_url": "https://rseng.github.io/software/repository/github/joe-antognini/kozai", "api_url": "https://rseng.github.io/software/api/repos/github/joe-antognini/kozai"}, {"uid": "github/psheehan/pdspy", "html_url": "https://rseng.github.io/software/repository/github/psheehan/pdspy", "api_url": "https://rseng.github.io/software/api/repos/github/psheehan/pdspy"}, {"uid": "github/mischaschirmer/nebular", "html_url": "https://rseng.github.io/software/repository/github/mischaschirmer/nebular", "api_url": "https://rseng.github.io/software/api/repos/github/mischaschirmer/nebular"}, {"uid": "github/pennsignals/chime", "html_url": "https://rseng.github.io/software/repository/github/pennsignals/chime", "api_url": "https://rseng.github.io/software/api/repos/github/pennsignals/chime"}, {"uid": "github/yangfangs/test_GFICLEE", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/test_GFICLEE", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/test_GFICLEE"}, {"uid": "github/yangfangs/KPP", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/KPP", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/KPP"}, {"uid": "github/arpan-52/Finalflash", "html_url": "https://rseng.github.io/software/repository/github/arpan-52/Finalflash", "api_url": "https://rseng.github.io/software/api/repos/github/arpan-52/Finalflash"}, {"uid": "github/OpenWaterAnalytics/EPyT", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/EPyT", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/EPyT"}, {"uid": "github/OpenWaterAnalytics/pyswmm", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/pyswmm", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/pyswmm"}, {"uid": "github/Freakwill/pyrimidine", "html_url": "https://rseng.github.io/software/repository/github/Freakwill/pyrimidine", "api_url": "https://rseng.github.io/software/api/repos/github/Freakwill/pyrimidine"}, {"uid": "github/kibokov/grumpy", "html_url": "https://rseng.github.io/software/repository/github/kibokov/grumpy", "api_url": "https://rseng.github.io/software/api/repos/github/kibokov/grumpy"}, {"uid": "github/duffell/Duffell_Gap", "html_url": "https://rseng.github.io/software/repository/github/duffell/Duffell_Gap", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Duffell_Gap"}, {"uid": "github/duffell/RT1D", "html_url": "https://rseng.github.io/software/repository/github/duffell/RT1D", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/RT1D"}, {"uid": "github/duffell/Disco", "html_url": "https://rseng.github.io/software/repository/github/duffell/Disco", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Disco"}, {"uid": "github/gtayana/CVRMS", "html_url": "https://rseng.github.io/software/repository/github/gtayana/CVRMS", "api_url": "https://rseng.github.io/software/api/repos/github/gtayana/CVRMS"}, {"uid": "github/mranuraggarg/supernovae_classification", "html_url": "https://rseng.github.io/software/repository/github/mranuraggarg/supernovae_classification", "api_url": "https://rseng.github.io/software/api/repos/github/mranuraggarg/supernovae_classification"}, {"uid": "github/alstat/ALUES", "html_url": "https://rseng.github.io/software/repository/github/alstat/ALUES", "api_url": "https://rseng.github.io/software/api/repos/github/alstat/ALUES"}, {"uid": "github/PRIS-CV/DS-UI", "html_url": "https://rseng.github.io/software/repository/github/PRIS-CV/DS-UI", "api_url": "https://rseng.github.io/software/api/repos/github/PRIS-CV/DS-UI"}, {"uid": "github/PhaseTracer/PhaseTracer", "html_url": "https://rseng.github.io/software/repository/github/PhaseTracer/PhaseTracer", "api_url": "https://rseng.github.io/software/api/repos/github/PhaseTracer/PhaseTracer"}, {"uid": "github/selkamand/ggoncoplot", "html_url": "https://rseng.github.io/software/repository/github/selkamand/ggoncoplot", "api_url": "https://rseng.github.io/software/api/repos/github/selkamand/ggoncoplot"}, {"uid": "github/zkdtc/MLC_ELGs", "html_url": "https://rseng.github.io/software/repository/github/zkdtc/MLC_ELGs", "api_url": "https://rseng.github.io/software/api/repos/github/zkdtc/MLC_ELGs"}, {"uid": "github/jmackereth/orbit-estimation", "html_url": "https://rseng.github.io/software/repository/github/jmackereth/orbit-estimation", "api_url": "https://rseng.github.io/software/api/repos/github/jmackereth/orbit-estimation"}, {"uid": "github/ERA-URBAN/fm128_radar", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/fm128_radar", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/fm128_radar"}, {"uid": "github/ERA-URBAN/netcdf2littler", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/netcdf2littler", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/netcdf2littler"}, {"uid": "github/NeoGeographyToolkit/StereoPipeline", "html_url": "https://rseng.github.io/software/repository/github/NeoGeographyToolkit/StereoPipeline", "api_url": "https://rseng.github.io/software/api/repos/github/NeoGeographyToolkit/StereoPipeline"}, {"uid": "github/telatin/seqfu2", "html_url": "https://rseng.github.io/software/repository/github/telatin/seqfu2", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/seqfu2"}, {"uid": "github/telatin/covtobed", "html_url": "https://rseng.github.io/software/repository/github/telatin/covtobed", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/covtobed"}, {"uid": "github/telatin/bamtocov", "html_url": "https://rseng.github.io/software/repository/github/telatin/bamtocov", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/bamtocov"}, {"uid": "github/telatin/qax", "html_url": "https://rseng.github.io/software/repository/github/telatin/qax", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/qax"}, {"uid": "github/csabiu/kstat", "html_url": "https://rseng.github.io/software/repository/github/csabiu/kstat", "api_url": "https://rseng.github.io/software/api/repos/github/csabiu/kstat"}, {"uid": "github/project-asgard/asgard", "html_url": "https://rseng.github.io/software/repository/github/project-asgard/asgard", "api_url": "https://rseng.github.io/software/api/repos/github/project-asgard/asgard"}, {"uid": "github/jean-pierreBoth/gsearch", "html_url": "https://rseng.github.io/software/repository/github/jean-pierreBoth/gsearch", "api_url": "https://rseng.github.io/software/api/repos/github/jean-pierreBoth/gsearch"}, {"uid": "github/webbjj/m2mcluster", "html_url": "https://rseng.github.io/software/repository/github/webbjj/m2mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/m2mcluster"}, {"uid": "github/webbjj/clustertools", "html_url": "https://rseng.github.io/software/repository/github/webbjj/clustertools", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/clustertools"}, {"uid": "github/revoltek/losoto", "html_url": "https://rseng.github.io/software/repository/github/revoltek/losoto", "api_url": "https://rseng.github.io/software/api/repos/github/revoltek/losoto"}, {"uid": "github/ARDG-NRAO/LibRA", "html_url": "https://rseng.github.io/software/repository/github/ARDG-NRAO/LibRA", "api_url": "https://rseng.github.io/software/api/repos/github/ARDG-NRAO/LibRA"}, {"uid": "github/drphilmarshall/HumVI", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/HumVI", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/HumVI"}, {"uid": "github/drphilmarshall/Pangloss", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/Pangloss", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/Pangloss"}, {"uid": "github/lzkelley/kalepy", "html_url": "https://rseng.github.io/software/repository/github/lzkelley/kalepy", "api_url": "https://rseng.github.io/software/api/repos/github/lzkelley/kalepy"}, {"uid": "github/dhubber/seren", "html_url": "https://rseng.github.io/software/repository/github/dhubber/seren", "api_url": "https://rseng.github.io/software/api/repos/github/dhubber/seren"}, {"uid": "github/dylancromer/maszcal", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/maszcal", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/maszcal"}, {"uid": "github/dylancromer/ostrich", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/ostrich", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/ostrich"}, {"uid": "github/ylxu05/HN-PPISP", "html_url": "https://rseng.github.io/software/repository/github/ylxu05/HN-PPISP", "api_url": "https://rseng.github.io/software/api/repos/github/ylxu05/HN-PPISP"}, {"uid": "github/surhudm/aum", "html_url": "https://rseng.github.io/software/repository/github/surhudm/aum", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/aum"}, {"uid": "github/surhudm/savitzky_golay_with_errors", "html_url": "https://rseng.github.io/software/repository/github/surhudm/savitzky_golay_with_errors", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/savitzky_golay_with_errors"}, {"uid": "github/abatten/fruitbat", "html_url": "https://rseng.github.io/software/repository/github/abatten/fruitbat", "api_url": "https://rseng.github.io/software/api/repos/github/abatten/fruitbat"}, {"uid": "github/mad-lab-fau/tpcp", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/tpcp", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/tpcp"}, {"uid": "github/mad-lab-fau/imucal", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/imucal", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/imucal"}, {"uid": "github/QZH2022/germline_flow", "html_url": "https://rseng.github.io/software/repository/github/QZH2022/germline_flow", "api_url": "https://rseng.github.io/software/api/repos/github/QZH2022/germline_flow"}, {"uid": "github/brandon-rhodes/python-jplephem", "html_url": "https://rseng.github.io/software/repository/github/brandon-rhodes/python-jplephem", "api_url": "https://rseng.github.io/software/api/repos/github/brandon-rhodes/python-jplephem"}, {"uid": "github/SoFiA-Admin/SoFiA-2", "html_url": "https://rseng.github.io/software/repository/github/SoFiA-Admin/SoFiA-2", "api_url": "https://rseng.github.io/software/api/repos/github/SoFiA-Admin/SoFiA-2"}, {"uid": "github/HDFGroup/hdf5", "html_url": "https://rseng.github.io/software/repository/github/HDFGroup/hdf5", "api_url": "https://rseng.github.io/software/api/repos/github/HDFGroup/hdf5"}, {"uid": "github/PacificBiosciences/pbcore", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcore", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcore"}, {"uid": "github/PacificBiosciences/kineticsTools", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/kineticsTools", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/kineticsTools"}, {"uid": "github/PacificBiosciences/IsoSeq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/IsoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/IsoSeq"}, {"uid": "github/PacificBiosciences/minorseq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/minorseq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/minorseq"}, {"uid": "github/PacificBiosciences/pbbioconda", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbioconda", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbioconda"}, {"uid": "github/PacificBiosciences/pbcopper", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcopper", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcopper"}, {"uid": "github/PacificBiosciences/pbbam", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbam", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbam"}, {"uid": "github/PacificBiosciences/blasr", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/blasr"}, {"uid": "github/PacificBiosciences/HiPhase", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/HiPhase", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/HiPhase"}, {"uid": "github/PacificBiosciences/pbalign", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbalign", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbalign"}, {"uid": "github/PacificBiosciences/pbmm2", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbmm2", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbmm2"}, {"uid": "github/PacificBiosciences/FALCON", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/FALCON", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/FALCON"}] +[{"uid": "github/fairdataihub/SPARClink", "html_url": "https://rseng.github.io/software/repository/github/fairdataihub/SPARClink", "api_url": "https://rseng.github.io/software/api/repos/github/fairdataihub/SPARClink"}, {"uid": "github/nansencenter/DAPPER", "html_url": "https://rseng.github.io/software/repository/github/nansencenter/DAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/nansencenter/DAPPER"}, {"uid": "github/jorittmo/singcar", "html_url": "https://rseng.github.io/software/repository/github/jorittmo/singcar", "api_url": "https://rseng.github.io/software/api/repos/github/jorittmo/singcar"}, {"uid": "github/oxpig/ImmuneBuilder", "html_url": "https://rseng.github.io/software/repository/github/oxpig/ImmuneBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/oxpig/ImmuneBuilder"}, {"uid": "github/sjforeman/bskit", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/bskit", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/bskit"}, {"uid": "github/sjforeman/StringFast", "html_url": "https://rseng.github.io/software/repository/github/sjforeman/StringFast", "api_url": "https://rseng.github.io/software/api/repos/github/sjforeman/StringFast"}, {"uid": "github/alexander-mead/HMcode", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/HMcode", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/HMcode"}, {"uid": "github/alexander-mead/collapse", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/collapse", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/collapse"}, {"uid": "github/alexander-mead/pyhalomodel", "html_url": "https://rseng.github.io/software/repository/github/alexander-mead/pyhalomodel", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-mead/pyhalomodel"}, {"uid": "github/range-et/PGL", "html_url": "https://rseng.github.io/software/repository/github/range-et/PGL", "api_url": "https://rseng.github.io/software/api/repos/github/range-et/PGL"}, {"uid": "github/JixingGE/GGCHEMPY", "html_url": "https://rseng.github.io/software/repository/github/JixingGE/GGCHEMPY", "api_url": "https://rseng.github.io/software/api/repos/github/JixingGE/GGCHEMPY"}, {"uid": "github/andreyshabalin/TwinEQTL", "html_url": "https://rseng.github.io/software/repository/github/andreyshabalin/TwinEQTL", "api_url": "https://rseng.github.io/software/api/repos/github/andreyshabalin/TwinEQTL"}, {"uid": "github/myrafproject/myrafproject", "html_url": "https://rseng.github.io/software/repository/github/myrafproject/myrafproject", "api_url": "https://rseng.github.io/software/api/repos/github/myrafproject/myrafproject"}, {"uid": "github/mneeleman/qubefit", "html_url": "https://rseng.github.io/software/repository/github/mneeleman/qubefit", "api_url": "https://rseng.github.io/software/api/repos/github/mneeleman/qubefit"}, {"uid": "github/Hoohm/CITE-seq-Count", "html_url": "https://rseng.github.io/software/repository/github/Hoohm/CITE-seq-Count", "api_url": "https://rseng.github.io/software/api/repos/github/Hoohm/CITE-seq-Count"}, {"uid": "github/mlhutchins/LWPC", "html_url": "https://rseng.github.io/software/repository/github/mlhutchins/LWPC", "api_url": "https://rseng.github.io/software/api/repos/github/mlhutchins/LWPC"}, {"uid": "github/kjschmidlab/GGoutlieR", "html_url": "https://rseng.github.io/software/repository/github/kjschmidlab/GGoutlieR", "api_url": "https://rseng.github.io/software/api/repos/github/kjschmidlab/GGoutlieR"}, {"uid": "github/akikuno/cstag", "html_url": "https://rseng.github.io/software/repository/github/akikuno/cstag", "api_url": "https://rseng.github.io/software/api/repos/github/akikuno/cstag"}, {"uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "html_url": "https://rseng.github.io/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", "api_url": "https://rseng.github.io/software/api/repos/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids"}, {"uid": "github/cpinte/casa_cube", "html_url": "https://rseng.github.io/software/repository/github/cpinte/casa_cube", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/casa_cube"}, {"uid": "github/cpinte/mcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/mcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/mcfost"}, {"uid": "github/cpinte/pymcfost", "html_url": "https://rseng.github.io/software/repository/github/cpinte/pymcfost", "api_url": "https://rseng.github.io/software/api/repos/github/cpinte/pymcfost"}, {"uid": "github/MegaMorph/galapagos-c", "html_url": "https://rseng.github.io/software/repository/github/MegaMorph/galapagos-c", "api_url": "https://rseng.github.io/software/api/repos/github/MegaMorph/galapagos-c"}, {"uid": "github/shihyuntang/igrins_rv", "html_url": "https://rseng.github.io/software/repository/github/shihyuntang/igrins_rv", "api_url": "https://rseng.github.io/software/api/repos/github/shihyuntang/igrins_rv"}, {"uid": "github/Arpitk1001/RotCurveTool", "html_url": "https://rseng.github.io/software/repository/github/Arpitk1001/RotCurveTool", "api_url": "https://rseng.github.io/software/api/repos/github/Arpitk1001/RotCurveTool"}, {"uid": "github/torognes/vsearch", "html_url": "https://rseng.github.io/software/repository/github/torognes/vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/vsearch"}, {"uid": "github/torognes/swarm", "html_url": "https://rseng.github.io/software/repository/github/torognes/swarm", "api_url": "https://rseng.github.io/software/api/repos/github/torognes/swarm"}, {"uid": "github/kavir1698/EvoDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/kavir1698/EvoDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kavir1698/EvoDynamics.jl"}, {"uid": "github/mc-imperial/jfs", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/jfs", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/jfs"}, {"uid": "github/mc-imperial/multicore-test-harness", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/multicore-test-harness", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/multicore-test-harness"}, {"uid": "github/mc-imperial/gpuverify", "html_url": "https://rseng.github.io/software/repository/github/mc-imperial/gpuverify", "api_url": "https://rseng.github.io/software/api/repos/github/mc-imperial/gpuverify"}, {"uid": "github/DSIMB/medusa", "html_url": "https://rseng.github.io/software/repository/github/DSIMB/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/DSIMB/medusa"}, {"uid": "github/santeripuranen/SpydrPick", "html_url": "https://rseng.github.io/software/repository/github/santeripuranen/SpydrPick", "api_url": "https://rseng.github.io/software/api/repos/github/santeripuranen/SpydrPick"}, {"uid": "github/wesleyburr/subMaldi", "html_url": "https://rseng.github.io/software/repository/github/wesleyburr/subMaldi", "api_url": "https://rseng.github.io/software/api/repos/github/wesleyburr/subMaldi"}, {"uid": "github/michaelhb/superplot", "html_url": "https://rseng.github.io/software/repository/github/michaelhb/superplot", "api_url": "https://rseng.github.io/software/api/repos/github/michaelhb/superplot"}, {"uid": "github/MADHATdm/MADHAT", "html_url": "https://rseng.github.io/software/repository/github/MADHATdm/MADHAT", "api_url": "https://rseng.github.io/software/api/repos/github/MADHATdm/MADHAT"}, {"uid": "github/orcasgit/python-fitbit", "html_url": "https://rseng.github.io/software/repository/github/orcasgit/python-fitbit", "api_url": "https://rseng.github.io/software/api/repos/github/orcasgit/python-fitbit"}, {"uid": "github/bempp/kifmm", "html_url": "https://rseng.github.io/software/repository/github/bempp/kifmm", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/kifmm"}, {"uid": "github/bempp/bempp-cl", "html_url": "https://rseng.github.io/software/repository/github/bempp/bempp-cl", "api_url": "https://rseng.github.io/software/api/repos/github/bempp/bempp-cl"}, {"uid": "github/jackmwolf/tehtuner", "html_url": "https://rseng.github.io/software/repository/github/jackmwolf/tehtuner", "api_url": "https://rseng.github.io/software/api/repos/github/jackmwolf/tehtuner"}, {"uid": "github/projectcuisines/thai_trilogy_code", "html_url": "https://rseng.github.io/software/repository/github/projectcuisines/thai_trilogy_code", "api_url": "https://rseng.github.io/software/api/repos/github/projectcuisines/thai_trilogy_code"}, {"uid": "github/JiangFangzhou/SIDM", "html_url": "https://rseng.github.io/software/repository/github/JiangFangzhou/SIDM", "api_url": "https://rseng.github.io/software/api/repos/github/JiangFangzhou/SIDM"}, {"uid": "github/mxwalbert/cohesivm", "html_url": "https://rseng.github.io/software/repository/github/mxwalbert/cohesivm", "api_url": "https://rseng.github.io/software/api/repos/github/mxwalbert/cohesivm"}, {"uid": "github/nbisweden/MrBayes", "html_url": "https://rseng.github.io/software/repository/github/nbisweden/MrBayes", "api_url": "https://rseng.github.io/software/api/repos/github/nbisweden/MrBayes"}, {"uid": "github/NASA-Planetary-Science/Pade-disk-code", "html_url": "https://rseng.github.io/software/repository/github/NASA-Planetary-Science/Pade-disk-code", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-Planetary-Science/Pade-disk-code"}, {"uid": "github/CMakePP/CMakePPLang", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMakePPLang", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMakePPLang"}, {"uid": "github/CMakePP/CMinx", "html_url": "https://rseng.github.io/software/repository/github/CMakePP/CMinx", "api_url": "https://rseng.github.io/software/api/repos/github/CMakePP/CMinx"}, {"uid": "github/tanner-trickle/EXCEED-DM", "html_url": "https://rseng.github.io/software/repository/github/tanner-trickle/EXCEED-DM", "api_url": "https://rseng.github.io/software/api/repos/github/tanner-trickle/EXCEED-DM"}, {"uid": "github/RosettaCommons/RFDesign", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RFDesign", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RFDesign"}, {"uid": "github/RosettaCommons/RoseTTAFold", "html_url": "https://rseng.github.io/software/repository/github/RosettaCommons/RoseTTAFold", "api_url": "https://rseng.github.io/software/api/repos/github/RosettaCommons/RoseTTAFold"}, {"uid": "github/genai-impact/ecologits", "html_url": "https://rseng.github.io/software/repository/github/genai-impact/ecologits", "api_url": "https://rseng.github.io/software/api/repos/github/genai-impact/ecologits"}, {"uid": "github/rice-solar-physics/HYDRAD", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/HYDRAD", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/HYDRAD"}, {"uid": "github/rice-solar-physics/EBTEL", "html_url": "https://rseng.github.io/software/repository/github/rice-solar-physics/EBTEL", "api_url": "https://rseng.github.io/software/api/repos/github/rice-solar-physics/EBTEL"}, {"uid": "github/mathjax/MathJax", "html_url": "https://rseng.github.io/software/repository/github/mathjax/MathJax", "api_url": "https://rseng.github.io/software/api/repos/github/mathjax/MathJax"}, {"uid": "github/bd-j/sedpy", "html_url": "https://rseng.github.io/software/repository/github/bd-j/sedpy", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/sedpy"}, {"uid": "github/bd-j/prospector", "html_url": "https://rseng.github.io/software/repository/github/bd-j/prospector", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/prospector"}, {"uid": "github/bd-j/forcepho", "html_url": "https://rseng.github.io/software/repository/github/bd-j/forcepho", "api_url": "https://rseng.github.io/software/api/repos/github/bd-j/forcepho"}, {"uid": "github/stevenweaver/seqcomplexity", "html_url": "https://rseng.github.io/software/repository/github/stevenweaver/seqcomplexity", "api_url": "https://rseng.github.io/software/api/repos/github/stevenweaver/seqcomplexity"}, {"uid": "github/zhangjunpeng411/Scan", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/Scan", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/Scan"}, {"uid": "github/zhangjunpeng411/SCOM", "html_url": "https://rseng.github.io/software/repository/github/zhangjunpeng411/SCOM", "api_url": "https://rseng.github.io/software/api/repos/github/zhangjunpeng411/SCOM"}, {"uid": "github/MMV-Lab/mmv_im2im", "html_url": "https://rseng.github.io/software/repository/github/MMV-Lab/mmv_im2im", "api_url": "https://rseng.github.io/software/api/repos/github/MMV-Lab/mmv_im2im"}, {"uid": "github/AstrobioMike/GToTree", "html_url": "https://rseng.github.io/software/repository/github/AstrobioMike/GToTree", "api_url": "https://rseng.github.io/software/api/repos/github/AstrobioMike/GToTree"}, {"uid": "github/cmgcds/fastvpinns", "html_url": "https://rseng.github.io/software/repository/github/cmgcds/fastvpinns", "api_url": "https://rseng.github.io/software/api/repos/github/cmgcds/fastvpinns"}, {"uid": "github/Starfish-develop/Starfish", "html_url": "https://rseng.github.io/software/repository/github/Starfish-develop/Starfish", "api_url": "https://rseng.github.io/software/api/repos/github/Starfish-develop/Starfish"}, {"uid": "github/AninaTimmermann/ECCOplanets", "html_url": "https://rseng.github.io/software/repository/github/AninaTimmermann/ECCOplanets", "api_url": "https://rseng.github.io/software/api/repos/github/AninaTimmermann/ECCOplanets"}, {"uid": "github/yangfangs/KPP", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/KPP", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/KPP"}, {"uid": "github/yangfangs/test_GFICLEE", "html_url": "https://rseng.github.io/software/repository/github/yangfangs/test_GFICLEE", "api_url": "https://rseng.github.io/software/api/repos/github/yangfangs/test_GFICLEE"}, {"uid": "github/retostauffer/python-colorspace", "html_url": "https://rseng.github.io/software/repository/github/retostauffer/python-colorspace", "api_url": "https://rseng.github.io/software/api/repos/github/retostauffer/python-colorspace"}, {"uid": "github/pysam-developers/pysam", "html_url": "https://rseng.github.io/software/repository/github/pysam-developers/pysam", "api_url": "https://rseng.github.io/software/api/repos/github/pysam-developers/pysam"}, {"uid": "github/christopherburke/tess-point", "html_url": "https://rseng.github.io/software/repository/github/christopherburke/tess-point", "api_url": "https://rseng.github.io/software/api/repos/github/christopherburke/tess-point"}, {"uid": "github/MaayanLab/signature-commons-ui", "html_url": "https://rseng.github.io/software/repository/github/MaayanLab/signature-commons-ui", "api_url": "https://rseng.github.io/software/api/repos/github/MaayanLab/signature-commons-ui"}, {"uid": "github/staphopia/staphopia-paper", "html_url": "https://rseng.github.io/software/repository/github/staphopia/staphopia-paper", "api_url": "https://rseng.github.io/software/api/repos/github/staphopia/staphopia-paper"}, {"uid": "github/DESI-UR/VAST", "html_url": "https://rseng.github.io/software/repository/github/DESI-UR/VAST", "api_url": "https://rseng.github.io/software/api/repos/github/DESI-UR/VAST"}, {"uid": "github/bbbbbbzhou/MDPET", "html_url": "https://rseng.github.io/software/repository/github/bbbbbbzhou/MDPET", "api_url": "https://rseng.github.io/software/api/repos/github/bbbbbbzhou/MDPET"}, {"uid": "github/EMSL-Computing/Pore2Chip", "html_url": "https://rseng.github.io/software/repository/github/EMSL-Computing/Pore2Chip", "api_url": "https://rseng.github.io/software/api/repos/github/EMSL-Computing/Pore2Chip"}, {"uid": "github/wmglab-duke/ascent", "html_url": "https://rseng.github.io/software/repository/github/wmglab-duke/ascent", "api_url": "https://rseng.github.io/software/api/repos/github/wmglab-duke/ascent"}, {"uid": "github/keatonb/Pyriod", "html_url": "https://rseng.github.io/software/repository/github/keatonb/Pyriod", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/Pyriod"}, {"uid": "github/keatonb/TESS_PRF", "html_url": "https://rseng.github.io/software/repository/github/keatonb/TESS_PRF", "api_url": "https://rseng.github.io/software/api/repos/github/keatonb/TESS_PRF"}, {"uid": "github/casaluca/bolometric-corrections", "html_url": "https://rseng.github.io/software/repository/github/casaluca/bolometric-corrections", "api_url": "https://rseng.github.io/software/api/repos/github/casaluca/bolometric-corrections"}, {"uid": "github/circuitgraph/circuitgraph", "html_url": "https://rseng.github.io/software/repository/github/circuitgraph/circuitgraph", "api_url": "https://rseng.github.io/software/api/repos/github/circuitgraph/circuitgraph"}, {"uid": "github/ideasrule/platon", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/platon", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/platon"}, {"uid": "github/ideasrule/pyTPCI", "html_url": "https://rseng.github.io/software/repository/github/ideasrule/pyTPCI", "api_url": "https://rseng.github.io/software/api/repos/github/ideasrule/pyTPCI"}, {"uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", "html_url": "https://rseng.github.io/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", "api_url": "https://rseng.github.io/software/api/repos/github/joergbuchwald/joss_ogs6py_VTUinterface"}, {"uid": "github/markheckmann/OpenRepGrid.ic", "html_url": "https://rseng.github.io/software/repository/github/markheckmann/OpenRepGrid.ic", "api_url": "https://rseng.github.io/software/api/repos/github/markheckmann/OpenRepGrid.ic"}, {"uid": "github/Extraweich/homopy", "html_url": "https://rseng.github.io/software/repository/github/Extraweich/homopy", "api_url": "https://rseng.github.io/software/api/repos/github/Extraweich/homopy"}, {"uid": "github/thomgrand/fim-python", "html_url": "https://rseng.github.io/software/repository/github/thomgrand/fim-python", "api_url": "https://rseng.github.io/software/api/repos/github/thomgrand/fim-python"}, {"uid": "github/databio/GenomicDistributions", "html_url": "https://rseng.github.io/software/repository/github/databio/GenomicDistributions", "api_url": "https://rseng.github.io/software/api/repos/github/databio/GenomicDistributions"}, {"uid": "github/PyFstat/PyFstat", "html_url": "https://rseng.github.io/software/repository/github/PyFstat/PyFstat", "api_url": "https://rseng.github.io/software/api/repos/github/PyFstat/PyFstat"}, {"uid": "github/EdgeVPNio/evio", "html_url": "https://rseng.github.io/software/repository/github/EdgeVPNio/evio", "api_url": "https://rseng.github.io/software/api/repos/github/EdgeVPNio/evio"}, {"uid": "github/SamDuffield/bmm", "html_url": "https://rseng.github.io/software/repository/github/SamDuffield/bmm", "api_url": "https://rseng.github.io/software/api/repos/github/SamDuffield/bmm"}, {"uid": "github/fmihpc/vlasiator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/vlasiator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/vlasiator"}, {"uid": "github/fmihpc/analysator", "html_url": "https://rseng.github.io/software/repository/github/fmihpc/analysator", "api_url": "https://rseng.github.io/software/api/repos/github/fmihpc/analysator"}, {"uid": "github/jet-net/JetNet", "html_url": "https://rseng.github.io/software/repository/github/jet-net/JetNet", "api_url": "https://rseng.github.io/software/api/repos/github/jet-net/JetNet"}, {"uid": "github/druglogics/pydruglogics", "html_url": "https://rseng.github.io/software/repository/github/druglogics/pydruglogics", "api_url": "https://rseng.github.io/software/api/repos/github/druglogics/pydruglogics"}, {"uid": "github/seqan/flexbar", "html_url": "https://rseng.github.io/software/repository/github/seqan/flexbar", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/flexbar"}, {"uid": "github/seqan/lambda", "html_url": "https://rseng.github.io/software/repository/github/seqan/lambda", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lambda"}, {"uid": "github/seqan/lara", "html_url": "https://rseng.github.io/software/repository/github/seqan/lara", "api_url": "https://rseng.github.io/software/api/repos/github/seqan/lara"}, {"uid": "github/timoast/signac", "html_url": "https://rseng.github.io/software/repository/github/timoast/signac", "api_url": "https://rseng.github.io/software/api/repos/github/timoast/signac"}, {"uid": "github/cov-ert/gofasta", "html_url": "https://rseng.github.io/software/repository/github/cov-ert/gofasta", "api_url": "https://rseng.github.io/software/api/repos/github/cov-ert/gofasta"}, {"uid": "github/Starlink/starlink", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starlink", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starlink"}, {"uid": "github/Starlink/aspic", "html_url": "https://rseng.github.io/software/repository/github/Starlink/aspic", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/aspic"}, {"uid": "github/Starlink/hds-v5", "html_url": "https://rseng.github.io/software/repository/github/Starlink/hds-v5", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/hds-v5"}, {"uid": "github/Starlink/pal", "html_url": "https://rseng.github.io/software/repository/github/Starlink/pal", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/pal"}, {"uid": "github/Starlink/palpy", "html_url": "https://rseng.github.io/software/repository/github/Starlink/palpy", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/palpy"}, {"uid": "github/Starlink/perl-Starlink-Autoastrom", "html_url": "https://rseng.github.io/software/repository/github/Starlink/perl-Starlink-Autoastrom", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/perl-Starlink-Autoastrom"}, {"uid": "github/Starlink/ORAC-DR", "html_url": "https://rseng.github.io/software/repository/github/Starlink/ORAC-DR", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/ORAC-DR"}, {"uid": "github/Starlink/starjava", "html_url": "https://rseng.github.io/software/repository/github/Starlink/starjava", "api_url": "https://rseng.github.io/software/api/repos/github/Starlink/starjava"}, {"uid": "github/daiqile96/OTTERS_paper", "html_url": "https://rseng.github.io/software/repository/github/daiqile96/OTTERS_paper", "api_url": "https://rseng.github.io/software/api/repos/github/daiqile96/OTTERS_paper"}, {"uid": "github/WMD-group/CarrierCapture.jl", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/CarrierCapture.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/CarrierCapture.jl"}, {"uid": "github/WMD-group/hybrid-perovskites", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/hybrid-perovskites", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/hybrid-perovskites"}, {"uid": "github/WMD-group/SMACT", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/SMACT", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/SMACT"}, {"uid": "github/WMD-group/StarryNight", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/StarryNight", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/StarryNight"}, {"uid": "github/WMD-group/MacroDensity", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/MacroDensity", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/MacroDensity"}, {"uid": "github/WMD-group/Eris", "html_url": "https://rseng.github.io/software/repository/github/WMD-group/Eris", "api_url": "https://rseng.github.io/software/api/repos/github/WMD-group/Eris"}, {"uid": "github/adbar/htmldate", "html_url": "https://rseng.github.io/software/repository/github/adbar/htmldate", "api_url": "https://rseng.github.io/software/api/repos/github/adbar/htmldate"}, {"uid": "github/dansarie/sboxgates", "html_url": "https://rseng.github.io/software/repository/github/dansarie/sboxgates", "api_url": "https://rseng.github.io/software/api/repos/github/dansarie/sboxgates"}, {"uid": "github/cbirdferrer/collatrix", "html_url": "https://rseng.github.io/software/repository/github/cbirdferrer/collatrix", "api_url": "https://rseng.github.io/software/api/repos/github/cbirdferrer/collatrix"}, {"uid": "github/fmicompbio/ez_zarr", "html_url": "https://rseng.github.io/software/repository/github/fmicompbio/ez_zarr", "api_url": "https://rseng.github.io/software/api/repos/github/fmicompbio/ez_zarr"}, {"uid": "github/OpenEnergyPlatform/open-MaStR", "html_url": "https://rseng.github.io/software/repository/github/OpenEnergyPlatform/open-MaStR", "api_url": "https://rseng.github.io/software/api/repos/github/OpenEnergyPlatform/open-MaStR"}, {"uid": "github/pyplati/platipy", "html_url": "https://rseng.github.io/software/repository/github/pyplati/platipy", "api_url": "https://rseng.github.io/software/api/repos/github/pyplati/platipy"}, {"uid": "github/rvandewater/ReciPies", "html_url": "https://rseng.github.io/software/repository/github/rvandewater/ReciPies", "api_url": "https://rseng.github.io/software/api/repos/github/rvandewater/ReciPies"}, {"uid": "github/kokron/anzu", "html_url": "https://rseng.github.io/software/repository/github/kokron/anzu", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/anzu"}, {"uid": "github/kokron/skyLine", "html_url": "https://rseng.github.io/software/repository/github/kokron/skyLine", "api_url": "https://rseng.github.io/software/api/repos/github/kokron/skyLine"}, {"uid": "github/CSi-Studio/G-Aligner", "html_url": "https://rseng.github.io/software/repository/github/CSi-Studio/G-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/CSi-Studio/G-Aligner"}, {"uid": "github/EdanRein/pyPplusS", "html_url": "https://rseng.github.io/software/repository/github/EdanRein/pyPplusS", "api_url": "https://rseng.github.io/software/api/repos/github/EdanRein/pyPplusS"}, {"uid": "github/yair111/AnalyticLC", "html_url": "https://rseng.github.io/software/repository/github/yair111/AnalyticLC", "api_url": "https://rseng.github.io/software/api/repos/github/yair111/AnalyticLC"}, {"uid": "github/gymreklab/GangSTR", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/GangSTR", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/GangSTR"}, {"uid": "github/gymreklab/chips", "html_url": "https://rseng.github.io/software/repository/github/gymreklab/chips", "api_url": "https://rseng.github.io/software/api/repos/github/gymreklab/chips"}, {"uid": "github/blobtoolkit/viewer", "html_url": "https://rseng.github.io/software/repository/github/blobtoolkit/viewer", "api_url": "https://rseng.github.io/software/api/repos/github/blobtoolkit/viewer"}, {"uid": "github/kristiantcho/flashcurve", "html_url": "https://rseng.github.io/software/repository/github/kristiantcho/flashcurve", "api_url": "https://rseng.github.io/software/api/repos/github/kristiantcho/flashcurve"}, {"uid": "github/miRTop/mirtop", "html_url": "https://rseng.github.io/software/repository/github/miRTop/mirtop", "api_url": "https://rseng.github.io/software/api/repos/github/miRTop/mirtop"}, {"uid": "github/ejikeugba/serp", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/serp", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/serp"}, {"uid": "github/ejikeugba/gofcat", "html_url": "https://rseng.github.io/software/repository/github/ejikeugba/gofcat", "api_url": "https://rseng.github.io/software/api/repos/github/ejikeugba/gofcat"}, {"uid": "github/m-shahbaz-kharal/LiGuard-JOSS", "html_url": "https://rseng.github.io/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", "api_url": "https://rseng.github.io/software/api/repos/github/m-shahbaz-kharal/LiGuard-JOSS"}, {"uid": "github/danhey/maelstrom", "html_url": "https://rseng.github.io/software/repository/github/danhey/maelstrom", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/maelstrom"}, {"uid": "github/danhey/echelle", "html_url": "https://rseng.github.io/software/repository/github/danhey/echelle", "api_url": "https://rseng.github.io/software/api/repos/github/danhey/echelle"}, {"uid": "github/david-deboer/radiobear", "html_url": "https://rseng.github.io/software/repository/github/david-deboer/radiobear", "api_url": "https://rseng.github.io/software/api/repos/github/david-deboer/radiobear"}, {"uid": "github/astrorama/sourcextractorplusplus", "html_url": "https://rseng.github.io/software/repository/github/astrorama/sourcextractorplusplus", "api_url": "https://rseng.github.io/software/api/repos/github/astrorama/sourcextractorplusplus"}, {"uid": "github/nliulab/HRnV-Calc", "html_url": "https://rseng.github.io/software/repository/github/nliulab/HRnV-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/nliulab/HRnV-Calc"}, {"uid": "github/c-white/blacklight", "html_url": "https://rseng.github.io/software/repository/github/c-white/blacklight", "api_url": "https://rseng.github.io/software/api/repos/github/c-white/blacklight"}, {"uid": "github/JieweiHuang/Coport", "html_url": "https://rseng.github.io/software/repository/github/JieweiHuang/Coport", "api_url": "https://rseng.github.io/software/api/repos/github/JieweiHuang/Coport"}, {"uid": "github/iAART/aart", "html_url": "https://rseng.github.io/software/repository/github/iAART/aart", "api_url": "https://rseng.github.io/software/api/repos/github/iAART/aart"}, {"uid": "github/snad-space/coniferest", "html_url": "https://rseng.github.io/software/repository/github/snad-space/coniferest", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/coniferest"}, {"uid": "github/snad-space/ztf-viewer", "html_url": "https://rseng.github.io/software/repository/github/snad-space/ztf-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/ztf-viewer"}, {"uid": "github/snad-space/zwad", "html_url": "https://rseng.github.io/software/repository/github/snad-space/zwad", "api_url": "https://rseng.github.io/software/api/repos/github/snad-space/zwad"}, {"uid": "github/klevis-a/kinematics-vis", "html_url": "https://rseng.github.io/software/repository/github/klevis-a/kinematics-vis", "api_url": "https://rseng.github.io/software/api/repos/github/klevis-a/kinematics-vis"}, {"uid": "github/xcompact3d/Incompact3d", "html_url": "https://rseng.github.io/software/repository/github/xcompact3d/Incompact3d", "api_url": "https://rseng.github.io/software/api/repos/github/xcompact3d/Incompact3d"}, {"uid": "github/chenwuperth/rgz_rcnn", "html_url": "https://rseng.github.io/software/repository/github/chenwuperth/rgz_rcnn", "api_url": "https://rseng.github.io/software/api/repos/github/chenwuperth/rgz_rcnn"}, {"uid": "github/YosefLab/scvi-tools", "html_url": "https://rseng.github.io/software/repository/github/YosefLab/scvi-tools", "api_url": "https://rseng.github.io/software/api/repos/github/YosefLab/scvi-tools"}, {"uid": "github/PeterBartram/TES", "html_url": "https://rseng.github.io/software/repository/github/PeterBartram/TES", "api_url": "https://rseng.github.io/software/api/repos/github/PeterBartram/TES"}, {"uid": "github/sherpa-deproject/deproject", "html_url": "https://rseng.github.io/software/repository/github/sherpa-deproject/deproject", "api_url": "https://rseng.github.io/software/api/repos/github/sherpa-deproject/deproject"}, {"uid": "github/adithirgis/pollucheck", "html_url": "https://rseng.github.io/software/repository/github/adithirgis/pollucheck", "api_url": "https://rseng.github.io/software/api/repos/github/adithirgis/pollucheck"}, {"uid": "github/1313e/PRISM", "html_url": "https://rseng.github.io/software/repository/github/1313e/PRISM", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/PRISM"}, {"uid": "github/1313e/CMasher", "html_url": "https://rseng.github.io/software/repository/github/1313e/CMasher", "api_url": "https://rseng.github.io/software/api/repos/github/1313e/CMasher"}, {"uid": "github/SciLifeLab/TIDDIT", "html_url": "https://rseng.github.io/software/repository/github/SciLifeLab/TIDDIT", "api_url": "https://rseng.github.io/software/api/repos/github/SciLifeLab/TIDDIT"}, {"uid": "github/najoshi/sickle", "html_url": "https://rseng.github.io/software/repository/github/najoshi/sickle", "api_url": "https://rseng.github.io/software/api/repos/github/najoshi/sickle"}, {"uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", "html_url": "https://rseng.github.io/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", "api_url": "https://rseng.github.io/software/api/repos/github/BlackHolePerturbationToolkit/KerrGeoPy"}, {"uid": "github/meenakshi-kushwaha/mmaqshiny", "html_url": "https://rseng.github.io/software/repository/github/meenakshi-kushwaha/mmaqshiny", "api_url": "https://rseng.github.io/software/api/repos/github/meenakshi-kushwaha/mmaqshiny"}, {"uid": "github/asntech/intervene", "html_url": "https://rseng.github.io/software/repository/github/asntech/intervene", "api_url": "https://rseng.github.io/software/api/repos/github/asntech/intervene"}, {"uid": "github/ProSolo/prosolo", "html_url": "https://rseng.github.io/software/repository/github/ProSolo/prosolo", "api_url": "https://rseng.github.io/software/api/repos/github/ProSolo/prosolo"}, {"uid": "github/XuhanLiu/DrugEx", "html_url": "https://rseng.github.io/software/repository/github/XuhanLiu/DrugEx", "api_url": "https://rseng.github.io/software/api/repos/github/XuhanLiu/DrugEx"}, {"uid": "github/lucaskorol21/GO-RXR", "html_url": "https://rseng.github.io/software/repository/github/lucaskorol21/GO-RXR", "api_url": "https://rseng.github.io/software/api/repos/github/lucaskorol21/GO-RXR"}, {"uid": "github/muctadir/lama", "html_url": "https://rseng.github.io/software/repository/github/muctadir/lama", "api_url": "https://rseng.github.io/software/api/repos/github/muctadir/lama"}, {"uid": "github/ECSHackWeek/impedance.py", "html_url": "https://rseng.github.io/software/repository/github/ECSHackWeek/impedance.py", "api_url": "https://rseng.github.io/software/api/repos/github/ECSHackWeek/impedance.py"}, {"uid": "github/mscroggs/symfem", "html_url": "https://rseng.github.io/software/repository/github/mscroggs/symfem", "api_url": "https://rseng.github.io/software/api/repos/github/mscroggs/symfem"}, {"uid": "github/hjozwiak-umk/bigos_h2he", "html_url": "https://rseng.github.io/software/repository/github/hjozwiak-umk/bigos_h2he", "api_url": "https://rseng.github.io/software/api/repos/github/hjozwiak-umk/bigos_h2he"}, {"uid": "github/SotaYoshida/NuclearToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/SotaYoshida/NuclearToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SotaYoshida/NuclearToolkit.jl"}, {"uid": "github/cvjena/JeFaPaTo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/JeFaPaTo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/JeFaPaTo"}, {"uid": "github/cvjena/freestylo", "html_url": "https://rseng.github.io/software/repository/github/cvjena/freestylo", "api_url": "https://rseng.github.io/software/api/repos/github/cvjena/freestylo"}, {"uid": "github/mlinderm/npsv", "html_url": "https://rseng.github.io/software/repository/github/mlinderm/npsv", "api_url": "https://rseng.github.io/software/api/repos/github/mlinderm/npsv"}, {"uid": "github/thomasdenecker/START-R", "html_url": "https://rseng.github.io/software/repository/github/thomasdenecker/START-R", "api_url": "https://rseng.github.io/software/api/repos/github/thomasdenecker/START-R"}, {"uid": "github/mcsiple/mmrefpoints", "html_url": "https://rseng.github.io/software/repository/github/mcsiple/mmrefpoints", "api_url": "https://rseng.github.io/software/api/repos/github/mcsiple/mmrefpoints"}, {"uid": "github/rksyouyou/SASOM-analysis", "html_url": "https://rseng.github.io/software/repository/github/rksyouyou/SASOM-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/rksyouyou/SASOM-analysis"}, {"uid": "github/ACTCollaboration/zCluster", "html_url": "https://rseng.github.io/software/repository/github/ACTCollaboration/zCluster", "api_url": "https://rseng.github.io/software/api/repos/github/ACTCollaboration/zCluster"}, {"uid": "github/labjg/fibmeasure", "html_url": "https://rseng.github.io/software/repository/github/labjg/fibmeasure", "api_url": "https://rseng.github.io/software/api/repos/github/labjg/fibmeasure"}, {"uid": "github/kungfugo/BellDiagonalQudits.jl", "html_url": "https://rseng.github.io/software/repository/github/kungfugo/BellDiagonalQudits.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kungfugo/BellDiagonalQudits.jl"}, {"uid": "github/artis-mcrt/artis", "html_url": "https://rseng.github.io/software/repository/github/artis-mcrt/artis", "api_url": "https://rseng.github.io/software/api/repos/github/artis-mcrt/artis"}, {"uid": "github/brackham/speclib", "html_url": "https://rseng.github.io/software/repository/github/brackham/speclib", "api_url": "https://rseng.github.io/software/api/repos/github/brackham/speclib"}, {"uid": "github/ThibaultFillion/strengths", "html_url": "https://rseng.github.io/software/repository/github/ThibaultFillion/strengths", "api_url": "https://rseng.github.io/software/api/repos/github/ThibaultFillion/strengths"}, {"uid": "github/iterize/tenta", "html_url": "https://rseng.github.io/software/repository/github/iterize/tenta", "api_url": "https://rseng.github.io/software/api/repos/github/iterize/tenta"}, {"uid": "github/CarlosCoba/XookSuut-code", "html_url": "https://rseng.github.io/software/repository/github/CarlosCoba/XookSuut-code", "api_url": "https://rseng.github.io/software/api/repos/github/CarlosCoba/XookSuut-code"}, {"uid": "github/jczarnowski/DeepFactors", "html_url": "https://rseng.github.io/software/repository/github/jczarnowski/DeepFactors", "api_url": "https://rseng.github.io/software/api/repos/github/jczarnowski/DeepFactors"}, {"uid": "github/Singh-Lab/uKIN", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/uKIN", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/uKIN"}, {"uid": "github/Singh-Lab/DeMaSk", "html_url": "https://rseng.github.io/software/repository/github/Singh-Lab/DeMaSk", "api_url": "https://rseng.github.io/software/api/repos/github/Singh-Lab/DeMaSk"}, {"uid": "github/arhstevens/DarkSage", "html_url": "https://rseng.github.io/software/repository/github/arhstevens/DarkSage", "api_url": "https://rseng.github.io/software/api/repos/github/arhstevens/DarkSage"}, {"uid": "github/bio-ontology-research-group/deepgoplus", "html_url": "https://rseng.github.io/software/repository/github/bio-ontology-research-group/deepgoplus", "api_url": "https://rseng.github.io/software/api/repos/github/bio-ontology-research-group/deepgoplus"}, {"uid": "github/zhoulinumass/ML-wPBE", "html_url": "https://rseng.github.io/software/repository/github/zhoulinumass/ML-wPBE", "api_url": "https://rseng.github.io/software/api/repos/github/zhoulinumass/ML-wPBE"}, {"uid": "github/emossoux/LIFELINE", "html_url": "https://rseng.github.io/software/repository/github/emossoux/LIFELINE", "api_url": "https://rseng.github.io/software/api/repos/github/emossoux/LIFELINE"}, {"uid": "github/adrientaudiere/MiscMetabar", "html_url": "https://rseng.github.io/software/repository/github/adrientaudiere/MiscMetabar", "api_url": "https://rseng.github.io/software/api/repos/github/adrientaudiere/MiscMetabar"}, {"uid": "github/Jane110111107/IsoTree", "html_url": "https://rseng.github.io/software/repository/github/Jane110111107/IsoTree", "api_url": "https://rseng.github.io/software/api/repos/github/Jane110111107/IsoTree"}, {"uid": "github/AlexMikes/AutoFunc", "html_url": "https://rseng.github.io/software/repository/github/AlexMikes/AutoFunc", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMikes/AutoFunc"}, {"uid": "github/SpeedyWeather/SpeedyWeather.jl", "html_url": "https://rseng.github.io/software/repository/github/SpeedyWeather/SpeedyWeather.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SpeedyWeather/SpeedyWeather.jl"}, {"uid": "github/PyTomography/slicer_spect_recon", "html_url": "https://rseng.github.io/software/repository/github/PyTomography/slicer_spect_recon", "api_url": "https://rseng.github.io/software/api/repos/github/PyTomography/slicer_spect_recon"}, {"uid": "github/joshjchayes/TransitFit", "html_url": "https://rseng.github.io/software/repository/github/joshjchayes/TransitFit", "api_url": "https://rseng.github.io/software/api/repos/github/joshjchayes/TransitFit"}, {"uid": "github/nivha/three_body_integration", "html_url": "https://rseng.github.io/software/repository/github/nivha/three_body_integration", "api_url": "https://rseng.github.io/software/api/repos/github/nivha/three_body_integration"}, {"uid": "github/PTsolvers/JustRelax.jl", "html_url": "https://rseng.github.io/software/repository/github/PTsolvers/JustRelax.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PTsolvers/JustRelax.jl"}, {"uid": "github/rabrahm/zaspe", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/zaspe", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/zaspe"}, {"uid": "github/rabrahm/ceres", "html_url": "https://rseng.github.io/software/repository/github/rabrahm/ceres", "api_url": "https://rseng.github.io/software/api/repos/github/rabrahm/ceres"}, {"uid": "github/mischaschirmer/nebular", "html_url": "https://rseng.github.io/software/repository/github/mischaschirmer/nebular", "api_url": "https://rseng.github.io/software/api/repos/github/mischaschirmer/nebular"}, {"uid": "github/pyspeckit/pyspeckit", "html_url": "https://rseng.github.io/software/repository/github/pyspeckit/pyspeckit", "api_url": "https://rseng.github.io/software/api/repos/github/pyspeckit/pyspeckit"}, {"uid": "github/easystats/effectsize", "html_url": "https://rseng.github.io/software/repository/github/easystats/effectsize", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/effectsize"}, {"uid": "github/easystats/modelbased", "html_url": "https://rseng.github.io/software/repository/github/easystats/modelbased", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/modelbased"}, {"uid": "github/easystats/parameters", "html_url": "https://rseng.github.io/software/repository/github/easystats/parameters", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/parameters"}, {"uid": "github/easystats/correlation", "html_url": "https://rseng.github.io/software/repository/github/easystats/correlation", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/correlation"}, {"uid": "github/easystats/performance", "html_url": "https://rseng.github.io/software/repository/github/easystats/performance", "api_url": "https://rseng.github.io/software/api/repos/github/easystats/performance"}, {"uid": "github/STOmics/cs-benchmark", "html_url": "https://rseng.github.io/software/repository/github/STOmics/cs-benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/cs-benchmark"}, {"uid": "github/STOmics/EAGS", "html_url": "https://rseng.github.io/software/repository/github/STOmics/EAGS", "api_url": "https://rseng.github.io/software/api/repos/github/STOmics/EAGS"}, {"uid": "github/bessagroup/f3dasm", "html_url": "https://rseng.github.io/software/repository/github/bessagroup/f3dasm", "api_url": "https://rseng.github.io/software/api/repos/github/bessagroup/f3dasm"}, {"uid": "github/sdnjly/WSDL-AD", "html_url": "https://rseng.github.io/software/repository/github/sdnjly/WSDL-AD", "api_url": "https://rseng.github.io/software/api/repos/github/sdnjly/WSDL-AD"}, {"uid": "github/tbisbas/PDFchem", "html_url": "https://rseng.github.io/software/repository/github/tbisbas/PDFchem", "api_url": "https://rseng.github.io/software/api/repos/github/tbisbas/PDFchem"}, {"uid": "github/ArisTr/PyRaTE", "html_url": "https://rseng.github.io/software/repository/github/ArisTr/PyRaTE", "api_url": "https://rseng.github.io/software/api/repos/github/ArisTr/PyRaTE"}, {"uid": "github/jacksund/simmate", "html_url": "https://rseng.github.io/software/repository/github/jacksund/simmate", "api_url": "https://rseng.github.io/software/api/repos/github/jacksund/simmate"}, {"uid": "github/chihchunhsu/smart", "html_url": "https://rseng.github.io/software/repository/github/chihchunhsu/smart", "api_url": "https://rseng.github.io/software/api/repos/github/chihchunhsu/smart"}, {"uid": "github/fcs-analysis/PyScanFCS", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyScanFCS", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyScanFCS"}, {"uid": "github/fcs-analysis/PyCorrFit", "html_url": "https://rseng.github.io/software/repository/github/fcs-analysis/PyCorrFit", "api_url": "https://rseng.github.io/software/api/repos/github/fcs-analysis/PyCorrFit"}, {"uid": "github/biocircuits/bioscrape", "html_url": "https://rseng.github.io/software/repository/github/biocircuits/bioscrape", "api_url": "https://rseng.github.io/software/api/repos/github/biocircuits/bioscrape"}, {"uid": "github/abschneider/StrainHub", "html_url": "https://rseng.github.io/software/repository/github/abschneider/StrainHub", "api_url": "https://rseng.github.io/software/api/repos/github/abschneider/StrainHub"}, {"uid": "github/skendrew/midIR_sensitivity", "html_url": "https://rseng.github.io/software/repository/github/skendrew/midIR_sensitivity", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/midIR_sensitivity"}, {"uid": "github/skendrew/milkywayproject_triggering", "html_url": "https://rseng.github.io/software/repository/github/skendrew/milkywayproject_triggering", "api_url": "https://rseng.github.io/software/api/repos/github/skendrew/milkywayproject_triggering"}, {"uid": "github/Teichlab/bin2cell", "html_url": "https://rseng.github.io/software/repository/github/Teichlab/bin2cell", "api_url": "https://rseng.github.io/software/api/repos/github/Teichlab/bin2cell"}, {"uid": "github/scipion-em/scipion-em-continuousflex", "html_url": "https://rseng.github.io/software/repository/github/scipion-em/scipion-em-continuousflex", "api_url": "https://rseng.github.io/software/api/repos/github/scipion-em/scipion-em-continuousflex"}, {"uid": "github/Michalychforever/AsPy", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/AsPy", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/AsPy"}, {"uid": "github/Michalychforever/CLASS_LVDM", "html_url": "https://rseng.github.io/software/repository/github/Michalychforever/CLASS_LVDM", "api_url": "https://rseng.github.io/software/api/repos/github/Michalychforever/CLASS_LVDM"}, {"uid": "github/DRMacIver/shrinkray", "html_url": "https://rseng.github.io/software/repository/github/DRMacIver/shrinkray", "api_url": "https://rseng.github.io/software/api/repos/github/DRMacIver/shrinkray"}, {"uid": "github/cboursnell/crb-blast", "html_url": "https://rseng.github.io/software/repository/github/cboursnell/crb-blast", "api_url": "https://rseng.github.io/software/api/repos/github/cboursnell/crb-blast"}, {"uid": "github/skyfielders/python-skyfield", "html_url": "https://rseng.github.io/software/repository/github/skyfielders/python-skyfield", "api_url": "https://rseng.github.io/software/api/repos/github/skyfielders/python-skyfield"}, {"uid": "github/maho3/ltu-ili", "html_url": "https://rseng.github.io/software/repository/github/maho3/ltu-ili", "api_url": "https://rseng.github.io/software/api/repos/github/maho3/ltu-ili"}, {"uid": "github/Oftatkofta/cellocity", "html_url": "https://rseng.github.io/software/repository/github/Oftatkofta/cellocity", "api_url": "https://rseng.github.io/software/api/repos/github/Oftatkofta/cellocity"}, {"uid": "github/ropensci-org/roblog", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/roblog", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/roblog"}, {"uid": "github/ropensci-org/rotemplate", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/rotemplate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/rotemplate"}, {"uid": "github/ropensci-org/pkgreviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-org/pkgreviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-org/pkgreviewr"}, {"uid": "github/jsobeck/MOOG_SCAT", "html_url": "https://rseng.github.io/software/repository/github/jsobeck/MOOG_SCAT", "api_url": "https://rseng.github.io/software/api/repos/github/jsobeck/MOOG_SCAT"}, {"uid": "github/lnferris/ocean_data_tools", "html_url": "https://rseng.github.io/software/repository/github/lnferris/ocean_data_tools", "api_url": "https://rseng.github.io/software/api/repos/github/lnferris/ocean_data_tools"}, {"uid": "github/nmslib/hnswlib", "html_url": "https://rseng.github.io/software/repository/github/nmslib/hnswlib", "api_url": "https://rseng.github.io/software/api/repos/github/nmslib/hnswlib"}, {"uid": "github/casasglobal-org/psymple", "html_url": "https://rseng.github.io/software/repository/github/casasglobal-org/psymple", "api_url": "https://rseng.github.io/software/api/repos/github/casasglobal-org/psymple"}, {"uid": "github/ropensci/rcol", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcol", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcol"}, {"uid": "github/ropensci/assertr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/assertr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/assertr"}, {"uid": "github/ropensci/ezknitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ezknitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ezknitr"}, {"uid": "github/ropensci/textreuse", "html_url": "https://rseng.github.io/software/repository/github/ropensci/textreuse", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/textreuse"}, {"uid": "github/ropensci/slopes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/slopes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/slopes"}, {"uid": "github/ropensci/prism", "html_url": "https://rseng.github.io/software/repository/github/ropensci/prism", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/prism"}, {"uid": "github/ropensci/tinkr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tinkr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tinkr"}, {"uid": "github/ropensci/pixelclasser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pixelclasser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pixelclasser"}, {"uid": "github/ropensci/rzmq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rzmq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rzmq"}, {"uid": "github/ropensci/binman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/binman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/binman"}, {"uid": "github/ropensci/plater", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plater", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plater"}, {"uid": "github/ropensci/neotoma", "html_url": "https://rseng.github.io/software/repository/github/ropensci/neotoma", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/neotoma"}, {"uid": "github/ropensci/tracerer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tracerer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tracerer"}, {"uid": "github/ropensci/writexl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/writexl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/writexl"}, {"uid": "github/ropensci/pangaear", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pangaear", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pangaear"}, {"uid": "github/ropensci/rcitoid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcitoid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcitoid"}, {"uid": "github/ropensci/taxview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxview"}, {"uid": "github/ropensci/onekp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/onekp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/onekp"}, {"uid": "github/ropensci/antanym", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antanym", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antanym"}, {"uid": "github/ropensci/mapscanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapscanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapscanner"}, {"uid": "github/ropensci/jagstargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jagstargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jagstargets"}, {"uid": "github/ropensci/sofa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/sofa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/sofa"}, {"uid": "github/ropensci/workloopR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/workloopR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/workloopR"}, {"uid": "github/ropensci/rdhs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdhs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdhs"}, {"uid": "github/ropensci/taxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxa"}, {"uid": "github/ropensci/fingertipsR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fingertipsR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fingertipsR"}, {"uid": "github/ropensci/zbank", "html_url": "https://rseng.github.io/software/repository/github/ropensci/zbank", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/zbank"}, {"uid": "github/ropensci/rrricanes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanes"}, {"uid": "github/ropensci/rvertnet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rvertnet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rvertnet"}, {"uid": "github/ropensci/unifir", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unifir", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unifir"}, {"uid": "github/ropensci/grainchanger", "html_url": "https://rseng.github.io/software/repository/github/ropensci/grainchanger", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/grainchanger"}, {"uid": "github/ropensci/gitignore", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gitignore", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gitignore"}, {"uid": "github/ropensci/treestartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treestartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treestartr"}, {"uid": "github/ropensci/RefManageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RefManageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RefManageR"}, {"uid": "github/ropensci/stantargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stantargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stantargets"}, {"uid": "github/ropensci/tabulizer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tabulizer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tabulizer"}, {"uid": "github/ropensci/jqr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jqr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jqr"}, {"uid": "github/ropensci/europepmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/europepmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/europepmc"}, {"uid": "github/ropensci/rnaturalearthdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthdata"}, {"uid": "github/ropensci/bold", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bold", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bold"}, {"uid": "github/ropensci/treedata.table", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treedata.table", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treedata.table"}, {"uid": "github/ropensci/ghql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ghql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ghql"}, {"uid": "github/ropensci/rsvg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsvg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsvg"}, {"uid": "github/ropensci/geonames", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geonames", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geonames"}, {"uid": "github/ropensci/rdataretriever", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdataretriever", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdataretriever"}, {"uid": "github/ropensci/rsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsat"}, {"uid": "github/ropensci/beautier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beautier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beautier"}, {"uid": "github/ropensci/epubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/epubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/epubr"}, {"uid": "github/ropensci/cchecks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cchecks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cchecks"}, {"uid": "github/ropensci/osmapiR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmapiR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmapiR"}, {"uid": "github/ropensci/treebase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/treebase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/treebase"}, {"uid": "github/ropensci/graphql", "html_url": "https://rseng.github.io/software/repository/github/ropensci/graphql", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/graphql"}, {"uid": "github/ropensci/mauricer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mauricer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mauricer"}, {"uid": "github/ropensci/paleobioDB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/paleobioDB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/paleobioDB"}, {"uid": "github/ropensci/addressable", "html_url": "https://rseng.github.io/software/repository/github/ropensci/addressable", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/addressable"}, {"uid": "github/ropensci/targets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/targets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/targets"}, {"uid": "github/ropensci/coder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/coder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/coder"}, {"uid": "github/ropensci/dbparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbparser"}, {"uid": "github/ropensci/taxize", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxize", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxize"}, {"uid": "github/ropensci/rppo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rppo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rppo"}, {"uid": "github/ropensci/microdemic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/microdemic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/microdemic"}, {"uid": "github/ropensci/dbhydroR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dbhydroR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dbhydroR"}, {"uid": "github/ropensci/RNeXML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RNeXML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RNeXML"}, {"uid": "github/ropensci/cld2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld2"}, {"uid": "github/ropensci/rnaturalearth", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearth", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearth"}, {"uid": "github/ropensci/gutenbergr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gutenbergr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gutenbergr"}, {"uid": "github/ropensci/GSODR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/GSODR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/GSODR"}, {"uid": "github/ropensci/tidyhydat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyhydat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyhydat"}, {"uid": "github/ropensci/rcites", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcites", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcites"}, {"uid": "github/ropensci/osmextract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmextract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmextract"}, {"uid": "github/ropensci/geojsonlint", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonlint", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonlint"}, {"uid": "github/ropensci/mctq", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mctq", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mctq"}, {"uid": "github/ropensci/traits", "html_url": "https://rseng.github.io/software/repository/github/ropensci/traits", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/traits"}, {"uid": "github/ropensci/phylogram", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylogram", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylogram"}, {"uid": "github/ropensci/helminthR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/helminthR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/helminthR"}, {"uid": "github/ropensci/tarchetypes", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tarchetypes", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tarchetypes"}, {"uid": "github/ropensci/rplos", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rplos", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rplos"}, {"uid": "github/ropensci/pubchunks", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pubchunks", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pubchunks"}, {"uid": "github/ropensci/smapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/smapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/smapr"}, {"uid": "github/ropensci/weatherOz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weatherOz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weatherOz"}, {"uid": "github/ropensci/katex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/katex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/katex"}, {"uid": "github/ropensci/rorcid", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rorcid", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rorcid"}, {"uid": "github/ropensci/rcoreoa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcoreoa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcoreoa"}, {"uid": "github/ropensci/tidyqpcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidyqpcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidyqpcr"}, {"uid": "github/ropensci/handlr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/handlr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/handlr"}, {"uid": "github/ropensci/bittrex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bittrex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bittrex"}, {"uid": "github/ropensci/webmockr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webmockr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webmockr"}, {"uid": "github/ropensci/oai", "html_url": "https://rseng.github.io/software/repository/github/ropensci/oai", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/oai"}, {"uid": "github/ropensci/brranching", "html_url": "https://rseng.github.io/software/repository/github/ropensci/brranching", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/brranching"}, {"uid": "github/ropensci/gistr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gistr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gistr"}, {"uid": "github/ropensci/bib2df", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bib2df", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bib2df"}, {"uid": "github/ropensci/censo2017", "html_url": "https://rseng.github.io/software/repository/github/ropensci/censo2017", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/censo2017"}, {"uid": "github/ropensci/opencv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencv"}, {"uid": "github/ropensci/getlandsat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getlandsat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getlandsat"}, {"uid": "github/ropensci/ckanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ckanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ckanr"}, {"uid": "github/ropensci/parzer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/parzer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/parzer"}, {"uid": "github/ropensci/jstor", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jstor", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jstor"}, {"uid": "github/ropensci/rinat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rinat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rinat"}, {"uid": "github/ropensci/CoordinateCleaner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/CoordinateCleaner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/CoordinateCleaner"}, {"uid": "github/ropensci/dataspice", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataspice", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataspice"}, {"uid": "github/ropensci/daiquiri", "html_url": "https://rseng.github.io/software/repository/github/ropensci/daiquiri", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/daiquiri"}, {"uid": "github/ropensci/cde", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cde", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cde"}, {"uid": "github/ropensci/robotstxt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/robotstxt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/robotstxt"}, {"uid": "github/ropensci/piggyback", "html_url": "https://rseng.github.io/software/repository/github/ropensci/piggyback", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/piggyback"}, {"uid": "github/ropensci/DoOR.functions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.functions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.functions"}, {"uid": "github/ropensci/terrainr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/terrainr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/terrainr"}, {"uid": "github/ropensci/circle", "html_url": "https://rseng.github.io/software/repository/github/ropensci/circle", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/circle"}, {"uid": "github/ropensci/USAboundaries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundaries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundaries"}, {"uid": "github/ropensci/rperseus", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rperseus", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rperseus"}, {"uid": "github/ropensci/historydata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/historydata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/historydata"}, {"uid": "github/ropensci/rOPTRAM", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rOPTRAM", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rOPTRAM"}, {"uid": "github/ropensci/eia", "html_url": "https://rseng.github.io/software/repository/github/ropensci/eia", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/eia"}, {"uid": "github/ropensci/USAboundariesData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/USAboundariesData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/USAboundariesData"}, {"uid": "github/ropensci/solrium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/solrium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/solrium"}, {"uid": "github/ropensci/outsider.devtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.devtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.devtools"}, {"uid": "github/ropensci/cleanEHR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cleanEHR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cleanEHR"}, {"uid": "github/ropensci/spocc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spocc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spocc"}, {"uid": "github/ropensci/opentripplanner", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opentripplanner", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opentripplanner"}, {"uid": "github/ropensci/MODIStsp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODIStsp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODIStsp"}, {"uid": "github/ropensci/rentrez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rentrez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rentrez"}, {"uid": "github/ropensci/rerddap", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rerddap", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rerddap"}, {"uid": "github/ropensci/rnoaa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnoaa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnoaa"}, {"uid": "github/ropensci/qualtRics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qualtRics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qualtRics"}, {"uid": "github/ropensci/mregions", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mregions", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mregions"}, {"uid": "github/ropensci/UCSCXenaTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/UCSCXenaTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/UCSCXenaTools"}, {"uid": "github/ropensci/stplanr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stplanr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stplanr"}, {"uid": "github/ropensci/beastier", "html_url": "https://rseng.github.io/software/repository/github/ropensci/beastier", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/beastier"}, {"uid": "github/ropensci/bowerbird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bowerbird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bowerbird"}, {"uid": "github/ropensci/MODISTools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MODISTools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MODISTools"}, {"uid": "github/ropensci/rtika", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtika", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtika"}, {"uid": "github/ropensci/datapack", "html_url": "https://rseng.github.io/software/repository/github/ropensci/datapack", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/datapack"}, {"uid": "github/ropensci/outsider.base", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider.base", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider.base"}, {"uid": "github/ropensci/git2rdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2rdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2rdata"}, {"uid": "github/ropensci/Rpolyhedra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rpolyhedra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rpolyhedra"}, {"uid": "github/ropensci/essurvey", "html_url": "https://rseng.github.io/software/repository/github/ropensci/essurvey", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/essurvey"}, {"uid": "github/ropensci/spelling", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spelling", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spelling"}, {"uid": "github/ropensci/jenkins", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jenkins", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jenkins"}, {"uid": "github/ropensci/dataaimsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dataaimsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dataaimsr"}, {"uid": "github/ropensci/tokenizers", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tokenizers", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tokenizers"}, {"uid": "github/ropensci/visdat", "html_url": "https://rseng.github.io/software/repository/github/ropensci/visdat", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/visdat"}, {"uid": "github/ropensci/internetarchive", "html_url": "https://rseng.github.io/software/repository/github/ropensci/internetarchive", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/internetarchive"}, {"uid": "github/ropensci/natserv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/natserv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/natserv"}, {"uid": "github/ropensci/ijtiff", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ijtiff", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ijtiff"}, {"uid": "github/ropensci/opencontext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencontext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencontext"}, {"uid": "github/ropensci/cyphr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cyphr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cyphr"}, {"uid": "github/ropensci/PostcodesioR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/PostcodesioR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/PostcodesioR"}, {"uid": "github/ropensci/opencage", "html_url": "https://rseng.github.io/software/repository/github/ropensci/opencage", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/opencage"}, {"uid": "github/ropensci/hydroscoper", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hydroscoper", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hydroscoper"}, {"uid": "github/ropensci/rgpdd", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgpdd", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgpdd"}, {"uid": "github/ropensci/AntWeb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/AntWeb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/AntWeb"}, {"uid": "github/ropensci/tiler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tiler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tiler"}, {"uid": "github/ropensci/camsRad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/camsRad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/camsRad"}, {"uid": "github/ropensci/ritis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ritis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ritis"}, {"uid": "github/ropensci/rdefra", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdefra", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdefra"}, {"uid": "github/ropensci/rglobi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rglobi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rglobi"}, {"uid": "github/ropensci/wateRinfo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wateRinfo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wateRinfo"}, {"uid": "github/ropensci/EndoMineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EndoMineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EndoMineR"}, {"uid": "github/ropensci/suppdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/suppdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/suppdata"}, {"uid": "github/ropensci/c3dr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c3dr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c3dr"}, {"uid": "github/ropensci/ruODK", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ruODK", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ruODK"}, {"uid": "github/ropensci/allodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/allodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/allodb"}, {"uid": "github/ropensci/chromer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chromer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chromer"}, {"uid": "github/ropensci/pdftools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pdftools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pdftools"}, {"uid": "github/ropensci/codemetar", "html_url": "https://rseng.github.io/software/repository/github/ropensci/codemetar", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/codemetar"}, {"uid": "github/ropensci/gtexr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtexr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtexr"}, {"uid": "github/ropensci/pendulum", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pendulum"}, {"uid": "github/ropensci/tic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tic"}, {"uid": "github/ropensci/osmplotr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmplotr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmplotr"}, {"uid": "github/ropensci/gpg", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gpg", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gpg"}, {"uid": "github/ropensci/rAltmetric", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAltmetric", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAltmetric"}, {"uid": "github/ropensci/mapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mapr"}, {"uid": "github/ropensci/lightr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lightr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lightr"}, {"uid": "github/ropensci/nasapower", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nasapower", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nasapower"}, {"uid": "github/ropensci/getCRUCLdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/getCRUCLdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/getCRUCLdata"}, {"uid": "github/ropensci/cld3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cld3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cld3"}, {"uid": "github/ropensci/spatsoc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spatsoc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spatsoc"}, {"uid": "github/ropensci/phylotaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylotaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylotaR"}, {"uid": "github/ropensci/timefuzz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/timefuzz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/timefuzz"}, {"uid": "github/ropensci/bikedata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bikedata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bikedata"}, {"uid": "github/ropensci/DoOR.data", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DoOR.data", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DoOR.data"}, {"uid": "github/ropensci/jsonld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonld"}, {"uid": "github/ropensci/refimpact", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refimpact", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refimpact"}, {"uid": "github/ropensci/rromeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rromeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rromeo"}, {"uid": "github/ropensci/trufflesniffer", "html_url": "https://rseng.github.io/software/repository/github/ropensci/trufflesniffer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/trufflesniffer"}, {"uid": "github/ropensci/randgeo", "html_url": "https://rseng.github.io/software/repository/github/ropensci/randgeo", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/randgeo"}, {"uid": "github/ropensci/virtuoso", "html_url": "https://rseng.github.io/software/repository/github/ropensci/virtuoso", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/virtuoso"}, {"uid": "github/ropensci/nodbi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nodbi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nodbi"}, {"uid": "github/ropensci/comtradr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/comtradr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/comtradr"}, {"uid": "github/ropensci/SymbiotaR2", "html_url": "https://rseng.github.io/software/repository/github/ropensci/SymbiotaR2", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/SymbiotaR2"}, {"uid": "github/ropensci/gigs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gigs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gigs"}, {"uid": "github/ropensci/ramlegacy", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ramlegacy", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ramlegacy"}, {"uid": "github/ropensci/rfigshare", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfigshare", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfigshare"}, {"uid": "github/ropensci/seasl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/seasl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/seasl"}, {"uid": "github/ropensci/rtweet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rtweet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rtweet"}, {"uid": "github/ropensci/tidync", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidync", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidync"}, {"uid": "github/ropensci/rnpn", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnpn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnpn"}, {"uid": "github/ropensci/rnaturalearthhires", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnaturalearthhires", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnaturalearthhires"}, {"uid": "github/ropensci/fireexposuR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fireexposuR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fireexposuR"}, {"uid": "github/ropensci/rrlite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrlite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrlite"}, {"uid": "github/ropensci/skimr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skimr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skimr"}, {"uid": "github/ropensci/citesdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citesdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citesdb"}, {"uid": "github/ropensci/elastic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/elastic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/elastic"}, {"uid": "github/ropensci/rsnps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rsnps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rsnps"}, {"uid": "github/ropensci/iheatmapr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/iheatmapr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/iheatmapr"}, {"uid": "github/ropensci/rb3", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rb3", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rb3"}, {"uid": "github/ropensci/rebird", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rebird", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rebird"}, {"uid": "github/ropensci/lingtypology", "html_url": "https://rseng.github.io/software/repository/github/ropensci/lingtypology", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/lingtypology"}, {"uid": "github/ropensci/fauxpas", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fauxpas", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fauxpas"}, {"uid": "github/ropensci/rrricanesdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rrricanesdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rrricanesdata"}, {"uid": "github/ropensci/rbhl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbhl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbhl"}, {"uid": "github/ropensci/riem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/riem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/riem"}, {"uid": "github/ropensci/skynet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/skynet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/skynet"}, {"uid": "github/ropensci/worrms", "html_url": "https://rseng.github.io/software/repository/github/ropensci/worrms", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/worrms"}, {"uid": "github/ropensci/refsplitr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/refsplitr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/refsplitr"}, {"uid": "github/ropensci/nbaR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nbaR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nbaR"}, {"uid": "github/ropensci/geojsonio", "html_url": "https://rseng.github.io/software/repository/github/ropensci/geojsonio", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/geojsonio"}, {"uid": "github/ropensci/chlorpromazineR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chlorpromazineR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chlorpromazineR"}, {"uid": "github/ropensci/bibtex", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bibtex", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bibtex"}, {"uid": "github/ropensci/crul", "html_url": "https://rseng.github.io/software/repository/github/ropensci/crul", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/crul"}, {"uid": "github/ropensci/cRegulome", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cRegulome", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cRegulome"}, {"uid": "github/ropensci/rnassqs", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rnassqs", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rnassqs"}, {"uid": "github/ropensci/wellknown", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wellknown", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wellknown"}, {"uid": "github/ropensci/isdparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/isdparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/isdparser"}, {"uid": "github/ropensci/tif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tif"}, {"uid": "github/ropensci/xslt", "html_url": "https://rseng.github.io/software/repository/github/ropensci/xslt", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/xslt"}, {"uid": "github/ropensci/tacmagic", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tacmagic", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tacmagic"}, {"uid": "github/ropensci/gtfsr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gtfsr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gtfsr"}, {"uid": "github/ropensci/NLMR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/NLMR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/NLMR"}, {"uid": "github/ropensci/rdflib", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdflib", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdflib"}, {"uid": "github/ropensci/taxizedb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxizedb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxizedb"}, {"uid": "github/ropensci/rgbif", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgbif", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgbif"}, {"uid": "github/ropensci/phonfieldwork", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phonfieldwork", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phonfieldwork"}, {"uid": "github/ropensci/outsider", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outsider", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outsider"}, {"uid": "github/ropensci/medrxivr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/medrxivr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/medrxivr"}, {"uid": "github/ropensci/FedData", "html_url": "https://rseng.github.io/software/repository/github/ropensci/FedData", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/FedData"}, {"uid": "github/ropensci/colocr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/colocr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/colocr"}, {"uid": "github/ropensci/git2r", "html_url": "https://rseng.github.io/software/repository/github/ropensci/git2r", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/git2r"}, {"uid": "github/ropensci/rfisheries", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfisheries", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfisheries"}, {"uid": "github/ropensci/unrtf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/unrtf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/unrtf"}, {"uid": "github/ropensci/clifro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/clifro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/clifro"}, {"uid": "github/ropensci/photosearcher", "html_url": "https://rseng.github.io/software/repository/github/ropensci/photosearcher", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/photosearcher"}, {"uid": "github/ropensci/tidypmc", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tidypmc", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tidypmc"}, {"uid": "github/ropensci/rAvis", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rAvis", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rAvis"}, {"uid": "github/ropensci/exoplanets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/exoplanets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/exoplanets"}, {"uid": "github/ropensci/excluder", "html_url": "https://rseng.github.io/software/repository/github/ropensci/excluder", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/excluder"}, {"uid": "github/ropensci/ecoengine", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ecoengine", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ecoengine"}, {"uid": "github/ropensci/rgnparser", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rgnparser", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rgnparser"}, {"uid": "github/ropensci/ots", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ots", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ots"}, {"uid": "github/ropensci/rdatacite", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdatacite", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdatacite"}, {"uid": "github/ropensci/restez", "html_url": "https://rseng.github.io/software/repository/github/ropensci/restez", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/restez"}, {"uid": "github/ropensci/namext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/namext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/namext"}, {"uid": "github/ropensci/patentsview", "html_url": "https://rseng.github.io/software/repository/github/ropensci/patentsview", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/patentsview"}, {"uid": "github/ropensci/scrubr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/scrubr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/scrubr"}, {"uid": "github/ropensci/hddtools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hddtools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hddtools"}, {"uid": "github/ropensci/cffr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/cffr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/cffr"}, {"uid": "github/ropensci/citecorp", "html_url": "https://rseng.github.io/software/repository/github/ropensci/citecorp", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/citecorp"}, {"uid": "github/ropensci/rotl", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rotl", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rotl"}, {"uid": "github/ropensci/c14bazAAR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/c14bazAAR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/c14bazAAR"}, {"uid": "github/ropensci/antiword", "html_url": "https://rseng.github.io/software/repository/github/ropensci/antiword", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/antiword"}, {"uid": "github/ropensci/fulltext", "html_url": "https://rseng.github.io/software/repository/github/ropensci/fulltext", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/fulltext"}, {"uid": "github/ropensci/predictNMB", "html_url": "https://rseng.github.io/software/repository/github/ropensci/predictNMB", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/predictNMB"}, {"uid": "github/ropensci/conditionz", "html_url": "https://rseng.github.io/software/repository/github/ropensci/conditionz", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/conditionz"}, {"uid": "github/ropensci/tesseract", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tesseract", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tesseract"}, {"uid": "github/ropensci/qpdf", "html_url": "https://rseng.github.io/software/repository/github/ropensci/qpdf", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/qpdf"}, {"uid": "github/ropensci/charlatan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/charlatan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/charlatan"}, {"uid": "github/ropensci/weathercan", "html_url": "https://rseng.github.io/software/repository/github/ropensci/weathercan", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/weathercan"}, {"uid": "github/ropensci/EML", "html_url": "https://rseng.github.io/software/repository/github/ropensci/EML", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/EML"}, {"uid": "github/ropensci/finch", "html_url": "https://rseng.github.io/software/repository/github/ropensci/finch", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/finch"}, {"uid": "github/ropensci/jsonvalidate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/jsonvalidate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/jsonvalidate"}, {"uid": "github/ropensci/ssh", "html_url": "https://rseng.github.io/software/repository/github/ropensci/ssh", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/ssh"}, {"uid": "github/ropensci/RSelenium", "html_url": "https://rseng.github.io/software/repository/github/ropensci/RSelenium", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/RSelenium"}, {"uid": "github/ropensci/wikitaxa", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wikitaxa", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wikitaxa"}, {"uid": "github/ropensci/osmdata", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osmdata", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osmdata"}, {"uid": "github/ropensci/wdman", "html_url": "https://rseng.github.io/software/repository/github/ropensci/wdman", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/wdman"}, {"uid": "github/ropensci/MtreeRing", "html_url": "https://rseng.github.io/software/repository/github/ropensci/MtreeRing", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/MtreeRing"}, {"uid": "github/ropensci/googleLanguageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/googleLanguageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/googleLanguageR"}, {"uid": "github/ropensci/bomrang", "html_url": "https://rseng.github.io/software/repository/github/ropensci/bomrang", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/bomrang"}, {"uid": "github/ropensci/rmangal", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rmangal", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rmangal"}, {"uid": "github/ropensci/chirps", "html_url": "https://rseng.github.io/software/repository/github/ropensci/chirps", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/chirps"}, {"uid": "github/ropensci/plotly", "html_url": "https://rseng.github.io/software/repository/github/ropensci/plotly", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/plotly"}, {"uid": "github/ropensci/staypuft", "html_url": "https://rseng.github.io/software/repository/github/ropensci/staypuft", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/staypuft"}, {"uid": "github/ropensci/stats19", "html_url": "https://rseng.github.io/software/repository/github/ropensci/stats19", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/stats19"}, {"uid": "github/ropensci/BaseSet", "html_url": "https://rseng.github.io/software/repository/github/ropensci/BaseSet", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/BaseSet"}, {"uid": "github/ropensci/taxadb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxadb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxadb"}, {"uid": "github/ropensci/infx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/infx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/infx"}, {"uid": "github/ropensci/rfishbase", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfishbase", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfishbase"}, {"uid": "github/ropensci/biomartr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/biomartr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/biomartr"}, {"uid": "github/ropensci/mcbette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/mcbette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/mcbette"}, {"uid": "github/ropensci/babette", "html_url": "https://rseng.github.io/software/repository/github/ropensci/babette", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/babette"}, {"uid": "github/ropensci/rdryad", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rdryad", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rdryad"}, {"uid": "github/ropensci/arkdb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/arkdb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/arkdb"}, {"uid": "github/ropensci/nlrx", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nlrx", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nlrx"}, {"uid": "github/ropensci/roadoi", "html_url": "https://rseng.github.io/software/repository/github/ropensci/roadoi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/roadoi"}, {"uid": "github/ropensci/av", "html_url": "https://rseng.github.io/software/repository/github/ropensci/av", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/av"}, {"uid": "github/ropensci/rusda", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rusda", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rusda"}, {"uid": "github/ropensci/gittargets", "html_url": "https://rseng.github.io/software/repository/github/ropensci/gittargets", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/gittargets"}, {"uid": "github/ropensci/awardFindR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/awardFindR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/awardFindR"}, {"uid": "github/ropensci/rcrossref", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rcrossref", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rcrossref"}, {"uid": "github/ropensci/Rclean", "html_url": "https://rseng.github.io/software/repository/github/ropensci/Rclean", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/Rclean"}, {"uid": "github/ropensci/pathviewr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/pathviewr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/pathviewr"}, {"uid": "github/ropensci/drake", "html_url": "https://rseng.github.io/software/repository/github/ropensci/drake", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/drake"}, {"uid": "github/ropensci/DataSpaceR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataSpaceR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataSpaceR"}, {"uid": "github/ropensci/baRcodeR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/baRcodeR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/baRcodeR"}, {"uid": "github/ropensci/phylocomr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/phylocomr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/phylocomr"}, {"uid": "github/ropensci/spiro", "html_url": "https://rseng.github.io/software/repository/github/ropensci/spiro", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/spiro"}, {"uid": "github/ropensci/popler", "html_url": "https://rseng.github.io/software/repository/github/ropensci/popler", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/popler"}, {"uid": "github/ropensci/webchem", "html_url": "https://rseng.github.io/software/repository/github/ropensci/webchem", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/webchem"}, {"uid": "github/ropensci/outcomerate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/outcomerate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/outcomerate"}, {"uid": "github/ropensci/emld", "html_url": "https://rseng.github.io/software/repository/github/ropensci/emld", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/emld"}, {"uid": "github/ropensci/osfr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/osfr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/osfr"}, {"uid": "github/ropensci/rWBclimate", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rWBclimate", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rWBclimate"}, {"uid": "github/ropensci/rredlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rredlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rredlist"}, {"uid": "github/ropensci/readODS", "html_url": "https://rseng.github.io/software/repository/github/ropensci/readODS", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/readODS"}, {"uid": "github/ropensci/rbace", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rbace", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rbace"}, {"uid": "github/ropensci/hoardr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hoardr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hoardr"}, {"uid": "github/ropensci/dittodb", "html_url": "https://rseng.github.io/software/repository/github/ropensci/dittodb", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/dittodb"}, {"uid": "github/ropensci/landscapetools", "html_url": "https://rseng.github.io/software/repository/github/ropensci/landscapetools", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/landscapetools"}, {"uid": "github/ropensci/aRxiv", "html_url": "https://rseng.github.io/software/repository/github/ropensci/aRxiv", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/aRxiv"}, {"uid": "github/ropensci/vcr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/vcr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/vcr"}, {"uid": "github/ropensci/hunspell", "html_url": "https://rseng.github.io/software/repository/github/ropensci/hunspell", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/hunspell"}, {"uid": "github/ropensci/rfema", "html_url": "https://rseng.github.io/software/repository/github/ropensci/rfema", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/rfema"}, {"uid": "github/ropensci/taxlist", "html_url": "https://rseng.github.io/software/repository/github/ropensci/taxlist", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/taxlist"}, {"uid": "github/ropensci/nomisr", "html_url": "https://rseng.github.io/software/repository/github/ropensci/nomisr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/nomisr"}, {"uid": "github/ropensci/tradestatistics", "html_url": "https://rseng.github.io/software/repository/github/ropensci/tradestatistics", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/tradestatistics"}, {"uid": "github/ropensci/magick", "html_url": "https://rseng.github.io/software/repository/github/ropensci/magick", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/magick"}, {"uid": "github/ropensci/DataPackageR", "html_url": "https://rseng.github.io/software/repository/github/ropensci/DataPackageR", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci/DataPackageR"}, {"uid": "github/q1cui/discourseGT", "html_url": "https://rseng.github.io/software/repository/github/q1cui/discourseGT", "api_url": "https://rseng.github.io/software/api/repos/github/q1cui/discourseGT"}, {"uid": "github/jydu/maffilter", "html_url": "https://rseng.github.io/software/repository/github/jydu/maffilter", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/maffilter"}, {"uid": "github/jydu/physamp", "html_url": "https://rseng.github.io/software/repository/github/jydu/physamp", "api_url": "https://rseng.github.io/software/api/repos/github/jydu/physamp"}, {"uid": "github/bommert/stabm", "html_url": "https://rseng.github.io/software/repository/github/bommert/stabm", "api_url": "https://rseng.github.io/software/api/repos/github/bommert/stabm"}, {"uid": "github/vosjo/speedyfit", "html_url": "https://rseng.github.io/software/repository/github/vosjo/speedyfit", "api_url": "https://rseng.github.io/software/api/repos/github/vosjo/speedyfit"}, {"uid": "github/UtrechtUniversity/raster_extraction", "html_url": "https://rseng.github.io/software/repository/github/UtrechtUniversity/raster_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/UtrechtUniversity/raster_extraction"}, {"uid": "github/danmoser/pyhdust", "html_url": "https://rseng.github.io/software/repository/github/danmoser/pyhdust", "api_url": "https://rseng.github.io/software/api/repos/github/danmoser/pyhdust"}, {"uid": "github/AllenInstitute/bmtk", "html_url": "https://rseng.github.io/software/repository/github/AllenInstitute/bmtk", "api_url": "https://rseng.github.io/software/api/repos/github/AllenInstitute/bmtk"}, {"uid": "github/dzerbino/velvet", "html_url": "https://rseng.github.io/software/repository/github/dzerbino/velvet", "api_url": "https://rseng.github.io/software/api/repos/github/dzerbino/velvet"}, {"uid": "github/willvousden/ptemcee", "html_url": "https://rseng.github.io/software/repository/github/willvousden/ptemcee", "api_url": "https://rseng.github.io/software/api/repos/github/willvousden/ptemcee"}, {"uid": "github/chfeder/turbulence_generator", "html_url": "https://rseng.github.io/software/repository/github/chfeder/turbulence_generator", "api_url": "https://rseng.github.io/software/api/repos/github/chfeder/turbulence_generator"}, {"uid": "github/candYgene/abg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/abg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/abg-ld"}, {"uid": "github/candYgene/pbg-ld", "html_url": "https://rseng.github.io/software/repository/github/candYgene/pbg-ld", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/pbg-ld"}, {"uid": "github/candYgene/QTM", "html_url": "https://rseng.github.io/software/repository/github/candYgene/QTM", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/QTM"}, {"uid": "github/candYgene/siga", "html_url": "https://rseng.github.io/software/repository/github/candYgene/siga", "api_url": "https://rseng.github.io/software/api/repos/github/candYgene/siga"}, {"uid": "github/UgoLomoio/gtex_visualizer", "html_url": "https://rseng.github.io/software/repository/github/UgoLomoio/gtex_visualizer", "api_url": "https://rseng.github.io/software/api/repos/github/UgoLomoio/gtex_visualizer"}, {"uid": "github/quantum-exeter/SpiDy.jl", "html_url": "https://rseng.github.io/software/repository/github/quantum-exeter/SpiDy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/quantum-exeter/SpiDy.jl"}, {"uid": "github/wen-jams/bsavi", "html_url": "https://rseng.github.io/software/repository/github/wen-jams/bsavi", "api_url": "https://rseng.github.io/software/api/repos/github/wen-jams/bsavi"}, {"uid": "github/chadagreene/Tide-Model-Driver", "html_url": "https://rseng.github.io/software/repository/github/chadagreene/Tide-Model-Driver", "api_url": "https://rseng.github.io/software/api/repos/github/chadagreene/Tide-Model-Driver"}, {"uid": "github/deezer/spleeter", "html_url": "https://rseng.github.io/software/repository/github/deezer/spleeter", "api_url": "https://rseng.github.io/software/api/repos/github/deezer/spleeter"}, {"uid": "github/SMI/SmiServices", "html_url": "https://rseng.github.io/software/repository/github/SMI/SmiServices", "api_url": "https://rseng.github.io/software/api/repos/github/SMI/SmiServices"}, {"uid": "github/skschum/MFAssignR", "html_url": "https://rseng.github.io/software/repository/github/skschum/MFAssignR", "api_url": "https://rseng.github.io/software/api/repos/github/skschum/MFAssignR"}, {"uid": "github/bregaldo/pywst", "html_url": "https://rseng.github.io/software/repository/github/bregaldo/pywst", "api_url": "https://rseng.github.io/software/api/repos/github/bregaldo/pywst"}, {"uid": "github/johnschwenck/bp", "html_url": "https://rseng.github.io/software/repository/github/johnschwenck/bp", "api_url": "https://rseng.github.io/software/api/repos/github/johnschwenck/bp"}, {"uid": "github/Yunzheng168/PANCAKE", "html_url": "https://rseng.github.io/software/repository/github/Yunzheng168/PANCAKE", "api_url": "https://rseng.github.io/software/api/repos/github/Yunzheng168/PANCAKE"}, {"uid": "github/freebayes/freebayes", "html_url": "https://rseng.github.io/software/repository/github/freebayes/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/freebayes/freebayes"}, {"uid": "github/darioizzo/dcgp", "html_url": "https://rseng.github.io/software/repository/github/darioizzo/dcgp", "api_url": "https://rseng.github.io/software/api/repos/github/darioizzo/dcgp"}, {"uid": "github/ITA-Solar/rh", "html_url": "https://rseng.github.io/software/repository/github/ITA-Solar/rh", "api_url": "https://rseng.github.io/software/api/repos/github/ITA-Solar/rh"}, {"uid": "github/hz1010/FIPRESCI_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/hz1010/FIPRESCI_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/hz1010/FIPRESCI_data_analysis"}, {"uid": "github/Huang-CL/Magrathea", "html_url": "https://rseng.github.io/software/repository/github/Huang-CL/Magrathea", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-CL/Magrathea"}, {"uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefmath/SurfaceWaterIntegratedModeling.jl"}, {"uid": "github/MikkelSchubert/adapterremoval", "html_url": "https://rseng.github.io/software/repository/github/MikkelSchubert/adapterremoval", "api_url": "https://rseng.github.io/software/api/repos/github/MikkelSchubert/adapterremoval"}, {"uid": "github/rmaphoh/AutoMorph", "html_url": "https://rseng.github.io/software/repository/github/rmaphoh/AutoMorph", "api_url": "https://rseng.github.io/software/api/repos/github/rmaphoh/AutoMorph"}, {"uid": "github/jeaadams/ExoPix", "html_url": "https://rseng.github.io/software/repository/github/jeaadams/ExoPix", "api_url": "https://rseng.github.io/software/api/repos/github/jeaadams/ExoPix"}, {"uid": "github/gvilitechltd/LibSWIFFT", "html_url": "https://rseng.github.io/software/repository/github/gvilitechltd/LibSWIFFT", "api_url": "https://rseng.github.io/software/api/repos/github/gvilitechltd/LibSWIFFT"}, {"uid": "github/kerkelae/disimpy", "html_url": "https://rseng.github.io/software/repository/github/kerkelae/disimpy", "api_url": "https://rseng.github.io/software/api/repos/github/kerkelae/disimpy"}, {"uid": "github/JEFworks-Lab/STdeconvolve", "html_url": "https://rseng.github.io/software/repository/github/JEFworks-Lab/STdeconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/JEFworks-Lab/STdeconvolve"}, {"uid": "github/alexander-pastukhov/bistablehistory", "html_url": "https://rseng.github.io/software/repository/github/alexander-pastukhov/bistablehistory", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-pastukhov/bistablehistory"}, {"uid": "github/libgamera/GAMERA", "html_url": "https://rseng.github.io/software/repository/github/libgamera/GAMERA", "api_url": "https://rseng.github.io/software/api/repos/github/libgamera/GAMERA"}, {"uid": "github/tvwenger/bayes_spec", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/bayes_spec", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/bayes_spec"}, {"uid": "github/tvwenger/millennium-tap-query", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/millennium-tap-query", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/millennium-tap-query"}, {"uid": "github/tvwenger/tmbidl", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/tmbidl", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/tmbidl"}, {"uid": "github/tvwenger/HII-Region-Models", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/HII-Region-Models", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/HII-Region-Models"}, {"uid": "github/tvwenger/wisp", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/wisp", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/wisp"}, {"uid": "github/tvwenger/kinematic_scaleheight", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kinematic_scaleheight", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kinematic_scaleheight"}, {"uid": "github/tvwenger/kd", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/kd", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/kd"}, {"uid": "github/tvwenger/hii-region-kinematics", "html_url": "https://rseng.github.io/software/repository/github/tvwenger/hii-region-kinematics", "api_url": "https://rseng.github.io/software/api/repos/github/tvwenger/hii-region-kinematics"}, {"uid": "github/jkrogager/VoigtFit", "html_url": "https://rseng.github.io/software/repository/github/jkrogager/VoigtFit", "api_url": "https://rseng.github.io/software/api/repos/github/jkrogager/VoigtFit"}, {"uid": "github/WilsonGregory/ginjax", "html_url": "https://rseng.github.io/software/repository/github/WilsonGregory/ginjax", "api_url": "https://rseng.github.io/software/api/repos/github/WilsonGregory/ginjax"}, {"uid": "github/oliveirara/polyMV", "html_url": "https://rseng.github.io/software/repository/github/oliveirara/polyMV", "api_url": "https://rseng.github.io/software/api/repos/github/oliveirara/polyMV"}, {"uid": "github/BMCV/giatools", "html_url": "https://rseng.github.io/software/repository/github/BMCV/giatools", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/giatools"}, {"uid": "github/BMCV/galaxy-image-analysis", "html_url": "https://rseng.github.io/software/repository/github/BMCV/galaxy-image-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/BMCV/galaxy-image-analysis"}, {"uid": "github/filipezabala/voice", "html_url": "https://rseng.github.io/software/repository/github/filipezabala/voice", "api_url": "https://rseng.github.io/software/api/repos/github/filipezabala/voice"}, {"uid": "github/SandyYuan/GRAND-HOD", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/GRAND-HOD", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/GRAND-HOD"}, {"uid": "github/SandyYuan/s3PCF", "html_url": "https://rseng.github.io/software/repository/github/SandyYuan/s3PCF", "api_url": "https://rseng.github.io/software/api/repos/github/SandyYuan/s3PCF"}, {"uid": "github/4DModeller/fdmr", "html_url": "https://rseng.github.io/software/repository/github/4DModeller/fdmr", "api_url": "https://rseng.github.io/software/api/repos/github/4DModeller/fdmr"}, {"uid": "github/dblaschke-LANL/PyDislocDyn", "html_url": "https://rseng.github.io/software/repository/github/dblaschke-LANL/PyDislocDyn", "api_url": "https://rseng.github.io/software/api/repos/github/dblaschke-LANL/PyDislocDyn"}, {"uid": "github/el2718/FastQSL", "html_url": "https://rseng.github.io/software/repository/github/el2718/FastQSL", "api_url": "https://rseng.github.io/software/api/repos/github/el2718/FastQSL"}, {"uid": "github/fccoelho/epigrass", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epigrass", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epigrass"}, {"uid": "github/fccoelho/epimodels", "html_url": "https://rseng.github.io/software/repository/github/fccoelho/epimodels", "api_url": "https://rseng.github.io/software/api/repos/github/fccoelho/epimodels"}, {"uid": "github/SpectraCollab/ORMIR_XCT", "html_url": "https://rseng.github.io/software/repository/github/SpectraCollab/ORMIR_XCT", "api_url": "https://rseng.github.io/software/api/repos/github/SpectraCollab/ORMIR_XCT"}, {"uid": "github/CalumHawcroft/Starburst", "html_url": "https://rseng.github.io/software/repository/github/CalumHawcroft/Starburst", "api_url": "https://rseng.github.io/software/api/repos/github/CalumHawcroft/Starburst"}, {"uid": "github/vle-prtc/rbef-prtc", "html_url": "https://rseng.github.io/software/repository/github/vle-prtc/rbef-prtc", "api_url": "https://rseng.github.io/software/api/repos/github/vle-prtc/rbef-prtc"}, {"uid": "github/PaulMcMillan-Astro/Torus", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/Torus", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/Torus"}, {"uid": "github/PaulMcMillan-Astro/GalPot", "html_url": "https://rseng.github.io/software/repository/github/PaulMcMillan-Astro/GalPot", "api_url": "https://rseng.github.io/software/api/repos/github/PaulMcMillan-Astro/GalPot"}, {"uid": "github/indraniel/fqgrep", "html_url": "https://rseng.github.io/software/repository/github/indraniel/fqgrep", "api_url": "https://rseng.github.io/software/api/repos/github/indraniel/fqgrep"}, {"uid": "github/morpheus-project/morpheus", "html_url": "https://rseng.github.io/software/repository/github/morpheus-project/morpheus", "api_url": "https://rseng.github.io/software/api/repos/github/morpheus-project/morpheus"}, {"uid": "github/johnveitch/cpnest", "html_url": "https://rseng.github.io/software/repository/github/johnveitch/cpnest", "api_url": "https://rseng.github.io/software/api/repos/github/johnveitch/cpnest"}, {"uid": "github/davi-rodrigues/CCBH-Numerics", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/CCBH-Numerics", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/CCBH-Numerics"}, {"uid": "github/davi-rodrigues/NAVanalysis", "html_url": "https://rseng.github.io/software/repository/github/davi-rodrigues/NAVanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/davi-rodrigues/NAVanalysis"}, {"uid": "github/argiopetech/base", "html_url": "https://rseng.github.io/software/repository/github/argiopetech/base", "api_url": "https://rseng.github.io/software/api/repos/github/argiopetech/base"}, {"uid": "github/TeamNCMC/cuisto", "html_url": "https://rseng.github.io/software/repository/github/TeamNCMC/cuisto", "api_url": "https://rseng.github.io/software/api/repos/github/TeamNCMC/cuisto"}, {"uid": "github/csalyk/spectools_ir", "html_url": "https://rseng.github.io/software/repository/github/csalyk/spectools_ir", "api_url": "https://rseng.github.io/software/api/repos/github/csalyk/spectools_ir"}, {"uid": "github/hendr1km/dropout", "html_url": "https://rseng.github.io/software/repository/github/hendr1km/dropout", "api_url": "https://rseng.github.io/software/api/repos/github/hendr1km/dropout"}, {"uid": "github/LalResearchGroup/CNV-clinviewer", "html_url": "https://rseng.github.io/software/repository/github/LalResearchGroup/CNV-clinviewer", "api_url": "https://rseng.github.io/software/api/repos/github/LalResearchGroup/CNV-clinviewer"}, {"uid": "github/mary77/scQcut", "html_url": "https://rseng.github.io/software/repository/github/mary77/scQcut", "api_url": "https://rseng.github.io/software/api/repos/github/mary77/scQcut"}, {"uid": "github/michalc/OpenTTDLab", "html_url": "https://rseng.github.io/software/repository/github/michalc/OpenTTDLab", "api_url": "https://rseng.github.io/software/api/repos/github/michalc/OpenTTDLab"}, {"uid": "github/SihaoCheng/WD_models", "html_url": "https://rseng.github.io/software/repository/github/SihaoCheng/WD_models", "api_url": "https://rseng.github.io/software/api/repos/github/SihaoCheng/WD_models"}, {"uid": "github/jaimedelacruz/stic", "html_url": "https://rseng.github.io/software/repository/github/jaimedelacruz/stic", "api_url": "https://rseng.github.io/software/api/repos/github/jaimedelacruz/stic"}, {"uid": "github/ethankruse/koi3278", "html_url": "https://rseng.github.io/software/repository/github/ethankruse/koi3278", "api_url": "https://rseng.github.io/software/api/repos/github/ethankruse/koi3278"}, {"uid": "github/ec-jrc/nrt", "html_url": "https://rseng.github.io/software/repository/github/ec-jrc/nrt", "api_url": "https://rseng.github.io/software/api/repos/github/ec-jrc/nrt"}, {"uid": "github/grburgess/polarpy", "html_url": "https://rseng.github.io/software/repository/github/grburgess/polarpy", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/polarpy"}, {"uid": "github/grburgess/popsynth", "html_url": "https://rseng.github.io/software/repository/github/grburgess/popsynth", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/popsynth"}, {"uid": "github/grburgess/pynchrotron", "html_url": "https://rseng.github.io/software/repository/github/grburgess/pynchrotron", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/pynchrotron"}, {"uid": "github/grburgess/nazgul", "html_url": "https://rseng.github.io/software/repository/github/grburgess/nazgul", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/nazgul"}, {"uid": "github/grburgess/ronswanson", "html_url": "https://rseng.github.io/software/repository/github/grburgess/ronswanson", "api_url": "https://rseng.github.io/software/api/repos/github/grburgess/ronswanson"}, {"uid": "github/RajLabMSSM/echolocatoR", "html_url": "https://rseng.github.io/software/repository/github/RajLabMSSM/echolocatoR", "api_url": "https://rseng.github.io/software/api/repos/github/RajLabMSSM/echolocatoR"}, {"uid": "github/patrickfuchs/buildH", "html_url": "https://rseng.github.io/software/repository/github/patrickfuchs/buildH", "api_url": "https://rseng.github.io/software/api/repos/github/patrickfuchs/buildH"}, {"uid": "github/josegcpa/nnunet_serve", "html_url": "https://rseng.github.io/software/repository/github/josegcpa/nnunet_serve", "api_url": "https://rseng.github.io/software/api/repos/github/josegcpa/nnunet_serve"}, {"uid": "github/uw-ipd/RoseTTAFold2", "html_url": "https://rseng.github.io/software/repository/github/uw-ipd/RoseTTAFold2", "api_url": "https://rseng.github.io/software/api/repos/github/uw-ipd/RoseTTAFold2"}, {"uid": "github/linksmart/thing-directory", "html_url": "https://rseng.github.io/software/repository/github/linksmart/thing-directory", "api_url": "https://rseng.github.io/software/api/repos/github/linksmart/thing-directory"}, {"uid": "github/ezer/PAFway", "html_url": "https://rseng.github.io/software/repository/github/ezer/PAFway", "api_url": "https://rseng.github.io/software/api/repos/github/ezer/PAFway"}, {"uid": "github/flemingtonlab/SpliceV", "html_url": "https://rseng.github.io/software/repository/github/flemingtonlab/SpliceV", "api_url": "https://rseng.github.io/software/api/repos/github/flemingtonlab/SpliceV"}, {"uid": "github/jgoodeve/streaktools", "html_url": "https://rseng.github.io/software/repository/github/jgoodeve/streaktools", "api_url": "https://rseng.github.io/software/api/repos/github/jgoodeve/streaktools"}, {"uid": "github/wustat/rjaf", "html_url": "https://rseng.github.io/software/repository/github/wustat/rjaf", "api_url": "https://rseng.github.io/software/api/repos/github/wustat/rjaf"}, {"uid": "github/HoBeZwe/SphericalScattering.jl", "html_url": "https://rseng.github.io/software/repository/github/HoBeZwe/SphericalScattering.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HoBeZwe/SphericalScattering.jl"}, {"uid": "github/tBilby/tBilby", "html_url": "https://rseng.github.io/software/repository/github/tBilby/tBilby", "api_url": "https://rseng.github.io/software/api/repos/github/tBilby/tBilby"}, {"uid": "github/micbia/SubgridClumping", "html_url": "https://rseng.github.io/software/repository/github/micbia/SubgridClumping", "api_url": "https://rseng.github.io/software/api/repos/github/micbia/SubgridClumping"}, {"uid": "github/wuzhenao/CPPLS-MLP", "html_url": "https://rseng.github.io/software/repository/github/wuzhenao/CPPLS-MLP", "api_url": "https://rseng.github.io/software/api/repos/github/wuzhenao/CPPLS-MLP"}, {"uid": "github/Huang-lab/BEACON", "html_url": "https://rseng.github.io/software/repository/github/Huang-lab/BEACON", "api_url": "https://rseng.github.io/software/api/repos/github/Huang-lab/BEACON"}, {"uid": "github/margudo/LSSGALPY", "html_url": "https://rseng.github.io/software/repository/github/margudo/LSSGALPY", "api_url": "https://rseng.github.io/software/api/repos/github/margudo/LSSGALPY"}, {"uid": "github/evolbioinfo/bdei", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdei", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdei"}, {"uid": "github/evolbioinfo/treesimulator", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/treesimulator", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/treesimulator"}, {"uid": "github/evolbioinfo/bdpn", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdpn", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdpn"}, {"uid": "github/evolbioinfo/bdct", "html_url": "https://rseng.github.io/software/repository/github/evolbioinfo/bdct", "api_url": "https://rseng.github.io/software/api/repos/github/evolbioinfo/bdct"}, {"uid": "github/inonchiu/ComEst", "html_url": "https://rseng.github.io/software/repository/github/inonchiu/ComEst", "api_url": "https://rseng.github.io/software/api/repos/github/inonchiu/ComEst"}, {"uid": "github/sparks-baird/xtal2png", "html_url": "https://rseng.github.io/software/repository/github/sparks-baird/xtal2png", "api_url": "https://rseng.github.io/software/api/repos/github/sparks-baird/xtal2png"}, {"uid": "github/maxmahlke/ssos", "html_url": "https://rseng.github.io/software/repository/github/maxmahlke/ssos", "api_url": "https://rseng.github.io/software/api/repos/github/maxmahlke/ssos"}, {"uid": "github/WorkflowConversion/CTDConverter", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDConverter", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDConverter"}, {"uid": "github/WorkflowConversion/CTDopts", "html_url": "https://rseng.github.io/software/repository/github/WorkflowConversion/CTDopts", "api_url": "https://rseng.github.io/software/api/repos/github/WorkflowConversion/CTDopts"}, {"uid": "github/jw-lin/cbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/cbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/cbeam"}, {"uid": "github/jw-lin/lightbeam", "html_url": "https://rseng.github.io/software/repository/github/jw-lin/lightbeam", "api_url": "https://rseng.github.io/software/api/repos/github/jw-lin/lightbeam"}, {"uid": "github/pw31/GGchem", "html_url": "https://rseng.github.io/software/repository/github/pw31/GGchem", "api_url": "https://rseng.github.io/software/api/repos/github/pw31/GGchem"}, {"uid": "github/mwvgroup/pwv_kpno", "html_url": "https://rseng.github.io/software/repository/github/mwvgroup/pwv_kpno", "api_url": "https://rseng.github.io/software/api/repos/github/mwvgroup/pwv_kpno"}, {"uid": "github/mikessh/vdjtools", "html_url": "https://rseng.github.io/software/repository/github/mikessh/vdjtools", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/vdjtools"}, {"uid": "github/mikessh/oncofuse", "html_url": "https://rseng.github.io/software/repository/github/mikessh/oncofuse", "api_url": "https://rseng.github.io/software/api/repos/github/mikessh/oncofuse"}, {"uid": "github/euclidlib/euclidlib", "html_url": "https://rseng.github.io/software/repository/github/euclidlib/euclidlib", "api_url": "https://rseng.github.io/software/api/repos/github/euclidlib/euclidlib"}, {"uid": "github/pypeit/PypeIt", "html_url": "https://rseng.github.io/software/repository/github/pypeit/PypeIt", "api_url": "https://rseng.github.io/software/api/repos/github/pypeit/PypeIt"}, {"uid": "github/metagenlab/assembly_finder", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/assembly_finder", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/assembly_finder"}, {"uid": "github/metagenlab/MeSS", "html_url": "https://rseng.github.io/software/repository/github/metagenlab/MeSS", "api_url": "https://rseng.github.io/software/api/repos/github/metagenlab/MeSS"}, {"uid": "github/VILLASframework/node", "html_url": "https://rseng.github.io/software/repository/github/VILLASframework/node", "api_url": "https://rseng.github.io/software/api/repos/github/VILLASframework/node"}, {"uid": "github/icecube/FIRESONG", "html_url": "https://rseng.github.io/software/repository/github/icecube/FIRESONG", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/FIRESONG"}, {"uid": "github/icecube/TauRunner", "html_url": "https://rseng.github.io/software/repository/github/icecube/TauRunner", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/TauRunner"}, {"uid": "github/icecube/toise", "html_url": "https://rseng.github.io/software/repository/github/icecube/toise", "api_url": "https://rseng.github.io/software/api/repos/github/icecube/toise"}, {"uid": "github/dh4gan/oberon", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/oberon", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/oberon"}, {"uid": "github/dh4gan/taktent", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/taktent", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/taktent"}, {"uid": "github/dh4gan/tache", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/tache", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/tache"}, {"uid": "github/dh4gan/grapus", "html_url": "https://rseng.github.io/software/repository/github/dh4gan/grapus", "api_url": "https://rseng.github.io/software/api/repos/github/dh4gan/grapus"}, {"uid": "github/kgullikson88/Companion-Finder", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Companion-Finder", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Companion-Finder"}, {"uid": "github/kgullikson88/Telluric-Fitter", "html_url": "https://rseng.github.io/software/repository/github/kgullikson88/Telluric-Fitter", "api_url": "https://rseng.github.io/software/api/repos/github/kgullikson88/Telluric-Fitter"}, {"uid": "github/jamescasbon/PyVCF", "html_url": "https://rseng.github.io/software/repository/github/jamescasbon/PyVCF", "api_url": "https://rseng.github.io/software/api/repos/github/jamescasbon/PyVCF"}, {"uid": "github/jdber1/opendrop", "html_url": "https://rseng.github.io/software/repository/github/jdber1/opendrop", "api_url": "https://rseng.github.io/software/api/repos/github/jdber1/opendrop"}, {"uid": "github/HinLeung622/pipes_vis", "html_url": "https://rseng.github.io/software/repository/github/HinLeung622/pipes_vis", "api_url": "https://rseng.github.io/software/api/repos/github/HinLeung622/pipes_vis"}, {"uid": "github/fabiopardo/qmap", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/qmap", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/qmap"}, {"uid": "github/fabiopardo/tonic", "html_url": "https://rseng.github.io/software/repository/github/fabiopardo/tonic", "api_url": "https://rseng.github.io/software/api/repos/github/fabiopardo/tonic"}, {"uid": "github/Qile0317/APackOfTheClones", "html_url": "https://rseng.github.io/software/repository/github/Qile0317/APackOfTheClones", "api_url": "https://rseng.github.io/software/api/repos/github/Qile0317/APackOfTheClones"}, {"uid": "github/sebhoof/SolarAxionFlux", "html_url": "https://rseng.github.io/software/repository/github/sebhoof/SolarAxionFlux", "api_url": "https://rseng.github.io/software/api/repos/github/sebhoof/SolarAxionFlux"}, {"uid": "github/csb-toolbox/CSB", "html_url": "https://rseng.github.io/software/repository/github/csb-toolbox/CSB", "api_url": "https://rseng.github.io/software/api/repos/github/csb-toolbox/CSB"}, {"uid": "github/ArenA-Crowds/Crowds", "html_url": "https://rseng.github.io/software/repository/github/ArenA-Crowds/Crowds", "api_url": "https://rseng.github.io/software/api/repos/github/ArenA-Crowds/Crowds"}, {"uid": "github/stedolan/jq", "html_url": "https://rseng.github.io/software/repository/github/stedolan/jq", "api_url": "https://rseng.github.io/software/api/repos/github/stedolan/jq"}, {"uid": "github/fermo-metabolomics/fermo_core", "html_url": "https://rseng.github.io/software/repository/github/fermo-metabolomics/fermo_core", "api_url": "https://rseng.github.io/software/api/repos/github/fermo-metabolomics/fermo_core"}, {"uid": "github/wangchao-malab/DeepAc4C", "html_url": "https://rseng.github.io/software/repository/github/wangchao-malab/DeepAc4C", "api_url": "https://rseng.github.io/software/api/repos/github/wangchao-malab/DeepAc4C"}, {"uid": "github/WSWUP/gridwxcomp", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/gridwxcomp", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/gridwxcomp"}, {"uid": "github/WSWUP/agweather-qaqc", "html_url": "https://rseng.github.io/software/repository/github/WSWUP/agweather-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/WSWUP/agweather-qaqc"}, {"uid": "github/esandford/EightBitTransit", "html_url": "https://rseng.github.io/software/repository/github/esandford/EightBitTransit", "api_url": "https://rseng.github.io/software/api/repos/github/esandford/EightBitTransit"}, {"uid": "github/AlanPearl/diffopt", "html_url": "https://rseng.github.io/software/repository/github/AlanPearl/diffopt", "api_url": "https://rseng.github.io/software/api/repos/github/AlanPearl/diffopt"}, {"uid": "github/sPaMFouR/RedPipe", "html_url": "https://rseng.github.io/software/repository/github/sPaMFouR/RedPipe", "api_url": "https://rseng.github.io/software/api/repos/github/sPaMFouR/RedPipe"}, {"uid": "github/fdebras/ECLIPS3D", "html_url": "https://rseng.github.io/software/repository/github/fdebras/ECLIPS3D", "api_url": "https://rseng.github.io/software/api/repos/github/fdebras/ECLIPS3D"}, {"uid": "github/adcameron/ffancy", "html_url": "https://rseng.github.io/software/repository/github/adcameron/ffancy", "api_url": "https://rseng.github.io/software/api/repos/github/adcameron/ffancy"}, {"uid": "github/hablabx/rfast", "html_url": "https://rseng.github.io/software/repository/github/hablabx/rfast", "api_url": "https://rseng.github.io/software/api/repos/github/hablabx/rfast"}, {"uid": "github/peikuan/WBBC", "html_url": "https://rseng.github.io/software/repository/github/peikuan/WBBC", "api_url": "https://rseng.github.io/software/api/repos/github/peikuan/WBBC"}, {"uid": "github/pkugyf/MST", "html_url": "https://rseng.github.io/software/repository/github/pkugyf/MST", "api_url": "https://rseng.github.io/software/api/repos/github/pkugyf/MST"}, {"uid": "github/chocoteam/pychoco", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/pychoco", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/pychoco"}, {"uid": "github/chocoteam/choco-solver", "html_url": "https://rseng.github.io/software/repository/github/chocoteam/choco-solver", "api_url": "https://rseng.github.io/software/api/repos/github/chocoteam/choco-solver"}, {"uid": "github/williamjameshandley/anesthetic", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/anesthetic", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/anesthetic"}, {"uid": "github/williamjameshandley/fgivenx", "html_url": "https://rseng.github.io/software/repository/github/williamjameshandley/fgivenx", "api_url": "https://rseng.github.io/software/api/repos/github/williamjameshandley/fgivenx"}, {"uid": "github/ChenYangyao/hipp", "html_url": "https://rseng.github.io/software/repository/github/ChenYangyao/hipp", "api_url": "https://rseng.github.io/software/api/repos/github/ChenYangyao/hipp"}, {"uid": "github/bezuidenhoutmc/SeeKAT", "html_url": "https://rseng.github.io/software/repository/github/bezuidenhoutmc/SeeKAT", "api_url": "https://rseng.github.io/software/api/repos/github/bezuidenhoutmc/SeeKAT"}, {"uid": "github/alex-b-davis/gubas", "html_url": "https://rseng.github.io/software/repository/github/alex-b-davis/gubas", "api_url": "https://rseng.github.io/software/api/repos/github/alex-b-davis/gubas"}, {"uid": "github/suchanek/proteusPy", "html_url": "https://rseng.github.io/software/repository/github/suchanek/proteusPy", "api_url": "https://rseng.github.io/software/api/repos/github/suchanek/proteusPy"}, {"uid": "github/computational-chemical-biology/ChemWalker", "html_url": "https://rseng.github.io/software/repository/github/computational-chemical-biology/ChemWalker", "api_url": "https://rseng.github.io/software/api/repos/github/computational-chemical-biology/ChemWalker"}, {"uid": "github/rcarragh/c212", "html_url": "https://rseng.github.io/software/repository/github/rcarragh/c212", "api_url": "https://rseng.github.io/software/api/repos/github/rcarragh/c212"}, {"uid": "github/dpthorngren/PlanetSlicer", "html_url": "https://rseng.github.io/software/repository/github/dpthorngren/PlanetSlicer", "api_url": "https://rseng.github.io/software/api/repos/github/dpthorngren/PlanetSlicer"}, {"uid": "github/rjtanner/StarburstPy", "html_url": "https://rseng.github.io/software/repository/github/rjtanner/StarburstPy", "api_url": "https://rseng.github.io/software/api/repos/github/rjtanner/StarburstPy"}, {"uid": "github/CBIIT-CGBB/gcMECM", "html_url": "https://rseng.github.io/software/repository/github/CBIIT-CGBB/gcMECM", "api_url": "https://rseng.github.io/software/api/repos/github/CBIIT-CGBB/gcMECM"}, {"uid": "github/pnnl/HyperNetX", "html_url": "https://rseng.github.io/software/repository/github/pnnl/HyperNetX", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/HyperNetX"}, {"uid": "github/pnnl/interflow", "html_url": "https://rseng.github.io/software/repository/github/pnnl/interflow", "api_url": "https://rseng.github.io/software/api/repos/github/pnnl/interflow"}, {"uid": "github/GOVS-pack/GOVS", "html_url": "https://rseng.github.io/software/repository/github/GOVS-pack/GOVS", "api_url": "https://rseng.github.io/software/api/repos/github/GOVS-pack/GOVS"}, {"uid": "github/johnlees/seer", "html_url": "https://rseng.github.io/software/repository/github/johnlees/seer", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/seer"}, {"uid": "github/johnlees/pp-sketchlib", "html_url": "https://rseng.github.io/software/repository/github/johnlees/pp-sketchlib", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/pp-sketchlib"}, {"uid": "github/johnlees/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/johnlees/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/johnlees/PopPUNK"}, {"uid": "github/melobio/Attune", "html_url": "https://rseng.github.io/software/repository/github/melobio/Attune", "api_url": "https://rseng.github.io/software/api/repos/github/melobio/Attune"}, {"uid": "github/meixichen/SpatialGEV", "html_url": "https://rseng.github.io/software/repository/github/meixichen/SpatialGEV", "api_url": "https://rseng.github.io/software/api/repos/github/meixichen/SpatialGEV"}, {"uid": "github/sverhoeven/docker-cartodb", "html_url": "https://rseng.github.io/software/repository/github/sverhoeven/docker-cartodb", "api_url": "https://rseng.github.io/software/api/repos/github/sverhoeven/docker-cartodb"}, {"uid": "github/andrew-saydjari/CloudCovErr.jl", "html_url": "https://rseng.github.io/software/repository/github/andrew-saydjari/CloudCovErr.jl", "api_url": "https://rseng.github.io/software/api/repos/github/andrew-saydjari/CloudCovErr.jl"}, {"uid": "github/multiscale/muscle3", "html_url": "https://rseng.github.io/software/repository/github/multiscale/muscle3", "api_url": "https://rseng.github.io/software/api/repos/github/multiscale/muscle3"}, {"uid": "github/panoptes-organization/panoptes", "html_url": "https://rseng.github.io/software/repository/github/panoptes-organization/panoptes", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes-organization/panoptes"}, {"uid": "github/andersdot/photoParallax", "html_url": "https://rseng.github.io/software/repository/github/andersdot/photoParallax", "api_url": "https://rseng.github.io/software/api/repos/github/andersdot/photoParallax"}, {"uid": "github/SietzeN/glottospace", "html_url": "https://rseng.github.io/software/repository/github/SietzeN/glottospace", "api_url": "https://rseng.github.io/software/api/repos/github/SietzeN/glottospace"}, {"uid": "github/almost6heads/ConleyDynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/almost6heads/ConleyDynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/almost6heads/ConleyDynamics.jl"}, {"uid": "github/Narayana-Rao/SAR-tools", "html_url": "https://rseng.github.io/software/repository/github/Narayana-Rao/SAR-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Narayana-Rao/SAR-tools"}, {"uid": "github/donaldRwilliams/BGGM", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/BGGM", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/BGGM"}, {"uid": "github/donaldRwilliams/GGMnonreg", "html_url": "https://rseng.github.io/software/repository/github/donaldRwilliams/GGMnonreg", "api_url": "https://rseng.github.io/software/api/repos/github/donaldRwilliams/GGMnonreg"}, {"uid": "github/GenomicParisCentre/toulligQC", "html_url": "https://rseng.github.io/software/repository/github/GenomicParisCentre/toulligQC", "api_url": "https://rseng.github.io/software/api/repos/github/GenomicParisCentre/toulligQC"}, {"uid": "github/martinjzhang/scDRS", "html_url": "https://rseng.github.io/software/repository/github/martinjzhang/scDRS", "api_url": "https://rseng.github.io/software/api/repos/github/martinjzhang/scDRS"}, {"uid": "github/vsoch/citelang", "html_url": "https://rseng.github.io/software/repository/github/vsoch/citelang", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/citelang"}, {"uid": "github/vsoch/gridtest", "html_url": "https://rseng.github.io/software/repository/github/vsoch/gridtest", "api_url": "https://rseng.github.io/software/api/repos/github/vsoch/gridtest"}, {"uid": "github/Cosmoglobe/zodipy", "html_url": "https://rseng.github.io/software/repository/github/Cosmoglobe/zodipy", "api_url": "https://rseng.github.io/software/api/repos/github/Cosmoglobe/zodipy"}, {"uid": "github/h3abionet/genesis2", "html_url": "https://rseng.github.io/software/repository/github/h3abionet/genesis2", "api_url": "https://rseng.github.io/software/api/repos/github/h3abionet/genesis2"}, {"uid": "github/cistib/origami", "html_url": "https://rseng.github.io/software/repository/github/cistib/origami", "api_url": "https://rseng.github.io/software/api/repos/github/cistib/origami"}, {"uid": "github/sidchaini/DistClassiPy", "html_url": "https://rseng.github.io/software/repository/github/sidchaini/DistClassiPy", "api_url": "https://rseng.github.io/software/api/repos/github/sidchaini/DistClassiPy"}, {"uid": "github/bbercovici/SBGAT", "html_url": "https://rseng.github.io/software/repository/github/bbercovici/SBGAT", "api_url": "https://rseng.github.io/software/api/repos/github/bbercovici/SBGAT"}, {"uid": "github/souzamonteiro/cnatool", "html_url": "https://rseng.github.io/software/repository/github/souzamonteiro/cnatool", "api_url": "https://rseng.github.io/software/api/repos/github/souzamonteiro/cnatool"}, {"uid": "github/igorrivin/graphem", "html_url": "https://rseng.github.io/software/repository/github/igorrivin/graphem", "api_url": "https://rseng.github.io/software/api/repos/github/igorrivin/graphem"}, {"uid": "github/KVSlab/VaMPy", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/VaMPy", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/VaMPy"}, {"uid": "github/KVSlab/turtleFSI", "html_url": "https://rseng.github.io/software/repository/github/KVSlab/turtleFSI", "api_url": "https://rseng.github.io/software/api/repos/github/KVSlab/turtleFSI"}, {"uid": "github/ckm3/Py-PDM", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Py-PDM", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Py-PDM"}, {"uid": "github/ckm3/Deep-Transit", "html_url": "https://rseng.github.io/software/repository/github/ckm3/Deep-Transit", "api_url": "https://rseng.github.io/software/api/repos/github/ckm3/Deep-Transit"}, {"uid": "github/raspishake/rsudp", "html_url": "https://rseng.github.io/software/repository/github/raspishake/rsudp", "api_url": "https://rseng.github.io/software/api/repos/github/raspishake/rsudp"}, {"uid": "github/hsinnan75/GSAlign", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/GSAlign", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/GSAlign"}, {"uid": "github/hsinnan75/MapCaller", "html_url": "https://rseng.github.io/software/repository/github/hsinnan75/MapCaller", "api_url": "https://rseng.github.io/software/api/repos/github/hsinnan75/MapCaller"}, {"uid": "github/wanpinglee/MOSAIK", "html_url": "https://rseng.github.io/software/repository/github/wanpinglee/MOSAIK", "api_url": "https://rseng.github.io/software/api/repos/github/wanpinglee/MOSAIK"}, {"uid": "github/bluefoxr/COINr", "html_url": "https://rseng.github.io/software/repository/github/bluefoxr/COINr", "api_url": "https://rseng.github.io/software/api/repos/github/bluefoxr/COINr"}, {"uid": "github/onsala-space-observatory/astromorph", "html_url": "https://rseng.github.io/software/repository/github/onsala-space-observatory/astromorph", "api_url": "https://rseng.github.io/software/api/repos/github/onsala-space-observatory/astromorph"}, {"uid": "github/PolymathicAI/AstroCLIP", "html_url": "https://rseng.github.io/software/repository/github/PolymathicAI/AstroCLIP", "api_url": "https://rseng.github.io/software/api/repos/github/PolymathicAI/AstroCLIP"}, {"uid": "github/PetervanLunteren/EcoAssist", "html_url": "https://rseng.github.io/software/repository/github/PetervanLunteren/EcoAssist", "api_url": "https://rseng.github.io/software/api/repos/github/PetervanLunteren/EcoAssist"}, {"uid": "github/naonori/hitomi", "html_url": "https://rseng.github.io/software/repository/github/naonori/hitomi", "api_url": "https://rseng.github.io/software/api/repos/github/naonori/hitomi"}, {"uid": "github/obertscheiderfhwn/RTMsim", "html_url": "https://rseng.github.io/software/repository/github/obertscheiderfhwn/RTMsim", "api_url": "https://rseng.github.io/software/api/repos/github/obertscheiderfhwn/RTMsim"}, {"uid": "github/matteobreschi/bajes", "html_url": "https://rseng.github.io/software/repository/github/matteobreschi/bajes", "api_url": "https://rseng.github.io/software/api/repos/github/matteobreschi/bajes"}, {"uid": "github/daehwankimlab/hisat2", "html_url": "https://rseng.github.io/software/repository/github/daehwankimlab/hisat2", "api_url": "https://rseng.github.io/software/api/repos/github/daehwankimlab/hisat2"}, {"uid": "github/ptiede/Comrade.jl", "html_url": "https://rseng.github.io/software/repository/github/ptiede/Comrade.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ptiede/Comrade.jl"}, {"uid": "github/Romea/romea-core-path", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-path", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-path"}, {"uid": "github/Romea/romea-ros2-teleop", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-teleop", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-teleop"}, {"uid": "github/Romea/romea-core-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-gps"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-core"}, {"uid": "github/Romea/romea-core-rtls", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-rtls", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-rtls"}, {"uid": "github/Romea/hunter", "html_url": "https://rseng.github.io/software/repository/github/Romea/hunter", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/hunter"}, {"uid": "github/Romea/romea-core-localisation-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-localisation-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-localisation-gps"}, {"uid": "github/Romea/romea-ros2-stereo-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-stereo-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-stereo-camera"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-core"}, {"uid": "github/Romea/romea-ros2-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-camera"}, {"uid": "github/Romea/romea-ros2-rgbd-camera", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-rgbd-camera", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-rgbd-camera"}, {"uid": "github/Romea/scout", "html_url": "https://rseng.github.io/software/repository/github/Romea/scout", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/scout"}, {"uid": "github/Romea/aroco", "html_url": "https://rseng.github.io/software/repository/github/Romea/aroco", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/aroco"}, {"uid": "github/Romea/romea-core-filtering", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-filtering", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-filtering"}, {"uid": "github/Romea/adap2e", "html_url": "https://rseng.github.io/software/repository/github/Romea/adap2e", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/adap2e"}, {"uid": "github/Romea/robucar", "html_url": "https://rseng.github.io/software/repository/github/Romea/robucar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/robucar"}, {"uid": "github/Romea/romea-core-common", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-common", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-common"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-core-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-core-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-core-imu"}, {"uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-cmd-mux", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-cmd-mux", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-cmd-mux"}, {"uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin"}, {"uid": "github/Romea/romea-ros2-lidar", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-lidar", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-lidar"}, {"uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-robot-to-robot-localisation-core"}, {"uid": "github/Romea/husky", "html_url": "https://rseng.github.io/software/repository/github/Romea/husky", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/husky"}, {"uid": "github/Romea/cinteo", "html_url": "https://rseng.github.io/software/repository/github/Romea/cinteo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/cinteo"}, {"uid": "github/Romea/romea-ros2-imu", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-imu", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-imu"}, {"uid": "github/Romea/romea-ros2-joy", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-joy", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-joy"}, {"uid": "github/Romea/alpo", "html_url": "https://rseng.github.io/software/repository/github/Romea/alpo", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/alpo"}, {"uid": "github/Romea/romea-ros2-localisation-utils", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-localisation-utils", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-localisation-utils"}, {"uid": "github/Romea/romea-ros2-gps", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-gps", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-gps"}, {"uid": "github/Romea/romea-ros2-mobile-base", "html_url": "https://rseng.github.io/software/repository/github/Romea/romea-ros2-mobile-base", "api_url": "https://rseng.github.io/software/api/repos/github/Romea/romea-ros2-mobile-base"}, {"uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", "html_url": "https://rseng.github.io/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/R-Vessel-X/SlicerRVXLiverSegmentation"}, {"uid": "github/bxlab/bx-python", "html_url": "https://rseng.github.io/software/repository/github/bxlab/bx-python", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/bx-python"}, {"uid": "github/bxlab/metaWRAP", "html_url": "https://rseng.github.io/software/repository/github/bxlab/metaWRAP", "api_url": "https://rseng.github.io/software/api/repos/github/bxlab/metaWRAP"}, {"uid": "github/bharathramh/STRIDE-DB_Codes", "html_url": "https://rseng.github.io/software/repository/github/bharathramh/STRIDE-DB_Codes", "api_url": "https://rseng.github.io/software/api/repos/github/bharathramh/STRIDE-DB_Codes"}, {"uid": "github/lsds/LightSaber", "html_url": "https://rseng.github.io/software/repository/github/lsds/LightSaber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/LightSaber"}, {"uid": "github/lsds/TaLoS", "html_url": "https://rseng.github.io/software/repository/github/lsds/TaLoS", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/TaLoS"}, {"uid": "github/lsds/SEEP", "html_url": "https://rseng.github.io/software/repository/github/lsds/SEEP", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/SEEP"}, {"uid": "github/lsds/Saber", "html_url": "https://rseng.github.io/software/repository/github/lsds/Saber", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Saber"}, {"uid": "github/lsds/Crossbow", "html_url": "https://rseng.github.io/software/repository/github/lsds/Crossbow", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Crossbow"}, {"uid": "github/lsds/sgx-lkl", "html_url": "https://rseng.github.io/software/repository/github/lsds/sgx-lkl", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/sgx-lkl"}, {"uid": "github/lsds/Neptune", "html_url": "https://rseng.github.io/software/repository/github/lsds/Neptune", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Neptune"}, {"uid": "github/lsds/faasm", "html_url": "https://rseng.github.io/software/repository/github/lsds/faasm", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/faasm"}, {"uid": "github/lsds/KungFu", "html_url": "https://rseng.github.io/software/repository/github/lsds/KungFu", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/KungFu"}, {"uid": "github/lsds/Teechain", "html_url": "https://rseng.github.io/software/repository/github/lsds/Teechain", "api_url": "https://rseng.github.io/software/api/repos/github/lsds/Teechain"}, {"uid": "github/RongquanWang/ELF-DPC", "html_url": "https://rseng.github.io/software/repository/github/RongquanWang/ELF-DPC", "api_url": "https://rseng.github.io/software/api/repos/github/RongquanWang/ELF-DPC"}, {"uid": "github/ebundhoo/TAGOPSIN", "html_url": "https://rseng.github.io/software/repository/github/ebundhoo/TAGOPSIN", "api_url": "https://rseng.github.io/software/api/repos/github/ebundhoo/TAGOPSIN"}, {"uid": "github/akinremisa/rfsed", "html_url": "https://rseng.github.io/software/repository/github/akinremisa/rfsed", "api_url": "https://rseng.github.io/software/api/repos/github/akinremisa/rfsed"}, {"uid": "github/ExaScience/elprep", "html_url": "https://rseng.github.io/software/repository/github/ExaScience/elprep", "api_url": "https://rseng.github.io/software/api/repos/github/ExaScience/elprep"}, {"uid": "github/JamieDietrich/dynamite", "html_url": "https://rseng.github.io/software/repository/github/JamieDietrich/dynamite", "api_url": "https://rseng.github.io/software/api/repos/github/JamieDietrich/dynamite"}, {"uid": "github/yanzhanglab/Graph2GO", "html_url": "https://rseng.github.io/software/repository/github/yanzhanglab/Graph2GO", "api_url": "https://rseng.github.io/software/api/repos/github/yanzhanglab/Graph2GO"}, {"uid": "github/gabraham/flashpca", "html_url": "https://rseng.github.io/software/repository/github/gabraham/flashpca", "api_url": "https://rseng.github.io/software/api/repos/github/gabraham/flashpca"}, {"uid": "github/csb5/lofreq", "html_url": "https://rseng.github.io/software/repository/github/csb5/lofreq", "api_url": "https://rseng.github.io/software/api/repos/github/csb5/lofreq"}, {"uid": "github/sb-ncbr/golem", "html_url": "https://rseng.github.io/software/repository/github/sb-ncbr/golem", "api_url": "https://rseng.github.io/software/api/repos/github/sb-ncbr/golem"}, {"uid": "github/LBC-LNBio/parKVFinder-win", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/parKVFinder-win", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/parKVFinder-win"}, {"uid": "github/LBC-LNBio/pyKVFinder", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/pyKVFinder", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/pyKVFinder"}, {"uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "html_url": "https://rseng.github.io/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/LBC-LNBio/PyMOL-KVFinder-web-Tools"}, {"uid": "github/hsocasnavarro/NICOLE", "html_url": "https://rseng.github.io/software/repository/github/hsocasnavarro/NICOLE", "api_url": "https://rseng.github.io/software/api/repos/github/hsocasnavarro/NICOLE"}, {"uid": "github/ianvcaldas/smalldisco", "html_url": "https://rseng.github.io/software/repository/github/ianvcaldas/smalldisco", "api_url": "https://rseng.github.io/software/api/repos/github/ianvcaldas/smalldisco"}, {"uid": "github/johncwok/CategoricalTimeSeries.jl", "html_url": "https://rseng.github.io/software/repository/github/johncwok/CategoricalTimeSeries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/johncwok/CategoricalTimeSeries.jl"}, {"uid": "github/mne-tools/mne-lsl", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-lsl", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-lsl"}, {"uid": "github/mne-tools/mne-icalabel", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-icalabel", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-icalabel"}, {"uid": "github/mne-tools/mne-python", "html_url": "https://rseng.github.io/software/repository/github/mne-tools/mne-python", "api_url": "https://rseng.github.io/software/api/repos/github/mne-tools/mne-python"}, {"uid": "github/milkschen/leviosam2", "html_url": "https://rseng.github.io/software/repository/github/milkschen/leviosam2", "api_url": "https://rseng.github.io/software/api/repos/github/milkschen/leviosam2"}, {"uid": "github/gnave/pybranch", "html_url": "https://rseng.github.io/software/repository/github/gnave/pybranch", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/pybranch"}, {"uid": "github/gnave/Xgremlin", "html_url": "https://rseng.github.io/software/repository/github/gnave/Xgremlin", "api_url": "https://rseng.github.io/software/api/repos/github/gnave/Xgremlin"}, {"uid": "github/NOSALRO/robot_dart", "html_url": "https://rseng.github.io/software/repository/github/NOSALRO/robot_dart", "api_url": "https://rseng.github.io/software/api/repos/github/NOSALRO/robot_dart"}, {"uid": "github/SSAGESproject/SSAGES", "html_url": "https://rseng.github.io/software/repository/github/SSAGESproject/SSAGES", "api_url": "https://rseng.github.io/software/api/repos/github/SSAGESproject/SSAGES"}, {"uid": "github/jeetsukumaran/DendroPy", "html_url": "https://rseng.github.io/software/repository/github/jeetsukumaran/DendroPy", "api_url": "https://rseng.github.io/software/api/repos/github/jeetsukumaran/DendroPy"}, {"uid": "github/ucl-exoplanets/pylightcurve", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/pylightcurve", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/pylightcurve"}, {"uid": "github/ucl-exoplanets/ExoGAN_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoGAN_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoGAN_public"}, {"uid": "github/ucl-exoplanets/TauREx3_public", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/TauREx3_public", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/TauREx3_public"}, {"uid": "github/ucl-exoplanets/ExoTETHyS", "html_url": "https://rseng.github.io/software/repository/github/ucl-exoplanets/ExoTETHyS", "api_url": "https://rseng.github.io/software/api/repos/github/ucl-exoplanets/ExoTETHyS"}, {"uid": "github/annehutter/grid-model", "html_url": "https://rseng.github.io/software/repository/github/annehutter/grid-model", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/grid-model"}, {"uid": "github/annehutter/polyspectrum", "html_url": "https://rseng.github.io/software/repository/github/annehutter/polyspectrum", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/polyspectrum"}, {"uid": "github/annehutter/astraeus", "html_url": "https://rseng.github.io/software/repository/github/annehutter/astraeus", "api_url": "https://rseng.github.io/software/api/repos/github/annehutter/astraeus"}, {"uid": "github/mosdef-hub/foyer", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/foyer", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/foyer"}, {"uid": "github/mosdef-hub/mbuild", "html_url": "https://rseng.github.io/software/repository/github/mosdef-hub/mbuild", "api_url": "https://rseng.github.io/software/api/repos/github/mosdef-hub/mbuild"}, {"uid": "github/hsso/crete", "html_url": "https://rseng.github.io/software/repository/github/hsso/crete", "api_url": "https://rseng.github.io/software/api/repos/github/hsso/crete"}, {"uid": "github/glis-glis/loci", "html_url": "https://rseng.github.io/software/repository/github/glis-glis/loci", "api_url": "https://rseng.github.io/software/api/repos/github/glis-glis/loci"}, {"uid": "github/PhenoApps/Coordinate", "html_url": "https://rseng.github.io/software/repository/github/PhenoApps/Coordinate", "api_url": "https://rseng.github.io/software/api/repos/github/PhenoApps/Coordinate"}, {"uid": "github/rordenlab/dcm2niix", "html_url": "https://rseng.github.io/software/repository/github/rordenlab/dcm2niix", "api_url": "https://rseng.github.io/software/api/repos/github/rordenlab/dcm2niix"}, {"uid": "github/iancze/DiskJockey", "html_url": "https://rseng.github.io/software/repository/github/iancze/DiskJockey", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/DiskJockey"}, {"uid": "github/iancze/PSOAP", "html_url": "https://rseng.github.io/software/repository/github/iancze/PSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/iancze/PSOAP"}, {"uid": "github/vsulis5357/Sonification", "html_url": "https://rseng.github.io/software/repository/github/vsulis5357/Sonification", "api_url": "https://rseng.github.io/software/api/repos/github/vsulis5357/Sonification"}, {"uid": "github/enthought/mayavi", "html_url": "https://rseng.github.io/software/repository/github/enthought/mayavi", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/mayavi"}, {"uid": "github/enthought/vpsearch", "html_url": "https://rseng.github.io/software/repository/github/enthought/vpsearch", "api_url": "https://rseng.github.io/software/api/repos/github/enthought/vpsearch"}, {"uid": "github/tud-hri/travia", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/travia", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/travia"}, {"uid": "github/tud-hri/joan", "html_url": "https://rseng.github.io/software/repository/github/tud-hri/joan", "api_url": "https://rseng.github.io/software/api/repos/github/tud-hri/joan"}, {"uid": "github/gouverneurp/eVAS", "html_url": "https://rseng.github.io/software/repository/github/gouverneurp/eVAS", "api_url": "https://rseng.github.io/software/api/repos/github/gouverneurp/eVAS"}, {"uid": "github/jamesrhester/Lerche.jl", "html_url": "https://rseng.github.io/software/repository/github/jamesrhester/Lerche.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jamesrhester/Lerche.jl"}, {"uid": "github/moranegg/deposit-template", "html_url": "https://rseng.github.io/software/repository/github/moranegg/deposit-template", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/deposit-template"}, {"uid": "github/moranegg/AffectationRO", "html_url": "https://rseng.github.io/software/repository/github/moranegg/AffectationRO", "api_url": "https://rseng.github.io/software/api/repos/github/moranegg/AffectationRO"}, {"uid": "github/SolavLab/DuoDIC", "html_url": "https://rseng.github.io/software/repository/github/SolavLab/DuoDIC", "api_url": "https://rseng.github.io/software/api/repos/github/SolavLab/DuoDIC"}, {"uid": "github/stevengiacalone/triceratops", "html_url": "https://rseng.github.io/software/repository/github/stevengiacalone/triceratops", "api_url": "https://rseng.github.io/software/api/repos/github/stevengiacalone/triceratops"}, {"uid": "github/JelfsMaterialsGroup/stk", "html_url": "https://rseng.github.io/software/repository/github/JelfsMaterialsGroup/stk", "api_url": "https://rseng.github.io/software/api/repos/github/JelfsMaterialsGroup/stk"}, {"uid": "github/CmPA/iPic3D", "html_url": "https://rseng.github.io/software/repository/github/CmPA/iPic3D", "api_url": "https://rseng.github.io/software/api/repos/github/CmPA/iPic3D"}, {"uid": "github/mcgalcode/pylattica", "html_url": "https://rseng.github.io/software/repository/github/mcgalcode/pylattica", "api_url": "https://rseng.github.io/software/api/repos/github/mcgalcode/pylattica"}, {"uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", "html_url": "https://rseng.github.io/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasEdwardRiley/xpsi-pre-transfer"}, {"uid": "github/libdynd/dynd-python", "html_url": "https://rseng.github.io/software/repository/github/libdynd/dynd-python", "api_url": "https://rseng.github.io/software/api/repos/github/libdynd/dynd-python"}, {"uid": "github/Professor-G/MicroLIA", "html_url": "https://rseng.github.io/software/repository/github/Professor-G/MicroLIA", "api_url": "https://rseng.github.io/software/api/repos/github/Professor-G/MicroLIA"}, {"uid": "github/actris-cloudnet/mwrpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/mwrpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/mwrpy"}, {"uid": "github/actris-cloudnet/cloudnetpy", "html_url": "https://rseng.github.io/software/repository/github/actris-cloudnet/cloudnetpy", "api_url": "https://rseng.github.io/software/api/repos/github/actris-cloudnet/cloudnetpy"}, {"uid": "github/jo276/EvapMass", "html_url": "https://rseng.github.io/software/repository/github/jo276/EvapMass", "api_url": "https://rseng.github.io/software/api/repos/github/jo276/EvapMass"}, {"uid": "github/medema-group/bigslice", "html_url": "https://rseng.github.io/software/repository/github/medema-group/bigslice", "api_url": "https://rseng.github.io/software/api/repos/github/medema-group/bigslice"}, {"uid": "github/bhhua/vacuumtunneling", "html_url": "https://rseng.github.io/software/repository/github/bhhua/vacuumtunneling", "api_url": "https://rseng.github.io/software/api/repos/github/bhhua/vacuumtunneling"}, {"uid": "github/getzlab/rnaseqc", "html_url": "https://rseng.github.io/software/repository/github/getzlab/rnaseqc", "api_url": "https://rseng.github.io/software/api/repos/github/getzlab/rnaseqc"}, {"uid": "github/QuaCaTeam/quaca", "html_url": "https://rseng.github.io/software/repository/github/QuaCaTeam/quaca", "api_url": "https://rseng.github.io/software/api/repos/github/QuaCaTeam/quaca"}, {"uid": "github/cylammarco/ASPIRED", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/ASPIRED", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/ASPIRED"}, {"uid": "github/cylammarco/WDPhotTools", "html_url": "https://rseng.github.io/software/repository/github/cylammarco/WDPhotTools", "api_url": "https://rseng.github.io/software/api/repos/github/cylammarco/WDPhotTools"}, {"uid": "github/pangeo-data/climpred", "html_url": "https://rseng.github.io/software/repository/github/pangeo-data/climpred", "api_url": "https://rseng.github.io/software/api/repos/github/pangeo-data/climpred"}, {"uid": "github/lucabaldini/ixpeobssim", "html_url": "https://rseng.github.io/software/repository/github/lucabaldini/ixpeobssim", "api_url": "https://rseng.github.io/software/api/repos/github/lucabaldini/ixpeobssim"}, {"uid": "github/SchmollerLab/Cell_ACDC", "html_url": "https://rseng.github.io/software/repository/github/SchmollerLab/Cell_ACDC", "api_url": "https://rseng.github.io/software/api/repos/github/SchmollerLab/Cell_ACDC"}, {"uid": "github/ariedel/lacewing", "html_url": "https://rseng.github.io/software/repository/github/ariedel/lacewing", "api_url": "https://rseng.github.io/software/api/repos/github/ariedel/lacewing"}, {"uid": "github/cajohare/NeutrinoFog", "html_url": "https://rseng.github.io/software/repository/github/cajohare/NeutrinoFog", "api_url": "https://rseng.github.io/software/api/repos/github/cajohare/NeutrinoFog"}, {"uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "html_url": "https://rseng.github.io/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", "api_url": "https://rseng.github.io/software/api/repos/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions"}, {"uid": "github/phenology/cgc", "html_url": "https://rseng.github.io/software/repository/github/phenology/cgc", "api_url": "https://rseng.github.io/software/api/repos/github/phenology/cgc"}, {"uid": "github/MarkMageeAstro/Riddler", "html_url": "https://rseng.github.io/software/repository/github/MarkMageeAstro/Riddler", "api_url": "https://rseng.github.io/software/api/repos/github/MarkMageeAstro/Riddler"}, {"uid": "github/oruhnau/when2heat", "html_url": "https://rseng.github.io/software/repository/github/oruhnau/when2heat", "api_url": "https://rseng.github.io/software/api/repos/github/oruhnau/when2heat"}, {"uid": "github/yangyanli/DO-Conv", "html_url": "https://rseng.github.io/software/repository/github/yangyanli/DO-Conv", "api_url": "https://rseng.github.io/software/api/repos/github/yangyanli/DO-Conv"}, {"uid": "github/y-256/libdivsufsort", "html_url": "https://rseng.github.io/software/repository/github/y-256/libdivsufsort", "api_url": "https://rseng.github.io/software/api/repos/github/y-256/libdivsufsort"}, {"uid": "github/pudeIko/piva", "html_url": "https://rseng.github.io/software/repository/github/pudeIko/piva", "api_url": "https://rseng.github.io/software/api/repos/github/pudeIko/piva"}, {"uid": "github/nicokurtovic/SIMIO", "html_url": "https://rseng.github.io/software/repository/github/nicokurtovic/SIMIO", "api_url": "https://rseng.github.io/software/api/repos/github/nicokurtovic/SIMIO"}, {"uid": "github/nye17/javelin", "html_url": "https://rseng.github.io/software/repository/github/nye17/javelin", "api_url": "https://rseng.github.io/software/api/repos/github/nye17/javelin"}, {"uid": "github/mrvollger/rustybam", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/rustybam", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/rustybam"}, {"uid": "github/mrvollger/fibertools-rs", "html_url": "https://rseng.github.io/software/repository/github/mrvollger/fibertools-rs", "api_url": "https://rseng.github.io/software/api/repos/github/mrvollger/fibertools-rs"}, {"uid": "github/rdicosmo/parmap", "html_url": "https://rseng.github.io/software/repository/github/rdicosmo/parmap", "api_url": "https://rseng.github.io/software/api/repos/github/rdicosmo/parmap"}, {"uid": "github/cagrikymk/JAX-ReaxFF", "html_url": "https://rseng.github.io/software/repository/github/cagrikymk/JAX-ReaxFF", "api_url": "https://rseng.github.io/software/api/repos/github/cagrikymk/JAX-ReaxFF"}, {"uid": "github/devsim/devsim", "html_url": "https://rseng.github.io/software/repository/github/devsim/devsim", "api_url": "https://rseng.github.io/software/api/repos/github/devsim/devsim"}, {"uid": "github/spack/spack", "html_url": "https://rseng.github.io/software/repository/github/spack/spack", "api_url": "https://rseng.github.io/software/api/repos/github/spack/spack"}, {"uid": "github/isakro/shoredate", "html_url": "https://rseng.github.io/software/repository/github/isakro/shoredate", "api_url": "https://rseng.github.io/software/api/repos/github/isakro/shoredate"}, {"uid": "github/HuttleyLab/scitrack", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/scitrack", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/scitrack"}, {"uid": "github/HuttleyLab/DiverseSeq", "html_url": "https://rseng.github.io/software/repository/github/HuttleyLab/DiverseSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HuttleyLab/DiverseSeq"}, {"uid": "github/ratschlab/metagraph", "html_url": "https://rseng.github.io/software/repository/github/ratschlab/metagraph", "api_url": "https://rseng.github.io/software/api/repos/github/ratschlab/metagraph"}, {"uid": "github/nlesc-sherlock/Rig", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/Rig", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/Rig"}, {"uid": "github/nlesc-sherlock/emma", "html_url": "https://rseng.github.io/software/repository/github/nlesc-sherlock/emma", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-sherlock/emma"}, {"uid": "github/FiorenSt/AutoSourceID-Light", "html_url": "https://rseng.github.io/software/repository/github/FiorenSt/AutoSourceID-Light", "api_url": "https://rseng.github.io/software/api/repos/github/FiorenSt/AutoSourceID-Light"}, {"uid": "github/nboley/idr", "html_url": "https://rseng.github.io/software/repository/github/nboley/idr", "api_url": "https://rseng.github.io/software/api/repos/github/nboley/idr"}, {"uid": "github/gmrandazzo/libscientific", "html_url": "https://rseng.github.io/software/repository/github/gmrandazzo/libscientific", "api_url": "https://rseng.github.io/software/api/repos/github/gmrandazzo/libscientific"}, {"uid": "github/WGS-TB/MentaLiST", "html_url": "https://rseng.github.io/software/repository/github/WGS-TB/MentaLiST", "api_url": "https://rseng.github.io/software/api/repos/github/WGS-TB/MentaLiST"}, {"uid": "github/jranalli/solartoolbox", "html_url": "https://rseng.github.io/software/repository/github/jranalli/solartoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/jranalli/solartoolbox"}, {"uid": "github/EigenDev/simbi", "html_url": "https://rseng.github.io/software/repository/github/EigenDev/simbi", "api_url": "https://rseng.github.io/software/api/repos/github/EigenDev/simbi"}, {"uid": "github/songlabcodes/MSC", "html_url": "https://rseng.github.io/software/repository/github/songlabcodes/MSC", "api_url": "https://rseng.github.io/software/api/repos/github/songlabcodes/MSC"}, {"uid": "github/JCGoran/coffe", "html_url": "https://rseng.github.io/software/repository/github/JCGoran/coffe", "api_url": "https://rseng.github.io/software/api/repos/github/JCGoran/coffe"}, {"uid": "github/jdhenshaw/scousepy", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/scousepy", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/scousepy"}, {"uid": "github/jdhenshaw/acorns", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/acorns", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/acorns"}, {"uid": "github/jdhenshaw/SCOUSE", "html_url": "https://rseng.github.io/software/repository/github/jdhenshaw/SCOUSE", "api_url": "https://rseng.github.io/software/api/repos/github/jdhenshaw/SCOUSE"}, {"uid": "github/isaackd/wcloud", "html_url": "https://rseng.github.io/software/repository/github/isaackd/wcloud", "api_url": "https://rseng.github.io/software/api/repos/github/isaackd/wcloud"}, {"uid": "github/wlloyduw/ContainerProfiler", "html_url": "https://rseng.github.io/software/repository/github/wlloyduw/ContainerProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/wlloyduw/ContainerProfiler"}, {"uid": "github/SynthSys/pyOmeroUpload", "html_url": "https://rseng.github.io/software/repository/github/SynthSys/pyOmeroUpload", "api_url": "https://rseng.github.io/software/api/repos/github/SynthSys/pyOmeroUpload"}, {"uid": "github/DeltaRCM/pyDeltaRCM", "html_url": "https://rseng.github.io/software/repository/github/DeltaRCM/pyDeltaRCM", "api_url": "https://rseng.github.io/software/api/repos/github/DeltaRCM/pyDeltaRCM"}, {"uid": "github/wangbingjie/sbi_pp", "html_url": "https://rseng.github.io/software/repository/github/wangbingjie/sbi_pp", "api_url": "https://rseng.github.io/software/api/repos/github/wangbingjie/sbi_pp"}, {"uid": "github/m-d-grunnill/MetaCast", "html_url": "https://rseng.github.io/software/repository/github/m-d-grunnill/MetaCast", "api_url": "https://rseng.github.io/software/api/repos/github/m-d-grunnill/MetaCast"}, {"uid": "github/JuliaQX/QXTools.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQX/QXTools.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQX/QXTools.jl"}, {"uid": "github/holmescao/ANTS_marking_and_analysis_tools", "html_url": "https://rseng.github.io/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", "api_url": "https://rseng.github.io/software/api/repos/github/holmescao/ANTS_marking_and_analysis_tools"}, {"uid": "github/PSims/BayesEoR", "html_url": "https://rseng.github.io/software/repository/github/PSims/BayesEoR", "api_url": "https://rseng.github.io/software/api/repos/github/PSims/BayesEoR"}, {"uid": "github/molscat/molscat", "html_url": "https://rseng.github.io/software/repository/github/molscat/molscat", "api_url": "https://rseng.github.io/software/api/repos/github/molscat/molscat"}, {"uid": "github/mberto79/XCALibre.jl", "html_url": "https://rseng.github.io/software/repository/github/mberto79/XCALibre.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mberto79/XCALibre.jl"}, {"uid": "github/neuroanatomy/thresholdmann", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/thresholdmann", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/thresholdmann"}, {"uid": "github/neuroanatomy/reorient", "html_url": "https://rseng.github.io/software/repository/github/neuroanatomy/reorient", "api_url": "https://rseng.github.io/software/api/repos/github/neuroanatomy/reorient"}, {"uid": "github/hanyk/BayeSED3", "html_url": "https://rseng.github.io/software/repository/github/hanyk/BayeSED3", "api_url": "https://rseng.github.io/software/api/repos/github/hanyk/BayeSED3"}, {"uid": "github/sidmohite/nimbus-astro", "html_url": "https://rseng.github.io/software/repository/github/sidmohite/nimbus-astro", "api_url": "https://rseng.github.io/software/api/repos/github/sidmohite/nimbus-astro"}, {"uid": "github/Wimmics/olivaw", "html_url": "https://rseng.github.io/software/repository/github/Wimmics/olivaw", "api_url": "https://rseng.github.io/software/api/repos/github/Wimmics/olivaw"}, {"uid": "github/dcorre/otrain", "html_url": "https://rseng.github.io/software/repository/github/dcorre/otrain", "api_url": "https://rseng.github.io/software/api/repos/github/dcorre/otrain"}, {"uid": "github/AlanRace/imzMLConverter", "html_url": "https://rseng.github.io/software/repository/github/AlanRace/imzMLConverter", "api_url": "https://rseng.github.io/software/api/repos/github/AlanRace/imzMLConverter"}, {"uid": "github/transientskp/pyse", "html_url": "https://rseng.github.io/software/repository/github/transientskp/pyse", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/pyse"}, {"uid": "github/transientskp/lpf", "html_url": "https://rseng.github.io/software/repository/github/transientskp/lpf", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/lpf"}, {"uid": "github/transientskp/tkp", "html_url": "https://rseng.github.io/software/repository/github/transientskp/tkp", "api_url": "https://rseng.github.io/software/api/repos/github/transientskp/tkp"}, {"uid": "github/sonjageorgievska/CClusTera", "html_url": "https://rseng.github.io/software/repository/github/sonjageorgievska/CClusTera", "api_url": "https://rseng.github.io/software/api/repos/github/sonjageorgievska/CClusTera"}, {"uid": "github/Sudaraka88/LDWeaver", "html_url": "https://rseng.github.io/software/repository/github/Sudaraka88/LDWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/Sudaraka88/LDWeaver"}, {"uid": "github/achaikova/frbmclust", "html_url": "https://rseng.github.io/software/repository/github/achaikova/frbmclust", "api_url": "https://rseng.github.io/software/api/repos/github/achaikova/frbmclust"}, {"uid": "github/cran/irtplay", "html_url": "https://rseng.github.io/software/repository/github/cran/irtplay", "api_url": "https://rseng.github.io/software/api/repos/github/cran/irtplay"}, {"uid": "github/SGpp/DisCoTec", "html_url": "https://rseng.github.io/software/repository/github/SGpp/DisCoTec", "api_url": "https://rseng.github.io/software/api/repos/github/SGpp/DisCoTec"}, {"uid": "github/mjcarley/nbi", "html_url": "https://rseng.github.io/software/repository/github/mjcarley/nbi", "api_url": "https://rseng.github.io/software/api/repos/github/mjcarley/nbi"}, {"uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "html_url": "https://rseng.github.io/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/leonidprinceton/LightweightSpaceCoronagraphSimulator"}, {"uid": "github/rbturnbull/ausdex", "html_url": "https://rseng.github.io/software/repository/github/rbturnbull/ausdex", "api_url": "https://rseng.github.io/software/api/repos/github/rbturnbull/ausdex"}, {"uid": "github/Nic5472K/ScientificData2021_HealthGym", "html_url": "https://rseng.github.io/software/repository/github/Nic5472K/ScientificData2021_HealthGym", "api_url": "https://rseng.github.io/software/api/repos/github/Nic5472K/ScientificData2021_HealthGym"}, {"uid": "github/lastz/lastz", "html_url": "https://rseng.github.io/software/repository/github/lastz/lastz", "api_url": "https://rseng.github.io/software/api/repos/github/lastz/lastz"}, {"uid": "github/singularityhub/singularity-hpc", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-hpc", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-hpc"}, {"uid": "github/singularityhub/singularity-compose", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/singularity-compose", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/singularity-compose"}, {"uid": "github/singularityhub/sregistry", "html_url": "https://rseng.github.io/software/repository/github/singularityhub/sregistry", "api_url": "https://rseng.github.io/software/api/repos/github/singularityhub/sregistry"}, {"uid": "github/biomed-AI/GraphBepi", "html_url": "https://rseng.github.io/software/repository/github/biomed-AI/GraphBepi", "api_url": "https://rseng.github.io/software/api/repos/github/biomed-AI/GraphBepi"}, {"uid": "github/ZhantianXu/PISAD", "html_url": "https://rseng.github.io/software/repository/github/ZhantianXu/PISAD", "api_url": "https://rseng.github.io/software/api/repos/github/ZhantianXu/PISAD"}, {"uid": "github/StingraySoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/stingray"}, {"uid": "github/StingraySoftware/HENDRICS", "html_url": "https://rseng.github.io/software/repository/github/StingraySoftware/HENDRICS", "api_url": "https://rseng.github.io/software/api/repos/github/StingraySoftware/HENDRICS"}, {"uid": "github/abelson-lab/smMIP-tools", "html_url": "https://rseng.github.io/software/repository/github/abelson-lab/smMIP-tools", "api_url": "https://rseng.github.io/software/api/repos/github/abelson-lab/smMIP-tools"}, {"uid": "github/Novartis/torchsurv", "html_url": "https://rseng.github.io/software/repository/github/Novartis/torchsurv", "api_url": "https://rseng.github.io/software/api/repos/github/Novartis/torchsurv"}, {"uid": "github/segasai/q3c", "html_url": "https://rseng.github.io/software/repository/github/segasai/q3c", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/q3c"}, {"uid": "github/segasai/rvspecfit", "html_url": "https://rseng.github.io/software/repository/github/segasai/rvspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/segasai/rvspecfit"}, {"uid": "github/Ge-Lab/USAT", "html_url": "https://rseng.github.io/software/repository/github/Ge-Lab/USAT", "api_url": "https://rseng.github.io/software/api/repos/github/Ge-Lab/USAT"}, {"uid": "github/nhcrisp/ADBSat", "html_url": "https://rseng.github.io/software/repository/github/nhcrisp/ADBSat", "api_url": "https://rseng.github.io/software/api/repos/github/nhcrisp/ADBSat"}, {"uid": "github/BASTAcode/BASTA", "html_url": "https://rseng.github.io/software/repository/github/BASTAcode/BASTA", "api_url": "https://rseng.github.io/software/api/repos/github/BASTAcode/BASTA"}, {"uid": "github/insilicomedicine/GENTRL", "html_url": "https://rseng.github.io/software/repository/github/insilicomedicine/GENTRL", "api_url": "https://rseng.github.io/software/api/repos/github/insilicomedicine/GENTRL"}, {"uid": "github/swiftsim/swiftsimio", "html_url": "https://rseng.github.io/software/repository/github/swiftsim/swiftsimio", "api_url": "https://rseng.github.io/software/api/repos/github/swiftsim/swiftsimio"}, {"uid": "github/timchurches/NetEpi-Collection", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Collection", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Collection"}, {"uid": "github/timchurches/NetEpi-Analysis", "html_url": "https://rseng.github.io/software/repository/github/timchurches/NetEpi-Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/timchurches/NetEpi-Analysis"}, {"uid": "github/biocore-ntnu/epic2", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/epic2", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/epic2"}, {"uid": "github/biocore-ntnu/ncls", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/ncls", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/ncls"}, {"uid": "github/biocore-ntnu/pyranges", "html_url": "https://rseng.github.io/software/repository/github/biocore-ntnu/pyranges", "api_url": "https://rseng.github.io/software/api/repos/github/biocore-ntnu/pyranges"}, {"uid": "github/Valar-hub/MMLPhoto-z", "html_url": "https://rseng.github.io/software/repository/github/Valar-hub/MMLPhoto-z", "api_url": "https://rseng.github.io/software/api/repos/github/Valar-hub/MMLPhoto-z"}, {"uid": "github/dputhier/pygtftk", "html_url": "https://rseng.github.io/software/repository/github/dputhier/pygtftk", "api_url": "https://rseng.github.io/software/api/repos/github/dputhier/pygtftk"}, {"uid": "github/MetaCell/scicrunch-antibody-registry", "html_url": "https://rseng.github.io/software/repository/github/MetaCell/scicrunch-antibody-registry", "api_url": "https://rseng.github.io/software/api/repos/github/MetaCell/scicrunch-antibody-registry"}, {"uid": "github/bhi-kimlab/StressGenePred", "html_url": "https://rseng.github.io/software/repository/github/bhi-kimlab/StressGenePred", "api_url": "https://rseng.github.io/software/api/repos/github/bhi-kimlab/StressGenePred"}, {"uid": "github/drphilmarshall/HumVI", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/HumVI", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/HumVI"}, {"uid": "github/drphilmarshall/Pangloss", "html_url": "https://rseng.github.io/software/repository/github/drphilmarshall/Pangloss", "api_url": "https://rseng.github.io/software/api/repos/github/drphilmarshall/Pangloss"}, {"uid": "github/dunhamlab/PacRAT", "html_url": "https://rseng.github.io/software/repository/github/dunhamlab/PacRAT", "api_url": "https://rseng.github.io/software/api/repos/github/dunhamlab/PacRAT"}, {"uid": "github/rchartra/NcCut", "html_url": "https://rseng.github.io/software/repository/github/rchartra/NcCut", "api_url": "https://rseng.github.io/software/api/repos/github/rchartra/NcCut"}, {"uid": "github/blackrim/phyutility", "html_url": "https://rseng.github.io/software/repository/github/blackrim/phyutility", "api_url": "https://rseng.github.io/software/api/repos/github/blackrim/phyutility"}, {"uid": "github/bioinfo-center-pasteur-fr/toppred", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-center-pasteur-fr/toppred", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-center-pasteur-fr/toppred"}, {"uid": "github/matthiasfabry/spinOS", "html_url": "https://rseng.github.io/software/repository/github/matthiasfabry/spinOS", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasfabry/spinOS"}, {"uid": "github/Yu606/odyssey", "html_url": "https://rseng.github.io/software/repository/github/Yu606/odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/Yu606/odyssey"}, {"uid": "github/dutilh/CAT", "html_url": "https://rseng.github.io/software/repository/github/dutilh/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/dutilh/CAT"}, {"uid": "github/pec27/hfof", "html_url": "https://rseng.github.io/software/repository/github/pec27/hfof", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/hfof"}, {"uid": "github/pec27/lizard", "html_url": "https://rseng.github.io/software/repository/github/pec27/lizard", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/lizard"}, {"uid": "github/pec27/smerfs", "html_url": "https://rseng.github.io/software/repository/github/pec27/smerfs", "api_url": "https://rseng.github.io/software/api/repos/github/pec27/smerfs"}, {"uid": "github/EskelandLab/ShinyArchRUiO", "html_url": "https://rseng.github.io/software/repository/github/EskelandLab/ShinyArchRUiO", "api_url": "https://rseng.github.io/software/api/repos/github/EskelandLab/ShinyArchRUiO"}, {"uid": "github/alexdaniel654/qlayers", "html_url": "https://rseng.github.io/software/repository/github/alexdaniel654/qlayers", "api_url": "https://rseng.github.io/software/api/repos/github/alexdaniel654/qlayers"}, {"uid": "github/QuackenbushLab/NetworkDataCompanion", "html_url": "https://rseng.github.io/software/repository/github/QuackenbushLab/NetworkDataCompanion", "api_url": "https://rseng.github.io/software/api/repos/github/QuackenbushLab/NetworkDataCompanion"}, {"uid": "github/changliao1025/pyflowline", "html_url": "https://rseng.github.io/software/repository/github/changliao1025/pyflowline", "api_url": "https://rseng.github.io/software/api/repos/github/changliao1025/pyflowline"}, {"uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "html_url": "https://rseng.github.io/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", "api_url": "https://rseng.github.io/software/api/repos/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022"}, {"uid": "github/epiforecasts/covidregionaldata", "html_url": "https://rseng.github.io/software/repository/github/epiforecasts/covidregionaldata", "api_url": "https://rseng.github.io/software/api/repos/github/epiforecasts/covidregionaldata"}, {"uid": "github/an0wen/MARDIGRAS", "html_url": "https://rseng.github.io/software/repository/github/an0wen/MARDIGRAS", "api_url": "https://rseng.github.io/software/api/repos/github/an0wen/MARDIGRAS"}, {"uid": "github/ankilab/EvoVis", "html_url": "https://rseng.github.io/software/repository/github/ankilab/EvoVis", "api_url": "https://rseng.github.io/software/api/repos/github/ankilab/EvoVis"}, {"uid": "github/SoFiA-Admin/SoFiA-2", "html_url": "https://rseng.github.io/software/repository/github/SoFiA-Admin/SoFiA-2", "api_url": "https://rseng.github.io/software/api/repos/github/SoFiA-Admin/SoFiA-2"}, {"uid": "github/bayzidlab/SAINT-Angle", "html_url": "https://rseng.github.io/software/repository/github/bayzidlab/SAINT-Angle", "api_url": "https://rseng.github.io/software/api/repos/github/bayzidlab/SAINT-Angle"}, {"uid": "github/tmux/tmux", "html_url": "https://rseng.github.io/software/repository/github/tmux/tmux", "api_url": "https://rseng.github.io/software/api/repos/github/tmux/tmux"}, {"uid": "github/bbfrederick/stabilitycalc", "html_url": "https://rseng.github.io/software/repository/github/bbfrederick/stabilitycalc", "api_url": "https://rseng.github.io/software/api/repos/github/bbfrederick/stabilitycalc"}, {"uid": "github/dalipconstant/dalip-estimator", "html_url": "https://rseng.github.io/software/repository/github/dalipconstant/dalip-estimator", "api_url": "https://rseng.github.io/software/api/repos/github/dalipconstant/dalip-estimator"}, {"uid": "github/ksahlin/strobealign", "html_url": "https://rseng.github.io/software/repository/github/ksahlin/strobealign", "api_url": "https://rseng.github.io/software/api/repos/github/ksahlin/strobealign"}, {"uid": "github/me-manu/gammaALPs", "html_url": "https://rseng.github.io/software/repository/github/me-manu/gammaALPs", "api_url": "https://rseng.github.io/software/api/repos/github/me-manu/gammaALPs"}, {"uid": "github/mzytnicki/srnaMapper", "html_url": "https://rseng.github.io/software/repository/github/mzytnicki/srnaMapper", "api_url": "https://rseng.github.io/software/api/repos/github/mzytnicki/srnaMapper"}, {"uid": "github/niemasd/CoaTran", "html_url": "https://rseng.github.io/software/repository/github/niemasd/CoaTran", "api_url": "https://rseng.github.io/software/api/repos/github/niemasd/CoaTran"}, {"uid": "github/metagenopolis/CroCoDeEL", "html_url": "https://rseng.github.io/software/repository/github/metagenopolis/CroCoDeEL", "api_url": "https://rseng.github.io/software/api/repos/github/metagenopolis/CroCoDeEL"}, {"uid": "github/ndaniyar/aphot", "html_url": "https://rseng.github.io/software/repository/github/ndaniyar/aphot", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniyar/aphot"}, {"uid": "github/sfarrens/sf_deconvolve", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sf_deconvolve", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sf_deconvolve"}, {"uid": "github/sfarrens/sfof", "html_url": "https://rseng.github.io/software/repository/github/sfarrens/sfof", "api_url": "https://rseng.github.io/software/api/repos/github/sfarrens/sfof"}, {"uid": "github/jteutenberg/downpore", "html_url": "https://rseng.github.io/software/repository/github/jteutenberg/downpore", "api_url": "https://rseng.github.io/software/api/repos/github/jteutenberg/downpore"}, {"uid": "github/HEAP-EXPOSOME/KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/KITE"}, {"uid": "github/HEAP-EXPOSOME/hopsworks-chef", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks-chef"}, {"uid": "github/HEAP-EXPOSOME/hopsworks", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/hopsworks", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/hopsworks"}, {"uid": "github/HEAP-EXPOSOME/metagenomics-ML", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/metagenomics-ML"}, {"uid": "github/HEAP-EXPOSOME/streaming-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/streaming-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/streaming-demo"}, {"uid": "github/HEAP-EXPOSOME/exposome-demo", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/exposome-demo", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/exposome-demo"}, {"uid": "github/HEAP-EXPOSOME/HPV-meta", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-meta", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-meta"}, {"uid": "github/HEAP-EXPOSOME/biopipe", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/biopipe", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/biopipe"}, {"uid": "github/HEAP-EXPOSOME/HPV-KITE", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/HPV-KITE", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/HPV-KITE"}, {"uid": "github/HEAP-EXPOSOME/ConsumerData", "html_url": "https://rseng.github.io/software/repository/github/HEAP-EXPOSOME/ConsumerData", "api_url": "https://rseng.github.io/software/api/repos/github/HEAP-EXPOSOME/ConsumerData"}, {"uid": "github/inesbmartins02/HYMET", "html_url": "https://rseng.github.io/software/repository/github/inesbmartins02/HYMET", "api_url": "https://rseng.github.io/software/api/repos/github/inesbmartins02/HYMET"}, {"uid": "github/paucablop/chemotools", "html_url": "https://rseng.github.io/software/repository/github/paucablop/chemotools", "api_url": "https://rseng.github.io/software/api/repos/github/paucablop/chemotools"}, {"uid": "github/iosefa/PyForestScan", "html_url": "https://rseng.github.io/software/repository/github/iosefa/PyForestScan", "api_url": "https://rseng.github.io/software/api/repos/github/iosefa/PyForestScan"}, {"uid": "github/EvolBioInf/phylonium", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/phylonium", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/phylonium"}, {"uid": "github/EvolBioInf/andi", "html_url": "https://rseng.github.io/software/repository/github/EvolBioInf/andi", "api_url": "https://rseng.github.io/software/api/repos/github/EvolBioInf/andi"}, {"uid": "github/vgl-hub/gfastats", "html_url": "https://rseng.github.io/software/repository/github/vgl-hub/gfastats", "api_url": "https://rseng.github.io/software/api/repos/github/vgl-hub/gfastats"}, {"uid": "github/minkailin/stratsi", "html_url": "https://rseng.github.io/software/repository/github/minkailin/stratsi", "api_url": "https://rseng.github.io/software/api/repos/github/minkailin/stratsi"}, {"uid": "github/eaobservatory/jcmt_coadd", "html_url": "https://rseng.github.io/software/repository/github/eaobservatory/jcmt_coadd", "api_url": "https://rseng.github.io/software/api/repos/github/eaobservatory/jcmt_coadd"}, {"uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole"}, {"uid": "github/eXtremeGravityInstitute/QuickCBC", "html_url": "https://rseng.github.io/software/repository/github/eXtremeGravityInstitute/QuickCBC", "api_url": "https://rseng.github.io/software/api/repos/github/eXtremeGravityInstitute/QuickCBC"}, {"uid": "github/vaexio/vaex", "html_url": "https://rseng.github.io/software/repository/github/vaexio/vaex", "api_url": "https://rseng.github.io/software/api/repos/github/vaexio/vaex"}, {"uid": "github/ARC-OPT/wbc", "html_url": "https://rseng.github.io/software/repository/github/ARC-OPT/wbc", "api_url": "https://rseng.github.io/software/api/repos/github/ARC-OPT/wbc"}, {"uid": "github/Ensembl/WiggleTools", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/WiggleTools", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/WiggleTools"}, {"uid": "github/Ensembl/ensembl-vep", "html_url": "https://rseng.github.io/software/repository/github/Ensembl/ensembl-vep", "api_url": "https://rseng.github.io/software/api/repos/github/Ensembl/ensembl-vep"}, {"uid": "github/HajimeKawahara/sot", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/sot", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/sot"}, {"uid": "github/HajimeKawahara/juwvid", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/juwvid", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/juwvid"}, {"uid": "github/HajimeKawahara/exojax", "html_url": "https://rseng.github.io/software/repository/github/HajimeKawahara/exojax", "api_url": "https://rseng.github.io/software/api/repos/github/HajimeKawahara/exojax"}, {"uid": "github/VasuLab/rgfrosh", "html_url": "https://rseng.github.io/software/repository/github/VasuLab/rgfrosh", "api_url": "https://rseng.github.io/software/api/repos/github/VasuLab/rgfrosh"}, {"uid": "github/cespinosa/pyHIIexplorerV2", "html_url": "https://rseng.github.io/software/repository/github/cespinosa/pyHIIexplorerV2", "api_url": "https://rseng.github.io/software/api/repos/github/cespinosa/pyHIIexplorerV2"}, {"uid": "github/JKoblitz/DSMZCellDive", "html_url": "https://rseng.github.io/software/repository/github/JKoblitz/DSMZCellDive", "api_url": "https://rseng.github.io/software/api/repos/github/JKoblitz/DSMZCellDive"}, {"uid": "github/alesantuz/musclesyneRgies", "html_url": "https://rseng.github.io/software/repository/github/alesantuz/musclesyneRgies", "api_url": "https://rseng.github.io/software/api/repos/github/alesantuz/musclesyneRgies"}, {"uid": "github/SwiftVISA/SwiftVISASwift", "html_url": "https://rseng.github.io/software/repository/github/SwiftVISA/SwiftVISASwift", "api_url": "https://rseng.github.io/software/api/repos/github/SwiftVISA/SwiftVISASwift"}, {"uid": "github/umbramortem/nProFit", "html_url": "https://rseng.github.io/software/repository/github/umbramortem/nProFit", "api_url": "https://rseng.github.io/software/api/repos/github/umbramortem/nProFit"}, {"uid": "github/igvteam/igv-reports", "html_url": "https://rseng.github.io/software/repository/github/igvteam/igv-reports", "api_url": "https://rseng.github.io/software/api/repos/github/igvteam/igv-reports"}, {"uid": "github/expressionanalysis/ea-utils", "html_url": "https://rseng.github.io/software/repository/github/expressionanalysis/ea-utils", "api_url": "https://rseng.github.io/software/api/repos/github/expressionanalysis/ea-utils"}, {"uid": "github/abhisrkckl/GWecc", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/GWecc", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/GWecc"}, {"uid": "github/abhisrkckl/Vela.jl", "html_url": "https://rseng.github.io/software/repository/github/abhisrkckl/Vela.jl", "api_url": "https://rseng.github.io/software/api/repos/github/abhisrkckl/Vela.jl"}, {"uid": "github/Yomguithereal/talisman", "html_url": "https://rseng.github.io/software/repository/github/Yomguithereal/talisman", "api_url": "https://rseng.github.io/software/api/repos/github/Yomguithereal/talisman"}, {"uid": "github/galizia-lab/pyview", "html_url": "https://rseng.github.io/software/repository/github/galizia-lab/pyview", "api_url": "https://rseng.github.io/software/api/repos/github/galizia-lab/pyview"}, {"uid": "github/Kuifje02/vrpy", "html_url": "https://rseng.github.io/software/repository/github/Kuifje02/vrpy", "api_url": "https://rseng.github.io/software/api/repos/github/Kuifje02/vrpy"}, {"uid": "github/alan-turing-institute/Palaeoanalytics", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/Palaeoanalytics", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/Palaeoanalytics"}, {"uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/monitoring-ecosystem-resilience"}, {"uid": "github/alan-turing-institute/setvis", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/setvis", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/setvis"}, {"uid": "github/alan-turing-institute/MLJ.jl", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/MLJ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/MLJ.jl"}, {"uid": "github/alan-turing-institute/autoemulate", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/autoemulate", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/autoemulate"}, {"uid": "github/alan-turing-institute/DetectorChecker", "html_url": "https://rseng.github.io/software/repository/github/alan-turing-institute/DetectorChecker", "api_url": "https://rseng.github.io/software/api/repos/github/alan-turing-institute/DetectorChecker"}, {"uid": "github/standage/AEGeAn", "html_url": "https://rseng.github.io/software/repository/github/standage/AEGeAn", "api_url": "https://rseng.github.io/software/api/repos/github/standage/AEGeAn"}, {"uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", "html_url": "https://rseng.github.io/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", "api_url": "https://rseng.github.io/software/api/repos/github/earth-metabolome-initiative/earth_metabolome_ontology"}, {"uid": "github/eScatter/pyelsepa", "html_url": "https://rseng.github.io/software/repository/github/eScatter/pyelsepa", "api_url": "https://rseng.github.io/software/api/repos/github/eScatter/pyelsepa"}, {"uid": "github/JeremyLezmy/hypergal", "html_url": "https://rseng.github.io/software/repository/github/JeremyLezmy/hypergal", "api_url": "https://rseng.github.io/software/api/repos/github/JeremyLezmy/hypergal"}, {"uid": "github/mariogrs/Simfast21", "html_url": "https://rseng.github.io/software/repository/github/mariogrs/Simfast21", "api_url": "https://rseng.github.io/software/api/repos/github/mariogrs/Simfast21"}, {"uid": "github/Filter-Bubble/stroll", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/stroll", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/stroll"}, {"uid": "github/Filter-Bubble/e2e-Dutch", "html_url": "https://rseng.github.io/software/repository/github/Filter-Bubble/e2e-Dutch", "api_url": "https://rseng.github.io/software/api/repos/github/Filter-Bubble/e2e-Dutch"}, {"uid": "github/goualard-f/MicroFloatingPoints.jl", "html_url": "https://rseng.github.io/software/repository/github/goualard-f/MicroFloatingPoints.jl", "api_url": "https://rseng.github.io/software/api/repos/github/goualard-f/MicroFloatingPoints.jl"}, {"uid": "github/FofanovLab/mtsv_tools", "html_url": "https://rseng.github.io/software/repository/github/FofanovLab/mtsv_tools", "api_url": "https://rseng.github.io/software/api/repos/github/FofanovLab/mtsv_tools"}, {"uid": "github/TheMillerLab/genetex", "html_url": "https://rseng.github.io/software/repository/github/TheMillerLab/genetex", "api_url": "https://rseng.github.io/software/api/repos/github/TheMillerLab/genetex"}, {"uid": "github/cb-geo/mpm", "html_url": "https://rseng.github.io/software/repository/github/cb-geo/mpm", "api_url": "https://rseng.github.io/software/api/repos/github/cb-geo/mpm"}, {"uid": "github/ruanjue/wtdbg2", "html_url": "https://rseng.github.io/software/repository/github/ruanjue/wtdbg2", "api_url": "https://rseng.github.io/software/api/repos/github/ruanjue/wtdbg2"}, {"uid": "github/mikaelLEROY/AxionNS_RayTracing", "html_url": "https://rseng.github.io/software/repository/github/mikaelLEROY/AxionNS_RayTracing", "api_url": "https://rseng.github.io/software/api/repos/github/mikaelLEROY/AxionNS_RayTracing"}, {"uid": "github/mkplummer/Imber", "html_url": "https://rseng.github.io/software/repository/github/mkplummer/Imber", "api_url": "https://rseng.github.io/software/api/repos/github/mkplummer/Imber"}, {"uid": "github/graphnet-team/graphnet", "html_url": "https://rseng.github.io/software/repository/github/graphnet-team/graphnet", "api_url": "https://rseng.github.io/software/api/repos/github/graphnet-team/graphnet"}, {"uid": "github/alchemistry/alchemlyb", "html_url": "https://rseng.github.io/software/repository/github/alchemistry/alchemlyb", "api_url": "https://rseng.github.io/software/api/repos/github/alchemistry/alchemlyb"}, {"uid": "github/temken/DaMaSCUS-SUN", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-SUN", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-SUN"}, {"uid": "github/temken/obscura", "html_url": "https://rseng.github.io/software/repository/github/temken/obscura", "api_url": "https://rseng.github.io/software/api/repos/github/temken/obscura"}, {"uid": "github/temken/DarkARC", "html_url": "https://rseng.github.io/software/repository/github/temken/DarkARC", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DarkARC"}, {"uid": "github/temken/Dirac_vs_Majorana", "html_url": "https://rseng.github.io/software/repository/github/temken/Dirac_vs_Majorana", "api_url": "https://rseng.github.io/software/api/repos/github/temken/Dirac_vs_Majorana"}, {"uid": "github/temken/DaMaSCUS-CRUST", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS-CRUST", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS-CRUST"}, {"uid": "github/temken/DaMaSCUS", "html_url": "https://rseng.github.io/software/repository/github/temken/DaMaSCUS", "api_url": "https://rseng.github.io/software/api/repos/github/temken/DaMaSCUS"}, {"uid": "github/N-Wouda/ALNS", "html_url": "https://rseng.github.io/software/repository/github/N-Wouda/ALNS", "api_url": "https://rseng.github.io/software/api/repos/github/N-Wouda/ALNS"}, {"uid": "github/qtltools/qtltools", "html_url": "https://rseng.github.io/software/repository/github/qtltools/qtltools", "api_url": "https://rseng.github.io/software/api/repos/github/qtltools/qtltools"}, {"uid": "github/lkreidberg/batman", "html_url": "https://rseng.github.io/software/repository/github/lkreidberg/batman", "api_url": "https://rseng.github.io/software/api/repos/github/lkreidberg/batman"}, {"uid": "github/idruglab/hignn", "html_url": "https://rseng.github.io/software/repository/github/idruglab/hignn", "api_url": "https://rseng.github.io/software/api/repos/github/idruglab/hignn"}, {"uid": "github/volkamerlab/opencadd", "html_url": "https://rseng.github.io/software/repository/github/volkamerlab/opencadd", "api_url": "https://rseng.github.io/software/api/repos/github/volkamerlab/opencadd"}, {"uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/LoadProfileGenerator"}, {"uid": "github/FZJ-IEK3-VSA/FINE", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/FINE", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/FINE"}, {"uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "html_url": "https://rseng.github.io/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-IEK3-VSA/ETHOS_PeNALPS"}, {"uid": "github/SCECcode/pycsep", "html_url": "https://rseng.github.io/software/repository/github/SCECcode/pycsep", "api_url": "https://rseng.github.io/software/api/repos/github/SCECcode/pycsep"}, {"uid": "github/mkelley/zchecker", "html_url": "https://rseng.github.io/software/repository/github/mkelley/zchecker", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/zchecker"}, {"uid": "github/mkelley/calviacat", "html_url": "https://rseng.github.io/software/repository/github/mkelley/calviacat", "api_url": "https://rseng.github.io/software/api/repos/github/mkelley/calviacat"}, {"uid": "github/qiime2/q2-vsearch", "html_url": "https://rseng.github.io/software/repository/github/qiime2/q2-vsearch", "api_url": "https://rseng.github.io/software/api/repos/github/qiime2/q2-vsearch"}, {"uid": "github/megbedell/wobble", "html_url": "https://rseng.github.io/software/repository/github/megbedell/wobble", "api_url": "https://rseng.github.io/software/api/repos/github/megbedell/wobble"}, {"uid": "github/bobleesj/cifkit", "html_url": "https://rseng.github.io/software/repository/github/bobleesj/cifkit", "api_url": "https://rseng.github.io/software/api/repos/github/bobleesj/cifkit"}, {"uid": "github/alastair-droop/fqtools", "html_url": "https://rseng.github.io/software/repository/github/alastair-droop/fqtools", "api_url": "https://rseng.github.io/software/api/repos/github/alastair-droop/fqtools"}, {"uid": "github/YuSugihara/MutMap", "html_url": "https://rseng.github.io/software/repository/github/YuSugihara/MutMap", "api_url": "https://rseng.github.io/software/api/repos/github/YuSugihara/MutMap"}, {"uid": "github/ipython/ipython", "html_url": "https://rseng.github.io/software/repository/github/ipython/ipython", "api_url": "https://rseng.github.io/software/api/repos/github/ipython/ipython"}, {"uid": "github/halomod/halomod", "html_url": "https://rseng.github.io/software/repository/github/halomod/halomod", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/halomod"}, {"uid": "github/halomod/hmf", "html_url": "https://rseng.github.io/software/repository/github/halomod/hmf", "api_url": "https://rseng.github.io/software/api/repos/github/halomod/hmf"}, {"uid": "github/OFFIS-DAI/Mango.jl", "html_url": "https://rseng.github.io/software/repository/github/OFFIS-DAI/Mango.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OFFIS-DAI/Mango.jl"}, {"uid": "github/zclaytor/kiauhoku", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/kiauhoku", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/kiauhoku"}, {"uid": "github/zclaytor/butterpy", "html_url": "https://rseng.github.io/software/repository/github/zclaytor/butterpy", "api_url": "https://rseng.github.io/software/api/repos/github/zclaytor/butterpy"}, {"uid": "github/BayraktarLab/cell2location", "html_url": "https://rseng.github.io/software/repository/github/BayraktarLab/cell2location", "api_url": "https://rseng.github.io/software/api/repos/github/BayraktarLab/cell2location"}, {"uid": "github/GaryBAYLOR/mixR", "html_url": "https://rseng.github.io/software/repository/github/GaryBAYLOR/mixR", "api_url": "https://rseng.github.io/software/api/repos/github/GaryBAYLOR/mixR"}, {"uid": "github/unibe-icelab/thz-image-explorer", "html_url": "https://rseng.github.io/software/repository/github/unibe-icelab/thz-image-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/unibe-icelab/thz-image-explorer"}, {"uid": "github/smirarab/pasta", "html_url": "https://rseng.github.io/software/repository/github/smirarab/pasta", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/pasta"}, {"uid": "github/smirarab/sepp", "html_url": "https://rseng.github.io/software/repository/github/smirarab/sepp", "api_url": "https://rseng.github.io/software/api/repos/github/smirarab/sepp"}, {"uid": "github/joshuakt/Oxygen-False-Positives", "html_url": "https://rseng.github.io/software/repository/github/joshuakt/Oxygen-False-Positives", "api_url": "https://rseng.github.io/software/api/repos/github/joshuakt/Oxygen-False-Positives"}, {"uid": "github/gbouras13/plassembler", "html_url": "https://rseng.github.io/software/repository/github/gbouras13/plassembler", "api_url": "https://rseng.github.io/software/api/repos/github/gbouras13/plassembler"}, {"uid": "github/copasi/COPASI", "html_url": "https://rseng.github.io/software/repository/github/copasi/COPASI", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/COPASI"}, {"uid": "github/copasi/basico", "html_url": "https://rseng.github.io/software/repository/github/copasi/basico", "api_url": "https://rseng.github.io/software/api/repos/github/copasi/basico"}, {"uid": "github/ABM4ALL/Melodie", "html_url": "https://rseng.github.io/software/repository/github/ABM4ALL/Melodie", "api_url": "https://rseng.github.io/software/api/repos/github/ABM4ALL/Melodie"}, {"uid": "github/qpv-research-group/solcore5", "html_url": "https://rseng.github.io/software/repository/github/qpv-research-group/solcore5", "api_url": "https://rseng.github.io/software/api/repos/github/qpv-research-group/solcore5"}, {"uid": "github/bauer-alex/fuzzyclara", "html_url": "https://rseng.github.io/software/repository/github/bauer-alex/fuzzyclara", "api_url": "https://rseng.github.io/software/api/repos/github/bauer-alex/fuzzyclara"}, {"uid": "github/tikk3r/lofar-h5plot", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/lofar-h5plot", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/lofar-h5plot"}, {"uid": "github/tikk3r/legacystamps", "html_url": "https://rseng.github.io/software/repository/github/tikk3r/legacystamps", "api_url": "https://rseng.github.io/software/api/repos/github/tikk3r/legacystamps"}, {"uid": "github/ArneTillmann/AuDoLab", "html_url": "https://rseng.github.io/software/repository/github/ArneTillmann/AuDoLab", "api_url": "https://rseng.github.io/software/api/repos/github/ArneTillmann/AuDoLab"}, {"uid": "github/jpmens/jo", "html_url": "https://rseng.github.io/software/repository/github/jpmens/jo", "api_url": "https://rseng.github.io/software/api/repos/github/jpmens/jo"}, {"uid": "github/OP2/PyOP2", "html_url": "https://rseng.github.io/software/repository/github/OP2/PyOP2", "api_url": "https://rseng.github.io/software/api/repos/github/OP2/PyOP2"}, {"uid": "github/epruesse/SINA", "html_url": "https://rseng.github.io/software/repository/github/epruesse/SINA", "api_url": "https://rseng.github.io/software/api/repos/github/epruesse/SINA"}, {"uid": "github/pyccel/pyccel", "html_url": "https://rseng.github.io/software/repository/github/pyccel/pyccel", "api_url": "https://rseng.github.io/software/api/repos/github/pyccel/pyccel"}, {"uid": "github/linqs/psl", "html_url": "https://rseng.github.io/software/repository/github/linqs/psl", "api_url": "https://rseng.github.io/software/api/repos/github/linqs/psl"}, {"uid": "github/ebi-jdispatcher/taxonomy-resolver", "html_url": "https://rseng.github.io/software/repository/github/ebi-jdispatcher/taxonomy-resolver", "api_url": "https://rseng.github.io/software/api/repos/github/ebi-jdispatcher/taxonomy-resolver"}, {"uid": "github/lbcb-sci/graphmap2", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/graphmap2", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/graphmap2"}, {"uid": "github/lbcb-sci/racon", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/racon", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/racon"}, {"uid": "github/lbcb-sci/raven", "html_url": "https://rseng.github.io/software/repository/github/lbcb-sci/raven", "api_url": "https://rseng.github.io/software/api/repos/github/lbcb-sci/raven"}, {"uid": "github/soerendip/ms-mint", "html_url": "https://rseng.github.io/software/repository/github/soerendip/ms-mint", "api_url": "https://rseng.github.io/software/api/repos/github/soerendip/ms-mint"}, {"uid": "github/scikit-hep/vector", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/vector", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/vector"}, {"uid": "github/scikit-hep/pyhf", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/pyhf", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/pyhf"}, {"uid": "github/scikit-hep/iminuit", "html_url": "https://rseng.github.io/software/repository/github/scikit-hep/iminuit", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-hep/iminuit"}, {"uid": "github/AlexandrosAntoniadis/ODUSSEAS", "html_url": "https://rseng.github.io/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", "api_url": "https://rseng.github.io/software/api/repos/github/AlexandrosAntoniadis/ODUSSEAS"}, {"uid": "github/SDXorg/pysd", "html_url": "https://rseng.github.io/software/repository/github/SDXorg/pysd", "api_url": "https://rseng.github.io/software/api/repos/github/SDXorg/pysd"}, {"uid": "github/whybsml/whybsml", "html_url": "https://rseng.github.io/software/repository/github/whybsml/whybsml", "api_url": "https://rseng.github.io/software/api/repos/github/whybsml/whybsml"}, {"uid": "github/Dailer/RCausticMass", "html_url": "https://rseng.github.io/software/repository/github/Dailer/RCausticMass", "api_url": "https://rseng.github.io/software/api/repos/github/Dailer/RCausticMass"}, {"uid": "github/nickhand/pyRSD", "html_url": "https://rseng.github.io/software/repository/github/nickhand/pyRSD", "api_url": "https://rseng.github.io/software/api/repos/github/nickhand/pyRSD"}, {"uid": "github/luntergroup/octopus", "html_url": "https://rseng.github.io/software/repository/github/luntergroup/octopus", "api_url": "https://rseng.github.io/software/api/repos/github/luntergroup/octopus"}, {"uid": "github/SandoghdarLab/PiSCAT", "html_url": "https://rseng.github.io/software/repository/github/SandoghdarLab/PiSCAT", "api_url": "https://rseng.github.io/software/api/repos/github/SandoghdarLab/PiSCAT"}, {"uid": "github/Cadaei-Yuvxvs/OSHy-X", "html_url": "https://rseng.github.io/software/repository/github/Cadaei-Yuvxvs/OSHy-X", "api_url": "https://rseng.github.io/software/api/repos/github/Cadaei-Yuvxvs/OSHy-X"}, {"uid": "github/veragluscevic/dmdd", "html_url": "https://rseng.github.io/software/repository/github/veragluscevic/dmdd", "api_url": "https://rseng.github.io/software/api/repos/github/veragluscevic/dmdd"}, {"uid": "github/chakrah/sage", "html_url": "https://rseng.github.io/software/repository/github/chakrah/sage", "api_url": "https://rseng.github.io/software/api/repos/github/chakrah/sage"}, {"uid": "github/dfki-ric/movement_primitives", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric/movement_primitives", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric/movement_primitives"}, {"uid": "github/LTeinturier/Cloud-Killer-", "html_url": "https://rseng.github.io/software/repository/github/LTeinturier/Cloud-Killer-", "api_url": "https://rseng.github.io/software/api/repos/github/LTeinturier/Cloud-Killer-"}, {"uid": "github/DedalusProject/eigentools", "html_url": "https://rseng.github.io/software/repository/github/DedalusProject/eigentools", "api_url": "https://rseng.github.io/software/api/repos/github/DedalusProject/eigentools"}, {"uid": "github/JieZheng-ShanghaiTech/PiLSL", "html_url": "https://rseng.github.io/software/repository/github/JieZheng-ShanghaiTech/PiLSL", "api_url": "https://rseng.github.io/software/api/repos/github/JieZheng-ShanghaiTech/PiLSL"}, {"uid": "github/etempel/Bisous", "html_url": "https://rseng.github.io/software/repository/github/etempel/Bisous", "api_url": "https://rseng.github.io/software/api/repos/github/etempel/Bisous"}, {"uid": "github/jfarek/xatlas", "html_url": "https://rseng.github.io/software/repository/github/jfarek/xatlas", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/xatlas"}, {"uid": "github/jfarek/alignstats", "html_url": "https://rseng.github.io/software/repository/github/jfarek/alignstats", "api_url": "https://rseng.github.io/software/api/repos/github/jfarek/alignstats"}, {"uid": "github/Nico-Curti/rFBP", "html_url": "https://rseng.github.io/software/repository/github/Nico-Curti/rFBP", "api_url": "https://rseng.github.io/software/api/repos/github/Nico-Curti/rFBP"}, {"uid": "github/fastpm/fastpm", "html_url": "https://rseng.github.io/software/repository/github/fastpm/fastpm", "api_url": "https://rseng.github.io/software/api/repos/github/fastpm/fastpm"}, {"uid": "github/ericfell/rfbzero", "html_url": "https://rseng.github.io/software/repository/github/ericfell/rfbzero", "api_url": "https://rseng.github.io/software/api/repos/github/ericfell/rfbzero"}, {"uid": "github/klebgenomics/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/klebgenomics/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/klebgenomics/Kleborate"}, {"uid": "github/codidact/qpixel", "html_url": "https://rseng.github.io/software/repository/github/codidact/qpixel", "api_url": "https://rseng.github.io/software/api/repos/github/codidact/qpixel"}, {"uid": "github/andreaminio/haplosync", "html_url": "https://rseng.github.io/software/repository/github/andreaminio/haplosync", "api_url": "https://rseng.github.io/software/api/repos/github/andreaminio/haplosync"}, {"uid": "github/ihrke/pypillometry", "html_url": "https://rseng.github.io/software/repository/github/ihrke/pypillometry", "api_url": "https://rseng.github.io/software/api/repos/github/ihrke/pypillometry"}, {"uid": "github/valeriabonapersona/repair", "html_url": "https://rseng.github.io/software/repository/github/valeriabonapersona/repair", "api_url": "https://rseng.github.io/software/api/repos/github/valeriabonapersona/repair"}, {"uid": "github/rgerum/pylustrator", "html_url": "https://rseng.github.io/software/repository/github/rgerum/pylustrator", "api_url": "https://rseng.github.io/software/api/repos/github/rgerum/pylustrator"}, {"uid": "github/benmkent/SparseGridsKit.jl", "html_url": "https://rseng.github.io/software/repository/github/benmkent/SparseGridsKit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/benmkent/SparseGridsKit.jl"}, {"uid": "github/dingyaozhang/Evitar", "html_url": "https://rseng.github.io/software/repository/github/dingyaozhang/Evitar", "api_url": "https://rseng.github.io/software/api/repos/github/dingyaozhang/Evitar"}, {"uid": "github/ryneches/SuchTree", "html_url": "https://rseng.github.io/software/repository/github/ryneches/SuchTree", "api_url": "https://rseng.github.io/software/api/repos/github/ryneches/SuchTree"}, {"uid": "github/ekerrison/RadioSED", "html_url": "https://rseng.github.io/software/repository/github/ekerrison/RadioSED", "api_url": "https://rseng.github.io/software/api/repos/github/ekerrison/RadioSED"}, {"uid": "github/prashjet/popkinmocks", "html_url": "https://rseng.github.io/software/repository/github/prashjet/popkinmocks", "api_url": "https://rseng.github.io/software/api/repos/github/prashjet/popkinmocks"}, {"uid": "github/NVlabs/scene_synthesizer", "html_url": "https://rseng.github.io/software/repository/github/NVlabs/scene_synthesizer", "api_url": "https://rseng.github.io/software/api/repos/github/NVlabs/scene_synthesizer"}, {"uid": "github/geza-kovacs/tran_k2", "html_url": "https://rseng.github.io/software/repository/github/geza-kovacs/tran_k2", "api_url": "https://rseng.github.io/software/api/repos/github/geza-kovacs/tran_k2"}, {"uid": "github/mikecokina/elisa", "html_url": "https://rseng.github.io/software/repository/github/mikecokina/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/mikecokina/elisa"}, {"uid": "github/3D-e-Chem/knime-molviewer", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-molviewer", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-molviewer"}, {"uid": "github/3D-e-Chem/knime-klifs", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-klifs", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-klifs"}, {"uid": "github/3D-e-Chem/knime-silicos-it", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-silicos-it", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-silicos-it"}, {"uid": "github/3D-e-Chem/kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/kripodb"}, {"uid": "github/3D-e-Chem/knime-sstea", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sstea", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sstea"}, {"uid": "github/3D-e-Chem/knime-pharmacophore", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-pharmacophore", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-pharmacophore"}, {"uid": "github/3D-e-Chem/3D-e-Chem-VM", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/3D-e-Chem-VM", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/3D-e-Chem-VM"}, {"uid": "github/3D-e-Chem/sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/sygma"}, {"uid": "github/3D-e-Chem/knime-gpcrdb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-gpcrdb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-gpcrdb"}, {"uid": "github/3D-e-Chem/knime-sygma", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-sygma", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-sygma"}, {"uid": "github/3D-e-Chem/knime-kripodb", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-kripodb", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-kripodb"}, {"uid": "github/3D-e-Chem/knime-python-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-node-archetype"}, {"uid": "github/3D-e-Chem/tycho-knime-node-archetype", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/tycho-knime-node-archetype"}, {"uid": "github/3D-e-Chem/knime-python-wrapper", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-python-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-python-wrapper"}, {"uid": "github/3D-e-Chem/knime-plants", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-plants", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-plants"}, {"uid": "github/3D-e-Chem/knime-testflow", "html_url": "https://rseng.github.io/software/repository/github/3D-e-Chem/knime-testflow", "api_url": "https://rseng.github.io/software/api/repos/github/3D-e-Chem/knime-testflow"}, {"uid": "github/PeterKamphuis/pyFAT-astro", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/pyFAT-astro", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/pyFAT-astro"}, {"uid": "github/PeterKamphuis/FAT", "html_url": "https://rseng.github.io/software/repository/github/PeterKamphuis/FAT", "api_url": "https://rseng.github.io/software/api/repos/github/PeterKamphuis/FAT"}, {"uid": "github/matvii/ADAM", "html_url": "https://rseng.github.io/software/repository/github/matvii/ADAM", "api_url": "https://rseng.github.io/software/api/repos/github/matvii/ADAM"}, {"uid": "github/kostergroup/SIMsalabim", "html_url": "https://rseng.github.io/software/repository/github/kostergroup/SIMsalabim", "api_url": "https://rseng.github.io/software/api/repos/github/kostergroup/SIMsalabim"}, {"uid": "github/open-and-sustainable/prismaid", "html_url": "https://rseng.github.io/software/repository/github/open-and-sustainable/prismaid", "api_url": "https://rseng.github.io/software/api/repos/github/open-and-sustainable/prismaid"}, {"uid": "github/nksaunders/giants", "html_url": "https://rseng.github.io/software/repository/github/nksaunders/giants", "api_url": "https://rseng.github.io/software/api/repos/github/nksaunders/giants"}, {"uid": "github/davidpagnon/Sports2D", "html_url": "https://rseng.github.io/software/repository/github/davidpagnon/Sports2D", "api_url": "https://rseng.github.io/software/api/repos/github/davidpagnon/Sports2D"}, {"uid": "github/icrar/daliuge", "html_url": "https://rseng.github.io/software/repository/github/icrar/daliuge", "api_url": "https://rseng.github.io/software/api/repos/github/icrar/daliuge"}, {"uid": "github/juanaldayparejo/archnemesis-dist", "html_url": "https://rseng.github.io/software/repository/github/juanaldayparejo/archnemesis-dist", "api_url": "https://rseng.github.io/software/api/repos/github/juanaldayparejo/archnemesis-dist"}, {"uid": "github/WentaoZhan1998/geospaNN", "html_url": "https://rseng.github.io/software/repository/github/WentaoZhan1998/geospaNN", "api_url": "https://rseng.github.io/software/api/repos/github/WentaoZhan1998/geospaNN"}, {"uid": "github/njcuk9999/apero-drs", "html_url": "https://rseng.github.io/software/repository/github/njcuk9999/apero-drs", "api_url": "https://rseng.github.io/software/api/repos/github/njcuk9999/apero-drs"}, {"uid": "github/karllark/DIRTY_dustrt", "html_url": "https://rseng.github.io/software/repository/github/karllark/DIRTY_dustrt", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/DIRTY_dustrt"}, {"uid": "github/karllark/dust_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/dust_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/dust_extinction"}, {"uid": "github/karllark/measure_extinction", "html_url": "https://rseng.github.io/software/repository/github/karllark/measure_extinction", "api_url": "https://rseng.github.io/software/api/repos/github/karllark/measure_extinction"}, {"uid": "github/hamidnpc/Neloura", "html_url": "https://rseng.github.io/software/repository/github/hamidnpc/Neloura", "api_url": "https://rseng.github.io/software/api/repos/github/hamidnpc/Neloura"}, {"uid": "github/mpiersonsmela/SeqVerify", "html_url": "https://rseng.github.io/software/repository/github/mpiersonsmela/SeqVerify", "api_url": "https://rseng.github.io/software/api/repos/github/mpiersonsmela/SeqVerify"}, {"uid": "github/kmsurrao/reMASTERed", "html_url": "https://rseng.github.io/software/repository/github/kmsurrao/reMASTERed", "api_url": "https://rseng.github.io/software/api/repos/github/kmsurrao/reMASTERed"}, {"uid": "github/pelican/pelican", "html_url": "https://rseng.github.io/software/repository/github/pelican/pelican", "api_url": "https://rseng.github.io/software/api/repos/github/pelican/pelican"}, {"uid": "github/KeckObservatory/tilsotua", "html_url": "https://rseng.github.io/software/repository/github/KeckObservatory/tilsotua", "api_url": "https://rseng.github.io/software/api/repos/github/KeckObservatory/tilsotua"}, {"uid": "github/csj607/STaRS", "html_url": "https://rseng.github.io/software/repository/github/csj607/STaRS", "api_url": "https://rseng.github.io/software/api/repos/github/csj607/STaRS"}, {"uid": "github/xszhu-lab/AGImpute", "html_url": "https://rseng.github.io/software/repository/github/xszhu-lab/AGImpute", "api_url": "https://rseng.github.io/software/api/repos/github/xszhu-lab/AGImpute"}, {"uid": "github/travisseymour/EPICpy", "html_url": "https://rseng.github.io/software/repository/github/travisseymour/EPICpy", "api_url": "https://rseng.github.io/software/api/repos/github/travisseymour/EPICpy"}, {"uid": "github/lbr-stack/lbr_stack_doc", "html_url": "https://rseng.github.io/software/repository/github/lbr-stack/lbr_stack_doc", "api_url": "https://rseng.github.io/software/api/repos/github/lbr-stack/lbr_stack_doc"}, {"uid": "github/MESAHub/mesa", "html_url": "https://rseng.github.io/software/repository/github/MESAHub/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/MESAHub/mesa"}, {"uid": "github/chrisaberson/BetterReg", "html_url": "https://rseng.github.io/software/repository/github/chrisaberson/BetterReg", "api_url": "https://rseng.github.io/software/api/repos/github/chrisaberson/BetterReg"}, {"uid": "github/Rostlab/ConSurf", "html_url": "https://rseng.github.io/software/repository/github/Rostlab/ConSurf", "api_url": "https://rseng.github.io/software/api/repos/github/Rostlab/ConSurf"}, {"uid": "github/ghislainv/forestatrisk", "html_url": "https://rseng.github.io/software/repository/github/ghislainv/forestatrisk", "api_url": "https://rseng.github.io/software/api/repos/github/ghislainv/forestatrisk"}, {"uid": "github/aboucaud/pypher", "html_url": "https://rseng.github.io/software/repository/github/aboucaud/pypher", "api_url": "https://rseng.github.io/software/api/repos/github/aboucaud/pypher"}, {"uid": "github/radwinskis/RadGEEToolbox", "html_url": "https://rseng.github.io/software/repository/github/radwinskis/RadGEEToolbox", "api_url": "https://rseng.github.io/software/api/repos/github/radwinskis/RadGEEToolbox"}, {"uid": "github/CRG-CNAG/anubis", "html_url": "https://rseng.github.io/software/repository/github/CRG-CNAG/anubis", "api_url": "https://rseng.github.io/software/api/repos/github/CRG-CNAG/anubis"}, {"uid": "github/lxvm/AutoBZ.jl", "html_url": "https://rseng.github.io/software/repository/github/lxvm/AutoBZ.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lxvm/AutoBZ.jl"}, {"uid": "github/milnus/Corekaburra", "html_url": "https://rseng.github.io/software/repository/github/milnus/Corekaburra", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Corekaburra"}, {"uid": "github/milnus/Magphi", "html_url": "https://rseng.github.io/software/repository/github/milnus/Magphi", "api_url": "https://rseng.github.io/software/api/repos/github/milnus/Magphi"}, {"uid": "github/nifty-ppl/nifty", "html_url": "https://rseng.github.io/software/repository/github/nifty-ppl/nifty", "api_url": "https://rseng.github.io/software/api/repos/github/nifty-ppl/nifty"}, {"uid": "github/vdemichev/DiaNN", "html_url": "https://rseng.github.io/software/repository/github/vdemichev/DiaNN", "api_url": "https://rseng.github.io/software/api/repos/github/vdemichev/DiaNN"}, {"uid": "github/mrline/CHIMERA", "html_url": "https://rseng.github.io/software/repository/github/mrline/CHIMERA", "api_url": "https://rseng.github.io/software/api/repos/github/mrline/CHIMERA"}, {"uid": "github/SWE-UniStuttgart/Qlunc", "html_url": "https://rseng.github.io/software/repository/github/SWE-UniStuttgart/Qlunc", "api_url": "https://rseng.github.io/software/api/repos/github/SWE-UniStuttgart/Qlunc"}, {"uid": "github/evanoconnor/GR1D", "html_url": "https://rseng.github.io/software/repository/github/evanoconnor/GR1D", "api_url": "https://rseng.github.io/software/api/repos/github/evanoconnor/GR1D"}, {"uid": "github/VU-IVM/VineCopulas", "html_url": "https://rseng.github.io/software/repository/github/VU-IVM/VineCopulas", "api_url": "https://rseng.github.io/software/api/repos/github/VU-IVM/VineCopulas"}, {"uid": "github/yapenzhang/excalibuhr", "html_url": "https://rseng.github.io/software/repository/github/yapenzhang/excalibuhr", "api_url": "https://rseng.github.io/software/api/repos/github/yapenzhang/excalibuhr"}, {"uid": "github/benlansdell/ethome", "html_url": "https://rseng.github.io/software/repository/github/benlansdell/ethome", "api_url": "https://rseng.github.io/software/api/repos/github/benlansdell/ethome"}, {"uid": "github/insightsengineering/rbmi", "html_url": "https://rseng.github.io/software/repository/github/insightsengineering/rbmi", "api_url": "https://rseng.github.io/software/api/repos/github/insightsengineering/rbmi"}, {"uid": "github/mjuvela/ISM", "html_url": "https://rseng.github.io/software/repository/github/mjuvela/ISM", "api_url": "https://rseng.github.io/software/api/repos/github/mjuvela/ISM"}, {"uid": "github/sebhaan/geobo", "html_url": "https://rseng.github.io/software/repository/github/sebhaan/geobo", "api_url": "https://rseng.github.io/software/api/repos/github/sebhaan/geobo"}, {"uid": "github/flekschas/regl-scatterplot", "html_url": "https://rseng.github.io/software/repository/github/flekschas/regl-scatterplot", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/regl-scatterplot"}, {"uid": "github/flekschas/jupyter-scatter", "html_url": "https://rseng.github.io/software/repository/github/flekschas/jupyter-scatter", "api_url": "https://rseng.github.io/software/api/repos/github/flekschas/jupyter-scatter"}, {"uid": "github/danielreardon/scintools", "html_url": "https://rseng.github.io/software/repository/github/danielreardon/scintools", "api_url": "https://rseng.github.io/software/api/repos/github/danielreardon/scintools"}, {"uid": "github/rferdman/afr", "html_url": "https://rseng.github.io/software/repository/github/rferdman/afr", "api_url": "https://rseng.github.io/software/api/repos/github/rferdman/afr"}, {"uid": "github/PBjam-projects/PBjam", "html_url": "https://rseng.github.io/software/repository/github/PBjam-projects/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/PBjam-projects/PBjam"}, {"uid": "github/Higgins00/TESS-Localize", "html_url": "https://rseng.github.io/software/repository/github/Higgins00/TESS-Localize", "api_url": "https://rseng.github.io/software/api/repos/github/Higgins00/TESS-Localize"}, {"uid": "github/chanzuckerberg/idseq-dag", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/idseq-dag", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/idseq-dag"}, {"uid": "github/chanzuckerberg/cellxgene", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/cellxgene", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/cellxgene"}, {"uid": "github/chanzuckerberg/shasta", "html_url": "https://rseng.github.io/software/repository/github/chanzuckerberg/shasta", "api_url": "https://rseng.github.io/software/api/repos/github/chanzuckerberg/shasta"}, {"uid": "github/GWang2022/iGDP", "html_url": "https://rseng.github.io/software/repository/github/GWang2022/iGDP", "api_url": "https://rseng.github.io/software/api/repos/github/GWang2022/iGDP"}, {"uid": "github/Martinsos/edlib", "html_url": "https://rseng.github.io/software/repository/github/Martinsos/edlib", "api_url": "https://rseng.github.io/software/api/repos/github/Martinsos/edlib"}, {"uid": "github/carronj/plancklens", "html_url": "https://rseng.github.io/software/repository/github/carronj/plancklens", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/plancklens"}, {"uid": "github/carronj/LensIt", "html_url": "https://rseng.github.io/software/repository/github/carronj/LensIt", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/LensIt"}, {"uid": "github/carronj/lenspyx", "html_url": "https://rseng.github.io/software/repository/github/carronj/lenspyx", "api_url": "https://rseng.github.io/software/api/repos/github/carronj/lenspyx"}, {"uid": "github/icredd-cheminfo/CGRdb2", "html_url": "https://rseng.github.io/software/repository/github/icredd-cheminfo/CGRdb2", "api_url": "https://rseng.github.io/software/api/repos/github/icredd-cheminfo/CGRdb2"}, {"uid": "github/introlab/opentera", "html_url": "https://rseng.github.io/software/repository/github/introlab/opentera", "api_url": "https://rseng.github.io/software/api/repos/github/introlab/opentera"}, {"uid": "github/cdfortenbach/JET", "html_url": "https://rseng.github.io/software/repository/github/cdfortenbach/JET", "api_url": "https://rseng.github.io/software/api/repos/github/cdfortenbach/JET"}, {"uid": "github/Mulan-94/smops", "html_url": "https://rseng.github.io/software/repository/github/Mulan-94/smops", "api_url": "https://rseng.github.io/software/api/repos/github/Mulan-94/smops"}, {"uid": "github/efpl-columbia/PointClouds.jl", "html_url": "https://rseng.github.io/software/repository/github/efpl-columbia/PointClouds.jl", "api_url": "https://rseng.github.io/software/api/repos/github/efpl-columbia/PointClouds.jl"}, {"uid": "github/paulmorio/gincco", "html_url": "https://rseng.github.io/software/repository/github/paulmorio/gincco", "api_url": "https://rseng.github.io/software/api/repos/github/paulmorio/gincco"}, {"uid": "github/jls713/tact", "html_url": "https://rseng.github.io/software/repository/github/jls713/tact", "api_url": "https://rseng.github.io/software/api/repos/github/jls713/tact"}, {"uid": "github/dgrun/FateID", "html_url": "https://rseng.github.io/software/repository/github/dgrun/FateID", "api_url": "https://rseng.github.io/software/api/repos/github/dgrun/FateID"}, {"uid": "github/mphowardlab/lammpsio", "html_url": "https://rseng.github.io/software/repository/github/mphowardlab/lammpsio", "api_url": "https://rseng.github.io/software/api/repos/github/mphowardlab/lammpsio"}, {"uid": "github/muzafferarikan/gNOMO2", "html_url": "https://rseng.github.io/software/repository/github/muzafferarikan/gNOMO2", "api_url": "https://rseng.github.io/software/api/repos/github/muzafferarikan/gNOMO2"}, {"uid": "github/csuhjhjhj/GCNCMI", "html_url": "https://rseng.github.io/software/repository/github/csuhjhjhj/GCNCMI", "api_url": "https://rseng.github.io/software/api/repos/github/csuhjhjhj/GCNCMI"}, {"uid": "github/cedrus-opensource/pyxid", "html_url": "https://rseng.github.io/software/repository/github/cedrus-opensource/pyxid", "api_url": "https://rseng.github.io/software/api/repos/github/cedrus-opensource/pyxid"}, {"uid": "github/varchasgopalaswamy/AutoUncertainties", "html_url": "https://rseng.github.io/software/repository/github/varchasgopalaswamy/AutoUncertainties", "api_url": "https://rseng.github.io/software/api/repos/github/varchasgopalaswamy/AutoUncertainties"}, {"uid": "github/tonhingm/PHOTOe-v1", "html_url": "https://rseng.github.io/software/repository/github/tonhingm/PHOTOe-v1", "api_url": "https://rseng.github.io/software/api/repos/github/tonhingm/PHOTOe-v1"}, {"uid": "github/revoltek/losoto", "html_url": "https://rseng.github.io/software/repository/github/revoltek/losoto", "api_url": "https://rseng.github.io/software/api/repos/github/revoltek/losoto"}, {"uid": "github/mrteetoe/HOI", "html_url": "https://rseng.github.io/software/repository/github/mrteetoe/HOI", "api_url": "https://rseng.github.io/software/api/repos/github/mrteetoe/HOI"}, {"uid": "github/gourabghoshroy/MPVNN", "html_url": "https://rseng.github.io/software/repository/github/gourabghoshroy/MPVNN", "api_url": "https://rseng.github.io/software/api/repos/github/gourabghoshroy/MPVNN"}, {"uid": "github/rroyaute/h2_breeders_equation", "html_url": "https://rseng.github.io/software/repository/github/rroyaute/h2_breeders_equation", "api_url": "https://rseng.github.io/software/api/repos/github/rroyaute/h2_breeders_equation"}, {"uid": "github/franciscovillaescusa/Pylians3", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians3", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians3"}, {"uid": "github/franciscovillaescusa/Pylians", "html_url": "https://rseng.github.io/software/repository/github/franciscovillaescusa/Pylians", "api_url": "https://rseng.github.io/software/api/repos/github/franciscovillaescusa/Pylians"}, {"uid": "github/gxiaolab/scAllele", "html_url": "https://rseng.github.io/software/repository/github/gxiaolab/scAllele", "api_url": "https://rseng.github.io/software/api/repos/github/gxiaolab/scAllele"}, {"uid": "github/moritzobenauer/ProjectRaccoon", "html_url": "https://rseng.github.io/software/repository/github/moritzobenauer/ProjectRaccoon", "api_url": "https://rseng.github.io/software/api/repos/github/moritzobenauer/ProjectRaccoon"}, {"uid": "github/seamplex/feenox", "html_url": "https://rseng.github.io/software/repository/github/seamplex/feenox", "api_url": "https://rseng.github.io/software/api/repos/github/seamplex/feenox"}, {"uid": "github/solislemuslab/minaa", "html_url": "https://rseng.github.io/software/repository/github/solislemuslab/minaa", "api_url": "https://rseng.github.io/software/api/repos/github/solislemuslab/minaa"}, {"uid": "github/openmsr/CAD_to_OpenMC", "html_url": "https://rseng.github.io/software/repository/github/openmsr/CAD_to_OpenMC", "api_url": "https://rseng.github.io/software/api/repos/github/openmsr/CAD_to_OpenMC"}, {"uid": "github/hopr-framework/PyHOPE", "html_url": "https://rseng.github.io/software/repository/github/hopr-framework/PyHOPE", "api_url": "https://rseng.github.io/software/api/repos/github/hopr-framework/PyHOPE"}, {"uid": "github/lysovosyl/NanoDeep", "html_url": "https://rseng.github.io/software/repository/github/lysovosyl/NanoDeep", "api_url": "https://rseng.github.io/software/api/repos/github/lysovosyl/NanoDeep"}, {"uid": "github/arnikz/PIQMIe", "html_url": "https://rseng.github.io/software/repository/github/arnikz/PIQMIe", "api_url": "https://rseng.github.io/software/api/repos/github/arnikz/PIQMIe"}, {"uid": "github/viash-io/viash", "html_url": "https://rseng.github.io/software/repository/github/viash-io/viash", "api_url": "https://rseng.github.io/software/api/repos/github/viash-io/viash"}, {"uid": "github/olivares-j/Kalkayotl", "html_url": "https://rseng.github.io/software/repository/github/olivares-j/Kalkayotl", "api_url": "https://rseng.github.io/software/api/repos/github/olivares-j/Kalkayotl"}, {"uid": "github/fulcrumgenomics/fgbio", "html_url": "https://rseng.github.io/software/repository/github/fulcrumgenomics/fgbio", "api_url": "https://rseng.github.io/software/api/repos/github/fulcrumgenomics/fgbio"}, {"uid": "github/openjournals/joss", "html_url": "https://rseng.github.io/software/repository/github/openjournals/joss", "api_url": "https://rseng.github.io/software/api/repos/github/openjournals/joss"}, {"uid": "github/astroferreira/galclean", "html_url": "https://rseng.github.io/software/repository/github/astroferreira/galclean", "api_url": "https://rseng.github.io/software/api/repos/github/astroferreira/galclean"}, {"uid": "github/reality/klarigi", "html_url": "https://rseng.github.io/software/repository/github/reality/klarigi", "api_url": "https://rseng.github.io/software/api/repos/github/reality/klarigi"}, {"uid": "github/mp3guy/ElasticFusion", "html_url": "https://rseng.github.io/software/repository/github/mp3guy/ElasticFusion", "api_url": "https://rseng.github.io/software/api/repos/github/mp3guy/ElasticFusion"}, {"uid": "github/brettc/partitionfinder", "html_url": "https://rseng.github.io/software/repository/github/brettc/partitionfinder", "api_url": "https://rseng.github.io/software/api/repos/github/brettc/partitionfinder"}, {"uid": "github/NielsenBerkeleyLab/sconce", "html_url": "https://rseng.github.io/software/repository/github/NielsenBerkeleyLab/sconce", "api_url": "https://rseng.github.io/software/api/repos/github/NielsenBerkeleyLab/sconce"}, {"uid": "github/NoahSailer/FishLSS", "html_url": "https://rseng.github.io/software/repository/github/NoahSailer/FishLSS", "api_url": "https://rseng.github.io/software/api/repos/github/NoahSailer/FishLSS"}, {"uid": "github/bfarr/kombine", "html_url": "https://rseng.github.io/software/repository/github/bfarr/kombine", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/kombine"}, {"uid": "github/bfarr/exocartographer", "html_url": "https://rseng.github.io/software/repository/github/bfarr/exocartographer", "api_url": "https://rseng.github.io/software/api/repos/github/bfarr/exocartographer"}, {"uid": "github/gridap/GridapSolvers.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/GridapSolvers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/GridapSolvers.jl"}, {"uid": "github/gridap/Gridap.jl", "html_url": "https://rseng.github.io/software/repository/github/gridap/Gridap.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gridap/Gridap.jl"}, {"uid": "github/tbronzwaer/raptor", "html_url": "https://rseng.github.io/software/repository/github/tbronzwaer/raptor", "api_url": "https://rseng.github.io/software/api/repos/github/tbronzwaer/raptor"}, {"uid": "github/CosmoLike/CosmoCov", "html_url": "https://rseng.github.io/software/repository/github/CosmoLike/CosmoCov", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoLike/CosmoCov"}, {"uid": "github/tortellini-tools/action", "html_url": "https://rseng.github.io/software/repository/github/tortellini-tools/action", "api_url": "https://rseng.github.io/software/api/repos/github/tortellini-tools/action"}, {"uid": "github/OPM/opm-simulators", "html_url": "https://rseng.github.io/software/repository/github/OPM/opm-simulators", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/opm-simulators"}, {"uid": "github/OPM/pyopmspe11", "html_url": "https://rseng.github.io/software/repository/github/OPM/pyopmspe11", "api_url": "https://rseng.github.io/software/api/repos/github/OPM/pyopmspe11"}, {"uid": "github/statOmics/tradeSeqPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/tradeSeqPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/tradeSeqPaper"}, {"uid": "github/statOmics/satuRnPaper", "html_url": "https://rseng.github.io/software/repository/github/statOmics/satuRnPaper", "api_url": "https://rseng.github.io/software/api/repos/github/statOmics/satuRnPaper"}, {"uid": "github/mmann1123/xr_fresh", "html_url": "https://rseng.github.io/software/repository/github/mmann1123/xr_fresh", "api_url": "https://rseng.github.io/software/api/repos/github/mmann1123/xr_fresh"}, {"uid": "github/epigenelabs/inmoose", "html_url": "https://rseng.github.io/software/repository/github/epigenelabs/inmoose", "api_url": "https://rseng.github.io/software/api/repos/github/epigenelabs/inmoose"}, {"uid": "github/SimCab-CHU/ifCNVR", "html_url": "https://rseng.github.io/software/repository/github/SimCab-CHU/ifCNVR", "api_url": "https://rseng.github.io/software/api/repos/github/SimCab-CHU/ifCNVR"}, {"uid": "github/ggonnella/gfapy", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/gfapy", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/gfapy"}, {"uid": "github/ggonnella/fastsubtrees", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/fastsubtrees", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/fastsubtrees"}, {"uid": "github/ggonnella/rgfa", "html_url": "https://rseng.github.io/software/repository/github/ggonnella/rgfa", "api_url": "https://rseng.github.io/software/api/repos/github/ggonnella/rgfa"}, {"uid": "github/sapearson/HSS", "html_url": "https://rseng.github.io/software/repository/github/sapearson/HSS", "api_url": "https://rseng.github.io/software/api/repos/github/sapearson/HSS"}, {"uid": "github/hposborn/MonoTools", "html_url": "https://rseng.github.io/software/repository/github/hposborn/MonoTools", "api_url": "https://rseng.github.io/software/api/repos/github/hposborn/MonoTools"}, {"uid": "github/Baohua-Chen/GFFx", "html_url": "https://rseng.github.io/software/repository/github/Baohua-Chen/GFFx", "api_url": "https://rseng.github.io/software/api/repos/github/Baohua-Chen/GFFx"}, {"uid": "github/lh3/bfc", "html_url": "https://rseng.github.io/software/repository/github/lh3/bfc", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bfc"}, {"uid": "github/lh3/bgt", "html_url": "https://rseng.github.io/software/repository/github/lh3/bgt", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bgt"}, {"uid": "github/lh3/wgsim", "html_url": "https://rseng.github.io/software/repository/github/lh3/wgsim", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/wgsim"}, {"uid": "github/lh3/fermi-lite", "html_url": "https://rseng.github.io/software/repository/github/lh3/fermi-lite", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/fermi-lite"}, {"uid": "github/lh3/bedtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bedtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bedtk"}, {"uid": "github/lh3/miniasm", "html_url": "https://rseng.github.io/software/repository/github/lh3/miniasm", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/miniasm"}, {"uid": "github/lh3/minimap2", "html_url": "https://rseng.github.io/software/repository/github/lh3/minimap2", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/minimap2"}, {"uid": "github/lh3/bioawk", "html_url": "https://rseng.github.io/software/repository/github/lh3/bioawk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/bioawk"}, {"uid": "github/lh3/seqtk", "html_url": "https://rseng.github.io/software/repository/github/lh3/seqtk", "api_url": "https://rseng.github.io/software/api/repos/github/lh3/seqtk"}, {"uid": "github/SwissClinicalTrialOrganisation/secuTrialR", "html_url": "https://rseng.github.io/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", "api_url": "https://rseng.github.io/software/api/repos/github/SwissClinicalTrialOrganisation/secuTrialR"}, {"uid": "github/csdms/bmi", "html_url": "https://rseng.github.io/software/repository/github/csdms/bmi", "api_url": "https://rseng.github.io/software/api/repos/github/csdms/bmi"}, {"uid": "github/DeepRank/iScore", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/iScore", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/iScore"}, {"uid": "github/DeepRank/pssmgen", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pssmgen", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pssmgen"}, {"uid": "github/DeepRank/pdb2sql", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/pdb2sql", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/pdb2sql"}, {"uid": "github/DeepRank/deeprank-core", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank-core", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank-core"}, {"uid": "github/DeepRank/DeepRank-GNN", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/DeepRank-GNN", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/DeepRank-GNN"}, {"uid": "github/DeepRank/deeprank", "html_url": "https://rseng.github.io/software/repository/github/DeepRank/deeprank", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRank/deeprank"}, {"uid": "github/vmplacco/linemake", "html_url": "https://rseng.github.io/software/repository/github/vmplacco/linemake", "api_url": "https://rseng.github.io/software/api/repos/github/vmplacco/linemake"}, {"uid": "github/yupidevs/pactus", "html_url": "https://rseng.github.io/software/repository/github/yupidevs/pactus", "api_url": "https://rseng.github.io/software/api/repos/github/yupidevs/pactus"}, {"uid": "github/GRTLCollaboration/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRFolres"}, {"uid": "github/GRTLCollaboration/GRTresna", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRTresna", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRTresna"}, {"uid": "github/GRTLCollaboration/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRChombo"}, {"uid": "github/GRTLCollaboration/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRTLCollaboration/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRTLCollaboration/GRDzhadzha"}, {"uid": "github/watts-dev/watts", "html_url": "https://rseng.github.io/software/repository/github/watts-dev/watts", "api_url": "https://rseng.github.io/software/api/repos/github/watts-dev/watts"}, {"uid": "github/natelust/least_asymmetry", "html_url": "https://rseng.github.io/software/repository/github/natelust/least_asymmetry", "api_url": "https://rseng.github.io/software/api/repos/github/natelust/least_asymmetry"}, {"uid": "github/petigura/terra", "html_url": "https://rseng.github.io/software/repository/github/petigura/terra", "api_url": "https://rseng.github.io/software/api/repos/github/petigura/terra"}, {"uid": "github/newcleo-dev-team/lbh15", "html_url": "https://rseng.github.io/software/repository/github/newcleo-dev-team/lbh15", "api_url": "https://rseng.github.io/software/api/repos/github/newcleo-dev-team/lbh15"}, {"uid": "github/rqtl/qtl2", "html_url": "https://rseng.github.io/software/repository/github/rqtl/qtl2", "api_url": "https://rseng.github.io/software/api/repos/github/rqtl/qtl2"}, {"uid": "github/paulhjkelly/taskgraph-metaprogramming", "html_url": "https://rseng.github.io/software/repository/github/paulhjkelly/taskgraph-metaprogramming", "api_url": "https://rseng.github.io/software/api/repos/github/paulhjkelly/taskgraph-metaprogramming"}, {"uid": "github/neurogeriatricskiel/NGMT", "html_url": "https://rseng.github.io/software/repository/github/neurogeriatricskiel/NGMT", "api_url": "https://rseng.github.io/software/api/repos/github/neurogeriatricskiel/NGMT"}, {"uid": "github/russelllab/wesa", "html_url": "https://rseng.github.io/software/repository/github/russelllab/wesa", "api_url": "https://rseng.github.io/software/api/repos/github/russelllab/wesa"}, {"uid": "github/nilearn/nilearnhub.io", "html_url": "https://rseng.github.io/software/repository/github/nilearn/nilearnhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/nilearn/nilearnhub.io"}, {"uid": "github/miracum/ahd2fhir", "html_url": "https://rseng.github.io/software/repository/github/miracum/ahd2fhir", "api_url": "https://rseng.github.io/software/api/repos/github/miracum/ahd2fhir"}, {"uid": "github/ppmim/PAPI4K", "html_url": "https://rseng.github.io/software/repository/github/ppmim/PAPI4K", "api_url": "https://rseng.github.io/software/api/repos/github/ppmim/PAPI4K"}, {"uid": "github/drcandacemakedamoore/cleanX", "html_url": "https://rseng.github.io/software/repository/github/drcandacemakedamoore/cleanX", "api_url": "https://rseng.github.io/software/api/repos/github/drcandacemakedamoore/cleanX"}, {"uid": "github/rhysf/HaplotypeTools", "html_url": "https://rseng.github.io/software/repository/github/rhysf/HaplotypeTools", "api_url": "https://rseng.github.io/software/api/repos/github/rhysf/HaplotypeTools"}, {"uid": "github/jhparkastro/gpcal", "html_url": "https://rseng.github.io/software/repository/github/jhparkastro/gpcal", "api_url": "https://rseng.github.io/software/api/repos/github/jhparkastro/gpcal"}, {"uid": "github/mwaskom/seaborn", "html_url": "https://rseng.github.io/software/repository/github/mwaskom/seaborn", "api_url": "https://rseng.github.io/software/api/repos/github/mwaskom/seaborn"}, {"uid": "github/V-Bernal/GeneNetTools", "html_url": "https://rseng.github.io/software/repository/github/V-Bernal/GeneNetTools", "api_url": "https://rseng.github.io/software/api/repos/github/V-Bernal/GeneNetTools"}, {"uid": "github/BioGearsEngine/core", "html_url": "https://rseng.github.io/software/repository/github/BioGearsEngine/core", "api_url": "https://rseng.github.io/software/api/repos/github/BioGearsEngine/core"}, {"uid": "github/tomasstolker/pycrires", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/pycrires", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/pycrires"}, {"uid": "github/tomasstolker/ARTES", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/ARTES", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/ARTES"}, {"uid": "github/tomasstolker/species", "html_url": "https://rseng.github.io/software/repository/github/tomasstolker/species", "api_url": "https://rseng.github.io/software/api/repos/github/tomasstolker/species"}, {"uid": "github/rrwick/Filtlong", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Filtlong", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Filtlong"}, {"uid": "github/rrwick/Unicycler", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Unicycler", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Unicycler"}, {"uid": "github/rrwick/Deepbinner", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Deepbinner", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Deepbinner"}, {"uid": "github/rrwick/Porechop", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Porechop", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Porechop"}, {"uid": "github/rrwick/Bandage", "html_url": "https://rseng.github.io/software/repository/github/rrwick/Bandage", "api_url": "https://rseng.github.io/software/api/repos/github/rrwick/Bandage"}, {"uid": "github/simonprovost/scikit-longitudinal", "html_url": "https://rseng.github.io/software/repository/github/simonprovost/scikit-longitudinal", "api_url": "https://rseng.github.io/software/api/repos/github/simonprovost/scikit-longitudinal"}, {"uid": "github/astroboylrx/Rubble", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/Rubble", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/Rubble"}, {"uid": "github/astroboylrx/PLAN", "html_url": "https://rseng.github.io/software/repository/github/astroboylrx/PLAN", "api_url": "https://rseng.github.io/software/api/repos/github/astroboylrx/PLAN"}, {"uid": "github/atomec-project/atoMEC", "html_url": "https://rseng.github.io/software/repository/github/atomec-project/atoMEC", "api_url": "https://rseng.github.io/software/api/repos/github/atomec-project/atoMEC"}, {"uid": "github/QibangLiu/PDLSM-FEM_mpi", "html_url": "https://rseng.github.io/software/repository/github/QibangLiu/PDLSM-FEM_mpi", "api_url": "https://rseng.github.io/software/api/repos/github/QibangLiu/PDLSM-FEM_mpi"}, {"uid": "github/medvedevgroup/TwoPaCo", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/TwoPaCo", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/TwoPaCo"}, {"uid": "github/medvedevgroup/varmatch", "html_url": "https://rseng.github.io/software/repository/github/medvedevgroup/varmatch", "api_url": "https://rseng.github.io/software/api/repos/github/medvedevgroup/varmatch"}, {"uid": "github/simonehagey/orbdot", "html_url": "https://rseng.github.io/software/repository/github/simonehagey/orbdot", "api_url": "https://rseng.github.io/software/api/repos/github/simonehagey/orbdot"}, {"uid": "github/GammaCascade/GCascade", "html_url": "https://rseng.github.io/software/repository/github/GammaCascade/GCascade", "api_url": "https://rseng.github.io/software/api/repos/github/GammaCascade/GCascade"}, {"uid": "github/JuliaHelmecke/MetaboMAPS", "html_url": "https://rseng.github.io/software/repository/github/JuliaHelmecke/MetaboMAPS", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHelmecke/MetaboMAPS"}, {"uid": "github/ebellm/pyraf-dbsp", "html_url": "https://rseng.github.io/software/repository/github/ebellm/pyraf-dbsp", "api_url": "https://rseng.github.io/software/api/repos/github/ebellm/pyraf-dbsp"}, {"uid": "github/felixbur/nkululeko", "html_url": "https://rseng.github.io/software/repository/github/felixbur/nkululeko", "api_url": "https://rseng.github.io/software/api/repos/github/felixbur/nkululeko"}, {"uid": "github/Ambuj-UF/APOP", "html_url": "https://rseng.github.io/software/repository/github/Ambuj-UF/APOP", "api_url": "https://rseng.github.io/software/api/repos/github/Ambuj-UF/APOP"}, {"uid": "github/marcelauliano/MitoHiFi", "html_url": "https://rseng.github.io/software/repository/github/marcelauliano/MitoHiFi", "api_url": "https://rseng.github.io/software/api/repos/github/marcelauliano/MitoHiFi"}, {"uid": "github/gwastro/pycbc", "html_url": "https://rseng.github.io/software/repository/github/gwastro/pycbc", "api_url": "https://rseng.github.io/software/api/repos/github/gwastro/pycbc"}, {"uid": "github/ArgoCanada/argodata", "html_url": "https://rseng.github.io/software/repository/github/ArgoCanada/argodata", "api_url": "https://rseng.github.io/software/api/repos/github/ArgoCanada/argodata"}, {"uid": "github/sinanozaydin/pide", "html_url": "https://rseng.github.io/software/repository/github/sinanozaydin/pide", "api_url": "https://rseng.github.io/software/api/repos/github/sinanozaydin/pide"}, {"uid": "github/mpi4py/shmem4py", "html_url": "https://rseng.github.io/software/repository/github/mpi4py/shmem4py", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4py/shmem4py"}, {"uid": "github/InsightSoftwareConsortium/ITK", "html_url": "https://rseng.github.io/software/repository/github/InsightSoftwareConsortium/ITK", "api_url": "https://rseng.github.io/software/api/repos/github/InsightSoftwareConsortium/ITK"}, {"uid": "github/dolfin-adjoint/pyadjoint", "html_url": "https://rseng.github.io/software/repository/github/dolfin-adjoint/pyadjoint", "api_url": "https://rseng.github.io/software/api/repos/github/dolfin-adjoint/pyadjoint"}, {"uid": "github/ggciag/mandyoc", "html_url": "https://rseng.github.io/software/repository/github/ggciag/mandyoc", "api_url": "https://rseng.github.io/software/api/repos/github/ggciag/mandyoc"}, {"uid": "github/afeinstein20/stella", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/stella", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/stella"}, {"uid": "github/afeinstein20/eleanor", "html_url": "https://rseng.github.io/software/repository/github/afeinstein20/eleanor", "api_url": "https://rseng.github.io/software/api/repos/github/afeinstein20/eleanor"}, {"uid": "github/AutoResearch/sweetbean", "html_url": "https://rseng.github.io/software/repository/github/AutoResearch/sweetbean", "api_url": "https://rseng.github.io/software/api/repos/github/AutoResearch/sweetbean"}, {"uid": "github/cloudflex-project/cloudflex", "html_url": "https://rseng.github.io/software/repository/github/cloudflex-project/cloudflex", "api_url": "https://rseng.github.io/software/api/repos/github/cloudflex-project/cloudflex"}, {"uid": "github/daler/pybedtools", "html_url": "https://rseng.github.io/software/repository/github/daler/pybedtools", "api_url": "https://rseng.github.io/software/api/repos/github/daler/pybedtools"}, {"uid": "github/daler/gffutils", "html_url": "https://rseng.github.io/software/repository/github/daler/gffutils", "api_url": "https://rseng.github.io/software/api/repos/github/daler/gffutils"}, {"uid": "github/zheng-lh/UBER", "html_url": "https://rseng.github.io/software/repository/github/zheng-lh/UBER", "api_url": "https://rseng.github.io/software/api/repos/github/zheng-lh/UBER"}, {"uid": "github/twosixlabs/magicwand-datatool", "html_url": "https://rseng.github.io/software/repository/github/twosixlabs/magicwand-datatool", "api_url": "https://rseng.github.io/software/api/repos/github/twosixlabs/magicwand-datatool"}, {"uid": "github/justinmathias/isocalcR", "html_url": "https://rseng.github.io/software/repository/github/justinmathias/isocalcR", "api_url": "https://rseng.github.io/software/api/repos/github/justinmathias/isocalcR"}, {"uid": "github/asmusskar/ALVA", "html_url": "https://rseng.github.io/software/repository/github/asmusskar/ALVA", "api_url": "https://rseng.github.io/software/api/repos/github/asmusskar/ALVA"}, {"uid": "github/JonasRieger/ldaPrototype", "html_url": "https://rseng.github.io/software/repository/github/JonasRieger/ldaPrototype", "api_url": "https://rseng.github.io/software/api/repos/github/JonasRieger/ldaPrototype"}, {"uid": "github/Patrick-Cole/pygmi", "html_url": "https://rseng.github.io/software/repository/github/Patrick-Cole/pygmi", "api_url": "https://rseng.github.io/software/api/repos/github/Patrick-Cole/pygmi"}, {"uid": "github/supernnova/SuperNNova", "html_url": "https://rseng.github.io/software/repository/github/supernnova/SuperNNova", "api_url": "https://rseng.github.io/software/api/repos/github/supernnova/SuperNNova"}, {"uid": "github/pixixiaonaogou/MLSDR", "html_url": "https://rseng.github.io/software/repository/github/pixixiaonaogou/MLSDR", "api_url": "https://rseng.github.io/software/api/repos/github/pixixiaonaogou/MLSDR"}, {"uid": "github/abs2k12/COCOA", "html_url": "https://rseng.github.io/software/repository/github/abs2k12/COCOA", "api_url": "https://rseng.github.io/software/api/repos/github/abs2k12/COCOA"}, {"uid": "github/nitadori/SCF-FDPS", "html_url": "https://rseng.github.io/software/repository/github/nitadori/SCF-FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/nitadori/SCF-FDPS"}, {"uid": "github/tomoyukif/MCPtaggR", "html_url": "https://rseng.github.io/software/repository/github/tomoyukif/MCPtaggR", "api_url": "https://rseng.github.io/software/api/repos/github/tomoyukif/MCPtaggR"}, {"uid": "github/AA-ALERT/frbcatdb", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcatdb", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcatdb"}, {"uid": "github/AA-ALERT/AMBER", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AMBER"}, {"uid": "github/AA-ALERT/Dedispersion", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/Dedispersion", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/Dedispersion"}, {"uid": "github/AA-ALERT/AstroData", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/AstroData", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/AstroData"}, {"uid": "github/AA-ALERT/frbcat-web", "html_url": "https://rseng.github.io/software/repository/github/AA-ALERT/frbcat-web", "api_url": "https://rseng.github.io/software/api/repos/github/AA-ALERT/frbcat-web"}, {"uid": "github/rossfadely/star-galaxy-classification", "html_url": "https://rseng.github.io/software/repository/github/rossfadely/star-galaxy-classification", "api_url": "https://rseng.github.io/software/api/repos/github/rossfadely/star-galaxy-classification"}, {"uid": "github/BitSeq/BitSeq", "html_url": "https://rseng.github.io/software/repository/github/BitSeq/BitSeq", "api_url": "https://rseng.github.io/software/api/repos/github/BitSeq/BitSeq"}, {"uid": "github/domenico-simone/rmlst_api", "html_url": "https://rseng.github.io/software/repository/github/domenico-simone/rmlst_api", "api_url": "https://rseng.github.io/software/api/repos/github/domenico-simone/rmlst_api"}, {"uid": "github/Parsl/parsl", "html_url": "https://rseng.github.io/software/repository/github/Parsl/parsl", "api_url": "https://rseng.github.io/software/api/repos/github/Parsl/parsl"}, {"uid": "github/PyLops/pylops-mpi", "html_url": "https://rseng.github.io/software/repository/github/PyLops/pylops-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/PyLops/pylops-mpi"}, {"uid": "github/jmcbroome/BTE", "html_url": "https://rseng.github.io/software/repository/github/jmcbroome/BTE", "api_url": "https://rseng.github.io/software/api/repos/github/jmcbroome/BTE"}, {"uid": "github/dbuscher/pois", "html_url": "https://rseng.github.io/software/repository/github/dbuscher/pois", "api_url": "https://rseng.github.io/software/api/repos/github/dbuscher/pois"}, {"uid": "github/devanshkv/fetch", "html_url": "https://rseng.github.io/software/repository/github/devanshkv/fetch", "api_url": "https://rseng.github.io/software/api/repos/github/devanshkv/fetch"}, {"uid": "github/SchlossLab/mikropml", "html_url": "https://rseng.github.io/software/repository/github/SchlossLab/mikropml", "api_url": "https://rseng.github.io/software/api/repos/github/SchlossLab/mikropml"}, {"uid": "github/Single-Cell-Graph-Learning/scSGL", "html_url": "https://rseng.github.io/software/repository/github/Single-Cell-Graph-Learning/scSGL", "api_url": "https://rseng.github.io/software/api/repos/github/Single-Cell-Graph-Learning/scSGL"}, {"uid": "github/langfzac/Photodynamics.jl", "html_url": "https://rseng.github.io/software/repository/github/langfzac/Photodynamics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/langfzac/Photodynamics.jl"}, {"uid": "github/yangao07/TideHunter", "html_url": "https://rseng.github.io/software/repository/github/yangao07/TideHunter", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/TideHunter"}, {"uid": "github/yangao07/abPOA", "html_url": "https://rseng.github.io/software/repository/github/yangao07/abPOA", "api_url": "https://rseng.github.io/software/api/repos/github/yangao07/abPOA"}, {"uid": "github/openmm/openmm", "html_url": "https://rseng.github.io/software/repository/github/openmm/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/openmm/openmm"}, {"uid": "github/jlustigy/coronagraph", "html_url": "https://rseng.github.io/software/repository/github/jlustigy/coronagraph", "api_url": "https://rseng.github.io/software/api/repos/github/jlustigy/coronagraph"}, {"uid": "github/ulilautenschlager/crimp", "html_url": "https://rseng.github.io/software/repository/github/ulilautenschlager/crimp", "api_url": "https://rseng.github.io/software/api/repos/github/ulilautenschlager/crimp"}, {"uid": "github/monarch-initiative/loinc2hpo", "html_url": "https://rseng.github.io/software/repository/github/monarch-initiative/loinc2hpo", "api_url": "https://rseng.github.io/software/api/repos/github/monarch-initiative/loinc2hpo"}, {"uid": "github/tkerscher/blast", "html_url": "https://rseng.github.io/software/repository/github/tkerscher/blast", "api_url": "https://rseng.github.io/software/api/repos/github/tkerscher/blast"}, {"uid": "github/JGCRI/rfasst", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rfasst", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rfasst"}, {"uid": "github/JGCRI/stitches", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/stitches", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/stitches"}, {"uid": "github/JGCRI/osiris", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/osiris", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/osiris"}, {"uid": "github/JGCRI/tethys", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/tethys", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/tethys"}, {"uid": "github/JGCRI/ambrosia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/ambrosia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/ambrosia"}, {"uid": "github/JGCRI/rmap", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/rmap", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/rmap"}, {"uid": "github/JGCRI/plutus", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/plutus", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/plutus"}, {"uid": "github/JGCRI/gcamfaostat", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gcamfaostat", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gcamfaostat"}, {"uid": "github/JGCRI/HELPS", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/HELPS", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/HELPS"}, {"uid": "github/JGCRI/gaia", "html_url": "https://rseng.github.io/software/repository/github/JGCRI/gaia", "api_url": "https://rseng.github.io/software/api/repos/github/JGCRI/gaia"}, {"uid": "github/thom991/MSIQuickView", "html_url": "https://rseng.github.io/software/repository/github/thom991/MSIQuickView", "api_url": "https://rseng.github.io/software/api/repos/github/thom991/MSIQuickView"}, {"uid": "github/sunpy/sunpy", "html_url": "https://rseng.github.io/software/repository/github/sunpy/sunpy", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/sunpy"}, {"uid": "github/sunpy/ndcube", "html_url": "https://rseng.github.io/software/repository/github/sunpy/ndcube", "api_url": "https://rseng.github.io/software/api/repos/github/sunpy/ndcube"}, {"uid": "github/nbellomo/Multi_CLASS", "html_url": "https://rseng.github.io/software/repository/github/nbellomo/Multi_CLASS", "api_url": "https://rseng.github.io/software/api/repos/github/nbellomo/Multi_CLASS"}, {"uid": "github/aakepley/autobox", "html_url": "https://rseng.github.io/software/repository/github/aakepley/autobox", "api_url": "https://rseng.github.io/software/api/repos/github/aakepley/autobox"}, {"uid": "github/frescigno/magpy_rv", "html_url": "https://rseng.github.io/software/repository/github/frescigno/magpy_rv", "api_url": "https://rseng.github.io/software/api/repos/github/frescigno/magpy_rv"}, {"uid": "github/timothygebhard/ml4ptp", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/ml4ptp", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/ml4ptp"}, {"uid": "github/timothygebhard/fm4ar", "html_url": "https://rseng.github.io/software/repository/github/timothygebhard/fm4ar", "api_url": "https://rseng.github.io/software/api/repos/github/timothygebhard/fm4ar"}, {"uid": "github/tholoien/empiriciSN", "html_url": "https://rseng.github.io/software/repository/github/tholoien/empiriciSN", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/empiriciSN"}, {"uid": "github/tholoien/XDGMM", "html_url": "https://rseng.github.io/software/repository/github/tholoien/XDGMM", "api_url": "https://rseng.github.io/software/api/repos/github/tholoien/XDGMM"}, {"uid": "github/alerpaschoal/CODARFE", "html_url": "https://rseng.github.io/software/repository/github/alerpaschoal/CODARFE", "api_url": "https://rseng.github.io/software/api/repos/github/alerpaschoal/CODARFE"}, {"uid": "github/GeomScale/volesti", "html_url": "https://rseng.github.io/software/repository/github/GeomScale/volesti", "api_url": "https://rseng.github.io/software/api/repos/github/GeomScale/volesti"}, {"uid": "github/ysekig/GPMsDB-tk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-tk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-tk"}, {"uid": "github/ysekig/GPMsDB-dbtk", "html_url": "https://rseng.github.io/software/repository/github/ysekig/GPMsDB-dbtk", "api_url": "https://rseng.github.io/software/api/repos/github/ysekig/GPMsDB-dbtk"}, {"uid": "github/ci-for-research/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-research/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-research/self-hosted-runners"}, {"uid": "github/asgr/NFWdist", "html_url": "https://rseng.github.io/software/repository/github/asgr/NFWdist", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/NFWdist"}, {"uid": "github/asgr/ProFuse", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFuse", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFuse"}, {"uid": "github/asgr/Rwcs", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rwcs", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rwcs"}, {"uid": "github/asgr/ProSpect", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProSpect", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProSpect"}, {"uid": "github/asgr/ProFound", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProFound", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProFound"}, {"uid": "github/asgr/hyper.fit", "html_url": "https://rseng.github.io/software/repository/github/asgr/hyper.fit", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/hyper.fit"}, {"uid": "github/asgr/celestial", "html_url": "https://rseng.github.io/software/repository/github/asgr/celestial", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/celestial"}, {"uid": "github/asgr/ProPane", "html_url": "https://rseng.github.io/software/repository/github/asgr/ProPane", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/ProPane"}, {"uid": "github/asgr/Rfits", "html_url": "https://rseng.github.io/software/repository/github/asgr/Rfits", "api_url": "https://rseng.github.io/software/api/repos/github/asgr/Rfits"}, {"uid": "github/SHTOOLS/SHTOOLS", "html_url": "https://rseng.github.io/software/repository/github/SHTOOLS/SHTOOLS", "api_url": "https://rseng.github.io/software/api/repos/github/SHTOOLS/SHTOOLS"}, {"uid": "github/gacou54/pyorthanc", "html_url": "https://rseng.github.io/software/repository/github/gacou54/pyorthanc", "api_url": "https://rseng.github.io/software/api/repos/github/gacou54/pyorthanc"}, {"uid": "github/i-VRESSE/workflow-builder", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/workflow-builder", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/workflow-builder"}, {"uid": "github/i-VRESSE/pdbtbx-ts", "html_url": "https://rseng.github.io/software/repository/github/i-VRESSE/pdbtbx-ts", "api_url": "https://rseng.github.io/software/api/repos/github/i-VRESSE/pdbtbx-ts"}, {"uid": "github/low-sky/cprops", "html_url": "https://rseng.github.io/software/repository/github/low-sky/cprops", "api_url": "https://rseng.github.io/software/api/repos/github/low-sky/cprops"}, {"uid": "github/Alcampopiano/hypothesize", "html_url": "https://rseng.github.io/software/repository/github/Alcampopiano/hypothesize", "api_url": "https://rseng.github.io/software/api/repos/github/Alcampopiano/hypothesize"}, {"uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_lGRBs"}, {"uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", "html_url": "https://rseng.github.io/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", "api_url": "https://rseng.github.io/software/api/repos/github/DebduttaPaul/luminosity_function_of_sGRBs"}, {"uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "html_url": "https://rseng.github.io/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", "api_url": "https://rseng.github.io/software/api/repos/github/AlphonsG/Rainbow-Optical-Flow-For-ALI"}, {"uid": "github/scotthgn/AGNvar", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/AGNvar", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/AGNvar"}, {"uid": "github/scotthgn/relagn", "html_url": "https://rseng.github.io/software/repository/github/scotthgn/relagn", "api_url": "https://rseng.github.io/software/api/repos/github/scotthgn/relagn"}, {"uid": "github/t-brandt/orvara", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/orvara", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/orvara"}, {"uid": "github/t-brandt/acorns-adi", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/acorns-adi", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/acorns-adi"}, {"uid": "github/t-brandt/fitramp", "html_url": "https://rseng.github.io/software/repository/github/t-brandt/fitramp", "api_url": "https://rseng.github.io/software/api/repos/github/t-brandt/fitramp"}, {"uid": "github/hmtabernero/SteParSyn", "html_url": "https://rseng.github.io/software/repository/github/hmtabernero/SteParSyn", "api_url": "https://rseng.github.io/software/api/repos/github/hmtabernero/SteParSyn"}, {"uid": "github/NMBU-Data-Science/RENT", "html_url": "https://rseng.github.io/software/repository/github/NMBU-Data-Science/RENT", "api_url": "https://rseng.github.io/software/api/repos/github/NMBU-Data-Science/RENT"}, {"uid": "github/krober10nd/SeismicMesh", "html_url": "https://rseng.github.io/software/repository/github/krober10nd/SeismicMesh", "api_url": "https://rseng.github.io/software/api/repos/github/krober10nd/SeismicMesh"}, {"uid": "github/ldliao/jointVIP", "html_url": "https://rseng.github.io/software/repository/github/ldliao/jointVIP", "api_url": "https://rseng.github.io/software/api/repos/github/ldliao/jointVIP"}, {"uid": "github/netrias/rnassist", "html_url": "https://rseng.github.io/software/repository/github/netrias/rnassist", "api_url": "https://rseng.github.io/software/api/repos/github/netrias/rnassist"}, {"uid": "github/timstaley/amisurvey", "html_url": "https://rseng.github.io/software/repository/github/timstaley/amisurvey", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/amisurvey"}, {"uid": "github/timstaley/voevent-parse", "html_url": "https://rseng.github.io/software/repository/github/timstaley/voevent-parse", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/voevent-parse"}, {"uid": "github/timstaley/chimenea", "html_url": "https://rseng.github.io/software/repository/github/timstaley/chimenea", "api_url": "https://rseng.github.io/software/api/repos/github/timstaley/chimenea"}, {"uid": "github/LMJL-Alea/ktest", "html_url": "https://rseng.github.io/software/repository/github/LMJL-Alea/ktest", "api_url": "https://rseng.github.io/software/api/repos/github/LMJL-Alea/ktest"}, {"uid": "github/kavonrtep/dante", "html_url": "https://rseng.github.io/software/repository/github/kavonrtep/dante", "api_url": "https://rseng.github.io/software/api/repos/github/kavonrtep/dante"}, {"uid": "github/atchekho/harmpi", "html_url": "https://rseng.github.io/software/repository/github/atchekho/harmpi", "api_url": "https://rseng.github.io/software/api/repos/github/atchekho/harmpi"}, {"uid": "github/drzeeshanahmed/JWES-Visual", "html_url": "https://rseng.github.io/software/repository/github/drzeeshanahmed/JWES-Visual", "api_url": "https://rseng.github.io/software/api/repos/github/drzeeshanahmed/JWES-Visual"}, {"uid": "github/qutip/qutip", "html_url": "https://rseng.github.io/software/repository/github/qutip/qutip", "api_url": "https://rseng.github.io/software/api/repos/github/qutip/qutip"}, {"uid": "github/cassidymwagner/fluidsf", "html_url": "https://rseng.github.io/software/repository/github/cassidymwagner/fluidsf", "api_url": "https://rseng.github.io/software/api/repos/github/cassidymwagner/fluidsf"}, {"uid": "github/GabrieleParimbelli/COLIBRI", "html_url": "https://rseng.github.io/software/repository/github/GabrieleParimbelli/COLIBRI", "api_url": "https://rseng.github.io/software/api/repos/github/GabrieleParimbelli/COLIBRI"}, {"uid": "github/msailer1234/JWST_Simulation", "html_url": "https://rseng.github.io/software/repository/github/msailer1234/JWST_Simulation", "api_url": "https://rseng.github.io/software/api/repos/github/msailer1234/JWST_Simulation"}, {"uid": "github/siriobelli/flame", "html_url": "https://rseng.github.io/software/repository/github/siriobelli/flame", "api_url": "https://rseng.github.io/software/api/repos/github/siriobelli/flame"}, {"uid": "github/schmidtfa/pyrasa", "html_url": "https://rseng.github.io/software/repository/github/schmidtfa/pyrasa", "api_url": "https://rseng.github.io/software/api/repos/github/schmidtfa/pyrasa"}, {"uid": "github/cgobat/asymmetric_uncertainty", "html_url": "https://rseng.github.io/software/repository/github/cgobat/asymmetric_uncertainty", "api_url": "https://rseng.github.io/software/api/repos/github/cgobat/asymmetric_uncertainty"}, {"uid": "github/shandley/hecatomb", "html_url": "https://rseng.github.io/software/repository/github/shandley/hecatomb", "api_url": "https://rseng.github.io/software/api/repos/github/shandley/hecatomb"}, {"uid": "github/fusk-kpu/StressResponseGenesAtlas", "html_url": "https://rseng.github.io/software/repository/github/fusk-kpu/StressResponseGenesAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/fusk-kpu/StressResponseGenesAtlas"}, {"uid": "github/jstjohn/SeqPrep", "html_url": "https://rseng.github.io/software/repository/github/jstjohn/SeqPrep", "api_url": "https://rseng.github.io/software/api/repos/github/jstjohn/SeqPrep"}, {"uid": "github/MichaelDAlbrow/CMDFitter", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/CMDFitter", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/CMDFitter"}, {"uid": "github/MichaelDAlbrow/pyDIA", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/pyDIA", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/pyDIA"}, {"uid": "github/MichaelDAlbrow/Dazzle", "html_url": "https://rseng.github.io/software/repository/github/MichaelDAlbrow/Dazzle", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelDAlbrow/Dazzle"}, {"uid": "github/AlexanderJuestel/pyheatdemand", "html_url": "https://rseng.github.io/software/repository/github/AlexanderJuestel/pyheatdemand", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderJuestel/pyheatdemand"}, {"uid": "github/arumugamlab/msamtools", "html_url": "https://rseng.github.io/software/repository/github/arumugamlab/msamtools", "api_url": "https://rseng.github.io/software/api/repos/github/arumugamlab/msamtools"}, {"uid": "github/dylancromer/maszcal", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/maszcal", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/maszcal"}, {"uid": "github/dylancromer/ostrich", "html_url": "https://rseng.github.io/software/repository/github/dylancromer/ostrich", "api_url": "https://rseng.github.io/software/api/repos/github/dylancromer/ostrich"}, {"uid": "github/ci-for-science/self-hosted-runners", "html_url": "https://rseng.github.io/software/repository/github/ci-for-science/self-hosted-runners", "api_url": "https://rseng.github.io/software/api/repos/github/ci-for-science/self-hosted-runners"}, {"uid": "github/bcgov/shinyssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/shinyssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/shinyssdtools"}, {"uid": "github/bcgov/ssdtools", "html_url": "https://rseng.github.io/software/repository/github/bcgov/ssdtools", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/ssdtools"}, {"uid": "github/bcgov/bcdata", "html_url": "https://rseng.github.io/software/repository/github/bcgov/bcdata", "api_url": "https://rseng.github.io/software/api/repos/github/bcgov/bcdata"}, {"uid": "github/fury-gl/fury", "html_url": "https://rseng.github.io/software/repository/github/fury-gl/fury", "api_url": "https://rseng.github.io/software/api/repos/github/fury-gl/fury"}, {"uid": "github/coder/code-server", "html_url": "https://rseng.github.io/software/repository/github/coder/code-server", "api_url": "https://rseng.github.io/software/api/repos/github/coder/code-server"}, {"uid": "github/vbaliga/gaussplotR", "html_url": "https://rseng.github.io/software/repository/github/vbaliga/gaussplotR", "api_url": "https://rseng.github.io/software/api/repos/github/vbaliga/gaussplotR"}, {"uid": "github/ZJUFanLab/scTITANS", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/scTITANS", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/scTITANS"}, {"uid": "github/ZJUFanLab/bulk2space", "html_url": "https://rseng.github.io/software/repository/github/ZJUFanLab/bulk2space", "api_url": "https://rseng.github.io/software/api/repos/github/ZJUFanLab/bulk2space"}, {"uid": "github/JuliaLang/julia", "html_url": "https://rseng.github.io/software/repository/github/JuliaLang/julia", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaLang/julia"}, {"uid": "github/HannahMDoherty/ChemGAPP", "html_url": "https://rseng.github.io/software/repository/github/HannahMDoherty/ChemGAPP", "api_url": "https://rseng.github.io/software/api/repos/github/HannahMDoherty/ChemGAPP"}, {"uid": "github/joachimwolff/hyperparameterScoringHiC", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/hyperparameterScoringHiC", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/hyperparameterScoringHiC"}, {"uid": "github/joachimwolff/Hi-cGAN", "html_url": "https://rseng.github.io/software/repository/github/joachimwolff/Hi-cGAN", "api_url": "https://rseng.github.io/software/api/repos/github/joachimwolff/Hi-cGAN"}, {"uid": "github/CavendishAstrophysics/anmap", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/anmap", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/anmap"}, {"uid": "github/CavendishAstrophysics/postmortem", "html_url": "https://rseng.github.io/software/repository/github/CavendishAstrophysics/postmortem", "api_url": "https://rseng.github.io/software/api/repos/github/CavendishAstrophysics/postmortem"}, {"uid": "github/bc3LC/gcamreport", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/gcamreport", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/gcamreport"}, {"uid": "github/bc3LC/medusa", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/medusa", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/medusa"}, {"uid": "github/bc3LC/rhap", "html_url": "https://rseng.github.io/software/repository/github/bc3LC/rhap", "api_url": "https://rseng.github.io/software/api/repos/github/bc3LC/rhap"}, {"uid": "github/mrempel/geohexviz", "html_url": "https://rseng.github.io/software/repository/github/mrempel/geohexviz", "api_url": "https://rseng.github.io/software/api/repos/github/mrempel/geohexviz"}, {"uid": "github/vincentlab/PyFR", "html_url": "https://rseng.github.io/software/repository/github/vincentlab/PyFR", "api_url": "https://rseng.github.io/software/api/repos/github/vincentlab/PyFR"}, {"uid": "github/jianghuaijie/scLRTC", "html_url": "https://rseng.github.io/software/repository/github/jianghuaijie/scLRTC", "api_url": "https://rseng.github.io/software/api/repos/github/jianghuaijie/scLRTC"}, {"uid": "github/ukoethe/vigra", "html_url": "https://rseng.github.io/software/repository/github/ukoethe/vigra", "api_url": "https://rseng.github.io/software/api/repos/github/ukoethe/vigra"}, {"uid": "github/bpairet/mayo_hci", "html_url": "https://rseng.github.io/software/repository/github/bpairet/mayo_hci", "api_url": "https://rseng.github.io/software/api/repos/github/bpairet/mayo_hci"}, {"uid": "github/danStich/dia", "html_url": "https://rseng.github.io/software/repository/github/danStich/dia", "api_url": "https://rseng.github.io/software/api/repos/github/danStich/dia"}, {"uid": "github/OncoRNALab/CiLiQuant", "html_url": "https://rseng.github.io/software/repository/github/OncoRNALab/CiLiQuant", "api_url": "https://rseng.github.io/software/api/repos/github/OncoRNALab/CiLiQuant"}, {"uid": "github/fogellab/multiWGCNA", "html_url": "https://rseng.github.io/software/repository/github/fogellab/multiWGCNA", "api_url": "https://rseng.github.io/software/api/repos/github/fogellab/multiWGCNA"}, {"uid": "github/kanaverse/kana", "html_url": "https://rseng.github.io/software/repository/github/kanaverse/kana", "api_url": "https://rseng.github.io/software/api/repos/github/kanaverse/kana"}, {"uid": "github/cvbuchem/LavAtmos", "html_url": "https://rseng.github.io/software/repository/github/cvbuchem/LavAtmos", "api_url": "https://rseng.github.io/software/api/repos/github/cvbuchem/LavAtmos"}, {"uid": "github/skiehl/wwz", "html_url": "https://rseng.github.io/software/repository/github/skiehl/wwz", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/wwz"}, {"uid": "github/skiehl/lcsim", "html_url": "https://rseng.github.io/software/repository/github/skiehl/lcsim", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/lcsim"}, {"uid": "github/skiehl/polarizationtools", "html_url": "https://rseng.github.io/software/repository/github/skiehl/polarizationtools", "api_url": "https://rseng.github.io/software/api/repos/github/skiehl/polarizationtools"}, {"uid": "github/NikolayOskolkov/MCWorkflow", "html_url": "https://rseng.github.io/software/repository/github/NikolayOskolkov/MCWorkflow", "api_url": "https://rseng.github.io/software/api/repos/github/NikolayOskolkov/MCWorkflow"}, {"uid": "github/SDTC-CPMed/scDrugPrio", "html_url": "https://rseng.github.io/software/repository/github/SDTC-CPMed/scDrugPrio", "api_url": "https://rseng.github.io/software/api/repos/github/SDTC-CPMed/scDrugPrio"}, {"uid": "github/LindleyLentati/TempoNest", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/TempoNest", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/TempoNest"}, {"uid": "github/LindleyLentati/Cobra", "html_url": "https://rseng.github.io/software/repository/github/LindleyLentati/Cobra", "api_url": "https://rseng.github.io/software/api/repos/github/LindleyLentati/Cobra"}, {"uid": "github/seisman/HinetPy", "html_url": "https://rseng.github.io/software/repository/github/seisman/HinetPy", "api_url": "https://rseng.github.io/software/api/repos/github/seisman/HinetPy"}, {"uid": "github/Dylan-Aliberti/Kepler-Collisions", "html_url": "https://rseng.github.io/software/repository/github/Dylan-Aliberti/Kepler-Collisions", "api_url": "https://rseng.github.io/software/api/repos/github/Dylan-Aliberti/Kepler-Collisions"}, {"uid": "github/OpenBioLink/Explorer", "html_url": "https://rseng.github.io/software/repository/github/OpenBioLink/Explorer", "api_url": "https://rseng.github.io/software/api/repos/github/OpenBioLink/Explorer"}, {"uid": "github/gdalle/HiddenMarkovModels.jl", "html_url": "https://rseng.github.io/software/repository/github/gdalle/HiddenMarkovModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gdalle/HiddenMarkovModels.jl"}, {"uid": "github/Someone789/galax2d", "html_url": "https://rseng.github.io/software/repository/github/Someone789/galax2d", "api_url": "https://rseng.github.io/software/api/repos/github/Someone789/galax2d"}, {"uid": "github/metaOmics/MetaPath", "html_url": "https://rseng.github.io/software/repository/github/metaOmics/MetaPath", "api_url": "https://rseng.github.io/software/api/repos/github/metaOmics/MetaPath"}, {"uid": "github/BiodataAnalysisGroup/kmerAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/kmerAnalyzer"}, {"uid": "github/BiodataAnalysisGroup/UMIc", "html_url": "https://rseng.github.io/software/repository/github/BiodataAnalysisGroup/UMIc", "api_url": "https://rseng.github.io/software/api/repos/github/BiodataAnalysisGroup/UMIc"}, {"uid": "github/cns-iu/HRA-supporting-information", "html_url": "https://rseng.github.io/software/repository/github/cns-iu/HRA-supporting-information", "api_url": "https://rseng.github.io/software/api/repos/github/cns-iu/HRA-supporting-information"}, {"uid": "github/RJArthern/WAVI.jl", "html_url": "https://rseng.github.io/software/repository/github/RJArthern/WAVI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RJArthern/WAVI.jl"}, {"uid": "github/tp2vis/distribute", "html_url": "https://rseng.github.io/software/repository/github/tp2vis/distribute", "api_url": "https://rseng.github.io/software/api/repos/github/tp2vis/distribute"}, {"uid": "github/sjteresi/TE_Density", "html_url": "https://rseng.github.io/software/repository/github/sjteresi/TE_Density", "api_url": "https://rseng.github.io/software/api/repos/github/sjteresi/TE_Density"}, {"uid": "github/DragonflyTelescope/dfreproject", "html_url": "https://rseng.github.io/software/repository/github/DragonflyTelescope/dfreproject", "api_url": "https://rseng.github.io/software/api/repos/github/DragonflyTelescope/dfreproject"}, {"uid": "github/ablab/nerpa", "html_url": "https://rseng.github.io/software/repository/github/ablab/nerpa", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/nerpa"}, {"uid": "github/ablab/spades", "html_url": "https://rseng.github.io/software/repository/github/ablab/spades", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/spades"}, {"uid": "github/ablab/quast", "html_url": "https://rseng.github.io/software/repository/github/ablab/quast", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/quast"}, {"uid": "github/ablab/TandemTools", "html_url": "https://rseng.github.io/software/repository/github/ablab/TandemTools", "api_url": "https://rseng.github.io/software/api/repos/github/ablab/TandemTools"}, {"uid": "github/nicolet5/DiffCapAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/nicolet5/DiffCapAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/nicolet5/DiffCapAnalyzer"}, {"uid": "github/carnotresearch/cr-sparse", "html_url": "https://rseng.github.io/software/repository/github/carnotresearch/cr-sparse", "api_url": "https://rseng.github.io/software/api/repos/github/carnotresearch/cr-sparse"}, {"uid": "github/PDBeurope/pdb-images", "html_url": "https://rseng.github.io/software/repository/github/PDBeurope/pdb-images", "api_url": "https://rseng.github.io/software/api/repos/github/PDBeurope/pdb-images"}, {"uid": "github/fjdu/rac-2d", "html_url": "https://rseng.github.io/software/repository/github/fjdu/rac-2d", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/rac-2d"}, {"uid": "github/fjdu/myRadex", "html_url": "https://rseng.github.io/software/repository/github/fjdu/myRadex", "api_url": "https://rseng.github.io/software/api/repos/github/fjdu/myRadex"}, {"uid": "github/djsutherland/py-sdm", "html_url": "https://rseng.github.io/software/repository/github/djsutherland/py-sdm", "api_url": "https://rseng.github.io/software/api/repos/github/djsutherland/py-sdm"}, {"uid": "github/torluca/morphofit", "html_url": "https://rseng.github.io/software/repository/github/torluca/morphofit", "api_url": "https://rseng.github.io/software/api/repos/github/torluca/morphofit"}, {"uid": "github/ClusterMonteCarlo/CMC-COSMIC", "html_url": "https://rseng.github.io/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ClusterMonteCarlo/CMC-COSMIC"}, {"uid": "github/Tomaubier/CoperniFUS", "html_url": "https://rseng.github.io/software/repository/github/Tomaubier/CoperniFUS", "api_url": "https://rseng.github.io/software/api/repos/github/Tomaubier/CoperniFUS"}, {"uid": "github/Astro-Sean/escatter", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/escatter", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/escatter"}, {"uid": "github/Astro-Sean/autophot", "html_url": "https://rseng.github.io/software/repository/github/Astro-Sean/autophot", "api_url": "https://rseng.github.io/software/api/repos/github/Astro-Sean/autophot"}, {"uid": "github/ericsteinbring/PDQ", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/PDQ", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/PDQ"}, {"uid": "github/ericsteinbring/World_Observatory", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/World_Observatory", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/World_Observatory"}, {"uid": "github/ericsteinbring/Special-Blurring", "html_url": "https://rseng.github.io/software/repository/github/ericsteinbring/Special-Blurring", "api_url": "https://rseng.github.io/software/api/repos/github/ericsteinbring/Special-Blurring"}, {"uid": "github/jakevdp/wpca", "html_url": "https://rseng.github.io/software/repository/github/jakevdp/wpca", "api_url": "https://rseng.github.io/software/api/repos/github/jakevdp/wpca"}, {"uid": "github/CNIC-Proteomics/TurboPutative-web", "html_url": "https://rseng.github.io/software/repository/github/CNIC-Proteomics/TurboPutative-web", "api_url": "https://rseng.github.io/software/api/repos/github/CNIC-Proteomics/TurboPutative-web"}, {"uid": "github/hues-platform/cesar-p-core", "html_url": "https://rseng.github.io/software/repository/github/hues-platform/cesar-p-core", "api_url": "https://rseng.github.io/software/api/repos/github/hues-platform/cesar-p-core"}, {"uid": "github/HenrykHaniewicz/PSRVoid", "html_url": "https://rseng.github.io/software/repository/github/HenrykHaniewicz/PSRVoid", "api_url": "https://rseng.github.io/software/api/repos/github/HenrykHaniewicz/PSRVoid"}, {"uid": "github/IRCAD/camp", "html_url": "https://rseng.github.io/software/repository/github/IRCAD/camp", "api_url": "https://rseng.github.io/software/api/repos/github/IRCAD/camp"}, {"uid": "github/londumas/redvsblue", "html_url": "https://rseng.github.io/software/repository/github/londumas/redvsblue", "api_url": "https://rseng.github.io/software/api/repos/github/londumas/redvsblue"}, {"uid": "github/ialopezt/GalLenspy", "html_url": "https://rseng.github.io/software/repository/github/ialopezt/GalLenspy", "api_url": "https://rseng.github.io/software/api/repos/github/ialopezt/GalLenspy"}, {"uid": "github/utrillalab/repromin", "html_url": "https://rseng.github.io/software/repository/github/utrillalab/repromin", "api_url": "https://rseng.github.io/software/api/repos/github/utrillalab/repromin"}, {"uid": "github/nedtaylor/athena", "html_url": "https://rseng.github.io/software/repository/github/nedtaylor/athena", "api_url": "https://rseng.github.io/software/api/repos/github/nedtaylor/athena"}, {"uid": "github/dib-lab/dammit", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/dammit", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/dammit"}, {"uid": "github/dib-lab/sourmash", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/sourmash"}, {"uid": "github/dib-lab/TheGreatGenotyper", "html_url": "https://rseng.github.io/software/repository/github/dib-lab/TheGreatGenotyper", "api_url": "https://rseng.github.io/software/api/repos/github/dib-lab/TheGreatGenotyper"}, {"uid": "github/vdhooftcompmet/MS2LDA", "html_url": "https://rseng.github.io/software/repository/github/vdhooftcompmet/MS2LDA", "api_url": "https://rseng.github.io/software/api/repos/github/vdhooftcompmet/MS2LDA"}, {"uid": "github/gperezs/StarcNet", "html_url": "https://rseng.github.io/software/repository/github/gperezs/StarcNet", "api_url": "https://rseng.github.io/software/api/repos/github/gperezs/StarcNet"}, {"uid": "github/fchuffar/epimedtools", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/epimedtools", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/epimedtools"}, {"uid": "github/fchuffar/protopackage", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/protopackage", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/protopackage"}, {"uid": "github/fchuffar/dmethr", "html_url": "https://rseng.github.io/software/repository/github/fchuffar/dmethr", "api_url": "https://rseng.github.io/software/api/repos/github/fchuffar/dmethr"}, {"uid": "github/yatisht/usher", "html_url": "https://rseng.github.io/software/repository/github/yatisht/usher", "api_url": "https://rseng.github.io/software/api/repos/github/yatisht/usher"}, {"uid": "github/nemesiscode/radtrancode", "html_url": "https://rseng.github.io/software/repository/github/nemesiscode/radtrancode", "api_url": "https://rseng.github.io/software/api/repos/github/nemesiscode/radtrancode"}, {"uid": "github/Punzo/SlicerAstro", "html_url": "https://rseng.github.io/software/repository/github/Punzo/SlicerAstro", "api_url": "https://rseng.github.io/software/api/repos/github/Punzo/SlicerAstro"}, {"uid": "github/haowenz/chromap", "html_url": "https://rseng.github.io/software/repository/github/haowenz/chromap", "api_url": "https://rseng.github.io/software/api/repos/github/haowenz/chromap"}, {"uid": "github/n8thangreen/BCEA", "html_url": "https://rseng.github.io/software/repository/github/n8thangreen/BCEA", "api_url": "https://rseng.github.io/software/api/repos/github/n8thangreen/BCEA"}, {"uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", "html_url": "https://rseng.github.io/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalRegulatoryGenomicsICL/TFBS"}, {"uid": "github/rx-li/EasyCellType", "html_url": "https://rseng.github.io/software/repository/github/rx-li/EasyCellType", "api_url": "https://rseng.github.io/software/api/repos/github/rx-li/EasyCellType"}, {"uid": "github/maxibor/sam2lca", "html_url": "https://rseng.github.io/software/repository/github/maxibor/sam2lca", "api_url": "https://rseng.github.io/software/api/repos/github/maxibor/sam2lca"}, {"uid": "github/hall-lab/speedseq", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/speedseq", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/speedseq"}, {"uid": "github/hall-lab/bamkit", "html_url": "https://rseng.github.io/software/repository/github/hall-lab/bamkit", "api_url": "https://rseng.github.io/software/api/repos/github/hall-lab/bamkit"}, {"uid": "github/WebSky-CITA/XGPaint.jl", "html_url": "https://rseng.github.io/software/repository/github/WebSky-CITA/XGPaint.jl", "api_url": "https://rseng.github.io/software/api/repos/github/WebSky-CITA/XGPaint.jl"}, {"uid": "github/villrv/SuperRAENN", "html_url": "https://rseng.github.io/software/repository/github/villrv/SuperRAENN", "api_url": "https://rseng.github.io/software/api/repos/github/villrv/SuperRAENN"}, {"uid": "github/micahvista/MAMnet", "html_url": "https://rseng.github.io/software/repository/github/micahvista/MAMnet", "api_url": "https://rseng.github.io/software/api/repos/github/micahvista/MAMnet"}, {"uid": "github/LandSciTech/ccviR", "html_url": "https://rseng.github.io/software/repository/github/LandSciTech/ccviR", "api_url": "https://rseng.github.io/software/api/repos/github/LandSciTech/ccviR"}, {"uid": "github/phirling/pyc2ray", "html_url": "https://rseng.github.io/software/repository/github/phirling/pyc2ray", "api_url": "https://rseng.github.io/software/api/repos/github/phirling/pyc2ray"}, {"uid": "github/BerkeleyLab/caffeine", "html_url": "https://rseng.github.io/software/repository/github/BerkeleyLab/caffeine", "api_url": "https://rseng.github.io/software/api/repos/github/BerkeleyLab/caffeine"}, {"uid": "github/jkimlab/msPIPE", "html_url": "https://rseng.github.io/software/repository/github/jkimlab/msPIPE", "api_url": "https://rseng.github.io/software/api/repos/github/jkimlab/msPIPE"}, {"uid": "github/isoverse/isoreader", "html_url": "https://rseng.github.io/software/repository/github/isoverse/isoreader", "api_url": "https://rseng.github.io/software/api/repos/github/isoverse/isoreader"}, {"uid": "github/Degiacomi-Lab/molearn", "html_url": "https://rseng.github.io/software/repository/github/Degiacomi-Lab/molearn", "api_url": "https://rseng.github.io/software/api/repos/github/Degiacomi-Lab/molearn"}, {"uid": "github/SciOmicsLab/PhenoComb", "html_url": "https://rseng.github.io/software/repository/github/SciOmicsLab/PhenoComb", "api_url": "https://rseng.github.io/software/api/repos/github/SciOmicsLab/PhenoComb"}, {"uid": "github/epfl-radio-astro/PINION", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/PINION", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/PINION"}, {"uid": "github/epfl-radio-astro/LiSA", "html_url": "https://rseng.github.io/software/repository/github/epfl-radio-astro/LiSA", "api_url": "https://rseng.github.io/software/api/repos/github/epfl-radio-astro/LiSA"}, {"uid": "github/mpound/pdrtpy", "html_url": "https://rseng.github.io/software/repository/github/mpound/pdrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/pdrtpy"}, {"uid": "github/mpound/comb", "html_url": "https://rseng.github.io/software/repository/github/mpound/comb", "api_url": "https://rseng.github.io/software/api/repos/github/mpound/comb"}, {"uid": "github/snfactory/binaryoffset", "html_url": "https://rseng.github.io/software/repository/github/snfactory/binaryoffset", "api_url": "https://rseng.github.io/software/api/repos/github/snfactory/binaryoffset"}, {"uid": "github/schochastics/graphlayouts", "html_url": "https://rseng.github.io/software/repository/github/schochastics/graphlayouts", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/graphlayouts"}, {"uid": "github/schochastics/netrankr", "html_url": "https://rseng.github.io/software/repository/github/schochastics/netrankr", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/netrankr"}, {"uid": "github/schochastics/signnet", "html_url": "https://rseng.github.io/software/repository/github/schochastics/signnet", "api_url": "https://rseng.github.io/software/api/repos/github/schochastics/signnet"}, {"uid": "github/pcingola/SnpEff", "html_url": "https://rseng.github.io/software/repository/github/pcingola/SnpEff", "api_url": "https://rseng.github.io/software/api/repos/github/pcingola/SnpEff"}, {"uid": "github/surf-eds/one-button-compute", "html_url": "https://rseng.github.io/software/repository/github/surf-eds/one-button-compute", "api_url": "https://rseng.github.io/software/api/repos/github/surf-eds/one-button-compute"}, {"uid": "github/SuperKogito/spafe", "html_url": "https://rseng.github.io/software/repository/github/SuperKogito/spafe", "api_url": "https://rseng.github.io/software/api/repos/github/SuperKogito/spafe"}, {"uid": "github/mehdirezaie/SYSNet", "html_url": "https://rseng.github.io/software/repository/github/mehdirezaie/SYSNet", "api_url": "https://rseng.github.io/software/api/repos/github/mehdirezaie/SYSNet"}, {"uid": "github/NathanSandford/Chem-I-Calc", "html_url": "https://rseng.github.io/software/repository/github/NathanSandford/Chem-I-Calc", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSandford/Chem-I-Calc"}, {"uid": "github/exoclim/aeolus", "html_url": "https://rseng.github.io/software/repository/github/exoclim/aeolus", "api_url": "https://rseng.github.io/software/api/repos/github/exoclim/aeolus"}, {"uid": "github/mendezVKI/MODULO", "html_url": "https://rseng.github.io/software/repository/github/mendezVKI/MODULO", "api_url": "https://rseng.github.io/software/api/repos/github/mendezVKI/MODULO"}, {"uid": "github/QZH2022/germline_flow", "html_url": "https://rseng.github.io/software/repository/github/QZH2022/germline_flow", "api_url": "https://rseng.github.io/software/api/repos/github/QZH2022/germline_flow"}, {"uid": "github/christophuv/PeakBot_example", "html_url": "https://rseng.github.io/software/repository/github/christophuv/PeakBot_example", "api_url": "https://rseng.github.io/software/api/repos/github/christophuv/PeakBot_example"}, {"uid": "github/csiro-risk-assessment/mozzie", "html_url": "https://rseng.github.io/software/repository/github/csiro-risk-assessment/mozzie", "api_url": "https://rseng.github.io/software/api/repos/github/csiro-risk-assessment/mozzie"}, {"uid": "github/TORCH-Consortium/MAGMA", "html_url": "https://rseng.github.io/software/repository/github/TORCH-Consortium/MAGMA", "api_url": "https://rseng.github.io/software/api/repos/github/TORCH-Consortium/MAGMA"}, {"uid": "github/markur4/plotastic", "html_url": "https://rseng.github.io/software/repository/github/markur4/plotastic", "api_url": "https://rseng.github.io/software/api/repos/github/markur4/plotastic"}, {"uid": "github/dgerosa/spops", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/spops", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/spops"}, {"uid": "github/dgerosa/gwdet", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/gwdet", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/gwdet"}, {"uid": "github/dgerosa/surrkick", "html_url": "https://rseng.github.io/software/repository/github/dgerosa/surrkick", "api_url": "https://rseng.github.io/software/api/repos/github/dgerosa/surrkick"}, {"uid": "github/mpc-bioinformatics/CalibraCurve", "html_url": "https://rseng.github.io/software/repository/github/mpc-bioinformatics/CalibraCurve", "api_url": "https://rseng.github.io/software/api/repos/github/mpc-bioinformatics/CalibraCurve"}, {"uid": "github/cosmostat/pmclib", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/pmclib", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/pmclib"}, {"uid": "github/cosmostat/CosmoPMC", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/CosmoPMC", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/CosmoPMC"}, {"uid": "github/cosmostat/nicaea", "html_url": "https://rseng.github.io/software/repository/github/cosmostat/nicaea", "api_url": "https://rseng.github.io/software/api/repos/github/cosmostat/nicaea"}, {"uid": "github/xavierdidelot/clonalorigin", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/clonalorigin", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/clonalorigin"}, {"uid": "github/xavierdidelot/ClonalFrameML", "html_url": "https://rseng.github.io/software/repository/github/xavierdidelot/ClonalFrameML", "api_url": "https://rseng.github.io/software/api/repos/github/xavierdidelot/ClonalFrameML"}, {"uid": "github/martin3141/spant", "html_url": "https://rseng.github.io/software/repository/github/martin3141/spant", "api_url": "https://rseng.github.io/software/api/repos/github/martin3141/spant"}, {"uid": "github/PathwayCommons/grounding-search", "html_url": "https://rseng.github.io/software/repository/github/PathwayCommons/grounding-search", "api_url": "https://rseng.github.io/software/api/repos/github/PathwayCommons/grounding-search"}, {"uid": "github/EpiVec/TDLM", "html_url": "https://rseng.github.io/software/repository/github/EpiVec/TDLM", "api_url": "https://rseng.github.io/software/api/repos/github/EpiVec/TDLM"}, {"uid": "github/ryokbys/nap", "html_url": "https://rseng.github.io/software/repository/github/ryokbys/nap", "api_url": "https://rseng.github.io/software/api/repos/github/ryokbys/nap"}, {"uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPOMDP/CompressedBeliefMDPs.jl"}, {"uid": "github/backyardworlds/wiseview", "html_url": "https://rseng.github.io/software/repository/github/backyardworlds/wiseview", "api_url": "https://rseng.github.io/software/api/repos/github/backyardworlds/wiseview"}, {"uid": "github/smithlabcode/dnmtools", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/dnmtools", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/dnmtools"}, {"uid": "github/smithlabcode/falco", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/falco", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/falco"}, {"uid": "github/smithlabcode/abismal", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/abismal", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/abismal"}, {"uid": "github/smithlabcode/preseq", "html_url": "https://rseng.github.io/software/repository/github/smithlabcode/preseq", "api_url": "https://rseng.github.io/software/api/repos/github/smithlabcode/preseq"}, {"uid": "github/zavolanlab/PAQR2", "html_url": "https://rseng.github.io/software/repository/github/zavolanlab/PAQR2", "api_url": "https://rseng.github.io/software/api/repos/github/zavolanlab/PAQR2"}, {"uid": "github/tvh0021/aweSOM", "html_url": "https://rseng.github.io/software/repository/github/tvh0021/aweSOM", "api_url": "https://rseng.github.io/software/api/repos/github/tvh0021/aweSOM"}, {"uid": "github/AUTODIAL/AutoEIS", "html_url": "https://rseng.github.io/software/repository/github/AUTODIAL/AutoEIS", "api_url": "https://rseng.github.io/software/api/repos/github/AUTODIAL/AutoEIS"}, {"uid": "github/juzikong/photGalIMF", "html_url": "https://rseng.github.io/software/repository/github/juzikong/photGalIMF", "api_url": "https://rseng.github.io/software/api/repos/github/juzikong/photGalIMF"}, {"uid": "github/HITS-AIN/PINK", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/PINK", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/PINK"}, {"uid": "github/HITS-AIN/GPCC.jl", "html_url": "https://rseng.github.io/software/repository/github/HITS-AIN/GPCC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/HITS-AIN/GPCC.jl"}, {"uid": "github/hajimes/mmh3", "html_url": "https://rseng.github.io/software/repository/github/hajimes/mmh3", "api_url": "https://rseng.github.io/software/api/repos/github/hajimes/mmh3"}, {"uid": "github/adrn/SuperFreq", "html_url": "https://rseng.github.io/software/repository/github/adrn/SuperFreq", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/SuperFreq"}, {"uid": "github/adrn/schwimmbad", "html_url": "https://rseng.github.io/software/repository/github/adrn/schwimmbad", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/schwimmbad"}, {"uid": "github/adrn/pyia", "html_url": "https://rseng.github.io/software/repository/github/adrn/pyia", "api_url": "https://rseng.github.io/software/api/repos/github/adrn/pyia"}, {"uid": "github/huiwenke/MineProt", "html_url": "https://rseng.github.io/software/repository/github/huiwenke/MineProt", "api_url": "https://rseng.github.io/software/api/repos/github/huiwenke/MineProt"}, {"uid": "github/wajidarshad/ESIDE", "html_url": "https://rseng.github.io/software/repository/github/wajidarshad/ESIDE", "api_url": "https://rseng.github.io/software/api/repos/github/wajidarshad/ESIDE"}, {"uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", "html_url": "https://rseng.github.io/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Rohit-Kundu/ET-NET_Covid-Detection"}, {"uid": "github/PyPSA/linopy", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/linopy", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/linopy"}, {"uid": "github/PyPSA/atlite", "html_url": "https://rseng.github.io/software/repository/github/PyPSA/atlite", "api_url": "https://rseng.github.io/software/api/repos/github/PyPSA/atlite"}, {"uid": "github/guilledufort/EnanoFASTQ", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EnanoFASTQ", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EnanoFASTQ"}, {"uid": "github/guilledufort/EMVC-2", "html_url": "https://rseng.github.io/software/repository/github/guilledufort/EMVC-2", "api_url": "https://rseng.github.io/software/api/repos/github/guilledufort/EMVC-2"}, {"uid": "github/oorb/oorb", "html_url": "https://rseng.github.io/software/repository/github/oorb/oorb", "api_url": "https://rseng.github.io/software/api/repos/github/oorb/oorb"}, {"uid": "github/neeravkaushal/RIDs-in-WCDs", "html_url": "https://rseng.github.io/software/repository/github/neeravkaushal/RIDs-in-WCDs", "api_url": "https://rseng.github.io/software/api/repos/github/neeravkaushal/RIDs-in-WCDs"}, {"uid": "github/thejasvibr/bat_beamshapes", "html_url": "https://rseng.github.io/software/repository/github/thejasvibr/bat_beamshapes", "api_url": "https://rseng.github.io/software/api/repos/github/thejasvibr/bat_beamshapes"}, {"uid": "github/tylunel/pvpumpingsystem", "html_url": "https://rseng.github.io/software/repository/github/tylunel/pvpumpingsystem", "api_url": "https://rseng.github.io/software/api/repos/github/tylunel/pvpumpingsystem"}, {"uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", "html_url": "https://rseng.github.io/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", "api_url": "https://rseng.github.io/software/api/repos/github/Wenxin-Wan/ephor_wp4_method_tutorial"}, {"uid": "github/Hi-COLACode/Hi-COLA", "html_url": "https://rseng.github.io/software/repository/github/Hi-COLACode/Hi-COLA", "api_url": "https://rseng.github.io/software/api/repos/github/Hi-COLACode/Hi-COLA"}, {"uid": "github/OpenQuantumComputing/quantumreservoirpy", "html_url": "https://rseng.github.io/software/repository/github/OpenQuantumComputing/quantumreservoirpy", "api_url": "https://rseng.github.io/software/api/repos/github/OpenQuantumComputing/quantumreservoirpy"}, {"uid": "github/profjsb/deepCR", "html_url": "https://rseng.github.io/software/repository/github/profjsb/deepCR", "api_url": "https://rseng.github.io/software/api/repos/github/profjsb/deepCR"}, {"uid": "github/robdjeff/eagles", "html_url": "https://rseng.github.io/software/repository/github/robdjeff/eagles", "api_url": "https://rseng.github.io/software/api/repos/github/robdjeff/eagles"}, {"uid": "github/MickaelRigault/skysurvey", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/skysurvey", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/skysurvey"}, {"uid": "github/MickaelRigault/ztfquery", "html_url": "https://rseng.github.io/software/repository/github/MickaelRigault/ztfquery", "api_url": "https://rseng.github.io/software/api/repos/github/MickaelRigault/ztfquery"}, {"uid": "github/soleneulmer/bem", "html_url": "https://rseng.github.io/software/repository/github/soleneulmer/bem", "api_url": "https://rseng.github.io/software/api/repos/github/soleneulmer/bem"}, {"uid": "github/aviadpi/SparseBLS", "html_url": "https://rseng.github.io/software/repository/github/aviadpi/SparseBLS", "api_url": "https://rseng.github.io/software/api/repos/github/aviadpi/SparseBLS"}, {"uid": "github/Glogobyte/miRGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Glogobyte/miRGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Glogobyte/miRGalaxy"}, {"uid": "github/predsci/hipft", "html_url": "https://rseng.github.io/software/repository/github/predsci/hipft", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/hipft"}, {"uid": "github/predsci/OFT", "html_url": "https://rseng.github.io/software/repository/github/predsci/OFT", "api_url": "https://rseng.github.io/software/api/repos/github/predsci/OFT"}, {"uid": "github/probml/dynamax", "html_url": "https://rseng.github.io/software/repository/github/probml/dynamax", "api_url": "https://rseng.github.io/software/api/repos/github/probml/dynamax"}, {"uid": "github/OSS-Lab/ChemChaste", "html_url": "https://rseng.github.io/software/repository/github/OSS-Lab/ChemChaste", "api_url": "https://rseng.github.io/software/api/repos/github/OSS-Lab/ChemChaste"}, {"uid": "github/DataIntellSystLab/KARGA", "html_url": "https://rseng.github.io/software/repository/github/DataIntellSystLab/KARGA", "api_url": "https://rseng.github.io/software/api/repos/github/DataIntellSystLab/KARGA"}, {"uid": "github/nathanael-fijalkow/DeepSynth", "html_url": "https://rseng.github.io/software/repository/github/nathanael-fijalkow/DeepSynth", "api_url": "https://rseng.github.io/software/api/repos/github/nathanael-fijalkow/DeepSynth"}, {"uid": "github/folsomcp/specpolFlow", "html_url": "https://rseng.github.io/software/repository/github/folsomcp/specpolFlow", "api_url": "https://rseng.github.io/software/api/repos/github/folsomcp/specpolFlow"}, {"uid": "github/CouncilDataProject/speakerbox", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/speakerbox", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/speakerbox"}, {"uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", "html_url": "https://rseng.github.io/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", "api_url": "https://rseng.github.io/software/api/repos/github/CouncilDataProject/cookiecutter-cdp-deployment"}, {"uid": "github/jmhuie/Slicer-SegmentGeometry", "html_url": "https://rseng.github.io/software/repository/github/jmhuie/Slicer-SegmentGeometry", "api_url": "https://rseng.github.io/software/api/repos/github/jmhuie/Slicer-SegmentGeometry"}, {"uid": "github/Washington-University/CiftiLib", "html_url": "https://rseng.github.io/software/repository/github/Washington-University/CiftiLib", "api_url": "https://rseng.github.io/software/api/repos/github/Washington-University/CiftiLib"}, {"uid": "github/darrenjw/jax-smfsb", "html_url": "https://rseng.github.io/software/repository/github/darrenjw/jax-smfsb", "api_url": "https://rseng.github.io/software/api/repos/github/darrenjw/jax-smfsb"}, {"uid": "github/WangLabTHU/DeSP", "html_url": "https://rseng.github.io/software/repository/github/WangLabTHU/DeSP", "api_url": "https://rseng.github.io/software/api/repos/github/WangLabTHU/DeSP"}, {"uid": "github/marinebon/obisindicators", "html_url": "https://rseng.github.io/software/repository/github/marinebon/obisindicators", "api_url": "https://rseng.github.io/software/api/repos/github/marinebon/obisindicators"}, {"uid": "github/soylentdeen/MoogStokes", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/MoogStokes", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/MoogStokes"}, {"uid": "github/soylentdeen/CounterPoint", "html_url": "https://rseng.github.io/software/repository/github/soylentdeen/CounterPoint", "api_url": "https://rseng.github.io/software/api/repos/github/soylentdeen/CounterPoint"}, {"uid": "github/precice/micro-manager", "html_url": "https://rseng.github.io/software/repository/github/precice/micro-manager", "api_url": "https://rseng.github.io/software/api/repos/github/precice/micro-manager"}, {"uid": "github/precice/aste", "html_url": "https://rseng.github.io/software/repository/github/precice/aste", "api_url": "https://rseng.github.io/software/api/repos/github/precice/aste"}, {"uid": "github/Midnighter/dependency-info", "html_url": "https://rseng.github.io/software/repository/github/Midnighter/dependency-info", "api_url": "https://rseng.github.io/software/api/repos/github/Midnighter/dependency-info"}, {"uid": "github/dianna-ai/dianna", "html_url": "https://rseng.github.io/software/repository/github/dianna-ai/dianna", "api_url": "https://rseng.github.io/software/api/repos/github/dianna-ai/dianna"}, {"uid": "github/bandframework/Taweret", "html_url": "https://rseng.github.io/software/repository/github/bandframework/Taweret", "api_url": "https://rseng.github.io/software/api/repos/github/bandframework/Taweret"}, {"uid": "github/damonge/CUTE", "html_url": "https://rseng.github.io/software/repository/github/damonge/CUTE", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CUTE"}, {"uid": "github/damonge/schNell", "html_url": "https://rseng.github.io/software/repository/github/damonge/schNell", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/schNell"}, {"uid": "github/damonge/CoLoRe", "html_url": "https://rseng.github.io/software/repository/github/damonge/CoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CoLoRe"}, {"uid": "github/damonge/CRIME", "html_url": "https://rseng.github.io/software/repository/github/damonge/CRIME", "api_url": "https://rseng.github.io/software/api/repos/github/damonge/CRIME"}, {"uid": "github/DHortaD/Lux", "html_url": "https://rseng.github.io/software/repository/github/DHortaD/Lux", "api_url": "https://rseng.github.io/software/api/repos/github/DHortaD/Lux"}, {"uid": "github/Open-Minds-Lab/MRdataset", "html_url": "https://rseng.github.io/software/repository/github/Open-Minds-Lab/MRdataset", "api_url": "https://rseng.github.io/software/api/repos/github/Open-Minds-Lab/MRdataset"}, {"uid": "github/MICCoM/SSAGES-public", "html_url": "https://rseng.github.io/software/repository/github/MICCoM/SSAGES-public", "api_url": "https://rseng.github.io/software/api/repos/github/MICCoM/SSAGES-public"}, {"uid": "github/saezlab/liana-py", "html_url": "https://rseng.github.io/software/repository/github/saezlab/liana-py", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/liana-py"}, {"uid": "github/saezlab/PHONEMeS", "html_url": "https://rseng.github.io/software/repository/github/saezlab/PHONEMeS", "api_url": "https://rseng.github.io/software/api/repos/github/saezlab/PHONEMeS"}, {"uid": "github/trevorgokey/besmarts", "html_url": "https://rseng.github.io/software/repository/github/trevorgokey/besmarts", "api_url": "https://rseng.github.io/software/api/repos/github/trevorgokey/besmarts"}, {"uid": "github/gogrean/PyXel", "html_url": "https://rseng.github.io/software/repository/github/gogrean/PyXel", "api_url": "https://rseng.github.io/software/api/repos/github/gogrean/PyXel"}, {"uid": "github/taoliu/MACS", "html_url": "https://rseng.github.io/software/repository/github/taoliu/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/taoliu/MACS"}, {"uid": "github/Pithikos/C-Thread-Pool", "html_url": "https://rseng.github.io/software/repository/github/Pithikos/C-Thread-Pool", "api_url": "https://rseng.github.io/software/api/repos/github/Pithikos/C-Thread-Pool"}, {"uid": "github/jgrembi/riskCommunicator", "html_url": "https://rseng.github.io/software/repository/github/jgrembi/riskCommunicator", "api_url": "https://rseng.github.io/software/api/repos/github/jgrembi/riskCommunicator"}, {"uid": "github/prmunday/Immunolyser", "html_url": "https://rseng.github.io/software/repository/github/prmunday/Immunolyser", "api_url": "https://rseng.github.io/software/api/repos/github/prmunday/Immunolyser"}, {"uid": "github/NERC-CEH/RMAVIS", "html_url": "https://rseng.github.io/software/repository/github/NERC-CEH/RMAVIS", "api_url": "https://rseng.github.io/software/api/repos/github/NERC-CEH/RMAVIS"}, {"uid": "github/JulioHC00/PEPITA", "html_url": "https://rseng.github.io/software/repository/github/JulioHC00/PEPITA", "api_url": "https://rseng.github.io/software/api/repos/github/JulioHC00/PEPITA"}, {"uid": "github/mbejger/polgraw-allsky", "html_url": "https://rseng.github.io/software/repository/github/mbejger/polgraw-allsky", "api_url": "https://rseng.github.io/software/api/repos/github/mbejger/polgraw-allsky"}, {"uid": "github/ANTsX/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ANTsX/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ANTsX/ANTs"}, {"uid": "github/ml-evs/matador", "html_url": "https://rseng.github.io/software/repository/github/ml-evs/matador", "api_url": "https://rseng.github.io/software/api/repos/github/ml-evs/matador"}, {"uid": "github/ks905383/xagg", "html_url": "https://rseng.github.io/software/repository/github/ks905383/xagg", "api_url": "https://rseng.github.io/software/api/repos/github/ks905383/xagg"}, {"uid": "github/martinghunt/ziplign", "html_url": "https://rseng.github.io/software/repository/github/martinghunt/ziplign", "api_url": "https://rseng.github.io/software/api/repos/github/martinghunt/ziplign"}, {"uid": "github/sandmanns/CopyDetective", "html_url": "https://rseng.github.io/software/repository/github/sandmanns/CopyDetective", "api_url": "https://rseng.github.io/software/api/repos/github/sandmanns/CopyDetective"}, {"uid": "github/HDFGroup/hdf5", "html_url": "https://rseng.github.io/software/repository/github/HDFGroup/hdf5", "api_url": "https://rseng.github.io/software/api/repos/github/HDFGroup/hdf5"}, {"uid": "github/jarvist/Julia-Phonons", "html_url": "https://rseng.github.io/software/repository/github/jarvist/Julia-Phonons", "api_url": "https://rseng.github.io/software/api/repos/github/jarvist/Julia-Phonons"}, {"uid": "github/stermzsofi/TiDE", "html_url": "https://rseng.github.io/software/repository/github/stermzsofi/TiDE", "api_url": "https://rseng.github.io/software/api/repos/github/stermzsofi/TiDE"}, {"uid": "github/KathrynJones1/catwoman", "html_url": "https://rseng.github.io/software/repository/github/KathrynJones1/catwoman", "api_url": "https://rseng.github.io/software/api/repos/github/KathrynJones1/catwoman"}, {"uid": "github/networkx/networkx", "html_url": "https://rseng.github.io/software/repository/github/networkx/networkx", "api_url": "https://rseng.github.io/software/api/repos/github/networkx/networkx"}, {"uid": "github/bloch-labs/bloch", "html_url": "https://rseng.github.io/software/repository/github/bloch-labs/bloch", "api_url": "https://rseng.github.io/software/api/repos/github/bloch-labs/bloch"}, {"uid": "github/eltevo/steps", "html_url": "https://rseng.github.io/software/repository/github/eltevo/steps", "api_url": "https://rseng.github.io/software/api/repos/github/eltevo/steps"}, {"uid": "github/scikit-learn-contrib/hdbscan", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn-contrib/hdbscan", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn-contrib/hdbscan"}, {"uid": "github/GenomePathogenAnalysisService/read-it-and-keep", "html_url": "https://rseng.github.io/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", "api_url": "https://rseng.github.io/software/api/repos/github/GenomePathogenAnalysisService/read-it-and-keep"}, {"uid": "github/athob/py-ananke", "html_url": "https://rseng.github.io/software/repository/github/athob/py-ananke", "api_url": "https://rseng.github.io/software/api/repos/github/athob/py-ananke"}, {"uid": "github/Anirbancosmo/limpy", "html_url": "https://rseng.github.io/software/repository/github/Anirbancosmo/limpy", "api_url": "https://rseng.github.io/software/api/repos/github/Anirbancosmo/limpy"}, {"uid": "github/grd349/PBjam", "html_url": "https://rseng.github.io/software/repository/github/grd349/PBjam", "api_url": "https://rseng.github.io/software/api/repos/github/grd349/PBjam"}, {"uid": "github/AstroUGent/shadowfax", "html_url": "https://rseng.github.io/software/repository/github/AstroUGent/shadowfax", "api_url": "https://rseng.github.io/software/api/repos/github/AstroUGent/shadowfax"}, {"uid": "github/parmoo/parmoo", "html_url": "https://rseng.github.io/software/repository/github/parmoo/parmoo", "api_url": "https://rseng.github.io/software/api/repos/github/parmoo/parmoo"}, {"uid": "github/SIOSlab/exodetbox", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/exodetbox", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/exodetbox"}, {"uid": "github/SIOSlab/NEXO", "html_url": "https://rseng.github.io/software/repository/github/SIOSlab/NEXO", "api_url": "https://rseng.github.io/software/api/repos/github/SIOSlab/NEXO"}, {"uid": "github/DGtal-team/DGtal", "html_url": "https://rseng.github.io/software/repository/github/DGtal-team/DGtal", "api_url": "https://rseng.github.io/software/api/repos/github/DGtal-team/DGtal"}, {"uid": "github/fgbuster/fgbuster", "html_url": "https://rseng.github.io/software/repository/github/fgbuster/fgbuster", "api_url": "https://rseng.github.io/software/api/repos/github/fgbuster/fgbuster"}, {"uid": "github/c-zhou/yahs", "html_url": "https://rseng.github.io/software/repository/github/c-zhou/yahs", "api_url": "https://rseng.github.io/software/api/repos/github/c-zhou/yahs"}, {"uid": "github/NickMilsonPhysics/BinaryStarSolver", "html_url": "https://rseng.github.io/software/repository/github/NickMilsonPhysics/BinaryStarSolver", "api_url": "https://rseng.github.io/software/api/repos/github/NickMilsonPhysics/BinaryStarSolver"}, {"uid": "github/martinfleis/clustergram", "html_url": "https://rseng.github.io/software/repository/github/martinfleis/clustergram", "api_url": "https://rseng.github.io/software/api/repos/github/martinfleis/clustergram"}, {"uid": "github/surhh/nfitsview", "html_url": "https://rseng.github.io/software/repository/github/surhh/nfitsview", "api_url": "https://rseng.github.io/software/api/repos/github/surhh/nfitsview"}, {"uid": "github/wwood/kingfisher-download", "html_url": "https://rseng.github.io/software/repository/github/wwood/kingfisher-download", "api_url": "https://rseng.github.io/software/api/repos/github/wwood/kingfisher-download"}, {"uid": "github/jfmrod/MAPseq", "html_url": "https://rseng.github.io/software/repository/github/jfmrod/MAPseq", "api_url": "https://rseng.github.io/software/api/repos/github/jfmrod/MAPseq"}, {"uid": "github/jeancmaia/mcglm", "html_url": "https://rseng.github.io/software/repository/github/jeancmaia/mcglm", "api_url": "https://rseng.github.io/software/api/repos/github/jeancmaia/mcglm"}, {"uid": "github/nell-byler/cloudyfsps", "html_url": "https://rseng.github.io/software/repository/github/nell-byler/cloudyfsps", "api_url": "https://rseng.github.io/software/api/repos/github/nell-byler/cloudyfsps"}, {"uid": "github/erf-model/ERF", "html_url": "https://rseng.github.io/software/repository/github/erf-model/ERF", "api_url": "https://rseng.github.io/software/api/repos/github/erf-model/ERF"}, {"uid": "github/AIgnesti/PT-REX", "html_url": "https://rseng.github.io/software/repository/github/AIgnesti/PT-REX", "api_url": "https://rseng.github.io/software/api/repos/github/AIgnesti/PT-REX"}, {"uid": "github/Hyperthetical/DarkMatters", "html_url": "https://rseng.github.io/software/repository/github/Hyperthetical/DarkMatters", "api_url": "https://rseng.github.io/software/api/repos/github/Hyperthetical/DarkMatters"}, {"uid": "github/RTIP/artip", "html_url": "https://rseng.github.io/software/repository/github/RTIP/artip", "api_url": "https://rseng.github.io/software/api/repos/github/RTIP/artip"}, {"uid": "github/DidierMurilloF/FielDHub", "html_url": "https://rseng.github.io/software/repository/github/DidierMurilloF/FielDHub", "api_url": "https://rseng.github.io/software/api/repos/github/DidierMurilloF/FielDHub"}, {"uid": "github/BaroudLab/Griottes", "html_url": "https://rseng.github.io/software/repository/github/BaroudLab/Griottes", "api_url": "https://rseng.github.io/software/api/repos/github/BaroudLab/Griottes"}, {"uid": "github/projectmesa/mesa", "html_url": "https://rseng.github.io/software/repository/github/projectmesa/mesa", "api_url": "https://rseng.github.io/software/api/repos/github/projectmesa/mesa"}, {"uid": "github/JulianBMunoz/Zeus21", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/Zeus21", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/Zeus21"}, {"uid": "github/JulianBMunoz/21cmvFAST", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/21cmvFAST", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/21cmvFAST"}, {"uid": "github/JulianBMunoz/RelicFast", "html_url": "https://rseng.github.io/software/repository/github/JulianBMunoz/RelicFast", "api_url": "https://rseng.github.io/software/api/repos/github/JulianBMunoz/RelicFast"}, {"uid": "github/tldr-group/samba-web", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/samba-web", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/samba-web"}, {"uid": "github/tldr-group/taufactor", "html_url": "https://rseng.github.io/software/repository/github/tldr-group/taufactor", "api_url": "https://rseng.github.io/software/api/repos/github/tldr-group/taufactor"}, {"uid": "github/kmlefran/aiida-aimall", "html_url": "https://rseng.github.io/software/repository/github/kmlefran/aiida-aimall", "api_url": "https://rseng.github.io/software/api/repos/github/kmlefran/aiida-aimall"}, {"uid": "github/GeoscienceAustralia/eo-tides", "html_url": "https://rseng.github.io/software/repository/github/GeoscienceAustralia/eo-tides", "api_url": "https://rseng.github.io/software/api/repos/github/GeoscienceAustralia/eo-tides"}, {"uid": "github/lengoctram/DustPOL-py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL-py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL-py"}, {"uid": "github/lengoctram/DustPOL_py", "html_url": "https://rseng.github.io/software/repository/github/lengoctram/DustPOL_py", "api_url": "https://rseng.github.io/software/api/repos/github/lengoctram/DustPOL_py"}, {"uid": "github/ernewton/tellrv", "html_url": "https://rseng.github.io/software/repository/github/ernewton/tellrv", "api_url": "https://rseng.github.io/software/api/repos/github/ernewton/tellrv"}, {"uid": "github/mengaldo/PySPOD", "html_url": "https://rseng.github.io/software/repository/github/mengaldo/PySPOD", "api_url": "https://rseng.github.io/software/api/repos/github/mengaldo/PySPOD"}, {"uid": "github/kusmic/pycosie", "html_url": "https://rseng.github.io/software/repository/github/kusmic/pycosie", "api_url": "https://rseng.github.io/software/api/repos/github/kusmic/pycosie"}, {"uid": "github/mr-superonion/FPFS", "html_url": "https://rseng.github.io/software/repository/github/mr-superonion/FPFS", "api_url": "https://rseng.github.io/software/api/repos/github/mr-superonion/FPFS"}, {"uid": "github/JuliaArrays/BlockArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/BlockArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/BlockArrays.jl"}, {"uid": "github/JuliaArrays/InfiniteArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/InfiniteArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/InfiniteArrays.jl"}, {"uid": "github/JuliaArrays/LazyArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaArrays/LazyArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaArrays/LazyArrays.jl"}, {"uid": "github/Alymantara/pydoppler", "html_url": "https://rseng.github.io/software/repository/github/Alymantara/pydoppler", "api_url": "https://rseng.github.io/software/api/repos/github/Alymantara/pydoppler"}, {"uid": "github/salbalkus/CausalTables.jl", "html_url": "https://rseng.github.io/software/repository/github/salbalkus/CausalTables.jl", "api_url": "https://rseng.github.io/software/api/repos/github/salbalkus/CausalTables.jl"}, {"uid": "github/SYalouz/QuantNBody", "html_url": "https://rseng.github.io/software/repository/github/SYalouz/QuantNBody", "api_url": "https://rseng.github.io/software/api/repos/github/SYalouz/QuantNBody"}, {"uid": "github/s-will/LocARNA", "html_url": "https://rseng.github.io/software/repository/github/s-will/LocARNA", "api_url": "https://rseng.github.io/software/api/repos/github/s-will/LocARNA"}, {"uid": "github/GreiffLab/immuneREF", "html_url": "https://rseng.github.io/software/repository/github/GreiffLab/immuneREF", "api_url": "https://rseng.github.io/software/api/repos/github/GreiffLab/immuneREF"}, {"uid": "github/jorgensd/adios4dolfinx", "html_url": "https://rseng.github.io/software/repository/github/jorgensd/adios4dolfinx", "api_url": "https://rseng.github.io/software/api/repos/github/jorgensd/adios4dolfinx"}, {"uid": "github/CobayaSampler/cobaya", "html_url": "https://rseng.github.io/software/repository/github/CobayaSampler/cobaya", "api_url": "https://rseng.github.io/software/api/repos/github/CobayaSampler/cobaya"}, {"uid": "github/SchmidtDSE/afscgap", "html_url": "https://rseng.github.io/software/repository/github/SchmidtDSE/afscgap", "api_url": "https://rseng.github.io/software/api/repos/github/SchmidtDSE/afscgap"}, {"uid": "github/mikegrudic/MakeCloud", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/MakeCloud", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/MakeCloud"}, {"uid": "github/mikegrudic/pytreegrav", "html_url": "https://rseng.github.io/software/repository/github/mikegrudic/pytreegrav", "api_url": "https://rseng.github.io/software/api/repos/github/mikegrudic/pytreegrav"}, {"uid": "github/tronsgaard/barycorr", "html_url": "https://rseng.github.io/software/repository/github/tronsgaard/barycorr", "api_url": "https://rseng.github.io/software/api/repos/github/tronsgaard/barycorr"}, {"uid": "github/dmnfarrell/epitopepredict", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/epitopepredict", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/epitopepredict"}, {"uid": "github/dmnfarrell/snpgenie", "html_url": "https://rseng.github.io/software/repository/github/dmnfarrell/snpgenie", "api_url": "https://rseng.github.io/software/api/repos/github/dmnfarrell/snpgenie"}, {"uid": "github/mikesmitka/truvot", "html_url": "https://rseng.github.io/software/repository/github/mikesmitka/truvot", "api_url": "https://rseng.github.io/software/api/repos/github/mikesmitka/truvot"}, {"uid": "github/griffithlab/regtools", "html_url": "https://rseng.github.io/software/repository/github/griffithlab/regtools", "api_url": "https://rseng.github.io/software/api/repos/github/griffithlab/regtools"}, {"uid": "github/cholla-hydro/cholla", "html_url": "https://rseng.github.io/software/repository/github/cholla-hydro/cholla", "api_url": "https://rseng.github.io/software/api/repos/github/cholla-hydro/cholla"}, {"uid": "github/rabix/cwl-format", "html_url": "https://rseng.github.io/software/repository/github/rabix/cwl-format", "api_url": "https://rseng.github.io/software/api/repos/github/rabix/cwl-format"}, {"uid": "github/bmoster/emerge", "html_url": "https://rseng.github.io/software/repository/github/bmoster/emerge", "api_url": "https://rseng.github.io/software/api/repos/github/bmoster/emerge"}, {"uid": "github/astromer-science/main-code", "html_url": "https://rseng.github.io/software/repository/github/astromer-science/main-code", "api_url": "https://rseng.github.io/software/api/repos/github/astromer-science/main-code"}, {"uid": "github/DavidRConnell/matlab-igraph", "html_url": "https://rseng.github.io/software/repository/github/DavidRConnell/matlab-igraph", "api_url": "https://rseng.github.io/software/api/repos/github/DavidRConnell/matlab-igraph"}, {"uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "html_url": "https://rseng.github.io/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", "api_url": "https://rseng.github.io/software/api/repos/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset"}, {"uid": "github/U-Alberta/ADaPT-ML", "html_url": "https://rseng.github.io/software/repository/github/U-Alberta/ADaPT-ML", "api_url": "https://rseng.github.io/software/api/repos/github/U-Alberta/ADaPT-ML"}, {"uid": "github/jkluter/MLG", "html_url": "https://rseng.github.io/software/repository/github/jkluter/MLG", "api_url": "https://rseng.github.io/software/api/repos/github/jkluter/MLG"}, {"uid": "github/richford/groupyr", "html_url": "https://rseng.github.io/software/repository/github/richford/groupyr", "api_url": "https://rseng.github.io/software/api/repos/github/richford/groupyr"}, {"uid": "github/marschall-lab/panacus", "html_url": "https://rseng.github.io/software/repository/github/marschall-lab/panacus", "api_url": "https://rseng.github.io/software/api/repos/github/marschall-lab/panacus"}, {"uid": "github/assume-framework/assume", "html_url": "https://rseng.github.io/software/repository/github/assume-framework/assume", "api_url": "https://rseng.github.io/software/api/repos/github/assume-framework/assume"}, {"uid": "github/rambaut/jebl2", "html_url": "https://rseng.github.io/software/repository/github/rambaut/jebl2", "api_url": "https://rseng.github.io/software/api/repos/github/rambaut/jebl2"}, {"uid": "github/davidharvey1986/pyRRG", "html_url": "https://rseng.github.io/software/repository/github/davidharvey1986/pyRRG", "api_url": "https://rseng.github.io/software/api/repos/github/davidharvey1986/pyRRG"}, {"uid": "github/aberer/RogueNaRok", "html_url": "https://rseng.github.io/software/repository/github/aberer/RogueNaRok", "api_url": "https://rseng.github.io/software/api/repos/github/aberer/RogueNaRok"}, {"uid": "github/portsmouth/cmbview", "html_url": "https://rseng.github.io/software/repository/github/portsmouth/cmbview", "api_url": "https://rseng.github.io/software/api/repos/github/portsmouth/cmbview"}, {"uid": "github/WaterFutures/EPyT-Flow", "html_url": "https://rseng.github.io/software/repository/github/WaterFutures/EPyT-Flow", "api_url": "https://rseng.github.io/software/api/repos/github/WaterFutures/EPyT-Flow"}, {"uid": "github/koszullab/pareidolia", "html_url": "https://rseng.github.io/software/repository/github/koszullab/pareidolia", "api_url": "https://rseng.github.io/software/api/repos/github/koszullab/pareidolia"}, {"uid": "github/yuhuan-wu/mobilesal", "html_url": "https://rseng.github.io/software/repository/github/yuhuan-wu/mobilesal", "api_url": "https://rseng.github.io/software/api/repos/github/yuhuan-wu/mobilesal"}, {"uid": "github/PacificBiosciences/FALCON", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/FALCON", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/FALCON"}, {"uid": "github/PacificBiosciences/blasr", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/blasr"}, {"uid": "github/PacificBiosciences/pbbam", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbam", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbam"}, {"uid": "github/PacificBiosciences/pbbioconda", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbbioconda", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbbioconda"}, {"uid": "github/PacificBiosciences/HiPhase", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/HiPhase", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/HiPhase"}, {"uid": "github/PacificBiosciences/kineticsTools", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/kineticsTools", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/kineticsTools"}, {"uid": "github/PacificBiosciences/pbcopper", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcopper", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcopper"}, {"uid": "github/PacificBiosciences/minorseq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/minorseq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/minorseq"}, {"uid": "github/PacificBiosciences/IsoSeq", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/IsoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/IsoSeq"}, {"uid": "github/PacificBiosciences/pbalign", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbalign", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbalign"}, {"uid": "github/PacificBiosciences/pbcore", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbcore", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbcore"}, {"uid": "github/PacificBiosciences/pbmm2", "html_url": "https://rseng.github.io/software/repository/github/PacificBiosciences/pbmm2", "api_url": "https://rseng.github.io/software/api/repos/github/PacificBiosciences/pbmm2"}, {"uid": "github/SPARC-FAIR-Codeathon/aqua", "html_url": "https://rseng.github.io/software/repository/github/SPARC-FAIR-Codeathon/aqua", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-FAIR-Codeathon/aqua"}, {"uid": "github/Cristianetaniguti/Reads2Map", "html_url": "https://rseng.github.io/software/repository/github/Cristianetaniguti/Reads2Map", "api_url": "https://rseng.github.io/software/api/repos/github/Cristianetaniguti/Reads2Map"}, {"uid": "github/AlmaasLab/csdR", "html_url": "https://rseng.github.io/software/repository/github/AlmaasLab/csdR", "api_url": "https://rseng.github.io/software/api/repos/github/AlmaasLab/csdR"}, {"uid": "github/NumericalMathematics/PositiveIntegrators.jl", "html_url": "https://rseng.github.io/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/NumericalMathematics/PositiveIntegrators.jl"}, {"uid": "github/labxscut/ksak", "html_url": "https://rseng.github.io/software/repository/github/labxscut/ksak", "api_url": "https://rseng.github.io/software/api/repos/github/labxscut/ksak"}, {"uid": "github/demorest/nanopipe", "html_url": "https://rseng.github.io/software/repository/github/demorest/nanopipe", "api_url": "https://rseng.github.io/software/api/repos/github/demorest/nanopipe"}, {"uid": "github/rkingsbury/pyEQL", "html_url": "https://rseng.github.io/software/repository/github/rkingsbury/pyEQL", "api_url": "https://rseng.github.io/software/api/repos/github/rkingsbury/pyEQL"}, {"uid": "github/jepegit/cellpy", "html_url": "https://rseng.github.io/software/repository/github/jepegit/cellpy", "api_url": "https://rseng.github.io/software/api/repos/github/jepegit/cellpy"}, {"uid": "github/MichaelAbdul-Masih/SPAMMS", "html_url": "https://rseng.github.io/software/repository/github/MichaelAbdul-Masih/SPAMMS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelAbdul-Masih/SPAMMS"}, {"uid": "github/pmeier/pystiche", "html_url": "https://rseng.github.io/software/repository/github/pmeier/pystiche", "api_url": "https://rseng.github.io/software/api/repos/github/pmeier/pystiche"}, {"uid": "github/qboxcode/qbox-public", "html_url": "https://rseng.github.io/software/repository/github/qboxcode/qbox-public", "api_url": "https://rseng.github.io/software/api/repos/github/qboxcode/qbox-public"}, {"uid": "github/fraserw/TRIPPy", "html_url": "https://rseng.github.io/software/repository/github/fraserw/TRIPPy", "api_url": "https://rseng.github.io/software/api/repos/github/fraserw/TRIPPy"}, {"uid": "github/vicruiser/3Dmapper", "html_url": "https://rseng.github.io/software/repository/github/vicruiser/3Dmapper", "api_url": "https://rseng.github.io/software/api/repos/github/vicruiser/3Dmapper"}, {"uid": "github/davidaknowles/leafcutter", "html_url": "https://rseng.github.io/software/repository/github/davidaknowles/leafcutter", "api_url": "https://rseng.github.io/software/api/repos/github/davidaknowles/leafcutter"}, {"uid": "github/samuelyeewl/specmatch-emp", "html_url": "https://rseng.github.io/software/repository/github/samuelyeewl/specmatch-emp", "api_url": "https://rseng.github.io/software/api/repos/github/samuelyeewl/specmatch-emp"}, {"uid": "github/DLTK/DLTK", "html_url": "https://rseng.github.io/software/repository/github/DLTK/DLTK", "api_url": "https://rseng.github.io/software/api/repos/github/DLTK/DLTK"}, {"uid": "github/xiaochuanle/MECAT2", "html_url": "https://rseng.github.io/software/repository/github/xiaochuanle/MECAT2", "api_url": "https://rseng.github.io/software/api/repos/github/xiaochuanle/MECAT2"}, {"uid": "github/BattModels/asimtools", "html_url": "https://rseng.github.io/software/repository/github/BattModels/asimtools", "api_url": "https://rseng.github.io/software/api/repos/github/BattModels/asimtools"}, {"uid": "github/Kambrian/HBTplus", "html_url": "https://rseng.github.io/software/repository/github/Kambrian/HBTplus", "api_url": "https://rseng.github.io/software/api/repos/github/Kambrian/HBTplus"}, {"uid": "github/reneshbedre/bioinfokit", "html_url": "https://rseng.github.io/software/repository/github/reneshbedre/bioinfokit", "api_url": "https://rseng.github.io/software/api/repos/github/reneshbedre/bioinfokit"}, {"uid": "github/openmopac/MOPAC", "html_url": "https://rseng.github.io/software/repository/github/openmopac/MOPAC", "api_url": "https://rseng.github.io/software/api/repos/github/openmopac/MOPAC"}, {"uid": "github/RenneLab/hybkit", "html_url": "https://rseng.github.io/software/repository/github/RenneLab/hybkit", "api_url": "https://rseng.github.io/software/api/repos/github/RenneLab/hybkit"}, {"uid": "github/cole-trapnell-lab/monocle3", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/monocle3", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/monocle3"}, {"uid": "github/cole-trapnell-lab/cufflinks", "html_url": "https://rseng.github.io/software/repository/github/cole-trapnell-lab/cufflinks", "api_url": "https://rseng.github.io/software/api/repos/github/cole-trapnell-lab/cufflinks"}, {"uid": "github/neuralgraphs/diman", "html_url": "https://rseng.github.io/software/repository/github/neuralgraphs/diman", "api_url": "https://rseng.github.io/software/api/repos/github/neuralgraphs/diman"}, {"uid": "github/JLSteenwyk/ggpubfigs", "html_url": "https://rseng.github.io/software/repository/github/JLSteenwyk/ggpubfigs", "api_url": "https://rseng.github.io/software/api/repos/github/JLSteenwyk/ggpubfigs"}, {"uid": "github/JacobBumgarner/VesselVio", "html_url": "https://rseng.github.io/software/repository/github/JacobBumgarner/VesselVio", "api_url": "https://rseng.github.io/software/api/repos/github/JacobBumgarner/VesselVio"}, {"uid": "github/nanakiksc/zerone", "html_url": "https://rseng.github.io/software/repository/github/nanakiksc/zerone", "api_url": "https://rseng.github.io/software/api/repos/github/nanakiksc/zerone"}, {"uid": "github/CollinErickson/GauPro", "html_url": "https://rseng.github.io/software/repository/github/CollinErickson/GauPro", "api_url": "https://rseng.github.io/software/api/repos/github/CollinErickson/GauPro"}, {"uid": "github/Goobley/Radynversion", "html_url": "https://rseng.github.io/software/repository/github/Goobley/Radynversion", "api_url": "https://rseng.github.io/software/api/repos/github/Goobley/Radynversion"}, {"uid": "github/tcassanelli/pywpf", "html_url": "https://rseng.github.io/software/repository/github/tcassanelli/pywpf", "api_url": "https://rseng.github.io/software/api/repos/github/tcassanelli/pywpf"}, {"uid": "github/manulera/OpenCloning_frontend", "html_url": "https://rseng.github.io/software/repository/github/manulera/OpenCloning_frontend", "api_url": "https://rseng.github.io/software/api/repos/github/manulera/OpenCloning_frontend"}, {"uid": "github/ngltr/sinaps", "html_url": "https://rseng.github.io/software/repository/github/ngltr/sinaps", "api_url": "https://rseng.github.io/software/api/repos/github/ngltr/sinaps"}, {"uid": "github/lucadimascolo/socca", "html_url": "https://rseng.github.io/software/repository/github/lucadimascolo/socca", "api_url": "https://rseng.github.io/software/api/repos/github/lucadimascolo/socca"}, {"uid": "github/hugoledoux/startinpy", "html_url": "https://rseng.github.io/software/repository/github/hugoledoux/startinpy", "api_url": "https://rseng.github.io/software/api/repos/github/hugoledoux/startinpy"}, {"uid": "github/dpryan79/libBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/libBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/libBigWig"}, {"uid": "github/dpryan79/MethylDackel", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/MethylDackel", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/MethylDackel"}, {"uid": "github/dpryan79/pyBigWig", "html_url": "https://rseng.github.io/software/repository/github/dpryan79/pyBigWig", "api_url": "https://rseng.github.io/software/api/repos/github/dpryan79/pyBigWig"}, {"uid": "github/kiyo-masui/bitshuffle", "html_url": "https://rseng.github.io/software/repository/github/kiyo-masui/bitshuffle", "api_url": "https://rseng.github.io/software/api/repos/github/kiyo-masui/bitshuffle"}, {"uid": "github/sklasfeld/DANPOS3", "html_url": "https://rseng.github.io/software/repository/github/sklasfeld/DANPOS3", "api_url": "https://rseng.github.io/software/api/repos/github/sklasfeld/DANPOS3"}, {"uid": "github/yuliadm/mixComp", "html_url": "https://rseng.github.io/software/repository/github/yuliadm/mixComp", "api_url": "https://rseng.github.io/software/api/repos/github/yuliadm/mixComp"}, {"uid": "github/gavinsimpson/gratia", "html_url": "https://rseng.github.io/software/repository/github/gavinsimpson/gratia", "api_url": "https://rseng.github.io/software/api/repos/github/gavinsimpson/gratia"}, {"uid": "github/Rformassspectrometry/Spectra", "html_url": "https://rseng.github.io/software/repository/github/Rformassspectrometry/Spectra", "api_url": "https://rseng.github.io/software/api/repos/github/Rformassspectrometry/Spectra"}, {"uid": "github/aspuru-guzik-group/funsies", "html_url": "https://rseng.github.io/software/repository/github/aspuru-guzik-group/funsies", "api_url": "https://rseng.github.io/software/api/repos/github/aspuru-guzik-group/funsies"}, {"uid": "github/sncosmo/sncosmo", "html_url": "https://rseng.github.io/software/repository/github/sncosmo/sncosmo", "api_url": "https://rseng.github.io/software/api/repos/github/sncosmo/sncosmo"}, {"uid": "github/leirufeng/iEnhancer-DCSV", "html_url": "https://rseng.github.io/software/repository/github/leirufeng/iEnhancer-DCSV", "api_url": "https://rseng.github.io/software/api/repos/github/leirufeng/iEnhancer-DCSV"}, {"uid": "github/liniguez/Insplico_simulations", "html_url": "https://rseng.github.io/software/repository/github/liniguez/Insplico_simulations", "api_url": "https://rseng.github.io/software/api/repos/github/liniguez/Insplico_simulations"}, {"uid": "github/teoxxx/nemiss_pbl", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_pbl", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_pbl"}, {"uid": "github/teoxxx/nemiss_proper", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/nemiss_proper", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/nemiss_proper"}, {"uid": "github/teoxxx/rlos", "html_url": "https://rseng.github.io/software/repository/github/teoxxx/rlos", "api_url": "https://rseng.github.io/software/api/repos/github/teoxxx/rlos"}, {"uid": "github/agree019/DarkCapPy", "html_url": "https://rseng.github.io/software/repository/github/agree019/DarkCapPy", "api_url": "https://rseng.github.io/software/api/repos/github/agree019/DarkCapPy"}, {"uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeodynamics/GeophysicalModelGenerator.jl"}, {"uid": "github/tseemann/abricate", "html_url": "https://rseng.github.io/software/repository/github/tseemann/abricate", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/abricate"}, {"uid": "github/tseemann/VelvetOptimiser", "html_url": "https://rseng.github.io/software/repository/github/tseemann/VelvetOptimiser", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/VelvetOptimiser"}, {"uid": "github/tseemann/shovill", "html_url": "https://rseng.github.io/software/repository/github/tseemann/shovill", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/shovill"}, {"uid": "github/tseemann/mlst", "html_url": "https://rseng.github.io/software/repository/github/tseemann/mlst", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/mlst"}, {"uid": "github/tseemann/snippy", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snippy", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snippy"}, {"uid": "github/tseemann/prokka", "html_url": "https://rseng.github.io/software/repository/github/tseemann/prokka", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/prokka"}, {"uid": "github/tseemann/barrnap", "html_url": "https://rseng.github.io/software/repository/github/tseemann/barrnap", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/barrnap"}, {"uid": "github/tseemann/samclip", "html_url": "https://rseng.github.io/software/repository/github/tseemann/samclip", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/samclip"}, {"uid": "github/tseemann/snp-dists", "html_url": "https://rseng.github.io/software/repository/github/tseemann/snp-dists", "api_url": "https://rseng.github.io/software/api/repos/github/tseemann/snp-dists"}, {"uid": "github/cosmicrays/hermes", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/hermes", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/hermes"}, {"uid": "github/cosmicrays/DRAGON", "html_url": "https://rseng.github.io/software/repository/github/cosmicrays/DRAGON", "api_url": "https://rseng.github.io/software/api/repos/github/cosmicrays/DRAGON"}, {"uid": "github/kehrlab/PopDel", "html_url": "https://rseng.github.io/software/repository/github/kehrlab/PopDel", "api_url": "https://rseng.github.io/software/api/repos/github/kehrlab/PopDel"}, {"uid": "github/timahutchinson/redmonster", "html_url": "https://rseng.github.io/software/repository/github/timahutchinson/redmonster", "api_url": "https://rseng.github.io/software/api/repos/github/timahutchinson/redmonster"}, {"uid": "github/jgieseler/solarmach", "html_url": "https://rseng.github.io/software/repository/github/jgieseler/solarmach", "api_url": "https://rseng.github.io/software/api/repos/github/jgieseler/solarmach"}, {"uid": "github/brian-lau/MatlabAUC", "html_url": "https://rseng.github.io/software/repository/github/brian-lau/MatlabAUC", "api_url": "https://rseng.github.io/software/api/repos/github/brian-lau/MatlabAUC"}, {"uid": "github/Exo-TiC/ExoTiC-LD", "html_url": "https://rseng.github.io/software/repository/github/Exo-TiC/ExoTiC-LD", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-TiC/ExoTiC-LD"}, {"uid": "github/ranieremenezes/easyspec", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyspec", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyspec"}, {"uid": "github/ranieremenezes/easyFermi", "html_url": "https://rseng.github.io/software/repository/github/ranieremenezes/easyFermi", "api_url": "https://rseng.github.io/software/api/repos/github/ranieremenezes/easyFermi"}, {"uid": "github/franpoz/SHERLOCK", "html_url": "https://rseng.github.io/software/repository/github/franpoz/SHERLOCK", "api_url": "https://rseng.github.io/software/api/repos/github/franpoz/SHERLOCK"}, {"uid": "github/callendeprieto/ferre", "html_url": "https://rseng.github.io/software/repository/github/callendeprieto/ferre", "api_url": "https://rseng.github.io/software/api/repos/github/callendeprieto/ferre"}, {"uid": "github/zhwm/SparsePro_Paper", "html_url": "https://rseng.github.io/software/repository/github/zhwm/SparsePro_Paper", "api_url": "https://rseng.github.io/software/api/repos/github/zhwm/SparsePro_Paper"}, {"uid": "github/pasteurlabs/tesseract-core", "html_url": "https://rseng.github.io/software/repository/github/pasteurlabs/tesseract-core", "api_url": "https://rseng.github.io/software/api/repos/github/pasteurlabs/tesseract-core"}, {"uid": "github/MintonGroup/swiftest", "html_url": "https://rseng.github.io/software/repository/github/MintonGroup/swiftest", "api_url": "https://rseng.github.io/software/api/repos/github/MintonGroup/swiftest"}, {"uid": "github/alessiospuriomancini/cosmopower", "html_url": "https://rseng.github.io/software/repository/github/alessiospuriomancini/cosmopower", "api_url": "https://rseng.github.io/software/api/repos/github/alessiospuriomancini/cosmopower"}, {"uid": "github/IanevskiAleksandr/sc-type", "html_url": "https://rseng.github.io/software/repository/github/IanevskiAleksandr/sc-type", "api_url": "https://rseng.github.io/software/api/repos/github/IanevskiAleksandr/sc-type"}, {"uid": "github/LuShenJ/PyEMILI", "html_url": "https://rseng.github.io/software/repository/github/LuShenJ/PyEMILI", "api_url": "https://rseng.github.io/software/api/repos/github/LuShenJ/PyEMILI"}, {"uid": "github/mdolab/pygeo", "html_url": "https://rseng.github.io/software/repository/github/mdolab/pygeo", "api_url": "https://rseng.github.io/software/api/repos/github/mdolab/pygeo"}, {"uid": "github/WatsonGroupTCD/J2suscep", "html_url": "https://rseng.github.io/software/repository/github/WatsonGroupTCD/J2suscep", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonGroupTCD/J2suscep"}, {"uid": "github/ruta-k/uGMRT-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ruta-k/uGMRT-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ruta-k/uGMRT-pipeline"}, {"uid": "github/sheydenreich/threepoint", "html_url": "https://rseng.github.io/software/repository/github/sheydenreich/threepoint", "api_url": "https://rseng.github.io/software/api/repos/github/sheydenreich/threepoint"}, {"uid": "github/benallard/galileo", "html_url": "https://rseng.github.io/software/repository/github/benallard/galileo", "api_url": "https://rseng.github.io/software/api/repos/github/benallard/galileo"}, {"uid": "github/carnival-data/carnival", "html_url": "https://rseng.github.io/software/repository/github/carnival-data/carnival", "api_url": "https://rseng.github.io/software/api/repos/github/carnival-data/carnival"}, {"uid": "github/HCGB-IGTP/spaTyper", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/spaTyper", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/spaTyper"}, {"uid": "github/HCGB-IGTP/XICRA", "html_url": "https://rseng.github.io/software/repository/github/HCGB-IGTP/XICRA", "api_url": "https://rseng.github.io/software/api/repos/github/HCGB-IGTP/XICRA"}, {"uid": "github/delphes/delphes", "html_url": "https://rseng.github.io/software/repository/github/delphes/delphes", "api_url": "https://rseng.github.io/software/api/repos/github/delphes/delphes"}, {"uid": "github/JohannesBuchner/PyMultiNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/PyMultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/PyMultiNest"}, {"uid": "github/JohannesBuchner/nway", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/nway", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/nway"}, {"uid": "github/JohannesBuchner/BXA", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/BXA", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/BXA"}, {"uid": "github/JohannesBuchner/UltraNest", "html_url": "https://rseng.github.io/software/repository/github/JohannesBuchner/UltraNest", "api_url": "https://rseng.github.io/software/api/repos/github/JohannesBuchner/UltraNest"}, {"uid": "github/agnetelundgaard/BALDR", "html_url": "https://rseng.github.io/software/repository/github/agnetelundgaard/BALDR", "api_url": "https://rseng.github.io/software/api/repos/github/agnetelundgaard/BALDR"}, {"uid": "github/tyo-nu/pickaxe_paper", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/pickaxe_paper", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/pickaxe_paper"}, {"uid": "github/tyo-nu/MINE-app", "html_url": "https://rseng.github.io/software/repository/github/tyo-nu/MINE-app", "api_url": "https://rseng.github.io/software/api/repos/github/tyo-nu/MINE-app"}, {"uid": "github/mirochaj/sedop", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/sedop", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/sedop"}, {"uid": "github/mirochaj/ares", "html_url": "https://rseng.github.io/software/repository/github/mirochaj/ares", "api_url": "https://rseng.github.io/software/api/repos/github/mirochaj/ares"}, {"uid": "github/morispi/LRez", "html_url": "https://rseng.github.io/software/repository/github/morispi/LRez", "api_url": "https://rseng.github.io/software/api/repos/github/morispi/LRez"}, {"uid": "github/vhaasteren/piccard", "html_url": "https://rseng.github.io/software/repository/github/vhaasteren/piccard", "api_url": "https://rseng.github.io/software/api/repos/github/vhaasteren/piccard"}, {"uid": "github/lmfit/lmfit-py", "html_url": "https://rseng.github.io/software/repository/github/lmfit/lmfit-py", "api_url": "https://rseng.github.io/software/api/repos/github/lmfit/lmfit-py"}, {"uid": "github/younglab/origami", "html_url": "https://rseng.github.io/software/repository/github/younglab/origami", "api_url": "https://rseng.github.io/software/api/repos/github/younglab/origami"}, {"uid": "github/csmsoftware/IMPaCTS", "html_url": "https://rseng.github.io/software/repository/github/csmsoftware/IMPaCTS", "api_url": "https://rseng.github.io/software/api/repos/github/csmsoftware/IMPaCTS"}, {"uid": "github/DiseaseTranscriptomicsLab/scStudio", "html_url": "https://rseng.github.io/software/repository/github/DiseaseTranscriptomicsLab/scStudio", "api_url": "https://rseng.github.io/software/api/repos/github/DiseaseTranscriptomicsLab/scStudio"}, {"uid": "github/D-Crake/HEADSS", "html_url": "https://rseng.github.io/software/repository/github/D-Crake/HEADSS", "api_url": "https://rseng.github.io/software/api/repos/github/D-Crake/HEADSS"}, {"uid": "github/cblearn/cblearn", "html_url": "https://rseng.github.io/software/repository/github/cblearn/cblearn", "api_url": "https://rseng.github.io/software/api/repos/github/cblearn/cblearn"}, {"uid": "github/tpospisi/cdetools", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/cdetools", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/cdetools"}, {"uid": "github/tpospisi/nnkcde", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/nnkcde", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/nnkcde"}, {"uid": "github/tpospisi/RFCDE", "html_url": "https://rseng.github.io/software/repository/github/tpospisi/RFCDE", "api_url": "https://rseng.github.io/software/api/repos/github/tpospisi/RFCDE"}, {"uid": "github/sczesla/PyAstronomy", "html_url": "https://rseng.github.io/software/repository/github/sczesla/PyAstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sczesla/PyAstronomy"}, {"uid": "github/datalad/datalad", "html_url": "https://rseng.github.io/software/repository/github/datalad/datalad", "api_url": "https://rseng.github.io/software/api/repos/github/datalad/datalad"}, {"uid": "github/CAMI-challenge/AMBER", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/AMBER"}, {"uid": "github/CAMI-challenge/CAMITAX", "html_url": "https://rseng.github.io/software/repository/github/CAMI-challenge/CAMITAX", "api_url": "https://rseng.github.io/software/api/repos/github/CAMI-challenge/CAMITAX"}, {"uid": "github/MLMI2-CSSI/foundry", "html_url": "https://rseng.github.io/software/repository/github/MLMI2-CSSI/foundry", "api_url": "https://rseng.github.io/software/api/repos/github/MLMI2-CSSI/foundry"}, {"uid": "github/ImperialCollegeLondon/fractalgenetics", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/fractalgenetics", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/fractalgenetics"}, {"uid": "github/ImperialCollegeLondon/magda_tools", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/magda_tools", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/magda_tools"}, {"uid": "github/ImperialCollegeLondon/hcga", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/hcga", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/hcga"}, {"uid": "github/ImperialCollegeLondon/champ", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/champ", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/champ"}, {"uid": "github/ImperialCollegeLondon/rcs-pacemakers", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs-pacemakers"}, {"uid": "github/ImperialCollegeLondon/covid19model", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/covid19model", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/covid19model"}, {"uid": "github/ImperialCollegeLondon/ICLOCS", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/ICLOCS", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/ICLOCS"}, {"uid": "github/ImperialCollegeLondon/sharpy", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sharpy", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sharpy"}, {"uid": "github/ImperialCollegeLondon/SWMManywhere", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/SWMManywhere", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/SWMManywhere"}, {"uid": "github/ImperialCollegeLondon/safedata", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/safedata", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/safedata"}, {"uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/rcs_cluster_scripts"}, {"uid": "github/ImperialCollegeLondon/WInc3D", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/WInc3D", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/WInc3D"}, {"uid": "github/ImperialCollegeLondon/UVLM", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/UVLM", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/UVLM"}, {"uid": "github/ImperialCollegeLondon/pytest_template_application", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/pytest_template_application", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/pytest_template_application"}, {"uid": "github/ImperialCollegeLondon/sap-voicebox", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/sap-voicebox", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/sap-voicebox"}, {"uid": "github/ImperialCollegeLondon/EpiCollectplus", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/EpiCollectplus", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/EpiCollectplus"}, {"uid": "github/ImperialCollegeLondon/django-drf-filepond", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/django-drf-filepond", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/django-drf-filepond"}, {"uid": "github/ImperialCollegeLondon/PyProBE", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/PyProBE", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/PyProBE"}, {"uid": "github/ImperialCollegeLondon/research-software-directory-data", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/research-software-directory-data", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/research-software-directory-data"}, {"uid": "github/ImperialCollegeLondon/adam", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/adam", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/adam"}, {"uid": "github/ImperialCollegeLondon/R2T2", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/R2T2", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/R2T2"}, {"uid": "github/ImperialCollegeLondon/epidemia", "html_url": "https://rseng.github.io/software/repository/github/ImperialCollegeLondon/epidemia", "api_url": "https://rseng.github.io/software/api/repos/github/ImperialCollegeLondon/epidemia"}, {"uid": "github/C2SM-RCM/emiproc", "html_url": "https://rseng.github.io/software/repository/github/C2SM-RCM/emiproc", "api_url": "https://rseng.github.io/software/api/repos/github/C2SM-RCM/emiproc"}, {"uid": "github/antwiser/ChemFH", "html_url": "https://rseng.github.io/software/repository/github/antwiser/ChemFH", "api_url": "https://rseng.github.io/software/api/repos/github/antwiser/ChemFH"}, {"uid": "github/rhayes777/PyAutoFit", "html_url": "https://rseng.github.io/software/repository/github/rhayes777/PyAutoFit", "api_url": "https://rseng.github.io/software/api/repos/github/rhayes777/PyAutoFit"}, {"uid": "github/yiwenstat/MCPCA_PopGen", "html_url": "https://rseng.github.io/software/repository/github/yiwenstat/MCPCA_PopGen", "api_url": "https://rseng.github.io/software/api/repos/github/yiwenstat/MCPCA_PopGen"}, {"uid": "github/astromb/PICsar2D", "html_url": "https://rseng.github.io/software/repository/github/astromb/PICsar2D", "api_url": "https://rseng.github.io/software/api/repos/github/astromb/PICsar2D"}, {"uid": "github/wal-yan/target-methylseq-qc", "html_url": "https://rseng.github.io/software/repository/github/wal-yan/target-methylseq-qc", "api_url": "https://rseng.github.io/software/api/repos/github/wal-yan/target-methylseq-qc"}, {"uid": "github/mlafarga/raccoon", "html_url": "https://rseng.github.io/software/repository/github/mlafarga/raccoon", "api_url": "https://rseng.github.io/software/api/repos/github/mlafarga/raccoon"}, {"uid": "github/barnesgroupICL/Driftfusion", "html_url": "https://rseng.github.io/software/repository/github/barnesgroupICL/Driftfusion", "api_url": "https://rseng.github.io/software/api/repos/github/barnesgroupICL/Driftfusion"}, {"uid": "github/reznik-lab/MIRTH", "html_url": "https://rseng.github.io/software/repository/github/reznik-lab/MIRTH", "api_url": "https://rseng.github.io/software/api/repos/github/reznik-lab/MIRTH"}, {"uid": "github/roban/CosmoloPy", "html_url": "https://rseng.github.io/software/repository/github/roban/CosmoloPy", "api_url": "https://rseng.github.io/software/api/repos/github/roban/CosmoloPy"}, {"uid": "github/soilwater/crnpy", "html_url": "https://rseng.github.io/software/repository/github/soilwater/crnpy", "api_url": "https://rseng.github.io/software/api/repos/github/soilwater/crnpy"}, {"uid": "github/DZeevi-Lab/TinkerHap", "html_url": "https://rseng.github.io/software/repository/github/DZeevi-Lab/TinkerHap", "api_url": "https://rseng.github.io/software/api/repos/github/DZeevi-Lab/TinkerHap"}, {"uid": "github/nugent-lab/FindPOTATOS-stable", "html_url": "https://rseng.github.io/software/repository/github/nugent-lab/FindPOTATOS-stable", "api_url": "https://rseng.github.io/software/api/repos/github/nugent-lab/FindPOTATOS-stable"}, {"uid": "github/BigDataBiology/argNorm", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/argNorm", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/argNorm"}, {"uid": "github/BigDataBiology/macrel", "html_url": "https://rseng.github.io/software/repository/github/BigDataBiology/macrel", "api_url": "https://rseng.github.io/software/api/repos/github/BigDataBiology/macrel"}, {"uid": "github/jaimerzp/limberjack.jl", "html_url": "https://rseng.github.io/software/repository/github/jaimerzp/limberjack.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jaimerzp/limberjack.jl"}, {"uid": "github/jlenain/flaapluc", "html_url": "https://rseng.github.io/software/repository/github/jlenain/flaapluc", "api_url": "https://rseng.github.io/software/api/repos/github/jlenain/flaapluc"}, {"uid": "github/jolie/tquery", "html_url": "https://rseng.github.io/software/repository/github/jolie/tquery", "api_url": "https://rseng.github.io/software/api/repos/github/jolie/tquery"}, {"uid": "github/AshleySpindler/AstroVaDEr-Public", "html_url": "https://rseng.github.io/software/repository/github/AshleySpindler/AstroVaDEr-Public", "api_url": "https://rseng.github.io/software/api/repos/github/AshleySpindler/AstroVaDEr-Public"}, {"uid": "github/semaphoreP/whereistheplanet", "html_url": "https://rseng.github.io/software/repository/github/semaphoreP/whereistheplanet", "api_url": "https://rseng.github.io/software/api/repos/github/semaphoreP/whereistheplanet"}, {"uid": "github/rgcgithub/regenie", "html_url": "https://rseng.github.io/software/repository/github/rgcgithub/regenie", "api_url": "https://rseng.github.io/software/api/repos/github/rgcgithub/regenie"}, {"uid": "github/astrosupriyo/pyTANSPEC", "html_url": "https://rseng.github.io/software/repository/github/astrosupriyo/pyTANSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/astrosupriyo/pyTANSPEC"}, {"uid": "github/amberbiology/scribl", "html_url": "https://rseng.github.io/software/repository/github/amberbiology/scribl", "api_url": "https://rseng.github.io/software/api/repos/github/amberbiology/scribl"}, {"uid": "github/taehoryu/TDEmass", "html_url": "https://rseng.github.io/software/repository/github/taehoryu/TDEmass", "api_url": "https://rseng.github.io/software/api/repos/github/taehoryu/TDEmass"}, {"uid": "github/e-merlin/eMERLIN_CASA_pipeline", "html_url": "https://rseng.github.io/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/e-merlin/eMERLIN_CASA_pipeline"}, {"uid": "github/bedops/bedops", "html_url": "https://rseng.github.io/software/repository/github/bedops/bedops", "api_url": "https://rseng.github.io/software/api/repos/github/bedops/bedops"}, {"uid": "github/kimpenn/VERSE", "html_url": "https://rseng.github.io/software/repository/github/kimpenn/VERSE", "api_url": "https://rseng.github.io/software/api/repos/github/kimpenn/VERSE"}, {"uid": "github/SebOliver/PCA", "html_url": "https://rseng.github.io/software/repository/github/SebOliver/PCA", "api_url": "https://rseng.github.io/software/api/repos/github/SebOliver/PCA"}, {"uid": "github/GalacticDynamics/unxt", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics/unxt", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics/unxt"}, {"uid": "github/HaowenZhang/TRINITY", "html_url": "https://rseng.github.io/software/repository/github/HaowenZhang/TRINITY", "api_url": "https://rseng.github.io/software/api/repos/github/HaowenZhang/TRINITY"}, {"uid": "github/barnabytprowe/imcom", "html_url": "https://rseng.github.io/software/repository/github/barnabytprowe/imcom", "api_url": "https://rseng.github.io/software/api/repos/github/barnabytprowe/imcom"}, {"uid": "github/inigozubeldia/cosmocnc", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/cosmocnc", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/cosmocnc"}, {"uid": "github/inigozubeldia/szifi", "html_url": "https://rseng.github.io/software/repository/github/inigozubeldia/szifi", "api_url": "https://rseng.github.io/software/api/repos/github/inigozubeldia/szifi"}, {"uid": "github/dynamics-of-stellar-systems/dynamite_release", "html_url": "https://rseng.github.io/software/repository/github/dynamics-of-stellar-systems/dynamite_release", "api_url": "https://rseng.github.io/software/api/repos/github/dynamics-of-stellar-systems/dynamite_release"}, {"uid": "github/bwkeller/PASTA", "html_url": "https://rseng.github.io/software/repository/github/bwkeller/PASTA", "api_url": "https://rseng.github.io/software/api/repos/github/bwkeller/PASTA"}, {"uid": "github/jupyter/notebook", "html_url": "https://rseng.github.io/software/repository/github/jupyter/notebook", "api_url": "https://rseng.github.io/software/api/repos/github/jupyter/notebook"}, {"uid": "github/maxpumperla/hyperas", "html_url": "https://rseng.github.io/software/repository/github/maxpumperla/hyperas", "api_url": "https://rseng.github.io/software/api/repos/github/maxpumperla/hyperas"}, {"uid": "github/ryanhausen/fitsmap", "html_url": "https://rseng.github.io/software/repository/github/ryanhausen/fitsmap", "api_url": "https://rseng.github.io/software/api/repos/github/ryanhausen/fitsmap"}, {"uid": "github/GregoryFaust/samblaster", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/samblaster", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/samblaster"}, {"uid": "github/GregoryFaust/yaha", "html_url": "https://rseng.github.io/software/repository/github/GregoryFaust/yaha", "api_url": "https://rseng.github.io/software/api/repos/github/GregoryFaust/yaha"}, {"uid": "github/daddeptr/Needlets", "html_url": "https://rseng.github.io/software/repository/github/daddeptr/Needlets", "api_url": "https://rseng.github.io/software/api/repos/github/daddeptr/Needlets"}, {"uid": "github/MFaymon/spINAR", "html_url": "https://rseng.github.io/software/repository/github/MFaymon/spINAR", "api_url": "https://rseng.github.io/software/api/repos/github/MFaymon/spINAR"}, {"uid": "github/lasseignelab/CINmetrics", "html_url": "https://rseng.github.io/software/repository/github/lasseignelab/CINmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/lasseignelab/CINmetrics"}, {"uid": "github/ThomasBakx/cobra", "html_url": "https://rseng.github.io/software/repository/github/ThomasBakx/cobra", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasBakx/cobra"}, {"uid": "github/jlillo/tpfplotter", "html_url": "https://rseng.github.io/software/repository/github/jlillo/tpfplotter", "api_url": "https://rseng.github.io/software/api/repos/github/jlillo/tpfplotter"}, {"uid": "github/wcxve/elisa", "html_url": "https://rseng.github.io/software/repository/github/wcxve/elisa", "api_url": "https://rseng.github.io/software/api/repos/github/wcxve/elisa"}, {"uid": "github/coleygroup/pyscreener", "html_url": "https://rseng.github.io/software/repository/github/coleygroup/pyscreener", "api_url": "https://rseng.github.io/software/api/repos/github/coleygroup/pyscreener"}, {"uid": "github/alexriss/SpmImageTycoon.jl", "html_url": "https://rseng.github.io/software/repository/github/alexriss/SpmImageTycoon.jl", "api_url": "https://rseng.github.io/software/api/repos/github/alexriss/SpmImageTycoon.jl"}, {"uid": "github/nservant/HiC-Pro", "html_url": "https://rseng.github.io/software/repository/github/nservant/HiC-Pro", "api_url": "https://rseng.github.io/software/api/repos/github/nservant/HiC-Pro"}, {"uid": "github/weizhongli/cdhit", "html_url": "https://rseng.github.io/software/repository/github/weizhongli/cdhit", "api_url": "https://rseng.github.io/software/api/repos/github/weizhongli/cdhit"}, {"uid": "github/KostasValeckas/PyLongslit", "html_url": "https://rseng.github.io/software/repository/github/KostasValeckas/PyLongslit", "api_url": "https://rseng.github.io/software/api/repos/github/KostasValeckas/PyLongslit"}, {"uid": "github/Peppags/CNN-SVR", "html_url": "https://rseng.github.io/software/repository/github/Peppags/CNN-SVR", "api_url": "https://rseng.github.io/software/api/repos/github/Peppags/CNN-SVR"}, {"uid": "github/hope-data-science/tidyfst", "html_url": "https://rseng.github.io/software/repository/github/hope-data-science/tidyfst", "api_url": "https://rseng.github.io/software/api/repos/github/hope-data-science/tidyfst"}, {"uid": "github/kellino/DiscreteEntropy.jl", "html_url": "https://rseng.github.io/software/repository/github/kellino/DiscreteEntropy.jl", "api_url": "https://rseng.github.io/software/api/repos/github/kellino/DiscreteEntropy.jl"}, {"uid": "github/rzellem/EXOTIC", "html_url": "https://rseng.github.io/software/repository/github/rzellem/EXOTIC", "api_url": "https://rseng.github.io/software/api/repos/github/rzellem/EXOTIC"}, {"uid": "github/AsterLight0626/Twinkle", "html_url": "https://rseng.github.io/software/repository/github/AsterLight0626/Twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/AsterLight0626/Twinkle"}, {"uid": "github/galaxyecology/tools-ecology", "html_url": "https://rseng.github.io/software/repository/github/galaxyecology/tools-ecology", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyecology/tools-ecology"}, {"uid": "github/TBLabFJD/WHALE", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/WHALE", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/WHALE"}, {"uid": "github/TBLabFJD/VariantCallingFJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/VariantCallingFJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/VariantCallingFJD"}, {"uid": "github/TBLabFJD/DBofAFs", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/DBofAFs", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/DBofAFs"}, {"uid": "github/TBLabFJD/PARROT-FJD", "html_url": "https://rseng.github.io/software/repository/github/TBLabFJD/PARROT-FJD", "api_url": "https://rseng.github.io/software/api/repos/github/TBLabFJD/PARROT-FJD"}, {"uid": "github/LiberTEM/LiberTEM", "html_url": "https://rseng.github.io/software/repository/github/LiberTEM/LiberTEM", "api_url": "https://rseng.github.io/software/api/repos/github/LiberTEM/LiberTEM"}, {"uid": "github/darrencroton/sage", "html_url": "https://rseng.github.io/software/repository/github/darrencroton/sage", "api_url": "https://rseng.github.io/software/api/repos/github/darrencroton/sage"}, {"uid": "github/moble/GWFrames", "html_url": "https://rseng.github.io/software/repository/github/moble/GWFrames", "api_url": "https://rseng.github.io/software/api/repos/github/moble/GWFrames"}, {"uid": "github/moble/scri", "html_url": "https://rseng.github.io/software/repository/github/moble/scri", "api_url": "https://rseng.github.io/software/api/repos/github/moble/scri"}, {"uid": "github/xdqso/xdqso", "html_url": "https://rseng.github.io/software/repository/github/xdqso/xdqso", "api_url": "https://rseng.github.io/software/api/repos/github/xdqso/xdqso"}, {"uid": "github/koide3/small_gicp", "html_url": "https://rseng.github.io/software/repository/github/koide3/small_gicp", "api_url": "https://rseng.github.io/software/api/repos/github/koide3/small_gicp"}, {"uid": "github/padster/pyNeuroTrace", "html_url": "https://rseng.github.io/software/repository/github/padster/pyNeuroTrace", "api_url": "https://rseng.github.io/software/api/repos/github/padster/pyNeuroTrace"}, {"uid": "github/fhcrc/seqmagick", "html_url": "https://rseng.github.io/software/repository/github/fhcrc/seqmagick", "api_url": "https://rseng.github.io/software/api/repos/github/fhcrc/seqmagick"}, {"uid": "github/swiss-armed-forces/openburst", "html_url": "https://rseng.github.io/software/repository/github/swiss-armed-forces/openburst", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-armed-forces/openburst"}, {"uid": "github/bmvdgeijn/WASP", "html_url": "https://rseng.github.io/software/repository/github/bmvdgeijn/WASP", "api_url": "https://rseng.github.io/software/api/repos/github/bmvdgeijn/WASP"}, {"uid": "github/bramvandijk88/cacatoo", "html_url": "https://rseng.github.io/software/repository/github/bramvandijk88/cacatoo", "api_url": "https://rseng.github.io/software/api/repos/github/bramvandijk88/cacatoo"}, {"uid": "github/hpgem/nanomesh", "html_url": "https://rseng.github.io/software/repository/github/hpgem/nanomesh", "api_url": "https://rseng.github.io/software/api/repos/github/hpgem/nanomesh"}, {"uid": "github/GaetanBenoitDev/metaMDBG", "html_url": "https://rseng.github.io/software/repository/github/GaetanBenoitDev/metaMDBG", "api_url": "https://rseng.github.io/software/api/repos/github/GaetanBenoitDev/metaMDBG"}, {"uid": "github/OSeMOSYS/otoole", "html_url": "https://rseng.github.io/software/repository/github/OSeMOSYS/otoole", "api_url": "https://rseng.github.io/software/api/repos/github/OSeMOSYS/otoole"}, {"uid": "github/vergauwenthomas/MetObs_toolkit", "html_url": "https://rseng.github.io/software/repository/github/vergauwenthomas/MetObs_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/vergauwenthomas/MetObs_toolkit"}, {"uid": "github/plazar/coast_guard", "html_url": "https://rseng.github.io/software/repository/github/plazar/coast_guard", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/coast_guard"}, {"uid": "github/plazar/TOASTER", "html_url": "https://rseng.github.io/software/repository/github/plazar/TOASTER", "api_url": "https://rseng.github.io/software/api/repos/github/plazar/TOASTER"}, {"uid": "github/palaeoware/trevosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/trevosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/trevosim"}, {"uid": "github/palaeoware/revosim", "html_url": "https://rseng.github.io/software/repository/github/palaeoware/revosim", "api_url": "https://rseng.github.io/software/api/repos/github/palaeoware/revosim"}, {"uid": "github/CisnerosResearch/LICHEM", "html_url": "https://rseng.github.io/software/repository/github/CisnerosResearch/LICHEM", "api_url": "https://rseng.github.io/software/api/repos/github/CisnerosResearch/LICHEM"}, {"uid": "github/ACEnglish/truvari", "html_url": "https://rseng.github.io/software/repository/github/ACEnglish/truvari", "api_url": "https://rseng.github.io/software/api/repos/github/ACEnglish/truvari"}, {"uid": "github/SJTU-CGM/ivTerm", "html_url": "https://rseng.github.io/software/repository/github/SJTU-CGM/ivTerm", "api_url": "https://rseng.github.io/software/api/repos/github/SJTU-CGM/ivTerm"}, {"uid": "github/kushaltirumala/WaldoInSky", "html_url": "https://rseng.github.io/software/repository/github/kushaltirumala/WaldoInSky", "api_url": "https://rseng.github.io/software/api/repos/github/kushaltirumala/WaldoInSky"}, {"uid": "github/pkgw/pwkit", "html_url": "https://rseng.github.io/software/repository/github/pkgw/pwkit", "api_url": "https://rseng.github.io/software/api/repos/github/pkgw/pwkit"}, {"uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "html_url": "https://rseng.github.io/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", "api_url": "https://rseng.github.io/software/api/repos/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-"}, {"uid": "github/BU-hammerTeam/PyHammer", "html_url": "https://rseng.github.io/software/repository/github/BU-hammerTeam/PyHammer", "api_url": "https://rseng.github.io/software/api/repos/github/BU-hammerTeam/PyHammer"}, {"uid": "github/llt1836/TE-HI-GCN", "html_url": "https://rseng.github.io/software/repository/github/llt1836/TE-HI-GCN", "api_url": "https://rseng.github.io/software/api/repos/github/llt1836/TE-HI-GCN"}, {"uid": "github/SNEWS2/snewpy", "html_url": "https://rseng.github.io/software/repository/github/SNEWS2/snewpy", "api_url": "https://rseng.github.io/software/api/repos/github/SNEWS2/snewpy"}, {"uid": "github/beckrob/Photo-z-SQL", "html_url": "https://rseng.github.io/software/repository/github/beckrob/Photo-z-SQL", "api_url": "https://rseng.github.io/software/api/repos/github/beckrob/Photo-z-SQL"}, {"uid": "github/DKMS/hapl-o-Mat_WinBin", "html_url": "https://rseng.github.io/software/repository/github/DKMS/hapl-o-Mat_WinBin", "api_url": "https://rseng.github.io/software/api/repos/github/DKMS/hapl-o-Mat_WinBin"}, {"uid": "github/febos/SQUARNA", "html_url": "https://rseng.github.io/software/repository/github/febos/SQUARNA", "api_url": "https://rseng.github.io/software/api/repos/github/febos/SQUARNA"}, {"uid": "github/mayuresh159/starsense_algorithms", "html_url": "https://rseng.github.io/software/repository/github/mayuresh159/starsense_algorithms", "api_url": "https://rseng.github.io/software/api/repos/github/mayuresh159/starsense_algorithms"}, {"uid": "github/johannesulf/dsigma", "html_url": "https://rseng.github.io/software/repository/github/johannesulf/dsigma", "api_url": "https://rseng.github.io/software/api/repos/github/johannesulf/dsigma"}, {"uid": "github/tobias-dv-lnu/s4rdm3x", "html_url": "https://rseng.github.io/software/repository/github/tobias-dv-lnu/s4rdm3x", "api_url": "https://rseng.github.io/software/api/repos/github/tobias-dv-lnu/s4rdm3x"}, {"uid": "github/tdrobinson/coronagraph_noise", "html_url": "https://rseng.github.io/software/repository/github/tdrobinson/coronagraph_noise", "api_url": "https://rseng.github.io/software/api/repos/github/tdrobinson/coronagraph_noise"}, {"uid": "github/calboo/Potential_Field_Calculator", "html_url": "https://rseng.github.io/software/repository/github/calboo/Potential_Field_Calculator", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/Potential_Field_Calculator"}, {"uid": "github/calboo/TAWAS", "html_url": "https://rseng.github.io/software/repository/github/calboo/TAWAS", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/TAWAS"}, {"uid": "github/calboo/wigglewave", "html_url": "https://rseng.github.io/software/repository/github/calboo/wigglewave", "api_url": "https://rseng.github.io/software/api/repos/github/calboo/wigglewave"}, {"uid": "github/NCAS-CMS/cfdm", "html_url": "https://rseng.github.io/software/repository/github/NCAS-CMS/cfdm", "api_url": "https://rseng.github.io/software/api/repos/github/NCAS-CMS/cfdm"}, {"uid": "github/popgenmethods/smcpp", "html_url": "https://rseng.github.io/software/repository/github/popgenmethods/smcpp", "api_url": "https://rseng.github.io/software/api/repos/github/popgenmethods/smcpp"}, {"uid": "github/pyBRAvo/pyBRAvo", "html_url": "https://rseng.github.io/software/repository/github/pyBRAvo/pyBRAvo", "api_url": "https://rseng.github.io/software/api/repos/github/pyBRAvo/pyBRAvo"}, {"uid": "github/linuxscout/pyarabic", "html_url": "https://rseng.github.io/software/repository/github/linuxscout/pyarabic", "api_url": "https://rseng.github.io/software/api/repos/github/linuxscout/pyarabic"}, {"uid": "github/gheald/rmclean", "html_url": "https://rseng.github.io/software/repository/github/gheald/rmclean", "api_url": "https://rseng.github.io/software/api/repos/github/gheald/rmclean"}, {"uid": "github/alexander-shen/rtest", "html_url": "https://rseng.github.io/software/repository/github/alexander-shen/rtest", "api_url": "https://rseng.github.io/software/api/repos/github/alexander-shen/rtest"}, {"uid": "github/gadomski/antimeridian", "html_url": "https://rseng.github.io/software/repository/github/gadomski/antimeridian", "api_url": "https://rseng.github.io/software/api/repos/github/gadomski/antimeridian"}, {"uid": "github/ParisAstronomicalDataCentre/OPUS", "html_url": "https://rseng.github.io/software/repository/github/ParisAstronomicalDataCentre/OPUS", "api_url": "https://rseng.github.io/software/api/repos/github/ParisAstronomicalDataCentre/OPUS"}, {"uid": "github/francescodc87/ipaPy2", "html_url": "https://rseng.github.io/software/repository/github/francescodc87/ipaPy2", "api_url": "https://rseng.github.io/software/api/repos/github/francescodc87/ipaPy2"}, {"uid": "github/Johannes-Sahlmann/pygacs", "html_url": "https://rseng.github.io/software/repository/github/Johannes-Sahlmann/pygacs", "api_url": "https://rseng.github.io/software/api/repos/github/Johannes-Sahlmann/pygacs"}, {"uid": "github/jgducoin/galclaim", "html_url": "https://rseng.github.io/software/repository/github/jgducoin/galclaim", "api_url": "https://rseng.github.io/software/api/repos/github/jgducoin/galclaim"}, {"uid": "github/JanCBrammer/biopeaks", "html_url": "https://rseng.github.io/software/repository/github/JanCBrammer/biopeaks", "api_url": "https://rseng.github.io/software/api/repos/github/JanCBrammer/biopeaks"}, {"uid": "github/coljac/sensie", "html_url": "https://rseng.github.io/software/repository/github/coljac/sensie", "api_url": "https://rseng.github.io/software/api/repos/github/coljac/sensie"}, {"uid": "github/nppackages/lpcde", "html_url": "https://rseng.github.io/software/repository/github/nppackages/lpcde", "api_url": "https://rseng.github.io/software/api/repos/github/nppackages/lpcde"}, {"uid": "github/ivadomed/ivadomed", "html_url": "https://rseng.github.io/software/repository/github/ivadomed/ivadomed", "api_url": "https://rseng.github.io/software/api/repos/github/ivadomed/ivadomed"}, {"uid": "github/spedas/pyspedas", "html_url": "https://rseng.github.io/software/repository/github/spedas/pyspedas", "api_url": "https://rseng.github.io/software/api/repos/github/spedas/pyspedas"}, {"uid": "github/pyroll-project/pyroll-core", "html_url": "https://rseng.github.io/software/repository/github/pyroll-project/pyroll-core", "api_url": "https://rseng.github.io/software/api/repos/github/pyroll-project/pyroll-core"}, {"uid": "github/JamesPaynter/PyGRB", "html_url": "https://rseng.github.io/software/repository/github/JamesPaynter/PyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/JamesPaynter/PyGRB"}, {"uid": "github/spglib/spgrep", "html_url": "https://rseng.github.io/software/repository/github/spglib/spgrep", "api_url": "https://rseng.github.io/software/api/repos/github/spglib/spgrep"}, {"uid": "github/finsberg/fenicsx-beat", "html_url": "https://rseng.github.io/software/repository/github/finsberg/fenicsx-beat", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/fenicsx-beat"}, {"uid": "github/finsberg/gotranx", "html_url": "https://rseng.github.io/software/repository/github/finsberg/gotranx", "api_url": "https://rseng.github.io/software/api/repos/github/finsberg/gotranx"}, {"uid": "github/statdivlab/rigr", "html_url": "https://rseng.github.io/software/repository/github/statdivlab/rigr", "api_url": "https://rseng.github.io/software/api/repos/github/statdivlab/rigr"}, {"uid": "github/zizroc/villager", "html_url": "https://rseng.github.io/software/repository/github/zizroc/villager", "api_url": "https://rseng.github.io/software/api/repos/github/zizroc/villager"}, {"uid": "github/shenlab-sinai/ngsplot", "html_url": "https://rseng.github.io/software/repository/github/shenlab-sinai/ngsplot", "api_url": "https://rseng.github.io/software/api/repos/github/shenlab-sinai/ngsplot"}, {"uid": "github/ddarriba/prottest3", "html_url": "https://rseng.github.io/software/repository/github/ddarriba/prottest3", "api_url": "https://rseng.github.io/software/api/repos/github/ddarriba/prottest3"}, {"uid": "github/awmann/M_-M_K-", "html_url": "https://rseng.github.io/software/repository/github/awmann/M_-M_K-", "api_url": "https://rseng.github.io/software/api/repos/github/awmann/M_-M_K-"}, {"uid": "github/18parkky/NanoMnT", "html_url": "https://rseng.github.io/software/repository/github/18parkky/NanoMnT", "api_url": "https://rseng.github.io/software/api/repos/github/18parkky/NanoMnT"}, {"uid": "github/hillerlab/GenomeAlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/hillerlab/GenomeAlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/hillerlab/GenomeAlignmentTools"}, {"uid": "github/lucianolorenti/ceruleo", "html_url": "https://rseng.github.io/software/repository/github/lucianolorenti/ceruleo", "api_url": "https://rseng.github.io/software/api/repos/github/lucianolorenti/ceruleo"}, {"uid": "github/EvolOMICS-TU/ETENLNC", "html_url": "https://rseng.github.io/software/repository/github/EvolOMICS-TU/ETENLNC", "api_url": "https://rseng.github.io/software/api/repos/github/EvolOMICS-TU/ETENLNC"}, {"uid": "github/deephyper/deephyper", "html_url": "https://rseng.github.io/software/repository/github/deephyper/deephyper", "api_url": "https://rseng.github.io/software/api/repos/github/deephyper/deephyper"}, {"uid": "github/conchoecia/pauvre", "html_url": "https://rseng.github.io/software/repository/github/conchoecia/pauvre", "api_url": "https://rseng.github.io/software/api/repos/github/conchoecia/pauvre"}, {"uid": "github/franciscozorrilla/metaGEM", "html_url": "https://rseng.github.io/software/repository/github/franciscozorrilla/metaGEM", "api_url": "https://rseng.github.io/software/api/repos/github/franciscozorrilla/metaGEM"}, {"uid": "github/mmollina/viewpoly", "html_url": "https://rseng.github.io/software/repository/github/mmollina/viewpoly", "api_url": "https://rseng.github.io/software/api/repos/github/mmollina/viewpoly"}, {"uid": "github/netsiphd/netrd", "html_url": "https://rseng.github.io/software/repository/github/netsiphd/netrd", "api_url": "https://rseng.github.io/software/api/repos/github/netsiphd/netrd"}, {"uid": "github/sciapp/sampledb", "html_url": "https://rseng.github.io/software/repository/github/sciapp/sampledb", "api_url": "https://rseng.github.io/software/api/repos/github/sciapp/sampledb"}, {"uid": "github/genome/bam-readcount", "html_url": "https://rseng.github.io/software/repository/github/genome/bam-readcount", "api_url": "https://rseng.github.io/software/api/repos/github/genome/bam-readcount"}, {"uid": "github/genome/somatic-sniper", "html_url": "https://rseng.github.io/software/repository/github/genome/somatic-sniper", "api_url": "https://rseng.github.io/software/api/repos/github/genome/somatic-sniper"}, {"uid": "github/jtschindler/sculptor", "html_url": "https://rseng.github.io/software/repository/github/jtschindler/sculptor", "api_url": "https://rseng.github.io/software/api/repos/github/jtschindler/sculptor"}, {"uid": "github/stevertaylor/gw_pta_emulator", "html_url": "https://rseng.github.io/software/repository/github/stevertaylor/gw_pta_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/stevertaylor/gw_pta_emulator"}, {"uid": "github/kokkos/kokkos-fft", "html_url": "https://rseng.github.io/software/repository/github/kokkos/kokkos-fft", "api_url": "https://rseng.github.io/software/api/repos/github/kokkos/kokkos-fft"}, {"uid": "github/j-erler/pymf", "html_url": "https://rseng.github.io/software/repository/github/j-erler/pymf", "api_url": "https://rseng.github.io/software/api/repos/github/j-erler/pymf"}, {"uid": "github/CFSAN-Biostatistics/SeroTools", "html_url": "https://rseng.github.io/software/repository/github/CFSAN-Biostatistics/SeroTools", "api_url": "https://rseng.github.io/software/api/repos/github/CFSAN-Biostatistics/SeroTools"}, {"uid": "github/jordanlab/STing", "html_url": "https://rseng.github.io/software/repository/github/jordanlab/STing", "api_url": "https://rseng.github.io/software/api/repos/github/jordanlab/STing"}, {"uid": "github/JorenSix/Panako", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Panako", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Panako"}, {"uid": "github/JorenSix/Olaf", "html_url": "https://rseng.github.io/software/repository/github/JorenSix/Olaf", "api_url": "https://rseng.github.io/software/api/repos/github/JorenSix/Olaf"}, {"uid": "github/msyazwanfaid/hilalimagingdataextraction", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalimagingdataextraction", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalimagingdataextraction"}, {"uid": "github/msyazwanfaid/hilalpy", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/hilalpy", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/hilalpy"}, {"uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "html_url": "https://rseng.github.io/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", "api_url": "https://rseng.github.io/software/api/repos/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report"}, {"uid": "github/bokeh/bokeh", "html_url": "https://rseng.github.io/software/repository/github/bokeh/bokeh", "api_url": "https://rseng.github.io/software/api/repos/github/bokeh/bokeh"}, {"uid": "github/sefffal/Octofitter.jl", "html_url": "https://rseng.github.io/software/repository/github/sefffal/Octofitter.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sefffal/Octofitter.jl"}, {"uid": "github/saberyoung/haffet", "html_url": "https://rseng.github.io/software/repository/github/saberyoung/haffet", "api_url": "https://rseng.github.io/software/api/repos/github/saberyoung/haffet"}, {"uid": "github/arielmission-space/PAOS", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/PAOS", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/PAOS"}, {"uid": "github/arielmission-space/ExoSim2-public", "html_url": "https://rseng.github.io/software/repository/github/arielmission-space/ExoSim2-public", "api_url": "https://rseng.github.io/software/api/repos/github/arielmission-space/ExoSim2-public"}, {"uid": "github/IslasGECI/nerd", "html_url": "https://rseng.github.io/software/repository/github/IslasGECI/nerd", "api_url": "https://rseng.github.io/software/api/repos/github/IslasGECI/nerd"}, {"uid": "github/agerada/AIgarMIC", "html_url": "https://rseng.github.io/software/repository/github/agerada/AIgarMIC", "api_url": "https://rseng.github.io/software/api/repos/github/agerada/AIgarMIC"}, {"uid": "github/JuliaDiff/ForwardDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ForwardDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ForwardDiff.jl"}, {"uid": "github/JuliaDiff/ReverseDiff.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDiff/ReverseDiff.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDiff/ReverseDiff.jl"}, {"uid": "github/Incpink-Liu/DNA-storage-R_plus", "html_url": "https://rseng.github.io/software/repository/github/Incpink-Liu/DNA-storage-R_plus", "api_url": "https://rseng.github.io/software/api/repos/github/Incpink-Liu/DNA-storage-R_plus"}, {"uid": "github/lskatz/SneakerNet", "html_url": "https://rseng.github.io/software/repository/github/lskatz/SneakerNet", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/SneakerNet"}, {"uid": "github/lskatz/fasten", "html_url": "https://rseng.github.io/software/repository/github/lskatz/fasten", "api_url": "https://rseng.github.io/software/api/repos/github/lskatz/fasten"}, {"uid": "github/dentalfloss1/transients-simulations", "html_url": "https://rseng.github.io/software/repository/github/dentalfloss1/transients-simulations", "api_url": "https://rseng.github.io/software/api/repos/github/dentalfloss1/transients-simulations"}, {"uid": "github/aliojjati/MGCAMB", "html_url": "https://rseng.github.io/software/repository/github/aliojjati/MGCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/aliojjati/MGCAMB"}, {"uid": "github/miguelzuma/hi_class_public", "html_url": "https://rseng.github.io/software/repository/github/miguelzuma/hi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/miguelzuma/hi_class_public"}, {"uid": "github/cnes/EleFits", "html_url": "https://rseng.github.io/software/repository/github/cnes/EleFits", "api_url": "https://rseng.github.io/software/api/repos/github/cnes/EleFits"}, {"uid": "github/pmvreeswijk/BlackBOX", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/BlackBOX", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/BlackBOX"}, {"uid": "github/pmvreeswijk/ZOGY", "html_url": "https://rseng.github.io/software/repository/github/pmvreeswijk/ZOGY", "api_url": "https://rseng.github.io/software/api/repos/github/pmvreeswijk/ZOGY"}, {"uid": "github/aneeshnaik/lintsampler", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/lintsampler", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/lintsampler"}, {"uid": "github/aneeshnaik/spam", "html_url": "https://rseng.github.io/software/repository/github/aneeshnaik/spam", "api_url": "https://rseng.github.io/software/api/repos/github/aneeshnaik/spam"}, {"uid": "github/GalagaBits/JWST-FGS-Spelunker", "html_url": "https://rseng.github.io/software/repository/github/GalagaBits/JWST-FGS-Spelunker", "api_url": "https://rseng.github.io/software/api/repos/github/GalagaBits/JWST-FGS-Spelunker"}, {"uid": "github/ekiefl/pooltool", "html_url": "https://rseng.github.io/software/repository/github/ekiefl/pooltool", "api_url": "https://rseng.github.io/software/api/repos/github/ekiefl/pooltool"}, {"uid": "github/zhouzilu/DENDRO", "html_url": "https://rseng.github.io/software/repository/github/zhouzilu/DENDRO", "api_url": "https://rseng.github.io/software/api/repos/github/zhouzilu/DENDRO"}, {"uid": "github/dynamicslab/pysindy", "html_url": "https://rseng.github.io/software/repository/github/dynamicslab/pysindy", "api_url": "https://rseng.github.io/software/api/repos/github/dynamicslab/pysindy"}, {"uid": "github/EHTJulia/ScatteringOptics.jl", "html_url": "https://rseng.github.io/software/repository/github/EHTJulia/ScatteringOptics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EHTJulia/ScatteringOptics.jl"}, {"uid": "github/dlinssen/sunbather", "html_url": "https://rseng.github.io/software/repository/github/dlinssen/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/dlinssen/sunbather"}, {"uid": "github/mjoppich/bioGUItools", "html_url": "https://rseng.github.io/software/repository/github/mjoppich/bioGUItools", "api_url": "https://rseng.github.io/software/api/repos/github/mjoppich/bioGUItools"}, {"uid": "github/nrao/UniPOPS", "html_url": "https://rseng.github.io/software/repository/github/nrao/UniPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/nrao/UniPOPS"}, {"uid": "github/astroweaver/the_farmer", "html_url": "https://rseng.github.io/software/repository/github/astroweaver/the_farmer", "api_url": "https://rseng.github.io/software/api/repos/github/astroweaver/the_farmer"}, {"uid": "github/Bahler-Lab/pyphe", "html_url": "https://rseng.github.io/software/repository/github/Bahler-Lab/pyphe", "api_url": "https://rseng.github.io/software/api/repos/github/Bahler-Lab/pyphe"}, {"uid": "github/IMMM-SFA/tell", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/tell", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/tell"}, {"uid": "github/IMMM-SFA/mosartwmpy", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/mosartwmpy", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/mosartwmpy"}, {"uid": "github/IMMM-SFA/gamut", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/gamut", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/gamut"}, {"uid": "github/IMMM-SFA/naturf", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/naturf", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/naturf"}, {"uid": "github/IMMM-SFA/statemodify", "html_url": "https://rseng.github.io/software/repository/github/IMMM-SFA/statemodify", "api_url": "https://rseng.github.io/software/api/repos/github/IMMM-SFA/statemodify"}, {"uid": "github/TomKellyGenetics/graphsim", "html_url": "https://rseng.github.io/software/repository/github/TomKellyGenetics/graphsim", "api_url": "https://rseng.github.io/software/api/repos/github/TomKellyGenetics/graphsim"}, {"uid": "github/DrafProject/elmada", "html_url": "https://rseng.github.io/software/repository/github/DrafProject/elmada", "api_url": "https://rseng.github.io/software/api/repos/github/DrafProject/elmada"}, {"uid": "github/vibbits/phyd3", "html_url": "https://rseng.github.io/software/repository/github/vibbits/phyd3", "api_url": "https://rseng.github.io/software/api/repos/github/vibbits/phyd3"}, {"uid": "github/michalychforever/CLASS-PT", "html_url": "https://rseng.github.io/software/repository/github/michalychforever/CLASS-PT", "api_url": "https://rseng.github.io/software/api/repos/github/michalychforever/CLASS-PT"}, {"uid": "github/spectralcode/OCTproZ", "html_url": "https://rseng.github.io/software/repository/github/spectralcode/OCTproZ", "api_url": "https://rseng.github.io/software/api/repos/github/spectralcode/OCTproZ"}, {"uid": "github/dstndstn/astrometry.net", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/astrometry.net", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/astrometry.net"}, {"uid": "github/dstndstn/tractor", "html_url": "https://rseng.github.io/software/repository/github/dstndstn/tractor", "api_url": "https://rseng.github.io/software/api/repos/github/dstndstn/tractor"}, {"uid": "github/AstroAccelerateOrg/astro-accelerate", "html_url": "https://rseng.github.io/software/repository/github/AstroAccelerateOrg/astro-accelerate", "api_url": "https://rseng.github.io/software/api/repos/github/AstroAccelerateOrg/astro-accelerate"}, {"uid": "github/difuture-lmu/dsBinVal", "html_url": "https://rseng.github.io/software/repository/github/difuture-lmu/dsBinVal", "api_url": "https://rseng.github.io/software/api/repos/github/difuture-lmu/dsBinVal"}, {"uid": "github/manodeep/Corrfunc", "html_url": "https://rseng.github.io/software/repository/github/manodeep/Corrfunc", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/Corrfunc"}, {"uid": "github/manodeep/TesseRACt", "html_url": "https://rseng.github.io/software/repository/github/manodeep/TesseRACt", "api_url": "https://rseng.github.io/software/api/repos/github/manodeep/TesseRACt"}, {"uid": "github/cb-ge/ephor_wp4_agnostic_models", "html_url": "https://rseng.github.io/software/repository/github/cb-ge/ephor_wp4_agnostic_models", "api_url": "https://rseng.github.io/software/api/repos/github/cb-ge/ephor_wp4_agnostic_models"}, {"uid": "github/KIT-MBS/pyREX", "html_url": "https://rseng.github.io/software/repository/github/KIT-MBS/pyREX", "api_url": "https://rseng.github.io/software/api/repos/github/KIT-MBS/pyREX"}, {"uid": "github/dnarayanan/powderday", "html_url": "https://rseng.github.io/software/repository/github/dnarayanan/powderday", "api_url": "https://rseng.github.io/software/api/repos/github/dnarayanan/powderday"}, {"uid": "github/seclark/RHT", "html_url": "https://rseng.github.io/software/repository/github/seclark/RHT", "api_url": "https://rseng.github.io/software/api/repos/github/seclark/RHT"}, {"uid": "github/FarnazFouladi/HashSeq_Manuscript", "html_url": "https://rseng.github.io/software/repository/github/FarnazFouladi/HashSeq_Manuscript", "api_url": "https://rseng.github.io/software/api/repos/github/FarnazFouladi/HashSeq_Manuscript"}, {"uid": "github/Samreay/Barry", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Barry", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Barry"}, {"uid": "github/Samreay/ChainConsumer", "html_url": "https://rseng.github.io/software/repository/github/Samreay/ChainConsumer", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/ChainConsumer"}, {"uid": "github/Samreay/Marz", "html_url": "https://rseng.github.io/software/repository/github/Samreay/Marz", "api_url": "https://rseng.github.io/software/api/repos/github/Samreay/Marz"}, {"uid": "github/genner-lab/meta-fish-lib", "html_url": "https://rseng.github.io/software/repository/github/genner-lab/meta-fish-lib", "api_url": "https://rseng.github.io/software/api/repos/github/genner-lab/meta-fish-lib"}, {"uid": "github/ExoJulia/ExoplanetsSysSim.jl", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/ExoplanetsSysSim.jl"}, {"uid": "github/ExoJulia/SysSimExClusters", "html_url": "https://rseng.github.io/software/repository/github/ExoJulia/SysSimExClusters", "api_url": "https://rseng.github.io/software/api/repos/github/ExoJulia/SysSimExClusters"}, {"uid": "github/Rhyd-Lewis/GCol", "html_url": "https://rseng.github.io/software/repository/github/Rhyd-Lewis/GCol", "api_url": "https://rseng.github.io/software/api/repos/github/Rhyd-Lewis/GCol"}, {"uid": "github/barbarabodinier/fake", "html_url": "https://rseng.github.io/software/repository/github/barbarabodinier/fake", "api_url": "https://rseng.github.io/software/api/repos/github/barbarabodinier/fake"}, {"uid": "github/vipinagrawal25/MeMC", "html_url": "https://rseng.github.io/software/repository/github/vipinagrawal25/MeMC", "api_url": "https://rseng.github.io/software/api/repos/github/vipinagrawal25/MeMC"}, {"uid": "github/ifilot/edp", "html_url": "https://rseng.github.io/software/repository/github/ifilot/edp", "api_url": "https://rseng.github.io/software/api/repos/github/ifilot/edp"}, {"uid": "github/ChileanVirtualObservatory/indexing_utfsm", "html_url": "https://rseng.github.io/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", "api_url": "https://rseng.github.io/software/api/repos/github/ChileanVirtualObservatory/indexing_utfsm"}, {"uid": "github/JannisHoch/copro", "html_url": "https://rseng.github.io/software/repository/github/JannisHoch/copro", "api_url": "https://rseng.github.io/software/api/repos/github/JannisHoch/copro"}, {"uid": "github/VIB-PSB/MINI-EX", "html_url": "https://rseng.github.io/software/repository/github/VIB-PSB/MINI-EX", "api_url": "https://rseng.github.io/software/api/repos/github/VIB-PSB/MINI-EX"}, {"uid": "github/omuse-geoscience/omuse", "html_url": "https://rseng.github.io/software/repository/github/omuse-geoscience/omuse", "api_url": "https://rseng.github.io/software/api/repos/github/omuse-geoscience/omuse"}, {"uid": "github/wathela/PyMerger", "html_url": "https://rseng.github.io/software/repository/github/wathela/PyMerger", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/PyMerger"}, {"uid": "github/wathela/FIRST-CLASSIFIER", "html_url": "https://rseng.github.io/software/repository/github/wathela/FIRST-CLASSIFIER", "api_url": "https://rseng.github.io/software/api/repos/github/wathela/FIRST-CLASSIFIER"}, {"uid": "github/fbartolic/volcano", "html_url": "https://rseng.github.io/software/repository/github/fbartolic/volcano", "api_url": "https://rseng.github.io/software/api/repos/github/fbartolic/volcano"}, {"uid": "github/danielacarrasco/GLACiAR", "html_url": "https://rseng.github.io/software/repository/github/danielacarrasco/GLACiAR", "api_url": "https://rseng.github.io/software/api/repos/github/danielacarrasco/GLACiAR"}, {"uid": "github/gpertea/cdbfasta", "html_url": "https://rseng.github.io/software/repository/github/gpertea/cdbfasta", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/cdbfasta"}, {"uid": "github/gpertea/gclib", "html_url": "https://rseng.github.io/software/repository/github/gpertea/gclib", "api_url": "https://rseng.github.io/software/api/repos/github/gpertea/gclib"}, {"uid": "github/kolikem/loma", "html_url": "https://rseng.github.io/software/repository/github/kolikem/loma", "api_url": "https://rseng.github.io/software/api/repos/github/kolikem/loma"}, {"uid": "github/SWAT-Sheffield/SAC", "html_url": "https://rseng.github.io/software/repository/github/SWAT-Sheffield/SAC", "api_url": "https://rseng.github.io/software/api/repos/github/SWAT-Sheffield/SAC"}, {"uid": "github/dipol-uf/DIPOL-UF", "html_url": "https://rseng.github.io/software/repository/github/dipol-uf/DIPOL-UF", "api_url": "https://rseng.github.io/software/api/repos/github/dipol-uf/DIPOL-UF"}, {"uid": "github/avigan/SPHERE", "html_url": "https://rseng.github.io/software/repository/github/avigan/SPHERE", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/SPHERE"}, {"uid": "github/avigan/pyZELDA", "html_url": "https://rseng.github.io/software/repository/github/avigan/pyZELDA", "api_url": "https://rseng.github.io/software/api/repos/github/avigan/pyZELDA"}, {"uid": "github/al-mcintyre/mCaller", "html_url": "https://rseng.github.io/software/repository/github/al-mcintyre/mCaller", "api_url": "https://rseng.github.io/software/api/repos/github/al-mcintyre/mCaller"}, {"uid": "github/CHRF-Genomics/Paratype", "html_url": "https://rseng.github.io/software/repository/github/CHRF-Genomics/Paratype", "api_url": "https://rseng.github.io/software/api/repos/github/CHRF-Genomics/Paratype"}, {"uid": "github/OrchardLANL/DPFEHM.jl", "html_url": "https://rseng.github.io/software/repository/github/OrchardLANL/DPFEHM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/OrchardLANL/DPFEHM.jl"}, {"uid": "github/JoWestermann/smolyax", "html_url": "https://rseng.github.io/software/repository/github/JoWestermann/smolyax", "api_url": "https://rseng.github.io/software/api/repos/github/JoWestermann/smolyax"}, {"uid": "github/C0PEP0D/otto", "html_url": "https://rseng.github.io/software/repository/github/C0PEP0D/otto", "api_url": "https://rseng.github.io/software/api/repos/github/C0PEP0D/otto"}, {"uid": "github/iain-mcdonald/PySSED", "html_url": "https://rseng.github.io/software/repository/github/iain-mcdonald/PySSED", "api_url": "https://rseng.github.io/software/api/repos/github/iain-mcdonald/PySSED"}, {"uid": "github/DistrictDataLabs/yellowbrick", "html_url": "https://rseng.github.io/software/repository/github/DistrictDataLabs/yellowbrick", "api_url": "https://rseng.github.io/software/api/repos/github/DistrictDataLabs/yellowbrick"}, {"uid": "github/egstrom/cluster-in-a-box", "html_url": "https://rseng.github.io/software/repository/github/egstrom/cluster-in-a-box", "api_url": "https://rseng.github.io/software/api/repos/github/egstrom/cluster-in-a-box"}, {"uid": "github/IonRepo/IonDiff", "html_url": "https://rseng.github.io/software/repository/github/IonRepo/IonDiff", "api_url": "https://rseng.github.io/software/api/repos/github/IonRepo/IonDiff"}, {"uid": "github/Kamuish/archi", "html_url": "https://rseng.github.io/software/repository/github/Kamuish/archi", "api_url": "https://rseng.github.io/software/api/repos/github/Kamuish/archi"}, {"uid": "github/jspsych/jspsych", "html_url": "https://rseng.github.io/software/repository/github/jspsych/jspsych", "api_url": "https://rseng.github.io/software/api/repos/github/jspsych/jspsych"}, {"uid": "github/fairtracks/omnipy_examples", "html_url": "https://rseng.github.io/software/repository/github/fairtracks/omnipy_examples", "api_url": "https://rseng.github.io/software/api/repos/github/fairtracks/omnipy_examples"}, {"uid": "github/txopen/histoc", "html_url": "https://rseng.github.io/software/repository/github/txopen/histoc", "api_url": "https://rseng.github.io/software/api/repos/github/txopen/histoc"}, {"uid": "github/ropensci-review-tools/pkgstats", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgstats", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgstats"}, {"uid": "github/ropensci-review-tools/srr", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/srr", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/srr"}, {"uid": "github/ropensci-review-tools/pkgcheck", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/pkgcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/pkgcheck"}, {"uid": "github/ropensci-review-tools/autotest", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/autotest", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/autotest"}, {"uid": "github/ropensci-review-tools/roreviewapi", "html_url": "https://rseng.github.io/software/repository/github/ropensci-review-tools/roreviewapi", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-review-tools/roreviewapi"}, {"uid": "github/bootphon/phonemizer", "html_url": "https://rseng.github.io/software/repository/github/bootphon/phonemizer", "api_url": "https://rseng.github.io/software/api/repos/github/bootphon/phonemizer"}, {"uid": "github/kkma89/dmcalc", "html_url": "https://rseng.github.io/software/repository/github/kkma89/dmcalc", "api_url": "https://rseng.github.io/software/api/repos/github/kkma89/dmcalc"}, {"uid": "github/icb-dcm/pyabc", "html_url": "https://rseng.github.io/software/repository/github/icb-dcm/pyabc", "api_url": "https://rseng.github.io/software/api/repos/github/icb-dcm/pyabc"}, {"uid": "github/pmelchior/shapelens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shapelens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shapelens"}, {"uid": "github/pmelchior/skylens", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skylens", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skylens"}, {"uid": "github/pmelchior/spender", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/spender", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/spender"}, {"uid": "github/pmelchior/des-exp-checker", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/des-exp-checker", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/des-exp-checker"}, {"uid": "github/pmelchior/pyGMMis", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/pyGMMis", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/pyGMMis"}, {"uid": "github/pmelchior/epsnoise", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/epsnoise", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/epsnoise"}, {"uid": "github/pmelchior/shear-stacking", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/shear-stacking", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/shear-stacking"}, {"uid": "github/pmelchior/skymapper", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/skymapper", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/skymapper"}, {"uid": "github/pmelchior/scarlet", "html_url": "https://rseng.github.io/software/repository/github/pmelchior/scarlet", "api_url": "https://rseng.github.io/software/api/repos/github/pmelchior/scarlet"}, {"uid": "github/omboersma/deepglow", "html_url": "https://rseng.github.io/software/repository/github/omboersma/deepglow", "api_url": "https://rseng.github.io/software/api/repos/github/omboersma/deepglow"}, {"uid": "github/mj-will/nessai", "html_url": "https://rseng.github.io/software/repository/github/mj-will/nessai", "api_url": "https://rseng.github.io/software/api/repos/github/mj-will/nessai"}, {"uid": "github/riatelab/osrm", "html_url": "https://rseng.github.io/software/repository/github/riatelab/osrm", "api_url": "https://rseng.github.io/software/api/repos/github/riatelab/osrm"}, {"uid": "github/ledatelescope/bifrost", "html_url": "https://rseng.github.io/software/repository/github/ledatelescope/bifrost", "api_url": "https://rseng.github.io/software/api/repos/github/ledatelescope/bifrost"}, {"uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", "html_url": "https://rseng.github.io/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", "api_url": "https://rseng.github.io/software/api/repos/github/Muhammad-Arif-NUST/BVP_Pred_Unb"}, {"uid": "github/QEF/q-e", "html_url": "https://rseng.github.io/software/repository/github/QEF/q-e", "api_url": "https://rseng.github.io/software/api/repos/github/QEF/q-e"}, {"uid": "github/HIPS/autograd", "html_url": "https://rseng.github.io/software/repository/github/HIPS/autograd", "api_url": "https://rseng.github.io/software/api/repos/github/HIPS/autograd"}, {"uid": "github/lumen-org/lumen", "html_url": "https://rseng.github.io/software/repository/github/lumen-org/lumen", "api_url": "https://rseng.github.io/software/api/repos/github/lumen-org/lumen"}, {"uid": "github/symmy596/SurfinPy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/SurfinPy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/SurfinPy"}, {"uid": "github/symmy596/Polypy", "html_url": "https://rseng.github.io/software/repository/github/symmy596/Polypy", "api_url": "https://rseng.github.io/software/api/repos/github/symmy596/Polypy"}, {"uid": "github/OpenDA-Association/OpenDA", "html_url": "https://rseng.github.io/software/repository/github/OpenDA-Association/OpenDA", "api_url": "https://rseng.github.io/software/api/repos/github/OpenDA-Association/OpenDA"}, {"uid": "github/pynucastro/pynucastro", "html_url": "https://rseng.github.io/software/repository/github/pynucastro/pynucastro", "api_url": "https://rseng.github.io/software/api/repos/github/pynucastro/pynucastro"}, {"uid": "github/molgenis/vibe-suppl", "html_url": "https://rseng.github.io/software/repository/github/molgenis/vibe-suppl", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/vibe-suppl"}, {"uid": "github/molgenis/graph2vr", "html_url": "https://rseng.github.io/software/repository/github/molgenis/graph2vr", "api_url": "https://rseng.github.io/software/api/repos/github/molgenis/graph2vr"}, {"uid": "github/cdalvaro/machine-learning-master-thesis", "html_url": "https://rseng.github.io/software/repository/github/cdalvaro/machine-learning-master-thesis", "api_url": "https://rseng.github.io/software/api/repos/github/cdalvaro/machine-learning-master-thesis"}, {"uid": "github/carpenterphysics/DarkFlux", "html_url": "https://rseng.github.io/software/repository/github/carpenterphysics/DarkFlux", "api_url": "https://rseng.github.io/software/api/repos/github/carpenterphysics/DarkFlux"}, {"uid": "github/arpan-52/Finalflash", "html_url": "https://rseng.github.io/software/repository/github/arpan-52/Finalflash", "api_url": "https://rseng.github.io/software/api/repos/github/arpan-52/Finalflash"}, {"uid": "github/eldariont/svim", "html_url": "https://rseng.github.io/software/repository/github/eldariont/svim", "api_url": "https://rseng.github.io/software/api/repos/github/eldariont/svim"}, {"uid": "github/yrjia1015/CRISPRCasStack", "html_url": "https://rseng.github.io/software/repository/github/yrjia1015/CRISPRCasStack", "api_url": "https://rseng.github.io/software/api/repos/github/yrjia1015/CRISPRCasStack"}, {"uid": "github/BioSTEAMDevelopmentGroup/thermosteam", "html_url": "https://rseng.github.io/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", "api_url": "https://rseng.github.io/software/api/repos/github/BioSTEAMDevelopmentGroup/thermosteam"}, {"uid": "github/gbrammer/unicorn", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/unicorn", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/unicorn"}, {"uid": "github/gbrammer/grizli", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/grizli", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/grizli"}, {"uid": "github/gbrammer/threedhst", "html_url": "https://rseng.github.io/software/repository/github/gbrammer/threedhst", "api_url": "https://rseng.github.io/software/api/repos/github/gbrammer/threedhst"}, {"uid": "github/CoLRev-Environment/bib-dedupe", "html_url": "https://rseng.github.io/software/repository/github/CoLRev-Environment/bib-dedupe", "api_url": "https://rseng.github.io/software/api/repos/github/CoLRev-Environment/bib-dedupe"}, {"uid": "github/JoelForamitti/agentpy", "html_url": "https://rseng.github.io/software/repository/github/JoelForamitti/agentpy", "api_url": "https://rseng.github.io/software/api/repos/github/JoelForamitti/agentpy"}, {"uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "html_url": "https://rseng.github.io/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", "api_url": "https://rseng.github.io/software/api/repos/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs"}, {"uid": "github/Xomics/ACTIONdemonstrator_workflow", "html_url": "https://rseng.github.io/software/repository/github/Xomics/ACTIONdemonstrator_workflow", "api_url": "https://rseng.github.io/software/api/repos/github/Xomics/ACTIONdemonstrator_workflow"}, {"uid": "github/reneheller/pile-up", "html_url": "https://rseng.github.io/software/repository/github/reneheller/pile-up", "api_url": "https://rseng.github.io/software/api/repos/github/reneheller/pile-up"}, {"uid": "github/vals/umis", "html_url": "https://rseng.github.io/software/repository/github/vals/umis", "api_url": "https://rseng.github.io/software/api/repos/github/vals/umis"}, {"uid": "github/pyFFTW/pyFFTW", "html_url": "https://rseng.github.io/software/repository/github/pyFFTW/pyFFTW", "api_url": "https://rseng.github.io/software/api/repos/github/pyFFTW/pyFFTW"}, {"uid": "github/koenderks/jaspAudit", "html_url": "https://rseng.github.io/software/repository/github/koenderks/jaspAudit", "api_url": "https://rseng.github.io/software/api/repos/github/koenderks/jaspAudit"}, {"uid": "github/ReGIS-org/regis-v2", "html_url": "https://rseng.github.io/software/repository/github/ReGIS-org/regis-v2", "api_url": "https://rseng.github.io/software/api/repos/github/ReGIS-org/regis-v2"}, {"uid": "github/ketch/RK-Opt", "html_url": "https://rseng.github.io/software/repository/github/ketch/RK-Opt", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/RK-Opt"}, {"uid": "github/ketch/nodepy", "html_url": "https://rseng.github.io/software/repository/github/ketch/nodepy", "api_url": "https://rseng.github.io/software/api/repos/github/ketch/nodepy"}, {"uid": "github/rodluger/everest", "html_url": "https://rseng.github.io/software/repository/github/rodluger/everest", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/everest"}, {"uid": "github/rodluger/starry_process", "html_url": "https://rseng.github.io/software/repository/github/rodluger/starry_process", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/starry_process"}, {"uid": "github/rodluger/planetplanet", "html_url": "https://rseng.github.io/software/repository/github/rodluger/planetplanet", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/planetplanet"}, {"uid": "github/rodluger/Limbdark.jl", "html_url": "https://rseng.github.io/software/repository/github/rodluger/Limbdark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rodluger/Limbdark.jl"}, {"uid": "github/zoometh/iconr", "html_url": "https://rseng.github.io/software/repository/github/zoometh/iconr", "api_url": "https://rseng.github.io/software/api/repos/github/zoometh/iconr"}, {"uid": "github/zhangzzk/forklens", "html_url": "https://rseng.github.io/software/repository/github/zhangzzk/forklens", "api_url": "https://rseng.github.io/software/api/repos/github/zhangzzk/forklens"}, {"uid": "github/EnricoCorsaro/DIAMONDS", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/DIAMONDS", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/DIAMONDS"}, {"uid": "github/EnricoCorsaro/FAMED", "html_url": "https://rseng.github.io/software/repository/github/EnricoCorsaro/FAMED", "api_url": "https://rseng.github.io/software/api/repos/github/EnricoCorsaro/FAMED"}, {"uid": "github/paumard/cubefit", "html_url": "https://rseng.github.io/software/repository/github/paumard/cubefit", "api_url": "https://rseng.github.io/software/api/repos/github/paumard/cubefit"}, {"uid": "github/aikubo/LinkingLines", "html_url": "https://rseng.github.io/software/repository/github/aikubo/LinkingLines", "api_url": "https://rseng.github.io/software/api/repos/github/aikubo/LinkingLines"}, {"uid": "github/mikekatz04/BOWIE", "html_url": "https://rseng.github.io/software/repository/github/mikekatz04/BOWIE", "api_url": "https://rseng.github.io/software/api/repos/github/mikekatz04/BOWIE"}, {"uid": "github/regonzar/paravt", "html_url": "https://rseng.github.io/software/repository/github/regonzar/paravt", "api_url": "https://rseng.github.io/software/api/repos/github/regonzar/paravt"}, {"uid": "github/GalSim-developers/GalSim", "html_url": "https://rseng.github.io/software/repository/github/GalSim-developers/GalSim", "api_url": "https://rseng.github.io/software/api/repos/github/GalSim-developers/GalSim"}, {"uid": "github/aimalz/qp", "html_url": "https://rseng.github.io/software/repository/github/aimalz/qp", "api_url": "https://rseng.github.io/software/api/repos/github/aimalz/qp"}, {"uid": "github/baker-laboratory/RoseTTAFold-All-Atom", "html_url": "https://rseng.github.io/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", "api_url": "https://rseng.github.io/software/api/repos/github/baker-laboratory/RoseTTAFold-All-Atom"}, {"uid": "github/hpc-maths/samurai", "html_url": "https://rseng.github.io/software/repository/github/hpc-maths/samurai", "api_url": "https://rseng.github.io/software/api/repos/github/hpc-maths/samurai"}, {"uid": "github/tkarwal/procoli", "html_url": "https://rseng.github.io/software/repository/github/tkarwal/procoli", "api_url": "https://rseng.github.io/software/api/repos/github/tkarwal/procoli"}, {"uid": "github/SCM-NV/qmflows", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows"}, {"uid": "github/SCM-NV/pyZacros", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/pyZacros", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/pyZacros"}, {"uid": "github/SCM-NV/qmflows-namd", "html_url": "https://rseng.github.io/software/repository/github/SCM-NV/qmflows-namd", "api_url": "https://rseng.github.io/software/api/repos/github/SCM-NV/qmflows-namd"}, {"uid": "github/cbalbin-FIU/Epitopedia", "html_url": "https://rseng.github.io/software/repository/github/cbalbin-FIU/Epitopedia", "api_url": "https://rseng.github.io/software/api/repos/github/cbalbin-FIU/Epitopedia"}, {"uid": "github/rdpstaff/TaxonomyTree", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/TaxonomyTree", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/TaxonomyTree"}, {"uid": "github/rdpstaff/classifier", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/classifier", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/classifier"}, {"uid": "github/rdpstaff/AlignmentTools", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/AlignmentTools", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/AlignmentTools"}, {"uid": "github/rdpstaff/ReadSeq", "html_url": "https://rseng.github.io/software/repository/github/rdpstaff/ReadSeq", "api_url": "https://rseng.github.io/software/api/repos/github/rdpstaff/ReadSeq"}, {"uid": "github/esperlman/JetCurry", "html_url": "https://rseng.github.io/software/repository/github/esperlman/JetCurry", "api_url": "https://rseng.github.io/software/api/repos/github/esperlman/JetCurry"}, {"uid": "github/dunnkers/fseval", "html_url": "https://rseng.github.io/software/repository/github/dunnkers/fseval", "api_url": "https://rseng.github.io/software/api/repos/github/dunnkers/fseval"}, {"uid": "github/auctus-team/pycapacity", "html_url": "https://rseng.github.io/software/repository/github/auctus-team/pycapacity", "api_url": "https://rseng.github.io/software/api/repos/github/auctus-team/pycapacity"}, {"uid": "github/damask-multiphysics/DAMASK", "html_url": "https://rseng.github.io/software/repository/github/damask-multiphysics/DAMASK", "api_url": "https://rseng.github.io/software/api/repos/github/damask-multiphysics/DAMASK"}, {"uid": "github/palumbom/grass", "html_url": "https://rseng.github.io/software/repository/github/palumbom/grass", "api_url": "https://rseng.github.io/software/api/repos/github/palumbom/grass"}, {"uid": "github/duducosmos/pycosmicstar", "html_url": "https://rseng.github.io/software/repository/github/duducosmos/pycosmicstar", "api_url": "https://rseng.github.io/software/api/repos/github/duducosmos/pycosmicstar"}, {"uid": "github/CoolWorlds/ExoPriors", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/ExoPriors", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/ExoPriors"}, {"uid": "github/CoolWorlds/exoinformatics", "html_url": "https://rseng.github.io/software/repository/github/CoolWorlds/exoinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/CoolWorlds/exoinformatics"}, {"uid": "github/ndaniel/fusioncatcher", "html_url": "https://rseng.github.io/software/repository/github/ndaniel/fusioncatcher", "api_url": "https://rseng.github.io/software/api/repos/github/ndaniel/fusioncatcher"}, {"uid": "github/TPI-Immunogenetics/igmat", "html_url": "https://rseng.github.io/software/repository/github/TPI-Immunogenetics/igmat", "api_url": "https://rseng.github.io/software/api/repos/github/TPI-Immunogenetics/igmat"}, {"uid": "github/humanfactors/FIPS", "html_url": "https://rseng.github.io/software/repository/github/humanfactors/FIPS", "api_url": "https://rseng.github.io/software/api/repos/github/humanfactors/FIPS"}, {"uid": "github/FlorianThibord/OptimiR", "html_url": "https://rseng.github.io/software/repository/github/FlorianThibord/OptimiR", "api_url": "https://rseng.github.io/software/api/repos/github/FlorianThibord/OptimiR"}, {"uid": "github/ocxtal/minialign", "html_url": "https://rseng.github.io/software/repository/github/ocxtal/minialign", "api_url": "https://rseng.github.io/software/api/repos/github/ocxtal/minialign"}, {"uid": "github/bartongroup/yanosim", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/yanosim", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/yanosim"}, {"uid": "github/bartongroup/RoSA", "html_url": "https://rseng.github.io/software/repository/github/bartongroup/RoSA", "api_url": "https://rseng.github.io/software/api/repos/github/bartongroup/RoSA"}, {"uid": "github/jluastro/PopSyCLE", "html_url": "https://rseng.github.io/software/repository/github/jluastro/PopSyCLE", "api_url": "https://rseng.github.io/software/api/repos/github/jluastro/PopSyCLE"}, {"uid": "github/sybila/biodivine-aeon-py", "html_url": "https://rseng.github.io/software/repository/github/sybila/biodivine-aeon-py", "api_url": "https://rseng.github.io/software/api/repos/github/sybila/biodivine-aeon-py"}, {"uid": "github/redcap-tools/PyCap", "html_url": "https://rseng.github.io/software/repository/github/redcap-tools/PyCap", "api_url": "https://rseng.github.io/software/api/repos/github/redcap-tools/PyCap"}, {"uid": "github/taranu/AllStarFit", "html_url": "https://rseng.github.io/software/repository/github/taranu/AllStarFit", "api_url": "https://rseng.github.io/software/api/repos/github/taranu/AllStarFit"}, {"uid": "github/DamynChipman/EllipticForest", "html_url": "https://rseng.github.io/software/repository/github/DamynChipman/EllipticForest", "api_url": "https://rseng.github.io/software/api/repos/github/DamynChipman/EllipticForest"}, {"uid": "github/dcouvin/CRISPRCasFinder", "html_url": "https://rseng.github.io/software/repository/github/dcouvin/CRISPRCasFinder", "api_url": "https://rseng.github.io/software/api/repos/github/dcouvin/CRISPRCasFinder"}, {"uid": "github/tidymess-code/tidymess", "html_url": "https://rseng.github.io/software/repository/github/tidymess-code/tidymess", "api_url": "https://rseng.github.io/software/api/repos/github/tidymess-code/tidymess"}, {"uid": "github/arq5x/lumpy-sv", "html_url": "https://rseng.github.io/software/repository/github/arq5x/lumpy-sv", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/lumpy-sv"}, {"uid": "github/arq5x/poretools", "html_url": "https://rseng.github.io/software/repository/github/arq5x/poretools", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/poretools"}, {"uid": "github/arq5x/bedtools2", "html_url": "https://rseng.github.io/software/repository/github/arq5x/bedtools2", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/bedtools2"}, {"uid": "github/arq5x/grabix", "html_url": "https://rseng.github.io/software/repository/github/arq5x/grabix", "api_url": "https://rseng.github.io/software/api/repos/github/arq5x/grabix"}, {"uid": "github/gigjozsa/tirific", "html_url": "https://rseng.github.io/software/repository/github/gigjozsa/tirific", "api_url": "https://rseng.github.io/software/api/repos/github/gigjozsa/tirific"}, {"uid": "github/DReichLab/EIG", "html_url": "https://rseng.github.io/software/repository/github/DReichLab/EIG", "api_url": "https://rseng.github.io/software/api/repos/github/DReichLab/EIG"}, {"uid": "github/PathoGenOmics-Lab/get_mnv", "html_url": "https://rseng.github.io/software/repository/github/PathoGenOmics-Lab/get_mnv", "api_url": "https://rseng.github.io/software/api/repos/github/PathoGenOmics-Lab/get_mnv"}, {"uid": "github/IFCA-Advanced-Computing/FAIR_eva", "html_url": "https://rseng.github.io/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", "api_url": "https://rseng.github.io/software/api/repos/github/IFCA-Advanced-Computing/FAIR_eva"}, {"uid": "github/pydemull/activAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/pydemull/activAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/pydemull/activAnalyzer"}, {"uid": "github/andr1976/HydDown", "html_url": "https://rseng.github.io/software/repository/github/andr1976/HydDown", "api_url": "https://rseng.github.io/software/api/repos/github/andr1976/HydDown"}, {"uid": "github/bioexcel/biobb_wf_flexdyn", "html_url": "https://rseng.github.io/software/repository/github/bioexcel/biobb_wf_flexdyn", "api_url": "https://rseng.github.io/software/api/repos/github/bioexcel/biobb_wf_flexdyn"}, {"uid": "github/li-yangyang/lotus", "html_url": "https://rseng.github.io/software/repository/github/li-yangyang/lotus", "api_url": "https://rseng.github.io/software/api/repos/github/li-yangyang/lotus"}, {"uid": "github/NIFTy-PPL/JAXbind", "html_url": "https://rseng.github.io/software/repository/github/NIFTy-PPL/JAXbind", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTy-PPL/JAXbind"}, {"uid": "github/martinlackner/abcvoting", "html_url": "https://rseng.github.io/software/repository/github/martinlackner/abcvoting", "api_url": "https://rseng.github.io/software/api/repos/github/martinlackner/abcvoting"}, {"uid": "github/lime-rt/lime", "html_url": "https://rseng.github.io/software/repository/github/lime-rt/lime", "api_url": "https://rseng.github.io/software/api/repos/github/lime-rt/lime"}, {"uid": "github/imperialchem/mrd-demo", "html_url": "https://rseng.github.io/software/repository/github/imperialchem/mrd-demo", "api_url": "https://rseng.github.io/software/api/repos/github/imperialchem/mrd-demo"}, {"uid": "github/syasini/AstroPaint", "html_url": "https://rseng.github.io/software/repository/github/syasini/AstroPaint", "api_url": "https://rseng.github.io/software/api/repos/github/syasini/AstroPaint"}, {"uid": "github/benyhh/ml-telescope-pointing-correction", "html_url": "https://rseng.github.io/software/repository/github/benyhh/ml-telescope-pointing-correction", "api_url": "https://rseng.github.io/software/api/repos/github/benyhh/ml-telescope-pointing-correction"}, {"uid": "github/kylejgillett/sounderpy", "html_url": "https://rseng.github.io/software/repository/github/kylejgillett/sounderpy", "api_url": "https://rseng.github.io/software/api/repos/github/kylejgillett/sounderpy"}, {"uid": "github/anchal-009/SAVED21cm", "html_url": "https://rseng.github.io/software/repository/github/anchal-009/SAVED21cm", "api_url": "https://rseng.github.io/software/api/repos/github/anchal-009/SAVED21cm"}, {"uid": "github/sxs-collaboration/gwsurrogate", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/gwsurrogate", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/gwsurrogate"}, {"uid": "github/sxs-collaboration/spectre", "html_url": "https://rseng.github.io/software/repository/github/sxs-collaboration/spectre", "api_url": "https://rseng.github.io/software/api/repos/github/sxs-collaboration/spectre"}, {"uid": "github/karlropkins/AQEval", "html_url": "https://rseng.github.io/software/repository/github/karlropkins/AQEval", "api_url": "https://rseng.github.io/software/api/repos/github/karlropkins/AQEval"}, {"uid": "github/robbievanleeuwen/section-properties", "html_url": "https://rseng.github.io/software/repository/github/robbievanleeuwen/section-properties", "api_url": "https://rseng.github.io/software/api/repos/github/robbievanleeuwen/section-properties"}, {"uid": "github/jhayer/baargin", "html_url": "https://rseng.github.io/software/repository/github/jhayer/baargin", "api_url": "https://rseng.github.io/software/api/repos/github/jhayer/baargin"}, {"uid": "github/simple-crypto/SCALib", "html_url": "https://rseng.github.io/software/repository/github/simple-crypto/SCALib", "api_url": "https://rseng.github.io/software/api/repos/github/simple-crypto/SCALib"}, {"uid": "github/dicompyler/dicompyler-core", "html_url": "https://rseng.github.io/software/repository/github/dicompyler/dicompyler-core", "api_url": "https://rseng.github.io/software/api/repos/github/dicompyler/dicompyler-core"}, {"uid": "github/pierrexyz/pybird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/pybird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/pybird"}, {"uid": "github/pierrexyz/cbird", "html_url": "https://rseng.github.io/software/repository/github/pierrexyz/cbird", "api_url": "https://rseng.github.io/software/api/repos/github/pierrexyz/cbird"}, {"uid": "github/SciML/DataInterpolations.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/DataInterpolations.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/DataInterpolations.jl"}, {"uid": "github/SciML/GlobalSensitivity.jl", "html_url": "https://rseng.github.io/software/repository/github/SciML/GlobalSensitivity.jl", "api_url": "https://rseng.github.io/software/api/repos/github/SciML/GlobalSensitivity.jl"}, {"uid": "github/compomics/COSS", "html_url": "https://rseng.github.io/software/repository/github/compomics/COSS", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/COSS"}, {"uid": "github/compomics/xilmass", "html_url": "https://rseng.github.io/software/repository/github/compomics/xilmass", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/xilmass"}, {"uid": "github/compomics/DeepLC", "html_url": "https://rseng.github.io/software/repository/github/compomics/DeepLC", "api_url": "https://rseng.github.io/software/api/repos/github/compomics/DeepLC"}, {"uid": "github/samtools/bcftools", "html_url": "https://rseng.github.io/software/repository/github/samtools/bcftools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/bcftools"}, {"uid": "github/samtools/samtools", "html_url": "https://rseng.github.io/software/repository/github/samtools/samtools", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/samtools"}, {"uid": "github/samtools/htsjdk", "html_url": "https://rseng.github.io/software/repository/github/samtools/htsjdk", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htsjdk"}, {"uid": "github/samtools/htslib", "html_url": "https://rseng.github.io/software/repository/github/samtools/htslib", "api_url": "https://rseng.github.io/software/api/repos/github/samtools/htslib"}, {"uid": "github/cdw9bf/CompactGroup", "html_url": "https://rseng.github.io/software/repository/github/cdw9bf/CompactGroup", "api_url": "https://rseng.github.io/software/api/repos/github/cdw9bf/CompactGroup"}, {"uid": "github/intelligent-soft-robots/o80", "html_url": "https://rseng.github.io/software/repository/github/intelligent-soft-robots/o80", "api_url": "https://rseng.github.io/software/api/repos/github/intelligent-soft-robots/o80"}, {"uid": "github/thelfer/mfem-mgis", "html_url": "https://rseng.github.io/software/repository/github/thelfer/mfem-mgis", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/mfem-mgis"}, {"uid": "github/thelfer/MFrontGallery", "html_url": "https://rseng.github.io/software/repository/github/thelfer/MFrontGallery", "api_url": "https://rseng.github.io/software/api/repos/github/thelfer/MFrontGallery"}, {"uid": "github/annacrnn/rebound_fragmentation", "html_url": "https://rseng.github.io/software/repository/github/annacrnn/rebound_fragmentation", "api_url": "https://rseng.github.io/software/api/repos/github/annacrnn/rebound_fragmentation"}, {"uid": "github/kemasuda/jnkepler", "html_url": "https://rseng.github.io/software/repository/github/kemasuda/jnkepler", "api_url": "https://rseng.github.io/software/api/repos/github/kemasuda/jnkepler"}, {"uid": "github/szpiech/selscan", "html_url": "https://rseng.github.io/software/repository/github/szpiech/selscan", "api_url": "https://rseng.github.io/software/api/repos/github/szpiech/selscan"}, {"uid": "github/jwohlwend/boltz", "html_url": "https://rseng.github.io/software/repository/github/jwohlwend/boltz", "api_url": "https://rseng.github.io/software/api/repos/github/jwohlwend/boltz"}, {"uid": "github/mpievolbio-scicomp/cancer_sim", "html_url": "https://rseng.github.io/software/repository/github/mpievolbio-scicomp/cancer_sim", "api_url": "https://rseng.github.io/software/api/repos/github/mpievolbio-scicomp/cancer_sim"}, {"uid": "github/MariaTsantaki/FASMA-synthesis", "html_url": "https://rseng.github.io/software/repository/github/MariaTsantaki/FASMA-synthesis", "api_url": "https://rseng.github.io/software/api/repos/github/MariaTsantaki/FASMA-synthesis"}, {"uid": "github/dtanoglidis/DeepShadows", "html_url": "https://rseng.github.io/software/repository/github/dtanoglidis/DeepShadows", "api_url": "https://rseng.github.io/software/api/repos/github/dtanoglidis/DeepShadows"}, {"uid": "github/NicOudart/PyBWE", "html_url": "https://rseng.github.io/software/repository/github/NicOudart/PyBWE", "api_url": "https://rseng.github.io/software/api/repos/github/NicOudart/PyBWE"}, {"uid": "github/telegraphic/fits2hdf", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/fits2hdf", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/fits2hdf"}, {"uid": "github/telegraphic/pygsm", "html_url": "https://rseng.github.io/software/repository/github/telegraphic/pygsm", "api_url": "https://rseng.github.io/software/api/repos/github/telegraphic/pygsm"}, {"uid": "github/RasmussenLab/vamb", "html_url": "https://rseng.github.io/software/repository/github/RasmussenLab/vamb", "api_url": "https://rseng.github.io/software/api/repos/github/RasmussenLab/vamb"}, {"uid": "github/ggobi/ggobi", "html_url": "https://rseng.github.io/software/repository/github/ggobi/ggobi", "api_url": "https://rseng.github.io/software/api/repos/github/ggobi/ggobi"}, {"uid": "github/sundarjhu/2-DUST", "html_url": "https://rseng.github.io/software/repository/github/sundarjhu/2-DUST", "api_url": "https://rseng.github.io/software/api/repos/github/sundarjhu/2-DUST"}, {"uid": "github/pierrepo/autoclassweb", "html_url": "https://rseng.github.io/software/repository/github/pierrepo/autoclassweb", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepo/autoclassweb"}, {"uid": "github/glenco/lensed", "html_url": "https://rseng.github.io/software/repository/github/glenco/lensed", "api_url": "https://rseng.github.io/software/api/repos/github/glenco/lensed"}, {"uid": "github/SESMG/SESMG", "html_url": "https://rseng.github.io/software/repository/github/SESMG/SESMG", "api_url": "https://rseng.github.io/software/api/repos/github/SESMG/SESMG"}, {"uid": "github/ajohnson-uoregon/llvm-project", "html_url": "https://rseng.github.io/software/repository/github/ajohnson-uoregon/llvm-project", "api_url": "https://rseng.github.io/software/api/repos/github/ajohnson-uoregon/llvm-project"}, {"uid": "github/JuliaPlots/Makie.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaPlots/Makie.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaPlots/Makie.jl"}, {"uid": "github/RETURN-project/BenchmarkRecovery", "html_url": "https://rseng.github.io/software/repository/github/RETURN-project/BenchmarkRecovery", "api_url": "https://rseng.github.io/software/api/repos/github/RETURN-project/BenchmarkRecovery"}, {"uid": "github/RemieJanssen/phylox", "html_url": "https://rseng.github.io/software/repository/github/RemieJanssen/phylox", "api_url": "https://rseng.github.io/software/api/repos/github/RemieJanssen/phylox"}, {"uid": "github/samconnolly/DELightcurveSimulation", "html_url": "https://rseng.github.io/software/repository/github/samconnolly/DELightcurveSimulation", "api_url": "https://rseng.github.io/software/api/repos/github/samconnolly/DELightcurveSimulation"}, {"uid": "github/erling6232/imagedata", "html_url": "https://rseng.github.io/software/repository/github/erling6232/imagedata", "api_url": "https://rseng.github.io/software/api/repos/github/erling6232/imagedata"}, {"uid": "github/twopin/CAMP", "html_url": "https://rseng.github.io/software/repository/github/twopin/CAMP", "api_url": "https://rseng.github.io/software/api/repos/github/twopin/CAMP"}, {"uid": "github/PennyLaneAI/catalyst", "html_url": "https://rseng.github.io/software/repository/github/PennyLaneAI/catalyst", "api_url": "https://rseng.github.io/software/api/repos/github/PennyLaneAI/catalyst"}, {"uid": "github/slimgroup/InvertibleNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/slimgroup/InvertibleNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/slimgroup/InvertibleNetworks.jl"}, {"uid": "github/kernsuite-debian/parseltongue", "html_url": "https://rseng.github.io/software/repository/github/kernsuite-debian/parseltongue", "api_url": "https://rseng.github.io/software/api/repos/github/kernsuite-debian/parseltongue"}, {"uid": "github/akleroy/phangs_imaging_scripts", "html_url": "https://rseng.github.io/software/repository/github/akleroy/phangs_imaging_scripts", "api_url": "https://rseng.github.io/software/api/repos/github/akleroy/phangs_imaging_scripts"}, {"uid": "github/trivnguyen/florah", "html_url": "https://rseng.github.io/software/repository/github/trivnguyen/florah", "api_url": "https://rseng.github.io/software/api/repos/github/trivnguyen/florah"}, {"uid": "github/exafmm/exafmm-t", "html_url": "https://rseng.github.io/software/repository/github/exafmm/exafmm-t", "api_url": "https://rseng.github.io/software/api/repos/github/exafmm/exafmm-t"}, {"uid": "github/murphycj/AGFusion", "html_url": "https://rseng.github.io/software/repository/github/murphycj/AGFusion", "api_url": "https://rseng.github.io/software/api/repos/github/murphycj/AGFusion"}, {"uid": "github/rramadeu/AGHmatrix", "html_url": "https://rseng.github.io/software/repository/github/rramadeu/AGHmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/rramadeu/AGHmatrix"}, {"uid": "github/tsfloss/DensityFieldTools", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/DensityFieldTools", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/DensityFieldTools"}, {"uid": "github/tsfloss/URecon", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/URecon", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/URecon"}, {"uid": "github/tsfloss/BFast", "html_url": "https://rseng.github.io/software/repository/github/tsfloss/BFast", "api_url": "https://rseng.github.io/software/api/repos/github/tsfloss/BFast"}, {"uid": "github/radis/radis", "html_url": "https://rseng.github.io/software/repository/github/radis/radis", "api_url": "https://rseng.github.io/software/api/repos/github/radis/radis"}, {"uid": "github/ncas-cms/pyfive", "html_url": "https://rseng.github.io/software/repository/github/ncas-cms/pyfive", "api_url": "https://rseng.github.io/software/api/repos/github/ncas-cms/pyfive"}, {"uid": "github/ChristopherWilks/megadepth", "html_url": "https://rseng.github.io/software/repository/github/ChristopherWilks/megadepth", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopherWilks/megadepth"}, {"uid": "github/anwarbio/bioassays", "html_url": "https://rseng.github.io/software/repository/github/anwarbio/bioassays", "api_url": "https://rseng.github.io/software/api/repos/github/anwarbio/bioassays"}, {"uid": "github/heuermh/dishevelled-bio", "html_url": "https://rseng.github.io/software/repository/github/heuermh/dishevelled-bio", "api_url": "https://rseng.github.io/software/api/repos/github/heuermh/dishevelled-bio"}, {"uid": "github/jordanflitter/21cmFirstCLASS", "html_url": "https://rseng.github.io/software/repository/github/jordanflitter/21cmFirstCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/jordanflitter/21cmFirstCLASS"}, {"uid": "github/JuBiotech/peak-performance", "html_url": "https://rseng.github.io/software/repository/github/JuBiotech/peak-performance", "api_url": "https://rseng.github.io/software/api/repos/github/JuBiotech/peak-performance"}, {"uid": "github/hyattpd/Prodigal", "html_url": "https://rseng.github.io/software/repository/github/hyattpd/Prodigal", "api_url": "https://rseng.github.io/software/api/repos/github/hyattpd/Prodigal"}, {"uid": "github/kkrismer/scansite4", "html_url": "https://rseng.github.io/software/repository/github/kkrismer/scansite4", "api_url": "https://rseng.github.io/software/api/repos/github/kkrismer/scansite4"}, {"uid": "github/axgoujon/convex_ridge_regularizers", "html_url": "https://rseng.github.io/software/repository/github/axgoujon/convex_ridge_regularizers", "api_url": "https://rseng.github.io/software/api/repos/github/axgoujon/convex_ridge_regularizers"}, {"uid": "github/henrycousins/gspa", "html_url": "https://rseng.github.io/software/repository/github/henrycousins/gspa", "api_url": "https://rseng.github.io/software/api/repos/github/henrycousins/gspa"}, {"uid": "github/adigenova/wengan", "html_url": "https://rseng.github.io/software/repository/github/adigenova/wengan", "api_url": "https://rseng.github.io/software/api/repos/github/adigenova/wengan"}, {"uid": "github/pcubillos/repack", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/repack", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/repack"}, {"uid": "github/pcubillos/rate", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/rate", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/rate"}, {"uid": "github/pcubillos/pyratbay", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/pyratbay", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/pyratbay"}, {"uid": "github/pcubillos/gen_tso", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/gen_tso", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/gen_tso"}, {"uid": "github/pcubillos/mc3", "html_url": "https://rseng.github.io/software/repository/github/pcubillos/mc3", "api_url": "https://rseng.github.io/software/api/repos/github/pcubillos/mc3"}, {"uid": "github/xenon-middleware/xenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/xenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/xenon"}, {"uid": "github/xenon-middleware/pyxenon", "html_url": "https://rseng.github.io/software/repository/github/xenon-middleware/pyxenon", "api_url": "https://rseng.github.io/software/api/repos/github/xenon-middleware/pyxenon"}, {"uid": "github/mlr-org/mcboost", "html_url": "https://rseng.github.io/software/repository/github/mlr-org/mcboost", "api_url": "https://rseng.github.io/software/api/repos/github/mlr-org/mcboost"}, {"uid": "github/rudolffu/pyfosc", "html_url": "https://rseng.github.io/software/repository/github/rudolffu/pyfosc", "api_url": "https://rseng.github.io/software/api/repos/github/rudolffu/pyfosc"}, {"uid": "github/LSSTDESC/Spectractor", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/Spectractor", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/Spectractor"}, {"uid": "github/LSSTDESC/chroma", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/chroma", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/chroma"}, {"uid": "github/LSSTDESC/snmachine", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/snmachine", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/snmachine"}, {"uid": "github/LSSTDESC/BlendingToolKit", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/BlendingToolKit", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/BlendingToolKit"}, {"uid": "github/LSSTDESC/sacc", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/sacc", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/sacc"}, {"uid": "github/LSSTDESC/descqa", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/descqa", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/descqa"}, {"uid": "github/LSSTDESC/CCL", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/CCL", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/CCL"}, {"uid": "github/LSSTDESC/NaMaster", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/NaMaster", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/NaMaster"}, {"uid": "github/LSSTDESC/WeakLensingDeblending", "html_url": "https://rseng.github.io/software/repository/github/LSSTDESC/WeakLensingDeblending", "api_url": "https://rseng.github.io/software/api/repos/github/LSSTDESC/WeakLensingDeblending"}, {"uid": "github/gdefazio/kMetaShot", "html_url": "https://rseng.github.io/software/repository/github/gdefazio/kMetaShot", "api_url": "https://rseng.github.io/software/api/repos/github/gdefazio/kMetaShot"}, {"uid": "github/skypyproject/skypy", "html_url": "https://rseng.github.io/software/repository/github/skypyproject/skypy", "api_url": "https://rseng.github.io/software/api/repos/github/skypyproject/skypy"}, {"uid": "github/david-mathews-1994/deltarice", "html_url": "https://rseng.github.io/software/repository/github/david-mathews-1994/deltarice", "api_url": "https://rseng.github.io/software/api/repos/github/david-mathews-1994/deltarice"}, {"uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "html_url": "https://rseng.github.io/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", "api_url": "https://rseng.github.io/software/api/repos/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum"}, {"uid": "github/cicirello/Chips-n-Salsa", "html_url": "https://rseng.github.io/software/repository/github/cicirello/Chips-n-Salsa", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/Chips-n-Salsa"}, {"uid": "github/cicirello/rho-mu", "html_url": "https://rseng.github.io/software/repository/github/cicirello/rho-mu", "api_url": "https://rseng.github.io/software/api/repos/github/cicirello/rho-mu"}, {"uid": "github/cosimameyer/overviewR", "html_url": "https://rseng.github.io/software/repository/github/cosimameyer/overviewR", "api_url": "https://rseng.github.io/software/api/repos/github/cosimameyer/overviewR"}, {"uid": "github/Deyht/CIANNA", "html_url": "https://rseng.github.io/software/repository/github/Deyht/CIANNA", "api_url": "https://rseng.github.io/software/api/repos/github/Deyht/CIANNA"}, {"uid": "github/ParkerLab/ataqv", "html_url": "https://rseng.github.io/software/repository/github/ParkerLab/ataqv", "api_url": "https://rseng.github.io/software/api/repos/github/ParkerLab/ataqv"}, {"uid": "github/ImproPhoto/pymicmac", "html_url": "https://rseng.github.io/software/repository/github/ImproPhoto/pymicmac", "api_url": "https://rseng.github.io/software/api/repos/github/ImproPhoto/pymicmac"}, {"uid": "github/PEJpOhno/SMiPoly", "html_url": "https://rseng.github.io/software/repository/github/PEJpOhno/SMiPoly", "api_url": "https://rseng.github.io/software/api/repos/github/PEJpOhno/SMiPoly"}, {"uid": "github/athulpg007/AMAT", "html_url": "https://rseng.github.io/software/repository/github/athulpg007/AMAT", "api_url": "https://rseng.github.io/software/api/repos/github/athulpg007/AMAT"}, {"uid": "github/ManuelRausch/StatConfR", "html_url": "https://rseng.github.io/software/repository/github/ManuelRausch/StatConfR", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelRausch/StatConfR"}, {"uid": "github/andyphilips/dynamac", "html_url": "https://rseng.github.io/software/repository/github/andyphilips/dynamac", "api_url": "https://rseng.github.io/software/api/repos/github/andyphilips/dynamac"}, {"uid": "github/Nadi-System/nadi-system", "html_url": "https://rseng.github.io/software/repository/github/Nadi-System/nadi-system", "api_url": "https://rseng.github.io/software/api/repos/github/Nadi-System/nadi-system"}, {"uid": "github/francescoa97outlook/pyExoRaMa", "html_url": "https://rseng.github.io/software/repository/github/francescoa97outlook/pyExoRaMa", "api_url": "https://rseng.github.io/software/api/repos/github/francescoa97outlook/pyExoRaMa"}, {"uid": "github/Pas-Kapli/mptp", "html_url": "https://rseng.github.io/software/repository/github/Pas-Kapli/mptp", "api_url": "https://rseng.github.io/software/api/repos/github/Pas-Kapli/mptp"}, {"uid": "github/candebellavita/vkompth", "html_url": "https://rseng.github.io/software/repository/github/candebellavita/vkompth", "api_url": "https://rseng.github.io/software/api/repos/github/candebellavita/vkompth"}, {"uid": "github/Xia-Yijie/Xponge", "html_url": "https://rseng.github.io/software/repository/github/Xia-Yijie/Xponge", "api_url": "https://rseng.github.io/software/api/repos/github/Xia-Yijie/Xponge"}, {"uid": "github/phineasng/DECODE", "html_url": "https://rseng.github.io/software/repository/github/phineasng/DECODE", "api_url": "https://rseng.github.io/software/api/repos/github/phineasng/DECODE"}, {"uid": "github/TommyJones/tidylda", "html_url": "https://rseng.github.io/software/repository/github/TommyJones/tidylda", "api_url": "https://rseng.github.io/software/api/repos/github/TommyJones/tidylda"}, {"uid": "github/yuliang419/AstroNet-Triage", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Triage", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Triage"}, {"uid": "github/yuliang419/AstroNet-Vetting", "html_url": "https://rseng.github.io/software/repository/github/yuliang419/AstroNet-Vetting", "api_url": "https://rseng.github.io/software/api/repos/github/yuliang419/AstroNet-Vetting"}, {"uid": "github/ginolhac/mapDamage", "html_url": "https://rseng.github.io/software/repository/github/ginolhac/mapDamage", "api_url": "https://rseng.github.io/software/api/repos/github/ginolhac/mapDamage"}, {"uid": "github/lilyminium/psiresp", "html_url": "https://rseng.github.io/software/repository/github/lilyminium/psiresp", "api_url": "https://rseng.github.io/software/api/repos/github/lilyminium/psiresp"}, {"uid": "github/giuspugl/COnet", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/COnet", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/COnet"}, {"uid": "github/giuspugl/picasso", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/picasso"}, {"uid": "github/giuspugl/MCMole3D", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/MCMole3D", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/MCMole3D"}, {"uid": "github/giuspugl/fgcluster", "html_url": "https://rseng.github.io/software/repository/github/giuspugl/fgcluster", "api_url": "https://rseng.github.io/software/api/repos/github/giuspugl/fgcluster"}, {"uid": "github/hongwanliu/DarkHistory", "html_url": "https://rseng.github.io/software/repository/github/hongwanliu/DarkHistory", "api_url": "https://rseng.github.io/software/api/repos/github/hongwanliu/DarkHistory"}, {"uid": "github/aamedinburgh/igmtransmission", "html_url": "https://rseng.github.io/software/repository/github/aamedinburgh/igmtransmission", "api_url": "https://rseng.github.io/software/api/repos/github/aamedinburgh/igmtransmission"}, {"uid": "github/aasensio/molpop-cep", "html_url": "https://rseng.github.io/software/repository/github/aasensio/molpop-cep", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/molpop-cep"}, {"uid": "github/aasensio/torchmfbd", "html_url": "https://rseng.github.io/software/repository/github/aasensio/torchmfbd", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/torchmfbd"}, {"uid": "github/aasensio/sicon", "html_url": "https://rseng.github.io/software/repository/github/aasensio/sicon", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/sicon"}, {"uid": "github/aasensio/hazel", "html_url": "https://rseng.github.io/software/repository/github/aasensio/hazel", "api_url": "https://rseng.github.io/software/api/repos/github/aasensio/hazel"}, {"uid": "github/jdiasn/lidarSuit", "html_url": "https://rseng.github.io/software/repository/github/jdiasn/lidarSuit", "api_url": "https://rseng.github.io/software/api/repos/github/jdiasn/lidarSuit"}, {"uid": "github/alejandrobll/py-sphviewer", "html_url": "https://rseng.github.io/software/repository/github/alejandrobll/py-sphviewer", "api_url": "https://rseng.github.io/software/api/repos/github/alejandrobll/py-sphviewer"}, {"uid": "github/calebclass/Shiny-NanoTube", "html_url": "https://rseng.github.io/software/repository/github/calebclass/Shiny-NanoTube", "api_url": "https://rseng.github.io/software/api/repos/github/calebclass/Shiny-NanoTube"}, {"uid": "github/fumi-github/omicwas", "html_url": "https://rseng.github.io/software/repository/github/fumi-github/omicwas", "api_url": "https://rseng.github.io/software/api/repos/github/fumi-github/omicwas"}, {"uid": "github/Krona/wiki", "html_url": "https://rseng.github.io/software/repository/github/Krona/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/Krona/wiki"}, {"uid": "github/nomad-coe/greenX", "html_url": "https://rseng.github.io/software/repository/github/nomad-coe/greenX", "api_url": "https://rseng.github.io/software/api/repos/github/nomad-coe/greenX"}, {"uid": "github/sfschen/spinosaurus", "html_url": "https://rseng.github.io/software/repository/github/sfschen/spinosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/spinosaurus"}, {"uid": "github/sfschen/velocileptors", "html_url": "https://rseng.github.io/software/repository/github/sfschen/velocileptors", "api_url": "https://rseng.github.io/software/api/repos/github/sfschen/velocileptors"}, {"uid": "github/ConnorDonegan/geostan", "html_url": "https://rseng.github.io/software/repository/github/ConnorDonegan/geostan", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorDonegan/geostan"}, {"uid": "github/IftachSadeh/ANNZ", "html_url": "https://rseng.github.io/software/repository/github/IftachSadeh/ANNZ", "api_url": "https://rseng.github.io/software/api/repos/github/IftachSadeh/ANNZ"}, {"uid": "github/scottgigante/picopore", "html_url": "https://rseng.github.io/software/repository/github/scottgigante/picopore", "api_url": "https://rseng.github.io/software/api/repos/github/scottgigante/picopore"}, {"uid": "github/silkemaes/MACE", "html_url": "https://rseng.github.io/software/repository/github/silkemaes/MACE", "api_url": "https://rseng.github.io/software/api/repos/github/silkemaes/MACE"}, {"uid": "github/Basvanstein/GSAreport", "html_url": "https://rseng.github.io/software/repository/github/Basvanstein/GSAreport", "api_url": "https://rseng.github.io/software/api/repos/github/Basvanstein/GSAreport"}, {"uid": "github/mpokorny/vysmaw", "html_url": "https://rseng.github.io/software/repository/github/mpokorny/vysmaw", "api_url": "https://rseng.github.io/software/api/repos/github/mpokorny/vysmaw"}, {"uid": "github/MiguelEA/nudec_BSM", "html_url": "https://rseng.github.io/software/repository/github/MiguelEA/nudec_BSM", "api_url": "https://rseng.github.io/software/api/repos/github/MiguelEA/nudec_BSM"}, {"uid": "github/pysersic/pysersic", "html_url": "https://rseng.github.io/software/repository/github/pysersic/pysersic", "api_url": "https://rseng.github.io/software/api/repos/github/pysersic/pysersic"}, {"uid": "github/524D/compareMS2", "html_url": "https://rseng.github.io/software/repository/github/524D/compareMS2", "api_url": "https://rseng.github.io/software/api/repos/github/524D/compareMS2"}, {"uid": "github/ronnyerrmann/HiFLEx", "html_url": "https://rseng.github.io/software/repository/github/ronnyerrmann/HiFLEx", "api_url": "https://rseng.github.io/software/api/repos/github/ronnyerrmann/HiFLEx"}, {"uid": "github/stingraysoftware/stingray", "html_url": "https://rseng.github.io/software/repository/github/stingraysoftware/stingray", "api_url": "https://rseng.github.io/software/api/repos/github/stingraysoftware/stingray"}, {"uid": "github/sieunhanbom04/support-exploration-matrix-factorization", "html_url": "https://rseng.github.io/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", "api_url": "https://rseng.github.io/software/api/repos/github/sieunhanbom04/support-exploration-matrix-factorization"}, {"uid": "github/polca/pathways", "html_url": "https://rseng.github.io/software/repository/github/polca/pathways", "api_url": "https://rseng.github.io/software/api/repos/github/polca/pathways"}, {"uid": "github/polca/unfold", "html_url": "https://rseng.github.io/software/repository/github/polca/unfold", "api_url": "https://rseng.github.io/software/api/repos/github/polca/unfold"}, {"uid": "github/liulizhi1996/HPODNets", "html_url": "https://rseng.github.io/software/repository/github/liulizhi1996/HPODNets", "api_url": "https://rseng.github.io/software/api/repos/github/liulizhi1996/HPODNets"}, {"uid": "github/parsotat/batanalysis", "html_url": "https://rseng.github.io/software/repository/github/parsotat/batanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/parsotat/batanalysis"}, {"uid": "github/souradipp76/MM-PoE", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/MM-PoE", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/MM-PoE"}, {"uid": "github/souradipp76/ReadMeReady", "html_url": "https://rseng.github.io/software/repository/github/souradipp76/ReadMeReady", "api_url": "https://rseng.github.io/software/api/repos/github/souradipp76/ReadMeReady"}, {"uid": "github/Libsharp/libsharp", "html_url": "https://rseng.github.io/software/repository/github/Libsharp/libsharp", "api_url": "https://rseng.github.io/software/api/repos/github/Libsharp/libsharp"}, {"uid": "github/tensorlayer/tensorlayer", "html_url": "https://rseng.github.io/software/repository/github/tensorlayer/tensorlayer", "api_url": "https://rseng.github.io/software/api/repos/github/tensorlayer/tensorlayer"}, {"uid": "github/MRCIEU/metaboprep", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/metaboprep", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/metaboprep"}, {"uid": "github/MRCIEU/PHESANT", "html_url": "https://rseng.github.io/software/repository/github/MRCIEU/PHESANT", "api_url": "https://rseng.github.io/software/api/repos/github/MRCIEU/PHESANT"}, {"uid": "github/wullm/zwindstroom", "html_url": "https://rseng.github.io/software/repository/github/wullm/zwindstroom", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/zwindstroom"}, {"uid": "github/wullm/fastdf", "html_url": "https://rseng.github.io/software/repository/github/wullm/fastdf", "api_url": "https://rseng.github.io/software/api/repos/github/wullm/fastdf"}, {"uid": "github/Cascella-Group-UiO/HyMD", "html_url": "https://rseng.github.io/software/repository/github/Cascella-Group-UiO/HyMD", "api_url": "https://rseng.github.io/software/api/repos/github/Cascella-Group-UiO/HyMD"}, {"uid": "github/Sm00thix/IKPLS", "html_url": "https://rseng.github.io/software/repository/github/Sm00thix/IKPLS", "api_url": "https://rseng.github.io/software/api/repos/github/Sm00thix/IKPLS"}, {"uid": "github/vferat/pycrostates", "html_url": "https://rseng.github.io/software/repository/github/vferat/pycrostates", "api_url": "https://rseng.github.io/software/api/repos/github/vferat/pycrostates"}, {"uid": "github/alexlewin24/BLSEM", "html_url": "https://rseng.github.io/software/repository/github/alexlewin24/BLSEM", "api_url": "https://rseng.github.io/software/api/repos/github/alexlewin24/BLSEM"}, {"uid": "github/msaland/THInCR-Suite", "html_url": "https://rseng.github.io/software/repository/github/msaland/THInCR-Suite", "api_url": "https://rseng.github.io/software/api/repos/github/msaland/THInCR-Suite"}, {"uid": "github/hfarias/mask_galaxy", "html_url": "https://rseng.github.io/software/repository/github/hfarias/mask_galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/hfarias/mask_galaxy"}, {"uid": "github/yukiteruono/pbsim2", "html_url": "https://rseng.github.io/software/repository/github/yukiteruono/pbsim2", "api_url": "https://rseng.github.io/software/api/repos/github/yukiteruono/pbsim2"}, {"uid": "github/hpc4cmb/toast", "html_url": "https://rseng.github.io/software/repository/github/hpc4cmb/toast", "api_url": "https://rseng.github.io/software/api/repos/github/hpc4cmb/toast"}, {"uid": "github/ucsbdeepspace/tripp_pipeline", "html_url": "https://rseng.github.io/software/repository/github/ucsbdeepspace/tripp_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ucsbdeepspace/tripp_pipeline"}, {"uid": "github/LSARP/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/LSARP/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/LSARP/ProteomicsQC"}, {"uid": "github/fredericlemoine/goalign", "html_url": "https://rseng.github.io/software/repository/github/fredericlemoine/goalign", "api_url": "https://rseng.github.io/software/api/repos/github/fredericlemoine/goalign"}, {"uid": "github/adrijd/beamconv", "html_url": "https://rseng.github.io/software/repository/github/adrijd/beamconv", "api_url": "https://rseng.github.io/software/api/repos/github/adrijd/beamconv"}, {"uid": "github/stefanradev93/BayesFlow", "html_url": "https://rseng.github.io/software/repository/github/stefanradev93/BayesFlow", "api_url": "https://rseng.github.io/software/api/repos/github/stefanradev93/BayesFlow"}, {"uid": "github/LeoEgidi/pivmet", "html_url": "https://rseng.github.io/software/repository/github/LeoEgidi/pivmet", "api_url": "https://rseng.github.io/software/api/repos/github/LeoEgidi/pivmet"}, {"uid": "github/project-lighter/lighter", "html_url": "https://rseng.github.io/software/repository/github/project-lighter/lighter", "api_url": "https://rseng.github.io/software/api/repos/github/project-lighter/lighter"}, {"uid": "github/opencobra/cobrapy", "html_url": "https://rseng.github.io/software/repository/github/opencobra/cobrapy", "api_url": "https://rseng.github.io/software/api/repos/github/opencobra/cobrapy"}, {"uid": "github/milanofthe/pathsim", "html_url": "https://rseng.github.io/software/repository/github/milanofthe/pathsim", "api_url": "https://rseng.github.io/software/api/repos/github/milanofthe/pathsim"}, {"uid": "github/hsergi/Roman_Coronagraph_ETC", "html_url": "https://rseng.github.io/software/repository/github/hsergi/Roman_Coronagraph_ETC", "api_url": "https://rseng.github.io/software/api/repos/github/hsergi/Roman_Coronagraph_ETC"}, {"uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "html_url": "https://rseng.github.io/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", "api_url": "https://rseng.github.io/software/api/repos/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY"}, {"uid": "github/ymocquar/HOODESolver.jl", "html_url": "https://rseng.github.io/software/repository/github/ymocquar/HOODESolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ymocquar/HOODESolver.jl"}, {"uid": "github/StephenJHardy/SL1M", "html_url": "https://rseng.github.io/software/repository/github/StephenJHardy/SL1M", "api_url": "https://rseng.github.io/software/api/repos/github/StephenJHardy/SL1M"}, {"uid": "github/barklem/abo-cross", "html_url": "https://rseng.github.io/software/repository/github/barklem/abo-cross", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/abo-cross"}, {"uid": "github/barklem/mswavef", "html_url": "https://rseng.github.io/software/repository/github/barklem/mswavef", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/mswavef"}, {"uid": "github/barklem/kaulakys", "html_url": "https://rseng.github.io/software/repository/github/barklem/kaulakys", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/kaulakys"}, {"uid": "github/barklem/hlinop", "html_url": "https://rseng.github.io/software/repository/github/barklem/hlinop", "api_url": "https://rseng.github.io/software/api/repos/github/barklem/hlinop"}, {"uid": "github/longfei8533/SDC", "html_url": "https://rseng.github.io/software/repository/github/longfei8533/SDC", "api_url": "https://rseng.github.io/software/api/repos/github/longfei8533/SDC"}, {"uid": "github/jjmccollum/teiphy", "html_url": "https://rseng.github.io/software/repository/github/jjmccollum/teiphy", "api_url": "https://rseng.github.io/software/api/repos/github/jjmccollum/teiphy"}, {"uid": "github/ryansmcgee/seirsplus", "html_url": "https://rseng.github.io/software/repository/github/ryansmcgee/seirsplus", "api_url": "https://rseng.github.io/software/api/repos/github/ryansmcgee/seirsplus"}, {"uid": "github/kdeck/TTVFast", "html_url": "https://rseng.github.io/software/repository/github/kdeck/TTVFast", "api_url": "https://rseng.github.io/software/api/repos/github/kdeck/TTVFast"}, {"uid": "github/danielapai/bioverse", "html_url": "https://rseng.github.io/software/repository/github/danielapai/bioverse", "api_url": "https://rseng.github.io/software/api/repos/github/danielapai/bioverse"}, {"uid": "github/astrostat/Automark", "html_url": "https://rseng.github.io/software/repository/github/astrostat/Automark", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/Automark"}, {"uid": "github/astrostat/LIRA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/LIRA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/LIRA"}, {"uid": "github/astrostat/BASCS", "html_url": "https://rseng.github.io/software/repository/github/astrostat/BASCS", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/BASCS"}, {"uid": "github/astrostat/TD-CARMA", "html_url": "https://rseng.github.io/software/repository/github/astrostat/TD-CARMA", "api_url": "https://rseng.github.io/software/api/repos/github/astrostat/TD-CARMA"}, {"uid": "github/vgteam/vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg"}, {"uid": "github/vgteam/vg#vg", "html_url": "https://rseng.github.io/software/repository/github/vgteam/vg#vg", "api_url": "https://rseng.github.io/software/api/repos/github/vgteam/vg#vg"}, {"uid": "github/bwengals/CCSNMultivar", "html_url": "https://rseng.github.io/software/repository/github/bwengals/CCSNMultivar", "api_url": "https://rseng.github.io/software/api/repos/github/bwengals/CCSNMultivar"}, {"uid": "github/HARMONI-ELT/HSIM", "html_url": "https://rseng.github.io/software/repository/github/HARMONI-ELT/HSIM", "api_url": "https://rseng.github.io/software/api/repos/github/HARMONI-ELT/HSIM"}, {"uid": "github/nickelnine37/pykronecker", "html_url": "https://rseng.github.io/software/repository/github/nickelnine37/pykronecker", "api_url": "https://rseng.github.io/software/api/repos/github/nickelnine37/pykronecker"}, {"uid": "github/parafields/parafields", "html_url": "https://rseng.github.io/software/repository/github/parafields/parafields", "api_url": "https://rseng.github.io/software/api/repos/github/parafields/parafields"}, {"uid": "github/luinix/pesco", "html_url": "https://rseng.github.io/software/repository/github/luinix/pesco", "api_url": "https://rseng.github.io/software/api/repos/github/luinix/pesco"}, {"uid": "github/bradkav/EarthScatterLikelihood", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthScatterLikelihood", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthScatterLikelihood"}, {"uid": "github/bradkav/DMRadon", "html_url": "https://rseng.github.io/software/repository/github/bradkav/DMRadon", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/DMRadon"}, {"uid": "github/bradkav/AntiparticleDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/AntiparticleDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/AntiparticleDM"}, {"uid": "github/bradkav/EarthShadow", "html_url": "https://rseng.github.io/software/repository/github/bradkav/EarthShadow", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/EarthShadow"}, {"uid": "github/bradkav/WIMpy_NREFT", "html_url": "https://rseng.github.io/software/repository/github/bradkav/WIMpy_NREFT", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/WIMpy_NREFT"}, {"uid": "github/bradkav/runDM", "html_url": "https://rseng.github.io/software/repository/github/bradkav/runDM", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/runDM"}, {"uid": "github/bradkav/CEvNS", "html_url": "https://rseng.github.io/software/repository/github/bradkav/CEvNS", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/CEvNS"}, {"uid": "github/bradkav/BlackHolesDarkDress", "html_url": "https://rseng.github.io/software/repository/github/bradkav/BlackHolesDarkDress", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/BlackHolesDarkDress"}, {"uid": "github/bradkav/verne", "html_url": "https://rseng.github.io/software/repository/github/bradkav/verne", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/verne"}, {"uid": "github/bradkav/NbodyIMRI", "html_url": "https://rseng.github.io/software/repository/github/bradkav/NbodyIMRI", "api_url": "https://rseng.github.io/software/api/repos/github/bradkav/NbodyIMRI"}, {"uid": "github/nlesc-nano/Moka", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/Moka", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/Moka"}, {"uid": "github/nlesc-nano/insilico-server", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/insilico-server", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/insilico-server"}, {"uid": "github/nlesc-nano/flamingo", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/flamingo", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/flamingo"}, {"uid": "github/nlesc-nano/CAT", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/CAT", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/CAT"}, {"uid": "github/nlesc-nano/ceiba-cli", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba-cli", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba-cli"}, {"uid": "github/nlesc-nano/swan", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/swan", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/swan"}, {"uid": "github/nlesc-nano/ceiba", "html_url": "https://rseng.github.io/software/repository/github/nlesc-nano/ceiba", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-nano/ceiba"}, {"uid": "github/maxbernyk/lightcone", "html_url": "https://rseng.github.io/software/repository/github/maxbernyk/lightcone", "api_url": "https://rseng.github.io/software/api/repos/github/maxbernyk/lightcone"}, {"uid": "github/xiaofengsong/pHisPred", "html_url": "https://rseng.github.io/software/repository/github/xiaofengsong/pHisPred", "api_url": "https://rseng.github.io/software/api/repos/github/xiaofengsong/pHisPred"}, {"uid": "github/tardis-sn/carsus", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/carsus", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/carsus"}, {"uid": "github/tardis-sn/stardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/stardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/stardis"}, {"uid": "github/tardis-sn/tardis", "html_url": "https://rseng.github.io/software/repository/github/tardis-sn/tardis", "api_url": "https://rseng.github.io/software/api/repos/github/tardis-sn/tardis"}, {"uid": "github/medbioinf/macpepdb-frontend", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/macpepdb-frontend", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/macpepdb-frontend"}, {"uid": "github/medbioinf/pia", "html_url": "https://rseng.github.io/software/repository/github/medbioinf/pia", "api_url": "https://rseng.github.io/software/api/repos/github/medbioinf/pia"}, {"uid": "github/desmid/mview", "html_url": "https://rseng.github.io/software/repository/github/desmid/mview", "api_url": "https://rseng.github.io/software/api/repos/github/desmid/mview"}, {"uid": "github/aL3x-O-o-Hung/CAT-Net", "html_url": "https://rseng.github.io/software/repository/github/aL3x-O-o-Hung/CAT-Net", "api_url": "https://rseng.github.io/software/api/repos/github/aL3x-O-o-Hung/CAT-Net"}, {"uid": "github/robin-janssen/CODES-Benchmark", "html_url": "https://rseng.github.io/software/repository/github/robin-janssen/CODES-Benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/robin-janssen/CODES-Benchmark"}, {"uid": "github/rhdtownsend/gyre", "html_url": "https://rseng.github.io/software/repository/github/rhdtownsend/gyre", "api_url": "https://rseng.github.io/software/api/repos/github/rhdtownsend/gyre"}, {"uid": "github/snek5000/snek5000", "html_url": "https://rseng.github.io/software/repository/github/snek5000/snek5000", "api_url": "https://rseng.github.io/software/api/repos/github/snek5000/snek5000"}, {"uid": "github/ijuric/MAPS", "html_url": "https://rseng.github.io/software/repository/github/ijuric/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/ijuric/MAPS"}, {"uid": "github/gaelforget/MITgcm.jl", "html_url": "https://rseng.github.io/software/repository/github/gaelforget/MITgcm.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gaelforget/MITgcm.jl"}, {"uid": "github/astrom-tom/dfitspy", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/dfitspy", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/dfitspy"}, {"uid": "github/astrom-tom/specstack", "html_url": "https://rseng.github.io/software/repository/github/astrom-tom/specstack", "api_url": "https://rseng.github.io/software/api/repos/github/astrom-tom/specstack"}, {"uid": "github/numpy/numpy", "html_url": "https://rseng.github.io/software/repository/github/numpy/numpy", "api_url": "https://rseng.github.io/software/api/repos/github/numpy/numpy"}, {"uid": "github/SegataLab/lefse", "html_url": "https://rseng.github.io/software/repository/github/SegataLab/lefse", "api_url": "https://rseng.github.io/software/api/repos/github/SegataLab/lefse"}, {"uid": "github/s4hts/HTStream", "html_url": "https://rseng.github.io/software/repository/github/s4hts/HTStream", "api_url": "https://rseng.github.io/software/api/repos/github/s4hts/HTStream"}, {"uid": "github/hallamlab/TreeSAPP", "html_url": "https://rseng.github.io/software/repository/github/hallamlab/TreeSAPP", "api_url": "https://rseng.github.io/software/api/repos/github/hallamlab/TreeSAPP"}, {"uid": "github/MouseLand/cellpose", "html_url": "https://rseng.github.io/software/repository/github/MouseLand/cellpose", "api_url": "https://rseng.github.io/software/api/repos/github/MouseLand/cellpose"}, {"uid": "github/ismaelpessa/PyMUSE", "html_url": "https://rseng.github.io/software/repository/github/ismaelpessa/PyMUSE", "api_url": "https://rseng.github.io/software/api/repos/github/ismaelpessa/PyMUSE"}, {"uid": "github/bwoshea/ZEUS-MP_2", "html_url": "https://rseng.github.io/software/repository/github/bwoshea/ZEUS-MP_2", "api_url": "https://rseng.github.io/software/api/repos/github/bwoshea/ZEUS-MP_2"}, {"uid": "github/DOnghiaGroup/MGwave", "html_url": "https://rseng.github.io/software/repository/github/DOnghiaGroup/MGwave", "api_url": "https://rseng.github.io/software/api/repos/github/DOnghiaGroup/MGwave"}, {"uid": "github/theLongLab/CATE", "html_url": "https://rseng.github.io/software/repository/github/theLongLab/CATE", "api_url": "https://rseng.github.io/software/api/repos/github/theLongLab/CATE"}, {"uid": "github/devitocodes/devito", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/devito", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/devito"}, {"uid": "github/devitocodes/pyrevolve", "html_url": "https://rseng.github.io/software/repository/github/devitocodes/pyrevolve", "api_url": "https://rseng.github.io/software/api/repos/github/devitocodes/pyrevolve"}, {"uid": "github/aranyics/ReDCM", "html_url": "https://rseng.github.io/software/repository/github/aranyics/ReDCM", "api_url": "https://rseng.github.io/software/api/repos/github/aranyics/ReDCM"}, {"uid": "github/siminegroup/E2EDNA2", "html_url": "https://rseng.github.io/software/repository/github/siminegroup/E2EDNA2", "api_url": "https://rseng.github.io/software/api/repos/github/siminegroup/E2EDNA2"}, {"uid": "github/AnthonyOfSeattle/pyAscoreValidation", "html_url": "https://rseng.github.io/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", "api_url": "https://rseng.github.io/software/api/repos/github/AnthonyOfSeattle/pyAscoreValidation"}, {"uid": "github/nick-youngblut/gtdb_to_taxdump", "html_url": "https://rseng.github.io/software/repository/github/nick-youngblut/gtdb_to_taxdump", "api_url": "https://rseng.github.io/software/api/repos/github/nick-youngblut/gtdb_to_taxdump"}, {"uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", "html_url": "https://rseng.github.io/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", "api_url": "https://rseng.github.io/software/api/repos/github/Critical-Infrastructure-Systems-Lab/PowNet"}, {"uid": "github/nu-radio/NuRadioMC", "html_url": "https://rseng.github.io/software/repository/github/nu-radio/NuRadioMC", "api_url": "https://rseng.github.io/software/api/repos/github/nu-radio/NuRadioMC"}, {"uid": "github/usnistgov/imppy3d", "html_url": "https://rseng.github.io/software/repository/github/usnistgov/imppy3d", "api_url": "https://rseng.github.io/software/api/repos/github/usnistgov/imppy3d"}, {"uid": "github/csabiu/kstat", "html_url": "https://rseng.github.io/software/repository/github/csabiu/kstat", "api_url": "https://rseng.github.io/software/api/repos/github/csabiu/kstat"}, {"uid": "github/jdcphysics/validation", "html_url": "https://rseng.github.io/software/repository/github/jdcphysics/validation", "api_url": "https://rseng.github.io/software/api/repos/github/jdcphysics/validation"}, {"uid": "github/jpuritz/dDocent", "html_url": "https://rseng.github.io/software/repository/github/jpuritz/dDocent", "api_url": "https://rseng.github.io/software/api/repos/github/jpuritz/dDocent"}, {"uid": "github/SJLeo/FFSD", "html_url": "https://rseng.github.io/software/repository/github/SJLeo/FFSD", "api_url": "https://rseng.github.io/software/api/repos/github/SJLeo/FFSD"}, {"uid": "github/MayaWaves/mayawaves", "html_url": "https://rseng.github.io/software/repository/github/MayaWaves/mayawaves", "api_url": "https://rseng.github.io/software/api/repos/github/MayaWaves/mayawaves"}, {"uid": "github/mwalmsley/zoobot", "html_url": "https://rseng.github.io/software/repository/github/mwalmsley/zoobot", "api_url": "https://rseng.github.io/software/api/repos/github/mwalmsley/zoobot"}, {"uid": "github/Lindt8/PHITS-Tools", "html_url": "https://rseng.github.io/software/repository/github/Lindt8/PHITS-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/Lindt8/PHITS-Tools"}, {"uid": "github/sfeeney/ddspectra", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/ddspectra", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/ddspectra"}, {"uid": "github/sfeeney/hh0", "html_url": "https://rseng.github.io/software/repository/github/sfeeney/hh0", "api_url": "https://rseng.github.io/software/api/repos/github/sfeeney/hh0"}, {"uid": "github/swagnercarena/ovejero", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/ovejero", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/ovejero"}, {"uid": "github/swagnercarena/paltas", "html_url": "https://rseng.github.io/software/repository/github/swagnercarena/paltas", "api_url": "https://rseng.github.io/software/api/repos/github/swagnercarena/paltas"}, {"uid": "github/idem-lab/conmat", "html_url": "https://rseng.github.io/software/repository/github/idem-lab/conmat", "api_url": "https://rseng.github.io/software/api/repos/github/idem-lab/conmat"}, {"uid": "github/jeremysanders/ggm", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/ggm", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/ggm"}, {"uid": "github/jeremysanders/xspec_emcee", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/xspec_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/xspec_emcee"}, {"uid": "github/jeremysanders/contbin", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/contbin", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/contbin"}, {"uid": "github/jeremysanders/dsdeproj", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/dsdeproj", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/dsdeproj"}, {"uid": "github/jeremysanders/spex_to_xspec", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/spex_to_xspec", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/spex_to_xspec"}, {"uid": "github/jeremysanders/mbproj2", "html_url": "https://rseng.github.io/software/repository/github/jeremysanders/mbproj2", "api_url": "https://rseng.github.io/software/api/repos/github/jeremysanders/mbproj2"}, {"uid": "github/KonstantinLeyde/light", "html_url": "https://rseng.github.io/software/repository/github/KonstantinLeyde/light", "api_url": "https://rseng.github.io/software/api/repos/github/KonstantinLeyde/light"}, {"uid": "github/jiangyuts/facetclumps", "html_url": "https://rseng.github.io/software/repository/github/jiangyuts/facetclumps", "api_url": "https://rseng.github.io/software/api/repos/github/jiangyuts/facetclumps"}, {"uid": "github/vedantchandra/wdtools", "html_url": "https://rseng.github.io/software/repository/github/vedantchandra/wdtools", "api_url": "https://rseng.github.io/software/api/repos/github/vedantchandra/wdtools"}, {"uid": "github/OpenGene/fastplong", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastplong", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastplong"}, {"uid": "github/OpenGene/fastv", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastv", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastv"}, {"uid": "github/OpenGene/fastp", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/fastp", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/fastp"}, {"uid": "github/OpenGene/repaq", "html_url": "https://rseng.github.io/software/repository/github/OpenGene/repaq", "api_url": "https://rseng.github.io/software/api/repos/github/OpenGene/repaq"}, {"uid": "github/Balaje/iceFem", "html_url": "https://rseng.github.io/software/repository/github/Balaje/iceFem", "api_url": "https://rseng.github.io/software/api/repos/github/Balaje/iceFem"}, {"uid": "github/ropensci-archive/monkeylearn", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/monkeylearn", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/monkeylearn"}, {"uid": "github/ropensci-archive/rodev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/rodev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/rodev"}, {"uid": "github/ropensci-archive/arresteddev", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/arresteddev", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/arresteddev"}, {"uid": "github/ropensci-archive/reviewer", "html_url": "https://rseng.github.io/software/repository/github/ropensci-archive/reviewer", "api_url": "https://rseng.github.io/software/api/repos/github/ropensci-archive/reviewer"}, {"uid": "github/nasa/simupy-flight", "html_url": "https://rseng.github.io/software/repository/github/nasa/simupy-flight", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/simupy-flight"}, {"uid": "github/nasa/ncompare", "html_url": "https://rseng.github.io/software/repository/github/nasa/ncompare", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/ncompare"}, {"uid": "github/nasa/kepler-robovetter", "html_url": "https://rseng.github.io/software/repository/github/nasa/kepler-robovetter", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/kepler-robovetter"}, {"uid": "github/nasa/exoscene", "html_url": "https://rseng.github.io/software/repository/github/nasa/exoscene", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/exoscene"}, {"uid": "github/nasa/Kamodo", "html_url": "https://rseng.github.io/software/repository/github/nasa/Kamodo", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/Kamodo"}, {"uid": "github/nasa/KeplerPORTs", "html_url": "https://rseng.github.io/software/repository/github/nasa/KeplerPORTs", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/KeplerPORTs"}, {"uid": "github/nasa/prog_models", "html_url": "https://rseng.github.io/software/repository/github/nasa/prog_models", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/prog_models"}, {"uid": "github/nasa/K2CE", "html_url": "https://rseng.github.io/software/repository/github/nasa/K2CE", "api_url": "https://rseng.github.io/software/api/repos/github/nasa/K2CE"}, {"uid": "github/RavenGan/GR2D2", "html_url": "https://rseng.github.io/software/repository/github/RavenGan/GR2D2", "api_url": "https://rseng.github.io/software/api/repos/github/RavenGan/GR2D2"}, {"uid": "github/nworbde/dStar", "html_url": "https://rseng.github.io/software/repository/github/nworbde/dStar", "api_url": "https://rseng.github.io/software/api/repos/github/nworbde/dStar"}, {"uid": "github/jean-pierreBoth/gsearch", "html_url": "https://rseng.github.io/software/repository/github/jean-pierreBoth/gsearch", "api_url": "https://rseng.github.io/software/api/repos/github/jean-pierreBoth/gsearch"}, {"uid": "github/labsquare/CutePeaks", "html_url": "https://rseng.github.io/software/repository/github/labsquare/CutePeaks", "api_url": "https://rseng.github.io/software/api/repos/github/labsquare/CutePeaks"}, {"uid": "github/fritzsedlazeck/Sniffles", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/Sniffles", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/Sniffles"}, {"uid": "github/fritzsedlazeck/SURVIVOR", "html_url": "https://rseng.github.io/software/repository/github/fritzsedlazeck/SURVIVOR", "api_url": "https://rseng.github.io/software/api/repos/github/fritzsedlazeck/SURVIVOR"}, {"uid": "github/BIC-MNI/libminc", "html_url": "https://rseng.github.io/software/repository/github/BIC-MNI/libminc", "api_url": "https://rseng.github.io/software/api/repos/github/BIC-MNI/libminc"}, {"uid": "github/cameron314/concurrentqueue", "html_url": "https://rseng.github.io/software/repository/github/cameron314/concurrentqueue", "api_url": "https://rseng.github.io/software/api/repos/github/cameron314/concurrentqueue"}, {"uid": "github/SSDataLab/vetting", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/vetting", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/vetting"}, {"uid": "github/SSDataLab/psfmachine", "html_url": "https://rseng.github.io/software/repository/github/SSDataLab/psfmachine", "api_url": "https://rseng.github.io/software/api/repos/github/SSDataLab/psfmachine"}, {"uid": "github/martibosch/detectree", "html_url": "https://rseng.github.io/software/repository/github/martibosch/detectree", "api_url": "https://rseng.github.io/software/api/repos/github/martibosch/detectree"}, {"uid": "github/soerenslarsen/ISPy3", "html_url": "https://rseng.github.io/software/repository/github/soerenslarsen/ISPy3", "api_url": "https://rseng.github.io/software/api/repos/github/soerenslarsen/ISPy3"}, {"uid": "github/jcorbino/mole", "html_url": "https://rseng.github.io/software/repository/github/jcorbino/mole", "api_url": "https://rseng.github.io/software/api/repos/github/jcorbino/mole"}, {"uid": "github/bokulich-lab/q2-fondue", "html_url": "https://rseng.github.io/software/repository/github/bokulich-lab/q2-fondue", "api_url": "https://rseng.github.io/software/api/repos/github/bokulich-lab/q2-fondue"}, {"uid": "github/bruce-chappell/SunnyNet", "html_url": "https://rseng.github.io/software/repository/github/bruce-chappell/SunnyNet", "api_url": "https://rseng.github.io/software/api/repos/github/bruce-chappell/SunnyNet"}, {"uid": "github/spacetx/starfish", "html_url": "https://rseng.github.io/software/repository/github/spacetx/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/spacetx/starfish"}, {"uid": "github/izsvenezie-virology/FluMut", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/FluMut", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/FluMut"}, {"uid": "github/izsvenezie-virology/genin2", "html_url": "https://rseng.github.io/software/repository/github/izsvenezie-virology/genin2", "api_url": "https://rseng.github.io/software/api/repos/github/izsvenezie-virology/genin2"}, {"uid": "github/LMBooth/pybci", "html_url": "https://rseng.github.io/software/repository/github/LMBooth/pybci", "api_url": "https://rseng.github.io/software/api/repos/github/LMBooth/pybci"}, {"uid": "github/lazzati-astro/MCRaT", "html_url": "https://rseng.github.io/software/repository/github/lazzati-astro/MCRaT", "api_url": "https://rseng.github.io/software/api/repos/github/lazzati-astro/MCRaT"}, {"uid": "github/TNOCS/csWeb", "html_url": "https://rseng.github.io/software/repository/github/TNOCS/csWeb", "api_url": "https://rseng.github.io/software/api/repos/github/TNOCS/csWeb"}, {"uid": "github/FaaSr/FaaSr-package", "html_url": "https://rseng.github.io/software/repository/github/FaaSr/FaaSr-package", "api_url": "https://rseng.github.io/software/api/repos/github/FaaSr/FaaSr-package"}, {"uid": "github/markblokpoel/mathlib", "html_url": "https://rseng.github.io/software/repository/github/markblokpoel/mathlib", "api_url": "https://rseng.github.io/software/api/repos/github/markblokpoel/mathlib"}, {"uid": "github/ChrisBoettner/skaro", "html_url": "https://rseng.github.io/software/repository/github/ChrisBoettner/skaro", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBoettner/skaro"}, {"uid": "github/asancpt/caffsim", "html_url": "https://rseng.github.io/software/repository/github/asancpt/caffsim", "api_url": "https://rseng.github.io/software/api/repos/github/asancpt/caffsim"}, {"uid": "github/brandonckelly/carma_pack", "html_url": "https://rseng.github.io/software/repository/github/brandonckelly/carma_pack", "api_url": "https://rseng.github.io/software/api/repos/github/brandonckelly/carma_pack"}, {"uid": "github/ECP-WarpX/WarpX", "html_url": "https://rseng.github.io/software/repository/github/ECP-WarpX/WarpX", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-WarpX/WarpX"}, {"uid": "github/glass-dev/glass", "html_url": "https://rseng.github.io/software/repository/github/glass-dev/glass", "api_url": "https://rseng.github.io/software/api/repos/github/glass-dev/glass"}, {"uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "html_url": "https://rseng.github.io/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", "api_url": "https://rseng.github.io/software/api/repos/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs"}, {"uid": "github/abmantz/lrgs", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lrgs", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lrgs"}, {"uid": "github/abmantz/lmc", "html_url": "https://rseng.github.io/software/repository/github/abmantz/lmc", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/lmc"}, {"uid": "github/abmantz/rgw", "html_url": "https://rseng.github.io/software/repository/github/abmantz/rgw", "api_url": "https://rseng.github.io/software/api/repos/github/abmantz/rgw"}, {"uid": "github/kritiyer/AngioNet", "html_url": "https://rseng.github.io/software/repository/github/kritiyer/AngioNet", "api_url": "https://rseng.github.io/software/api/repos/github/kritiyer/AngioNet"}, {"uid": "github/mavrix93/LightCurvesClassifier", "html_url": "https://rseng.github.io/software/repository/github/mavrix93/LightCurvesClassifier", "api_url": "https://rseng.github.io/software/api/repos/github/mavrix93/LightCurvesClassifier"}, {"uid": "github/rnikutta/rhocube", "html_url": "https://rseng.github.io/software/repository/github/rnikutta/rhocube", "api_url": "https://rseng.github.io/software/api/repos/github/rnikutta/rhocube"}, {"uid": "github/soundata/soundata", "html_url": "https://rseng.github.io/software/repository/github/soundata/soundata", "api_url": "https://rseng.github.io/software/api/repos/github/soundata/soundata"}, {"uid": "github/Rocsg/FijiRelax", "html_url": "https://rseng.github.io/software/repository/github/Rocsg/FijiRelax", "api_url": "https://rseng.github.io/software/api/repos/github/Rocsg/FijiRelax"}, {"uid": "github/TARGENE/TMLE.jl", "html_url": "https://rseng.github.io/software/repository/github/TARGENE/TMLE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TARGENE/TMLE.jl"}, {"uid": "github/liulei/volks2", "html_url": "https://rseng.github.io/software/repository/github/liulei/volks2", "api_url": "https://rseng.github.io/software/api/repos/github/liulei/volks2"}, {"uid": "github/davek44/Glimmer-MG", "html_url": "https://rseng.github.io/software/repository/github/davek44/Glimmer-MG", "api_url": "https://rseng.github.io/software/api/repos/github/davek44/Glimmer-MG"}, {"uid": "github/myinxd/mcrgnet", "html_url": "https://rseng.github.io/software/repository/github/myinxd/mcrgnet", "api_url": "https://rseng.github.io/software/api/repos/github/myinxd/mcrgnet"}, {"uid": "github/AKHughes1994/polkat", "html_url": "https://rseng.github.io/software/repository/github/AKHughes1994/polkat", "api_url": "https://rseng.github.io/software/api/repos/github/AKHughes1994/polkat"}, {"uid": "github/ester-project/ester", "html_url": "https://rseng.github.io/software/repository/github/ester-project/ester", "api_url": "https://rseng.github.io/software/api/repos/github/ester-project/ester"}, {"uid": "github/OnroerendErfgoed/atramhasis", "html_url": "https://rseng.github.io/software/repository/github/OnroerendErfgoed/atramhasis", "api_url": "https://rseng.github.io/software/api/repos/github/OnroerendErfgoed/atramhasis"}, {"uid": "github/mmahmoudian/sivs", "html_url": "https://rseng.github.io/software/repository/github/mmahmoudian/sivs", "api_url": "https://rseng.github.io/software/api/repos/github/mmahmoudian/sivs"}, {"uid": "github/catherinezucker/radfil", "html_url": "https://rseng.github.io/software/repository/github/catherinezucker/radfil", "api_url": "https://rseng.github.io/software/api/repos/github/catherinezucker/radfil"}, {"uid": "github/GEUS-Glaciology-and-Climate/GrIML", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/GrIML"}, {"uid": "github/GEUS-Glaciology-and-Climate/pypromice", "html_url": "https://rseng.github.io/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", "api_url": "https://rseng.github.io/software/api/repos/github/GEUS-Glaciology-and-Climate/pypromice"}, {"uid": "github/IanHeywood/pony3d", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/pony3d", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/pony3d"}, {"uid": "github/IanHeywood/oxkat", "html_url": "https://rseng.github.io/software/repository/github/IanHeywood/oxkat", "api_url": "https://rseng.github.io/software/api/repos/github/IanHeywood/oxkat"}, {"uid": "github/wilkelab/Opfi", "html_url": "https://rseng.github.io/software/repository/github/wilkelab/Opfi", "api_url": "https://rseng.github.io/software/api/repos/github/wilkelab/Opfi"}, {"uid": "github/MDAnalysis/mdanalysis", "html_url": "https://rseng.github.io/software/repository/github/MDAnalysis/mdanalysis", "api_url": "https://rseng.github.io/software/api/repos/github/MDAnalysis/mdanalysis"}, {"uid": "github/mourisl/Lighter", "html_url": "https://rseng.github.io/software/repository/github/mourisl/Lighter", "api_url": "https://rseng.github.io/software/api/repos/github/mourisl/Lighter"}, {"uid": "github/Chroma-CITI/namosim", "html_url": "https://rseng.github.io/software/repository/github/Chroma-CITI/namosim", "api_url": "https://rseng.github.io/software/api/repos/github/Chroma-CITI/namosim"}, {"uid": "github/MetazoaPhylogenomicsLab/FANTASIA", "html_url": "https://rseng.github.io/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", "api_url": "https://rseng.github.io/software/api/repos/github/MetazoaPhylogenomicsLab/FANTASIA"}, {"uid": "github/mbursa/disk-models", "html_url": "https://rseng.github.io/software/repository/github/mbursa/disk-models", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/disk-models"}, {"uid": "github/mbursa/sim5", "html_url": "https://rseng.github.io/software/repository/github/mbursa/sim5", "api_url": "https://rseng.github.io/software/api/repos/github/mbursa/sim5"}, {"uid": "github/davidhoksza/traveler", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/traveler", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/traveler"}, {"uid": "github/davidhoksza/MolArt", "html_url": "https://rseng.github.io/software/repository/github/davidhoksza/MolArt", "api_url": "https://rseng.github.io/software/api/repos/github/davidhoksza/MolArt"}, {"uid": "github/biocore/deblur", "html_url": "https://rseng.github.io/software/repository/github/biocore/deblur", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/deblur"}, {"uid": "github/biocore/unifrac-binaries", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac-binaries", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac-binaries"}, {"uid": "github/biocore/scikit-bio", "html_url": "https://rseng.github.io/software/repository/github/biocore/scikit-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/scikit-bio"}, {"uid": "github/biocore/unifrac", "html_url": "https://rseng.github.io/software/repository/github/biocore/unifrac", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/unifrac"}, {"uid": "github/biocore/emperor", "html_url": "https://rseng.github.io/software/repository/github/biocore/emperor", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/emperor"}, {"uid": "github/biocore/sortmerna", "html_url": "https://rseng.github.io/software/repository/github/biocore/sortmerna", "api_url": "https://rseng.github.io/software/api/repos/github/biocore/sortmerna"}, {"uid": "github/matthiaslee/Xmatch", "html_url": "https://rseng.github.io/software/repository/github/matthiaslee/Xmatch", "api_url": "https://rseng.github.io/software/api/repos/github/matthiaslee/Xmatch"}, {"uid": "github/ageorgakakis/StructureFunction", "html_url": "https://rseng.github.io/software/repository/github/ageorgakakis/StructureFunction", "api_url": "https://rseng.github.io/software/api/repos/github/ageorgakakis/StructureFunction"}, {"uid": "github/cnellington/Contextualized", "html_url": "https://rseng.github.io/software/repository/github/cnellington/Contextualized", "api_url": "https://rseng.github.io/software/api/repos/github/cnellington/Contextualized"}, {"uid": "github/solids4foam/solids4foam", "html_url": "https://rseng.github.io/software/repository/github/solids4foam/solids4foam", "api_url": "https://rseng.github.io/software/api/repos/github/solids4foam/solids4foam"}, {"uid": "github/matteolucchini1/BHJet", "html_url": "https://rseng.github.io/software/repository/github/matteolucchini1/BHJet", "api_url": "https://rseng.github.io/software/api/repos/github/matteolucchini1/BHJet"}, {"uid": "github/maps-as-data/MapReader", "html_url": "https://rseng.github.io/software/repository/github/maps-as-data/MapReader", "api_url": "https://rseng.github.io/software/api/repos/github/maps-as-data/MapReader"}, {"uid": "github/aobr/gsf", "html_url": "https://rseng.github.io/software/repository/github/aobr/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/aobr/gsf"}, {"uid": "github/NKI-CCB/PRECISE", "html_url": "https://rseng.github.io/software/repository/github/NKI-CCB/PRECISE", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-CCB/PRECISE"}, {"uid": "github/mtakahiro/gsf", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/gsf", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/gsf"}, {"uid": "github/mtakahiro/bbpn", "html_url": "https://rseng.github.io/software/repository/github/mtakahiro/bbpn", "api_url": "https://rseng.github.io/software/api/repos/github/mtakahiro/bbpn"}, {"uid": "github/4pisky/fourpisky-core", "html_url": "https://rseng.github.io/software/repository/github/4pisky/fourpisky-core", "api_url": "https://rseng.github.io/software/api/repos/github/4pisky/fourpisky-core"}, {"uid": "github/SophieMLV/axionHMcode", "html_url": "https://rseng.github.io/software/repository/github/SophieMLV/axionHMcode", "api_url": "https://rseng.github.io/software/api/repos/github/SophieMLV/axionHMcode"}, {"uid": "github/CompNet/Renard", "html_url": "https://rseng.github.io/software/repository/github/CompNet/Renard", "api_url": "https://rseng.github.io/software/api/repos/github/CompNet/Renard"}, {"uid": "github/BorgwardtLab/simbsig", "html_url": "https://rseng.github.io/software/repository/github/BorgwardtLab/simbsig", "api_url": "https://rseng.github.io/software/api/repos/github/BorgwardtLab/simbsig"}, {"uid": "github/devnums/pyheartlib", "html_url": "https://rseng.github.io/software/repository/github/devnums/pyheartlib", "api_url": "https://rseng.github.io/software/api/repos/github/devnums/pyheartlib"}, {"uid": "github/anderslogg/geco", "html_url": "https://rseng.github.io/software/repository/github/anderslogg/geco", "api_url": "https://rseng.github.io/software/api/repos/github/anderslogg/geco"}, {"uid": "github/rorybarnes/EqTide", "html_url": "https://rseng.github.io/software/repository/github/rorybarnes/EqTide", "api_url": "https://rseng.github.io/software/api/repos/github/rorybarnes/EqTide"}, {"uid": "github/kcleal/gw", "html_url": "https://rseng.github.io/software/repository/github/kcleal/gw", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/gw"}, {"uid": "github/kcleal/dysgu", "html_url": "https://rseng.github.io/software/repository/github/kcleal/dysgu", "api_url": "https://rseng.github.io/software/api/repos/github/kcleal/dysgu"}, {"uid": "github/chenjj2/forecaster", "html_url": "https://rseng.github.io/software/repository/github/chenjj2/forecaster", "api_url": "https://rseng.github.io/software/api/repos/github/chenjj2/forecaster"}, {"uid": "github/PlanetHunters/tkmatrix", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/tkmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/tkmatrix"}, {"uid": "github/PlanetHunters/watson", "html_url": "https://rseng.github.io/software/repository/github/PlanetHunters/watson", "api_url": "https://rseng.github.io/software/api/repos/github/PlanetHunters/watson"}, {"uid": "github/clwainwright/CosmoTransitions", "html_url": "https://rseng.github.io/software/repository/github/clwainwright/CosmoTransitions", "api_url": "https://rseng.github.io/software/api/repos/github/clwainwright/CosmoTransitions"}, {"uid": "github/SchedMD/slurm", "html_url": "https://rseng.github.io/software/repository/github/SchedMD/slurm", "api_url": "https://rseng.github.io/software/api/repos/github/SchedMD/slurm"}, {"uid": "github/DorianDepriester/mtex2Gmsh", "html_url": "https://rseng.github.io/software/repository/github/DorianDepriester/mtex2Gmsh", "api_url": "https://rseng.github.io/software/api/repos/github/DorianDepriester/mtex2Gmsh"}, {"uid": "github/motu-tool/mOTUs", "html_url": "https://rseng.github.io/software/repository/github/motu-tool/mOTUs", "api_url": "https://rseng.github.io/software/api/repos/github/motu-tool/mOTUs"}, {"uid": "github/FourierFlows/GeophysicalFlows.jl", "html_url": "https://rseng.github.io/software/repository/github/FourierFlows/GeophysicalFlows.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FourierFlows/GeophysicalFlows.jl"}, {"uid": "github/upb-lea/gym-electric-motor", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/gym-electric-motor", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/gym-electric-motor"}, {"uid": "github/upb-lea/ElectricGrid.jl", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/ElectricGrid.jl", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/ElectricGrid.jl"}, {"uid": "github/upb-lea/openmodelica-microgrid-gym", "html_url": "https://rseng.github.io/software/repository/github/upb-lea/openmodelica-microgrid-gym", "api_url": "https://rseng.github.io/software/api/repos/github/upb-lea/openmodelica-microgrid-gym"}, {"uid": "github/Schulik/aiolos", "html_url": "https://rseng.github.io/software/repository/github/Schulik/aiolos", "api_url": "https://rseng.github.io/software/api/repos/github/Schulik/aiolos"}, {"uid": "github/astropy/astroquery", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroquery", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroquery"}, {"uid": "github/astropy/astropy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astropy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astropy"}, {"uid": "github/astropy/astroplan", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroplan", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroplan"}, {"uid": "github/astropy/SPISEA", "html_url": "https://rseng.github.io/software/repository/github/astropy/SPISEA", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/SPISEA"}, {"uid": "github/astropy/halotools", "html_url": "https://rseng.github.io/software/repository/github/astropy/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/halotools"}, {"uid": "github/astropy/specutils", "html_url": "https://rseng.github.io/software/repository/github/astropy/specutils", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/specutils"}, {"uid": "github/astropy/astroscrappy", "html_url": "https://rseng.github.io/software/repository/github/astropy/astroscrappy", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/astroscrappy"}, {"uid": "github/astropy/ccdproc", "html_url": "https://rseng.github.io/software/repository/github/astropy/ccdproc", "api_url": "https://rseng.github.io/software/api/repos/github/astropy/ccdproc"}, {"uid": "github/Tomoaki-Ishiyama/mpi-rockstar", "html_url": "https://rseng.github.io/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", "api_url": "https://rseng.github.io/software/api/repos/github/Tomoaki-Ishiyama/mpi-rockstar"}, {"uid": "github/gtayana/CVRMS", "html_url": "https://rseng.github.io/software/repository/github/gtayana/CVRMS", "api_url": "https://rseng.github.io/software/api/repos/github/gtayana/CVRMS"}, {"uid": "github/ORNL/icat", "html_url": "https://rseng.github.io/software/repository/github/ORNL/icat", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/icat"}, {"uid": "github/ORNL/AdditiveFOAM", "html_url": "https://rseng.github.io/software/repository/github/ORNL/AdditiveFOAM", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/AdditiveFOAM"}, {"uid": "github/ORNL/tx2", "html_url": "https://rseng.github.io/software/repository/github/ORNL/tx2", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/tx2"}, {"uid": "github/ORNL/curifactory", "html_url": "https://rseng.github.io/software/repository/github/ORNL/curifactory", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/curifactory"}, {"uid": "github/ORNL/Equilipy", "html_url": "https://rseng.github.io/software/repository/github/ORNL/Equilipy", "api_url": "https://rseng.github.io/software/api/repos/github/ORNL/Equilipy"}, {"uid": "github/biomedia-mira/istn", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/istn", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/istn"}, {"uid": "github/biomedia-mira/masf", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/masf", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/masf"}, {"uid": "github/biomedia-mira/deepscm", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/deepscm", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/deepscm"}, {"uid": "github/biomedia-mira/drop2", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/drop2", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/drop2"}, {"uid": "github/biomedia-mira/blast-ct", "html_url": "https://rseng.github.io/software/repository/github/biomedia-mira/blast-ct", "api_url": "https://rseng.github.io/software/api/repos/github/biomedia-mira/blast-ct"}, {"uid": "github/NKI-AI/direct", "html_url": "https://rseng.github.io/software/repository/github/NKI-AI/direct", "api_url": "https://rseng.github.io/software/api/repos/github/NKI-AI/direct"}, {"uid": "github/e-mental-health/data-processing", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/data-processing", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/data-processing"}, {"uid": "github/e-mental-health/orange-hackathon", "html_url": "https://rseng.github.io/software/repository/github/e-mental-health/orange-hackathon", "api_url": "https://rseng.github.io/software/api/repos/github/e-mental-health/orange-hackathon"}, {"uid": "github/bulik/ldsc", "html_url": "https://rseng.github.io/software/repository/github/bulik/ldsc", "api_url": "https://rseng.github.io/software/api/repos/github/bulik/ldsc"}, {"uid": "github/mkunimoto/LEO-vetter", "html_url": "https://rseng.github.io/software/repository/github/mkunimoto/LEO-vetter", "api_url": "https://rseng.github.io/software/api/repos/github/mkunimoto/LEO-vetter"}, {"uid": "github/alvinxhan/Phydelity", "html_url": "https://rseng.github.io/software/repository/github/alvinxhan/Phydelity", "api_url": "https://rseng.github.io/software/api/repos/github/alvinxhan/Phydelity"}, {"uid": "github/james-m-osborn/astrosat", "html_url": "https://rseng.github.io/software/repository/github/james-m-osborn/astrosat", "api_url": "https://rseng.github.io/software/api/repos/github/james-m-osborn/astrosat"}, {"uid": "github/MaudeDavidLab/GMEmbeddings", "html_url": "https://rseng.github.io/software/repository/github/MaudeDavidLab/GMEmbeddings", "api_url": "https://rseng.github.io/software/api/repos/github/MaudeDavidLab/GMEmbeddings"}, {"uid": "github/svi-opensource/libics", "html_url": "https://rseng.github.io/software/repository/github/svi-opensource/libics", "api_url": "https://rseng.github.io/software/api/repos/github/svi-opensource/libics"}, {"uid": "github/lys-devel/lys", "html_url": "https://rseng.github.io/software/repository/github/lys-devel/lys", "api_url": "https://rseng.github.io/software/api/repos/github/lys-devel/lys"}, {"uid": "github/pennucci/PulsePortraiture", "html_url": "https://rseng.github.io/software/repository/github/pennucci/PulsePortraiture", "api_url": "https://rseng.github.io/software/api/repos/github/pennucci/PulsePortraiture"}, {"uid": "github/spastras/galclass", "html_url": "https://rseng.github.io/software/repository/github/spastras/galclass", "api_url": "https://rseng.github.io/software/api/repos/github/spastras/galclass"}, {"uid": "github/nkallima/sim-universal-construction", "html_url": "https://rseng.github.io/software/repository/github/nkallima/sim-universal-construction", "api_url": "https://rseng.github.io/software/api/repos/github/nkallima/sim-universal-construction"}, {"uid": "github/ecological-cities/home2park", "html_url": "https://rseng.github.io/software/repository/github/ecological-cities/home2park", "api_url": "https://rseng.github.io/software/api/repos/github/ecological-cities/home2park"}, {"uid": "github/vinisalazar/metaphor", "html_url": "https://rseng.github.io/software/repository/github/vinisalazar/metaphor", "api_url": "https://rseng.github.io/software/api/repos/github/vinisalazar/metaphor"}, {"uid": "github/VicidominiLab/BrightEyes-MCS", "html_url": "https://rseng.github.io/software/repository/github/VicidominiLab/BrightEyes-MCS", "api_url": "https://rseng.github.io/software/api/repos/github/VicidominiLab/BrightEyes-MCS"}, {"uid": "github/saopicc/DDFacet", "html_url": "https://rseng.github.io/software/repository/github/saopicc/DDFacet", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/DDFacet"}, {"uid": "github/saopicc/killMS", "html_url": "https://rseng.github.io/software/repository/github/saopicc/killMS", "api_url": "https://rseng.github.io/software/api/repos/github/saopicc/killMS"}, {"uid": "github/cjcollin37/IsoFATE", "html_url": "https://rseng.github.io/software/repository/github/cjcollin37/IsoFATE", "api_url": "https://rseng.github.io/software/api/repos/github/cjcollin37/IsoFATE"}, {"uid": "github/simon-smart88/shinyscholar", "html_url": "https://rseng.github.io/software/repository/github/simon-smart88/shinyscholar", "api_url": "https://rseng.github.io/software/api/repos/github/simon-smart88/shinyscholar"}, {"uid": "github/astro-informatics/s2fft", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2fft", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2fft"}, {"uid": "github/astro-informatics/s2", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2"}, {"uid": "github/astro-informatics/sleplet", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/sleplet", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/sleplet"}, {"uid": "github/astro-informatics/QuantifAI", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/QuantifAI", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/QuantifAI"}, {"uid": "github/astro-informatics/massmappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/massmappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/massmappy"}, {"uid": "github/astro-informatics/flag-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flag-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flag-archive"}, {"uid": "github/astro-informatics/ssht", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/ssht", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/ssht"}, {"uid": "github/astro-informatics/harmonic", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/harmonic", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/harmonic"}, {"uid": "github/astro-informatics/DarkMappy", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/DarkMappy", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/DarkMappy"}, {"uid": "github/astro-informatics/comb", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/comb", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/comb"}, {"uid": "github/astro-informatics/s2let", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/s2let", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/s2let"}, {"uid": "github/astro-informatics/stringgen", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/stringgen", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/stringgen"}, {"uid": "github/astro-informatics/RequiSim", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/RequiSim", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/RequiSim"}, {"uid": "github/astro-informatics/flaglet-archive", "html_url": "https://rseng.github.io/software/repository/github/astro-informatics/flaglet-archive", "api_url": "https://rseng.github.io/software/api/repos/github/astro-informatics/flaglet-archive"}, {"uid": "github/AgrDataSci/climatrends", "html_url": "https://rseng.github.io/software/repository/github/AgrDataSci/climatrends", "api_url": "https://rseng.github.io/software/api/repos/github/AgrDataSci/climatrends"}, {"uid": "github/vojtech-sidorin/quickclump", "html_url": "https://rseng.github.io/software/repository/github/vojtech-sidorin/quickclump", "api_url": "https://rseng.github.io/software/api/repos/github/vojtech-sidorin/quickclump"}, {"uid": "github/DrexelLenser/Lenser", "html_url": "https://rseng.github.io/software/repository/github/DrexelLenser/Lenser", "api_url": "https://rseng.github.io/software/api/repos/github/DrexelLenser/Lenser"}, {"uid": "github/tum-esm/pyra", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/pyra", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/pyra"}, {"uid": "github/tum-esm/ivy", "html_url": "https://rseng.github.io/software/repository/github/tum-esm/ivy", "api_url": "https://rseng.github.io/software/api/repos/github/tum-esm/ivy"}, {"uid": "github/sbraden/circle-craters", "html_url": "https://rseng.github.io/software/repository/github/sbraden/circle-craters", "api_url": "https://rseng.github.io/software/api/repos/github/sbraden/circle-craters"}, {"uid": "github/zonca/dst", "html_url": "https://rseng.github.io/software/repository/github/zonca/dst", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/dst"}, {"uid": "github/zonca/python-qucs", "html_url": "https://rseng.github.io/software/repository/github/zonca/python-qucs", "api_url": "https://rseng.github.io/software/api/repos/github/zonca/python-qucs"}, {"uid": "github/jeffdaily/parasail-python", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail-python", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail-python"}, {"uid": "github/jeffdaily/parasail", "html_url": "https://rseng.github.io/software/repository/github/jeffdaily/parasail", "api_url": "https://rseng.github.io/software/api/repos/github/jeffdaily/parasail"}, {"uid": "github/temuller/hostphot", "html_url": "https://rseng.github.io/software/repository/github/temuller/hostphot", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/hostphot"}, {"uid": "github/temuller/piscola", "html_url": "https://rseng.github.io/software/repository/github/temuller/piscola", "api_url": "https://rseng.github.io/software/api/repos/github/temuller/piscola"}, {"uid": "github/MASILab/pyPheWAS", "html_url": "https://rseng.github.io/software/repository/github/MASILab/pyPheWAS", "api_url": "https://rseng.github.io/software/api/repos/github/MASILab/pyPheWAS"}, {"uid": "github/ChemaPalencia/M_SMiLe", "html_url": "https://rseng.github.io/software/repository/github/ChemaPalencia/M_SMiLe", "api_url": "https://rseng.github.io/software/api/repos/github/ChemaPalencia/M_SMiLe"}, {"uid": "github/smirik/resonances", "html_url": "https://rseng.github.io/software/repository/github/smirik/resonances", "api_url": "https://rseng.github.io/software/api/repos/github/smirik/resonances"}, {"uid": "github/nombac/optab", "html_url": "https://rseng.github.io/software/repository/github/nombac/optab", "api_url": "https://rseng.github.io/software/api/repos/github/nombac/optab"}, {"uid": "github/putonti/virmine", "html_url": "https://rseng.github.io/software/repository/github/putonti/virmine", "api_url": "https://rseng.github.io/software/api/repos/github/putonti/virmine"}, {"uid": "github/JuliaOcean/AIBECS.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/AIBECS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/AIBECS.jl"}, {"uid": "github/JuliaOcean/PlanktonIndividuals.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOcean/PlanktonIndividuals.jl"}, {"uid": "github/zkdtc/MLC_ELGs", "html_url": "https://rseng.github.io/software/repository/github/zkdtc/MLC_ELGs", "api_url": "https://rseng.github.io/software/api/repos/github/zkdtc/MLC_ELGs"}, {"uid": "github/samwaseda/mamonca", "html_url": "https://rseng.github.io/software/repository/github/samwaseda/mamonca", "api_url": "https://rseng.github.io/software/api/repos/github/samwaseda/mamonca"}, {"uid": "github/snystrom/memes", "html_url": "https://rseng.github.io/software/repository/github/snystrom/memes", "api_url": "https://rseng.github.io/software/api/repos/github/snystrom/memes"}, {"uid": "github/JSB-UCLA/scPNMF", "html_url": "https://rseng.github.io/software/repository/github/JSB-UCLA/scPNMF", "api_url": "https://rseng.github.io/software/api/repos/github/JSB-UCLA/scPNMF"}, {"uid": "github/moustakas/iSEDfit", "html_url": "https://rseng.github.io/software/repository/github/moustakas/iSEDfit", "api_url": "https://rseng.github.io/software/api/repos/github/moustakas/iSEDfit"}, {"uid": "github/adammoss/supernovae", "html_url": "https://rseng.github.io/software/repository/github/adammoss/supernovae", "api_url": "https://rseng.github.io/software/api/repos/github/adammoss/supernovae"}, {"uid": "github/isglobal-brge/dsExposome", "html_url": "https://rseng.github.io/software/repository/github/isglobal-brge/dsExposome", "api_url": "https://rseng.github.io/software/api/repos/github/isglobal-brge/dsExposome"}, {"uid": "github/scrook/neuroml-db", "html_url": "https://rseng.github.io/software/repository/github/scrook/neuroml-db", "api_url": "https://rseng.github.io/software/api/repos/github/scrook/neuroml-db"}, {"uid": "github/dmentipl/plonk", "html_url": "https://rseng.github.io/software/repository/github/dmentipl/plonk", "api_url": "https://rseng.github.io/software/api/repos/github/dmentipl/plonk"}, {"uid": "github/zhang-zhixiang/spectool", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/spectool", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/spectool"}, {"uid": "github/zhang-zhixiang/stellarSpecModel", "html_url": "https://rseng.github.io/software/repository/github/zhang-zhixiang/stellarSpecModel", "api_url": "https://rseng.github.io/software/api/repos/github/zhang-zhixiang/stellarSpecModel"}, {"uid": "github/emhuff/Balrog", "html_url": "https://rseng.github.io/software/repository/github/emhuff/Balrog", "api_url": "https://rseng.github.io/software/api/repos/github/emhuff/Balrog"}, {"uid": "github/johnh2o2/cuvarbase", "html_url": "https://rseng.github.io/software/repository/github/johnh2o2/cuvarbase", "api_url": "https://rseng.github.io/software/api/repos/github/johnh2o2/cuvarbase"}, {"uid": "github/prolfqua/prolfquapp", "html_url": "https://rseng.github.io/software/repository/github/prolfqua/prolfquapp", "api_url": "https://rseng.github.io/software/api/repos/github/prolfqua/prolfquapp"}, {"uid": "github/pontoppi/radlite", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/radlite", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/radlite"}, {"uid": "github/pontoppi/ctool", "html_url": "https://rseng.github.io/software/repository/github/pontoppi/ctool", "api_url": "https://rseng.github.io/software/api/repos/github/pontoppi/ctool"}, {"uid": "github/tolkit/telomeric-identifier", "html_url": "https://rseng.github.io/software/repository/github/tolkit/telomeric-identifier", "api_url": "https://rseng.github.io/software/api/repos/github/tolkit/telomeric-identifier"}, {"uid": "github/pyxnat/pyxnat", "html_url": "https://rseng.github.io/software/repository/github/pyxnat/pyxnat", "api_url": "https://rseng.github.io/software/api/repos/github/pyxnat/pyxnat"}, {"uid": "github/SpyDust/SpyDust", "html_url": "https://rseng.github.io/software/repository/github/SpyDust/SpyDust", "api_url": "https://rseng.github.io/software/api/repos/github/SpyDust/SpyDust"}, {"uid": "github/JuliaGeometry/DelaunayTriangulation.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeometry/DelaunayTriangulation.jl"}, {"uid": "github/Dfam-consortium/RepeatModeler", "html_url": "https://rseng.github.io/software/repository/github/Dfam-consortium/RepeatModeler", "api_url": "https://rseng.github.io/software/api/repos/github/Dfam-consortium/RepeatModeler"}, {"uid": "github/dvallesp/vortex", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex"}, {"uid": "github/dvallesp/asohf", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/asohf", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/asohf"}, {"uid": "github/dvallesp/vortex-p", "html_url": "https://rseng.github.io/software/repository/github/dvallesp/vortex-p", "api_url": "https://rseng.github.io/software/api/repos/github/dvallesp/vortex-p"}, {"uid": "github/nexml/nexml.java", "html_url": "https://rseng.github.io/software/repository/github/nexml/nexml.java", "api_url": "https://rseng.github.io/software/api/repos/github/nexml/nexml.java"}, {"uid": "github/fwhigh/stellar-locus-regression", "html_url": "https://rseng.github.io/software/repository/github/fwhigh/stellar-locus-regression", "api_url": "https://rseng.github.io/software/api/repos/github/fwhigh/stellar-locus-regression"}, {"uid": "github/vishwas1984/LaplaceInterpolation.jl", "html_url": "https://rseng.github.io/software/repository/github/vishwas1984/LaplaceInterpolation.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vishwas1984/LaplaceInterpolation.jl"}, {"uid": "github/intake/intake", "html_url": "https://rseng.github.io/software/repository/github/intake/intake", "api_url": "https://rseng.github.io/software/api/repos/github/intake/intake"}, {"uid": "github/simonbesnard1/gedidb", "html_url": "https://rseng.github.io/software/repository/github/simonbesnard1/gedidb", "api_url": "https://rseng.github.io/software/api/repos/github/simonbesnard1/gedidb"}, {"uid": "github/girder/viime", "html_url": "https://rseng.github.io/software/repository/github/girder/viime", "api_url": "https://rseng.github.io/software/api/repos/github/girder/viime"}, {"uid": "github/galactic-ai/haloflow", "html_url": "https://rseng.github.io/software/repository/github/galactic-ai/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/galactic-ai/haloflow"}, {"uid": "github/SysBioUAB/hpi_predictor", "html_url": "https://rseng.github.io/software/repository/github/SysBioUAB/hpi_predictor", "api_url": "https://rseng.github.io/software/api/repos/github/SysBioUAB/hpi_predictor"}, {"uid": "github/james-trayford/strauss", "html_url": "https://rseng.github.io/software/repository/github/james-trayford/strauss", "api_url": "https://rseng.github.io/software/api/repos/github/james-trayford/strauss"}, {"uid": "github/HUPO-PSI/mzspeclib-py", "html_url": "https://rseng.github.io/software/repository/github/HUPO-PSI/mzspeclib-py", "api_url": "https://rseng.github.io/software/api/repos/github/HUPO-PSI/mzspeclib-py"}, {"uid": "github/leonardlab/COMET", "html_url": "https://rseng.github.io/software/repository/github/leonardlab/COMET", "api_url": "https://rseng.github.io/software/api/repos/github/leonardlab/COMET"}, {"uid": "github/kieranatkins/silique-detector", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/silique-detector", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/silique-detector"}, {"uid": "github/kieranatkins/gimp-image-annotator", "html_url": "https://rseng.github.io/software/repository/github/kieranatkins/gimp-image-annotator", "api_url": "https://rseng.github.io/software/api/repos/github/kieranatkins/gimp-image-annotator"}, {"uid": "github/cwieder/py-ssPA", "html_url": "https://rseng.github.io/software/repository/github/cwieder/py-ssPA", "api_url": "https://rseng.github.io/software/api/repos/github/cwieder/py-ssPA"}, {"uid": "github/mbonav/Exo_DMC", "html_url": "https://rseng.github.io/software/repository/github/mbonav/Exo_DMC", "api_url": "https://rseng.github.io/software/api/repos/github/mbonav/Exo_DMC"}, {"uid": "github/tensorly/viz", "html_url": "https://rseng.github.io/software/repository/github/tensorly/viz", "api_url": "https://rseng.github.io/software/api/repos/github/tensorly/viz"}, {"uid": "github/yrkhalil/SPIBACK", "html_url": "https://rseng.github.io/software/repository/github/yrkhalil/SPIBACK", "api_url": "https://rseng.github.io/software/api/repos/github/yrkhalil/SPIBACK"}, {"uid": "github/LiuJJ0327/CCPE", "html_url": "https://rseng.github.io/software/repository/github/LiuJJ0327/CCPE", "api_url": "https://rseng.github.io/software/api/repos/github/LiuJJ0327/CCPE"}, {"uid": "github/gnudatalanguage/gdl", "html_url": "https://rseng.github.io/software/repository/github/gnudatalanguage/gdl", "api_url": "https://rseng.github.io/software/api/repos/github/gnudatalanguage/gdl"}, {"uid": "github/secimTools/SECIMTools", "html_url": "https://rseng.github.io/software/repository/github/secimTools/SECIMTools", "api_url": "https://rseng.github.io/software/api/repos/github/secimTools/SECIMTools"}, {"uid": "github/biaslab/RxInfer.jl", "html_url": "https://rseng.github.io/software/repository/github/biaslab/RxInfer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/biaslab/RxInfer.jl"}, {"uid": "github/containers/podman", "html_url": "https://rseng.github.io/software/repository/github/containers/podman", "api_url": "https://rseng.github.io/software/api/repos/github/containers/podman"}, {"uid": "github/theosanderson/chronumental", "html_url": "https://rseng.github.io/software/repository/github/theosanderson/chronumental", "api_url": "https://rseng.github.io/software/api/repos/github/theosanderson/chronumental"}, {"uid": "github/mchalela/GriSPy", "html_url": "https://rseng.github.io/software/repository/github/mchalela/GriSPy", "api_url": "https://rseng.github.io/software/api/repos/github/mchalela/GriSPy"}, {"uid": "github/hover2pi/SEDkit", "html_url": "https://rseng.github.io/software/repository/github/hover2pi/SEDkit", "api_url": "https://rseng.github.io/software/api/repos/github/hover2pi/SEDkit"}, {"uid": "github/kno10/python-kmedoids", "html_url": "https://rseng.github.io/software/repository/github/kno10/python-kmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/kno10/python-kmedoids"}, {"uid": "github/abacusorg/zeldovich-PLT", "html_url": "https://rseng.github.io/software/repository/github/abacusorg/zeldovich-PLT", "api_url": "https://rseng.github.io/software/api/repos/github/abacusorg/zeldovich-PLT"}, {"uid": "github/mirnylab/pairtools", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/pairtools"}, {"uid": "github/mirnylab/cooler", "html_url": "https://rseng.github.io/software/repository/github/mirnylab/cooler", "api_url": "https://rseng.github.io/software/api/repos/github/mirnylab/cooler"}, {"uid": "github/tariqdaouda/CAMAP", "html_url": "https://rseng.github.io/software/repository/github/tariqdaouda/CAMAP", "api_url": "https://rseng.github.io/software/api/repos/github/tariqdaouda/CAMAP"}, {"uid": "github/psheehan/pdspy", "html_url": "https://rseng.github.io/software/repository/github/psheehan/pdspy", "api_url": "https://rseng.github.io/software/api/repos/github/psheehan/pdspy"}, {"uid": "github/nadvornikjiri/HiSS-Cube", "html_url": "https://rseng.github.io/software/repository/github/nadvornikjiri/HiSS-Cube", "api_url": "https://rseng.github.io/software/api/repos/github/nadvornikjiri/HiSS-Cube"}, {"uid": "github/fgerick/Limace.jl", "html_url": "https://rseng.github.io/software/repository/github/fgerick/Limace.jl", "api_url": "https://rseng.github.io/software/api/repos/github/fgerick/Limace.jl"}, {"uid": "github/PFPE/shipgrav", "html_url": "https://rseng.github.io/software/repository/github/PFPE/shipgrav", "api_url": "https://rseng.github.io/software/api/repos/github/PFPE/shipgrav"}, {"uid": "github/easybuilders/easybuild", "html_url": "https://rseng.github.io/software/repository/github/easybuilders/easybuild", "api_url": "https://rseng.github.io/software/api/repos/github/easybuilders/easybuild"}, {"uid": "github/UCL/rmcmc", "html_url": "https://rseng.github.io/software/repository/github/UCL/rmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/UCL/rmcmc"}, {"uid": "github/rasg-affiliates/healvis", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/healvis", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/healvis"}, {"uid": "github/rasg-affiliates/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/rasg-affiliates/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/rasg-affiliates/21cmSense"}, {"uid": "github/Markusjsommer/BalrogCPP", "html_url": "https://rseng.github.io/software/repository/github/Markusjsommer/BalrogCPP", "api_url": "https://rseng.github.io/software/api/repos/github/Markusjsommer/BalrogCPP"}, {"uid": "github/ictr/covid19-outbreak-simulator", "html_url": "https://rseng.github.io/software/repository/github/ictr/covid19-outbreak-simulator", "api_url": "https://rseng.github.io/software/api/repos/github/ictr/covid19-outbreak-simulator"}, {"uid": "github/mecobpsu/bacseq", "html_url": "https://rseng.github.io/software/repository/github/mecobpsu/bacseq", "api_url": "https://rseng.github.io/software/api/repos/github/mecobpsu/bacseq"}, {"uid": "github/cdominik/optool", "html_url": "https://rseng.github.io/software/repository/github/cdominik/optool", "api_url": "https://rseng.github.io/software/api/repos/github/cdominik/optool"}, {"uid": "github/sheryl-ai/MetaPred", "html_url": "https://rseng.github.io/software/repository/github/sheryl-ai/MetaPred", "api_url": "https://rseng.github.io/software/api/repos/github/sheryl-ai/MetaPred"}, {"uid": "github/hanyue36/nanoplexer", "html_url": "https://rseng.github.io/software/repository/github/hanyue36/nanoplexer", "api_url": "https://rseng.github.io/software/api/repos/github/hanyue36/nanoplexer"}, {"uid": "github/christiangil/StellarSpectraObservationFitting.jl", "html_url": "https://rseng.github.io/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/christiangil/StellarSpectraObservationFitting.jl"}, {"uid": "github/berenslab/fundus_image_toolbox", "html_url": "https://rseng.github.io/software/repository/github/berenslab/fundus_image_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/fundus_image_toolbox"}, {"uid": "github/berenslab/MorphoPy", "html_url": "https://rseng.github.io/software/repository/github/berenslab/MorphoPy", "api_url": "https://rseng.github.io/software/api/repos/github/berenslab/MorphoPy"}, {"uid": "github/lnasellentin/DALI", "html_url": "https://rseng.github.io/software/repository/github/lnasellentin/DALI", "api_url": "https://rseng.github.io/software/api/repos/github/lnasellentin/DALI"}, {"uid": "github/walaj/svaba", "html_url": "https://rseng.github.io/software/repository/github/walaj/svaba", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/svaba"}, {"uid": "github/walaj/SeqLib", "html_url": "https://rseng.github.io/software/repository/github/walaj/SeqLib", "api_url": "https://rseng.github.io/software/api/repos/github/walaj/SeqLib"}, {"uid": "github/GabrielaCR/AGNfitter", "html_url": "https://rseng.github.io/software/repository/github/GabrielaCR/AGNfitter", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielaCR/AGNfitter"}, {"uid": "github/tidyverse/ggplot2", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/ggplot2", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/ggplot2"}, {"uid": "github/tidyverse/glue", "html_url": "https://rseng.github.io/software/repository/github/tidyverse/glue", "api_url": "https://rseng.github.io/software/api/repos/github/tidyverse/glue"}, {"uid": "github/gianthk/ciclope", "html_url": "https://rseng.github.io/software/repository/github/gianthk/ciclope", "api_url": "https://rseng.github.io/software/api/repos/github/gianthk/ciclope"}, {"uid": "github/esheldon/ngmix", "html_url": "https://rseng.github.io/software/repository/github/esheldon/ngmix", "api_url": "https://rseng.github.io/software/api/repos/github/esheldon/ngmix"}, {"uid": "github/aibhleog/baryon-sweep", "html_url": "https://rseng.github.io/software/repository/github/aibhleog/baryon-sweep", "api_url": "https://rseng.github.io/software/api/repos/github/aibhleog/baryon-sweep"}, {"uid": "github/python-streamz/streamz", "html_url": "https://rseng.github.io/software/repository/github/python-streamz/streamz", "api_url": "https://rseng.github.io/software/api/repos/github/python-streamz/streamz"}, {"uid": "github/widdowquinn/pyani", "html_url": "https://rseng.github.io/software/repository/github/widdowquinn/pyani", "api_url": "https://rseng.github.io/software/api/repos/github/widdowquinn/pyani"}, {"uid": "github/Pometry/Raphtory", "html_url": "https://rseng.github.io/software/repository/github/Pometry/Raphtory", "api_url": "https://rseng.github.io/software/api/repos/github/Pometry/Raphtory"}, {"uid": "github/caimeng2/seesus", "html_url": "https://rseng.github.io/software/repository/github/caimeng2/seesus", "api_url": "https://rseng.github.io/software/api/repos/github/caimeng2/seesus"}, {"uid": "github/ndrakos/ICICLE", "html_url": "https://rseng.github.io/software/repository/github/ndrakos/ICICLE", "api_url": "https://rseng.github.io/software/api/repos/github/ndrakos/ICICLE"}, {"uid": "github/etal/cnvkit", "html_url": "https://rseng.github.io/software/repository/github/etal/cnvkit", "api_url": "https://rseng.github.io/software/api/repos/github/etal/cnvkit"}, {"uid": "github/Yash-10/beta-sgp", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/beta-sgp", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/beta-sgp"}, {"uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "html_url": "https://rseng.github.io/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection"}, {"uid": "github/CIBERER/nf-CBRA-snvs", "html_url": "https://rseng.github.io/software/repository/github/CIBERER/nf-CBRA-snvs", "api_url": "https://rseng.github.io/software/api/repos/github/CIBERER/nf-CBRA-snvs"}, {"uid": "github/HKU-BAL/Clair3", "html_url": "https://rseng.github.io/software/repository/github/HKU-BAL/Clair3", "api_url": "https://rseng.github.io/software/api/repos/github/HKU-BAL/Clair3"}, {"uid": "github/robynlm/ebweyl", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ebweyl", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ebweyl"}, {"uid": "github/robynlm/sphereint", "html_url": "https://rseng.github.io/software/repository/github/robynlm/sphereint", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/sphereint"}, {"uid": "github/robynlm/ICPertFLRW", "html_url": "https://rseng.github.io/software/repository/github/robynlm/ICPertFLRW", "api_url": "https://rseng.github.io/software/api/repos/github/robynlm/ICPertFLRW"}, {"uid": "github/facom/tidev", "html_url": "https://rseng.github.io/software/repository/github/facom/tidev", "api_url": "https://rseng.github.io/software/api/repos/github/facom/tidev"}, {"uid": "github/facom/BHMcalc", "html_url": "https://rseng.github.io/software/repository/github/facom/BHMcalc", "api_url": "https://rseng.github.io/software/api/repos/github/facom/BHMcalc"}, {"uid": "github/facom/exorings", "html_url": "https://rseng.github.io/software/repository/github/facom/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/facom/exorings"}, {"uid": "github/ngbusca/QuasarNET", "html_url": "https://rseng.github.io/software/repository/github/ngbusca/QuasarNET", "api_url": "https://rseng.github.io/software/api/repos/github/ngbusca/QuasarNET"}, {"uid": "github/jonas/tig", "html_url": "https://rseng.github.io/software/repository/github/jonas/tig", "api_url": "https://rseng.github.io/software/api/repos/github/jonas/tig"}, {"uid": "github/tcherninceline/PPInteractions", "html_url": "https://rseng.github.io/software/repository/github/tcherninceline/PPInteractions", "api_url": "https://rseng.github.io/software/api/repos/github/tcherninceline/PPInteractions"}, {"uid": "github/xmuyulab/DreamDIA-XMBD", "html_url": "https://rseng.github.io/software/repository/github/xmuyulab/DreamDIA-XMBD", "api_url": "https://rseng.github.io/software/api/repos/github/xmuyulab/DreamDIA-XMBD"}, {"uid": "github/klb2/qmkpy", "html_url": "https://rseng.github.io/software/repository/github/klb2/qmkpy", "api_url": "https://rseng.github.io/software/api/repos/github/klb2/qmkpy"}, {"uid": "github/mjrfringes/haystacks", "html_url": "https://rseng.github.io/software/repository/github/mjrfringes/haystacks", "api_url": "https://rseng.github.io/software/api/repos/github/mjrfringes/haystacks"}, {"uid": "github/mifumagalli/cluster-cloc", "html_url": "https://rseng.github.io/software/repository/github/mifumagalli/cluster-cloc", "api_url": "https://rseng.github.io/software/api/repos/github/mifumagalli/cluster-cloc"}, {"uid": "github/fermisurfaces/IFermi", "html_url": "https://rseng.github.io/software/repository/github/fermisurfaces/IFermi", "api_url": "https://rseng.github.io/software/api/repos/github/fermisurfaces/IFermi"}, {"uid": "github/wchenastro/Mosaic", "html_url": "https://rseng.github.io/software/repository/github/wchenastro/Mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/wchenastro/Mosaic"}, {"uid": "github/felixbosco/KeplerFit", "html_url": "https://rseng.github.io/software/repository/github/felixbosco/KeplerFit", "api_url": "https://rseng.github.io/software/api/repos/github/felixbosco/KeplerFit"}, {"uid": "github/nhejazi/haldensify", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/haldensify", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/haldensify"}, {"uid": "github/nhejazi/medoutcon", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/medoutcon", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/medoutcon"}, {"uid": "github/nhejazi/txshift", "html_url": "https://rseng.github.io/software/repository/github/nhejazi/txshift", "api_url": "https://rseng.github.io/software/api/repos/github/nhejazi/txshift"}, {"uid": "github/anmolter/XLUR", "html_url": "https://rseng.github.io/software/repository/github/anmolter/XLUR", "api_url": "https://rseng.github.io/software/api/repos/github/anmolter/XLUR"}, {"uid": "github/UU-ER/AdOpT-NET0", "html_url": "https://rseng.github.io/software/repository/github/UU-ER/AdOpT-NET0", "api_url": "https://rseng.github.io/software/api/repos/github/UU-ER/AdOpT-NET0"}, {"uid": "github/andresGranadosC/GalRotpy", "html_url": "https://rseng.github.io/software/repository/github/andresGranadosC/GalRotpy", "api_url": "https://rseng.github.io/software/api/repos/github/andresGranadosC/GalRotpy"}, {"uid": "github/damocles-code/damocles", "html_url": "https://rseng.github.io/software/repository/github/damocles-code/damocles", "api_url": "https://rseng.github.io/software/api/repos/github/damocles-code/damocles"}, {"uid": "github/python-hydro/pyro2", "html_url": "https://rseng.github.io/software/repository/github/python-hydro/pyro2", "api_url": "https://rseng.github.io/software/api/repos/github/python-hydro/pyro2"}, {"uid": "github/EhsanGharibNezhad/TelescopeML", "html_url": "https://rseng.github.io/software/repository/github/EhsanGharibNezhad/TelescopeML", "api_url": "https://rseng.github.io/software/api/repos/github/EhsanGharibNezhad/TelescopeML"}, {"uid": "github/Simthembile/cosmo-pipeline", "html_url": "https://rseng.github.io/software/repository/github/Simthembile/cosmo-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/Simthembile/cosmo-pipeline"}, {"uid": "github/helonghuangastro/exolyn", "html_url": "https://rseng.github.io/software/repository/github/helonghuangastro/exolyn", "api_url": "https://rseng.github.io/software/api/repos/github/helonghuangastro/exolyn"}, {"uid": "github/julia-wrobel/registr", "html_url": "https://rseng.github.io/software/repository/github/julia-wrobel/registr", "api_url": "https://rseng.github.io/software/api/repos/github/julia-wrobel/registr"}, {"uid": "github/tomasplsek/CADET", "html_url": "https://rseng.github.io/software/repository/github/tomasplsek/CADET", "api_url": "https://rseng.github.io/software/api/repos/github/tomasplsek/CADET"}, {"uid": "github/MannLabs/alphapept", "html_url": "https://rseng.github.io/software/repository/github/MannLabs/alphapept", "api_url": "https://rseng.github.io/software/api/repos/github/MannLabs/alphapept"}, {"uid": "github/MikeHeiber/Excimontec", "html_url": "https://rseng.github.io/software/repository/github/MikeHeiber/Excimontec", "api_url": "https://rseng.github.io/software/api/repos/github/MikeHeiber/Excimontec"}, {"uid": "github/CDCgov/BART-Survival", "html_url": "https://rseng.github.io/software/repository/github/CDCgov/BART-Survival", "api_url": "https://rseng.github.io/software/api/repos/github/CDCgov/BART-Survival"}, {"uid": "github/google/caliban", "html_url": "https://rseng.github.io/software/repository/github/google/caliban", "api_url": "https://rseng.github.io/software/api/repos/github/google/caliban"}, {"uid": "github/google/jax", "html_url": "https://rseng.github.io/software/repository/github/google/jax", "api_url": "https://rseng.github.io/software/api/repos/github/google/jax"}, {"uid": "github/google/best", "html_url": "https://rseng.github.io/software/repository/github/google/best", "api_url": "https://rseng.github.io/software/api/repos/github/google/best"}, {"uid": "github/google/flax", "html_url": "https://rseng.github.io/software/repository/github/google/flax", "api_url": "https://rseng.github.io/software/api/repos/github/google/flax"}, {"uid": "github/Vini2/GraphBin", "html_url": "https://rseng.github.io/software/repository/github/Vini2/GraphBin", "api_url": "https://rseng.github.io/software/api/repos/github/Vini2/GraphBin"}, {"uid": "github/buschlab/fhirspark", "html_url": "https://rseng.github.io/software/repository/github/buschlab/fhirspark", "api_url": "https://rseng.github.io/software/api/repos/github/buschlab/fhirspark"}, {"uid": "github/liushang17/AEnet", "html_url": "https://rseng.github.io/software/repository/github/liushang17/AEnet", "api_url": "https://rseng.github.io/software/api/repos/github/liushang17/AEnet"}, {"uid": "github/pmaxted/pycheops", "html_url": "https://rseng.github.io/software/repository/github/pmaxted/pycheops", "api_url": "https://rseng.github.io/software/api/repos/github/pmaxted/pycheops"}, {"uid": "github/pymatting/pymatting", "html_url": "https://rseng.github.io/software/repository/github/pymatting/pymatting", "api_url": "https://rseng.github.io/software/api/repos/github/pymatting/pymatting"}, {"uid": "github/NRDD-constraints/NRDD", "html_url": "https://rseng.github.io/software/repository/github/NRDD-constraints/NRDD", "api_url": "https://rseng.github.io/software/api/repos/github/NRDD-constraints/NRDD"}, {"uid": "github/justincfeng/PoMiN", "html_url": "https://rseng.github.io/software/repository/github/justincfeng/PoMiN", "api_url": "https://rseng.github.io/software/api/repos/github/justincfeng/PoMiN"}, {"uid": "github/varlociraptor/varlociraptorhub.io", "html_url": "https://rseng.github.io/software/repository/github/varlociraptor/varlociraptorhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/varlociraptor/varlociraptorhub.io"}, {"uid": "github/metawards/MetaWards", "html_url": "https://rseng.github.io/software/repository/github/metawards/MetaWards", "api_url": "https://rseng.github.io/software/api/repos/github/metawards/MetaWards"}, {"uid": "github/cire-thk/BifacialSimu", "html_url": "https://rseng.github.io/software/repository/github/cire-thk/BifacialSimu", "api_url": "https://rseng.github.io/software/api/repos/github/cire-thk/BifacialSimu"}, {"uid": "github/RuiningZHAO/wcpy", "html_url": "https://rseng.github.io/software/repository/github/RuiningZHAO/wcpy", "api_url": "https://rseng.github.io/software/api/repos/github/RuiningZHAO/wcpy"}, {"uid": "github/pratheesh3780/grapesAgri1", "html_url": "https://rseng.github.io/software/repository/github/pratheesh3780/grapesAgri1", "api_url": "https://rseng.github.io/software/api/repos/github/pratheesh3780/grapesAgri1"}, {"uid": "github/aarondotter/iso", "html_url": "https://rseng.github.io/software/repository/github/aarondotter/iso", "api_url": "https://rseng.github.io/software/api/repos/github/aarondotter/iso"}, {"uid": "github/CosmoStatGW/DarkSirensStat", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/DarkSirensStat", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/DarkSirensStat"}, {"uid": "github/CosmoStatGW/gwfast", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/gwfast", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/gwfast"}, {"uid": "github/CosmoStatGW/MGCosmoPop", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/MGCosmoPop", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/MGCosmoPop"}, {"uid": "github/CosmoStatGW/WF4Py", "html_url": "https://rseng.github.io/software/repository/github/CosmoStatGW/WF4Py", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStatGW/WF4Py"}, {"uid": "github/Guo-Jian-Wang/colfi", "html_url": "https://rseng.github.io/software/repository/github/Guo-Jian-Wang/colfi", "api_url": "https://rseng.github.io/software/api/repos/github/Guo-Jian-Wang/colfi"}, {"uid": "github/isovic/graphmap", "html_url": "https://rseng.github.io/software/repository/github/isovic/graphmap", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/graphmap"}, {"uid": "github/isovic/racon", "html_url": "https://rseng.github.io/software/repository/github/isovic/racon", "api_url": "https://rseng.github.io/software/api/repos/github/isovic/racon"}, {"uid": "github/flyaflya/causact", "html_url": "https://rseng.github.io/software/repository/github/flyaflya/causact", "api_url": "https://rseng.github.io/software/api/repos/github/flyaflya/causact"}, {"uid": "github/bolverk/huji-rich", "html_url": "https://rseng.github.io/software/repository/github/bolverk/huji-rich", "api_url": "https://rseng.github.io/software/api/repos/github/bolverk/huji-rich"}, {"uid": "github/ianfhunter/GNOLL", "html_url": "https://rseng.github.io/software/repository/github/ianfhunter/GNOLL", "api_url": "https://rseng.github.io/software/api/repos/github/ianfhunter/GNOLL"}, {"uid": "github/skovaka/UNCALLED", "html_url": "https://rseng.github.io/software/repository/github/skovaka/UNCALLED", "api_url": "https://rseng.github.io/software/api/repos/github/skovaka/UNCALLED"}, {"uid": "github/subhk/BiGSTARS.jl", "html_url": "https://rseng.github.io/software/repository/github/subhk/BiGSTARS.jl", "api_url": "https://rseng.github.io/software/api/repos/github/subhk/BiGSTARS.jl"}, {"uid": "github/pyro-ppl/pyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/pyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/pyro"}, {"uid": "github/pyro-ppl/numpyro", "html_url": "https://rseng.github.io/software/repository/github/pyro-ppl/numpyro", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-ppl/numpyro"}, {"uid": "github/OxES/k2sc", "html_url": "https://rseng.github.io/software/repository/github/OxES/k2sc", "api_url": "https://rseng.github.io/software/api/repos/github/OxES/k2sc"}, {"uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", "html_url": "https://rseng.github.io/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", "api_url": "https://rseng.github.io/software/api/repos/github/Julian-Sommer/chen-dai-2025-lightcurve-model"}, {"uid": "github/bionlplab/GlaucomaNet", "html_url": "https://rseng.github.io/software/repository/github/bionlplab/GlaucomaNet", "api_url": "https://rseng.github.io/software/api/repos/github/bionlplab/GlaucomaNet"}, {"uid": "github/DrSoulain/PREVIS", "html_url": "https://rseng.github.io/software/repository/github/DrSoulain/PREVIS", "api_url": "https://rseng.github.io/software/api/repos/github/DrSoulain/PREVIS"}, {"uid": "github/tne-lab/py-behav-box-v2", "html_url": "https://rseng.github.io/software/repository/github/tne-lab/py-behav-box-v2", "api_url": "https://rseng.github.io/software/api/repos/github/tne-lab/py-behav-box-v2"}, {"uid": "github/khowe/quick", "html_url": "https://rseng.github.io/software/repository/github/khowe/quick", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quick"}, {"uid": "github/khowe/quicktree", "html_url": "https://rseng.github.io/software/repository/github/khowe/quicktree", "api_url": "https://rseng.github.io/software/api/repos/github/khowe/quicktree"}, {"uid": "github/SteveMacenski/slam_toolbox", "html_url": "https://rseng.github.io/software/repository/github/SteveMacenski/slam_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/SteveMacenski/slam_toolbox"}, {"uid": "github/ScionResearch/genomesizeR", "html_url": "https://rseng.github.io/software/repository/github/ScionResearch/genomesizeR", "api_url": "https://rseng.github.io/software/api/repos/github/ScionResearch/genomesizeR"}, {"uid": "github/AndreNicolasChene/DRAGRACES", "html_url": "https://rseng.github.io/software/repository/github/AndreNicolasChene/DRAGRACES", "api_url": "https://rseng.github.io/software/api/repos/github/AndreNicolasChene/DRAGRACES"}, {"uid": "github/robertwissing/EOS", "html_url": "https://rseng.github.io/software/repository/github/robertwissing/EOS", "api_url": "https://rseng.github.io/software/api/repos/github/robertwissing/EOS"}, {"uid": "github/yatiml/yatiml", "html_url": "https://rseng.github.io/software/repository/github/yatiml/yatiml", "api_url": "https://rseng.github.io/software/api/repos/github/yatiml/yatiml"}, {"uid": "github/mathworks/Simscape-Medical-Ventilator", "html_url": "https://rseng.github.io/software/repository/github/mathworks/Simscape-Medical-Ventilator", "api_url": "https://rseng.github.io/software/api/repos/github/mathworks/Simscape-Medical-Ventilator"}, {"uid": "github/vimc/vaultr", "html_url": "https://rseng.github.io/software/repository/github/vimc/vaultr", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/vaultr"}, {"uid": "github/vimc/dettl", "html_url": "https://rseng.github.io/software/repository/github/vimc/dettl", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/dettl"}, {"uid": "github/vimc/orderly", "html_url": "https://rseng.github.io/software/repository/github/vimc/orderly", "api_url": "https://rseng.github.io/software/api/repos/github/vimc/orderly"}, {"uid": "github/AlexanderLabWHOI/EUKulele", "html_url": "https://rseng.github.io/software/repository/github/AlexanderLabWHOI/EUKulele", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderLabWHOI/EUKulele"}, {"uid": "github/CoastEgo/microlux", "html_url": "https://rseng.github.io/software/repository/github/CoastEgo/microlux", "api_url": "https://rseng.github.io/software/api/repos/github/CoastEgo/microlux"}, {"uid": "github/nekStab/LightKrylov", "html_url": "https://rseng.github.io/software/repository/github/nekStab/LightKrylov", "api_url": "https://rseng.github.io/software/api/repos/github/nekStab/LightKrylov"}, {"uid": "github/wouterpeere/GHEtool", "html_url": "https://rseng.github.io/software/repository/github/wouterpeere/GHEtool", "api_url": "https://rseng.github.io/software/api/repos/github/wouterpeere/GHEtool"}, {"uid": "github/rajeshrinet/pystokes", "html_url": "https://rseng.github.io/software/repository/github/rajeshrinet/pystokes", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshrinet/pystokes"}, {"uid": "github/erikhom/aida", "html_url": "https://rseng.github.io/software/repository/github/erikhom/aida", "api_url": "https://rseng.github.io/software/api/repos/github/erikhom/aida"}, {"uid": "github/thorstone25/qups", "html_url": "https://rseng.github.io/software/repository/github/thorstone25/qups", "api_url": "https://rseng.github.io/software/api/repos/github/thorstone25/qups"}, {"uid": "github/byuflowlab/GXBeam.jl", "html_url": "https://rseng.github.io/software/repository/github/byuflowlab/GXBeam.jl", "api_url": "https://rseng.github.io/software/api/repos/github/byuflowlab/GXBeam.jl"}, {"uid": "github/FluidityProject/fluidity", "html_url": "https://rseng.github.io/software/repository/github/FluidityProject/fluidity", "api_url": "https://rseng.github.io/software/api/repos/github/FluidityProject/fluidity"}, {"uid": "github/garrelt/C2-Ray3Dm1D_Helium", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray3Dm1D_Helium"}, {"uid": "github/garrelt/C2-Ray1D", "html_url": "https://rseng.github.io/software/repository/github/garrelt/C2-Ray1D", "api_url": "https://rseng.github.io/software/api/repos/github/garrelt/C2-Ray1D"}, {"uid": "github/FrederickHuangLin/ANCOMBC", "html_url": "https://rseng.github.io/software/repository/github/FrederickHuangLin/ANCOMBC", "api_url": "https://rseng.github.io/software/api/repos/github/FrederickHuangLin/ANCOMBC"}, {"uid": "github/brocklab/pycashier", "html_url": "https://rseng.github.io/software/repository/github/brocklab/pycashier", "api_url": "https://rseng.github.io/software/api/repos/github/brocklab/pycashier"}, {"uid": "github/rhernandvel/ViromeXplore", "html_url": "https://rseng.github.io/software/repository/github/rhernandvel/ViromeXplore", "api_url": "https://rseng.github.io/software/api/repos/github/rhernandvel/ViromeXplore"}, {"uid": "github/vsbuffalo/scythe", "html_url": "https://rseng.github.io/software/repository/github/vsbuffalo/scythe", "api_url": "https://rseng.github.io/software/api/repos/github/vsbuffalo/scythe"}, {"uid": "github/perfanalytics/pose2sim", "html_url": "https://rseng.github.io/software/repository/github/perfanalytics/pose2sim", "api_url": "https://rseng.github.io/software/api/repos/github/perfanalytics/pose2sim"}, {"uid": "github/ProfessorBrunner/rc3-pipeline", "html_url": "https://rseng.github.io/software/repository/github/ProfessorBrunner/rc3-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/ProfessorBrunner/rc3-pipeline"}, {"uid": "github/carlosandrepaes/GaPP", "html_url": "https://rseng.github.io/software/repository/github/carlosandrepaes/GaPP", "api_url": "https://rseng.github.io/software/api/repos/github/carlosandrepaes/GaPP"}, {"uid": "github/wf4ever/astrotaverna", "html_url": "https://rseng.github.io/software/repository/github/wf4ever/astrotaverna", "api_url": "https://rseng.github.io/software/api/repos/github/wf4ever/astrotaverna"}, {"uid": "github/Pranab-JD/LeXInt", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/LeXInt", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/LeXInt"}, {"uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "html_url": "https://rseng.github.io/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", "api_url": "https://rseng.github.io/software/api/repos/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE"}, {"uid": "github/tamarervin/SolAster", "html_url": "https://rseng.github.io/software/repository/github/tamarervin/SolAster", "api_url": "https://rseng.github.io/software/api/repos/github/tamarervin/SolAster"}, {"uid": "github/kathlandgren/SWAMPE", "html_url": "https://rseng.github.io/software/repository/github/kathlandgren/SWAMPE", "api_url": "https://rseng.github.io/software/api/repos/github/kathlandgren/SWAMPE"}, {"uid": "github/pr2database/pr2-primers", "html_url": "https://rseng.github.io/software/repository/github/pr2database/pr2-primers", "api_url": "https://rseng.github.io/software/api/repos/github/pr2database/pr2-primers"}, {"uid": "github/jvc2688/K2-CPM", "html_url": "https://rseng.github.io/software/repository/github/jvc2688/K2-CPM", "api_url": "https://rseng.github.io/software/api/repos/github/jvc2688/K2-CPM"}, {"uid": "github/vprusso/toqito", "html_url": "https://rseng.github.io/software/repository/github/vprusso/toqito", "api_url": "https://rseng.github.io/software/api/repos/github/vprusso/toqito"}, {"uid": "github/edgardomortiz/Captus", "html_url": "https://rseng.github.io/software/repository/github/edgardomortiz/Captus", "api_url": "https://rseng.github.io/software/api/repos/github/edgardomortiz/Captus"}, {"uid": "github/mongibellili/QuantizedSystemSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/mongibellili/QuantizedSystemSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mongibellili/QuantizedSystemSolver.jl"}, {"uid": "github/FrancesBW/bellamy", "html_url": "https://rseng.github.io/software/repository/github/FrancesBW/bellamy", "api_url": "https://rseng.github.io/software/api/repos/github/FrancesBW/bellamy"}, {"uid": "github/bmorris3/aesop", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/aesop", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/aesop"}, {"uid": "github/bmorris3/fleck", "html_url": "https://rseng.github.io/software/repository/github/bmorris3/fleck", "api_url": "https://rseng.github.io/software/api/repos/github/bmorris3/fleck"}, {"uid": "github/Bioinformatics-Munich/scas_dashboard", "html_url": "https://rseng.github.io/software/repository/github/Bioinformatics-Munich/scas_dashboard", "api_url": "https://rseng.github.io/software/api/repos/github/Bioinformatics-Munich/scas_dashboard"}, {"uid": "github/MichielCottaar/velbin", "html_url": "https://rseng.github.io/software/repository/github/MichielCottaar/velbin", "api_url": "https://rseng.github.io/software/api/repos/github/MichielCottaar/velbin"}, {"uid": "github/gerthmicha/wolbachia-mlst", "html_url": "https://rseng.github.io/software/repository/github/gerthmicha/wolbachia-mlst", "api_url": "https://rseng.github.io/software/api/repos/github/gerthmicha/wolbachia-mlst"}, {"uid": "github/herjy/SLIT", "html_url": "https://rseng.github.io/software/repository/github/herjy/SLIT", "api_url": "https://rseng.github.io/software/api/repos/github/herjy/SLIT"}, {"uid": "github/mishioo/tesliper", "html_url": "https://rseng.github.io/software/repository/github/mishioo/tesliper", "api_url": "https://rseng.github.io/software/api/repos/github/mishioo/tesliper"}, {"uid": "github/RoelofBerg/limereg", "html_url": "https://rseng.github.io/software/repository/github/RoelofBerg/limereg", "api_url": "https://rseng.github.io/software/api/repos/github/RoelofBerg/limereg"}, {"uid": "github/gabo-di/AquaCrop.jl", "html_url": "https://rseng.github.io/software/repository/github/gabo-di/AquaCrop.jl", "api_url": "https://rseng.github.io/software/api/repos/github/gabo-di/AquaCrop.jl"}, {"uid": "github/EESI/Complet-Plus", "html_url": "https://rseng.github.io/software/repository/github/EESI/Complet-Plus", "api_url": "https://rseng.github.io/software/api/repos/github/EESI/Complet-Plus"}, {"uid": "github/meta-logic/sequoia", "html_url": "https://rseng.github.io/software/repository/github/meta-logic/sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/meta-logic/sequoia"}, {"uid": "github/zhanghe9704/tpsa", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa"}, {"uid": "github/zhanghe9704/tpsa_sym", "html_url": "https://rseng.github.io/software/repository/github/zhanghe9704/tpsa_sym", "api_url": "https://rseng.github.io/software/api/repos/github/zhanghe9704/tpsa_sym"}, {"uid": "github/sbmlteam/moccasin", "html_url": "https://rseng.github.io/software/repository/github/sbmlteam/moccasin", "api_url": "https://rseng.github.io/software/api/repos/github/sbmlteam/moccasin"}, {"uid": "github/ADThomas-astro/oxaf", "html_url": "https://rseng.github.io/software/repository/github/ADThomas-astro/oxaf", "api_url": "https://rseng.github.io/software/api/repos/github/ADThomas-astro/oxaf"}, {"uid": "github/wiki/Install-macs2", "html_url": "https://rseng.github.io/software/repository/github/wiki/Install-macs2", "api_url": "https://rseng.github.io/software/api/repos/github/wiki/Install-macs2"}, {"uid": "github/lberaldoesilva/naif", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/naif", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/naif"}, {"uid": "github/lberaldoesilva/tropygal", "html_url": "https://rseng.github.io/software/repository/github/lberaldoesilva/tropygal", "api_url": "https://rseng.github.io/software/api/repos/github/lberaldoesilva/tropygal"}, {"uid": "github/sethspjohnso/satmc", "html_url": "https://rseng.github.io/software/repository/github/sethspjohnso/satmc", "api_url": "https://rseng.github.io/software/api/repos/github/sethspjohnso/satmc"}, {"uid": "github/IBMTRostock/GIFT", "html_url": "https://rseng.github.io/software/repository/github/IBMTRostock/GIFT", "api_url": "https://rseng.github.io/software/api/repos/github/IBMTRostock/GIFT"}, {"uid": "github/Jieyu126/Jitter", "html_url": "https://rseng.github.io/software/repository/github/Jieyu126/Jitter", "api_url": "https://rseng.github.io/software/api/repos/github/Jieyu126/Jitter"}, {"uid": "github/BioinfoUNIBA/REDItools2", "html_url": "https://rseng.github.io/software/repository/github/BioinfoUNIBA/REDItools2", "api_url": "https://rseng.github.io/software/api/repos/github/BioinfoUNIBA/REDItools2"}, {"uid": "github/zd1/telseq", "html_url": "https://rseng.github.io/software/repository/github/zd1/telseq", "api_url": "https://rseng.github.io/software/api/repos/github/zd1/telseq"}, {"uid": "github/CNuge/BOLD-CLI", "html_url": "https://rseng.github.io/software/repository/github/CNuge/BOLD-CLI", "api_url": "https://rseng.github.io/software/api/repos/github/CNuge/BOLD-CLI"}, {"uid": "github/dfm/photodynam", "html_url": "https://rseng.github.io/software/repository/github/dfm/photodynam", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/photodynam"}, {"uid": "github/dfm/ketu", "html_url": "https://rseng.github.io/software/repository/github/dfm/ketu", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/ketu"}, {"uid": "github/dfm/exopop", "html_url": "https://rseng.github.io/software/repository/github/dfm/exopop", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/exopop"}, {"uid": "github/dfm/celerite", "html_url": "https://rseng.github.io/software/repository/github/dfm/celerite", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/celerite"}, {"uid": "github/dfm/corner.py", "html_url": "https://rseng.github.io/software/repository/github/dfm/corner.py", "api_url": "https://rseng.github.io/software/api/repos/github/dfm/corner.py"}, {"uid": "github/ocean-eddy-cpt/gcm-filters", "html_url": "https://rseng.github.io/software/repository/github/ocean-eddy-cpt/gcm-filters", "api_url": "https://rseng.github.io/software/api/repos/github/ocean-eddy-cpt/gcm-filters"}, {"uid": "github/samuelmurail/af_analysis", "html_url": "https://rseng.github.io/software/repository/github/samuelmurail/af_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/samuelmurail/af_analysis"}, {"uid": "github/quinlanW/dbMisLoc", "html_url": "https://rseng.github.io/software/repository/github/quinlanW/dbMisLoc", "api_url": "https://rseng.github.io/software/api/repos/github/quinlanW/dbMisLoc"}, {"uid": "github/s2mLab/pyScienceMode", "html_url": "https://rseng.github.io/software/repository/github/s2mLab/pyScienceMode", "api_url": "https://rseng.github.io/software/api/repos/github/s2mLab/pyScienceMode"}, {"uid": "github/meantrix/corrp", "html_url": "https://rseng.github.io/software/repository/github/meantrix/corrp", "api_url": "https://rseng.github.io/software/api/repos/github/meantrix/corrp"}, {"uid": "github/nand1155/CausNet", "html_url": "https://rseng.github.io/software/repository/github/nand1155/CausNet", "api_url": "https://rseng.github.io/software/api/repos/github/nand1155/CausNet"}, {"uid": "github/bxskdh/TSTA", "html_url": "https://rseng.github.io/software/repository/github/bxskdh/TSTA", "api_url": "https://rseng.github.io/software/api/repos/github/bxskdh/TSTA"}, {"uid": "github/AlgoLab/shark", "html_url": "https://rseng.github.io/software/repository/github/AlgoLab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/AlgoLab/shark"}, {"uid": "github/inab/trimal", "html_url": "https://rseng.github.io/software/repository/github/inab/trimal", "api_url": "https://rseng.github.io/software/api/repos/github/inab/trimal"}, {"uid": "github/nextgenusfs/amptk", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/amptk", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/amptk"}, {"uid": "github/nextgenusfs/funannotate", "html_url": "https://rseng.github.io/software/repository/github/nextgenusfs/funannotate", "api_url": "https://rseng.github.io/software/api/repos/github/nextgenusfs/funannotate"}, {"uid": "github/atfrank/PyShifts", "html_url": "https://rseng.github.io/software/repository/github/atfrank/PyShifts", "api_url": "https://rseng.github.io/software/api/repos/github/atfrank/PyShifts"}, {"uid": "github/reproducible-biomedical-modeling/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/reproducible-biomedical-modeling/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/reproducible-biomedical-modeling/Biosimulations"}, {"uid": "github/PaulRitsche/DLTrack", "html_url": "https://rseng.github.io/software/repository/github/PaulRitsche/DLTrack", "api_url": "https://rseng.github.io/software/api/repos/github/PaulRitsche/DLTrack"}, {"uid": "github/YesselmanLab/rna_map", "html_url": "https://rseng.github.io/software/repository/github/YesselmanLab/rna_map", "api_url": "https://rseng.github.io/software/api/repos/github/YesselmanLab/rna_map"}, {"uid": "github/sebastian-zieba/PACMAN", "html_url": "https://rseng.github.io/software/repository/github/sebastian-zieba/PACMAN", "api_url": "https://rseng.github.io/software/api/repos/github/sebastian-zieba/PACMAN"}, {"uid": "github/vijayvarma392/binaryBHexp", "html_url": "https://rseng.github.io/software/repository/github/vijayvarma392/binaryBHexp", "api_url": "https://rseng.github.io/software/api/repos/github/vijayvarma392/binaryBHexp"}, {"uid": "github/baoxingsong/AnchorWave", "html_url": "https://rseng.github.io/software/repository/github/baoxingsong/AnchorWave", "api_url": "https://rseng.github.io/software/api/repos/github/baoxingsong/AnchorWave"}, {"uid": "github/jonas-fuchs/varVAMP", "html_url": "https://rseng.github.io/software/repository/github/jonas-fuchs/varVAMP", "api_url": "https://rseng.github.io/software/api/repos/github/jonas-fuchs/varVAMP"}, {"uid": "github/UK-Digital-Heart-Project/4Dsegment", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsegment", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsegment"}, {"uid": "github/UK-Digital-Heart-Project/4Dsurvival", "html_url": "https://rseng.github.io/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", "api_url": "https://rseng.github.io/software/api/repos/github/UK-Digital-Heart-Project/4Dsurvival"}, {"uid": "github/damcb/tyssue", "html_url": "https://rseng.github.io/software/repository/github/damcb/tyssue", "api_url": "https://rseng.github.io/software/api/repos/github/damcb/tyssue"}, {"uid": "github/kateharborne/SimSpin", "html_url": "https://rseng.github.io/software/repository/github/kateharborne/SimSpin", "api_url": "https://rseng.github.io/software/api/repos/github/kateharborne/SimSpin"}, {"uid": "github/lcpp-org/RustBCA", "html_url": "https://rseng.github.io/software/repository/github/lcpp-org/RustBCA", "api_url": "https://rseng.github.io/software/api/repos/github/lcpp-org/RustBCA"}, {"uid": "github/blankhaar/PORTAL", "html_url": "https://rseng.github.io/software/repository/github/blankhaar/PORTAL", "api_url": "https://rseng.github.io/software/api/repos/github/blankhaar/PORTAL"}, {"uid": "github/dfujim/bfit", "html_url": "https://rseng.github.io/software/repository/github/dfujim/bfit", "api_url": "https://rseng.github.io/software/api/repos/github/dfujim/bfit"}, {"uid": "github/jiwoncpark/baobab", "html_url": "https://rseng.github.io/software/repository/github/jiwoncpark/baobab", "api_url": "https://rseng.github.io/software/api/repos/github/jiwoncpark/baobab"}, {"uid": "github/mnets/pymnet", "html_url": "https://rseng.github.io/software/repository/github/mnets/pymnet", "api_url": "https://rseng.github.io/software/api/repos/github/mnets/pymnet"}, {"uid": "github/astro-otter/otter", "html_url": "https://rseng.github.io/software/repository/github/astro-otter/otter", "api_url": "https://rseng.github.io/software/api/repos/github/astro-otter/otter"}, {"uid": "github/sorenwacker/ProteomicsQC", "html_url": "https://rseng.github.io/software/repository/github/sorenwacker/ProteomicsQC", "api_url": "https://rseng.github.io/software/api/repos/github/sorenwacker/ProteomicsQC"}, {"uid": "github/artefactory/choice-learn", "html_url": "https://rseng.github.io/software/repository/github/artefactory/choice-learn", "api_url": "https://rseng.github.io/software/api/repos/github/artefactory/choice-learn"}, {"uid": "github/abs-tudelft/variant-calling-at-scale", "html_url": "https://rseng.github.io/software/repository/github/abs-tudelft/variant-calling-at-scale", "api_url": "https://rseng.github.io/software/api/repos/github/abs-tudelft/variant-calling-at-scale"}, {"uid": "github/creanero/locus", "html_url": "https://rseng.github.io/software/repository/github/creanero/locus", "api_url": "https://rseng.github.io/software/api/repos/github/creanero/locus"}, {"uid": "github/BioMeCIS-Lab/OpenOmics", "html_url": "https://rseng.github.io/software/repository/github/BioMeCIS-Lab/OpenOmics", "api_url": "https://rseng.github.io/software/api/repos/github/BioMeCIS-Lab/OpenOmics"}, {"uid": "github/rsnemmen/BCES", "html_url": "https://rseng.github.io/software/repository/github/rsnemmen/BCES", "api_url": "https://rseng.github.io/software/api/repos/github/rsnemmen/BCES"}, {"uid": "github/yiling0210/APIR", "html_url": "https://rseng.github.io/software/repository/github/yiling0210/APIR", "api_url": "https://rseng.github.io/software/api/repos/github/yiling0210/APIR"}, {"uid": "github/qiankunzizairen/PanGIA", "html_url": "https://rseng.github.io/software/repository/github/qiankunzizairen/PanGIA", "api_url": "https://rseng.github.io/software/api/repos/github/qiankunzizairen/PanGIA"}, {"uid": "github/kathrinnp/DarkRayNet", "html_url": "https://rseng.github.io/software/repository/github/kathrinnp/DarkRayNet", "api_url": "https://rseng.github.io/software/api/repos/github/kathrinnp/DarkRayNet"}, {"uid": "github/jonaspleyer/cellular_raza", "html_url": "https://rseng.github.io/software/repository/github/jonaspleyer/cellular_raza", "api_url": "https://rseng.github.io/software/api/repos/github/jonaspleyer/cellular_raza"}, {"uid": "github/amusecode/amuse", "html_url": "https://rseng.github.io/software/repository/github/amusecode/amuse", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/amuse"}, {"uid": "github/amusecode/TRES", "html_url": "https://rseng.github.io/software/repository/github/amusecode/TRES", "api_url": "https://rseng.github.io/software/api/repos/github/amusecode/TRES"}, {"uid": "github/E3SM-Project/gdess", "html_url": "https://rseng.github.io/software/repository/github/E3SM-Project/gdess", "api_url": "https://rseng.github.io/software/api/repos/github/E3SM-Project/gdess"}, {"uid": "github/dixonlab/hic_breakfinder", "html_url": "https://rseng.github.io/software/repository/github/dixonlab/hic_breakfinder", "api_url": "https://rseng.github.io/software/api/repos/github/dixonlab/hic_breakfinder"}, {"uid": "github/xpsi-group/neost", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/neost", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/neost"}, {"uid": "github/xpsi-group/xpsi", "html_url": "https://rseng.github.io/software/repository/github/xpsi-group/xpsi", "api_url": "https://rseng.github.io/software/api/repos/github/xpsi-group/xpsi"}, {"uid": "github/meerklass/MeerFish", "html_url": "https://rseng.github.io/software/repository/github/meerklass/MeerFish", "api_url": "https://rseng.github.io/software/api/repos/github/meerklass/MeerFish"}, {"uid": "github/BioMedIA/MIRTK", "html_url": "https://rseng.github.io/software/repository/github/BioMedIA/MIRTK", "api_url": "https://rseng.github.io/software/api/repos/github/BioMedIA/MIRTK"}, {"uid": "github/eliotayache/GAMMA", "html_url": "https://rseng.github.io/software/repository/github/eliotayache/GAMMA", "api_url": "https://rseng.github.io/software/api/repos/github/eliotayache/GAMMA"}, {"uid": "github/jcombs1/blasr", "html_url": "https://rseng.github.io/software/repository/github/jcombs1/blasr", "api_url": "https://rseng.github.io/software/api/repos/github/jcombs1/blasr"}, {"uid": "github/iric-soft/km", "html_url": "https://rseng.github.io/software/repository/github/iric-soft/km", "api_url": "https://rseng.github.io/software/api/repos/github/iric-soft/km"}, {"uid": "github/rhenanbartels/hrv", "html_url": "https://rseng.github.io/software/repository/github/rhenanbartels/hrv", "api_url": "https://rseng.github.io/software/api/repos/github/rhenanbartels/hrv"}, {"uid": "github/Juke34/AliNe", "html_url": "https://rseng.github.io/software/repository/github/Juke34/AliNe", "api_url": "https://rseng.github.io/software/api/repos/github/Juke34/AliNe"}, {"uid": "github/gerlero/foamlib", "html_url": "https://rseng.github.io/software/repository/github/gerlero/foamlib", "api_url": "https://rseng.github.io/software/api/repos/github/gerlero/foamlib"}, {"uid": "github/leigh2/cetra", "html_url": "https://rseng.github.io/software/repository/github/leigh2/cetra", "api_url": "https://rseng.github.io/software/api/repos/github/leigh2/cetra"}, {"uid": "github/astroml/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroml/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroml/gatspy"}, {"uid": "github/enveda/RPath", "html_url": "https://rseng.github.io/software/repository/github/enveda/RPath", "api_url": "https://rseng.github.io/software/api/repos/github/enveda/RPath"}, {"uid": "github/cullanhowlett/l-picola", "html_url": "https://rseng.github.io/software/repository/github/cullanhowlett/l-picola", "api_url": "https://rseng.github.io/software/api/repos/github/cullanhowlett/l-picola"}, {"uid": "github/MartianColonist/Cthulhu", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/Cthulhu", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/Cthulhu"}, {"uid": "github/MartianColonist/POSEIDON", "html_url": "https://rseng.github.io/software/repository/github/MartianColonist/POSEIDON", "api_url": "https://rseng.github.io/software/api/repos/github/MartianColonist/POSEIDON"}, {"uid": "github/GermanHeim/globalsearch-rs", "html_url": "https://rseng.github.io/software/repository/github/GermanHeim/globalsearch-rs", "api_url": "https://rseng.github.io/software/api/repos/github/GermanHeim/globalsearch-rs"}, {"uid": "github/arjunsavel/cortecs", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/cortecs", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/cortecs"}, {"uid": "github/arjunsavel/SImMER", "html_url": "https://rseng.github.io/software/repository/github/arjunsavel/SImMER", "api_url": "https://rseng.github.io/software/api/repos/github/arjunsavel/SImMER"}, {"uid": "github/Yida-Lin/libxdf", "html_url": "https://rseng.github.io/software/repository/github/Yida-Lin/libxdf", "api_url": "https://rseng.github.io/software/api/repos/github/Yida-Lin/libxdf"}, {"uid": "github/wjakethompson/measr", "html_url": "https://rseng.github.io/software/repository/github/wjakethompson/measr", "api_url": "https://rseng.github.io/software/api/repos/github/wjakethompson/measr"}, {"uid": "github/kylemede/ExoSOFT", "html_url": "https://rseng.github.io/software/repository/github/kylemede/ExoSOFT", "api_url": "https://rseng.github.io/software/api/repos/github/kylemede/ExoSOFT"}, {"uid": "github/lllangWV/ParquetDB", "html_url": "https://rseng.github.io/software/repository/github/lllangWV/ParquetDB", "api_url": "https://rseng.github.io/software/api/repos/github/lllangWV/ParquetDB"}, {"uid": "github/Aravind-Sundararajan/MocoExtendProblem", "html_url": "https://rseng.github.io/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", "api_url": "https://rseng.github.io/software/api/repos/github/Aravind-Sundararajan/MocoExtendProblem"}, {"uid": "github/cython/cython", "html_url": "https://rseng.github.io/software/repository/github/cython/cython", "api_url": "https://rseng.github.io/software/api/repos/github/cython/cython"}, {"uid": "github/AstroVPK/kali", "html_url": "https://rseng.github.io/software/repository/github/AstroVPK/kali", "api_url": "https://rseng.github.io/software/api/repos/github/AstroVPK/kali"}, {"uid": "github/Effective-Quadratures/Effective-Quadratures", "html_url": "https://rseng.github.io/software/repository/github/Effective-Quadratures/Effective-Quadratures", "api_url": "https://rseng.github.io/software/api/repos/github/Effective-Quadratures/Effective-Quadratures"}, {"uid": "github/nanograv/PINT", "html_url": "https://rseng.github.io/software/repository/github/nanograv/PINT", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/PINT"}, {"uid": "github/nanograv/enterprise", "html_url": "https://rseng.github.io/software/repository/github/nanograv/enterprise", "api_url": "https://rseng.github.io/software/api/repos/github/nanograv/enterprise"}, {"uid": "github/HengyueZ/astrofix", "html_url": "https://rseng.github.io/software/repository/github/HengyueZ/astrofix", "api_url": "https://rseng.github.io/software/api/repos/github/HengyueZ/astrofix"}, {"uid": "github/complextissue/pytximport", "html_url": "https://rseng.github.io/software/repository/github/complextissue/pytximport", "api_url": "https://rseng.github.io/software/api/repos/github/complextissue/pytximport"}, {"uid": "github/gilestrolab/ethoscope", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/ethoscope", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/ethoscope"}, {"uid": "github/gilestrolab/pySolo", "html_url": "https://rseng.github.io/software/repository/github/gilestrolab/pySolo", "api_url": "https://rseng.github.io/software/api/repos/github/gilestrolab/pySolo"}, {"uid": "github/xragua/xraybinaryorbit", "html_url": "https://rseng.github.io/software/repository/github/xragua/xraybinaryorbit", "api_url": "https://rseng.github.io/software/api/repos/github/xragua/xraybinaryorbit"}, {"uid": "github/fluhus/blini", "html_url": "https://rseng.github.io/software/repository/github/fluhus/blini", "api_url": "https://rseng.github.io/software/api/repos/github/fluhus/blini"}, {"uid": "github/BoPeng/simuPOP", "html_url": "https://rseng.github.io/software/repository/github/BoPeng/simuPOP", "api_url": "https://rseng.github.io/software/api/repos/github/BoPeng/simuPOP"}, {"uid": "github/PyTables/PyTables", "html_url": "https://rseng.github.io/software/repository/github/PyTables/PyTables", "api_url": "https://rseng.github.io/software/api/repos/github/PyTables/PyTables"}, {"uid": "github/AndresRTejedor/Mold", "html_url": "https://rseng.github.io/software/repository/github/AndresRTejedor/Mold", "api_url": "https://rseng.github.io/software/api/repos/github/AndresRTejedor/Mold"}, {"uid": "github/silburt/DeepMoon", "html_url": "https://rseng.github.io/software/repository/github/silburt/DeepMoon", "api_url": "https://rseng.github.io/software/api/repos/github/silburt/DeepMoon"}, {"uid": "github/imr-framework/OCTOPUS", "html_url": "https://rseng.github.io/software/repository/github/imr-framework/OCTOPUS", "api_url": "https://rseng.github.io/software/api/repos/github/imr-framework/OCTOPUS"}, {"uid": "github/dgarrimar/sqtlseeker2-nf", "html_url": "https://rseng.github.io/software/repository/github/dgarrimar/sqtlseeker2-nf", "api_url": "https://rseng.github.io/software/api/repos/github/dgarrimar/sqtlseeker2-nf"}, {"uid": "github/hyosubkim/bayes-toolbox", "html_url": "https://rseng.github.io/software/repository/github/hyosubkim/bayes-toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/hyosubkim/bayes-toolbox"}, {"uid": "github/haiyang1986/TVAR", "html_url": "https://rseng.github.io/software/repository/github/haiyang1986/TVAR", "api_url": "https://rseng.github.io/software/api/repos/github/haiyang1986/TVAR"}, {"uid": "github/LiShuTJ/NDNet", "html_url": "https://rseng.github.io/software/repository/github/LiShuTJ/NDNet", "api_url": "https://rseng.github.io/software/api/repos/github/LiShuTJ/NDNet"}, {"uid": "github/AarhusCosmology/connect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/connect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/connect_public"}, {"uid": "github/AarhusCosmology/prospect_public", "html_url": "https://rseng.github.io/software/repository/github/AarhusCosmology/prospect_public", "api_url": "https://rseng.github.io/software/api/repos/github/AarhusCosmology/prospect_public"}, {"uid": "github/BartoszBartmanski/StoSpa2", "html_url": "https://rseng.github.io/software/repository/github/BartoszBartmanski/StoSpa2", "api_url": "https://rseng.github.io/software/api/repos/github/BartoszBartmanski/StoSpa2"}, {"uid": "github/davidechicco/geneExpressionFromGEO", "html_url": "https://rseng.github.io/software/repository/github/davidechicco/geneExpressionFromGEO", "api_url": "https://rseng.github.io/software/api/repos/github/davidechicco/geneExpressionFromGEO"}, {"uid": "github/UncertainLab/Enlsip.jl", "html_url": "https://rseng.github.io/software/repository/github/UncertainLab/Enlsip.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UncertainLab/Enlsip.jl"}, {"uid": "github/CDSP-SCPO/metadata-middleware", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/metadata-middleware", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/metadata-middleware"}, {"uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/WPSS-for-ESS-webpanel"}, {"uid": "github/CDSP-SCPO/dataverse-feed", "html_url": "https://rseng.github.io/software/repository/github/CDSP-SCPO/dataverse-feed", "api_url": "https://rseng.github.io/software/api/repos/github/CDSP-SCPO/dataverse-feed"}, {"uid": "github/Eventdisplay/Eventdisplay", "html_url": "https://rseng.github.io/software/repository/github/Eventdisplay/Eventdisplay", "api_url": "https://rseng.github.io/software/api/repos/github/Eventdisplay/Eventdisplay"}, {"uid": "github/s-goldman/Dusty-Evolved-Star-Kit", "html_url": "https://rseng.github.io/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", "api_url": "https://rseng.github.io/software/api/repos/github/s-goldman/Dusty-Evolved-Star-Kit"}, {"uid": "github/ixakalabadie/ViSL3D", "html_url": "https://rseng.github.io/software/repository/github/ixakalabadie/ViSL3D", "api_url": "https://rseng.github.io/software/api/repos/github/ixakalabadie/ViSL3D"}, {"uid": "github/NERDSITU/superblockify", "html_url": "https://rseng.github.io/software/repository/github/NERDSITU/superblockify", "api_url": "https://rseng.github.io/software/api/repos/github/NERDSITU/superblockify"}, {"uid": "github/aksholokhov/pysr3", "html_url": "https://rseng.github.io/software/repository/github/aksholokhov/pysr3", "api_url": "https://rseng.github.io/software/api/repos/github/aksholokhov/pysr3"}, {"uid": "github/cma2015/iwa-miRNA", "html_url": "https://rseng.github.io/software/repository/github/cma2015/iwa-miRNA", "api_url": "https://rseng.github.io/software/api/repos/github/cma2015/iwa-miRNA"}, {"uid": "github/elizakempton/Exo_Transmit", "html_url": "https://rseng.github.io/software/repository/github/elizakempton/Exo_Transmit", "api_url": "https://rseng.github.io/software/api/repos/github/elizakempton/Exo_Transmit"}, {"uid": "github/mariakotouza/TRIP-Tool", "html_url": "https://rseng.github.io/software/repository/github/mariakotouza/TRIP-Tool", "api_url": "https://rseng.github.io/software/api/repos/github/mariakotouza/TRIP-Tool"}, {"uid": "github/CEA-MetroCarac/pystack3d", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/pystack3d", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/pystack3d"}, {"uid": "github/CEA-MetroCarac/fitspy", "html_url": "https://rseng.github.io/software/repository/github/CEA-MetroCarac/fitspy", "api_url": "https://rseng.github.io/software/api/repos/github/CEA-MetroCarac/fitspy"}, {"uid": "github/pni-lab/mlconfound", "html_url": "https://rseng.github.io/software/repository/github/pni-lab/mlconfound", "api_url": "https://rseng.github.io/software/api/repos/github/pni-lab/mlconfound"}, {"uid": "github/aprsa/ebai", "html_url": "https://rseng.github.io/software/repository/github/aprsa/ebai", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/ebai"}, {"uid": "github/aprsa/dips", "html_url": "https://rseng.github.io/software/repository/github/aprsa/dips", "api_url": "https://rseng.github.io/software/api/repos/github/aprsa/dips"}, {"uid": "github/neslusan/BELTCROSS2", "html_url": "https://rseng.github.io/software/repository/github/neslusan/BELTCROSS2", "api_url": "https://rseng.github.io/software/api/repos/github/neslusan/BELTCROSS2"}, {"uid": "github/ntveem/sterile-dm", "html_url": "https://rseng.github.io/software/repository/github/ntveem/sterile-dm", "api_url": "https://rseng.github.io/software/api/repos/github/ntveem/sterile-dm"}, {"uid": "github/astrobrent/itera", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/itera", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/itera"}, {"uid": "github/astrobrent/mappings", "html_url": "https://rseng.github.io/software/repository/github/astrobrent/mappings", "api_url": "https://rseng.github.io/software/api/repos/github/astrobrent/mappings"}, {"uid": "github/radicamc/applesoss", "html_url": "https://rseng.github.io/software/repository/github/radicamc/applesoss", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/applesoss"}, {"uid": "github/radicamc/exoTEDRF", "html_url": "https://rseng.github.io/software/repository/github/radicamc/exoTEDRF", "api_url": "https://rseng.github.io/software/api/repos/github/radicamc/exoTEDRF"}, {"uid": "github/mariapetro/LeHaMoC", "html_url": "https://rseng.github.io/software/repository/github/mariapetro/LeHaMoC", "api_url": "https://rseng.github.io/software/api/repos/github/mariapetro/LeHaMoC"}, {"uid": "github/davtsang/slimplectic", "html_url": "https://rseng.github.io/software/repository/github/davtsang/slimplectic", "api_url": "https://rseng.github.io/software/api/repos/github/davtsang/slimplectic"}, {"uid": "github/sashakolpakov/dire-jax", "html_url": "https://rseng.github.io/software/repository/github/sashakolpakov/dire-jax", "api_url": "https://rseng.github.io/software/api/repos/github/sashakolpakov/dire-jax"}, {"uid": "github/latrop/DECA", "html_url": "https://rseng.github.io/software/repository/github/latrop/DECA", "api_url": "https://rseng.github.io/software/api/repos/github/latrop/DECA"}, {"uid": "github/moeyensj/atm", "html_url": "https://rseng.github.io/software/repository/github/moeyensj/atm", "api_url": "https://rseng.github.io/software/api/repos/github/moeyensj/atm"}, {"uid": "github/genouest/biomaj-cli", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-cli"}, {"uid": "github/genouest/biomaj-daemon", "html_url": "https://rseng.github.io/software/repository/github/genouest/biomaj-daemon", "api_url": "https://rseng.github.io/software/api/repos/github/genouest/biomaj-daemon"}, {"uid": "github/ABard0/MDGF-MCEC", "html_url": "https://rseng.github.io/software/repository/github/ABard0/MDGF-MCEC", "api_url": "https://rseng.github.io/software/api/repos/github/ABard0/MDGF-MCEC"}, {"uid": "github/pangenome/smoothxg", "html_url": "https://rseng.github.io/software/repository/github/pangenome/smoothxg", "api_url": "https://rseng.github.io/software/api/repos/github/pangenome/smoothxg"}, {"uid": "github/ewanbarr/peasoup", "html_url": "https://rseng.github.io/software/repository/github/ewanbarr/peasoup", "api_url": "https://rseng.github.io/software/api/repos/github/ewanbarr/peasoup"}, {"uid": "github/Lyalpha/spalipy", "html_url": "https://rseng.github.io/software/repository/github/Lyalpha/spalipy", "api_url": "https://rseng.github.io/software/api/repos/github/Lyalpha/spalipy"}, {"uid": "github/OrlandoLam/SAMT", "html_url": "https://rseng.github.io/software/repository/github/OrlandoLam/SAMT", "api_url": "https://rseng.github.io/software/api/repos/github/OrlandoLam/SAMT"}, {"uid": "github/danielemichilli/DM_phase", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/DM_phase", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/DM_phase"}, {"uid": "github/danielemichilli/SpS", "html_url": "https://rseng.github.io/software/repository/github/danielemichilli/SpS", "api_url": "https://rseng.github.io/software/api/repos/github/danielemichilli/SpS"}, {"uid": "github/PetroFit/petrofit", "html_url": "https://rseng.github.io/software/repository/github/PetroFit/petrofit", "api_url": "https://rseng.github.io/software/api/repos/github/PetroFit/petrofit"}, {"uid": "github/sodascience/metasyn", "html_url": "https://rseng.github.io/software/repository/github/sodascience/metasyn", "api_url": "https://rseng.github.io/software/api/repos/github/sodascience/metasyn"}, {"uid": "github/TeaspoonTDA/teaspoon", "html_url": "https://rseng.github.io/software/repository/github/TeaspoonTDA/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/github/TeaspoonTDA/teaspoon"}, {"uid": "github/wordsworthgroup/mars_redox_2021", "html_url": "https://rseng.github.io/software/repository/github/wordsworthgroup/mars_redox_2021", "api_url": "https://rseng.github.io/software/api/repos/github/wordsworthgroup/mars_redox_2021"}, {"uid": "github/ishinder/EASTR", "html_url": "https://rseng.github.io/software/repository/github/ishinder/EASTR", "api_url": "https://rseng.github.io/software/api/repos/github/ishinder/EASTR"}, {"uid": "github/jupyterlab/jupyterlab", "html_url": "https://rseng.github.io/software/repository/github/jupyterlab/jupyterlab", "api_url": "https://rseng.github.io/software/api/repos/github/jupyterlab/jupyterlab"}, {"uid": "github/MD-Studio/MDStudio", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/MDStudio", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/MDStudio"}, {"uid": "github/MD-Studio/cerise", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerise", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerise"}, {"uid": "github/MD-Studio/cerulean", "html_url": "https://rseng.github.io/software/repository/github/MD-Studio/cerulean", "api_url": "https://rseng.github.io/software/api/repos/github/MD-Studio/cerulean"}, {"uid": "github/ACCarnall/SpectRes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/SpectRes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/SpectRes"}, {"uid": "github/ACCarnall/bagpipes", "html_url": "https://rseng.github.io/software/repository/github/ACCarnall/bagpipes", "api_url": "https://rseng.github.io/software/api/repos/github/ACCarnall/bagpipes"}, {"uid": "github/dstansby/pfsspy", "html_url": "https://rseng.github.io/software/repository/github/dstansby/pfsspy", "api_url": "https://rseng.github.io/software/api/repos/github/dstansby/pfsspy"}, {"uid": "github/yaml2sbml-dev/yaml2sbml", "html_url": "https://rseng.github.io/software/repository/github/yaml2sbml-dev/yaml2sbml", "api_url": "https://rseng.github.io/software/api/repos/github/yaml2sbml-dev/yaml2sbml"}, {"uid": "github/Sydney-Informatics-Hub/OmixLitMiner", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/OmixLitMiner"}, {"uid": "github/Sydney-Informatics-Hub/geodata-harvester", "html_url": "https://rseng.github.io/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", "api_url": "https://rseng.github.io/software/api/repos/github/Sydney-Informatics-Hub/geodata-harvester"}, {"uid": "github/sap218/jabberwocky", "html_url": "https://rseng.github.io/software/repository/github/sap218/jabberwocky", "api_url": "https://rseng.github.io/software/api/repos/github/sap218/jabberwocky"}, {"uid": "github/kwkx/IPRP", "html_url": "https://rseng.github.io/software/repository/github/kwkx/IPRP", "api_url": "https://rseng.github.io/software/api/repos/github/kwkx/IPRP"}, {"uid": "github/jan-rybizki/gdr2_completeness", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/gdr2_completeness", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/gdr2_completeness"}, {"uid": "github/jan-rybizki/Chempy", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Chempy", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Chempy"}, {"uid": "github/jan-rybizki/Galaxia_wrap", "html_url": "https://rseng.github.io/software/repository/github/jan-rybizki/Galaxia_wrap", "api_url": "https://rseng.github.io/software/api/repos/github/jan-rybizki/Galaxia_wrap"}, {"uid": "github/Rnazx/Scaling-Relations", "html_url": "https://rseng.github.io/software/repository/github/Rnazx/Scaling-Relations", "api_url": "https://rseng.github.io/software/api/repos/github/Rnazx/Scaling-Relations"}, {"uid": "github/Social-Evolution-and-Behavior/anTraX", "html_url": "https://rseng.github.io/software/repository/github/Social-Evolution-and-Behavior/anTraX", "api_url": "https://rseng.github.io/software/api/repos/github/Social-Evolution-and-Behavior/anTraX"}, {"uid": "github/remingtonsexton/BADASS3", "html_url": "https://rseng.github.io/software/repository/github/remingtonsexton/BADASS3", "api_url": "https://rseng.github.io/software/api/repos/github/remingtonsexton/BADASS3"}, {"uid": "github/ValeevGroup/mpqc", "html_url": "https://rseng.github.io/software/repository/github/ValeevGroup/mpqc", "api_url": "https://rseng.github.io/software/api/repos/github/ValeevGroup/mpqc"}, {"uid": "github/igrins/plp", "html_url": "https://rseng.github.io/software/repository/github/igrins/plp", "api_url": "https://rseng.github.io/software/api/repos/github/igrins/plp"}, {"uid": "github/slacgismo/solar-data-tools", "html_url": "https://rseng.github.io/software/repository/github/slacgismo/solar-data-tools", "api_url": "https://rseng.github.io/software/api/repos/github/slacgismo/solar-data-tools"}, {"uid": "github/HWang-Summit/HCGrid", "html_url": "https://rseng.github.io/software/repository/github/HWang-Summit/HCGrid", "api_url": "https://rseng.github.io/software/api/repos/github/HWang-Summit/HCGrid"}, {"uid": "github/a-renzini/pygwb", "html_url": "https://rseng.github.io/software/repository/github/a-renzini/pygwb", "api_url": "https://rseng.github.io/software/api/repos/github/a-renzini/pygwb"}, {"uid": "github/stemangiola/tidyHeatmap", "html_url": "https://rseng.github.io/software/repository/github/stemangiola/tidyHeatmap", "api_url": "https://rseng.github.io/software/api/repos/github/stemangiola/tidyHeatmap"}, {"uid": "github/rikenbit/dcTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/dcTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/dcTensor"}, {"uid": "github/rikenbit/OnlinePCA.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlinePCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlinePCA.jl"}, {"uid": "github/rikenbit/OnlineNMF.jl", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/OnlineNMF.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/OnlineNMF.jl"}, {"uid": "github/rikenbit/iTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/iTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/iTensor"}, {"uid": "github/rikenbit/nnTensor", "html_url": "https://rseng.github.io/software/repository/github/rikenbit/nnTensor", "api_url": "https://rseng.github.io/software/api/repos/github/rikenbit/nnTensor"}, {"uid": "github/tscnlab/LightLogR", "html_url": "https://rseng.github.io/software/repository/github/tscnlab/LightLogR", "api_url": "https://rseng.github.io/software/api/repos/github/tscnlab/LightLogR"}, {"uid": "github/laurazara/IgIDivA", "html_url": "https://rseng.github.io/software/repository/github/laurazara/IgIDivA", "api_url": "https://rseng.github.io/software/api/repos/github/laurazara/IgIDivA"}, {"uid": "github/Feng-Ji-Lab/FedIRT", "html_url": "https://rseng.github.io/software/repository/github/Feng-Ji-Lab/FedIRT", "api_url": "https://rseng.github.io/software/api/repos/github/Feng-Ji-Lab/FedIRT"}, {"uid": "github/ccsb-scripps/Illustrate", "html_url": "https://rseng.github.io/software/repository/github/ccsb-scripps/Illustrate", "api_url": "https://rseng.github.io/software/api/repos/github/ccsb-scripps/Illustrate"}, {"uid": "github/kennethcarrell/ATARRI", "html_url": "https://rseng.github.io/software/repository/github/kennethcarrell/ATARRI", "api_url": "https://rseng.github.io/software/api/repos/github/kennethcarrell/ATARRI"}, {"uid": "github/ziyewang/ARG_SHINE", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/ARG_SHINE", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/ARG_SHINE"}, {"uid": "github/ziyewang/MetaBinner", "html_url": "https://rseng.github.io/software/repository/github/ziyewang/MetaBinner", "api_url": "https://rseng.github.io/software/api/repos/github/ziyewang/MetaBinner"}, {"uid": "github/JunTaoLuo/mctreesearch4j", "html_url": "https://rseng.github.io/software/repository/github/JunTaoLuo/mctreesearch4j", "api_url": "https://rseng.github.io/software/api/repos/github/JunTaoLuo/mctreesearch4j"}, {"uid": "github/Danko-Lab/dREG", "html_url": "https://rseng.github.io/software/repository/github/Danko-Lab/dREG", "api_url": "https://rseng.github.io/software/api/repos/github/Danko-Lab/dREG"}, {"uid": "github/mrc-ide/sircovid", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/sircovid", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/sircovid"}, {"uid": "github/mrc-ide/covid19-forecasts-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid19-forecasts-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid19-forecasts-orderly"}, {"uid": "github/mrc-ide/global-lmic-reports-orderly", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/global-lmic-reports-orderly", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/global-lmic-reports-orderly"}, {"uid": "github/mrc-ide/dde", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dde", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dde"}, {"uid": "github/mrc-ide/drjacoby", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/drjacoby", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/drjacoby"}, {"uid": "github/mrc-ide/rrq", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/rrq", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/rrq"}, {"uid": "github/mrc-ide/PhyDyn", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PhyDyn", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PhyDyn"}, {"uid": "github/mrc-ide/EpiEstim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/EpiEstim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/EpiEstim"}, {"uid": "github/mrc-ide/provisionr", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/provisionr", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/provisionr"}, {"uid": "github/mrc-ide/cinterpolate", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/cinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/cinterpolate"}, {"uid": "github/mrc-ide/dust", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/dust", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/dust"}, {"uid": "github/mrc-ide/odin", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/odin", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/odin"}, {"uid": "github/mrc-ide/PlasmoMAPI", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/PlasmoMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/PlasmoMAPI"}, {"uid": "github/mrc-ide/individual", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/individual", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/individual"}, {"uid": "github/mrc-ide/covid-sim", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/covid-sim", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/covid-sim"}, {"uid": "github/mrc-ide/ring", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/ring", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/ring"}, {"uid": "github/mrc-ide/squire", "html_url": "https://rseng.github.io/software/repository/github/mrc-ide/squire", "api_url": "https://rseng.github.io/software/api/repos/github/mrc-ide/squire"}, {"uid": "github/huanghua1994/HiGP", "html_url": "https://rseng.github.io/software/repository/github/huanghua1994/HiGP", "api_url": "https://rseng.github.io/software/api/repos/github/huanghua1994/HiGP"}, {"uid": "github/ByrumLab/proteoDA", "html_url": "https://rseng.github.io/software/repository/github/ByrumLab/proteoDA", "api_url": "https://rseng.github.io/software/api/repos/github/ByrumLab/proteoDA"}, {"uid": "github/nkhorshid/simab", "html_url": "https://rseng.github.io/software/repository/github/nkhorshid/simab", "api_url": "https://rseng.github.io/software/api/repos/github/nkhorshid/simab"}, {"uid": "github/alphapsa/PIPE", "html_url": "https://rseng.github.io/software/repository/github/alphapsa/PIPE", "api_url": "https://rseng.github.io/software/api/repos/github/alphapsa/PIPE"}, {"uid": "github/antismash/antismash", "html_url": "https://rseng.github.io/software/repository/github/antismash/antismash", "api_url": "https://rseng.github.io/software/api/repos/github/antismash/antismash"}, {"uid": "github/haowang-astro/jetsimpy", "html_url": "https://rseng.github.io/software/repository/github/haowang-astro/jetsimpy", "api_url": "https://rseng.github.io/software/api/repos/github/haowang-astro/jetsimpy"}, {"uid": "github/tkonolige/city2ba", "html_url": "https://rseng.github.io/software/repository/github/tkonolige/city2ba", "api_url": "https://rseng.github.io/software/api/repos/github/tkonolige/city2ba"}, {"uid": "github/tylertrimble/viswaternet", "html_url": "https://rseng.github.io/software/repository/github/tylertrimble/viswaternet", "api_url": "https://rseng.github.io/software/api/repos/github/tylertrimble/viswaternet"}, {"uid": "github/bluenote-1577/fairy", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/fairy", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/fairy"}, {"uid": "github/bluenote-1577/sylph", "html_url": "https://rseng.github.io/software/repository/github/bluenote-1577/sylph", "api_url": "https://rseng.github.io/software/api/repos/github/bluenote-1577/sylph"}, {"uid": "github/neuroneural/brainchop", "html_url": "https://rseng.github.io/software/repository/github/neuroneural/brainchop", "api_url": "https://rseng.github.io/software/api/repos/github/neuroneural/brainchop"}, {"uid": "github/sidiwang/snSMART", "html_url": "https://rseng.github.io/software/repository/github/sidiwang/snSMART", "api_url": "https://rseng.github.io/software/api/repos/github/sidiwang/snSMART"}, {"uid": "github/fatmasevinck/enetLTS", "html_url": "https://rseng.github.io/software/repository/github/fatmasevinck/enetLTS", "api_url": "https://rseng.github.io/software/api/repos/github/fatmasevinck/enetLTS"}, {"uid": "github/haoharryfeng/NeuCA", "html_url": "https://rseng.github.io/software/repository/github/haoharryfeng/NeuCA", "api_url": "https://rseng.github.io/software/api/repos/github/haoharryfeng/NeuCA"}, {"uid": "github/psi4/psi4", "html_url": "https://rseng.github.io/software/repository/github/psi4/psi4", "api_url": "https://rseng.github.io/software/api/repos/github/psi4/psi4"}, {"uid": "github/exoml/plan-net", "html_url": "https://rseng.github.io/software/repository/github/exoml/plan-net", "api_url": "https://rseng.github.io/software/api/repos/github/exoml/plan-net"}, {"uid": "github/gerddie/maxflow", "html_url": "https://rseng.github.io/software/repository/github/gerddie/maxflow", "api_url": "https://rseng.github.io/software/api/repos/github/gerddie/maxflow"}, {"uid": "github/GrainLearning/grainLearning", "html_url": "https://rseng.github.io/software/repository/github/GrainLearning/grainLearning", "api_url": "https://rseng.github.io/software/api/repos/github/GrainLearning/grainLearning"}, {"uid": "github/ajshajib/dolphin", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/dolphin"}, {"uid": "github/ajshajib/LensingETC", "html_url": "https://rseng.github.io/software/repository/github/ajshajib/LensingETC", "api_url": "https://rseng.github.io/software/api/repos/github/ajshajib/LensingETC"}, {"uid": "github/RiccardoBiondi/segmentation", "html_url": "https://rseng.github.io/software/repository/github/RiccardoBiondi/segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/RiccardoBiondi/segmentation"}, {"uid": "github/ELELAB/RosettaDDGPrediction", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/RosettaDDGPrediction", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/RosettaDDGPrediction"}, {"uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP"}, {"uid": "github/ELELAB/LipidDyn", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/LipidDyn", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/LipidDyn"}, {"uid": "github/ELELAB/cancermuts", "html_url": "https://rseng.github.io/software/repository/github/ELELAB/cancermuts", "api_url": "https://rseng.github.io/software/api/repos/github/ELELAB/cancermuts"}, {"uid": "github/kmkuesters/pooledpeaks", "html_url": "https://rseng.github.io/software/repository/github/kmkuesters/pooledpeaks", "api_url": "https://rseng.github.io/software/api/repos/github/kmkuesters/pooledpeaks"}, {"uid": "github/jianlin-cheng/DRCon", "html_url": "https://rseng.github.io/software/repository/github/jianlin-cheng/DRCon", "api_url": "https://rseng.github.io/software/api/repos/github/jianlin-cheng/DRCon"}, {"uid": "github/OpenHPS/openhps-core", "html_url": "https://rseng.github.io/software/repository/github/OpenHPS/openhps-core", "api_url": "https://rseng.github.io/software/api/repos/github/OpenHPS/openhps-core"}, {"uid": "github/miriamkw/GluPredKit", "html_url": "https://rseng.github.io/software/repository/github/miriamkw/GluPredKit", "api_url": "https://rseng.github.io/software/api/repos/github/miriamkw/GluPredKit"}, {"uid": "github/ahmedmoustafa/JAligner", "html_url": "https://rseng.github.io/software/repository/github/ahmedmoustafa/JAligner", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmoustafa/JAligner"}, {"uid": "github/MedMaxLab/selfEEG", "html_url": "https://rseng.github.io/software/repository/github/MedMaxLab/selfEEG", "api_url": "https://rseng.github.io/software/api/repos/github/MedMaxLab/selfEEG"}, {"uid": "github/malonge/RagTag", "html_url": "https://rseng.github.io/software/repository/github/malonge/RagTag", "api_url": "https://rseng.github.io/software/api/repos/github/malonge/RagTag"}, {"uid": "github/niess/calzone", "html_url": "https://rseng.github.io/software/repository/github/niess/calzone", "api_url": "https://rseng.github.io/software/api/repos/github/niess/calzone"}, {"uid": "github/LiesaSalzer/MobilityTransformR", "html_url": "https://rseng.github.io/software/repository/github/LiesaSalzer/MobilityTransformR", "api_url": "https://rseng.github.io/software/api/repos/github/LiesaSalzer/MobilityTransformR"}, {"uid": "github/gully/blase", "html_url": "https://rseng.github.io/software/repository/github/gully/blase", "api_url": "https://rseng.github.io/software/api/repos/github/gully/blase"}, {"uid": "github/aqlaboratory/openfold", "html_url": "https://rseng.github.io/software/repository/github/aqlaboratory/openfold", "api_url": "https://rseng.github.io/software/api/repos/github/aqlaboratory/openfold"}, {"uid": "github/ranocha/SummationByPartsOperators.jl", "html_url": "https://rseng.github.io/software/repository/github/ranocha/SummationByPartsOperators.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ranocha/SummationByPartsOperators.jl"}, {"uid": "github/reggiebernardo/PTAfast", "html_url": "https://rseng.github.io/software/repository/github/reggiebernardo/PTAfast", "api_url": "https://rseng.github.io/software/api/repos/github/reggiebernardo/PTAfast"}, {"uid": "github/mdshw5/pyfaidx", "html_url": "https://rseng.github.io/software/repository/github/mdshw5/pyfaidx", "api_url": "https://rseng.github.io/software/api/repos/github/mdshw5/pyfaidx"}, {"uid": "github/rezeebe/orbitN", "html_url": "https://rseng.github.io/software/repository/github/rezeebe/orbitN", "api_url": "https://rseng.github.io/software/api/repos/github/rezeebe/orbitN"}, {"uid": "github/pilon/wiki", "html_url": "https://rseng.github.io/software/repository/github/pilon/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/pilon/wiki"}, {"uid": "github/masoncarney/stepped_luneburg", "html_url": "https://rseng.github.io/software/repository/github/masoncarney/stepped_luneburg", "api_url": "https://rseng.github.io/software/api/repos/github/masoncarney/stepped_luneburg"}, {"uid": "github/pmlmodelling/nctoolkit", "html_url": "https://rseng.github.io/software/repository/github/pmlmodelling/nctoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/pmlmodelling/nctoolkit"}, {"uid": "github/BarquistLab/mason_paper", "html_url": "https://rseng.github.io/software/repository/github/BarquistLab/mason_paper", "api_url": "https://rseng.github.io/software/api/repos/github/BarquistLab/mason_paper"}, {"uid": "github/epi2me-labs/mapula", "html_url": "https://rseng.github.io/software/repository/github/epi2me-labs/mapula", "api_url": "https://rseng.github.io/software/api/repos/github/epi2me-labs/mapula"}, {"uid": "github/uab-cgds-worthey/quac", "html_url": "https://rseng.github.io/software/repository/github/uab-cgds-worthey/quac", "api_url": "https://rseng.github.io/software/api/repos/github/uab-cgds-worthey/quac"}, {"uid": "github/idptools/metapredict", "html_url": "https://rseng.github.io/software/repository/github/idptools/metapredict", "api_url": "https://rseng.github.io/software/api/repos/github/idptools/metapredict"}, {"uid": "github/tensorflow/tensorflow", "html_url": "https://rseng.github.io/software/repository/github/tensorflow/tensorflow", "api_url": "https://rseng.github.io/software/api/repos/github/tensorflow/tensorflow"}, {"uid": "github/eucp-project/storyboards", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/storyboards", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/storyboards"}, {"uid": "github/eucp-project/atlas", "html_url": "https://rseng.github.io/software/repository/github/eucp-project/atlas", "api_url": "https://rseng.github.io/software/api/repos/github/eucp-project/atlas"}, {"uid": "github/phelelani/nf-rnaSeqCount", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqCount", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqCount"}, {"uid": "github/phelelani/nf-rnaSeqMetagen", "html_url": "https://rseng.github.io/software/repository/github/phelelani/nf-rnaSeqMetagen", "api_url": "https://rseng.github.io/software/api/repos/github/phelelani/nf-rnaSeqMetagen"}, {"uid": "github/pnsaevik/effluent", "html_url": "https://rseng.github.io/software/repository/github/pnsaevik/effluent", "api_url": "https://rseng.github.io/software/api/repos/github/pnsaevik/effluent"}, {"uid": "github/ExoSim/ExoSimPublic", "html_url": "https://rseng.github.io/software/repository/github/ExoSim/ExoSimPublic", "api_url": "https://rseng.github.io/software/api/repos/github/ExoSim/ExoSimPublic"}, {"uid": "github/benmontet/f3", "html_url": "https://rseng.github.io/software/repository/github/benmontet/f3", "api_url": "https://rseng.github.io/software/api/repos/github/benmontet/f3"}, {"uid": "github/OpenMS/pyopenms-extra", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/pyopenms-extra", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/pyopenms-extra"}, {"uid": "github/OpenMS/OpenMS", "html_url": "https://rseng.github.io/software/repository/github/OpenMS/OpenMS", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMS/OpenMS"}, {"uid": "github/trinotate/trinotatehub.io", "html_url": "https://rseng.github.io/software/repository/github/trinotate/trinotatehub.io", "api_url": "https://rseng.github.io/software/api/repos/github/trinotate/trinotatehub.io"}, {"uid": "github/jiffyclub/palettable", "html_url": "https://rseng.github.io/software/repository/github/jiffyclub/palettable", "api_url": "https://rseng.github.io/software/api/repos/github/jiffyclub/palettable"}, {"uid": "github/mdsteiner/EFAtools", "html_url": "https://rseng.github.io/software/repository/github/mdsteiner/EFAtools", "api_url": "https://rseng.github.io/software/api/repos/github/mdsteiner/EFAtools"}, {"uid": "github/tuoyl/tat-pulsar", "html_url": "https://rseng.github.io/software/repository/github/tuoyl/tat-pulsar", "api_url": "https://rseng.github.io/software/api/repos/github/tuoyl/tat-pulsar"}, {"uid": "github/gorpipe/gor", "html_url": "https://rseng.github.io/software/repository/github/gorpipe/gor", "api_url": "https://rseng.github.io/software/api/repos/github/gorpipe/gor"}, {"uid": "github/QTC-UMD/rydiqule", "html_url": "https://rseng.github.io/software/repository/github/QTC-UMD/rydiqule", "api_url": "https://rseng.github.io/software/api/repos/github/QTC-UMD/rydiqule"}, {"uid": "github/natashabatalha/PandExo", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/PandExo", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/PandExo"}, {"uid": "github/natashabatalha/picaso", "html_url": "https://rseng.github.io/software/repository/github/natashabatalha/picaso", "api_url": "https://rseng.github.io/software/api/repos/github/natashabatalha/picaso"}, {"uid": "github/rbrthogan/GAz", "html_url": "https://rseng.github.io/software/repository/github/rbrthogan/GAz", "api_url": "https://rseng.github.io/software/api/repos/github/rbrthogan/GAz"}, {"uid": "github/IKNL/vantage6", "html_url": "https://rseng.github.io/software/repository/github/IKNL/vantage6", "api_url": "https://rseng.github.io/software/api/repos/github/IKNL/vantage6"}, {"uid": "github/astro-group-bristol/Gradus.jl", "html_url": "https://rseng.github.io/software/repository/github/astro-group-bristol/Gradus.jl", "api_url": "https://rseng.github.io/software/api/repos/github/astro-group-bristol/Gradus.jl"}, {"uid": "github/vterron/lemon", "html_url": "https://rseng.github.io/software/repository/github/vterron/lemon", "api_url": "https://rseng.github.io/software/api/repos/github/vterron/lemon"}, {"uid": "github/nvalimak/fsm-lite", "html_url": "https://rseng.github.io/software/repository/github/nvalimak/fsm-lite", "api_url": "https://rseng.github.io/software/api/repos/github/nvalimak/fsm-lite"}, {"uid": "github/mlipatov/paint_atmospheres", "html_url": "https://rseng.github.io/software/repository/github/mlipatov/paint_atmospheres", "api_url": "https://rseng.github.io/software/api/repos/github/mlipatov/paint_atmospheres"}, {"uid": "github/cy-xu/cosmic-conn", "html_url": "https://rseng.github.io/software/repository/github/cy-xu/cosmic-conn", "api_url": "https://rseng.github.io/software/api/repos/github/cy-xu/cosmic-conn"}, {"uid": "github/lorenzo-rovigatti/oxDNA", "html_url": "https://rseng.github.io/software/repository/github/lorenzo-rovigatti/oxDNA", "api_url": "https://rseng.github.io/software/api/repos/github/lorenzo-rovigatti/oxDNA"}, {"uid": "github/matteobachetti/TOAextractor", "html_url": "https://rseng.github.io/software/repository/github/matteobachetti/TOAextractor", "api_url": "https://rseng.github.io/software/api/repos/github/matteobachetti/TOAextractor"}, {"uid": "github/sintefore/TimeStruct.jl", "html_url": "https://rseng.github.io/software/repository/github/sintefore/TimeStruct.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sintefore/TimeStruct.jl"}, {"uid": "github/GoekeLab/xpore", "html_url": "https://rseng.github.io/software/repository/github/GoekeLab/xpore", "api_url": "https://rseng.github.io/software/api/repos/github/GoekeLab/xpore"}, {"uid": "github/justyncw/STAR_MELT", "html_url": "https://rseng.github.io/software/repository/github/justyncw/STAR_MELT", "api_url": "https://rseng.github.io/software/api/repos/github/justyncw/STAR_MELT"}, {"uid": "github/paulsengroup/StripePy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/StripePy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/StripePy"}, {"uid": "github/paulsengroup/hictkR", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkR", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkR"}, {"uid": "github/paulsengroup/hictk", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictk", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictk"}, {"uid": "github/paulsengroup/hictkpy", "html_url": "https://rseng.github.io/software/repository/github/paulsengroup/hictkpy", "api_url": "https://rseng.github.io/software/api/repos/github/paulsengroup/hictkpy"}, {"uid": "github/ramadatta/CPgeneProfiler", "html_url": "https://rseng.github.io/software/repository/github/ramadatta/CPgeneProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/ramadatta/CPgeneProfiler"}, {"uid": "github/gramos/imagetooth", "html_url": "https://rseng.github.io/software/repository/github/gramos/imagetooth", "api_url": "https://rseng.github.io/software/api/repos/github/gramos/imagetooth"}, {"uid": "github/jasonyangshadow/lpmx", "html_url": "https://rseng.github.io/software/repository/github/jasonyangshadow/lpmx", "api_url": "https://rseng.github.io/software/api/repos/github/jasonyangshadow/lpmx"}, {"uid": "github/ShaunFell/GRBoondi", "html_url": "https://rseng.github.io/software/repository/github/ShaunFell/GRBoondi", "api_url": "https://rseng.github.io/software/api/repos/github/ShaunFell/GRBoondi"}, {"uid": "github/pyamg/pyamg", "html_url": "https://rseng.github.io/software/repository/github/pyamg/pyamg", "api_url": "https://rseng.github.io/software/api/repos/github/pyamg/pyamg"}, {"uid": "github/Magritte-code/pomme", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/pomme", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/pomme"}, {"uid": "github/Magritte-code/Magritte", "html_url": "https://rseng.github.io/software/repository/github/Magritte-code/Magritte", "api_url": "https://rseng.github.io/software/api/repos/github/Magritte-code/Magritte"}, {"uid": "github/mwanakijiji/rrlfe", "html_url": "https://rseng.github.io/software/repository/github/mwanakijiji/rrlfe", "api_url": "https://rseng.github.io/software/api/repos/github/mwanakijiji/rrlfe"}, {"uid": "github/linneas/condetri", "html_url": "https://rseng.github.io/software/repository/github/linneas/condetri", "api_url": "https://rseng.github.io/software/api/repos/github/linneas/condetri"}, {"uid": "github/seawander/centerRadon", "html_url": "https://rseng.github.io/software/repository/github/seawander/centerRadon", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/centerRadon"}, {"uid": "github/seawander/DebrisDiskFM", "html_url": "https://rseng.github.io/software/repository/github/seawander/DebrisDiskFM", "api_url": "https://rseng.github.io/software/api/repos/github/seawander/DebrisDiskFM"}, {"uid": "github/PaulHancock/Aegean", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Aegean", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Aegean"}, {"uid": "github/PaulHancock/Robbie", "html_url": "https://rseng.github.io/software/repository/github/PaulHancock/Robbie", "api_url": "https://rseng.github.io/software/api/repos/github/PaulHancock/Robbie"}, {"uid": "github/B-UMMI/chewBBACA", "html_url": "https://rseng.github.io/software/repository/github/B-UMMI/chewBBACA", "api_url": "https://rseng.github.io/software/api/repos/github/B-UMMI/chewBBACA"}, {"uid": "github/astro-datalab/noaosourcecatalog", "html_url": "https://rseng.github.io/software/repository/github/astro-datalab/noaosourcecatalog", "api_url": "https://rseng.github.io/software/api/repos/github/astro-datalab/noaosourcecatalog"}, {"uid": "github/exoclam/gaspery", "html_url": "https://rseng.github.io/software/repository/github/exoclam/gaspery", "api_url": "https://rseng.github.io/software/api/repos/github/exoclam/gaspery"}, {"uid": "github/andymummeryastro/tidalspin", "html_url": "https://rseng.github.io/software/repository/github/andymummeryastro/tidalspin", "api_url": "https://rseng.github.io/software/api/repos/github/andymummeryastro/tidalspin"}, {"uid": "github/Onogi/VIGoR", "html_url": "https://rseng.github.io/software/repository/github/Onogi/VIGoR", "api_url": "https://rseng.github.io/software/api/repos/github/Onogi/VIGoR"}, {"uid": "github/equipeGST/RiboDoc", "html_url": "https://rseng.github.io/software/repository/github/equipeGST/RiboDoc", "api_url": "https://rseng.github.io/software/api/repos/github/equipeGST/RiboDoc"}, {"uid": "github/pencil-code/pencil-code", "html_url": "https://rseng.github.io/software/repository/github/pencil-code/pencil-code", "api_url": "https://rseng.github.io/software/api/repos/github/pencil-code/pencil-code"}, {"uid": "github/mateidavid/fast5", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/fast5", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/fast5"}, {"uid": "github/mateidavid/nanocall", "html_url": "https://rseng.github.io/software/repository/github/mateidavid/nanocall", "api_url": "https://rseng.github.io/software/api/repos/github/mateidavid/nanocall"}, {"uid": "github/jakobherpich/pyICs", "html_url": "https://rseng.github.io/software/repository/github/jakobherpich/pyICs", "api_url": "https://rseng.github.io/software/api/repos/github/jakobherpich/pyICs"}, {"uid": "github/NeoGeographyToolkit/StereoPipeline", "html_url": "https://rseng.github.io/software/repository/github/NeoGeographyToolkit/StereoPipeline", "api_url": "https://rseng.github.io/software/api/repos/github/NeoGeographyToolkit/StereoPipeline"}, {"uid": "github/macrocosme/amber_meta", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/amber_meta", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/amber_meta"}, {"uid": "github/macrocosme/time_domain_astronomy_sandbox", "html_url": "https://rseng.github.io/software/repository/github/macrocosme/time_domain_astronomy_sandbox", "api_url": "https://rseng.github.io/software/api/repos/github/macrocosme/time_domain_astronomy_sandbox"}, {"uid": "github/yhoogstrate/fastafs", "html_url": "https://rseng.github.io/software/repository/github/yhoogstrate/fastafs", "api_url": "https://rseng.github.io/software/api/repos/github/yhoogstrate/fastafs"}, {"uid": "github/NuSpaceSim/nupyprop", "html_url": "https://rseng.github.io/software/repository/github/NuSpaceSim/nupyprop", "api_url": "https://rseng.github.io/software/api/repos/github/NuSpaceSim/nupyprop"}, {"uid": "github/sihanjiao/j-comb", "html_url": "https://rseng.github.io/software/repository/github/sihanjiao/j-comb", "api_url": "https://rseng.github.io/software/api/repos/github/sihanjiao/j-comb"}, {"uid": "github/T-CAIREM/physionet-build", "html_url": "https://rseng.github.io/software/repository/github/T-CAIREM/physionet-build", "api_url": "https://rseng.github.io/software/api/repos/github/T-CAIREM/physionet-build"}, {"uid": "github/tdaylan/pcat", "html_url": "https://rseng.github.io/software/repository/github/tdaylan/pcat", "api_url": "https://rseng.github.io/software/api/repos/github/tdaylan/pcat"}, {"uid": "github/ISISNeutronMuon/quickBayes", "html_url": "https://rseng.github.io/software/repository/github/ISISNeutronMuon/quickBayes", "api_url": "https://rseng.github.io/software/api/repos/github/ISISNeutronMuon/quickBayes"}, {"uid": "github/takafumi291/ESSENCE", "html_url": "https://rseng.github.io/software/repository/github/takafumi291/ESSENCE", "api_url": "https://rseng.github.io/software/api/repos/github/takafumi291/ESSENCE"}, {"uid": "github/thejackal360/OpenPelt-Public", "html_url": "https://rseng.github.io/software/repository/github/thejackal360/OpenPelt-Public", "api_url": "https://rseng.github.io/software/api/repos/github/thejackal360/OpenPelt-Public"}, {"uid": "github/conda/pycosat", "html_url": "https://rseng.github.io/software/repository/github/conda/pycosat", "api_url": "https://rseng.github.io/software/api/repos/github/conda/pycosat"}, {"uid": "github/conda/conda", "html_url": "https://rseng.github.io/software/repository/github/conda/conda", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda"}, {"uid": "github/conda/conda-package-handling", "html_url": "https://rseng.github.io/software/repository/github/conda/conda-package-handling", "api_url": "https://rseng.github.io/software/api/repos/github/conda/conda-package-handling"}, {"uid": "github/AntonelliLab/seqcap_processor", "html_url": "https://rseng.github.io/software/repository/github/AntonelliLab/seqcap_processor", "api_url": "https://rseng.github.io/software/api/repos/github/AntonelliLab/seqcap_processor"}, {"uid": "github/michauhl/RBPBench", "html_url": "https://rseng.github.io/software/repository/github/michauhl/RBPBench", "api_url": "https://rseng.github.io/software/api/repos/github/michauhl/RBPBench"}, {"uid": "github/xfengnefx/hifiasm-meta", "html_url": "https://rseng.github.io/software/repository/github/xfengnefx/hifiasm-meta", "api_url": "https://rseng.github.io/software/api/repos/github/xfengnefx/hifiasm-meta"}, {"uid": "github/genialis/RNAnorm", "html_url": "https://rseng.github.io/software/repository/github/genialis/RNAnorm", "api_url": "https://rseng.github.io/software/api/repos/github/genialis/RNAnorm"}, {"uid": "github/hknd23/idcempy", "html_url": "https://rseng.github.io/software/repository/github/hknd23/idcempy", "api_url": "https://rseng.github.io/software/api/repos/github/hknd23/idcempy"}, {"uid": "github/farhanferoz/MultiNest", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/MultiNest", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/MultiNest"}, {"uid": "github/farhanferoz/BAMBI", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/BAMBI", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/BAMBI"}, {"uid": "github/farhanferoz/SkyNet", "html_url": "https://rseng.github.io/software/repository/github/farhanferoz/SkyNet", "api_url": "https://rseng.github.io/software/api/repos/github/farhanferoz/SkyNet"}, {"uid": "github/AFD-Illinois/ebhlight", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/ebhlight", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/ebhlight"}, {"uid": "github/AFD-Illinois/iharm3d", "html_url": "https://rseng.github.io/software/repository/github/AFD-Illinois/iharm3d", "api_url": "https://rseng.github.io/software/api/repos/github/AFD-Illinois/iharm3d"}, {"uid": "github/landoskape/syd", "html_url": "https://rseng.github.io/software/repository/github/landoskape/syd", "api_url": "https://rseng.github.io/software/api/repos/github/landoskape/syd"}, {"uid": "github/peterjc/galaxy_blast", "html_url": "https://rseng.github.io/software/repository/github/peterjc/galaxy_blast", "api_url": "https://rseng.github.io/software/api/repos/github/peterjc/galaxy_blast"}, {"uid": "github/rfeldmann/leopy", "html_url": "https://rseng.github.io/software/repository/github/rfeldmann/leopy", "api_url": "https://rseng.github.io/software/api/repos/github/rfeldmann/leopy"}, {"uid": "github/mfem/mfem", "html_url": "https://rseng.github.io/software/repository/github/mfem/mfem", "api_url": "https://rseng.github.io/software/api/repos/github/mfem/mfem"}, {"uid": "github/yuansliu/minirmd", "html_url": "https://rseng.github.io/software/repository/github/yuansliu/minirmd", "api_url": "https://rseng.github.io/software/api/repos/github/yuansliu/minirmd"}, {"uid": "github/HinodeXRT/xrtpy", "html_url": "https://rseng.github.io/software/repository/github/HinodeXRT/xrtpy", "api_url": "https://rseng.github.io/software/api/repos/github/HinodeXRT/xrtpy"}, {"uid": "github/fripon/freeture", "html_url": "https://rseng.github.io/software/repository/github/fripon/freeture", "api_url": "https://rseng.github.io/software/api/repos/github/fripon/freeture"}, {"uid": "github/erikbern/ann-benchmarks", "html_url": "https://rseng.github.io/software/repository/github/erikbern/ann-benchmarks", "api_url": "https://rseng.github.io/software/api/repos/github/erikbern/ann-benchmarks"}, {"uid": "github/mlpack/mlpack", "html_url": "https://rseng.github.io/software/repository/github/mlpack/mlpack", "api_url": "https://rseng.github.io/software/api/repos/github/mlpack/mlpack"}, {"uid": "github/peterspackman/occ", "html_url": "https://rseng.github.io/software/repository/github/peterspackman/occ", "api_url": "https://rseng.github.io/software/api/repos/github/peterspackman/occ"}, {"uid": "github/marziarivi/RadioLensfit2", "html_url": "https://rseng.github.io/software/repository/github/marziarivi/RadioLensfit2", "api_url": "https://rseng.github.io/software/api/repos/github/marziarivi/RadioLensfit2"}, {"uid": "github/C-Briddon/SELCIE", "html_url": "https://rseng.github.io/software/repository/github/C-Briddon/SELCIE", "api_url": "https://rseng.github.io/software/api/repos/github/C-Briddon/SELCIE"}, {"uid": "github/afd-illinois/grim", "html_url": "https://rseng.github.io/software/repository/github/afd-illinois/grim", "api_url": "https://rseng.github.io/software/api/repos/github/afd-illinois/grim"}, {"uid": "github/ec363/parsleyapp", "html_url": "https://rseng.github.io/software/repository/github/ec363/parsleyapp", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/parsleyapp"}, {"uid": "github/ec363/fpcountr", "html_url": "https://rseng.github.io/software/repository/github/ec363/fpcountr", "api_url": "https://rseng.github.io/software/api/repos/github/ec363/fpcountr"}, {"uid": "github/YaoGroup/DIFFICE_jax", "html_url": "https://rseng.github.io/software/repository/github/YaoGroup/DIFFICE_jax", "api_url": "https://rseng.github.io/software/api/repos/github/YaoGroup/DIFFICE_jax"}, {"uid": "github/MDamiano/ExoTR", "html_url": "https://rseng.github.io/software/repository/github/MDamiano/ExoTR", "api_url": "https://rseng.github.io/software/api/repos/github/MDamiano/ExoTR"}, {"uid": "github/venkateshgopinath/FAlCon-DNS", "html_url": "https://rseng.github.io/software/repository/github/venkateshgopinath/FAlCon-DNS", "api_url": "https://rseng.github.io/software/api/repos/github/venkateshgopinath/FAlCon-DNS"}, {"uid": "github/GOMC-WSU/GOMC", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/GOMC", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/GOMC"}, {"uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", "html_url": "https://rseng.github.io/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", "api_url": "https://rseng.github.io/software/api/repos/github/GOMC-WSU/MoSDeF-dihedral-fit"}, {"uid": "github/cosimoNigro/agnpy", "html_url": "https://rseng.github.io/software/repository/github/cosimoNigro/agnpy", "api_url": "https://rseng.github.io/software/api/repos/github/cosimoNigro/agnpy"}, {"uid": "github/csinva/imodels", "html_url": "https://rseng.github.io/software/repository/github/csinva/imodels", "api_url": "https://rseng.github.io/software/api/repos/github/csinva/imodels"}, {"uid": "github/mariuzka/pop2net", "html_url": "https://rseng.github.io/software/repository/github/mariuzka/pop2net", "api_url": "https://rseng.github.io/software/api/repos/github/mariuzka/pop2net"}, {"uid": "github/zenitani/OpenMHD", "html_url": "https://rseng.github.io/software/repository/github/zenitani/OpenMHD", "api_url": "https://rseng.github.io/software/api/repos/github/zenitani/OpenMHD"}, {"uid": "github/srigas/jaxkan", "html_url": "https://rseng.github.io/software/repository/github/srigas/jaxkan", "api_url": "https://rseng.github.io/software/api/repos/github/srigas/jaxkan"}, {"uid": "github/Jayshil/pycdata", "html_url": "https://rseng.github.io/software/repository/github/Jayshil/pycdata", "api_url": "https://rseng.github.io/software/api/repos/github/Jayshil/pycdata"}, {"uid": "github/davidogara/hetGPy", "html_url": "https://rseng.github.io/software/repository/github/davidogara/hetGPy", "api_url": "https://rseng.github.io/software/api/repos/github/davidogara/hetGPy"}, {"uid": "github/sys-bio/ratesb_python", "html_url": "https://rseng.github.io/software/repository/github/sys-bio/ratesb_python", "api_url": "https://rseng.github.io/software/api/repos/github/sys-bio/ratesb_python"}, {"uid": "github/Computational-NeuroGenetics/deMeta-beta", "html_url": "https://rseng.github.io/software/repository/github/Computational-NeuroGenetics/deMeta-beta", "api_url": "https://rseng.github.io/software/api/repos/github/Computational-NeuroGenetics/deMeta-beta"}, {"uid": "github/davidpamos/MultiModes", "html_url": "https://rseng.github.io/software/repository/github/davidpamos/MultiModes", "api_url": "https://rseng.github.io/software/api/repos/github/davidpamos/MultiModes"}, {"uid": "github/JuliaHealth/NeuroAnalyzer.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHealth/NeuroAnalyzer.jl"}, {"uid": "github/SeamusClarke/FragMent", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/FragMent", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/FragMent"}, {"uid": "github/SeamusClarke/BTS", "html_url": "https://rseng.github.io/software/repository/github/SeamusClarke/BTS", "api_url": "https://rseng.github.io/software/api/repos/github/SeamusClarke/BTS"}, {"uid": "github/cancerit/alleleCount", "html_url": "https://rseng.github.io/software/repository/github/cancerit/alleleCount", "api_url": "https://rseng.github.io/software/api/repos/github/cancerit/alleleCount"}, {"uid": "github/saeyslab/CytoNorm_Figures", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/CytoNorm_Figures", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/CytoNorm_Figures"}, {"uid": "github/saeyslab/PeacoQC", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/PeacoQC", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/PeacoQC"}, {"uid": "github/saeyslab/nichenetr", "html_url": "https://rseng.github.io/software/repository/github/saeyslab/nichenetr", "api_url": "https://rseng.github.io/software/api/repos/github/saeyslab/nichenetr"}, {"uid": "github/materialsproject/pymatgen-analysis-defects", "html_url": "https://rseng.github.io/software/repository/github/materialsproject/pymatgen-analysis-defects", "api_url": "https://rseng.github.io/software/api/repos/github/materialsproject/pymatgen-analysis-defects"}, {"uid": "github/IPESE/REHO", "html_url": "https://rseng.github.io/software/repository/github/IPESE/REHO", "api_url": "https://rseng.github.io/software/api/repos/github/IPESE/REHO"}, {"uid": "github/COBRAPROsimulator/COBRAPRO", "html_url": "https://rseng.github.io/software/repository/github/COBRAPROsimulator/COBRAPRO", "api_url": "https://rseng.github.io/software/api/repos/github/COBRAPROsimulator/COBRAPRO"}, {"uid": "github/NCIP/visda", "html_url": "https://rseng.github.io/software/repository/github/NCIP/visda", "api_url": "https://rseng.github.io/software/api/repos/github/NCIP/visda"}, {"uid": "github/florianfranz/topo_chronia", "html_url": "https://rseng.github.io/software/repository/github/florianfranz/topo_chronia", "api_url": "https://rseng.github.io/software/api/repos/github/florianfranz/topo_chronia"}, {"uid": "github/leapigufpb/FuzzyClass", "html_url": "https://rseng.github.io/software/repository/github/leapigufpb/FuzzyClass", "api_url": "https://rseng.github.io/software/api/repos/github/leapigufpb/FuzzyClass"}, {"uid": "github/fzi-forschungszentrum-informatik/TSInterpret", "html_url": "https://rseng.github.io/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", "api_url": "https://rseng.github.io/software/api/repos/github/fzi-forschungszentrum-informatik/TSInterpret"}, {"uid": "github/baiwenjia/ukbb_cardiac", "html_url": "https://rseng.github.io/software/repository/github/baiwenjia/ukbb_cardiac", "api_url": "https://rseng.github.io/software/api/repos/github/baiwenjia/ukbb_cardiac"}, {"uid": "github/daniloceano/CycloPhaser", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/CycloPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/CycloPhaser"}, {"uid": "github/daniloceano/LorenzCycleToolkit", "html_url": "https://rseng.github.io/software/repository/github/daniloceano/LorenzCycleToolkit", "api_url": "https://rseng.github.io/software/api/repos/github/daniloceano/LorenzCycleToolkit"}, {"uid": "github/mjshao06/pdifFinder", "html_url": "https://rseng.github.io/software/repository/github/mjshao06/pdifFinder", "api_url": "https://rseng.github.io/software/api/repos/github/mjshao06/pdifFinder"}, {"uid": "github/COINtoolbox/DRACULA", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/DRACULA", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/DRACULA"}, {"uid": "github/COINtoolbox/ActSNClass", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/ActSNClass", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/ActSNClass"}, {"uid": "github/COINtoolbox/CosmoPhotoz", "html_url": "https://rseng.github.io/software/repository/github/COINtoolbox/CosmoPhotoz", "api_url": "https://rseng.github.io/software/api/repos/github/COINtoolbox/CosmoPhotoz"}, {"uid": "github/ICESat2-SlideRule/paper", "html_url": "https://rseng.github.io/software/repository/github/ICESat2-SlideRule/paper", "api_url": "https://rseng.github.io/software/api/repos/github/ICESat2-SlideRule/paper"}, {"uid": "github/agsreejith/CONTROL", "html_url": "https://rseng.github.io/software/repository/github/agsreejith/CONTROL", "api_url": "https://rseng.github.io/software/api/repos/github/agsreejith/CONTROL"}, {"uid": "github/cds-astro/mocpy", "html_url": "https://rseng.github.io/software/repository/github/cds-astro/mocpy", "api_url": "https://rseng.github.io/software/api/repos/github/cds-astro/mocpy"}, {"uid": "github/mmelwani/AccretR", "html_url": "https://rseng.github.io/software/repository/github/mmelwani/AccretR", "api_url": "https://rseng.github.io/software/api/repos/github/mmelwani/AccretR"}, {"uid": "github/Muszeb/ENQUIRE", "html_url": "https://rseng.github.io/software/repository/github/Muszeb/ENQUIRE", "api_url": "https://rseng.github.io/software/api/repos/github/Muszeb/ENQUIRE"}, {"uid": "github/YonghuiDong/RawHummus", "html_url": "https://rseng.github.io/software/repository/github/YonghuiDong/RawHummus", "api_url": "https://rseng.github.io/software/api/repos/github/YonghuiDong/RawHummus"}, {"uid": "github/creaneroDIAS/beamModelTester", "html_url": "https://rseng.github.io/software/repository/github/creaneroDIAS/beamModelTester", "api_url": "https://rseng.github.io/software/api/repos/github/creaneroDIAS/beamModelTester"}, {"uid": "github/deweylab/RSEM", "html_url": "https://rseng.github.io/software/repository/github/deweylab/RSEM", "api_url": "https://rseng.github.io/software/api/repos/github/deweylab/RSEM"}, {"uid": "github/ashleychontos/pySYD", "html_url": "https://rseng.github.io/software/repository/github/ashleychontos/pySYD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleychontos/pySYD"}, {"uid": "github/dokkum/maskfill", "html_url": "https://rseng.github.io/software/repository/github/dokkum/maskfill", "api_url": "https://rseng.github.io/software/api/repos/github/dokkum/maskfill"}, {"uid": "github/GijsMulders/epos", "html_url": "https://rseng.github.io/software/repository/github/GijsMulders/epos", "api_url": "https://rseng.github.io/software/api/repos/github/GijsMulders/epos"}, {"uid": "github/reizio/reiz.io", "html_url": "https://rseng.github.io/software/repository/github/reizio/reiz.io", "api_url": "https://rseng.github.io/software/api/repos/github/reizio/reiz.io"}, {"uid": "github/i4Ds/Karabo-Pipeline", "html_url": "https://rseng.github.io/software/repository/github/i4Ds/Karabo-Pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/i4Ds/Karabo-Pipeline"}, {"uid": "github/SAMI-Galaxy-Survey/sami", "html_url": "https://rseng.github.io/software/repository/github/SAMI-Galaxy-Survey/sami", "api_url": "https://rseng.github.io/software/api/repos/github/SAMI-Galaxy-Survey/sami"}, {"uid": "github/nekokoe/Plasmer", "html_url": "https://rseng.github.io/software/repository/github/nekokoe/Plasmer", "api_url": "https://rseng.github.io/software/api/repos/github/nekokoe/Plasmer"}, {"uid": "github/sciris/sciris", "html_url": "https://rseng.github.io/software/repository/github/sciris/sciris", "api_url": "https://rseng.github.io/software/api/repos/github/sciris/sciris"}, {"uid": "github/tberlok/paicos", "html_url": "https://rseng.github.io/software/repository/github/tberlok/paicos", "api_url": "https://rseng.github.io/software/api/repos/github/tberlok/paicos"}, {"uid": "github/phil-mansfield/shellfish", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/shellfish", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/shellfish"}, {"uid": "github/phil-mansfield/gotetra", "html_url": "https://rseng.github.io/software/repository/github/phil-mansfield/gotetra", "api_url": "https://rseng.github.io/software/api/repos/github/phil-mansfield/gotetra"}, {"uid": "github/slcs-jsc/mptrac", "html_url": "https://rseng.github.io/software/repository/github/slcs-jsc/mptrac", "api_url": "https://rseng.github.io/software/api/repos/github/slcs-jsc/mptrac"}, {"uid": "github/MJTemple/qsogen", "html_url": "https://rseng.github.io/software/repository/github/MJTemple/qsogen", "api_url": "https://rseng.github.io/software/api/repos/github/MJTemple/qsogen"}, {"uid": "github/BlueBrain/BlueCelluLab", "html_url": "https://rseng.github.io/software/repository/github/BlueBrain/BlueCelluLab", "api_url": "https://rseng.github.io/software/api/repos/github/BlueBrain/BlueCelluLab"}, {"uid": "github/sauddy/GRINN", "html_url": "https://rseng.github.io/software/repository/github/sauddy/GRINN", "api_url": "https://rseng.github.io/software/api/repos/github/sauddy/GRINN"}, {"uid": "github/alercebroker/ATAT", "html_url": "https://rseng.github.io/software/repository/github/alercebroker/ATAT", "api_url": "https://rseng.github.io/software/api/repos/github/alercebroker/ATAT"}, {"uid": "github/dominic-chang/Krang.jl", "html_url": "https://rseng.github.io/software/repository/github/dominic-chang/Krang.jl", "api_url": "https://rseng.github.io/software/api/repos/github/dominic-chang/Krang.jl"}, {"uid": "github/tumcms/Open-Infra-Platform", "html_url": "https://rseng.github.io/software/repository/github/tumcms/Open-Infra-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/tumcms/Open-Infra-Platform"}, {"uid": "github/rega-cev/virulign", "html_url": "https://rseng.github.io/software/repository/github/rega-cev/virulign", "api_url": "https://rseng.github.io/software/api/repos/github/rega-cev/virulign"}, {"uid": "github/pacificbiosciences/bam2fastx", "html_url": "https://rseng.github.io/software/repository/github/pacificbiosciences/bam2fastx", "api_url": "https://rseng.github.io/software/api/repos/github/pacificbiosciences/bam2fastx"}, {"uid": "github/kendomaniac/rCASC", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/rCASC", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/rCASC"}, {"uid": "github/kendomaniac/docker4seq", "html_url": "https://rseng.github.io/software/repository/github/kendomaniac/docker4seq", "api_url": "https://rseng.github.io/software/api/repos/github/kendomaniac/docker4seq"}, {"uid": "github/jruffio/breads", "html_url": "https://rseng.github.io/software/repository/github/jruffio/breads", "api_url": "https://rseng.github.io/software/api/repos/github/jruffio/breads"}, {"uid": "github/TianlaiProject/tlpipe", "html_url": "https://rseng.github.io/software/repository/github/TianlaiProject/tlpipe", "api_url": "https://rseng.github.io/software/api/repos/github/TianlaiProject/tlpipe"}, {"uid": "github/WilliamLwj/PyXAB", "html_url": "https://rseng.github.io/software/repository/github/WilliamLwj/PyXAB", "api_url": "https://rseng.github.io/software/api/repos/github/WilliamLwj/PyXAB"}, {"uid": "github/cmateu/galstreams", "html_url": "https://rseng.github.io/software/repository/github/cmateu/galstreams", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/galstreams"}, {"uid": "github/cmateu/PyMGC3", "html_url": "https://rseng.github.io/software/repository/github/cmateu/PyMGC3", "api_url": "https://rseng.github.io/software/api/repos/github/cmateu/PyMGC3"}, {"uid": "github/ch-var/SMART", "html_url": "https://rseng.github.io/software/repository/github/ch-var/SMART", "api_url": "https://rseng.github.io/software/api/repos/github/ch-var/SMART"}, {"uid": "github/Ciela-Institute/caustics", "html_url": "https://rseng.github.io/software/repository/github/Ciela-Institute/caustics", "api_url": "https://rseng.github.io/software/api/repos/github/Ciela-Institute/caustics"}, {"uid": "github/peterk87/sistr_cmd", "html_url": "https://rseng.github.io/software/repository/github/peterk87/sistr_cmd", "api_url": "https://rseng.github.io/software/api/repos/github/peterk87/sistr_cmd"}, {"uid": "github/amiralih/MembraneAnalysis.jl", "html_url": "https://rseng.github.io/software/repository/github/amiralih/MembraneAnalysis.jl", "api_url": "https://rseng.github.io/software/api/repos/github/amiralih/MembraneAnalysis.jl"}, {"uid": "github/LLNL/popclass", "html_url": "https://rseng.github.io/software/repository/github/LLNL/popclass", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/popclass"}, {"uid": "github/LLNL/echemfem", "html_url": "https://rseng.github.io/software/repository/github/LLNL/echemfem", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/echemfem"}, {"uid": "github/LLNL/SSAPy", "html_url": "https://rseng.github.io/software/repository/github/LLNL/SSAPy", "api_url": "https://rseng.github.io/software/api/repos/github/LLNL/SSAPy"}, {"uid": "github/hippylib/soupy", "html_url": "https://rseng.github.io/software/repository/github/hippylib/soupy", "api_url": "https://rseng.github.io/software/api/repos/github/hippylib/soupy"}, {"uid": "github/bretthandrews/flexCE", "html_url": "https://rseng.github.io/software/repository/github/bretthandrews/flexCE", "api_url": "https://rseng.github.io/software/api/repos/github/bretthandrews/flexCE"}, {"uid": "github/qmarcou/IGoR", "html_url": "https://rseng.github.io/software/repository/github/qmarcou/IGoR", "api_url": "https://rseng.github.io/software/api/repos/github/qmarcou/IGoR"}, {"uid": "github/MetaboComp/TriplotGUI", "html_url": "https://rseng.github.io/software/repository/github/MetaboComp/TriplotGUI", "api_url": "https://rseng.github.io/software/api/repos/github/MetaboComp/TriplotGUI"}, {"uid": "github/birnstiel/two-pop-py", "html_url": "https://rseng.github.io/software/repository/github/birnstiel/two-pop-py", "api_url": "https://rseng.github.io/software/api/repos/github/birnstiel/two-pop-py"}, {"uid": "github/PRIS-CV/DS-UI", "html_url": "https://rseng.github.io/software/repository/github/PRIS-CV/DS-UI", "api_url": "https://rseng.github.io/software/api/repos/github/PRIS-CV/DS-UI"}, {"uid": "github/SJaffa/Jplots", "html_url": "https://rseng.github.io/software/repository/github/SJaffa/Jplots", "api_url": "https://rseng.github.io/software/api/repos/github/SJaffa/Jplots"}, {"uid": "github/lpfworld/DMPNet", "html_url": "https://rseng.github.io/software/repository/github/lpfworld/DMPNet", "api_url": "https://rseng.github.io/software/api/repos/github/lpfworld/DMPNet"}, {"uid": "github/umbralcalc/foxi", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/foxi", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/foxi"}, {"uid": "github/umbralcalc/nfield", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/nfield", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/nfield"}, {"uid": "github/umbralcalc/helmpy", "html_url": "https://rseng.github.io/software/repository/github/umbralcalc/helmpy", "api_url": "https://rseng.github.io/software/api/repos/github/umbralcalc/helmpy"}, {"uid": "github/giswqs/geemap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/geemap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/geemap"}, {"uid": "github/giswqs/leafmap", "html_url": "https://rseng.github.io/software/repository/github/giswqs/leafmap", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/leafmap"}, {"uid": "github/giswqs/lidar", "html_url": "https://rseng.github.io/software/repository/github/giswqs/lidar", "api_url": "https://rseng.github.io/software/api/repos/github/giswqs/lidar"}, {"uid": "github/miche-levi/pncbc-eftofpng", "html_url": "https://rseng.github.io/software/repository/github/miche-levi/pncbc-eftofpng", "api_url": "https://rseng.github.io/software/api/repos/github/miche-levi/pncbc-eftofpng"}, {"uid": "github/pymc-devs/pymc3", "html_url": "https://rseng.github.io/software/repository/github/pymc-devs/pymc3", "api_url": "https://rseng.github.io/software/api/repos/github/pymc-devs/pymc3"}, {"uid": "github/rajmadan96/StochasticDominance.jl", "html_url": "https://rseng.github.io/software/repository/github/rajmadan96/StochasticDominance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/rajmadan96/StochasticDominance.jl"}, {"uid": "github/AtrCheema/SeqMetrics", "html_url": "https://rseng.github.io/software/repository/github/AtrCheema/SeqMetrics", "api_url": "https://rseng.github.io/software/api/repos/github/AtrCheema/SeqMetrics"}, {"uid": "github/DochtermannLab/BehavioralHeritability", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/BehavioralHeritability", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/BehavioralHeritability"}, {"uid": "github/DochtermannLab/G-PopComparison", "html_url": "https://rseng.github.io/software/repository/github/DochtermannLab/G-PopComparison", "api_url": "https://rseng.github.io/software/api/repos/github/DochtermannLab/G-PopComparison"}, {"uid": "github/Parsoa/SVDSS", "html_url": "https://rseng.github.io/software/repository/github/Parsoa/SVDSS", "api_url": "https://rseng.github.io/software/api/repos/github/Parsoa/SVDSS"}, {"uid": "github/potassco/clingo", "html_url": "https://rseng.github.io/software/repository/github/potassco/clingo", "api_url": "https://rseng.github.io/software/api/repos/github/potassco/clingo"}, {"uid": "github/Jwindler/PlotHiC", "html_url": "https://rseng.github.io/software/repository/github/Jwindler/PlotHiC", "api_url": "https://rseng.github.io/software/api/repos/github/Jwindler/PlotHiC"}, {"uid": "github/poissonconsulting/bisonpicsuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bisonpicsuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bisonpicsuite"}, {"uid": "github/poissonconsulting/bbousuite", "html_url": "https://rseng.github.io/software/repository/github/poissonconsulting/bbousuite", "api_url": "https://rseng.github.io/software/api/repos/github/poissonconsulting/bbousuite"}, {"uid": "github/hongli-ma/RNANetMotif", "html_url": "https://rseng.github.io/software/repository/github/hongli-ma/RNANetMotif", "api_url": "https://rseng.github.io/software/api/repos/github/hongli-ma/RNANetMotif"}, {"uid": "github/bioinfo-ut/GenomeTester4", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/GenomeTester4", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/GenomeTester4"}, {"uid": "github/bioinfo-ut/PlasmidSeeker", "html_url": "https://rseng.github.io/software/repository/github/bioinfo-ut/PlasmidSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfo-ut/PlasmidSeeker"}, {"uid": "github/geospace-code/h5fortran", "html_url": "https://rseng.github.io/software/repository/github/geospace-code/h5fortran", "api_url": "https://rseng.github.io/software/api/repos/github/geospace-code/h5fortran"}, {"uid": "github/quadram-institute-bioscience/dadaist2", "html_url": "https://rseng.github.io/software/repository/github/quadram-institute-bioscience/dadaist2", "api_url": "https://rseng.github.io/software/api/repos/github/quadram-institute-bioscience/dadaist2"}, {"uid": "github/EmmanuelSchaan/LaSSI", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LaSSI", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LaSSI"}, {"uid": "github/EmmanuelSchaan/ThumbStack", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/ThumbStack", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/ThumbStack"}, {"uid": "github/EmmanuelSchaan/HaloGen", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/HaloGen", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/HaloGen"}, {"uid": "github/EmmanuelSchaan/LensQuEst", "html_url": "https://rseng.github.io/software/repository/github/EmmanuelSchaan/LensQuEst", "api_url": "https://rseng.github.io/software/api/repos/github/EmmanuelSchaan/LensQuEst"}, {"uid": "github/eleniadam/npgreat", "html_url": "https://rseng.github.io/software/repository/github/eleniadam/npgreat", "api_url": "https://rseng.github.io/software/api/repos/github/eleniadam/npgreat"}, {"uid": "github/wmalab/EnHiC", "html_url": "https://rseng.github.io/software/repository/github/wmalab/EnHiC", "api_url": "https://rseng.github.io/software/api/repos/github/wmalab/EnHiC"}, {"uid": "github/sid-krish/Rhometa_Full_Genome", "html_url": "https://rseng.github.io/software/repository/github/sid-krish/Rhometa_Full_Genome", "api_url": "https://rseng.github.io/software/api/repos/github/sid-krish/Rhometa_Full_Genome"}, {"uid": "github/richteague/eddy", "html_url": "https://rseng.github.io/software/repository/github/richteague/eddy", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/eddy"}, {"uid": "github/richteague/disksurf", "html_url": "https://rseng.github.io/software/repository/github/richteague/disksurf", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/disksurf"}, {"uid": "github/richteague/gofish", "html_url": "https://rseng.github.io/software/repository/github/richteague/gofish", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/gofish"}, {"uid": "github/richteague/bettermoments", "html_url": "https://rseng.github.io/software/repository/github/richteague/bettermoments", "api_url": "https://rseng.github.io/software/api/repos/github/richteague/bettermoments"}, {"uid": "github/connectomicslab/connectomemapper3", "html_url": "https://rseng.github.io/software/repository/github/connectomicslab/connectomemapper3", "api_url": "https://rseng.github.io/software/api/repos/github/connectomicslab/connectomemapper3"}, {"uid": "github/mattwarkentin/openmpp", "html_url": "https://rseng.github.io/software/repository/github/mattwarkentin/openmpp", "api_url": "https://rseng.github.io/software/api/repos/github/mattwarkentin/openmpp"}, {"uid": "github/matplotlib/matplotlib", "html_url": "https://rseng.github.io/software/repository/github/matplotlib/matplotlib", "api_url": "https://rseng.github.io/software/api/repos/github/matplotlib/matplotlib"}, {"uid": "github/ben-cassese/squishyplanet", "html_url": "https://rseng.github.io/software/repository/github/ben-cassese/squishyplanet", "api_url": "https://rseng.github.io/software/api/repos/github/ben-cassese/squishyplanet"}, {"uid": "github/FelixKrueger/TrimGalore", "html_url": "https://rseng.github.io/software/repository/github/FelixKrueger/TrimGalore", "api_url": "https://rseng.github.io/software/api/repos/github/FelixKrueger/TrimGalore"}, {"uid": "github/mad-lab-fau/tpcp", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/tpcp", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/tpcp"}, {"uid": "github/mad-lab-fau/imucal", "html_url": "https://rseng.github.io/software/repository/github/mad-lab-fau/imucal", "api_url": "https://rseng.github.io/software/api/repos/github/mad-lab-fau/imucal"}, {"uid": "github/sumn2u/annotate-lab", "html_url": "https://rseng.github.io/software/repository/github/sumn2u/annotate-lab", "api_url": "https://rseng.github.io/software/api/repos/github/sumn2u/annotate-lab"}, {"uid": "github/masadcv/FastGeodis", "html_url": "https://rseng.github.io/software/repository/github/masadcv/FastGeodis", "api_url": "https://rseng.github.io/software/api/repos/github/masadcv/FastGeodis"}, {"uid": "github/kevin-tofu/scikit-topt", "html_url": "https://rseng.github.io/software/repository/github/kevin-tofu/scikit-topt", "api_url": "https://rseng.github.io/software/api/repos/github/kevin-tofu/scikit-topt"}, {"uid": "github/exoclime/Helios-r2", "html_url": "https://rseng.github.io/software/repository/github/exoclime/Helios-r2", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/Helios-r2"}, {"uid": "github/exoclime/THOR", "html_url": "https://rseng.github.io/software/repository/github/exoclime/THOR", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/THOR"}, {"uid": "github/exoclime/HELA", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELA", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELA"}, {"uid": "github/exoclime/HELIOS-K", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS-K", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS-K"}, {"uid": "github/exoclime/VULCAN", "html_url": "https://rseng.github.io/software/repository/github/exoclime/VULCAN", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/VULCAN"}, {"uid": "github/exoclime/FastChem", "html_url": "https://rseng.github.io/software/repository/github/exoclime/FastChem", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/FastChem"}, {"uid": "github/exoclime/HELIOS", "html_url": "https://rseng.github.io/software/repository/github/exoclime/HELIOS", "api_url": "https://rseng.github.io/software/api/repos/github/exoclime/HELIOS"}, {"uid": "github/cosmo-ethz/CosmoHammer", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/CosmoHammer", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/CosmoHammer"}, {"uid": "github/cosmo-ethz/seek", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/seek", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/seek"}, {"uid": "github/cosmo-ethz/hide", "html_url": "https://rseng.github.io/software/repository/github/cosmo-ethz/hide", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-ethz/hide"}, {"uid": "github/tanhevg/GpABC.jl", "html_url": "https://rseng.github.io/software/repository/github/tanhevg/GpABC.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tanhevg/GpABC.jl"}, {"uid": "github/zgazak/TAP", "html_url": "https://rseng.github.io/software/repository/github/zgazak/TAP", "api_url": "https://rseng.github.io/software/api/repos/github/zgazak/TAP"}, {"uid": "github/theonefromnowhere/FitCov", "html_url": "https://rseng.github.io/software/repository/github/theonefromnowhere/FitCov", "api_url": "https://rseng.github.io/software/api/repos/github/theonefromnowhere/FitCov"}, {"uid": "github/seheonoh/baygaud", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/baygaud", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/baygaud"}, {"uid": "github/seheonoh/2dbat", "html_url": "https://rseng.github.io/software/repository/github/seheonoh/2dbat", "api_url": "https://rseng.github.io/software/api/repos/github/seheonoh/2dbat"}, {"uid": "github/FEniCS/basix", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/basix", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/basix"}, {"uid": "github/FEniCS/ffcx", "html_url": "https://rseng.github.io/software/repository/github/FEniCS/ffcx", "api_url": "https://rseng.github.io/software/api/repos/github/FEniCS/ffcx"}, {"uid": "github/open2c/pairtools", "html_url": "https://rseng.github.io/software/repository/github/open2c/pairtools", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/pairtools"}, {"uid": "github/open2c/polychrom", "html_url": "https://rseng.github.io/software/repository/github/open2c/polychrom", "api_url": "https://rseng.github.io/software/api/repos/github/open2c/polychrom"}, {"uid": "github/shergreen/SatGen", "html_url": "https://rseng.github.io/software/repository/github/shergreen/SatGen", "api_url": "https://rseng.github.io/software/api/repos/github/shergreen/SatGen"}, {"uid": "github/chervias/DustFilaments", "html_url": "https://rseng.github.io/software/repository/github/chervias/DustFilaments", "api_url": "https://rseng.github.io/software/api/repos/github/chervias/DustFilaments"}, {"uid": "github/homerjed/sbgm", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbgm", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbgm"}, {"uid": "github/homerjed/sbiax", "html_url": "https://rseng.github.io/software/repository/github/homerjed/sbiax", "api_url": "https://rseng.github.io/software/api/repos/github/homerjed/sbiax"}, {"uid": "github/thegenemyers/DALIGNER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DALIGNER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DALIGNER"}, {"uid": "github/thegenemyers/DAMAPPER", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAMAPPER", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAMAPPER"}, {"uid": "github/thegenemyers/FASTK", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/FASTK", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/FASTK"}, {"uid": "github/thegenemyers/DAZZ_DB", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DAZZ_DB", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DAZZ_DB"}, {"uid": "github/thegenemyers/DEXTRACTOR", "html_url": "https://rseng.github.io/software/repository/github/thegenemyers/DEXTRACTOR", "api_url": "https://rseng.github.io/software/api/repos/github/thegenemyers/DEXTRACTOR"}, {"uid": "github/RussellJurek/busy-function-fitting", "html_url": "https://rseng.github.io/software/repository/github/RussellJurek/busy-function-fitting", "api_url": "https://rseng.github.io/software/api/repos/github/RussellJurek/busy-function-fitting"}, {"uid": "github/EACcodes/TigerCI", "html_url": "https://rseng.github.io/software/repository/github/EACcodes/TigerCI", "api_url": "https://rseng.github.io/software/api/repos/github/EACcodes/TigerCI"}, {"uid": "github/hoechenberger/questplus", "html_url": "https://rseng.github.io/software/repository/github/hoechenberger/questplus", "api_url": "https://rseng.github.io/software/api/repos/github/hoechenberger/questplus"}, {"uid": "github/refresh-bio/agc", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/agc", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/agc"}, {"uid": "github/refresh-bio/whisper", "html_url": "https://rseng.github.io/software/repository/github/refresh-bio/whisper", "api_url": "https://rseng.github.io/software/api/repos/github/refresh-bio/whisper"}, {"uid": "github/seqcode/allo", "html_url": "https://rseng.github.io/software/repository/github/seqcode/allo", "api_url": "https://rseng.github.io/software/api/repos/github/seqcode/allo"}, {"uid": "github/AngusWright/LAMBDAR", "html_url": "https://rseng.github.io/software/repository/github/AngusWright/LAMBDAR", "api_url": "https://rseng.github.io/software/api/repos/github/AngusWright/LAMBDAR"}, {"uid": "github/beckermr/calclens", "html_url": "https://rseng.github.io/software/repository/github/beckermr/calclens", "api_url": "https://rseng.github.io/software/api/repos/github/beckermr/calclens"}, {"uid": "github/bblodfon/emba", "html_url": "https://rseng.github.io/software/repository/github/bblodfon/emba", "api_url": "https://rseng.github.io/software/api/repos/github/bblodfon/emba"}, {"uid": "github/helenqu/scone", "html_url": "https://rseng.github.io/software/repository/github/helenqu/scone", "api_url": "https://rseng.github.io/software/api/repos/github/helenqu/scone"}, {"uid": "github/IBM/topography-searcher", "html_url": "https://rseng.github.io/software/repository/github/IBM/topography-searcher", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/topography-searcher"}, {"uid": "github/IBM/fold2seq", "html_url": "https://rseng.github.io/software/repository/github/IBM/fold2seq", "api_url": "https://rseng.github.io/software/api/repos/github/IBM/fold2seq"}, {"uid": "github/GunzIvan28/rMAP", "html_url": "https://rseng.github.io/software/repository/github/GunzIvan28/rMAP", "api_url": "https://rseng.github.io/software/api/repos/github/GunzIvan28/rMAP"}, {"uid": "github/VNNikolaidis/nnlib2Rcpp", "html_url": "https://rseng.github.io/software/repository/github/VNNikolaidis/nnlib2Rcpp", "api_url": "https://rseng.github.io/software/api/repos/github/VNNikolaidis/nnlib2Rcpp"}, {"uid": "github/aritrachakrabarty/GPS", "html_url": "https://rseng.github.io/software/repository/github/aritrachakrabarty/GPS", "api_url": "https://rseng.github.io/software/api/repos/github/aritrachakrabarty/GPS"}, {"uid": "github/cadop/seg1d", "html_url": "https://rseng.github.io/software/repository/github/cadop/seg1d", "api_url": "https://rseng.github.io/software/api/repos/github/cadop/seg1d"}, {"uid": "github/napakalas/casbert", "html_url": "https://rseng.github.io/software/repository/github/napakalas/casbert", "api_url": "https://rseng.github.io/software/api/repos/github/napakalas/casbert"}, {"uid": "github/BapMel/mesocalc", "html_url": "https://rseng.github.io/software/repository/github/BapMel/mesocalc", "api_url": "https://rseng.github.io/software/api/repos/github/BapMel/mesocalc"}, {"uid": "github/splicebox/PsiCLASS", "html_url": "https://rseng.github.io/software/repository/github/splicebox/PsiCLASS", "api_url": "https://rseng.github.io/software/api/repos/github/splicebox/PsiCLASS"}, {"uid": "github/vidarsko/ComFiT", "html_url": "https://rseng.github.io/software/repository/github/vidarsko/ComFiT", "api_url": "https://rseng.github.io/software/api/repos/github/vidarsko/ComFiT"}, {"uid": "github/trygvrad/DF-XRM_viz", "html_url": "https://rseng.github.io/software/repository/github/trygvrad/DF-XRM_viz", "api_url": "https://rseng.github.io/software/api/repos/github/trygvrad/DF-XRM_viz"}, {"uid": "github/deepmind/alphafold", "html_url": "https://rseng.github.io/software/repository/github/deepmind/alphafold", "api_url": "https://rseng.github.io/software/api/repos/github/deepmind/alphafold"}, {"uid": "github/mdtanker/polartoolkit", "html_url": "https://rseng.github.io/software/repository/github/mdtanker/polartoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/mdtanker/polartoolkit"}, {"uid": "github/casacore/casacore", "html_url": "https://rseng.github.io/software/repository/github/casacore/casacore", "api_url": "https://rseng.github.io/software/api/repos/github/casacore/casacore"}, {"uid": "github/Multiversario/satcand", "html_url": "https://rseng.github.io/software/repository/github/Multiversario/satcand", "api_url": "https://rseng.github.io/software/api/repos/github/Multiversario/satcand"}, {"uid": "github/JLiangLab/TransVW", "html_url": "https://rseng.github.io/software/repository/github/JLiangLab/TransVW", "api_url": "https://rseng.github.io/software/api/repos/github/JLiangLab/TransVW"}, {"uid": "github/arangrhie/merfin", "html_url": "https://rseng.github.io/software/repository/github/arangrhie/merfin", "api_url": "https://rseng.github.io/software/api/repos/github/arangrhie/merfin"}, {"uid": "github/R-Computing-Lab/ggpedigree", "html_url": "https://rseng.github.io/software/repository/github/R-Computing-Lab/ggpedigree", "api_url": "https://rseng.github.io/software/api/repos/github/R-Computing-Lab/ggpedigree"}, {"uid": "github/sntioudis/papreca", "html_url": "https://rseng.github.io/software/repository/github/sntioudis/papreca", "api_url": "https://rseng.github.io/software/api/repos/github/sntioudis/papreca"}, {"uid": "github/mbaes/SpheCow", "html_url": "https://rseng.github.io/software/repository/github/mbaes/SpheCow", "api_url": "https://rseng.github.io/software/api/repos/github/mbaes/SpheCow"}, {"uid": "github/pyvisa/pyvisa", "html_url": "https://rseng.github.io/software/repository/github/pyvisa/pyvisa", "api_url": "https://rseng.github.io/software/api/repos/github/pyvisa/pyvisa"}, {"uid": "github/djones1040/PythonPhot", "html_url": "https://rseng.github.io/software/repository/github/djones1040/PythonPhot", "api_url": "https://rseng.github.io/software/api/repos/github/djones1040/PythonPhot"}, {"uid": "github/pytorch/vision", "html_url": "https://rseng.github.io/software/repository/github/pytorch/vision", "api_url": "https://rseng.github.io/software/api/repos/github/pytorch/vision"}, {"uid": "github/esplint/IRACpm", "html_url": "https://rseng.github.io/software/repository/github/esplint/IRACpm", "api_url": "https://rseng.github.io/software/api/repos/github/esplint/IRACpm"}, {"uid": "github/cochran4/GEMB", "html_url": "https://rseng.github.io/software/repository/github/cochran4/GEMB", "api_url": "https://rseng.github.io/software/api/repos/github/cochran4/GEMB"}, {"uid": "github/viromelab/tracespipe", "html_url": "https://rseng.github.io/software/repository/github/viromelab/tracespipe", "api_url": "https://rseng.github.io/software/api/repos/github/viromelab/tracespipe"}, {"uid": "github/MDU-PHL/emmtyper", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/emmtyper", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/emmtyper"}, {"uid": "github/MDU-PHL/abritamr", "html_url": "https://rseng.github.io/software/repository/github/MDU-PHL/abritamr", "api_url": "https://rseng.github.io/software/api/repos/github/MDU-PHL/abritamr"}, {"uid": "github/MJCliffe/PASCal", "html_url": "https://rseng.github.io/software/repository/github/MJCliffe/PASCal", "api_url": "https://rseng.github.io/software/api/repos/github/MJCliffe/PASCal"}, {"uid": "github/metageni/FOCUS", "html_url": "https://rseng.github.io/software/repository/github/metageni/FOCUS", "api_url": "https://rseng.github.io/software/api/repos/github/metageni/FOCUS"}, {"uid": "github/ToyotaCRDL/mahos", "html_url": "https://rseng.github.io/software/repository/github/ToyotaCRDL/mahos", "api_url": "https://rseng.github.io/software/api/repos/github/ToyotaCRDL/mahos"}, {"uid": "github/ColmTalbot/gwpopulation", "html_url": "https://rseng.github.io/software/repository/github/ColmTalbot/gwpopulation", "api_url": "https://rseng.github.io/software/api/repos/github/ColmTalbot/gwpopulation"}, {"uid": "github/tatekawa-astron/3LPT-init", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/3LPT-init", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/3LPT-init"}, {"uid": "github/tatekawa-astron/PN", "html_url": "https://rseng.github.io/software/repository/github/tatekawa-astron/PN", "api_url": "https://rseng.github.io/software/api/repos/github/tatekawa-astron/PN"}, {"uid": "github/AmruteLab/PyChelator", "html_url": "https://rseng.github.io/software/repository/github/AmruteLab/PyChelator", "api_url": "https://rseng.github.io/software/api/repos/github/AmruteLab/PyChelator"}, {"uid": "github/xstarkit/mpi_xstar", "html_url": "https://rseng.github.io/software/repository/github/xstarkit/mpi_xstar", "api_url": "https://rseng.github.io/software/api/repos/github/xstarkit/mpi_xstar"}, {"uid": "github/bioinform/somaticseq", "html_url": "https://rseng.github.io/software/repository/github/bioinform/somaticseq", "api_url": "https://rseng.github.io/software/api/repos/github/bioinform/somaticseq"}, {"uid": "github/desResLab/LINFA", "html_url": "https://rseng.github.io/software/repository/github/desResLab/LINFA", "api_url": "https://rseng.github.io/software/api/repos/github/desResLab/LINFA"}, {"uid": "github/davidsoergel/rtax", "html_url": "https://rseng.github.io/software/repository/github/davidsoergel/rtax", "api_url": "https://rseng.github.io/software/api/repos/github/davidsoergel/rtax"}, {"uid": "github/fcastagna/preprofit", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/preprofit", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/preprofit"}, {"uid": "github/fcastagna/JoXSZ", "html_url": "https://rseng.github.io/software/repository/github/fcastagna/JoXSZ", "api_url": "https://rseng.github.io/software/api/repos/github/fcastagna/JoXSZ"}, {"uid": "github/benstahl92/deepSIP", "html_url": "https://rseng.github.io/software/repository/github/benstahl92/deepSIP", "api_url": "https://rseng.github.io/software/api/repos/github/benstahl92/deepSIP"}, {"uid": "github/TRI-AMDD/GMP-featurizer", "html_url": "https://rseng.github.io/software/repository/github/TRI-AMDD/GMP-featurizer", "api_url": "https://rseng.github.io/software/api/repos/github/TRI-AMDD/GMP-featurizer"}, {"uid": "github/koustavchandra/gwforge", "html_url": "https://rseng.github.io/software/repository/github/koustavchandra/gwforge", "api_url": "https://rseng.github.io/software/api/repos/github/koustavchandra/gwforge"}, {"uid": "github/RadioAstronomySoftwareGroup/pyradiosky", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyradiosky"}, {"uid": "github/RadioAstronomySoftwareGroup/pyuvdata", "html_url": "https://rseng.github.io/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", "api_url": "https://rseng.github.io/software/api/repos/github/RadioAstronomySoftwareGroup/pyuvdata"}, {"uid": "github/Jingxuan97/nemesispy", "html_url": "https://rseng.github.io/software/repository/github/Jingxuan97/nemesispy", "api_url": "https://rseng.github.io/software/api/repos/github/Jingxuan97/nemesispy"}, {"uid": "github/kuenzelab/ENDURE", "html_url": "https://rseng.github.io/software/repository/github/kuenzelab/ENDURE", "api_url": "https://rseng.github.io/software/api/repos/github/kuenzelab/ENDURE"}, {"uid": "github/amueller/word_cloud", "html_url": "https://rseng.github.io/software/repository/github/amueller/word_cloud", "api_url": "https://rseng.github.io/software/api/repos/github/amueller/word_cloud"}, {"uid": "github/Caltech-IPAC/kete", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/kete", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/kete"}, {"uid": "github/Caltech-IPAC/Montage", "html_url": "https://rseng.github.io/software/repository/github/Caltech-IPAC/Montage", "api_url": "https://rseng.github.io/software/api/repos/github/Caltech-IPAC/Montage"}, {"uid": "github/engyasin/Offline_MOT", "html_url": "https://rseng.github.io/software/repository/github/engyasin/Offline_MOT", "api_url": "https://rseng.github.io/software/api/repos/github/engyasin/Offline_MOT"}, {"uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", "html_url": "https://rseng.github.io/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", "api_url": "https://rseng.github.io/software/api/repos/github/MehrnooshTahani/MappingBLOS_MolecularClouds"}, {"uid": "github/mlaparie/sigh", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/sigh", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/sigh"}, {"uid": "github/mlaparie/phidget-tools", "html_url": "https://rseng.github.io/software/repository/github/mlaparie/phidget-tools", "api_url": "https://rseng.github.io/software/api/repos/github/mlaparie/phidget-tools"}, {"uid": "github/eweitz/ideogram", "html_url": "https://rseng.github.io/software/repository/github/eweitz/ideogram", "api_url": "https://rseng.github.io/software/api/repos/github/eweitz/ideogram"}, {"uid": "github/rreischke/OneCovariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/OneCovariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/OneCovariance"}, {"uid": "github/rreischke/frb_covariance", "html_url": "https://rseng.github.io/software/repository/github/rreischke/frb_covariance", "api_url": "https://rseng.github.io/software/api/repos/github/rreischke/frb_covariance"}, {"uid": "github/AOtools/aotools", "html_url": "https://rseng.github.io/software/repository/github/AOtools/aotools", "api_url": "https://rseng.github.io/software/api/repos/github/AOtools/aotools"}, {"uid": "github/brsynth/rp2paths", "html_url": "https://rseng.github.io/software/repository/github/brsynth/rp2paths", "api_url": "https://rseng.github.io/software/api/repos/github/brsynth/rp2paths"}, {"uid": "github/llrs/experDesign", "html_url": "https://rseng.github.io/software/repository/github/llrs/experDesign", "api_url": "https://rseng.github.io/software/api/repos/github/llrs/experDesign"}, {"uid": "github/DaymudeLab/assembly-theory", "html_url": "https://rseng.github.io/software/repository/github/DaymudeLab/assembly-theory", "api_url": "https://rseng.github.io/software/api/repos/github/DaymudeLab/assembly-theory"}, {"uid": "github/henrikmelin/h3ppy", "html_url": "https://rseng.github.io/software/repository/github/henrikmelin/h3ppy", "api_url": "https://rseng.github.io/software/api/repos/github/henrikmelin/h3ppy"}, {"uid": "github/dewberryjanosz/polyrot", "html_url": "https://rseng.github.io/software/repository/github/dewberryjanosz/polyrot", "api_url": "https://rseng.github.io/software/api/repos/github/dewberryjanosz/polyrot"}, {"uid": "github/christopherlovell/sengi", "html_url": "https://rseng.github.io/software/repository/github/christopherlovell/sengi", "api_url": "https://rseng.github.io/software/api/repos/github/christopherlovell/sengi"}, {"uid": "github/nlppln/nlppln", "html_url": "https://rseng.github.io/software/repository/github/nlppln/nlppln", "api_url": "https://rseng.github.io/software/api/repos/github/nlppln/nlppln"}, {"uid": "github/TransDecoder/wiki", "html_url": "https://rseng.github.io/software/repository/github/TransDecoder/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/TransDecoder/wiki"}, {"uid": "github/muttenthalerlab/PeptideMiner", "html_url": "https://rseng.github.io/software/repository/github/muttenthalerlab/PeptideMiner", "api_url": "https://rseng.github.io/software/api/repos/github/muttenthalerlab/PeptideMiner"}, {"uid": "github/baxmittens/VTUFileHandler", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/VTUFileHandler", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/VTUFileHandler"}, {"uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "html_url": "https://rseng.github.io/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", "api_url": "https://rseng.github.io/software/api/repos/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl"}, {"uid": "github/toshiyan/cmblensplus", "html_url": "https://rseng.github.io/software/repository/github/toshiyan/cmblensplus", "api_url": "https://rseng.github.io/software/api/repos/github/toshiyan/cmblensplus"}, {"uid": "github/UNSW-CEEM/nempy", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/nempy", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/nempy"}, {"uid": "github/UNSW-CEEM/NEMSEER", "html_url": "https://rseng.github.io/software/repository/github/UNSW-CEEM/NEMSEER", "api_url": "https://rseng.github.io/software/api/repos/github/UNSW-CEEM/NEMSEER"}, {"uid": "github/maormizrachi/MadVoro", "html_url": "https://rseng.github.io/software/repository/github/maormizrachi/MadVoro", "api_url": "https://rseng.github.io/software/api/repos/github/maormizrachi/MadVoro"}, {"uid": "github/data4goodlab/wgand", "html_url": "https://rseng.github.io/software/repository/github/data4goodlab/wgand", "api_url": "https://rseng.github.io/software/api/repos/github/data4goodlab/wgand"}, {"uid": "github/NLeSC-GO-common-infrastructure/marzipan", "html_url": "https://rseng.github.io/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC-GO-common-infrastructure/marzipan"}, {"uid": "github/sambit-giri/BCMemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCMemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCMemu"}, {"uid": "github/sambit-giri/BCemu", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/BCemu", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/BCemu"}, {"uid": "github/sambit-giri/tools21cm", "html_url": "https://rseng.github.io/software/repository/github/sambit-giri/tools21cm", "api_url": "https://rseng.github.io/software/api/repos/github/sambit-giri/tools21cm"}, {"uid": "github/0satoken/Eclairs", "html_url": "https://rseng.github.io/software/repository/github/0satoken/Eclairs", "api_url": "https://rseng.github.io/software/api/repos/github/0satoken/Eclairs"}, {"uid": "github/canimus/cuallee", "html_url": "https://rseng.github.io/software/repository/github/canimus/cuallee", "api_url": "https://rseng.github.io/software/api/repos/github/canimus/cuallee"}, {"uid": "github/ScialdoneLab/MitoHEAR", "html_url": "https://rseng.github.io/software/repository/github/ScialdoneLab/MitoHEAR", "api_url": "https://rseng.github.io/software/api/repos/github/ScialdoneLab/MitoHEAR"}, {"uid": "github/FreBio/komics", "html_url": "https://rseng.github.io/software/repository/github/FreBio/komics", "api_url": "https://rseng.github.io/software/api/repos/github/FreBio/komics"}, {"uid": "github/songweizhi/Binning_refiner", "html_url": "https://rseng.github.io/software/repository/github/songweizhi/Binning_refiner", "api_url": "https://rseng.github.io/software/api/repos/github/songweizhi/Binning_refiner"}, {"uid": "github/SirSharpest/NarrowEscapeSimulator", "html_url": "https://rseng.github.io/software/repository/github/SirSharpest/NarrowEscapeSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/SirSharpest/NarrowEscapeSimulator"}, {"uid": "github/exomishra/kobe", "html_url": "https://rseng.github.io/software/repository/github/exomishra/kobe", "api_url": "https://rseng.github.io/software/api/repos/github/exomishra/kobe"}, {"uid": "github/voutcn/megahit", "html_url": "https://rseng.github.io/software/repository/github/voutcn/megahit", "api_url": "https://rseng.github.io/software/api/repos/github/voutcn/megahit"}, {"uid": "github/PRIDE-Archive/pridepy", "html_url": "https://rseng.github.io/software/repository/github/PRIDE-Archive/pridepy", "api_url": "https://rseng.github.io/software/api/repos/github/PRIDE-Archive/pridepy"}, {"uid": "github/tramarobin/fctSPM", "html_url": "https://rseng.github.io/software/repository/github/tramarobin/fctSPM", "api_url": "https://rseng.github.io/software/api/repos/github/tramarobin/fctSPM"}, {"uid": "github/icesat2py/icepyx", "html_url": "https://rseng.github.io/software/repository/github/icesat2py/icepyx", "api_url": "https://rseng.github.io/software/api/repos/github/icesat2py/icepyx"}, {"uid": "github/jakelever/civicmine", "html_url": "https://rseng.github.io/software/repository/github/jakelever/civicmine", "api_url": "https://rseng.github.io/software/api/repos/github/jakelever/civicmine"}, {"uid": "github/tjlcbakx/redshift-search-graphs", "html_url": "https://rseng.github.io/software/repository/github/tjlcbakx/redshift-search-graphs", "api_url": "https://rseng.github.io/software/api/repos/github/tjlcbakx/redshift-search-graphs"}, {"uid": "github/pachterlab/kallisto", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kallisto"}, {"uid": "github/pachterlab/kb_python", "html_url": "https://rseng.github.io/software/repository/github/pachterlab/kb_python", "api_url": "https://rseng.github.io/software/api/repos/github/pachterlab/kb_python"}, {"uid": "github/Illumina/akt", "html_url": "https://rseng.github.io/software/repository/github/Illumina/akt", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/akt"}, {"uid": "github/Illumina/MarViN", "html_url": "https://rseng.github.io/software/repository/github/Illumina/MarViN", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/MarViN"}, {"uid": "github/Illumina/manta", "html_url": "https://rseng.github.io/software/repository/github/Illumina/manta", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/manta"}, {"uid": "github/Illumina/ExpansionHunterDenovo", "html_url": "https://rseng.github.io/software/repository/github/Illumina/ExpansionHunterDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/ExpansionHunterDenovo"}, {"uid": "github/Illumina/SpliceAI", "html_url": "https://rseng.github.io/software/repository/github/Illumina/SpliceAI", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/SpliceAI"}, {"uid": "github/Illumina/canvas", "html_url": "https://rseng.github.io/software/repository/github/Illumina/canvas", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/canvas"}, {"uid": "github/Illumina/strelka", "html_url": "https://rseng.github.io/software/repository/github/Illumina/strelka", "api_url": "https://rseng.github.io/software/api/repos/github/Illumina/strelka"}, {"uid": "github/chhylp123/hifiasm", "html_url": "https://rseng.github.io/software/repository/github/chhylp123/hifiasm", "api_url": "https://rseng.github.io/software/api/repos/github/chhylp123/hifiasm"}, {"uid": "github/lutteropp/NetRAX", "html_url": "https://rseng.github.io/software/repository/github/lutteropp/NetRAX", "api_url": "https://rseng.github.io/software/api/repos/github/lutteropp/NetRAX"}, {"uid": "github/wdecoster/chopper", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/chopper", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/chopper"}, {"uid": "github/wdecoster/nanolyse", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanolyse", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanolyse"}, {"uid": "github/wdecoster/nano-snakemake", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nano-snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nano-snakemake"}, {"uid": "github/wdecoster/nanomath", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanomath", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanomath"}, {"uid": "github/wdecoster/nanoQC", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoQC", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoQC"}, {"uid": "github/wdecoster/NanoComp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoComp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoComp"}, {"uid": "github/wdecoster/NanoPlot", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/NanoPlot", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/NanoPlot"}, {"uid": "github/wdecoster/nanofilt", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanofilt", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanofilt"}, {"uid": "github/wdecoster/nanopack", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanopack", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanopack"}, {"uid": "github/wdecoster/nanoget", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanoget", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanoget"}, {"uid": "github/wdecoster/nanostat", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanostat", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanostat"}, {"uid": "github/wdecoster/nanocomp", "html_url": "https://rseng.github.io/software/repository/github/wdecoster/nanocomp", "api_url": "https://rseng.github.io/software/api/repos/github/wdecoster/nanocomp"}, {"uid": "github/FePhyFoFum/phyx", "html_url": "https://rseng.github.io/software/repository/github/FePhyFoFum/phyx", "api_url": "https://rseng.github.io/software/api/repos/github/FePhyFoFum/phyx"}, {"uid": "github/Cloud-Drift/clouddrift", "html_url": "https://rseng.github.io/software/repository/github/Cloud-Drift/clouddrift", "api_url": "https://rseng.github.io/software/api/repos/github/Cloud-Drift/clouddrift"}, {"uid": "github/connor-lab/vapor", "html_url": "https://rseng.github.io/software/repository/github/connor-lab/vapor", "api_url": "https://rseng.github.io/software/api/repos/github/connor-lab/vapor"}, {"uid": "github/r3w0p/bobocep", "html_url": "https://rseng.github.io/software/repository/github/r3w0p/bobocep", "api_url": "https://rseng.github.io/software/api/repos/github/r3w0p/bobocep"}, {"uid": "github/ChristopheBerthod/Piecewise.jl", "html_url": "https://rseng.github.io/software/repository/github/ChristopheBerthod/Piecewise.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ChristopheBerthod/Piecewise.jl"}, {"uid": "github/jamesaird/FAST", "html_url": "https://rseng.github.io/software/repository/github/jamesaird/FAST", "api_url": "https://rseng.github.io/software/api/repos/github/jamesaird/FAST"}, {"uid": "github/privong/pyMCspearman", "html_url": "https://rseng.github.io/software/repository/github/privong/pyMCspearman", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pyMCspearman"}, {"uid": "github/privong/pymccorrelation", "html_url": "https://rseng.github.io/software/repository/github/privong/pymccorrelation", "api_url": "https://rseng.github.io/software/api/repos/github/privong/pymccorrelation"}, {"uid": "github/lynx-x-ray-observatory/soxs", "html_url": "https://rseng.github.io/software/repository/github/lynx-x-ray-observatory/soxs", "api_url": "https://rseng.github.io/software/api/repos/github/lynx-x-ray-observatory/soxs"}, {"uid": "github/lydialucchesi/Vizumap", "html_url": "https://rseng.github.io/software/repository/github/lydialucchesi/Vizumap", "api_url": "https://rseng.github.io/software/api/repos/github/lydialucchesi/Vizumap"}, {"uid": "github/fizban007/Aperture4", "html_url": "https://rseng.github.io/software/repository/github/fizban007/Aperture4", "api_url": "https://rseng.github.io/software/api/repos/github/fizban007/Aperture4"}, {"uid": "github/morriscb/The-wiZZ", "html_url": "https://rseng.github.io/software/repository/github/morriscb/The-wiZZ", "api_url": "https://rseng.github.io/software/api/repos/github/morriscb/The-wiZZ"}, {"uid": "github/husseinaluie/FlowSieve", "html_url": "https://rseng.github.io/software/repository/github/husseinaluie/FlowSieve", "api_url": "https://rseng.github.io/software/api/repos/github/husseinaluie/FlowSieve"}, {"uid": "github/stan-dev/stan", "html_url": "https://rseng.github.io/software/repository/github/stan-dev/stan", "api_url": "https://rseng.github.io/software/api/repos/github/stan-dev/stan"}, {"uid": "github/danielemelini/ALMA3", "html_url": "https://rseng.github.io/software/repository/github/danielemelini/ALMA3", "api_url": "https://rseng.github.io/software/api/repos/github/danielemelini/ALMA3"}, {"uid": "github/telatin/bamtocov", "html_url": "https://rseng.github.io/software/repository/github/telatin/bamtocov", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/bamtocov"}, {"uid": "github/telatin/covtobed", "html_url": "https://rseng.github.io/software/repository/github/telatin/covtobed", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/covtobed"}, {"uid": "github/telatin/qax", "html_url": "https://rseng.github.io/software/repository/github/telatin/qax", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/qax"}, {"uid": "github/telatin/seqfu2", "html_url": "https://rseng.github.io/software/repository/github/telatin/seqfu2", "api_url": "https://rseng.github.io/software/api/repos/github/telatin/seqfu2"}, {"uid": "github/mrazomej/AutoEncoderToolkit.jl", "html_url": "https://rseng.github.io/software/repository/github/mrazomej/AutoEncoderToolkit.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mrazomej/AutoEncoderToolkit.jl"}, {"uid": "github/DotBots/qrkey", "html_url": "https://rseng.github.io/software/repository/github/DotBots/qrkey", "api_url": "https://rseng.github.io/software/api/repos/github/DotBots/qrkey"}, {"uid": "github/RafaelSdeSouza/capivara", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/capivara", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/capivara"}, {"uid": "github/RafaelSdeSouza/qrpca", "html_url": "https://rseng.github.io/software/repository/github/RafaelSdeSouza/qrpca", "api_url": "https://rseng.github.io/software/api/repos/github/RafaelSdeSouza/qrpca"}, {"uid": "github/AgentOxygen/HDP", "html_url": "https://rseng.github.io/software/repository/github/AgentOxygen/HDP", "api_url": "https://rseng.github.io/software/api/repos/github/AgentOxygen/HDP"}, {"uid": "github/Valcin/BE_HaPPy", "html_url": "https://rseng.github.io/software/repository/github/Valcin/BE_HaPPy", "api_url": "https://rseng.github.io/software/api/repos/github/Valcin/BE_HaPPy"}, {"uid": "github/YihePang/DisoFLAG", "html_url": "https://rseng.github.io/software/repository/github/YihePang/DisoFLAG", "api_url": "https://rseng.github.io/software/api/repos/github/YihePang/DisoFLAG"}, {"uid": "github/DS4Ag/dpest", "html_url": "https://rseng.github.io/software/repository/github/DS4Ag/dpest", "api_url": "https://rseng.github.io/software/api/repos/github/DS4Ag/dpest"}, {"uid": "github/smoh/kinesis", "html_url": "https://rseng.github.io/software/repository/github/smoh/kinesis", "api_url": "https://rseng.github.io/software/api/repos/github/smoh/kinesis"}, {"uid": "github/tribshms/tRIBS", "html_url": "https://rseng.github.io/software/repository/github/tribshms/tRIBS", "api_url": "https://rseng.github.io/software/api/repos/github/tribshms/tRIBS"}, {"uid": "github/cwru-pat/cmb-multipole_vectors", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cmb-multipole_vectors", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cmb-multipole_vectors"}, {"uid": "github/cwru-pat/cosmograph", "html_url": "https://rseng.github.io/software/repository/github/cwru-pat/cosmograph", "api_url": "https://rseng.github.io/software/api/repos/github/cwru-pat/cosmograph"}, {"uid": "github/bjmorgan/py-sc-fermi", "html_url": "https://rseng.github.io/software/repository/github/bjmorgan/py-sc-fermi", "api_url": "https://rseng.github.io/software/api/repos/github/bjmorgan/py-sc-fermi"}, {"uid": "github/pipliggins/EVolve", "html_url": "https://rseng.github.io/software/repository/github/pipliggins/EVolve", "api_url": "https://rseng.github.io/software/api/repos/github/pipliggins/EVolve"}, {"uid": "github/EcoJulia/EcologicalNetworks.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/EcologicalNetworks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/EcologicalNetworks.jl"}, {"uid": "github/EcoJulia/SimpleSDMLayers.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/SimpleSDMLayers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/SimpleSDMLayers.jl"}, {"uid": "github/EcoJulia/Microbiome.jl", "html_url": "https://rseng.github.io/software/repository/github/EcoJulia/Microbiome.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EcoJulia/Microbiome.jl"}, {"uid": "github/arshajii/ema", "html_url": "https://rseng.github.io/software/repository/github/arshajii/ema", "api_url": "https://rseng.github.io/software/api/repos/github/arshajii/ema"}, {"uid": "github/csbioinfopk/iSumoK-PseAAC", "html_url": "https://rseng.github.io/software/repository/github/csbioinfopk/iSumoK-PseAAC", "api_url": "https://rseng.github.io/software/api/repos/github/csbioinfopk/iSumoK-PseAAC"}, {"uid": "github/maayane/catsHTM", "html_url": "https://rseng.github.io/software/repository/github/maayane/catsHTM", "api_url": "https://rseng.github.io/software/api/repos/github/maayane/catsHTM"}, {"uid": "github/HAWinther/MG-PICOLA-PUBLIC", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/MG-PICOLA-PUBLIC"}, {"uid": "github/HAWinther/FML", "html_url": "https://rseng.github.io/software/repository/github/HAWinther/FML", "api_url": "https://rseng.github.io/software/api/repos/github/HAWinther/FML"}, {"uid": "github/jstuecker/adiabatic-tides", "html_url": "https://rseng.github.io/software/repository/github/jstuecker/adiabatic-tides", "api_url": "https://rseng.github.io/software/api/repos/github/jstuecker/adiabatic-tides"}, {"uid": "github/gt1/bambamc", "html_url": "https://rseng.github.io/software/repository/github/gt1/bambamc", "api_url": "https://rseng.github.io/software/api/repos/github/gt1/bambamc"}, {"uid": "github/sjvrijn/mf2", "html_url": "https://rseng.github.io/software/repository/github/sjvrijn/mf2", "api_url": "https://rseng.github.io/software/api/repos/github/sjvrijn/mf2"}, {"uid": "github/Qiskit-Extensions/qiskit-dynamics", "html_url": "https://rseng.github.io/software/repository/github/Qiskit-Extensions/qiskit-dynamics", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit-Extensions/qiskit-dynamics"}, {"uid": "github/SJ001/AI-Feynman", "html_url": "https://rseng.github.io/software/repository/github/SJ001/AI-Feynman", "api_url": "https://rseng.github.io/software/api/repos/github/SJ001/AI-Feynman"}, {"uid": "github/NIFTI-Imaging/nifti_clib", "html_url": "https://rseng.github.io/software/repository/github/NIFTI-Imaging/nifti_clib", "api_url": "https://rseng.github.io/software/api/repos/github/NIFTI-Imaging/nifti_clib"}, {"uid": "github/valentingar/confluxpro", "html_url": "https://rseng.github.io/software/repository/github/valentingar/confluxpro", "api_url": "https://rseng.github.io/software/api/repos/github/valentingar/confluxpro"}, {"uid": "github/ants-project/ANTs", "html_url": "https://rseng.github.io/software/repository/github/ants-project/ANTs", "api_url": "https://rseng.github.io/software/api/repos/github/ants-project/ANTs"}, {"uid": "github/anuradhawick/LRBinner", "html_url": "https://rseng.github.io/software/repository/github/anuradhawick/LRBinner", "api_url": "https://rseng.github.io/software/api/repos/github/anuradhawick/LRBinner"}, {"uid": "github/iomega/zenodo-upload", "html_url": "https://rseng.github.io/software/repository/github/iomega/zenodo-upload", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/zenodo-upload"}, {"uid": "github/iomega/spec2vec_gnps_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec_gnps_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec_gnps_data_analysis"}, {"uid": "github/iomega/spec2vec", "html_url": "https://rseng.github.io/software/repository/github/iomega/spec2vec", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/spec2vec"}, {"uid": "github/iomega/paired-data-form", "html_url": "https://rseng.github.io/software/repository/github/iomega/paired-data-form", "api_url": "https://rseng.github.io/software/api/repos/github/iomega/paired-data-form"}, {"uid": "github/minterpy-project/minterpy", "html_url": "https://rseng.github.io/software/repository/github/minterpy-project/minterpy", "api_url": "https://rseng.github.io/software/api/repos/github/minterpy-project/minterpy"}, {"uid": "github/thomasorb/orcs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orcs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orcs"}, {"uid": "github/thomasorb/orbs", "html_url": "https://rseng.github.io/software/repository/github/thomasorb/orbs", "api_url": "https://rseng.github.io/software/api/repos/github/thomasorb/orbs"}, {"uid": "github/BiocomputeLab/paraSBOLv", "html_url": "https://rseng.github.io/software/repository/github/BiocomputeLab/paraSBOLv", "api_url": "https://rseng.github.io/software/api/repos/github/BiocomputeLab/paraSBOLv"}, {"uid": "github/CSUBioGroup/GraphLncLoc", "html_url": "https://rseng.github.io/software/repository/github/CSUBioGroup/GraphLncLoc", "api_url": "https://rseng.github.io/software/api/repos/github/CSUBioGroup/GraphLncLoc"}, {"uid": "github/imcgreer/simqso", "html_url": "https://rseng.github.io/software/repository/github/imcgreer/simqso", "api_url": "https://rseng.github.io/software/api/repos/github/imcgreer/simqso"}, {"uid": "github/aiproteomics/aiproteomics", "html_url": "https://rseng.github.io/software/repository/github/aiproteomics/aiproteomics", "api_url": "https://rseng.github.io/software/api/repos/github/aiproteomics/aiproteomics"}, {"uid": "github/Stuermer/EchelleSimulator", "html_url": "https://rseng.github.io/software/repository/github/Stuermer/EchelleSimulator", "api_url": "https://rseng.github.io/software/api/repos/github/Stuermer/EchelleSimulator"}, {"uid": "github/RaRe-Technologies/gensim", "html_url": "https://rseng.github.io/software/repository/github/RaRe-Technologies/gensim", "api_url": "https://rseng.github.io/software/api/repos/github/RaRe-Technologies/gensim"}, {"uid": "github/Natsiopoulos/ARDL", "html_url": "https://rseng.github.io/software/repository/github/Natsiopoulos/ARDL", "api_url": "https://rseng.github.io/software/api/repos/github/Natsiopoulos/ARDL"}, {"uid": "github/morphometry/papaya2", "html_url": "https://rseng.github.io/software/repository/github/morphometry/papaya2", "api_url": "https://rseng.github.io/software/api/repos/github/morphometry/papaya2"}, {"uid": "github/msalibian/RBF", "html_url": "https://rseng.github.io/software/repository/github/msalibian/RBF", "api_url": "https://rseng.github.io/software/api/repos/github/msalibian/RBF"}, {"uid": "github/RAMP-project/RAMP", "html_url": "https://rseng.github.io/software/repository/github/RAMP-project/RAMP", "api_url": "https://rseng.github.io/software/api/repos/github/RAMP-project/RAMP"}, {"uid": "github/jbussemaker/SBArchOpt", "html_url": "https://rseng.github.io/software/repository/github/jbussemaker/SBArchOpt", "api_url": "https://rseng.github.io/software/api/repos/github/jbussemaker/SBArchOpt"}, {"uid": "github/SarveshVGharat/Plages-Identification", "html_url": "https://rseng.github.io/software/repository/github/SarveshVGharat/Plages-Identification", "api_url": "https://rseng.github.io/software/api/repos/github/SarveshVGharat/Plages-Identification"}, {"uid": "github/twinl/website", "html_url": "https://rseng.github.io/software/repository/github/twinl/website", "api_url": "https://rseng.github.io/software/api/repos/github/twinl/website"}, {"uid": "github/amrex-astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Castro"}, {"uid": "github/amrex-astro/MAESTRO", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/MAESTRO", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/MAESTRO"}, {"uid": "github/amrex-astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/amrex-astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/amrex-astro/Nyx"}, {"uid": "github/RichardMoot/GrailLight", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/GrailLight", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/GrailLight"}, {"uid": "github/RichardMoot/LinearOne", "html_url": "https://rseng.github.io/software/repository/github/RichardMoot/LinearOne", "api_url": "https://rseng.github.io/software/api/repos/github/RichardMoot/LinearOne"}, {"uid": "github/showteeth/GEfetch2R", "html_url": "https://rseng.github.io/software/repository/github/showteeth/GEfetch2R", "api_url": "https://rseng.github.io/software/api/repos/github/showteeth/GEfetch2R"}, {"uid": "github/cistrome/MIRA", "html_url": "https://rseng.github.io/software/repository/github/cistrome/MIRA", "api_url": "https://rseng.github.io/software/api/repos/github/cistrome/MIRA"}, {"uid": "github/exosports/MARGE", "html_url": "https://rseng.github.io/software/repository/github/exosports/MARGE", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/MARGE"}, {"uid": "github/exosports/transit", "html_url": "https://rseng.github.io/software/repository/github/exosports/transit", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/transit"}, {"uid": "github/exosports/BART", "html_url": "https://rseng.github.io/software/repository/github/exosports/BART", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/BART"}, {"uid": "github/exosports/homer", "html_url": "https://rseng.github.io/software/repository/github/exosports/homer", "api_url": "https://rseng.github.io/software/api/repos/github/exosports/homer"}, {"uid": "github/NorwegianVeterinaryInstitute/ALPPACA", "html_url": "https://rseng.github.io/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", "api_url": "https://rseng.github.io/software/api/repos/github/NorwegianVeterinaryInstitute/ALPPACA"}, {"uid": "github/BoevaLab/FREEC", "html_url": "https://rseng.github.io/software/repository/github/BoevaLab/FREEC", "api_url": "https://rseng.github.io/software/api/repos/github/BoevaLab/FREEC"}, {"uid": "github/pepamengual/UEP", "html_url": "https://rseng.github.io/software/repository/github/pepamengual/UEP", "api_url": "https://rseng.github.io/software/api/repos/github/pepamengual/UEP"}, {"uid": "github/konkolyseismolab/seismolab", "html_url": "https://rseng.github.io/software/repository/github/konkolyseismolab/seismolab", "api_url": "https://rseng.github.io/software/api/repos/github/konkolyseismolab/seismolab"}, {"uid": "github/vwesselkamp/ernie-extension", "html_url": "https://rseng.github.io/software/repository/github/vwesselkamp/ernie-extension", "api_url": "https://rseng.github.io/software/api/repos/github/vwesselkamp/ernie-extension"}, {"uid": "github/drwaseemsheikh/audiometry", "html_url": "https://rseng.github.io/software/repository/github/drwaseemsheikh/audiometry", "api_url": "https://rseng.github.io/software/api/repos/github/drwaseemsheikh/audiometry"}, {"uid": "github/NASA-PDS/naif-pds4-bundler", "html_url": "https://rseng.github.io/software/repository/github/NASA-PDS/naif-pds4-bundler", "api_url": "https://rseng.github.io/software/api/repos/github/NASA-PDS/naif-pds4-bundler"}, {"uid": "github/AnantharamanLab/vRhyme", "html_url": "https://rseng.github.io/software/repository/github/AnantharamanLab/vRhyme", "api_url": "https://rseng.github.io/software/api/repos/github/AnantharamanLab/vRhyme"}, {"uid": "github/QITI/pySLM2", "html_url": "https://rseng.github.io/software/repository/github/QITI/pySLM2", "api_url": "https://rseng.github.io/software/api/repos/github/QITI/pySLM2"}, {"uid": "github/pysal/spaghetti", "html_url": "https://rseng.github.io/software/repository/github/pysal/spaghetti", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spaghetti"}, {"uid": "github/pysal/pysal", "html_url": "https://rseng.github.io/software/repository/github/pysal/pysal", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/pysal"}, {"uid": "github/pysal/spopt", "html_url": "https://rseng.github.io/software/repository/github/pysal/spopt", "api_url": "https://rseng.github.io/software/api/repos/github/pysal/spopt"}, {"uid": "github/legacysurvey/legacypipe", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/legacypipe", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/legacypipe"}, {"uid": "github/legacysurvey/unwise_psf", "html_url": "https://rseng.github.io/software/repository/github/legacysurvey/unwise_psf", "api_url": "https://rseng.github.io/software/api/repos/github/legacysurvey/unwise_psf"}, {"uid": "github/natir/rustyread", "html_url": "https://rseng.github.io/software/repository/github/natir/rustyread", "api_url": "https://rseng.github.io/software/api/repos/github/natir/rustyread"}, {"uid": "github/natir/vcf2parquet", "html_url": "https://rseng.github.io/software/repository/github/natir/vcf2parquet", "api_url": "https://rseng.github.io/software/api/repos/github/natir/vcf2parquet"}, {"uid": "github/natir/yacrd", "html_url": "https://rseng.github.io/software/repository/github/natir/yacrd", "api_url": "https://rseng.github.io/software/api/repos/github/natir/yacrd"}, {"uid": "github/jfalconbarroso/BAYES-LOSVD", "html_url": "https://rseng.github.io/software/repository/github/jfalconbarroso/BAYES-LOSVD", "api_url": "https://rseng.github.io/software/api/repos/github/jfalconbarroso/BAYES-LOSVD"}, {"uid": "github/cbib/decontaminator", "html_url": "https://rseng.github.io/software/repository/github/cbib/decontaminator", "api_url": "https://rseng.github.io/software/api/repos/github/cbib/decontaminator"}, {"uid": "github/radiosunpy/RadioSunPy", "html_url": "https://rseng.github.io/software/repository/github/radiosunpy/RadioSunPy", "api_url": "https://rseng.github.io/software/api/repos/github/radiosunpy/RadioSunPy"}, {"uid": "github/ABSESpy/ABSESpy", "html_url": "https://rseng.github.io/software/repository/github/ABSESpy/ABSESpy", "api_url": "https://rseng.github.io/software/api/repos/github/ABSESpy/ABSESpy"}, {"uid": "github/bio-tools/biotoolsSum", "html_url": "https://rseng.github.io/software/repository/github/bio-tools/biotoolsSum", "api_url": "https://rseng.github.io/software/api/repos/github/bio-tools/biotoolsSum"}, {"uid": "github/ParBLiSS/FastANI", "html_url": "https://rseng.github.io/software/repository/github/ParBLiSS/FastANI", "api_url": "https://rseng.github.io/software/api/repos/github/ParBLiSS/FastANI"}, {"uid": "github/Theano/Theano", "html_url": "https://rseng.github.io/software/repository/github/Theano/Theano", "api_url": "https://rseng.github.io/software/api/repos/github/Theano/Theano"}, {"uid": "github/signaturescience/skater", "html_url": "https://rseng.github.io/software/repository/github/signaturescience/skater", "api_url": "https://rseng.github.io/software/api/repos/github/signaturescience/skater"}, {"uid": "github/fjprichard/PyAFBF", "html_url": "https://rseng.github.io/software/repository/github/fjprichard/PyAFBF", "api_url": "https://rseng.github.io/software/api/repos/github/fjprichard/PyAFBF"}, {"uid": "github/ALive-research/Slicer-Liver", "html_url": "https://rseng.github.io/software/repository/github/ALive-research/Slicer-Liver", "api_url": "https://rseng.github.io/software/api/repos/github/ALive-research/Slicer-Liver"}, {"uid": "github/JamesKirk11/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/JamesKirk11/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/JamesKirk11/Tiberius"}, {"uid": "github/leraman/Hopla", "html_url": "https://rseng.github.io/software/repository/github/leraman/Hopla", "api_url": "https://rseng.github.io/software/api/repos/github/leraman/Hopla"}, {"uid": "github/ColemanRHarris/mxnorm", "html_url": "https://rseng.github.io/software/repository/github/ColemanRHarris/mxnorm", "api_url": "https://rseng.github.io/software/api/repos/github/ColemanRHarris/mxnorm"}, {"uid": "github/mlares/hearsay", "html_url": "https://rseng.github.io/software/repository/github/mlares/hearsay", "api_url": "https://rseng.github.io/software/api/repos/github/mlares/hearsay"}, {"uid": "github/LindaNab/mecor", "html_url": "https://rseng.github.io/software/repository/github/LindaNab/mecor", "api_url": "https://rseng.github.io/software/api/repos/github/LindaNab/mecor"}, {"uid": "github/KarchinLab/open-cravat-readthedocs", "html_url": "https://rseng.github.io/software/repository/github/KarchinLab/open-cravat-readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/KarchinLab/open-cravat-readthedocs"}, {"uid": "github/subisarkar/JexoSim", "html_url": "https://rseng.github.io/software/repository/github/subisarkar/JexoSim", "api_url": "https://rseng.github.io/software/api/repos/github/subisarkar/JexoSim"}, {"uid": "github/genomehubs/goat-cli", "html_url": "https://rseng.github.io/software/repository/github/genomehubs/goat-cli", "api_url": "https://rseng.github.io/software/api/repos/github/genomehubs/goat-cli"}, {"uid": "github/duffell/Duffell_Gap", "html_url": "https://rseng.github.io/software/repository/github/duffell/Duffell_Gap", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Duffell_Gap"}, {"uid": "github/duffell/RT1D", "html_url": "https://rseng.github.io/software/repository/github/duffell/RT1D", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/RT1D"}, {"uid": "github/duffell/Disco", "html_url": "https://rseng.github.io/software/repository/github/duffell/Disco", "api_url": "https://rseng.github.io/software/api/repos/github/duffell/Disco"}, {"uid": "github/decargroup/pykoop", "html_url": "https://rseng.github.io/software/repository/github/decargroup/pykoop", "api_url": "https://rseng.github.io/software/api/repos/github/decargroup/pykoop"}, {"uid": "github/nipy/heudiconv", "html_url": "https://rseng.github.io/software/repository/github/nipy/heudiconv", "api_url": "https://rseng.github.io/software/api/repos/github/nipy/heudiconv"}, {"uid": "github/shishirdholakia/eclipsoid", "html_url": "https://rseng.github.io/software/repository/github/shishirdholakia/eclipsoid", "api_url": "https://rseng.github.io/software/api/repos/github/shishirdholakia/eclipsoid"}, {"uid": "github/FRED-2/OptiType", "html_url": "https://rseng.github.io/software/repository/github/FRED-2/OptiType", "api_url": "https://rseng.github.io/software/api/repos/github/FRED-2/OptiType"}, {"uid": "github/CyclotronResearchCentre/bidsme", "html_url": "https://rseng.github.io/software/repository/github/CyclotronResearchCentre/bidsme", "api_url": "https://rseng.github.io/software/api/repos/github/CyclotronResearchCentre/bidsme"}, {"uid": "github/elixir-luxembourg/daisy", "html_url": "https://rseng.github.io/software/repository/github/elixir-luxembourg/daisy", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-luxembourg/daisy"}, {"uid": "github/FireflySpectra/firefly_release", "html_url": "https://rseng.github.io/software/repository/github/FireflySpectra/firefly_release", "api_url": "https://rseng.github.io/software/api/repos/github/FireflySpectra/firefly_release"}, {"uid": "github/SeaIce-Math/SubZero", "html_url": "https://rseng.github.io/software/repository/github/SeaIce-Math/SubZero", "api_url": "https://rseng.github.io/software/api/repos/github/SeaIce-Math/SubZero"}, {"uid": "github/quatrope/ProperImage", "html_url": "https://rseng.github.io/software/repository/github/quatrope/ProperImage", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/ProperImage"}, {"uid": "github/quatrope/feets", "html_url": "https://rseng.github.io/software/repository/github/quatrope/feets", "api_url": "https://rseng.github.io/software/api/repos/github/quatrope/feets"}, {"uid": "github/msolpera/pyUPMASK", "html_url": "https://rseng.github.io/software/repository/github/msolpera/pyUPMASK", "api_url": "https://rseng.github.io/software/api/repos/github/msolpera/pyUPMASK"}, {"uid": "github/CRPropa/CRPropa2", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa2", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa2"}, {"uid": "github/CRPropa/CRPropa3", "html_url": "https://rseng.github.io/software/repository/github/CRPropa/CRPropa3", "api_url": "https://rseng.github.io/software/api/repos/github/CRPropa/CRPropa3"}, {"uid": "github/FraunhoferIWES/foxes", "html_url": "https://rseng.github.io/software/repository/github/FraunhoferIWES/foxes", "api_url": "https://rseng.github.io/software/api/repos/github/FraunhoferIWES/foxes"}, {"uid": "github/berczik/phi-GPU-mole", "html_url": "https://rseng.github.io/software/repository/github/berczik/phi-GPU-mole", "api_url": "https://rseng.github.io/software/api/repos/github/berczik/phi-GPU-mole"}, {"uid": "github/VU-BEAM-Lab/GENRE", "html_url": "https://rseng.github.io/software/repository/github/VU-BEAM-Lab/GENRE", "api_url": "https://rseng.github.io/software/api/repos/github/VU-BEAM-Lab/GENRE"}, {"uid": "github/light-curve/light-curve", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve"}, {"uid": "github/light-curve/light-curve-python", "html_url": "https://rseng.github.io/software/repository/github/light-curve/light-curve-python", "api_url": "https://rseng.github.io/software/api/repos/github/light-curve/light-curve-python"}, {"uid": "github/OSSOS/SurveySimulator", "html_url": "https://rseng.github.io/software/repository/github/OSSOS/SurveySimulator", "api_url": "https://rseng.github.io/software/api/repos/github/OSSOS/SurveySimulator"}, {"uid": "github/jbattat/pep_core", "html_url": "https://rseng.github.io/software/repository/github/jbattat/pep_core", "api_url": "https://rseng.github.io/software/api/repos/github/jbattat/pep_core"}, {"uid": "github/rizkg/BBHash", "html_url": "https://rseng.github.io/software/repository/github/rizkg/BBHash", "api_url": "https://rseng.github.io/software/api/repos/github/rizkg/BBHash"}, {"uid": "github/single-cell-genetics/cellsnp-lite", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/cellsnp-lite", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/cellsnp-lite"}, {"uid": "github/single-cell-genetics/vireo", "html_url": "https://rseng.github.io/software/repository/github/single-cell-genetics/vireo", "api_url": "https://rseng.github.io/software/api/repos/github/single-cell-genetics/vireo"}, {"uid": "github/zarr-developers/zarr-python", "html_url": "https://rseng.github.io/software/repository/github/zarr-developers/zarr-python", "api_url": "https://rseng.github.io/software/api/repos/github/zarr-developers/zarr-python"}, {"uid": "github/ryanvarley/exodata", "html_url": "https://rseng.github.io/software/repository/github/ryanvarley/exodata", "api_url": "https://rseng.github.io/software/api/repos/github/ryanvarley/exodata"}, {"uid": "github/hera-team/librarian", "html_url": "https://rseng.github.io/software/repository/github/hera-team/librarian", "api_url": "https://rseng.github.io/software/api/repos/github/hera-team/librarian"}, {"uid": "github/dalya/WeirdestGalaxies", "html_url": "https://rseng.github.io/software/repository/github/dalya/WeirdestGalaxies", "api_url": "https://rseng.github.io/software/api/repos/github/dalya/WeirdestGalaxies"}, {"uid": "github/SimonPfeifer/cows", "html_url": "https://rseng.github.io/software/repository/github/SimonPfeifer/cows", "api_url": "https://rseng.github.io/software/api/repos/github/SimonPfeifer/cows"}, {"uid": "github/OBrink/RanDepict", "html_url": "https://rseng.github.io/software/repository/github/OBrink/RanDepict", "api_url": "https://rseng.github.io/software/api/repos/github/OBrink/RanDepict"}, {"uid": "github/jodyphelan/TBProfiler", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/TBProfiler", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/TBProfiler"}, {"uid": "github/jodyphelan/tb-ml", "html_url": "https://rseng.github.io/software/repository/github/jodyphelan/tb-ml", "api_url": "https://rseng.github.io/software/api/repos/github/jodyphelan/tb-ml"}, {"uid": "github/mjuric/galfast", "html_url": "https://rseng.github.io/software/repository/github/mjuric/galfast", "api_url": "https://rseng.github.io/software/api/repos/github/mjuric/galfast"}, {"uid": "github/Multiscale-Genomics/VRE", "html_url": "https://rseng.github.io/software/repository/github/Multiscale-Genomics/VRE", "api_url": "https://rseng.github.io/software/api/repos/github/Multiscale-Genomics/VRE"}, {"uid": "github/WelbornGroup/ELECTRIC", "html_url": "https://rseng.github.io/software/repository/github/WelbornGroup/ELECTRIC", "api_url": "https://rseng.github.io/software/api/repos/github/WelbornGroup/ELECTRIC"}, {"uid": "github/mgieles/limepy", "html_url": "https://rseng.github.io/software/repository/github/mgieles/limepy", "api_url": "https://rseng.github.io/software/api/repos/github/mgieles/limepy"}, {"uid": "github/mlower/rmnest", "html_url": "https://rseng.github.io/software/repository/github/mlower/rmnest", "api_url": "https://rseng.github.io/software/api/repos/github/mlower/rmnest"}, {"uid": "github/florent-leclercq/pyselfi", "html_url": "https://rseng.github.io/software/repository/github/florent-leclercq/pyselfi", "api_url": "https://rseng.github.io/software/api/repos/github/florent-leclercq/pyselfi"}, {"uid": "github/recipy/recipy", "html_url": "https://rseng.github.io/software/repository/github/recipy/recipy", "api_url": "https://rseng.github.io/software/api/repos/github/recipy/recipy"}, {"uid": "github/xinglunju/pyAmor", "html_url": "https://rseng.github.io/software/repository/github/xinglunju/pyAmor", "api_url": "https://rseng.github.io/software/api/repos/github/xinglunju/pyAmor"}, {"uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "html_url": "https://rseng.github.io/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", "api_url": "https://rseng.github.io/software/api/repos/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark"}, {"uid": "github/ronshnapp/MyPTV", "html_url": "https://rseng.github.io/software/repository/github/ronshnapp/MyPTV", "api_url": "https://rseng.github.io/software/api/repos/github/ronshnapp/MyPTV"}, {"uid": "github/CGATOxford/UMI-tools", "html_url": "https://rseng.github.io/software/repository/github/CGATOxford/UMI-tools", "api_url": "https://rseng.github.io/software/api/repos/github/CGATOxford/UMI-tools"}, {"uid": "github/RabadanLab/arcasHLA", "html_url": "https://rseng.github.io/software/repository/github/RabadanLab/arcasHLA", "api_url": "https://rseng.github.io/software/api/repos/github/RabadanLab/arcasHLA"}, {"uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "html_url": "https://rseng.github.io/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", "api_url": "https://rseng.github.io/software/api/repos/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier"}, {"uid": "github/PopMedNet-Team/popmednet", "html_url": "https://rseng.github.io/software/repository/github/PopMedNet-Team/popmednet", "api_url": "https://rseng.github.io/software/api/repos/github/PopMedNet-Team/popmednet"}, {"uid": "github/fjankowsk/fitpdf", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/fitpdf", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/fitpdf"}, {"uid": "github/fjankowsk/scatfit", "html_url": "https://rseng.github.io/software/repository/github/fjankowsk/scatfit", "api_url": "https://rseng.github.io/software/api/repos/github/fjankowsk/scatfit"}, {"uid": "github/matteozennaro/reps", "html_url": "https://rseng.github.io/software/repository/github/matteozennaro/reps", "api_url": "https://rseng.github.io/software/api/repos/github/matteozennaro/reps"}, {"uid": "github/jharno/cubep3m", "html_url": "https://rseng.github.io/software/repository/github/jharno/cubep3m", "api_url": "https://rseng.github.io/software/api/repos/github/jharno/cubep3m"}, {"uid": "github/PCMSolver/pcmsolver", "html_url": "https://rseng.github.io/software/repository/github/PCMSolver/pcmsolver", "api_url": "https://rseng.github.io/software/api/repos/github/PCMSolver/pcmsolver"}, {"uid": "github/dgrin1/axionCAMB", "html_url": "https://rseng.github.io/software/repository/github/dgrin1/axionCAMB", "api_url": "https://rseng.github.io/software/api/repos/github/dgrin1/axionCAMB"}, {"uid": "github/jrenaud90/TidalPy", "html_url": "https://rseng.github.io/software/repository/github/jrenaud90/TidalPy", "api_url": "https://rseng.github.io/software/api/repos/github/jrenaud90/TidalPy"}, {"uid": "github/liamedeiros/ehtplot", "html_url": "https://rseng.github.io/software/repository/github/liamedeiros/ehtplot", "api_url": "https://rseng.github.io/software/api/repos/github/liamedeiros/ehtplot"}, {"uid": "github/milicolazo/Pyedra", "html_url": "https://rseng.github.io/software/repository/github/milicolazo/Pyedra", "api_url": "https://rseng.github.io/software/api/repos/github/milicolazo/Pyedra"}, {"uid": "github/musevlt/origin", "html_url": "https://rseng.github.io/software/repository/github/musevlt/origin", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/origin"}, {"uid": "github/musevlt/muse-psfr", "html_url": "https://rseng.github.io/software/repository/github/musevlt/muse-psfr", "api_url": "https://rseng.github.io/software/api/repos/github/musevlt/muse-psfr"}, {"uid": "github/mikejohnson51/AHGestimation", "html_url": "https://rseng.github.io/software/repository/github/mikejohnson51/AHGestimation", "api_url": "https://rseng.github.io/software/api/repos/github/mikejohnson51/AHGestimation"}, {"uid": "github/zooniverse/starpy", "html_url": "https://rseng.github.io/software/repository/github/zooniverse/starpy", "api_url": "https://rseng.github.io/software/api/repos/github/zooniverse/starpy"}, {"uid": "github/jianhuupenn/SpaGCN", "html_url": "https://rseng.github.io/software/repository/github/jianhuupenn/SpaGCN", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuupenn/SpaGCN"}, {"uid": "github/mtlam/PyPulse", "html_url": "https://rseng.github.io/software/repository/github/mtlam/PyPulse", "api_url": "https://rseng.github.io/software/api/repos/github/mtlam/PyPulse"}, {"uid": "github/jan-orkisz/colume", "html_url": "https://rseng.github.io/software/repository/github/jan-orkisz/colume", "api_url": "https://rseng.github.io/software/api/repos/github/jan-orkisz/colume"}, {"uid": "github/odlomax/spamcart-dev", "html_url": "https://rseng.github.io/software/repository/github/odlomax/spamcart-dev", "api_url": "https://rseng.github.io/software/api/repos/github/odlomax/spamcart-dev"}, {"uid": "github/IAMconsortium/pyam", "html_url": "https://rseng.github.io/software/repository/github/IAMconsortium/pyam", "api_url": "https://rseng.github.io/software/api/repos/github/IAMconsortium/pyam"}, {"uid": "github/danielenricocahall/elephas", "html_url": "https://rseng.github.io/software/repository/github/danielenricocahall/elephas", "api_url": "https://rseng.github.io/software/api/repos/github/danielenricocahall/elephas"}, {"uid": "github/GATB/bcalm", "html_url": "https://rseng.github.io/software/repository/github/GATB/bcalm", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/bcalm"}, {"uid": "github/GATB/gatb-core", "html_url": "https://rseng.github.io/software/repository/github/GATB/gatb-core", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/gatb-core"}, {"uid": "github/GATB/simka", "html_url": "https://rseng.github.io/software/repository/github/GATB/simka", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/simka"}, {"uid": "github/GATB/MindTheGap", "html_url": "https://rseng.github.io/software/repository/github/GATB/MindTheGap", "api_url": "https://rseng.github.io/software/api/repos/github/GATB/MindTheGap"}, {"uid": "github/Robaina/Pynteny", "html_url": "https://rseng.github.io/software/repository/github/Robaina/Pynteny", "api_url": "https://rseng.github.io/software/api/repos/github/Robaina/Pynteny"}, {"uid": "github/connor-makowski/type_enforced", "html_url": "https://rseng.github.io/software/repository/github/connor-makowski/type_enforced", "api_url": "https://rseng.github.io/software/api/repos/github/connor-makowski/type_enforced"}, {"uid": "github/askap-craco/CELEBI", "html_url": "https://rseng.github.io/software/repository/github/askap-craco/CELEBI", "api_url": "https://rseng.github.io/software/api/repos/github/askap-craco/CELEBI"}, {"uid": "github/taxprofiler/taxpasta", "html_url": "https://rseng.github.io/software/repository/github/taxprofiler/taxpasta", "api_url": "https://rseng.github.io/software/api/repos/github/taxprofiler/taxpasta"}, {"uid": "github/ShubhadeepSadhukhan1993/fastSF", "html_url": "https://rseng.github.io/software/repository/github/ShubhadeepSadhukhan1993/fastSF", "api_url": "https://rseng.github.io/software/api/repos/github/ShubhadeepSadhukhan1993/fastSF"}, {"uid": "github/lazear/sage", "html_url": "https://rseng.github.io/software/repository/github/lazear/sage", "api_url": "https://rseng.github.io/software/api/repos/github/lazear/sage"}, {"uid": "github/matta-research-group/SwiftPol", "html_url": "https://rseng.github.io/software/repository/github/matta-research-group/SwiftPol", "api_url": "https://rseng.github.io/software/api/repos/github/matta-research-group/SwiftPol"}, {"uid": "github/tpapp/MCMCDiagnostics.jl", "html_url": "https://rseng.github.io/software/repository/github/tpapp/MCMCDiagnostics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/tpapp/MCMCDiagnostics.jl"}, {"uid": "github/CosmoStat/score", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/score", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/score"}, {"uid": "github/CosmoStat/shapepipe", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/shapepipe", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/shapepipe"}, {"uid": "github/CosmoStat/Glimpse", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/Glimpse", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/Glimpse"}, {"uid": "github/CosmoStat/mccd", "html_url": "https://rseng.github.io/software/repository/github/CosmoStat/mccd", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoStat/mccd"}, {"uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", "html_url": "https://rseng.github.io/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", "api_url": "https://rseng.github.io/software/api/repos/github/uaf-arctic-eco-modeling/dvm-dos-tem"}, {"uid": "github/DrDaveShaw/INCHEM-Py", "html_url": "https://rseng.github.io/software/repository/github/DrDaveShaw/INCHEM-Py", "api_url": "https://rseng.github.io/software/api/repos/github/DrDaveShaw/INCHEM-Py"}, {"uid": "github/stinefm/relsad", "html_url": "https://rseng.github.io/software/repository/github/stinefm/relsad", "api_url": "https://rseng.github.io/software/api/repos/github/stinefm/relsad"}, {"uid": "github/MIAnalyzer/MIA", "html_url": "https://rseng.github.io/software/repository/github/MIAnalyzer/MIA", "api_url": "https://rseng.github.io/software/api/repos/github/MIAnalyzer/MIA"}, {"uid": "github/IPIS-XieLei/CNTSeg", "html_url": "https://rseng.github.io/software/repository/github/IPIS-XieLei/CNTSeg", "api_url": "https://rseng.github.io/software/api/repos/github/IPIS-XieLei/CNTSeg"}, {"uid": "github/fenderglass/Flye", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Flye"}, {"uid": "github/fenderglass/Ragout", "html_url": "https://rseng.github.io/software/repository/github/fenderglass/Ragout", "api_url": "https://rseng.github.io/software/api/repos/github/fenderglass/Ragout"}, {"uid": "github/ModellingWebLab/chaste-codegen", "html_url": "https://rseng.github.io/software/repository/github/ModellingWebLab/chaste-codegen", "api_url": "https://rseng.github.io/software/api/repos/github/ModellingWebLab/chaste-codegen"}, {"uid": "github/editeodoro/Bbarolo", "html_url": "https://rseng.github.io/software/repository/github/editeodoro/Bbarolo", "api_url": "https://rseng.github.io/software/api/repos/github/editeodoro/Bbarolo"}, {"uid": "github/studla/RYUTO", "html_url": "https://rseng.github.io/software/repository/github/studla/RYUTO", "api_url": "https://rseng.github.io/software/api/repos/github/studla/RYUTO"}, {"uid": "github/ltlancas/walter", "html_url": "https://rseng.github.io/software/repository/github/ltlancas/walter", "api_url": "https://rseng.github.io/software/api/repos/github/ltlancas/walter"}, {"uid": "github/CosmoTool/ECLIPSE", "html_url": "https://rseng.github.io/software/repository/github/CosmoTool/ECLIPSE", "api_url": "https://rseng.github.io/software/api/repos/github/CosmoTool/ECLIPSE"}, {"uid": "github/BrownDwarf/gollum", "html_url": "https://rseng.github.io/software/repository/github/BrownDwarf/gollum", "api_url": "https://rseng.github.io/software/api/repos/github/BrownDwarf/gollum"}, {"uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", "html_url": "https://rseng.github.io/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", "api_url": "https://rseng.github.io/software/api/repos/github/VIRAC-SPACE/Automatic_Correlation_information_system"}, {"uid": "github/baharmon/r.earthworks", "html_url": "https://rseng.github.io/software/repository/github/baharmon/r.earthworks", "api_url": "https://rseng.github.io/software/api/repos/github/baharmon/r.earthworks"}, {"uid": "github/nh13/DWGSIM", "html_url": "https://rseng.github.io/software/repository/github/nh13/DWGSIM", "api_url": "https://rseng.github.io/software/api/repos/github/nh13/DWGSIM"}, {"uid": "github/drgmk/vis-r", "html_url": "https://rseng.github.io/software/repository/github/drgmk/vis-r", "api_url": "https://rseng.github.io/software/api/repos/github/drgmk/vis-r"}, {"uid": "github/McPHAC/McPHAC", "html_url": "https://rseng.github.io/software/repository/github/McPHAC/McPHAC", "api_url": "https://rseng.github.io/software/api/repos/github/McPHAC/McPHAC"}, {"uid": "github/ckarako/RRATtrap", "html_url": "https://rseng.github.io/software/repository/github/ckarako/RRATtrap", "api_url": "https://rseng.github.io/software/api/repos/github/ckarako/RRATtrap"}, {"uid": "github/songningqiang/CosmoLED", "html_url": "https://rseng.github.io/software/repository/github/songningqiang/CosmoLED", "api_url": "https://rseng.github.io/software/api/repos/github/songningqiang/CosmoLED"}, {"uid": "github/furrer-lab/abn", "html_url": "https://rseng.github.io/software/repository/github/furrer-lab/abn", "api_url": "https://rseng.github.io/software/api/repos/github/furrer-lab/abn"}, {"uid": "github/diCenzo-GC/Tn-Core-webserver", "html_url": "https://rseng.github.io/software/repository/github/diCenzo-GC/Tn-Core-webserver", "api_url": "https://rseng.github.io/software/api/repos/github/diCenzo-GC/Tn-Core-webserver"}, {"uid": "github/ntcockroft/STarFish", "html_url": "https://rseng.github.io/software/repository/github/ntcockroft/STarFish", "api_url": "https://rseng.github.io/software/api/repos/github/ntcockroft/STarFish"}, {"uid": "github/CheerfulUser/starkiller", "html_url": "https://rseng.github.io/software/repository/github/CheerfulUser/starkiller", "api_url": "https://rseng.github.io/software/api/repos/github/CheerfulUser/starkiller"}, {"uid": "github/zachetienne/nrpytutorial", "html_url": "https://rseng.github.io/software/repository/github/zachetienne/nrpytutorial", "api_url": "https://rseng.github.io/software/api/repos/github/zachetienne/nrpytutorial"}, {"uid": "github/DynaSlum/satsense", "html_url": "https://rseng.github.io/software/repository/github/DynaSlum/satsense", "api_url": "https://rseng.github.io/software/api/repos/github/DynaSlum/satsense"}, {"uid": "github/dazhwu/pydynpd", "html_url": "https://rseng.github.io/software/repository/github/dazhwu/pydynpd", "api_url": "https://rseng.github.io/software/api/repos/github/dazhwu/pydynpd"}, {"uid": "github/mpip/pfft", "html_url": "https://rseng.github.io/software/repository/github/mpip/pfft", "api_url": "https://rseng.github.io/software/api/repos/github/mpip/pfft"}, {"uid": "github/mindearth/mobilkit", "html_url": "https://rseng.github.io/software/repository/github/mindearth/mobilkit", "api_url": "https://rseng.github.io/software/api/repos/github/mindearth/mobilkit"}, {"uid": "github/mncrowe/QGDipoles.jl", "html_url": "https://rseng.github.io/software/repository/github/mncrowe/QGDipoles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mncrowe/QGDipoles.jl"}, {"uid": "github/AndrewGibbs/PathFinder", "html_url": "https://rseng.github.io/software/repository/github/AndrewGibbs/PathFinder", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewGibbs/PathFinder"}, {"uid": "github/hartwigmedical/hmftools", "html_url": "https://rseng.github.io/software/repository/github/hartwigmedical/hmftools", "api_url": "https://rseng.github.io/software/api/repos/github/hartwigmedical/hmftools"}, {"uid": "github/RemoteSensingTools/vSmartMOM.jl", "html_url": "https://rseng.github.io/software/repository/github/RemoteSensingTools/vSmartMOM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/RemoteSensingTools/vSmartMOM.jl"}, {"uid": "github/linsalrob/PhiSpy", "html_url": "https://rseng.github.io/software/repository/github/linsalrob/PhiSpy", "api_url": "https://rseng.github.io/software/api/repos/github/linsalrob/PhiSpy"}, {"uid": "github/qurit/rt-utils", "html_url": "https://rseng.github.io/software/repository/github/qurit/rt-utils", "api_url": "https://rseng.github.io/software/api/repos/github/qurit/rt-utils"}, {"uid": "github/a-slide/pycoQC", "html_url": "https://rseng.github.io/software/repository/github/a-slide/pycoQC", "api_url": "https://rseng.github.io/software/api/repos/github/a-slide/pycoQC"}, {"uid": "github/davidebolo1993/TRiCoLOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/TRiCoLOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/TRiCoLOR"}, {"uid": "github/davidebolo1993/VISOR", "html_url": "https://rseng.github.io/software/repository/github/davidebolo1993/VISOR", "api_url": "https://rseng.github.io/software/api/repos/github/davidebolo1993/VISOR"}, {"uid": "github/cosmo-sims/DISCO-DJ", "html_url": "https://rseng.github.io/software/repository/github/cosmo-sims/DISCO-DJ", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-sims/DISCO-DJ"}, {"uid": "github/slzarate/parliament2", "html_url": "https://rseng.github.io/software/repository/github/slzarate/parliament2", "api_url": "https://rseng.github.io/software/api/repos/github/slzarate/parliament2"}, {"uid": "github/UM-Bridge/umbridge", "html_url": "https://rseng.github.io/software/repository/github/UM-Bridge/umbridge", "api_url": "https://rseng.github.io/software/api/repos/github/UM-Bridge/umbridge"}, {"uid": "github/chemprop/chemprop_benchmark", "html_url": "https://rseng.github.io/software/repository/github/chemprop/chemprop_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/chemprop/chemprop_benchmark"}, {"uid": "github/bzrudski/vectorose", "html_url": "https://rseng.github.io/software/repository/github/bzrudski/vectorose", "api_url": "https://rseng.github.io/software/api/repos/github/bzrudski/vectorose"}, {"uid": "github/FRBs/FRB", "html_url": "https://rseng.github.io/software/repository/github/FRBs/FRB", "api_url": "https://rseng.github.io/software/api/repos/github/FRBs/FRB"}, {"uid": "github/Mec-iS/arrowspace-rs", "html_url": "https://rseng.github.io/software/repository/github/Mec-iS/arrowspace-rs", "api_url": "https://rseng.github.io/software/api/repos/github/Mec-iS/arrowspace-rs"}, {"uid": "github/shilpagarg/WHdenovo", "html_url": "https://rseng.github.io/software/repository/github/shilpagarg/WHdenovo", "api_url": "https://rseng.github.io/software/api/repos/github/shilpagarg/WHdenovo"}, {"uid": "github/spinicist/riesling", "html_url": "https://rseng.github.io/software/repository/github/spinicist/riesling", "api_url": "https://rseng.github.io/software/api/repos/github/spinicist/riesling"}, {"uid": "github/JetBrains-Research/spbla", "html_url": "https://rseng.github.io/software/repository/github/JetBrains-Research/spbla", "api_url": "https://rseng.github.io/software/api/repos/github/JetBrains-Research/spbla"}, {"uid": "github/elsoroka/Satisfiability.jl", "html_url": "https://rseng.github.io/software/repository/github/elsoroka/Satisfiability.jl", "api_url": "https://rseng.github.io/software/api/repos/github/elsoroka/Satisfiability.jl"}, {"uid": "github/akcochrane/TEfits", "html_url": "https://rseng.github.io/software/repository/github/akcochrane/TEfits", "api_url": "https://rseng.github.io/software/api/repos/github/akcochrane/TEfits"}, {"uid": "github/pscicluna/precision", "html_url": "https://rseng.github.io/software/repository/github/pscicluna/precision", "api_url": "https://rseng.github.io/software/api/repos/github/pscicluna/precision"}, {"uid": "github/CHES2023/PyMsOfa", "html_url": "https://rseng.github.io/software/repository/github/CHES2023/PyMsOfa", "api_url": "https://rseng.github.io/software/api/repos/github/CHES2023/PyMsOfa"}, {"uid": "github/AaronDavidSchneider/chemcomp", "html_url": "https://rseng.github.io/software/repository/github/AaronDavidSchneider/chemcomp", "api_url": "https://rseng.github.io/software/api/repos/github/AaronDavidSchneider/chemcomp"}, {"uid": "github/jrkerns/pylinac", "html_url": "https://rseng.github.io/software/repository/github/jrkerns/pylinac", "api_url": "https://rseng.github.io/software/api/repos/github/jrkerns/pylinac"}, {"uid": "github/KorfLab/SNAP", "html_url": "https://rseng.github.io/software/repository/github/KorfLab/SNAP", "api_url": "https://rseng.github.io/software/api/repos/github/KorfLab/SNAP"}, {"uid": "github/wcoulton/CompressedFisher", "html_url": "https://rseng.github.io/software/repository/github/wcoulton/CompressedFisher", "api_url": "https://rseng.github.io/software/api/repos/github/wcoulton/CompressedFisher"}, {"uid": "github/konfound-project/konfound", "html_url": "https://rseng.github.io/software/repository/github/konfound-project/konfound", "api_url": "https://rseng.github.io/software/api/repos/github/konfound-project/konfound"}, {"uid": "github/jiujiezz/tsnad", "html_url": "https://rseng.github.io/software/repository/github/jiujiezz/tsnad", "api_url": "https://rseng.github.io/software/api/repos/github/jiujiezz/tsnad"}, {"uid": "github/sgshulman/DGEM", "html_url": "https://rseng.github.io/software/repository/github/sgshulman/DGEM", "api_url": "https://rseng.github.io/software/api/repos/github/sgshulman/DGEM"}, {"uid": "github/hombit/freddi", "html_url": "https://rseng.github.io/software/repository/github/hombit/freddi", "api_url": "https://rseng.github.io/software/api/repos/github/hombit/freddi"}, {"uid": "github/eggplantbren/RJObject", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RJObject", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RJObject"}, {"uid": "github/eggplantbren/DNest3", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest3", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest3"}, {"uid": "github/eggplantbren/Exoplanet", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/Exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/Exoplanet"}, {"uid": "github/eggplantbren/RMHB", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/RMHB", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/RMHB"}, {"uid": "github/eggplantbren/DNest4", "html_url": "https://rseng.github.io/software/repository/github/eggplantbren/DNest4", "api_url": "https://rseng.github.io/software/api/repos/github/eggplantbren/DNest4"}, {"uid": "github/yanliang-astro/aestra", "html_url": "https://rseng.github.io/software/repository/github/yanliang-astro/aestra", "api_url": "https://rseng.github.io/software/api/repos/github/yanliang-astro/aestra"}, {"uid": "github/mathopt/DynamicOED.jl", "html_url": "https://rseng.github.io/software/repository/github/mathopt/DynamicOED.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mathopt/DynamicOED.jl"}, {"uid": "github/pezmaster31/bamtools", "html_url": "https://rseng.github.io/software/repository/github/pezmaster31/bamtools", "api_url": "https://rseng.github.io/software/api/repos/github/pezmaster31/bamtools"}, {"uid": "github/kutaslab/fitgrid", "html_url": "https://rseng.github.io/software/repository/github/kutaslab/fitgrid", "api_url": "https://rseng.github.io/software/api/repos/github/kutaslab/fitgrid"}, {"uid": "github/gear-genomics/dicey", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/dicey", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/dicey"}, {"uid": "github/gear-genomics/tracy", "html_url": "https://rseng.github.io/software/repository/github/gear-genomics/tracy", "api_url": "https://rseng.github.io/software/api/repos/github/gear-genomics/tracy"}, {"uid": "github/apaolillo/pythainer", "html_url": "https://rseng.github.io/software/repository/github/apaolillo/pythainer", "api_url": "https://rseng.github.io/software/api/repos/github/apaolillo/pythainer"}, {"uid": "github/gsuissa/hardCORE", "html_url": "https://rseng.github.io/software/repository/github/gsuissa/hardCORE", "api_url": "https://rseng.github.io/software/api/repos/github/gsuissa/hardCORE"}, {"uid": "github/DrJieZheng/meanoffset", "html_url": "https://rseng.github.io/software/repository/github/DrJieZheng/meanoffset", "api_url": "https://rseng.github.io/software/api/repos/github/DrJieZheng/meanoffset"}, {"uid": "github/LTLA/gesel.js", "html_url": "https://rseng.github.io/software/repository/github/LTLA/gesel.js", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/gesel.js"}, {"uid": "github/LTLA/basilisk", "html_url": "https://rseng.github.io/software/repository/github/LTLA/basilisk", "api_url": "https://rseng.github.io/software/api/repos/github/LTLA/basilisk"}, {"uid": "github/PyTorchLightning/metrics", "html_url": "https://rseng.github.io/software/repository/github/PyTorchLightning/metrics", "api_url": "https://rseng.github.io/software/api/repos/github/PyTorchLightning/metrics"}, {"uid": "github/SebastianBocquet/pygtc", "html_url": "https://rseng.github.io/software/repository/github/SebastianBocquet/pygtc", "api_url": "https://rseng.github.io/software/api/repos/github/SebastianBocquet/pygtc"}, {"uid": "github/marseille-proteomique/DIAgui", "html_url": "https://rseng.github.io/software/repository/github/marseille-proteomique/DIAgui", "api_url": "https://rseng.github.io/software/api/repos/github/marseille-proteomique/DIAgui"}, {"uid": "github/stamatak/AxPcoords.dist", "html_url": "https://rseng.github.io/software/repository/github/stamatak/AxPcoords.dist", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/AxPcoords.dist"}, {"uid": "github/stamatak/ExaML", "html_url": "https://rseng.github.io/software/repository/github/stamatak/ExaML", "api_url": "https://rseng.github.io/software/api/repos/github/stamatak/ExaML"}, {"uid": "github/HofstadterTools/HofstadterTools", "html_url": "https://rseng.github.io/software/repository/github/HofstadterTools/HofstadterTools", "api_url": "https://rseng.github.io/software/api/repos/github/HofstadterTools/HofstadterTools"}, {"uid": "github/PabloMSanAla/fabada", "html_url": "https://rseng.github.io/software/repository/github/PabloMSanAla/fabada", "api_url": "https://rseng.github.io/software/api/repos/github/PabloMSanAla/fabada"}, {"uid": "github/ejeschke/ginga", "html_url": "https://rseng.github.io/software/repository/github/ejeschke/ginga", "api_url": "https://rseng.github.io/software/api/repos/github/ejeschke/ginga"}, {"uid": "github/hishamhm/htop", "html_url": "https://rseng.github.io/software/repository/github/hishamhm/htop", "api_url": "https://rseng.github.io/software/api/repos/github/hishamhm/htop"}, {"uid": "github/UrbanRuralSystems/ur-scape", "html_url": "https://rseng.github.io/software/repository/github/UrbanRuralSystems/ur-scape", "api_url": "https://rseng.github.io/software/api/repos/github/UrbanRuralSystems/ur-scape"}, {"uid": "github/eabaron/synow", "html_url": "https://rseng.github.io/software/repository/github/eabaron/synow", "api_url": "https://rseng.github.io/software/api/repos/github/eabaron/synow"}, {"uid": "github/citiususc/veryfasttree", "html_url": "https://rseng.github.io/software/repository/github/citiususc/veryfasttree", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/veryfasttree"}, {"uid": "github/citiususc/BigSeqKit", "html_url": "https://rseng.github.io/software/repository/github/citiususc/BigSeqKit", "api_url": "https://rseng.github.io/software/api/repos/github/citiususc/BigSeqKit"}, {"uid": "github/BradhamLab/icat", "html_url": "https://rseng.github.io/software/repository/github/BradhamLab/icat", "api_url": "https://rseng.github.io/software/api/repos/github/BradhamLab/icat"}, {"uid": "github/ggmichael/craterstats", "html_url": "https://rseng.github.io/software/repository/github/ggmichael/craterstats", "api_url": "https://rseng.github.io/software/api/repos/github/ggmichael/craterstats"}, {"uid": "github/migp11/pyfastcore", "html_url": "https://rseng.github.io/software/repository/github/migp11/pyfastcore", "api_url": "https://rseng.github.io/software/api/repos/github/migp11/pyfastcore"}, {"uid": "github/HLasse/TextDescriptives", "html_url": "https://rseng.github.io/software/repository/github/HLasse/TextDescriptives", "api_url": "https://rseng.github.io/software/api/repos/github/HLasse/TextDescriptives"}, {"uid": "github/zblz/naima", "html_url": "https://rseng.github.io/software/repository/github/zblz/naima", "api_url": "https://rseng.github.io/software/api/repos/github/zblz/naima"}, {"uid": "github/cogent3/cogent3", "html_url": "https://rseng.github.io/software/repository/github/cogent3/cogent3", "api_url": "https://rseng.github.io/software/api/repos/github/cogent3/cogent3"}, {"uid": "github/esoPanda/FTbg", "html_url": "https://rseng.github.io/software/repository/github/esoPanda/FTbg", "api_url": "https://rseng.github.io/software/api/repos/github/esoPanda/FTbg"}, {"uid": "github/ethz-randomwalk/polytopewalk", "html_url": "https://rseng.github.io/software/repository/github/ethz-randomwalk/polytopewalk", "api_url": "https://rseng.github.io/software/api/repos/github/ethz-randomwalk/polytopewalk"}, {"uid": "github/Julian/jsonschema", "html_url": "https://rseng.github.io/software/repository/github/Julian/jsonschema", "api_url": "https://rseng.github.io/software/api/repos/github/Julian/jsonschema"}, {"uid": "github/jbytecode/LinRegOutliers", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/LinRegOutliers", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/LinRegOutliers"}, {"uid": "github/jbytecode/JMcDM", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/JMcDM", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/JMcDM"}, {"uid": "github/jbytecode/OperationsResearchModels.jl", "html_url": "https://rseng.github.io/software/repository/github/jbytecode/OperationsResearchModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jbytecode/OperationsResearchModels.jl"}, {"uid": "github/chemfiles/chemfiles", "html_url": "https://rseng.github.io/software/repository/github/chemfiles/chemfiles", "api_url": "https://rseng.github.io/software/api/repos/github/chemfiles/chemfiles"}, {"uid": "github/SatelliteShorelines/CoastSeg", "html_url": "https://rseng.github.io/software/repository/github/SatelliteShorelines/CoastSeg", "api_url": "https://rseng.github.io/software/api/repos/github/SatelliteShorelines/CoastSeg"}, {"uid": "github/votca/xtp", "html_url": "https://rseng.github.io/software/repository/github/votca/xtp", "api_url": "https://rseng.github.io/software/api/repos/github/votca/xtp"}, {"uid": "github/phipsonlab/propeller-paper-analysis", "html_url": "https://rseng.github.io/software/repository/github/phipsonlab/propeller-paper-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phipsonlab/propeller-paper-analysis"}, {"uid": "github/brentp/somalier", "html_url": "https://rseng.github.io/software/repository/github/brentp/somalier", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/somalier"}, {"uid": "github/brentp/goleft", "html_url": "https://rseng.github.io/software/repository/github/brentp/goleft", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/goleft"}, {"uid": "github/brentp/kexpr-nim", "html_url": "https://rseng.github.io/software/repository/github/brentp/kexpr-nim", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/kexpr-nim"}, {"uid": "github/brentp/cigar", "html_url": "https://rseng.github.io/software/repository/github/brentp/cigar", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cigar"}, {"uid": "github/brentp/gsort", "html_url": "https://rseng.github.io/software/repository/github/brentp/gsort", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/gsort"}, {"uid": "github/brentp/hts-nim-tools", "html_url": "https://rseng.github.io/software/repository/github/brentp/hts-nim-tools", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/hts-nim-tools"}, {"uid": "github/brentp/vcfanno", "html_url": "https://rseng.github.io/software/repository/github/brentp/vcfanno", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/vcfanno"}, {"uid": "github/brentp/smoove", "html_url": "https://rseng.github.io/software/repository/github/brentp/smoove", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/smoove"}, {"uid": "github/brentp/geneimpacts", "html_url": "https://rseng.github.io/software/repository/github/brentp/geneimpacts", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/geneimpacts"}, {"uid": "github/brentp/cyvcf2", "html_url": "https://rseng.github.io/software/repository/github/brentp/cyvcf2", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/cyvcf2"}, {"uid": "github/brentp/nim-lapper", "html_url": "https://rseng.github.io/software/repository/github/brentp/nim-lapper", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/nim-lapper"}, {"uid": "github/brentp/peddy", "html_url": "https://rseng.github.io/software/repository/github/brentp/peddy", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/peddy"}, {"uid": "github/brentp/mosdepth", "html_url": "https://rseng.github.io/software/repository/github/brentp/mosdepth", "api_url": "https://rseng.github.io/software/api/repos/github/brentp/mosdepth"}, {"uid": "github/swiftbiosciences/primerclip", "html_url": "https://rseng.github.io/software/repository/github/swiftbiosciences/primerclip", "api_url": "https://rseng.github.io/software/api/repos/github/swiftbiosciences/primerclip"}, {"uid": "github/big-data-lab-team/spot", "html_url": "https://rseng.github.io/software/repository/github/big-data-lab-team/spot", "api_url": "https://rseng.github.io/software/api/repos/github/big-data-lab-team/spot"}, {"uid": "github/percolator/percolator", "html_url": "https://rseng.github.io/software/repository/github/percolator/percolator", "api_url": "https://rseng.github.io/software/api/repos/github/percolator/percolator"}, {"uid": "github/QingyuLiaib/PLA-MoRe", "html_url": "https://rseng.github.io/software/repository/github/QingyuLiaib/PLA-MoRe", "api_url": "https://rseng.github.io/software/api/repos/github/QingyuLiaib/PLA-MoRe"}, {"uid": "github/atzberg/mlmod", "html_url": "https://rseng.github.io/software/repository/github/atzberg/mlmod", "api_url": "https://rseng.github.io/software/api/repos/github/atzberg/mlmod"}, {"uid": "github/huishenlab/biscuit", "html_url": "https://rseng.github.io/software/repository/github/huishenlab/biscuit", "api_url": "https://rseng.github.io/software/api/repos/github/huishenlab/biscuit"}, {"uid": "github/sjbeckett/localcovid19now", "html_url": "https://rseng.github.io/software/repository/github/sjbeckett/localcovid19now", "api_url": "https://rseng.github.io/software/api/repos/github/sjbeckett/localcovid19now"}, {"uid": "github/USEPA/MCSimMod", "html_url": "https://rseng.github.io/software/repository/github/USEPA/MCSimMod", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/MCSimMod"}, {"uid": "github/USEPA/harmonize-wq", "html_url": "https://rseng.github.io/software/repository/github/USEPA/harmonize-wq", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/harmonize-wq"}, {"uid": "github/USEPA/peat", "html_url": "https://rseng.github.io/software/repository/github/USEPA/peat", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/peat"}, {"uid": "github/USEPA/SSN2", "html_url": "https://rseng.github.io/software/repository/github/USEPA/SSN2", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/SSN2"}, {"uid": "github/USEPA/nsink", "html_url": "https://rseng.github.io/software/repository/github/USEPA/nsink", "api_url": "https://rseng.github.io/software/api/repos/github/USEPA/nsink"}, {"uid": "github/PhysiBoSS/PhysiBoSS", "html_url": "https://rseng.github.io/software/repository/github/PhysiBoSS/PhysiBoSS", "api_url": "https://rseng.github.io/software/api/repos/github/PhysiBoSS/PhysiBoSS"}, {"uid": "github/GeodynamicWorldBuilder/WorldBuilder", "html_url": "https://rseng.github.io/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/GeodynamicWorldBuilder/WorldBuilder"}, {"uid": "github/2decomp-fft/2decomp-fft", "html_url": "https://rseng.github.io/software/repository/github/2decomp-fft/2decomp-fft", "api_url": "https://rseng.github.io/software/api/repos/github/2decomp-fft/2decomp-fft"}, {"uid": "github/COSMIC-PopSynth/COSMIC", "html_url": "https://rseng.github.io/software/repository/github/COSMIC-PopSynth/COSMIC", "api_url": "https://rseng.github.io/software/api/repos/github/COSMIC-PopSynth/COSMIC"}, {"uid": "github/DrMarc/slab", "html_url": "https://rseng.github.io/software/repository/github/DrMarc/slab", "api_url": "https://rseng.github.io/software/api/repos/github/DrMarc/slab"}, {"uid": "github/RozanskiT/suppnet", "html_url": "https://rseng.github.io/software/repository/github/RozanskiT/suppnet", "api_url": "https://rseng.github.io/software/api/repos/github/RozanskiT/suppnet"}, {"uid": "github/YenWenWang/HapDipKinship", "html_url": "https://rseng.github.io/software/repository/github/YenWenWang/HapDipKinship", "api_url": "https://rseng.github.io/software/api/repos/github/YenWenWang/HapDipKinship"}, {"uid": "github/BradyAJohnston/MolecularNodes", "html_url": "https://rseng.github.io/software/repository/github/BradyAJohnston/MolecularNodes", "api_url": "https://rseng.github.io/software/api/repos/github/BradyAJohnston/MolecularNodes"}, {"uid": "github/rribeiro-sci/pygomodo", "html_url": "https://rseng.github.io/software/repository/github/rribeiro-sci/pygomodo", "api_url": "https://rseng.github.io/software/api/repos/github/rribeiro-sci/pygomodo"}, {"uid": "github/vrodgom/statmorph", "html_url": "https://rseng.github.io/software/repository/github/vrodgom/statmorph", "api_url": "https://rseng.github.io/software/api/repos/github/vrodgom/statmorph"}, {"uid": "github/VALENCE-software/VALENCE", "html_url": "https://rseng.github.io/software/repository/github/VALENCE-software/VALENCE", "api_url": "https://rseng.github.io/software/api/repos/github/VALENCE-software/VALENCE"}, {"uid": "github/RenLabBioinformatics/M6Allele", "html_url": "https://rseng.github.io/software/repository/github/RenLabBioinformatics/M6Allele", "api_url": "https://rseng.github.io/software/api/repos/github/RenLabBioinformatics/M6Allele"}, {"uid": "github/jesford/cluster-lensing", "html_url": "https://rseng.github.io/software/repository/github/jesford/cluster-lensing", "api_url": "https://rseng.github.io/software/api/repos/github/jesford/cluster-lensing"}, {"uid": "github/unmannedlab/ekf_cal", "html_url": "https://rseng.github.io/software/repository/github/unmannedlab/ekf_cal", "api_url": "https://rseng.github.io/software/api/repos/github/unmannedlab/ekf_cal"}, {"uid": "github/guynir42/radon", "html_url": "https://rseng.github.io/software/repository/github/guynir42/radon", "api_url": "https://rseng.github.io/software/api/repos/github/guynir42/radon"}, {"uid": "github/Blosc/c-blosc", "html_url": "https://rseng.github.io/software/repository/github/Blosc/c-blosc", "api_url": "https://rseng.github.io/software/api/repos/github/Blosc/c-blosc"}, {"uid": "github/amkrajewski/nimCSO", "html_url": "https://rseng.github.io/software/repository/github/amkrajewski/nimCSO", "api_url": "https://rseng.github.io/software/api/repos/github/amkrajewski/nimCSO"}, {"uid": "github/ouyang-lab/PRAS", "html_url": "https://rseng.github.io/software/repository/github/ouyang-lab/PRAS", "api_url": "https://rseng.github.io/software/api/repos/github/ouyang-lab/PRAS"}, {"uid": "github/ogotoh/spaln", "html_url": "https://rseng.github.io/software/repository/github/ogotoh/spaln", "api_url": "https://rseng.github.io/software/api/repos/github/ogotoh/spaln"}, {"uid": "github/lanzen/ampliconnoise", "html_url": "https://rseng.github.io/software/repository/github/lanzen/ampliconnoise", "api_url": "https://rseng.github.io/software/api/repos/github/lanzen/ampliconnoise"}, {"uid": "github/jaschers/damspi", "html_url": "https://rseng.github.io/software/repository/github/jaschers/damspi", "api_url": "https://rseng.github.io/software/api/repos/github/jaschers/damspi"}, {"uid": "github/uclchem/SpectralRadex", "html_url": "https://rseng.github.io/software/repository/github/uclchem/SpectralRadex", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/SpectralRadex"}, {"uid": "github/uclchem/Chemulator", "html_url": "https://rseng.github.io/software/repository/github/uclchem/Chemulator", "api_url": "https://rseng.github.io/software/api/repos/github/uclchem/Chemulator"}, {"uid": "github/Orin-beep/PlasGO", "html_url": "https://rseng.github.io/software/repository/github/Orin-beep/PlasGO", "api_url": "https://rseng.github.io/software/api/repos/github/Orin-beep/PlasGO"}, {"uid": "github/nathanchara/l1periodogram", "html_url": "https://rseng.github.io/software/repository/github/nathanchara/l1periodogram", "api_url": "https://rseng.github.io/software/api/repos/github/nathanchara/l1periodogram"}, {"uid": "github/hasindu2008/slow5tools", "html_url": "https://rseng.github.io/software/repository/github/hasindu2008/slow5tools", "api_url": "https://rseng.github.io/software/api/repos/github/hasindu2008/slow5tools"}, {"uid": "github/fair-software/fairtally", "html_url": "https://rseng.github.io/software/repository/github/fair-software/fairtally", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/fairtally"}, {"uid": "github/fair-software/howfairis", "html_url": "https://rseng.github.io/software/repository/github/fair-software/howfairis", "api_url": "https://rseng.github.io/software/api/repos/github/fair-software/howfairis"}, {"uid": "github/rvaser/sword", "html_url": "https://rseng.github.io/software/repository/github/rvaser/sword", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/sword"}, {"uid": "github/rvaser/rampler", "html_url": "https://rseng.github.io/software/repository/github/rvaser/rampler", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/rampler"}, {"uid": "github/rvaser/spoa", "html_url": "https://rseng.github.io/software/repository/github/rvaser/spoa", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/spoa"}, {"uid": "github/rvaser/bioparser", "html_url": "https://rseng.github.io/software/repository/github/rvaser/bioparser", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/bioparser"}, {"uid": "github/rvaser/thread_pool", "html_url": "https://rseng.github.io/software/repository/github/rvaser/thread_pool", "api_url": "https://rseng.github.io/software/api/repos/github/rvaser/thread_pool"}, {"uid": "github/Zilong-Li/PCAone", "html_url": "https://rseng.github.io/software/repository/github/Zilong-Li/PCAone", "api_url": "https://rseng.github.io/software/api/repos/github/Zilong-Li/PCAone"}, {"uid": "github/PACurran/MCSpearman", "html_url": "https://rseng.github.io/software/repository/github/PACurran/MCSpearman", "api_url": "https://rseng.github.io/software/api/repos/github/PACurran/MCSpearman"}, {"uid": "github/flu-crew/smot", "html_url": "https://rseng.github.io/software/repository/github/flu-crew/smot", "api_url": "https://rseng.github.io/software/api/repos/github/flu-crew/smot"}, {"uid": "github/hypre-space/hypredrive", "html_url": "https://rseng.github.io/software/repository/github/hypre-space/hypredrive", "api_url": "https://rseng.github.io/software/api/repos/github/hypre-space/hypredrive"}, {"uid": "github/yymao/abundancematching", "html_url": "https://rseng.github.io/software/repository/github/yymao/abundancematching", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/abundancematching"}, {"uid": "github/yymao/adstex", "html_url": "https://rseng.github.io/software/repository/github/yymao/adstex", "api_url": "https://rseng.github.io/software/api/repos/github/yymao/adstex"}, {"uid": "github/ZhaiLab-SUSTech/FLEPSeq", "html_url": "https://rseng.github.io/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaiLab-SUSTech/FLEPSeq"}, {"uid": "github/COVID-IWG/epimargin", "html_url": "https://rseng.github.io/software/repository/github/COVID-IWG/epimargin", "api_url": "https://rseng.github.io/software/api/repos/github/COVID-IWG/epimargin"}, {"uid": "github/marius311/cosmoslik", "html_url": "https://rseng.github.io/software/repository/github/marius311/cosmoslik", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/cosmoslik"}, {"uid": "github/marius311/pypico", "html_url": "https://rseng.github.io/software/repository/github/marius311/pypico", "api_url": "https://rseng.github.io/software/api/repos/github/marius311/pypico"}, {"uid": "github/paulbrodersen/netgraph", "html_url": "https://rseng.github.io/software/repository/github/paulbrodersen/netgraph", "api_url": "https://rseng.github.io/software/api/repos/github/paulbrodersen/netgraph"}, {"uid": "github/LuisGoncalves1/CLOWN", "html_url": "https://rseng.github.io/software/repository/github/LuisGoncalves1/CLOWN", "api_url": "https://rseng.github.io/software/api/repos/github/LuisGoncalves1/CLOWN"}, {"uid": "github/domschrei/mallob", "html_url": "https://rseng.github.io/software/repository/github/domschrei/mallob", "api_url": "https://rseng.github.io/software/api/repos/github/domschrei/mallob"}, {"uid": "github/wetransform-os/ProMCDA", "html_url": "https://rseng.github.io/software/repository/github/wetransform-os/ProMCDA", "api_url": "https://rseng.github.io/software/api/repos/github/wetransform-os/ProMCDA"}, {"uid": "github/youngjookim/sdr", "html_url": "https://rseng.github.io/software/repository/github/youngjookim/sdr", "api_url": "https://rseng.github.io/software/api/repos/github/youngjookim/sdr"}, {"uid": "github/brandon-rhodes/python-jplephem", "html_url": "https://rseng.github.io/software/repository/github/brandon-rhodes/python-jplephem", "api_url": "https://rseng.github.io/software/api/repos/github/brandon-rhodes/python-jplephem"}, {"uid": "github/thomaspinder/GPJax", "html_url": "https://rseng.github.io/software/repository/github/thomaspinder/GPJax", "api_url": "https://rseng.github.io/software/api/repos/github/thomaspinder/GPJax"}, {"uid": "github/marver17/DICOMSEG_Converter", "html_url": "https://rseng.github.io/software/repository/github/marver17/DICOMSEG_Converter", "api_url": "https://rseng.github.io/software/api/repos/github/marver17/DICOMSEG_Converter"}, {"uid": "github/rajewsky-lab/dropbead", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/dropbead", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/dropbead"}, {"uid": "github/rajewsky-lab/novosparc", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/novosparc", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/novosparc"}, {"uid": "github/rajewsky-lab/spacemake", "html_url": "https://rseng.github.io/software/repository/github/rajewsky-lab/spacemake", "api_url": "https://rseng.github.io/software/api/repos/github/rajewsky-lab/spacemake"}, {"uid": "github/JulianKarlBauer/mechkit", "html_url": "https://rseng.github.io/software/repository/github/JulianKarlBauer/mechkit", "api_url": "https://rseng.github.io/software/api/repos/github/JulianKarlBauer/mechkit"}, {"uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", "html_url": "https://rseng.github.io/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", "api_url": "https://rseng.github.io/software/api/repos/github/ismael-mendoza/ShapeMeasurementFisherFormalism"}, {"uid": "github/martenlourens/pySDR", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/pySDR", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/pySDR"}, {"uid": "github/martenlourens/SHARC", "html_url": "https://rseng.github.io/software/repository/github/martenlourens/SHARC", "api_url": "https://rseng.github.io/software/api/repos/github/martenlourens/SHARC"}, {"uid": "github/suneeshjacob/ACRoD", "html_url": "https://rseng.github.io/software/repository/github/suneeshjacob/ACRoD", "api_url": "https://rseng.github.io/software/api/repos/github/suneeshjacob/ACRoD"}, {"uid": "github/sagepublishing/rejected_article_tracker_pkg", "html_url": "https://rseng.github.io/software/repository/github/sagepublishing/rejected_article_tracker_pkg", "api_url": "https://rseng.github.io/software/api/repos/github/sagepublishing/rejected_article_tracker_pkg"}, {"uid": "github/liuhao-cn/fastSHT", "html_url": "https://rseng.github.io/software/repository/github/liuhao-cn/fastSHT", "api_url": "https://rseng.github.io/software/api/repos/github/liuhao-cn/fastSHT"}, {"uid": "github/LucaMalavolta/CCFpams", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/CCFpams", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/CCFpams"}, {"uid": "github/LucaMalavolta/PyORBIT", "html_url": "https://rseng.github.io/software/repository/github/LucaMalavolta/PyORBIT", "api_url": "https://rseng.github.io/software/api/repos/github/LucaMalavolta/PyORBIT"}, {"uid": "github/ericmandel/funtools", "html_url": "https://rseng.github.io/software/repository/github/ericmandel/funtools", "api_url": "https://rseng.github.io/software/api/repos/github/ericmandel/funtools"}, {"uid": "github/carrerajimenez/pyCatIndex", "html_url": "https://rseng.github.io/software/repository/github/carrerajimenez/pyCatIndex", "api_url": "https://rseng.github.io/software/api/repos/github/carrerajimenez/pyCatIndex"}, {"uid": "github/hyex-research/AquaFetch", "html_url": "https://rseng.github.io/software/repository/github/hyex-research/AquaFetch", "api_url": "https://rseng.github.io/software/api/repos/github/hyex-research/AquaFetch"}, {"uid": "github/oliverphilcox/Spectra-Without-Windows", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Spectra-Without-Windows", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Spectra-Without-Windows"}, {"uid": "github/oliverphilcox/PolyBin3D", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin3D", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin3D"}, {"uid": "github/oliverphilcox/EffectiveHalos", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/EffectiveHalos", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/EffectiveHalos"}, {"uid": "github/oliverphilcox/HADES", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HADES", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HADES"}, {"uid": "github/oliverphilcox/PolyBin", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/PolyBin", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/PolyBin"}, {"uid": "github/oliverphilcox/HIPSTER", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/HIPSTER", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/HIPSTER"}, {"uid": "github/oliverphilcox/Keplers-Goat-Herd", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/Keplers-Goat-Herd", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/Keplers-Goat-Herd"}, {"uid": "github/oliverphilcox/encore", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/encore", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/encore"}, {"uid": "github/oliverphilcox/RascalC", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/RascalC", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/RascalC"}, {"uid": "github/oliverphilcox/OneLoopBispectrum", "html_url": "https://rseng.github.io/software/repository/github/oliverphilcox/OneLoopBispectrum", "api_url": "https://rseng.github.io/software/api/repos/github/oliverphilcox/OneLoopBispectrum"}, {"uid": "github/Peter-Hogg/SLAP2_Utils", "html_url": "https://rseng.github.io/software/repository/github/Peter-Hogg/SLAP2_Utils", "api_url": "https://rseng.github.io/software/api/repos/github/Peter-Hogg/SLAP2_Utils"}, {"uid": "github/nach00gar/16SMicrobiomeMLFS", "html_url": "https://rseng.github.io/software/repository/github/nach00gar/16SMicrobiomeMLFS", "api_url": "https://rseng.github.io/software/api/repos/github/nach00gar/16SMicrobiomeMLFS"}, {"uid": "github/HERA-Team/hera_opm", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/hera_opm", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/hera_opm"}, {"uid": "github/HERA-Team/matvis", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/matvis", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/matvis"}, {"uid": "github/HERA-Team/aipy", "html_url": "https://rseng.github.io/software/repository/github/HERA-Team/aipy", "api_url": "https://rseng.github.io/software/api/repos/github/HERA-Team/aipy"}, {"uid": "github/rychallener/ThERESA", "html_url": "https://rseng.github.io/software/repository/github/rychallener/ThERESA", "api_url": "https://rseng.github.io/software/api/repos/github/rychallener/ThERESA"}, {"uid": "github/nationalparkservice/NPSdataverse", "html_url": "https://rseng.github.io/software/repository/github/nationalparkservice/NPSdataverse", "api_url": "https://rseng.github.io/software/api/repos/github/nationalparkservice/NPSdataverse"}, {"uid": "github/c3s-magic/c3s-magic-wps", "html_url": "https://rseng.github.io/software/repository/github/c3s-magic/c3s-magic-wps", "api_url": "https://rseng.github.io/software/api/repos/github/c3s-magic/c3s-magic-wps"}, {"uid": "github/LBNL-ETA/MSWH", "html_url": "https://rseng.github.io/software/repository/github/LBNL-ETA/MSWH", "api_url": "https://rseng.github.io/software/api/repos/github/LBNL-ETA/MSWH"}, {"uid": "github/UcarLab/AMULET", "html_url": "https://rseng.github.io/software/repository/github/UcarLab/AMULET", "api_url": "https://rseng.github.io/software/api/repos/github/UcarLab/AMULET"}, {"uid": "github/biosimulations/Biosimulations", "html_url": "https://rseng.github.io/software/repository/github/biosimulations/Biosimulations", "api_url": "https://rseng.github.io/software/api/repos/github/biosimulations/Biosimulations"}, {"uid": "github/ToHanwei/Genome2OR", "html_url": "https://rseng.github.io/software/repository/github/ToHanwei/Genome2OR", "api_url": "https://rseng.github.io/software/api/repos/github/ToHanwei/Genome2OR"}, {"uid": "github/gem-pasteur/macsylib", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsylib", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsylib"}, {"uid": "github/gem-pasteur/Integron_Finder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/Integron_Finder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/Integron_Finder"}, {"uid": "github/gem-pasteur/macsyfinder", "html_url": "https://rseng.github.io/software/repository/github/gem-pasteur/macsyfinder", "api_url": "https://rseng.github.io/software/api/repos/github/gem-pasteur/macsyfinder"}, {"uid": "github/hildebra/LCA", "html_url": "https://rseng.github.io/software/repository/github/hildebra/LCA", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/LCA"}, {"uid": "github/hildebra/sdm", "html_url": "https://rseng.github.io/software/repository/github/hildebra/sdm", "api_url": "https://rseng.github.io/software/api/repos/github/hildebra/sdm"}, {"uid": "github/JakobBD/pounce", "html_url": "https://rseng.github.io/software/repository/github/JakobBD/pounce", "api_url": "https://rseng.github.io/software/api/repos/github/JakobBD/pounce"}, {"uid": "github/Pinlyu3/LRLoop", "html_url": "https://rseng.github.io/software/repository/github/Pinlyu3/LRLoop", "api_url": "https://rseng.github.io/software/api/repos/github/Pinlyu3/LRLoop"}, {"uid": "github/pharo-project/pharo", "html_url": "https://rseng.github.io/software/repository/github/pharo-project/pharo", "api_url": "https://rseng.github.io/software/api/repos/github/pharo-project/pharo"}, {"uid": "github/dspelaez/extended-wdm", "html_url": "https://rseng.github.io/software/repository/github/dspelaez/extended-wdm", "api_url": "https://rseng.github.io/software/api/repos/github/dspelaez/extended-wdm"}, {"uid": "github/nayu0419/stMMR", "html_url": "https://rseng.github.io/software/repository/github/nayu0419/stMMR", "api_url": "https://rseng.github.io/software/api/repos/github/nayu0419/stMMR"}, {"uid": "github/AstraZeneca/kallisto", "html_url": "https://rseng.github.io/software/repository/github/AstraZeneca/kallisto", "api_url": "https://rseng.github.io/software/api/repos/github/AstraZeneca/kallisto"}, {"uid": "github/CaymanUnterborn/ExoPlex", "html_url": "https://rseng.github.io/software/repository/github/CaymanUnterborn/ExoPlex", "api_url": "https://rseng.github.io/software/api/repos/github/CaymanUnterborn/ExoPlex"}, {"uid": "github/auranic/ClinTrajan", "html_url": "https://rseng.github.io/software/repository/github/auranic/ClinTrajan", "api_url": "https://rseng.github.io/software/api/repos/github/auranic/ClinTrajan"}, {"uid": "github/pjcigan/obsplanning", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/obsplanning", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/obsplanning"}, {"uid": "github/pjcigan/pysymlog", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/pysymlog", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/pysymlog"}, {"uid": "github/pjcigan/multicolorfits", "html_url": "https://rseng.github.io/software/repository/github/pjcigan/multicolorfits", "api_url": "https://rseng.github.io/software/api/repos/github/pjcigan/multicolorfits"}, {"uid": "github/pavolgaj/OCFit", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/OCFit", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/OCFit"}, {"uid": "github/pavolgaj/ObsPlanner", "html_url": "https://rseng.github.io/software/repository/github/pavolgaj/ObsPlanner", "api_url": "https://rseng.github.io/software/api/repos/github/pavolgaj/ObsPlanner"}, {"uid": "github/henrysky/astroNN", "html_url": "https://rseng.github.io/software/repository/github/henrysky/astroNN", "api_url": "https://rseng.github.io/software/api/repos/github/henrysky/astroNN"}, {"uid": "github/dankelley/oce", "html_url": "https://rseng.github.io/software/repository/github/dankelley/oce", "api_url": "https://rseng.github.io/software/api/repos/github/dankelley/oce"}, {"uid": "github/Ramialison-Lab-ARMI/3DCardiomics", "html_url": "https://rseng.github.io/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", "api_url": "https://rseng.github.io/software/api/repos/github/Ramialison-Lab-ARMI/3DCardiomics"}, {"uid": "github/hauselin/ollama-r", "html_url": "https://rseng.github.io/software/repository/github/hauselin/ollama-r", "api_url": "https://rseng.github.io/software/api/repos/github/hauselin/ollama-r"}, {"uid": "github/statsmodels/statsmodels", "html_url": "https://rseng.github.io/software/repository/github/statsmodels/statsmodels", "api_url": "https://rseng.github.io/software/api/repos/github/statsmodels/statsmodels"}, {"uid": "github/takfung/ResDisMapper", "html_url": "https://rseng.github.io/software/repository/github/takfung/ResDisMapper", "api_url": "https://rseng.github.io/software/api/repos/github/takfung/ResDisMapper"}, {"uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "html_url": "https://rseng.github.io/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", "api_url": "https://rseng.github.io/software/api/repos/github/bengeof/QPoweredCompound2DeNovoDrugPropMax"}, {"uid": "github/scikit-learn/scikit-learn", "html_url": "https://rseng.github.io/software/repository/github/scikit-learn/scikit-learn", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-learn/scikit-learn"}, {"uid": "github/nickk124/RCR", "html_url": "https://rseng.github.io/software/repository/github/nickk124/RCR", "api_url": "https://rseng.github.io/software/api/repos/github/nickk124/RCR"}, {"uid": "github/devosoft/avida", "html_url": "https://rseng.github.io/software/repository/github/devosoft/avida", "api_url": "https://rseng.github.io/software/api/repos/github/devosoft/avida"}, {"uid": "github/MingBit/PySCNet", "html_url": "https://rseng.github.io/software/repository/github/MingBit/PySCNet", "api_url": "https://rseng.github.io/software/api/repos/github/MingBit/PySCNet"}, {"uid": "github/RelNucAs/bns_nurates", "html_url": "https://rseng.github.io/software/repository/github/RelNucAs/bns_nurates", "api_url": "https://rseng.github.io/software/api/repos/github/RelNucAs/bns_nurates"}, {"uid": "github/MOSAICS-NIH/MOSAICS", "html_url": "https://rseng.github.io/software/repository/github/MOSAICS-NIH/MOSAICS", "api_url": "https://rseng.github.io/software/api/repos/github/MOSAICS-NIH/MOSAICS"}, {"uid": "github/purmortal/galcraft", "html_url": "https://rseng.github.io/software/repository/github/purmortal/galcraft", "api_url": "https://rseng.github.io/software/api/repos/github/purmortal/galcraft"}, {"uid": "github/aritraghsh09/GaMorNet", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMorNet", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMorNet"}, {"uid": "github/aritraghsh09/GaMPEN", "html_url": "https://rseng.github.io/software/repository/github/aritraghsh09/GaMPEN", "api_url": "https://rseng.github.io/software/api/repos/github/aritraghsh09/GaMPEN"}, {"uid": "github/lijing28101/maize_pyrpipe", "html_url": "https://rseng.github.io/software/repository/github/lijing28101/maize_pyrpipe", "api_url": "https://rseng.github.io/software/api/repos/github/lijing28101/maize_pyrpipe"}, {"uid": "github/ashleefv/ACEInhibPKPD", "html_url": "https://rseng.github.io/software/repository/github/ashleefv/ACEInhibPKPD", "api_url": "https://rseng.github.io/software/api/repos/github/ashleefv/ACEInhibPKPD"}, {"uid": "github/Jashcraf/katsu", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/katsu", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/katsu"}, {"uid": "github/Jashcraf/poke", "html_url": "https://rseng.github.io/software/repository/github/Jashcraf/poke", "api_url": "https://rseng.github.io/software/api/repos/github/Jashcraf/poke"}, {"uid": "github/sinc-lab/miRe2e", "html_url": "https://rseng.github.io/software/repository/github/sinc-lab/miRe2e", "api_url": "https://rseng.github.io/software/api/repos/github/sinc-lab/miRe2e"}, {"uid": "github/ska-sa/hibayes", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/hibayes", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/hibayes"}, {"uid": "github/ska-sa/katdal", "html_url": "https://rseng.github.io/software/repository/github/ska-sa/katdal", "api_url": "https://rseng.github.io/software/api/repos/github/ska-sa/katdal"}, {"uid": "github/snakesonabrain/groundhog", "html_url": "https://rseng.github.io/software/repository/github/snakesonabrain/groundhog", "api_url": "https://rseng.github.io/software/api/repos/github/snakesonabrain/groundhog"}, {"uid": "github/Gaiana/nirdust", "html_url": "https://rseng.github.io/software/repository/github/Gaiana/nirdust", "api_url": "https://rseng.github.io/software/api/repos/github/Gaiana/nirdust"}, {"uid": "github/dsavransky/EXOSIMS", "html_url": "https://rseng.github.io/software/repository/github/dsavransky/EXOSIMS", "api_url": "https://rseng.github.io/software/api/repos/github/dsavransky/EXOSIMS"}, {"uid": "github/gpantel/MolPainter", "html_url": "https://rseng.github.io/software/repository/github/gpantel/MolPainter", "api_url": "https://rseng.github.io/software/api/repos/github/gpantel/MolPainter"}, {"uid": "github/merenlab/anvio", "html_url": "https://rseng.github.io/software/repository/github/merenlab/anvio", "api_url": "https://rseng.github.io/software/api/repos/github/merenlab/anvio"}, {"uid": "github/BobChallen/Basic-mzml-plotter", "html_url": "https://rseng.github.io/software/repository/github/BobChallen/Basic-mzml-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/BobChallen/Basic-mzml-plotter"}, {"uid": "github/PENTACLE-Team/PENTACLE", "html_url": "https://rseng.github.io/software/repository/github/PENTACLE-Team/PENTACLE", "api_url": "https://rseng.github.io/software/api/repos/github/PENTACLE-Team/PENTACLE"}, {"uid": "github/AlidesChimin/SATA", "html_url": "https://rseng.github.io/software/repository/github/AlidesChimin/SATA", "api_url": "https://rseng.github.io/software/api/repos/github/AlidesChimin/SATA"}, {"uid": "github/baptklein/ATMOSPHERIX_DATA_RED", "html_url": "https://rseng.github.io/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", "api_url": "https://rseng.github.io/software/api/repos/github/baptklein/ATMOSPHERIX_DATA_RED"}, {"uid": "github/niosh-mining/obsplus", "html_url": "https://rseng.github.io/software/repository/github/niosh-mining/obsplus", "api_url": "https://rseng.github.io/software/api/repos/github/niosh-mining/obsplus"}, {"uid": "github/OliverFHD/GPUniverse", "html_url": "https://rseng.github.io/software/repository/github/OliverFHD/GPUniverse", "api_url": "https://rseng.github.io/software/api/repos/github/OliverFHD/GPUniverse"}, {"uid": "github/savage13/sacio", "html_url": "https://rseng.github.io/software/repository/github/savage13/sacio", "api_url": "https://rseng.github.io/software/api/repos/github/savage13/sacio"}, {"uid": "github/changhoonhahn/pySpectrum", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/pySpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/pySpectrum"}, {"uid": "github/changhoonhahn/provabgs", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/provabgs", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/provabgs"}, {"uid": "github/changhoonhahn/haloflow", "html_url": "https://rseng.github.io/software/repository/github/changhoonhahn/haloflow", "api_url": "https://rseng.github.io/software/api/repos/github/changhoonhahn/haloflow"}, {"uid": "github/dkirkby/gphist", "html_url": "https://rseng.github.io/software/repository/github/dkirkby/gphist", "api_url": "https://rseng.github.io/software/api/repos/github/dkirkby/gphist"}, {"uid": "github/musoke/ultradark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/ultradark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/ultradark.jl"}, {"uid": "github/musoke/UltraDark.jl", "html_url": "https://rseng.github.io/software/repository/github/musoke/UltraDark.jl", "api_url": "https://rseng.github.io/software/api/repos/github/musoke/UltraDark.jl"}, {"uid": "github/nuc-astro/winnet", "html_url": "https://rseng.github.io/software/repository/github/nuc-astro/winnet", "api_url": "https://rseng.github.io/software/api/repos/github/nuc-astro/winnet"}, {"uid": "github/PapenfussLab/gridss", "html_url": "https://rseng.github.io/software/repository/github/PapenfussLab/gridss", "api_url": "https://rseng.github.io/software/api/repos/github/PapenfussLab/gridss"}, {"uid": "github/pyro-kinetics/pyrokinetics", "html_url": "https://rseng.github.io/software/repository/github/pyro-kinetics/pyrokinetics", "api_url": "https://rseng.github.io/software/api/repos/github/pyro-kinetics/pyrokinetics"}, {"uid": "github/illumina/pyflow", "html_url": "https://rseng.github.io/software/repository/github/illumina/pyflow", "api_url": "https://rseng.github.io/software/api/repos/github/illumina/pyflow"}, {"uid": "github/tidymodels/stacks", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/stacks", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/stacks"}, {"uid": "github/tidymodels/infer", "html_url": "https://rseng.github.io/software/repository/github/tidymodels/infer", "api_url": "https://rseng.github.io/software/api/repos/github/tidymodels/infer"}, {"uid": "github/tlverse/hal9001", "html_url": "https://rseng.github.io/software/repository/github/tlverse/hal9001", "api_url": "https://rseng.github.io/software/api/repos/github/tlverse/hal9001"}, {"uid": "github/microplastics-cluster/fragment-mnp", "html_url": "https://rseng.github.io/software/repository/github/microplastics-cluster/fragment-mnp", "api_url": "https://rseng.github.io/software/api/repos/github/microplastics-cluster/fragment-mnp"}, {"uid": "github/NiallJeffrey/DeepMass", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/DeepMass", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/DeepMass"}, {"uid": "github/NiallJeffrey/BornRaytrace", "html_url": "https://rseng.github.io/software/repository/github/NiallJeffrey/BornRaytrace", "api_url": "https://rseng.github.io/software/api/repos/github/NiallJeffrey/BornRaytrace"}, {"uid": "github/rainwoodman/bigfile", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/bigfile"}, {"uid": "github/rainwoodman/kdcount", "html_url": "https://rseng.github.io/software/repository/github/rainwoodman/kdcount", "api_url": "https://rseng.github.io/software/api/repos/github/rainwoodman/kdcount"}, {"uid": "github/bethgelab/foolbox", "html_url": "https://rseng.github.io/software/repository/github/bethgelab/foolbox", "api_url": "https://rseng.github.io/software/api/repos/github/bethgelab/foolbox"}, {"uid": "github/alexdobin/STAR", "html_url": "https://rseng.github.io/software/repository/github/alexdobin/STAR", "api_url": "https://rseng.github.io/software/api/repos/github/alexdobin/STAR"}, {"uid": "github/SWIFTSIM/emulator", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/emulator", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/emulator"}, {"uid": "github/SWIFTSIM/SOAP", "html_url": "https://rseng.github.io/software/repository/github/SWIFTSIM/SOAP", "api_url": "https://rseng.github.io/software/api/repos/github/SWIFTSIM/SOAP"}, {"uid": "github/utpal-singh/SAnTex", "html_url": "https://rseng.github.io/software/repository/github/utpal-singh/SAnTex", "api_url": "https://rseng.github.io/software/api/repos/github/utpal-singh/SAnTex"}, {"uid": "github/alexfields/ORF-RATER", "html_url": "https://rseng.github.io/software/repository/github/alexfields/ORF-RATER", "api_url": "https://rseng.github.io/software/api/repos/github/alexfields/ORF-RATER"}, {"uid": "github/OpenMDAO/dymos", "html_url": "https://rseng.github.io/software/repository/github/OpenMDAO/dymos", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMDAO/dymos"}, {"uid": "github/edwardoughton/itmlogic", "html_url": "https://rseng.github.io/software/repository/github/edwardoughton/itmlogic", "api_url": "https://rseng.github.io/software/api/repos/github/edwardoughton/itmlogic"}, {"uid": "github/elkebir-group/derna", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/derna", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/derna"}, {"uid": "github/elkebir-group/Jumper", "html_url": "https://rseng.github.io/software/repository/github/elkebir-group/Jumper", "api_url": "https://rseng.github.io/software/api/repos/github/elkebir-group/Jumper"}, {"uid": "github/altjerue/paramo", "html_url": "https://rseng.github.io/software/repository/github/altjerue/paramo", "api_url": "https://rseng.github.io/software/api/repos/github/altjerue/paramo"}, {"uid": "github/KerryAM-R/ggVolcanoR", "html_url": "https://rseng.github.io/software/repository/github/KerryAM-R/ggVolcanoR", "api_url": "https://rseng.github.io/software/api/repos/github/KerryAM-R/ggVolcanoR"}, {"uid": "github/HUST-DataMan/FRMC", "html_url": "https://rseng.github.io/software/repository/github/HUST-DataMan/FRMC", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-DataMan/FRMC"}, {"uid": "github/BD2KGenomics/toil", "html_url": "https://rseng.github.io/software/repository/github/BD2KGenomics/toil", "api_url": "https://rseng.github.io/software/api/repos/github/BD2KGenomics/toil"}, {"uid": "github/sib-swiss/pftools3", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/pftools3", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/pftools3"}, {"uid": "github/sib-swiss/glittr", "html_url": "https://rseng.github.io/software/repository/github/sib-swiss/glittr", "api_url": "https://rseng.github.io/software/api/repos/github/sib-swiss/glittr"}, {"uid": "github/Acellera/htmd", "html_url": "https://rseng.github.io/software/repository/github/Acellera/htmd", "api_url": "https://rseng.github.io/software/api/repos/github/Acellera/htmd"}, {"uid": "github/JanLeppert/GasChromatographySimulator.jl", "html_url": "https://rseng.github.io/software/repository/github/JanLeppert/GasChromatographySimulator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JanLeppert/GasChromatographySimulator.jl"}, {"uid": "github/roualdes/bridgestan", "html_url": "https://rseng.github.io/software/repository/github/roualdes/bridgestan", "api_url": "https://rseng.github.io/software/api/repos/github/roualdes/bridgestan"}, {"uid": "github/FabioRigamonti/pyADfit", "html_url": "https://rseng.github.io/software/repository/github/FabioRigamonti/pyADfit", "api_url": "https://rseng.github.io/software/api/repos/github/FabioRigamonti/pyADfit"}, {"uid": "github/PolyChord/PolyChordLite", "html_url": "https://rseng.github.io/software/repository/github/PolyChord/PolyChordLite", "api_url": "https://rseng.github.io/software/api/repos/github/PolyChord/PolyChordLite"}, {"uid": "github/mranuraggarg/supernovae_classification", "html_url": "https://rseng.github.io/software/repository/github/mranuraggarg/supernovae_classification", "api_url": "https://rseng.github.io/software/api/repos/github/mranuraggarg/supernovae_classification"}, {"uid": "github/computproteomics/ProteoMaker", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/ProteoMaker", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/ProteoMaker"}, {"uid": "github/computproteomics/OmicsQ", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/OmicsQ", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/OmicsQ"}, {"uid": "github/computproteomics/PolySTest", "html_url": "https://rseng.github.io/software/repository/github/computproteomics/PolySTest", "api_url": "https://rseng.github.io/software/api/repos/github/computproteomics/PolySTest"}, {"uid": "github/annajenul/UBayFS", "html_url": "https://rseng.github.io/software/repository/github/annajenul/UBayFS", "api_url": "https://rseng.github.io/software/api/repos/github/annajenul/UBayFS"}, {"uid": "github/yi-jia-li/cue", "html_url": "https://rseng.github.io/software/repository/github/yi-jia-li/cue", "api_url": "https://rseng.github.io/software/api/repos/github/yi-jia-li/cue"}, {"uid": "github/JHayoz/CROCODILE", "html_url": "https://rseng.github.io/software/repository/github/JHayoz/CROCODILE", "api_url": "https://rseng.github.io/software/api/repos/github/JHayoz/CROCODILE"}, {"uid": "github/deniswerth/cosmoflow", "html_url": "https://rseng.github.io/software/repository/github/deniswerth/cosmoflow", "api_url": "https://rseng.github.io/software/api/repos/github/deniswerth/cosmoflow"}, {"uid": "github/bshoshany/OGRe", "html_url": "https://rseng.github.io/software/repository/github/bshoshany/OGRe", "api_url": "https://rseng.github.io/software/api/repos/github/bshoshany/OGRe"}, {"uid": "github/jianhuig/fairmetrics", "html_url": "https://rseng.github.io/software/repository/github/jianhuig/fairmetrics", "api_url": "https://rseng.github.io/software/api/repos/github/jianhuig/fairmetrics"}, {"uid": "github/Kennicutt/SAUSERO", "html_url": "https://rseng.github.io/software/repository/github/Kennicutt/SAUSERO", "api_url": "https://rseng.github.io/software/api/repos/github/Kennicutt/SAUSERO"}, {"uid": "github/xfcui/onn4arg", "html_url": "https://rseng.github.io/software/repository/github/xfcui/onn4arg", "api_url": "https://rseng.github.io/software/api/repos/github/xfcui/onn4arg"}, {"uid": "github/RWTH-EBC/FiLiP", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/FiLiP", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/FiLiP"}, {"uid": "github/RWTH-EBC/AixCaliBuHA", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixCaliBuHA", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixCaliBuHA"}, {"uid": "github/RWTH-EBC/AixWeather", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/AixWeather", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/AixWeather"}, {"uid": "github/RWTH-EBC/districtgenerator", "html_url": "https://rseng.github.io/software/repository/github/RWTH-EBC/districtgenerator", "api_url": "https://rseng.github.io/software/api/repos/github/RWTH-EBC/districtgenerator"}, {"uid": "github/ybillchen/particle_spray", "html_url": "https://rseng.github.io/software/repository/github/ybillchen/particle_spray", "api_url": "https://rseng.github.io/software/api/repos/github/ybillchen/particle_spray"}, {"uid": "github/elizabethnewman/hessQuik", "html_url": "https://rseng.github.io/software/repository/github/elizabethnewman/hessQuik", "api_url": "https://rseng.github.io/software/api/repos/github/elizabethnewman/hessQuik"}, {"uid": "github/mperezcarrasco/AnomalyALeRCE", "html_url": "https://rseng.github.io/software/repository/github/mperezcarrasco/AnomalyALeRCE", "api_url": "https://rseng.github.io/software/api/repos/github/mperezcarrasco/AnomalyALeRCE"}, {"uid": "github/hsci-r/finnish-media-scrapers", "html_url": "https://rseng.github.io/software/repository/github/hsci-r/finnish-media-scrapers", "api_url": "https://rseng.github.io/software/api/repos/github/hsci-r/finnish-media-scrapers"}, {"uid": "github/Climdyn/qgs", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/qgs", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/qgs"}, {"uid": "github/Climdyn/auto-AUTO", "html_url": "https://rseng.github.io/software/repository/github/Climdyn/auto-AUTO", "api_url": "https://rseng.github.io/software/api/repos/github/Climdyn/auto-AUTO"}, {"uid": "github/Ajstros/pyripherals", "html_url": "https://rseng.github.io/software/repository/github/Ajstros/pyripherals", "api_url": "https://rseng.github.io/software/api/repos/github/Ajstros/pyripherals"}, {"uid": "github/faircloth-lab/phyluce", "html_url": "https://rseng.github.io/software/repository/github/faircloth-lab/phyluce", "api_url": "https://rseng.github.io/software/api/repos/github/faircloth-lab/phyluce"}, {"uid": "github/Freakwill/pyrimidine", "html_url": "https://rseng.github.io/software/repository/github/Freakwill/pyrimidine", "api_url": "https://rseng.github.io/software/api/repos/github/Freakwill/pyrimidine"}, {"uid": "github/pyiron/executorlib", "html_url": "https://rseng.github.io/software/repository/github/pyiron/executorlib", "api_url": "https://rseng.github.io/software/api/repos/github/pyiron/executorlib"}, {"uid": "github/Open-ET/flux-data-qaqc", "html_url": "https://rseng.github.io/software/repository/github/Open-ET/flux-data-qaqc", "api_url": "https://rseng.github.io/software/api/repos/github/Open-ET/flux-data-qaqc"}, {"uid": "github/wokast/RePrimAnd", "html_url": "https://rseng.github.io/software/repository/github/wokast/RePrimAnd", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/RePrimAnd"}, {"uid": "github/wokast/PyCactus", "html_url": "https://rseng.github.io/software/repository/github/wokast/PyCactus", "api_url": "https://rseng.github.io/software/api/repos/github/wokast/PyCactus"}, {"uid": "github/LabTranslationalArchitectomics/riboWaltz", "html_url": "https://rseng.github.io/software/repository/github/LabTranslationalArchitectomics/riboWaltz", "api_url": "https://rseng.github.io/software/api/repos/github/LabTranslationalArchitectomics/riboWaltz"}, {"uid": "github/FCS-analysis/multipletau", "html_url": "https://rseng.github.io/software/repository/github/FCS-analysis/multipletau", "api_url": "https://rseng.github.io/software/api/repos/github/FCS-analysis/multipletau"}, {"uid": "github/KBNLresearch/ochre", "html_url": "https://rseng.github.io/software/repository/github/KBNLresearch/ochre", "api_url": "https://rseng.github.io/software/api/repos/github/KBNLresearch/ochre"}, {"uid": "github/NeotomaDB/neotoma2", "html_url": "https://rseng.github.io/software/repository/github/NeotomaDB/neotoma2", "api_url": "https://rseng.github.io/software/api/repos/github/NeotomaDB/neotoma2"}, {"uid": "github/kibokov/grumpy", "html_url": "https://rseng.github.io/software/repository/github/kibokov/grumpy", "api_url": "https://rseng.github.io/software/api/repos/github/kibokov/grumpy"}, {"uid": "github/yongsukyee/uncertain_blackholemass", "html_url": "https://rseng.github.io/software/repository/github/yongsukyee/uncertain_blackholemass", "api_url": "https://rseng.github.io/software/api/repos/github/yongsukyee/uncertain_blackholemass"}, {"uid": "github/matthewholman/assist", "html_url": "https://rseng.github.io/software/repository/github/matthewholman/assist", "api_url": "https://rseng.github.io/software/api/repos/github/matthewholman/assist"}, {"uid": "github/aineniamh/snipit", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/snipit", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/snipit"}, {"uid": "github/aineniamh/squirrel", "html_url": "https://rseng.github.io/software/repository/github/aineniamh/squirrel", "api_url": "https://rseng.github.io/software/api/repos/github/aineniamh/squirrel"}, {"uid": "github/GreenScheduler/cats", "html_url": "https://rseng.github.io/software/repository/github/GreenScheduler/cats", "api_url": "https://rseng.github.io/software/api/repos/github/GreenScheduler/cats"}, {"uid": "github/PIK-LPJmL/lpjmlkit", "html_url": "https://rseng.github.io/software/repository/github/PIK-LPJmL/lpjmlkit", "api_url": "https://rseng.github.io/software/api/repos/github/PIK-LPJmL/lpjmlkit"}, {"uid": "github/cosmodesi/pycorr", "html_url": "https://rseng.github.io/software/repository/github/cosmodesi/pycorr", "api_url": "https://rseng.github.io/software/api/repos/github/cosmodesi/pycorr"}, {"uid": "github/tbrown122387/pf", "html_url": "https://rseng.github.io/software/repository/github/tbrown122387/pf", "api_url": "https://rseng.github.io/software/api/repos/github/tbrown122387/pf"}, {"uid": "github/karlotness/adrt", "html_url": "https://rseng.github.io/software/repository/github/karlotness/adrt", "api_url": "https://rseng.github.io/software/api/repos/github/karlotness/adrt"}, {"uid": "github/DavidT3/XGA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/XGA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/XGA"}, {"uid": "github/DavidT3/DAXA", "html_url": "https://rseng.github.io/software/repository/github/DavidT3/DAXA", "api_url": "https://rseng.github.io/software/api/repos/github/DavidT3/DAXA"}, {"uid": "github/florian-lienhard/MM-LSD", "html_url": "https://rseng.github.io/software/repository/github/florian-lienhard/MM-LSD", "api_url": "https://rseng.github.io/software/api/repos/github/florian-lienhard/MM-LSD"}, {"uid": "github/lamyj/odil", "html_url": "https://rseng.github.io/software/repository/github/lamyj/odil", "api_url": "https://rseng.github.io/software/api/repos/github/lamyj/odil"}, {"uid": "github/keflavich/HiGal_SEDfitter", "html_url": "https://rseng.github.io/software/repository/github/keflavich/HiGal_SEDfitter", "api_url": "https://rseng.github.io/software/api/repos/github/keflavich/HiGal_SEDfitter"}, {"uid": "github/dellytools/delly", "html_url": "https://rseng.github.io/software/repository/github/dellytools/delly", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/delly"}, {"uid": "github/dellytools/sansa", "html_url": "https://rseng.github.io/software/repository/github/dellytools/sansa", "api_url": "https://rseng.github.io/software/api/repos/github/dellytools/sansa"}, {"uid": "github/d-tear/SIAL", "html_url": "https://rseng.github.io/software/repository/github/d-tear/SIAL", "api_url": "https://rseng.github.io/software/api/repos/github/d-tear/SIAL"}, {"uid": "github/arkavo/CUDA-METRO", "html_url": "https://rseng.github.io/software/repository/github/arkavo/CUDA-METRO", "api_url": "https://rseng.github.io/software/api/repos/github/arkavo/CUDA-METRO"}, {"uid": "github/MillionConcepts/lhorizon", "html_url": "https://rseng.github.io/software/repository/github/MillionConcepts/lhorizon", "api_url": "https://rseng.github.io/software/api/repos/github/MillionConcepts/lhorizon"}, {"uid": "github/dengzhuo-AI/Real-Fundus", "html_url": "https://rseng.github.io/software/repository/github/dengzhuo-AI/Real-Fundus", "api_url": "https://rseng.github.io/software/api/repos/github/dengzhuo-AI/Real-Fundus"}, {"uid": "github/szwiep/py_SBeLT", "html_url": "https://rseng.github.io/software/repository/github/szwiep/py_SBeLT", "api_url": "https://rseng.github.io/software/api/repos/github/szwiep/py_SBeLT"}, {"uid": "github/jonathansick/MoAstro", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/MoAstro", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/MoAstro"}, {"uid": "github/jonathansick/starfish", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/starfish", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/starfish"}, {"uid": "github/jonathansick/skyoffset", "html_url": "https://rseng.github.io/software/repository/github/jonathansick/skyoffset", "api_url": "https://rseng.github.io/software/api/repos/github/jonathansick/skyoffset"}, {"uid": "github/YuLab-SMU/treeio", "html_url": "https://rseng.github.io/software/repository/github/YuLab-SMU/treeio", "api_url": "https://rseng.github.io/software/api/repos/github/YuLab-SMU/treeio"}, {"uid": "github/GENtle-persons/gentle-m", "html_url": "https://rseng.github.io/software/repository/github/GENtle-persons/gentle-m", "api_url": "https://rseng.github.io/software/api/repos/github/GENtle-persons/gentle-m"}, {"uid": "github/sheneman/clearcut", "html_url": "https://rseng.github.io/software/repository/github/sheneman/clearcut", "api_url": "https://rseng.github.io/software/api/repos/github/sheneman/clearcut"}, {"uid": "github/piernik-dev/piernik", "html_url": "https://rseng.github.io/software/repository/github/piernik-dev/piernik", "api_url": "https://rseng.github.io/software/api/repos/github/piernik-dev/piernik"}, {"uid": "github/BRAIN-TO/GIRFReco.jl", "html_url": "https://rseng.github.io/software/repository/github/BRAIN-TO/GIRFReco.jl", "api_url": "https://rseng.github.io/software/api/repos/github/BRAIN-TO/GIRFReco.jl"}, {"uid": "github/cjneely10/EukMetaSanity", "html_url": "https://rseng.github.io/software/repository/github/cjneely10/EukMetaSanity", "api_url": "https://rseng.github.io/software/api/repos/github/cjneely10/EukMetaSanity"}, {"uid": "github/octapps/octapps", "html_url": "https://rseng.github.io/software/repository/github/octapps/octapps", "api_url": "https://rseng.github.io/software/api/repos/github/octapps/octapps"}, {"uid": "github/uwssg/APS", "html_url": "https://rseng.github.io/software/repository/github/uwssg/APS", "api_url": "https://rseng.github.io/software/api/repos/github/uwssg/APS"}, {"uid": "github/stammler/dustpy", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpy", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpy"}, {"uid": "github/stammler/dustpylib", "html_url": "https://rseng.github.io/software/repository/github/stammler/dustpylib", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/dustpylib"}, {"uid": "github/stammler/simframe", "html_url": "https://rseng.github.io/software/repository/github/stammler/simframe", "api_url": "https://rseng.github.io/software/api/repos/github/stammler/simframe"}, {"uid": "github/MyWebIntelligence/MyWebIntelligencePython", "html_url": "https://rseng.github.io/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", "api_url": "https://rseng.github.io/software/api/repos/github/MyWebIntelligence/MyWebIntelligencePython"}, {"uid": "github/Wytamma/snk", "html_url": "https://rseng.github.io/software/repository/github/Wytamma/snk", "api_url": "https://rseng.github.io/software/api/repos/github/Wytamma/snk"}, {"uid": "github/bacpop/ska.rust", "html_url": "https://rseng.github.io/software/repository/github/bacpop/ska.rust", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/ska.rust"}, {"uid": "github/bacpop/PopPUNK", "html_url": "https://rseng.github.io/software/repository/github/bacpop/PopPUNK", "api_url": "https://rseng.github.io/software/api/repos/github/bacpop/PopPUNK"}, {"uid": "github/bcalden/ClusterPyXT", "html_url": "https://rseng.github.io/software/repository/github/bcalden/ClusterPyXT", "api_url": "https://rseng.github.io/software/api/repos/github/bcalden/ClusterPyXT"}, {"uid": "github/NLESC-JCER/QMCTorch", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCTorch", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCTorch"}, {"uid": "github/NLESC-JCER/EigenCuda", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/EigenCuda", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/EigenCuda"}, {"uid": "github/NLESC-JCER/Fortran_Davidson", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/Fortran_Davidson", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/Fortran_Davidson"}, {"uid": "github/NLESC-JCER/QMCblip", "html_url": "https://rseng.github.io/software/repository/github/NLESC-JCER/QMCblip", "api_url": "https://rseng.github.io/software/api/repos/github/NLESC-JCER/QMCblip"}, {"uid": "github/Sarc-Graph/sarcgraph", "html_url": "https://rseng.github.io/software/repository/github/Sarc-Graph/sarcgraph", "api_url": "https://rseng.github.io/software/api/repos/github/Sarc-Graph/sarcgraph"}, {"uid": "github/chenzhaiyu/abspy", "html_url": "https://rseng.github.io/software/repository/github/chenzhaiyu/abspy", "api_url": "https://rseng.github.io/software/api/repos/github/chenzhaiyu/abspy"}, {"uid": "github/Yingjie4Science/SDGdetector", "html_url": "https://rseng.github.io/software/repository/github/Yingjie4Science/SDGdetector", "api_url": "https://rseng.github.io/software/api/repos/github/Yingjie4Science/SDGdetector"}, {"uid": "github/dkoslicki/TAMPA", "html_url": "https://rseng.github.io/software/repository/github/dkoslicki/TAMPA", "api_url": "https://rseng.github.io/software/api/repos/github/dkoslicki/TAMPA"}, {"uid": "github/TRIQS/ctseg", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/ctseg", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/ctseg"}, {"uid": "github/TRIQS/solid_dmft", "html_url": "https://rseng.github.io/software/repository/github/TRIQS/solid_dmft", "api_url": "https://rseng.github.io/software/api/repos/github/TRIQS/solid_dmft"}, {"uid": "github/yangxiaolinyn/Lemon", "html_url": "https://rseng.github.io/software/repository/github/yangxiaolinyn/Lemon", "api_url": "https://rseng.github.io/software/api/repos/github/yangxiaolinyn/Lemon"}, {"uid": "github/montilab/nf-gwas-pipeline", "html_url": "https://rseng.github.io/software/repository/github/montilab/nf-gwas-pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/montilab/nf-gwas-pipeline"}, {"uid": "github/prdm0/ropenblas", "html_url": "https://rseng.github.io/software/repository/github/prdm0/ropenblas", "api_url": "https://rseng.github.io/software/api/repos/github/prdm0/ropenblas"}, {"uid": "github/yungkipreos/Min-CaLM", "html_url": "https://rseng.github.io/software/repository/github/yungkipreos/Min-CaLM", "api_url": "https://rseng.github.io/software/api/repos/github/yungkipreos/Min-CaLM"}, {"uid": "github/lpantano/seqbuster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqbuster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqbuster"}, {"uid": "github/lpantano/seqcluster", "html_url": "https://rseng.github.io/software/repository/github/lpantano/seqcluster", "api_url": "https://rseng.github.io/software/api/repos/github/lpantano/seqcluster"}, {"uid": "github/blebon/directChillFoam", "html_url": "https://rseng.github.io/software/repository/github/blebon/directChillFoam", "api_url": "https://rseng.github.io/software/api/repos/github/blebon/directChillFoam"}, {"uid": "github/andycasey/sick", "html_url": "https://rseng.github.io/software/repository/github/andycasey/sick", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/sick"}, {"uid": "github/andycasey/smhr", "html_url": "https://rseng.github.io/software/repository/github/andycasey/smhr", "api_url": "https://rseng.github.io/software/api/repos/github/andycasey/smhr"}, {"uid": "github/JDabringhausen/BiPoS1", "html_url": "https://rseng.github.io/software/repository/github/JDabringhausen/BiPoS1", "api_url": "https://rseng.github.io/software/api/repos/github/JDabringhausen/BiPoS1"}, {"uid": "github/BioDepot/biodepot-launcher", "html_url": "https://rseng.github.io/software/repository/github/BioDepot/biodepot-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/BioDepot/biodepot-launcher"}, {"uid": "github/hibridon/hibridon", "html_url": "https://rseng.github.io/software/repository/github/hibridon/hibridon", "api_url": "https://rseng.github.io/software/api/repos/github/hibridon/hibridon"}, {"uid": "github/rathnakumars/difference-smoothing", "html_url": "https://rseng.github.io/software/repository/github/rathnakumars/difference-smoothing", "api_url": "https://rseng.github.io/software/api/repos/github/rathnakumars/difference-smoothing"}, {"uid": "github/SterlingYM/astroPIPS", "html_url": "https://rseng.github.io/software/repository/github/SterlingYM/astroPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/SterlingYM/astroPIPS"}, {"uid": "github/jalombar/starsmasher", "html_url": "https://rseng.github.io/software/repository/github/jalombar/starsmasher", "api_url": "https://rseng.github.io/software/api/repos/github/jalombar/starsmasher"}, {"uid": "github/paranoya/population-synthesis-toolkit", "html_url": "https://rseng.github.io/software/repository/github/paranoya/population-synthesis-toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/paranoya/population-synthesis-toolkit"}, {"uid": "github/astrogilda/mirkwood", "html_url": "https://rseng.github.io/software/repository/github/astrogilda/mirkwood", "api_url": "https://rseng.github.io/software/api/repos/github/astrogilda/mirkwood"}, {"uid": "github/chasmani/piecewise-regression", "html_url": "https://rseng.github.io/software/repository/github/chasmani/piecewise-regression", "api_url": "https://rseng.github.io/software/api/repos/github/chasmani/piecewise-regression"}, {"uid": "github/fabiorigamonti/bang", "html_url": "https://rseng.github.io/software/repository/github/fabiorigamonti/bang", "api_url": "https://rseng.github.io/software/api/repos/github/fabiorigamonti/bang"}, {"uid": "github/zpenoyre/OoT", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/OoT", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/OoT"}, {"uid": "github/zpenoyre/CausticFrog", "html_url": "https://rseng.github.io/software/repository/github/zpenoyre/CausticFrog", "api_url": "https://rseng.github.io/software/api/repos/github/zpenoyre/CausticFrog"}, {"uid": "github/agordon/fastx_toolkit", "html_url": "https://rseng.github.io/software/repository/github/agordon/fastx_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/agordon/fastx_toolkit"}, {"uid": "github/jpober/21cmSense", "html_url": "https://rseng.github.io/software/repository/github/jpober/21cmSense", "api_url": "https://rseng.github.io/software/api/repos/github/jpober/21cmSense"}, {"uid": "github/mlarichardson/CosmosCanvas", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/CosmosCanvas", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/CosmosCanvas"}, {"uid": "github/mlarichardson/ramses2hsim", "html_url": "https://rseng.github.io/software/repository/github/mlarichardson/ramses2hsim", "api_url": "https://rseng.github.io/software/api/repos/github/mlarichardson/ramses2hsim"}, {"uid": "github/RitchieLab/hudson", "html_url": "https://rseng.github.io/software/repository/github/RitchieLab/hudson", "api_url": "https://rseng.github.io/software/api/repos/github/RitchieLab/hudson"}, {"uid": "github/jacobblum/simDRIFT", "html_url": "https://rseng.github.io/software/repository/github/jacobblum/simDRIFT", "api_url": "https://rseng.github.io/software/api/repos/github/jacobblum/simDRIFT"}, {"uid": "github/carlacupcake/hashin_shtrikman_mp", "html_url": "https://rseng.github.io/software/repository/github/carlacupcake/hashin_shtrikman_mp", "api_url": "https://rseng.github.io/software/api/repos/github/carlacupcake/hashin_shtrikman_mp"}, {"uid": "github/DavidLapous/multipers", "html_url": "https://rseng.github.io/software/repository/github/DavidLapous/multipers", "api_url": "https://rseng.github.io/software/api/repos/github/DavidLapous/multipers"}, {"uid": "github/BrianAronson/birankr", "html_url": "https://rseng.github.io/software/repository/github/BrianAronson/birankr", "api_url": "https://rseng.github.io/software/api/repos/github/BrianAronson/birankr"}, {"uid": "github/mingzehuang/latentcor", "html_url": "https://rseng.github.io/software/repository/github/mingzehuang/latentcor", "api_url": "https://rseng.github.io/software/api/repos/github/mingzehuang/latentcor"}, {"uid": "github/kircherlab/cfDNA-UniFlow", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/cfDNA-UniFlow", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/cfDNA-UniFlow"}, {"uid": "github/kircherlab/ReMM", "html_url": "https://rseng.github.io/software/repository/github/kircherlab/ReMM", "api_url": "https://rseng.github.io/software/api/repos/github/kircherlab/ReMM"}, {"uid": "github/dirmeier/surjectors", "html_url": "https://rseng.github.io/software/repository/github/dirmeier/surjectors", "api_url": "https://rseng.github.io/software/api/repos/github/dirmeier/surjectors"}, {"uid": "github/sirocco-rt/sirocco", "html_url": "https://rseng.github.io/software/repository/github/sirocco-rt/sirocco", "api_url": "https://rseng.github.io/software/api/repos/github/sirocco-rt/sirocco"}, {"uid": "github/Hoecker-Lab/atligator", "html_url": "https://rseng.github.io/software/repository/github/Hoecker-Lab/atligator", "api_url": "https://rseng.github.io/software/api/repos/github/Hoecker-Lab/atligator"}, {"uid": "github/debian-tex/texlive-nonbin", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/texlive-nonbin", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/texlive-nonbin"}, {"uid": "github/debian-tex/biber", "html_url": "https://rseng.github.io/software/repository/github/debian-tex/biber", "api_url": "https://rseng.github.io/software/api/repos/github/debian-tex/biber"}, {"uid": "github/opencollab/arpack-ng", "html_url": "https://rseng.github.io/software/repository/github/opencollab/arpack-ng", "api_url": "https://rseng.github.io/software/api/repos/github/opencollab/arpack-ng"}, {"uid": "github/radio1988/OneStopRNAseq", "html_url": "https://rseng.github.io/software/repository/github/radio1988/OneStopRNAseq", "api_url": "https://rseng.github.io/software/api/repos/github/radio1988/OneStopRNAseq"}, {"uid": "github/oschwengers/platon", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/platon", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/platon"}, {"uid": "github/oschwengers/referenceseeker", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/referenceseeker", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/referenceseeker"}, {"uid": "github/oschwengers/bakta", "html_url": "https://rseng.github.io/software/repository/github/oschwengers/bakta", "api_url": "https://rseng.github.io/software/api/repos/github/oschwengers/bakta"}, {"uid": "github/ratt-ru/breizorro", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/breizorro", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/breizorro"}, {"uid": "github/ratt-ru/rodrigues", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/rodrigues", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/rodrigues"}, {"uid": "github/ratt-ru/PyMORESANE", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/PyMORESANE", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/PyMORESANE"}, {"uid": "github/ratt-ru/CubiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/CubiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/CubiCal"}, {"uid": "github/ratt-ru/montblanc", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/montblanc", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/montblanc"}, {"uid": "github/ratt-ru/solarkat", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/solarkat", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/solarkat"}, {"uid": "github/ratt-ru/Stimela", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela"}, {"uid": "github/ratt-ru/smops", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/smops", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/smops"}, {"uid": "github/ratt-ru/eidos", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/eidos", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/eidos"}, {"uid": "github/ratt-ru/Stimela-classic", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/Stimela-classic", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/Stimela-classic"}, {"uid": "github/ratt-ru/codex-africanus", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/codex-africanus", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/codex-africanus"}, {"uid": "github/ratt-ru/QuartiCal", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/QuartiCal", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/QuartiCal"}, {"uid": "github/ratt-ru/dask-ms", "html_url": "https://rseng.github.io/software/repository/github/ratt-ru/dask-ms", "api_url": "https://rseng.github.io/software/api/repos/github/ratt-ru/dask-ms"}, {"uid": "github/keckert7/codes", "html_url": "https://rseng.github.io/software/repository/github/keckert7/codes", "api_url": "https://rseng.github.io/software/api/repos/github/keckert7/codes"}, {"uid": "github/JMLascar/SUSHI", "html_url": "https://rseng.github.io/software/repository/github/JMLascar/SUSHI", "api_url": "https://rseng.github.io/software/api/repos/github/JMLascar/SUSHI"}, {"uid": "github/Keck-DataReductionPipelines/KcwiDRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KcwiDRP"}, {"uid": "github/Keck-DataReductionPipelines/KCWI_DRP", "html_url": "https://rseng.github.io/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/Keck-DataReductionPipelines/KCWI_DRP"}, {"uid": "github/ExoCTK/exoctk", "html_url": "https://rseng.github.io/software/repository/github/ExoCTK/exoctk", "api_url": "https://rseng.github.io/software/api/repos/github/ExoCTK/exoctk"}, {"uid": "github/MatthijsHak/MetalDock", "html_url": "https://rseng.github.io/software/repository/github/MatthijsHak/MetalDock", "api_url": "https://rseng.github.io/software/api/repos/github/MatthijsHak/MetalDock"}, {"uid": "github/constantAmateur/SoupX", "html_url": "https://rseng.github.io/software/repository/github/constantAmateur/SoupX", "api_url": "https://rseng.github.io/software/api/repos/github/constantAmateur/SoupX"}, {"uid": "github/amoradinejad/limHaloPT", "html_url": "https://rseng.github.io/software/repository/github/amoradinejad/limHaloPT", "api_url": "https://rseng.github.io/software/api/repos/github/amoradinejad/limHaloPT"}, {"uid": "github/MIC-DKFZ/TractSeg", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/TractSeg", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/TractSeg"}, {"uid": "github/MIC-DKFZ/HD-BET", "html_url": "https://rseng.github.io/software/repository/github/MIC-DKFZ/HD-BET", "api_url": "https://rseng.github.io/software/api/repos/github/MIC-DKFZ/HD-BET"}, {"uid": "github/chainsawriot/oolong", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/oolong", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/oolong"}, {"uid": "github/chainsawriot/sweater", "html_url": "https://rseng.github.io/software/repository/github/chainsawriot/sweater", "api_url": "https://rseng.github.io/software/api/repos/github/chainsawriot/sweater"}, {"uid": "github/trixi-framework/TrixiParticles.jl", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/TrixiParticles.jl", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/TrixiParticles.jl"}, {"uid": "github/trixi-framework/HOHQMesh", "html_url": "https://rseng.github.io/software/repository/github/trixi-framework/HOHQMesh", "api_url": "https://rseng.github.io/software/api/repos/github/trixi-framework/HOHQMesh"}, {"uid": "github/bancaditalia/black-it", "html_url": "https://rseng.github.io/software/repository/github/bancaditalia/black-it", "api_url": "https://rseng.github.io/software/api/repos/github/bancaditalia/black-it"}, {"uid": "github/ComputationalBiomechanicsLab/opensim-creator", "html_url": "https://rseng.github.io/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalBiomechanicsLab/opensim-creator"}, {"uid": "github/logological/gpp", "html_url": "https://rseng.github.io/software/repository/github/logological/gpp", "api_url": "https://rseng.github.io/software/api/repos/github/logological/gpp"}, {"uid": "github/ropenscilabs/allcontributors", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/allcontributors", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/allcontributors"}, {"uid": "github/ropenscilabs/r2readthedocs", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/r2readthedocs", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/r2readthedocs"}, {"uid": "github/ropenscilabs/gendercoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/gendercoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/gendercoder"}, {"uid": "github/ropenscilabs/qcoder", "html_url": "https://rseng.github.io/software/repository/github/ropenscilabs/qcoder", "api_url": "https://rseng.github.io/software/api/repos/github/ropenscilabs/qcoder"}, {"uid": "github/dipangwvu/SPEGID", "html_url": "https://rseng.github.io/software/repository/github/dipangwvu/SPEGID", "api_url": "https://rseng.github.io/software/api/repos/github/dipangwvu/SPEGID"}, {"uid": "github/sahasuparna/DeMoS", "html_url": "https://rseng.github.io/software/repository/github/sahasuparna/DeMoS", "api_url": "https://rseng.github.io/software/api/repos/github/sahasuparna/DeMoS"}, {"uid": "github/Astroua/TurbuStat", "html_url": "https://rseng.github.io/software/repository/github/Astroua/TurbuStat", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/TurbuStat"}, {"uid": "github/Astroua/SCIMES", "html_url": "https://rseng.github.io/software/repository/github/Astroua/SCIMES", "api_url": "https://rseng.github.io/software/api/repos/github/Astroua/SCIMES"}, {"uid": "github/spjuhel/BoARIO", "html_url": "https://rseng.github.io/software/repository/github/spjuhel/BoARIO", "api_url": "https://rseng.github.io/software/api/repos/github/spjuhel/BoARIO"}, {"uid": "github/nanoporetech/ont_fast5_api", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/ont_fast5_api", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/ont_fast5_api"}, {"uid": "github/nanoporetech/flappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/flappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/flappie"}, {"uid": "github/nanoporetech/dorado", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/dorado", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/dorado"}, {"uid": "github/nanoporetech/pomoxis", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pomoxis", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pomoxis"}, {"uid": "github/nanoporetech/pinfish", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pinfish", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pinfish"}, {"uid": "github/nanoporetech/index.html#", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/index.html#", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/index.html#"}, {"uid": "github/nanoporetech/pychopper", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/pychopper", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/pychopper"}, {"uid": "github/nanoporetech/megalodon", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/megalodon", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/megalodon"}, {"uid": "github/nanoporetech/tombo", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/tombo", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/tombo"}, {"uid": "github/nanoporetech/medaka", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/medaka", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/medaka"}, {"uid": "github/nanoporetech/qcat", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/qcat", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/qcat"}, {"uid": "github/nanoporetech/scrappie", "html_url": "https://rseng.github.io/software/repository/github/nanoporetech/scrappie", "api_url": "https://rseng.github.io/software/api/repos/github/nanoporetech/scrappie"}, {"uid": "github/eEcoLiDAR/laserchicken", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/laserchicken", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/laserchicken"}, {"uid": "github/eEcoLiDAR/Laserfarm", "html_url": "https://rseng.github.io/software/repository/github/eEcoLiDAR/Laserfarm", "api_url": "https://rseng.github.io/software/api/repos/github/eEcoLiDAR/Laserfarm"}, {"uid": "github/mkenworthy/exorings", "html_url": "https://rseng.github.io/software/repository/github/mkenworthy/exorings", "api_url": "https://rseng.github.io/software/api/repos/github/mkenworthy/exorings"}, {"uid": "github/tobiasrausch/alfred", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/alfred", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/alfred"}, {"uid": "github/tobiasrausch/lorax", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/lorax", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/lorax"}, {"uid": "github/tobiasrausch/wally", "html_url": "https://rseng.github.io/software/repository/github/tobiasrausch/wally", "api_url": "https://rseng.github.io/software/api/repos/github/tobiasrausch/wally"}, {"uid": "github/hpdps-group/SolarZip", "html_url": "https://rseng.github.io/software/repository/github/hpdps-group/SolarZip", "api_url": "https://rseng.github.io/software/api/repos/github/hpdps-group/SolarZip"}, {"uid": "github/finagle29/DBSP_DRP", "html_url": "https://rseng.github.io/software/repository/github/finagle29/DBSP_DRP", "api_url": "https://rseng.github.io/software/api/repos/github/finagle29/DBSP_DRP"}, {"uid": "github/CornellLabofOrnithology/auk", "html_url": "https://rseng.github.io/software/repository/github/CornellLabofOrnithology/auk", "api_url": "https://rseng.github.io/software/api/repos/github/CornellLabofOrnithology/auk"}, {"uid": "github/MelanieKahl/MechAnalyze", "html_url": "https://rseng.github.io/software/repository/github/MelanieKahl/MechAnalyze", "api_url": "https://rseng.github.io/software/api/repos/github/MelanieKahl/MechAnalyze"}, {"uid": "github/alphaparrot/ExoPlaSim", "html_url": "https://rseng.github.io/software/repository/github/alphaparrot/ExoPlaSim", "api_url": "https://rseng.github.io/software/api/repos/github/alphaparrot/ExoPlaSim"}, {"uid": "github/tinglabs/scAIDE", "html_url": "https://rseng.github.io/software/repository/github/tinglabs/scAIDE", "api_url": "https://rseng.github.io/software/api/repos/github/tinglabs/scAIDE"}, {"uid": "github/nextflow-io/nextflow", "html_url": "https://rseng.github.io/software/repository/github/nextflow-io/nextflow", "api_url": "https://rseng.github.io/software/api/repos/github/nextflow-io/nextflow"}, {"uid": "github/mrilikecoding/StreamPoseML", "html_url": "https://rseng.github.io/software/repository/github/mrilikecoding/StreamPoseML", "api_url": "https://rseng.github.io/software/api/repos/github/mrilikecoding/StreamPoseML"}, {"uid": "github/vocalpy/crowsetta", "html_url": "https://rseng.github.io/software/repository/github/vocalpy/crowsetta", "api_url": "https://rseng.github.io/software/api/repos/github/vocalpy/crowsetta"}, {"uid": "github/simpeg/aurora", "html_url": "https://rseng.github.io/software/repository/github/simpeg/aurora", "api_url": "https://rseng.github.io/software/api/repos/github/simpeg/aurora"}, {"uid": "github/highamm/sptotal", "html_url": "https://rseng.github.io/software/repository/github/highamm/sptotal", "api_url": "https://rseng.github.io/software/api/repos/github/highamm/sptotal"}, {"uid": "github/samhforbes/PupillometryR", "html_url": "https://rseng.github.io/software/repository/github/samhforbes/PupillometryR", "api_url": "https://rseng.github.io/software/api/repos/github/samhforbes/PupillometryR"}, {"uid": "github/JustinYKC/FEPOPS", "html_url": "https://rseng.github.io/software/repository/github/JustinYKC/FEPOPS", "api_url": "https://rseng.github.io/software/api/repos/github/JustinYKC/FEPOPS"}, {"uid": "github/optimusmoose/jsms", "html_url": "https://rseng.github.io/software/repository/github/optimusmoose/jsms", "api_url": "https://rseng.github.io/software/api/repos/github/optimusmoose/jsms"}, {"uid": "github/madupite/madupite", "html_url": "https://rseng.github.io/software/repository/github/madupite/madupite", "api_url": "https://rseng.github.io/software/api/repos/github/madupite/madupite"}, {"uid": "github/kitokamada/QUIDS", "html_url": "https://rseng.github.io/software/repository/github/kitokamada/QUIDS", "api_url": "https://rseng.github.io/software/api/repos/github/kitokamada/QUIDS"}, {"uid": "github/pytoolz/toolz", "html_url": "https://rseng.github.io/software/repository/github/pytoolz/toolz", "api_url": "https://rseng.github.io/software/api/repos/github/pytoolz/toolz"}, {"uid": "github/BobAubouin/Python_Anesthesia_Simulator", "html_url": "https://rseng.github.io/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/BobAubouin/Python_Anesthesia_Simulator"}, {"uid": "github/rhenkin/visxhclust", "html_url": "https://rseng.github.io/software/repository/github/rhenkin/visxhclust", "api_url": "https://rseng.github.io/software/api/repos/github/rhenkin/visxhclust"}, {"uid": "github/optuna/optuna", "html_url": "https://rseng.github.io/software/repository/github/optuna/optuna", "api_url": "https://rseng.github.io/software/api/repos/github/optuna/optuna"}, {"uid": "github/egonw/bacting", "html_url": "https://rseng.github.io/software/repository/github/egonw/bacting", "api_url": "https://rseng.github.io/software/api/repos/github/egonw/bacting"}, {"uid": "github/ziotom78/libpolycomp", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/libpolycomp", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/libpolycomp"}, {"uid": "github/ziotom78/dacapo_calibration", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/dacapo_calibration", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/dacapo_calibration"}, {"uid": "github/ziotom78/Healpix.jl", "html_url": "https://rseng.github.io/software/repository/github/ziotom78/Healpix.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ziotom78/Healpix.jl"}, {"uid": "github/eelregit/covdisc", "html_url": "https://rseng.github.io/software/repository/github/eelregit/covdisc", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/covdisc"}, {"uid": "github/eelregit/mcfit", "html_url": "https://rseng.github.io/software/repository/github/eelregit/mcfit", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/mcfit"}, {"uid": "github/eelregit/pmwd", "html_url": "https://rseng.github.io/software/repository/github/eelregit/pmwd", "api_url": "https://rseng.github.io/software/api/repos/github/eelregit/pmwd"}, {"uid": "github/pfaucon/PBSIM-PacBio-Simulator", "html_url": "https://rseng.github.io/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", "api_url": "https://rseng.github.io/software/api/repos/github/pfaucon/PBSIM-PacBio-Simulator"}, {"uid": "github/JulienPeloton/lenscov", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/lenscov", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/lenscov"}, {"uid": "github/JulienPeloton/s4cmb", "html_url": "https://rseng.github.io/software/repository/github/JulienPeloton/s4cmb", "api_url": "https://rseng.github.io/software/api/repos/github/JulienPeloton/s4cmb"}, {"uid": "github/mraveri/tensiometer", "html_url": "https://rseng.github.io/software/repository/github/mraveri/tensiometer", "api_url": "https://rseng.github.io/software/api/repos/github/mraveri/tensiometer"}, {"uid": "github/mggg/ecological-inference", "html_url": "https://rseng.github.io/software/repository/github/mggg/ecological-inference", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/ecological-inference"}, {"uid": "github/mggg/votekit", "html_url": "https://rseng.github.io/software/repository/github/mggg/votekit", "api_url": "https://rseng.github.io/software/api/repos/github/mggg/votekit"}, {"uid": "github/mlegr/EqualISER", "html_url": "https://rseng.github.io/software/repository/github/mlegr/EqualISER", "api_url": "https://rseng.github.io/software/api/repos/github/mlegr/EqualISER"}, {"uid": "github/damar-wicaksono/uqtestfuns", "html_url": "https://rseng.github.io/software/repository/github/damar-wicaksono/uqtestfuns", "api_url": "https://rseng.github.io/software/api/repos/github/damar-wicaksono/uqtestfuns"}, {"uid": "github/johnpaulett/python-hl7", "html_url": "https://rseng.github.io/software/repository/github/johnpaulett/python-hl7", "api_url": "https://rseng.github.io/software/api/repos/github/johnpaulett/python-hl7"}, {"uid": "github/BonsonW/slow5curl", "html_url": "https://rseng.github.io/software/repository/github/BonsonW/slow5curl", "api_url": "https://rseng.github.io/software/api/repos/github/BonsonW/slow5curl"}, {"uid": "github/ejsafron/SATCHEL", "html_url": "https://rseng.github.io/software/repository/github/ejsafron/SATCHEL", "api_url": "https://rseng.github.io/software/api/repos/github/ejsafron/SATCHEL"}, {"uid": "github/guillochon/MOSFiT", "html_url": "https://rseng.github.io/software/repository/github/guillochon/MOSFiT", "api_url": "https://rseng.github.io/software/api/repos/github/guillochon/MOSFiT"}, {"uid": "github/pierrebarbera/epa-ng", "html_url": "https://rseng.github.io/software/repository/github/pierrebarbera/epa-ng", "api_url": "https://rseng.github.io/software/api/repos/github/pierrebarbera/epa-ng"}, {"uid": "github/ArtRand/signalAlign", "html_url": "https://rseng.github.io/software/repository/github/ArtRand/signalAlign", "api_url": "https://rseng.github.io/software/api/repos/github/ArtRand/signalAlign"}, {"uid": "github/ntoles/tristan-mp-pitp", "html_url": "https://rseng.github.io/software/repository/github/ntoles/tristan-mp-pitp", "api_url": "https://rseng.github.io/software/api/repos/github/ntoles/tristan-mp-pitp"}, {"uid": "github/ECP-copa/Cabana", "html_url": "https://rseng.github.io/software/repository/github/ECP-copa/Cabana", "api_url": "https://rseng.github.io/software/api/repos/github/ECP-copa/Cabana"}, {"uid": "github/CLARIAH/grlc", "html_url": "https://rseng.github.io/software/repository/github/CLARIAH/grlc", "api_url": "https://rseng.github.io/software/api/repos/github/CLARIAH/grlc"}, {"uid": "github/AgatheSenellart/MultiVae", "html_url": "https://rseng.github.io/software/repository/github/AgatheSenellart/MultiVae", "api_url": "https://rseng.github.io/software/api/repos/github/AgatheSenellart/MultiVae"}, {"uid": "github/kingyin3613/RingsPy", "html_url": "https://rseng.github.io/software/repository/github/kingyin3613/RingsPy", "api_url": "https://rseng.github.io/software/api/repos/github/kingyin3613/RingsPy"}, {"uid": "github/MolMeDB/MolMeDB", "html_url": "https://rseng.github.io/software/repository/github/MolMeDB/MolMeDB", "api_url": "https://rseng.github.io/software/api/repos/github/MolMeDB/MolMeDB"}, {"uid": "github/wangjun1996/VisFeature", "html_url": "https://rseng.github.io/software/repository/github/wangjun1996/VisFeature", "api_url": "https://rseng.github.io/software/api/repos/github/wangjun1996/VisFeature"}, {"uid": "github/cjtu/craterpy", "html_url": "https://rseng.github.io/software/repository/github/cjtu/craterpy", "api_url": "https://rseng.github.io/software/api/repos/github/cjtu/craterpy"}, {"uid": "github/rformassspectrometry/SpectriPy", "html_url": "https://rseng.github.io/software/repository/github/rformassspectrometry/SpectriPy", "api_url": "https://rseng.github.io/software/api/repos/github/rformassspectrometry/SpectriPy"}, {"uid": "github/ulebreui/shark", "html_url": "https://rseng.github.io/software/repository/github/ulebreui/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ulebreui/shark"}, {"uid": "github/mihanke/athos", "html_url": "https://rseng.github.io/software/repository/github/mihanke/athos", "api_url": "https://rseng.github.io/software/api/repos/github/mihanke/athos"}, {"uid": "github/bxia888/CEFCIG", "html_url": "https://rseng.github.io/software/repository/github/bxia888/CEFCIG", "api_url": "https://rseng.github.io/software/api/repos/github/bxia888/CEFCIG"}, {"uid": "github/mrtommyb/ktransit", "html_url": "https://rseng.github.io/software/repository/github/mrtommyb/ktransit", "api_url": "https://rseng.github.io/software/api/repos/github/mrtommyb/ktransit"}, {"uid": "github/remi-adam/minot", "html_url": "https://rseng.github.io/software/repository/github/remi-adam/minot", "api_url": "https://rseng.github.io/software/api/repos/github/remi-adam/minot"}, {"uid": "github/SISPO-developers/sispo", "html_url": "https://rseng.github.io/software/repository/github/SISPO-developers/sispo", "api_url": "https://rseng.github.io/software/api/repos/github/SISPO-developers/sispo"}, {"uid": "github/rkkuang/triplelens", "html_url": "https://rseng.github.io/software/repository/github/rkkuang/triplelens", "api_url": "https://rseng.github.io/software/api/repos/github/rkkuang/triplelens"}, {"uid": "github/deepsphere/deepsphere-cosmo-tf1", "html_url": "https://rseng.github.io/software/repository/github/deepsphere/deepsphere-cosmo-tf1", "api_url": "https://rseng.github.io/software/api/repos/github/deepsphere/deepsphere-cosmo-tf1"}, {"uid": "github/austinpeel/herculens", "html_url": "https://rseng.github.io/software/repository/github/austinpeel/herculens", "api_url": "https://rseng.github.io/software/api/repos/github/austinpeel/herculens"}, {"uid": "github/bcbio/bcbio-nextgen", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio-nextgen", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio-nextgen"}, {"uid": "github/bcbio/bcbio.variation.recall", "html_url": "https://rseng.github.io/software/repository/github/bcbio/bcbio.variation.recall", "api_url": "https://rseng.github.io/software/api/repos/github/bcbio/bcbio.variation.recall"}, {"uid": "github/jsh58/Genrich", "html_url": "https://rseng.github.io/software/repository/github/jsh58/Genrich", "api_url": "https://rseng.github.io/software/api/repos/github/jsh58/Genrich"}, {"uid": "github/RandyRDavila/GraphCalc", "html_url": "https://rseng.github.io/software/repository/github/RandyRDavila/GraphCalc", "api_url": "https://rseng.github.io/software/api/repos/github/RandyRDavila/GraphCalc"}, {"uid": "github/rahil-makadia/grss", "html_url": "https://rseng.github.io/software/repository/github/rahil-makadia/grss", "api_url": "https://rseng.github.io/software/api/repos/github/rahil-makadia/grss"}, {"uid": "github/cdslaborg/paramonte", "html_url": "https://rseng.github.io/software/repository/github/cdslaborg/paramonte", "api_url": "https://rseng.github.io/software/api/repos/github/cdslaborg/paramonte"}, {"uid": "github/AMReX-Combustion/PeleLMeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Combustion/PeleLMeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Combustion/PeleLMeX"}, {"uid": "github/traja-team/traja", "html_url": "https://rseng.github.io/software/repository/github/traja-team/traja", "api_url": "https://rseng.github.io/software/api/repos/github/traja-team/traja"}, {"uid": "github/PyDL/cat-puma", "html_url": "https://rseng.github.io/software/repository/github/PyDL/cat-puma", "api_url": "https://rseng.github.io/software/api/repos/github/PyDL/cat-puma"}, {"uid": "github/dparkins/CosmoNest", "html_url": "https://rseng.github.io/software/repository/github/dparkins/CosmoNest", "api_url": "https://rseng.github.io/software/api/repos/github/dparkins/CosmoNest"}, {"uid": "github/sbird/fake_spectra", "html_url": "https://rseng.github.io/software/repository/github/sbird/fake_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/fake_spectra"}, {"uid": "github/sbird/GenPK", "html_url": "https://rseng.github.io/software/repository/github/sbird/GenPK", "api_url": "https://rseng.github.io/software/api/repos/github/sbird/GenPK"}, {"uid": "github/emrecdem/emo-spectre", "html_url": "https://rseng.github.io/software/repository/github/emrecdem/emo-spectre", "api_url": "https://rseng.github.io/software/api/repos/github/emrecdem/emo-spectre"}, {"uid": "github/MikeSWang/Triumvirate", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Triumvirate", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Triumvirate"}, {"uid": "github/MikeSWang/Harmonia", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/Harmonia", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/Harmonia"}, {"uid": "github/MikeSWang/HorizonGRound", "html_url": "https://rseng.github.io/software/repository/github/MikeSWang/HorizonGRound", "api_url": "https://rseng.github.io/software/api/repos/github/MikeSWang/HorizonGRound"}, {"uid": "github/martinsparre/XSHPipelineManager", "html_url": "https://rseng.github.io/software/repository/github/martinsparre/XSHPipelineManager", "api_url": "https://rseng.github.io/software/api/repos/github/martinsparre/XSHPipelineManager"}, {"uid": "github/biboyd/SALSA", "html_url": "https://rseng.github.io/software/repository/github/biboyd/SALSA", "api_url": "https://rseng.github.io/software/api/repos/github/biboyd/SALSA"}, {"uid": "github/barricklab/pLannotate", "html_url": "https://rseng.github.io/software/repository/github/barricklab/pLannotate", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/pLannotate"}, {"uid": "github/barricklab/seabreeze", "html_url": "https://rseng.github.io/software/repository/github/barricklab/seabreeze", "api_url": "https://rseng.github.io/software/api/repos/github/barricklab/seabreeze"}, {"uid": "github/JuliaSmoothOptimizers/DCISolver.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/DCISolver.jl"}, {"uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaSmoothOptimizers/PDENLPModels.jl"}, {"uid": "github/galaxyproject/ansible-tiaas2", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/ansible-tiaas2", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/ansible-tiaas2"}, {"uid": "github/galaxyproject/galaxy-lib", "html_url": "https://rseng.github.io/software/repository/github/galaxyproject/galaxy-lib", "api_url": "https://rseng.github.io/software/api/repos/github/galaxyproject/galaxy-lib"}, {"uid": "github/KCL-BMEIS/NiftySeg", "html_url": "https://rseng.github.io/software/repository/github/KCL-BMEIS/NiftySeg", "api_url": "https://rseng.github.io/software/api/repos/github/KCL-BMEIS/NiftySeg"}, {"uid": "github/QCUncertainty/sigma", "html_url": "https://rseng.github.io/software/repository/github/QCUncertainty/sigma", "api_url": "https://rseng.github.io/software/api/repos/github/QCUncertainty/sigma"}, {"uid": "github/hamers/secularmultiple", "html_url": "https://rseng.github.io/software/repository/github/hamers/secularmultiple", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/secularmultiple"}, {"uid": "github/hamers/tpi", "html_url": "https://rseng.github.io/software/repository/github/hamers/tpi", "api_url": "https://rseng.github.io/software/api/repos/github/hamers/tpi"}, {"uid": "github/churchmanlab/genewalk", "html_url": "https://rseng.github.io/software/repository/github/churchmanlab/genewalk", "api_url": "https://rseng.github.io/software/api/repos/github/churchmanlab/genewalk"}, {"uid": "github/KarrLab/de_sim", "html_url": "https://rseng.github.io/software/repository/github/KarrLab/de_sim", "api_url": "https://rseng.github.io/software/api/repos/github/KarrLab/de_sim"}, {"uid": "github/LoganAMorrison/Hazma", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/Hazma", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/Hazma"}, {"uid": "github/LoganAMorrison/blackthorn", "html_url": "https://rseng.github.io/software/repository/github/LoganAMorrison/blackthorn", "api_url": "https://rseng.github.io/software/api/repos/github/LoganAMorrison/blackthorn"}, {"uid": "github/steven-murray/powerbox", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/powerbox", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/powerbox"}, {"uid": "github/steven-murray/mrpy", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/mrpy", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/mrpy"}, {"uid": "github/steven-murray/pydftools", "html_url": "https://rseng.github.io/software/repository/github/steven-murray/pydftools", "api_url": "https://rseng.github.io/software/api/repos/github/steven-murray/pydftools"}, {"uid": "github/rust-bio/rust-bio-tools", "html_url": "https://rseng.github.io/software/repository/github/rust-bio/rust-bio-tools", "api_url": "https://rseng.github.io/software/api/repos/github/rust-bio/rust-bio-tools"}, {"uid": "github/SCIInstitute/UncertainSCI", "html_url": "https://rseng.github.io/software/repository/github/SCIInstitute/UncertainSCI", "api_url": "https://rseng.github.io/software/api/repos/github/SCIInstitute/UncertainSCI"}, {"uid": "github/eas342/tshirt", "html_url": "https://rseng.github.io/software/repository/github/eas342/tshirt", "api_url": "https://rseng.github.io/software/api/repos/github/eas342/tshirt"}, {"uid": "github/mzechmeister/serval", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/serval", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/serval"}, {"uid": "github/mzechmeister/viper", "html_url": "https://rseng.github.io/software/repository/github/mzechmeister/viper", "api_url": "https://rseng.github.io/software/api/repos/github/mzechmeister/viper"}, {"uid": "github/philbull/RadioFisher", "html_url": "https://rseng.github.io/software/repository/github/philbull/RadioFisher", "api_url": "https://rseng.github.io/software/api/repos/github/philbull/RadioFisher"}, {"uid": "github/brunettsp/myosothes", "html_url": "https://rseng.github.io/software/repository/github/brunettsp/myosothes", "api_url": "https://rseng.github.io/software/api/repos/github/brunettsp/myosothes"}, {"uid": "github/mwoodbri/MRIdb", "html_url": "https://rseng.github.io/software/repository/github/mwoodbri/MRIdb", "api_url": "https://rseng.github.io/software/api/repos/github/mwoodbri/MRIdb"}, {"uid": "github/WatsonLab/MAGpy", "html_url": "https://rseng.github.io/software/repository/github/WatsonLab/MAGpy", "api_url": "https://rseng.github.io/software/api/repos/github/WatsonLab/MAGpy"}, {"uid": "github/jobovy/stream-stream", "html_url": "https://rseng.github.io/software/repository/github/jobovy/stream-stream", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/stream-stream"}, {"uid": "github/jobovy/streamgap-pepper", "html_url": "https://rseng.github.io/software/repository/github/jobovy/streamgap-pepper", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/streamgap-pepper"}, {"uid": "github/jobovy/apogee", "html_url": "https://rseng.github.io/software/repository/github/jobovy/apogee", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/apogee"}, {"uid": "github/jobovy/segueSelect", "html_url": "https://rseng.github.io/software/repository/github/jobovy/segueSelect", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/segueSelect"}, {"uid": "github/jobovy/simple-m2m", "html_url": "https://rseng.github.io/software/repository/github/jobovy/simple-m2m", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/simple-m2m"}, {"uid": "github/jobovy/galpy", "html_url": "https://rseng.github.io/software/repository/github/jobovy/galpy", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/galpy"}, {"uid": "github/jobovy/gaia_tools", "html_url": "https://rseng.github.io/software/repository/github/jobovy/gaia_tools", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/gaia_tools"}, {"uid": "github/jobovy/extreme-deconvolution", "html_url": "https://rseng.github.io/software/repository/github/jobovy/extreme-deconvolution", "api_url": "https://rseng.github.io/software/api/repos/github/jobovy/extreme-deconvolution"}, {"uid": "github/TommasoRonconi/scampy", "html_url": "https://rseng.github.io/software/repository/github/TommasoRonconi/scampy", "api_url": "https://rseng.github.io/software/api/repos/github/TommasoRonconi/scampy"}, {"uid": "github/astroCV/astroCV", "html_url": "https://rseng.github.io/software/repository/github/astroCV/astroCV", "api_url": "https://rseng.github.io/software/api/repos/github/astroCV/astroCV"}, {"uid": "github/idaholab/moose", "html_url": "https://rseng.github.io/software/repository/github/idaholab/moose", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/moose"}, {"uid": "github/idaholab/MontePy", "html_url": "https://rseng.github.io/software/repository/github/idaholab/MontePy", "api_url": "https://rseng.github.io/software/api/repos/github/idaholab/MontePy"}, {"uid": "github/extendr/extendr", "html_url": "https://rseng.github.io/software/repository/github/extendr/extendr", "api_url": "https://rseng.github.io/software/api/repos/github/extendr/extendr"}, {"uid": "github/UFParLab/aces4", "html_url": "https://rseng.github.io/software/repository/github/UFParLab/aces4", "api_url": "https://rseng.github.io/software/api/repos/github/UFParLab/aces4"}, {"uid": "github/CEED/libCEED", "html_url": "https://rseng.github.io/software/repository/github/CEED/libCEED", "api_url": "https://rseng.github.io/software/api/repos/github/CEED/libCEED"}, {"uid": "github/landlab/landlab", "html_url": "https://rseng.github.io/software/repository/github/landlab/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/landlab/landlab"}, {"uid": "github/hnikaein/stark", "html_url": "https://rseng.github.io/software/repository/github/hnikaein/stark", "api_url": "https://rseng.github.io/software/api/repos/github/hnikaein/stark"}, {"uid": "github/grant-m-s/astronomicAL", "html_url": "https://rseng.github.io/software/repository/github/grant-m-s/astronomicAL", "api_url": "https://rseng.github.io/software/api/repos/github/grant-m-s/astronomicAL"}, {"uid": "github/johnlee4/CoCoCoNet", "html_url": "https://rseng.github.io/software/repository/github/johnlee4/CoCoCoNet", "api_url": "https://rseng.github.io/software/api/repos/github/johnlee4/CoCoCoNet"}, {"uid": "github/zdelrosario/py_grama", "html_url": "https://rseng.github.io/software/repository/github/zdelrosario/py_grama", "api_url": "https://rseng.github.io/software/api/repos/github/zdelrosario/py_grama"}, {"uid": "github/ofionnad/radiowinds", "html_url": "https://rseng.github.io/software/repository/github/ofionnad/radiowinds", "api_url": "https://rseng.github.io/software/api/repos/github/ofionnad/radiowinds"}, {"uid": "github/glotzerlab/freud", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/freud", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/freud"}, {"uid": "github/glotzerlab/hoomd-blue", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/hoomd-blue", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/hoomd-blue"}, {"uid": "github/glotzerlab/coxeter", "html_url": "https://rseng.github.io/software/repository/github/glotzerlab/coxeter", "api_url": "https://rseng.github.io/software/api/repos/github/glotzerlab/coxeter"}, {"uid": "github/DLR-AMR/t8code", "html_url": "https://rseng.github.io/software/repository/github/DLR-AMR/t8code", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-AMR/t8code"}, {"uid": "github/mostanes/umbrella2", "html_url": "https://rseng.github.io/software/repository/github/mostanes/umbrella2", "api_url": "https://rseng.github.io/software/api/repos/github/mostanes/umbrella2"}, {"uid": "github/Jinsl-lab/SDImpute", "html_url": "https://rseng.github.io/software/repository/github/Jinsl-lab/SDImpute", "api_url": "https://rseng.github.io/software/api/repos/github/Jinsl-lab/SDImpute"}, {"uid": "github/UTEL-UIUC/gtfs_segments", "html_url": "https://rseng.github.io/software/repository/github/UTEL-UIUC/gtfs_segments", "api_url": "https://rseng.github.io/software/api/repos/github/UTEL-UIUC/gtfs_segments"}, {"uid": "github/cas-bioinf/rboAnalyzer", "html_url": "https://rseng.github.io/software/repository/github/cas-bioinf/rboAnalyzer", "api_url": "https://rseng.github.io/software/api/repos/github/cas-bioinf/rboAnalyzer"}, {"uid": "github/hemantaph/ler", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/ler", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/ler"}, {"uid": "github/hemantaph/gwsnr", "html_url": "https://rseng.github.io/software/repository/github/hemantaph/gwsnr", "api_url": "https://rseng.github.io/software/api/repos/github/hemantaph/gwsnr"}, {"uid": "github/DJArmstrong/TransitSOM", "html_url": "https://rseng.github.io/software/repository/github/DJArmstrong/TransitSOM", "api_url": "https://rseng.github.io/software/api/repos/github/DJArmstrong/TransitSOM"}, {"uid": "github/H-E-L-P/XID_plus", "html_url": "https://rseng.github.io/software/repository/github/H-E-L-P/XID_plus", "api_url": "https://rseng.github.io/software/api/repos/github/H-E-L-P/XID_plus"}, {"uid": "github/jpcoles/mosaic", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/mosaic"}, {"uid": "github/jpcoles/glass", "html_url": "https://rseng.github.io/software/repository/github/jpcoles/glass", "api_url": "https://rseng.github.io/software/api/repos/github/jpcoles/glass"}, {"uid": "github/DLR-RM/BlenderProc", "html_url": "https://rseng.github.io/software/repository/github/DLR-RM/BlenderProc", "api_url": "https://rseng.github.io/software/api/repos/github/DLR-RM/BlenderProc"}, {"uid": "github/weizhouUMICH/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/weizhouUMICH/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/weizhouUMICH/SAIGE"}, {"uid": "github/jorgefz/photoevolver", "html_url": "https://rseng.github.io/software/repository/github/jorgefz/photoevolver", "api_url": "https://rseng.github.io/software/api/repos/github/jorgefz/photoevolver"}, {"uid": "github/lzx325/DeeReCT-APA-repo", "html_url": "https://rseng.github.io/software/repository/github/lzx325/DeeReCT-APA-repo", "api_url": "https://rseng.github.io/software/api/repos/github/lzx325/DeeReCT-APA-repo"}, {"uid": "github/kimberg/voxbo", "html_url": "https://rseng.github.io/software/repository/github/kimberg/voxbo", "api_url": "https://rseng.github.io/software/api/repos/github/kimberg/voxbo"}, {"uid": "github/GooglingTheCancerGenome/sv-gen", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-gen", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-gen"}, {"uid": "github/GooglingTheCancerGenome/sv-callers", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-callers", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-callers"}, {"uid": "github/GooglingTheCancerGenome/sv-channels", "html_url": "https://rseng.github.io/software/repository/github/GooglingTheCancerGenome/sv-channels", "api_url": "https://rseng.github.io/software/api/repos/github/GooglingTheCancerGenome/sv-channels"}, {"uid": "github/fuyw-aisw/GALA", "html_url": "https://rseng.github.io/software/repository/github/fuyw-aisw/GALA", "api_url": "https://rseng.github.io/software/api/repos/github/fuyw-aisw/GALA"}, {"uid": "github/NETL-RIC/URC-Assessment-Method", "html_url": "https://rseng.github.io/software/repository/github/NETL-RIC/URC-Assessment-Method", "api_url": "https://rseng.github.io/software/api/repos/github/NETL-RIC/URC-Assessment-Method"}, {"uid": "github/T0ngChen/medRCT", "html_url": "https://rseng.github.io/software/repository/github/T0ngChen/medRCT", "api_url": "https://rseng.github.io/software/api/repos/github/T0ngChen/medRCT"}, {"uid": "github/VBlesius/RHRT", "html_url": "https://rseng.github.io/software/repository/github/VBlesius/RHRT", "api_url": "https://rseng.github.io/software/api/repos/github/VBlesius/RHRT"}, {"uid": "github/yogi-tud/space_gpu", "html_url": "https://rseng.github.io/software/repository/github/yogi-tud/space_gpu", "api_url": "https://rseng.github.io/software/api/repos/github/yogi-tud/space_gpu"}, {"uid": "github/mkargo/pipeline", "html_url": "https://rseng.github.io/software/repository/github/mkargo/pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mkargo/pipeline"}, {"uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", "html_url": "https://rseng.github.io/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/IlianPihlajamaa/ModeCouplingTheory.jl"}, {"uid": "github/21cmFAST/21cmFAST", "html_url": "https://rseng.github.io/software/repository/github/21cmFAST/21cmFAST", "api_url": "https://rseng.github.io/software/api/repos/github/21cmFAST/21cmFAST"}, {"uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "html_url": "https://rseng.github.io/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", "api_url": "https://rseng.github.io/software/api/repos/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner"}, {"uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/BC_Intrinsic_subtyping"}, {"uid": "github/DEIB-GECO/MutViz", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/MutViz", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/MutViz"}, {"uid": "github/DEIB-GECO/CRIS_single-sample", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CRIS_single-sample", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CRIS_single-sample"}, {"uid": "github/DEIB-GECO/GeneNetFusion", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/GeneNetFusion", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/GeneNetFusion"}, {"uid": "github/DEIB-GECO/flu-warning-system", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/flu-warning-system", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/flu-warning-system"}, {"uid": "github/DEIB-GECO/CombSAFE", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/CombSAFE", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/CombSAFE"}, {"uid": "github/DEIB-GECO/genereg", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/genereg", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/genereg"}, {"uid": "github/DEIB-GECO/ReRa", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/ReRa", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/ReRa"}, {"uid": "github/DEIB-GECO/VarSum", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/VarSum", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/VarSum"}, {"uid": "github/DEIB-GECO/OpenGDC", "html_url": "https://rseng.github.io/software/repository/github/DEIB-GECO/OpenGDC", "api_url": "https://rseng.github.io/software/api/repos/github/DEIB-GECO/OpenGDC"}, {"uid": "github/OPUS-MaLab/opus_fold3", "html_url": "https://rseng.github.io/software/repository/github/OPUS-MaLab/opus_fold3", "api_url": "https://rseng.github.io/software/api/repos/github/OPUS-MaLab/opus_fold3"}, {"uid": "github/DrJCarson/BoundedCoalescent", "html_url": "https://rseng.github.io/software/repository/github/DrJCarson/BoundedCoalescent", "api_url": "https://rseng.github.io/software/api/repos/github/DrJCarson/BoundedCoalescent"}, {"uid": "github/vanheeringen-lab/gimmemotifs", "html_url": "https://rseng.github.io/software/repository/github/vanheeringen-lab/gimmemotifs", "api_url": "https://rseng.github.io/software/api/repos/github/vanheeringen-lab/gimmemotifs"}, {"uid": "github/cmillion/gPhoton", "html_url": "https://rseng.github.io/software/repository/github/cmillion/gPhoton", "api_url": "https://rseng.github.io/software/api/repos/github/cmillion/gPhoton"}, {"uid": "github/Heldenkombinat/Logodetect", "html_url": "https://rseng.github.io/software/repository/github/Heldenkombinat/Logodetect", "api_url": "https://rseng.github.io/software/api/repos/github/Heldenkombinat/Logodetect"}, {"uid": "github/ferdymercury/amide", "html_url": "https://rseng.github.io/software/repository/github/ferdymercury/amide", "api_url": "https://rseng.github.io/software/api/repos/github/ferdymercury/amide"}, {"uid": "github/MeasureTransport/MParT", "html_url": "https://rseng.github.io/software/repository/github/MeasureTransport/MParT", "api_url": "https://rseng.github.io/software/api/repos/github/MeasureTransport/MParT"}, {"uid": "github/webbjj/clustertools", "html_url": "https://rseng.github.io/software/repository/github/webbjj/clustertools", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/clustertools"}, {"uid": "github/webbjj/m2mcluster", "html_url": "https://rseng.github.io/software/repository/github/webbjj/m2mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/webbjj/m2mcluster"}, {"uid": "github/smeingast/PNICER", "html_url": "https://rseng.github.io/software/repository/github/smeingast/PNICER", "api_url": "https://rseng.github.io/software/api/repos/github/smeingast/PNICER"}, {"uid": "github/thomaswilliamsastro/mcfine", "html_url": "https://rseng.github.io/software/repository/github/thomaswilliamsastro/mcfine", "api_url": "https://rseng.github.io/software/api/repos/github/thomaswilliamsastro/mcfine"}, {"uid": "github/secastel/phaser", "html_url": "https://rseng.github.io/software/repository/github/secastel/phaser", "api_url": "https://rseng.github.io/software/api/repos/github/secastel/phaser"}, {"uid": "github/tornede/py_experimenter", "html_url": "https://rseng.github.io/software/repository/github/tornede/py_experimenter", "api_url": "https://rseng.github.io/software/api/repos/github/tornede/py_experimenter"}, {"uid": "github/rossjturner/RAiSERed", "html_url": "https://rseng.github.io/software/repository/github/rossjturner/RAiSERed", "api_url": "https://rseng.github.io/software/api/repos/github/rossjturner/RAiSERed"}, {"uid": "github/snakemake/snakemake", "html_url": "https://rseng.github.io/software/repository/github/snakemake/snakemake", "api_url": "https://rseng.github.io/software/api/repos/github/snakemake/snakemake"}, {"uid": "github/grzeimann/Diagnose", "html_url": "https://rseng.github.io/software/repository/github/grzeimann/Diagnose", "api_url": "https://rseng.github.io/software/api/repos/github/grzeimann/Diagnose"}, {"uid": "github/barbagroup/geoclaw-landspill", "html_url": "https://rseng.github.io/software/repository/github/barbagroup/geoclaw-landspill", "api_url": "https://rseng.github.io/software/api/repos/github/barbagroup/geoclaw-landspill"}, {"uid": "github/vidakris/flatwrm", "html_url": "https://rseng.github.io/software/repository/github/vidakris/flatwrm", "api_url": "https://rseng.github.io/software/api/repos/github/vidakris/flatwrm"}, {"uid": "github/jmschrei/pomegranate", "html_url": "https://rseng.github.io/software/repository/github/jmschrei/pomegranate", "api_url": "https://rseng.github.io/software/api/repos/github/jmschrei/pomegranate"}, {"uid": "github/SHF-NAILResearchGroup/HINA", "html_url": "https://rseng.github.io/software/repository/github/SHF-NAILResearchGroup/HINA", "api_url": "https://rseng.github.io/software/api/repos/github/SHF-NAILResearchGroup/HINA"}, {"uid": "github/philippbaumeister/ExoMDN", "html_url": "https://rseng.github.io/software/repository/github/philippbaumeister/ExoMDN", "api_url": "https://rseng.github.io/software/api/repos/github/philippbaumeister/ExoMDN"}, {"uid": "github/cwentland0/perform", "html_url": "https://rseng.github.io/software/repository/github/cwentland0/perform", "api_url": "https://rseng.github.io/software/api/repos/github/cwentland0/perform"}, {"uid": "github/clauswilke/PeptideBuilder", "html_url": "https://rseng.github.io/software/repository/github/clauswilke/PeptideBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/clauswilke/PeptideBuilder"}, {"uid": "github/PabloVD/HAYASHI", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HAYASHI", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HAYASHI"}, {"uid": "github/PabloVD/CosmoGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/CosmoGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/CosmoGraphNet"}, {"uid": "github/PabloVD/21cmDeepLearning", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/21cmDeepLearning", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/21cmDeepLearning"}, {"uid": "github/PabloVD/HaloGraphNet", "html_url": "https://rseng.github.io/software/repository/github/PabloVD/HaloGraphNet", "api_url": "https://rseng.github.io/software/api/repos/github/PabloVD/HaloGraphNet"}, {"uid": "github/Substra/substra", "html_url": "https://rseng.github.io/software/repository/github/Substra/substra", "api_url": "https://rseng.github.io/software/api/repos/github/Substra/substra"}, {"uid": "github/nialov/fractopo", "html_url": "https://rseng.github.io/software/repository/github/nialov/fractopo", "api_url": "https://rseng.github.io/software/api/repos/github/nialov/fractopo"}, {"uid": "github/MIT-STARLab/deconfuser", "html_url": "https://rseng.github.io/software/repository/github/MIT-STARLab/deconfuser", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-STARLab/deconfuser"}, {"uid": "github/DTsuna/binary_precursor", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/binary_precursor", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/binary_precursor"}, {"uid": "github/DTsuna/CHIPS", "html_url": "https://rseng.github.io/software/repository/github/DTsuna/CHIPS", "api_url": "https://rseng.github.io/software/api/repos/github/DTsuna/CHIPS"}, {"uid": "github/sanger-pathogens/Roary", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Roary", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Roary"}, {"uid": "github/sanger-pathogens/ariba", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/ariba", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/ariba"}, {"uid": "github/sanger-pathogens/assembly-stats", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/assembly-stats", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/assembly-stats"}, {"uid": "github/sanger-pathogens/gubbins", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/gubbins", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/gubbins"}, {"uid": "github/sanger-pathogens/Fastaq", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Fastaq", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Fastaq"}, {"uid": "github/sanger-pathogens/Artemis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Artemis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Artemis"}, {"uid": "github/sanger-pathogens/snp-sites", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/snp-sites", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/snp-sites"}, {"uid": "github/sanger-pathogens/pymummer", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/pymummer", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/pymummer"}, {"uid": "github/sanger-pathogens/iva", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/iva", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/iva"}, {"uid": "github/sanger-pathogens/circlator", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/circlator", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/circlator"}, {"uid": "github/sanger-pathogens/Bio-Tradis", "html_url": "https://rseng.github.io/software/repository/github/sanger-pathogens/Bio-Tradis", "api_url": "https://rseng.github.io/software/api/repos/github/sanger-pathogens/Bio-Tradis"}, {"uid": "github/automl/amltk", "html_url": "https://rseng.github.io/software/repository/github/automl/amltk", "api_url": "https://rseng.github.io/software/api/repos/github/automl/amltk"}, {"uid": "github/prajwel/curvit", "html_url": "https://rseng.github.io/software/repository/github/prajwel/curvit", "api_url": "https://rseng.github.io/software/api/repos/github/prajwel/curvit"}, {"uid": "github/yyZhang14/dbEssLnc", "html_url": "https://rseng.github.io/software/repository/github/yyZhang14/dbEssLnc", "api_url": "https://rseng.github.io/software/api/repos/github/yyZhang14/dbEssLnc"}, {"uid": "github/virgesmith/neworder", "html_url": "https://rseng.github.io/software/repository/github/virgesmith/neworder", "api_url": "https://rseng.github.io/software/api/repos/github/virgesmith/neworder"}, {"uid": "github/cschreib/egg", "html_url": "https://rseng.github.io/software/repository/github/cschreib/egg", "api_url": "https://rseng.github.io/software/api/repos/github/cschreib/egg"}, {"uid": "github/SouthGreenPlatform/PyRice", "html_url": "https://rseng.github.io/software/repository/github/SouthGreenPlatform/PyRice", "api_url": "https://rseng.github.io/software/api/repos/github/SouthGreenPlatform/PyRice"}, {"uid": "github/tibordome/cosmic_profiles", "html_url": "https://rseng.github.io/software/repository/github/tibordome/cosmic_profiles", "api_url": "https://rseng.github.io/software/api/repos/github/tibordome/cosmic_profiles"}, {"uid": "github/nikhilroxtomar/FANet", "html_url": "https://rseng.github.io/software/repository/github/nikhilroxtomar/FANet", "api_url": "https://rseng.github.io/software/api/repos/github/nikhilroxtomar/FANet"}, {"uid": "github/adamantine-sim/adamantine", "html_url": "https://rseng.github.io/software/repository/github/adamantine-sim/adamantine", "api_url": "https://rseng.github.io/software/api/repos/github/adamantine-sim/adamantine"}, {"uid": "github/kadyb/rgugik", "html_url": "https://rseng.github.io/software/repository/github/kadyb/rgugik", "api_url": "https://rseng.github.io/software/api/repos/github/kadyb/rgugik"}, {"uid": "github/puregome/notebooks", "html_url": "https://rseng.github.io/software/repository/github/puregome/notebooks", "api_url": "https://rseng.github.io/software/api/repos/github/puregome/notebooks"}, {"uid": "github/thraraujo/pysymmpol", "html_url": "https://rseng.github.io/software/repository/github/thraraujo/pysymmpol", "api_url": "https://rseng.github.io/software/api/repos/github/thraraujo/pysymmpol"}, {"uid": "github/bencebeky/spotrod", "html_url": "https://rseng.github.io/software/repository/github/bencebeky/spotrod", "api_url": "https://rseng.github.io/software/api/repos/github/bencebeky/spotrod"}, {"uid": "github/kambrian/SubGen", "html_url": "https://rseng.github.io/software/repository/github/kambrian/SubGen", "api_url": "https://rseng.github.io/software/api/repos/github/kambrian/SubGen"}, {"uid": "github/joannegger/plaNETic", "html_url": "https://rseng.github.io/software/repository/github/joannegger/plaNETic", "api_url": "https://rseng.github.io/software/api/repos/github/joannegger/plaNETic"}, {"uid": "github/AgentM-GEG/residual_feature_extraction", "html_url": "https://rseng.github.io/software/repository/github/AgentM-GEG/residual_feature_extraction", "api_url": "https://rseng.github.io/software/api/repos/github/AgentM-GEG/residual_feature_extraction"}, {"uid": "github/renecotyfanboy/jaxspec", "html_url": "https://rseng.github.io/software/repository/github/renecotyfanboy/jaxspec", "api_url": "https://rseng.github.io/software/api/repos/github/renecotyfanboy/jaxspec"}, {"uid": "github/jeffzhen/omnical", "html_url": "https://rseng.github.io/software/repository/github/jeffzhen/omnical", "api_url": "https://rseng.github.io/software/api/repos/github/jeffzhen/omnical"}, {"uid": "github/wvanzeist/riroriro", "html_url": "https://rseng.github.io/software/repository/github/wvanzeist/riroriro", "api_url": "https://rseng.github.io/software/api/repos/github/wvanzeist/riroriro"}, {"uid": "github/TRASAL/AMBER", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/AMBER", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/AMBER"}, {"uid": "github/TRASAL/psrdada-python", "html_url": "https://rseng.github.io/software/repository/github/TRASAL/psrdada-python", "api_url": "https://rseng.github.io/software/api/repos/github/TRASAL/psrdada-python"}, {"uid": "github/andizq/sf3dmodels", "html_url": "https://rseng.github.io/software/repository/github/andizq/sf3dmodels", "api_url": "https://rseng.github.io/software/api/repos/github/andizq/sf3dmodels"}, {"uid": "github/abrupt-climate/hyper-canny", "html_url": "https://rseng.github.io/software/repository/github/abrupt-climate/hyper-canny", "api_url": "https://rseng.github.io/software/api/repos/github/abrupt-climate/hyper-canny"}, {"uid": "github/EOSC-LOFAR/lofar-ld", "html_url": "https://rseng.github.io/software/repository/github/EOSC-LOFAR/lofar-ld", "api_url": "https://rseng.github.io/software/api/repos/github/EOSC-LOFAR/lofar-ld"}, {"uid": "github/smillerc/CurvilinearGrids.jl", "html_url": "https://rseng.github.io/software/repository/github/smillerc/CurvilinearGrids.jl", "api_url": "https://rseng.github.io/software/api/repos/github/smillerc/CurvilinearGrids.jl"}, {"uid": "github/arnauqb/Qwind.jl", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/Qwind.jl", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/Qwind.jl"}, {"uid": "github/arnauqb/qwind", "html_url": "https://rseng.github.io/software/repository/github/arnauqb/qwind", "api_url": "https://rseng.github.io/software/api/repos/github/arnauqb/qwind"}, {"uid": "github/nci/scores", "html_url": "https://rseng.github.io/software/repository/github/nci/scores", "api_url": "https://rseng.github.io/software/api/repos/github/nci/scores"}, {"uid": "github/VChristiaens/special", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/special", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/special"}, {"uid": "github/VChristiaens/vcal_sphere", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/vcal_sphere", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/vcal_sphere"}, {"uid": "github/VChristiaens/MINDS", "html_url": "https://rseng.github.io/software/repository/github/VChristiaens/MINDS", "api_url": "https://rseng.github.io/software/api/repos/github/VChristiaens/MINDS"}, {"uid": "github/lightning-project/lightning", "html_url": "https://rseng.github.io/software/repository/github/lightning-project/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/lightning-project/lightning"}, {"uid": "github/jenniferlu717/Bracken", "html_url": "https://rseng.github.io/software/repository/github/jenniferlu717/Bracken", "api_url": "https://rseng.github.io/software/api/repos/github/jenniferlu717/Bracken"}, {"uid": "github/xinyiguan/py2lispIDyOM", "html_url": "https://rseng.github.io/software/repository/github/xinyiguan/py2lispIDyOM", "api_url": "https://rseng.github.io/software/api/repos/github/xinyiguan/py2lispIDyOM"}, {"uid": "github/blackjax-devs/blackjax", "html_url": "https://rseng.github.io/software/repository/github/blackjax-devs/blackjax", "api_url": "https://rseng.github.io/software/api/repos/github/blackjax-devs/blackjax"}, {"uid": "github/ankushaggarwal/pymecht", "html_url": "https://rseng.github.io/software/repository/github/ankushaggarwal/pymecht", "api_url": "https://rseng.github.io/software/api/repos/github/ankushaggarwal/pymecht"}, {"uid": "github/JakobRoche/OCSVM-Transit-Detection", "html_url": "https://rseng.github.io/software/repository/github/JakobRoche/OCSVM-Transit-Detection", "api_url": "https://rseng.github.io/software/api/repos/github/JakobRoche/OCSVM-Transit-Detection"}, {"uid": "github/CrowdTruth/CrowdTruth", "html_url": "https://rseng.github.io/software/repository/github/CrowdTruth/CrowdTruth", "api_url": "https://rseng.github.io/software/api/repos/github/CrowdTruth/CrowdTruth"}, {"uid": "github/jonaselgammal/SIGWAY", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/SIGWAY", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/SIGWAY"}, {"uid": "github/jonaselgammal/GPry", "html_url": "https://rseng.github.io/software/repository/github/jonaselgammal/GPry", "api_url": "https://rseng.github.io/software/api/repos/github/jonaselgammal/GPry"}, {"uid": "github/Via-Appia/via-appia-online-viewer", "html_url": "https://rseng.github.io/software/repository/github/Via-Appia/via-appia-online-viewer", "api_url": "https://rseng.github.io/software/api/repos/github/Via-Appia/via-appia-online-viewer"}, {"uid": "github/samirmartins/pydaq", "html_url": "https://rseng.github.io/software/repository/github/samirmartins/pydaq", "api_url": "https://rseng.github.io/software/api/repos/github/samirmartins/pydaq"}, {"uid": "github/TheJacksonLaboratory/drug-synergy", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/drug-synergy", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/drug-synergy"}, {"uid": "github/TheJacksonLaboratory/SvAnn", "html_url": "https://rseng.github.io/software/repository/github/TheJacksonLaboratory/SvAnn", "api_url": "https://rseng.github.io/software/api/repos/github/TheJacksonLaboratory/SvAnn"}, {"uid": "github/ColdThunder/NR-code", "html_url": "https://rseng.github.io/software/repository/github/ColdThunder/NR-code", "api_url": "https://rseng.github.io/software/api/repos/github/ColdThunder/NR-code"}, {"uid": "github/witseie/fpgaperm", "html_url": "https://rseng.github.io/software/repository/github/witseie/fpgaperm", "api_url": "https://rseng.github.io/software/api/repos/github/witseie/fpgaperm"}, {"uid": "github/uw-comphys/shapelets", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/shapelets", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/shapelets"}, {"uid": "github/uw-comphys/opencmp", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/opencmp", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/opencmp"}, {"uid": "github/uw-comphys/openccm", "html_url": "https://rseng.github.io/software/repository/github/uw-comphys/openccm", "api_url": "https://rseng.github.io/software/api/repos/github/uw-comphys/openccm"}, {"uid": "github/LucindaLilley/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/LucindaLilley/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/LucindaLilley/PIRATES"}, {"uid": "github/lammps/lammps", "html_url": "https://rseng.github.io/software/repository/github/lammps/lammps", "api_url": "https://rseng.github.io/software/api/repos/github/lammps/lammps"}, {"uid": "github/ZjuLiangsl/mmkp", "html_url": "https://rseng.github.io/software/repository/github/ZjuLiangsl/mmkp", "api_url": "https://rseng.github.io/software/api/repos/github/ZjuLiangsl/mmkp"}, {"uid": "github/DFKI-NI/syclops", "html_url": "https://rseng.github.io/software/repository/github/DFKI-NI/syclops", "api_url": "https://rseng.github.io/software/api/repos/github/DFKI-NI/syclops"}, {"uid": "github/jonathanHuwP/CrystalGrowthTracker", "html_url": "https://rseng.github.io/software/repository/github/jonathanHuwP/CrystalGrowthTracker", "api_url": "https://rseng.github.io/software/api/repos/github/jonathanHuwP/CrystalGrowthTracker"}, {"uid": "github/eisascience/HISTA", "html_url": "https://rseng.github.io/software/repository/github/eisascience/HISTA", "api_url": "https://rseng.github.io/software/api/repos/github/eisascience/HISTA"}, {"uid": "github/beastraban/INSANE", "html_url": "https://rseng.github.io/software/repository/github/beastraban/INSANE", "api_url": "https://rseng.github.io/software/api/repos/github/beastraban/INSANE"}, {"uid": "github/EMResearch/EvoMaster", "html_url": "https://rseng.github.io/software/repository/github/EMResearch/EvoMaster", "api_url": "https://rseng.github.io/software/api/repos/github/EMResearch/EvoMaster"}, {"uid": "github/navasmontilla/CAELUM", "html_url": "https://rseng.github.io/software/repository/github/navasmontilla/CAELUM", "api_url": "https://rseng.github.io/software/api/repos/github/navasmontilla/CAELUM"}, {"uid": "github/BioinformaticsPlatformWIV-ISP/PACU", "html_url": "https://rseng.github.io/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", "api_url": "https://rseng.github.io/software/api/repos/github/BioinformaticsPlatformWIV-ISP/PACU"}, {"uid": "github/TeamPerie/CellDestiny", "html_url": "https://rseng.github.io/software/repository/github/TeamPerie/CellDestiny", "api_url": "https://rseng.github.io/software/api/repos/github/TeamPerie/CellDestiny"}, {"uid": "github/artic-network/fieldbioinformatics", "html_url": "https://rseng.github.io/software/repository/github/artic-network/fieldbioinformatics", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/fieldbioinformatics"}, {"uid": "github/artic-network/readucks", "html_url": "https://rseng.github.io/software/repository/github/artic-network/readucks", "api_url": "https://rseng.github.io/software/api/repos/github/artic-network/readucks"}, {"uid": "github/CExA-project/ddc", "html_url": "https://rseng.github.io/software/repository/github/CExA-project/ddc", "api_url": "https://rseng.github.io/software/api/repos/github/CExA-project/ddc"}, {"uid": "github/mh-skjelvareid/synaptus", "html_url": "https://rseng.github.io/software/repository/github/mh-skjelvareid/synaptus", "api_url": "https://rseng.github.io/software/api/repos/github/mh-skjelvareid/synaptus"}, {"uid": "github/StevenGolovkine/FDApy", "html_url": "https://rseng.github.io/software/repository/github/StevenGolovkine/FDApy", "api_url": "https://rseng.github.io/software/api/repos/github/StevenGolovkine/FDApy"}, {"uid": "github/LauraHerold/pinc", "html_url": "https://rseng.github.io/software/repository/github/LauraHerold/pinc", "api_url": "https://rseng.github.io/software/api/repos/github/LauraHerold/pinc"}, {"uid": "github/TeraTrees/TIPP", "html_url": "https://rseng.github.io/software/repository/github/TeraTrees/TIPP", "api_url": "https://rseng.github.io/software/api/repos/github/TeraTrees/TIPP"}, {"uid": "github/achael/eht-imaging", "html_url": "https://rseng.github.io/software/repository/github/achael/eht-imaging", "api_url": "https://rseng.github.io/software/api/repos/github/achael/eht-imaging"}, {"uid": "github/CederGroupHub/smol", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/smol", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/smol"}, {"uid": "github/CederGroupHub/sparse-lm", "html_url": "https://rseng.github.io/software/repository/github/CederGroupHub/sparse-lm", "api_url": "https://rseng.github.io/software/api/repos/github/CederGroupHub/sparse-lm"}, {"uid": "github/evanhockings/QuantumACES.jl", "html_url": "https://rseng.github.io/software/repository/github/evanhockings/QuantumACES.jl", "api_url": "https://rseng.github.io/software/api/repos/github/evanhockings/QuantumACES.jl"}, {"uid": "github/XSLiuLab/Seq2Neo", "html_url": "https://rseng.github.io/software/repository/github/XSLiuLab/Seq2Neo", "api_url": "https://rseng.github.io/software/api/repos/github/XSLiuLab/Seq2Neo"}, {"uid": "github/gmbrandt/xwavecal", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/xwavecal", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/xwavecal"}, {"uid": "github/gmbrandt/HTOF", "html_url": "https://rseng.github.io/software/repository/github/gmbrandt/HTOF", "api_url": "https://rseng.github.io/software/api/repos/github/gmbrandt/HTOF"}, {"uid": "github/andersen-lab/ivar", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/ivar", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/ivar"}, {"uid": "github/andersen-lab/html", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/html", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/html"}, {"uid": "github/andersen-lab/Freyja", "html_url": "https://rseng.github.io/software/repository/github/andersen-lab/Freyja", "api_url": "https://rseng.github.io/software/api/repos/github/andersen-lab/Freyja"}, {"uid": "github/SPARTA-dev/SPARTA", "html_url": "https://rseng.github.io/software/repository/github/SPARTA-dev/SPARTA", "api_url": "https://rseng.github.io/software/api/repos/github/SPARTA-dev/SPARTA"}, {"uid": "github/Martindelosrios/ROGER", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/ROGER", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/ROGER"}, {"uid": "github/Martindelosrios/cosmic-kite", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/cosmic-kite", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/cosmic-kite"}, {"uid": "github/Martindelosrios/MeSsI", "html_url": "https://rseng.github.io/software/repository/github/Martindelosrios/MeSsI", "api_url": "https://rseng.github.io/software/api/repos/github/Martindelosrios/MeSsI"}, {"uid": "github/opengenomebrowser/opengenomebrowser", "html_url": "https://rseng.github.io/software/repository/github/opengenomebrowser/opengenomebrowser", "api_url": "https://rseng.github.io/software/api/repos/github/opengenomebrowser/opengenomebrowser"}, {"uid": "github/chrishales/pieflag", "html_url": "https://rseng.github.io/software/repository/github/chrishales/pieflag", "api_url": "https://rseng.github.io/software/api/repos/github/chrishales/pieflag"}, {"uid": "github/weber1158/eds-classification", "html_url": "https://rseng.github.io/software/repository/github/weber1158/eds-classification", "api_url": "https://rseng.github.io/software/api/repos/github/weber1158/eds-classification"}, {"uid": "github/dcjones/quip", "html_url": "https://rseng.github.io/software/repository/github/dcjones/quip", "api_url": "https://rseng.github.io/software/api/repos/github/dcjones/quip"}, {"uid": "github/vallima/PRyMordial", "html_url": "https://rseng.github.io/software/repository/github/vallima/PRyMordial", "api_url": "https://rseng.github.io/software/api/repos/github/vallima/PRyMordial"}, {"uid": "github/alekseyzimin/ufasta", "html_url": "https://rseng.github.io/software/repository/github/alekseyzimin/ufasta", "api_url": "https://rseng.github.io/software/api/repos/github/alekseyzimin/ufasta"}, {"uid": "github/jah1994/PyTorchDIA", "html_url": "https://rseng.github.io/software/repository/github/jah1994/PyTorchDIA", "api_url": "https://rseng.github.io/software/api/repos/github/jah1994/PyTorchDIA"}, {"uid": "github/mfruzan/HaploMaker", "html_url": "https://rseng.github.io/software/repository/github/mfruzan/HaploMaker", "api_url": "https://rseng.github.io/software/api/repos/github/mfruzan/HaploMaker"}, {"uid": "github/maserlib/ExPRES", "html_url": "https://rseng.github.io/software/repository/github/maserlib/ExPRES", "api_url": "https://rseng.github.io/software/api/repos/github/maserlib/ExPRES"}, {"uid": "github/zhongqiu1245/CCS-Net", "html_url": "https://rseng.github.io/software/repository/github/zhongqiu1245/CCS-Net", "api_url": "https://rseng.github.io/software/api/repos/github/zhongqiu1245/CCS-Net"}, {"uid": "github/xraypy/xraylarch", "html_url": "https://rseng.github.io/software/repository/github/xraypy/xraylarch", "api_url": "https://rseng.github.io/software/api/repos/github/xraypy/xraylarch"}, {"uid": "github/cieslar/Indri", "html_url": "https://rseng.github.io/software/repository/github/cieslar/Indri", "api_url": "https://rseng.github.io/software/api/repos/github/cieslar/Indri"}, {"uid": "github/cwinpy/cwinpy", "html_url": "https://rseng.github.io/software/repository/github/cwinpy/cwinpy", "api_url": "https://rseng.github.io/software/api/repos/github/cwinpy/cwinpy"}, {"uid": "github/agnesbrnb/MetIDfyR", "html_url": "https://rseng.github.io/software/repository/github/agnesbrnb/MetIDfyR", "api_url": "https://rseng.github.io/software/api/repos/github/agnesbrnb/MetIDfyR"}, {"uid": "github/bioAI-Oslo/Spikeometric", "html_url": "https://rseng.github.io/software/repository/github/bioAI-Oslo/Spikeometric", "api_url": "https://rseng.github.io/software/api/repos/github/bioAI-Oslo/Spikeometric"}, {"uid": "github/geoffryan/afterglowpy", "html_url": "https://rseng.github.io/software/repository/github/geoffryan/afterglowpy", "api_url": "https://rseng.github.io/software/api/repos/github/geoffryan/afterglowpy"}, {"uid": "github/ppsp-team/PyNM", "html_url": "https://rseng.github.io/software/repository/github/ppsp-team/PyNM", "api_url": "https://rseng.github.io/software/api/repos/github/ppsp-team/PyNM"}, {"uid": "github/castro-gzlz/TESS-cont", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/TESS-cont", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/TESS-cont"}, {"uid": "github/castro-gzlz/mr-plotter", "html_url": "https://rseng.github.io/software/repository/github/castro-gzlz/mr-plotter", "api_url": "https://rseng.github.io/software/api/repos/github/castro-gzlz/mr-plotter"}, {"uid": "github/jfowkes/pycutest", "html_url": "https://rseng.github.io/software/repository/github/jfowkes/pycutest", "api_url": "https://rseng.github.io/software/api/repos/github/jfowkes/pycutest"}, {"uid": "github/10XGenomics/bamtofastq", "html_url": "https://rseng.github.io/software/repository/github/10XGenomics/bamtofastq", "api_url": "https://rseng.github.io/software/api/repos/github/10XGenomics/bamtofastq"}, {"uid": "github/deepmedic/deepmedic", "html_url": "https://rseng.github.io/software/repository/github/deepmedic/deepmedic", "api_url": "https://rseng.github.io/software/api/repos/github/deepmedic/deepmedic"}, {"uid": "github/RTIInternational/gobbli", "html_url": "https://rseng.github.io/software/repository/github/RTIInternational/gobbli", "api_url": "https://rseng.github.io/software/api/repos/github/RTIInternational/gobbli"}, {"uid": "github/lucydot/effmass", "html_url": "https://rseng.github.io/software/repository/github/lucydot/effmass", "api_url": "https://rseng.github.io/software/api/repos/github/lucydot/effmass"}, {"uid": "github/nikhil-sarin/redback", "html_url": "https://rseng.github.io/software/repository/github/nikhil-sarin/redback", "api_url": "https://rseng.github.io/software/api/repos/github/nikhil-sarin/redback"}, {"uid": "github/babelomics/impuSARS", "html_url": "https://rseng.github.io/software/repository/github/babelomics/impuSARS", "api_url": "https://rseng.github.io/software/api/repos/github/babelomics/impuSARS"}, {"uid": "github/timkartar/RNAscape", "html_url": "https://rseng.github.io/software/repository/github/timkartar/RNAscape", "api_url": "https://rseng.github.io/software/api/repos/github/timkartar/RNAscape"}, {"uid": "github/Electrostatics/apbs", "html_url": "https://rseng.github.io/software/repository/github/Electrostatics/apbs", "api_url": "https://rseng.github.io/software/api/repos/github/Electrostatics/apbs"}, {"uid": "github/exciting/excitingtools", "html_url": "https://rseng.github.io/software/repository/github/exciting/excitingtools", "api_url": "https://rseng.github.io/software/api/repos/github/exciting/excitingtools"}, {"uid": "github/sbi-dev/sbi", "html_url": "https://rseng.github.io/software/repository/github/sbi-dev/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/sbi-dev/sbi"}, {"uid": "github/TrackerControl/tracker-control-android", "html_url": "https://rseng.github.io/software/repository/github/TrackerControl/tracker-control-android", "api_url": "https://rseng.github.io/software/api/repos/github/TrackerControl/tracker-control-android"}, {"uid": "github/PyPO-dev/PyPO", "html_url": "https://rseng.github.io/software/repository/github/PyPO-dev/PyPO", "api_url": "https://rseng.github.io/software/api/repos/github/PyPO-dev/PyPO"}, {"uid": "github/DMGW-Goethe/imripy", "html_url": "https://rseng.github.io/software/repository/github/DMGW-Goethe/imripy", "api_url": "https://rseng.github.io/software/api/repos/github/DMGW-Goethe/imripy"}, {"uid": "github/technic960183/spherimatch", "html_url": "https://rseng.github.io/software/repository/github/technic960183/spherimatch", "api_url": "https://rseng.github.io/software/api/repos/github/technic960183/spherimatch"}, {"uid": "github/Ruiz-HCI-Lab/ggMOB", "html_url": "https://rseng.github.io/software/repository/github/Ruiz-HCI-Lab/ggMOB", "api_url": "https://rseng.github.io/software/api/repos/github/Ruiz-HCI-Lab/ggMOB"}, {"uid": "github/hveerten/katu", "html_url": "https://rseng.github.io/software/repository/github/hveerten/katu", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/katu"}, {"uid": "github/hveerten/boxfit", "html_url": "https://rseng.github.io/software/repository/github/hveerten/boxfit", "api_url": "https://rseng.github.io/software/api/repos/github/hveerten/boxfit"}, {"uid": "github/dnafinder/uroccomp", "html_url": "https://rseng.github.io/software/repository/github/dnafinder/uroccomp", "api_url": "https://rseng.github.io/software/api/repos/github/dnafinder/uroccomp"}, {"uid": "github/aymgal/COOLEST", "html_url": "https://rseng.github.io/software/repository/github/aymgal/COOLEST", "api_url": "https://rseng.github.io/software/api/repos/github/aymgal/COOLEST"}, {"uid": "github/grdspcht/ggret", "html_url": "https://rseng.github.io/software/repository/github/grdspcht/ggret", "api_url": "https://rseng.github.io/software/api/repos/github/grdspcht/ggret"}, {"uid": "github/YangLab/CIRCexplorer2", "html_url": "https://rseng.github.io/software/repository/github/YangLab/CIRCexplorer2", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/CIRCexplorer2"}, {"uid": "github/YangLab/RNAlight", "html_url": "https://rseng.github.io/software/repository/github/YangLab/RNAlight", "api_url": "https://rseng.github.io/software/api/repos/github/YangLab/RNAlight"}, {"uid": "github/jkbonfield/io_lib", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/io_lib", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/io_lib"}, {"uid": "github/jkbonfield/htscodecs", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/htscodecs", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/htscodecs"}, {"uid": "github/jkbonfield/crumble", "html_url": "https://rseng.github.io/software/repository/github/jkbonfield/crumble", "api_url": "https://rseng.github.io/software/api/repos/github/jkbonfield/crumble"}, {"uid": "github/bids-standard/bids-validator", "html_url": "https://rseng.github.io/software/repository/github/bids-standard/bids-validator", "api_url": "https://rseng.github.io/software/api/repos/github/bids-standard/bids-validator"}, {"uid": "github/lemene/PECAT", "html_url": "https://rseng.github.io/software/repository/github/lemene/PECAT", "api_url": "https://rseng.github.io/software/api/repos/github/lemene/PECAT"}, {"uid": "github/mgcooper/baseflow", "html_url": "https://rseng.github.io/software/repository/github/mgcooper/baseflow", "api_url": "https://rseng.github.io/software/api/repos/github/mgcooper/baseflow"}, {"uid": "github/hematthi/SysSimPyPlots", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyPlots", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyPlots"}, {"uid": "github/hematthi/SysSimPyMMEN", "html_url": "https://rseng.github.io/software/repository/github/hematthi/SysSimPyMMEN", "api_url": "https://rseng.github.io/software/api/repos/github/hematthi/SysSimPyMMEN"}, {"uid": "github/itpplasma/GORILLA", "html_url": "https://rseng.github.io/software/repository/github/itpplasma/GORILLA", "api_url": "https://rseng.github.io/software/api/repos/github/itpplasma/GORILLA"}, {"uid": "github/CatarinaMMarques/FisherCosmology", "html_url": "https://rseng.github.io/software/repository/github/CatarinaMMarques/FisherCosmology", "api_url": "https://rseng.github.io/software/api/repos/github/CatarinaMMarques/FisherCosmology"}, {"uid": "github/JosephIsaacTurner/pypaperretriever", "html_url": "https://rseng.github.io/software/repository/github/JosephIsaacTurner/pypaperretriever", "api_url": "https://rseng.github.io/software/api/repos/github/JosephIsaacTurner/pypaperretriever"}, {"uid": "github/tum-pbs/PhiML", "html_url": "https://rseng.github.io/software/repository/github/tum-pbs/PhiML", "api_url": "https://rseng.github.io/software/api/repos/github/tum-pbs/PhiML"}, {"uid": "github/CMC-lab/TranCIT", "html_url": "https://rseng.github.io/software/repository/github/CMC-lab/TranCIT", "api_url": "https://rseng.github.io/software/api/repos/github/CMC-lab/TranCIT"}, {"uid": "github/cbroeckl/RAMClustR", "html_url": "https://rseng.github.io/software/repository/github/cbroeckl/RAMClustR", "api_url": "https://rseng.github.io/software/api/repos/github/cbroeckl/RAMClustR"}, {"uid": "github/ezquiaga/phazap", "html_url": "https://rseng.github.io/software/repository/github/ezquiaga/phazap", "api_url": "https://rseng.github.io/software/api/repos/github/ezquiaga/phazap"}, {"uid": "github/OwenWard/ppdiag", "html_url": "https://rseng.github.io/software/repository/github/OwenWard/ppdiag", "api_url": "https://rseng.github.io/software/api/repos/github/OwenWard/ppdiag"}, {"uid": "github/debbiemarkslab/plmc", "html_url": "https://rseng.github.io/software/repository/github/debbiemarkslab/plmc", "api_url": "https://rseng.github.io/software/api/repos/github/debbiemarkslab/plmc"}, {"uid": "github/lucian-ilie/DELPHI", "html_url": "https://rseng.github.io/software/repository/github/lucian-ilie/DELPHI", "api_url": "https://rseng.github.io/software/api/repos/github/lucian-ilie/DELPHI"}, {"uid": "github/cytham/nanovar", "html_url": "https://rseng.github.io/software/repository/github/cytham/nanovar", "api_url": "https://rseng.github.io/software/api/repos/github/cytham/nanovar"}, {"uid": "github/nawrockie/vadr", "html_url": "https://rseng.github.io/software/repository/github/nawrockie/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/nawrockie/vadr"}, {"uid": "github/haimengzhao/magic-microlensing", "html_url": "https://rseng.github.io/software/repository/github/haimengzhao/magic-microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/haimengzhao/magic-microlensing"}, {"uid": "github/aomlomics/tourmaline", "html_url": "https://rseng.github.io/software/repository/github/aomlomics/tourmaline", "api_url": "https://rseng.github.io/software/api/repos/github/aomlomics/tourmaline"}, {"uid": "github/DerrickWood/kraken2", "html_url": "https://rseng.github.io/software/repository/github/DerrickWood/kraken2", "api_url": "https://rseng.github.io/software/api/repos/github/DerrickWood/kraken2"}, {"uid": "github/geoelements/gns", "html_url": "https://rseng.github.io/software/repository/github/geoelements/gns", "api_url": "https://rseng.github.io/software/api/repos/github/geoelements/gns"}, {"uid": "github/RichardPIII/Cumulative-Time-Dilation", "html_url": "https://rseng.github.io/software/repository/github/RichardPIII/Cumulative-Time-Dilation", "api_url": "https://rseng.github.io/software/api/repos/github/RichardPIII/Cumulative-Time-Dilation"}, {"uid": "github/rohinkumar/correlcalc", "html_url": "https://rseng.github.io/software/repository/github/rohinkumar/correlcalc", "api_url": "https://rseng.github.io/software/api/repos/github/rohinkumar/correlcalc"}, {"uid": "github/vsquicciarini/madys", "html_url": "https://rseng.github.io/software/repository/github/vsquicciarini/madys", "api_url": "https://rseng.github.io/software/api/repos/github/vsquicciarini/madys"}, {"uid": "github/VeinsOfTheEarth/rabpro", "html_url": "https://rseng.github.io/software/repository/github/VeinsOfTheEarth/rabpro", "api_url": "https://rseng.github.io/software/api/repos/github/VeinsOfTheEarth/rabpro"}, {"uid": "github/luizfelippesr/galmag", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/galmag", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/galmag"}, {"uid": "github/luizfelippesr/magnetizer", "html_url": "https://rseng.github.io/software/repository/github/luizfelippesr/magnetizer", "api_url": "https://rseng.github.io/software/api/repos/github/luizfelippesr/magnetizer"}, {"uid": "github/stillwater-sc/universal", "html_url": "https://rseng.github.io/software/repository/github/stillwater-sc/universal", "api_url": "https://rseng.github.io/software/api/repos/github/stillwater-sc/universal"}, {"uid": "github/adriancorrendo/metrica", "html_url": "https://rseng.github.io/software/repository/github/adriancorrendo/metrica", "api_url": "https://rseng.github.io/software/api/repos/github/adriancorrendo/metrica"}, {"uid": "github/Mihart-web/CARBONETTE", "html_url": "https://rseng.github.io/software/repository/github/Mihart-web/CARBONETTE", "api_url": "https://rseng.github.io/software/api/repos/github/Mihart-web/CARBONETTE"}, {"uid": "github/gasparl/possa", "html_url": "https://rseng.github.io/software/repository/github/gasparl/possa", "api_url": "https://rseng.github.io/software/api/repos/github/gasparl/possa"}, {"uid": "github/dglaeser/gridformat", "html_url": "https://rseng.github.io/software/repository/github/dglaeser/gridformat", "api_url": "https://rseng.github.io/software/api/repos/github/dglaeser/gridformat"}, {"uid": "github/variomes/sibtm-variomes", "html_url": "https://rseng.github.io/software/repository/github/variomes/sibtm-variomes", "api_url": "https://rseng.github.io/software/api/repos/github/variomes/sibtm-variomes"}, {"uid": "github/iquasere/UPIMAPI", "html_url": "https://rseng.github.io/software/repository/github/iquasere/UPIMAPI", "api_url": "https://rseng.github.io/software/api/repos/github/iquasere/UPIMAPI"}, {"uid": "github/mtceballos/SIRENAdoc", "html_url": "https://rseng.github.io/software/repository/github/mtceballos/SIRENAdoc", "api_url": "https://rseng.github.io/software/api/repos/github/mtceballos/SIRENAdoc"}, {"uid": "github/VirtualPhotonics/MieSimulatorGUI", "html_url": "https://rseng.github.io/software/repository/github/VirtualPhotonics/MieSimulatorGUI", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPhotonics/MieSimulatorGUI"}, {"uid": "github/BPSB/combine-p-values-discrete", "html_url": "https://rseng.github.io/software/repository/github/BPSB/combine-p-values-discrete", "api_url": "https://rseng.github.io/software/api/repos/github/BPSB/combine-p-values-discrete"}, {"uid": "github/bsumlin/PyMieScatt", "html_url": "https://rseng.github.io/software/repository/github/bsumlin/PyMieScatt", "api_url": "https://rseng.github.io/software/api/repos/github/bsumlin/PyMieScatt"}, {"uid": "github/lukapecnik/NiaAML", "html_url": "https://rseng.github.io/software/repository/github/lukapecnik/NiaAML", "api_url": "https://rseng.github.io/software/api/repos/github/lukapecnik/NiaAML"}, {"uid": "github/TinkerTools/tinker9", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/tinker9", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/tinker9"}, {"uid": "github/TinkerTools/Tinker-HP", "html_url": "https://rseng.github.io/software/repository/github/TinkerTools/Tinker-HP", "api_url": "https://rseng.github.io/software/api/repos/github/TinkerTools/Tinker-HP"}, {"uid": "github/LidkeLab/matlab-instrument-control", "html_url": "https://rseng.github.io/software/repository/github/LidkeLab/matlab-instrument-control", "api_url": "https://rseng.github.io/software/api/repos/github/LidkeLab/matlab-instrument-control"}, {"uid": "github/jradavenport/TheHammer", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/TheHammer", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/TheHammer"}, {"uid": "github/jradavenport/appaloosa", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/appaloosa", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/appaloosa"}, {"uid": "github/jradavenport/FBEYE", "html_url": "https://rseng.github.io/software/repository/github/jradavenport/FBEYE", "api_url": "https://rseng.github.io/software/api/repos/github/jradavenport/FBEYE"}, {"uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", "html_url": "https://rseng.github.io/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", "api_url": "https://rseng.github.io/software/api/repos/github/sunnyvagnozzi/Braneworld-extra-dimensions"}, {"uid": "github/mikolmogorov/Flye", "html_url": "https://rseng.github.io/software/repository/github/mikolmogorov/Flye", "api_url": "https://rseng.github.io/software/api/repos/github/mikolmogorov/Flye"}, {"uid": "github/areenberg/MDPSolver", "html_url": "https://rseng.github.io/software/repository/github/areenberg/MDPSolver", "api_url": "https://rseng.github.io/software/api/repos/github/areenberg/MDPSolver"}, {"uid": "github/TNEL-UCSD/autolfads-deploy", "html_url": "https://rseng.github.io/software/repository/github/TNEL-UCSD/autolfads-deploy", "api_url": "https://rseng.github.io/software/api/repos/github/TNEL-UCSD/autolfads-deploy"}, {"uid": "github/teuben/QAC", "html_url": "https://rseng.github.io/software/repository/github/teuben/QAC", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/QAC"}, {"uid": "github/teuben/DataComb", "html_url": "https://rseng.github.io/software/repository/github/teuben/DataComb", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/DataComb"}, {"uid": "github/teuben/nemo", "html_url": "https://rseng.github.io/software/repository/github/teuben/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/teuben/nemo"}, {"uid": "github/ahcm/ffindex", "html_url": "https://rseng.github.io/software/repository/github/ahcm/ffindex", "api_url": "https://rseng.github.io/software/api/repos/github/ahcm/ffindex"}, {"uid": "github/apcamargo/prodigal-gv", "html_url": "https://rseng.github.io/software/repository/github/apcamargo/prodigal-gv", "api_url": "https://rseng.github.io/software/api/repos/github/apcamargo/prodigal-gv"}, {"uid": "github/pyomeca/biosiglive", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biosiglive", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biosiglive"}, {"uid": "github/pyomeca/ezc3d", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/ezc3d", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/ezc3d"}, {"uid": "github/pyomeca/biorbd", "html_url": "https://rseng.github.io/software/repository/github/pyomeca/biorbd", "api_url": "https://rseng.github.io/software/api/repos/github/pyomeca/biorbd"}, {"uid": "github/PolymerGuy/recolo", "html_url": "https://rseng.github.io/software/repository/github/PolymerGuy/recolo", "api_url": "https://rseng.github.io/software/api/repos/github/PolymerGuy/recolo"}, {"uid": "github/pandegroup/openmm", "html_url": "https://rseng.github.io/software/repository/github/pandegroup/openmm", "api_url": "https://rseng.github.io/software/api/repos/github/pandegroup/openmm"}, {"uid": "github/amanchokshi/EMBERS", "html_url": "https://rseng.github.io/software/repository/github/amanchokshi/EMBERS", "api_url": "https://rseng.github.io/software/api/repos/github/amanchokshi/EMBERS"}, {"uid": "github/free1234hm/CLAM", "html_url": "https://rseng.github.io/software/repository/github/free1234hm/CLAM", "api_url": "https://rseng.github.io/software/api/repos/github/free1234hm/CLAM"}, {"uid": "github/JensUweUlrich/ReadBouncer", "html_url": "https://rseng.github.io/software/repository/github/JensUweUlrich/ReadBouncer", "api_url": "https://rseng.github.io/software/api/repos/github/JensUweUlrich/ReadBouncer"}, {"uid": "github/dftd3/simple-dftd3", "html_url": "https://rseng.github.io/software/repository/github/dftd3/simple-dftd3", "api_url": "https://rseng.github.io/software/api/repos/github/dftd3/simple-dftd3"}, {"uid": "github/ExeClim/Isca", "html_url": "https://rseng.github.io/software/repository/github/ExeClim/Isca", "api_url": "https://rseng.github.io/software/api/repos/github/ExeClim/Isca"}, {"uid": "github/ebmonson/2DFFTUtils-Module", "html_url": "https://rseng.github.io/software/repository/github/ebmonson/2DFFTUtils-Module", "api_url": "https://rseng.github.io/software/api/repos/github/ebmonson/2DFFTUtils-Module"}, {"uid": "github/GeneDx/scramble", "html_url": "https://rseng.github.io/software/repository/github/GeneDx/scramble", "api_url": "https://rseng.github.io/software/api/repos/github/GeneDx/scramble"}, {"uid": "github/KskAdch/TopologicalNumbers.jl", "html_url": "https://rseng.github.io/software/repository/github/KskAdch/TopologicalNumbers.jl", "api_url": "https://rseng.github.io/software/api/repos/github/KskAdch/TopologicalNumbers.jl"}, {"uid": "github/einsteinpy/einsteinpy", "html_url": "https://rseng.github.io/software/repository/github/einsteinpy/einsteinpy", "api_url": "https://rseng.github.io/software/api/repos/github/einsteinpy/einsteinpy"}, {"uid": "github/YinanZhao21/SOAP_GPU", "html_url": "https://rseng.github.io/software/repository/github/YinanZhao21/SOAP_GPU", "api_url": "https://rseng.github.io/software/api/repos/github/YinanZhao21/SOAP_GPU"}, {"uid": "github/opengeos/geoai", "html_url": "https://rseng.github.io/software/repository/github/opengeos/geoai", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/geoai"}, {"uid": "github/opengeos/segment-geospatial", "html_url": "https://rseng.github.io/software/repository/github/opengeos/segment-geospatial", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/segment-geospatial"}, {"uid": "github/opengeos/HyperCoast", "html_url": "https://rseng.github.io/software/repository/github/opengeos/HyperCoast", "api_url": "https://rseng.github.io/software/api/repos/github/opengeos/HyperCoast"}, {"uid": "github/liulab-dfci/TRUST4", "html_url": "https://rseng.github.io/software/repository/github/liulab-dfci/TRUST4", "api_url": "https://rseng.github.io/software/api/repos/github/liulab-dfci/TRUST4"}, {"uid": "github/Jonathanfreundlich/CuspCore", "html_url": "https://rseng.github.io/software/repository/github/Jonathanfreundlich/CuspCore", "api_url": "https://rseng.github.io/software/api/repos/github/Jonathanfreundlich/CuspCore"}, {"uid": "github/PaulSt/NGSTrefftz", "html_url": "https://rseng.github.io/software/repository/github/PaulSt/NGSTrefftz", "api_url": "https://rseng.github.io/software/api/repos/github/PaulSt/NGSTrefftz"}, {"uid": "github/mdruett/COCOPLOT", "html_url": "https://rseng.github.io/software/repository/github/mdruett/COCOPLOT", "api_url": "https://rseng.github.io/software/api/repos/github/mdruett/COCOPLOT"}, {"uid": "github/theia-dev/Qiber3D", "html_url": "https://rseng.github.io/software/repository/github/theia-dev/Qiber3D", "api_url": "https://rseng.github.io/software/api/repos/github/theia-dev/Qiber3D"}, {"uid": "github/LondonBiofoundry/basicsynbio", "html_url": "https://rseng.github.io/software/repository/github/LondonBiofoundry/basicsynbio", "api_url": "https://rseng.github.io/software/api/repos/github/LondonBiofoundry/basicsynbio"}, {"uid": "github/bcerutti/Zeltron-code", "html_url": "https://rseng.github.io/software/repository/github/bcerutti/Zeltron-code", "api_url": "https://rseng.github.io/software/api/repos/github/bcerutti/Zeltron-code"}, {"uid": "github/pierfied/karmma", "html_url": "https://rseng.github.io/software/repository/github/pierfied/karmma", "api_url": "https://rseng.github.io/software/api/repos/github/pierfied/karmma"}, {"uid": "github/iobio-zjut/IPTDFold", "html_url": "https://rseng.github.io/software/repository/github/iobio-zjut/IPTDFold", "api_url": "https://rseng.github.io/software/api/repos/github/iobio-zjut/IPTDFold"}, {"uid": "github/andrewmoore73/SourceDetect", "html_url": "https://rseng.github.io/software/repository/github/andrewmoore73/SourceDetect", "api_url": "https://rseng.github.io/software/api/repos/github/andrewmoore73/SourceDetect"}, {"uid": "github/ChenfuShi/HiChIP_peaks", "html_url": "https://rseng.github.io/software/repository/github/ChenfuShi/HiChIP_peaks", "api_url": "https://rseng.github.io/software/api/repos/github/ChenfuShi/HiChIP_peaks"}, {"uid": "github/tongzhouxu/mashpit", "html_url": "https://rseng.github.io/software/repository/github/tongzhouxu/mashpit", "api_url": "https://rseng.github.io/software/api/repos/github/tongzhouxu/mashpit"}, {"uid": "github/aabdurrouf/piXedfit", "html_url": "https://rseng.github.io/software/repository/github/aabdurrouf/piXedfit", "api_url": "https://rseng.github.io/software/api/repos/github/aabdurrouf/piXedfit"}, {"uid": "github/tao-bioinfo/MiFish", "html_url": "https://rseng.github.io/software/repository/github/tao-bioinfo/MiFish", "api_url": "https://rseng.github.io/software/api/repos/github/tao-bioinfo/MiFish"}, {"uid": "github/wasserman-group/pyCADMium", "html_url": "https://rseng.github.io/software/repository/github/wasserman-group/pyCADMium", "api_url": "https://rseng.github.io/software/api/repos/github/wasserman-group/pyCADMium"}, {"uid": "github/cheng-zhao/FCFC", "html_url": "https://rseng.github.io/software/repository/github/cheng-zhao/FCFC", "api_url": "https://rseng.github.io/software/api/repos/github/cheng-zhao/FCFC"}, {"uid": "github/CajoterBraak/demc2", "html_url": "https://rseng.github.io/software/repository/github/CajoterBraak/demc2", "api_url": "https://rseng.github.io/software/api/repos/github/CajoterBraak/demc2"}, {"uid": "github/saltastro/pyhrs", "html_url": "https://rseng.github.io/software/repository/github/saltastro/pyhrs", "api_url": "https://rseng.github.io/software/api/repos/github/saltastro/pyhrs"}, {"uid": "github/DICP1810/ComMap", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/ComMap", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/ComMap"}, {"uid": "github/DICP1810/SpotLink", "html_url": "https://rseng.github.io/software/repository/github/DICP1810/SpotLink", "api_url": "https://rseng.github.io/software/api/repos/github/DICP1810/SpotLink"}, {"uid": "github/valboz/VBMicroLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBMicroLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBMicroLensing"}, {"uid": "github/valboz/VBBinaryLensing", "html_url": "https://rseng.github.io/software/repository/github/valboz/VBBinaryLensing", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/VBBinaryLensing"}, {"uid": "github/valboz/RTModel", "html_url": "https://rseng.github.io/software/repository/github/valboz/RTModel", "api_url": "https://rseng.github.io/software/api/repos/github/valboz/RTModel"}, {"uid": "github/BackmanLab/PWSpy", "html_url": "https://rseng.github.io/software/repository/github/BackmanLab/PWSpy", "api_url": "https://rseng.github.io/software/api/repos/github/BackmanLab/PWSpy"}, {"uid": "github/rgmyr/corebreakout", "html_url": "https://rseng.github.io/software/repository/github/rgmyr/corebreakout", "api_url": "https://rseng.github.io/software/api/repos/github/rgmyr/corebreakout"}, {"uid": "github/gnuradio/gnuradio", "html_url": "https://rseng.github.io/software/repository/github/gnuradio/gnuradio", "api_url": "https://rseng.github.io/software/api/repos/github/gnuradio/gnuradio"}, {"uid": "github/YongyiLuo98/BVSim", "html_url": "https://rseng.github.io/software/repository/github/YongyiLuo98/BVSim", "api_url": "https://rseng.github.io/software/api/repos/github/YongyiLuo98/BVSim"}, {"uid": "github/Kkritos/Rapster", "html_url": "https://rseng.github.io/software/repository/github/Kkritos/Rapster", "api_url": "https://rseng.github.io/software/api/repos/github/Kkritos/Rapster"}, {"uid": "github/spyder-ide/spyder", "html_url": "https://rseng.github.io/software/repository/github/spyder-ide/spyder", "api_url": "https://rseng.github.io/software/api/repos/github/spyder-ide/spyder"}, {"uid": "github/FrdCHK/serial-MultiView", "html_url": "https://rseng.github.io/software/repository/github/FrdCHK/serial-MultiView", "api_url": "https://rseng.github.io/software/api/repos/github/FrdCHK/serial-MultiView"}, {"uid": "github/duetosymmetry/qnm", "html_url": "https://rseng.github.io/software/repository/github/duetosymmetry/qnm", "api_url": "https://rseng.github.io/software/api/repos/github/duetosymmetry/qnm"}, {"uid": "github/SoSongzhi/PVGA", "html_url": "https://rseng.github.io/software/repository/github/SoSongzhi/PVGA", "api_url": "https://rseng.github.io/software/api/repos/github/SoSongzhi/PVGA"}, {"uid": "github/ParaFly/ParaFly", "html_url": "https://rseng.github.io/software/repository/github/ParaFly/ParaFly", "api_url": "https://rseng.github.io/software/api/repos/github/ParaFly/ParaFly"}, {"uid": "github/multiply-org/sar-pre-processing", "html_url": "https://rseng.github.io/software/repository/github/multiply-org/sar-pre-processing", "api_url": "https://rseng.github.io/software/api/repos/github/multiply-org/sar-pre-processing"}, {"uid": "github/patkel/big-macs-calibrate", "html_url": "https://rseng.github.io/software/repository/github/patkel/big-macs-calibrate", "api_url": "https://rseng.github.io/software/api/repos/github/patkel/big-macs-calibrate"}, {"uid": "github/amerand/PMOIRED", "html_url": "https://rseng.github.io/software/repository/github/amerand/PMOIRED", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/PMOIRED"}, {"uid": "github/amerand/SPIPS", "html_url": "https://rseng.github.io/software/repository/github/amerand/SPIPS", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/SPIPS"}, {"uid": "github/amerand/CANDID", "html_url": "https://rseng.github.io/software/repository/github/amerand/CANDID", "api_url": "https://rseng.github.io/software/api/repos/github/amerand/CANDID"}, {"uid": "github/johannes-titz/cofad", "html_url": "https://rseng.github.io/software/repository/github/johannes-titz/cofad", "api_url": "https://rseng.github.io/software/api/repos/github/johannes-titz/cofad"}, {"uid": "github/seamusclarke/rjplots", "html_url": "https://rseng.github.io/software/repository/github/seamusclarke/rjplots", "api_url": "https://rseng.github.io/software/api/repos/github/seamusclarke/rjplots"}, {"uid": "github/LucyMcGowan/tipr", "html_url": "https://rseng.github.io/software/repository/github/LucyMcGowan/tipr", "api_url": "https://rseng.github.io/software/api/repos/github/LucyMcGowan/tipr"}, {"uid": "github/plumed/plumed2", "html_url": "https://rseng.github.io/software/repository/github/plumed/plumed2", "api_url": "https://rseng.github.io/software/api/repos/github/plumed/plumed2"}, {"uid": "github/fstrozzi/Fastool", "html_url": "https://rseng.github.io/software/repository/github/fstrozzi/Fastool", "api_url": "https://rseng.github.io/software/api/repos/github/fstrozzi/Fastool"}, {"uid": "github/jeffcsauer/arcos_arcospy_information", "html_url": "https://rseng.github.io/software/repository/github/jeffcsauer/arcos_arcospy_information", "api_url": "https://rseng.github.io/software/api/repos/github/jeffcsauer/arcos_arcospy_information"}, {"uid": "github/barentsen/k2flix", "html_url": "https://rseng.github.io/software/repository/github/barentsen/k2flix", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/k2flix"}, {"uid": "github/barentsen/dave", "html_url": "https://rseng.github.io/software/repository/github/barentsen/dave", "api_url": "https://rseng.github.io/software/api/repos/github/barentsen/dave"}, {"uid": "github/xfangcosmo/FFTLog-and-beyond", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/FFTLog-and-beyond", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/FFTLog-and-beyond"}, {"uid": "github/xfangcosmo/2DFFTLog", "html_url": "https://rseng.github.io/software/repository/github/xfangcosmo/2DFFTLog", "api_url": "https://rseng.github.io/software/api/repos/github/xfangcosmo/2DFFTLog"}, {"uid": "github/FitSNAP/FitSNAP", "html_url": "https://rseng.github.io/software/repository/github/FitSNAP/FitSNAP", "api_url": "https://rseng.github.io/software/api/repos/github/FitSNAP/FitSNAP"}, {"uid": "github/deepmodeling/DMFF", "html_url": "https://rseng.github.io/software/repository/github/deepmodeling/DMFF", "api_url": "https://rseng.github.io/software/api/repos/github/deepmodeling/DMFF"}, {"uid": "github/bonsai-team/Porechop_ABI", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/Porechop_ABI", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/Porechop_ABI"}, {"uid": "github/bonsai-team/matam", "html_url": "https://rseng.github.io/software/repository/github/bonsai-team/matam", "api_url": "https://rseng.github.io/software/api/repos/github/bonsai-team/matam"}, {"uid": "github/meinardmueller/synctoolbox", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/synctoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/synctoolbox"}, {"uid": "github/meinardmueller/libfmp", "html_url": "https://rseng.github.io/software/repository/github/meinardmueller/libfmp", "api_url": "https://rseng.github.io/software/api/repos/github/meinardmueller/libfmp"}, {"uid": "github/NLeSC/structure-from-motion", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/structure-from-motion", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/structure-from-motion"}, {"uid": "github/NLeSC/xenon-flow", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-flow", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-flow"}, {"uid": "github/NLeSC/root-conda-recipes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/root-conda-recipes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/root-conda-recipes"}, {"uid": "github/NLeSC/SalientDetector-python", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-python", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-python"}, {"uid": "github/NLeSC/eEcology-SMS-reciever", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-SMS-reciever", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-SMS-reciever"}, {"uid": "github/NLeSC/nlesc-serverless-boilerplate", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/nlesc-serverless-boilerplate", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/nlesc-serverless-boilerplate"}, {"uid": "github/NLeSC/noodles", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/noodles", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/noodles"}, {"uid": "github/NLeSC/eAstroViz", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eAstroViz", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eAstroViz"}, {"uid": "github/NLeSC/spot", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/spot", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/spot"}, {"uid": "github/NLeSC/ahn-pointcloud-viewer-ws", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ahn-pointcloud-viewer-ws"}, {"uid": "github/NLeSC/docker-couch-admin", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/docker-couch-admin", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/docker-couch-admin"}, {"uid": "github/NLeSC/xtas", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xtas", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xtas"}, {"uid": "github/NLeSC/compressing-the-sky", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/compressing-the-sky", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/compressing-the-sky"}, {"uid": "github/NLeSC/boatswain", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/boatswain", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/boatswain"}, {"uid": "github/NLeSC/PattyData", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyData", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyData"}, {"uid": "github/NLeSC/pycoeman", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pycoeman", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pycoeman"}, {"uid": "github/NLeSC/litstudy", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/litstudy", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/litstudy"}, {"uid": "github/NLeSC/ShiCo", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ShiCo", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ShiCo"}, {"uid": "github/NLeSC/mcfly", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/mcfly", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/mcfly"}, {"uid": "github/NLeSC/UncertaintyVisualization", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/UncertaintyVisualization", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/UncertaintyVisualization"}, {"uid": "github/NLeSC/eEcology-Annotation-WS", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Annotation-WS", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Annotation-WS"}, {"uid": "github/NLeSC/DiVE", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/DiVE", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/DiVE"}, {"uid": "github/NLeSC/pattyvis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/pattyvis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/pattyvis"}, {"uid": "github/NLeSC/PattyAnalytics", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/PattyAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/PattyAnalytics"}, {"uid": "github/NLeSC/esibayes", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/esibayes", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/esibayes"}, {"uid": "github/NLeSC/cptm", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/cptm", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/cptm"}, {"uid": "github/NLeSC/Chemical-Analytics-Platform", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Chemical-Analytics-Platform", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Chemical-Analytics-Platform"}, {"uid": "github/NLeSC/xenon-grpc", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-grpc"}, {"uid": "github/NLeSC/python-pcl", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-pcl", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-pcl"}, {"uid": "github/NLeSC/baklava", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/baklava", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/baklava"}, {"uid": "github/NLeSC/eEcology-script-wrapper", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-script-wrapper", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-script-wrapper"}, {"uid": "github/NLeSC/fairdatapoint", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/fairdatapoint", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/fairdatapoint"}, {"uid": "github/NLeSC/SalientDescriptor-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDescriptor-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDescriptor-matlab"}, {"uid": "github/NLeSC/eSalsa-MPI", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eSalsa-MPI", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eSalsa-MPI"}, {"uid": "github/NLeSC/case-law-app", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/case-law-app", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/case-law-app"}, {"uid": "github/NLeSC/eEcology-Classification", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/eEcology-Classification", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/eEcology-Classification"}, {"uid": "github/NLeSC/MAGMa", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/MAGMa", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/MAGMa"}, {"uid": "github/NLeSC/xenon-cli", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/xenon-cli", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/xenon-cli"}, {"uid": "github/NLeSC/lokum", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/lokum", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/lokum"}, {"uid": "github/NLeSC/Massive-PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/Massive-PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/Massive-PotreeConverter"}, {"uid": "github/NLeSC/hadrianus-scripts", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/hadrianus-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/hadrianus-scripts"}, {"uid": "github/NLeSC/EEG-epilepsy-diagnosis", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/EEG-epilepsy-diagnosis"}, {"uid": "github/NLeSC/ExtJS-DateTime", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/ExtJS-DateTime", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/ExtJS-DateTime"}, {"uid": "github/NLeSC/OCTSegmentation", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/OCTSegmentation", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/OCTSegmentation"}, {"uid": "github/NLeSC/SalientDetector-matlab", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/SalientDetector-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/SalientDetector-matlab"}, {"uid": "github/NLeSC/python-template", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/python-template", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/python-template"}, {"uid": "github/NLeSC/osmium", "html_url": "https://rseng.github.io/software/repository/github/NLeSC/osmium", "api_url": "https://rseng.github.io/software/api/repos/github/NLeSC/osmium"}, {"uid": "github/toros-astro/corral", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/corral", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/corral"}, {"uid": "github/toros-astro/astroalign-legacy", "html_url": "https://rseng.github.io/software/repository/github/toros-astro/astroalign-legacy", "api_url": "https://rseng.github.io/software/api/repos/github/toros-astro/astroalign-legacy"}, {"uid": "github/tingyuansen/The_Payne", "html_url": "https://rseng.github.io/software/repository/github/tingyuansen/The_Payne", "api_url": "https://rseng.github.io/software/api/repos/github/tingyuansen/The_Payne"}, {"uid": "github/MRChemSoft/mrchem", "html_url": "https://rseng.github.io/software/repository/github/MRChemSoft/mrchem", "api_url": "https://rseng.github.io/software/api/repos/github/MRChemSoft/mrchem"}, {"uid": "github/esteinig/nanoq", "html_url": "https://rseng.github.io/software/repository/github/esteinig/nanoq", "api_url": "https://rseng.github.io/software/api/repos/github/esteinig/nanoq"}, {"uid": "github/pybamm-team/liionpack", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/liionpack", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/liionpack"}, {"uid": "github/pybamm-team/PyBaMM", "html_url": "https://rseng.github.io/software/repository/github/pybamm-team/PyBaMM", "api_url": "https://rseng.github.io/software/api/repos/github/pybamm-team/PyBaMM"}, {"uid": "github/dgobbi/vtk-dicom", "html_url": "https://rseng.github.io/software/repository/github/dgobbi/vtk-dicom", "api_url": "https://rseng.github.io/software/api/repos/github/dgobbi/vtk-dicom"}, {"uid": "github/denglab/SeqSero", "html_url": "https://rseng.github.io/software/repository/github/denglab/SeqSero", "api_url": "https://rseng.github.io/software/api/repos/github/denglab/SeqSero"}, {"uid": "github/Cambridge-ICCS/FTorch", "html_url": "https://rseng.github.io/software/repository/github/Cambridge-ICCS/FTorch", "api_url": "https://rseng.github.io/software/api/repos/github/Cambridge-ICCS/FTorch"}, {"uid": "github/harrispopgen/mutyper", "html_url": "https://rseng.github.io/software/repository/github/harrispopgen/mutyper", "api_url": "https://rseng.github.io/software/api/repos/github/harrispopgen/mutyper"}, {"uid": "github/AbeelLab/lorikeet", "html_url": "https://rseng.github.io/software/repository/github/AbeelLab/lorikeet", "api_url": "https://rseng.github.io/software/api/repos/github/AbeelLab/lorikeet"}, {"uid": "github/sandialabs/pvOps", "html_url": "https://rseng.github.io/software/repository/github/sandialabs/pvOps", "api_url": "https://rseng.github.io/software/api/repos/github/sandialabs/pvOps"}, {"uid": "github/nimble-dev/nimbleHMC", "html_url": "https://rseng.github.io/software/repository/github/nimble-dev/nimbleHMC", "api_url": "https://rseng.github.io/software/api/repos/github/nimble-dev/nimbleHMC"}, {"uid": "github/savila/halogen", "html_url": "https://rseng.github.io/software/repository/github/savila/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/savila/halogen"}, {"uid": "github/ReSurfEMG/ReSurfEMG", "html_url": "https://rseng.github.io/software/repository/github/ReSurfEMG/ReSurfEMG", "api_url": "https://rseng.github.io/software/api/repos/github/ReSurfEMG/ReSurfEMG"}, {"uid": "github/JuliaManifolds/Manopt.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaManifolds/Manopt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaManifolds/Manopt.jl"}, {"uid": "github/Huracan-project/huracanpy", "html_url": "https://rseng.github.io/software/repository/github/Huracan-project/huracanpy", "api_url": "https://rseng.github.io/software/api/repos/github/Huracan-project/huracanpy"}, {"uid": "github/0x0f0f0f/Metatheory.jl", "html_url": "https://rseng.github.io/software/repository/github/0x0f0f0f/Metatheory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/0x0f0f0f/Metatheory.jl"}, {"uid": "github/adtzlr/felupe", "html_url": "https://rseng.github.io/software/repository/github/adtzlr/felupe", "api_url": "https://rseng.github.io/software/api/repos/github/adtzlr/felupe"}, {"uid": "github/thetisproject/thetis", "html_url": "https://rseng.github.io/software/repository/github/thetisproject/thetis", "api_url": "https://rseng.github.io/software/api/repos/github/thetisproject/thetis"}, {"uid": "github/BodeTobias/AutoPDEx", "html_url": "https://rseng.github.io/software/repository/github/BodeTobias/AutoPDEx", "api_url": "https://rseng.github.io/software/api/repos/github/BodeTobias/AutoPDEx"}, {"uid": "github/ahoward-cf/ppmap", "html_url": "https://rseng.github.io/software/repository/github/ahoward-cf/ppmap", "api_url": "https://rseng.github.io/software/api/repos/github/ahoward-cf/ppmap"}, {"uid": "github/GreenBankObservatory/gbtgridder", "html_url": "https://rseng.github.io/software/repository/github/GreenBankObservatory/gbtgridder", "api_url": "https://rseng.github.io/software/api/repos/github/GreenBankObservatory/gbtgridder"}, {"uid": "github/stevengj/nlopt", "html_url": "https://rseng.github.io/software/repository/github/stevengj/nlopt", "api_url": "https://rseng.github.io/software/api/repos/github/stevengj/nlopt"}, {"uid": "github/BGI-Qingdao/TGS-GapCloser", "html_url": "https://rseng.github.io/software/repository/github/BGI-Qingdao/TGS-GapCloser", "api_url": "https://rseng.github.io/software/api/repos/github/BGI-Qingdao/TGS-GapCloser"}, {"uid": "github/tinawunderlich/MultichannelGPR", "html_url": "https://rseng.github.io/software/repository/github/tinawunderlich/MultichannelGPR", "api_url": "https://rseng.github.io/software/api/repos/github/tinawunderlich/MultichannelGPR"}, {"uid": "github/tessgi/tvguide", "html_url": "https://rseng.github.io/software/repository/github/tessgi/tvguide", "api_url": "https://rseng.github.io/software/api/repos/github/tessgi/tvguide"}, {"uid": "github/cweniger/swordfish", "html_url": "https://rseng.github.io/software/repository/github/cweniger/swordfish", "api_url": "https://rseng.github.io/software/api/repos/github/cweniger/swordfish"}, {"uid": "github/mmore500/hstrat", "html_url": "https://rseng.github.io/software/repository/github/mmore500/hstrat", "api_url": "https://rseng.github.io/software/api/repos/github/mmore500/hstrat"}, {"uid": "github/dkn16/H21F", "html_url": "https://rseng.github.io/software/repository/github/dkn16/H21F", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/H21F"}, {"uid": "github/dkn16/Synax", "html_url": "https://rseng.github.io/software/repository/github/dkn16/Synax", "api_url": "https://rseng.github.io/software/api/repos/github/dkn16/Synax"}, {"uid": "github/nsoranzo/sspace_basic", "html_url": "https://rseng.github.io/software/repository/github/nsoranzo/sspace_basic", "api_url": "https://rseng.github.io/software/api/repos/github/nsoranzo/sspace_basic"}, {"uid": "github/aertslab/pySCENIC", "html_url": "https://rseng.github.io/software/repository/github/aertslab/pySCENIC", "api_url": "https://rseng.github.io/software/api/repos/github/aertslab/pySCENIC"}, {"uid": "github/mentatpsi/OSGenome", "html_url": "https://rseng.github.io/software/repository/github/mentatpsi/OSGenome", "api_url": "https://rseng.github.io/software/api/repos/github/mentatpsi/OSGenome"}, {"uid": "github/pysat/pysat", "html_url": "https://rseng.github.io/software/repository/github/pysat/pysat", "api_url": "https://rseng.github.io/software/api/repos/github/pysat/pysat"}, {"uid": "github/yqiuu/spectuner", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/spectuner", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/spectuner"}, {"uid": "github/yqiuu/starduster", "html_url": "https://rseng.github.io/software/repository/github/yqiuu/starduster", "api_url": "https://rseng.github.io/software/api/repos/github/yqiuu/starduster"}, {"uid": "github/alixlam/fmristroke", "html_url": "https://rseng.github.io/software/repository/github/alixlam/fmristroke", "api_url": "https://rseng.github.io/software/api/repos/github/alixlam/fmristroke"}, {"uid": "github/mdsufz/MuDoGeR", "html_url": "https://rseng.github.io/software/repository/github/mdsufz/MuDoGeR", "api_url": "https://rseng.github.io/software/api/repos/github/mdsufz/MuDoGeR"}, {"uid": "github/htjb/globalemu", "html_url": "https://rseng.github.io/software/repository/github/htjb/globalemu", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/globalemu"}, {"uid": "github/htjb/margarine", "html_url": "https://rseng.github.io/software/repository/github/htjb/margarine", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/margarine"}, {"uid": "github/htjb/maxsmooth", "html_url": "https://rseng.github.io/software/repository/github/htjb/maxsmooth", "api_url": "https://rseng.github.io/software/api/repos/github/htjb/maxsmooth"}, {"uid": "github/klee/klee", "html_url": "https://rseng.github.io/software/repository/github/klee/klee", "api_url": "https://rseng.github.io/software/api/repos/github/klee/klee"}, {"uid": "github/oscaribv/citlalicue", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/citlalicue", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/citlalicue"}, {"uid": "github/oscaribv/pyaneti", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/pyaneti", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/pyaneti"}, {"uid": "github/oscaribv/exotrending", "html_url": "https://rseng.github.io/software/repository/github/oscaribv/exotrending", "api_url": "https://rseng.github.io/software/api/repos/github/oscaribv/exotrending"}, {"uid": "github/tcallister/autoregressive-bbh-inference", "html_url": "https://rseng.github.io/software/repository/github/tcallister/autoregressive-bbh-inference", "api_url": "https://rseng.github.io/software/api/repos/github/tcallister/autoregressive-bbh-inference"}, {"uid": "github/PNNL-m-q/mza", "html_url": "https://rseng.github.io/software/repository/github/PNNL-m-q/mza", "api_url": "https://rseng.github.io/software/api/repos/github/PNNL-m-q/mza"}, {"uid": "github/PopovIILab/KrakenParser", "html_url": "https://rseng.github.io/software/repository/github/PopovIILab/KrakenParser", "api_url": "https://rseng.github.io/software/api/repos/github/PopovIILab/KrakenParser"}, {"uid": "github/eggnogdb/eggnog-mapper", "html_url": "https://rseng.github.io/software/repository/github/eggnogdb/eggnog-mapper", "api_url": "https://rseng.github.io/software/api/repos/github/eggnogdb/eggnog-mapper"}, {"uid": "github/0xCoto/Virgo", "html_url": "https://rseng.github.io/software/repository/github/0xCoto/Virgo", "api_url": "https://rseng.github.io/software/api/repos/github/0xCoto/Virgo"}, {"uid": "github/jumphone/inferloop", "html_url": "https://rseng.github.io/software/repository/github/jumphone/inferloop", "api_url": "https://rseng.github.io/software/api/repos/github/jumphone/inferloop"}, {"uid": "github/aztekas-code/aztekas-main", "html_url": "https://rseng.github.io/software/repository/github/aztekas-code/aztekas-main", "api_url": "https://rseng.github.io/software/api/repos/github/aztekas-code/aztekas-main"}, {"uid": "github/AncientNLP/potnia", "html_url": "https://rseng.github.io/software/repository/github/AncientNLP/potnia", "api_url": "https://rseng.github.io/software/api/repos/github/AncientNLP/potnia"}, {"uid": "github/maddataanalyst/hextractor", "html_url": "https://rseng.github.io/software/repository/github/maddataanalyst/hextractor", "api_url": "https://rseng.github.io/software/api/repos/github/maddataanalyst/hextractor"}, {"uid": "github/hyperopt/hyperopt", "html_url": "https://rseng.github.io/software/repository/github/hyperopt/hyperopt", "api_url": "https://rseng.github.io/software/api/repos/github/hyperopt/hyperopt"}, {"uid": "github/AP6YC/AdaptiveResonance.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/AdaptiveResonance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/AdaptiveResonance.jl"}, {"uid": "github/AP6YC/ClusterValidityIndices.jl", "html_url": "https://rseng.github.io/software/repository/github/AP6YC/ClusterValidityIndices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/AP6YC/ClusterValidityIndices.jl"}, {"uid": "github/BjoernBiltzinger/pyspi", "html_url": "https://rseng.github.io/software/repository/github/BjoernBiltzinger/pyspi", "api_url": "https://rseng.github.io/software/api/repos/github/BjoernBiltzinger/pyspi"}, {"uid": "github/Imperial-visualizations/Physics-Visualizations", "html_url": "https://rseng.github.io/software/repository/github/Imperial-visualizations/Physics-Visualizations", "api_url": "https://rseng.github.io/software/api/repos/github/Imperial-visualizations/Physics-Visualizations"}, {"uid": "github/WBK-Robotics/pybullet_industrial", "html_url": "https://rseng.github.io/software/repository/github/WBK-Robotics/pybullet_industrial", "api_url": "https://rseng.github.io/software/api/repos/github/WBK-Robotics/pybullet_industrial"}, {"uid": "github/AemulusProject/bias_emulator", "html_url": "https://rseng.github.io/software/repository/github/AemulusProject/bias_emulator", "api_url": "https://rseng.github.io/software/api/repos/github/AemulusProject/bias_emulator"}, {"uid": "github/FastMLC/fMLC", "html_url": "https://rseng.github.io/software/repository/github/FastMLC/fMLC", "api_url": "https://rseng.github.io/software/api/repos/github/FastMLC/fMLC"}, {"uid": "github/Pizzuti92/MG-MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/github/Pizzuti92/MG-MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/github/Pizzuti92/MG-MAMPOSSt"}, {"uid": "github/rae-holcomb/SpinSpotter", "html_url": "https://rseng.github.io/software/repository/github/rae-holcomb/SpinSpotter", "api_url": "https://rseng.github.io/software/api/repos/github/rae-holcomb/SpinSpotter"}, {"uid": "github/ajosephy/Clustering", "html_url": "https://rseng.github.io/software/repository/github/ajosephy/Clustering", "api_url": "https://rseng.github.io/software/api/repos/github/ajosephy/Clustering"}, {"uid": "github/ashleyblawas/respdetect", "html_url": "https://rseng.github.io/software/repository/github/ashleyblawas/respdetect", "api_url": "https://rseng.github.io/software/api/repos/github/ashleyblawas/respdetect"}, {"uid": "github/BU-ISCIII/taranis", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/taranis", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/taranis"}, {"uid": "github/BU-ISCIII/plasmidID", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/plasmidID", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/plasmidID"}, {"uid": "github/BU-ISCIII/iSkyLIMS", "html_url": "https://rseng.github.io/software/repository/github/BU-ISCIII/iSkyLIMS", "api_url": "https://rseng.github.io/software/api/repos/github/BU-ISCIII/iSkyLIMS"}, {"uid": "github/cpiaulet/smint", "html_url": "https://rseng.github.io/software/repository/github/cpiaulet/smint", "api_url": "https://rseng.github.io/software/api/repos/github/cpiaulet/smint"}, {"uid": "github/spexod/iSLAT", "html_url": "https://rseng.github.io/software/repository/github/spexod/iSLAT", "api_url": "https://rseng.github.io/software/api/repos/github/spexod/iSLAT"}, {"uid": "github/PhaseTracer/PhaseTracer", "html_url": "https://rseng.github.io/software/repository/github/PhaseTracer/PhaseTracer", "api_url": "https://rseng.github.io/software/api/repos/github/PhaseTracer/PhaseTracer"}, {"uid": "github/PEREGRINE-GW/saqqara", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/saqqara", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/saqqara"}, {"uid": "github/PEREGRINE-GW/peregrine", "html_url": "https://rseng.github.io/software/repository/github/PEREGRINE-GW/peregrine", "api_url": "https://rseng.github.io/software/api/repos/github/PEREGRINE-GW/peregrine"}, {"uid": "github/brainets/frites", "html_url": "https://rseng.github.io/software/repository/github/brainets/frites", "api_url": "https://rseng.github.io/software/api/repos/github/brainets/frites"}, {"uid": "github/miguelcarcamov/csromer", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/csromer", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/csromer"}, {"uid": "github/miguelcarcamov/gpuvmem", "html_url": "https://rseng.github.io/software/repository/github/miguelcarcamov/gpuvmem", "api_url": "https://rseng.github.io/software/api/repos/github/miguelcarcamov/gpuvmem"}, {"uid": "github/markmbaum/GEOCLIM.jl", "html_url": "https://rseng.github.io/software/repository/github/markmbaum/GEOCLIM.jl", "api_url": "https://rseng.github.io/software/api/repos/github/markmbaum/GEOCLIM.jl"}, {"uid": "github/narunlifescience/runcircos-gui", "html_url": "https://rseng.github.io/software/repository/github/narunlifescience/runcircos-gui", "api_url": "https://rseng.github.io/software/api/repos/github/narunlifescience/runcircos-gui"}, {"uid": "github/mind-inria/mri-nufft", "html_url": "https://rseng.github.io/software/repository/github/mind-inria/mri-nufft", "api_url": "https://rseng.github.io/software/api/repos/github/mind-inria/mri-nufft"}, {"uid": "github/snowformatics/macrobot", "html_url": "https://rseng.github.io/software/repository/github/snowformatics/macrobot", "api_url": "https://rseng.github.io/software/api/repos/github/snowformatics/macrobot"}, {"uid": "github/pennsignals/chime", "html_url": "https://rseng.github.io/software/repository/github/pennsignals/chime", "api_url": "https://rseng.github.io/software/api/repos/github/pennsignals/chime"}, {"uid": "github/KULL-Centre/DEERpredict", "html_url": "https://rseng.github.io/software/repository/github/KULL-Centre/DEERpredict", "api_url": "https://rseng.github.io/software/api/repos/github/KULL-Centre/DEERpredict"}, {"uid": "github/scipy/scipy", "html_url": "https://rseng.github.io/software/repository/github/scipy/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/scipy/scipy"}, {"uid": "github/munich-quantum-toolkit/core", "html_url": "https://rseng.github.io/software/repository/github/munich-quantum-toolkit/core", "api_url": "https://rseng.github.io/software/api/repos/github/munich-quantum-toolkit/core"}, {"uid": "github/winger/hawking_net", "html_url": "https://rseng.github.io/software/repository/github/winger/hawking_net", "api_url": "https://rseng.github.io/software/api/repos/github/winger/hawking_net"}, {"uid": "github/tresoldi/ngesh", "html_url": "https://rseng.github.io/software/repository/github/tresoldi/ngesh", "api_url": "https://rseng.github.io/software/api/repos/github/tresoldi/ngesh"}, {"uid": "github/Junwu302/HiFun", "html_url": "https://rseng.github.io/software/repository/github/Junwu302/HiFun", "api_url": "https://rseng.github.io/software/api/repos/github/Junwu302/HiFun"}, {"uid": "github/iipharma/pharmamind-molminer", "html_url": "https://rseng.github.io/software/repository/github/iipharma/pharmamind-molminer", "api_url": "https://rseng.github.io/software/api/repos/github/iipharma/pharmamind-molminer"}, {"uid": "github/jGetMove/jGetMove", "html_url": "https://rseng.github.io/software/repository/github/jGetMove/jGetMove", "api_url": "https://rseng.github.io/software/api/repos/github/jGetMove/jGetMove"}, {"uid": "github/insilico/cncv", "html_url": "https://rseng.github.io/software/repository/github/insilico/cncv", "api_url": "https://rseng.github.io/software/api/repos/github/insilico/cncv"}, {"uid": "github/PatrickJTaylor/pengWann", "html_url": "https://rseng.github.io/software/repository/github/PatrickJTaylor/pengWann", "api_url": "https://rseng.github.io/software/api/repos/github/PatrickJTaylor/pengWann"}, {"uid": "github/patscott/gambit_1.3", "html_url": "https://rseng.github.io/software/repository/github/patscott/gambit_1.3", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/gambit_1.3"}, {"uid": "github/patscott/ddcalc", "html_url": "https://rseng.github.io/software/repository/github/patscott/ddcalc", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/ddcalc"}, {"uid": "github/patscott/pippi", "html_url": "https://rseng.github.io/software/repository/github/patscott/pippi", "api_url": "https://rseng.github.io/software/api/repos/github/patscott/pippi"}, {"uid": "github/AprilYuge/ResPAN", "html_url": "https://rseng.github.io/software/repository/github/AprilYuge/ResPAN", "api_url": "https://rseng.github.io/software/api/repos/github/AprilYuge/ResPAN"}, {"uid": "github/shinichiroando/sashimi-c", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-c", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-c"}, {"uid": "github/shinichiroando/sashimi-w", "html_url": "https://rseng.github.io/software/repository/github/shinichiroando/sashimi-w", "api_url": "https://rseng.github.io/software/api/repos/github/shinichiroando/sashimi-w"}, {"uid": "github/freqtrade/freqtrade", "html_url": "https://rseng.github.io/software/repository/github/freqtrade/freqtrade", "api_url": "https://rseng.github.io/software/api/repos/github/freqtrade/freqtrade"}, {"uid": "github/danielkoll/PyRADS", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/PyRADS", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/PyRADS"}, {"uid": "github/danielkoll/tidally-locked-coordinates", "html_url": "https://rseng.github.io/software/repository/github/danielkoll/tidally-locked-coordinates", "api_url": "https://rseng.github.io/software/api/repos/github/danielkoll/tidally-locked-coordinates"}, {"uid": "github/sina-cb/Tn-seqExplorer", "html_url": "https://rseng.github.io/software/repository/github/sina-cb/Tn-seqExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/sina-cb/Tn-seqExplorer"}, {"uid": "github/gijut/gnucash", "html_url": "https://rseng.github.io/software/repository/github/gijut/gnucash", "api_url": "https://rseng.github.io/software/api/repos/github/gijut/gnucash"}, {"uid": "github/FZJ-PGI-12/QAOA.jl", "html_url": "https://rseng.github.io/software/repository/github/FZJ-PGI-12/QAOA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/FZJ-PGI-12/QAOA.jl"}, {"uid": "github/dpalmasan/TRUNAJOD2.0", "html_url": "https://rseng.github.io/software/repository/github/dpalmasan/TRUNAJOD2.0", "api_url": "https://rseng.github.io/software/api/repos/github/dpalmasan/TRUNAJOD2.0"}, {"uid": "github/afarahi/PoPE", "html_url": "https://rseng.github.io/software/repository/github/afarahi/PoPE", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/PoPE"}, {"uid": "github/afarahi/kllr", "html_url": "https://rseng.github.io/software/repository/github/afarahi/kllr", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/kllr"}, {"uid": "github/afarahi/tatter", "html_url": "https://rseng.github.io/software/repository/github/afarahi/tatter", "api_url": "https://rseng.github.io/software/api/repos/github/afarahi/tatter"}, {"uid": "github/sims-lab/CapCruncher", "html_url": "https://rseng.github.io/software/repository/github/sims-lab/CapCruncher", "api_url": "https://rseng.github.io/software/api/repos/github/sims-lab/CapCruncher"}, {"uid": "github/pirl-unc/ace", "html_url": "https://rseng.github.io/software/repository/github/pirl-unc/ace", "api_url": "https://rseng.github.io/software/api/repos/github/pirl-unc/ace"}, {"uid": "github/caselawanalytics/CaseLawAnalytics", "html_url": "https://rseng.github.io/software/repository/github/caselawanalytics/CaseLawAnalytics", "api_url": "https://rseng.github.io/software/api/repos/github/caselawanalytics/CaseLawAnalytics"}, {"uid": "github/r-spatialecology/shar", "html_url": "https://rseng.github.io/software/repository/github/r-spatialecology/shar", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatialecology/shar"}, {"uid": "github/nvanalfen/halotools", "html_url": "https://rseng.github.io/software/repository/github/nvanalfen/halotools", "api_url": "https://rseng.github.io/software/api/repos/github/nvanalfen/halotools"}, {"uid": "github/BrockWW/BubbleFindingAlgorithm", "html_url": "https://rseng.github.io/software/repository/github/BrockWW/BubbleFindingAlgorithm", "api_url": "https://rseng.github.io/software/api/repos/github/BrockWW/BubbleFindingAlgorithm"}, {"uid": "github/UoMMIB/TFBMiner", "html_url": "https://rseng.github.io/software/repository/github/UoMMIB/TFBMiner", "api_url": "https://rseng.github.io/software/api/repos/github/UoMMIB/TFBMiner"}, {"uid": "github/ncbi/igblast", "html_url": "https://rseng.github.io/software/repository/github/ncbi/igblast", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/igblast"}, {"uid": "github/ncbi/SKESA", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SKESA", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SKESA"}, {"uid": "github/ncbi/sra-tools", "html_url": "https://rseng.github.io/software/repository/github/ncbi/sra-tools", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/sra-tools"}, {"uid": "github/ncbi/ncbi-vdb", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ncbi-vdb", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ncbi-vdb"}, {"uid": "github/ncbi/TPMCalculator", "html_url": "https://rseng.github.io/software/repository/github/ncbi/TPMCalculator", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/TPMCalculator"}, {"uid": "github/ncbi/datasets", "html_url": "https://rseng.github.io/software/repository/github/ncbi/datasets", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/datasets"}, {"uid": "github/ncbi/ngs", "html_url": "https://rseng.github.io/software/repository/github/ncbi/ngs", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/ngs"}, {"uid": "github/ncbi/SRPRISM", "html_url": "https://rseng.github.io/software/repository/github/ncbi/SRPRISM", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/SRPRISM"}, {"uid": "github/ncbi/BAMscale", "html_url": "https://rseng.github.io/software/repository/github/ncbi/BAMscale", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/BAMscale"}, {"uid": "github/ncbi/vadr", "html_url": "https://rseng.github.io/software/repository/github/ncbi/vadr", "api_url": "https://rseng.github.io/software/api/repos/github/ncbi/vadr"}, {"uid": "github/auckland-cosmo/interp-mc", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/interp-mc", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/interp-mc"}, {"uid": "github/auckland-cosmo/defrost-mpi", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/defrost-mpi", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/defrost-mpi"}, {"uid": "github/auckland-cosmo/PyUltraLight", "html_url": "https://rseng.github.io/software/repository/github/auckland-cosmo/PyUltraLight", "api_url": "https://rseng.github.io/software/api/repos/github/auckland-cosmo/PyUltraLight"}, {"uid": "github/research-software-directory/research-software-directory", "html_url": "https://rseng.github.io/software/repository/github/research-software-directory/research-software-directory", "api_url": "https://rseng.github.io/software/api/repos/github/research-software-directory/research-software-directory"}, {"uid": "github/nutjunkie/IQmol", "html_url": "https://rseng.github.io/software/repository/github/nutjunkie/IQmol", "api_url": "https://rseng.github.io/software/api/repos/github/nutjunkie/IQmol"}, {"uid": "github/weecology/retriever", "html_url": "https://rseng.github.io/software/repository/github/weecology/retriever", "api_url": "https://rseng.github.io/software/api/repos/github/weecology/retriever"}, {"uid": "github/alstat/ALUES", "html_url": "https://rseng.github.io/software/repository/github/alstat/ALUES", "api_url": "https://rseng.github.io/software/api/repos/github/alstat/ALUES"}, {"uid": "github/yuguangchen1/KcwiKit", "html_url": "https://rseng.github.io/software/repository/github/yuguangchen1/KcwiKit", "api_url": "https://rseng.github.io/software/api/repos/github/yuguangchen1/KcwiKit"}, {"uid": "github/occupationMeasurement/occupationMeasurement", "html_url": "https://rseng.github.io/software/repository/github/occupationMeasurement/occupationMeasurement", "api_url": "https://rseng.github.io/software/api/repos/github/occupationMeasurement/occupationMeasurement"}, {"uid": "github/PhilippJunk/homelette", "html_url": "https://rseng.github.io/software/repository/github/PhilippJunk/homelette", "api_url": "https://rseng.github.io/software/api/repos/github/PhilippJunk/homelette"}, {"uid": "github/PfizerRD/sit2standpy", "html_url": "https://rseng.github.io/software/repository/github/PfizerRD/sit2standpy", "api_url": "https://rseng.github.io/software/api/repos/github/PfizerRD/sit2standpy"}, {"uid": "github/hyriver/hysetter", "html_url": "https://rseng.github.io/software/repository/github/hyriver/hysetter", "api_url": "https://rseng.github.io/software/api/repos/github/hyriver/hysetter"}, {"uid": "github/CM2S/piglot", "html_url": "https://rseng.github.io/software/repository/github/CM2S/piglot", "api_url": "https://rseng.github.io/software/api/repos/github/CM2S/piglot"}, {"uid": "github/lucatelli/morphen", "html_url": "https://rseng.github.io/software/repository/github/lucatelli/morphen", "api_url": "https://rseng.github.io/software/api/repos/github/lucatelli/morphen"}, {"uid": "github/bioturing/hera", "html_url": "https://rseng.github.io/software/repository/github/bioturing/hera", "api_url": "https://rseng.github.io/software/api/repos/github/bioturing/hera"}, {"uid": "github/davideamato/NAPLES", "html_url": "https://rseng.github.io/software/repository/github/davideamato/NAPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davideamato/NAPLES"}, {"uid": "github/thomas0809/MolScribe", "html_url": "https://rseng.github.io/software/repository/github/thomas0809/MolScribe", "api_url": "https://rseng.github.io/software/api/repos/github/thomas0809/MolScribe"}, {"uid": "github/matthiasdemuzere/w2w", "html_url": "https://rseng.github.io/software/repository/github/matthiasdemuzere/w2w", "api_url": "https://rseng.github.io/software/api/repos/github/matthiasdemuzere/w2w"}, {"uid": "github/sstadick/perbase", "html_url": "https://rseng.github.io/software/repository/github/sstadick/perbase", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/perbase"}, {"uid": "github/sstadick/crabz", "html_url": "https://rseng.github.io/software/repository/github/sstadick/crabz", "api_url": "https://rseng.github.io/software/api/repos/github/sstadick/crabz"}, {"uid": "github/fxwiegand/predictosaurus", "html_url": "https://rseng.github.io/software/repository/github/fxwiegand/predictosaurus", "api_url": "https://rseng.github.io/software/api/repos/github/fxwiegand/predictosaurus"}, {"uid": "github/RainthunderWYL/LoRD", "html_url": "https://rseng.github.io/software/repository/github/RainthunderWYL/LoRD", "api_url": "https://rseng.github.io/software/api/repos/github/RainthunderWYL/LoRD"}, {"uid": "github/David-McKenna/udpPacketManager", "html_url": "https://rseng.github.io/software/repository/github/David-McKenna/udpPacketManager", "api_url": "https://rseng.github.io/software/api/repos/github/David-McKenna/udpPacketManager"}, {"uid": "github/NctuICLab/PredCRP", "html_url": "https://rseng.github.io/software/repository/github/NctuICLab/PredCRP", "api_url": "https://rseng.github.io/software/api/repos/github/NctuICLab/PredCRP"}, {"uid": "github/QuantEcon/QuantEcon.py", "html_url": "https://rseng.github.io/software/repository/github/QuantEcon/QuantEcon.py", "api_url": "https://rseng.github.io/software/api/repos/github/QuantEcon/QuantEcon.py"}, {"uid": "github/kim8517/RVSNUpy", "html_url": "https://rseng.github.io/software/repository/github/kim8517/RVSNUpy", "api_url": "https://rseng.github.io/software/api/repos/github/kim8517/RVSNUpy"}, {"uid": "github/sevenstarknight/VariableStarAnalysis", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/VariableStarAnalysis", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/VariableStarAnalysis"}, {"uid": "github/sevenstarknight/SSMM", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/SSMM", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/SSMM"}, {"uid": "github/sevenstarknight/OCDetector", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/OCDetector", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/OCDetector"}, {"uid": "github/sevenstarknight/LINEARSupervisedClassification", "html_url": "https://rseng.github.io/software/repository/github/sevenstarknight/LINEARSupervisedClassification", "api_url": "https://rseng.github.io/software/api/repos/github/sevenstarknight/LINEARSupervisedClassification"}, {"uid": "github/davidemms/OrthoFinder", "html_url": "https://rseng.github.io/software/repository/github/davidemms/OrthoFinder", "api_url": "https://rseng.github.io/software/api/repos/github/davidemms/OrthoFinder"}, {"uid": "github/lyf222/alpconv", "html_url": "https://rseng.github.io/software/repository/github/lyf222/alpconv", "api_url": "https://rseng.github.io/software/api/repos/github/lyf222/alpconv"}, {"uid": "github/jpierel14/snsed", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/snsed", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/snsed"}, {"uid": "github/jpierel14/sntd", "html_url": "https://rseng.github.io/software/repository/github/jpierel14/sntd", "api_url": "https://rseng.github.io/software/api/repos/github/jpierel14/sntd"}, {"uid": "github/atomneb/AtomNeb-py", "html_url": "https://rseng.github.io/software/repository/github/atomneb/AtomNeb-py", "api_url": "https://rseng.github.io/software/api/repos/github/atomneb/AtomNeb-py"}, {"uid": "github/FredHutch/SEACR", "html_url": "https://rseng.github.io/software/repository/github/FredHutch/SEACR", "api_url": "https://rseng.github.io/software/api/repos/github/FredHutch/SEACR"}, {"uid": "github/aconley/simple_cosfitter", "html_url": "https://rseng.github.io/software/repository/github/aconley/simple_cosfitter", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/simple_cosfitter"}, {"uid": "github/aconley/mbb_emcee", "html_url": "https://rseng.github.io/software/repository/github/aconley/mbb_emcee", "api_url": "https://rseng.github.io/software/api/repos/github/aconley/mbb_emcee"}, {"uid": "github/mzy2240/ESA", "html_url": "https://rseng.github.io/software/repository/github/mzy2240/ESA", "api_url": "https://rseng.github.io/software/api/repos/github/mzy2240/ESA"}, {"uid": "github/Martin-Fahrenberger/GTestimate", "html_url": "https://rseng.github.io/software/repository/github/Martin-Fahrenberger/GTestimate", "api_url": "https://rseng.github.io/software/api/repos/github/Martin-Fahrenberger/GTestimate"}, {"uid": "github/cdanielmachado/carveme", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/carveme", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/carveme"}, {"uid": "github/cdanielmachado/reframed", "html_url": "https://rseng.github.io/software/repository/github/cdanielmachado/reframed", "api_url": "https://rseng.github.io/software/api/repos/github/cdanielmachado/reframed"}, {"uid": "github/cosmoinin/MGPT", "html_url": "https://rseng.github.io/software/repository/github/cosmoinin/MGPT", "api_url": "https://rseng.github.io/software/api/repos/github/cosmoinin/MGPT"}, {"uid": "github/otvam/pypeec", "html_url": "https://rseng.github.io/software/repository/github/otvam/pypeec", "api_url": "https://rseng.github.io/software/api/repos/github/otvam/pypeec"}, {"uid": "github/laristra/flecsph", "html_url": "https://rseng.github.io/software/repository/github/laristra/flecsph", "api_url": "https://rseng.github.io/software/api/repos/github/laristra/flecsph"}, {"uid": "github/comp-phys-marc/qasm-ts", "html_url": "https://rseng.github.io/software/repository/github/comp-phys-marc/qasm-ts", "api_url": "https://rseng.github.io/software/api/repos/github/comp-phys-marc/qasm-ts"}, {"uid": "github/prioritizr/wdpar", "html_url": "https://rseng.github.io/software/repository/github/prioritizr/wdpar", "api_url": "https://rseng.github.io/software/api/repos/github/prioritizr/wdpar"}, {"uid": "github/BiomedSciAI/fuse-med-ml", "html_url": "https://rseng.github.io/software/repository/github/BiomedSciAI/fuse-med-ml", "api_url": "https://rseng.github.io/software/api/repos/github/BiomedSciAI/fuse-med-ml"}, {"uid": "github/craddis1/CosmoWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/CosmoWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/CosmoWAP"}, {"uid": "github/craddis1/MathWAP", "html_url": "https://rseng.github.io/software/repository/github/craddis1/MathWAP", "api_url": "https://rseng.github.io/software/api/repos/github/craddis1/MathWAP"}, {"uid": "github/jakeown/astroclover", "html_url": "https://rseng.github.io/software/repository/github/jakeown/astroclover", "api_url": "https://rseng.github.io/software/api/repos/github/jakeown/astroclover"}, {"uid": "github/Jammy2211/PyAutoLens", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoLens", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoLens"}, {"uid": "github/Jammy2211/PyAutoGalaxy", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoGalaxy", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoGalaxy"}, {"uid": "github/Jammy2211/PyAutoCTI", "html_url": "https://rseng.github.io/software/repository/github/Jammy2211/PyAutoCTI", "api_url": "https://rseng.github.io/software/api/repos/github/Jammy2211/PyAutoCTI"}, {"uid": "github/jradcliffe5/multi_self_cal", "html_url": "https://rseng.github.io/software/repository/github/jradcliffe5/multi_self_cal", "api_url": "https://rseng.github.io/software/api/repos/github/jradcliffe5/multi_self_cal"}, {"uid": "github/junkoda/cola_halo", "html_url": "https://rseng.github.io/software/repository/github/junkoda/cola_halo", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/cola_halo"}, {"uid": "github/junkoda/sidm-nbody", "html_url": "https://rseng.github.io/software/repository/github/junkoda/sidm-nbody", "api_url": "https://rseng.github.io/software/api/repos/github/junkoda/sidm-nbody"}, {"uid": "github/pmoulos/metaseqR2", "html_url": "https://rseng.github.io/software/repository/github/pmoulos/metaseqR2", "api_url": "https://rseng.github.io/software/api/repos/github/pmoulos/metaseqR2"}, {"uid": "github/stefanoMP/massiveGST", "html_url": "https://rseng.github.io/software/repository/github/stefanoMP/massiveGST", "api_url": "https://rseng.github.io/software/api/repos/github/stefanoMP/massiveGST"}, {"uid": "github/mcataneo/mochi_class_public", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/mochi_class_public", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/mochi_class_public"}, {"uid": "github/mcataneo/pyLDT-cosmo", "html_url": "https://rseng.github.io/software/repository/github/mcataneo/pyLDT-cosmo", "api_url": "https://rseng.github.io/software/api/repos/github/mcataneo/pyLDT-cosmo"}, {"uid": "github/EdoardoCarlesi/cmbeasy", "html_url": "https://rseng.github.io/software/repository/github/EdoardoCarlesi/cmbeasy", "api_url": "https://rseng.github.io/software/api/repos/github/EdoardoCarlesi/cmbeasy"}, {"uid": "github/PopGenClustering/Clumppling", "html_url": "https://rseng.github.io/software/repository/github/PopGenClustering/Clumppling", "api_url": "https://rseng.github.io/software/api/repos/github/PopGenClustering/Clumppling"}, {"uid": "github/jmsdsouzaPhD/GWDALI", "html_url": "https://rseng.github.io/software/repository/github/jmsdsouzaPhD/GWDALI", "api_url": "https://rseng.github.io/software/api/repos/github/jmsdsouzaPhD/GWDALI"}, {"uid": "github/johentsch/ms3", "html_url": "https://rseng.github.io/software/repository/github/johentsch/ms3", "api_url": "https://rseng.github.io/software/api/repos/github/johentsch/ms3"}, {"uid": "github/flintproject/Flint", "html_url": "https://rseng.github.io/software/repository/github/flintproject/Flint", "api_url": "https://rseng.github.io/software/api/repos/github/flintproject/Flint"}, {"uid": "github/ekaterinailin/AltaiPony", "html_url": "https://rseng.github.io/software/repository/github/ekaterinailin/AltaiPony", "api_url": "https://rseng.github.io/software/api/repos/github/ekaterinailin/AltaiPony"}, {"uid": "github/LabLaskin/MSIGen", "html_url": "https://rseng.github.io/software/repository/github/LabLaskin/MSIGen", "api_url": "https://rseng.github.io/software/api/repos/github/LabLaskin/MSIGen"}, {"uid": "github/wbalmer/backtracks", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtracks", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtracks"}, {"uid": "github/wbalmer/backtrack", "html_url": "https://rseng.github.io/software/repository/github/wbalmer/backtrack", "api_url": "https://rseng.github.io/software/api/repos/github/wbalmer/backtrack"}, {"uid": "github/quantling/pyndl", "html_url": "https://rseng.github.io/software/repository/github/quantling/pyndl", "api_url": "https://rseng.github.io/software/api/repos/github/quantling/pyndl"}, {"uid": "github/turbo-sim/TurboFlow", "html_url": "https://rseng.github.io/software/repository/github/turbo-sim/TurboFlow", "api_url": "https://rseng.github.io/software/api/repos/github/turbo-sim/TurboFlow"}, {"uid": "github/tombisho/dsSyntheticClient", "html_url": "https://rseng.github.io/software/repository/github/tombisho/dsSyntheticClient", "api_url": "https://rseng.github.io/software/api/repos/github/tombisho/dsSyntheticClient"}, {"uid": "github/pmkruyen/dearscholar", "html_url": "https://rseng.github.io/software/repository/github/pmkruyen/dearscholar", "api_url": "https://rseng.github.io/software/api/repos/github/pmkruyen/dearscholar"}, {"uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "html_url": "https://rseng.github.io/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", "api_url": "https://rseng.github.io/software/api/repos/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys"}, {"uid": "github/manchunyeung/wolensing", "html_url": "https://rseng.github.io/software/repository/github/manchunyeung/wolensing", "api_url": "https://rseng.github.io/software/api/repos/github/manchunyeung/wolensing"}, {"uid": "github/gkulkarni/QLF", "html_url": "https://rseng.github.io/software/repository/github/gkulkarni/QLF", "api_url": "https://rseng.github.io/software/api/repos/github/gkulkarni/QLF"}, {"uid": "github/EGaraldi/corecon", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/corecon", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/corecon"}, {"uid": "github/EGaraldi/ZInCo", "html_url": "https://rseng.github.io/software/repository/github/EGaraldi/ZInCo", "api_url": "https://rseng.github.io/software/api/repos/github/EGaraldi/ZInCo"}, {"uid": "github/Shamrock-code/Shamrock", "html_url": "https://rseng.github.io/software/repository/github/Shamrock-code/Shamrock", "api_url": "https://rseng.github.io/software/api/repos/github/Shamrock-code/Shamrock"}, {"uid": "github/awsteiner/bamr", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/bamr", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/bamr"}, {"uid": "github/awsteiner/o2scl", "html_url": "https://rseng.github.io/software/repository/github/awsteiner/o2scl", "api_url": "https://rseng.github.io/software/api/repos/github/awsteiner/o2scl"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts"}, {"uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "html_url": "https://rseng.github.io/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", "api_url": "https://rseng.github.io/software/api/repos/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects"}, {"uid": "github/basehc/IPEV", "html_url": "https://rseng.github.io/software/repository/github/basehc/IPEV", "api_url": "https://rseng.github.io/software/api/repos/github/basehc/IPEV"}, {"uid": "github/CSSEGISandData/COVID-19", "html_url": "https://rseng.github.io/software/repository/github/CSSEGISandData/COVID-19", "api_url": "https://rseng.github.io/software/api/repos/github/CSSEGISandData/COVID-19"}, {"uid": "github/JuliaQuantumControl/GRAPE.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaQuantumControl/GRAPE.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaQuantumControl/GRAPE.jl"}, {"uid": "github/LinkedEarth/pylipd", "html_url": "https://rseng.github.io/software/repository/github/LinkedEarth/pylipd", "api_url": "https://rseng.github.io/software/api/repos/github/LinkedEarth/pylipd"}, {"uid": "github/BradGreig/21CMMC", "html_url": "https://rseng.github.io/software/repository/github/BradGreig/21CMMC", "api_url": "https://rseng.github.io/software/api/repos/github/BradGreig/21CMMC"}, {"uid": "github/pjedge/longshot", "html_url": "https://rseng.github.io/software/repository/github/pjedge/longshot", "api_url": "https://rseng.github.io/software/api/repos/github/pjedge/longshot"}, {"uid": "github/omerveille/VSMOD", "html_url": "https://rseng.github.io/software/repository/github/omerveille/VSMOD", "api_url": "https://rseng.github.io/software/api/repos/github/omerveille/VSMOD"}, {"uid": "github/jdidion/atropos", "html_url": "https://rseng.github.io/software/repository/github/jdidion/atropos", "api_url": "https://rseng.github.io/software/api/repos/github/jdidion/atropos"}, {"uid": "github/dr-joe-wirth/primerForge", "html_url": "https://rseng.github.io/software/repository/github/dr-joe-wirth/primerForge", "api_url": "https://rseng.github.io/software/api/repos/github/dr-joe-wirth/primerForge"}, {"uid": "github/uedaLabR/nanoDoc", "html_url": "https://rseng.github.io/software/repository/github/uedaLabR/nanoDoc", "api_url": "https://rseng.github.io/software/api/repos/github/uedaLabR/nanoDoc"}, {"uid": "github/Yu-Group/simChef", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/simChef", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/simChef"}, {"uid": "github/Yu-Group/veridical-flow", "html_url": "https://rseng.github.io/software/repository/github/Yu-Group/veridical-flow", "api_url": "https://rseng.github.io/software/api/repos/github/Yu-Group/veridical-flow"}, {"uid": "github/phac-nml/biohansel", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/biohansel", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/biohansel"}, {"uid": "github/phac-nml/staramr", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/staramr", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/staramr"}, {"uid": "github/phac-nml/mob-suite", "html_url": "https://rseng.github.io/software/repository/github/phac-nml/mob-suite", "api_url": "https://rseng.github.io/software/api/repos/github/phac-nml/mob-suite"}, {"uid": "github/snugel/cas-offinder", "html_url": "https://rseng.github.io/software/repository/github/snugel/cas-offinder", "api_url": "https://rseng.github.io/software/api/repos/github/snugel/cas-offinder"}, {"uid": "github/fruzsinaagocs/oscode", "html_url": "https://rseng.github.io/software/repository/github/fruzsinaagocs/oscode", "api_url": "https://rseng.github.io/software/api/repos/github/fruzsinaagocs/oscode"}, {"uid": "github/miniufo/xinvert", "html_url": "https://rseng.github.io/software/repository/github/miniufo/xinvert", "api_url": "https://rseng.github.io/software/api/repos/github/miniufo/xinvert"}, {"uid": "github/champsproject/ldds", "html_url": "https://rseng.github.io/software/repository/github/champsproject/ldds", "api_url": "https://rseng.github.io/software/api/repos/github/champsproject/ldds"}, {"uid": "github/mglodge/MANTA-Ray", "html_url": "https://rseng.github.io/software/repository/github/mglodge/MANTA-Ray", "api_url": "https://rseng.github.io/software/api/repos/github/mglodge/MANTA-Ray"}, {"uid": "github/Fenyutanchan/solar-vSI", "html_url": "https://rseng.github.io/software/repository/github/Fenyutanchan/solar-vSI", "api_url": "https://rseng.github.io/software/api/repos/github/Fenyutanchan/solar-vSI"}, {"uid": "github/abinit/abinit", "html_url": "https://rseng.github.io/software/repository/github/abinit/abinit", "api_url": "https://rseng.github.io/software/api/repos/github/abinit/abinit"}, {"uid": "github/jacob-long/jtools", "html_url": "https://rseng.github.io/software/repository/github/jacob-long/jtools", "api_url": "https://rseng.github.io/software/api/repos/github/jacob-long/jtools"}, {"uid": "github/christopher-vollmers/C3POa", "html_url": "https://rseng.github.io/software/repository/github/christopher-vollmers/C3POa", "api_url": "https://rseng.github.io/software/api/repos/github/christopher-vollmers/C3POa"}, {"uid": "github/IDEMSInternational/ExcelToShiny", "html_url": "https://rseng.github.io/software/repository/github/IDEMSInternational/ExcelToShiny", "api_url": "https://rseng.github.io/software/api/repos/github/IDEMSInternational/ExcelToShiny"}, {"uid": "github/sylabs/singularity", "html_url": "https://rseng.github.io/software/repository/github/sylabs/singularity", "api_url": "https://rseng.github.io/software/api/repos/github/sylabs/singularity"}, {"uid": "github/jdeast/EXOFASTv2", "html_url": "https://rseng.github.io/software/repository/github/jdeast/EXOFASTv2", "api_url": "https://rseng.github.io/software/api/repos/github/jdeast/EXOFASTv2"}, {"uid": "github/Nextomics/nextsv", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/nextsv", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/nextsv"}, {"uid": "github/Nextomics/NextDenovo", "html_url": "https://rseng.github.io/software/repository/github/Nextomics/NextDenovo", "api_url": "https://rseng.github.io/software/api/repos/github/Nextomics/NextDenovo"}, {"uid": "github/WhaleConnect/whaleconnect", "html_url": "https://rseng.github.io/software/repository/github/WhaleConnect/whaleconnect", "api_url": "https://rseng.github.io/software/api/repos/github/WhaleConnect/whaleconnect"}, {"uid": "github/aaryapatil/tapify", "html_url": "https://rseng.github.io/software/repository/github/aaryapatil/tapify", "api_url": "https://rseng.github.io/software/api/repos/github/aaryapatil/tapify"}, {"uid": "github/spiketools/spiketools", "html_url": "https://rseng.github.io/software/repository/github/spiketools/spiketools", "api_url": "https://rseng.github.io/software/api/repos/github/spiketools/spiketools"}, {"uid": "github/scwatts/fastspar", "html_url": "https://rseng.github.io/software/repository/github/scwatts/fastspar", "api_url": "https://rseng.github.io/software/api/repos/github/scwatts/fastspar"}, {"uid": "github/Beuth-Erdelt/DBMS-Benchmarker", "html_url": "https://rseng.github.io/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", "api_url": "https://rseng.github.io/software/api/repos/github/Beuth-Erdelt/DBMS-Benchmarker"}, {"uid": "github/tommyau/bamclipper", "html_url": "https://rseng.github.io/software/repository/github/tommyau/bamclipper", "api_url": "https://rseng.github.io/software/api/repos/github/tommyau/bamclipper"}, {"uid": "github/KALMUS-Color-Toolkit/KALMUS", "html_url": "https://rseng.github.io/software/repository/github/KALMUS-Color-Toolkit/KALMUS", "api_url": "https://rseng.github.io/software/api/repos/github/KALMUS-Color-Toolkit/KALMUS"}, {"uid": "github/numba/numba", "html_url": "https://rseng.github.io/software/repository/github/numba/numba", "api_url": "https://rseng.github.io/software/api/repos/github/numba/numba"}, {"uid": "github/rochoa85/NTDHealth_Forms", "html_url": "https://rseng.github.io/software/repository/github/rochoa85/NTDHealth_Forms", "api_url": "https://rseng.github.io/software/api/repos/github/rochoa85/NTDHealth_Forms"}, {"uid": "github/JuliaAI/Imbalance.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaAI/Imbalance.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaAI/Imbalance.jl"}, {"uid": "github/tcollett/LensPop", "html_url": "https://rseng.github.io/software/repository/github/tcollett/LensPop", "api_url": "https://rseng.github.io/software/api/repos/github/tcollett/LensPop"}, {"uid": "github/OceanGenomics/mudskipper", "html_url": "https://rseng.github.io/software/repository/github/OceanGenomics/mudskipper", "api_url": "https://rseng.github.io/software/api/repos/github/OceanGenomics/mudskipper"}, {"uid": "github/gtonkinhill/fastbaps", "html_url": "https://rseng.github.io/software/repository/github/gtonkinhill/fastbaps", "api_url": "https://rseng.github.io/software/api/repos/github/gtonkinhill/fastbaps"}, {"uid": "github/Music-and-Culture-Technology-Lab/omnizart", "html_url": "https://rseng.github.io/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", "api_url": "https://rseng.github.io/software/api/repos/github/Music-and-Culture-Technology-Lab/omnizart"}, {"uid": "github/jmiramont/mcsm-benchs", "html_url": "https://rseng.github.io/software/repository/github/jmiramont/mcsm-benchs", "api_url": "https://rseng.github.io/software/api/repos/github/jmiramont/mcsm-benchs"}, {"uid": "github/basp-group/BUQO", "html_url": "https://rseng.github.io/software/repository/github/basp-group/BUQO", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/BUQO"}, {"uid": "github/basp-group/R2D2-SII", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-SII", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-SII"}, {"uid": "github/basp-group/R2D2-RI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/R2D2-RI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/R2D2-RI"}, {"uid": "github/basp-group/sopt", "html_url": "https://rseng.github.io/software/repository/github/basp-group/sopt", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/sopt"}, {"uid": "github/basp-group/purify", "html_url": "https://rseng.github.io/software/repository/github/basp-group/purify", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/purify"}, {"uid": "github/basp-group/Optical-Interferometry-Trilinear", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Optical-Interferometry-Trilinear", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Optical-Interferometry-Trilinear"}, {"uid": "github/basp-group/AIRI", "html_url": "https://rseng.github.io/software/repository/github/basp-group/AIRI", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/AIRI"}, {"uid": "github/basp-group/faceted-hypersara", "html_url": "https://rseng.github.io/software/repository/github/basp-group/faceted-hypersara", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/faceted-hypersara"}, {"uid": "github/basp-group/SARA-PPD", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-PPD", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-PPD"}, {"uid": "github/basp-group/SARA-dimensionality-reduction", "html_url": "https://rseng.github.io/software/repository/github/basp-group/SARA-dimensionality-reduction", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/SARA-dimensionality-reduction"}, {"uid": "github/basp-group/Puri-Psi", "html_url": "https://rseng.github.io/software/repository/github/basp-group/Puri-Psi", "api_url": "https://rseng.github.io/software/api/repos/github/basp-group/Puri-Psi"}, {"uid": "github/combine-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/combine-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/combine-lab/salmon"}, {"uid": "github/CodeEagle22/SIRITVIS", "html_url": "https://rseng.github.io/software/repository/github/CodeEagle22/SIRITVIS", "api_url": "https://rseng.github.io/software/api/repos/github/CodeEagle22/SIRITVIS"}, {"uid": "github/COSIMA/regional-mom6", "html_url": "https://rseng.github.io/software/repository/github/COSIMA/regional-mom6", "api_url": "https://rseng.github.io/software/api/repos/github/COSIMA/regional-mom6"}, {"uid": "github/moldyn/msmhelper", "html_url": "https://rseng.github.io/software/repository/github/moldyn/msmhelper", "api_url": "https://rseng.github.io/software/api/repos/github/moldyn/msmhelper"}, {"uid": "github/gui11aume/starcode", "html_url": "https://rseng.github.io/software/repository/github/gui11aume/starcode", "api_url": "https://rseng.github.io/software/api/repos/github/gui11aume/starcode"}, {"uid": "github/dkoboldt/varscan", "html_url": "https://rseng.github.io/software/repository/github/dkoboldt/varscan", "api_url": "https://rseng.github.io/software/api/repos/github/dkoboldt/varscan"}, {"uid": "github/jorisparet/partycls", "html_url": "https://rseng.github.io/software/repository/github/jorisparet/partycls", "api_url": "https://rseng.github.io/software/api/repos/github/jorisparet/partycls"}, {"uid": "github/VegeWaterDynamics/motrainer", "html_url": "https://rseng.github.io/software/repository/github/VegeWaterDynamics/motrainer", "api_url": "https://rseng.github.io/software/api/repos/github/VegeWaterDynamics/motrainer"}, {"uid": "github/ZhangGroup-MITChemistry/OpenNucleome", "html_url": "https://rseng.github.io/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", "api_url": "https://rseng.github.io/software/api/repos/github/ZhangGroup-MITChemistry/OpenNucleome"}, {"uid": "github/ridgelab/rampAtlas", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/rampAtlas", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/rampAtlas"}, {"uid": "github/ridgelab/ExtRampOnline", "html_url": "https://rseng.github.io/software/repository/github/ridgelab/ExtRampOnline", "api_url": "https://rseng.github.io/software/api/repos/github/ridgelab/ExtRampOnline"}, {"uid": "github/dhubber/seren", "html_url": "https://rseng.github.io/software/repository/github/dhubber/seren", "api_url": "https://rseng.github.io/software/api/repos/github/dhubber/seren"}, {"uid": "github/labgem/PPanGGOLiN", "html_url": "https://rseng.github.io/software/repository/github/labgem/PPanGGOLiN", "api_url": "https://rseng.github.io/software/api/repos/github/labgem/PPanGGOLiN"}, {"uid": "github/VMBoehm/MADLens", "html_url": "https://rseng.github.io/software/repository/github/VMBoehm/MADLens", "api_url": "https://rseng.github.io/software/api/repos/github/VMBoehm/MADLens"}, {"uid": "github/mbillingr/libgdf", "html_url": "https://rseng.github.io/software/repository/github/mbillingr/libgdf", "api_url": "https://rseng.github.io/software/api/repos/github/mbillingr/libgdf"}, {"uid": "github/streamlit/streamlit", "html_url": "https://rseng.github.io/software/repository/github/streamlit/streamlit", "api_url": "https://rseng.github.io/software/api/repos/github/streamlit/streamlit"}, {"uid": "github/vembrane/vembrane", "html_url": "https://rseng.github.io/software/repository/github/vembrane/vembrane", "api_url": "https://rseng.github.io/software/api/repos/github/vembrane/vembrane"}, {"uid": "github/statgen/popscle", "html_url": "https://rseng.github.io/software/repository/github/statgen/popscle", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/popscle"}, {"uid": "github/statgen/Minimac4", "html_url": "https://rseng.github.io/software/repository/github/statgen/Minimac4", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/Minimac4"}, {"uid": "github/statgen/demuxlet", "html_url": "https://rseng.github.io/software/repository/github/statgen/demuxlet", "api_url": "https://rseng.github.io/software/api/repos/github/statgen/demuxlet"}, {"uid": "github/vortex-exoplanet/VIP", "html_url": "https://rseng.github.io/software/repository/github/vortex-exoplanet/VIP", "api_url": "https://rseng.github.io/software/api/repos/github/vortex-exoplanet/VIP"}, {"uid": "github/jonotuke/BREADR", "html_url": "https://rseng.github.io/software/repository/github/jonotuke/BREADR", "api_url": "https://rseng.github.io/software/api/repos/github/jonotuke/BREADR"}, {"uid": "github/UM-PEPL/HallThruster.jl", "html_url": "https://rseng.github.io/software/repository/github/UM-PEPL/HallThruster.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UM-PEPL/HallThruster.jl"}, {"uid": "github/YaleTHz/nelly", "html_url": "https://rseng.github.io/software/repository/github/YaleTHz/nelly", "api_url": "https://rseng.github.io/software/api/repos/github/YaleTHz/nelly"}, {"uid": "github/msm550/DMATIS", "html_url": "https://rseng.github.io/software/repository/github/msm550/DMATIS", "api_url": "https://rseng.github.io/software/api/repos/github/msm550/DMATIS"}, {"uid": "github/ryanoelkers/DIA", "html_url": "https://rseng.github.io/software/repository/github/ryanoelkers/DIA", "api_url": "https://rseng.github.io/software/api/repos/github/ryanoelkers/DIA"}, {"uid": "github/scottleedavis/googleearthtoolbox", "html_url": "https://rseng.github.io/software/repository/github/scottleedavis/googleearthtoolbox", "api_url": "https://rseng.github.io/software/api/repos/github/scottleedavis/googleearthtoolbox"}, {"uid": "github/davidkipping/MAH", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MAH", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MAH"}, {"uid": "github/davidkipping/MACULA", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/MACULA", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/MACULA"}, {"uid": "github/davidkipping/inversebeta", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/inversebeta", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/inversebeta"}, {"uid": "github/davidkipping/ECCSAMPLES", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/ECCSAMPLES", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/ECCSAMPLES"}, {"uid": "github/davidkipping/flicker", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/flicker", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/flicker"}, {"uid": "github/davidkipping/LDC3", "html_url": "https://rseng.github.io/software/repository/github/davidkipping/LDC3", "api_url": "https://rseng.github.io/software/api/repos/github/davidkipping/LDC3"}, {"uid": "github/nathanaelbosch/ProbNumDiffEq.jl", "html_url": "https://rseng.github.io/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nathanaelbosch/ProbNumDiffEq.jl"}, {"uid": "github/aroffringa/aartfaac2ms", "html_url": "https://rseng.github.io/software/repository/github/aroffringa/aartfaac2ms", "api_url": "https://rseng.github.io/software/api/repos/github/aroffringa/aartfaac2ms"}, {"uid": "github/ARDG-NRAO/LibRA", "html_url": "https://rseng.github.io/software/repository/github/ARDG-NRAO/LibRA", "api_url": "https://rseng.github.io/software/api/repos/github/ARDG-NRAO/LibRA"}, {"uid": "github/domeckert/pyproffit", "html_url": "https://rseng.github.io/software/repository/github/domeckert/pyproffit", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/pyproffit"}, {"uid": "github/domeckert/xmm_simulator", "html_url": "https://rseng.github.io/software/repository/github/domeckert/xmm_simulator", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/xmm_simulator"}, {"uid": "github/domeckert/hydromass", "html_url": "https://rseng.github.io/software/repository/github/domeckert/hydromass", "api_url": "https://rseng.github.io/software/api/repos/github/domeckert/hydromass"}, {"uid": "github/mriener/gausspyplus", "html_url": "https://rseng.github.io/software/repository/github/mriener/gausspyplus", "api_url": "https://rseng.github.io/software/api/repos/github/mriener/gausspyplus"}, {"uid": "github/bodenlab/GRASP", "html_url": "https://rseng.github.io/software/repository/github/bodenlab/GRASP", "api_url": "https://rseng.github.io/software/api/repos/github/bodenlab/GRASP"}, {"uid": "github/ThomasMBury/ewstools", "html_url": "https://rseng.github.io/software/repository/github/ThomasMBury/ewstools", "api_url": "https://rseng.github.io/software/api/repos/github/ThomasMBury/ewstools"}, {"uid": "github/xianggebenben/GraphSL", "html_url": "https://rseng.github.io/software/repository/github/xianggebenben/GraphSL", "api_url": "https://rseng.github.io/software/api/repos/github/xianggebenben/GraphSL"}, {"uid": "github/david-barnett/microViz", "html_url": "https://rseng.github.io/software/repository/github/david-barnett/microViz", "api_url": "https://rseng.github.io/software/api/repos/github/david-barnett/microViz"}, {"uid": "github/CQCL/qujax", "html_url": "https://rseng.github.io/software/repository/github/CQCL/qujax", "api_url": "https://rseng.github.io/software/api/repos/github/CQCL/qujax"}, {"uid": "github/zpliulab/GENELink", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GENELink", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GENELink"}, {"uid": "github/zpliulab/GeoBind", "html_url": "https://rseng.github.io/software/repository/github/zpliulab/GeoBind", "api_url": "https://rseng.github.io/software/api/repos/github/zpliulab/GeoBind"}, {"uid": "github/EbmeyerSt/GEnView", "html_url": "https://rseng.github.io/software/repository/github/EbmeyerSt/GEnView", "api_url": "https://rseng.github.io/software/api/repos/github/EbmeyerSt/GEnView"}, {"uid": "github/kpenev/poet", "html_url": "https://rseng.github.io/software/repository/github/kpenev/poet", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/poet"}, {"uid": "github/kpenev/AutoWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AutoWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AutoWISP"}, {"uid": "github/kpenev/AstroWISP", "html_url": "https://rseng.github.io/software/repository/github/kpenev/AstroWISP", "api_url": "https://rseng.github.io/software/api/repos/github/kpenev/AstroWISP"}, {"uid": "github/BlauGroup/RNMC", "html_url": "https://rseng.github.io/software/repository/github/BlauGroup/RNMC", "api_url": "https://rseng.github.io/software/api/repos/github/BlauGroup/RNMC"}, {"uid": "github/MultiQC/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/MultiQC/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/MultiQC/MultiQC"}, {"uid": "github/antonpannekoek/sunbather", "html_url": "https://rseng.github.io/software/repository/github/antonpannekoek/sunbather", "api_url": "https://rseng.github.io/software/api/repos/github/antonpannekoek/sunbather"}, {"uid": "github/ewatercycle/era5cli", "html_url": "https://rseng.github.io/software/repository/github/ewatercycle/era5cli", "api_url": "https://rseng.github.io/software/api/repos/github/ewatercycle/era5cli"}, {"uid": "github/levuvietphong/pyTCR", "html_url": "https://rseng.github.io/software/repository/github/levuvietphong/pyTCR", "api_url": "https://rseng.github.io/software/api/repos/github/levuvietphong/pyTCR"}, {"uid": "github/AlexMaraio/WeakLensingQML", "html_url": "https://rseng.github.io/software/repository/github/AlexMaraio/WeakLensingQML", "api_url": "https://rseng.github.io/software/api/repos/github/AlexMaraio/WeakLensingQML"}, {"uid": "github/daniellefenech/SERPent", "html_url": "https://rseng.github.io/software/repository/github/daniellefenech/SERPent", "api_url": "https://rseng.github.io/software/api/repos/github/daniellefenech/SERPent"}, {"uid": "github/UM-KevinHe/surtvep", "html_url": "https://rseng.github.io/software/repository/github/UM-KevinHe/surtvep", "api_url": "https://rseng.github.io/software/api/repos/github/UM-KevinHe/surtvep"}, {"uid": "github/mrbell/fsclean", "html_url": "https://rseng.github.io/software/repository/github/mrbell/fsclean", "api_url": "https://rseng.github.io/software/api/repos/github/mrbell/fsclean"}, {"uid": "github/NeuralEnsemble/elephant", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/elephant", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/elephant"}, {"uid": "github/NeuralEnsemble/PyNN", "html_url": "https://rseng.github.io/software/repository/github/NeuralEnsemble/PyNN", "api_url": "https://rseng.github.io/software/api/repos/github/NeuralEnsemble/PyNN"}, {"uid": "github/pikarpov-LANL/Sapsan", "html_url": "https://rseng.github.io/software/repository/github/pikarpov-LANL/Sapsan", "api_url": "https://rseng.github.io/software/api/repos/github/pikarpov-LANL/Sapsan"}, {"uid": "github/MNiwano/Eclaire", "html_url": "https://rseng.github.io/software/repository/github/MNiwano/Eclaire", "api_url": "https://rseng.github.io/software/api/repos/github/MNiwano/Eclaire"}, {"uid": "github/cconroy20/alf", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/alf", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/alf"}, {"uid": "github/cconroy20/fsps", "html_url": "https://rseng.github.io/software/repository/github/cconroy20/fsps", "api_url": "https://rseng.github.io/software/api/repos/github/cconroy20/fsps"}, {"uid": "github/ckay314/OSPREI", "html_url": "https://rseng.github.io/software/repository/github/ckay314/OSPREI", "api_url": "https://rseng.github.io/software/api/repos/github/ckay314/OSPREI"}, {"uid": "github/dartoon/galight", "html_url": "https://rseng.github.io/software/repository/github/dartoon/galight", "api_url": "https://rseng.github.io/software/api/repos/github/dartoon/galight"}, {"uid": "github/jonzink/EDI_Vetter_unplugged", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI_Vetter_unplugged", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI_Vetter_unplugged"}, {"uid": "github/jonzink/EDI-Vetter", "html_url": "https://rseng.github.io/software/repository/github/jonzink/EDI-Vetter", "api_url": "https://rseng.github.io/software/api/repos/github/jonzink/EDI-Vetter"}, {"uid": "github/Zstone19/pypetal", "html_url": "https://rseng.github.io/software/repository/github/Zstone19/pypetal", "api_url": "https://rseng.github.io/software/api/repos/github/Zstone19/pypetal"}, {"uid": "github/voting-tools/pref_voting", "html_url": "https://rseng.github.io/software/repository/github/voting-tools/pref_voting", "api_url": "https://rseng.github.io/software/api/repos/github/voting-tools/pref_voting"}, {"uid": "github/econ-ark/HARK", "html_url": "https://rseng.github.io/software/repository/github/econ-ark/HARK", "api_url": "https://rseng.github.io/software/api/repos/github/econ-ark/HARK"}, {"uid": "github/atakan/KeplerSolver", "html_url": "https://rseng.github.io/software/repository/github/atakan/KeplerSolver", "api_url": "https://rseng.github.io/software/api/repos/github/atakan/KeplerSolver"}, {"uid": "github/smog-server/OpenSMOG", "html_url": "https://rseng.github.io/software/repository/github/smog-server/OpenSMOG", "api_url": "https://rseng.github.io/software/api/repos/github/smog-server/OpenSMOG"}, {"uid": "github/jessecambon/tidygeocoder", "html_url": "https://rseng.github.io/software/repository/github/jessecambon/tidygeocoder", "api_url": "https://rseng.github.io/software/api/repos/github/jessecambon/tidygeocoder"}, {"uid": "github/RBrearton/islatu", "html_url": "https://rseng.github.io/software/repository/github/RBrearton/islatu", "api_url": "https://rseng.github.io/software/api/repos/github/RBrearton/islatu"}, {"uid": "github/spokenlanguage/platalea", "html_url": "https://rseng.github.io/software/repository/github/spokenlanguage/platalea", "api_url": "https://rseng.github.io/software/api/repos/github/spokenlanguage/platalea"}, {"uid": "github/OpenWaterAnalytics/EPyT", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/EPyT", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/EPyT"}, {"uid": "github/OpenWaterAnalytics/pyswmm", "html_url": "https://rseng.github.io/software/repository/github/OpenWaterAnalytics/pyswmm", "api_url": "https://rseng.github.io/software/api/repos/github/OpenWaterAnalytics/pyswmm"}, {"uid": "github/sanjibs/bmcmc", "html_url": "https://rseng.github.io/software/repository/github/sanjibs/bmcmc", "api_url": "https://rseng.github.io/software/api/repos/github/sanjibs/bmcmc"}, {"uid": "github/alejostark/phase_space_cosmo_fisher", "html_url": "https://rseng.github.io/software/repository/github/alejostark/phase_space_cosmo_fisher", "api_url": "https://rseng.github.io/software/api/repos/github/alejostark/phase_space_cosmo_fisher"}, {"uid": "github/kegiljarhus/pyBEMT", "html_url": "https://rseng.github.io/software/repository/github/kegiljarhus/pyBEMT", "api_url": "https://rseng.github.io/software/api/repos/github/kegiljarhus/pyBEMT"}, {"uid": "github/ymaan4/rficlean", "html_url": "https://rseng.github.io/software/repository/github/ymaan4/rficlean", "api_url": "https://rseng.github.io/software/api/repos/github/ymaan4/rficlean"}, {"uid": "github/rhpvorderman/sequali", "html_url": "https://rseng.github.io/software/repository/github/rhpvorderman/sequali", "api_url": "https://rseng.github.io/software/api/repos/github/rhpvorderman/sequali"}, {"uid": "github/AliYoussef96/parazitCUB", "html_url": "https://rseng.github.io/software/repository/github/AliYoussef96/parazitCUB", "api_url": "https://rseng.github.io/software/api/repos/github/AliYoussef96/parazitCUB"}, {"uid": "github/nextstrain/auspice", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/auspice", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/auspice"}, {"uid": "github/nextstrain/nextclade", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/nextclade", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/nextclade"}, {"uid": "github/nextstrain/augur", "html_url": "https://rseng.github.io/software/repository/github/nextstrain/augur", "api_url": "https://rseng.github.io/software/api/repos/github/nextstrain/augur"}, {"uid": "github/N-BodyShop/smooth", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/smooth", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/smooth"}, {"uid": "github/N-BodyShop/fof", "html_url": "https://rseng.github.io/software/repository/github/N-BodyShop/fof", "api_url": "https://rseng.github.io/software/api/repos/github/N-BodyShop/fof"}, {"uid": "github/justinread/gravsphere", "html_url": "https://rseng.github.io/software/repository/github/justinread/gravsphere", "api_url": "https://rseng.github.io/software/api/repos/github/justinread/gravsphere"}, {"uid": "github/dtamayo/reboundx", "html_url": "https://rseng.github.io/software/repository/github/dtamayo/reboundx", "api_url": "https://rseng.github.io/software/api/repos/github/dtamayo/reboundx"}, {"uid": "github/scverse/muon", "html_url": "https://rseng.github.io/software/repository/github/scverse/muon", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/muon"}, {"uid": "github/scverse/scanpy", "html_url": "https://rseng.github.io/software/repository/github/scverse/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/scanpy"}, {"uid": "github/scverse/anndata", "html_url": "https://rseng.github.io/software/repository/github/scverse/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/scverse/anndata"}, {"uid": "github/kinleyid/tempodisco", "html_url": "https://rseng.github.io/software/repository/github/kinleyid/tempodisco", "api_url": "https://rseng.github.io/software/api/repos/github/kinleyid/tempodisco"}, {"uid": "github/Fermipy/fermipy", "html_url": "https://rseng.github.io/software/repository/github/Fermipy/fermipy", "api_url": "https://rseng.github.io/software/api/repos/github/Fermipy/fermipy"}, {"uid": "github/BenNordick/HiLoop", "html_url": "https://rseng.github.io/software/repository/github/BenNordick/HiLoop", "api_url": "https://rseng.github.io/software/api/repos/github/BenNordick/HiLoop"}, {"uid": "github/keck-datareductionpipelines/MosfireDRP", "html_url": "https://rseng.github.io/software/repository/github/keck-datareductionpipelines/MosfireDRP", "api_url": "https://rseng.github.io/software/api/repos/github/keck-datareductionpipelines/MosfireDRP"}, {"uid": "github/panoptes/POCS", "html_url": "https://rseng.github.io/software/repository/github/panoptes/POCS", "api_url": "https://rseng.github.io/software/api/repos/github/panoptes/POCS"}, {"uid": "github/GBLille/MassiveFold", "html_url": "https://rseng.github.io/software/repository/github/GBLille/MassiveFold", "api_url": "https://rseng.github.io/software/api/repos/github/GBLille/MassiveFold"}, {"uid": "github/ZhenjiangFan/DAG-deepVASE", "html_url": "https://rseng.github.io/software/repository/github/ZhenjiangFan/DAG-deepVASE", "api_url": "https://rseng.github.io/software/api/repos/github/ZhenjiangFan/DAG-deepVASE"}, {"uid": "github/LINNAE-project/SFB-Annotator", "html_url": "https://rseng.github.io/software/repository/github/LINNAE-project/SFB-Annotator", "api_url": "https://rseng.github.io/software/api/repos/github/LINNAE-project/SFB-Annotator"}, {"uid": "github/bsafdi/stellarWakes", "html_url": "https://rseng.github.io/software/repository/github/bsafdi/stellarWakes", "api_url": "https://rseng.github.io/software/api/repos/github/bsafdi/stellarWakes"}, {"uid": "github/HEML/HEML", "html_url": "https://rseng.github.io/software/repository/github/HEML/HEML", "api_url": "https://rseng.github.io/software/api/repos/github/HEML/HEML"}, {"uid": "github/bwvdnbro/HydroCode1D", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/HydroCode1D", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/HydroCode1D"}, {"uid": "github/bwvdnbro/CMacIonize", "html_url": "https://rseng.github.io/software/repository/github/bwvdnbro/CMacIonize", "api_url": "https://rseng.github.io/software/api/repos/github/bwvdnbro/CMacIonize"}, {"uid": "github/iontorrent/TS", "html_url": "https://rseng.github.io/software/repository/github/iontorrent/TS", "api_url": "https://rseng.github.io/software/api/repos/github/iontorrent/TS"}, {"uid": "github/mantzaris/LMDiskANN.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/LMDiskANN.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/LMDiskANN.jl"}, {"uid": "github/mantzaris/BenchmarkDataNLP.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/BenchmarkDataNLP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/BenchmarkDataNLP.jl"}, {"uid": "github/mantzaris/WunDeeDB.jl", "html_url": "https://rseng.github.io/software/repository/github/mantzaris/WunDeeDB.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mantzaris/WunDeeDB.jl"}, {"uid": "github/fkoehlin/montepython_2cosmos_public", "html_url": "https://rseng.github.io/software/repository/github/fkoehlin/montepython_2cosmos_public", "api_url": "https://rseng.github.io/software/api/repos/github/fkoehlin/montepython_2cosmos_public"}, {"uid": "github/cvs-health/langfair", "html_url": "https://rseng.github.io/software/repository/github/cvs-health/langfair", "api_url": "https://rseng.github.io/software/api/repos/github/cvs-health/langfair"}, {"uid": "github/sisl/PyroRL", "html_url": "https://rseng.github.io/software/repository/github/sisl/PyroRL", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/PyroRL"}, {"uid": "github/sisl/ExpFamilyPCA.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/ExpFamilyPCA.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/ExpFamilyPCA.jl"}, {"uid": "github/sisl/POMDPStressTesting.jl", "html_url": "https://rseng.github.io/software/repository/github/sisl/POMDPStressTesting.jl", "api_url": "https://rseng.github.io/software/api/repos/github/sisl/POMDPStressTesting.jl"}, {"uid": "github/signalling-games-org/evoke", "html_url": "https://rseng.github.io/software/repository/github/signalling-games-org/evoke", "api_url": "https://rseng.github.io/software/api/repos/github/signalling-games-org/evoke"}, {"uid": "github/trinityrnaseq/wiki", "html_url": "https://rseng.github.io/software/repository/github/trinityrnaseq/wiki", "api_url": "https://rseng.github.io/software/api/repos/github/trinityrnaseq/wiki"}, {"uid": "github/anddssan/CLOUDe", "html_url": "https://rseng.github.io/software/repository/github/anddssan/CLOUDe", "api_url": "https://rseng.github.io/software/api/repos/github/anddssan/CLOUDe"}, {"uid": "github/VirtualPlantLab/PlantSimEngine.jl", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlantLab/PlantSimEngine.jl"}, {"uid": "github/xxsds/DYNAMIC", "html_url": "https://rseng.github.io/software/repository/github/xxsds/DYNAMIC", "api_url": "https://rseng.github.io/software/api/repos/github/xxsds/DYNAMIC"}, {"uid": "github/etiennepayet/nti", "html_url": "https://rseng.github.io/software/repository/github/etiennepayet/nti", "api_url": "https://rseng.github.io/software/api/repos/github/etiennepayet/nti"}, {"uid": "github/philip-long/robot_collision_checking", "html_url": "https://rseng.github.io/software/repository/github/philip-long/robot_collision_checking", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/robot_collision_checking"}, {"uid": "github/philip-long/constrained_manipulability", "html_url": "https://rseng.github.io/software/repository/github/philip-long/constrained_manipulability", "api_url": "https://rseng.github.io/software/api/repos/github/philip-long/constrained_manipulability"}, {"uid": "github/parallelwindfarms/byteparsing", "html_url": "https://rseng.github.io/software/repository/github/parallelwindfarms/byteparsing", "api_url": "https://rseng.github.io/software/api/repos/github/parallelwindfarms/byteparsing"}, {"uid": "github/kuanrongchan/COVID19-severity", "html_url": "https://rseng.github.io/software/repository/github/kuanrongchan/COVID19-severity", "api_url": "https://rseng.github.io/software/api/repos/github/kuanrongchan/COVID19-severity"}, {"uid": "github/equib/equib", "html_url": "https://rseng.github.io/software/repository/github/equib/equib", "api_url": "https://rseng.github.io/software/api/repos/github/equib/equib"}, {"uid": "github/equib/pyEQUIB", "html_url": "https://rseng.github.io/software/repository/github/equib/pyEQUIB", "api_url": "https://rseng.github.io/software/api/repos/github/equib/pyEQUIB"}, {"uid": "github/exoplanet-dev/exoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/exoplanet"}, {"uid": "github/exoplanet-dev/celerite2", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/celerite2", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/celerite2"}, {"uid": "github/exoplanet-dev/jaxoplanet", "html_url": "https://rseng.github.io/software/repository/github/exoplanet-dev/jaxoplanet", "api_url": "https://rseng.github.io/software/api/repos/github/exoplanet-dev/jaxoplanet"}, {"uid": "github/kartheikiyer/dense_basis", "html_url": "https://rseng.github.io/software/repository/github/kartheikiyer/dense_basis", "api_url": "https://rseng.github.io/software/api/repos/github/kartheikiyer/dense_basis"}, {"uid": "github/hdeeg/KvW", "html_url": "https://rseng.github.io/software/repository/github/hdeeg/KvW", "api_url": "https://rseng.github.io/software/api/repos/github/hdeeg/KvW"}, {"uid": "github/christophmschaefer/miluphcuda", "html_url": "https://rseng.github.io/software/repository/github/christophmschaefer/miluphcuda", "api_url": "https://rseng.github.io/software/api/repos/github/christophmschaefer/miluphcuda"}, {"uid": "github/fpavogt/fcmaker", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/fcmaker", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/fcmaker"}, {"uid": "github/fpavogt/E0102-VR", "html_url": "https://rseng.github.io/software/repository/github/fpavogt/E0102-VR", "api_url": "https://rseng.github.io/software/api/repos/github/fpavogt/E0102-VR"}, {"uid": "github/swiss-seismological-service/DUGseis", "html_url": "https://rseng.github.io/software/repository/github/swiss-seismological-service/DUGseis", "api_url": "https://rseng.github.io/software/api/repos/github/swiss-seismological-service/DUGseis"}, {"uid": "github/Griffan/VerifyBamID", "html_url": "https://rseng.github.io/software/repository/github/Griffan/VerifyBamID", "api_url": "https://rseng.github.io/software/api/repos/github/Griffan/VerifyBamID"}, {"uid": "github/samaygarg/fuelcell", "html_url": "https://rseng.github.io/software/repository/github/samaygarg/fuelcell", "api_url": "https://rseng.github.io/software/api/repos/github/samaygarg/fuelcell"}, {"uid": "github/kkjawz/coref-ee", "html_url": "https://rseng.github.io/software/repository/github/kkjawz/coref-ee", "api_url": "https://rseng.github.io/software/api/repos/github/kkjawz/coref-ee"}, {"uid": "github/jveitchmichaelis/pygadgetreader", "html_url": "https://rseng.github.io/software/repository/github/jveitchmichaelis/pygadgetreader", "api_url": "https://rseng.github.io/software/api/repos/github/jveitchmichaelis/pygadgetreader"}, {"uid": "github/lwang-astro/PeTar", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/PeTar", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/PeTar"}, {"uid": "github/lwang-astro/SDAR", "html_url": "https://rseng.github.io/software/repository/github/lwang-astro/SDAR", "api_url": "https://rseng.github.io/software/api/repos/github/lwang-astro/SDAR"}, {"uid": "github/PDB-REDO/dssp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/dssp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/dssp"}, {"uid": "github/PDB-REDO/cif-tools", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/cif-tools", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/cif-tools"}, {"uid": "github/PDB-REDO/libpdb-redo", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libpdb-redo", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libpdb-redo"}, {"uid": "github/PDB-REDO/libcifpp", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/libcifpp", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/libcifpp"}, {"uid": "github/PDB-REDO/density-fitness", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/density-fitness", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/density-fitness"}, {"uid": "github/PDB-REDO/tortoize", "html_url": "https://rseng.github.io/software/repository/github/PDB-REDO/tortoize", "api_url": "https://rseng.github.io/software/api/repos/github/PDB-REDO/tortoize"}, {"uid": "github/labcbb/SqueezeCall", "html_url": "https://rseng.github.io/software/repository/github/labcbb/SqueezeCall", "api_url": "https://rseng.github.io/software/api/repos/github/labcbb/SqueezeCall"}, {"uid": "github/Kingsford-Group/scallop", "html_url": "https://rseng.github.io/software/repository/github/Kingsford-Group/scallop", "api_url": "https://rseng.github.io/software/api/repos/github/Kingsford-Group/scallop"}, {"uid": "github/lmwalkowicz/Cheetah", "html_url": "https://rseng.github.io/software/repository/github/lmwalkowicz/Cheetah", "api_url": "https://rseng.github.io/software/api/repos/github/lmwalkowicz/Cheetah"}, {"uid": "github/FDPS/FDPS", "html_url": "https://rseng.github.io/software/repository/github/FDPS/FDPS", "api_url": "https://rseng.github.io/software/api/repos/github/FDPS/FDPS"}, {"uid": "github/cmayer/BaitFisher-package", "html_url": "https://rseng.github.io/software/repository/github/cmayer/BaitFisher-package", "api_url": "https://rseng.github.io/software/api/repos/github/cmayer/BaitFisher-package"}, {"uid": "github/susiegriggo/Phynteny_transformer", "html_url": "https://rseng.github.io/software/repository/github/susiegriggo/Phynteny_transformer", "api_url": "https://rseng.github.io/software/api/repos/github/susiegriggo/Phynteny_transformer"}, {"uid": "github/oneilsh/tidytensor", "html_url": "https://rseng.github.io/software/repository/github/oneilsh/tidytensor", "api_url": "https://rseng.github.io/software/api/repos/github/oneilsh/tidytensor"}, {"uid": "github/sblunt/orbitize", "html_url": "https://rseng.github.io/software/repository/github/sblunt/orbitize", "api_url": "https://rseng.github.io/software/api/repos/github/sblunt/orbitize"}, {"uid": "github/leesulab/arcMS", "html_url": "https://rseng.github.io/software/repository/github/leesulab/arcMS", "api_url": "https://rseng.github.io/software/api/repos/github/leesulab/arcMS"}, {"uid": "github/Toloka/crowd-kit", "html_url": "https://rseng.github.io/software/repository/github/Toloka/crowd-kit", "api_url": "https://rseng.github.io/software/api/repos/github/Toloka/crowd-kit"}, {"uid": "github/ClaudioZandonella/PRDA", "html_url": "https://rseng.github.io/software/repository/github/ClaudioZandonella/PRDA", "api_url": "https://rseng.github.io/software/api/repos/github/ClaudioZandonella/PRDA"}, {"uid": "github/sevimcengiz/Oryx-MRSI", "html_url": "https://rseng.github.io/software/repository/github/sevimcengiz/Oryx-MRSI", "api_url": "https://rseng.github.io/software/api/repos/github/sevimcengiz/Oryx-MRSI"}, {"uid": "github/scrm/scrmhub.io", "html_url": "https://rseng.github.io/software/repository/github/scrm/scrmhub.io", "api_url": "https://rseng.github.io/software/api/repos/github/scrm/scrmhub.io"}, {"uid": "github/MrShoenel/metrics-as-scores", "html_url": "https://rseng.github.io/software/repository/github/MrShoenel/metrics-as-scores", "api_url": "https://rseng.github.io/software/api/repos/github/MrShoenel/metrics-as-scores"}, {"uid": "github/sdrastro/NWelch", "html_url": "https://rseng.github.io/software/repository/github/sdrastro/NWelch", "api_url": "https://rseng.github.io/software/api/repos/github/sdrastro/NWelch"}, {"uid": "github/project-asgard/asgard", "html_url": "https://rseng.github.io/software/repository/github/project-asgard/asgard", "api_url": "https://rseng.github.io/software/api/repos/github/project-asgard/asgard"}, {"uid": "github/minaskar/zeus", "html_url": "https://rseng.github.io/software/repository/github/minaskar/zeus", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/zeus"}, {"uid": "github/minaskar/hankl", "html_url": "https://rseng.github.io/software/repository/github/minaskar/hankl", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/hankl"}, {"uid": "github/minaskar/pocomc", "html_url": "https://rseng.github.io/software/repository/github/minaskar/pocomc", "api_url": "https://rseng.github.io/software/api/repos/github/minaskar/pocomc"}, {"uid": "github/lczech/gappa", "html_url": "https://rseng.github.io/software/repository/github/lczech/gappa", "api_url": "https://rseng.github.io/software/api/repos/github/lczech/gappa"}, {"uid": "github/pedronachtigall/ToxCodAn-Genome", "html_url": "https://rseng.github.io/software/repository/github/pedronachtigall/ToxCodAn-Genome", "api_url": "https://rseng.github.io/software/api/repos/github/pedronachtigall/ToxCodAn-Genome"}, {"uid": "github/braindatalab/PyBispectra", "html_url": "https://rseng.github.io/software/repository/github/braindatalab/PyBispectra", "api_url": "https://rseng.github.io/software/api/repos/github/braindatalab/PyBispectra"}, {"uid": "github/daeken/Emokit", "html_url": "https://rseng.github.io/software/repository/github/daeken/Emokit", "api_url": "https://rseng.github.io/software/api/repos/github/daeken/Emokit"}, {"uid": "github/fair-data/fairdatapoint-client", "html_url": "https://rseng.github.io/software/repository/github/fair-data/fairdatapoint-client", "api_url": "https://rseng.github.io/software/api/repos/github/fair-data/fairdatapoint-client"}, {"uid": "github/undark-lab/albatross", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/albatross", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/albatross"}, {"uid": "github/undark-lab/swyft", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/swyft", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/swyft"}, {"uid": "github/undark-lab/sstrax", "html_url": "https://rseng.github.io/software/repository/github/undark-lab/sstrax", "api_url": "https://rseng.github.io/software/api/repos/github/undark-lab/sstrax"}, {"uid": "github/florisvb/PyNumDiff", "html_url": "https://rseng.github.io/software/repository/github/florisvb/PyNumDiff", "api_url": "https://rseng.github.io/software/api/repos/github/florisvb/PyNumDiff"}, {"uid": "github/parkus/scicatalog", "html_url": "https://rseng.github.io/software/repository/github/parkus/scicatalog", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/scicatalog"}, {"uid": "github/parkus/ffd", "html_url": "https://rseng.github.io/software/repository/github/parkus/ffd", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/ffd"}, {"uid": "github/parkus/fiducial_flare", "html_url": "https://rseng.github.io/software/repository/github/parkus/fiducial_flare", "api_url": "https://rseng.github.io/software/api/repos/github/parkus/fiducial_flare"}, {"uid": "github/Aminsinichi/wearable-hrv", "html_url": "https://rseng.github.io/software/repository/github/Aminsinichi/wearable-hrv", "api_url": "https://rseng.github.io/software/api/repos/github/Aminsinichi/wearable-hrv"}, {"uid": "github/MCTwo/MCMAC", "html_url": "https://rseng.github.io/software/repository/github/MCTwo/MCMAC", "api_url": "https://rseng.github.io/software/api/repos/github/MCTwo/MCMAC"}, {"uid": "github/isce-framework/dolphin", "html_url": "https://rseng.github.io/software/repository/github/isce-framework/dolphin", "api_url": "https://rseng.github.io/software/api/repos/github/isce-framework/dolphin"}, {"uid": "github/galtay/sphray", "html_url": "https://rseng.github.io/software/repository/github/galtay/sphray", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/sphray"}, {"uid": "github/galtay/urchin", "html_url": "https://rseng.github.io/software/repository/github/galtay/urchin", "api_url": "https://rseng.github.io/software/api/repos/github/galtay/urchin"}, {"uid": "github/FlowModelingControl/flowtorch", "html_url": "https://rseng.github.io/software/repository/github/FlowModelingControl/flowtorch", "api_url": "https://rseng.github.io/software/api/repos/github/FlowModelingControl/flowtorch"}, {"uid": "github/BenWibking/quokka", "html_url": "https://rseng.github.io/software/repository/github/BenWibking/quokka", "api_url": "https://rseng.github.io/software/api/repos/github/BenWibking/quokka"}, {"uid": "github/flexible-atomic-code/fac", "html_url": "https://rseng.github.io/software/repository/github/flexible-atomic-code/fac", "api_url": "https://rseng.github.io/software/api/repos/github/flexible-atomic-code/fac"}, {"uid": "github/TravisWheelerLab/VIBES", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/VIBES", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/VIBES"}, {"uid": "github/TravisWheelerLab/NINJA", "html_url": "https://rseng.github.io/software/repository/github/TravisWheelerLab/NINJA", "api_url": "https://rseng.github.io/software/api/repos/github/TravisWheelerLab/NINJA"}, {"uid": "github/BasilioRuiz/SIR-code", "html_url": "https://rseng.github.io/software/repository/github/BasilioRuiz/SIR-code", "api_url": "https://rseng.github.io/software/api/repos/github/BasilioRuiz/SIR-code"}, {"uid": "github/ArgonneCPAC/diffmah", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffmah", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffmah"}, {"uid": "github/ArgonneCPAC/dsps", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/dsps", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/dsps"}, {"uid": "github/ArgonneCPAC/diffstar", "html_url": "https://rseng.github.io/software/repository/github/ArgonneCPAC/diffstar", "api_url": "https://rseng.github.io/software/api/repos/github/ArgonneCPAC/diffstar"}, {"uid": "github/bbuchfink/diamond", "html_url": "https://rseng.github.io/software/repository/github/bbuchfink/diamond", "api_url": "https://rseng.github.io/software/api/repos/github/bbuchfink/diamond"}, {"uid": "github/goshng/polap", "html_url": "https://rseng.github.io/software/repository/github/goshng/polap", "api_url": "https://rseng.github.io/software/api/repos/github/goshng/polap"}, {"uid": "github/tomalf2/recombinhunt-cov", "html_url": "https://rseng.github.io/software/repository/github/tomalf2/recombinhunt-cov", "api_url": "https://rseng.github.io/software/api/repos/github/tomalf2/recombinhunt-cov"}, {"uid": "github/bwinkel/cygrid", "html_url": "https://rseng.github.io/software/repository/github/bwinkel/cygrid", "api_url": "https://rseng.github.io/software/api/repos/github/bwinkel/cygrid"}, {"uid": "github/PimenoffV/biotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/biotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/biotic"}, {"uid": "github/PimenoffV/Abiotic", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/Abiotic", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/Abiotic"}, {"uid": "github/PimenoffV/VIBE", "html_url": "https://rseng.github.io/software/repository/github/PimenoffV/VIBE", "api_url": "https://rseng.github.io/software/api/repos/github/PimenoffV/VIBE"}, {"uid": "github/caseyjlaw/tpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/tpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/tpipe"}, {"uid": "github/caseyjlaw/rtpipe", "html_url": "https://rseng.github.io/software/repository/github/caseyjlaw/rtpipe", "api_url": "https://rseng.github.io/software/api/repos/github/caseyjlaw/rtpipe"}, {"uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", "html_url": "https://rseng.github.io/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", "api_url": "https://rseng.github.io/software/api/repos/github/FSEC-Photovoltaics/pvrpm-lcoe"}, {"uid": "github/DingshanDeng/ysoisochrone", "html_url": "https://rseng.github.io/software/repository/github/DingshanDeng/ysoisochrone", "api_url": "https://rseng.github.io/software/api/repos/github/DingshanDeng/ysoisochrone"}, {"uid": "github/tekpinar/correlationplus", "html_url": "https://rseng.github.io/software/repository/github/tekpinar/correlationplus", "api_url": "https://rseng.github.io/software/api/repos/github/tekpinar/correlationplus"}, {"uid": "github/ChengF-Lab/AOPEDF", "html_url": "https://rseng.github.io/software/repository/github/ChengF-Lab/AOPEDF", "api_url": "https://rseng.github.io/software/api/repos/github/ChengF-Lab/AOPEDF"}, {"uid": "github/iraf-community/pyraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/pyraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/pyraf"}, {"uid": "github/iraf-community/iraf", "html_url": "https://rseng.github.io/software/repository/github/iraf-community/iraf", "api_url": "https://rseng.github.io/software/api/repos/github/iraf-community/iraf"}, {"uid": "github/fkeruzore/halox", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/halox", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/halox"}, {"uid": "github/fkeruzore/picasso", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/picasso", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/picasso"}, {"uid": "github/fkeruzore/panco2", "html_url": "https://rseng.github.io/software/repository/github/fkeruzore/panco2", "api_url": "https://rseng.github.io/software/api/repos/github/fkeruzore/panco2"}, {"uid": "github/gmzsebastian/FLEET", "html_url": "https://rseng.github.io/software/repository/github/gmzsebastian/FLEET", "api_url": "https://rseng.github.io/software/api/repos/github/gmzsebastian/FLEET"}, {"uid": "github/tudelft3d/3dfier", "html_url": "https://rseng.github.io/software/repository/github/tudelft3d/3dfier", "api_url": "https://rseng.github.io/software/api/repos/github/tudelft3d/3dfier"}, {"uid": "github/loosolab/TOBIAS", "html_url": "https://rseng.github.io/software/repository/github/loosolab/TOBIAS", "api_url": "https://rseng.github.io/software/api/repos/github/loosolab/TOBIAS"}, {"uid": "github/lorenaacuna/GASTLI", "html_url": "https://rseng.github.io/software/repository/github/lorenaacuna/GASTLI", "api_url": "https://rseng.github.io/software/api/repos/github/lorenaacuna/GASTLI"}, {"uid": "github/tlambert03/pycudadecon", "html_url": "https://rseng.github.io/software/repository/github/tlambert03/pycudadecon", "api_url": "https://rseng.github.io/software/api/repos/github/tlambert03/pycudadecon"}, {"uid": "github/fkiwy/Finder_charts", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/Finder_charts", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/Finder_charts"}, {"uid": "github/fkiwy/unTimely_Catalog_explorer", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/unTimely_Catalog_explorer", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/unTimely_Catalog_explorer"}, {"uid": "github/fkiwy/AstroToolBox", "html_url": "https://rseng.github.io/software/repository/github/fkiwy/AstroToolBox", "api_url": "https://rseng.github.io/software/api/repos/github/fkiwy/AstroToolBox"}, {"uid": "github/cjbarrie/academictwitteR", "html_url": "https://rseng.github.io/software/repository/github/cjbarrie/academictwitteR", "api_url": "https://rseng.github.io/software/api/repos/github/cjbarrie/academictwitteR"}, {"uid": "github/ilaudy/PIAO", "html_url": "https://rseng.github.io/software/repository/github/ilaudy/PIAO", "api_url": "https://rseng.github.io/software/api/repos/github/ilaudy/PIAO"}, {"uid": "github/ArnaudCassan/microlensing", "html_url": "https://rseng.github.io/software/repository/github/ArnaudCassan/microlensing", "api_url": "https://rseng.github.io/software/api/repos/github/ArnaudCassan/microlensing"}, {"uid": "github/ViennaRNA/RNAblueprint", "html_url": "https://rseng.github.io/software/repository/github/ViennaRNA/RNAblueprint", "api_url": "https://rseng.github.io/software/api/repos/github/ViennaRNA/RNAblueprint"}, {"uid": "github/a-griffiths/AutoSpec", "html_url": "https://rseng.github.io/software/repository/github/a-griffiths/AutoSpec", "api_url": "https://rseng.github.io/software/api/repos/github/a-griffiths/AutoSpec"}, {"uid": "github/matchms/ms2deepscore", "html_url": "https://rseng.github.io/software/repository/github/matchms/ms2deepscore", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/ms2deepscore"}, {"uid": "github/matchms/matchms", "html_url": "https://rseng.github.io/software/repository/github/matchms/matchms", "api_url": "https://rseng.github.io/software/api/repos/github/matchms/matchms"}, {"uid": "github/chrisfinlay/tabascal", "html_url": "https://rseng.github.io/software/repository/github/chrisfinlay/tabascal", "api_url": "https://rseng.github.io/software/api/repos/github/chrisfinlay/tabascal"}, {"uid": "github/1054/Crab.Toolkit.michi2", "html_url": "https://rseng.github.io/software/repository/github/1054/Crab.Toolkit.michi2", "api_url": "https://rseng.github.io/software/api/repos/github/1054/Crab.Toolkit.michi2"}, {"uid": "github/3fon3fonov/exostriker", "html_url": "https://rseng.github.io/software/repository/github/3fon3fonov/exostriker", "api_url": "https://rseng.github.io/software/api/repos/github/3fon3fonov/exostriker"}, {"uid": "github/firefly-cpp/NiaARM", "html_url": "https://rseng.github.io/software/repository/github/firefly-cpp/NiaARM", "api_url": "https://rseng.github.io/software/api/repos/github/firefly-cpp/NiaARM"}, {"uid": "github/quanted/esat", "html_url": "https://rseng.github.io/software/repository/github/quanted/esat", "api_url": "https://rseng.github.io/software/api/repos/github/quanted/esat"}, {"uid": "github/LiyrAstroph/RECON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/RECON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/RECON"}, {"uid": "github/LiyrAstroph/BRAINS", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/BRAINS", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/BRAINS"}, {"uid": "github/LiyrAstroph/PyCALI", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PyCALI", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PyCALI"}, {"uid": "github/LiyrAstroph/PIXON", "html_url": "https://rseng.github.io/software/repository/github/LiyrAstroph/PIXON", "api_url": "https://rseng.github.io/software/api/repos/github/LiyrAstroph/PIXON"}, {"uid": "github/AstroChem/VISIBLE", "html_url": "https://rseng.github.io/software/repository/github/AstroChem/VISIBLE", "api_url": "https://rseng.github.io/software/api/repos/github/AstroChem/VISIBLE"}, {"uid": "github/aslan-ng/keepdelta", "html_url": "https://rseng.github.io/software/repository/github/aslan-ng/keepdelta", "api_url": "https://rseng.github.io/software/api/repos/github/aslan-ng/keepdelta"}, {"uid": "github/bge-barcoding/gene_fetch", "html_url": "https://rseng.github.io/software/repository/github/bge-barcoding/gene_fetch", "api_url": "https://rseng.github.io/software/api/repos/github/bge-barcoding/gene_fetch"}, {"uid": "github/aiidateam/kiwipy", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/kiwipy", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/kiwipy"}, {"uid": "github/aiidateam/aiida-core", "html_url": "https://rseng.github.io/software/repository/github/aiidateam/aiida-core", "api_url": "https://rseng.github.io/software/api/repos/github/aiidateam/aiida-core"}, {"uid": "github/cmbant/getdist", "html_url": "https://rseng.github.io/software/repository/github/cmbant/getdist", "api_url": "https://rseng.github.io/software/api/repos/github/cmbant/getdist"}, {"uid": "github/EBI-Metagenomics/EukCC", "html_url": "https://rseng.github.io/software/repository/github/EBI-Metagenomics/EukCC", "api_url": "https://rseng.github.io/software/api/repos/github/EBI-Metagenomics/EukCC"}, {"uid": "github/RangamaniLabUCSD/smart", "html_url": "https://rseng.github.io/software/repository/github/RangamaniLabUCSD/smart", "api_url": "https://rseng.github.io/software/api/repos/github/RangamaniLabUCSD/smart"}, {"uid": "github/IFB-ElixirFr/edam-browser", "html_url": "https://rseng.github.io/software/repository/github/IFB-ElixirFr/edam-browser", "api_url": "https://rseng.github.io/software/api/repos/github/IFB-ElixirFr/edam-browser"}, {"uid": "github/shengjin/nii-c", "html_url": "https://rseng.github.io/software/repository/github/shengjin/nii-c", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/nii-c"}, {"uid": "github/shengjin/Nii", "html_url": "https://rseng.github.io/software/repository/github/shengjin/Nii", "api_url": "https://rseng.github.io/software/api/repos/github/shengjin/Nii"}, {"uid": "github/ntlucia/BrownDwarf-SpectralIndices", "html_url": "https://rseng.github.io/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", "api_url": "https://rseng.github.io/software/api/repos/github/ntlucia/BrownDwarf-SpectralIndices"}, {"uid": "github/chapmanb/bcbio.variation", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.variation", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.variation"}, {"uid": "github/chapmanb/bcbio.prioritize", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbio.prioritize", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbio.prioritize"}, {"uid": "github/chapmanb/bcbb", "html_url": "https://rseng.github.io/software/repository/github/chapmanb/bcbb", "api_url": "https://rseng.github.io/software/api/repos/github/chapmanb/bcbb"}, {"uid": "github/MesserLab/SLiM", "html_url": "https://rseng.github.io/software/repository/github/MesserLab/SLiM", "api_url": "https://rseng.github.io/software/api/repos/github/MesserLab/SLiM"}, {"uid": "github/lsncibb/microbiomeGWAS", "html_url": "https://rseng.github.io/software/repository/github/lsncibb/microbiomeGWAS", "api_url": "https://rseng.github.io/software/api/repos/github/lsncibb/microbiomeGWAS"}, {"uid": "github/mikhailklassen/protostellar_evolution", "html_url": "https://rseng.github.io/software/repository/github/mikhailklassen/protostellar_evolution", "api_url": "https://rseng.github.io/software/api/repos/github/mikhailklassen/protostellar_evolution"}, {"uid": "github/hetalang/heta-compiler", "html_url": "https://rseng.github.io/software/repository/github/hetalang/heta-compiler", "api_url": "https://rseng.github.io/software/api/repos/github/hetalang/heta-compiler"}, {"uid": "github/RealTimeGenomics/rtg-tools", "html_url": "https://rseng.github.io/software/repository/github/RealTimeGenomics/rtg-tools", "api_url": "https://rseng.github.io/software/api/repos/github/RealTimeGenomics/rtg-tools"}, {"uid": "github/INCEPTdk/adaptr", "html_url": "https://rseng.github.io/software/repository/github/INCEPTdk/adaptr", "api_url": "https://rseng.github.io/software/api/repos/github/INCEPTdk/adaptr"}, {"uid": "github/astrocaroline/opacity-wizard", "html_url": "https://rseng.github.io/software/repository/github/astrocaroline/opacity-wizard", "api_url": "https://rseng.github.io/software/api/repos/github/astrocaroline/opacity-wizard"}, {"uid": "github/cmzmasek/forester", "html_url": "https://rseng.github.io/software/repository/github/cmzmasek/forester", "api_url": "https://rseng.github.io/software/api/repos/github/cmzmasek/forester"}, {"uid": "github/parklab/SCAN2", "html_url": "https://rseng.github.io/software/repository/github/parklab/SCAN2", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/SCAN2"}, {"uid": "github/parklab/LiRA", "html_url": "https://rseng.github.io/software/repository/github/parklab/LiRA", "api_url": "https://rseng.github.io/software/api/repos/github/parklab/LiRA"}, {"uid": "github/rauschenberger/transreg", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/transreg", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/transreg"}, {"uid": "github/rauschenberger/joinet", "html_url": "https://rseng.github.io/software/repository/github/rauschenberger/joinet", "api_url": "https://rseng.github.io/software/api/repos/github/rauschenberger/joinet"}, {"uid": "github/sievers/corrcal", "html_url": "https://rseng.github.io/software/repository/github/sievers/corrcal", "api_url": "https://rseng.github.io/software/api/repos/github/sievers/corrcal"}, {"uid": "github/lahovniktadej/gatree", "html_url": "https://rseng.github.io/software/repository/github/lahovniktadej/gatree", "api_url": "https://rseng.github.io/software/api/repos/github/lahovniktadej/gatree"}, {"uid": "github/PMBio/spatialde2-paper", "html_url": "https://rseng.github.io/software/repository/github/PMBio/spatialde2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/spatialde2-paper"}, {"uid": "github/PMBio/peer", "html_url": "https://rseng.github.io/software/repository/github/PMBio/peer", "api_url": "https://rseng.github.io/software/api/repos/github/PMBio/peer"}, {"uid": "github/qMRLab/qMRLab", "html_url": "https://rseng.github.io/software/repository/github/qMRLab/qMRLab", "api_url": "https://rseng.github.io/software/api/repos/github/qMRLab/qMRLab"}, {"uid": "github/TimothyADavis/KinMSpy", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/KinMSpy", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/KinMSpy"}, {"uid": "github/TimothyADavis/GAStimator", "html_url": "https://rseng.github.io/software/repository/github/TimothyADavis/GAStimator", "api_url": "https://rseng.github.io/software/api/repos/github/TimothyADavis/GAStimator"}, {"uid": "github/ucberkeleyseti/turbo_seti", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/turbo_seti", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/turbo_seti"}, {"uid": "github/ucberkeleyseti/blimpy", "html_url": "https://rseng.github.io/software/repository/github/ucberkeleyseti/blimpy", "api_url": "https://rseng.github.io/software/api/repos/github/ucberkeleyseti/blimpy"}, {"uid": "github/sibirrer/hierArc", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/hierArc", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/hierArc"}, {"uid": "github/sibirrer/lenstronomy", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/lenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/lenstronomy"}, {"uid": "github/sibirrer/psfr", "html_url": "https://rseng.github.io/software/repository/github/sibirrer/psfr", "api_url": "https://rseng.github.io/software/api/repos/github/sibirrer/psfr"}, {"uid": "github/joglekara/VlaPy", "html_url": "https://rseng.github.io/software/repository/github/joglekara/VlaPy", "api_url": "https://rseng.github.io/software/api/repos/github/joglekara/VlaPy"}, {"uid": "github/ccsosa/GOCompare", "html_url": "https://rseng.github.io/software/repository/github/ccsosa/GOCompare", "api_url": "https://rseng.github.io/software/api/repos/github/ccsosa/GOCompare"}, {"uid": "github/ctkelley/MultiPrecisionArrays.jl", "html_url": "https://rseng.github.io/software/repository/github/ctkelley/MultiPrecisionArrays.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ctkelley/MultiPrecisionArrays.jl"}, {"uid": "github/nhhaidee/WaveSeekerNet", "html_url": "https://rseng.github.io/software/repository/github/nhhaidee/WaveSeekerNet", "api_url": "https://rseng.github.io/software/api/repos/github/nhhaidee/WaveSeekerNet"}, {"uid": "github/juliotux/astropop", "html_url": "https://rseng.github.io/software/repository/github/juliotux/astropop", "api_url": "https://rseng.github.io/software/api/repos/github/juliotux/astropop"}, {"uid": "github/rmpiro/decompTumor2Sig", "html_url": "https://rseng.github.io/software/repository/github/rmpiro/decompTumor2Sig", "api_url": "https://rseng.github.io/software/api/repos/github/rmpiro/decompTumor2Sig"}, {"uid": "github/HUST-NingKang-Lab/ONN4MST", "html_url": "https://rseng.github.io/software/repository/github/HUST-NingKang-Lab/ONN4MST", "api_url": "https://rseng.github.io/software/api/repos/github/HUST-NingKang-Lab/ONN4MST"}, {"uid": "github/rvalieris/parallel-fastq-dump", "html_url": "https://rseng.github.io/software/repository/github/rvalieris/parallel-fastq-dump", "api_url": "https://rseng.github.io/software/api/repos/github/rvalieris/parallel-fastq-dump"}, {"uid": "github/rahulshah1397/LADDER", "html_url": "https://rseng.github.io/software/repository/github/rahulshah1397/LADDER", "api_url": "https://rseng.github.io/software/api/repos/github/rahulshah1397/LADDER"}, {"uid": "github/PieterjanRobbe/GaussianRandomFields.jl", "html_url": "https://rseng.github.io/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", "api_url": "https://rseng.github.io/software/api/repos/github/PieterjanRobbe/GaussianRandomFields.jl"}, {"uid": "github/BMILAB/scLINE", "html_url": "https://rseng.github.io/software/repository/github/BMILAB/scLINE", "api_url": "https://rseng.github.io/software/api/repos/github/BMILAB/scLINE"}, {"uid": "github/DataBiosphere/wdl-parsers", "html_url": "https://rseng.github.io/software/repository/github/DataBiosphere/wdl-parsers", "api_url": "https://rseng.github.io/software/api/repos/github/DataBiosphere/wdl-parsers"}, {"uid": "github/nla-group/fABBA", "html_url": "https://rseng.github.io/software/repository/github/nla-group/fABBA", "api_url": "https://rseng.github.io/software/api/repos/github/nla-group/fABBA"}, {"uid": "github/CMU-SAFARI/BLEND", "html_url": "https://rseng.github.io/software/repository/github/CMU-SAFARI/BLEND", "api_url": "https://rseng.github.io/software/api/repos/github/CMU-SAFARI/BLEND"}, {"uid": "github/abatten/fruitbat", "html_url": "https://rseng.github.io/software/repository/github/abatten/fruitbat", "api_url": "https://rseng.github.io/software/api/repos/github/abatten/fruitbat"}, {"uid": "github/Hegghammer/daiR", "html_url": "https://rseng.github.io/software/repository/github/Hegghammer/daiR", "api_url": "https://rseng.github.io/software/api/repos/github/Hegghammer/daiR"}, {"uid": "github/BirkhoffG/jax-relax", "html_url": "https://rseng.github.io/software/repository/github/BirkhoffG/jax-relax", "api_url": "https://rseng.github.io/software/api/repos/github/BirkhoffG/jax-relax"}, {"uid": "github/biolab-unige/nifti2dicom", "html_url": "https://rseng.github.io/software/repository/github/biolab-unige/nifti2dicom", "api_url": "https://rseng.github.io/software/api/repos/github/biolab-unige/nifti2dicom"}, {"uid": "github/Crick-CancerGenomics/ascat", "html_url": "https://rseng.github.io/software/repository/github/Crick-CancerGenomics/ascat", "api_url": "https://rseng.github.io/software/api/repos/github/Crick-CancerGenomics/ascat"}, {"uid": "github/pynbody/genetIC", "html_url": "https://rseng.github.io/software/repository/github/pynbody/genetIC", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/genetIC"}, {"uid": "github/pynbody/pynbody", "html_url": "https://rseng.github.io/software/repository/github/pynbody/pynbody", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/pynbody"}, {"uid": "github/pynbody/tangos", "html_url": "https://rseng.github.io/software/repository/github/pynbody/tangos", "api_url": "https://rseng.github.io/software/api/repos/github/pynbody/tangos"}, {"uid": "github/li-shaochuan/SEDIM", "html_url": "https://rseng.github.io/software/repository/github/li-shaochuan/SEDIM", "api_url": "https://rseng.github.io/software/api/repos/github/li-shaochuan/SEDIM"}, {"uid": "github/hydroframe/hf_hydrodata", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/hf_hydrodata", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/hf_hydrodata"}, {"uid": "github/hydroframe/subsettools", "html_url": "https://rseng.github.io/software/repository/github/hydroframe/subsettools", "api_url": "https://rseng.github.io/software/api/repos/github/hydroframe/subsettools"}, {"uid": "github/SpaceML/GalaxyGAN", "html_url": "https://rseng.github.io/software/repository/github/SpaceML/GalaxyGAN", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceML/GalaxyGAN"}, {"uid": "github/timothydmorton/vespa", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/vespa", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/vespa"}, {"uid": "github/timothydmorton/isochrones", "html_url": "https://rseng.github.io/software/repository/github/timothydmorton/isochrones", "api_url": "https://rseng.github.io/software/api/repos/github/timothydmorton/isochrones"}, {"uid": "github/hippke/pandora", "html_url": "https://rseng.github.io/software/repository/github/hippke/pandora", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pandora"}, {"uid": "github/hippke/wotan", "html_url": "https://rseng.github.io/software/repository/github/hippke/wotan", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/wotan"}, {"uid": "github/hippke/PyOSE", "html_url": "https://rseng.github.io/software/repository/github/hippke/PyOSE", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/PyOSE"}, {"uid": "github/hippke/communication", "html_url": "https://rseng.github.io/software/repository/github/hippke/communication", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/communication"}, {"uid": "github/hippke/pulses", "html_url": "https://rseng.github.io/software/repository/github/hippke/pulses", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/pulses"}, {"uid": "github/hippke/tls", "html_url": "https://rseng.github.io/software/repository/github/hippke/tls", "api_url": "https://rseng.github.io/software/api/repos/github/hippke/tls"}, {"uid": "github/deaglanbartlett/symbolic_pofk", "html_url": "https://rseng.github.io/software/repository/github/deaglanbartlett/symbolic_pofk", "api_url": "https://rseng.github.io/software/api/repos/github/deaglanbartlett/symbolic_pofk"}, {"uid": "github/flatironinstitute/nifty-ls", "html_url": "https://rseng.github.io/software/repository/github/flatironinstitute/nifty-ls", "api_url": "https://rseng.github.io/software/api/repos/github/flatironinstitute/nifty-ls"}, {"uid": "github/FabianPlum/OmniTrax", "html_url": "https://rseng.github.io/software/repository/github/FabianPlum/OmniTrax", "api_url": "https://rseng.github.io/software/api/repos/github/FabianPlum/OmniTrax"}, {"uid": "github/bioinfodlsu/PHIStruct", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/PHIStruct", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/PHIStruct"}, {"uid": "github/bioinfodlsu/phage-host-prediction", "html_url": "https://rseng.github.io/software/repository/github/bioinfodlsu/phage-host-prediction", "api_url": "https://rseng.github.io/software/api/repos/github/bioinfodlsu/phage-host-prediction"}, {"uid": "github/MathynVanD/GraFIT", "html_url": "https://rseng.github.io/software/repository/github/MathynVanD/GraFIT", "api_url": "https://rseng.github.io/software/api/repos/github/MathynVanD/GraFIT"}, {"uid": "github/pyranges/pyrle", "html_url": "https://rseng.github.io/software/repository/github/pyranges/pyrle", "api_url": "https://rseng.github.io/software/api/repos/github/pyranges/pyrle"}, {"uid": "github/PavlidisLab/Gemma", "html_url": "https://rseng.github.io/software/repository/github/PavlidisLab/Gemma", "api_url": "https://rseng.github.io/software/api/repos/github/PavlidisLab/Gemma"}, {"uid": "github/AWehrhahn/SME", "html_url": "https://rseng.github.io/software/repository/github/AWehrhahn/SME", "api_url": "https://rseng.github.io/software/api/repos/github/AWehrhahn/SME"}, {"uid": "github/LCOGT/banzai", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai"}, {"uid": "github/LCOGT/banzai-nres", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/banzai-nres", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/banzai-nres"}, {"uid": "github/LCOGT/neoexchange", "html_url": "https://rseng.github.io/software/repository/github/LCOGT/neoexchange", "api_url": "https://rseng.github.io/software/api/repos/github/LCOGT/neoexchange"}, {"uid": "github/fredstro/hilbertmodgroup", "html_url": "https://rseng.github.io/software/repository/github/fredstro/hilbertmodgroup", "api_url": "https://rseng.github.io/software/api/repos/github/fredstro/hilbertmodgroup"}, {"uid": "github/arabic-digital-humanities/adhtools", "html_url": "https://rseng.github.io/software/repository/github/arabic-digital-humanities/adhtools", "api_url": "https://rseng.github.io/software/api/repos/github/arabic-digital-humanities/adhtools"}, {"uid": "github/mms-fcul/PypKa", "html_url": "https://rseng.github.io/software/repository/github/mms-fcul/PypKa", "api_url": "https://rseng.github.io/software/api/repos/github/mms-fcul/PypKa"}, {"uid": "github/max-little/GRAPL", "html_url": "https://rseng.github.io/software/repository/github/max-little/GRAPL", "api_url": "https://rseng.github.io/software/api/repos/github/max-little/GRAPL"}, {"uid": "github/konradhoeffner/hdt", "html_url": "https://rseng.github.io/software/repository/github/konradhoeffner/hdt", "api_url": "https://rseng.github.io/software/api/repos/github/konradhoeffner/hdt"}, {"uid": "github/xCDAT/xcdat", "html_url": "https://rseng.github.io/software/repository/github/xCDAT/xcdat", "api_url": "https://rseng.github.io/software/api/repos/github/xCDAT/xcdat"}, {"uid": "github/mianbreton/pysco", "html_url": "https://rseng.github.io/software/repository/github/mianbreton/pysco", "api_url": "https://rseng.github.io/software/api/repos/github/mianbreton/pysco"}, {"uid": "github/hotokezaka/HeatingRate", "html_url": "https://rseng.github.io/software/repository/github/hotokezaka/HeatingRate", "api_url": "https://rseng.github.io/software/api/repos/github/hotokezaka/HeatingRate"}, {"uid": "github/julblarod/SOPHISM", "html_url": "https://rseng.github.io/software/repository/github/julblarod/SOPHISM", "api_url": "https://rseng.github.io/software/api/repos/github/julblarod/SOPHISM"}, {"uid": "github/ParkvilleData/MetaGenePipe", "html_url": "https://rseng.github.io/software/repository/github/ParkvilleData/MetaGenePipe", "api_url": "https://rseng.github.io/software/api/repos/github/ParkvilleData/MetaGenePipe"}, {"uid": "github/Adamtaranto/mimeo", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/mimeo", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/mimeo"}, {"uid": "github/Adamtaranto/Yanagiba", "html_url": "https://rseng.github.io/software/repository/github/Adamtaranto/Yanagiba", "api_url": "https://rseng.github.io/software/api/repos/github/Adamtaranto/Yanagiba"}, {"uid": "github/mofanv/darknetz", "html_url": "https://rseng.github.io/software/repository/github/mofanv/darknetz", "api_url": "https://rseng.github.io/software/api/repos/github/mofanv/darknetz"}, {"uid": "github/rajeshmondal18/FoF-Halo-finder", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/FoF-Halo-finder", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/FoF-Halo-finder"}, {"uid": "github/rajeshmondal18/MAPS", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/MAPS", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/MAPS"}, {"uid": "github/rajeshmondal18/N-body", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/N-body", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/N-body"}, {"uid": "github/rajeshmondal18/ReionYuga", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/ReionYuga", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/ReionYuga"}, {"uid": "github/rajeshmondal18/DviSukta", "html_url": "https://rseng.github.io/software/repository/github/rajeshmondal18/DviSukta", "api_url": "https://rseng.github.io/software/api/repos/github/rajeshmondal18/DviSukta"}, {"uid": "github/DariaGangardt/pAGN", "html_url": "https://rseng.github.io/software/repository/github/DariaGangardt/pAGN", "api_url": "https://rseng.github.io/software/api/repos/github/DariaGangardt/pAGN"}, {"uid": "github/SharmaLlama/ticktack", "html_url": "https://rseng.github.io/software/repository/github/SharmaLlama/ticktack", "api_url": "https://rseng.github.io/software/api/repos/github/SharmaLlama/ticktack"}, {"uid": "github/assumpcaothiago/NRPyElliptic", "html_url": "https://rseng.github.io/software/repository/github/assumpcaothiago/NRPyElliptic", "api_url": "https://rseng.github.io/software/api/repos/github/assumpcaothiago/NRPyElliptic"}, {"uid": "github/RobertHTyler/TROPF", "html_url": "https://rseng.github.io/software/repository/github/RobertHTyler/TROPF", "api_url": "https://rseng.github.io/software/api/repos/github/RobertHTyler/TROPF"}, {"uid": "github/BIMSBbioinfo/pigx_scrnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_scrnaseq"}, {"uid": "github/BIMSBbioinfo/pigx_rnaseq", "html_url": "https://rseng.github.io/software/repository/github/BIMSBbioinfo/pigx_rnaseq", "api_url": "https://rseng.github.io/software/api/repos/github/BIMSBbioinfo/pigx_rnaseq"}, {"uid": "github/dieghernan/tidyterra", "html_url": "https://rseng.github.io/software/repository/github/dieghernan/tidyterra", "api_url": "https://rseng.github.io/software/api/repos/github/dieghernan/tidyterra"}, {"uid": "github/acerbilab/pybads", "html_url": "https://rseng.github.io/software/repository/github/acerbilab/pybads", "api_url": "https://rseng.github.io/software/api/repos/github/acerbilab/pybads"}, {"uid": "github/Autostronomy/AstroPhot", "html_url": "https://rseng.github.io/software/repository/github/Autostronomy/AstroPhot", "api_url": "https://rseng.github.io/software/api/repos/github/Autostronomy/AstroPhot"}, {"uid": "github/luxsrc/gray", "html_url": "https://rseng.github.io/software/repository/github/luxsrc/gray", "api_url": "https://rseng.github.io/software/api/repos/github/luxsrc/gray"}, {"uid": "github/delve-team/delve", "html_url": "https://rseng.github.io/software/repository/github/delve-team/delve", "api_url": "https://rseng.github.io/software/api/repos/github/delve-team/delve"}, {"uid": "github/labsyspharm/minerva-story", "html_url": "https://rseng.github.io/software/repository/github/labsyspharm/minerva-story", "api_url": "https://rseng.github.io/software/api/repos/github/labsyspharm/minerva-story"}, {"uid": "github/tqsd/photon_weave", "html_url": "https://rseng.github.io/software/repository/github/tqsd/photon_weave", "api_url": "https://rseng.github.io/software/api/repos/github/tqsd/photon_weave"}, {"uid": "github/opnavlab/sonic", "html_url": "https://rseng.github.io/software/repository/github/opnavlab/sonic", "api_url": "https://rseng.github.io/software/api/repos/github/opnavlab/sonic"}, {"uid": "github/darthoctopus/reggae", "html_url": "https://rseng.github.io/software/repository/github/darthoctopus/reggae", "api_url": "https://rseng.github.io/software/api/repos/github/darthoctopus/reggae"}, {"uid": "github/astroML/gatspy", "html_url": "https://rseng.github.io/software/repository/github/astroML/gatspy", "api_url": "https://rseng.github.io/software/api/repos/github/astroML/gatspy"}, {"uid": "github/mtholder/ncl", "html_url": "https://rseng.github.io/software/repository/github/mtholder/ncl", "api_url": "https://rseng.github.io/software/api/repos/github/mtholder/ncl"}, {"uid": "github/joshspeagle/dynesty", "html_url": "https://rseng.github.io/software/repository/github/joshspeagle/dynesty", "api_url": "https://rseng.github.io/software/api/repos/github/joshspeagle/dynesty"}, {"uid": "github/Schuch666/eva3dm", "html_url": "https://rseng.github.io/software/repository/github/Schuch666/eva3dm", "api_url": "https://rseng.github.io/software/api/repos/github/Schuch666/eva3dm"}, {"uid": "github/GRChombo/GRFolres", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRFolres", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRFolres"}, {"uid": "github/GRChombo/GRChombo", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRChombo", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRChombo"}, {"uid": "github/GRChombo/GRDzhadzha", "html_url": "https://rseng.github.io/software/repository/github/GRChombo/GRDzhadzha", "api_url": "https://rseng.github.io/software/api/repos/github/GRChombo/GRDzhadzha"}, {"uid": "github/ahmedmagds/GNUVID", "html_url": "https://rseng.github.io/software/repository/github/ahmedmagds/GNUVID", "api_url": "https://rseng.github.io/software/api/repos/github/ahmedmagds/GNUVID"}, {"uid": "github/Trybnetic/paat", "html_url": "https://rseng.github.io/software/repository/github/Trybnetic/paat", "api_url": "https://rseng.github.io/software/api/repos/github/Trybnetic/paat"}, {"uid": "github/ixkael/QuickSip", "html_url": "https://rseng.github.io/software/repository/github/ixkael/QuickSip", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/QuickSip"}, {"uid": "github/ixkael/Delight", "html_url": "https://rseng.github.io/software/repository/github/ixkael/Delight", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/Delight"}, {"uid": "github/ixkael/3DEX", "html_url": "https://rseng.github.io/software/repository/github/ixkael/3DEX", "api_url": "https://rseng.github.io/software/api/repos/github/ixkael/3DEX"}, {"uid": "github/palaimon/ipyannotator", "html_url": "https://rseng.github.io/software/repository/github/palaimon/ipyannotator", "api_url": "https://rseng.github.io/software/api/repos/github/palaimon/ipyannotator"}, {"uid": "github/danxhuber/galclassify", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/galclassify", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/galclassify"}, {"uid": "github/danxhuber/evolstate", "html_url": "https://rseng.github.io/software/repository/github/danxhuber/evolstate", "api_url": "https://rseng.github.io/software/api/repos/github/danxhuber/evolstate"}, {"uid": "github/caracal-pipeline/caracal", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/caracal", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/caracal"}, {"uid": "github/caracal-pipeline/stimela", "html_url": "https://rseng.github.io/software/repository/github/caracal-pipeline/stimela", "api_url": "https://rseng.github.io/software/api/repos/github/caracal-pipeline/stimela"}, {"uid": "github/Razumovskyy/MARFA", "html_url": "https://rseng.github.io/software/repository/github/Razumovskyy/MARFA", "api_url": "https://rseng.github.io/software/api/repos/github/Razumovskyy/MARFA"}, {"uid": "github/openvax/pyensembl", "html_url": "https://rseng.github.io/software/repository/github/openvax/pyensembl", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/pyensembl"}, {"uid": "github/openvax/mhcflurry", "html_url": "https://rseng.github.io/software/repository/github/openvax/mhcflurry", "api_url": "https://rseng.github.io/software/api/repos/github/openvax/mhcflurry"}, {"uid": "github/thachnguyen/CRISPRnano", "html_url": "https://rseng.github.io/software/repository/github/thachnguyen/CRISPRnano", "api_url": "https://rseng.github.io/software/api/repos/github/thachnguyen/CRISPRnano"}, {"uid": "github/ConnorStoneAstro/AutoProf", "html_url": "https://rseng.github.io/software/repository/github/ConnorStoneAstro/AutoProf", "api_url": "https://rseng.github.io/software/api/repos/github/ConnorStoneAstro/AutoProf"}, {"uid": "github/Chenmi0619/GALMoss", "html_url": "https://rseng.github.io/software/repository/github/Chenmi0619/GALMoss", "api_url": "https://rseng.github.io/software/api/repos/github/Chenmi0619/GALMoss"}, {"uid": "github/cbottrell/realsim_ifs", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/realsim_ifs", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/realsim_ifs"}, {"uid": "github/cbottrell/RealSim", "html_url": "https://rseng.github.io/software/repository/github/cbottrell/RealSim", "api_url": "https://rseng.github.io/software/api/repos/github/cbottrell/RealSim"}, {"uid": "github/vfonov/DARQ", "html_url": "https://rseng.github.io/software/repository/github/vfonov/DARQ", "api_url": "https://rseng.github.io/software/api/repos/github/vfonov/DARQ"}, {"uid": "github/CompGenomeLab/boquila", "html_url": "https://rseng.github.io/software/repository/github/CompGenomeLab/boquila", "api_url": "https://rseng.github.io/software/api/repos/github/CompGenomeLab/boquila"}, {"uid": "github/pkestene/xsmurf", "html_url": "https://rseng.github.io/software/repository/github/pkestene/xsmurf", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/xsmurf"}, {"uid": "github/pkestene/ramsesGPU", "html_url": "https://rseng.github.io/software/repository/github/pkestene/ramsesGPU", "api_url": "https://rseng.github.io/software/api/repos/github/pkestene/ramsesGPU"}, {"uid": "github/SkywalkerLuke/TransHLA", "html_url": "https://rseng.github.io/software/repository/github/SkywalkerLuke/TransHLA", "api_url": "https://rseng.github.io/software/api/repos/github/SkywalkerLuke/TransHLA"}, {"uid": "github/parthenon-hpc-lab/parthenon", "html_url": "https://rseng.github.io/software/repository/github/parthenon-hpc-lab/parthenon", "api_url": "https://rseng.github.io/software/api/repos/github/parthenon-hpc-lab/parthenon"}, {"uid": "github/PGB-LIV/MHCVision", "html_url": "https://rseng.github.io/software/repository/github/PGB-LIV/MHCVision", "api_url": "https://rseng.github.io/software/api/repos/github/PGB-LIV/MHCVision"}, {"uid": "github/devries/analytic_infall", "html_url": "https://rseng.github.io/software/repository/github/devries/analytic_infall", "api_url": "https://rseng.github.io/software/api/repos/github/devries/analytic_infall"}, {"uid": "github/sneumann/xcms", "html_url": "https://rseng.github.io/software/repository/github/sneumann/xcms", "api_url": "https://rseng.github.io/software/api/repos/github/sneumann/xcms"}, {"uid": "github/JinxinMonash/PhageGE", "html_url": "https://rseng.github.io/software/repository/github/JinxinMonash/PhageGE", "api_url": "https://rseng.github.io/software/api/repos/github/JinxinMonash/PhageGE"}, {"uid": "github/fair-workflows/nanopub", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/nanopub", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/nanopub"}, {"uid": "github/fair-workflows/NanopubJL", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/NanopubJL", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/NanopubJL"}, {"uid": "github/fair-workflows/fairworkflows", "html_url": "https://rseng.github.io/software/repository/github/fair-workflows/fairworkflows", "api_url": "https://rseng.github.io/software/api/repos/github/fair-workflows/fairworkflows"}, {"uid": "github/fast-data-transfer/fdt", "html_url": "https://rseng.github.io/software/repository/github/fast-data-transfer/fdt", "api_url": "https://rseng.github.io/software/api/repos/github/fast-data-transfer/fdt"}, {"uid": "github/online-behaviour/find-journalists", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/find-journalists", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/find-journalists"}, {"uid": "github/online-behaviour/machine-learning", "html_url": "https://rseng.github.io/software/repository/github/online-behaviour/machine-learning", "api_url": "https://rseng.github.io/software/api/repos/github/online-behaviour/machine-learning"}, {"uid": "github/sdss/marvin", "html_url": "https://rseng.github.io/software/repository/github/sdss/marvin", "api_url": "https://rseng.github.io/software/api/repos/github/sdss/marvin"}, {"uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", "html_url": "https://rseng.github.io/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/AndreinaCastillo/Genie_manuscript_data_analysis"}, {"uid": "github/Nicole-DH/ACP-MLC", "html_url": "https://rseng.github.io/software/repository/github/Nicole-DH/ACP-MLC", "api_url": "https://rseng.github.io/software/api/repos/github/Nicole-DH/ACP-MLC"}, {"uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "html_url": "https://rseng.github.io/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", "api_url": "https://rseng.github.io/software/api/repos/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever"}, {"uid": "github/KolmogorovLab/Severus", "html_url": "https://rseng.github.io/software/repository/github/KolmogorovLab/Severus", "api_url": "https://rseng.github.io/software/api/repos/github/KolmogorovLab/Severus"}, {"uid": "github/chandra-marx/marxs", "html_url": "https://rseng.github.io/software/repository/github/chandra-marx/marxs", "api_url": "https://rseng.github.io/software/api/repos/github/chandra-marx/marxs"}, {"uid": "github/jonschwenk/RivGraph", "html_url": "https://rseng.github.io/software/repository/github/jonschwenk/RivGraph", "api_url": "https://rseng.github.io/software/api/repos/github/jonschwenk/RivGraph"}, {"uid": "github/coccoinomane/song", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/song", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/song"}, {"uid": "github/coccoinomane/zelda", "html_url": "https://rseng.github.io/software/repository/github/coccoinomane/zelda", "api_url": "https://rseng.github.io/software/api/repos/github/coccoinomane/zelda"}, {"uid": "github/ylxu05/HN-PPISP", "html_url": "https://rseng.github.io/software/repository/github/ylxu05/HN-PPISP", "api_url": "https://rseng.github.io/software/api/repos/github/ylxu05/HN-PPISP"}, {"uid": "github/stegmaja/TSE", "html_url": "https://rseng.github.io/software/repository/github/stegmaja/TSE", "api_url": "https://rseng.github.io/software/api/repos/github/stegmaja/TSE"}, {"uid": "github/zjupgx/modig", "html_url": "https://rseng.github.io/software/repository/github/zjupgx/modig", "api_url": "https://rseng.github.io/software/api/repos/github/zjupgx/modig"}, {"uid": "github/Crompulence/cpl-library", "html_url": "https://rseng.github.io/software/repository/github/Crompulence/cpl-library", "api_url": "https://rseng.github.io/software/api/repos/github/Crompulence/cpl-library"}, {"uid": "github/agurvich/FIRE_studio", "html_url": "https://rseng.github.io/software/repository/github/agurvich/FIRE_studio", "api_url": "https://rseng.github.io/software/api/repos/github/agurvich/FIRE_studio"}, {"uid": "github/wilsonrljr/sysidentpy", "html_url": "https://rseng.github.io/software/repository/github/wilsonrljr/sysidentpy", "api_url": "https://rseng.github.io/software/api/repos/github/wilsonrljr/sysidentpy"}, {"uid": "github/rcsb/mmtf-python", "html_url": "https://rseng.github.io/software/repository/github/rcsb/mmtf-python", "api_url": "https://rseng.github.io/software/api/repos/github/rcsb/mmtf-python"}, {"uid": "github/918particle/AskaryanModule", "html_url": "https://rseng.github.io/software/repository/github/918particle/AskaryanModule", "api_url": "https://rseng.github.io/software/api/repos/github/918particle/AskaryanModule"}, {"uid": "github/astronomyk/SimCADO", "html_url": "https://rseng.github.io/software/repository/github/astronomyk/SimCADO", "api_url": "https://rseng.github.io/software/api/repos/github/astronomyk/SimCADO"}, {"uid": "github/VarStarDetect/varstardetect", "html_url": "https://rseng.github.io/software/repository/github/VarStarDetect/varstardetect", "api_url": "https://rseng.github.io/software/api/repos/github/VarStarDetect/varstardetect"}, {"uid": "github/e-koch/FilFinder", "html_url": "https://rseng.github.io/software/repository/github/e-koch/FilFinder", "api_url": "https://rseng.github.io/software/api/repos/github/e-koch/FilFinder"}, {"uid": "github/PedroBarbosa/VETA", "html_url": "https://rseng.github.io/software/repository/github/PedroBarbosa/VETA", "api_url": "https://rseng.github.io/software/api/repos/github/PedroBarbosa/VETA"}, {"uid": "github/kdmurray91/axe", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/axe", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/axe"}, {"uid": "github/kdmurray91/libqcpp", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqcpp", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqcpp"}, {"uid": "github/kdmurray91/libqes", "html_url": "https://rseng.github.io/software/repository/github/kdmurray91/libqes", "api_url": "https://rseng.github.io/software/api/repos/github/kdmurray91/libqes"}, {"uid": "github/agombolay/ribose-map", "html_url": "https://rseng.github.io/software/repository/github/agombolay/ribose-map", "api_url": "https://rseng.github.io/software/api/repos/github/agombolay/ribose-map"}, {"uid": "github/brainglobe/bg-atlasapi", "html_url": "https://rseng.github.io/software/repository/github/brainglobe/bg-atlasapi", "api_url": "https://rseng.github.io/software/api/repos/github/brainglobe/bg-atlasapi"}, {"uid": "github/bvalot/pyMLST", "html_url": "https://rseng.github.io/software/repository/github/bvalot/pyMLST", "api_url": "https://rseng.github.io/software/api/repos/github/bvalot/pyMLST"}, {"uid": "github/emsig/elfe3D", "html_url": "https://rseng.github.io/software/repository/github/emsig/elfe3D", "api_url": "https://rseng.github.io/software/api/repos/github/emsig/elfe3D"}, {"uid": "github/glasgowlab/MAGPIE", "html_url": "https://rseng.github.io/software/repository/github/glasgowlab/MAGPIE", "api_url": "https://rseng.github.io/software/api/repos/github/glasgowlab/MAGPIE"}, {"uid": "github/dingshandeng/diskmint", "html_url": "https://rseng.github.io/software/repository/github/dingshandeng/diskmint", "api_url": "https://rseng.github.io/software/api/repos/github/dingshandeng/diskmint"}, {"uid": "github/forceflow1049/phast", "html_url": "https://rseng.github.io/software/repository/github/forceflow1049/phast", "api_url": "https://rseng.github.io/software/api/repos/github/forceflow1049/phast"}, {"uid": "github/bcgsc/ntCard", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntCard", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntCard"}, {"uid": "github/bcgsc/TMBur", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/TMBur", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/TMBur"}, {"uid": "github/bcgsc/btllib", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/btllib", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/btllib"}, {"uid": "github/bcgsc/goldrush", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/goldrush", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/goldrush"}, {"uid": "github/bcgsc/longstitch", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/longstitch", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/longstitch"}, {"uid": "github/bcgsc/arcs", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/arcs", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/arcs"}, {"uid": "github/bcgsc/ntHash", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/ntHash", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/ntHash"}, {"uid": "github/bcgsc/abyss", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/abyss", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/abyss"}, {"uid": "github/bcgsc/NanoSim", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/NanoSim", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/NanoSim"}, {"uid": "github/bcgsc/tigmint", "html_url": "https://rseng.github.io/software/repository/github/bcgsc/tigmint", "api_url": "https://rseng.github.io/software/api/repos/github/bcgsc/tigmint"}, {"uid": "github/winni2k/abeona", "html_url": "https://rseng.github.io/software/repository/github/winni2k/abeona", "api_url": "https://rseng.github.io/software/api/repos/github/winni2k/abeona"}, {"uid": "github/mudit-jain90/i-SPin", "html_url": "https://rseng.github.io/software/repository/github/mudit-jain90/i-SPin", "api_url": "https://rseng.github.io/software/api/repos/github/mudit-jain90/i-SPin"}, {"uid": "github/dask/dask", "html_url": "https://rseng.github.io/software/repository/github/dask/dask", "api_url": "https://rseng.github.io/software/api/repos/github/dask/dask"}, {"uid": "github/levitsky/pyteomics", "html_url": "https://rseng.github.io/software/repository/github/levitsky/pyteomics", "api_url": "https://rseng.github.io/software/api/repos/github/levitsky/pyteomics"}, {"uid": "github/euroargodev/argopy", "html_url": "https://rseng.github.io/software/repository/github/euroargodev/argopy", "api_url": "https://rseng.github.io/software/api/repos/github/euroargodev/argopy"}, {"uid": "github/cellgeni/cells2visium", "html_url": "https://rseng.github.io/software/repository/github/cellgeni/cells2visium", "api_url": "https://rseng.github.io/software/api/repos/github/cellgeni/cells2visium"}, {"uid": "github/oloBion/Retip", "html_url": "https://rseng.github.io/software/repository/github/oloBion/Retip", "api_url": "https://rseng.github.io/software/api/repos/github/oloBion/Retip"}, {"uid": "github/JacksonBurns/astartes", "html_url": "https://rseng.github.io/software/repository/github/JacksonBurns/astartes", "api_url": "https://rseng.github.io/software/api/repos/github/JacksonBurns/astartes"}, {"uid": "github/toruseo/UXsim", "html_url": "https://rseng.github.io/software/repository/github/toruseo/UXsim", "api_url": "https://rseng.github.io/software/api/repos/github/toruseo/UXsim"}, {"uid": "github/cheerfuluser/tessreduce", "html_url": "https://rseng.github.io/software/repository/github/cheerfuluser/tessreduce", "api_url": "https://rseng.github.io/software/api/repos/github/cheerfuluser/tessreduce"}, {"uid": "github/aadya940/chainopy", "html_url": "https://rseng.github.io/software/repository/github/aadya940/chainopy", "api_url": "https://rseng.github.io/software/api/repos/github/aadya940/chainopy"}, {"uid": "github/ywx649999311/vizic", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/vizic", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/vizic"}, {"uid": "github/ywx649999311/EzTao", "html_url": "https://rseng.github.io/software/repository/github/ywx649999311/EzTao", "api_url": "https://rseng.github.io/software/api/repos/github/ywx649999311/EzTao"}, {"uid": "github/forrest-lab/scMatch", "html_url": "https://rseng.github.io/software/repository/github/forrest-lab/scMatch", "api_url": "https://rseng.github.io/software/api/repos/github/forrest-lab/scMatch"}, {"uid": "github/abonaldi/TRECS", "html_url": "https://rseng.github.io/software/repository/github/abonaldi/TRECS", "api_url": "https://rseng.github.io/software/api/repos/github/abonaldi/TRECS"}, {"uid": "github/youngkaneda/DemeterWatch", "html_url": "https://rseng.github.io/software/repository/github/youngkaneda/DemeterWatch", "api_url": "https://rseng.github.io/software/api/repos/github/youngkaneda/DemeterWatch"}, {"uid": "github/nhurleywalker/fits_warp", "html_url": "https://rseng.github.io/software/repository/github/nhurleywalker/fits_warp", "api_url": "https://rseng.github.io/software/api/repos/github/nhurleywalker/fits_warp"}, {"uid": "github/bids-apps/giga_connectome", "html_url": "https://rseng.github.io/software/repository/github/bids-apps/giga_connectome", "api_url": "https://rseng.github.io/software/api/repos/github/bids-apps/giga_connectome"}, {"uid": "github/STEllAR-GROUP/hpx", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/hpx", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/hpx"}, {"uid": "github/STEllAR-GROUP/octotiger", "html_url": "https://rseng.github.io/software/repository/github/STEllAR-GROUP/octotiger", "api_url": "https://rseng.github.io/software/api/repos/github/STEllAR-GROUP/octotiger"}, {"uid": "github/DenaJGibbon/gibbonNetR", "html_url": "https://rseng.github.io/software/repository/github/DenaJGibbon/gibbonNetR", "api_url": "https://rseng.github.io/software/api/repos/github/DenaJGibbon/gibbonNetR"}, {"uid": "github/institut-de-genomique/HAPO-G", "html_url": "https://rseng.github.io/software/repository/github/institut-de-genomique/HAPO-G", "api_url": "https://rseng.github.io/software/api/repos/github/institut-de-genomique/HAPO-G"}, {"uid": "github/amkram/shusher", "html_url": "https://rseng.github.io/software/repository/github/amkram/shusher", "api_url": "https://rseng.github.io/software/api/repos/github/amkram/shusher"}, {"uid": "github/rhyspoulton/OrbWeaver", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/OrbWeaver", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/OrbWeaver"}, {"uid": "github/rhyspoulton/WhereWolf", "html_url": "https://rseng.github.io/software/repository/github/rhyspoulton/WhereWolf", "api_url": "https://rseng.github.io/software/api/repos/github/rhyspoulton/WhereWolf"}, {"uid": "github/tfwillems/HipSTR", "html_url": "https://rseng.github.io/software/repository/github/tfwillems/HipSTR", "api_url": "https://rseng.github.io/software/api/repos/github/tfwillems/HipSTR"}, {"uid": "github/david-bogdan-r/ARTEMIS", "html_url": "https://rseng.github.io/software/repository/github/david-bogdan-r/ARTEMIS", "api_url": "https://rseng.github.io/software/api/repos/github/david-bogdan-r/ARTEMIS"}, {"uid": "github/schulze61/RhoPop", "html_url": "https://rseng.github.io/software/repository/github/schulze61/RhoPop", "api_url": "https://rseng.github.io/software/api/repos/github/schulze61/RhoPop"}, {"uid": "github/idefix-code/idefix", "html_url": "https://rseng.github.io/software/repository/github/idefix-code/idefix", "api_url": "https://rseng.github.io/software/api/repos/github/idefix-code/idefix"}, {"uid": "github/mawenlong2016/DeepAnnotation", "html_url": "https://rseng.github.io/software/repository/github/mawenlong2016/DeepAnnotation", "api_url": "https://rseng.github.io/software/api/repos/github/mawenlong2016/DeepAnnotation"}, {"uid": "github/galsci/pysm", "html_url": "https://rseng.github.io/software/repository/github/galsci/pysm", "api_url": "https://rseng.github.io/software/api/repos/github/galsci/pysm"}, {"uid": "github/leishenggit/CircleBase", "html_url": "https://rseng.github.io/software/repository/github/leishenggit/CircleBase", "api_url": "https://rseng.github.io/software/api/repos/github/leishenggit/CircleBase"}, {"uid": "github/tool-bin/ukbcc", "html_url": "https://rseng.github.io/software/repository/github/tool-bin/ukbcc", "api_url": "https://rseng.github.io/software/api/repos/github/tool-bin/ukbcc"}, {"uid": "github/Quantum-Dynamics-Hub/libra-code", "html_url": "https://rseng.github.io/software/repository/github/Quantum-Dynamics-Hub/libra-code", "api_url": "https://rseng.github.io/software/api/repos/github/Quantum-Dynamics-Hub/libra-code"}, {"uid": "github/InfOmics/PanDelos-frags", "html_url": "https://rseng.github.io/software/repository/github/InfOmics/PanDelos-frags", "api_url": "https://rseng.github.io/software/api/repos/github/InfOmics/PanDelos-frags"}, {"uid": "github/Genentech/SPEX", "html_url": "https://rseng.github.io/software/repository/github/Genentech/SPEX", "api_url": "https://rseng.github.io/software/api/repos/github/Genentech/SPEX"}, {"uid": "github/max0x7ba/atomic_queue", "html_url": "https://rseng.github.io/software/repository/github/max0x7ba/atomic_queue", "api_url": "https://rseng.github.io/software/api/repos/github/max0x7ba/atomic_queue"}, {"uid": "github/AndrewAnnex/SpiceyPy", "html_url": "https://rseng.github.io/software/repository/github/AndrewAnnex/SpiceyPy", "api_url": "https://rseng.github.io/software/api/repos/github/AndrewAnnex/SpiceyPy"}, {"uid": "github/tsipkens/atems", "html_url": "https://rseng.github.io/software/repository/github/tsipkens/atems", "api_url": "https://rseng.github.io/software/api/repos/github/tsipkens/atems"}, {"uid": "github/mscaudill/openseize", "html_url": "https://rseng.github.io/software/repository/github/mscaudill/openseize", "api_url": "https://rseng.github.io/software/api/repos/github/mscaudill/openseize"}, {"uid": "github/NickSwainston/pulsar_spectra", "html_url": "https://rseng.github.io/software/repository/github/NickSwainston/pulsar_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/NickSwainston/pulsar_spectra"}, {"uid": "github/GreycLab/gmic", "html_url": "https://rseng.github.io/software/repository/github/GreycLab/gmic", "api_url": "https://rseng.github.io/software/api/repos/github/GreycLab/gmic"}, {"uid": "github/MonashSmartStructures/ospgrillage", "html_url": "https://rseng.github.io/software/repository/github/MonashSmartStructures/ospgrillage", "api_url": "https://rseng.github.io/software/api/repos/github/MonashSmartStructures/ospgrillage"}, {"uid": "github/joboog/r2ogs6", "html_url": "https://rseng.github.io/software/repository/github/joboog/r2ogs6", "api_url": "https://rseng.github.io/software/api/repos/github/joboog/r2ogs6"}, {"uid": "github/GiMattia/PyPLUTO", "html_url": "https://rseng.github.io/software/repository/github/GiMattia/PyPLUTO", "api_url": "https://rseng.github.io/software/api/repos/github/GiMattia/PyPLUTO"}, {"uid": "github/FengTaoSMU/MOBFinder", "html_url": "https://rseng.github.io/software/repository/github/FengTaoSMU/MOBFinder", "api_url": "https://rseng.github.io/software/api/repos/github/FengTaoSMU/MOBFinder"}, {"uid": "github/jmackereth/orbit-estimation", "html_url": "https://rseng.github.io/software/repository/github/jmackereth/orbit-estimation", "api_url": "https://rseng.github.io/software/api/repos/github/jmackereth/orbit-estimation"}, {"uid": "github/fhtouma/subgen2", "html_url": "https://rseng.github.io/software/repository/github/fhtouma/subgen2", "api_url": "https://rseng.github.io/software/api/repos/github/fhtouma/subgen2"}, {"uid": "github/ssadedin/bazam", "html_url": "https://rseng.github.io/software/repository/github/ssadedin/bazam", "api_url": "https://rseng.github.io/software/api/repos/github/ssadedin/bazam"}, {"uid": "github/Jurgenvilla/moons-sim", "html_url": "https://rseng.github.io/software/repository/github/Jurgenvilla/moons-sim", "api_url": "https://rseng.github.io/software/api/repos/github/Jurgenvilla/moons-sim"}, {"uid": "github/MichelleLochner/astronomaly", "html_url": "https://rseng.github.io/software/repository/github/MichelleLochner/astronomaly", "api_url": "https://rseng.github.io/software/api/repos/github/MichelleLochner/astronomaly"}, {"uid": "github/TabeaSonnenschein/UrbHealth-ABM", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/UrbHealth-ABM"}, {"uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions"}, {"uid": "github/TabeaSonnenschein/GenSynthPop", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/GenSynthPop", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/GenSynthPop"}, {"uid": "github/TabeaSonnenschein/CellAutDisp", "html_url": "https://rseng.github.io/software/repository/github/TabeaSonnenschein/CellAutDisp", "api_url": "https://rseng.github.io/software/api/repos/github/TabeaSonnenschein/CellAutDisp"}, {"uid": "github/CGAL/cgal", "html_url": "https://rseng.github.io/software/repository/github/CGAL/cgal", "api_url": "https://rseng.github.io/software/api/repos/github/CGAL/cgal"}, {"uid": "github/starkit/wsynphot", "html_url": "https://rseng.github.io/software/repository/github/starkit/wsynphot", "api_url": "https://rseng.github.io/software/api/repos/github/starkit/wsynphot"}, {"uid": "github/IPK-BIT/divbrowse", "html_url": "https://rseng.github.io/software/repository/github/IPK-BIT/divbrowse", "api_url": "https://rseng.github.io/software/api/repos/github/IPK-BIT/divbrowse"}, {"uid": "github/javicarron/pynkowski", "html_url": "https://rseng.github.io/software/repository/github/javicarron/pynkowski", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/pynkowski"}, {"uid": "github/javicarron/mtneedlet", "html_url": "https://rseng.github.io/software/repository/github/javicarron/mtneedlet", "api_url": "https://rseng.github.io/software/api/repos/github/javicarron/mtneedlet"}, {"uid": "github/qqpigass/FREEPII", "html_url": "https://rseng.github.io/software/repository/github/qqpigass/FREEPII", "api_url": "https://rseng.github.io/software/api/repos/github/qqpigass/FREEPII"}, {"uid": "github/sbailey/empca", "html_url": "https://rseng.github.io/software/repository/github/sbailey/empca", "api_url": "https://rseng.github.io/software/api/repos/github/sbailey/empca"}, {"uid": "github/unfoldtoolbox/UnfoldSim.jl", "html_url": "https://rseng.github.io/software/repository/github/unfoldtoolbox/UnfoldSim.jl", "api_url": "https://rseng.github.io/software/api/repos/github/unfoldtoolbox/UnfoldSim.jl"}, {"uid": "github/JIBSIL/DistriFS", "html_url": "https://rseng.github.io/software/repository/github/JIBSIL/DistriFS", "api_url": "https://rseng.github.io/software/api/repos/github/JIBSIL/DistriFS"}, {"uid": "github/manzt/anywidget", "html_url": "https://rseng.github.io/software/repository/github/manzt/anywidget", "api_url": "https://rseng.github.io/software/api/repos/github/manzt/anywidget"}, {"uid": "github/BGPS/distance-omnibus", "html_url": "https://rseng.github.io/software/repository/github/BGPS/distance-omnibus", "api_url": "https://rseng.github.io/software/api/repos/github/BGPS/distance-omnibus"}, {"uid": "github/dshawul/NebulaSEM", "html_url": "https://rseng.github.io/software/repository/github/dshawul/NebulaSEM", "api_url": "https://rseng.github.io/software/api/repos/github/dshawul/NebulaSEM"}, {"uid": "github/datngu/Circall", "html_url": "https://rseng.github.io/software/repository/github/datngu/Circall", "api_url": "https://rseng.github.io/software/api/repos/github/datngu/Circall"}, {"uid": "github/Jesper-Karsten/MBASC", "html_url": "https://rseng.github.io/software/repository/github/Jesper-Karsten/MBASC", "api_url": "https://rseng.github.io/software/api/repos/github/Jesper-Karsten/MBASC"}, {"uid": "github/jgagneastro/CoMover", "html_url": "https://rseng.github.io/software/repository/github/jgagneastro/CoMover", "api_url": "https://rseng.github.io/software/api/repos/github/jgagneastro/CoMover"}, {"uid": "github/flaminiafortuni/FORECAST", "html_url": "https://rseng.github.io/software/repository/github/flaminiafortuni/FORECAST", "api_url": "https://rseng.github.io/software/api/repos/github/flaminiafortuni/FORECAST"}, {"uid": "github/online-ml/deep-river", "html_url": "https://rseng.github.io/software/repository/github/online-ml/deep-river", "api_url": "https://rseng.github.io/software/api/repos/github/online-ml/deep-river"}, {"uid": "github/rmjarvis/Piff", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/Piff", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/Piff"}, {"uid": "github/rmjarvis/TreeCorr", "html_url": "https://rseng.github.io/software/repository/github/rmjarvis/TreeCorr", "api_url": "https://rseng.github.io/software/api/repos/github/rmjarvis/TreeCorr"}, {"uid": "github/donishadsmith/neurocaps", "html_url": "https://rseng.github.io/software/repository/github/donishadsmith/neurocaps", "api_url": "https://rseng.github.io/software/api/repos/github/donishadsmith/neurocaps"}, {"uid": "github/octopus-sensing/octopus-sensing", "html_url": "https://rseng.github.io/software/repository/github/octopus-sensing/octopus-sensing", "api_url": "https://rseng.github.io/software/api/repos/github/octopus-sensing/octopus-sensing"}, {"uid": "github/toddy15/medicalterms", "html_url": "https://rseng.github.io/software/repository/github/toddy15/medicalterms", "api_url": "https://rseng.github.io/software/api/repos/github/toddy15/medicalterms"}, {"uid": "github/rivasiker/PhaseTypeR", "html_url": "https://rseng.github.io/software/repository/github/rivasiker/PhaseTypeR", "api_url": "https://rseng.github.io/software/api/repos/github/rivasiker/PhaseTypeR"}, {"uid": "github/sterinaldi/FIGARO", "html_url": "https://rseng.github.io/software/repository/github/sterinaldi/FIGARO", "api_url": "https://rseng.github.io/software/api/repos/github/sterinaldi/FIGARO"}, {"uid": "github/indrops/indrops", "html_url": "https://rseng.github.io/software/repository/github/indrops/indrops", "api_url": "https://rseng.github.io/software/api/repos/github/indrops/indrops"}, {"uid": "github/ComputationalPhysiology/simcardems", "html_url": "https://rseng.github.io/software/repository/github/ComputationalPhysiology/simcardems", "api_url": "https://rseng.github.io/software/api/repos/github/ComputationalPhysiology/simcardems"}, {"uid": "github/tkzeng/Pangolin", "html_url": "https://rseng.github.io/software/repository/github/tkzeng/Pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/tkzeng/Pangolin"}, {"uid": "github/mommermi/photometrypipeline", "html_url": "https://rseng.github.io/software/repository/github/mommermi/photometrypipeline", "api_url": "https://rseng.github.io/software/api/repos/github/mommermi/photometrypipeline"}, {"uid": "github/lgbouma/gyro-interp", "html_url": "https://rseng.github.io/software/repository/github/lgbouma/gyro-interp", "api_url": "https://rseng.github.io/software/api/repos/github/lgbouma/gyro-interp"}, {"uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", "html_url": "https://rseng.github.io/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", "api_url": "https://rseng.github.io/software/api/repos/github/Biomedical-Imaging-Group/Steer-n-Detect"}, {"uid": "github/christinahedges/TESS-SIP", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/TESS-SIP", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/TESS-SIP"}, {"uid": "github/christinahedges/contaminante", "html_url": "https://rseng.github.io/software/repository/github/christinahedges/contaminante", "api_url": "https://rseng.github.io/software/api/repos/github/christinahedges/contaminante"}, {"uid": "github/PeterDenton/ANA", "html_url": "https://rseng.github.io/software/repository/github/PeterDenton/ANA", "api_url": "https://rseng.github.io/software/api/repos/github/PeterDenton/ANA"}, {"uid": "github/USU-Analytics-Solution-Center/Bruno.jl", "html_url": "https://rseng.github.io/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", "api_url": "https://rseng.github.io/software/api/repos/github/USU-Analytics-Solution-Center/Bruno.jl"}, {"uid": "github/szymon-datalions/pyinterpolate", "html_url": "https://rseng.github.io/software/repository/github/szymon-datalions/pyinterpolate", "api_url": "https://rseng.github.io/software/api/repos/github/szymon-datalions/pyinterpolate"}, {"uid": "github/samsledje/ConPLex_dev", "html_url": "https://rseng.github.io/software/repository/github/samsledje/ConPLex_dev", "api_url": "https://rseng.github.io/software/api/repos/github/samsledje/ConPLex_dev"}, {"uid": "github/trchudley/pdemtools", "html_url": "https://rseng.github.io/software/repository/github/trchudley/pdemtools", "api_url": "https://rseng.github.io/software/api/repos/github/trchudley/pdemtools"}, {"uid": "github/kim554/wdec", "html_url": "https://rseng.github.io/software/repository/github/kim554/wdec", "api_url": "https://rseng.github.io/software/api/repos/github/kim554/wdec"}, {"uid": "github/ericagol/NbodyGradient.jl", "html_url": "https://rseng.github.io/software/repository/github/ericagol/NbodyGradient.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/NbodyGradient.jl"}, {"uid": "github/ericagol/TTVFaster", "html_url": "https://rseng.github.io/software/repository/github/ericagol/TTVFaster", "api_url": "https://rseng.github.io/software/api/repos/github/ericagol/TTVFaster"}, {"uid": "github/Planet-AI-GmbH/tfaip", "html_url": "https://rseng.github.io/software/repository/github/Planet-AI-GmbH/tfaip", "api_url": "https://rseng.github.io/software/api/repos/github/Planet-AI-GmbH/tfaip"}, {"uid": "github/MolecularAI/DockStreamCommunity", "html_url": "https://rseng.github.io/software/repository/github/MolecularAI/DockStreamCommunity", "api_url": "https://rseng.github.io/software/api/repos/github/MolecularAI/DockStreamCommunity"}, {"uid": "github/markfortune/luas", "html_url": "https://rseng.github.io/software/repository/github/markfortune/luas", "api_url": "https://rseng.github.io/software/api/repos/github/markfortune/luas"}, {"uid": "github/brian-team/brian2", "html_url": "https://rseng.github.io/software/repository/github/brian-team/brian2", "api_url": "https://rseng.github.io/software/api/repos/github/brian-team/brian2"}, {"uid": "github/benedictpaten/marginPhase", "html_url": "https://rseng.github.io/software/repository/github/benedictpaten/marginPhase", "api_url": "https://rseng.github.io/software/api/repos/github/benedictpaten/marginPhase"}, {"uid": "github/afukushima/DiffCorr", "html_url": "https://rseng.github.io/software/repository/github/afukushima/DiffCorr", "api_url": "https://rseng.github.io/software/api/repos/github/afukushima/DiffCorr"}, {"uid": "github/Jeremycouturier/NcorpiON", "html_url": "https://rseng.github.io/software/repository/github/Jeremycouturier/NcorpiON", "api_url": "https://rseng.github.io/software/api/repos/github/Jeremycouturier/NcorpiON"}, {"uid": "github/mgm8/pyngham", "html_url": "https://rseng.github.io/software/repository/github/mgm8/pyngham", "api_url": "https://rseng.github.io/software/api/repos/github/mgm8/pyngham"}, {"uid": "github/lofar-astron/DP3", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/DP3", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/DP3"}, {"uid": "github/lofar-astron/RMextract", "html_url": "https://rseng.github.io/software/repository/github/lofar-astron/RMextract", "api_url": "https://rseng.github.io/software/api/repos/github/lofar-astron/RMextract"}, {"uid": "github/ANSES-Ploufragan/vvv2_display", "html_url": "https://rseng.github.io/software/repository/github/ANSES-Ploufragan/vvv2_display", "api_url": "https://rseng.github.io/software/api/repos/github/ANSES-Ploufragan/vvv2_display"}, {"uid": "github/PaulKuin/uvotpy", "html_url": "https://rseng.github.io/software/repository/github/PaulKuin/uvotpy", "api_url": "https://rseng.github.io/software/api/repos/github/PaulKuin/uvotpy"}, {"uid": "github/nickfarrow/GalacticDNSMass", "html_url": "https://rseng.github.io/software/repository/github/nickfarrow/GalacticDNSMass", "api_url": "https://rseng.github.io/software/api/repos/github/nickfarrow/GalacticDNSMass"}, {"uid": "github/DeepRegNet/DeepReg", "html_url": "https://rseng.github.io/software/repository/github/DeepRegNet/DeepReg", "api_url": "https://rseng.github.io/software/api/repos/github/DeepRegNet/DeepReg"}, {"uid": "github/JCGonzS/mechnetor", "html_url": "https://rseng.github.io/software/repository/github/JCGonzS/mechnetor", "api_url": "https://rseng.github.io/software/api/repos/github/JCGonzS/mechnetor"}, {"uid": "github/JuliaMatrices/BandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BandedMatrices.jl"}, {"uid": "github/JuliaMatrices/BlockBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/BlockBandedMatrices.jl"}, {"uid": "github/JuliaMatrices/LazyBandedMatrices.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaMatrices/LazyBandedMatrices.jl"}, {"uid": "github/RoryChenXY/DataRepExp_public", "html_url": "https://rseng.github.io/software/repository/github/RoryChenXY/DataRepExp_public", "api_url": "https://rseng.github.io/software/api/repos/github/RoryChenXY/DataRepExp_public"}, {"uid": "github/a8864666-rgb/fgoc", "html_url": "https://rseng.github.io/software/repository/github/a8864666-rgb/fgoc", "api_url": "https://rseng.github.io/software/api/repos/github/a8864666-rgb/fgoc"}, {"uid": "github/ahwkuepper/mcluster", "html_url": "https://rseng.github.io/software/repository/github/ahwkuepper/mcluster", "api_url": "https://rseng.github.io/software/api/repos/github/ahwkuepper/mcluster"}, {"uid": "github/alicia-ziying-yang/conTEXT-explorer", "html_url": "https://rseng.github.io/software/repository/github/alicia-ziying-yang/conTEXT-explorer", "api_url": "https://rseng.github.io/software/api/repos/github/alicia-ziying-yang/conTEXT-explorer"}, {"uid": "github/USNavalResearchLaboratory/eispac", "html_url": "https://rseng.github.io/software/repository/github/USNavalResearchLaboratory/eispac", "api_url": "https://rseng.github.io/software/api/repos/github/USNavalResearchLaboratory/eispac"}, {"uid": "github/cabb99/open3spn2", "html_url": "https://rseng.github.io/software/repository/github/cabb99/open3spn2", "api_url": "https://rseng.github.io/software/api/repos/github/cabb99/open3spn2"}, {"uid": "github/rehamelkholy/NutMaat", "html_url": "https://rseng.github.io/software/repository/github/rehamelkholy/NutMaat", "api_url": "https://rseng.github.io/software/api/repos/github/rehamelkholy/NutMaat"}, {"uid": "github/JPenuchot/ctbench", "html_url": "https://rseng.github.io/software/repository/github/JPenuchot/ctbench", "api_url": "https://rseng.github.io/software/api/repos/github/JPenuchot/ctbench"}, {"uid": "github/raphael-group/chisel", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/chisel", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/chisel"}, {"uid": "github/raphael-group/hatchet", "html_url": "https://rseng.github.io/software/repository/github/raphael-group/hatchet", "api_url": "https://rseng.github.io/software/api/repos/github/raphael-group/hatchet"}, {"uid": "github/COMBINE-lab/cuttlefish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/cuttlefish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/cuttlefish"}, {"uid": "github/COMBINE-lab/RapMap", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/RapMap", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/RapMap"}, {"uid": "github/COMBINE-lab/libgff", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/libgff", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/libgff"}, {"uid": "github/COMBINE-lab/oarfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/oarfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/oarfish"}, {"uid": "github/COMBINE-lab/salmon", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/salmon", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/salmon"}, {"uid": "github/COMBINE-lab/pufferfish", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/pufferfish", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/pufferfish"}, {"uid": "github/COMBINE-lab/terminus", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/terminus", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/terminus"}, {"uid": "github/COMBINE-lab/simpleaf", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/simpleaf", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/simpleaf"}, {"uid": "github/COMBINE-lab/alevin-fry", "html_url": "https://rseng.github.io/software/repository/github/COMBINE-lab/alevin-fry", "api_url": "https://rseng.github.io/software/api/repos/github/COMBINE-lab/alevin-fry"}, {"uid": "github/acil-bwh/bayes_traj", "html_url": "https://rseng.github.io/software/repository/github/acil-bwh/bayes_traj", "api_url": "https://rseng.github.io/software/api/repos/github/acil-bwh/bayes_traj"}, {"uid": "github/soedinglab/spacepharer", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/spacepharer", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/spacepharer"}, {"uid": "github/soedinglab/hh-suite", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/hh-suite", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/hh-suite"}, {"uid": "github/soedinglab/metaeuk", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/metaeuk", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/metaeuk"}, {"uid": "github/soedinglab/MMseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/MMseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/MMseqs2"}, {"uid": "github/soedinglab/plass", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/plass", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/plass"}, {"uid": "github/soedinglab/mmseqs2", "html_url": "https://rseng.github.io/software/repository/github/soedinglab/mmseqs2", "api_url": "https://rseng.github.io/software/api/repos/github/soedinglab/mmseqs2"}, {"uid": "github/IRL2/nanover-server-py", "html_url": "https://rseng.github.io/software/repository/github/IRL2/nanover-server-py", "api_url": "https://rseng.github.io/software/api/repos/github/IRL2/nanover-server-py"}, {"uid": "github/dlakaplan/pulsarsurveyscraper", "html_url": "https://rseng.github.io/software/repository/github/dlakaplan/pulsarsurveyscraper", "api_url": "https://rseng.github.io/software/api/repos/github/dlakaplan/pulsarsurveyscraper"}, {"uid": "github/jadexter/grtrans", "html_url": "https://rseng.github.io/software/repository/github/jadexter/grtrans", "api_url": "https://rseng.github.io/software/api/repos/github/jadexter/grtrans"}, {"uid": "github/BritishGeologicalSurvey/pyvolcans", "html_url": "https://rseng.github.io/software/repository/github/BritishGeologicalSurvey/pyvolcans", "api_url": "https://rseng.github.io/software/api/repos/github/BritishGeologicalSurvey/pyvolcans"}, {"uid": "github/JulianZDing/UniMAP", "html_url": "https://rseng.github.io/software/repository/github/JulianZDing/UniMAP", "api_url": "https://rseng.github.io/software/api/repos/github/JulianZDing/UniMAP"}, {"uid": "github/srdc/onfhir", "html_url": "https://rseng.github.io/software/repository/github/srdc/onfhir", "api_url": "https://rseng.github.io/software/api/repos/github/srdc/onfhir"}, {"uid": "github/fedbiomed/fedbiomed", "html_url": "https://rseng.github.io/software/repository/github/fedbiomed/fedbiomed", "api_url": "https://rseng.github.io/software/api/repos/github/fedbiomed/fedbiomed"}, {"uid": "github/mauropieroni/fastpta", "html_url": "https://rseng.github.io/software/repository/github/mauropieroni/fastpta", "api_url": "https://rseng.github.io/software/api/repos/github/mauropieroni/fastpta"}, {"uid": "github/TRACER-LULab/Hyperelastics.jl", "html_url": "https://rseng.github.io/software/repository/github/TRACER-LULab/Hyperelastics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/TRACER-LULab/Hyperelastics.jl"}, {"uid": "github/mzemp/halogen", "html_url": "https://rseng.github.io/software/repository/github/mzemp/halogen", "api_url": "https://rseng.github.io/software/api/repos/github/mzemp/halogen"}, {"uid": "github/itsoulos/GlobalOptimus", "html_url": "https://rseng.github.io/software/repository/github/itsoulos/GlobalOptimus", "api_url": "https://rseng.github.io/software/api/repos/github/itsoulos/GlobalOptimus"}, {"uid": "github/agshumate/LiftoffTools", "html_url": "https://rseng.github.io/software/repository/github/agshumate/LiftoffTools", "api_url": "https://rseng.github.io/software/api/repos/github/agshumate/LiftoffTools"}, {"uid": "github/9505-PNNL/wmpy_power", "html_url": "https://rseng.github.io/software/repository/github/9505-PNNL/wmpy_power", "api_url": "https://rseng.github.io/software/api/repos/github/9505-PNNL/wmpy_power"}, {"uid": "github/MesquiteProject/MesquiteCore", "html_url": "https://rseng.github.io/software/repository/github/MesquiteProject/MesquiteCore", "api_url": "https://rseng.github.io/software/api/repos/github/MesquiteProject/MesquiteCore"}, {"uid": "github/chiaraherzog/WIDclocks", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/WIDclocks", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/WIDclocks"}, {"uid": "github/chiaraherzog/eutopsQC", "html_url": "https://rseng.github.io/software/repository/github/chiaraherzog/eutopsQC", "api_url": "https://rseng.github.io/software/api/repos/github/chiaraherzog/eutopsQC"}, {"uid": "github/zhoux85/scAdapt", "html_url": "https://rseng.github.io/software/repository/github/zhoux85/scAdapt", "api_url": "https://rseng.github.io/software/api/repos/github/zhoux85/scAdapt"}, {"uid": "github/kreshuklab/plant-seg", "html_url": "https://rseng.github.io/software/repository/github/kreshuklab/plant-seg", "api_url": "https://rseng.github.io/software/api/repos/github/kreshuklab/plant-seg"}, {"uid": "github/Mat-dp/mat-dp-core", "html_url": "https://rseng.github.io/software/repository/github/Mat-dp/mat-dp-core", "api_url": "https://rseng.github.io/software/api/repos/github/Mat-dp/mat-dp-core"}, {"uid": "github/ComplexGroupInteractions/xgi", "html_url": "https://rseng.github.io/software/repository/github/ComplexGroupInteractions/xgi", "api_url": "https://rseng.github.io/software/api/repos/github/ComplexGroupInteractions/xgi"}, {"uid": "github/MichaelSel/edoJS", "html_url": "https://rseng.github.io/software/repository/github/MichaelSel/edoJS", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelSel/edoJS"}, {"uid": "github/wpb-astro/MCSED", "html_url": "https://rseng.github.io/software/repository/github/wpb-astro/MCSED", "api_url": "https://rseng.github.io/software/api/repos/github/wpb-astro/MCSED"}, {"uid": "github/espnet/espnet", "html_url": "https://rseng.github.io/software/repository/github/espnet/espnet", "api_url": "https://rseng.github.io/software/api/repos/github/espnet/espnet"}, {"uid": "github/stefanofisc/dartvetter_apj", "html_url": "https://rseng.github.io/software/repository/github/stefanofisc/dartvetter_apj", "api_url": "https://rseng.github.io/software/api/repos/github/stefanofisc/dartvetter_apj"}, {"uid": "github/bio-phys/asyncmd", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/asyncmd", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/asyncmd"}, {"uid": "github/bio-phys/BioEn", "html_url": "https://rseng.github.io/software/repository/github/bio-phys/BioEn", "api_url": "https://rseng.github.io/software/api/repos/github/bio-phys/BioEn"}, {"uid": "github/MaceKuailv/seaduck", "html_url": "https://rseng.github.io/software/repository/github/MaceKuailv/seaduck", "api_url": "https://rseng.github.io/software/api/repos/github/MaceKuailv/seaduck"}, {"uid": "github/freemed/freeshim", "html_url": "https://rseng.github.io/software/repository/github/freemed/freeshim", "api_url": "https://rseng.github.io/software/api/repos/github/freemed/freeshim"}, {"uid": "github/D4san/MultiREx-public", "html_url": "https://rseng.github.io/software/repository/github/D4san/MultiREx-public", "api_url": "https://rseng.github.io/software/api/repos/github/D4san/MultiREx-public"}, {"uid": "github/hpparvi/MuSCAT2_transit_pipeline", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/MuSCAT2_transit_pipeline"}, {"uid": "github/hpparvi/spright", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/spright", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/spright"}, {"uid": "github/hpparvi/PyTransit", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/PyTransit", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/PyTransit"}, {"uid": "github/hpparvi/opents", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/opents", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/opents"}, {"uid": "github/hpparvi/ldtk", "html_url": "https://rseng.github.io/software/repository/github/hpparvi/ldtk", "api_url": "https://rseng.github.io/software/api/repos/github/hpparvi/ldtk"}, {"uid": "github/umami-hep/salt", "html_url": "https://rseng.github.io/software/repository/github/umami-hep/salt", "api_url": "https://rseng.github.io/software/api/repos/github/umami-hep/salt"}, {"uid": "github/trichter/yam", "html_url": "https://rseng.github.io/software/repository/github/trichter/yam", "api_url": "https://rseng.github.io/software/api/repos/github/trichter/yam"}, {"uid": "github/ivastar/clear", "html_url": "https://rseng.github.io/software/repository/github/ivastar/clear", "api_url": "https://rseng.github.io/software/api/repos/github/ivastar/clear"}, {"uid": "github/bio2byte/constava", "html_url": "https://rseng.github.io/software/repository/github/bio2byte/constava", "api_url": "https://rseng.github.io/software/api/repos/github/bio2byte/constava"}, {"uid": "github/INCF/one_click", "html_url": "https://rseng.github.io/software/repository/github/INCF/one_click", "api_url": "https://rseng.github.io/software/api/repos/github/INCF/one_click"}, {"uid": "github/hannorein/rebound", "html_url": "https://rseng.github.io/software/repository/github/hannorein/rebound", "api_url": "https://rseng.github.io/software/api/repos/github/hannorein/rebound"}, {"uid": "github/cersonsky-lab/AniSOAP", "html_url": "https://rseng.github.io/software/repository/github/cersonsky-lab/AniSOAP", "api_url": "https://rseng.github.io/software/api/repos/github/cersonsky-lab/AniSOAP"}, {"uid": "github/tofflemire/saphires", "html_url": "https://rseng.github.io/software/repository/github/tofflemire/saphires", "api_url": "https://rseng.github.io/software/api/repos/github/tofflemire/saphires"}, {"uid": "github/amkozlov/raxml-ng", "html_url": "https://rseng.github.io/software/repository/github/amkozlov/raxml-ng", "api_url": "https://rseng.github.io/software/api/repos/github/amkozlov/raxml-ng"}, {"uid": "github/samuelefiorini/tangle", "html_url": "https://rseng.github.io/software/repository/github/samuelefiorini/tangle", "api_url": "https://rseng.github.io/software/api/repos/github/samuelefiorini/tangle"}, {"uid": "github/oncoray/mirp", "html_url": "https://rseng.github.io/software/repository/github/oncoray/mirp", "api_url": "https://rseng.github.io/software/api/repos/github/oncoray/mirp"}, {"uid": "github/cbrueffer/tophat-recondition", "html_url": "https://rseng.github.io/software/repository/github/cbrueffer/tophat-recondition", "api_url": "https://rseng.github.io/software/api/repos/github/cbrueffer/tophat-recondition"}, {"uid": "github/heli-xu/findSVI", "html_url": "https://rseng.github.io/software/repository/github/heli-xu/findSVI", "api_url": "https://rseng.github.io/software/api/repos/github/heli-xu/findSVI"}, {"uid": "github/LucaJRossi/NIGO", "html_url": "https://rseng.github.io/software/repository/github/LucaJRossi/NIGO", "api_url": "https://rseng.github.io/software/api/repos/github/LucaJRossi/NIGO"}, {"uid": "github/ekg/freebayes", "html_url": "https://rseng.github.io/software/repository/github/ekg/freebayes", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/freebayes"}, {"uid": "github/ekg/fastahack", "html_url": "https://rseng.github.io/software/repository/github/ekg/fastahack", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/fastahack"}, {"uid": "github/ekg/smithwaterman", "html_url": "https://rseng.github.io/software/repository/github/ekg/smithwaterman", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/smithwaterman"}, {"uid": "github/ekg/seqwish", "html_url": "https://rseng.github.io/software/repository/github/ekg/seqwish", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/seqwish"}, {"uid": "github/ekg/tabixpp", "html_url": "https://rseng.github.io/software/repository/github/ekg/tabixpp", "api_url": "https://rseng.github.io/software/api/repos/github/ekg/tabixpp"}, {"uid": "github/ireis/PRF", "html_url": "https://rseng.github.io/software/repository/github/ireis/PRF", "api_url": "https://rseng.github.io/software/api/repos/github/ireis/PRF"}, {"uid": "github/hiddenSymmetries/simsopt", "html_url": "https://rseng.github.io/software/repository/github/hiddenSymmetries/simsopt", "api_url": "https://rseng.github.io/software/api/repos/github/hiddenSymmetries/simsopt"}, {"uid": "github/uit-cosmo/blobmodel", "html_url": "https://rseng.github.io/software/repository/github/uit-cosmo/blobmodel", "api_url": "https://rseng.github.io/software/api/repos/github/uit-cosmo/blobmodel"}, {"uid": "github/Clinical-Genomics-Umea/fraggler", "html_url": "https://rseng.github.io/software/repository/github/Clinical-Genomics-Umea/fraggler", "api_url": "https://rseng.github.io/software/api/repos/github/Clinical-Genomics-Umea/fraggler"}, {"uid": "github/zengzhenhuan/GFNet", "html_url": "https://rseng.github.io/software/repository/github/zengzhenhuan/GFNet", "api_url": "https://rseng.github.io/software/api/repos/github/zengzhenhuan/GFNet"}, {"uid": "github/jnktsj/DNApi", "html_url": "https://rseng.github.io/software/repository/github/jnktsj/DNApi", "api_url": "https://rseng.github.io/software/api/repos/github/jnktsj/DNApi"}, {"uid": "github/A-Davies/LensCNN", "html_url": "https://rseng.github.io/software/repository/github/A-Davies/LensCNN", "api_url": "https://rseng.github.io/software/api/repos/github/A-Davies/LensCNN"}, {"uid": "github/RECeSS-EU-Project/stanscofi", "html_url": "https://rseng.github.io/software/repository/github/RECeSS-EU-Project/stanscofi", "api_url": "https://rseng.github.io/software/api/repos/github/RECeSS-EU-Project/stanscofi"}, {"uid": "github/nluetts/NoisySignalIntegration.jl", "html_url": "https://rseng.github.io/software/repository/github/nluetts/NoisySignalIntegration.jl", "api_url": "https://rseng.github.io/software/api/repos/github/nluetts/NoisySignalIntegration.jl"}, {"uid": "github/nmfs-fish-tools/ssmse", "html_url": "https://rseng.github.io/software/repository/github/nmfs-fish-tools/ssmse", "api_url": "https://rseng.github.io/software/api/repos/github/nmfs-fish-tools/ssmse"}, {"uid": "github/ManuelBehrendt/Mera.jl", "html_url": "https://rseng.github.io/software/repository/github/ManuelBehrendt/Mera.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ManuelBehrendt/Mera.jl"}, {"uid": "github/jmejia8/Metaheuristics.jl", "html_url": "https://rseng.github.io/software/repository/github/jmejia8/Metaheuristics.jl", "api_url": "https://rseng.github.io/software/api/repos/github/jmejia8/Metaheuristics.jl"}, {"uid": "github/elwinter/nnde", "html_url": "https://rseng.github.io/software/repository/github/elwinter/nnde", "api_url": "https://rseng.github.io/software/api/repos/github/elwinter/nnde"}, {"uid": "github/jhkorhonen/MOODS", "html_url": "https://rseng.github.io/software/repository/github/jhkorhonen/MOODS", "api_url": "https://rseng.github.io/software/api/repos/github/jhkorhonen/MOODS"}, {"uid": "github/Shyentist/fish-r-man", "html_url": "https://rseng.github.io/software/repository/github/Shyentist/fish-r-man", "api_url": "https://rseng.github.io/software/api/repos/github/Shyentist/fish-r-man"}, {"uid": "github/Jacks0nJ/PyFPT", "html_url": "https://rseng.github.io/software/repository/github/Jacks0nJ/PyFPT", "api_url": "https://rseng.github.io/software/api/repos/github/Jacks0nJ/PyFPT"}, {"uid": "github/VincentAlcazer/StatAid", "html_url": "https://rseng.github.io/software/repository/github/VincentAlcazer/StatAid", "api_url": "https://rseng.github.io/software/api/repos/github/VincentAlcazer/StatAid"}, {"uid": "github/matiscke/lcps", "html_url": "https://rseng.github.io/software/repository/github/matiscke/lcps", "api_url": "https://rseng.github.io/software/api/repos/github/matiscke/lcps"}, {"uid": "github/jimmink/argslab", "html_url": "https://rseng.github.io/software/repository/github/jimmink/argslab", "api_url": "https://rseng.github.io/software/api/repos/github/jimmink/argslab"}, {"uid": "github/HadrienG/InSilicoSeq", "html_url": "https://rseng.github.io/software/repository/github/HadrienG/InSilicoSeq", "api_url": "https://rseng.github.io/software/api/repos/github/HadrienG/InSilicoSeq"}, {"uid": "github/geopandas/geopandas", "html_url": "https://rseng.github.io/software/repository/github/geopandas/geopandas", "api_url": "https://rseng.github.io/software/api/repos/github/geopandas/geopandas"}, {"uid": "github/henrikdvn/CRSocket", "html_url": "https://rseng.github.io/software/repository/github/henrikdvn/CRSocket", "api_url": "https://rseng.github.io/software/api/repos/github/henrikdvn/CRSocket"}, {"uid": "github/cthoyt/bel-resources", "html_url": "https://rseng.github.io/software/repository/github/cthoyt/bel-resources", "api_url": "https://rseng.github.io/software/api/repos/github/cthoyt/bel-resources"}, {"uid": "github/mbhall88/rasusa", "html_url": "https://rseng.github.io/software/repository/github/mbhall88/rasusa", "api_url": "https://rseng.github.io/software/api/repos/github/mbhall88/rasusa"}, {"uid": "github/jellis18/PTMCMCSampler", "html_url": "https://rseng.github.io/software/repository/github/jellis18/PTMCMCSampler", "api_url": "https://rseng.github.io/software/api/repos/github/jellis18/PTMCMCSampler"}, {"uid": "github/pydata/xarray", "html_url": "https://rseng.github.io/software/repository/github/pydata/xarray", "api_url": "https://rseng.github.io/software/api/repos/github/pydata/xarray"}, {"uid": "github/climate-machine/Oceananigans.jl", "html_url": "https://rseng.github.io/software/repository/github/climate-machine/Oceananigans.jl", "api_url": "https://rseng.github.io/software/api/repos/github/climate-machine/Oceananigans.jl"}, {"uid": "github/kinnala/scikit-fem", "html_url": "https://rseng.github.io/software/repository/github/kinnala/scikit-fem", "api_url": "https://rseng.github.io/software/api/repos/github/kinnala/scikit-fem"}, {"uid": "github/dgbowl/yadg", "html_url": "https://rseng.github.io/software/repository/github/dgbowl/yadg", "api_url": "https://rseng.github.io/software/api/repos/github/dgbowl/yadg"}, {"uid": "github/lzkelley/kalepy", "html_url": "https://rseng.github.io/software/repository/github/lzkelley/kalepy", "api_url": "https://rseng.github.io/software/api/repos/github/lzkelley/kalepy"}, {"uid": "github/LebeerLab/tidytacos", "html_url": "https://rseng.github.io/software/repository/github/LebeerLab/tidytacos", "api_url": "https://rseng.github.io/software/api/repos/github/LebeerLab/tidytacos"}, {"uid": "github/su2code/SU2", "html_url": "https://rseng.github.io/software/repository/github/su2code/SU2", "api_url": "https://rseng.github.io/software/api/repos/github/su2code/SU2"}, {"uid": "github/elnjensen/Tapir", "html_url": "https://rseng.github.io/software/repository/github/elnjensen/Tapir", "api_url": "https://rseng.github.io/software/api/repos/github/elnjensen/Tapir"}, {"uid": "github/martinjameswhite/directsht", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/directsht", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/directsht"}, {"uid": "github/martinjameswhite/ZeldovichRecon", "html_url": "https://rseng.github.io/software/repository/github/martinjameswhite/ZeldovichRecon", "api_url": "https://rseng.github.io/software/api/repos/github/martinjameswhite/ZeldovichRecon"}, {"uid": "github/herrsalmi/FConverter", "html_url": "https://rseng.github.io/software/repository/github/herrsalmi/FConverter", "api_url": "https://rseng.github.io/software/api/repos/github/herrsalmi/FConverter"}, {"uid": "github/josegit88/SCORPIO", "html_url": "https://rseng.github.io/software/repository/github/josegit88/SCORPIO", "api_url": "https://rseng.github.io/software/api/repos/github/josegit88/SCORPIO"}, {"uid": "github/astrosmili/smili", "html_url": "https://rseng.github.io/software/repository/github/astrosmili/smili", "api_url": "https://rseng.github.io/software/api/repos/github/astrosmili/smili"}, {"uid": "github/OSUDSL/pydre", "html_url": "https://rseng.github.io/software/repository/github/OSUDSL/pydre", "api_url": "https://rseng.github.io/software/api/repos/github/OSUDSL/pydre"}, {"uid": "github/Santiso-Group/despasito", "html_url": "https://rseng.github.io/software/repository/github/Santiso-Group/despasito", "api_url": "https://rseng.github.io/software/api/repos/github/Santiso-Group/despasito"}, {"uid": "github/VSPEC-collab/VSPEC", "html_url": "https://rseng.github.io/software/repository/github/VSPEC-collab/VSPEC", "api_url": "https://rseng.github.io/software/api/repos/github/VSPEC-collab/VSPEC"}, {"uid": "github/sarrvesh/cuFFS", "html_url": "https://rseng.github.io/software/repository/github/sarrvesh/cuFFS", "api_url": "https://rseng.github.io/software/api/repos/github/sarrvesh/cuFFS"}, {"uid": "github/cgrudz/DataAssimilationBenchmarks.jl", "html_url": "https://rseng.github.io/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", "api_url": "https://rseng.github.io/software/api/repos/github/cgrudz/DataAssimilationBenchmarks.jl"}, {"uid": "github/NathanSkene/MAGMA_Celltyping", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/MAGMA_Celltyping", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/MAGMA_Celltyping"}, {"uid": "github/NathanSkene/EWCE", "html_url": "https://rseng.github.io/software/repository/github/NathanSkene/EWCE", "api_url": "https://rseng.github.io/software/api/repos/github/NathanSkene/EWCE"}, {"uid": "github/ycwu1030/EvoEMD", "html_url": "https://rseng.github.io/software/repository/github/ycwu1030/EvoEMD", "api_url": "https://rseng.github.io/software/api/repos/github/ycwu1030/EvoEMD"}, {"uid": "github/LeonSong1995/gsMap", "html_url": "https://rseng.github.io/software/repository/github/LeonSong1995/gsMap", "api_url": "https://rseng.github.io/software/api/repos/github/LeonSong1995/gsMap"}, {"uid": "github/nlesc-ave/ave-rest-service", "html_url": "https://rseng.github.io/software/repository/github/nlesc-ave/ave-rest-service", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-ave/ave-rest-service"}, {"uid": "github/katholt/Kleborate", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kleborate", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kleborate"}, {"uid": "github/katholt/Kaptive", "html_url": "https://rseng.github.io/software/repository/github/katholt/Kaptive", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/Kaptive"}, {"uid": "github/katholt/srst2", "html_url": "https://rseng.github.io/software/repository/github/katholt/srst2", "api_url": "https://rseng.github.io/software/api/repos/github/katholt/srst2"}, {"uid": "github/morrowcj/remotePARTS", "html_url": "https://rseng.github.io/software/repository/github/morrowcj/remotePARTS", "api_url": "https://rseng.github.io/software/api/repos/github/morrowcj/remotePARTS"}, {"uid": "github/snijderlab/stitch", "html_url": "https://rseng.github.io/software/repository/github/snijderlab/stitch", "api_url": "https://rseng.github.io/software/api/repos/github/snijderlab/stitch"}, {"uid": "github/t00shadow/CryoDataBot", "html_url": "https://rseng.github.io/software/repository/github/t00shadow/CryoDataBot", "api_url": "https://rseng.github.io/software/api/repos/github/t00shadow/CryoDataBot"}, {"uid": "github/rkiman/wdwarfdate", "html_url": "https://rseng.github.io/software/repository/github/rkiman/wdwarfdate", "api_url": "https://rseng.github.io/software/api/repos/github/rkiman/wdwarfdate"}, {"uid": "github/igmhub/ForestFlow", "html_url": "https://rseng.github.io/software/repository/github/igmhub/ForestFlow", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/ForestFlow"}, {"uid": "github/igmhub/LyaCoLoRe", "html_url": "https://rseng.github.io/software/repository/github/igmhub/LyaCoLoRe", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/LyaCoLoRe"}, {"uid": "github/igmhub/baofit", "html_url": "https://rseng.github.io/software/repository/github/igmhub/baofit", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/baofit"}, {"uid": "github/igmhub/picca", "html_url": "https://rseng.github.io/software/repository/github/igmhub/picca", "api_url": "https://rseng.github.io/software/api/repos/github/igmhub/picca"}, {"uid": "github/geodynamics/burnman", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/burnman", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/burnman"}, {"uid": "github/geodynamics/Rayleigh", "html_url": "https://rseng.github.io/software/repository/github/geodynamics/Rayleigh", "api_url": "https://rseng.github.io/software/api/repos/github/geodynamics/Rayleigh"}, {"uid": "github/FINNGEN/lavaa-react", "html_url": "https://rseng.github.io/software/repository/github/FINNGEN/lavaa-react", "api_url": "https://rseng.github.io/software/api/repos/github/FINNGEN/lavaa-react"}, {"uid": "github/cmelab/flowerMD", "html_url": "https://rseng.github.io/software/repository/github/cmelab/flowerMD", "api_url": "https://rseng.github.io/software/api/repos/github/cmelab/flowerMD"}, {"uid": "github/deeptools/deepTools", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deepTools", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deepTools"}, {"uid": "github/deeptools/deeptools_intervals", "html_url": "https://rseng.github.io/software/repository/github/deeptools/deeptools_intervals", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/deeptools_intervals"}, {"uid": "github/deeptools/HiCExplorer", "html_url": "https://rseng.github.io/software/repository/github/deeptools/HiCExplorer", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/HiCExplorer"}, {"uid": "github/deeptools/py2bit", "html_url": "https://rseng.github.io/software/repository/github/deeptools/py2bit", "api_url": "https://rseng.github.io/software/api/repos/github/deeptools/py2bit"}, {"uid": "github/ElucidataInc/ElMaven", "html_url": "https://rseng.github.io/software/repository/github/ElucidataInc/ElMaven", "api_url": "https://rseng.github.io/software/api/repos/github/ElucidataInc/ElMaven"}, {"uid": "github/captain-exoplanet/misttborn", "html_url": "https://rseng.github.io/software/repository/github/captain-exoplanet/misttborn", "api_url": "https://rseng.github.io/software/api/repos/github/captain-exoplanet/misttborn"}, {"uid": "github/LucIJspeert/star_shadow", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/star_shadow", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/star_shadow"}, {"uid": "github/LucIJspeert/eclipsr", "html_url": "https://rseng.github.io/software/repository/github/LucIJspeert/eclipsr", "api_url": "https://rseng.github.io/software/api/repos/github/LucIJspeert/eclipsr"}, {"uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", "html_url": "https://rseng.github.io/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", "api_url": "https://rseng.github.io/software/api/repos/github/mengyao/Complete-Striped-Smith-Waterman-Library"}, {"uid": "github/EnergyModelsX/EnergyModelsBase.jl", "html_url": "https://rseng.github.io/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", "api_url": "https://rseng.github.io/software/api/repos/github/EnergyModelsX/EnergyModelsBase.jl"}, {"uid": "github/mastodon-sc/mastodon-deep-lineage", "html_url": "https://rseng.github.io/software/repository/github/mastodon-sc/mastodon-deep-lineage", "api_url": "https://rseng.github.io/software/api/repos/github/mastodon-sc/mastodon-deep-lineage"}, {"uid": "github/asalda/FiCUS", "html_url": "https://rseng.github.io/software/repository/github/asalda/FiCUS", "api_url": "https://rseng.github.io/software/api/repos/github/asalda/FiCUS"}, {"uid": "github/he2016012996/CABnet", "html_url": "https://rseng.github.io/software/repository/github/he2016012996/CABnet", "api_url": "https://rseng.github.io/software/api/repos/github/he2016012996/CABnet"}, {"uid": "github/gromacs/gromacs", "html_url": "https://rseng.github.io/software/repository/github/gromacs/gromacs", "api_url": "https://rseng.github.io/software/api/repos/github/gromacs/gromacs"}, {"uid": "github/philres/catfishq", "html_url": "https://rseng.github.io/software/repository/github/philres/catfishq", "api_url": "https://rseng.github.io/software/api/repos/github/philres/catfishq"}, {"uid": "github/philres/ngmlr", "html_url": "https://rseng.github.io/software/repository/github/philres/ngmlr", "api_url": "https://rseng.github.io/software/api/repos/github/philres/ngmlr"}, {"uid": "github/reedacartwright/ngila", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/ngila", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/ngila"}, {"uid": "github/reedacartwright/dawg", "html_url": "https://rseng.github.io/software/repository/github/reedacartwright/dawg", "api_url": "https://rseng.github.io/software/api/repos/github/reedacartwright/dawg"}, {"uid": "github/marccanby/linguiphyr", "html_url": "https://rseng.github.io/software/repository/github/marccanby/linguiphyr", "api_url": "https://rseng.github.io/software/api/repos/github/marccanby/linguiphyr"}, {"uid": "github/lgrcia/nuance", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/nuance", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/nuance"}, {"uid": "github/lgrcia/prose", "html_url": "https://rseng.github.io/software/repository/github/lgrcia/prose", "api_url": "https://rseng.github.io/software/api/repos/github/lgrcia/prose"}, {"uid": "github/gururajw/superlite", "html_url": "https://rseng.github.io/software/repository/github/gururajw/superlite", "api_url": "https://rseng.github.io/software/api/repos/github/gururajw/superlite"}, {"uid": "github/ExoArcturus/TriArc", "html_url": "https://rseng.github.io/software/repository/github/ExoArcturus/TriArc", "api_url": "https://rseng.github.io/software/api/repos/github/ExoArcturus/TriArc"}, {"uid": "github/DarkQuestCosmology/dark_emulator_public", "html_url": "https://rseng.github.io/software/repository/github/DarkQuestCosmology/dark_emulator_public", "api_url": "https://rseng.github.io/software/api/repos/github/DarkQuestCosmology/dark_emulator_public"}, {"uid": "github/synthpop-galaxy/synthpop", "html_url": "https://rseng.github.io/software/repository/github/synthpop-galaxy/synthpop", "api_url": "https://rseng.github.io/software/api/repos/github/synthpop-galaxy/synthpop"}, {"uid": "github/eead-csic-compbio/get_homologues", "html_url": "https://rseng.github.io/software/repository/github/eead-csic-compbio/get_homologues", "api_url": "https://rseng.github.io/software/api/repos/github/eead-csic-compbio/get_homologues"}, {"uid": "github/Bgi-LUSH/GPMeta", "html_url": "https://rseng.github.io/software/repository/github/Bgi-LUSH/GPMeta", "api_url": "https://rseng.github.io/software/api/repos/github/Bgi-LUSH/GPMeta"}, {"uid": "github/FergusDonnan/PyROA", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PyROA", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PyROA"}, {"uid": "github/FergusDonnan/Running-Optimal-Average", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/Running-Optimal-Average", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/Running-Optimal-Average"}, {"uid": "github/FergusDonnan/PAHDecomp", "html_url": "https://rseng.github.io/software/repository/github/FergusDonnan/PAHDecomp", "api_url": "https://rseng.github.io/software/api/repos/github/FergusDonnan/PAHDecomp"}, {"uid": "github/mithun218/GiNaCDE", "html_url": "https://rseng.github.io/software/repository/github/mithun218/GiNaCDE", "api_url": "https://rseng.github.io/software/api/repos/github/mithun218/GiNaCDE"}, {"uid": "github/eblur/dust", "html_url": "https://rseng.github.io/software/repository/github/eblur/dust", "api_url": "https://rseng.github.io/software/api/repos/github/eblur/dust"}, {"uid": "github/djbard/ccogs", "html_url": "https://rseng.github.io/software/repository/github/djbard/ccogs", "api_url": "https://rseng.github.io/software/api/repos/github/djbard/ccogs"}, {"uid": "github/Siegel-Lab/BioSmoother", "html_url": "https://rseng.github.io/software/repository/github/Siegel-Lab/BioSmoother", "api_url": "https://rseng.github.io/software/api/repos/github/Siegel-Lab/BioSmoother"}, {"uid": "github/ctian282/DeepSSM", "html_url": "https://rseng.github.io/software/repository/github/ctian282/DeepSSM", "api_url": "https://rseng.github.io/software/api/repos/github/ctian282/DeepSSM"}, {"uid": "github/Shamir-Lab/domino_web", "html_url": "https://rseng.github.io/software/repository/github/Shamir-Lab/domino_web", "api_url": "https://rseng.github.io/software/api/repos/github/Shamir-Lab/domino_web"}, {"uid": "github/UAMCAntwerpen/LEADD", "html_url": "https://rseng.github.io/software/repository/github/UAMCAntwerpen/LEADD", "api_url": "https://rseng.github.io/software/api/repos/github/UAMCAntwerpen/LEADD"}, {"uid": "github/grahambell/pymoc", "html_url": "https://rseng.github.io/software/repository/github/grahambell/pymoc", "api_url": "https://rseng.github.io/software/api/repos/github/grahambell/pymoc"}, {"uid": "github/TriPed-Robot/TriP", "html_url": "https://rseng.github.io/software/repository/github/TriPed-Robot/TriP", "api_url": "https://rseng.github.io/software/api/repos/github/TriPed-Robot/TriP"}, {"uid": "github/bihealth/sodar_core", "html_url": "https://rseng.github.io/software/repository/github/bihealth/sodar_core", "api_url": "https://rseng.github.io/software/api/repos/github/bihealth/sodar_core"}, {"uid": "github/simonsobs/mnms", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/mnms", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/mnms"}, {"uid": "github/simonsobs/so_noise_models", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/so_noise_models", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/so_noise_models"}, {"uid": "github/simonsobs/pixell", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/pixell", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/pixell"}, {"uid": "github/simonsobs/hmvec", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/hmvec", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/hmvec"}, {"uid": "github/simonsobs/nemo", "html_url": "https://rseng.github.io/software/repository/github/simonsobs/nemo", "api_url": "https://rseng.github.io/software/api/repos/github/simonsobs/nemo"}, {"uid": "github/Valdes-Tresanco-MS/NbThermo", "html_url": "https://rseng.github.io/software/repository/github/Valdes-Tresanco-MS/NbThermo", "api_url": "https://rseng.github.io/software/api/repos/github/Valdes-Tresanco-MS/NbThermo"}, {"uid": "github/collinlewin/STELA-Toolkit", "html_url": "https://rseng.github.io/software/repository/github/collinlewin/STELA-Toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/collinlewin/STELA-Toolkit"}, {"uid": "github/horvatovichlab/MSIWarp", "html_url": "https://rseng.github.io/software/repository/github/horvatovichlab/MSIWarp", "api_url": "https://rseng.github.io/software/api/repos/github/horvatovichlab/MSIWarp"}, {"uid": "github/AMReX-Astro/wdmerger", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/wdmerger", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/wdmerger"}, {"uid": "github/AMReX-Astro/Castro", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Castro", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Castro"}, {"uid": "github/AMReX-Astro/Nyx", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/Nyx", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/Nyx"}, {"uid": "github/AMReX-Astro/MAESTROeX", "html_url": "https://rseng.github.io/software/repository/github/AMReX-Astro/MAESTROeX", "api_url": "https://rseng.github.io/software/api/repos/github/AMReX-Astro/MAESTROeX"}, {"uid": "github/BackofenLab/StoatyDive", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/StoatyDive", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/StoatyDive"}, {"uid": "github/BackofenLab/IntaRNA", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/IntaRNA", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/IntaRNA"}, {"uid": "github/BackofenLab/Peakhood", "html_url": "https://rseng.github.io/software/repository/github/BackofenLab/Peakhood", "api_url": "https://rseng.github.io/software/api/repos/github/BackofenLab/Peakhood"}, {"uid": "github/nlesc/scriptcwl", "html_url": "https://rseng.github.io/software/repository/github/nlesc/scriptcwl", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/scriptcwl"}, {"uid": "github/nlesc/embodied-emotions-scripts", "html_url": "https://rseng.github.io/software/repository/github/nlesc/embodied-emotions-scripts", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc/embodied-emotions-scripts"}, {"uid": "github/julie-forman-kay-lab/SPyCi-PDB", "html_url": "https://rseng.github.io/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", "api_url": "https://rseng.github.io/software/api/repos/github/julie-forman-kay-lab/SPyCi-PDB"}, {"uid": "github/Lbalkenhol/candl", "html_url": "https://rseng.github.io/software/repository/github/Lbalkenhol/candl", "api_url": "https://rseng.github.io/software/api/repos/github/Lbalkenhol/candl"}, {"uid": "github/combustiontoolbox/combustion_toolbox", "html_url": "https://rseng.github.io/software/repository/github/combustiontoolbox/combustion_toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/combustiontoolbox/combustion_toolbox"}, {"uid": "github/Trovemaster/exocross", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/exocross", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/exocross"}, {"uid": "github/Trovemaster/Duo", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/Duo", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/Duo"}, {"uid": "github/Trovemaster/TROVE", "html_url": "https://rseng.github.io/software/repository/github/Trovemaster/TROVE", "api_url": "https://rseng.github.io/software/api/repos/github/Trovemaster/TROVE"}, {"uid": "github/spm/spm", "html_url": "https://rseng.github.io/software/repository/github/spm/spm", "api_url": "https://rseng.github.io/software/api/repos/github/spm/spm"}, {"uid": "github/UCD4IDS/WaveletsExt.jl", "html_url": "https://rseng.github.io/software/repository/github/UCD4IDS/WaveletsExt.jl", "api_url": "https://rseng.github.io/software/api/repos/github/UCD4IDS/WaveletsExt.jl"}, {"uid": "github/mzkhalid039/DWBuilder", "html_url": "https://rseng.github.io/software/repository/github/mzkhalid039/DWBuilder", "api_url": "https://rseng.github.io/software/api/repos/github/mzkhalid039/DWBuilder"}, {"uid": "github/fmichel/MaDKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/MaDKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/MaDKit"}, {"uid": "github/fmichel/TurtleKit", "html_url": "https://rseng.github.io/software/repository/github/fmichel/TurtleKit", "api_url": "https://rseng.github.io/software/api/repos/github/fmichel/TurtleKit"}, {"uid": "github/biswajitmb/DarpanX", "html_url": "https://rseng.github.io/software/repository/github/biswajitmb/DarpanX", "api_url": "https://rseng.github.io/software/api/repos/github/biswajitmb/DarpanX"}, {"uid": "github/JLBLine/WODEN", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/WODEN", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/WODEN"}, {"uid": "github/JLBLine/PUMA", "html_url": "https://rseng.github.io/software/repository/github/JLBLine/PUMA", "api_url": "https://rseng.github.io/software/api/repos/github/JLBLine/PUMA"}, {"uid": "github/bertrandplez/Turbospectrum_NLTE", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum_NLTE", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum_NLTE"}, {"uid": "github/bertrandplez/Turbospectrum2019", "html_url": "https://rseng.github.io/software/repository/github/bertrandplez/Turbospectrum2019", "api_url": "https://rseng.github.io/software/api/repos/github/bertrandplez/Turbospectrum2019"}, {"uid": "github/GoelandProver/Goeland", "html_url": "https://rseng.github.io/software/repository/github/GoelandProver/Goeland", "api_url": "https://rseng.github.io/software/api/repos/github/GoelandProver/Goeland"}, {"uid": "github/enthusi/feline", "html_url": "https://rseng.github.io/software/repository/github/enthusi/feline", "api_url": "https://rseng.github.io/software/api/repos/github/enthusi/feline"}, {"uid": "github/ADAH-EviDENce/evidence", "html_url": "https://rseng.github.io/software/repository/github/ADAH-EviDENce/evidence", "api_url": "https://rseng.github.io/software/api/repos/github/ADAH-EviDENce/evidence"}, {"uid": "github/orbisgis/lczexplore", "html_url": "https://rseng.github.io/software/repository/github/orbisgis/lczexplore", "api_url": "https://rseng.github.io/software/api/repos/github/orbisgis/lczexplore"}, {"uid": "github/MrMinimal64/multivar_horner", "html_url": "https://rseng.github.io/software/repository/github/MrMinimal64/multivar_horner", "api_url": "https://rseng.github.io/software/api/repos/github/MrMinimal64/multivar_horner"}, {"uid": "github/pedro-acunha/SHEEP", "html_url": "https://rseng.github.io/software/repository/github/pedro-acunha/SHEEP", "api_url": "https://rseng.github.io/software/api/repos/github/pedro-acunha/SHEEP"}, {"uid": "github/SuLab/Wikidata-phenomizer", "html_url": "https://rseng.github.io/software/repository/github/SuLab/Wikidata-phenomizer", "api_url": "https://rseng.github.io/software/api/repos/github/SuLab/Wikidata-phenomizer"}, {"uid": "github/j-faria/kima", "html_url": "https://rseng.github.io/software/repository/github/j-faria/kima", "api_url": "https://rseng.github.io/software/api/repos/github/j-faria/kima"}, {"uid": "github/cl3425/Clairvoyance", "html_url": "https://rseng.github.io/software/repository/github/cl3425/Clairvoyance", "api_url": "https://rseng.github.io/software/api/repos/github/cl3425/Clairvoyance"}, {"uid": "github/erhard-lab/gedi", "html_url": "https://rseng.github.io/software/repository/github/erhard-lab/gedi", "api_url": "https://rseng.github.io/software/api/repos/github/erhard-lab/gedi"}, {"uid": "github/EdwardBerman/shopt", "html_url": "https://rseng.github.io/software/repository/github/EdwardBerman/shopt", "api_url": "https://rseng.github.io/software/api/repos/github/EdwardBerman/shopt"}, {"uid": "github/KenethGarcia/ClassiPyGRB", "html_url": "https://rseng.github.io/software/repository/github/KenethGarcia/ClassiPyGRB", "api_url": "https://rseng.github.io/software/api/repos/github/KenethGarcia/ClassiPyGRB"}, {"uid": "github/keurfonluu/toughio", "html_url": "https://rseng.github.io/software/repository/github/keurfonluu/toughio", "api_url": "https://rseng.github.io/software/api/repos/github/keurfonluu/toughio"}, {"uid": "github/FabrizioMusacchio/MotilA", "html_url": "https://rseng.github.io/software/repository/github/FabrizioMusacchio/MotilA", "api_url": "https://rseng.github.io/software/api/repos/github/FabrizioMusacchio/MotilA"}, {"uid": "github/ClaraLage/Portfolio-Transition", "html_url": "https://rseng.github.io/software/repository/github/ClaraLage/Portfolio-Transition", "api_url": "https://rseng.github.io/software/api/repos/github/ClaraLage/Portfolio-Transition"}, {"uid": "github/INRS-France/predicting_alarm_audibility", "html_url": "https://rseng.github.io/software/repository/github/INRS-France/predicting_alarm_audibility", "api_url": "https://rseng.github.io/software/api/repos/github/INRS-France/predicting_alarm_audibility"}, {"uid": "github/dpseidel/stmove", "html_url": "https://rseng.github.io/software/repository/github/dpseidel/stmove", "api_url": "https://rseng.github.io/software/api/repos/github/dpseidel/stmove"}, {"uid": "github/tiberioap/grav_waldo", "html_url": "https://rseng.github.io/software/repository/github/tiberioap/grav_waldo", "api_url": "https://rseng.github.io/software/api/repos/github/tiberioap/grav_waldo"}, {"uid": "github/pierrehoudayer/RUBIS", "html_url": "https://rseng.github.io/software/repository/github/pierrehoudayer/RUBIS", "api_url": "https://rseng.github.io/software/api/repos/github/pierrehoudayer/RUBIS"}, {"uid": "github/DirectDM/directdm-py", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-py", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-py"}, {"uid": "github/DirectDM/directdm-mma", "html_url": "https://rseng.github.io/software/repository/github/DirectDM/directdm-mma", "api_url": "https://rseng.github.io/software/api/repos/github/DirectDM/directdm-mma"}, {"uid": "github/huchiayu/ParticleGridMapper.jl", "html_url": "https://rseng.github.io/software/repository/github/huchiayu/ParticleGridMapper.jl", "api_url": "https://rseng.github.io/software/api/repos/github/huchiayu/ParticleGridMapper.jl"}, {"uid": "github/wdpozzo/raynest", "html_url": "https://rseng.github.io/software/repository/github/wdpozzo/raynest", "api_url": "https://rseng.github.io/software/api/repos/github/wdpozzo/raynest"}, {"uid": "github/scikit-image/scikit-image", "html_url": "https://rseng.github.io/software/repository/github/scikit-image/scikit-image", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-image/scikit-image"}, {"uid": "github/plotly/dash", "html_url": "https://rseng.github.io/software/repository/github/plotly/dash", "api_url": "https://rseng.github.io/software/api/repos/github/plotly/dash"}, {"uid": "github/simd-everywhere/simde", "html_url": "https://rseng.github.io/software/repository/github/simd-everywhere/simde", "api_url": "https://rseng.github.io/software/api/repos/github/simd-everywhere/simde"}, {"uid": "github/EISy-as-Py/hardy", "html_url": "https://rseng.github.io/software/repository/github/EISy-as-Py/hardy", "api_url": "https://rseng.github.io/software/api/repos/github/EISy-as-Py/hardy"}, {"uid": "github/dsoave/JLS", "html_url": "https://rseng.github.io/software/repository/github/dsoave/JLS", "api_url": "https://rseng.github.io/software/api/repos/github/dsoave/JLS"}, {"uid": "github/microbioinformatic/Co-PATHOgenex", "html_url": "https://rseng.github.io/software/repository/github/microbioinformatic/Co-PATHOgenex", "api_url": "https://rseng.github.io/software/api/repos/github/microbioinformatic/Co-PATHOgenex"}, {"uid": "github/jboynyc/textnets", "html_url": "https://rseng.github.io/software/repository/github/jboynyc/textnets", "api_url": "https://rseng.github.io/software/api/repos/github/jboynyc/textnets"}, {"uid": "github/bokunoBike/m6AGE", "html_url": "https://rseng.github.io/software/repository/github/bokunoBike/m6AGE", "api_url": "https://rseng.github.io/software/api/repos/github/bokunoBike/m6AGE"}, {"uid": "github/lomereiter/sambamba", "html_url": "https://rseng.github.io/software/repository/github/lomereiter/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/lomereiter/sambamba"}, {"uid": "github/mpi4jax/mpi4jax", "html_url": "https://rseng.github.io/software/repository/github/mpi4jax/mpi4jax", "api_url": "https://rseng.github.io/software/api/repos/github/mpi4jax/mpi4jax"}, {"uid": "github/lu-yizhou/ClusterSeg", "html_url": "https://rseng.github.io/software/repository/github/lu-yizhou/ClusterSeg", "api_url": "https://rseng.github.io/software/api/repos/github/lu-yizhou/ClusterSeg"}, {"uid": "github/cc646201081/CircSI-SSL", "html_url": "https://rseng.github.io/software/repository/github/cc646201081/CircSI-SSL", "api_url": "https://rseng.github.io/software/api/repos/github/cc646201081/CircSI-SSL"}, {"uid": "github/davidgardenier/frbpoppy", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbpoppy", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbpoppy"}, {"uid": "github/davidgardenier/frbcat", "html_url": "https://rseng.github.io/software/repository/github/davidgardenier/frbcat", "api_url": "https://rseng.github.io/software/api/repos/github/davidgardenier/frbcat"}, {"uid": "github/locasto/libdisorder", "html_url": "https://rseng.github.io/software/repository/github/locasto/libdisorder", "api_url": "https://rseng.github.io/software/api/repos/github/locasto/libdisorder"}, {"uid": "github/dwkim78/upsilon", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/upsilon", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/upsilon"}, {"uid": "github/dwkim78/pdtrend", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/pdtrend", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/pdtrend"}, {"uid": "github/dwkim78/ASTRiDE", "html_url": "https://rseng.github.io/software/repository/github/dwkim78/ASTRiDE", "api_url": "https://rseng.github.io/software/api/repos/github/dwkim78/ASTRiDE"}, {"uid": "github/AnkitBarik/planetMagFields", "html_url": "https://rseng.github.io/software/repository/github/AnkitBarik/planetMagFields", "api_url": "https://rseng.github.io/software/api/repos/github/AnkitBarik/planetMagFields"}, {"uid": "github/JuliaOpt/JuMP.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaOpt/JuMP.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaOpt/JuMP.jl"}, {"uid": "github/steineggerlab/foldmason", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldmason", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldmason"}, {"uid": "github/steineggerlab/foldseek", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/foldseek", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/foldseek"}, {"uid": "github/steineggerlab/Metabuli", "html_url": "https://rseng.github.io/software/repository/github/steineggerlab/Metabuli", "api_url": "https://rseng.github.io/software/api/repos/github/steineggerlab/Metabuli"}, {"uid": "github/ydLiu-HIT/deSALT", "html_url": "https://rseng.github.io/software/repository/github/ydLiu-HIT/deSALT", "api_url": "https://rseng.github.io/software/api/repos/github/ydLiu-HIT/deSALT"}, {"uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "html_url": "https://rseng.github.io/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", "api_url": "https://rseng.github.io/software/api/repos/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework"}, {"uid": "github/conda-forge/conda-smithy", "html_url": "https://rseng.github.io/software/repository/github/conda-forge/conda-smithy", "api_url": "https://rseng.github.io/software/api/repos/github/conda-forge/conda-smithy"}, {"uid": "github/benopp99/DPMhalo", "html_url": "https://rseng.github.io/software/repository/github/benopp99/DPMhalo", "api_url": "https://rseng.github.io/software/api/repos/github/benopp99/DPMhalo"}, {"uid": "github/pvlib/pvlib-python", "html_url": "https://rseng.github.io/software/repository/github/pvlib/pvlib-python", "api_url": "https://rseng.github.io/software/api/repos/github/pvlib/pvlib-python"}, {"uid": "github/JFFleming/RCFV_Reader", "html_url": "https://rseng.github.io/software/repository/github/JFFleming/RCFV_Reader", "api_url": "https://rseng.github.io/software/api/repos/github/JFFleming/RCFV_Reader"}, {"uid": "github/TearsWaiting/MIMML", "html_url": "https://rseng.github.io/software/repository/github/TearsWaiting/MIMML", "api_url": "https://rseng.github.io/software/api/repos/github/TearsWaiting/MIMML"}, {"uid": "github/JASHunt/Snapdragons", "html_url": "https://rseng.github.io/software/repository/github/JASHunt/Snapdragons", "api_url": "https://rseng.github.io/software/api/repos/github/JASHunt/Snapdragons"}, {"uid": "github/archaeo-pteryx/PowerSpecCovFFT", "html_url": "https://rseng.github.io/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", "api_url": "https://rseng.github.io/software/api/repos/github/archaeo-pteryx/PowerSpecCovFFT"}, {"uid": "github/aewallin/allantools", "html_url": "https://rseng.github.io/software/repository/github/aewallin/allantools", "api_url": "https://rseng.github.io/software/api/repos/github/aewallin/allantools"}, {"uid": "github/jacobmerson/model-traits", "html_url": "https://rseng.github.io/software/repository/github/jacobmerson/model-traits", "api_url": "https://rseng.github.io/software/api/repos/github/jacobmerson/model-traits"}, {"uid": "github/Ashod/garli", "html_url": "https://rseng.github.io/software/repository/github/Ashod/garli", "api_url": "https://rseng.github.io/software/api/repos/github/Ashod/garli"}, {"uid": "github/wtraylor/modular_megafauna_model", "html_url": "https://rseng.github.io/software/repository/github/wtraylor/modular_megafauna_model", "api_url": "https://rseng.github.io/software/api/repos/github/wtraylor/modular_megafauna_model"}, {"uid": "github/EnsembleGovServices/kamodo-core", "html_url": "https://rseng.github.io/software/repository/github/EnsembleGovServices/kamodo-core", "api_url": "https://rseng.github.io/software/api/repos/github/EnsembleGovServices/kamodo-core"}, {"uid": "github/3top1a/biotools-linter", "html_url": "https://rseng.github.io/software/repository/github/3top1a/biotools-linter", "api_url": "https://rseng.github.io/software/api/repos/github/3top1a/biotools-linter"}, {"uid": "github/VasilyKokorev/stardust", "html_url": "https://rseng.github.io/software/repository/github/VasilyKokorev/stardust", "api_url": "https://rseng.github.io/software/api/repos/github/VasilyKokorev/stardust"}, {"uid": "github/RomainFeron/mwga-utils", "html_url": "https://rseng.github.io/software/repository/github/RomainFeron/mwga-utils", "api_url": "https://rseng.github.io/software/api/repos/github/RomainFeron/mwga-utils"}, {"uid": "github/karpov-sv/stdweb", "html_url": "https://rseng.github.io/software/repository/github/karpov-sv/stdweb", "api_url": "https://rseng.github.io/software/api/repos/github/karpov-sv/stdweb"}, {"uid": "github/edbiomedai/scmorph", "html_url": "https://rseng.github.io/software/repository/github/edbiomedai/scmorph", "api_url": "https://rseng.github.io/software/api/repos/github/edbiomedai/scmorph"}, {"uid": "github/riogroup/SORA", "html_url": "https://rseng.github.io/software/repository/github/riogroup/SORA", "api_url": "https://rseng.github.io/software/api/repos/github/riogroup/SORA"}, {"uid": "github/NBISweden/AGAT", "html_url": "https://rseng.github.io/software/repository/github/NBISweden/AGAT", "api_url": "https://rseng.github.io/software/api/repos/github/NBISweden/AGAT"}, {"uid": "github/ICSC-Spoke3/NP_TMcode", "html_url": "https://rseng.github.io/software/repository/github/ICSC-Spoke3/NP_TMcode", "api_url": "https://rseng.github.io/software/api/repos/github/ICSC-Spoke3/NP_TMcode"}, {"uid": "github/matthias-mayr/Cartesian-Impedance-Controller", "html_url": "https://rseng.github.io/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", "api_url": "https://rseng.github.io/software/api/repos/github/matthias-mayr/Cartesian-Impedance-Controller"}, {"uid": "github/GOBLIN-Proj/goblin_lite", "html_url": "https://rseng.github.io/software/repository/github/GOBLIN-Proj/goblin_lite", "api_url": "https://rseng.github.io/software/api/repos/github/GOBLIN-Proj/goblin_lite"}, {"uid": "github/lionandjelka/QhX1", "html_url": "https://rseng.github.io/software/repository/github/lionandjelka/QhX1", "api_url": "https://rseng.github.io/software/api/repos/github/lionandjelka/QhX1"}, {"uid": "github/tnakazato/priism", "html_url": "https://rseng.github.io/software/repository/github/tnakazato/priism", "api_url": "https://rseng.github.io/software/api/repos/github/tnakazato/priism"}, {"uid": "github/bowang-lab/scGPT", "html_url": "https://rseng.github.io/software/repository/github/bowang-lab/scGPT", "api_url": "https://rseng.github.io/software/api/repos/github/bowang-lab/scGPT"}, {"uid": "github/c-martinez/BeyondTheBook", "html_url": "https://rseng.github.io/software/repository/github/c-martinez/BeyondTheBook", "api_url": "https://rseng.github.io/software/api/repos/github/c-martinez/BeyondTheBook"}, {"uid": "github/ElsevierSoftwareX/SOFTX_2020_119", "html_url": "https://rseng.github.io/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", "api_url": "https://rseng.github.io/software/api/repos/github/ElsevierSoftwareX/SOFTX_2020_119"}, {"uid": "github/morisUtokyo/uTR", "html_url": "https://rseng.github.io/software/repository/github/morisUtokyo/uTR", "api_url": "https://rseng.github.io/software/api/repos/github/morisUtokyo/uTR"}, {"uid": "github/Mik3M4n/BaCoN", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/BaCoN", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/BaCoN"}, {"uid": "github/Mik3M4n/EF-TIGRE", "html_url": "https://rseng.github.io/software/repository/github/Mik3M4n/EF-TIGRE", "api_url": "https://rseng.github.io/software/api/repos/github/Mik3M4n/EF-TIGRE"}, {"uid": "github/tony-travis/PIQUE", "html_url": "https://rseng.github.io/software/repository/github/tony-travis/PIQUE", "api_url": "https://rseng.github.io/software/api/repos/github/tony-travis/PIQUE"}, {"uid": "github/dmitryduev/penquins", "html_url": "https://rseng.github.io/software/repository/github/dmitryduev/penquins", "api_url": "https://rseng.github.io/software/api/repos/github/dmitryduev/penquins"}, {"uid": "github/TeamCOMPAS/COMPAS", "html_url": "https://rseng.github.io/software/repository/github/TeamCOMPAS/COMPAS", "api_url": "https://rseng.github.io/software/api/repos/github/TeamCOMPAS/COMPAS"}, {"uid": "github/GeoffDuniam/FITS-Code-Examples", "html_url": "https://rseng.github.io/software/repository/github/GeoffDuniam/FITS-Code-Examples", "api_url": "https://rseng.github.io/software/api/repos/github/GeoffDuniam/FITS-Code-Examples"}, {"uid": "github/jpahlers/LASR", "html_url": "https://rseng.github.io/software/repository/github/jpahlers/LASR", "api_url": "https://rseng.github.io/software/api/repos/github/jpahlers/LASR"}, {"uid": "github/broadinstitute/wot", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/wot", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/wot"}, {"uid": "github/broadinstitute/tensorqtl", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/tensorqtl", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/tensorqtl"}, {"uid": "github/broadinstitute/picard", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/picard", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/picard"}, {"uid": "github/broadinstitute/Drop-seq", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/Drop-seq", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/Drop-seq"}, {"uid": "github/broadinstitute/CellBender", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/CellBender", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/CellBender"}, {"uid": "github/broadinstitute/gatk", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/gatk", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/gatk"}, {"uid": "github/broadinstitute/cromwell", "html_url": "https://rseng.github.io/software/repository/github/broadinstitute/cromwell", "api_url": "https://rseng.github.io/software/api/repos/github/broadinstitute/cromwell"}, {"uid": "github/pandas-dev/pandas", "html_url": "https://rseng.github.io/software/repository/github/pandas-dev/pandas", "api_url": "https://rseng.github.io/software/api/repos/github/pandas-dev/pandas"}, {"uid": "github/nf-core/mag", "html_url": "https://rseng.github.io/software/repository/github/nf-core/mag", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/mag"}, {"uid": "github/nf-core/proteinfamilies", "html_url": "https://rseng.github.io/software/repository/github/nf-core/proteinfamilies", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/proteinfamilies"}, {"uid": "github/nf-core/viralrecon", "html_url": "https://rseng.github.io/software/repository/github/nf-core/viralrecon", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/viralrecon"}, {"uid": "github/nf-core/airrflow", "html_url": "https://rseng.github.io/software/repository/github/nf-core/airrflow", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/airrflow"}, {"uid": "github/nf-core/sarek", "html_url": "https://rseng.github.io/software/repository/github/nf-core/sarek", "api_url": "https://rseng.github.io/software/api/repos/github/nf-core/sarek"}, {"uid": "github/lkmklsmn/DrivAER", "html_url": "https://rseng.github.io/software/repository/github/lkmklsmn/DrivAER", "api_url": "https://rseng.github.io/software/api/repos/github/lkmklsmn/DrivAER"}, {"uid": "github/RafiKueng/SpaghettiLens", "html_url": "https://rseng.github.io/software/repository/github/RafiKueng/SpaghettiLens", "api_url": "https://rseng.github.io/software/api/repos/github/RafiKueng/SpaghettiLens"}, {"uid": "github/nvnsudharsan/SOLWEIG-GPU", "html_url": "https://rseng.github.io/software/repository/github/nvnsudharsan/SOLWEIG-GPU", "api_url": "https://rseng.github.io/software/api/repos/github/nvnsudharsan/SOLWEIG-GPU"}, {"uid": "github/dsheward-astro/pynaple", "html_url": "https://rseng.github.io/software/repository/github/dsheward-astro/pynaple", "api_url": "https://rseng.github.io/software/api/repos/github/dsheward-astro/pynaple"}, {"uid": "github/cnsetzer/kilopop", "html_url": "https://rseng.github.io/software/repository/github/cnsetzer/kilopop", "api_url": "https://rseng.github.io/software/api/repos/github/cnsetzer/kilopop"}, {"uid": "github/EddyRivasLab/infernal", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/infernal", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/infernal"}, {"uid": "github/EddyRivasLab/hmmer", "html_url": "https://rseng.github.io/software/repository/github/EddyRivasLab/hmmer", "api_url": "https://rseng.github.io/software/api/repos/github/EddyRivasLab/hmmer"}, {"uid": "github/4dn-dcic/pairix", "html_url": "https://rseng.github.io/software/repository/github/4dn-dcic/pairix", "api_url": "https://rseng.github.io/software/api/repos/github/4dn-dcic/pairix"}, {"uid": "github/phylo42/RAPPAS", "html_url": "https://rseng.github.io/software/repository/github/phylo42/RAPPAS", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/RAPPAS"}, {"uid": "github/phylo42/EPIK", "html_url": "https://rseng.github.io/software/repository/github/phylo42/EPIK", "api_url": "https://rseng.github.io/software/api/repos/github/phylo42/EPIK"}, {"uid": "github/LukeDuttweiler/skipTrack", "html_url": "https://rseng.github.io/software/repository/github/LukeDuttweiler/skipTrack", "api_url": "https://rseng.github.io/software/api/repos/github/LukeDuttweiler/skipTrack"}, {"uid": "github/phpuech/OT_Analysis", "html_url": "https://rseng.github.io/software/repository/github/phpuech/OT_Analysis", "api_url": "https://rseng.github.io/software/api/repos/github/phpuech/OT_Analysis"}, {"uid": "github/jeremiah-corrado/fem_2d", "html_url": "https://rseng.github.io/software/repository/github/jeremiah-corrado/fem_2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeremiah-corrado/fem_2d"}, {"uid": "github/noatgnu/catapult", "html_url": "https://rseng.github.io/software/repository/github/noatgnu/catapult", "api_url": "https://rseng.github.io/software/api/repos/github/noatgnu/catapult"}, {"uid": "github/oleksulkowski/Syn-CpG-Spacer", "html_url": "https://rseng.github.io/software/repository/github/oleksulkowski/Syn-CpG-Spacer", "api_url": "https://rseng.github.io/software/api/repos/github/oleksulkowski/Syn-CpG-Spacer"}, {"uid": "github/mortonne/psifr", "html_url": "https://rseng.github.io/software/repository/github/mortonne/psifr", "api_url": "https://rseng.github.io/software/api/repos/github/mortonne/psifr"}, {"uid": "github/mwhosek/extlaw_H18", "html_url": "https://rseng.github.io/software/repository/github/mwhosek/extlaw_H18", "api_url": "https://rseng.github.io/software/api/repos/github/mwhosek/extlaw_H18"}, {"uid": "github/SNOwGLoBES/snowglobes", "html_url": "https://rseng.github.io/software/repository/github/SNOwGLoBES/snowglobes", "api_url": "https://rseng.github.io/software/api/repos/github/SNOwGLoBES/snowglobes"}, {"uid": "github/UBC-Astrophysics/kd-match", "html_url": "https://rseng.github.io/software/repository/github/UBC-Astrophysics/kd-match", "api_url": "https://rseng.github.io/software/api/repos/github/UBC-Astrophysics/kd-match"}, {"uid": "github/pierrepeterlongo/back_to_sequences", "html_url": "https://rseng.github.io/software/repository/github/pierrepeterlongo/back_to_sequences", "api_url": "https://rseng.github.io/software/api/repos/github/pierrepeterlongo/back_to_sequences"}, {"uid": "github/loneknightpy/idba", "html_url": "https://rseng.github.io/software/repository/github/loneknightpy/idba", "api_url": "https://rseng.github.io/software/api/repos/github/loneknightpy/idba"}, {"uid": "github/TomWagg/cogsworth", "html_url": "https://rseng.github.io/software/repository/github/TomWagg/cogsworth", "api_url": "https://rseng.github.io/software/api/repos/github/TomWagg/cogsworth"}, {"uid": "github/sndik16/GAMA_quasarhosts_starformation", "html_url": "https://rseng.github.io/software/repository/github/sndik16/GAMA_quasarhosts_starformation", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/GAMA_quasarhosts_starformation"}, {"uid": "github/sndik16/SFR_ChebyFit_example", "html_url": "https://rseng.github.io/software/repository/github/sndik16/SFR_ChebyFit_example", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/SFR_ChebyFit_example"}, {"uid": "github/sndik16/light-GG", "html_url": "https://rseng.github.io/software/repository/github/sndik16/light-GG", "api_url": "https://rseng.github.io/software/api/repos/github/sndik16/light-GG"}, {"uid": "github/OttoStruve/muler", "html_url": "https://rseng.github.io/software/repository/github/OttoStruve/muler", "api_url": "https://rseng.github.io/software/api/repos/github/OttoStruve/muler"}, {"uid": "github/saphir746/BiobankRead-Bash", "html_url": "https://rseng.github.io/software/repository/github/saphir746/BiobankRead-Bash", "api_url": "https://rseng.github.io/software/api/repos/github/saphir746/BiobankRead-Bash"}, {"uid": "github/vcflib/bio-vcf", "html_url": "https://rseng.github.io/software/repository/github/vcflib/bio-vcf", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/bio-vcf"}, {"uid": "github/vcflib/vcflib", "html_url": "https://rseng.github.io/software/repository/github/vcflib/vcflib", "api_url": "https://rseng.github.io/software/api/repos/github/vcflib/vcflib"}, {"uid": "github/danielhuson/malt", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/malt", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/malt"}, {"uid": "github/danielhuson/dendroscope3", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/dendroscope3", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/dendroscope3"}, {"uid": "github/danielhuson/jloda", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/jloda", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/jloda"}, {"uid": "github/danielhuson/megan-ce", "html_url": "https://rseng.github.io/software/repository/github/danielhuson/megan-ce", "api_url": "https://rseng.github.io/software/api/repos/github/danielhuson/megan-ce"}, {"uid": "github/jbuisine/macop", "html_url": "https://rseng.github.io/software/repository/github/jbuisine/macop", "api_url": "https://rseng.github.io/software/api/repos/github/jbuisine/macop"}, {"uid": "github/mib-unitn/SoFT", "html_url": "https://rseng.github.io/software/repository/github/mib-unitn/SoFT", "api_url": "https://rseng.github.io/software/api/repos/github/mib-unitn/SoFT"}, {"uid": "github/clemson-cal/sailfish", "html_url": "https://rseng.github.io/software/repository/github/clemson-cal/sailfish", "api_url": "https://rseng.github.io/software/api/repos/github/clemson-cal/sailfish"}, {"uid": "github/moead-framework/framework", "html_url": "https://rseng.github.io/software/repository/github/moead-framework/framework", "api_url": "https://rseng.github.io/software/api/repos/github/moead-framework/framework"}, {"uid": "github/IMB-Computational-Genomics-Lab/scGPS", "html_url": "https://rseng.github.io/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", "api_url": "https://rseng.github.io/software/api/repos/github/IMB-Computational-Genomics-Lab/scGPS"}, {"uid": "github/gotsunami/Youpi", "html_url": "https://rseng.github.io/software/repository/github/gotsunami/Youpi", "api_url": "https://rseng.github.io/software/api/repos/github/gotsunami/Youpi"}, {"uid": "github/MorgansLab/OSCILOS_Long", "html_url": "https://rseng.github.io/software/repository/github/MorgansLab/OSCILOS_Long", "api_url": "https://rseng.github.io/software/api/repos/github/MorgansLab/OSCILOS_Long"}, {"uid": "github/ruizengalways/FOD-Net", "html_url": "https://rseng.github.io/software/repository/github/ruizengalways/FOD-Net", "api_url": "https://rseng.github.io/software/api/repos/github/ruizengalways/FOD-Net"}, {"uid": "github/astroumd/miriad", "html_url": "https://rseng.github.io/software/repository/github/astroumd/miriad", "api_url": "https://rseng.github.io/software/api/repos/github/astroumd/miriad"}, {"uid": "github/antoinediez/Sisyphe", "html_url": "https://rseng.github.io/software/repository/github/antoinediez/Sisyphe", "api_url": "https://rseng.github.io/software/api/repos/github/antoinediez/Sisyphe"}, {"uid": "github/CIbiv/guaCAMOLE", "html_url": "https://rseng.github.io/software/repository/github/CIbiv/guaCAMOLE", "api_url": "https://rseng.github.io/software/api/repos/github/CIbiv/guaCAMOLE"}, {"uid": "github/jcolinhill/pyilc", "html_url": "https://rseng.github.io/software/repository/github/jcolinhill/pyilc", "api_url": "https://rseng.github.io/software/api/repos/github/jcolinhill/pyilc"}, {"uid": "github/geckos-survey/ngist", "html_url": "https://rseng.github.io/software/repository/github/geckos-survey/ngist", "api_url": "https://rseng.github.io/software/api/repos/github/geckos-survey/ngist"}, {"uid": "github/aris-mav/NMRInversions.jl", "html_url": "https://rseng.github.io/software/repository/github/aris-mav/NMRInversions.jl", "api_url": "https://rseng.github.io/software/api/repos/github/aris-mav/NMRInversions.jl"}, {"uid": "github/ebachelet/pyLIMA", "html_url": "https://rseng.github.io/software/repository/github/ebachelet/pyLIMA", "api_url": "https://rseng.github.io/software/api/repos/github/ebachelet/pyLIMA"}, {"uid": "github/lehtiolab/msstitch", "html_url": "https://rseng.github.io/software/repository/github/lehtiolab/msstitch", "api_url": "https://rseng.github.io/software/api/repos/github/lehtiolab/msstitch"}, {"uid": "github/sebastien-plutniak/archeofrag", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeofrag", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeofrag"}, {"uid": "github/sebastien-plutniak/archeoviz", "html_url": "https://rseng.github.io/software/repository/github/sebastien-plutniak/archeoviz", "api_url": "https://rseng.github.io/software/api/repos/github/sebastien-plutniak/archeoviz"}, {"uid": "github/relipmoc/skewer", "html_url": "https://rseng.github.io/software/repository/github/relipmoc/skewer", "api_url": "https://rseng.github.io/software/api/repos/github/relipmoc/skewer"}, {"uid": "github/felipeelorrieta/IAR_Model", "html_url": "https://rseng.github.io/software/repository/github/felipeelorrieta/IAR_Model", "api_url": "https://rseng.github.io/software/api/repos/github/felipeelorrieta/IAR_Model"}, {"uid": "github/qcxms/QCxMS", "html_url": "https://rseng.github.io/software/repository/github/qcxms/QCxMS", "api_url": "https://rseng.github.io/software/api/repos/github/qcxms/QCxMS"}, {"uid": "github/xiaziyna/PyStarshade", "html_url": "https://rseng.github.io/software/repository/github/xiaziyna/PyStarshade", "api_url": "https://rseng.github.io/software/api/repos/github/xiaziyna/PyStarshade"}, {"uid": "github/Bios4Biol/intronSeeker", "html_url": "https://rseng.github.io/software/repository/github/Bios4Biol/intronSeeker", "api_url": "https://rseng.github.io/software/api/repos/github/Bios4Biol/intronSeeker"}, {"uid": "github/AngryMaciek/hypercomplex", "html_url": "https://rseng.github.io/software/repository/github/AngryMaciek/hypercomplex", "api_url": "https://rseng.github.io/software/api/repos/github/AngryMaciek/hypercomplex"}, {"uid": "github/m-dadej/MarSwitching.jl", "html_url": "https://rseng.github.io/software/repository/github/m-dadej/MarSwitching.jl", "api_url": "https://rseng.github.io/software/api/repos/github/m-dadej/MarSwitching.jl"}, {"uid": "github/MrOlm/drep", "html_url": "https://rseng.github.io/software/repository/github/MrOlm/drep", "api_url": "https://rseng.github.io/software/api/repos/github/MrOlm/drep"}, {"uid": "github/bodulic/CATS-rb", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rb", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rb"}, {"uid": "github/bodulic/CATS-rf", "html_url": "https://rseng.github.io/software/repository/github/bodulic/CATS-rf", "api_url": "https://rseng.github.io/software/api/repos/github/bodulic/CATS-rf"}, {"uid": "github/weiliu123/PCLassoReg", "html_url": "https://rseng.github.io/software/repository/github/weiliu123/PCLassoReg", "api_url": "https://rseng.github.io/software/api/repos/github/weiliu123/PCLassoReg"}, {"uid": "github/OpenMD/OpenMD", "html_url": "https://rseng.github.io/software/repository/github/OpenMD/OpenMD", "api_url": "https://rseng.github.io/software/api/repos/github/OpenMD/OpenMD"}, {"uid": "github/Nicholaswogan/PhotochemPy", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/PhotochemPy", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/PhotochemPy"}, {"uid": "github/Nicholaswogan/photochem", "html_url": "https://rseng.github.io/software/repository/github/Nicholaswogan/photochem", "api_url": "https://rseng.github.io/software/api/repos/github/Nicholaswogan/photochem"}, {"uid": "github/onnela-lab/beiwe-backend", "html_url": "https://rseng.github.io/software/repository/github/onnela-lab/beiwe-backend", "api_url": "https://rseng.github.io/software/api/repos/github/onnela-lab/beiwe-backend"}, {"uid": "github/ICRAR/libprofit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/libprofit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/libprofit"}, {"uid": "github/ICRAR/shark", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/shark", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/shark"}, {"uid": "github/ICRAR/ProFit", "html_url": "https://rseng.github.io/software/repository/github/ICRAR/ProFit", "api_url": "https://rseng.github.io/software/api/repos/github/ICRAR/ProFit"}, {"uid": "github/cov-lineages/pangoLEARN", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangoLEARN", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangoLEARN"}, {"uid": "github/cov-lineages/pangolin", "html_url": "https://rseng.github.io/software/repository/github/cov-lineages/pangolin", "api_url": "https://rseng.github.io/software/api/repos/github/cov-lineages/pangolin"}, {"uid": "github/shbhuk/barycorrpy", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/barycorrpy", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/barycorrpy"}, {"uid": "github/shbhuk/mrexo", "html_url": "https://rseng.github.io/software/repository/github/shbhuk/mrexo", "api_url": "https://rseng.github.io/software/api/repos/github/shbhuk/mrexo"}, {"uid": "github/firedrakeproject/checkpoint_schedules", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/checkpoint_schedules", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/checkpoint_schedules"}, {"uid": "github/firedrakeproject/gusto", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/gusto", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/gusto"}, {"uid": "github/firedrakeproject/firedrake", "html_url": "https://rseng.github.io/software/repository/github/firedrakeproject/firedrake", "api_url": "https://rseng.github.io/software/api/repos/github/firedrakeproject/firedrake"}, {"uid": "github/linnarsson-lab/loompy", "html_url": "https://rseng.github.io/software/repository/github/linnarsson-lab/loompy", "api_url": "https://rseng.github.io/software/api/repos/github/linnarsson-lab/loompy"}, {"uid": "github/iopenshell/ezSpectrum", "html_url": "https://rseng.github.io/software/repository/github/iopenshell/ezSpectrum", "api_url": "https://rseng.github.io/software/api/repos/github/iopenshell/ezSpectrum"}, {"uid": "github/raddleverse/MimiBRICK.jl", "html_url": "https://rseng.github.io/software/repository/github/raddleverse/MimiBRICK.jl", "api_url": "https://rseng.github.io/software/api/repos/github/raddleverse/MimiBRICK.jl"}, {"uid": "github/liuhong-jia/scAnno", "html_url": "https://rseng.github.io/software/repository/github/liuhong-jia/scAnno", "api_url": "https://rseng.github.io/software/api/repos/github/liuhong-jia/scAnno"}, {"uid": "github/esquivas/guacho", "html_url": "https://rseng.github.io/software/repository/github/esquivas/guacho", "api_url": "https://rseng.github.io/software/api/repos/github/esquivas/guacho"}, {"uid": "github/sourmash-bio/sourmash", "html_url": "https://rseng.github.io/software/repository/github/sourmash-bio/sourmash", "api_url": "https://rseng.github.io/software/api/repos/github/sourmash-bio/sourmash"}, {"uid": "github/amromics/panta", "html_url": "https://rseng.github.io/software/repository/github/amromics/panta", "api_url": "https://rseng.github.io/software/api/repos/github/amromics/panta"}, {"uid": "github/annayqho/TheCannon", "html_url": "https://rseng.github.io/software/repository/github/annayqho/TheCannon", "api_url": "https://rseng.github.io/software/api/repos/github/annayqho/TheCannon"}, {"uid": "github/GOALS-survey/CAFE", "html_url": "https://rseng.github.io/software/repository/github/GOALS-survey/CAFE", "api_url": "https://rseng.github.io/software/api/repos/github/GOALS-survey/CAFE"}, {"uid": "github/ni1o1/transbigdata", "html_url": "https://rseng.github.io/software/repository/github/ni1o1/transbigdata", "api_url": "https://rseng.github.io/software/api/repos/github/ni1o1/transbigdata"}, {"uid": "github/Gabaldonlab/crossmapper", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/crossmapper", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/crossmapper"}, {"uid": "github/Gabaldonlab/karyon", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/karyon", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/karyon"}, {"uid": "github/Gabaldonlab/perSVade", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/perSVade", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/perSVade"}, {"uid": "github/Gabaldonlab/jloh", "html_url": "https://rseng.github.io/software/repository/github/Gabaldonlab/jloh", "api_url": "https://rseng.github.io/software/api/repos/github/Gabaldonlab/jloh"}, {"uid": "github/ihmwg/python-modelcif", "html_url": "https://rseng.github.io/software/repository/github/ihmwg/python-modelcif", "api_url": "https://rseng.github.io/software/api/repos/github/ihmwg/python-modelcif"}, {"uid": "github/Battery-Intelligence-Lab/dtw-cpp", "html_url": "https://rseng.github.io/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", "api_url": "https://rseng.github.io/software/api/repos/github/Battery-Intelligence-Lab/dtw-cpp"}, {"uid": "github/ugovaretto/molekel", "html_url": "https://rseng.github.io/software/repository/github/ugovaretto/molekel", "api_url": "https://rseng.github.io/software/api/repos/github/ugovaretto/molekel"}, {"uid": "github/egjergo/galcem", "html_url": "https://rseng.github.io/software/repository/github/egjergo/galcem", "api_url": "https://rseng.github.io/software/api/repos/github/egjergo/galcem"}, {"uid": "github/radio-astro-tools/spectral-cube", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/spectral-cube", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/spectral-cube"}, {"uid": "github/radio-astro-tools/pvextractor", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/pvextractor", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/pvextractor"}, {"uid": "github/radio-astro-tools/uvcombine", "html_url": "https://rseng.github.io/software/repository/github/radio-astro-tools/uvcombine", "api_url": "https://rseng.github.io/software/api/repos/github/radio-astro-tools/uvcombine"}, {"uid": "github/akashdhruv/BoxKit", "html_url": "https://rseng.github.io/software/repository/github/akashdhruv/BoxKit", "api_url": "https://rseng.github.io/software/api/repos/github/akashdhruv/BoxKit"}, {"uid": "github/oskarhs/AutoHist.jl", "html_url": "https://rseng.github.io/software/repository/github/oskarhs/AutoHist.jl", "api_url": "https://rseng.github.io/software/api/repos/github/oskarhs/AutoHist.jl"}, {"uid": "github/r-lib/gert", "html_url": "https://rseng.github.io/software/repository/github/r-lib/gert", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/gert"}, {"uid": "github/r-lib/credentials", "html_url": "https://rseng.github.io/software/repository/github/r-lib/credentials", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/credentials"}, {"uid": "github/r-lib/lintr", "html_url": "https://rseng.github.io/software/repository/github/r-lib/lintr", "api_url": "https://rseng.github.io/software/api/repos/github/r-lib/lintr"}, {"uid": "github/genotoul-bioinfo/Binette", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/Binette", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/Binette"}, {"uid": "github/genotoul-bioinfo/dgenies", "html_url": "https://rseng.github.io/software/repository/github/genotoul-bioinfo/dgenies", "api_url": "https://rseng.github.io/software/api/repos/github/genotoul-bioinfo/dgenies"}, {"uid": "github/pawni/BayesByHypernet", "html_url": "https://rseng.github.io/software/repository/github/pawni/BayesByHypernet", "api_url": "https://rseng.github.io/software/api/repos/github/pawni/BayesByHypernet"}, {"uid": "github/mlysy/LocalCop", "html_url": "https://rseng.github.io/software/repository/github/mlysy/LocalCop", "api_url": "https://rseng.github.io/software/api/repos/github/mlysy/LocalCop"}, {"uid": "github/mpeel/fastcc", "html_url": "https://rseng.github.io/software/repository/github/mpeel/fastcc", "api_url": "https://rseng.github.io/software/api/repos/github/mpeel/fastcc"}, {"uid": "github/spacetelescope/synphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/synphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/synphot_refactor"}, {"uid": "github/spacetelescope/hst_cosmic_rays", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/hst_cosmic_rays", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/hst_cosmic_rays"}, {"uid": "github/spacetelescope/stsynphot_refactor", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsynphot_refactor", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsynphot_refactor"}, {"uid": "github/spacetelescope/spaceKLIP", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/spaceKLIP", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/spaceKLIP"}, {"uid": "github/spacetelescope/astronify", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/astronify", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/astronify"}, {"uid": "github/spacetelescope/specview", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specview", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specview"}, {"uid": "github/spacetelescope/pystortion", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/pystortion", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/pystortion"}, {"uid": "github/spacetelescope/imexam", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/imexam", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/imexam"}, {"uid": "github/spacetelescope/specviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/specviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/specviz"}, {"uid": "github/spacetelescope/jdaviz", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/jdaviz", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/jdaviz"}, {"uid": "github/spacetelescope/exovetter", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/exovetter", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/exovetter"}, {"uid": "github/spacetelescope/stsdas_stripped", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stsdas_stripped", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stsdas_stripped"}, {"uid": "github/spacetelescope/stginga", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/stginga", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/stginga"}, {"uid": "github/spacetelescope/mirage", "html_url": "https://rseng.github.io/software/repository/github/spacetelescope/mirage", "api_url": "https://rseng.github.io/software/api/repos/github/spacetelescope/mirage"}, {"uid": "github/YihanWangAstro/SpaceHub", "html_url": "https://rseng.github.io/software/repository/github/YihanWangAstro/SpaceHub", "api_url": "https://rseng.github.io/software/api/repos/github/YihanWangAstro/SpaceHub"}, {"uid": "github/vitor-de-oliveira/rheovolution", "html_url": "https://rseng.github.io/software/repository/github/vitor-de-oliveira/rheovolution", "api_url": "https://rseng.github.io/software/api/repos/github/vitor-de-oliveira/rheovolution"}, {"uid": "github/jiahecui/SenAOReFoc", "html_url": "https://rseng.github.io/software/repository/github/jiahecui/SenAOReFoc", "api_url": "https://rseng.github.io/software/api/repos/github/jiahecui/SenAOReFoc"}, {"uid": "github/zhanglabtools/CASAVA", "html_url": "https://rseng.github.io/software/repository/github/zhanglabtools/CASAVA", "api_url": "https://rseng.github.io/software/api/repos/github/zhanglabtools/CASAVA"}, {"uid": "github/astro-seanwhy/ExoInt", "html_url": "https://rseng.github.io/software/repository/github/astro-seanwhy/ExoInt", "api_url": "https://rseng.github.io/software/api/repos/github/astro-seanwhy/ExoInt"}, {"uid": "github/CIRADA-Tools/RM-Tools", "html_url": "https://rseng.github.io/software/repository/github/CIRADA-Tools/RM-Tools", "api_url": "https://rseng.github.io/software/api/repos/github/CIRADA-Tools/RM-Tools"}, {"uid": "github/spectrapepper/spectrapepper", "html_url": "https://rseng.github.io/software/repository/github/spectrapepper/spectrapepper", "api_url": "https://rseng.github.io/software/api/repos/github/spectrapepper/spectrapepper"}, {"uid": "github/JoeMcEwen/FAST-PT", "html_url": "https://rseng.github.io/software/repository/github/JoeMcEwen/FAST-PT", "api_url": "https://rseng.github.io/software/api/repos/github/JoeMcEwen/FAST-PT"}, {"uid": "github/joe-antognini/kozai", "html_url": "https://rseng.github.io/software/repository/github/joe-antognini/kozai", "api_url": "https://rseng.github.io/software/api/repos/github/joe-antognini/kozai"}, {"uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "html_url": "https://rseng.github.io/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", "api_url": "https://rseng.github.io/software/api/repos/github/NCAR/NCAR-Classic-Libraries-for-Geophysics"}, {"uid": "github/CTU-Bern/presize", "html_url": "https://rseng.github.io/software/repository/github/CTU-Bern/presize", "api_url": "https://rseng.github.io/software/api/repos/github/CTU-Bern/presize"}, {"uid": "github/mjacob1002/Eir", "html_url": "https://rseng.github.io/software/repository/github/mjacob1002/Eir", "api_url": "https://rseng.github.io/software/api/repos/github/mjacob1002/Eir"}, {"uid": "github/zhangrengang/SubPhaser", "html_url": "https://rseng.github.io/software/repository/github/zhangrengang/SubPhaser", "api_url": "https://rseng.github.io/software/api/repos/github/zhangrengang/SubPhaser"}, {"uid": "github/vbakis/mrs", "html_url": "https://rseng.github.io/software/repository/github/vbakis/mrs", "api_url": "https://rseng.github.io/software/api/repos/github/vbakis/mrs"}, {"uid": "github/Taywee/args", "html_url": "https://rseng.github.io/software/repository/github/Taywee/args", "api_url": "https://rseng.github.io/software/api/repos/github/Taywee/args"}, {"uid": "github/NREL/OpenOA", "html_url": "https://rseng.github.io/software/repository/github/NREL/OpenOA", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/OpenOA"}, {"uid": "github/NREL/VirtualEngineering", "html_url": "https://rseng.github.io/software/repository/github/NREL/VirtualEngineering", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/VirtualEngineering"}, {"uid": "github/NREL/G2Aero", "html_url": "https://rseng.github.io/software/repository/github/NREL/G2Aero", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/G2Aero"}, {"uid": "github/NREL/graph-env", "html_url": "https://rseng.github.io/software/repository/github/NREL/graph-env", "api_url": "https://rseng.github.io/software/api/repos/github/NREL/graph-env"}, {"uid": "github/silx-kit/pyFAI", "html_url": "https://rseng.github.io/software/repository/github/silx-kit/pyFAI", "api_url": "https://rseng.github.io/software/api/repos/github/silx-kit/pyFAI"}, {"uid": "github/chianti-atomic/ChiantiPy", "html_url": "https://rseng.github.io/software/repository/github/chianti-atomic/ChiantiPy", "api_url": "https://rseng.github.io/software/api/repos/github/chianti-atomic/ChiantiPy"}, {"uid": "github/Tomcxf/FASTdRNA", "html_url": "https://rseng.github.io/software/repository/github/Tomcxf/FASTdRNA", "api_url": "https://rseng.github.io/software/api/repos/github/Tomcxf/FASTdRNA"}, {"uid": "github/phenomecentre/nPYc-Toolbox", "html_url": "https://rseng.github.io/software/repository/github/phenomecentre/nPYc-Toolbox", "api_url": "https://rseng.github.io/software/api/repos/github/phenomecentre/nPYc-Toolbox"}, {"uid": "github/Kaixhin/Atari", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Atari", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Atari"}, {"uid": "github/Kaixhin/Rainbow", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Rainbow", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Rainbow"}, {"uid": "github/Kaixhin/FGLab", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGLab", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGLab"}, {"uid": "github/Kaixhin/dockerfiles", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/dockerfiles", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/dockerfiles"}, {"uid": "github/Kaixhin/spinning-up-basic", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/spinning-up-basic", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/spinning-up-basic"}, {"uid": "github/Kaixhin/FGMachine", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/FGMachine", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/FGMachine"}, {"uid": "github/Kaixhin/PlaNet", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/PlaNet", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/PlaNet"}, {"uid": "github/Kaixhin/Autoencoders", "html_url": "https://rseng.github.io/software/repository/github/Kaixhin/Autoencoders", "api_url": "https://rseng.github.io/software/api/repos/github/Kaixhin/Autoencoders"}, {"uid": "github/sylvainprigent/napari-tracks-reader", "html_url": "https://rseng.github.io/software/repository/github/sylvainprigent/napari-tracks-reader", "api_url": "https://rseng.github.io/software/api/repos/github/sylvainprigent/napari-tracks-reader"}, {"uid": "github/SevgiAkten/pycellga", "html_url": "https://rseng.github.io/software/repository/github/SevgiAkten/pycellga", "api_url": "https://rseng.github.io/software/api/repos/github/SevgiAkten/pycellga"}, {"uid": "github/metagentools/gbintk", "html_url": "https://rseng.github.io/software/repository/github/metagentools/gbintk", "api_url": "https://rseng.github.io/software/api/repos/github/metagentools/gbintk"}, {"uid": "github/freesurfer/freesurfer", "html_url": "https://rseng.github.io/software/repository/github/freesurfer/freesurfer", "api_url": "https://rseng.github.io/software/api/repos/github/freesurfer/freesurfer"}, {"uid": "github/metabolomicsworkbench/MetGENE", "html_url": "https://rseng.github.io/software/repository/github/metabolomicsworkbench/MetGENE", "api_url": "https://rseng.github.io/software/api/repos/github/metabolomicsworkbench/MetGENE"}, {"uid": "github/martinvonk/SPEI", "html_url": "https://rseng.github.io/software/repository/github/martinvonk/SPEI", "api_url": "https://rseng.github.io/software/api/repos/github/martinvonk/SPEI"}, {"uid": "github/dnonatar/Sequoia", "html_url": "https://rseng.github.io/software/repository/github/dnonatar/Sequoia", "api_url": "https://rseng.github.io/software/api/repos/github/dnonatar/Sequoia"}, {"uid": "github/szhorvat/IGraphM", "html_url": "https://rseng.github.io/software/repository/github/szhorvat/IGraphM", "api_url": "https://rseng.github.io/software/api/repos/github/szhorvat/IGraphM"}, {"uid": "github/NGSolve/ngsPETSc", "html_url": "https://rseng.github.io/software/repository/github/NGSolve/ngsPETSc", "api_url": "https://rseng.github.io/software/api/repos/github/NGSolve/ngsPETSc"}, {"uid": "github/dmvandamt/beyonce", "html_url": "https://rseng.github.io/software/repository/github/dmvandamt/beyonce", "api_url": "https://rseng.github.io/software/api/repos/github/dmvandamt/beyonce"}, {"uid": "github/Beryl-Jingxin/PyExoCross", "html_url": "https://rseng.github.io/software/repository/github/Beryl-Jingxin/PyExoCross", "api_url": "https://rseng.github.io/software/api/repos/github/Beryl-Jingxin/PyExoCross"}, {"uid": "github/nithyanandan/PRISim", "html_url": "https://rseng.github.io/software/repository/github/nithyanandan/PRISim", "api_url": "https://rseng.github.io/software/api/repos/github/nithyanandan/PRISim"}, {"uid": "github/ComtekAdvancedStructures/cmstatr", "html_url": "https://rseng.github.io/software/repository/github/ComtekAdvancedStructures/cmstatr", "api_url": "https://rseng.github.io/software/api/repos/github/ComtekAdvancedStructures/cmstatr"}, {"uid": "github/cobilab/OptimJV3", "html_url": "https://rseng.github.io/software/repository/github/cobilab/OptimJV3", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/OptimJV3"}, {"uid": "github/cobilab/altair", "html_url": "https://rseng.github.io/software/repository/github/cobilab/altair", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/altair"}, {"uid": "github/cobilab/RFSC", "html_url": "https://rseng.github.io/software/repository/github/cobilab/RFSC", "api_url": "https://rseng.github.io/software/api/repos/github/cobilab/RFSC"}, {"uid": "github/tmcclintock/AReconstructionTool", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/AReconstructionTool", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/AReconstructionTool"}, {"uid": "github/tmcclintock/cluster_toolkit", "html_url": "https://rseng.github.io/software/repository/github/tmcclintock/cluster_toolkit", "api_url": "https://rseng.github.io/software/api/repos/github/tmcclintock/cluster_toolkit"}, {"uid": "github/emunte/vaRHC", "html_url": "https://rseng.github.io/software/repository/github/emunte/vaRHC", "api_url": "https://rseng.github.io/software/api/repos/github/emunte/vaRHC"}, {"uid": "github/hrwakeford/ExoTiC-ISM", "html_url": "https://rseng.github.io/software/repository/github/hrwakeford/ExoTiC-ISM", "api_url": "https://rseng.github.io/software/api/repos/github/hrwakeford/ExoTiC-ISM"}, {"uid": "github/MAnalytics/akmedoids", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/akmedoids", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/akmedoids"}, {"uid": "github/MAnalytics/opitools", "html_url": "https://rseng.github.io/software/repository/github/MAnalytics/opitools", "api_url": "https://rseng.github.io/software/api/repos/github/MAnalytics/opitools"}, {"uid": "github/Materials-Consortia/OPTIMADE-Filter", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/OPTIMADE-Filter", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/OPTIMADE-Filter"}, {"uid": "github/Materials-Consortia/optimade-python-tools", "html_url": "https://rseng.github.io/software/repository/github/Materials-Consortia/optimade-python-tools", "api_url": "https://rseng.github.io/software/api/repos/github/Materials-Consortia/optimade-python-tools"}, {"uid": "github/matsen/pplacer", "html_url": "https://rseng.github.io/software/repository/github/matsen/pplacer", "api_url": "https://rseng.github.io/software/api/repos/github/matsen/pplacer"}, {"uid": "github/inrae/RCaNmodel", "html_url": "https://rseng.github.io/software/repository/github/inrae/RCaNmodel", "api_url": "https://rseng.github.io/software/api/repos/github/inrae/RCaNmodel"}, {"uid": "github/kevin218/Eureka", "html_url": "https://rseng.github.io/software/repository/github/kevin218/Eureka", "api_url": "https://rseng.github.io/software/api/repos/github/kevin218/Eureka"}, {"uid": "github/smaret/astrochem", "html_url": "https://rseng.github.io/software/repository/github/smaret/astrochem", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/astrochem"}, {"uid": "github/smaret/thindisk", "html_url": "https://rseng.github.io/software/repository/github/smaret/thindisk", "api_url": "https://rseng.github.io/software/api/repos/github/smaret/thindisk"}, {"uid": "github/FAU-LAP/NOMAD-CAMELS", "html_url": "https://rseng.github.io/software/repository/github/FAU-LAP/NOMAD-CAMELS", "api_url": "https://rseng.github.io/software/api/repos/github/FAU-LAP/NOMAD-CAMELS"}, {"uid": "github/computational-metabolomics/dimspy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/dimspy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/dimspy"}, {"uid": "github/computational-metabolomics/msnpy", "html_url": "https://rseng.github.io/software/repository/github/computational-metabolomics/msnpy", "api_url": "https://rseng.github.io/software/api/repos/github/computational-metabolomics/msnpy"}, {"uid": "github/samb8s/PsrPopPy", "html_url": "https://rseng.github.io/software/repository/github/samb8s/PsrPopPy", "api_url": "https://rseng.github.io/software/api/repos/github/samb8s/PsrPopPy"}, {"uid": "github/21cmfast/21cmEMU", "html_url": "https://rseng.github.io/software/repository/github/21cmfast/21cmEMU", "api_url": "https://rseng.github.io/software/api/repos/github/21cmfast/21cmEMU"}, {"uid": "github/STAR-Fusion/STAR-Fusion", "html_url": "https://rseng.github.io/software/repository/github/STAR-Fusion/STAR-Fusion", "api_url": "https://rseng.github.io/software/api/repos/github/STAR-Fusion/STAR-Fusion"}, {"uid": "github/PASTAQ-MS/PASTAQ", "html_url": "https://rseng.github.io/software/repository/github/PASTAQ-MS/PASTAQ", "api_url": "https://rseng.github.io/software/api/repos/github/PASTAQ-MS/PASTAQ"}, {"uid": "github/jdswinbank/Comet", "html_url": "https://rseng.github.io/software/repository/github/jdswinbank/Comet", "api_url": "https://rseng.github.io/software/api/repos/github/jdswinbank/Comet"}, {"uid": "github/LaRoccaRaphael/MSI_recalibration", "html_url": "https://rseng.github.io/software/repository/github/LaRoccaRaphael/MSI_recalibration", "api_url": "https://rseng.github.io/software/api/repos/github/LaRoccaRaphael/MSI_recalibration"}, {"uid": "github/jollejolles/pirecorder", "html_url": "https://rseng.github.io/software/repository/github/jollejolles/pirecorder", "api_url": "https://rseng.github.io/software/api/repos/github/jollejolles/pirecorder"}, {"uid": "github/smandal97/Sprout", "html_url": "https://rseng.github.io/software/repository/github/smandal97/Sprout", "api_url": "https://rseng.github.io/software/api/repos/github/smandal97/Sprout"}, {"uid": "github/Ompha/CLUES", "html_url": "https://rseng.github.io/software/repository/github/Ompha/CLUES", "api_url": "https://rseng.github.io/software/api/repos/github/Ompha/CLUES"}, {"uid": "github/n-claes/legolas", "html_url": "https://rseng.github.io/software/repository/github/n-claes/legolas", "api_url": "https://rseng.github.io/software/api/repos/github/n-claes/legolas"}, {"uid": "github/doriancazeneuve/ODNet", "html_url": "https://rseng.github.io/software/repository/github/doriancazeneuve/ODNet", "api_url": "https://rseng.github.io/software/api/repos/github/doriancazeneuve/ODNet"}, {"uid": "github/maize-genetics/rTASSEL", "html_url": "https://rseng.github.io/software/repository/github/maize-genetics/rTASSEL", "api_url": "https://rseng.github.io/software/api/repos/github/maize-genetics/rTASSEL"}, {"uid": "github/IndrajeetPatil/ggstatsplot", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/ggstatsplot", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/ggstatsplot"}, {"uid": "github/IndrajeetPatil/statsExpressions", "html_url": "https://rseng.github.io/software/repository/github/IndrajeetPatil/statsExpressions", "api_url": "https://rseng.github.io/software/api/repos/github/IndrajeetPatil/statsExpressions"}, {"uid": "github/TingMAC/FrMLNet", "html_url": "https://rseng.github.io/software/repository/github/TingMAC/FrMLNet", "api_url": "https://rseng.github.io/software/api/repos/github/TingMAC/FrMLNet"}, {"uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", "html_url": "https://rseng.github.io/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", "api_url": "https://rseng.github.io/software/api/repos/github/TeHanHunter/TESS_Gaia_Light_Curve"}, {"uid": "github/neherlab/nextalign", "html_url": "https://rseng.github.io/software/repository/github/neherlab/nextalign", "api_url": "https://rseng.github.io/software/api/repos/github/neherlab/nextalign"}, {"uid": "github/grimme-lab/xtb", "html_url": "https://rseng.github.io/software/repository/github/grimme-lab/xtb", "api_url": "https://rseng.github.io/software/api/repos/github/grimme-lab/xtb"}, {"uid": "github/ruggiero/galstep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/galstep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/galstep"}, {"uid": "github/ruggiero/clustep", "html_url": "https://rseng.github.io/software/repository/github/ruggiero/clustep", "api_url": "https://rseng.github.io/software/api/repos/github/ruggiero/clustep"}, {"uid": "github/mcfrith/tandem-genotypes", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/tandem-genotypes", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/tandem-genotypes"}, {"uid": "github/mcfrith/dnarrange", "html_url": "https://rseng.github.io/software/repository/github/mcfrith/dnarrange", "api_url": "https://rseng.github.io/software/api/repos/github/mcfrith/dnarrange"}, {"uid": "github/haotianteng/BoostNano", "html_url": "https://rseng.github.io/software/repository/github/haotianteng/BoostNano", "api_url": "https://rseng.github.io/software/api/repos/github/haotianteng/BoostNano"}, {"uid": "github/hungyipu/Odyssey", "html_url": "https://rseng.github.io/software/repository/github/hungyipu/Odyssey", "api_url": "https://rseng.github.io/software/api/repos/github/hungyipu/Odyssey"}, {"uid": "github/meganmansfield/IGRINS_transit", "html_url": "https://rseng.github.io/software/repository/github/meganmansfield/IGRINS_transit", "api_url": "https://rseng.github.io/software/api/repos/github/meganmansfield/IGRINS_transit"}, {"uid": "github/zqfang/gseapy", "html_url": "https://rseng.github.io/software/repository/github/zqfang/gseapy", "api_url": "https://rseng.github.io/software/api/repos/github/zqfang/gseapy"}, {"uid": "github/astro-friedel/CADRE", "html_url": "https://rseng.github.io/software/repository/github/astro-friedel/CADRE", "api_url": "https://rseng.github.io/software/api/repos/github/astro-friedel/CADRE"}, {"uid": "github/cog-imperial/GPdoemd", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/GPdoemd", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/GPdoemd"}, {"uid": "github/cog-imperial/suspect", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/suspect", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/suspect"}, {"uid": "github/cog-imperial/entmoot", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/entmoot", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/entmoot"}, {"uid": "github/cog-imperial/galini", "html_url": "https://rseng.github.io/software/repository/github/cog-imperial/galini", "api_url": "https://rseng.github.io/software/api/repos/github/cog-imperial/galini"}, {"uid": "github/annagraff/densify", "html_url": "https://rseng.github.io/software/repository/github/annagraff/densify", "api_url": "https://rseng.github.io/software/api/repos/github/annagraff/densify"}, {"uid": "github/lanl/PyBNF", "html_url": "https://rseng.github.io/software/repository/github/lanl/PyBNF", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/PyBNF"}, {"uid": "github/lanl/CosmicEmu", "html_url": "https://rseng.github.io/software/repository/github/lanl/CosmicEmu", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/CosmicEmu"}, {"uid": "github/lanl/swiftbat_python", "html_url": "https://rseng.github.io/software/repository/github/lanl/swiftbat_python", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/swiftbat_python"}, {"uid": "github/lanl/spiner", "html_url": "https://rseng.github.io/software/repository/github/lanl/spiner", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/spiner"}, {"uid": "github/lanl/singularity-eos", "html_url": "https://rseng.github.io/software/repository/github/lanl/singularity-eos", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/singularity-eos"}, {"uid": "github/lanl/GLUE", "html_url": "https://rseng.github.io/software/repository/github/lanl/GLUE", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/GLUE"}, {"uid": "github/lanl/scico", "html_url": "https://rseng.github.io/software/repository/github/lanl/scico", "api_url": "https://rseng.github.io/software/api/repos/github/lanl/scico"}, {"uid": "github/beagle-dev/beagle-lib", "html_url": "https://rseng.github.io/software/repository/github/beagle-dev/beagle-lib", "api_url": "https://rseng.github.io/software/api/repos/github/beagle-dev/beagle-lib"}, {"uid": "github/bbye98/mdcraft", "html_url": "https://rseng.github.io/software/repository/github/bbye98/mdcraft", "api_url": "https://rseng.github.io/software/api/repos/github/bbye98/mdcraft"}, {"uid": "github/everval/LongMemory.jl", "html_url": "https://rseng.github.io/software/repository/github/everval/LongMemory.jl", "api_url": "https://rseng.github.io/software/api/repos/github/everval/LongMemory.jl"}, {"uid": "github/villano-lab/nrCascadeSim", "html_url": "https://rseng.github.io/software/repository/github/villano-lab/nrCascadeSim", "api_url": "https://rseng.github.io/software/api/repos/github/villano-lab/nrCascadeSim"}, {"uid": "github/zhangyk8/sconce-scms", "html_url": "https://rseng.github.io/software/repository/github/zhangyk8/sconce-scms", "api_url": "https://rseng.github.io/software/api/repos/github/zhangyk8/sconce-scms"}, {"uid": "github/mgalardini/pyseer", "html_url": "https://rseng.github.io/software/repository/github/mgalardini/pyseer", "api_url": "https://rseng.github.io/software/api/repos/github/mgalardini/pyseer"}, {"uid": "github/citation-file-format/cff-converter-python", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-converter-python", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-converter-python"}, {"uid": "github/citation-file-format/cff-initializer-javascript", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cff-initializer-javascript", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cff-initializer-javascript"}, {"uid": "github/citation-file-format/cffconvert-github-action", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/cffconvert-github-action", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/cffconvert-github-action"}, {"uid": "github/citation-file-format/citation-file-format", "html_url": "https://rseng.github.io/software/repository/github/citation-file-format/citation-file-format", "api_url": "https://rseng.github.io/software/api/repos/github/citation-file-format/citation-file-format"}, {"uid": "github/DessimozLab/read2tree", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/read2tree", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/read2tree"}, {"uid": "github/DessimozLab/omamer", "html_url": "https://rseng.github.io/software/repository/github/DessimozLab/omamer", "api_url": "https://rseng.github.io/software/api/repos/github/DessimozLab/omamer"}, {"uid": "github/rpetit3/fastq-scan", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-scan", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-scan"}, {"uid": "github/rpetit3/fastq-dl", "html_url": "https://rseng.github.io/software/repository/github/rpetit3/fastq-dl", "api_url": "https://rseng.github.io/software/api/repos/github/rpetit3/fastq-dl"}, {"uid": "github/gbernstein/gbdes", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/gbdes", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/gbdes"}, {"uid": "github/gbernstein/pixmappy", "html_url": "https://rseng.github.io/software/repository/github/gbernstein/pixmappy", "api_url": "https://rseng.github.io/software/api/repos/github/gbernstein/pixmappy"}, {"uid": "github/freelawproject/eyecite", "html_url": "https://rseng.github.io/software/repository/github/freelawproject/eyecite", "api_url": "https://rseng.github.io/software/api/repos/github/freelawproject/eyecite"}, {"uid": "github/GabrielNakamura/FishPhyloMaker", "html_url": "https://rseng.github.io/software/repository/github/GabrielNakamura/FishPhyloMaker", "api_url": "https://rseng.github.io/software/api/repos/github/GabrielNakamura/FishPhyloMaker"}, {"uid": "github/LeandroOrdonez/explora-vr-dash-client", "html_url": "https://rseng.github.io/software/repository/github/LeandroOrdonez/explora-vr-dash-client", "api_url": "https://rseng.github.io/software/api/repos/github/LeandroOrdonez/explora-vr-dash-client"}, {"uid": "github/scikit-tda/DREiMac", "html_url": "https://rseng.github.io/software/repository/github/scikit-tda/DREiMac", "api_url": "https://rseng.github.io/software/api/repos/github/scikit-tda/DREiMac"}, {"uid": "github/ArtificialStellarPopulations/ArtPop", "html_url": "https://rseng.github.io/software/repository/github/ArtificialStellarPopulations/ArtPop", "api_url": "https://rseng.github.io/software/api/repos/github/ArtificialStellarPopulations/ArtPop"}, {"uid": "github/GeoArkadeep/Stresslog", "html_url": "https://rseng.github.io/software/repository/github/GeoArkadeep/Stresslog", "api_url": "https://rseng.github.io/software/api/repos/github/GeoArkadeep/Stresslog"}, {"uid": "github/solerjuan/astroHOG", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/astroHOG", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/astroHOG"}, {"uid": "github/solerjuan/magnetar", "html_url": "https://rseng.github.io/software/repository/github/solerjuan/magnetar", "api_url": "https://rseng.github.io/software/api/repos/github/solerjuan/magnetar"}, {"uid": "github/xuequan818/MatrixFuns.jl", "html_url": "https://rseng.github.io/software/repository/github/xuequan818/MatrixFuns.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xuequan818/MatrixFuns.jl"}, {"uid": "github/esilver01/small-lens-forecast-sims", "html_url": "https://rseng.github.io/software/repository/github/esilver01/small-lens-forecast-sims", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/small-lens-forecast-sims"}, {"uid": "github/esilver01/resnet-model-training", "html_url": "https://rseng.github.io/software/repository/github/esilver01/resnet-model-training", "api_url": "https://rseng.github.io/software/api/repos/github/esilver01/resnet-model-training"}, {"uid": "github/korcsmarosgroup/TFlink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/TFlink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/TFlink"}, {"uid": "github/korcsmarosgroup/CytokineLink", "html_url": "https://rseng.github.io/software/repository/github/korcsmarosgroup/CytokineLink", "api_url": "https://rseng.github.io/software/api/repos/github/korcsmarosgroup/CytokineLink"}, {"uid": "github/shadden/celmech", "html_url": "https://rseng.github.io/software/repository/github/shadden/celmech", "api_url": "https://rseng.github.io/software/api/repos/github/shadden/celmech"}, {"uid": "github/NeamulKabir/EnsembleFam", "html_url": "https://rseng.github.io/software/repository/github/NeamulKabir/EnsembleFam", "api_url": "https://rseng.github.io/software/api/repos/github/NeamulKabir/EnsembleFam"}, {"uid": "github/carpyncho/carpyncho-py", "html_url": "https://rseng.github.io/software/repository/github/carpyncho/carpyncho-py", "api_url": "https://rseng.github.io/software/api/repos/github/carpyncho/carpyncho-py"}, {"uid": "github/ShixiangWang/sigminer", "html_url": "https://rseng.github.io/software/repository/github/ShixiangWang/sigminer", "api_url": "https://rseng.github.io/software/api/repos/github/ShixiangWang/sigminer"}, {"uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", "html_url": "https://rseng.github.io/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", "api_url": "https://rseng.github.io/software/api/repos/github/jmason86/James-s-EVE-Dimming-Index-JEDI"}, {"uid": "github/ESMValGroup/ESMValCore", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValCore", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValCore"}, {"uid": "github/ESMValGroup/ESMValTool", "html_url": "https://rseng.github.io/software/repository/github/ESMValGroup/ESMValTool", "api_url": "https://rseng.github.io/software/api/repos/github/ESMValGroup/ESMValTool"}, {"uid": "github/MBoemo/DNAscent", "html_url": "https://rseng.github.io/software/repository/github/MBoemo/DNAscent", "api_url": "https://rseng.github.io/software/api/repos/github/MBoemo/DNAscent"}, {"uid": "github/smith-chem-wisc/ProteaseGuru", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/ProteaseGuru", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/ProteaseGuru"}, {"uid": "github/smith-chem-wisc/MetaMorpheus", "html_url": "https://rseng.github.io/software/repository/github/smith-chem-wisc/MetaMorpheus", "api_url": "https://rseng.github.io/software/api/repos/github/smith-chem-wisc/MetaMorpheus"}, {"uid": "github/waynebhayes/SpArcFiRe", "html_url": "https://rseng.github.io/software/repository/github/waynebhayes/SpArcFiRe", "api_url": "https://rseng.github.io/software/api/repos/github/waynebhayes/SpArcFiRe"}, {"uid": "github/lyalpha/pympc", "html_url": "https://rseng.github.io/software/repository/github/lyalpha/pympc", "api_url": "https://rseng.github.io/software/api/repos/github/lyalpha/pympc"}, {"uid": "github/yanrong-stacy-song/creditr", "html_url": "https://rseng.github.io/software/repository/github/yanrong-stacy-song/creditr", "api_url": "https://rseng.github.io/software/api/repos/github/yanrong-stacy-song/creditr"}, {"uid": "github/gumilevskij/Framework", "html_url": "https://rseng.github.io/software/repository/github/gumilevskij/Framework", "api_url": "https://rseng.github.io/software/api/repos/github/gumilevskij/Framework"}, {"uid": "github/xuanxu/starmatrix", "html_url": "https://rseng.github.io/software/repository/github/xuanxu/starmatrix", "api_url": "https://rseng.github.io/software/api/repos/github/xuanxu/starmatrix"}, {"uid": "github/madysonb/EVA", "html_url": "https://rseng.github.io/software/repository/github/madysonb/EVA", "api_url": "https://rseng.github.io/software/api/repos/github/madysonb/EVA"}, {"uid": "github/jtksai/PyCOOL", "html_url": "https://rseng.github.io/software/repository/github/jtksai/PyCOOL", "api_url": "https://rseng.github.io/software/api/repos/github/jtksai/PyCOOL"}, {"uid": "github/will-rowe/groot", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/groot", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/groot"}, {"uid": "github/will-rowe/hulk", "html_url": "https://rseng.github.io/software/repository/github/will-rowe/hulk", "api_url": "https://rseng.github.io/software/api/repos/github/will-rowe/hulk"}, {"uid": "github/tkchafin/autostreamtree", "html_url": "https://rseng.github.io/software/repository/github/tkchafin/autostreamtree", "api_url": "https://rseng.github.io/software/api/repos/github/tkchafin/autostreamtree"}, {"uid": "github/alexandercoulter/fastfrechet", "html_url": "https://rseng.github.io/software/repository/github/alexandercoulter/fastfrechet", "api_url": "https://rseng.github.io/software/api/repos/github/alexandercoulter/fastfrechet"}, {"uid": "github/ptriska/WavesDash", "html_url": "https://rseng.github.io/software/repository/github/ptriska/WavesDash", "api_url": "https://rseng.github.io/software/api/repos/github/ptriska/WavesDash"}, {"uid": "github/BiaPyX/BiaPy", "html_url": "https://rseng.github.io/software/repository/github/BiaPyX/BiaPy", "api_url": "https://rseng.github.io/software/api/repos/github/BiaPyX/BiaPy"}, {"uid": "github/NarlikarLab/exoDIVERSITY", "html_url": "https://rseng.github.io/software/repository/github/NarlikarLab/exoDIVERSITY", "api_url": "https://rseng.github.io/software/api/repos/github/NarlikarLab/exoDIVERSITY"}, {"uid": "github/odelaneau/shapeit5", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit5", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit5"}, {"uid": "github/odelaneau/shapeit4", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/shapeit4", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/shapeit4"}, {"uid": "github/odelaneau/GLIMPSE", "html_url": "https://rseng.github.io/software/repository/github/odelaneau/GLIMPSE", "api_url": "https://rseng.github.io/software/api/repos/github/odelaneau/GLIMPSE"}, {"uid": "github/WGLab/LongGF", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongGF", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongGF"}, {"uid": "github/WGLab/PhenoGPT2", "html_url": "https://rseng.github.io/software/repository/github/WGLab/PhenoGPT2", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/PhenoGPT2"}, {"uid": "github/WGLab/LongReadSum", "html_url": "https://rseng.github.io/software/repository/github/WGLab/LongReadSum", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/LongReadSum"}, {"uid": "github/WGLab/InterVar", "html_url": "https://rseng.github.io/software/repository/github/WGLab/InterVar", "api_url": "https://rseng.github.io/software/api/repos/github/WGLab/InterVar"}, {"uid": "github/gokalpcelik/ROHMMCLI", "html_url": "https://rseng.github.io/software/repository/github/gokalpcelik/ROHMMCLI", "api_url": "https://rseng.github.io/software/api/repos/github/gokalpcelik/ROHMMCLI"}, {"uid": "github/moscibrodzka/ipole", "html_url": "https://rseng.github.io/software/repository/github/moscibrodzka/ipole", "api_url": "https://rseng.github.io/software/api/repos/github/moscibrodzka/ipole"}, {"uid": "github/dondi/GRNsight", "html_url": "https://rseng.github.io/software/repository/github/dondi/GRNsight", "api_url": "https://rseng.github.io/software/api/repos/github/dondi/GRNsight"}, {"uid": "github/EXP-code/EXP", "html_url": "https://rseng.github.io/software/repository/github/EXP-code/EXP", "api_url": "https://rseng.github.io/software/api/repos/github/EXP-code/EXP"}, {"uid": "github/khyox/recentrifuge", "html_url": "https://rseng.github.io/software/repository/github/khyox/recentrifuge", "api_url": "https://rseng.github.io/software/api/repos/github/khyox/recentrifuge"}, {"uid": "github/leonzheng2/butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/butterfly"}, {"uid": "github/leonzheng2/efficient-butterfly", "html_url": "https://rseng.github.io/software/repository/github/leonzheng2/efficient-butterfly", "api_url": "https://rseng.github.io/software/api/repos/github/leonzheng2/efficient-butterfly"}, {"uid": "github/pudu-py/pudu", "html_url": "https://rseng.github.io/software/repository/github/pudu-py/pudu", "api_url": "https://rseng.github.io/software/api/repos/github/pudu-py/pudu"}, {"uid": "github/AlexanderBartholomaeus/smORFer", "html_url": "https://rseng.github.io/software/repository/github/AlexanderBartholomaeus/smORFer", "api_url": "https://rseng.github.io/software/api/repos/github/AlexanderBartholomaeus/smORFer"}, {"uid": "github/dfguan/purge_dups", "html_url": "https://rseng.github.io/software/repository/github/dfguan/purge_dups", "api_url": "https://rseng.github.io/software/api/repos/github/dfguan/purge_dups"}, {"uid": "github/biod/sambamba", "html_url": "https://rseng.github.io/software/repository/github/biod/sambamba", "api_url": "https://rseng.github.io/software/api/repos/github/biod/sambamba"}, {"uid": "github/tschad/pycelp", "html_url": "https://rseng.github.io/software/repository/github/tschad/pycelp", "api_url": "https://rseng.github.io/software/api/repos/github/tschad/pycelp"}, {"uid": "github/wonderful1/CNV-PG", "html_url": "https://rseng.github.io/software/repository/github/wonderful1/CNV-PG", "api_url": "https://rseng.github.io/software/api/repos/github/wonderful1/CNV-PG"}, {"uid": "github/spacepy/spacepy", "html_url": "https://rseng.github.io/software/repository/github/spacepy/spacepy", "api_url": "https://rseng.github.io/software/api/repos/github/spacepy/spacepy"}, {"uid": "github/MSABuschmann/sledgehamr", "html_url": "https://rseng.github.io/software/repository/github/MSABuschmann/sledgehamr", "api_url": "https://rseng.github.io/software/api/repos/github/MSABuschmann/sledgehamr"}, {"uid": "github/algolab/shark", "html_url": "https://rseng.github.io/software/repository/github/algolab/shark", "api_url": "https://rseng.github.io/software/api/repos/github/algolab/shark"}, {"uid": "github/GRIT-RBSim/GRIT", "html_url": "https://rseng.github.io/software/repository/github/GRIT-RBSim/GRIT", "api_url": "https://rseng.github.io/software/api/repos/github/GRIT-RBSim/GRIT"}, {"uid": "github/p-slash/qsonic", "html_url": "https://rseng.github.io/software/repository/github/p-slash/qsonic", "api_url": "https://rseng.github.io/software/api/repos/github/p-slash/qsonic"}, {"uid": "github/AndreyTavleev/DiscVerSt", "html_url": "https://rseng.github.io/software/repository/github/AndreyTavleev/DiscVerSt", "api_url": "https://rseng.github.io/software/api/repos/github/AndreyTavleev/DiscVerSt"}, {"uid": "github/RichardObi/medigan", "html_url": "https://rseng.github.io/software/repository/github/RichardObi/medigan", "api_url": "https://rseng.github.io/software/api/repos/github/RichardObi/medigan"}, {"uid": "github/SMTG-UCL/surfaxe", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/surfaxe", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/surfaxe"}, {"uid": "github/SMTG-UCL/ShakeNBreak", "html_url": "https://rseng.github.io/software/repository/github/SMTG-UCL/ShakeNBreak", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-UCL/ShakeNBreak"}, {"uid": "github/elixir-europe/rdmkit", "html_url": "https://rseng.github.io/software/repository/github/elixir-europe/rdmkit", "api_url": "https://rseng.github.io/software/api/repos/github/elixir-europe/rdmkit"}, {"uid": "github/ERA-URBAN/netcdf2littler", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/netcdf2littler", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/netcdf2littler"}, {"uid": "github/ERA-URBAN/fm128_radar", "html_url": "https://rseng.github.io/software/repository/github/ERA-URBAN/fm128_radar", "api_url": "https://rseng.github.io/software/api/repos/github/ERA-URBAN/fm128_radar"}, {"uid": "github/discsim/frank", "html_url": "https://rseng.github.io/software/repository/github/discsim/frank", "api_url": "https://rseng.github.io/software/api/repos/github/discsim/frank"}, {"uid": "github/TeamLEGWORK/LEGWORK", "html_url": "https://rseng.github.io/software/repository/github/TeamLEGWORK/LEGWORK", "api_url": "https://rseng.github.io/software/api/repos/github/TeamLEGWORK/LEGWORK"}, {"uid": "github/sheinasim/HiFiAdapterFilt", "html_url": "https://rseng.github.io/software/repository/github/sheinasim/HiFiAdapterFilt", "api_url": "https://rseng.github.io/software/api/repos/github/sheinasim/HiFiAdapterFilt"}, {"uid": "github/YSOVAR/YSOVAR", "html_url": "https://rseng.github.io/software/repository/github/YSOVAR/YSOVAR", "api_url": "https://rseng.github.io/software/api/repos/github/YSOVAR/YSOVAR"}, {"uid": "github/pelahi/VELOCIraptor-STF", "html_url": "https://rseng.github.io/software/repository/github/pelahi/VELOCIraptor-STF", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/VELOCIraptor-STF"}, {"uid": "github/pelahi/TreeFrog", "html_url": "https://rseng.github.io/software/repository/github/pelahi/TreeFrog", "api_url": "https://rseng.github.io/software/api/repos/github/pelahi/TreeFrog"}, {"uid": "github/dolaver/calsagos", "html_url": "https://rseng.github.io/software/repository/github/dolaver/calsagos", "api_url": "https://rseng.github.io/software/api/repos/github/dolaver/calsagos"}, {"uid": "github/mthorrell/gbnet", "html_url": "https://rseng.github.io/software/repository/github/mthorrell/gbnet", "api_url": "https://rseng.github.io/software/api/repos/github/mthorrell/gbnet"}, {"uid": "github/valentineap/pyprop8", "html_url": "https://rseng.github.io/software/repository/github/valentineap/pyprop8", "api_url": "https://rseng.github.io/software/api/repos/github/valentineap/pyprop8"}, {"uid": "github/jfoster17/extinction-distances", "html_url": "https://rseng.github.io/software/repository/github/jfoster17/extinction-distances", "api_url": "https://rseng.github.io/software/api/repos/github/jfoster17/extinction-distances"}, {"uid": "github/cumbof/honto", "html_url": "https://rseng.github.io/software/repository/github/cumbof/honto", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/honto"}, {"uid": "github/cumbof/MetaSBT-DBs", "html_url": "https://rseng.github.io/software/repository/github/cumbof/MetaSBT-DBs", "api_url": "https://rseng.github.io/software/api/repos/github/cumbof/MetaSBT-DBs"}, {"uid": "github/anuwu/DAGN-Blindtest", "html_url": "https://rseng.github.io/software/repository/github/anuwu/DAGN-Blindtest", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/DAGN-Blindtest"}, {"uid": "github/anuwu/GOTHIC", "html_url": "https://rseng.github.io/software/repository/github/anuwu/GOTHIC", "api_url": "https://rseng.github.io/software/api/repos/github/anuwu/GOTHIC"}, {"uid": "github/CITCOM-project/CausalTestingFramework", "html_url": "https://rseng.github.io/software/repository/github/CITCOM-project/CausalTestingFramework", "api_url": "https://rseng.github.io/software/api/repos/github/CITCOM-project/CausalTestingFramework"}, {"uid": "github/NSAPH-Software/CRE", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/CRE", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/CRE"}, {"uid": "github/NSAPH-Software/GPCERF", "html_url": "https://rseng.github.io/software/repository/github/NSAPH-Software/GPCERF", "api_url": "https://rseng.github.io/software/api/repos/github/NSAPH-Software/GPCERF"}, {"uid": "github/v-morello/iqrm", "html_url": "https://rseng.github.io/software/repository/github/v-morello/iqrm", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/iqrm"}, {"uid": "github/v-morello/riptide", "html_url": "https://rseng.github.io/software/repository/github/v-morello/riptide", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/riptide"}, {"uid": "github/v-morello/clfd", "html_url": "https://rseng.github.io/software/repository/github/v-morello/clfd", "api_url": "https://rseng.github.io/software/api/repos/github/v-morello/clfd"}, {"uid": "github/wangsiwei2010/FPMVS-CAG", "html_url": "https://rseng.github.io/software/repository/github/wangsiwei2010/FPMVS-CAG", "api_url": "https://rseng.github.io/software/api/repos/github/wangsiwei2010/FPMVS-CAG"}, {"uid": "github/arviz-devs/arviz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/arviz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/arviz"}, {"uid": "github/arviz-devs/preliz", "html_url": "https://rseng.github.io/software/repository/github/arviz-devs/preliz", "api_url": "https://rseng.github.io/software/api/repos/github/arviz-devs/preliz"}, {"uid": "github/tomlouden/spiderman", "html_url": "https://rseng.github.io/software/repository/github/tomlouden/spiderman", "api_url": "https://rseng.github.io/software/api/repos/github/tomlouden/spiderman"}, {"uid": "github/kyleaoman/martini", "html_url": "https://rseng.github.io/software/repository/github/kyleaoman/martini", "api_url": "https://rseng.github.io/software/api/repos/github/kyleaoman/martini"}, {"uid": "github/JD2112/methylr", "html_url": "https://rseng.github.io/software/repository/github/JD2112/methylr", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/methylr"}, {"uid": "github/JD2112/TwistMethylFlow", "html_url": "https://rseng.github.io/software/repository/github/JD2112/TwistMethylFlow", "api_url": "https://rseng.github.io/software/api/repos/github/JD2112/TwistMethylFlow"}, {"uid": "github/gwpy/gwpy", "html_url": "https://rseng.github.io/software/repository/github/gwpy/gwpy", "api_url": "https://rseng.github.io/software/api/repos/github/gwpy/gwpy"}, {"uid": "github/lmcinnes/umap", "html_url": "https://rseng.github.io/software/repository/github/lmcinnes/umap", "api_url": "https://rseng.github.io/software/api/repos/github/lmcinnes/umap"}, {"uid": "github/seung-lab/FlyWirePaper", "html_url": "https://rseng.github.io/software/repository/github/seung-lab/FlyWirePaper", "api_url": "https://rseng.github.io/software/api/repos/github/seung-lab/FlyWirePaper"}, {"uid": "github/algo-cancer/CAMMiQ", "html_url": "https://rseng.github.io/software/repository/github/algo-cancer/CAMMiQ", "api_url": "https://rseng.github.io/software/api/repos/github/algo-cancer/CAMMiQ"}, {"uid": "github/JuliaGeo/CFTime.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaGeo/CFTime.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaGeo/CFTime.jl"}, {"uid": "github/marcocalza89/GrayHawk", "html_url": "https://rseng.github.io/software/repository/github/marcocalza89/GrayHawk", "api_url": "https://rseng.github.io/software/api/repos/github/marcocalza89/GrayHawk"}, {"uid": "github/damienmarsic/Parent-map", "html_url": "https://rseng.github.io/software/repository/github/damienmarsic/Parent-map", "api_url": "https://rseng.github.io/software/api/repos/github/damienmarsic/Parent-map"}, {"uid": "github/kbarbary/nestle", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/nestle", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/nestle"}, {"uid": "github/kbarbary/sep", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/sep", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/sep"}, {"uid": "github/kbarbary/extinction", "html_url": "https://rseng.github.io/software/repository/github/kbarbary/extinction", "api_url": "https://rseng.github.io/software/api/repos/github/kbarbary/extinction"}, {"uid": "github/sensein/etelemetry-client", "html_url": "https://rseng.github.io/software/repository/github/sensein/etelemetry-client", "api_url": "https://rseng.github.io/software/api/repos/github/sensein/etelemetry-client"}, {"uid": "github/threeML/threeML", "html_url": "https://rseng.github.io/software/repository/github/threeML/threeML", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/threeML"}, {"uid": "github/threeML/astromodels", "html_url": "https://rseng.github.io/software/repository/github/threeML/astromodels", "api_url": "https://rseng.github.io/software/api/repos/github/threeML/astromodels"}, {"uid": "github/lrnv/cort", "html_url": "https://rseng.github.io/software/repository/github/lrnv/cort", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/cort"}, {"uid": "github/lrnv/Copulas.jl", "html_url": "https://rseng.github.io/software/repository/github/lrnv/Copulas.jl", "api_url": "https://rseng.github.io/software/api/repos/github/lrnv/Copulas.jl"}, {"uid": "github/Ohervet/Bjet_MCMC", "html_url": "https://rseng.github.io/software/repository/github/Ohervet/Bjet_MCMC", "api_url": "https://rseng.github.io/software/api/repos/github/Ohervet/Bjet_MCMC"}, {"uid": "github/gausspy/gausspy", "html_url": "https://rseng.github.io/software/repository/github/gausspy/gausspy", "api_url": "https://rseng.github.io/software/api/repos/github/gausspy/gausspy"}, {"uid": "github/FunctionalUrology/MLcps", "html_url": "https://rseng.github.io/software/repository/github/FunctionalUrology/MLcps", "api_url": "https://rseng.github.io/software/api/repos/github/FunctionalUrology/MLcps"}, {"uid": "github/kowallus/mbgc", "html_url": "https://rseng.github.io/software/repository/github/kowallus/mbgc", "api_url": "https://rseng.github.io/software/api/repos/github/kowallus/mbgc"}, {"uid": "github/xiaotiand/FunFor", "html_url": "https://rseng.github.io/software/repository/github/xiaotiand/FunFor", "api_url": "https://rseng.github.io/software/api/repos/github/xiaotiand/FunFor"}, {"uid": "github/andresmegias/gildas-class-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/gildas-class-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/gildas-class-python"}, {"uid": "github/andresmegias/richvalues", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/richvalues", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/richvalues"}, {"uid": "github/andresmegias/radex-python", "html_url": "https://rseng.github.io/software/repository/github/andresmegias/radex-python", "api_url": "https://rseng.github.io/software/api/repos/github/andresmegias/radex-python"}, {"uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", "html_url": "https://rseng.github.io/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", "api_url": "https://rseng.github.io/software/api/repos/github/teamPSG/kNN_Sleep_Scorer_kNNSS"}, {"uid": "github/jonbmartin/pulpy", "html_url": "https://rseng.github.io/software/repository/github/jonbmartin/pulpy", "api_url": "https://rseng.github.io/software/api/repos/github/jonbmartin/pulpy"}, {"uid": "github/kundajelab/phantompeakqualtools", "html_url": "https://rseng.github.io/software/repository/github/kundajelab/phantompeakqualtools", "api_url": "https://rseng.github.io/software/api/repos/github/kundajelab/phantompeakqualtools"}, {"uid": "github/rjsmethurst/snitch", "html_url": "https://rseng.github.io/software/repository/github/rjsmethurst/snitch", "api_url": "https://rseng.github.io/software/api/repos/github/rjsmethurst/snitch"}, {"uid": "github/AMSSwanglab/RE-GOA", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/RE-GOA", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/RE-GOA"}, {"uid": "github/AMSSwanglab/SpecVar", "html_url": "https://rseng.github.io/software/repository/github/AMSSwanglab/SpecVar", "api_url": "https://rseng.github.io/software/api/repos/github/AMSSwanglab/SpecVar"}, {"uid": "github/multiwavelength/gleam", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/gleam", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/gleam"}, {"uid": "github/multiwavelength/redshifts", "html_url": "https://rseng.github.io/software/repository/github/multiwavelength/redshifts", "api_url": "https://rseng.github.io/software/api/repos/github/multiwavelength/redshifts"}, {"uid": "github/pymedphys/pymedphys", "html_url": "https://rseng.github.io/software/repository/github/pymedphys/pymedphys", "api_url": "https://rseng.github.io/software/api/repos/github/pymedphys/pymedphys"}, {"uid": "github/podondra/bayesian-sznet", "html_url": "https://rseng.github.io/software/repository/github/podondra/bayesian-sznet", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/bayesian-sznet"}, {"uid": "github/podondra/eidein", "html_url": "https://rseng.github.io/software/repository/github/podondra/eidein", "api_url": "https://rseng.github.io/software/api/repos/github/podondra/eidein"}, {"uid": "github/BenMql/coral", "html_url": "https://rseng.github.io/software/repository/github/BenMql/coral", "api_url": "https://rseng.github.io/software/api/repos/github/BenMql/coral"}, {"uid": "github/NextGenCMB/lensitbiases", "html_url": "https://rseng.github.io/software/repository/github/NextGenCMB/lensitbiases", "api_url": "https://rseng.github.io/software/api/repos/github/NextGenCMB/lensitbiases"}, {"uid": "github/ewels/MultiQC", "html_url": "https://rseng.github.io/software/repository/github/ewels/MultiQC", "api_url": "https://rseng.github.io/software/api/repos/github/ewels/MultiQC"}, {"uid": "github/JianjunTan-Beijing/LPI-CSFFR", "html_url": "https://rseng.github.io/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", "api_url": "https://rseng.github.io/software/api/repos/github/JianjunTan-Beijing/LPI-CSFFR"}, {"uid": "github/mdlreyes/void-dwarf-analysis", "html_url": "https://rseng.github.io/software/repository/github/mdlreyes/void-dwarf-analysis", "api_url": "https://rseng.github.io/software/api/repos/github/mdlreyes/void-dwarf-analysis"}, {"uid": "github/ulelab/ultraplex", "html_url": "https://rseng.github.io/software/repository/github/ulelab/ultraplex", "api_url": "https://rseng.github.io/software/api/repos/github/ulelab/ultraplex"}, {"uid": "github/childmindresearch/wristpy", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/wristpy", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/wristpy"}, {"uid": "github/childmindresearch/actisleep-tracker", "html_url": "https://rseng.github.io/software/repository/github/childmindresearch/actisleep-tracker", "api_url": "https://rseng.github.io/software/api/repos/github/childmindresearch/actisleep-tracker"}, {"uid": "github/apertif/apercal", "html_url": "https://rseng.github.io/software/repository/github/apertif/apercal", "api_url": "https://rseng.github.io/software/api/repos/github/apertif/apercal"}, {"uid": "github/facebookresearch/segment-anything", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/segment-anything", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/segment-anything"}, {"uid": "github/facebookresearch/faiss", "html_url": "https://rseng.github.io/software/repository/github/facebookresearch/faiss", "api_url": "https://rseng.github.io/software/api/repos/github/facebookresearch/faiss"}, {"uid": "github/daissi/thesias", "html_url": "https://rseng.github.io/software/repository/github/daissi/thesias", "api_url": "https://rseng.github.io/software/api/repos/github/daissi/thesias"}, {"uid": "github/beebdev/HARU", "html_url": "https://rseng.github.io/software/repository/github/beebdev/HARU", "api_url": "https://rseng.github.io/software/api/repos/github/beebdev/HARU"}, {"uid": "github/cbg-ethz/LolliPop", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/LolliPop", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/LolliPop"}, {"uid": "github/cbg-ethz/smallgenomeutilities", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/smallgenomeutilities", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/smallgenomeutilities"}, {"uid": "github/cbg-ethz/V-pipe", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/V-pipe", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/V-pipe"}, {"uid": "github/cbg-ethz/shorah", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/shorah", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/shorah"}, {"uid": "github/cbg-ethz/PredictHaplo", "html_url": "https://rseng.github.io/software/repository/github/cbg-ethz/PredictHaplo", "api_url": "https://rseng.github.io/software/api/repos/github/cbg-ethz/PredictHaplo"}, {"uid": "github/DyHealthNet/NApy", "html_url": "https://rseng.github.io/software/repository/github/DyHealthNet/NApy", "api_url": "https://rseng.github.io/software/api/repos/github/DyHealthNet/NApy"}, {"uid": "github/djgroen/MPWide", "html_url": "https://rseng.github.io/software/repository/github/djgroen/MPWide", "api_url": "https://rseng.github.io/software/api/repos/github/djgroen/MPWide"}, {"uid": "github/shaelebrown/TDApplied", "html_url": "https://rseng.github.io/software/repository/github/shaelebrown/TDApplied", "api_url": "https://rseng.github.io/software/api/repos/github/shaelebrown/TDApplied"}, {"uid": "github/vmmunoza/nuHawkHunter", "html_url": "https://rseng.github.io/software/repository/github/vmmunoza/nuHawkHunter", "api_url": "https://rseng.github.io/software/api/repos/github/vmmunoza/nuHawkHunter"}, {"uid": "github/exobssim/rapoc-public", "html_url": "https://rseng.github.io/software/repository/github/exobssim/rapoc-public", "api_url": "https://rseng.github.io/software/api/repos/github/exobssim/rapoc-public"}, {"uid": "github/mivp/encube", "html_url": "https://rseng.github.io/software/repository/github/mivp/encube", "api_url": "https://rseng.github.io/software/api/repos/github/mivp/encube"}, {"uid": "github/openCARP-org/FACILE-RS", "html_url": "https://rseng.github.io/software/repository/github/openCARP-org/FACILE-RS", "api_url": "https://rseng.github.io/software/api/repos/github/openCARP-org/FACILE-RS"}, {"uid": "github/UUDigitalHumanitieslab/texcavator", "html_url": "https://rseng.github.io/software/repository/github/UUDigitalHumanitieslab/texcavator", "api_url": "https://rseng.github.io/software/api/repos/github/UUDigitalHumanitieslab/texcavator"}, {"uid": "github/BenitoFar/NestedComBat", "html_url": "https://rseng.github.io/software/repository/github/BenitoFar/NestedComBat", "api_url": "https://rseng.github.io/software/api/repos/github/BenitoFar/NestedComBat"}, {"uid": "github/abaleato/CARDiAC", "html_url": "https://rseng.github.io/software/repository/github/abaleato/CARDiAC", "api_url": "https://rseng.github.io/software/api/repos/github/abaleato/CARDiAC"}, {"uid": "github/gmarcais/Quorum", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Quorum", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Quorum"}, {"uid": "github/gmarcais/Jellyfish", "html_url": "https://rseng.github.io/software/repository/github/gmarcais/Jellyfish", "api_url": "https://rseng.github.io/software/api/repos/github/gmarcais/Jellyfish"}, {"uid": "github/davemlz/eemont", "html_url": "https://rseng.github.io/software/repository/github/davemlz/eemont", "api_url": "https://rseng.github.io/software/api/repos/github/davemlz/eemont"}, {"uid": "github/bpp/bpp", "html_url": "https://rseng.github.io/software/repository/github/bpp/bpp", "api_url": "https://rseng.github.io/software/api/repos/github/bpp/bpp"}, {"uid": "github/trevisanj/PFANT", "html_url": "https://rseng.github.io/software/repository/github/trevisanj/PFANT", "api_url": "https://rseng.github.io/software/api/repos/github/trevisanj/PFANT"}, {"uid": "github/cadet/CADET-Core", "html_url": "https://rseng.github.io/software/repository/github/cadet/CADET-Core", "api_url": "https://rseng.github.io/software/api/repos/github/cadet/CADET-Core"}, {"uid": "github/xoopR/set6", "html_url": "https://rseng.github.io/software/repository/github/xoopR/set6", "api_url": "https://rseng.github.io/software/api/repos/github/xoopR/set6"}, {"uid": "github/LDEO-CREW/Pythonic-DISORT", "html_url": "https://rseng.github.io/software/repository/github/LDEO-CREW/Pythonic-DISORT", "api_url": "https://rseng.github.io/software/api/repos/github/LDEO-CREW/Pythonic-DISORT"}, {"uid": "github/phillippro/pexo", "html_url": "https://rseng.github.io/software/repository/github/phillippro/pexo", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/pexo"}, {"uid": "github/phillippro/agatha", "html_url": "https://rseng.github.io/software/repository/github/phillippro/agatha", "api_url": "https://rseng.github.io/software/api/repos/github/phillippro/agatha"}, {"uid": "github/tupui/scipy", "html_url": "https://rseng.github.io/software/repository/github/tupui/scipy", "api_url": "https://rseng.github.io/software/api/repos/github/tupui/scipy"}, {"uid": "github/klho/FLAM", "html_url": "https://rseng.github.io/software/repository/github/klho/FLAM", "api_url": "https://rseng.github.io/software/api/repos/github/klho/FLAM"}, {"uid": "github/tlancian/bio_cs", "html_url": "https://rseng.github.io/software/repository/github/tlancian/bio_cs", "api_url": "https://rseng.github.io/software/api/repos/github/tlancian/bio_cs"}, {"uid": "github/realfastvla/rfpipe", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/rfpipe", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/rfpipe"}, {"uid": "github/realfastvla/realfast", "html_url": "https://rseng.github.io/software/repository/github/realfastvla/realfast", "api_url": "https://rseng.github.io/software/api/repos/github/realfastvla/realfast"}, {"uid": "github/Ouranosinc/xclim", "html_url": "https://rseng.github.io/software/repository/github/Ouranosinc/xclim", "api_url": "https://rseng.github.io/software/api/repos/github/Ouranosinc/xclim"}, {"uid": "github/openmsi/openmsistream", "html_url": "https://rseng.github.io/software/repository/github/openmsi/openmsistream", "api_url": "https://rseng.github.io/software/api/repos/github/openmsi/openmsistream"}, {"uid": "github/bayesn/bayesn", "html_url": "https://rseng.github.io/software/repository/github/bayesn/bayesn", "api_url": "https://rseng.github.io/software/api/repos/github/bayesn/bayesn"}, {"uid": "github/greendw/AntabGMVA", "html_url": "https://rseng.github.io/software/repository/github/greendw/AntabGMVA", "api_url": "https://rseng.github.io/software/api/repos/github/greendw/AntabGMVA"}, {"uid": "github/KeplerGO/kadenza", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/kadenza", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/kadenza"}, {"uid": "github/KeplerGO/PyKE", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/PyKE", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/PyKE"}, {"uid": "github/KeplerGO/k2mosaic", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/k2mosaic", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/k2mosaic"}, {"uid": "github/KeplerGO/K2fov", "html_url": "https://rseng.github.io/software/repository/github/KeplerGO/K2fov", "api_url": "https://rseng.github.io/software/api/repos/github/KeplerGO/K2fov"}, {"uid": "github/bluesky/bluesky", "html_url": "https://rseng.github.io/software/repository/github/bluesky/bluesky", "api_url": "https://rseng.github.io/software/api/repos/github/bluesky/bluesky"}, {"uid": "github/nathandecaux/labelprop", "html_url": "https://rseng.github.io/software/repository/github/nathandecaux/labelprop", "api_url": "https://rseng.github.io/software/api/repos/github/nathandecaux/labelprop"}, {"uid": "github/veg/hivtrace", "html_url": "https://rseng.github.io/software/repository/github/veg/hivtrace", "api_url": "https://rseng.github.io/software/api/repos/github/veg/hivtrace"}, {"uid": "github/veg/tn93", "html_url": "https://rseng.github.io/software/repository/github/veg/tn93", "api_url": "https://rseng.github.io/software/api/repos/github/veg/tn93"}, {"uid": "github/ynop/audiomate", "html_url": "https://rseng.github.io/software/repository/github/ynop/audiomate", "api_url": "https://rseng.github.io/software/api/repos/github/ynop/audiomate"}, {"uid": "github/instituteofmechanics/paraqus", "html_url": "https://rseng.github.io/software/repository/github/instituteofmechanics/paraqus", "api_url": "https://rseng.github.io/software/api/repos/github/instituteofmechanics/paraqus"}, {"uid": "github/floodlight-sports/floodlight", "html_url": "https://rseng.github.io/software/repository/github/floodlight-sports/floodlight", "api_url": "https://rseng.github.io/software/api/repos/github/floodlight-sports/floodlight"}, {"uid": "github/macs3-project/MACS", "html_url": "https://rseng.github.io/software/repository/github/macs3-project/MACS", "api_url": "https://rseng.github.io/software/api/repos/github/macs3-project/MACS"}, {"uid": "github/s-abbas/robnptests", "html_url": "https://rseng.github.io/software/repository/github/s-abbas/robnptests", "api_url": "https://rseng.github.io/software/api/repos/github/s-abbas/robnptests"}, {"uid": "github/eWaterCycle/grpc4bmi", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/grpc4bmi", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/grpc4bmi"}, {"uid": "github/eWaterCycle/setup-singularity", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-singularity", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-singularity"}, {"uid": "github/eWaterCycle/jupyterlab_thredds", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/jupyterlab_thredds", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/jupyterlab_thredds"}, {"uid": "github/eWaterCycle/Cesium-NcWMS", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/Cesium-NcWMS", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/Cesium-NcWMS"}, {"uid": "github/eWaterCycle/experiment-launcher", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/experiment-launcher", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/experiment-launcher"}, {"uid": "github/eWaterCycle/ewatercycle", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/ewatercycle", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/ewatercycle"}, {"uid": "github/eWaterCycle/eWaterleaf", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/eWaterleaf", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/eWaterleaf"}, {"uid": "github/eWaterCycle/setup-grpc", "html_url": "https://rseng.github.io/software/repository/github/eWaterCycle/setup-grpc", "api_url": "https://rseng.github.io/software/api/repos/github/eWaterCycle/setup-grpc"}, {"uid": "github/EliseJ/superabc", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/superabc", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/superabc"}, {"uid": "github/EliseJ/astroABC", "html_url": "https://rseng.github.io/software/repository/github/EliseJ/astroABC", "api_url": "https://rseng.github.io/software/api/repos/github/EliseJ/astroABC"}, {"uid": "github/jakeret/abcpmc", "html_url": "https://rseng.github.io/software/repository/github/jakeret/abcpmc", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/abcpmc"}, {"uid": "github/jakeret/tf_unet", "html_url": "https://rseng.github.io/software/repository/github/jakeret/tf_unet", "api_url": "https://rseng.github.io/software/api/repos/github/jakeret/tf_unet"}, {"uid": "github/czbiohub/cerebra", "html_url": "https://rseng.github.io/software/repository/github/czbiohub/cerebra", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub/cerebra"}, {"uid": "github/bricoletc/delfies", "html_url": "https://rseng.github.io/software/repository/github/bricoletc/delfies", "api_url": "https://rseng.github.io/software/api/repos/github/bricoletc/delfies"}, {"uid": "github/myfang2021/VIPPID", "html_url": "https://rseng.github.io/software/repository/github/myfang2021/VIPPID", "api_url": "https://rseng.github.io/software/api/repos/github/myfang2021/VIPPID"}, {"uid": "github/lantunes/cellpylib", "html_url": "https://rseng.github.io/software/repository/github/lantunes/cellpylib", "api_url": "https://rseng.github.io/software/api/repos/github/lantunes/cellpylib"}, {"uid": "github/mtsch/Ripserer.jl", "html_url": "https://rseng.github.io/software/repository/github/mtsch/Ripserer.jl", "api_url": "https://rseng.github.io/software/api/repos/github/mtsch/Ripserer.jl"}, {"uid": "github/astronomical-data-processing/RAPP", "html_url": "https://rseng.github.io/software/repository/github/astronomical-data-processing/RAPP", "api_url": "https://rseng.github.io/software/api/repos/github/astronomical-data-processing/RAPP"}, {"uid": "github/vatlab/sos-notebook", "html_url": "https://rseng.github.io/software/repository/github/vatlab/sos-notebook", "api_url": "https://rseng.github.io/software/api/repos/github/vatlab/sos-notebook"}, {"uid": "github/cgre-aachen/gemgis", "html_url": "https://rseng.github.io/software/repository/github/cgre-aachen/gemgis", "api_url": "https://rseng.github.io/software/api/repos/github/cgre-aachen/gemgis"}, {"uid": "github/muLAn-project/muLAn", "html_url": "https://rseng.github.io/software/repository/github/muLAn-project/muLAn", "api_url": "https://rseng.github.io/software/api/repos/github/muLAn-project/muLAn"}, {"uid": "github/dmey/synthia", "html_url": "https://rseng.github.io/software/repository/github/dmey/synthia", "api_url": "https://rseng.github.io/software/api/repos/github/dmey/synthia"}, {"uid": "github/kblin/ncbi-acc-download", "html_url": "https://rseng.github.io/software/repository/github/kblin/ncbi-acc-download", "api_url": "https://rseng.github.io/software/api/repos/github/kblin/ncbi-acc-download"}, {"uid": "github/HillLab/SomaticSiMu", "html_url": "https://rseng.github.io/software/repository/github/HillLab/SomaticSiMu", "api_url": "https://rseng.github.io/software/api/repos/github/HillLab/SomaticSiMu"}, {"uid": "github/SMTG-Bham/ThermoParser", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/ThermoParser", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/ThermoParser"}, {"uid": "github/SMTG-Bham/doped", "html_url": "https://rseng.github.io/software/repository/github/SMTG-Bham/doped", "api_url": "https://rseng.github.io/software/api/repos/github/SMTG-Bham/doped"}, {"uid": "github/cuDisc/cuDisc", "html_url": "https://rseng.github.io/software/repository/github/cuDisc/cuDisc", "api_url": "https://rseng.github.io/software/api/repos/github/cuDisc/cuDisc"}, {"uid": "github/heliopython/heliopy", "html_url": "https://rseng.github.io/software/repository/github/heliopython/heliopy", "api_url": "https://rseng.github.io/software/api/repos/github/heliopython/heliopy"}, {"uid": "github/mtazzari/galario", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/galario", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/galario"}, {"uid": "github/mtazzari/uvplot", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/uvplot", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/uvplot"}, {"uid": "github/mtazzari/binary", "html_url": "https://rseng.github.io/software/repository/github/mtazzari/binary", "api_url": "https://rseng.github.io/software/api/repos/github/mtazzari/binary"}, {"uid": "github/LangeLab/SQuAPP", "html_url": "https://rseng.github.io/software/repository/github/LangeLab/SQuAPP", "api_url": "https://rseng.github.io/software/api/repos/github/LangeLab/SQuAPP"}, {"uid": "github/heracles-ec/heracles", "html_url": "https://rseng.github.io/software/repository/github/heracles-ec/heracles", "api_url": "https://rseng.github.io/software/api/repos/github/heracles-ec/heracles"}, {"uid": "github/mattyowl/fitScalingRelation", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/fitScalingRelation", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/fitScalingRelation"}, {"uid": "github/mattyowl/astLib", "html_url": "https://rseng.github.io/software/repository/github/mattyowl/astLib", "api_url": "https://rseng.github.io/software/api/repos/github/mattyowl/astLib"}, {"uid": "github/MichaelCretignier/Rassine_public", "html_url": "https://rseng.github.io/software/repository/github/MichaelCretignier/Rassine_public", "api_url": "https://rseng.github.io/software/api/repos/github/MichaelCretignier/Rassine_public"}, {"uid": "github/chembl/EnsembleFlex", "html_url": "https://rseng.github.io/software/repository/github/chembl/EnsembleFlex", "api_url": "https://rseng.github.io/software/api/repos/github/chembl/EnsembleFlex"}, {"uid": "github/siavash-saki/tesspy", "html_url": "https://rseng.github.io/software/repository/github/siavash-saki/tesspy", "api_url": "https://rseng.github.io/software/api/repos/github/siavash-saki/tesspy"}, {"uid": "github/comprna/reorientexpress", "html_url": "https://rseng.github.io/software/repository/github/comprna/reorientexpress", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/reorientexpress"}, {"uid": "github/comprna/SUPPA", "html_url": "https://rseng.github.io/software/repository/github/comprna/SUPPA", "api_url": "https://rseng.github.io/software/api/repos/github/comprna/SUPPA"}, {"uid": "github/fAndreuzzi/BisPy", "html_url": "https://rseng.github.io/software/repository/github/fAndreuzzi/BisPy", "api_url": "https://rseng.github.io/software/api/repos/github/fAndreuzzi/BisPy"}, {"uid": "github/IMS-MAXIMS/openMAXIMS", "html_url": "https://rseng.github.io/software/repository/github/IMS-MAXIMS/openMAXIMS", "api_url": "https://rseng.github.io/software/api/repos/github/IMS-MAXIMS/openMAXIMS"}, {"uid": "github/stefanhiemer/topoptlab", "html_url": "https://rseng.github.io/software/repository/github/stefanhiemer/topoptlab", "api_url": "https://rseng.github.io/software/api/repos/github/stefanhiemer/topoptlab"}, {"uid": "github/bwa-mem2/bwa-mem2", "html_url": "https://rseng.github.io/software/repository/github/bwa-mem2/bwa-mem2", "api_url": "https://rseng.github.io/software/api/repos/github/bwa-mem2/bwa-mem2"}, {"uid": "github/mattevs24/reyna", "html_url": "https://rseng.github.io/software/repository/github/mattevs24/reyna", "api_url": "https://rseng.github.io/software/api/repos/github/mattevs24/reyna"}, {"uid": "github/simon-prunet/defringe", "html_url": "https://rseng.github.io/software/repository/github/simon-prunet/defringe", "api_url": "https://rseng.github.io/software/api/repos/github/simon-prunet/defringe"}, {"uid": "github/Ecogenomics/GTDBTk", "html_url": "https://rseng.github.io/software/repository/github/Ecogenomics/GTDBTk", "api_url": "https://rseng.github.io/software/api/repos/github/Ecogenomics/GTDBTk"}, {"uid": "github/cmoestl/3DCORE", "html_url": "https://rseng.github.io/software/repository/github/cmoestl/3DCORE", "api_url": "https://rseng.github.io/software/api/repos/github/cmoestl/3DCORE"}, {"uid": "github/Gaius-Augustus/BRAKER", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/BRAKER", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/BRAKER"}, {"uid": "github/Gaius-Augustus/Tiberius", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/Tiberius", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/Tiberius"}, {"uid": "github/Gaius-Augustus/GALBA", "html_url": "https://rseng.github.io/software/repository/github/Gaius-Augustus/GALBA", "api_url": "https://rseng.github.io/software/api/repos/github/Gaius-Augustus/GALBA"}, {"uid": "github/raufs/skDER", "html_url": "https://rseng.github.io/software/repository/github/raufs/skDER", "api_url": "https://rseng.github.io/software/api/repos/github/raufs/skDER"}, {"uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", "html_url": "https://rseng.github.io/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", "api_url": "https://rseng.github.io/software/api/repos/github/BDI-pathogens/OpenABM-Covid19-model-paper"}, {"uid": "github/ejmackrell/tidyproteomics-interactive", "html_url": "https://rseng.github.io/software/repository/github/ejmackrell/tidyproteomics-interactive", "api_url": "https://rseng.github.io/software/api/repos/github/ejmackrell/tidyproteomics-interactive"}, {"uid": "github/ajwheeler/korg.jl", "html_url": "https://rseng.github.io/software/repository/github/ajwheeler/korg.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ajwheeler/korg.jl"}, {"uid": "github/AndreaCaldiroli/ATES-Code", "html_url": "https://rseng.github.io/software/repository/github/AndreaCaldiroli/ATES-Code", "api_url": "https://rseng.github.io/software/api/repos/github/AndreaCaldiroli/ATES-Code"}, {"uid": "github/BioGenies/AMPBenchmark", "html_url": "https://rseng.github.io/software/repository/github/BioGenies/AMPBenchmark", "api_url": "https://rseng.github.io/software/api/repos/github/BioGenies/AMPBenchmark"}, {"uid": "github/elliohow/fMRI_ROI_Analysis_Tool", "html_url": "https://rseng.github.io/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", "api_url": "https://rseng.github.io/software/api/repos/github/elliohow/fMRI_ROI_Analysis_Tool"}, {"uid": "github/chaoliu-cl/textAnnotatoR", "html_url": "https://rseng.github.io/software/repository/github/chaoliu-cl/textAnnotatoR", "api_url": "https://rseng.github.io/software/api/repos/github/chaoliu-cl/textAnnotatoR"}, {"uid": "github/cau-se/ARCHES-PiCar-X", "html_url": "https://rseng.github.io/software/repository/github/cau-se/ARCHES-PiCar-X", "api_url": "https://rseng.github.io/software/api/repos/github/cau-se/ARCHES-PiCar-X"}, {"uid": "github/Exo-MerCat/Exo-MerCat", "html_url": "https://rseng.github.io/software/repository/github/Exo-MerCat/Exo-MerCat", "api_url": "https://rseng.github.io/software/api/repos/github/Exo-MerCat/Exo-MerCat"}, {"uid": "github/LQYoLH/CnnCrispr", "html_url": "https://rseng.github.io/software/repository/github/LQYoLH/CnnCrispr", "api_url": "https://rseng.github.io/software/api/repos/github/LQYoLH/CnnCrispr"}, {"uid": "github/poldracklab/nitransforms", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/nitransforms", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/nitransforms"}, {"uid": "github/poldracklab/mriqc", "html_url": "https://rseng.github.io/software/repository/github/poldracklab/mriqc", "api_url": "https://rseng.github.io/software/api/repos/github/poldracklab/mriqc"}, {"uid": "github/tacazares/SeedMatchR", "html_url": "https://rseng.github.io/software/repository/github/tacazares/SeedMatchR", "api_url": "https://rseng.github.io/software/api/repos/github/tacazares/SeedMatchR"}, {"uid": "github/wadpac/GGIR", "html_url": "https://rseng.github.io/software/repository/github/wadpac/GGIR", "api_url": "https://rseng.github.io/software/api/repos/github/wadpac/GGIR"}, {"uid": "github/Merck/pkglite", "html_url": "https://rseng.github.io/software/repository/github/Merck/pkglite", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/pkglite"}, {"uid": "github/Merck/BioPhi", "html_url": "https://rseng.github.io/software/repository/github/Merck/BioPhi", "api_url": "https://rseng.github.io/software/api/repos/github/Merck/BioPhi"}, {"uid": "github/3d-pli/fastpli", "html_url": "https://rseng.github.io/software/repository/github/3d-pli/fastpli", "api_url": "https://rseng.github.io/software/api/repos/github/3d-pli/fastpli"}, {"uid": "github/cupy/cupy", "html_url": "https://rseng.github.io/software/repository/github/cupy/cupy", "api_url": "https://rseng.github.io/software/api/repos/github/cupy/cupy"}, {"uid": "github/APGG-Lab/APGG", "html_url": "https://rseng.github.io/software/repository/github/APGG-Lab/APGG", "api_url": "https://rseng.github.io/software/api/repos/github/APGG-Lab/APGG"}, {"uid": "github/SunilAnandatheertha/PXO", "html_url": "https://rseng.github.io/software/repository/github/SunilAnandatheertha/PXO", "api_url": "https://rseng.github.io/software/api/repos/github/SunilAnandatheertha/PXO"}, {"uid": "github/gevaertlab/DUNE", "html_url": "https://rseng.github.io/software/repository/github/gevaertlab/DUNE", "api_url": "https://rseng.github.io/software/api/repos/github/gevaertlab/DUNE"}, {"uid": "github/dipto4/falcon_dm", "html_url": "https://rseng.github.io/software/repository/github/dipto4/falcon_dm", "api_url": "https://rseng.github.io/software/api/repos/github/dipto4/falcon_dm"}, {"uid": "github/ruiying-ocean/cgeniepy", "html_url": "https://rseng.github.io/software/repository/github/ruiying-ocean/cgeniepy", "api_url": "https://rseng.github.io/software/api/repos/github/ruiying-ocean/cgeniepy"}, {"uid": "github/seshnadathur/Revolver", "html_url": "https://rseng.github.io/software/repository/github/seshnadathur/Revolver", "api_url": "https://rseng.github.io/software/api/repos/github/seshnadathur/Revolver"}, {"uid": "github/mgckind/SparsePz", "html_url": "https://rseng.github.io/software/repository/github/mgckind/SparsePz", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/SparsePz"}, {"uid": "github/mgckind/easyaccess", "html_url": "https://rseng.github.io/software/repository/github/mgckind/easyaccess", "api_url": "https://rseng.github.io/software/api/repos/github/mgckind/easyaccess"}, {"uid": "github/noraeisner/LATTE", "html_url": "https://rseng.github.io/software/repository/github/noraeisner/LATTE", "api_url": "https://rseng.github.io/software/api/repos/github/noraeisner/LATTE"}, {"uid": "github/avapolzin/spike", "html_url": "https://rseng.github.io/software/repository/github/avapolzin/spike", "api_url": "https://rseng.github.io/software/api/repos/github/avapolzin/spike"}, {"uid": "github/RamanLab/iCOMIC", "html_url": "https://rseng.github.io/software/repository/github/RamanLab/iCOMIC", "api_url": "https://rseng.github.io/software/api/repos/github/RamanLab/iCOMIC"}, {"uid": "github/mrirecon/bart", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/bart", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/bart"}, {"uid": "github/mrirecon/view", "html_url": "https://rseng.github.io/software/repository/github/mrirecon/view", "api_url": "https://rseng.github.io/software/api/repos/github/mrirecon/view"}, {"uid": "github/shenwei356/unikmer", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/unikmer", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/unikmer"}, {"uid": "github/shenwei356/kmcp", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/kmcp", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/kmcp"}, {"uid": "github/shenwei356/csvtk", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/csvtk", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/csvtk"}, {"uid": "github/shenwei356/seqkit", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/seqkit", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/seqkit"}, {"uid": "github/shenwei356/LexicMap", "html_url": "https://rseng.github.io/software/repository/github/shenwei356/LexicMap", "api_url": "https://rseng.github.io/software/api/repos/github/shenwei356/LexicMap"}, {"uid": "github/autotwin/automesh", "html_url": "https://rseng.github.io/software/repository/github/autotwin/automesh", "api_url": "https://rseng.github.io/software/api/repos/github/autotwin/automesh"}, {"uid": "github/JoschaJ/mockFRBhosts", "html_url": "https://rseng.github.io/software/repository/github/JoschaJ/mockFRBhosts", "api_url": "https://rseng.github.io/software/api/repos/github/JoschaJ/mockFRBhosts"}, {"uid": "github/biofold/ddgun", "html_url": "https://rseng.github.io/software/repository/github/biofold/ddgun", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/ddgun"}, {"uid": "github/biofold/PhD-SNPg", "html_url": "https://rseng.github.io/software/repository/github/biofold/PhD-SNPg", "api_url": "https://rseng.github.io/software/api/repos/github/biofold/PhD-SNPg"}, {"uid": "github/sonoUnoTeam/sonoUno-desktop", "html_url": "https://rseng.github.io/software/repository/github/sonoUnoTeam/sonoUno-desktop", "api_url": "https://rseng.github.io/software/api/repos/github/sonoUnoTeam/sonoUno-desktop"}, {"uid": "github/maickrau/GraphAligner", "html_url": "https://rseng.github.io/software/repository/github/maickrau/GraphAligner", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/GraphAligner"}, {"uid": "github/maickrau/MBG", "html_url": "https://rseng.github.io/software/repository/github/maickrau/MBG", "api_url": "https://rseng.github.io/software/api/repos/github/maickrau/MBG"}, {"uid": "github/vpc-ccg/calib", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/calib", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/calib"}, {"uid": "github/vpc-ccg/svict", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/svict", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/svict"}, {"uid": "github/vpc-ccg/genion", "html_url": "https://rseng.github.io/software/repository/github/vpc-ccg/genion", "api_url": "https://rseng.github.io/software/api/repos/github/vpc-ccg/genion"}, {"uid": "github/olivecha/guitarsounds", "html_url": "https://rseng.github.io/software/repository/github/olivecha/guitarsounds", "api_url": "https://rseng.github.io/software/api/repos/github/olivecha/guitarsounds"}, {"uid": "github/karel-brinda/ococo", "html_url": "https://rseng.github.io/software/repository/github/karel-brinda/ococo", "api_url": "https://rseng.github.io/software/api/repos/github/karel-brinda/ococo"}, {"uid": "github/JoshSchramm94/validateHOT", "html_url": "https://rseng.github.io/software/repository/github/JoshSchramm94/validateHOT", "api_url": "https://rseng.github.io/software/api/repos/github/JoshSchramm94/validateHOT"}, {"uid": "github/m2aia/pym2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/pym2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/pym2aia"}, {"uid": "github/m2aia/m2aia", "html_url": "https://rseng.github.io/software/repository/github/m2aia/m2aia", "api_url": "https://rseng.github.io/software/api/repos/github/m2aia/m2aia"}, {"uid": "github/MREYE-LUMC/ZOSPy", "html_url": "https://rseng.github.io/software/repository/github/MREYE-LUMC/ZOSPy", "api_url": "https://rseng.github.io/software/api/repos/github/MREYE-LUMC/ZOSPy"}, {"uid": "github/jts/sga", "html_url": "https://rseng.github.io/software/repository/github/jts/sga", "api_url": "https://rseng.github.io/software/api/repos/github/jts/sga"}, {"uid": "github/jts/nanopolish", "html_url": "https://rseng.github.io/software/repository/github/jts/nanopolish", "api_url": "https://rseng.github.io/software/api/repos/github/jts/nanopolish"}, {"uid": "github/YuRui8879/MRASleepNet", "html_url": "https://rseng.github.io/software/repository/github/YuRui8879/MRASleepNet", "api_url": "https://rseng.github.io/software/api/repos/github/YuRui8879/MRASleepNet"}, {"uid": "github/linbox-team/linbox", "html_url": "https://rseng.github.io/software/repository/github/linbox-team/linbox", "api_url": "https://rseng.github.io/software/api/repos/github/linbox-team/linbox"}, {"uid": "github/inducer/modepy", "html_url": "https://rseng.github.io/software/repository/github/inducer/modepy", "api_url": "https://rseng.github.io/software/api/repos/github/inducer/modepy"}, {"uid": "github/kpicteam/kpic_pipeline", "html_url": "https://rseng.github.io/software/repository/github/kpicteam/kpic_pipeline", "api_url": "https://rseng.github.io/software/api/repos/github/kpicteam/kpic_pipeline"}, {"uid": "github/minzastro/unidam", "html_url": "https://rseng.github.io/software/repository/github/minzastro/unidam", "api_url": "https://rseng.github.io/software/api/repos/github/minzastro/unidam"}, {"uid": "github/galaxy001/pirs", "html_url": "https://rseng.github.io/software/repository/github/galaxy001/pirs", "api_url": "https://rseng.github.io/software/api/repos/github/galaxy001/pirs"}, {"uid": "github/mackelab/sbi", "html_url": "https://rseng.github.io/software/repository/github/mackelab/sbi", "api_url": "https://rseng.github.io/software/api/repos/github/mackelab/sbi"}, {"uid": "github/Weeks-UNC/RingMapper", "html_url": "https://rseng.github.io/software/repository/github/Weeks-UNC/RingMapper", "api_url": "https://rseng.github.io/software/api/repos/github/Weeks-UNC/RingMapper"}, {"uid": "github/cbml-forth/eucaim_wizard_tool", "html_url": "https://rseng.github.io/software/repository/github/cbml-forth/eucaim_wizard_tool", "api_url": "https://rseng.github.io/software/api/repos/github/cbml-forth/eucaim_wizard_tool"}, {"uid": "github/xychcz/S3Fit", "html_url": "https://rseng.github.io/software/repository/github/xychcz/S3Fit", "api_url": "https://rseng.github.io/software/api/repos/github/xychcz/S3Fit"}, {"uid": "github/Sheng-Qi-Yang/HIILines", "html_url": "https://rseng.github.io/software/repository/github/Sheng-Qi-Yang/HIILines", "api_url": "https://rseng.github.io/software/api/repos/github/Sheng-Qi-Yang/HIILines"}, {"uid": "github/soraxas/sbp-env", "html_url": "https://rseng.github.io/software/repository/github/soraxas/sbp-env", "api_url": "https://rseng.github.io/software/api/repos/github/soraxas/sbp-env"}, {"uid": "github/dtcc-platform/dtcc-builder", "html_url": "https://rseng.github.io/software/repository/github/dtcc-platform/dtcc-builder", "api_url": "https://rseng.github.io/software/api/repos/github/dtcc-platform/dtcc-builder"}, {"uid": "github/ttgump/scDeepCluster_pytorch", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDeepCluster_pytorch", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDeepCluster_pytorch"}, {"uid": "github/ttgump/scDHMap", "html_url": "https://rseng.github.io/software/repository/github/ttgump/scDHMap", "api_url": "https://rseng.github.io/software/api/repos/github/ttgump/scDHMap"}, {"uid": "github/RudolfCardinal/camcops", "html_url": "https://rseng.github.io/software/repository/github/RudolfCardinal/camcops", "api_url": "https://rseng.github.io/software/api/repos/github/RudolfCardinal/camcops"}, {"uid": "github/federicomarulli/CosmoBolognaLib", "html_url": "https://rseng.github.io/software/repository/github/federicomarulli/CosmoBolognaLib", "api_url": "https://rseng.github.io/software/api/repos/github/federicomarulli/CosmoBolognaLib"}, {"uid": "github/Leo-Simpson/c-lasso", "html_url": "https://rseng.github.io/software/repository/github/Leo-Simpson/c-lasso", "api_url": "https://rseng.github.io/software/api/repos/github/Leo-Simpson/c-lasso"}, {"uid": "github/lnscan/mitoSplitter", "html_url": "https://rseng.github.io/software/repository/github/lnscan/mitoSplitter", "api_url": "https://rseng.github.io/software/api/repos/github/lnscan/mitoSplitter"}, {"uid": "github/nespinoza/exonailer", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/exonailer", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/exonailer"}, {"uid": "github/nespinoza/limb-darkening", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/limb-darkening", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/limb-darkening"}, {"uid": "github/nespinoza/juliet", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/juliet", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/juliet"}, {"uid": "github/nespinoza/mc-spam", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/mc-spam", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/mc-spam"}, {"uid": "github/nespinoza/ld-exosim", "html_url": "https://rseng.github.io/software/repository/github/nespinoza/ld-exosim", "api_url": "https://rseng.github.io/software/api/repos/github/nespinoza/ld-exosim"}, {"uid": "github/statistical-thinking/KI.ENNA", "html_url": "https://rseng.github.io/software/repository/github/statistical-thinking/KI.ENNA", "api_url": "https://rseng.github.io/software/api/repos/github/statistical-thinking/KI.ENNA"}, {"uid": "github/migueldvb/cine", "html_url": "https://rseng.github.io/software/repository/github/migueldvb/cine", "api_url": "https://rseng.github.io/software/api/repos/github/migueldvb/cine"}, {"uid": "github/vavrines/Kinetic.jl", "html_url": "https://rseng.github.io/software/repository/github/vavrines/Kinetic.jl", "api_url": "https://rseng.github.io/software/api/repos/github/vavrines/Kinetic.jl"}, {"uid": "github/daniel-muthukrishna/astrodash", "html_url": "https://rseng.github.io/software/repository/github/daniel-muthukrishna/astrodash", "api_url": "https://rseng.github.io/software/api/repos/github/daniel-muthukrishna/astrodash"}, {"uid": "github/EliabCanul/nauyaca", "html_url": "https://rseng.github.io/software/repository/github/EliabCanul/nauyaca", "api_url": "https://rseng.github.io/software/api/repos/github/EliabCanul/nauyaca"}, {"uid": "github/carlodev/SyntheticEddyMethod.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SyntheticEddyMethod.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SyntheticEddyMethod.jl"}, {"uid": "github/carlodev/SegregatedVMSSolver.jl", "html_url": "https://rseng.github.io/software/repository/github/carlodev/SegregatedVMSSolver.jl", "api_url": "https://rseng.github.io/software/api/repos/github/carlodev/SegregatedVMSSolver.jl"}, {"uid": "github/KopalliV/Benchmarking_graph_pipelines", "html_url": "https://rseng.github.io/software/repository/github/KopalliV/Benchmarking_graph_pipelines", "api_url": "https://rseng.github.io/software/api/repos/github/KopalliV/Benchmarking_graph_pipelines"}, {"uid": "github/CityU-AIM-Group/HTD", "html_url": "https://rseng.github.io/software/repository/github/CityU-AIM-Group/HTD", "api_url": "https://rseng.github.io/software/api/repos/github/CityU-AIM-Group/HTD"}, {"uid": "github/yjx1217/RecombineX", "html_url": "https://rseng.github.io/software/repository/github/yjx1217/RecombineX", "api_url": "https://rseng.github.io/software/api/repos/github/yjx1217/RecombineX"}, {"uid": "github/healytwin1/HISS", "html_url": "https://rseng.github.io/software/repository/github/healytwin1/HISS", "api_url": "https://rseng.github.io/software/api/repos/github/healytwin1/HISS"}, {"uid": "github/choosehappy/HoverFast", "html_url": "https://rseng.github.io/software/repository/github/choosehappy/HoverFast", "api_url": "https://rseng.github.io/software/api/repos/github/choosehappy/HoverFast"}, {"uid": "github/PanKonstantinos/MEvA-X", "html_url": "https://rseng.github.io/software/repository/github/PanKonstantinos/MEvA-X", "api_url": "https://rseng.github.io/software/api/repos/github/PanKonstantinos/MEvA-X"}, {"uid": "github/adamjermyn/Skye", "html_url": "https://rseng.github.io/software/repository/github/adamjermyn/Skye", "api_url": "https://rseng.github.io/software/api/repos/github/adamjermyn/Skye"}, {"uid": "github/jfwallin/JSPAM", "html_url": "https://rseng.github.io/software/repository/github/jfwallin/JSPAM", "api_url": "https://rseng.github.io/software/api/repos/github/jfwallin/JSPAM"}, {"uid": "github/clawpack/pyclaw", "html_url": "https://rseng.github.io/software/repository/github/clawpack/pyclaw", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/pyclaw"}, {"uid": "github/clawpack/clawpack", "html_url": "https://rseng.github.io/software/repository/github/clawpack/clawpack", "api_url": "https://rseng.github.io/software/api/repos/github/clawpack/clawpack"}, {"uid": "github/mirapy-org/mirapy", "html_url": "https://rseng.github.io/software/repository/github/mirapy-org/mirapy", "api_url": "https://rseng.github.io/software/api/repos/github/mirapy-org/mirapy"}, {"uid": "github/abeelen/powspec", "html_url": "https://rseng.github.io/software/repository/github/abeelen/powspec", "api_url": "https://rseng.github.io/software/api/repos/github/abeelen/powspec"}, {"uid": "github/shankarpandala/lazypredict", "html_url": "https://rseng.github.io/software/repository/github/shankarpandala/lazypredict", "api_url": "https://rseng.github.io/software/api/repos/github/shankarpandala/lazypredict"}, {"uid": "github/hemanthpruthvi/PyAstroPol", "html_url": "https://rseng.github.io/software/repository/github/hemanthpruthvi/PyAstroPol", "api_url": "https://rseng.github.io/software/api/repos/github/hemanthpruthvi/PyAstroPol"}, {"uid": "github/jbrakensiek/CORBITS", "html_url": "https://rseng.github.io/software/repository/github/jbrakensiek/CORBITS", "api_url": "https://rseng.github.io/software/api/repos/github/jbrakensiek/CORBITS"}, {"uid": "github/guangtunbenzhu/NonnegMFPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/NonnegMFPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/NonnegMFPy"}, {"uid": "github/guangtunbenzhu/SetCoverPy", "html_url": "https://rseng.github.io/software/repository/github/guangtunbenzhu/SetCoverPy", "api_url": "https://rseng.github.io/software/api/repos/github/guangtunbenzhu/SetCoverPy"}, {"uid": "github/wm75/vaporup", "html_url": "https://rseng.github.io/software/repository/github/wm75/vaporup", "api_url": "https://rseng.github.io/software/api/repos/github/wm75/vaporup"}, {"uid": "github/codemeleon/seqPanther", "html_url": "https://rseng.github.io/software/repository/github/codemeleon/seqPanther", "api_url": "https://rseng.github.io/software/api/repos/github/codemeleon/seqPanther"}, {"uid": "github/FridleyLab/spatialGE", "html_url": "https://rseng.github.io/software/repository/github/FridleyLab/spatialGE", "api_url": "https://rseng.github.io/software/api/repos/github/FridleyLab/spatialGE"}, {"uid": "github/magnuspalmblad/navpa", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/navpa", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/navpa"}, {"uid": "github/magnuspalmblad/shic", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/shic", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/shic"}, {"uid": "github/magnuspalmblad/averageRegions", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/averageRegions", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/averageRegions"}, {"uid": "github/magnuspalmblad/addFeatures", "html_url": "https://rseng.github.io/software/repository/github/magnuspalmblad/addFeatures", "api_url": "https://rseng.github.io/software/api/repos/github/magnuspalmblad/addFeatures"}, {"uid": "github/bareid/cosmoxi2d", "html_url": "https://rseng.github.io/software/repository/github/bareid/cosmoxi2d", "api_url": "https://rseng.github.io/software/api/repos/github/bareid/cosmoxi2d"}, {"uid": "github/pavanvyn/triple-stability", "html_url": "https://rseng.github.io/software/repository/github/pavanvyn/triple-stability", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvyn/triple-stability"}, {"uid": "github/sharmalab/eaglescope", "html_url": "https://rseng.github.io/software/repository/github/sharmalab/eaglescope", "api_url": "https://rseng.github.io/software/api/repos/github/sharmalab/eaglescope"}, {"uid": "github/anugrahjo/PySLSQP", "html_url": "https://rseng.github.io/software/repository/github/anugrahjo/PySLSQP", "api_url": "https://rseng.github.io/software/api/repos/github/anugrahjo/PySLSQP"}, {"uid": "github/nonlocalmodels/NLMech", "html_url": "https://rseng.github.io/software/repository/github/nonlocalmodels/NLMech", "api_url": "https://rseng.github.io/software/api/repos/github/nonlocalmodels/NLMech"}, {"uid": "github/supsi-dacd-isaac/BayesReconPy", "html_url": "https://rseng.github.io/software/repository/github/supsi-dacd-isaac/BayesReconPy", "api_url": "https://rseng.github.io/software/api/repos/github/supsi-dacd-isaac/BayesReconPy"}, {"uid": "github/aothmane-control/Algebraic-differentiators", "html_url": "https://rseng.github.io/software/repository/github/aothmane-control/Algebraic-differentiators", "api_url": "https://rseng.github.io/software/api/repos/github/aothmane-control/Algebraic-differentiators"}, {"uid": "github/HalHaggard/EARL", "html_url": "https://rseng.github.io/software/repository/github/HalHaggard/EARL", "api_url": "https://rseng.github.io/software/api/repos/github/HalHaggard/EARL"}, {"uid": "github/Valires/er-evaluation", "html_url": "https://rseng.github.io/software/repository/github/Valires/er-evaluation", "api_url": "https://rseng.github.io/software/api/repos/github/Valires/er-evaluation"}, {"uid": "github/synchrofit/synchrofit", "html_url": "https://rseng.github.io/software/repository/github/synchrofit/synchrofit", "api_url": "https://rseng.github.io/software/api/repos/github/synchrofit/synchrofit"}, {"uid": "github/jakelangham/kestrel", "html_url": "https://rseng.github.io/software/repository/github/jakelangham/kestrel", "api_url": "https://rseng.github.io/software/api/repos/github/jakelangham/kestrel"}, {"uid": "github/yfperezg/frisbhee", "html_url": "https://rseng.github.io/software/repository/github/yfperezg/frisbhee", "api_url": "https://rseng.github.io/software/api/repos/github/yfperezg/frisbhee"}, {"uid": "github/glue-viz/glue", "html_url": "https://rseng.github.io/software/repository/github/glue-viz/glue", "api_url": "https://rseng.github.io/software/api/repos/github/glue-viz/glue"}, {"uid": "github/gtw2i/GA-Galaxy", "html_url": "https://rseng.github.io/software/repository/github/gtw2i/GA-Galaxy", "api_url": "https://rseng.github.io/software/api/repos/github/gtw2i/GA-Galaxy"}, {"uid": "github/ExoplanetML/Nigraha", "html_url": "https://rseng.github.io/software/repository/github/ExoplanetML/Nigraha", "api_url": "https://rseng.github.io/software/api/repos/github/ExoplanetML/Nigraha"}, {"uid": "github/mahulchak/quickmerge", "html_url": "https://rseng.github.io/software/repository/github/mahulchak/quickmerge", "api_url": "https://rseng.github.io/software/api/repos/github/mahulchak/quickmerge"}, {"uid": "github/adamgayoso/totalVI_reproducibility", "html_url": "https://rseng.github.io/software/repository/github/adamgayoso/totalVI_reproducibility", "api_url": "https://rseng.github.io/software/api/repos/github/adamgayoso/totalVI_reproducibility"}, {"uid": "github/marberts/piar", "html_url": "https://rseng.github.io/software/repository/github/marberts/piar", "api_url": "https://rseng.github.io/software/api/repos/github/marberts/piar"}, {"uid": "github/tesselle/aion", "html_url": "https://rseng.github.io/software/repository/github/tesselle/aion", "api_url": "https://rseng.github.io/software/api/repos/github/tesselle/aion"}, {"uid": "github/Maison-de-la-Simulation/heraclespp", "html_url": "https://rseng.github.io/software/repository/github/Maison-de-la-Simulation/heraclespp", "api_url": "https://rseng.github.io/software/api/repos/github/Maison-de-la-Simulation/heraclespp"}, {"uid": "github/epic-astronomy/EPIC", "html_url": "https://rseng.github.io/software/repository/github/epic-astronomy/EPIC", "api_url": "https://rseng.github.io/software/api/repos/github/epic-astronomy/EPIC"}, {"uid": "github/MarkusPic/intensity_duration_frequency_analysis", "html_url": "https://rseng.github.io/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", "api_url": "https://rseng.github.io/software/api/repos/github/MarkusPic/intensity_duration_frequency_analysis"}, {"uid": "github/BEAST-Fitting/beast", "html_url": "https://rseng.github.io/software/repository/github/BEAST-Fitting/beast", "api_url": "https://rseng.github.io/software/api/repos/github/BEAST-Fitting/beast"}, {"uid": "github/Varnani/pywd2015-qt5", "html_url": "https://rseng.github.io/software/repository/github/Varnani/pywd2015-qt5", "api_url": "https://rseng.github.io/software/api/repos/github/Varnani/pywd2015-qt5"}, {"uid": "github/marcelm/dnaio", "html_url": "https://rseng.github.io/software/repository/github/marcelm/dnaio", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/dnaio"}, {"uid": "github/marcelm/tinyalign", "html_url": "https://rseng.github.io/software/repository/github/marcelm/tinyalign", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/tinyalign"}, {"uid": "github/marcelm/alignlib", "html_url": "https://rseng.github.io/software/repository/github/marcelm/alignlib", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/alignlib"}, {"uid": "github/marcelm/cutadapt", "html_url": "https://rseng.github.io/software/repository/github/marcelm/cutadapt", "api_url": "https://rseng.github.io/software/api/repos/github/marcelm/cutadapt"}, {"uid": "github/KiranLDA/PAMLr", "html_url": "https://rseng.github.io/software/repository/github/KiranLDA/PAMLr", "api_url": "https://rseng.github.io/software/api/repos/github/KiranLDA/PAMLr"}, {"uid": "github/sanctuuary/ape", "html_url": "https://rseng.github.io/software/repository/github/sanctuuary/ape", "api_url": "https://rseng.github.io/software/api/repos/github/sanctuuary/ape"}, {"uid": "github/linDing-groups/Deep-4mCW2V", "html_url": "https://rseng.github.io/software/repository/github/linDing-groups/Deep-4mCW2V", "api_url": "https://rseng.github.io/software/api/repos/github/linDing-groups/Deep-4mCW2V"}, {"uid": "github/EMBL-Hentze-group/htseq-clip", "html_url": "https://rseng.github.io/software/repository/github/EMBL-Hentze-group/htseq-clip", "api_url": "https://rseng.github.io/software/api/repos/github/EMBL-Hentze-group/htseq-clip"}, {"uid": "github/Tarskin/LaCyTools", "html_url": "https://rseng.github.io/software/repository/github/Tarskin/LaCyTools", "api_url": "https://rseng.github.io/software/api/repos/github/Tarskin/LaCyTools"}, {"uid": "github/CompiledAtBirth/pyCARPool", "html_url": "https://rseng.github.io/software/repository/github/CompiledAtBirth/pyCARPool", "api_url": "https://rseng.github.io/software/api/repos/github/CompiledAtBirth/pyCARPool"}, {"uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", "html_url": "https://rseng.github.io/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", "api_url": "https://rseng.github.io/software/api/repos/github/Aarhus-Psychiatry-Research/timeseriesflattener"}, {"uid": "github/ctSkennerton/minced", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/minced", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/minced"}, {"uid": "github/ctSkennerton/crass", "html_url": "https://rseng.github.io/software/repository/github/ctSkennerton/crass", "api_url": "https://rseng.github.io/software/api/repos/github/ctSkennerton/crass"}, {"uid": "github/nabeelre/NIMBLE", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/NIMBLE", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/NIMBLE"}, {"uid": "github/nabeelre/BTSbot", "html_url": "https://rseng.github.io/software/repository/github/nabeelre/BTSbot", "api_url": "https://rseng.github.io/software/api/repos/github/nabeelre/BTSbot"}, {"uid": "github/nyusngroup/pyMCZ", "html_url": "https://rseng.github.io/software/repository/github/nyusngroup/pyMCZ", "api_url": "https://rseng.github.io/software/api/repos/github/nyusngroup/pyMCZ"}, {"uid": "github/niceume/datasailr", "html_url": "https://rseng.github.io/software/repository/github/niceume/datasailr", "api_url": "https://rseng.github.io/software/api/repos/github/niceume/datasailr"}, {"uid": "github/rinikerlab/Ensembler", "html_url": "https://rseng.github.io/software/repository/github/rinikerlab/Ensembler", "api_url": "https://rseng.github.io/software/api/repos/github/rinikerlab/Ensembler"}, {"uid": "github/astrockragh/Mangrove", "html_url": "https://rseng.github.io/software/repository/github/astrockragh/Mangrove", "api_url": "https://rseng.github.io/software/api/repos/github/astrockragh/Mangrove"}, {"uid": "github/hytrac/amber", "html_url": "https://rseng.github.io/software/repository/github/hytrac/amber", "api_url": "https://rseng.github.io/software/api/repos/github/hytrac/amber"}, {"uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TransitionsInTimeseries.jl"}, {"uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/TimeseriesSurrogates.jl"}, {"uid": "github/JuliaDynamics/DrWatson.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaDynamics/DrWatson.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaDynamics/DrWatson.jl"}, {"uid": "github/user29A/fastrometry", "html_url": "https://rseng.github.io/software/repository/github/user29A/fastrometry", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/fastrometry"}, {"uid": "github/user29A/CCDLAB", "html_url": "https://rseng.github.io/software/repository/github/user29A/CCDLAB", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/CCDLAB"}, {"uid": "github/user29A/JPFITS", "html_url": "https://rseng.github.io/software/repository/github/user29A/JPFITS", "api_url": "https://rseng.github.io/software/api/repos/github/user29A/JPFITS"}, {"uid": "github/seap-udea/iWander", "html_url": "https://rseng.github.io/software/repository/github/seap-udea/iWander", "api_url": "https://rseng.github.io/software/api/repos/github/seap-udea/iWander"}, {"uid": "github/valerio-marra/CalPriorSNIa", "html_url": "https://rseng.github.io/software/repository/github/valerio-marra/CalPriorSNIa", "api_url": "https://rseng.github.io/software/api/repos/github/valerio-marra/CalPriorSNIa"}, {"uid": "github/fred3m/toyz", "html_url": "https://rseng.github.io/software/repository/github/fred3m/toyz", "api_url": "https://rseng.github.io/software/api/repos/github/fred3m/toyz"}, {"uid": "github/rudeboybert/forestecology", "html_url": "https://rseng.github.io/software/repository/github/rudeboybert/forestecology", "api_url": "https://rseng.github.io/software/api/repos/github/rudeboybert/forestecology"}, {"uid": "github/CEMeNT-PSAAP/MCDC", "html_url": "https://rseng.github.io/software/repository/github/CEMeNT-PSAAP/MCDC", "api_url": "https://rseng.github.io/software/api/repos/github/CEMeNT-PSAAP/MCDC"}, {"uid": "github/arcaldwell49/SimplyAgree", "html_url": "https://rseng.github.io/software/repository/github/arcaldwell49/SimplyAgree", "api_url": "https://rseng.github.io/software/api/repos/github/arcaldwell49/SimplyAgree"}, {"uid": "github/cosmo-epfl/chemiscope", "html_url": "https://rseng.github.io/software/repository/github/cosmo-epfl/chemiscope", "api_url": "https://rseng.github.io/software/api/repos/github/cosmo-epfl/chemiscope"}, {"uid": "github/marieBvr/virAnnot", "html_url": "https://rseng.github.io/software/repository/github/marieBvr/virAnnot", "api_url": "https://rseng.github.io/software/api/repos/github/marieBvr/virAnnot"}, {"uid": "github/raghuastro/GRIZZLY", "html_url": "https://rseng.github.io/software/repository/github/raghuastro/GRIZZLY", "api_url": "https://rseng.github.io/software/api/repos/github/raghuastro/GRIZZLY"}, {"uid": "github/saigegit/SAIGE", "html_url": "https://rseng.github.io/software/repository/github/saigegit/SAIGE", "api_url": "https://rseng.github.io/software/api/repos/github/saigegit/SAIGE"}, {"uid": "github/hydrosolutions/riversCentralAsia", "html_url": "https://rseng.github.io/software/repository/github/hydrosolutions/riversCentralAsia", "api_url": "https://rseng.github.io/software/api/repos/github/hydrosolutions/riversCentralAsia"}, {"uid": "github/HajkD/LTRpred", "html_url": "https://rseng.github.io/software/repository/github/HajkD/LTRpred", "api_url": "https://rseng.github.io/software/api/repos/github/HajkD/LTRpred"}, {"uid": "github/vallis/mc3pta", "html_url": "https://rseng.github.io/software/repository/github/vallis/mc3pta", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/mc3pta"}, {"uid": "github/vallis/libstempo", "html_url": "https://rseng.github.io/software/repository/github/vallis/libstempo", "api_url": "https://rseng.github.io/software/api/repos/github/vallis/libstempo"}, {"uid": "github/radiocosmology/caput", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/caput", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/caput"}, {"uid": "github/radiocosmology/driftscan", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/driftscan", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/driftscan"}, {"uid": "github/radiocosmology/draco", "html_url": "https://rseng.github.io/software/repository/github/radiocosmology/draco", "api_url": "https://rseng.github.io/software/api/repos/github/radiocosmology/draco"}, {"uid": "github/qiangyicheng/flory", "html_url": "https://rseng.github.io/software/repository/github/qiangyicheng/flory", "api_url": "https://rseng.github.io/software/api/repos/github/qiangyicheng/flory"}, {"uid": "github/osallou/cassiopee-c", "html_url": "https://rseng.github.io/software/repository/github/osallou/cassiopee-c", "api_url": "https://rseng.github.io/software/api/repos/github/osallou/cassiopee-c"}, {"uid": "github/gdrouart/MrMoose", "html_url": "https://rseng.github.io/software/repository/github/gdrouart/MrMoose", "api_url": "https://rseng.github.io/software/api/repos/github/gdrouart/MrMoose"}, {"uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-SimGrid"}, {"uid": "github/DreamCloud-Project/McSim-TLM-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-TLM-NoC"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar"}, {"uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/McSim-Cycle-accurate-NoC"}, {"uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "html_url": "https://rseng.github.io/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", "api_url": "https://rseng.github.io/software/api/repos/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator"}, {"uid": "github/joefarrington/mdpax", "html_url": "https://rseng.github.io/software/repository/github/joefarrington/mdpax", "api_url": "https://rseng.github.io/software/api/repos/github/joefarrington/mdpax"}, {"uid": "github/schlafly/crowdsource", "html_url": "https://rseng.github.io/software/repository/github/schlafly/crowdsource", "api_url": "https://rseng.github.io/software/api/repos/github/schlafly/crowdsource"}, {"uid": "github/GeminiDRSoftware/DRAGONS", "html_url": "https://rseng.github.io/software/repository/github/GeminiDRSoftware/DRAGONS", "api_url": "https://rseng.github.io/software/api/repos/github/GeminiDRSoftware/DRAGONS"}, {"uid": "github/astrocatalogs/astrocats", "html_url": "https://rseng.github.io/software/repository/github/astrocatalogs/astrocats", "api_url": "https://rseng.github.io/software/api/repos/github/astrocatalogs/astrocats"}, {"uid": "github/MichielsenM/FOAM", "html_url": "https://rseng.github.io/software/repository/github/MichielsenM/FOAM", "api_url": "https://rseng.github.io/software/api/repos/github/MichielsenM/FOAM"}, {"uid": "github/AdriaJ/polyclean", "html_url": "https://rseng.github.io/software/repository/github/AdriaJ/polyclean", "api_url": "https://rseng.github.io/software/api/repos/github/AdriaJ/polyclean"}, {"uid": "github/BogdanCiambur/PROFILER", "html_url": "https://rseng.github.io/software/repository/github/BogdanCiambur/PROFILER", "api_url": "https://rseng.github.io/software/api/repos/github/BogdanCiambur/PROFILER"}, {"uid": "github/TheFischerLab/FLEXR", "html_url": "https://rseng.github.io/software/repository/github/TheFischerLab/FLEXR", "api_url": "https://rseng.github.io/software/api/repos/github/TheFischerLab/FLEXR"}, {"uid": "github/Cantera/cantera", "html_url": "https://rseng.github.io/software/repository/github/Cantera/cantera", "api_url": "https://rseng.github.io/software/api/repos/github/Cantera/cantera"}, {"uid": "github/crs4/rocrate-validator", "html_url": "https://rseng.github.io/software/repository/github/crs4/rocrate-validator", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/rocrate-validator"}, {"uid": "github/crs4/life_monitor", "html_url": "https://rseng.github.io/software/repository/github/crs4/life_monitor", "api_url": "https://rseng.github.io/software/api/repos/github/crs4/life_monitor"}, {"uid": "github/PengyiZhang/DRR4Covid", "html_url": "https://rseng.github.io/software/repository/github/PengyiZhang/DRR4Covid", "api_url": "https://rseng.github.io/software/api/repos/github/PengyiZhang/DRR4Covid"}, {"uid": "github/atmos-cloud-sim-uj/PySDM", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PySDM", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PySDM"}, {"uid": "github/atmos-cloud-sim-uj/PyMPDATA", "html_url": "https://rseng.github.io/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", "api_url": "https://rseng.github.io/software/api/repos/github/atmos-cloud-sim-uj/PyMPDATA"}, {"uid": "github/OceanParcels/plasticparcels", "html_url": "https://rseng.github.io/software/repository/github/OceanParcels/plasticparcels", "api_url": "https://rseng.github.io/software/api/repos/github/OceanParcels/plasticparcels"}, {"uid": "github/entangled/entangled", "html_url": "https://rseng.github.io/software/repository/github/entangled/entangled", "api_url": "https://rseng.github.io/software/api/repos/github/entangled/entangled"}, {"uid": "github/era-urban/wrfpy", "html_url": "https://rseng.github.io/software/repository/github/era-urban/wrfpy", "api_url": "https://rseng.github.io/software/api/repos/github/era-urban/wrfpy"}, {"uid": "github/AmeryGration/dyad", "html_url": "https://rseng.github.io/software/repository/github/AmeryGration/dyad", "api_url": "https://rseng.github.io/software/api/repos/github/AmeryGration/dyad"}, {"uid": "github/open-aviation/tangram", "html_url": "https://rseng.github.io/software/repository/github/open-aviation/tangram", "api_url": "https://rseng.github.io/software/api/repos/github/open-aviation/tangram"}, {"uid": "github/Dfupa/meTAline", "html_url": "https://rseng.github.io/software/repository/github/Dfupa/meTAline", "api_url": "https://rseng.github.io/software/api/repos/github/Dfupa/meTAline"}, {"uid": "github/jdonnert/WVTICs", "html_url": "https://rseng.github.io/software/repository/github/jdonnert/WVTICs", "api_url": "https://rseng.github.io/software/api/repos/github/jdonnert/WVTICs"}, {"uid": "github/ZacharyJia/opsdn", "html_url": "https://rseng.github.io/software/repository/github/ZacharyJia/opsdn", "api_url": "https://rseng.github.io/software/api/repos/github/ZacharyJia/opsdn"}, {"uid": "github/acbecker/hotpants", "html_url": "https://rseng.github.io/software/repository/github/acbecker/hotpants", "api_url": "https://rseng.github.io/software/api/repos/github/acbecker/hotpants"}, {"uid": "github/equitable-equations/fqar", "html_url": "https://rseng.github.io/software/repository/github/equitable-equations/fqar", "api_url": "https://rseng.github.io/software/api/repos/github/equitable-equations/fqar"}, {"uid": "github/kotekan/kotekan", "html_url": "https://rseng.github.io/software/repository/github/kotekan/kotekan", "api_url": "https://rseng.github.io/software/api/repos/github/kotekan/kotekan"}, {"uid": "github/shahmoradi/grb_world", "html_url": "https://rseng.github.io/software/repository/github/shahmoradi/grb_world", "api_url": "https://rseng.github.io/software/api/repos/github/shahmoradi/grb_world"}, {"uid": "github/inpefess/gym-saturation", "html_url": "https://rseng.github.io/software/repository/github/inpefess/gym-saturation", "api_url": "https://rseng.github.io/software/api/repos/github/inpefess/gym-saturation"}, {"uid": "github/ConesaLab/MultiPower", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MultiPower", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MultiPower"}, {"uid": "github/ConesaLab/SQANTI3", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/SQANTI3", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/SQANTI3"}, {"uid": "github/ConesaLab/MOSim", "html_url": "https://rseng.github.io/software/repository/github/ConesaLab/MOSim", "api_url": "https://rseng.github.io/software/api/repos/github/ConesaLab/MOSim"}, {"uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", "html_url": "https://rseng.github.io/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", "api_url": "https://rseng.github.io/software/api/repos/github/semiautomaticgit/SemiAutomaticClassificationPlugin"}, {"uid": "github/xzackli/WignerFamilies.jl", "html_url": "https://rseng.github.io/software/repository/github/xzackli/WignerFamilies.jl", "api_url": "https://rseng.github.io/software/api/repos/github/xzackli/WignerFamilies.jl"}, {"uid": "github/xastprl/darsakx", "html_url": "https://rseng.github.io/software/repository/github/xastprl/darsakx", "api_url": "https://rseng.github.io/software/api/repos/github/xastprl/darsakx"}, {"uid": "github/Health-RI/img2catalog", "html_url": "https://rseng.github.io/software/repository/github/Health-RI/img2catalog", "api_url": "https://rseng.github.io/software/api/repos/github/Health-RI/img2catalog"}, {"uid": "github/hjens/lasso_spectra", "html_url": "https://rseng.github.io/software/repository/github/hjens/lasso_spectra", "api_url": "https://rseng.github.io/software/api/repos/github/hjens/lasso_spectra"}, {"uid": "github/cinemascience/cinema_snap", "html_url": "https://rseng.github.io/software/repository/github/cinemascience/cinema_snap", "api_url": "https://rseng.github.io/software/api/repos/github/cinemascience/cinema_snap"}, {"uid": "github/henrikju/resolve", "html_url": "https://rseng.github.io/software/repository/github/henrikju/resolve", "api_url": "https://rseng.github.io/software/api/repos/github/henrikju/resolve"}, {"uid": "github/genomicepidemiology/ARGprofiler", "html_url": "https://rseng.github.io/software/repository/github/genomicepidemiology/ARGprofiler", "api_url": "https://rseng.github.io/software/api/repos/github/genomicepidemiology/ARGprofiler"}, {"uid": "github/emerge-erc/ALminer", "html_url": "https://rseng.github.io/software/repository/github/emerge-erc/ALminer", "api_url": "https://rseng.github.io/software/api/repos/github/emerge-erc/ALminer"}, {"uid": "github/storyofthewolf/ExoRT", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoRT", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoRT"}, {"uid": "github/storyofthewolf/ExoCAM", "html_url": "https://rseng.github.io/software/repository/github/storyofthewolf/ExoCAM", "api_url": "https://rseng.github.io/software/api/repos/github/storyofthewolf/ExoCAM"}, {"uid": "github/nebblu/ReACT", "html_url": "https://rseng.github.io/software/repository/github/nebblu/ReACT", "api_url": "https://rseng.github.io/software/api/repos/github/nebblu/ReACT"}, {"uid": "github/canorve/EllipSect", "html_url": "https://rseng.github.io/software/repository/github/canorve/EllipSect", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/EllipSect"}, {"uid": "github/canorve/GALFITools", "html_url": "https://rseng.github.io/software/repository/github/canorve/GALFITools", "api_url": "https://rseng.github.io/software/api/repos/github/canorve/GALFITools"}, {"uid": "github/JesusTorrado/extrapops", "html_url": "https://rseng.github.io/software/repository/github/JesusTorrado/extrapops", "api_url": "https://rseng.github.io/software/api/repos/github/JesusTorrado/extrapops"}, {"uid": "github/LuisScoccola/persistable", "html_url": "https://rseng.github.io/software/repository/github/LuisScoccola/persistable", "api_url": "https://rseng.github.io/software/api/repos/github/LuisScoccola/persistable"}, {"uid": "github/pengweixing/FACT", "html_url": "https://rseng.github.io/software/repository/github/pengweixing/FACT", "api_url": "https://rseng.github.io/software/api/repos/github/pengweixing/FACT"}, {"uid": "github/flabarga/iSTARMOD", "html_url": "https://rseng.github.io/software/repository/github/flabarga/iSTARMOD", "api_url": "https://rseng.github.io/software/api/repos/github/flabarga/iSTARMOD"}, {"uid": "github/vcftools/index.html", "html_url": "https://rseng.github.io/software/repository/github/vcftools/index.html", "api_url": "https://rseng.github.io/software/api/repos/github/vcftools/index.html"}, {"uid": "github/grazianoucci/game", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/game", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/game"}, {"uid": "github/grazianoucci/cosmic_variance", "html_url": "https://rseng.github.io/software/repository/github/grazianoucci/cosmic_variance", "api_url": "https://rseng.github.io/software/api/repos/github/grazianoucci/cosmic_variance"}, {"uid": "github/kd0kfo/cosmology", "html_url": "https://rseng.github.io/software/repository/github/kd0kfo/cosmology", "api_url": "https://rseng.github.io/software/api/repos/github/kd0kfo/cosmology"}, {"uid": "github/egpbos/barcode", "html_url": "https://rseng.github.io/software/repository/github/egpbos/barcode", "api_url": "https://rseng.github.io/software/api/repos/github/egpbos/barcode"}, {"uid": "github/MNGuenther/allesfitter", "html_url": "https://rseng.github.io/software/repository/github/MNGuenther/allesfitter", "api_url": "https://rseng.github.io/software/api/repos/github/MNGuenther/allesfitter"}, {"uid": "github/bow/crimson", "html_url": "https://rseng.github.io/software/repository/github/bow/crimson", "api_url": "https://rseng.github.io/software/api/repos/github/bow/crimson"}, {"uid": "github/bow/fsnviz", "html_url": "https://rseng.github.io/software/repository/github/bow/fsnviz", "api_url": "https://rseng.github.io/software/api/repos/github/bow/fsnviz"}, {"uid": "github/Dulab2020/ARMT", "html_url": "https://rseng.github.io/software/repository/github/Dulab2020/ARMT", "api_url": "https://rseng.github.io/software/api/repos/github/Dulab2020/ARMT"}, {"uid": "github/GalacticDynamics-Oxford/Agama", "html_url": "https://rseng.github.io/software/repository/github/GalacticDynamics-Oxford/Agama", "api_url": "https://rseng.github.io/software/api/repos/github/GalacticDynamics-Oxford/Agama"}, {"uid": "github/siara-cc/Unishox2", "html_url": "https://rseng.github.io/software/repository/github/siara-cc/Unishox2", "api_url": "https://rseng.github.io/software/api/repos/github/siara-cc/Unishox2"}, {"uid": "github/tgrimes/SeqNet", "html_url": "https://rseng.github.io/software/repository/github/tgrimes/SeqNet", "api_url": "https://rseng.github.io/software/api/repos/github/tgrimes/SeqNet"}, {"uid": "github/Kushaalkumar-pothula/FLARE", "html_url": "https://rseng.github.io/software/repository/github/Kushaalkumar-pothula/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/Kushaalkumar-pothula/FLARE"}, {"uid": "github/aalhossary/pyemgpipeline", "html_url": "https://rseng.github.io/software/repository/github/aalhossary/pyemgpipeline", "api_url": "https://rseng.github.io/software/api/repos/github/aalhossary/pyemgpipeline"}, {"uid": "github/jonescompneurolab/hnn-core", "html_url": "https://rseng.github.io/software/repository/github/jonescompneurolab/hnn-core", "api_url": "https://rseng.github.io/software/api/repos/github/jonescompneurolab/hnn-core"}, {"uid": "github/cbielow/PTXQC", "html_url": "https://rseng.github.io/software/repository/github/cbielow/PTXQC", "api_url": "https://rseng.github.io/software/api/repos/github/cbielow/PTXQC"}, {"uid": "github/magnusmanske/snpomatic", "html_url": "https://rseng.github.io/software/repository/github/magnusmanske/snpomatic", "api_url": "https://rseng.github.io/software/api/repos/github/magnusmanske/snpomatic"}, {"uid": "github/pepkit/geofetch", "html_url": "https://rseng.github.io/software/repository/github/pepkit/geofetch", "api_url": "https://rseng.github.io/software/api/repos/github/pepkit/geofetch"}, {"uid": "github/shaniAmare/long_read_tools", "html_url": "https://rseng.github.io/software/repository/github/shaniAmare/long_read_tools", "api_url": "https://rseng.github.io/software/api/repos/github/shaniAmare/long_read_tools"}, {"uid": "github/CPM-project/MCPM", "html_url": "https://rseng.github.io/software/repository/github/CPM-project/MCPM", "api_url": "https://rseng.github.io/software/api/repos/github/CPM-project/MCPM"}, {"uid": "github/rafaeleufrasio/lightning", "html_url": "https://rseng.github.io/software/repository/github/rafaeleufrasio/lightning", "api_url": "https://rseng.github.io/software/api/repos/github/rafaeleufrasio/lightning"}, {"uid": "github/planck-npipe/hillipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/hillipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/hillipop"}, {"uid": "github/planck-npipe/lollipop", "html_url": "https://rseng.github.io/software/repository/github/planck-npipe/lollipop", "api_url": "https://rseng.github.io/software/api/repos/github/planck-npipe/lollipop"}, {"uid": "github/SERVIR/servir-aces", "html_url": "https://rseng.github.io/software/repository/github/SERVIR/servir-aces", "api_url": "https://rseng.github.io/software/api/repos/github/SERVIR/servir-aces"}, {"uid": "github/yuefan98/nleis.py", "html_url": "https://rseng.github.io/software/repository/github/yuefan98/nleis.py", "api_url": "https://rseng.github.io/software/api/repos/github/yuefan98/nleis.py"}, {"uid": "github/funkyheatmap/funkyheatmap", "html_url": "https://rseng.github.io/software/repository/github/funkyheatmap/funkyheatmap", "api_url": "https://rseng.github.io/software/api/repos/github/funkyheatmap/funkyheatmap"}, {"uid": "github/PdIPS/CBX", "html_url": "https://rseng.github.io/software/repository/github/PdIPS/CBX", "api_url": "https://rseng.github.io/software/api/repos/github/PdIPS/CBX"}, {"uid": "github/biolab/orange3", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3"}, {"uid": "github/biolab/orange3-network", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange3-network", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange3-network"}, {"uid": "github/biolab/orange-bio", "html_url": "https://rseng.github.io/software/repository/github/biolab/orange-bio", "api_url": "https://rseng.github.io/software/api/repos/github/biolab/orange-bio"}, {"uid": "github/colour-science/colour", "html_url": "https://rseng.github.io/software/repository/github/colour-science/colour", "api_url": "https://rseng.github.io/software/api/repos/github/colour-science/colour"}, {"uid": "github/Sulstice/cocktail-shaker", "html_url": "https://rseng.github.io/software/repository/github/Sulstice/cocktail-shaker", "api_url": "https://rseng.github.io/software/api/repos/github/Sulstice/cocktail-shaker"}, {"uid": "github/vreverdy/magrathea-pathfinder", "html_url": "https://rseng.github.io/software/repository/github/vreverdy/magrathea-pathfinder", "api_url": "https://rseng.github.io/software/api/repos/github/vreverdy/magrathea-pathfinder"}, {"uid": "github/aringlis/afino_release_version", "html_url": "https://rseng.github.io/software/repository/github/aringlis/afino_release_version", "api_url": "https://rseng.github.io/software/api/repos/github/aringlis/afino_release_version"}, {"uid": "github/surhudm/savitzky_golay_with_errors", "html_url": "https://rseng.github.io/software/repository/github/surhudm/savitzky_golay_with_errors", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/savitzky_golay_with_errors"}, {"uid": "github/surhudm/aum", "html_url": "https://rseng.github.io/software/repository/github/surhudm/aum", "api_url": "https://rseng.github.io/software/api/repos/github/surhudm/aum"}, {"uid": "github/nickrodd/HDMSpectra", "html_url": "https://rseng.github.io/software/repository/github/nickrodd/HDMSpectra", "api_url": "https://rseng.github.io/software/api/repos/github/nickrodd/HDMSpectra"}, {"uid": "github/dragontaoran/sleev", "html_url": "https://rseng.github.io/software/repository/github/dragontaoran/sleev", "api_url": "https://rseng.github.io/software/api/repos/github/dragontaoran/sleev"}, {"uid": "github/pfeinsper/drone-swarm-search", "html_url": "https://rseng.github.io/software/repository/github/pfeinsper/drone-swarm-search", "api_url": "https://rseng.github.io/software/api/repos/github/pfeinsper/drone-swarm-search"}, {"uid": "github/AusSRC/SoFiAX", "html_url": "https://rseng.github.io/software/repository/github/AusSRC/SoFiAX", "api_url": "https://rseng.github.io/software/api/repos/github/AusSRC/SoFiAX"}, {"uid": "github/leprojetcastor/castor", "html_url": "https://rseng.github.io/software/repository/github/leprojetcastor/castor", "api_url": "https://rseng.github.io/software/api/repos/github/leprojetcastor/castor"}, {"uid": "github/JeffLuo9/Hep_Ploidy_protocol", "html_url": "https://rseng.github.io/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLuo9/Hep_Ploidy_protocol"}, {"uid": "github/VirtualPlanetaryLaboratory/vplanet", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/vplanet", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/vplanet"}, {"uid": "github/VirtualPlanetaryLaboratory/atmos", "html_url": "https://rseng.github.io/software/repository/github/VirtualPlanetaryLaboratory/atmos", "api_url": "https://rseng.github.io/software/api/repos/github/VirtualPlanetaryLaboratory/atmos"}, {"uid": "github/tbep-tech/tbeptools", "html_url": "https://rseng.github.io/software/repository/github/tbep-tech/tbeptools", "api_url": "https://rseng.github.io/software/api/repos/github/tbep-tech/tbeptools"}, {"uid": "github/bic-nirrh/precocity", "html_url": "https://rseng.github.io/software/repository/github/bic-nirrh/precocity", "api_url": "https://rseng.github.io/software/api/repos/github/bic-nirrh/precocity"}, {"uid": "github/patrickwest/EukRep", "html_url": "https://rseng.github.io/software/repository/github/patrickwest/EukRep", "api_url": "https://rseng.github.io/software/api/repos/github/patrickwest/EukRep"}, {"uid": "github/cameronliang/BayesVP", "html_url": "https://rseng.github.io/software/repository/github/cameronliang/BayesVP", "api_url": "https://rseng.github.io/software/api/repos/github/cameronliang/BayesVP"}, {"uid": "github/bhorowitz/HyPhy-public", "html_url": "https://rseng.github.io/software/repository/github/bhorowitz/HyPhy-public", "api_url": "https://rseng.github.io/software/api/repos/github/bhorowitz/HyPhy-public"}, {"uid": "github/qianlivan/RPPPS", "html_url": "https://rseng.github.io/software/repository/github/qianlivan/RPPPS", "api_url": "https://rseng.github.io/software/api/repos/github/qianlivan/RPPPS"}, {"uid": "github/sosl/H-FISTA", "html_url": "https://rseng.github.io/software/repository/github/sosl/H-FISTA", "api_url": "https://rseng.github.io/software/api/repos/github/sosl/H-FISTA"}, {"uid": "github/sbebo/joypy", "html_url": "https://rseng.github.io/software/repository/github/sbebo/joypy", "api_url": "https://rseng.github.io/software/api/repos/github/sbebo/joypy"}, {"uid": "github/yuansh3354/CaSee", "html_url": "https://rseng.github.io/software/repository/github/yuansh3354/CaSee", "api_url": "https://rseng.github.io/software/api/repos/github/yuansh3354/CaSee"}, {"uid": "github/SAIL-Labs/PIRATES", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/PIRATES", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/PIRATES"}, {"uid": "github/SAIL-Labs/AMICAL", "html_url": "https://rseng.github.io/software/repository/github/SAIL-Labs/AMICAL", "api_url": "https://rseng.github.io/software/api/repos/github/SAIL-Labs/AMICAL"}, {"uid": "github/krab1k/ChargeFW2", "html_url": "https://rseng.github.io/software/repository/github/krab1k/ChargeFW2", "api_url": "https://rseng.github.io/software/api/repos/github/krab1k/ChargeFW2"}, {"uid": "github/arup-group/pam", "html_url": "https://rseng.github.io/software/repository/github/arup-group/pam", "api_url": "https://rseng.github.io/software/api/repos/github/arup-group/pam"}, {"uid": "github/simoncasassus/ConeRot", "html_url": "https://rseng.github.io/software/repository/github/simoncasassus/ConeRot", "api_url": "https://rseng.github.io/software/api/repos/github/simoncasassus/ConeRot"}, {"uid": "github/AnitaPetzler/AMOEBA", "html_url": "https://rseng.github.io/software/repository/github/AnitaPetzler/AMOEBA", "api_url": "https://rseng.github.io/software/api/repos/github/AnitaPetzler/AMOEBA"}, {"uid": "github/horovod/horovod", "html_url": "https://rseng.github.io/software/repository/github/horovod/horovod", "api_url": "https://rseng.github.io/software/api/repos/github/horovod/horovod"}, {"uid": "github/nigyta/dfast_core", "html_url": "https://rseng.github.io/software/repository/github/nigyta/dfast_core", "api_url": "https://rseng.github.io/software/api/repos/github/nigyta/dfast_core"}, {"uid": "github/infer-actively/pymdp", "html_url": "https://rseng.github.io/software/repository/github/infer-actively/pymdp", "api_url": "https://rseng.github.io/software/api/repos/github/infer-actively/pymdp"}, {"uid": "github/andreasmang/claire", "html_url": "https://rseng.github.io/software/repository/github/andreasmang/claire", "api_url": "https://rseng.github.io/software/api/repos/github/andreasmang/claire"}, {"uid": "github/OSU-BMBL/IDAM", "html_url": "https://rseng.github.io/software/repository/github/OSU-BMBL/IDAM", "api_url": "https://rseng.github.io/software/api/repos/github/OSU-BMBL/IDAM"}, {"uid": "github/sustainableaviation/jetfuelburn", "html_url": "https://rseng.github.io/software/repository/github/sustainableaviation/jetfuelburn", "api_url": "https://rseng.github.io/software/api/repos/github/sustainableaviation/jetfuelburn"}, {"uid": "github/mswzeus/TargetNet", "html_url": "https://rseng.github.io/software/repository/github/mswzeus/TargetNet", "api_url": "https://rseng.github.io/software/api/repos/github/mswzeus/TargetNet"}, {"uid": "github/wfondrie/mokapot", "html_url": "https://rseng.github.io/software/repository/github/wfondrie/mokapot", "api_url": "https://rseng.github.io/software/api/repos/github/wfondrie/mokapot"}, {"uid": "github/mes5k/amap-align", "html_url": "https://rseng.github.io/software/repository/github/mes5k/amap-align", "api_url": "https://rseng.github.io/software/api/repos/github/mes5k/amap-align"}, {"uid": "github/openscm/openscm-twolayermodel", "html_url": "https://rseng.github.io/software/repository/github/openscm/openscm-twolayermodel", "api_url": "https://rseng.github.io/software/api/repos/github/openscm/openscm-twolayermodel"}, {"uid": "github/fitbenchmarking/fitbenchmarking", "html_url": "https://rseng.github.io/software/repository/github/fitbenchmarking/fitbenchmarking", "api_url": "https://rseng.github.io/software/api/repos/github/fitbenchmarking/fitbenchmarking"}, {"uid": "github/ZhaoXM-Lab/metaMIC", "html_url": "https://rseng.github.io/software/repository/github/ZhaoXM-Lab/metaMIC", "api_url": "https://rseng.github.io/software/api/repos/github/ZhaoXM-Lab/metaMIC"}, {"uid": "github/ANP-Granular/ParticleTracking", "html_url": "https://rseng.github.io/software/repository/github/ANP-Granular/ParticleTracking", "api_url": "https://rseng.github.io/software/api/repos/github/ANP-Granular/ParticleTracking"}, {"uid": "github/odb9402/CNNPeaks", "html_url": "https://rseng.github.io/software/repository/github/odb9402/CNNPeaks", "api_url": "https://rseng.github.io/software/api/repos/github/odb9402/CNNPeaks"}, {"uid": "github/soichiro-hattori/unpopular", "html_url": "https://rseng.github.io/software/repository/github/soichiro-hattori/unpopular", "api_url": "https://rseng.github.io/software/api/repos/github/soichiro-hattori/unpopular"}, {"uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "html_url": "https://rseng.github.io/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", "api_url": "https://rseng.github.io/software/api/repos/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling"}, {"uid": "github/HingeAssembler/HINGE", "html_url": "https://rseng.github.io/software/repository/github/HingeAssembler/HINGE", "api_url": "https://rseng.github.io/software/api/repos/github/HingeAssembler/HINGE"}, {"uid": "github/marbl/Krona", "html_url": "https://rseng.github.io/software/repository/github/marbl/Krona", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Krona"}, {"uid": "github/marbl/Mash", "html_url": "https://rseng.github.io/software/repository/github/marbl/Mash", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Mash"}, {"uid": "github/marbl/MashMap", "html_url": "https://rseng.github.io/software/repository/github/marbl/MashMap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/MashMap"}, {"uid": "github/marbl/Winnowmap", "html_url": "https://rseng.github.io/software/repository/github/marbl/Winnowmap", "api_url": "https://rseng.github.io/software/api/repos/github/marbl/Winnowmap"}, {"uid": "github/dbosul/CWITools", "html_url": "https://rseng.github.io/software/repository/github/dbosul/CWITools", "api_url": "https://rseng.github.io/software/api/repos/github/dbosul/CWITools"}, {"uid": "github/warrickball/tomso", "html_url": "https://rseng.github.io/software/repository/github/warrickball/tomso", "api_url": "https://rseng.github.io/software/api/repos/github/warrickball/tomso"}, {"uid": "github/fzagaria/COpops", "html_url": "https://rseng.github.io/software/repository/github/fzagaria/COpops", "api_url": "https://rseng.github.io/software/api/repos/github/fzagaria/COpops"}, {"uid": "github/fakedrtom/oncogemini", "html_url": "https://rseng.github.io/software/repository/github/fakedrtom/oncogemini", "api_url": "https://rseng.github.io/software/api/repos/github/fakedrtom/oncogemini"}, {"uid": "github/kidusasfaw/spatPomp", "html_url": "https://rseng.github.io/software/repository/github/kidusasfaw/spatPomp", "api_url": "https://rseng.github.io/software/api/repos/github/kidusasfaw/spatPomp"}, {"uid": "github/EC-Earth/ece2cmor3", "html_url": "https://rseng.github.io/software/repository/github/EC-Earth/ece2cmor3", "api_url": "https://rseng.github.io/software/api/repos/github/EC-Earth/ece2cmor3"}, {"uid": "github/KennethEnevoldsen/augmenty", "html_url": "https://rseng.github.io/software/repository/github/KennethEnevoldsen/augmenty", "api_url": "https://rseng.github.io/software/api/repos/github/KennethEnevoldsen/augmenty"}, {"uid": "github/goharbor/harbor", "html_url": "https://rseng.github.io/software/repository/github/goharbor/harbor", "api_url": "https://rseng.github.io/software/api/repos/github/goharbor/harbor"}, {"uid": "github/Qepanna/goFlux", "html_url": "https://rseng.github.io/software/repository/github/Qepanna/goFlux", "api_url": "https://rseng.github.io/software/api/repos/github/Qepanna/goFlux"}, {"uid": "github/alexji/LESSPayne", "html_url": "https://rseng.github.io/software/repository/github/alexji/LESSPayne", "api_url": "https://rseng.github.io/software/api/repos/github/alexji/LESSPayne"}, {"uid": "github/theGreatHerrLebert/rustims", "html_url": "https://rseng.github.io/software/repository/github/theGreatHerrLebert/rustims", "api_url": "https://rseng.github.io/software/api/repos/github/theGreatHerrLebert/rustims"}, {"uid": "github/JuliaHEP/UnROOT.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHEP/UnROOT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHEP/UnROOT.jl"}, {"uid": "github/feature-engine/feature_engine", "html_url": "https://rseng.github.io/software/repository/github/feature-engine/feature_engine", "api_url": "https://rseng.github.io/software/api/repos/github/feature-engine/feature_engine"}, {"uid": "github/sachsmc/cosinor", "html_url": "https://rseng.github.io/software/repository/github/sachsmc/cosinor", "api_url": "https://rseng.github.io/software/api/repos/github/sachsmc/cosinor"}, {"uid": "github/michaeltouati/ESVM", "html_url": "https://rseng.github.io/software/repository/github/michaeltouati/ESVM", "api_url": "https://rseng.github.io/software/api/repos/github/michaeltouati/ESVM"}, {"uid": "github/lucaborsato/trades", "html_url": "https://rseng.github.io/software/repository/github/lucaborsato/trades", "api_url": "https://rseng.github.io/software/api/repos/github/lucaborsato/trades"}, {"uid": "github/henry2004y/Vlasiator.jl", "html_url": "https://rseng.github.io/software/repository/github/henry2004y/Vlasiator.jl", "api_url": "https://rseng.github.io/software/api/repos/github/henry2004y/Vlasiator.jl"}, {"uid": "github/blind-contours/CVtreeMLE", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/CVtreeMLE", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/CVtreeMLE"}, {"uid": "github/blind-contours/SuperNOVA", "html_url": "https://rseng.github.io/software/repository/github/blind-contours/SuperNOVA", "api_url": "https://rseng.github.io/software/api/repos/github/blind-contours/SuperNOVA"}, {"uid": "github/JeffLCoughlin/skye", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/skye", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/skye"}, {"uid": "github/JeffLCoughlin/EphemMatch", "html_url": "https://rseng.github.io/software/repository/github/JeffLCoughlin/EphemMatch", "api_url": "https://rseng.github.io/software/api/repos/github/JeffLCoughlin/EphemMatch"}, {"uid": "github/cheginit/HyRiver", "html_url": "https://rseng.github.io/software/repository/github/cheginit/HyRiver", "api_url": "https://rseng.github.io/software/api/repos/github/cheginit/HyRiver"}, {"uid": "github/YeoLab/clipper", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/clipper", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/clipper"}, {"uid": "github/YeoLab/FLARE", "html_url": "https://rseng.github.io/software/repository/github/YeoLab/FLARE", "api_url": "https://rseng.github.io/software/api/repos/github/YeoLab/FLARE"}, {"uid": "github/CadenArmstrong/simuTrans", "html_url": "https://rseng.github.io/software/repository/github/CadenArmstrong/simuTrans", "api_url": "https://rseng.github.io/software/api/repos/github/CadenArmstrong/simuTrans"}, {"uid": "github/Hoeijmakers/tayph", "html_url": "https://rseng.github.io/software/repository/github/Hoeijmakers/tayph", "api_url": "https://rseng.github.io/software/api/repos/github/Hoeijmakers/tayph"}, {"uid": "github/r-cas/caracas", "html_url": "https://rseng.github.io/software/repository/github/r-cas/caracas", "api_url": "https://rseng.github.io/software/api/repos/github/r-cas/caracas"}, {"uid": "github/ot483/NetCom", "html_url": "https://rseng.github.io/software/repository/github/ot483/NetCom", "api_url": "https://rseng.github.io/software/api/repos/github/ot483/NetCom"}, {"uid": "github/agusinac/OmicFlow", "html_url": "https://rseng.github.io/software/repository/github/agusinac/OmicFlow", "api_url": "https://rseng.github.io/software/api/repos/github/agusinac/OmicFlow"}, {"uid": "github/lisadang27/SPCA", "html_url": "https://rseng.github.io/software/repository/github/lisadang27/SPCA", "api_url": "https://rseng.github.io/software/api/repos/github/lisadang27/SPCA"}, {"uid": "github/benvanwerkhoven/kernel_tuner", "html_url": "https://rseng.github.io/software/repository/github/benvanwerkhoven/kernel_tuner", "api_url": "https://rseng.github.io/software/api/repos/github/benvanwerkhoven/kernel_tuner"}, {"uid": "github/sonwell/biotools", "html_url": "https://rseng.github.io/software/repository/github/sonwell/biotools", "api_url": "https://rseng.github.io/software/api/repos/github/sonwell/biotools"}, {"uid": "github/astropatel/twinkle", "html_url": "https://rseng.github.io/software/repository/github/astropatel/twinkle", "api_url": "https://rseng.github.io/software/api/repos/github/astropatel/twinkle"}, {"uid": "github/sing-group/my-brain-seq", "html_url": "https://rseng.github.io/software/repository/github/sing-group/my-brain-seq", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/my-brain-seq"}, {"uid": "github/sing-group/seda", "html_url": "https://rseng.github.io/software/repository/github/sing-group/seda", "api_url": "https://rseng.github.io/software/api/repos/github/sing-group/seda"}, {"uid": "github/ethicsai/ethical-smart-grid", "html_url": "https://rseng.github.io/software/repository/github/ethicsai/ethical-smart-grid", "api_url": "https://rseng.github.io/software/api/repos/github/ethicsai/ethical-smart-grid"}, {"uid": "github/nedRad88/SCALAR", "html_url": "https://rseng.github.io/software/repository/github/nedRad88/SCALAR", "api_url": "https://rseng.github.io/software/api/repos/github/nedRad88/SCALAR"}, {"uid": "github/CaNS-World/CaNS-Fizzy", "html_url": "https://rseng.github.io/software/repository/github/CaNS-World/CaNS-Fizzy", "api_url": "https://rseng.github.io/software/api/repos/github/CaNS-World/CaNS-Fizzy"}, {"uid": "github/KTH-Nek5000/UQit", "html_url": "https://rseng.github.io/software/repository/github/KTH-Nek5000/UQit", "api_url": "https://rseng.github.io/software/api/repos/github/KTH-Nek5000/UQit"}, {"uid": "github/MP-Gadget/bigfile", "html_url": "https://rseng.github.io/software/repository/github/MP-Gadget/bigfile", "api_url": "https://rseng.github.io/software/api/repos/github/MP-Gadget/bigfile"}, {"uid": "github/aschafu/PSSH2", "html_url": "https://rseng.github.io/software/repository/github/aschafu/PSSH2", "api_url": "https://rseng.github.io/software/api/repos/github/aschafu/PSSH2"}, {"uid": "github/cblakeastro/intensitypower", "html_url": "https://rseng.github.io/software/repository/github/cblakeastro/intensitypower", "api_url": "https://rseng.github.io/software/api/repos/github/cblakeastro/intensitypower"}, {"uid": "github/akdeniz-uzay/A-Track", "html_url": "https://rseng.github.io/software/repository/github/akdeniz-uzay/A-Track", "api_url": "https://rseng.github.io/software/api/repos/github/akdeniz-uzay/A-Track"}, {"uid": "github/dawolfgang/MRrelation", "html_url": "https://rseng.github.io/software/repository/github/dawolfgang/MRrelation", "api_url": "https://rseng.github.io/software/api/repos/github/dawolfgang/MRrelation"}, {"uid": "github/underworldcode/underworld3", "html_url": "https://rseng.github.io/software/repository/github/underworldcode/underworld3", "api_url": "https://rseng.github.io/software/api/repos/github/underworldcode/underworld3"}, {"uid": "github/JuliaHCI/ADI.jl", "html_url": "https://rseng.github.io/software/repository/github/JuliaHCI/ADI.jl", "api_url": "https://rseng.github.io/software/api/repos/github/JuliaHCI/ADI.jl"}, {"uid": "github/FoxFortino/ABC-SN", "html_url": "https://rseng.github.io/software/repository/github/FoxFortino/ABC-SN", "api_url": "https://rseng.github.io/software/api/repos/github/FoxFortino/ABC-SN"}, {"uid": "github/p-sira/ellip", "html_url": "https://rseng.github.io/software/repository/github/p-sira/ellip", "api_url": "https://rseng.github.io/software/api/repos/github/p-sira/ellip"}, {"uid": "github/radifar/PyPLIF-HIPPOS", "html_url": "https://rseng.github.io/software/repository/github/radifar/PyPLIF-HIPPOS", "api_url": "https://rseng.github.io/software/api/repos/github/radifar/PyPLIF-HIPPOS"}, {"uid": "github/agorajs/agora-vpsc", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-vpsc", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-vpsc"}, {"uid": "github/agorajs/agora-forbid", "html_url": "https://rseng.github.io/software/repository/github/agorajs/agora-forbid", "api_url": "https://rseng.github.io/software/api/repos/github/agorajs/agora-forbid"}, {"uid": "github/neuralhydrology/neuralhydrology", "html_url": "https://rseng.github.io/software/repository/github/neuralhydrology/neuralhydrology", "api_url": "https://rseng.github.io/software/api/repos/github/neuralhydrology/neuralhydrology"}, {"uid": "github/r-spatial/rgee", "html_url": "https://rseng.github.io/software/repository/github/r-spatial/rgee", "api_url": "https://rseng.github.io/software/api/repos/github/r-spatial/rgee"}, {"uid": "github/HeracleBT/vEMstitch", "html_url": "https://rseng.github.io/software/repository/github/HeracleBT/vEMstitch", "api_url": "https://rseng.github.io/software/api/repos/github/HeracleBT/vEMstitch"}, {"uid": "github/RuthAngus/gprotation", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/gprotation", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/gprotation"}, {"uid": "github/RuthAngus/SIPK2", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/SIPK2", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/SIPK2"}, {"uid": "github/RuthAngus/stardate", "html_url": "https://rseng.github.io/software/repository/github/RuthAngus/stardate", "api_url": "https://rseng.github.io/software/api/repos/github/RuthAngus/stardate"}, {"uid": "github/thiago-glissoi/FFF-Line-Segmentation", "html_url": "https://rseng.github.io/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", "api_url": "https://rseng.github.io/software/api/repos/github/thiago-glissoi/FFF-Line-Segmentation"}, {"uid": "github/angelmons/landlab", "html_url": "https://rseng.github.io/software/repository/github/angelmons/landlab", "api_url": "https://rseng.github.io/software/api/repos/github/angelmons/landlab"}, {"uid": "github/interactivereport/OmicsView0", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/OmicsView0", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/OmicsView0"}, {"uid": "github/interactivereport/scRNASequest", "html_url": "https://rseng.github.io/software/repository/github/interactivereport/scRNASequest", "api_url": "https://rseng.github.io/software/api/repos/github/interactivereport/scRNASequest"}, {"uid": "github/benhid/Sequoya", "html_url": "https://rseng.github.io/software/repository/github/benhid/Sequoya", "api_url": "https://rseng.github.io/software/api/repos/github/benhid/Sequoya"}, {"uid": "github/raredd/kmdata", "html_url": "https://rseng.github.io/software/repository/github/raredd/kmdata", "api_url": "https://rseng.github.io/software/api/repos/github/raredd/kmdata"}, {"uid": "github/Smith42/XDF-GAN", "html_url": "https://rseng.github.io/software/repository/github/Smith42/XDF-GAN", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/XDF-GAN"}, {"uid": "github/Smith42/astroPT", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroPT", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroPT"}, {"uid": "github/Smith42/astroddpm", "html_url": "https://rseng.github.io/software/repository/github/Smith42/astroddpm", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/astroddpm"}, {"uid": "github/Smith42/pix2prof", "html_url": "https://rseng.github.io/software/repository/github/Smith42/pix2prof", "api_url": "https://rseng.github.io/software/api/repos/github/Smith42/pix2prof"}, {"uid": "github/smsharma/dark-photons-perturbations", "html_url": "https://rseng.github.io/software/repository/github/smsharma/dark-photons-perturbations", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/dark-photons-perturbations"}, {"uid": "github/smsharma/mining-for-substructure-lens", "html_url": "https://rseng.github.io/software/repository/github/smsharma/mining-for-substructure-lens", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/mining-for-substructure-lens"}, {"uid": "github/smsharma/fermi-gce-flows", "html_url": "https://rseng.github.io/software/repository/github/smsharma/fermi-gce-flows", "api_url": "https://rseng.github.io/software/api/repos/github/smsharma/fermi-gce-flows"}, {"uid": "github/julianreul/mode_behave", "html_url": "https://rseng.github.io/software/repository/github/julianreul/mode_behave", "api_url": "https://rseng.github.io/software/api/repos/github/julianreul/mode_behave"}, {"uid": "github/ilikecubesnstuff/commensurability", "html_url": "https://rseng.github.io/software/repository/github/ilikecubesnstuff/commensurability", "api_url": "https://rseng.github.io/software/api/repos/github/ilikecubesnstuff/commensurability"}, {"uid": "github/c5shen/TIPP3", "html_url": "https://rseng.github.io/software/repository/github/c5shen/TIPP3", "api_url": "https://rseng.github.io/software/api/repos/github/c5shen/TIPP3"}, {"uid": "github/siavashk/pycpd", "html_url": "https://rseng.github.io/software/repository/github/siavashk/pycpd", "api_url": "https://rseng.github.io/software/api/repos/github/siavashk/pycpd"}, {"uid": "github/MicGrasso/bigonlight", "html_url": "https://rseng.github.io/software/repository/github/MicGrasso/bigonlight", "api_url": "https://rseng.github.io/software/api/repos/github/MicGrasso/bigonlight"}, {"uid": "github/QuantumPlasma/SFQEDtoolkit", "html_url": "https://rseng.github.io/software/repository/github/QuantumPlasma/SFQEDtoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/QuantumPlasma/SFQEDtoolkit"}, {"uid": "github/m-a-d-n-e-s-s/madness", "html_url": "https://rseng.github.io/software/repository/github/m-a-d-n-e-s-s/madness", "api_url": "https://rseng.github.io/software/api/repos/github/m-a-d-n-e-s-s/madness"}, {"uid": "github/biobakery/phylophlan", "html_url": "https://rseng.github.io/software/repository/github/biobakery/phylophlan", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/phylophlan"}, {"uid": "github/biobakery/halla", "html_url": "https://rseng.github.io/software/repository/github/biobakery/halla", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/halla"}, {"uid": "github/biobakery/MetaPhlAn", "html_url": "https://rseng.github.io/software/repository/github/biobakery/MetaPhlAn", "api_url": "https://rseng.github.io/software/api/repos/github/biobakery/MetaPhlAn"}, {"uid": "github/Brauckhoff/biopixR", "html_url": "https://rseng.github.io/software/repository/github/Brauckhoff/biopixR", "api_url": "https://rseng.github.io/software/api/repos/github/Brauckhoff/biopixR"}, {"uid": "github/healpy/healpy", "html_url": "https://rseng.github.io/software/repository/github/healpy/healpy", "api_url": "https://rseng.github.io/software/api/repos/github/healpy/healpy"}, {"uid": "github/learningsimulator/learningsimulator", "html_url": "https://rseng.github.io/software/repository/github/learningsimulator/learningsimulator", "api_url": "https://rseng.github.io/software/api/repos/github/learningsimulator/learningsimulator"}, {"uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "html_url": "https://rseng.github.io/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", "api_url": "https://rseng.github.io/software/api/repos/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images"}, {"uid": "github/rpoleski/MulensModel", "html_url": "https://rseng.github.io/software/repository/github/rpoleski/MulensModel", "api_url": "https://rseng.github.io/software/api/repos/github/rpoleski/MulensModel"}, {"uid": "github/selkamand/ggoncoplot", "html_url": "https://rseng.github.io/software/repository/github/selkamand/ggoncoplot", "api_url": "https://rseng.github.io/software/api/repos/github/selkamand/ggoncoplot"}, {"uid": "github/yesint/EnCurv", "html_url": "https://rseng.github.io/software/repository/github/yesint/EnCurv", "api_url": "https://rseng.github.io/software/api/repos/github/yesint/EnCurv"}, {"uid": "github/HHTpy/HHTpywrapper", "html_url": "https://rseng.github.io/software/repository/github/HHTpy/HHTpywrapper", "api_url": "https://rseng.github.io/software/api/repos/github/HHTpy/HHTpywrapper"}, {"uid": "github/Azeret/galIMF", "html_url": "https://rseng.github.io/software/repository/github/Azeret/galIMF", "api_url": "https://rseng.github.io/software/api/repos/github/Azeret/galIMF"}, {"uid": "github/yuhaoran/CUBE", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE"}, {"uid": "github/yuhaoran/CUBE2", "html_url": "https://rseng.github.io/software/repository/github/yuhaoran/CUBE2", "api_url": "https://rseng.github.io/software/api/repos/github/yuhaoran/CUBE2"}, {"uid": "github/bjmt/universalmotif", "html_url": "https://rseng.github.io/software/repository/github/bjmt/universalmotif", "api_url": "https://rseng.github.io/software/api/repos/github/bjmt/universalmotif"}, {"uid": "github/METHODS-Group/DRDMannTurb", "html_url": "https://rseng.github.io/software/repository/github/METHODS-Group/DRDMannTurb", "api_url": "https://rseng.github.io/software/api/repos/github/METHODS-Group/DRDMannTurb"}, {"uid": "github/joacoh/wise2mbh", "html_url": "https://rseng.github.io/software/repository/github/joacoh/wise2mbh", "api_url": "https://rseng.github.io/software/api/repos/github/joacoh/wise2mbh"}, {"uid": "github/camfort/fortran-src", "html_url": "https://rseng.github.io/software/repository/github/camfort/fortran-src", "api_url": "https://rseng.github.io/software/api/repos/github/camfort/fortran-src"}, {"uid": "github/JungleComputing/rocket", "html_url": "https://rseng.github.io/software/repository/github/JungleComputing/rocket", "api_url": "https://rseng.github.io/software/api/repos/github/JungleComputing/rocket"}, {"uid": "github/ICAMS/strucscan", "html_url": "https://rseng.github.io/software/repository/github/ICAMS/strucscan", "api_url": "https://rseng.github.io/software/api/repos/github/ICAMS/strucscan"}, {"uid": "github/BiostatOmics/MORE", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/MORE", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/MORE"}, {"uid": "github/BiostatOmics/Coxmos", "html_url": "https://rseng.github.io/software/repository/github/BiostatOmics/Coxmos", "api_url": "https://rseng.github.io/software/api/repos/github/BiostatOmics/Coxmos"}, {"uid": "github/BioHPC/MegaD", "html_url": "https://rseng.github.io/software/repository/github/BioHPC/MegaD", "api_url": "https://rseng.github.io/software/api/repos/github/BioHPC/MegaD"}, {"uid": "github/dparks1134/RefineM", "html_url": "https://rseng.github.io/software/repository/github/dparks1134/RefineM", "api_url": "https://rseng.github.io/software/api/repos/github/dparks1134/RefineM"}, {"uid": "github/baiyueh/PANINIpy", "html_url": "https://rseng.github.io/software/repository/github/baiyueh/PANINIpy", "api_url": "https://rseng.github.io/software/api/repos/github/baiyueh/PANINIpy"}, {"uid": "github/markusbonse/applefy", "html_url": "https://rseng.github.io/software/repository/github/markusbonse/applefy", "api_url": "https://rseng.github.io/software/api/repos/github/markusbonse/applefy"}, {"uid": "github/XGI-MSU/WDMWaveletTransforms", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/WDMWaveletTransforms", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/WDMWaveletTransforms"}, {"uid": "github/XGI-MSU/PyIMRPhenomD", "html_url": "https://rseng.github.io/software/repository/github/XGI-MSU/PyIMRPhenomD", "api_url": "https://rseng.github.io/software/api/repos/github/XGI-MSU/PyIMRPhenomD"}, {"uid": "github/Circuitscape/Omniscape.jl", "html_url": "https://rseng.github.io/software/repository/github/Circuitscape/Omniscape.jl", "api_url": "https://rseng.github.io/software/api/repos/github/Circuitscape/Omniscape.jl"}, {"uid": "github/SofieVG/FlowSOM", "html_url": "https://rseng.github.io/software/repository/github/SofieVG/FlowSOM", "api_url": "https://rseng.github.io/software/api/repos/github/SofieVG/FlowSOM"}, {"uid": "github/gmorras/pyEFPE", "html_url": "https://rseng.github.io/software/repository/github/gmorras/pyEFPE", "api_url": "https://rseng.github.io/software/api/repos/github/gmorras/pyEFPE"}, {"uid": "github/alexrhowe/APOLLO", "html_url": "https://rseng.github.io/software/repository/github/alexrhowe/APOLLO", "api_url": "https://rseng.github.io/software/api/repos/github/alexrhowe/APOLLO"}, {"uid": "github/opimwue/ddop", "html_url": "https://rseng.github.io/software/repository/github/opimwue/ddop", "api_url": "https://rseng.github.io/software/api/repos/github/opimwue/ddop"}, {"uid": "github/Joost987/MONDPMesh", "html_url": "https://rseng.github.io/software/repository/github/Joost987/MONDPMesh", "api_url": "https://rseng.github.io/software/api/repos/github/Joost987/MONDPMesh"}, {"uid": "github/NicolasHug/Surprise", "html_url": "https://rseng.github.io/software/repository/github/NicolasHug/Surprise", "api_url": "https://rseng.github.io/software/api/repos/github/NicolasHug/Surprise"}, {"uid": "github/rnajena/sugar", "html_url": "https://rseng.github.io/software/repository/github/rnajena/sugar", "api_url": "https://rseng.github.io/software/api/repos/github/rnajena/sugar"}, {"uid": "github/ElectionDataAnalysis/electiondata", "html_url": "https://rseng.github.io/software/repository/github/ElectionDataAnalysis/electiondata", "api_url": "https://rseng.github.io/software/api/repos/github/ElectionDataAnalysis/electiondata"}, {"uid": "github/legolason/PyQSOFit", "html_url": "https://rseng.github.io/software/repository/github/legolason/PyQSOFit", "api_url": "https://rseng.github.io/software/api/repos/github/legolason/PyQSOFit"}, {"uid": "github/catboost/catboost", "html_url": "https://rseng.github.io/software/repository/github/catboost/catboost", "api_url": "https://rseng.github.io/software/api/repos/github/catboost/catboost"}, {"uid": "github/wiederm/transformato", "html_url": "https://rseng.github.io/software/repository/github/wiederm/transformato", "api_url": "https://rseng.github.io/software/api/repos/github/wiederm/transformato"}, {"uid": "github/shangguandong1996/FindIT2", "html_url": "https://rseng.github.io/software/repository/github/shangguandong1996/FindIT2", "api_url": "https://rseng.github.io/software/api/repos/github/shangguandong1996/FindIT2"}, {"uid": "github/icbm-iupui/STAFF", "html_url": "https://rseng.github.io/software/repository/github/icbm-iupui/STAFF", "api_url": "https://rseng.github.io/software/api/repos/github/icbm-iupui/STAFF"}, {"uid": "github/ELeeAstro/mini_chem", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/mini_chem", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/mini_chem"}, {"uid": "github/ELeeAstro/gCMCRT", "html_url": "https://rseng.github.io/software/repository/github/ELeeAstro/gCMCRT", "api_url": "https://rseng.github.io/software/api/repos/github/ELeeAstro/gCMCRT"}, {"uid": "github/wrenfold/wrenfold", "html_url": "https://rseng.github.io/software/repository/github/wrenfold/wrenfold", "api_url": "https://rseng.github.io/software/api/repos/github/wrenfold/wrenfold"}, {"uid": "github/AstarVienna/AnisoCADO", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/AnisoCADO", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/AnisoCADO"}, {"uid": "github/AstarVienna/ScopeSim_Templates", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/ScopeSim_Templates", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/ScopeSim_Templates"}, {"uid": "github/AstarVienna/Pyckles", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/Pyckles", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/Pyckles"}, {"uid": "github/AstarVienna/irdb", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/irdb", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/irdb"}, {"uid": "github/AstarVienna/skycalc_ipy", "html_url": "https://rseng.github.io/software/repository/github/AstarVienna/skycalc_ipy", "api_url": "https://rseng.github.io/software/api/repos/github/AstarVienna/skycalc_ipy"}, {"uid": "github/ejhigson/dyPolyChord", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/dyPolyChord", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/dyPolyChord"}, {"uid": "github/ejhigson/nestcheck", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/nestcheck", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/nestcheck"}, {"uid": "github/ejhigson/perfectns", "html_url": "https://rseng.github.io/software/repository/github/ejhigson/perfectns", "api_url": "https://rseng.github.io/software/api/repos/github/ejhigson/perfectns"}, {"uid": "github/hippalectryon-0/pyloggrid", "html_url": "https://rseng.github.io/software/repository/github/hippalectryon-0/pyloggrid", "api_url": "https://rseng.github.io/software/api/repos/github/hippalectryon-0/pyloggrid"}, {"uid": "github/BleekerLab/PhenoFeatureFinder", "html_url": "https://rseng.github.io/software/repository/github/BleekerLab/PhenoFeatureFinder", "api_url": "https://rseng.github.io/software/api/repos/github/BleekerLab/PhenoFeatureFinder"}, {"uid": "github/lifs-tools/jmzTab-m", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/jmzTab-m", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/jmzTab-m"}, {"uid": "github/lifs-tools/goslin", "html_url": "https://rseng.github.io/software/repository/github/lifs-tools/goslin", "api_url": "https://rseng.github.io/software/api/repos/github/lifs-tools/goslin"}, {"uid": "github/aidenlab/juicer", "html_url": "https://rseng.github.io/software/repository/github/aidenlab/juicer", "api_url": "https://rseng.github.io/software/api/repos/github/aidenlab/juicer"}, {"uid": "github/tjiangHIT/cuteSV", "html_url": "https://rseng.github.io/software/repository/github/tjiangHIT/cuteSV", "api_url": "https://rseng.github.io/software/api/repos/github/tjiangHIT/cuteSV"}, {"uid": "github/nuclear-multimessenger-astronomy/nmma", "html_url": "https://rseng.github.io/software/repository/github/nuclear-multimessenger-astronomy/nmma", "api_url": "https://rseng.github.io/software/api/repos/github/nuclear-multimessenger-astronomy/nmma"}, {"uid": "github/chombo-discharge/chombo-discharge", "html_url": "https://rseng.github.io/software/repository/github/chombo-discharge/chombo-discharge", "api_url": "https://rseng.github.io/software/api/repos/github/chombo-discharge/chombo-discharge"}, {"uid": "github/ypmen/PulsarX", "html_url": "https://rseng.github.io/software/repository/github/ypmen/PulsarX", "api_url": "https://rseng.github.io/software/api/repos/github/ypmen/PulsarX"}, {"uid": "github/dmilakovic/QSOSIM10", "html_url": "https://rseng.github.io/software/repository/github/dmilakovic/QSOSIM10", "api_url": "https://rseng.github.io/software/api/repos/github/dmilakovic/QSOSIM10"}, {"uid": "github/MIT-LAE/TASOPT.jl", "html_url": "https://rseng.github.io/software/repository/github/MIT-LAE/TASOPT.jl", "api_url": "https://rseng.github.io/software/api/repos/github/MIT-LAE/TASOPT.jl"}, {"uid": "github/jcibanezm/DustCharge", "html_url": "https://rseng.github.io/software/repository/github/jcibanezm/DustCharge", "api_url": "https://rseng.github.io/software/api/repos/github/jcibanezm/DustCharge"}, {"uid": "github/ComparativeGenomicsToolkit/cactus", "html_url": "https://rseng.github.io/software/repository/github/ComparativeGenomicsToolkit/cactus", "api_url": "https://rseng.github.io/software/api/repos/github/ComparativeGenomicsToolkit/cactus"}, {"uid": "github/twesterhout/lattice-symmetries", "html_url": "https://rseng.github.io/software/repository/github/twesterhout/lattice-symmetries", "api_url": "https://rseng.github.io/software/api/repos/github/twesterhout/lattice-symmetries"}, {"uid": "github/the-rccg/hw2d", "html_url": "https://rseng.github.io/software/repository/github/the-rccg/hw2d", "api_url": "https://rseng.github.io/software/api/repos/github/the-rccg/hw2d"}, {"uid": "github/desihub/fastspecfit", "html_url": "https://rseng.github.io/software/repository/github/desihub/fastspecfit", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/fastspecfit"}, {"uid": "github/desihub/desitarget", "html_url": "https://rseng.github.io/software/repository/github/desihub/desitarget", "api_url": "https://rseng.github.io/software/api/repos/github/desihub/desitarget"}, {"uid": "github/torrance/pigi", "html_url": "https://rseng.github.io/software/repository/github/torrance/pigi", "api_url": "https://rseng.github.io/software/api/repos/github/torrance/pigi"}, {"uid": "github/RECETOX/RIAssigner", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/RIAssigner", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/RIAssigner"}, {"uid": "github/RECETOX/MSMetaEnhancer", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/MSMetaEnhancer", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/MSMetaEnhancer"}, {"uid": "github/RECETOX/recetox-aplcms", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-aplcms", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-aplcms"}, {"uid": "github/RECETOX/recetox-msfinder", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-msfinder", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-msfinder"}, {"uid": "github/RECETOX/recetox-xMSannotator", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/recetox-xMSannotator", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/recetox-xMSannotator"}, {"uid": "github/RECETOX/wtv", "html_url": "https://rseng.github.io/software/repository/github/RECETOX/wtv", "api_url": "https://rseng.github.io/software/api/repos/github/RECETOX/wtv"}, {"uid": "github/fabian-sp/GGLasso", "html_url": "https://rseng.github.io/software/repository/github/fabian-sp/GGLasso", "api_url": "https://rseng.github.io/software/api/repos/github/fabian-sp/GGLasso"}, {"uid": "github/frank1010111/pywaterflood", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/pywaterflood", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/pywaterflood"}, {"uid": "github/frank1010111/bluebonnet", "html_url": "https://rseng.github.io/software/repository/github/frank1010111/bluebonnet", "api_url": "https://rseng.github.io/software/api/repos/github/frank1010111/bluebonnet"}, {"uid": "github/hcdenbakker/sepia", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/sepia", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/sepia"}, {"uid": "github/hcdenbakker/SalmID", "html_url": "https://rseng.github.io/software/repository/github/hcdenbakker/SalmID", "api_url": "https://rseng.github.io/software/api/repos/github/hcdenbakker/SalmID"}, {"uid": "github/azizka/IUCNN", "html_url": "https://rseng.github.io/software/repository/github/azizka/IUCNN", "api_url": "https://rseng.github.io/software/api/repos/github/azizka/IUCNN"}, {"uid": "github/ClapeyronThermo/GCIdentifier.jl", "html_url": "https://rseng.github.io/software/repository/github/ClapeyronThermo/GCIdentifier.jl", "api_url": "https://rseng.github.io/software/api/repos/github/ClapeyronThermo/GCIdentifier.jl"}, {"uid": "github/tahirulqamar/Deep-HPI-pred", "html_url": "https://rseng.github.io/software/repository/github/tahirulqamar/Deep-HPI-pred", "api_url": "https://rseng.github.io/software/api/repos/github/tahirulqamar/Deep-HPI-pred"}, {"uid": "github/alawryaguila/multi-view-AE", "html_url": "https://rseng.github.io/software/repository/github/alawryaguila/multi-view-AE", "api_url": "https://rseng.github.io/software/api/repos/github/alawryaguila/multi-view-AE"}, {"uid": "github/kuadrat/data_slicer", "html_url": "https://rseng.github.io/software/repository/github/kuadrat/data_slicer", "api_url": "https://rseng.github.io/software/api/repos/github/kuadrat/data_slicer"}, {"uid": "github/openneuropet/PET2BIDS", "html_url": "https://rseng.github.io/software/repository/github/openneuropet/PET2BIDS", "api_url": "https://rseng.github.io/software/api/repos/github/openneuropet/PET2BIDS"}, {"uid": "github/thieu1995/permetrics", "html_url": "https://rseng.github.io/software/repository/github/thieu1995/permetrics", "api_url": "https://rseng.github.io/software/api/repos/github/thieu1995/permetrics"}, {"uid": "github/AdrianA-T/cytomorph", "html_url": "https://rseng.github.io/software/repository/github/AdrianA-T/cytomorph", "api_url": "https://rseng.github.io/software/api/repos/github/AdrianA-T/cytomorph"}, {"uid": "github/Zafiirah13/meercrab", "html_url": "https://rseng.github.io/software/repository/github/Zafiirah13/meercrab", "api_url": "https://rseng.github.io/software/api/repos/github/Zafiirah13/meercrab"}, {"uid": "github/MoreiraLAB/or", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/or", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/or"}, {"uid": "github/MoreiraLAB/mensadb-open", "html_url": "https://rseng.github.io/software/repository/github/MoreiraLAB/mensadb-open", "api_url": "https://rseng.github.io/software/api/repos/github/MoreiraLAB/mensadb-open"}, {"uid": "github/mattpitkin/psrqpy", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/psrqpy", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/psrqpy"}, {"uid": "github/mattpitkin/lintegrate", "html_url": "https://rseng.github.io/software/repository/github/mattpitkin/lintegrate", "api_url": "https://rseng.github.io/software/api/repos/github/mattpitkin/lintegrate"}, {"uid": "github/jeertmans/DiffeRT2d", "html_url": "https://rseng.github.io/software/repository/github/jeertmans/DiffeRT2d", "api_url": "https://rseng.github.io/software/api/repos/github/jeertmans/DiffeRT2d"}, {"uid": "github/CLIMADA-project/climada_python", "html_url": "https://rseng.github.io/software/repository/github/CLIMADA-project/climada_python", "api_url": "https://rseng.github.io/software/api/repos/github/CLIMADA-project/climada_python"}, {"uid": "github/antoinemarchal/ROHSA", "html_url": "https://rseng.github.io/software/repository/github/antoinemarchal/ROHSA", "api_url": "https://rseng.github.io/software/api/repos/github/antoinemarchal/ROHSA"}, {"uid": "github/phitterio/phitter-kernel", "html_url": "https://rseng.github.io/software/repository/github/phitterio/phitter-kernel", "api_url": "https://rseng.github.io/software/api/repos/github/phitterio/phitter-kernel"}, {"uid": "github/somefunAgba/NLSIG-COVID19Lab", "html_url": "https://rseng.github.io/software/repository/github/somefunAgba/NLSIG-COVID19Lab", "api_url": "https://rseng.github.io/software/api/repos/github/somefunAgba/NLSIG-COVID19Lab"}, {"uid": "github/nichollsh/AGNI", "html_url": "https://rseng.github.io/software/repository/github/nichollsh/AGNI", "api_url": "https://rseng.github.io/software/api/repos/github/nichollsh/AGNI"}, {"uid": "github/GalletFlorian/TATOO", "html_url": "https://rseng.github.io/software/repository/github/GalletFlorian/TATOO", "api_url": "https://rseng.github.io/software/api/repos/github/GalletFlorian/TATOO"}, {"uid": "github/arvados/arvados", "html_url": "https://rseng.github.io/software/repository/github/arvados/arvados", "api_url": "https://rseng.github.io/software/api/repos/github/arvados/arvados"}, {"uid": "github/mwess/miit", "html_url": "https://rseng.github.io/software/repository/github/mwess/miit", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/miit"}, {"uid": "github/mwess/GreedyFHist", "html_url": "https://rseng.github.io/software/repository/github/mwess/GreedyFHist", "api_url": "https://rseng.github.io/software/api/repos/github/mwess/GreedyFHist"}, {"uid": "github/AStcherbinine/omegapy", "html_url": "https://rseng.github.io/software/repository/github/AStcherbinine/omegapy", "api_url": "https://rseng.github.io/software/api/repos/github/AStcherbinine/omegapy"}, {"uid": "github/rickhelmus/patRoon", "html_url": "https://rseng.github.io/software/repository/github/rickhelmus/patRoon", "api_url": "https://rseng.github.io/software/api/repos/github/rickhelmus/patRoon"}, {"uid": "github/AMICI-dev/AMICI", "html_url": "https://rseng.github.io/software/repository/github/AMICI-dev/AMICI", "api_url": "https://rseng.github.io/software/api/repos/github/AMICI-dev/AMICI"}, {"uid": "github/dokester/BayesicFitting", "html_url": "https://rseng.github.io/software/repository/github/dokester/BayesicFitting", "api_url": "https://rseng.github.io/software/api/repos/github/dokester/BayesicFitting"}, {"uid": "github/MilesCranmer/PySR", "html_url": "https://rseng.github.io/software/repository/github/MilesCranmer/PySR", "api_url": "https://rseng.github.io/software/api/repos/github/MilesCranmer/PySR"}, {"uid": "github/logan-pearce/lofti_gaia", "html_url": "https://rseng.github.io/software/repository/github/logan-pearce/lofti_gaia", "api_url": "https://rseng.github.io/software/api/repos/github/logan-pearce/lofti_gaia"}, {"uid": "github/hansenjohnson/WhaleMap", "html_url": "https://rseng.github.io/software/repository/github/hansenjohnson/WhaleMap", "api_url": "https://rseng.github.io/software/api/repos/github/hansenjohnson/WhaleMap"}, {"uid": "github/mlujnie/simple", "html_url": "https://rseng.github.io/software/repository/github/mlujnie/simple", "api_url": "https://rseng.github.io/software/api/repos/github/mlujnie/simple"}, {"uid": "github/Collab4exaNBody/exaDEM", "html_url": "https://rseng.github.io/software/repository/github/Collab4exaNBody/exaDEM", "api_url": "https://rseng.github.io/software/api/repos/github/Collab4exaNBody/exaDEM"}, {"uid": "github/SimVascular/svZeroDSolver", "html_url": "https://rseng.github.io/software/repository/github/SimVascular/svZeroDSolver", "api_url": "https://rseng.github.io/software/api/repos/github/SimVascular/svZeroDSolver"}, {"uid": "github/lauralwatkins/cjam", "html_url": "https://rseng.github.io/software/repository/github/lauralwatkins/cjam", "api_url": "https://rseng.github.io/software/api/repos/github/lauralwatkins/cjam"}, {"uid": "github/esa/NIDN", "html_url": "https://rseng.github.io/software/repository/github/esa/NIDN", "api_url": "https://rseng.github.io/software/api/repos/github/esa/NIDN"}, {"uid": "github/esa/polyhedral-gravity-model", "html_url": "https://rseng.github.io/software/repository/github/esa/polyhedral-gravity-model", "api_url": "https://rseng.github.io/software/api/repos/github/esa/polyhedral-gravity-model"}, {"uid": "github/esa/pagmo2-paper", "html_url": "https://rseng.github.io/software/repository/github/esa/pagmo2-paper", "api_url": "https://rseng.github.io/software/api/repos/github/esa/pagmo2-paper"}, {"uid": "github/cbio-astar-tools/GeneCloudOmics", "html_url": "https://rseng.github.io/software/repository/github/cbio-astar-tools/GeneCloudOmics", "api_url": "https://rseng.github.io/software/api/repos/github/cbio-astar-tools/GeneCloudOmics"}, {"uid": "github/fforster/delight", "html_url": "https://rseng.github.io/software/repository/github/fforster/delight", "api_url": "https://rseng.github.io/software/api/repos/github/fforster/delight"}, {"uid": "github/ERPI-UL/HELP-VRclient", "html_url": "https://rseng.github.io/software/repository/github/ERPI-UL/HELP-VRclient", "api_url": "https://rseng.github.io/software/api/repos/github/ERPI-UL/HELP-VRclient"}, {"uid": "github/cbrnr/sigviewer", "html_url": "https://rseng.github.io/software/repository/github/cbrnr/sigviewer", "api_url": "https://rseng.github.io/software/api/repos/github/cbrnr/sigviewer"}, {"uid": "github/obreschkow/dftools", "html_url": "https://rseng.github.io/software/repository/github/obreschkow/dftools", "api_url": "https://rseng.github.io/software/api/repos/github/obreschkow/dftools"}, {"uid": "github/jendelel/PrankWebApp", "html_url": "https://rseng.github.io/software/repository/github/jendelel/PrankWebApp", "api_url": "https://rseng.github.io/software/api/repos/github/jendelel/PrankWebApp"}, {"uid": "github/ptaconet/modisfast", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/modisfast", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/modisfast"}, {"uid": "github/ptaconet/bdd_rntaaf", "html_url": "https://rseng.github.io/software/repository/github/ptaconet/bdd_rntaaf", "api_url": "https://rseng.github.io/software/api/repos/github/ptaconet/bdd_rntaaf"}, {"uid": "github/CastillonMiguel/phasefieldx", "html_url": "https://rseng.github.io/software/repository/github/CastillonMiguel/phasefieldx", "api_url": "https://rseng.github.io/software/api/repos/github/CastillonMiguel/phasefieldx"}, {"uid": "github/genostats/LowKi", "html_url": "https://rseng.github.io/software/repository/github/genostats/LowKi", "api_url": "https://rseng.github.io/software/api/repos/github/genostats/LowKi"}, {"uid": "github/vincentvaneylen/k2photometry", "html_url": "https://rseng.github.io/software/repository/github/vincentvaneylen/k2photometry", "api_url": "https://rseng.github.io/software/api/repos/github/vincentvaneylen/k2photometry"}, {"uid": "github/drupke/ifsred", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsred", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsred"}, {"uid": "github/drupke/questfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/questfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/questfit"}, {"uid": "github/drupke/ifsfit", "html_url": "https://rseng.github.io/software/repository/github/drupke/ifsfit", "api_url": "https://rseng.github.io/software/api/repos/github/drupke/ifsfit"}, {"uid": "github/carlosborca/CrystaLattE", "html_url": "https://rseng.github.io/software/repository/github/carlosborca/CrystaLattE", "api_url": "https://rseng.github.io/software/api/repos/github/carlosborca/CrystaLattE"}, {"uid": "github/dirostri/CREPE", "html_url": "https://rseng.github.io/software/repository/github/dirostri/CREPE", "api_url": "https://rseng.github.io/software/api/repos/github/dirostri/CREPE"}, {"uid": "github/AdmiralenOla/Scoary", "html_url": "https://rseng.github.io/software/repository/github/AdmiralenOla/Scoary", "api_url": "https://rseng.github.io/software/api/repos/github/AdmiralenOla/Scoary"}, {"uid": "github/gogetdata/ggd-utils", "html_url": "https://rseng.github.io/software/repository/github/gogetdata/ggd-utils", "api_url": "https://rseng.github.io/software/api/repos/github/gogetdata/ggd-utils"}, {"uid": "github/PixelgenTechnologies/pixelator", "html_url": "https://rseng.github.io/software/repository/github/PixelgenTechnologies/pixelator", "api_url": "https://rseng.github.io/software/api/repos/github/PixelgenTechnologies/pixelator"}, {"uid": "github/nevrome/bleiglas", "html_url": "https://rseng.github.io/software/repository/github/nevrome/bleiglas", "api_url": "https://rseng.github.io/software/api/repos/github/nevrome/bleiglas"}, {"uid": "github/SKA-INAF/caesar-rest", "html_url": "https://rseng.github.io/software/repository/github/SKA-INAF/caesar-rest", "api_url": "https://rseng.github.io/software/api/repos/github/SKA-INAF/caesar-rest"}, {"uid": "github/mathLab/PINA", "html_url": "https://rseng.github.io/software/repository/github/mathLab/PINA", "api_url": "https://rseng.github.io/software/api/repos/github/mathLab/PINA"}, {"uid": "github/wtsi-hpag/HiLine", "html_url": "https://rseng.github.io/software/repository/github/wtsi-hpag/HiLine", "api_url": "https://rseng.github.io/software/api/repos/github/wtsi-hpag/HiLine"}, {"uid": "github/maximewack/viroCapt", "html_url": "https://rseng.github.io/software/repository/github/maximewack/viroCapt", "api_url": "https://rseng.github.io/software/api/repos/github/maximewack/viroCapt"}, {"uid": "github/alejandroaviles/fkpt", "html_url": "https://rseng.github.io/software/repository/github/alejandroaviles/fkpt", "api_url": "https://rseng.github.io/software/api/repos/github/alejandroaviles/fkpt"}, {"uid": "github/fannyhb/fargene", "html_url": "https://rseng.github.io/software/repository/github/fannyhb/fargene", "api_url": "https://rseng.github.io/software/api/repos/github/fannyhb/fargene"}, {"uid": "github/chklovski/CheckM2", "html_url": "https://rseng.github.io/software/repository/github/chklovski/CheckM2", "api_url": "https://rseng.github.io/software/api/repos/github/chklovski/CheckM2"}, {"uid": "github/mamartinod/grip-nulling", "html_url": "https://rseng.github.io/software/repository/github/mamartinod/grip-nulling", "api_url": "https://rseng.github.io/software/api/repos/github/mamartinod/grip-nulling"}, {"uid": "github/deeprob/ThioesteraseEnzymeSpecificity", "html_url": "https://rseng.github.io/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", "api_url": "https://rseng.github.io/software/api/repos/github/deeprob/ThioesteraseEnzymeSpecificity"}, {"uid": "github/ladsantos/p-winds", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/p-winds", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/p-winds"}, {"uid": "github/ladsantos/flatstar", "html_url": "https://rseng.github.io/software/repository/github/ladsantos/flatstar", "api_url": "https://rseng.github.io/software/api/repos/github/ladsantos/flatstar"}, {"uid": "github/shikhar249/OnionMHC", "html_url": "https://rseng.github.io/software/repository/github/shikhar249/OnionMHC", "api_url": "https://rseng.github.io/software/api/repos/github/shikhar249/OnionMHC"}, {"uid": "github/binzhulab/SUITOR", "html_url": "https://rseng.github.io/software/repository/github/binzhulab/SUITOR", "api_url": "https://rseng.github.io/software/api/repos/github/binzhulab/SUITOR"}, {"uid": "github/b-pardi/BraTaDio", "html_url": "https://rseng.github.io/software/repository/github/b-pardi/BraTaDio", "api_url": "https://rseng.github.io/software/api/repos/github/b-pardi/BraTaDio"}, {"uid": "github/tariks/peakachu", "html_url": "https://rseng.github.io/software/repository/github/tariks/peakachu", "api_url": "https://rseng.github.io/software/api/repos/github/tariks/peakachu"}, {"uid": "github/cgarraffo/StelNet", "html_url": "https://rseng.github.io/software/repository/github/cgarraffo/StelNet", "api_url": "https://rseng.github.io/software/api/repos/github/cgarraffo/StelNet"}, {"uid": "github/indralab/pybiopax", "html_url": "https://rseng.github.io/software/repository/github/indralab/pybiopax", "api_url": "https://rseng.github.io/software/api/repos/github/indralab/pybiopax"}, {"uid": "github/NuGrid/NuPyCEE", "html_url": "https://rseng.github.io/software/repository/github/NuGrid/NuPyCEE", "api_url": "https://rseng.github.io/software/api/repos/github/NuGrid/NuPyCEE"}, {"uid": "github/curl/curl", "html_url": "https://rseng.github.io/software/repository/github/curl/curl", "api_url": "https://rseng.github.io/software/api/repos/github/curl/curl"}, {"uid": "github/galkintool/galkin", "html_url": "https://rseng.github.io/software/repository/github/galkintool/galkin", "api_url": "https://rseng.github.io/software/api/repos/github/galkintool/galkin"}, {"uid": "github/AntoineDarveau/jwst", "html_url": "https://rseng.github.io/software/repository/github/AntoineDarveau/jwst", "api_url": "https://rseng.github.io/software/api/repos/github/AntoineDarveau/jwst"}, {"uid": "github/kazewong/flowMC", "html_url": "https://rseng.github.io/software/repository/github/kazewong/flowMC", "api_url": "https://rseng.github.io/software/api/repos/github/kazewong/flowMC"}, {"uid": "github/tripathi/Atmospheric-Athena", "html_url": "https://rseng.github.io/software/repository/github/tripathi/Atmospheric-Athena", "api_url": "https://rseng.github.io/software/api/repos/github/tripathi/Atmospheric-Athena"}, {"uid": "github/ialbert/genescape-central", "html_url": "https://rseng.github.io/software/repository/github/ialbert/genescape-central", "api_url": "https://rseng.github.io/software/api/repos/github/ialbert/genescape-central"}, {"uid": "github/ageller/firefly", "html_url": "https://rseng.github.io/software/repository/github/ageller/firefly", "api_url": "https://rseng.github.io/software/api/repos/github/ageller/firefly"}, {"uid": "github/Libensemble/libensemble", "html_url": "https://rseng.github.io/software/repository/github/Libensemble/libensemble", "api_url": "https://rseng.github.io/software/api/repos/github/Libensemble/libensemble"}, {"uid": "github/spicy-oil/hfs_fit", "html_url": "https://rseng.github.io/software/repository/github/spicy-oil/hfs_fit", "api_url": "https://rseng.github.io/software/api/repos/github/spicy-oil/hfs_fit"}, {"uid": "github/pmelsted/pizzly", "html_url": "https://rseng.github.io/software/repository/github/pmelsted/pizzly", "api_url": "https://rseng.github.io/software/api/repos/github/pmelsted/pizzly"}, {"uid": "github/ericcombiolab/LRTK", "html_url": "https://rseng.github.io/software/repository/github/ericcombiolab/LRTK", "api_url": "https://rseng.github.io/software/api/repos/github/ericcombiolab/LRTK"}, {"uid": "github/liangcheng-hrbmu/EnrichDO", "html_url": "https://rseng.github.io/software/repository/github/liangcheng-hrbmu/EnrichDO", "api_url": "https://rseng.github.io/software/api/repos/github/liangcheng-hrbmu/EnrichDO"}, {"uid": "github/McMahonCosmologyGroup/holosim-ml", "html_url": "https://rseng.github.io/software/repository/github/McMahonCosmologyGroup/holosim-ml", "api_url": "https://rseng.github.io/software/api/repos/github/McMahonCosmologyGroup/holosim-ml"}, {"uid": "github/pylops/pyproximal", "html_url": "https://rseng.github.io/software/repository/github/pylops/pyproximal", "api_url": "https://rseng.github.io/software/api/repos/github/pylops/pyproximal"}, {"uid": "github/pavanvidem/chira", "html_url": "https://rseng.github.io/software/repository/github/pavanvidem/chira", "api_url": "https://rseng.github.io/software/api/repos/github/pavanvidem/chira"}, {"uid": "github/jameschapman19/cca_zoo", "html_url": "https://rseng.github.io/software/repository/github/jameschapman19/cca_zoo", "api_url": "https://rseng.github.io/software/api/repos/github/jameschapman19/cca_zoo"}, {"uid": "github/vmalnathnambiar/exfilms", "html_url": "https://rseng.github.io/software/repository/github/vmalnathnambiar/exfilms", "api_url": "https://rseng.github.io/software/api/repos/github/vmalnathnambiar/exfilms"}, {"uid": "github/tloredo/CUDAHM", "html_url": "https://rseng.github.io/software/repository/github/tloredo/CUDAHM", "api_url": "https://rseng.github.io/software/api/repos/github/tloredo/CUDAHM"}, {"uid": "github/neuromodulation/py_neuromodulation", "html_url": "https://rseng.github.io/software/repository/github/neuromodulation/py_neuromodulation", "api_url": "https://rseng.github.io/software/api/repos/github/neuromodulation/py_neuromodulation"}, {"uid": "github/pokynmr/ipick", "html_url": "https://rseng.github.io/software/repository/github/pokynmr/ipick", "api_url": "https://rseng.github.io/software/api/repos/github/pokynmr/ipick"}, {"uid": "github/PynPoint/PynPoint", "html_url": "https://rseng.github.io/software/repository/github/PynPoint/PynPoint", "api_url": "https://rseng.github.io/software/api/repos/github/PynPoint/PynPoint"}, {"uid": "github/ylab-hi/ScanITD", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanITD", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanITD"}, {"uid": "github/ylab-hi/ScanExitronLR", "html_url": "https://rseng.github.io/software/repository/github/ylab-hi/ScanExitronLR", "api_url": "https://rseng.github.io/software/api/repos/github/ylab-hi/ScanExitronLR"}, {"uid": "github/marco-oliva/pfp", "html_url": "https://rseng.github.io/software/repository/github/marco-oliva/pfp", "api_url": "https://rseng.github.io/software/api/repos/github/marco-oliva/pfp"}, {"uid": "github/MarcNeveu/IcyDwarf", "html_url": "https://rseng.github.io/software/repository/github/MarcNeveu/IcyDwarf", "api_url": "https://rseng.github.io/software/api/repos/github/MarcNeveu/IcyDwarf"}, {"uid": "github/SpaceOdyssey/Blobby3D", "html_url": "https://rseng.github.io/software/repository/github/SpaceOdyssey/Blobby3D", "api_url": "https://rseng.github.io/software/api/repos/github/SpaceOdyssey/Blobby3D"}, {"uid": "github/bthorne93/PySM_public", "html_url": "https://rseng.github.io/software/repository/github/bthorne93/PySM_public", "api_url": "https://rseng.github.io/software/api/repos/github/bthorne93/PySM_public"}, {"uid": "github/flosalbizziae/kataegis", "html_url": "https://rseng.github.io/software/repository/github/flosalbizziae/kataegis", "api_url": "https://rseng.github.io/software/api/repos/github/flosalbizziae/kataegis"}, {"uid": "github/mroosmalen/nanosv", "html_url": "https://rseng.github.io/software/repository/github/mroosmalen/nanosv", "api_url": "https://rseng.github.io/software/api/repos/github/mroosmalen/nanosv"}, {"uid": "github/seeh/surprise", "html_url": "https://rseng.github.io/software/repository/github/seeh/surprise", "api_url": "https://rseng.github.io/software/api/repos/github/seeh/surprise"}, {"uid": "github/timothyas/xesn", "html_url": "https://rseng.github.io/software/repository/github/timothyas/xesn", "api_url": "https://rseng.github.io/software/api/repos/github/timothyas/xesn"}, {"uid": "github/mslonina/Mechanic", "html_url": "https://rseng.github.io/software/repository/github/mslonina/Mechanic", "api_url": "https://rseng.github.io/software/api/repos/github/mslonina/Mechanic"}, {"uid": "github/SynxFlow/SynxFlow", "html_url": "https://rseng.github.io/software/repository/github/SynxFlow/SynxFlow", "api_url": "https://rseng.github.io/software/api/repos/github/SynxFlow/SynxFlow"}, {"uid": "github/EIT-ALIVE/eitprocessing", "html_url": "https://rseng.github.io/software/repository/github/EIT-ALIVE/eitprocessing", "api_url": "https://rseng.github.io/software/api/repos/github/EIT-ALIVE/eitprocessing"}, {"uid": "github/ConorMacBride/mcalf", "html_url": "https://rseng.github.io/software/repository/github/ConorMacBride/mcalf", "api_url": "https://rseng.github.io/software/api/repos/github/ConorMacBride/mcalf"}, {"uid": "github/Bonfanti88/MCMCI", "html_url": "https://rseng.github.io/software/repository/github/Bonfanti88/MCMCI", "api_url": "https://rseng.github.io/software/api/repos/github/Bonfanti88/MCMCI"}, {"uid": "github/huangnengCSU/compleasm", "html_url": "https://rseng.github.io/software/repository/github/huangnengCSU/compleasm", "api_url": "https://rseng.github.io/software/api/repos/github/huangnengCSU/compleasm"}, {"uid": "github/benjaminbolling/DynaGUI", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/DynaGUI", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/DynaGUI"}, {"uid": "github/benjaminbolling/RSW", "html_url": "https://rseng.github.io/software/repository/github/benjaminbolling/RSW", "api_url": "https://rseng.github.io/software/api/repos/github/benjaminbolling/RSW"}, {"uid": "github/mmp2/megaman", "html_url": "https://rseng.github.io/software/repository/github/mmp2/megaman", "api_url": "https://rseng.github.io/software/api/repos/github/mmp2/megaman"}, {"uid": "github/jmd-dk/concept", "html_url": "https://rseng.github.io/software/repository/github/jmd-dk/concept", "api_url": "https://rseng.github.io/software/api/repos/github/jmd-dk/concept"}, {"uid": "github/EpistasisLab/tpot", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/tpot", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/tpot"}, {"uid": "github/EpistasisLab/regens", "html_url": "https://rseng.github.io/software/repository/github/EpistasisLab/regens", "api_url": "https://rseng.github.io/software/api/repos/github/EpistasisLab/regens"}, {"uid": "github/PrincetonUniversity/athena", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/athena", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/athena"}, {"uid": "github/PrincetonUniversity/Athena-Cversion", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/Athena-Cversion", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/Athena-Cversion"}, {"uid": "github/PrincetonUniversity/FastTemplatePeriodogram", "html_url": "https://rseng.github.io/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", "api_url": "https://rseng.github.io/software/api/repos/github/PrincetonUniversity/FastTemplatePeriodogram"}, {"uid": "github/shirtsgroup/physical_validation", "html_url": "https://rseng.github.io/software/repository/github/shirtsgroup/physical_validation", "api_url": "https://rseng.github.io/software/api/repos/github/shirtsgroup/physical_validation"}, {"uid": "github/jeschaef/Graph4Med", "html_url": "https://rseng.github.io/software/repository/github/jeschaef/Graph4Med", "api_url": "https://rseng.github.io/software/api/repos/github/jeschaef/Graph4Med"}, {"uid": "github/pinellolab/CRISPRitz", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPRitz", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPRitz"}, {"uid": "github/pinellolab/CRISPResso2", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/CRISPResso2", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/CRISPResso2"}, {"uid": "github/pinellolab/STREAM", "html_url": "https://rseng.github.io/software/repository/github/pinellolab/STREAM", "api_url": "https://rseng.github.io/software/api/repos/github/pinellolab/STREAM"}, {"uid": "github/heatherprince/cosmoped", "html_url": "https://rseng.github.io/software/repository/github/heatherprince/cosmoped", "api_url": "https://rseng.github.io/software/api/repos/github/heatherprince/cosmoped"}, {"uid": "github/robashaw/libecpint", "html_url": "https://rseng.github.io/software/repository/github/robashaw/libecpint", "api_url": "https://rseng.github.io/software/api/repos/github/robashaw/libecpint"}, {"uid": "github/mildpiggy/DEP2", "html_url": "https://rseng.github.io/software/repository/github/mildpiggy/DEP2", "api_url": "https://rseng.github.io/software/api/repos/github/mildpiggy/DEP2"}, {"uid": "github/gagneurlab/drop", "html_url": "https://rseng.github.io/software/repository/github/gagneurlab/drop", "api_url": "https://rseng.github.io/software/api/repos/github/gagneurlab/drop"}, {"uid": "github/nbarbey/TomograPy", "html_url": "https://rseng.github.io/software/repository/github/nbarbey/TomograPy", "api_url": "https://rseng.github.io/software/api/repos/github/nbarbey/TomograPy"}, {"uid": "github/ahudde/greeks", "html_url": "https://rseng.github.io/software/repository/github/ahudde/greeks", "api_url": "https://rseng.github.io/software/api/repos/github/ahudde/greeks"}, {"uid": "github/tzhu-bio/UMI-ATAC-seq", "html_url": "https://rseng.github.io/software/repository/github/tzhu-bio/UMI-ATAC-seq", "api_url": "https://rseng.github.io/software/api/repos/github/tzhu-bio/UMI-ATAC-seq"}, {"uid": "github/babinyurii/recan", "html_url": "https://rseng.github.io/software/repository/github/babinyurii/recan", "api_url": "https://rseng.github.io/software/api/repos/github/babinyurii/recan"}, {"uid": "github/ArkajyotiSaha/RandomForestsGLS", "html_url": "https://rseng.github.io/software/repository/github/ArkajyotiSaha/RandomForestsGLS", "api_url": "https://rseng.github.io/software/api/repos/github/ArkajyotiSaha/RandomForestsGLS"}, {"uid": "github/CATG-Github/panscan", "html_url": "https://rseng.github.io/software/repository/github/CATG-Github/panscan", "api_url": "https://rseng.github.io/software/api/repos/github/CATG-Github/panscan"}, {"uid": "github/Ayuei/DeBEIR", "html_url": "https://rseng.github.io/software/repository/github/Ayuei/DeBEIR", "api_url": "https://rseng.github.io/software/api/repos/github/Ayuei/DeBEIR"}, {"uid": "github/bccp/nbodykit", "html_url": "https://rseng.github.io/software/repository/github/bccp/nbodykit", "api_url": "https://rseng.github.io/software/api/repos/github/bccp/nbodykit"}, {"uid": "github/nwchemgit/nwchem", "html_url": "https://rseng.github.io/software/repository/github/nwchemgit/nwchem", "api_url": "https://rseng.github.io/software/api/repos/github/nwchemgit/nwchem"}, {"uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "html_url": "https://rseng.github.io/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", "api_url": "https://rseng.github.io/software/api/repos/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-"}, {"uid": "github/brinckmann/montepython_public", "html_url": "https://rseng.github.io/software/repository/github/brinckmann/montepython_public", "api_url": "https://rseng.github.io/software/api/repos/github/brinckmann/montepython_public"}, {"uid": "github/CliMA/CalibrateEmulateSample.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/CalibrateEmulateSample.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/CalibrateEmulateSample.jl"}, {"uid": "github/CliMA/EnsembleKalmanProcesses.jl", "html_url": "https://rseng.github.io/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", "api_url": "https://rseng.github.io/software/api/repos/github/CliMA/EnsembleKalmanProcesses.jl"}, {"uid": "github/mazzalab/pyntacle", "html_url": "https://rseng.github.io/software/repository/github/mazzalab/pyntacle", "api_url": "https://rseng.github.io/software/api/repos/github/mazzalab/pyntacle"}, {"uid": "github/MarioRomeroC/Mixclask", "html_url": "https://rseng.github.io/software/repository/github/MarioRomeroC/Mixclask", "api_url": "https://rseng.github.io/software/api/repos/github/MarioRomeroC/Mixclask"}, {"uid": "github/ExObsSim/ExoRad2-public", "html_url": "https://rseng.github.io/software/repository/github/ExObsSim/ExoRad2-public", "api_url": "https://rseng.github.io/software/api/repos/github/ExObsSim/ExoRad2-public"}, {"uid": "github/SzokeMark-Andor/AstroDataProcessing", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/AstroDataProcessing", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/AstroDataProcessing"}, {"uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "html_url": "https://rseng.github.io/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", "api_url": "https://rseng.github.io/software/api/repos/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy"}, {"uid": "github/ProjectPyRhO/PyRhO", "html_url": "https://rseng.github.io/software/repository/github/ProjectPyRhO/PyRhO", "api_url": "https://rseng.github.io/software/api/repos/github/ProjectPyRhO/PyRhO"}, {"uid": "github/yangyongsan-bio/GREAP", "html_url": "https://rseng.github.io/software/repository/github/yangyongsan-bio/GREAP", "api_url": "https://rseng.github.io/software/api/repos/github/yangyongsan-bio/GREAP"}, {"uid": "github/agreenbaum/gsgs", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/gsgs", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/gsgs"}, {"uid": "github/agreenbaum/ImPlaneIA", "html_url": "https://rseng.github.io/software/repository/github/agreenbaum/ImPlaneIA", "api_url": "https://rseng.github.io/software/api/repos/github/agreenbaum/ImPlaneIA"}, {"uid": "github/nnssa/gallumi_public", "html_url": "https://rseng.github.io/software/repository/github/nnssa/gallumi_public", "api_url": "https://rseng.github.io/software/api/repos/github/nnssa/gallumi_public"}, {"uid": "github/dirac-institute/asterogap", "html_url": "https://rseng.github.io/software/repository/github/dirac-institute/asterogap", "api_url": "https://rseng.github.io/software/api/repos/github/dirac-institute/asterogap"}, {"uid": "github/elsner/arkcos", "html_url": "https://rseng.github.io/software/repository/github/elsner/arkcos", "api_url": "https://rseng.github.io/software/api/repos/github/elsner/arkcos"}, {"uid": "github/SPARC-X/SPARC-X-API", "html_url": "https://rseng.github.io/software/repository/github/SPARC-X/SPARC-X-API", "api_url": "https://rseng.github.io/software/api/repos/github/SPARC-X/SPARC-X-API"}, {"uid": "github/coolneighbors/unwise-verse", "html_url": "https://rseng.github.io/software/repository/github/coolneighbors/unwise-verse", "api_url": "https://rseng.github.io/software/api/repos/github/coolneighbors/unwise-verse"}, {"uid": "github/ajeldorado/falco-python", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-python", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-python"}, {"uid": "github/ajeldorado/falco-matlab", "html_url": "https://rseng.github.io/software/repository/github/ajeldorado/falco-matlab", "api_url": "https://rseng.github.io/software/api/repos/github/ajeldorado/falco-matlab"}, {"uid": "github/Qiskit/rustworkx", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/rustworkx", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/rustworkx"}, {"uid": "github/Qiskit/qiskit-experiments", "html_url": "https://rseng.github.io/software/repository/github/Qiskit/qiskit-experiments", "api_url": "https://rseng.github.io/software/api/repos/github/Qiskit/qiskit-experiments"}, {"uid": "github/deepskies/DeepBench", "html_url": "https://rseng.github.io/software/repository/github/deepskies/DeepBench", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/DeepBench"}, {"uid": "github/deepskies/deeplenstronomy", "html_url": "https://rseng.github.io/software/repository/github/deepskies/deeplenstronomy", "api_url": "https://rseng.github.io/software/api/repos/github/deepskies/deeplenstronomy"}, {"uid": "github/fbreitwieser/krakenuniq", "html_url": "https://rseng.github.io/software/repository/github/fbreitwieser/krakenuniq", "api_url": "https://rseng.github.io/software/api/repos/github/fbreitwieser/krakenuniq"}, {"uid": "github/lab-medvedeva/GADES-main", "html_url": "https://rseng.github.io/software/repository/github/lab-medvedeva/GADES-main", "api_url": "https://rseng.github.io/software/api/repos/github/lab-medvedeva/GADES-main"}, {"uid": "github/HorvathLab/ReQTL", "html_url": "https://rseng.github.io/software/repository/github/HorvathLab/ReQTL", "api_url": "https://rseng.github.io/software/api/repos/github/HorvathLab/ReQTL"}, {"uid": "github/pirovc/ganon_benchmark", "html_url": "https://rseng.github.io/software/repository/github/pirovc/ganon_benchmark", "api_url": "https://rseng.github.io/software/api/repos/github/pirovc/ganon_benchmark"}, {"uid": "github/ChrisBeaumont/brut", "html_url": "https://rseng.github.io/software/repository/github/ChrisBeaumont/brut", "api_url": "https://rseng.github.io/software/api/repos/github/ChrisBeaumont/brut"}, {"uid": "github/potree/PotreeConverter", "html_url": "https://rseng.github.io/software/repository/github/potree/PotreeConverter", "api_url": "https://rseng.github.io/software/api/repos/github/potree/PotreeConverter"}, {"uid": "github/seahorce-scidac/REMORA", "html_url": "https://rseng.github.io/software/repository/github/seahorce-scidac/REMORA", "api_url": "https://rseng.github.io/software/api/repos/github/seahorce-scidac/REMORA"}, {"uid": "github/florpi/sunbird", "html_url": "https://rseng.github.io/software/repository/github/florpi/sunbird", "api_url": "https://rseng.github.io/software/api/repos/github/florpi/sunbird"}, {"uid": "github/theislab/scCODA", "html_url": "https://rseng.github.io/software/repository/github/theislab/scCODA", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scCODA"}, {"uid": "github/theislab/scanpy", "html_url": "https://rseng.github.io/software/repository/github/theislab/scanpy", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scanpy"}, {"uid": "github/theislab/scvelo", "html_url": "https://rseng.github.io/software/repository/github/theislab/scvelo", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/scvelo"}, {"uid": "github/theislab/cellrank", "html_url": "https://rseng.github.io/software/repository/github/theislab/cellrank", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/cellrank"}, {"uid": "github/theislab/anndata", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata"}, {"uid": "github/theislab/anndata2ri", "html_url": "https://rseng.github.io/software/repository/github/theislab/anndata2ri", "api_url": "https://rseng.github.io/software/api/repos/github/theislab/anndata2ri"}, {"uid": "github/Ecos-platform/ecos", "html_url": "https://rseng.github.io/software/repository/github/Ecos-platform/ecos", "api_url": "https://rseng.github.io/software/api/repos/github/Ecos-platform/ecos"}, {"uid": "github/dealii/dealii", "html_url": "https://rseng.github.io/software/repository/github/dealii/dealii", "api_url": "https://rseng.github.io/software/api/repos/github/dealii/dealii"}, {"uid": "github/harvard-nrg/scanbuddy", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/scanbuddy", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/scanbuddy"}, {"uid": "github/harvard-nrg/dwiqc", "html_url": "https://rseng.github.io/software/repository/github/harvard-nrg/dwiqc", "api_url": "https://rseng.github.io/software/api/repos/github/harvard-nrg/dwiqc"}, {"uid": "github/guaix-ucm/megaradrp", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/megaradrp", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/megaradrp"}, {"uid": "github/guaix-ucm/numina", "html_url": "https://rseng.github.io/software/repository/github/guaix-ucm/numina", "api_url": "https://rseng.github.io/software/api/repos/github/guaix-ucm/numina"}, {"uid": "github/Stat-Cook/deident", "html_url": "https://rseng.github.io/software/repository/github/Stat-Cook/deident", "api_url": "https://rseng.github.io/software/api/repos/github/Stat-Cook/deident"}, {"uid": "github/SALT-NIRWALS/nirwals", "html_url": "https://rseng.github.io/software/repository/github/SALT-NIRWALS/nirwals", "api_url": "https://rseng.github.io/software/api/repos/github/SALT-NIRWALS/nirwals"}, {"uid": "github/EoRImaging/FHD", "html_url": "https://rseng.github.io/software/repository/github/EoRImaging/FHD", "api_url": "https://rseng.github.io/software/api/repos/github/EoRImaging/FHD"}, {"uid": "github/BioComputingUP/ring-pymol", "html_url": "https://rseng.github.io/software/repository/github/BioComputingUP/ring-pymol", "api_url": "https://rseng.github.io/software/api/repos/github/BioComputingUP/ring-pymol"}, {"uid": "github/uwsbel/low-fidelity-dynamic-models", "html_url": "https://rseng.github.io/software/repository/github/uwsbel/low-fidelity-dynamic-models", "api_url": "https://rseng.github.io/software/api/repos/github/uwsbel/low-fidelity-dynamic-models"}, {"uid": "github/DeepMIALab/UC-NfNet", "html_url": "https://rseng.github.io/software/repository/github/DeepMIALab/UC-NfNet", "api_url": "https://rseng.github.io/software/api/repos/github/DeepMIALab/UC-NfNet"}, {"uid": "github/GilbertLabUCSF/CanDI", "html_url": "https://rseng.github.io/software/repository/github/GilbertLabUCSF/CanDI", "api_url": "https://rseng.github.io/software/api/repos/github/GilbertLabUCSF/CanDI"}, {"uid": "github/kboone/parsnip", "html_url": "https://rseng.github.io/software/repository/github/kboone/parsnip", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/parsnip"}, {"uid": "github/kboone/avocado", "html_url": "https://rseng.github.io/software/repository/github/kboone/avocado", "api_url": "https://rseng.github.io/software/api/repos/github/kboone/avocado"}, {"uid": "github/nlesc-dirac/sagecal", "html_url": "https://rseng.github.io/software/repository/github/nlesc-dirac/sagecal", "api_url": "https://rseng.github.io/software/api/repos/github/nlesc-dirac/sagecal"}, {"uid": "github/felixchenier/kineticstoolkit", "html_url": "https://rseng.github.io/software/repository/github/felixchenier/kineticstoolkit", "api_url": "https://rseng.github.io/software/api/repos/github/felixchenier/kineticstoolkit"}, {"uid": "github/dzesmin/TEA", "html_url": "https://rseng.github.io/software/repository/github/dzesmin/TEA", "api_url": "https://rseng.github.io/software/api/repos/github/dzesmin/TEA"}, {"uid": "github/pwry/lextes", "html_url": "https://rseng.github.io/software/repository/github/pwry/lextes", "api_url": "https://rseng.github.io/software/api/repos/github/pwry/lextes"}, {"uid": "github/czbiohub-sf/Rapid-QC-MS", "html_url": "https://rseng.github.io/software/repository/github/czbiohub-sf/Rapid-QC-MS", "api_url": "https://rseng.github.io/software/api/repos/github/czbiohub-sf/Rapid-QC-MS"}, {"uid": "github/sonny-harman/snowball", "html_url": "https://rseng.github.io/software/repository/github/sonny-harman/snowball", "api_url": "https://rseng.github.io/software/api/repos/github/sonny-harman/snowball"}, {"uid": "github/bcjaeger/aorsf", "html_url": "https://rseng.github.io/software/repository/github/bcjaeger/aorsf", "api_url": "https://rseng.github.io/software/api/repos/github/bcjaeger/aorsf"}] diff --git a/docs/api/repos/parser/gitlab/index.json b/docs/api/repos/parser/gitlab/index.json index 9abbe207c..57968cdee 100644 --- a/docs/api/repos/parser/gitlab/index.json +++ b/docs/api/repos/parser/gitlab/index.json @@ -1 +1 @@ -[{"uid": "gitlab/cirad-apps/phylostems", "html_url": "https://rseng.github.io/software/repository/gitlab/cirad-apps/phylostems", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cirad-apps/phylostems"}, {"uid": "gitlab/mcfuman/SpectraPy", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfuman/SpectraPy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfuman/SpectraPy"}, {"uid": "gitlab/sissopp_developers/sissopp", "html_url": "https://rseng.github.io/software/repository/gitlab/sissopp_developers/sissopp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sissopp_developers/sissopp"}, {"uid": "gitlab/dglaeser/fieldcompare", "html_url": "https://rseng.github.io/software/repository/gitlab/dglaeser/fieldcompare", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dglaeser/fieldcompare"}, {"uid": "gitlab/chiemotono/mdcontactcom", "html_url": "https://rseng.github.io/software/repository/gitlab/chiemotono/mdcontactcom", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chiemotono/mdcontactcom"}, {"uid": "gitlab/andreas.andrusch/paipline", "html_url": "https://rseng.github.io/software/repository/gitlab/andreas.andrusch/paipline", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andreas.andrusch/paipline"}, {"uid": "gitlab/paulklemm_PHD/proteinortho", "html_url": "https://rseng.github.io/software/repository/gitlab/paulklemm_PHD/proteinortho", "api_url": "https://rseng.github.io/software/api/repos/gitlab/paulklemm_PHD/proteinortho"}, {"uid": "gitlab/rahmannlab/episegmix", "html_url": "https://rseng.github.io/software/repository/gitlab/rahmannlab/episegmix", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rahmannlab/episegmix"}, {"uid": "gitlab/cmbm-ethz/miop", "html_url": "https://rseng.github.io/software/repository/gitlab/cmbm-ethz/miop", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cmbm-ethz/miop"}, {"uid": "gitlab/chaver/choco-mining", "html_url": "https://rseng.github.io/software/repository/gitlab/chaver/choco-mining", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chaver/choco-mining"}, {"uid": "gitlab/remikz/nccmp", "html_url": "https://rseng.github.io/software/repository/gitlab/remikz/nccmp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remikz/nccmp"}, {"uid": "gitlab/moerman1/fhi-cc4s", "html_url": "https://rseng.github.io/software/repository/gitlab/moerman1/fhi-cc4s", "api_url": "https://rseng.github.io/software/api/repos/gitlab/moerman1/fhi-cc4s"}, {"uid": "gitlab/pvst/asi", "html_url": "https://rseng.github.io/software/repository/gitlab/pvst/asi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pvst/asi"}, {"uid": "gitlab/souvlaki/thalassa", "html_url": "https://rseng.github.io/software/repository/gitlab/souvlaki/thalassa", "api_url": "https://rseng.github.io/software/api/repos/gitlab/souvlaki/thalassa"}, {"uid": "gitlab/JuditGG/trumpetplots", "html_url": "https://rseng.github.io/software/repository/gitlab/JuditGG/trumpetplots", "api_url": "https://rseng.github.io/software/api/repos/gitlab/JuditGG/trumpetplots"}, {"uid": "gitlab/jerrytheo16/exoplanet", "html_url": "https://rseng.github.io/software/repository/gitlab/jerrytheo16/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jerrytheo16/exoplanet"}, {"uid": "gitlab/treangenlab/vulcan", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/vulcan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/vulcan"}, {"uid": "gitlab/treangenlab/emu", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/emu"}, {"uid": "gitlab/project-dare/dare-platform", "html_url": "https://rseng.github.io/software/repository/gitlab/project-dare/dare-platform", "api_url": "https://rseng.github.io/software/api/repos/gitlab/project-dare/dare-platform"}, {"uid": "gitlab/clairedavies/sedbys", "html_url": "https://rseng.github.io/software/repository/gitlab/clairedavies/sedbys", "api_url": "https://rseng.github.io/software/api/repos/gitlab/clairedavies/sedbys"}, {"uid": "gitlab/gims-developers/gims", "html_url": "https://rseng.github.io/software/repository/gitlab/gims-developers/gims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gims-developers/gims"}, {"uid": "gitlab/astron-idg/idg", "html_url": "https://rseng.github.io/software/repository/gitlab/astron-idg/idg", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astron-idg/idg"}, {"uid": "gitlab/jesseds/apav", "html_url": "https://rseng.github.io/software/repository/gitlab/jesseds/apav", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jesseds/apav"}, {"uid": "gitlab/pipe3d/pyPipe3D", "html_url": "https://rseng.github.io/software/repository/gitlab/pipe3d/pyPipe3D", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pipe3d/pyPipe3D"}, {"uid": "gitlab/geekysquirrel/bigx", "html_url": "https://rseng.github.io/software/repository/gitlab/geekysquirrel/bigx", "api_url": "https://rseng.github.io/software/api/repos/gitlab/geekysquirrel/bigx"}, {"uid": "gitlab/binary_c/binary_c-python", "html_url": "https://rseng.github.io/software/repository/gitlab/binary_c/binary_c-python", "api_url": "https://rseng.github.io/software/api/repos/gitlab/binary_c/binary_c-python"}, {"uid": "gitlab/jason-rumengan/pyarma", "html_url": "https://rseng.github.io/software/repository/gitlab/jason-rumengan/pyarma", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jason-rumengan/pyarma"}, {"uid": "gitlab/aroffringa/wsclean", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/wsclean", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/wsclean"}, {"uid": "gitlab/aroffringa/aoflagger", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/aoflagger", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/aoflagger"}, {"uid": "gitlab/open-darts/open-darts", "html_url": "https://rseng.github.io/software/repository/gitlab/open-darts/open-darts", "api_url": "https://rseng.github.io/software/api/repos/gitlab/open-darts/open-darts"}, {"uid": "gitlab/ffaucher/hawen", "html_url": "https://rseng.github.io/software/repository/gitlab/ffaucher/hawen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ffaucher/hawen"}, {"uid": "gitlab/groimp-plugins/Pointcloud", "html_url": "https://rseng.github.io/software/repository/gitlab/groimp-plugins/Pointcloud", "api_url": "https://rseng.github.io/software/api/repos/gitlab/groimp-plugins/Pointcloud"}, {"uid": "gitlab/casi-project/casi-2d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-2d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-2d"}, {"uid": "gitlab/casi-project/casi-3d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-3d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-3d"}, {"uid": "gitlab/aegge/comet-emu", "html_url": "https://rseng.github.io/software/repository/gitlab/aegge/comet-emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aegge/comet-emu"}, {"uid": "gitlab/mule-tools/package-x", "html_url": "https://rseng.github.io/software/repository/gitlab/mule-tools/package-x", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mule-tools/package-x"}, {"uid": "gitlab/elsi_project/elsi_interface", "html_url": "https://rseng.github.io/software/repository/gitlab/elsi_project/elsi_interface", "api_url": "https://rseng.github.io/software/api/repos/gitlab/elsi_project/elsi_interface"}, {"uid": "gitlab/leelamichaels/Omega", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Omega", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Omega"}, {"uid": "gitlab/leelamichaels/Elysium", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Elysium", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Elysium"}, {"uid": "gitlab/leelamichaels/Infinity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Infinity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Infinity"}, {"uid": "gitlab/leelamichaels/Tranquillity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Tranquillity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Tranquillity"}, {"uid": "gitlab/leelamichaels/Burning_Arrow", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Burning_Arrow", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Burning_Arrow"}, {"uid": "gitlab/joseaher/astroplotlib", "html_url": "https://rseng.github.io/software/repository/gitlab/joseaher/astroplotlib", "api_url": "https://rseng.github.io/software/api/repos/gitlab/joseaher/astroplotlib"}, {"uid": "gitlab/rki_bioinformatics/IDeFIX", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/IDeFIX", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/IDeFIX"}, {"uid": "gitlab/rki_bioinformatics/purple", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/purple", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/purple"}, {"uid": "gitlab/rki_bioinformatics/HiLive2", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/HiLive2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/HiLive2"}, {"uid": "gitlab/mobse/source-code", "html_url": "https://rseng.github.io/software/repository/gitlab/mobse/source-code", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mobse/source-code"}, {"uid": "gitlab/octopus-code/octopus", "html_url": "https://rseng.github.io/software/repository/gitlab/octopus-code/octopus", "api_url": "https://rseng.github.io/software/api/repos/gitlab/octopus-code/octopus"}, {"uid": "gitlab/etienne.behar/menura", "html_url": "https://rseng.github.io/software/repository/gitlab/etienne.behar/menura", "api_url": "https://rseng.github.io/software/api/repos/gitlab/etienne.behar/menura"}, {"uid": "gitlab/chjordan/sslf", "html_url": "https://rseng.github.io/software/repository/gitlab/chjordan/sslf", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chjordan/sslf"}, {"uid": "gitlab/fibreglass/pivc", "html_url": "https://rseng.github.io/software/repository/gitlab/fibreglass/pivc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fibreglass/pivc"}, {"uid": "gitlab/multigris/mgris", "html_url": "https://rseng.github.io/software/repository/gitlab/multigris/mgris", "api_url": "https://rseng.github.io/software/api/repos/gitlab/multigris/mgris"}, {"uid": "gitlab/mcfrith/lamassemble", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/lamassemble", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/lamassemble"}, {"uid": "gitlab/mcfrith/tantan", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/tantan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/tantan"}, {"uid": "gitlab/mcfrith/last", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/last", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/last"}, {"uid": "gitlab/mcfrith/paraclu", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/paraclu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/paraclu"}, {"uid": "gitlab/vibes-developers/vibes", "html_url": "https://rseng.github.io/software/repository/gitlab/vibes-developers/vibes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vibes-developers/vibes"}, {"uid": "gitlab/pythia-uq/pythia", "html_url": "https://rseng.github.io/software/repository/gitlab/pythia-uq/pythia", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pythia-uq/pythia"}, {"uid": "gitlab/materials-modeling/calorine", "html_url": "https://rseng.github.io/software/repository/gitlab/materials-modeling/calorine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/materials-modeling/calorine"}, {"uid": "gitlab/sybreton/apollinaire", "html_url": "https://rseng.github.io/software/repository/gitlab/sybreton/apollinaire", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sybreton/apollinaire"}, {"uid": "gitlab/cosmograil/starred", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/starred", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/starred"}, {"uid": "gitlab/cosmograil/PyCS3", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/PyCS3", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/PyCS3"}, {"uid": "gitlab/djsmithbham/cnearest", "html_url": "https://rseng.github.io/software/repository/gitlab/djsmithbham/cnearest", "api_url": "https://rseng.github.io/software/api/repos/gitlab/djsmithbham/cnearest"}, {"uid": "gitlab/metafundev/metafun", "html_url": "https://rseng.github.io/software/repository/gitlab/metafundev/metafun", "api_url": "https://rseng.github.io/software/api/repos/gitlab/metafundev/metafun"}, {"uid": "gitlab/medbio/disgenet2r", "html_url": "https://rseng.github.io/software/repository/gitlab/medbio/disgenet2r", "api_url": "https://rseng.github.io/software/api/repos/gitlab/medbio/disgenet2r"}, {"uid": "gitlab/cosapp/cosapp", "html_url": "https://rseng.github.io/software/repository/gitlab/cosapp/cosapp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosapp/cosapp"}, {"uid": "gitlab/mauricemolli/petitRADTRANS", "html_url": "https://rseng.github.io/software/repository/gitlab/mauricemolli/petitRADTRANS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mauricemolli/petitRADTRANS"}, {"uid": "gitlab/ChemBioHub/tpmap", "html_url": "https://rseng.github.io/software/repository/gitlab/ChemBioHub/tpmap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ChemBioHub/tpmap"}, {"uid": "gitlab/astrogal/slideParam", "html_url": "https://rseng.github.io/software/repository/gitlab/astrogal/slideParam", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astrogal/slideParam"}, {"uid": "gitlab/dalton/dalton", "html_url": "https://rseng.github.io/software/repository/gitlab/dalton/dalton", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dalton/dalton"}, {"uid": "gitlab/cracklet/cracklet", "html_url": "https://rseng.github.io/software/repository/gitlab/cracklet/cracklet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cracklet/cracklet"}, {"uid": "gitlab/petsc/petsc", "html_url": "https://rseng.github.io/software/repository/gitlab/petsc/petsc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/petsc/petsc"}, {"uid": "gitlab/thartwig/asloth", "html_url": "https://rseng.github.io/software/repository/gitlab/thartwig/asloth", "api_url": "https://rseng.github.io/software/api/repos/gitlab/thartwig/asloth"}, {"uid": "gitlab/german.tischler/libmaus2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/libmaus2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/libmaus2"}, {"uid": "gitlab/german.tischler/biobambam2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/biobambam2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/biobambam2"}, {"uid": "gitlab/mainlabwsu/bims", "html_url": "https://rseng.github.io/software/repository/gitlab/mainlabwsu/bims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mainlabwsu/bims"}, {"uid": "gitlab/cosmology-ethz/ufig", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmology-ethz/ufig", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmology-ethz/ufig"}, {"uid": "gitlab/ezlab/busco", "html_url": "https://rseng.github.io/software/repository/gitlab/ezlab/busco", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ezlab/busco"}, {"uid": "gitlab/kmrajwade/iqrm_apollo", "html_url": "https://rseng.github.io/software/repository/gitlab/kmrajwade/iqrm_apollo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/kmrajwade/iqrm_apollo"}, {"uid": "gitlab/sigcorr/sigcorr", "html_url": "https://rseng.github.io/software/repository/gitlab/sigcorr/sigcorr", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sigcorr/sigcorr"}, {"uid": "gitlab/ComputationalScience/idinn", "html_url": "https://rseng.github.io/software/repository/gitlab/ComputationalScience/idinn", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ComputationalScience/idinn"}, {"uid": "gitlab/loic.cg.rossi/pymiedap", "html_url": "https://rseng.github.io/software/repository/gitlab/loic.cg.rossi/pymiedap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/loic.cg.rossi/pymiedap"}, {"uid": "gitlab/davidwoodburn/r3f", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/r3f", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/r3f"}, {"uid": "gitlab/davidwoodburn/itrm", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/itrm", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/itrm"}, {"uid": "gitlab/AstroVian/bmarxiv", "html_url": "https://rseng.github.io/software/repository/gitlab/AstroVian/bmarxiv", "api_url": "https://rseng.github.io/software/api/repos/gitlab/AstroVian/bmarxiv"}, {"uid": "gitlab/vincent-sater/umigen", "html_url": "https://rseng.github.io/software/repository/gitlab/vincent-sater/umigen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vincent-sater/umigen"}, {"uid": "gitlab/ostrokach/proteinsolver", "html_url": "https://rseng.github.io/software/repository/gitlab/ostrokach/proteinsolver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ostrokach/proteinsolver"}, {"uid": "gitlab/RKIBioinformaticsPipelines/QCumber", "html_url": "https://rseng.github.io/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", "api_url": "https://rseng.github.io/software/api/repos/gitlab/RKIBioinformaticsPipelines/QCumber"}, {"uid": "gitlab/Molcas/OpenMolcas", "html_url": "https://rseng.github.io/software/repository/gitlab/Molcas/OpenMolcas", "api_url": "https://rseng.github.io/software/api/repos/gitlab/Molcas/OpenMolcas"}, {"uid": "gitlab/imoralc/malu-ifs-visualization-tool", "html_url": "https://rseng.github.io/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", "api_url": "https://rseng.github.io/software/api/repos/gitlab/imoralc/malu-ifs-visualization-tool"}, {"uid": "gitlab/remram44/taguette", "html_url": "https://rseng.github.io/software/repository/gitlab/remram44/taguette", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remram44/taguette"}, {"uid": "gitlab/davidtourigny/dynamic-fba", "html_url": "https://rseng.github.io/software/repository/gitlab/davidtourigny/dynamic-fba", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidtourigny/dynamic-fba"}, {"uid": "gitlab/ENKI-portal/ThermoCodegen", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoCodegen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoCodegen"}, {"uid": "gitlab/ENKI-portal/vaporock", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/vaporock", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/vaporock"}, {"uid": "gitlab/ENKI-portal/ThermoEngine", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoEngine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoEngine"}, {"uid": "gitlab/chrjan/seq-seq-pan", "html_url": "https://rseng.github.io/software/repository/gitlab/chrjan/seq-seq-pan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chrjan/seq-seq-pan"}, {"uid": "gitlab/bu_cnio/vulcanspot", "html_url": "https://rseng.github.io/software/repository/gitlab/bu_cnio/vulcanspot", "api_url": "https://rseng.github.io/software/api/repos/gitlab/bu_cnio/vulcanspot"}, {"uid": "gitlab/BioimageInformaticsGroup/openphi", "html_url": "https://rseng.github.io/software/repository/gitlab/BioimageInformaticsGroup/openphi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/BioimageInformaticsGroup/openphi"}, {"uid": "gitlab/robizzard/libcdict", "html_url": "https://rseng.github.io/software/repository/gitlab/robizzard/libcdict", "api_url": "https://rseng.github.io/software/api/repos/gitlab/robizzard/libcdict"}, {"uid": "gitlab/emd-dev/emd", "html_url": "https://rseng.github.io/software/repository/gitlab/emd-dev/emd", "api_url": "https://rseng.github.io/software/api/repos/gitlab/emd-dev/emd"}, {"uid": "gitlab/sevecekp/sph", "html_url": "https://rseng.github.io/software/repository/gitlab/sevecekp/sph", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sevecekp/sph"}, {"uid": "gitlab/fduchate/predihood", "html_url": "https://rseng.github.io/software/repository/gitlab/fduchate/predihood", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fduchate/predihood"}, {"uid": "gitlab/andresruiz/Sparkling", "html_url": "https://rseng.github.io/software/repository/gitlab/andresruiz/Sparkling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andresruiz/Sparkling"}, {"uid": "gitlab/dsbowen/conditional-inference", "html_url": "https://rseng.github.io/software/repository/gitlab/dsbowen/conditional-inference", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dsbowen/conditional-inference"}, {"uid": "gitlab/pyFBS/pyFBS", "html_url": "https://rseng.github.io/software/repository/gitlab/pyFBS/pyFBS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pyFBS/pyFBS"}, {"uid": "gitlab/InspectorCell/inspectorcell", "html_url": "https://rseng.github.io/software/repository/gitlab/InspectorCell/inspectorcell", "api_url": "https://rseng.github.io/software/api/repos/gitlab/InspectorCell/inspectorcell"}, {"uid": "gitlab/magnumpi/magnumpi", "html_url": "https://rseng.github.io/software/repository/gitlab/magnumpi/magnumpi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/magnumpi/magnumpi"}, {"uid": "gitlab/gpagano/lensinggw", "html_url": "https://rseng.github.io/software/repository/gitlab/gpagano/lensinggw", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gpagano/lensinggw"}, {"uid": "gitlab/wpettersson/kep_solver", "html_url": "https://rseng.github.io/software/repository/gitlab/wpettersson/kep_solver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/wpettersson/kep_solver"}, {"uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", "html_url": "https://rseng.github.io/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", "api_url": "https://rseng.github.io/software/api/repos/gitlab/MartinBeseda/sa-oo-vqe-qiskit"}, {"uid": "gitlab/ampere2/metalwalls", "html_url": "https://rseng.github.io/software/repository/gitlab/ampere2/metalwalls", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ampere2/metalwalls"}, {"uid": "gitlab/random-quintessence/random-quintessence", "html_url": "https://rseng.github.io/software/repository/gitlab/random-quintessence/random-quintessence", "api_url": "https://rseng.github.io/software/api/repos/gitlab/random-quintessence/random-quintessence"}, {"uid": "gitlab/polmag/P-CORONA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/P-CORONA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/P-CORONA"}, {"uid": "gitlab/polmag/PORTA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/PORTA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/PORTA"}, {"uid": "gitlab/picos-api/picos", "html_url": "https://rseng.github.io/software/repository/gitlab/picos-api/picos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/picos-api/picos"}, {"uid": "gitlab/mbiagetti/persistent_homology_lss", "html_url": "https://rseng.github.io/software/repository/gitlab/mbiagetti/persistent_homology_lss", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mbiagetti/persistent_homology_lss"}, {"uid": "gitlab/libreumg/dataquier", "html_url": "https://rseng.github.io/software/repository/gitlab/libreumg/dataquier", "api_url": "https://rseng.github.io/software/api/repos/gitlab/libreumg/dataquier"}, {"uid": "gitlab/uit-sfb/metapipe", "html_url": "https://rseng.github.io/software/repository/gitlab/uit-sfb/metapipe", "api_url": "https://rseng.github.io/software/api/repos/gitlab/uit-sfb/metapipe"}, {"uid": "gitlab/andrea-tango/ficos", "html_url": "https://rseng.github.io/software/repository/gitlab/andrea-tango/ficos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andrea-tango/ficos"}, {"uid": "gitlab/vda-lab/snowflake", "html_url": "https://rseng.github.io/software/repository/gitlab/vda-lab/snowflake", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vda-lab/snowflake"}, {"uid": "gitlab/eduardo-vitral/balrogo", "html_url": "https://rseng.github.io/software/repository/gitlab/eduardo-vitral/balrogo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eduardo-vitral/balrogo"}, {"uid": "gitlab/ags-data-format-wg/ags-python-library", "html_url": "https://rseng.github.io/software/repository/gitlab/ags-data-format-wg/ags-python-library", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ags-data-format-wg/ags-python-library"}, {"uid": "gitlab/aceteam.kaist/ACE-Molecule", "html_url": "https://rseng.github.io/software/repository/gitlab/aceteam.kaist/ACE-Molecule", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aceteam.kaist/ACE-Molecule"}, {"uid": "gitlab/ztzou/phydl", "html_url": "https://rseng.github.io/software/repository/gitlab/ztzou/phydl", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ztzou/phydl"}, {"uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", "html_url": "https://rseng.github.io/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", "api_url": "https://rseng.github.io/software/api/repos/gitlab/morikawa-lab-osakau/vibir-parallel-compute"}, {"uid": "gitlab/permafrostnet/teaspoon", "html_url": "https://rseng.github.io/software/repository/gitlab/permafrostnet/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/gitlab/permafrostnet/teaspoon"}, {"uid": "gitlab/eleonoraalei/exo-mercat-gui", "html_url": "https://rseng.github.io/software/repository/gitlab/eleonoraalei/exo-mercat-gui", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eleonoraalei/exo-mercat-gui"}, {"uid": "gitlab/gmamon/MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/gitlab/gmamon/MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gmamon/MAMPOSSt"}, {"uid": "gitlab/esa/pyxel", "html_url": "https://rseng.github.io/software/repository/gitlab/esa/pyxel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/esa/pyxel"}, {"uid": "gitlab/habermann_lab/phasik", "html_url": "https://rseng.github.io/software/repository/gitlab/habermann_lab/phasik", "api_url": "https://rseng.github.io/software/api/repos/gitlab/habermann_lab/phasik"}, {"uid": "gitlab/jtagusari/hrisk-noisemodelling", "html_url": "https://rseng.github.io/software/repository/gitlab/jtagusari/hrisk-noisemodelling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jtagusari/hrisk-noisemodelling"}, {"uid": "gitlab/ProjectRHEA/flowsolverrhea", "html_url": "https://rseng.github.io/software/repository/gitlab/ProjectRHEA/flowsolverrhea", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ProjectRHEA/flowsolverrhea"}, {"uid": "gitlab/LouisLab/PiVR", "html_url": "https://rseng.github.io/software/repository/gitlab/LouisLab/PiVR", "api_url": "https://rseng.github.io/software/api/repos/gitlab/LouisLab/PiVR"}, {"uid": "gitlab/qc-devs/aqcnes", "html_url": "https://rseng.github.io/software/repository/gitlab/qc-devs/aqcnes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/qc-devs/aqcnes"}, {"uid": "gitlab/programgreg/tagginglatencyestimator", "html_url": "https://rseng.github.io/software/repository/gitlab/programgreg/tagginglatencyestimator", "api_url": "https://rseng.github.io/software/api/repos/gitlab/programgreg/tagginglatencyestimator"}, {"uid": "gitlab/burstcube/mhealpy", "html_url": "https://rseng.github.io/software/repository/gitlab/burstcube/mhealpy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/burstcube/mhealpy"}, {"uid": "gitlab/EliseLei/easychem", "html_url": "https://rseng.github.io/software/repository/gitlab/EliseLei/easychem", "api_url": "https://rseng.github.io/software/api/repos/gitlab/EliseLei/easychem"}] +[{"uid": "gitlab/gims-developers/gims", "html_url": "https://rseng.github.io/software/repository/gitlab/gims-developers/gims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gims-developers/gims"}, {"uid": "gitlab/vibes-developers/vibes", "html_url": "https://rseng.github.io/software/repository/gitlab/vibes-developers/vibes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vibes-developers/vibes"}, {"uid": "gitlab/jerrytheo16/exoplanet", "html_url": "https://rseng.github.io/software/repository/gitlab/jerrytheo16/exoplanet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jerrytheo16/exoplanet"}, {"uid": "gitlab/programgreg/tagginglatencyestimator", "html_url": "https://rseng.github.io/software/repository/gitlab/programgreg/tagginglatencyestimator", "api_url": "https://rseng.github.io/software/api/repos/gitlab/programgreg/tagginglatencyestimator"}, {"uid": "gitlab/fduchate/predihood", "html_url": "https://rseng.github.io/software/repository/gitlab/fduchate/predihood", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fduchate/predihood"}, {"uid": "gitlab/pyFBS/pyFBS", "html_url": "https://rseng.github.io/software/repository/gitlab/pyFBS/pyFBS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pyFBS/pyFBS"}, {"uid": "gitlab/polmag/PORTA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/PORTA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/PORTA"}, {"uid": "gitlab/polmag/P-CORONA", "html_url": "https://rseng.github.io/software/repository/gitlab/polmag/P-CORONA", "api_url": "https://rseng.github.io/software/api/repos/gitlab/polmag/P-CORONA"}, {"uid": "gitlab/treangenlab/emu", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/emu"}, {"uid": "gitlab/treangenlab/vulcan", "html_url": "https://rseng.github.io/software/repository/gitlab/treangenlab/vulcan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/treangenlab/vulcan"}, {"uid": "gitlab/groimp-plugins/Pointcloud", "html_url": "https://rseng.github.io/software/repository/gitlab/groimp-plugins/Pointcloud", "api_url": "https://rseng.github.io/software/api/repos/gitlab/groimp-plugins/Pointcloud"}, {"uid": "gitlab/andrea-tango/ficos", "html_url": "https://rseng.github.io/software/repository/gitlab/andrea-tango/ficos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andrea-tango/ficos"}, {"uid": "gitlab/german.tischler/libmaus2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/libmaus2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/libmaus2"}, {"uid": "gitlab/german.tischler/biobambam2", "html_url": "https://rseng.github.io/software/repository/gitlab/german.tischler/biobambam2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/german.tischler/biobambam2"}, {"uid": "gitlab/remram44/taguette", "html_url": "https://rseng.github.io/software/repository/gitlab/remram44/taguette", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remram44/taguette"}, {"uid": "gitlab/moerman1/fhi-cc4s", "html_url": "https://rseng.github.io/software/repository/gitlab/moerman1/fhi-cc4s", "api_url": "https://rseng.github.io/software/api/repos/gitlab/moerman1/fhi-cc4s"}, {"uid": "gitlab/loic.cg.rossi/pymiedap", "html_url": "https://rseng.github.io/software/repository/gitlab/loic.cg.rossi/pymiedap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/loic.cg.rossi/pymiedap"}, {"uid": "gitlab/Molcas/OpenMolcas", "html_url": "https://rseng.github.io/software/repository/gitlab/Molcas/OpenMolcas", "api_url": "https://rseng.github.io/software/api/repos/gitlab/Molcas/OpenMolcas"}, {"uid": "gitlab/rki_bioinformatics/IDeFIX", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/IDeFIX", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/IDeFIX"}, {"uid": "gitlab/rki_bioinformatics/HiLive2", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/HiLive2", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/HiLive2"}, {"uid": "gitlab/rki_bioinformatics/purple", "html_url": "https://rseng.github.io/software/repository/gitlab/rki_bioinformatics/purple", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rki_bioinformatics/purple"}, {"uid": "gitlab/mauricemolli/petitRADTRANS", "html_url": "https://rseng.github.io/software/repository/gitlab/mauricemolli/petitRADTRANS", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mauricemolli/petitRADTRANS"}, {"uid": "gitlab/clairedavies/sedbys", "html_url": "https://rseng.github.io/software/repository/gitlab/clairedavies/sedbys", "api_url": "https://rseng.github.io/software/api/repos/gitlab/clairedavies/sedbys"}, {"uid": "gitlab/cosapp/cosapp", "html_url": "https://rseng.github.io/software/repository/gitlab/cosapp/cosapp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosapp/cosapp"}, {"uid": "gitlab/pipe3d/pyPipe3D", "html_url": "https://rseng.github.io/software/repository/gitlab/pipe3d/pyPipe3D", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pipe3d/pyPipe3D"}, {"uid": "gitlab/vincent-sater/umigen", "html_url": "https://rseng.github.io/software/repository/gitlab/vincent-sater/umigen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vincent-sater/umigen"}, {"uid": "gitlab/petsc/petsc", "html_url": "https://rseng.github.io/software/repository/gitlab/petsc/petsc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/petsc/petsc"}, {"uid": "gitlab/pythia-uq/pythia", "html_url": "https://rseng.github.io/software/repository/gitlab/pythia-uq/pythia", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pythia-uq/pythia"}, {"uid": "gitlab/davidwoodburn/r3f", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/r3f", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/r3f"}, {"uid": "gitlab/davidwoodburn/itrm", "html_url": "https://rseng.github.io/software/repository/gitlab/davidwoodburn/itrm", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidwoodburn/itrm"}, {"uid": "gitlab/gpagano/lensinggw", "html_url": "https://rseng.github.io/software/repository/gitlab/gpagano/lensinggw", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gpagano/lensinggw"}, {"uid": "gitlab/bu_cnio/vulcanspot", "html_url": "https://rseng.github.io/software/repository/gitlab/bu_cnio/vulcanspot", "api_url": "https://rseng.github.io/software/api/repos/gitlab/bu_cnio/vulcanspot"}, {"uid": "gitlab/ztzou/phydl", "html_url": "https://rseng.github.io/software/repository/gitlab/ztzou/phydl", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ztzou/phydl"}, {"uid": "gitlab/joseaher/astroplotlib", "html_url": "https://rseng.github.io/software/repository/gitlab/joseaher/astroplotlib", "api_url": "https://rseng.github.io/software/api/repos/gitlab/joseaher/astroplotlib"}, {"uid": "gitlab/uit-sfb/metapipe", "html_url": "https://rseng.github.io/software/repository/gitlab/uit-sfb/metapipe", "api_url": "https://rseng.github.io/software/api/repos/gitlab/uit-sfb/metapipe"}, {"uid": "gitlab/chrjan/seq-seq-pan", "html_url": "https://rseng.github.io/software/repository/gitlab/chrjan/seq-seq-pan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chrjan/seq-seq-pan"}, {"uid": "gitlab/qc-devs/aqcnes", "html_url": "https://rseng.github.io/software/repository/gitlab/qc-devs/aqcnes", "api_url": "https://rseng.github.io/software/api/repos/gitlab/qc-devs/aqcnes"}, {"uid": "gitlab/random-quintessence/random-quintessence", "html_url": "https://rseng.github.io/software/repository/gitlab/random-quintessence/random-quintessence", "api_url": "https://rseng.github.io/software/api/repos/gitlab/random-quintessence/random-quintessence"}, {"uid": "gitlab/chaver/choco-mining", "html_url": "https://rseng.github.io/software/repository/gitlab/chaver/choco-mining", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chaver/choco-mining"}, {"uid": "gitlab/cirad-apps/phylostems", "html_url": "https://rseng.github.io/software/repository/gitlab/cirad-apps/phylostems", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cirad-apps/phylostems"}, {"uid": "gitlab/cmbm-ethz/miop", "html_url": "https://rseng.github.io/software/repository/gitlab/cmbm-ethz/miop", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cmbm-ethz/miop"}, {"uid": "gitlab/djsmithbham/cnearest", "html_url": "https://rseng.github.io/software/repository/gitlab/djsmithbham/cnearest", "api_url": "https://rseng.github.io/software/api/repos/gitlab/djsmithbham/cnearest"}, {"uid": "gitlab/mule-tools/package-x", "html_url": "https://rseng.github.io/software/repository/gitlab/mule-tools/package-x", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mule-tools/package-x"}, {"uid": "gitlab/chjordan/sslf", "html_url": "https://rseng.github.io/software/repository/gitlab/chjordan/sslf", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chjordan/sslf"}, {"uid": "gitlab/pvst/asi", "html_url": "https://rseng.github.io/software/repository/gitlab/pvst/asi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/pvst/asi"}, {"uid": "gitlab/octopus-code/octopus", "html_url": "https://rseng.github.io/software/repository/gitlab/octopus-code/octopus", "api_url": "https://rseng.github.io/software/api/repos/gitlab/octopus-code/octopus"}, {"uid": "gitlab/rahmannlab/episegmix", "html_url": "https://rseng.github.io/software/repository/gitlab/rahmannlab/episegmix", "api_url": "https://rseng.github.io/software/api/repos/gitlab/rahmannlab/episegmix"}, {"uid": "gitlab/elsi_project/elsi_interface", "html_url": "https://rseng.github.io/software/repository/gitlab/elsi_project/elsi_interface", "api_url": "https://rseng.github.io/software/api/repos/gitlab/elsi_project/elsi_interface"}, {"uid": "gitlab/magnumpi/magnumpi", "html_url": "https://rseng.github.io/software/repository/gitlab/magnumpi/magnumpi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/magnumpi/magnumpi"}, {"uid": "gitlab/ezlab/busco", "html_url": "https://rseng.github.io/software/repository/gitlab/ezlab/busco", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ezlab/busco"}, {"uid": "gitlab/robizzard/libcdict", "html_url": "https://rseng.github.io/software/repository/gitlab/robizzard/libcdict", "api_url": "https://rseng.github.io/software/api/repos/gitlab/robizzard/libcdict"}, {"uid": "gitlab/micromorph/ratel", "html_url": "https://rseng.github.io/software/repository/gitlab/micromorph/ratel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/micromorph/ratel"}, {"uid": "gitlab/burstcube/mhealpy", "html_url": "https://rseng.github.io/software/repository/gitlab/burstcube/mhealpy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/burstcube/mhealpy"}, {"uid": "gitlab/EliseLei/easychem", "html_url": "https://rseng.github.io/software/repository/gitlab/EliseLei/easychem", "api_url": "https://rseng.github.io/software/api/repos/gitlab/EliseLei/easychem"}, {"uid": "gitlab/remikz/nccmp", "html_url": "https://rseng.github.io/software/repository/gitlab/remikz/nccmp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/remikz/nccmp"}, {"uid": "gitlab/gmamon/MAMPOSSt", "html_url": "https://rseng.github.io/software/repository/gitlab/gmamon/MAMPOSSt", "api_url": "https://rseng.github.io/software/api/repos/gitlab/gmamon/MAMPOSSt"}, {"uid": "gitlab/multigris/mgris", "html_url": "https://rseng.github.io/software/repository/gitlab/multigris/mgris", "api_url": "https://rseng.github.io/software/api/repos/gitlab/multigris/mgris"}, {"uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", "html_url": "https://rseng.github.io/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", "api_url": "https://rseng.github.io/software/api/repos/gitlab/morikawa-lab-osakau/vibir-parallel-compute"}, {"uid": "gitlab/davidtourigny/dynamic-fba", "html_url": "https://rseng.github.io/software/repository/gitlab/davidtourigny/dynamic-fba", "api_url": "https://rseng.github.io/software/api/repos/gitlab/davidtourigny/dynamic-fba"}, {"uid": "gitlab/jtagusari/hrisk-noisemodelling", "html_url": "https://rseng.github.io/software/repository/gitlab/jtagusari/hrisk-noisemodelling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jtagusari/hrisk-noisemodelling"}, {"uid": "gitlab/emd-dev/emd", "html_url": "https://rseng.github.io/software/repository/gitlab/emd-dev/emd", "api_url": "https://rseng.github.io/software/api/repos/gitlab/emd-dev/emd"}, {"uid": "gitlab/thartwig/asloth", "html_url": "https://rseng.github.io/software/repository/gitlab/thartwig/asloth", "api_url": "https://rseng.github.io/software/api/repos/gitlab/thartwig/asloth"}, {"uid": "gitlab/cosmology-ethz/ufig", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmology-ethz/ufig", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmology-ethz/ufig"}, {"uid": "gitlab/AstroVian/bmarxiv", "html_url": "https://rseng.github.io/software/repository/gitlab/AstroVian/bmarxiv", "api_url": "https://rseng.github.io/software/api/repos/gitlab/AstroVian/bmarxiv"}, {"uid": "gitlab/ENKI-portal/ThermoEngine", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoEngine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoEngine"}, {"uid": "gitlab/ENKI-portal/ThermoCodegen", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/ThermoCodegen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/ThermoCodegen"}, {"uid": "gitlab/ENKI-portal/vaporock", "html_url": "https://rseng.github.io/software/repository/gitlab/ENKI-portal/vaporock", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ENKI-portal/vaporock"}, {"uid": "gitlab/binary_c/binary_c-python", "html_url": "https://rseng.github.io/software/repository/gitlab/binary_c/binary_c-python", "api_url": "https://rseng.github.io/software/api/repos/gitlab/binary_c/binary_c-python"}, {"uid": "gitlab/LouisLab/PiVR", "html_url": "https://rseng.github.io/software/repository/gitlab/LouisLab/PiVR", "api_url": "https://rseng.github.io/software/api/repos/gitlab/LouisLab/PiVR"}, {"uid": "gitlab/ProjectRHEA/flowsolverrhea", "html_url": "https://rseng.github.io/software/repository/gitlab/ProjectRHEA/flowsolverrhea", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ProjectRHEA/flowsolverrhea"}, {"uid": "gitlab/metafundev/metafun", "html_url": "https://rseng.github.io/software/repository/gitlab/metafundev/metafun", "api_url": "https://rseng.github.io/software/api/repos/gitlab/metafundev/metafun"}, {"uid": "gitlab/sevecekp/sph", "html_url": "https://rseng.github.io/software/repository/gitlab/sevecekp/sph", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sevecekp/sph"}, {"uid": "gitlab/sissopp_developers/sissopp", "html_url": "https://rseng.github.io/software/repository/gitlab/sissopp_developers/sissopp", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sissopp_developers/sissopp"}, {"uid": "gitlab/imoralc/malu-ifs-visualization-tool", "html_url": "https://rseng.github.io/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", "api_url": "https://rseng.github.io/software/api/repos/gitlab/imoralc/malu-ifs-visualization-tool"}, {"uid": "gitlab/David_Haegele/line_racer", "html_url": "https://rseng.github.io/software/repository/gitlab/David_Haegele/line_racer", "api_url": "https://rseng.github.io/software/api/repos/gitlab/David_Haegele/line_racer"}, {"uid": "gitlab/dsbowen/conditional-inference", "html_url": "https://rseng.github.io/software/repository/gitlab/dsbowen/conditional-inference", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dsbowen/conditional-inference"}, {"uid": "gitlab/mainlabwsu/bims", "html_url": "https://rseng.github.io/software/repository/gitlab/mainlabwsu/bims", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mainlabwsu/bims"}, {"uid": "gitlab/open-darts/open-darts", "html_url": "https://rseng.github.io/software/repository/gitlab/open-darts/open-darts", "api_url": "https://rseng.github.io/software/api/repos/gitlab/open-darts/open-darts"}, {"uid": "gitlab/dalton/dalton", "html_url": "https://rseng.github.io/software/repository/gitlab/dalton/dalton", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dalton/dalton"}, {"uid": "gitlab/eleonoraalei/exo-mercat-gui", "html_url": "https://rseng.github.io/software/repository/gitlab/eleonoraalei/exo-mercat-gui", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eleonoraalei/exo-mercat-gui"}, {"uid": "gitlab/jason-rumengan/pyarma", "html_url": "https://rseng.github.io/software/repository/gitlab/jason-rumengan/pyarma", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jason-rumengan/pyarma"}, {"uid": "gitlab/ampere2/metalwalls", "html_url": "https://rseng.github.io/software/repository/gitlab/ampere2/metalwalls", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ampere2/metalwalls"}, {"uid": "gitlab/eduardo-vitral/balrogo", "html_url": "https://rseng.github.io/software/repository/gitlab/eduardo-vitral/balrogo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/eduardo-vitral/balrogo"}, {"uid": "gitlab/dglaeser/fieldcompare", "html_url": "https://rseng.github.io/software/repository/gitlab/dglaeser/fieldcompare", "api_url": "https://rseng.github.io/software/api/repos/gitlab/dglaeser/fieldcompare"}, {"uid": "gitlab/sigcorr/sigcorr", "html_url": "https://rseng.github.io/software/repository/gitlab/sigcorr/sigcorr", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sigcorr/sigcorr"}, {"uid": "gitlab/leelamichaels/Omega", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Omega", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Omega"}, {"uid": "gitlab/leelamichaels/Infinity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Infinity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Infinity"}, {"uid": "gitlab/leelamichaels/Elysium", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Elysium", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Elysium"}, {"uid": "gitlab/leelamichaels/Burning_Arrow", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Burning_Arrow", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Burning_Arrow"}, {"uid": "gitlab/leelamichaels/Tranquillity", "html_url": "https://rseng.github.io/software/repository/gitlab/leelamichaels/Tranquillity", "api_url": "https://rseng.github.io/software/api/repos/gitlab/leelamichaels/Tranquillity"}, {"uid": "gitlab/vda-lab/snowflake", "html_url": "https://rseng.github.io/software/repository/gitlab/vda-lab/snowflake", "api_url": "https://rseng.github.io/software/api/repos/gitlab/vda-lab/snowflake"}, {"uid": "gitlab/RKIBioinformaticsPipelines/QCumber", "html_url": "https://rseng.github.io/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", "api_url": "https://rseng.github.io/software/api/repos/gitlab/RKIBioinformaticsPipelines/QCumber"}, {"uid": "gitlab/astrogal/slideParam", "html_url": "https://rseng.github.io/software/repository/gitlab/astrogal/slideParam", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astrogal/slideParam"}, {"uid": "gitlab/astron-idg/idg", "html_url": "https://rseng.github.io/software/repository/gitlab/astron-idg/idg", "api_url": "https://rseng.github.io/software/api/repos/gitlab/astron-idg/idg"}, {"uid": "gitlab/picos-api/picos", "html_url": "https://rseng.github.io/software/repository/gitlab/picos-api/picos", "api_url": "https://rseng.github.io/software/api/repos/gitlab/picos-api/picos"}, {"uid": "gitlab/aroffringa/aoflagger", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/aoflagger", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/aoflagger"}, {"uid": "gitlab/aroffringa/wsclean", "html_url": "https://rseng.github.io/software/repository/gitlab/aroffringa/wsclean", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aroffringa/wsclean"}, {"uid": "gitlab/cracklet/cracklet", "html_url": "https://rseng.github.io/software/repository/gitlab/cracklet/cracklet", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cracklet/cracklet"}, {"uid": "gitlab/JuditGG/trumpetplots", "html_url": "https://rseng.github.io/software/repository/gitlab/JuditGG/trumpetplots", "api_url": "https://rseng.github.io/software/api/repos/gitlab/JuditGG/trumpetplots"}, {"uid": "gitlab/fibreglass/pivc", "html_url": "https://rseng.github.io/software/repository/gitlab/fibreglass/pivc", "api_url": "https://rseng.github.io/software/api/repos/gitlab/fibreglass/pivc"}, {"uid": "gitlab/permafrostnet/teaspoon", "html_url": "https://rseng.github.io/software/repository/gitlab/permafrostnet/teaspoon", "api_url": "https://rseng.github.io/software/api/repos/gitlab/permafrostnet/teaspoon"}, {"uid": "gitlab/ags-data-format-wg/ags-python-library", "html_url": "https://rseng.github.io/software/repository/gitlab/ags-data-format-wg/ags-python-library", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ags-data-format-wg/ags-python-library"}, {"uid": "gitlab/paulklemm_PHD/proteinortho", "html_url": "https://rseng.github.io/software/repository/gitlab/paulklemm_PHD/proteinortho", "api_url": "https://rseng.github.io/software/api/repos/gitlab/paulklemm_PHD/proteinortho"}, {"uid": "gitlab/sybreton/apollinaire", "html_url": "https://rseng.github.io/software/repository/gitlab/sybreton/apollinaire", "api_url": "https://rseng.github.io/software/api/repos/gitlab/sybreton/apollinaire"}, {"uid": "gitlab/souvlaki/thalassa", "html_url": "https://rseng.github.io/software/repository/gitlab/souvlaki/thalassa", "api_url": "https://rseng.github.io/software/api/repos/gitlab/souvlaki/thalassa"}, {"uid": "gitlab/mbiagetti/persistent_homology_lss", "html_url": "https://rseng.github.io/software/repository/gitlab/mbiagetti/persistent_homology_lss", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mbiagetti/persistent_homology_lss"}, {"uid": "gitlab/geekysquirrel/bigx", "html_url": "https://rseng.github.io/software/repository/gitlab/geekysquirrel/bigx", "api_url": "https://rseng.github.io/software/api/repos/gitlab/geekysquirrel/bigx"}, {"uid": "gitlab/mobse/source-code", "html_url": "https://rseng.github.io/software/repository/gitlab/mobse/source-code", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mobse/source-code"}, {"uid": "gitlab/wpettersson/kep_solver", "html_url": "https://rseng.github.io/software/repository/gitlab/wpettersson/kep_solver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/wpettersson/kep_solver"}, {"uid": "gitlab/mcfuman/SpectraPy", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfuman/SpectraPy", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfuman/SpectraPy"}, {"uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", "html_url": "https://rseng.github.io/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", "api_url": "https://rseng.github.io/software/api/repos/gitlab/MartinBeseda/sa-oo-vqe-qiskit"}, {"uid": "gitlab/mcfrith/tantan", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/tantan", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/tantan"}, {"uid": "gitlab/mcfrith/paraclu", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/paraclu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/paraclu"}, {"uid": "gitlab/mcfrith/last", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/last", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/last"}, {"uid": "gitlab/mcfrith/lamassemble", "html_url": "https://rseng.github.io/software/repository/gitlab/mcfrith/lamassemble", "api_url": "https://rseng.github.io/software/api/repos/gitlab/mcfrith/lamassemble"}, {"uid": "gitlab/jesseds/apav", "html_url": "https://rseng.github.io/software/repository/gitlab/jesseds/apav", "api_url": "https://rseng.github.io/software/api/repos/gitlab/jesseds/apav"}, {"uid": "gitlab/BioimageInformaticsGroup/openphi", "html_url": "https://rseng.github.io/software/repository/gitlab/BioimageInformaticsGroup/openphi", "api_url": "https://rseng.github.io/software/api/repos/gitlab/BioimageInformaticsGroup/openphi"}, {"uid": "gitlab/ComputationalScience/idinn", "html_url": "https://rseng.github.io/software/repository/gitlab/ComputationalScience/idinn", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ComputationalScience/idinn"}, {"uid": "gitlab/ChemBioHub/tpmap", "html_url": "https://rseng.github.io/software/repository/gitlab/ChemBioHub/tpmap", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ChemBioHub/tpmap"}, {"uid": "gitlab/libreumg/dataquier", "html_url": "https://rseng.github.io/software/repository/gitlab/libreumg/dataquier", "api_url": "https://rseng.github.io/software/api/repos/gitlab/libreumg/dataquier"}, {"uid": "gitlab/aegge/comet-emu", "html_url": "https://rseng.github.io/software/repository/gitlab/aegge/comet-emu", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aegge/comet-emu"}, {"uid": "gitlab/andresruiz/Sparkling", "html_url": "https://rseng.github.io/software/repository/gitlab/andresruiz/Sparkling", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andresruiz/Sparkling"}, {"uid": "gitlab/materials-modeling/calorine", "html_url": "https://rseng.github.io/software/repository/gitlab/materials-modeling/calorine", "api_url": "https://rseng.github.io/software/api/repos/gitlab/materials-modeling/calorine"}, {"uid": "gitlab/andreas.andrusch/paipline", "html_url": "https://rseng.github.io/software/repository/gitlab/andreas.andrusch/paipline", "api_url": "https://rseng.github.io/software/api/repos/gitlab/andreas.andrusch/paipline"}, {"uid": "gitlab/etienne.behar/menura", "html_url": "https://rseng.github.io/software/repository/gitlab/etienne.behar/menura", "api_url": "https://rseng.github.io/software/api/repos/gitlab/etienne.behar/menura"}, {"uid": "gitlab/InspectorCell/inspectorcell", "html_url": "https://rseng.github.io/software/repository/gitlab/InspectorCell/inspectorcell", "api_url": "https://rseng.github.io/software/api/repos/gitlab/InspectorCell/inspectorcell"}, {"uid": "gitlab/ostrokach/proteinsolver", "html_url": "https://rseng.github.io/software/repository/gitlab/ostrokach/proteinsolver", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ostrokach/proteinsolver"}, {"uid": "gitlab/ffaucher/hawen", "html_url": "https://rseng.github.io/software/repository/gitlab/ffaucher/hawen", "api_url": "https://rseng.github.io/software/api/repos/gitlab/ffaucher/hawen"}, {"uid": "gitlab/casi-project/casi-2d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-2d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-2d"}, {"uid": "gitlab/casi-project/casi-3d", "html_url": "https://rseng.github.io/software/repository/gitlab/casi-project/casi-3d", "api_url": "https://rseng.github.io/software/api/repos/gitlab/casi-project/casi-3d"}, {"uid": "gitlab/medbio/disgenet2r", "html_url": "https://rseng.github.io/software/repository/gitlab/medbio/disgenet2r", "api_url": "https://rseng.github.io/software/api/repos/gitlab/medbio/disgenet2r"}, {"uid": "gitlab/project-dare/dare-platform", "html_url": "https://rseng.github.io/software/repository/gitlab/project-dare/dare-platform", "api_url": "https://rseng.github.io/software/api/repos/gitlab/project-dare/dare-platform"}, {"uid": "gitlab/cosmograil/starred", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/starred", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/starred"}, {"uid": "gitlab/cosmograil/PyCS3", "html_url": "https://rseng.github.io/software/repository/gitlab/cosmograil/PyCS3", "api_url": "https://rseng.github.io/software/api/repos/gitlab/cosmograil/PyCS3"}, {"uid": "gitlab/chiemotono/mdcontactcom", "html_url": "https://rseng.github.io/software/repository/gitlab/chiemotono/mdcontactcom", "api_url": "https://rseng.github.io/software/api/repos/gitlab/chiemotono/mdcontactcom"}, {"uid": "gitlab/esa/pyxel", "html_url": "https://rseng.github.io/software/repository/gitlab/esa/pyxel", "api_url": "https://rseng.github.io/software/api/repos/gitlab/esa/pyxel"}, {"uid": "gitlab/habermann_lab/phasik", "html_url": "https://rseng.github.io/software/repository/gitlab/habermann_lab/phasik", "api_url": "https://rseng.github.io/software/api/repos/gitlab/habermann_lab/phasik"}, {"uid": "gitlab/kmrajwade/iqrm_apollo", "html_url": "https://rseng.github.io/software/repository/gitlab/kmrajwade/iqrm_apollo", "api_url": "https://rseng.github.io/software/api/repos/gitlab/kmrajwade/iqrm_apollo"}, {"uid": "gitlab/aceteam.kaist/ACE-Molecule", "html_url": "https://rseng.github.io/software/repository/gitlab/aceteam.kaist/ACE-Molecule", "api_url": "https://rseng.github.io/software/api/repos/gitlab/aceteam.kaist/ACE-Molecule"}] diff --git a/docs/data.json b/docs/data.json index 3210fef1d..b8409b439 100644 --- a/docs/data.json +++ b/docs/data.json @@ -1,2864 +1,2934 @@ [ { - "uid": "gitlab/cirad-apps/phylostems", - "url": "https://gitlab.com/cirad-apps/phylostems", - "rel": "/software/repository/gitlab/cirad-apps/phylostems", - "avatar": "https://gitlab.comNone", - "description": "**phylostems** is a graphical tool developped by CIRAD (UMR PVBMT) to explore temporal signal at various evolutionary scales in heterochronous nucleic acid sequences datasets.", - "topics": [] + "uid": "github/fairdataihub/SPARClink", + "url": "https://github.com/fairdataihub/SPARClink", + "rel": "/software/repository/github/fairdataihub/SPARClink", + "avatar": "https://avatars.githubusercontent.com/u/90935916?v=4", + "description": "SPARClink: Visualizing the Impact of SPARC", + "topics": [ + "visualization", + "nlp", + "machine-learning", + "hackathon", + "citations", + "topic-modeling", + "fair", + "d3js", + "keyword-extraction", + "python" + ] }, { - "uid": "gitlab/mcfuman/SpectraPy", - "url": "https://gitlab.com/mcfuman/SpectraPy", - "rel": "/software/repository/gitlab/mcfuman/SpectraPy", - "avatar": "https://gitlab.comNone", - "description": "Python module to extract and reduce astronomical spectral data", + "uid": "github/nansencenter/DAPPER", + "url": "https://github.com/nansencenter/DAPPER", + "rel": "/software/repository/github/nansencenter/DAPPER", + "avatar": "https://avatars.githubusercontent.com/u/5212513?v=4", + "description": "Data Assimilation with Python: a Package for Experimental Research", + "topics": [ + "data-assimilation", + "enkf", + "kalman-filtering", + "state-estimation", + "particle-filter", + "kalman", + "bayesian-methods", + "bayesian-filter", + "chaos" + ] + }, + { + "uid": "github/jorittmo/singcar", + "url": "https://github.com/jorittmo/singcar", + "rel": "/software/repository/github/jorittmo/singcar", + "avatar": "https://avatars.githubusercontent.com/u/62261432?v=4", + "description": "singcar: A package for analysing case comparisons to normative controls", "topics": [] }, { - "uid": "gitlab/sissopp_developers/sissopp", - "url": "https://gitlab.com/sissopp_developers/sissopp", - "rel": "/software/repository/gitlab/sissopp_developers/sissopp", - "avatar": "https://gitlab.comNone", - "description": "C++ implementation of sisso.", + "uid": "github/oxpig/ImmuneBuilder", + "url": "https://github.com/oxpig/ImmuneBuilder", + "rel": "/software/repository/github/oxpig/ImmuneBuilder", + "avatar": "https://avatars.githubusercontent.com/u/43843505?v=4", + "description": "Predict the structure of immune receptor proteins", "topics": [] }, { - "uid": "gitlab/dglaeser/fieldcompare", - "url": "https://gitlab.com/dglaeser/fieldcompare", - "rel": "/software/repository/gitlab/dglaeser/fieldcompare", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/32838547/fcompare_logo.png", - "description": "Python package with command-line interface to compare field data", + "uid": "github/sjforeman/bskit", + "url": "https://github.com/sjforeman/bskit", + "rel": "/software/repository/github/sjforeman/bskit", + "avatar": "https://avatars.githubusercontent.com/u/14794540?v=4", + "description": "Code for measuring bispectra from cosmological simulation snapshots", "topics": [] }, { - "uid": "gitlab/chiemotono/mdcontactcom", - "url": "https://gitlab.com/chiemotono/mdcontactcom", - "rel": "/software/repository/gitlab/chiemotono/mdcontactcom", - "avatar": "https://gitlab.comNone", - "description": "", + "uid": "github/sjforeman/StringFast", + "url": "https://github.com/sjforeman/StringFast", + "rel": "/software/repository/github/sjforeman/StringFast", + "avatar": "https://avatars.githubusercontent.com/u/14794540?v=4", + "description": "A fast code to compute CMB power spectra induced by a network of cosmic strings", "topics": [] }, { - "uid": "gitlab/andreas.andrusch/paipline", - "url": "https://gitlab.com/andreas.andrusch/paipline", - "rel": "/software/repository/gitlab/andreas.andrusch/paipline", - "avatar": "https://gitlab.comNone", - "description": "Pipeline for the Automatic Identification of Pathogens", + "uid": "github/alexander-mead/HMcode", + "url": "https://github.com/alexander-mead/HMcode", + "rel": "/software/repository/github/alexander-mead/HMcode", + "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", + "description": "Augmented halo model for accurate non-linear matter power spectrum calculations", + "topics": [ + "astrophysics", + "cosmology", + "astronomy" + ] + }, + { + "uid": "github/alexander-mead/collapse", + "url": "https://github.com/alexander-mead/collapse", + "rel": "/software/repository/github/alexander-mead/collapse", + "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", + "description": "Spherical-collapse model code", "topics": [] }, { - "uid": "gitlab/paulklemm_PHD/proteinortho", - "url": "https://gitlab.com/paulklemm_PHD/proteinortho", - "rel": "/software/repository/gitlab/paulklemm_PHD/proteinortho", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7278443/icon4.png", - "description": "Proteinortho is a tool to detect orthologous genes within different species. [(Download)](https://gitlab.com/paulklemm_PHD/proteinortho/-/archive/master/proteinortho-master.tar.gz)", + "uid": "github/alexander-mead/pyhalomodel", + "url": "https://github.com/alexander-mead/pyhalomodel", + "rel": "/software/repository/github/alexander-mead/pyhalomodel", + "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", + "description": "A pure Python halo-model implementation for power spectra of any large-scale structure tracer combination.", "topics": [ - "bioinformatics", - "orthology", - "orthology inference" + "astrophysics", + "cosmology", + "large-scale-structure" ] }, { - "uid": "gitlab/rahmannlab/episegmix", - "url": "https://gitlab.com/rahmannlab/episegmix", - "rel": "/software/repository/gitlab/rahmannlab/episegmix", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/range-et/PGL", + "url": "https://github.com/range-et/PGL", + "rel": "/software/repository/github/range-et/PGL", + "avatar": "https://avatars.githubusercontent.com/u/64481693?v=4", + "description": "The Plebeian Graph Library: A WebGL based network visusalisation and diagnostics package", + "topics": [ + "data-visualization", + "graph", + "graph-theory", + "visualization", + "webgl" + ] + }, + { + "uid": "github/JixingGE/GGCHEMPY", + "url": "https://github.com/JixingGE/GGCHEMPY", + "rel": "/software/repository/github/JixingGE/GGCHEMPY", + "avatar": "https://avatars.githubusercontent.com/u/49381977?v=4", + "description": "Gas-grain chemical code for interstellar medium in pure Python", "topics": [] }, { - "uid": "gitlab/cmbm-ethz/miop", - "url": "https://gitlab.com/miop-project/miop", - "rel": "/software/repository/gitlab/cmbm-ethz/miop", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/68557472/po.png", - "description": "A modular pipeline for 3D reconstruction from SEM images", + "uid": "github/andreyshabalin/TwinEQTL", + "url": "https://github.com/andreyshabalin/TwinEQTL", + "rel": "/software/repository/github/andreyshabalin/TwinEQTL", + "avatar": "https://avatars.githubusercontent.com/u/17608988?v=4", + "description": "TwinMeta: Fast and Powerful Association Analysis for eQTL and GWAS in Twin Studies", "topics": [] }, { - "uid": "gitlab/chaver/choco-mining", - "url": "https://gitlab.com/chaver/choco-mining", - "rel": "/software/repository/gitlab/chaver/choco-mining", - "avatar": "https://gitlab.comNone", - "description": "Data mining with Choco solver", + "uid": "github/myrafproject/myrafproject", + "url": "https://github.com/myrafproject/myrafproject", + "rel": "/software/repository/github/myrafproject/myrafproject", + "avatar": "https://avatars.githubusercontent.com/u/11473972?v=4", + "description": "An Easy GUI for IRAF Photometry: MYRaf Project 3.0! ", "topics": [ - "Association Rules Mining", - "Choco solver", - "Constraint Programming", - "Pareto", - "Skypattern", - "data mining", - "pattern mining" + "astronomy", + "photometry", + "photometry-pipeline" ] }, { - "uid": "gitlab/remikz/nccmp", - "url": "https://gitlab.com/remikz/nccmp", - "rel": "/software/repository/gitlab/remikz/nccmp", - "avatar": "https://gitlab.comNone", - "description": "nccmp - Compare 2 NetCDF files. ", + "uid": "github/mneeleman/qubefit", + "url": "https://github.com/mneeleman/qubefit", + "rel": "/software/repository/github/mneeleman/qubefit", + "avatar": "https://avatars.githubusercontent.com/u/10130842?v=4", + "description": null, "topics": [] }, { - "uid": "gitlab/moerman1/fhi-cc4s", - "url": "https://gitlab.com/moerman1/fhi-cc4s", - "rel": "/software/repository/gitlab/moerman1/fhi-cc4s", - "avatar": "https://gitlab.comNone", - "description": "This project constitutes the interface between the Fritz Haber Institute ab initio molecular simulations (FHI-aims) and the Coupled Cluster for Solids (CC4S) code developed by Felix Hummel and Adreas Grueneis at the TU Wien. \r\n", - "topics": [] + "uid": "github/Hoohm/CITE-seq-Count", + "url": "https://github.com/Hoohm/CITE-seq-Count", + "rel": "/software/repository/github/Hoohm/CITE-seq-Count", + "avatar": "https://avatars.githubusercontent.com/u/1267560?v=4", + "description": "A tool that allows to get UMI counts from a single cell protein assay", + "topics": [ + "single-cell", + "citeseq", + "10x", + "dropseq" + ] }, { - "uid": "gitlab/pvst/asi", - "url": "https://gitlab.com/pvst/asi", - "rel": "/software/repository/gitlab/pvst/asi", - "avatar": "https://gitlab.comNone", - "description": "Atomic Simulations Interface", + "uid": "github/mlhutchins/LWPC", + "url": "https://github.com/mlhutchins/LWPC", + "rel": "/software/repository/github/mlhutchins/LWPC", + "avatar": "https://avatars.githubusercontent.com/u/5377015?v=4", + "description": "Version 2.1 of the U.S. Navy Long Wave Propagation Capability code with alterations for running as a MATLAB function. The altered version has most warning and error reporting removed.", "topics": [] }, { - "uid": "gitlab/souvlaki/thalassa", - "url": "https://gitlab.com/souvlaki/thalassa", - "rel": "/software/repository/gitlab/souvlaki/thalassa", - "avatar": "https://gitlab.comNone", + "uid": "github/kjschmidlab/GGoutlieR", + "url": "https://github.com/kjschmidlab/GGoutlieR", + "rel": "/software/repository/github/kjschmidlab/GGoutlieR", + "avatar": "https://avatars.githubusercontent.com/u/131003993?v=4", "description": null, "topics": [] }, { - "uid": "gitlab/JuditGG/trumpetplots", - "url": "https://gitlab.com/JuditGG/trumpetplots", - "rel": "/software/repository/gitlab/JuditGG/trumpetplots", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/45249770/trumpet-icon-design-free-vector.jpg", - "description": "Rpackage for Trumpet plots", + "uid": "github/akikuno/cstag", + "url": "https://github.com/akikuno/cstag", + "rel": "/software/repository/github/akikuno/cstag", + "avatar": "https://avatars.githubusercontent.com/u/15861316?v=4", + "description": "Python module to manipulate and visualize minimap2's cs tag", "topics": [ - "genetics", - "gwas", - "visualization" + "bioinformatics", + "python", + "sequence", + "minimap2", + "sam", + "cstag" ] }, { - "uid": "gitlab/jerrytheo16/exoplanet", - "url": "https://gitlab.com/jerrytheo16/exoplanet", - "rel": "/software/repository/gitlab/jerrytheo16/exoplanet", - "avatar": "https://gitlab.comNone", - "description": "Desktop-based application to aid in constructing a machine learning model for predictive analysis. The application further allows the model to be evaluated through statistical results and interactive graphs.", + "uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", + "url": "https://github.com/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", + "rel": "/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", + "avatar": "https://avatars.githubusercontent.com/u/108754960?v=4", + "description": "CNH Pediatric Brain Tumor Segmenter", "topics": [] }, { - "uid": "gitlab/treangenlab/vulcan", - "url": "https://gitlab.com/treangenlab/vulcan", - "rel": "/software/repository/gitlab/treangenlab/vulcan", - "avatar": "https://gitlab.comNone", - "description": "", + "uid": "github/cpinte/casa_cube", + "url": "https://github.com/cpinte/casa_cube", + "rel": "/software/repository/github/cpinte/casa_cube", + "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", + "description": "python tool to display and analysis astronomical data cubes", "topics": [] }, { - "uid": "gitlab/treangenlab/emu", - "url": "https://gitlab.com/treangenlab/emu", - "rel": "/software/repository/gitlab/treangenlab/emu", - "avatar": "https://gitlab.com/treangenlab/emu/-/avatar", - "description": "EMu is a relative abundance estimator for 16S genomic sequences", - "topics": [] + "uid": "github/cpinte/mcfost", + "url": "https://github.com/cpinte/mcfost", + "rel": "/software/repository/github/cpinte/mcfost", + "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", + "description": "MCFOST radiative transfer code", + "topics": [ + "astronomy", + "astrophysics", + "astrophysical-simulation", + "radiative-transfer", + "fortran" + ] }, { - "uid": "gitlab/project-dare/dare-platform", - "url": "https://gitlab.com/project-dare/dare-platform", - "rel": "/software/repository/gitlab/project-dare/dare-platform", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/14873006/dare.png", - "description": "", + "uid": "github/cpinte/pymcfost", + "url": "https://github.com/cpinte/pymcfost", + "rel": "/software/repository/github/cpinte/pymcfost", + "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", + "description": "python interface to the 3D radiative transfer code mcfost", "topics": [] }, { - "uid": "gitlab/clairedavies/sedbys", - "url": "https://gitlab.com/clairedavies/sedbys", - "rel": "/software/repository/gitlab/clairedavies/sedbys", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/19428398/sedbys_logo.jpg", - "description": "A python-based spectral energy distribution builder for young stars", + "uid": "github/MegaMorph/galapagos-c", + "url": "https://github.com/MegaMorph/galapagos-c", + "rel": "/software/repository/github/MegaMorph/galapagos-c", + "avatar": "https://avatars.githubusercontent.com/u/6997950?v=4", + "description": "Andreas Hiemer's re-implementation and extension of GALAPAGOS in C", "topics": [] }, { - "uid": "gitlab/gims-developers/gims", - "url": "https://gitlab.com/gims-developers/gims", - "rel": "/software/repository/gitlab/gims-developers/gims", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/16358286/GIMSLogo.png", - "description": "GIMS -- Graphical Interface for Materials Simulations -- is an open-source, browser-based toolbox for electronic structure codes. Try it here: [gims.ms1p.org](https://gims.ms1p.org)", + "uid": "github/shihyuntang/igrins_rv", + "url": "https://github.com/shihyuntang/igrins_rv", + "rel": "/software/repository/github/shihyuntang/igrins_rv", + "avatar": "https://avatars.githubusercontent.com/u/26864783?v=4", + "description": "Welcome to IGRINS RV, a open source pipeline for extracting radial velocity (RV) for the Immersion GRating INfrared Spectrometer (IGRINS) instrument. Please contact asa.stahl@rice.edu or sytang@lowell.edu for more detail.", "topics": [] }, { - "uid": "gitlab/astron-idg/idg", - "url": "https://gitlab.com/astron-idg/idg", - "rel": "/software/repository/gitlab/astron-idg/idg", - "avatar": "https://gitlab.comNone", - "description": "Mirror of git.astron.nl/rd/idg", + "uid": "github/Arpitk1001/RotCurveTool", + "url": "https://github.com/Arpitk1001/RotCurveTool", + "rel": "/software/repository/github/Arpitk1001/RotCurveTool", + "avatar": "https://avatars.githubusercontent.com/u/212198082?v=4", + "description": "A streamlined Python-based tool for simulating and fitting galactic rotation curves using modular mass models and statistical inference.", "topics": [] }, { - "uid": "gitlab/jesseds/apav", - "url": "https://gitlab.com/jesseds/apav", - "rel": "/software/repository/gitlab/jesseds/apav", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/10414782/g39334.png", - "description": "APAV (Atom Probe Analysis and Visualization) is a Python library for the analysis and\r\nvisualization of atom probe tomography experiments.", + "uid": "github/torognes/vsearch", + "url": "https://github.com/torognes/vsearch", + "rel": "/software/repository/github/torognes/vsearch", + "avatar": "https://avatars.githubusercontent.com/u/2765754?v=4", + "description": "Versatile open-source tool for microbiome analysis", "topics": [ - "Atom Probe", - "Field Evaporation", - "data analysis", - "science", - "tomography" + "metabarcoding", + "metagenomics", + "chimera", + "bioinformatics", + "fastq", + "fasta", + "microbiome", + "amplicon", + "sequence-alignment", + "clustering", + "search" ] }, { - "uid": "gitlab/pipe3d/pyPipe3D", - "url": "https://gitlab.com/pipe3d/pyPipe3D", - "rel": "/software/repository/gitlab/pipe3d/pyPipe3D", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/26080505/pyPipe3D_colorido_avatar.png", - "description": "pyPipe3D is a spectroscopy analysis pipeline which produces coherent, easy to distribute and compare, parameters of the stellar populations and the ionized gas, suited in particular for data from the most recent optical IFS surveys.", + "uid": "github/torognes/swarm", + "url": "https://github.com/torognes/swarm", + "rel": "/software/repository/github/torognes/swarm", + "avatar": "https://avatars.githubusercontent.com/u/2765754?v=4", + "description": "A robust and fast clustering method for amplicon-based studies", "topics": [ - "ifs", - "ionized gas", - "ism", - "spectroscopy", - "stellar population synthesis", - "techniques" + "metabarcoding", + "clustering", + "bioinformatics", + "microbiome", + "sequence", + "fasta" ] }, { - "uid": "gitlab/geekysquirrel/bigx", - "url": "https://gitlab.com/geekysquirrel/bigx", - "rel": "/software/repository/gitlab/geekysquirrel/bigx", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/10925765/bigx.png", - "description": "A data visualisation tool for geographic datasets", - "topics": [] - }, - { - "uid": "gitlab/binary_c/binary_c-python", - "url": "https://gitlab.com/binary_c/binary_c-python", - "rel": "/software/repository/gitlab/binary_c/binary_c-python", - "avatar": "https://gitlab.comNone", - "description": "Python module to interface with the binary_c stellar population framework.\r\n\r\nThe current stable branch is 1.0.0 which you can find in the [releases/1.0.0/2.2.4 branch](https://gitlab.com/binary_c/binary_c-python/-/tree/releases/1.0.0/2.2.4) which works with [binary_c version 2.2.4](https://gitlab.com/binary_c/binary_c/-/tree/development/2.2.4)", + "uid": "github/kavir1698/EvoDynamics.jl", + "url": "https://github.com/kavir1698/EvoDynamics.jl", + "rel": "/software/repository/github/kavir1698/EvoDynamics.jl", + "avatar": "https://avatars.githubusercontent.com/u/3798865?v=4", + "description": "Simulation of eco-evolutionary dynamics on multi-trait networks", "topics": [] }, { - "uid": "gitlab/jason-rumengan/pyarma", - "url": "https://gitlab.com/jason-rumengan/pyarma", - "rel": "/software/repository/gitlab/jason-rumengan/pyarma", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/22728285/pyarma_logo1.png", - "description": "PyArmadillo - linear algebra library for Python with MATLAB-like syntax - https://pyarma.sourceforge.io", + "uid": "github/mc-imperial/jfs", + "url": "https://github.com/mc-imperial/jfs", + "rel": "/software/repository/github/mc-imperial/jfs", + "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", + "description": "Constraint solver based on coverage-guided fuzzing", "topics": [ - "BLAS", - "C++", - "LAPACK", - "Linear Algebra", - "MATLAB", - "Python", - "Scientifc Computing" + "floating-point-arithmetic", + "constraint-solver", + "smtlibv2", + "smtlib", + "fuzzing", + "llvm", + "libfuzzer", + "z3", + "jit", + "coverage-guided-fuzzing" ] }, { - "uid": "gitlab/aroffringa/wsclean", - "url": "https://gitlab.com/aroffringa/wsclean", - "rel": "/software/repository/gitlab/aroffringa/wsclean", - "avatar": "https://gitlab.comNone", - "description": "WSClean (w-stacking clean) is a fast generic widefield imager. It implements several gridding algorithms and offers fully-automated multi-scale multi-frequency deconvolution. Manual: https://wsclean.readthedocs.io/", + "uid": "github/mc-imperial/multicore-test-harness", + "url": "https://github.com/mc-imperial/multicore-test-harness", + "rel": "/software/repository/github/mc-imperial/multicore-test-harness", + "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", + "description": "A multicore microprocessor test harness for measuring interference", "topics": [] }, { - "uid": "gitlab/aroffringa/aoflagger", - "url": "https://gitlab.com/aroffringa/aoflagger", - "rel": "/software/repository/gitlab/aroffringa/aoflagger", - "avatar": "https://gitlab.comNone", - "description": "The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. It can make use of Lua scripts to make flagging strategies flexible, and the tools are applicable to a wide set of telescopes.", + "uid": "github/mc-imperial/gpuverify", + "url": "https://github.com/mc-imperial/gpuverify", + "rel": "/software/repository/github/mc-imperial/gpuverify", + "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", + "description": "GPUVerify: a Verifier for GPU Kernels", "topics": [] }, { - "uid": "gitlab/open-darts/open-darts", - "url": "https://gitlab.com/open-darts/open-darts", - "rel": "/software/repository/gitlab/open-darts/open-darts", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/43477574/logo.png", - "description": "The DARTS framework is designed for forward and inverse modeling in geo-energy applications.", + "uid": "github/DSIMB/medusa", + "url": "https://github.com/DSIMB/MEDUSA", + "rel": "/software/repository/github/DSIMB/medusa", + "avatar": "https://avatars.githubusercontent.com/u/76147763?v=4", + "description": "A Deep Learning based protein flexibility prediction tool.", "topics": [ - "energy transition", - "geothermal energy production", - "modeling of CO2 sequestration" + "protein", + "flexibility", + "protein-sequence", + "prediction", + "deep-learning" ] }, { - "uid": "gitlab/ffaucher/hawen", - "url": "https://gitlab.com/ffaucher/hawen", - "rel": "/software/repository/gitlab/ffaucher/hawen", - "avatar": "https://gitlab.comNone", - "description": "time-HArmonic Wave modEling and INversion using Hybridizable Discontinuous Galerkin Discretization (hawen). The code is written in Fortran90, for forward and inverse time-harmonic wave problems. It uses mpi and openmp parallelism.", + "uid": "github/santeripuranen/SpydrPick", + "url": "https://github.com/santeripuranen/SpydrPick", + "rel": "/software/repository/github/santeripuranen/SpydrPick", + "avatar": "https://avatars.githubusercontent.com/u/26481940?v=4", + "description": "SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.", "topics": [] }, { - "uid": "gitlab/groimp-plugins/Pointcloud", - "url": "https://gitlab.com/groimp-plugins/pointcloud", - "rel": "/software/repository/gitlab/groimp-plugins/Pointcloud", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/wesleyburr/subMaldi", + "url": "https://github.com/wesleyburr/subMaldi", + "rel": "/software/repository/github/wesleyburr/subMaldi", + "avatar": "https://avatars.githubusercontent.com/u/882471?v=4", + "description": "subMaldi: a package for R", "topics": [] }, { - "uid": "gitlab/casi-project/casi-2d", - "url": "https://gitlab.com/casi-project/casi-2d", - "rel": "/software/repository/gitlab/casi-project/casi-2d", - "avatar": "https://gitlab.comNone", - "description": "Identification of stellar feedback signatures in simulated molecular clouds using methods from deep learning.", + "uid": "github/michaelhb/superplot", + "url": "https://github.com/michaelhb/superplot", + "rel": "/software/repository/github/michaelhb/superplot", + "avatar": "https://avatars.githubusercontent.com/u/7548044?v=4", + "description": "GUI for making high-quality plots from data from MultiNest or BAYES-X", "topics": [] }, { - "uid": "gitlab/casi-project/casi-3d", - "url": "https://gitlab.com/casi-project/casi-3d", - "rel": "/software/repository/gitlab/casi-project/casi-3d", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/MADHATdm/MADHAT", + "url": "https://github.com/MADHATdm/MADHAT", + "rel": "/software/repository/github/MADHATdm/MADHAT", + "avatar": "https://avatars.githubusercontent.com/u/55260798?v=4", + "description": "Model-Agnostic Dark Halo Analysis Tool", "topics": [] }, { - "uid": "gitlab/aegge/comet-emu", - "url": "https://gitlab.com/aegge/comet-emu", - "rel": "/software/repository/gitlab/aegge/comet-emu", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/orcasgit/python-fitbit", + "url": "https://github.com/orcasgit/python-fitbit", + "rel": "/software/repository/github/orcasgit/python-fitbit", + "avatar": "https://avatars.githubusercontent.com/u/9833?v=4", + "description": "Fitbit API Python Client Implementation", "topics": [] }, { - "uid": "gitlab/mule-tools/package-x", - "url": "https://gitlab.com/mule-tools/package-x", - "rel": "/software/repository/gitlab/mule-tools/package-x", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/37935976/PackageXIcon.png", - "description": "A re-publication of [Package-X](http://web.archive.org/web/20220619174704/packagex.hepforge.org/). All credit to Hiren Patel!", + "uid": "github/bempp/kifmm", + "url": "https://github.com/bempp/kifmm", + "rel": "/software/repository/github/bempp/kifmm", + "avatar": "https://avatars.githubusercontent.com/u/693670?v=4", + "description": "Fast Multipole Methods in Rust", "topics": [] }, { - "uid": "gitlab/elsi_project/elsi_interface", - "url": "https://gitlab.com/elsi_project/elsi_interface", - "rel": "/software/repository/gitlab/elsi_project/elsi_interface", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/20804728/elsi_200629.png", - "description": "ELSI: A software interface designed for electronic structure codes to connect with ELPA, libOMM, PEXSI, EigenExa, SLEPc, NTPoly, BSEPACK, LAPACK, MAGMA, and other solver libraries.", - "topics": [] + "uid": "github/bempp/bempp-cl", + "url": "https://github.com/bempp/bempp-cl", + "rel": "/software/repository/github/bempp/bempp-cl", + "avatar": "https://avatars.githubusercontent.com/u/693670?v=4", + "description": "A fast Python based just-in-time compiling boundary element library", + "topics": [] }, { - "uid": "gitlab/leelamichaels/Omega", - "url": "https://gitlab.com/leelamichaels/Omega", - "rel": "/software/repository/gitlab/leelamichaels/Omega", - "avatar": "https://gitlab.comNone", - "description": "Code Omega release copy", - "topics": [] + "uid": "github/jackmwolf/tehtuner", + "url": "https://github.com/jackmwolf/tehtuner", + "rel": "/software/repository/github/jackmwolf/tehtuner", + "avatar": "https://avatars.githubusercontent.com/u/38739875?v=4", + "description": "An R Package to Fit and Tune to Models to Detect Treatment Effect Heterogeneity ", + "topics": [ + "r", + "clinical-trials", + "subgroup-identification", + "heterogeneity-of-treatment-effect" + ] }, { - "uid": "gitlab/leelamichaels/Elysium", - "url": "https://gitlab.com/leelamichaels/Elysium", - "rel": "/software/repository/gitlab/leelamichaels/Elysium", - "avatar": "https://gitlab.comNone", - "description": "Code Elysium release copy", - "topics": [] + "uid": "github/projectcuisines/thai_trilogy_code", + "url": "https://github.com/projectcuisines/thai_trilogy_code", + "rel": "/software/repository/github/projectcuisines/thai_trilogy_code", + "avatar": "https://avatars.githubusercontent.com/u/68251081?v=4", + "description": "Python code to postprocess, analyse, and visualise THAI models output ", + "topics": [ + "atmospheric-modelling", + "exoplanets", + "gcm", + "trappist-1" + ] }, { - "uid": "gitlab/leelamichaels/Infinity", - "url": "https://gitlab.com/leelamichaels/Infinity", - "rel": "/software/repository/gitlab/leelamichaels/Infinity", - "avatar": "https://gitlab.comNone", - "description": "Code Infinity release copy", + "uid": "github/JiangFangzhou/SIDM", + "url": "https://github.com/JiangFangzhou/SIDM", + "rel": "/software/repository/github/JiangFangzhou/SIDM", + "avatar": "https://avatars.githubusercontent.com/u/6954718?v=4", + "description": "analytical model for the density profiles of self-interacting dark-matter halos with inhabitant galaxies", "topics": [] }, { - "uid": "gitlab/leelamichaels/Tranquillity", - "url": "https://gitlab.com/leelamichaels/Tranquillity", - "rel": "/software/repository/gitlab/leelamichaels/Tranquillity", - "avatar": "https://gitlab.comNone", - "description": "Code Tranquillity release copy", - "topics": [] + "uid": "github/mxwalbert/cohesivm", + "url": "https://github.com/mxwalbert/cohesivm", + "rel": "/software/repository/github/mxwalbert/cohesivm", + "avatar": "https://avatars.githubusercontent.com/u/84664695?v=4", + "description": "Combinatorial h+/e- Sample Investigation using Voltaic Measurements", + "topics": [ + "lab-automation", + "materials-science", + "python", + "combinatorial-approach", + "high-throughput-analysis" + ] }, { - "uid": "gitlab/leelamichaels/Burning_Arrow", - "url": "https://gitlab.com/leelamichaels/Burning_Arrow", - "rel": "/software/repository/gitlab/leelamichaels/Burning_Arrow", - "avatar": "https://gitlab.comNone", - "description": "Code Burning Arrow release copy", - "topics": [] + "uid": "github/nbisweden/MrBayes", + "url": "https://github.com/NBISweden/MrBayes", + "rel": "/software/repository/github/nbisweden/MrBayes", + "avatar": "https://avatars.githubusercontent.com/u/1224807?v=4", + "description": "MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:", + "topics": [ + "phylogenetics", + "bayesian-inference", + "markov-chain-monte-carlo", + "research-tool", + "bioinformatics" + ] }, { - "uid": "gitlab/joseaher/astroplotlib", - "url": "https://gitlab.com/joseaher/astroplotlib", - "rel": "/software/repository/gitlab/joseaher/astroplotlib", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/NASA-Planetary-Science/Pade-disk-code", + "url": "https://github.com/NASA-Planetary-Science/Pade-disk-code", + "rel": "/software/repository/github/NASA-Planetary-Science/Pade-disk-code", + "avatar": "https://avatars.githubusercontent.com/u/13382964?v=4", + "description": "Fortran90 code to simulate protoplanetary disk turbulence using Pade/compact differencing.", "topics": [] }, { - "uid": "gitlab/rki_bioinformatics/IDeFIX", - "url": "https://gitlab.com/rki_bioinformatics/IDeFIX", - "rel": "/software/repository/gitlab/rki_bioinformatics/IDeFIX", - "avatar": "https://gitlab.comNone", - "description": "Index checking for improved demultiplexing of NGS data", - "topics": [] + "uid": "github/CMakePP/CMakePPLang", + "url": "https://github.com/CMakePP/CMakePPLang", + "rel": "/software/repository/github/CMakePP/CMakePPLang", + "avatar": "https://avatars.githubusercontent.com/u/44040020?v=4", + "description": "Object-oriented extension to the CMake language.", + "topics": [ + "object-oriented-programming", + "cmake" + ] }, { - "uid": "gitlab/rki_bioinformatics/purple", - "url": "https://gitlab.com/rki_bioinformatics/purple", - "rel": "/software/repository/gitlab/rki_bioinformatics/purple", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/11392663/Purple_128.png", - "description": "Picking Unique Relevant Peptides for viraL Experiments\r\n\r\nAuthors: Johanna Lechner [@LechnerJ], Pauline Hiortand Felix Hartkopf [@HartkopfF]\r\n\r\nSupport: https://gitlab.com/HartkopfF/Purple\r\n\r\nDownload: https://gitlab.com/HartkopfF/Purple/releases", - "topics": [] + "uid": "github/CMakePP/CMinx", + "url": "https://github.com/CMakePP/CMinx", + "rel": "/software/repository/github/CMakePP/CMinx", + "avatar": "https://avatars.githubusercontent.com/u/44040020?v=4", + "description": "Generates API documentation for CMake functions and macros", + "topics": [ + "cmake", + "documentation-tool" + ] }, { - "uid": "gitlab/rki_bioinformatics/HiLive2", - "url": "https://gitlab.com/rki_bioinformatics/HiLive2", - "rel": "/software/repository/gitlab/rki_bioinformatics/HiLive2", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7428486/hilive2_logo.png", - "description": "HiLive2 is a read mapping tool that maps Illumina HiSeq (or comparable) reads right in the moment when they are produced. Please create issues for HiLive2 at https://gitlab.com/lokat/HiLive2.", - "topics": [] + "uid": "github/tanner-trickle/EXCEED-DM", + "url": "https://github.com/tanner-trickle/EXCEED-DM", + "rel": "/software/repository/github/tanner-trickle/EXCEED-DM", + "avatar": "https://avatars.githubusercontent.com/u/46977645?v=4", + "description": "EXCEED-DM: EXtended Calculation of Electronic Excitations for Direct detection of Dark Matter", + "topics": [ + "physics", + "particle-physics", + "materials-science", + "condensed-matter-physics" + ] }, { - "uid": "gitlab/mobse/source-code", - "url": "https://gitlab.com/mobse/source-code", - "rel": "/software/repository/gitlab/mobse/source-code", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/15981708/mobse_code_copia.png", - "description": null, + "uid": "github/RosettaCommons/RFDesign", + "url": "https://github.com/RosettaCommons/RFDesign", + "rel": "/software/repository/github/RosettaCommons/RFDesign", + "avatar": "https://avatars.githubusercontent.com/u/3856847?v=4", + "description": "Protein hallucination and inpainting with RoseTTAFold", "topics": [] }, { - "uid": "gitlab/octopus-code/octopus", - "url": "https://gitlab.com/octopus-code/octopus", - "rel": "/software/repository/gitlab/octopus-code/octopus", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/2018405/octopus.png", - "description": "Real-space Time-Dependent Density Functional Theory code", + "uid": "github/RosettaCommons/RoseTTAFold", + "url": "https://github.com/RosettaCommons/RoseTTAFold", + "rel": "/software/repository/github/RosettaCommons/RoseTTAFold", + "avatar": "https://avatars.githubusercontent.com/u/3856847?v=4", + "description": "This package contains deep learning models and related scripts for RoseTTAFold", "topics": [] }, { - "uid": "gitlab/etienne.behar/menura", - "url": "https://gitlab.com/etienne.behar/menura", - "rel": "/software/repository/gitlab/etienne.behar/menura", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/24686946/menura_logo2_thumb.png", - "description": "Menura is a space plasma simulation code. It is built around a hybrid Particle In Cell (PIC) solver, running on Graphics Processing Units. More informations on https://menura.readthedocs.io", + "uid": "github/genai-impact/ecologits", + "url": "https://github.com/genai-impact/ecologits", + "rel": "/software/repository/github/genai-impact/ecologits", + "avatar": "https://avatars.githubusercontent.com/u/166227099?v=4", + "description": "\ud83c\udf31 EcoLogits tracks the energy consumption and environmental footprint of using generative AI models through APIs.", "topics": [ - "plasma", - "simulation", - "solar wind", - "turbulence" + "genai", + "generative-ai", + "green-ai", + "green-software", + "llm", + "llm-inference", + "python", + "sustainability", + "sustainable-ai" ] }, { - "uid": "gitlab/chjordan/sslf", - "url": "https://gitlab.com/chjordan/sslf", - "rel": "/software/repository/gitlab/chjordan/sslf", - "avatar": "https://gitlab.comNone", - "description": "Simple Spectral Line Finder", + "uid": "github/rice-solar-physics/HYDRAD", + "url": "https://github.com/rice-solar-physics/HYDRAD", + "rel": "/software/repository/github/rice-solar-physics/HYDRAD", + "avatar": "https://avatars.githubusercontent.com/u/8676158?v=4", + "description": "HYDrodynamics and RADiation Code for computing solutions to field-aligned hydrodynamic equations in coronal loops", "topics": [] }, { - "uid": "gitlab/fibreglass/pivc", - "url": "https://gitlab.com/fibreglass/pivc", - "rel": "/software/repository/gitlab/fibreglass/pivc", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/rice-solar-physics/EBTEL", + "url": "https://github.com/rice-solar-physics/EBTEL", + "rel": "/software/repository/github/rice-solar-physics/EBTEL", + "avatar": "https://avatars.githubusercontent.com/u/8676158?v=4", + "description": "Enthalpy-Based Thermal Evolution of Loops (EBTEL) model coded in the IDL language by J. A. Klimchuk, S. Patsourakos, and P.J. Cargill ", "topics": [] }, { - "uid": "gitlab/multigris/mgris", - "url": "https://gitlab.com/multigris/mgris", - "rel": "/software/repository/gitlab/multigris/mgris", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/34419388/multigris_small.png", - "description": "MULTIGRIS (\"mgris\") is a Bayesian multi-dimensional grid search using PyMC to extract the posterior distributions of primary grid parameters and predict unobserved parameters/observables.", + "uid": "github/mathjax/MathJax", + "url": "https://github.com/mathjax/MathJax", + "rel": "/software/repository/github/mathjax/MathJax", + "avatar": "https://avatars1.githubusercontent.com/u/252187?v=4", + "description": "Beautiful math in all browsers", "topics": [ - "Bayesian statistics", - "astrophysics", - "grid", - "mcmc", - "modelling" + "javascript", + "mathematics", + "latex", + "asciimath-notation", + "mathml", + "mathjax", + "typography", + "svg", + "html", + "css", + "accessibility" ] }, { - "uid": "gitlab/mcfrith/lamassemble", - "url": "https://gitlab.com/mcfrith/lamassemble", - "rel": "/software/repository/gitlab/mcfrith/lamassemble", - "avatar": "https://gitlab.comNone", - "description": "Merges overlapping \"long\" DNA reads into a consensus sequences", - "topics": [] - }, - { - "uid": "gitlab/mcfrith/tantan", - "url": "https://gitlab.com/mcfrith/tantan", - "rel": "/software/repository/gitlab/mcfrith/tantan", - "avatar": "https://gitlab.comNone", - "description": "low complexity and tandem repeat masker for biosequences", - "topics": [] - }, - { - "uid": "gitlab/mcfrith/last", - "url": "https://gitlab.com/mcfrith/last", - "rel": "/software/repository/gitlab/mcfrith/last", - "avatar": "https://gitlab.comNone", - "description": "finds & aligns related regions of sequences. LAST is designed for moderately large data (e.g. genomes, DNA reads, proteomes).", + "uid": "github/bd-j/sedpy", + "url": "https://github.com/bd-j/sedpy", + "rel": "/software/repository/github/bd-j/sedpy", + "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", + "description": "Utilities for astronomical spectral energy distributions", "topics": [] }, { - "uid": "gitlab/mcfrith/paraclu", - "url": "https://gitlab.com/mcfrith/paraclu", - "rel": "/software/repository/gitlab/mcfrith/paraclu", - "avatar": "https://gitlab.comNone", - "description": "Parametric clustering of genomic and transcriptomic features", - "topics": [] + "uid": "github/bd-j/prospector", + "url": "https://github.com/bd-j/prospector", + "rel": "/software/repository/github/bd-j/prospector", + "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", + "description": "Python code for Stellar Population Inference from Spectra and SEDs", + "topics": [ + "stellar-population-properties", + "fitting" + ] }, { - "uid": "gitlab/vibes-developers/vibes", - "url": "https://gitlab.com/vibes-developers/vibes", - "rel": "/software/repository/gitlab/vibes-developers/vibes", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/19053725/FV_green.png", - "description": "[FHI-vibes](https://vibes-developers.gitlab.io/vibes/): Vibrational simulations with python powered by ASE and FHI-aims.", + "uid": "github/bd-j/forcepho", + "url": "https://github.com/bd-j/forcepho", + "rel": "/software/repository/github/bd-j/forcepho", + "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", + "description": "Generative modeling galaxy photometry for JWST", "topics": [] }, { - "uid": "gitlab/pythia-uq/pythia", - "url": "https://gitlab.com/pythia-uq/pythia", - "rel": "/software/repository/gitlab/pythia-uq/pythia", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/45854627/logo_small.png", - "description": "PyThia Uncertainty Quantification Toolbox", + "uid": "github/stevenweaver/seqcomplexity", + "url": "https://github.com/stevenweaver/seqcomplexity", + "rel": "/software/repository/github/stevenweaver/seqcomplexity", + "avatar": "https://avatars.githubusercontent.com/u/535261?v=4", + "description": "Rust package that calculates sequence complexity from FastQ file", "topics": [] }, { - "uid": "gitlab/materials-modeling/calorine", - "url": "https://gitlab.com/materials-modeling/calorine", - "rel": "/software/repository/gitlab/materials-modeling/calorine", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/26123426/salamander.png", - "description": "[A python tool box for GPUMD simulations](https://calorine.materialsmodeling.org/)", + "uid": "github/zhangjunpeng411/Scan", + "url": "https://github.com/zhangjunpeng411/Scan", + "rel": "/software/repository/github/zhangjunpeng411/Scan", + "avatar": "https://avatars.githubusercontent.com/u/10843899?v=4", + "description": "Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data", "topics": [ - "atomic scale simulation", - "condensed matter physics", - "force constants", - "gpumd", - "hiphive", - "machine learning potentials", - "molecular dynamics", - "neural network potentials", - "phonons", - "physics", - "python", - "thermal conductivity", - "thermal transport" + "gene-regulation", + "mirna", + "mirna-targets", + "single-cell-analysis", + "single-cell-rna-seq" ] }, { - "uid": "gitlab/sybreton/apollinaire", - "url": "https://gitlab.com/sybreton/apollinaire", - "rel": "/software/repository/gitlab/sybreton/apollinaire", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/17312517/apollinaire_logo_2.png", - "description": "Python tools for helio- and asteroseismic peakbagging frameworks.", - "topics": [] - }, - { - "uid": "gitlab/cosmograil/starred", - "url": "https://gitlab.com/cosmograil/starred", - "rel": "/software/repository/gitlab/cosmograil/starred", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/38194257/starred_main_image.png", - "description": "A two-channel deconvolution method with Starlet regularization", + "uid": "github/zhangjunpeng411/SCOM", + "url": "https://github.com/zhangjunpeng411/SCOM", + "rel": "/software/repository/github/zhangjunpeng411/SCOM", + "avatar": "https://avatars.githubusercontent.com/u/10843899?v=4", + "description": "Pan-cancer characterization of ncRNA synergistic competition", "topics": [ - "Deconvolution", - "astronomy", - "psf", - "python" + "ncrna", + "cerna", + "tumor" ] }, { - "uid": "gitlab/cosmograil/PyCS3", - "url": "https://gitlab.com/cosmograil/PyCS3", - "rel": "/software/repository/gitlab/cosmograil/PyCS3", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/7888463/cover_image_1.png", - "description": "PyCS for python 3", + "uid": "github/MMV-Lab/mmv_im2im", + "url": "https://github.com/MMV-Lab/mmv_im2im", + "rel": "/software/repository/github/MMV-Lab/mmv_im2im", + "avatar": "https://avatars.githubusercontent.com/u/85467623?v=4", + "description": "Python package for deep learning based image to image transformation", "topics": [] }, { - "uid": "gitlab/djsmithbham/cnearest", - "url": "https://gitlab.com/djsmithbham/cnearest", - "rel": "/software/repository/gitlab/djsmithbham/cnearest", - "avatar": "https://gitlab.comNone", - "description": "C++ nearest neighbour regularized stokeslets", + "uid": "github/AstrobioMike/GToTree", + "url": "https://github.com/AstrobioMike/GToTree", + "rel": "/software/repository/github/AstrobioMike/GToTree", + "avatar": "https://avatars.githubusercontent.com/u/13923308?v=4", + "description": "A user-friendly workflow for phylogenomics", "topics": [] }, { - "uid": "gitlab/metafundev/metafun", - "url": "https://gitlab.com/metafundev/metafun", - "rel": "/software/repository/gitlab/metafundev/metafun", - "avatar": "https://gitlab.comNone", - "description": "", - "topics": [] + "uid": "github/cmgcds/fastvpinns", + "url": "https://github.com/cmgcds/fastvpinns", + "rel": "/software/repository/github/cmgcds/fastvpinns", + "avatar": "https://avatars.githubusercontent.com/u/12926724?v=4", + "description": "FastVPINNs - A tensor-driven acceleration of VPINNs for complex geometries", + "topics": [ + "deep-learning", + "inverse-problems", + "neural-network", + "partial-differential-equations", + "physics-informed-neural-networks", + "pinn", + "scientific-machine-learning", + "tensorflow2" + ] }, { - "uid": "gitlab/medbio/disgenet2r", - "url": "https://gitlab.com/medbio/disgenet2r", - "rel": "/software/repository/gitlab/medbio/disgenet2r", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58949561/Profile_Pic_Disgenet.png", - "description": null, - "topics": [] + "uid": "github/Starfish-develop/Starfish", + "url": "https://github.com/Starfish-develop/Starfish", + "rel": "/software/repository/github/Starfish-develop/Starfish", + "avatar": "https://avatars.githubusercontent.com/u/85192441?v=4", + "description": "Tools for Flexible Spectroscopic Inference", + "topics": [ + "starfish", + "python", + "spectra", + "astronomy", + "astrophysics", + "inference", + "mcmc" + ] }, { - "uid": "gitlab/cosapp/cosapp", - "url": "https://gitlab.com/cosapp/cosapp", - "rel": "/software/repository/gitlab/cosapp/cosapp", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/19967329/cosapp_web.png", - "description": "CoSApp core package", + "uid": "github/AninaTimmermann/ECCOplanets", + "url": "https://github.com/AninaTimmermann/ECCOplanets", + "rel": "/software/repository/github/AninaTimmermann/ECCOplanets", + "avatar": "https://avatars.githubusercontent.com/u/111730996?v=4", + "description": "Python code to simulate the formation of rocky planets in chemical equilibrium (based on Gibbs energy minimisation) and analysis of planet compositions.", + "topics": [ + "chemical-equilibrium", + "planet-formation", + "planet-composition", + "rocky-planets" + ] + }, + { + "uid": "github/yangfangs/KPP", + "url": "https://github.com/yangfangs/KPP", + "rel": "/software/repository/github/yangfangs/KPP", + "avatar": "https://avatars.githubusercontent.com/u/10369795?v=4", + "description": "KPP (kmer phylogenetic profile) algorithm", "topics": [] }, { - "uid": "gitlab/mauricemolli/petitRADTRANS", - "url": "https://gitlab.com/mauricemolli/petitRADTRANS", - "rel": "/software/repository/gitlab/mauricemolli/petitRADTRANS", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/4048028/logo_radtrans.gif", - "description": null, + "uid": "github/yangfangs/test_GFICLEE", + "url": "https://github.com/yangfangs/test_GFICLEE", + "rel": "/software/repository/github/yangfangs/test_GFICLEE", + "avatar": "https://avatars.githubusercontent.com/u/10369795?v=4", + "description": "test GFICLEE model", "topics": [] }, { - "uid": "gitlab/ChemBioHub/tpmap", - "url": "https://gitlab.com/ChemBioHub/tpmap", - "rel": "/software/repository/gitlab/ChemBioHub/tpmap", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/18237261/favicon.png", - "description": "Thermal Profiling Meltome Analysis Program", + "uid": "github/retostauffer/python-colorspace", + "url": "https://github.com/retostauffer/python-colorspace", + "rel": "/software/repository/github/retostauffer/python-colorspace", + "avatar": "https://avatars.githubusercontent.com/u/13628564?v=4", + "description": "Python colorspace implementation. Documentation available on https://retostauffer.github.io/python-colorspace/. The latest release is available via the Python Package Index (PyPI) via https://pypi.org/project/colorspace/", "topics": [] }, { - "uid": "gitlab/astrogal/slideParam", - "url": "https://gitlab.com/astrogal/slideParam", - "rel": "/software/repository/gitlab/astrogal/slideParam", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/76146374/sliceParam_logo.png", - "description": "2D galactic data visualization tool in python", + "uid": "github/pysam-developers/pysam", + "url": "https://github.com/pysam-developers/pysam", + "rel": "/software/repository/github/pysam-developers/pysam", + "avatar": "https://avatars.githubusercontent.com/u/6598771?v=4", + "description": "Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.", "topics": [] }, { - "uid": "gitlab/dalton/dalton", - "url": "https://gitlab.com/dalton/dalton", - "rel": "/software/repository/gitlab/dalton/dalton", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/4007652/pRZ6xe8j_400x400.jpg", - "description": "Public Dalton source code repository.", + "uid": "github/christopherburke/tess-point", + "url": "https://github.com/christopherburke/tess-point", + "rel": "/software/repository/github/christopherburke/tess-point", + "avatar": "https://avatars.githubusercontent.com/u/12038053?v=4", + "description": "Determine pixel coordinates for TESS targets", "topics": [] }, { - "uid": "gitlab/cracklet/cracklet", - "url": "https://gitlab.com/cracklet/cracklet", - "rel": "/software/repository/gitlab/cracklet/cracklet", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/25188173/logo_large.png", - "description": "cRacklet is a C++ boundary element library based on a spectral formulation of the elastodynamic wave equations in continuum solids.", + "uid": "github/MaayanLab/signature-commons-ui", + "url": "https://github.com/MaayanLab/signature-commons-ui", + "rel": "/software/repository/github/MaayanLab/signature-commons-ui", + "avatar": "https://avatars.githubusercontent.com/u/5282243?v=4", + "description": "A front-end UI for demoing API integration", "topics": [] }, { - "uid": "gitlab/petsc/petsc", - "url": "https://gitlab.com/petsc/petsc", - "rel": "/software/repository/gitlab/petsc/petsc", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/13882401/PETSc_RBG-logo.png", - "description": "PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.", + "uid": "github/staphopia/staphopia-paper", + "url": "https://github.com/staphopia/staphopia-paper", + "rel": "/software/repository/github/staphopia/staphopia-paper", + "avatar": "https://avatars0.githubusercontent.com/u/9426738?v=4", + "description": "Code used for Staphopia manuscript", "topics": [] }, { - "uid": "gitlab/thartwig/asloth", - "url": "https://gitlab.com/thartwig/asloth", - "rel": "/software/repository/gitlab/thartwig/asloth", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/35049365/ASLOTH_logo_official.jpg", - "description": "Semi-analytical model A-SLOTH (Ancient Stars and Local Observables by Tracing Halos)", + "uid": "github/DESI-UR/VAST", + "url": "https://github.com/DESI-UR/VAST", + "rel": "/software/repository/github/DESI-UR/VAST", + "avatar": "https://avatars.githubusercontent.com/u/30055315?v=4", + "description": "Void Analysis Software Toolkit", "topics": [] }, { - "uid": "gitlab/german.tischler/libmaus2", - "url": "https://gitlab.com/german.tischler/libmaus2", - "rel": "/software/repository/gitlab/german.tischler/libmaus2", - "avatar": "https://gitlab.comNone", - "description": "collection of data structures and algorithms", + "uid": "github/bbbbbbzhou/MDPET", + "url": "https://github.com/bbbbbbzhou/MDPET", + "rel": "/software/repository/github/bbbbbbzhou/MDPET", + "avatar": "https://avatars.githubusercontent.com/u/61164038?v=4", + "description": "MDPET: A Unified Motion Correction and Denoising Adversarial Network for Low-dose Gated PET (IEEE Transactions on Medical Imaging, 2021)", "topics": [] }, { - "uid": "gitlab/german.tischler/biobambam2", - "url": "https://gitlab.com/german.tischler/biobambam2", - "rel": "/software/repository/gitlab/german.tischler/biobambam2", - "avatar": "https://gitlab.comNone", - "description": "Tools for early stage alignment file processing", - "topics": [] - }, - { - "uid": "gitlab/mainlabwsu/bims", - "url": "https://gitlab.com/mainlabwsu/bims", - "rel": "/software/repository/gitlab/mainlabwsu/bims", - "avatar": "https://gitlab.comNone", - "description": "BIMS", - "topics": [] - }, - { - "uid": "gitlab/cosmology-ethz/ufig", - "url": "https://gitlab.com/cosmology-ethz/ufig", - "rel": "/software/repository/gitlab/cosmology-ethz/ufig", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/64659173/example_image_small.jpg", - "description": "UFig: The Ultra Fast Image Generator", - "topics": [] - }, - { - "uid": "gitlab/ezlab/busco", - "url": "https://gitlab.com/ezlab/busco", - "rel": "/software/repository/gitlab/ezlab/busco", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/1544766/Screen_Shot_2019-11-26_at_17.26.57.png", - "description": "Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO)", - "topics": [] + "uid": "github/EMSL-Computing/Pore2Chip", + "url": "https://github.com/EMSL-Computing/Pore2Chip", + "rel": "/software/repository/github/EMSL-Computing/Pore2Chip", + "avatar": "https://avatars.githubusercontent.com/u/43354427?v=4", + "description": "A python package that takes XCT images of porous materials and generates representative digital twin micromodels", + "topics": [ + "lab", + "openpnm", + "pore-network", + "soil", + "xct", + "experimental-design", + "flow", + "model-data-fusion", + "neural-networks", + "reactive-transport", + "terraforms", + "lab-on-chip", + "microfluidics-chip-enrichment", + "porous-materials", + "porous-media", + "python", + "scientific-visualization", + "data-analysis", + "data-visualization", + "machine-learning" + ] }, { - "uid": "gitlab/kmrajwade/iqrm_apollo", - "url": "https://gitlab.com/kmrajwade/iqrm_apollo", - "rel": "/software/repository/gitlab/kmrajwade/iqrm_apollo", - "avatar": "https://gitlab.comNone", - "description": "A standalone code to clean narrow-band RFI using Inter-Quartile Range Mitigation (IQRM) algorithm. The code works on SIGPROC format data and outputs a cleaned SIGRPOC format file. The output file is compatible with other standard pulsar software.", + "uid": "github/wmglab-duke/ascent", + "url": "https://github.com/wmglab-duke/ascent", + "rel": "/software/repository/github/wmglab-duke/ascent", + "avatar": "https://avatars.githubusercontent.com/u/86266914?v=4", + "description": "ASCENT (Automated Simulations to Characterize Electrical Nerve Thresholds): A pipeline for sample-specific computational modeling of electrical stimulation of peripheral nerves", "topics": [] }, { - "uid": "gitlab/sigcorr/sigcorr", - "url": "https://gitlab.com/sigcorr/sigcorr", - "rel": "/software/repository/gitlab/sigcorr/sigcorr", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/keatonb/Pyriod", + "url": "https://github.com/keatonb/Pyriod", + "rel": "/software/repository/github/keatonb/Pyriod", + "avatar": "https://avatars.githubusercontent.com/u/6413923?v=4", + "description": "Python implementation of basic period detection and fitting routines for astronomical time series.", "topics": [] }, { - "uid": "gitlab/ComputationalScience/idinn", - "url": "https://gitlab.com/ComputationalScience/idinn", - "rel": "/software/repository/gitlab/ComputationalScience/idinn", - "avatar": "https://gitlab.comNone", - "description": "Inventory dynamics\u2013informed neural networks for solving single-sourcing and dual-sourcing problems.", + "uid": "github/keatonb/TESS_PRF", + "url": "https://github.com/keatonb/TESS_PRF", + "rel": "/software/repository/github/keatonb/TESS_PRF", + "avatar": "https://avatars.githubusercontent.com/u/6413923?v=4", + "description": "Tools to display the TESS pixel response function (PRF) at any location on the detector", "topics": [] }, { - "uid": "gitlab/loic.cg.rossi/pymiedap", - "url": "https://gitlab.com/loic.cg.rossi/pymiedap", - "rel": "/software/repository/gitlab/loic.cg.rossi/pymiedap", - "avatar": "https://gitlab.comNone", - "description": "PyMieDAP = Python Mie Doubling Adding Program. A radiative transfer code with polarization.", + "uid": "github/casaluca/bolometric-corrections", + "url": "https://github.com/casaluca/bolometric-corrections", + "rel": "/software/repository/github/casaluca/bolometric-corrections", + "avatar": "https://avatars.githubusercontent.com/u/35479737?v=4", + "description": "compute bolometric corrections and synthetic colours for input values of stellar parameters", "topics": [ + "stars", + "isochrones", + "photometry", + "colours", + "bolometric-corrections", + "synthetic-colours", "astronomy", - "atmospheres", - "polarization", - "radiative transfer" + "astrophysics" ] }, { - "uid": "gitlab/davidwoodburn/r3f", - "url": "https://gitlab.com/davidwoodburn/r3f", - "rel": "/software/repository/gitlab/davidwoodburn/r3f", - "avatar": "https://gitlab.comNone", - "description": "A library for three-dimensional, reference-frame conversions", + "uid": "github/circuitgraph/circuitgraph", + "url": "https://github.com/circuitgraph/circuitgraph", + "rel": "/software/repository/github/circuitgraph/circuitgraph", + "avatar": "https://avatars1.githubusercontent.com/u/68197630?v=4", + "description": "Tools for working with circuits as graphs in python", "topics": [ - "ECEF", - "Geodetic", - "Inertial measurement unit", - "navigation", - "reference frames", - "rotation" + "python", + "boolean-circuits", + "satisfiability", + "netlist", + "graphs", + "eda" ] }, { - "uid": "gitlab/davidwoodburn/itrm", - "url": "https://gitlab.com/davidwoodburn/itrm", - "rel": "/software/repository/gitlab/davidwoodburn/itrm", - "avatar": "https://gitlab.comNone", - "description": "Interactive Terminal Utilities", - "topics": [ - "ascii-art", - "interactive", - "plotting", - "terminal" - ] + "uid": "github/ideasrule/platon", + "url": "https://github.com/ideasrule/platon", + "rel": "/software/repository/github/ideasrule/platon", + "avatar": "https://avatars.githubusercontent.com/u/1724065?v=4", + "description": "Fast exoplanet transmission spectrum calculator", + "topics": [] }, { - "uid": "gitlab/AstroVian/bmarxiv", - "url": "https://gitlab.com/AstroVian/bmarxiv", - "rel": "/software/repository/gitlab/AstroVian/bmarxiv", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/28500894/PAph_dog.gif", - "description": null, + "uid": "github/ideasrule/pyTPCI", + "url": "https://github.com/ideasrule/pyTPCI", + "rel": "/software/repository/github/ideasrule/pyTPCI", + "avatar": "https://avatars.githubusercontent.com/u/1724065?v=4", + "description": "Python version of TPCI", "topics": [] }, { - "uid": "gitlab/vincent-sater/umigen", - "url": "https://gitlab.com/vincent-sater/umigen", - "rel": "/software/repository/gitlab/vincent-sater/umigen", - "avatar": "https://gitlab.comNone", - "description": "UMI-based reads simulator for variant calling evaluation in paired-end sequencing NGS libraries", + "uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", + "url": "https://github.com/joergbuchwald/joss_ogs6py_VTUinterface", + "rel": "/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", + "avatar": "https://avatars.githubusercontent.com/u/44933043?v=4", + "description": null, "topics": [] }, { - "uid": "gitlab/ostrokach/proteinsolver", - "url": "https://gitlab.com/ostrokach/proteinsolver", - "rel": "/software/repository/gitlab/ostrokach/proteinsolver", - "avatar": "https://gitlab.comNone", - "description": "Graph neural network capable of generating novel amino acid sequences that fold into proteins with predetermined topologies.\r\n\r\n", + "uid": "github/markheckmann/OpenRepGrid.ic", + "url": "https://github.com/markheckmann/OpenRepGrid.ic", + "rel": "/software/repository/github/markheckmann/OpenRepGrid.ic", + "avatar": "https://avatars.githubusercontent.com/u/152927?v=4", + "description": "shiny app for interpretive clustering of repgrids:", "topics": [ - "protein design", - "python" + "repgrid", + "clustering", + "repertory", + "grid", + "constructs", + "shiny" ] }, { - "uid": "gitlab/RKIBioinformaticsPipelines/QCumber", - "url": "https://gitlab.com/RKIBioinformaticsPipelines/QCumber", - "rel": "/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", - "avatar": "https://gitlab.comNone", - "description": "quality control of genomic sequences", + "uid": "github/Extraweich/homopy", + "url": "https://github.com/Extraweich/homopy", + "rel": "/software/repository/github/Extraweich/homopy", + "avatar": "https://avatars.githubusercontent.com/u/50912803?v=4", + "description": "Your solution for stiffness problems", "topics": [] }, { - "uid": "gitlab/Molcas/OpenMolcas", - "url": "https://gitlab.com/Molcas/OpenMolcas", - "rel": "/software/repository/gitlab/Molcas/OpenMolcas", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/3536517/logo_open_flat.png", - "description": "OpenMolcas is a quantum chemistry software package.\r\n\r\nThe key feature of OpenMolcas is the multiconfigurational approach to the electronic structure.", - "topics": [ - "chemistry", - "physics", - "quantum" - ] + "uid": "github/thomgrand/fim-python", + "url": "https://github.com/thomgrand/fim-python", + "rel": "/software/repository/github/thomgrand/fim-python", + "avatar": "https://avatars.githubusercontent.com/u/73308131?v=4", + "description": "This repository implements the Fast Iterative Method (FIM) for use in python", + "topics": [] }, { - "uid": "gitlab/imoralc/malu-ifs-visualization-tool", - "url": "https://gitlab.com/imoralc/malu-ifs-visualization-tool", - "rel": "/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/databio/GenomicDistributions", + "url": "https://github.com/databio/GenomicDistributions", + "rel": "/software/repository/github/databio/GenomicDistributions", + "avatar": "https://avatars.githubusercontent.com/u/13696008?v=4", + "description": "Calculate and plot distributions of genomic ranges", "topics": [] }, { - "uid": "gitlab/remram44/taguette", - "url": "https://gitlab.com/remram44/taguette", - "rel": "/software/repository/gitlab/remram44/taguette", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/8339211/taguette.png", - "description": "Free and open source qualitative research tool", + "uid": "github/PyFstat/PyFstat", + "url": "https://github.com/PyFstat/PyFstat", + "rel": "/software/repository/github/PyFstat/PyFstat", + "avatar": "https://avatars.githubusercontent.com/u/60369643?v=4", + "description": "a python package for gravitational wave analysis with the F-statistic", "topics": [ - "document", - "hacktoberfest", - "highlights", - "notes", - "qual", - "qualitative", - "research", - "tagging", - "tags", - "text" + "python3", + "gravitational-waves", + "ligo", + "neutron-star", + "virgo", + "gravity", + "astrophysics", + "pycuda" ] }, { - "uid": "gitlab/davidtourigny/dynamic-fba", - "url": "https://gitlab.com/davidtourigny/dynamic-fba", - "rel": "/software/repository/gitlab/davidtourigny/dynamic-fba", - "avatar": "https://gitlab.comNone", - "description": "", - "topics": [] - }, - { - "uid": "gitlab/ENKI-portal/ThermoCodegen", - "url": "https://gitlab.com/ENKI-portal/ThermoCodegen", - "rel": "/software/repository/gitlab/ENKI-portal/ThermoCodegen", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/37653498/tcg_logo_cropped.png", - "description": "ThermoCodegen: a python/C++ package for the generation of custom thermodynamic models", + "uid": "github/EdgeVPNio/evio", + "url": "https://github.com/EdgeVPNio/evio", + "rel": "/software/repository/github/EdgeVPNio/evio", + "avatar": "https://avatars.githubusercontent.com/u/63874761?v=4", + "description": "Virtualized overlay networking for the fog. The Evio network spans the continuum, from the cloud to the edge, providing a virtual private layer 2 network suitable for edge devices in IoT workloads.", "topics": [] }, { - "uid": "gitlab/ENKI-portal/vaporock", - "url": "https://gitlab.com/ENKI-portal/vaporock", - "rel": "/software/repository/gitlab/ENKI-portal/vaporock", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/18914416/vaporock.png", - "description": "Thermodynamics of vaporized silicate rocks & melts for modeling magma ocean atmospheres and stellar nebula", + "uid": "github/SamDuffield/bmm", + "url": "https://github.com/SamDuffield/bmm", + "rel": "/software/repository/github/SamDuffield/bmm", + "avatar": "https://avatars.githubusercontent.com/u/34280297?v=4", + "description": "Map-matching using particle smoothing methods.", "topics": [] }, { - "uid": "gitlab/ENKI-portal/ThermoEngine", - "url": "https://gitlab.com/ENKI-portal/ThermoEngine", - "rel": "/software/repository/gitlab/ENKI-portal/ThermoEngine", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/2313798/Untitled.png", - "description": "Python, C, C++ and Objective C code that Implement thermodynamic properties of stoichiometric phases and solutions. This is the main code repository of the ENKI project.", + "uid": "github/fmihpc/vlasiator", + "url": "https://github.com/fmihpc/vlasiator", + "rel": "/software/repository/github/fmihpc/vlasiator", + "avatar": "https://avatars.githubusercontent.com/u/6056775?v=4", + "description": "Vlasiator - ten letters you can count on", "topics": [] }, { - "uid": "gitlab/chrjan/seq-seq-pan", - "url": "https://gitlab.com/chrjan/seq-seq-pan", - "rel": "/software/repository/gitlab/chrjan/seq-seq-pan", - "avatar": "https://gitlab.comNone", - "description": "seq-seq-pan is a workflow for the SEQuential alignment of SEQuences to build a PAN-genome data structure and a whole-genome-alignment.", + "uid": "github/fmihpc/analysator", + "url": "https://github.com/fmihpc/analysator", + "rel": "/software/repository/github/fmihpc/analysator", + "avatar": "https://avatars.githubusercontent.com/u/6056775?v=4", + "description": "Python based package for analyzing vlsv files produced by Vlasiator", "topics": [] }, { - "uid": "gitlab/bu_cnio/vulcanspot", - "url": "https://gitlab.com/bu_cnio/vulcanspot", - "rel": "/software/repository/gitlab/bu_cnio/vulcanspot", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12800427/logo.png", - "description": "", + "uid": "github/jet-net/JetNet", + "url": "https://github.com/jet-net/JetNet", + "rel": "/software/repository/github/jet-net/JetNet", + "avatar": "https://avatars.githubusercontent.com/u/86318214?v=4", + "description": "For developing and reproducing ML + HEP projects.", "topics": [] }, { - "uid": "gitlab/BioimageInformaticsGroup/openphi", - "url": "https://gitlab.com/BioimageInformaticsGroup/openphi", - "rel": "/software/repository/gitlab/BioimageInformaticsGroup/openphi", - "avatar": "https://gitlab.comNone", - "description": "Open PatHology Interface - A Python API for accessing iSyntax digital pathology images", - "topics": [] + "uid": "github/druglogics/pydruglogics", + "url": "https://github.com/druglogics/pydruglogics", + "rel": "/software/repository/github/druglogics/pydruglogics", + "avatar": "https://avatars.githubusercontent.com/u/56073408?v=4", + "description": "Construct, optimize Boolean models and perform in-silico perturbations of the models.", + "topics": [ + "bliss", + "boolean-model", + "drug-target-interactions", + "genetic-algorithm", + "hsa", + "drug-synergy" + ] }, { - "uid": "gitlab/robizzard/libcdict", - "url": "https://gitlab.com/rob.izzard/libcdict", - "rel": "/software/repository/gitlab/robizzard/libcdict", - "avatar": "https://gitlab.comNone", - "description": "A generic associative array, also know as dictionary or hash, library in C, based on uthash and extended to be more user friendly and include integration features such as JSON output.", + "uid": "github/seqan/flexbar", + "url": "https://github.com/seqan/flexbar", + "rel": "/software/repository/github/seqan/flexbar", + "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", + "description": "flexible barcode and adapter removal", "topics": [] }, { - "uid": "gitlab/emd-dev/emd", - "url": "https://gitlab.com/emd-dev/emd", - "rel": "/software/repository/gitlab/emd-dev/emd", - "avatar": "https://gitlab.comNone", - "description": "Empirical Mode Decomposition in Python\r\n\r\n\"pipeline", - "topics": [] + "uid": "github/seqan/lambda", + "url": "https://github.com/seqan/lambda", + "rel": "/software/repository/github/seqan/lambda", + "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", + "description": "LAMBDA \u2013 the Local Aligner for Massive Biological DatA ", + "topics": [ + "bioinformatics", + "blast", + "blast-searches", + "ncbi-taxonomy", + "alignment", + "metagenomics", + "protein-sequences", + "high-performance", + "cpp14", + "seqan" + ] }, { - "uid": "gitlab/sevecekp/sph", - "url": "https://gitlab.com/sevecekp/sph", - "rel": "/software/repository/gitlab/sevecekp/sph", - "avatar": "https://gitlab.comNone", - "description": "Library and graphical tools for running SPH and N-body simulations.", + "uid": "github/seqan/lara", + "url": "https://github.com/seqan/lara", + "rel": "/software/repository/github/seqan/lara", + "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", + "description": "LaRA 2: Lagrangian Relaxed structural Alignment", "topics": [ - "SPH", - "nbody", - "opensph", - "simulation" + "bioinformatics", + "rna", + "alignment", + "rna-structure" ] }, { - "uid": "gitlab/fduchate/predihood", - "url": "https://gitlab.com/fduchate/predihood", - "rel": "/software/repository/gitlab/fduchate/predihood", - "avatar": "https://gitlab.comNone", - "description": "", - "topics": [] + "uid": "github/timoast/signac", + "url": "https://github.com/timoast/signac", + "rel": "/software/repository/github/timoast/signac", + "avatar": "https://avatars2.githubusercontent.com/u/4591688?v=4", + "description": "R toolkit for the analysis of single-cell chromatin data", + "topics": [ + "single-cell", + "bioinformatics", + "atac" + ] }, { - "uid": "gitlab/andresruiz/Sparkling", - "url": "https://gitlab.com/andresruiz/Sparkling", - "rel": "/software/repository/gitlab/andresruiz/Sparkling", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58179358/logo.png", - "description": "Spherical cosmic voids finder.", + "uid": "github/cov-ert/gofasta", + "url": "https://github.com/virus-evolution/gofasta", + "rel": "/software/repository/github/cov-ert/gofasta", + "avatar": "https://avatars.githubusercontent.com/u/96189959?v=4", + "description": "provides functions for working on alignments in fasta format.", "topics": [] }, { - "uid": "gitlab/dsbowen/conditional-inference", - "url": "https://gitlab.com/dsbowen/conditional-inference", - "rel": "/software/repository/gitlab/dsbowen/conditional-inference", - "avatar": "https://gitlab.comNone", - "description": null, - "topics": [] + "uid": "github/Starlink/starlink", + "url": "https://github.com/Starlink/starlink", + "rel": "/software/repository/github/Starlink/starlink", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Starlink Software Collection", + "topics": [ + "astronomy" + ] }, { - "uid": "gitlab/pyFBS/pyFBS", - "url": "https://gitlab.com/pyFBS/pyFBS", - "rel": "/software/repository/gitlab/pyFBS/pyFBS", - "avatar": "https://gitlab.comNone", - "description": "A Python package for Frequency Based Substructuring and Transfer Path Analysis", + "uid": "github/Starlink/aspic", + "url": "https://github.com/Starlink/aspic", + "rel": "/software/repository/github/Starlink/aspic", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Starlink Image processing programs from the 1980s", "topics": [ - "3D Viewer", - "FRF synthetisation", - "MCK model", - "System Equivalent Modal Mixing", - "Virtual Point Transformation" + "astronomy", + "fortran" ] }, { - "uid": "gitlab/InspectorCell/inspectorcell", - "url": "https://gitlab.com/InspectorCell/inspectorcell", - "rel": "/software/repository/gitlab/InspectorCell/inspectorcell", - "avatar": "https://gitlab.comNone", - "description": "InspectorCell provides an efficient workflow and graphical interface to generate high-quality training datasets from\r\nhighly multiplexed microscopy images.", - "topics": [] + "uid": "github/Starlink/hds-v5", + "url": "https://github.com/Starlink/hds-v5", + "rel": "/software/repository/github/Starlink/hds-v5", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "HDS API implemented using HDF5", + "topics": [ + "astronomy", + "file-format", + "c" + ] }, { - "uid": "gitlab/magnumpi/magnumpi", - "url": "https://gitlab.com/magnumpi/magnumpi", - "rel": "/software/repository/gitlab/magnumpi/magnumpi", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/8913469/Tom_20Selleck_20as_20Thomas_20Magnum_20P.I._large.jpg", - "description": "Potential Integrator", - "topics": [] + "uid": "github/Starlink/pal", + "url": "https://github.com/Starlink/pal", + "rel": "/software/repository/github/Starlink/pal", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Positional Astronomy Library", + "topics": [ + "astronomy", + "c", + "wcs" + ] }, { - "uid": "gitlab/gpagano/lensinggw", - "url": "https://gitlab.com/gpagano/lensinggw", - "rel": "/software/repository/gitlab/gpagano/lensinggw", - "avatar": "https://gitlab.comNone", - "description": null, + "uid": "github/Starlink/palpy", + "url": "https://github.com/Starlink/palpy", + "rel": "/software/repository/github/Starlink/palpy", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Python interface to the PAL positional astronomy library", "topics": [ - "lensing of gravitational waves" + "python", + "astronomy", + "wcs" ] }, { - "uid": "gitlab/wpettersson/kep_solver", - "url": "https://gitlab.com/wpettersson/kep_solver", - "rel": "/software/repository/gitlab/wpettersson/kep_solver", - "avatar": "https://gitlab.comNone", - "description": "A Python package for reading and solving single instances of kidney exchange problems. ", - "topics": [] + "uid": "github/Starlink/perl-Starlink-Autoastrom", + "url": "https://github.com/Starlink/perl-Starlink-Autoastrom", + "rel": "/software/repository/github/Starlink/perl-Starlink-Autoastrom", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Starlink Auto astrometry software", + "topics": [ + "perl", + "astronomy", + "wcs" + ] }, { - "uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", - "url": "https://gitlab.com/MartinBeseda/sa-oo-vqe-qiskit", - "rel": "/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", - "avatar": "https://gitlab.comNone", - "description": "Qiskit version of SA-OO-VQE", - "topics": [] + "uid": "github/Starlink/ORAC-DR", + "url": "https://github.com/Starlink/ORAC-DR", + "rel": "/software/repository/github/Starlink/ORAC-DR", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "The ORAC-DR astronomy data reduction pipeline", + "topics": [ + "perl", + "orac-dr", + "pipeline-framework", + "astronomy" + ] }, { - "uid": "gitlab/ampere2/metalwalls", - "url": "https://gitlab.com/ampere2/metalwalls", - "rel": "/software/repository/gitlab/ampere2/metalwalls", - "avatar": "https://gitlab.comNone", - "description": "", - "topics": [] + "uid": "github/Starlink/starjava", + "url": "https://github.com/Starlink/starjava", + "rel": "/software/repository/github/Starlink/starjava", + "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", + "description": "Java applications initially developed for the Starlink Project but now developed independently", + "topics": [ + "java", + "astronomy" + ] }, { - "uid": "gitlab/random-quintessence/random-quintessence", - "url": "https://gitlab.com/random-quintessence/random-quintessence", - "rel": "/software/repository/gitlab/random-quintessence/random-quintessence", - "avatar": "https://gitlab.comNone", + "uid": "github/daiqile96/OTTERS_paper", + "url": "https://github.com/daiqile96/OTTERS_paper", + "rel": "/software/repository/github/daiqile96/OTTERS_paper", + "avatar": "https://avatars.githubusercontent.com/u/55097180?v=4", "description": null, "topics": [] }, { - "uid": "gitlab/polmag/P-CORONA", - "url": "https://gitlab.com/polmag/P-CORONA", - "rel": "/software/repository/gitlab/polmag/P-CORONA", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/33519237/out.png", - "description": "P-CORONA is a novel computer program for modeling the intensity and polarization of coronal atomic lines in any given three dimensional (3D) model of the solar corona.", - "topics": [] + "uid": "github/WMD-group/CarrierCapture.jl", + "url": "https://github.com/WMD-group/CarrierCapture.jl", + "rel": "/software/repository/github/WMD-group/CarrierCapture.jl", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "Package to compute trap-assisted electron and hole capture in semiconducting compounds", + "topics": [ + "defects", + "semiconductors", + "electronic-structure", + "materials-design", + "solar-cells" + ] }, { - "uid": "gitlab/polmag/PORTA", - "url": "https://gitlab.com/polmag/PORTA", - "rel": "/software/repository/gitlab/polmag/PORTA", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12210898/porta-logo-bw.png", - "description": "PORTA: A three-dimensional multilevel radiative transfer code for modeling the intensity and polarization of spectral lines with massively parallel computers", + "uid": "github/WMD-group/hybrid-perovskites", + "url": "https://github.com/WMD-group/hybrid-perovskites", + "rel": "/software/repository/github/WMD-group/hybrid-perovskites", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "DFT optimised crystal structures of inorganic and hybrid halide perovskites", "topics": [] }, { - "uid": "gitlab/picos-api/picos", - "url": "https://gitlab.com/picos-api/picos", - "rel": "/software/repository/gitlab/picos-api/picos", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7353603/logo.png", - "description": "A Python interface to conic optimization solvers.", + "uid": "github/WMD-group/SMACT", + "url": "https://github.com/WMD-group/SMACT", + "rel": "/software/repository/github/WMD-group/SMACT", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "Python package to aid materials design", "topics": [ - "math", - "optimization", - "python" + "materials-science", + "materials-informatics", + "materials-screening", + "materials-design", + "machine-learning" ] }, { - "uid": "gitlab/mbiagetti/persistent_homology_lss", - "url": "https://gitlab.com/mbiagetti/persistent_homology_lss", - "rel": "/software/repository/gitlab/mbiagetti/persistent_homology_lss", - "avatar": "https://gitlab.comNone", - "description": "Analyze halo catalogs using persistent homology to constrain cosmological parameters", + "uid": "github/WMD-group/StarryNight", + "url": "https://github.com/WMD-group/StarryNight", + "rel": "/software/repository/github/WMD-group/StarryNight", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "Monte Carlo codes to simulate polar domains in hybrid perovskite solar cells", "topics": [ - "Dark Matter Halos", - "Galaxy Surveys", - "Nbody Simulations", - "Persistent Homology", - "Primordial non-Gaussianity", - "Topological Data Analysis", - "cosmology" + "monte-carlo-codes", + "ferroelectric-domains", + "perovskite", + "photovoltaic", + "monte-carlo", + "dipole-domains", + "recombination", + "semiconductor" ] }, { - "uid": "gitlab/libreumg/dataquier", - "url": "https://gitlab.com/libreumg/dataquier", - "rel": "/software/repository/gitlab/libreumg/dataquier", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/14144828/logo_ship.png", - "description": "", - "topics": [] - }, - { - "uid": "gitlab/uit-sfb/metapipe", - "url": "https://gitlab.com/uit-sfb/metapipe", - "rel": "/software/repository/gitlab/uit-sfb/metapipe", - "avatar": "https://gitlab.comNone", - "description": "Metapipe based on Nextflow", - "topics": [] - }, - { - "uid": "gitlab/andrea-tango/ficos", - "url": "https://gitlab.com/andrea-tango/ficos", - "rel": "/software/repository/gitlab/andrea-tango/ficos", - "avatar": "https://gitlab.comNone", - "description": "", - "topics": [] - }, - { - "uid": "gitlab/vda-lab/snowflake", - "url": "https://gitlab.com/vda-lab/snowflake", - "rel": "/software/repository/gitlab/vda-lab/snowflake", - "avatar": "https://gitlab.comNone", - "description": null, - "topics": [] + "uid": "github/WMD-group/MacroDensity", + "url": "https://github.com/WMD-group/MacroDensity", + "rel": "/software/repository/github/WMD-group/MacroDensity", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "Analyse electron density & potential grids using Python", + "topics": [ + "electrostatic-potential", + "ionisation-potential", + "workfunction", + "density-functional-theory", + "vasp", + "semiconductor-physics" + ] }, { - "uid": "gitlab/eduardo-vitral/balrogo", - "url": "https://gitlab.com/eduardo-vitral/balrogo", - "rel": "/software/repository/gitlab/eduardo-vitral/balrogo", - "avatar": "https://gitlab.com/eduardo-vitral/balrogo/-/avatar", - "description": "Bayesian Astrometric Likelihood Recovery of Galactic Objects", - "topics": [] + "uid": "github/WMD-group/Eris", + "url": "https://github.com/WMD-group/Eris", + "rel": "/software/repository/github/WMD-group/Eris", + "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", + "description": "Monte Carlo codes to simulate cation disorder in kesterite semiconductors", + "topics": [ + "monte-carlo", + "photovoltaic", + "materials", + "thermodynamics", + "physics", + "semiconductor", + "defects" + ] }, { - "uid": "gitlab/ags-data-format-wg/ags-python-library", - "url": "https://gitlab.com/ags-data-format-wg/ags-python-library", - "rel": "/software/repository/gitlab/ags-data-format-wg/ags-python-library", - "avatar": "https://gitlab.comNone", - "description": "A library to read and write AGS files using Pandas DataFrames", - "topics": [] + "uid": "github/adbar/htmldate", + "url": "https://github.com/adbar/htmldate", + "rel": "/software/repository/github/adbar/htmldate", + "avatar": "https://avatars0.githubusercontent.com/u/2125866?v=4", + "description": "Fast and robust date extraction from web pages, from the command-line or within Python", + "topics": [ + "metadata-extraction", + "date-parser", + "html-parsing", + "entity-extraction", + "natural-language-processing", + "nlp", + "web-scraping", + "webscraping", + "date", + "datetime", + "metadata", + "information-extraction" + ] }, { - "uid": "gitlab/aceteam.kaist/ACE-Molecule", - "url": "https://gitlab.com/aceteam.kaist/ACE-Molecule", - "rel": "/software/repository/gitlab/aceteam.kaist/ACE-Molecule", - "avatar": "https://gitlab.comNone", - "description": "GitLab repository for ACE-Molecule.", - "topics": [] + "uid": "github/dansarie/sboxgates", + "url": "https://github.com/dansarie/sboxgates", + "rel": "/software/repository/github/dansarie/sboxgates", + "avatar": "https://avatars.githubusercontent.com/u/16786778?v=4", + "description": "Program for finding low gate count implementations of S-boxes.", + "topics": [ + "cryptanalysis", + "mpi", + "logic-circuit", + "cuda" + ] }, { - "uid": "gitlab/ztzou/phydl", - "url": "https://gitlab.com/ztzou/phydl", - "rel": "/software/repository/gitlab/ztzou/phydl", - "avatar": "https://gitlab.comNone", - "description": "Phylogenetics by Deep Learning. A residual neural network for inference of quartet phylogenetic tree topology.", - "topics": [] + "uid": "github/cbirdferrer/collatrix", + "url": "https://github.com/cbirdferrer/collatrix", + "rel": "/software/repository/github/cbirdferrer/collatrix", + "avatar": "https://avatars1.githubusercontent.com/u/30982700?v=4", + "description": "this tool collates the outputs of the MorphoMetriX photogrammetry tool", + "topics": [ + "length-measurement", + "altitude-calibration", + "body-volume", + "whales", + "photogrammetry", + "gui-application", + "pyqt5" + ] }, { - "uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", - "url": "https://gitlab.com/morikawa-lab-osakau/vibir-parallel-compute", - "rel": "/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58824042/logo.png", - "description": "A HPC-ready parallelized implementation of Vibration and Infrared computations from DFT simulations.\r\n\r\nhttps://morikawa-lab-osakau.gitlab.io/vibir-parallel-compute", - "topics": [] + "uid": "github/fmicompbio/ez_zarr", + "url": "https://github.com/fmicompbio/ez_zarr", + "rel": "/software/repository/github/fmicompbio/ez_zarr", + "avatar": "https://avatars.githubusercontent.com/u/35133054?v=4", + "description": "GIve easy, high-level access to ome-zarr fileset", + "topics": [ + "ome-zarr" + ] }, { - "uid": "gitlab/permafrostnet/teaspoon", - "url": "https://gitlab.com/permafrostnet/teaspoon", - "rel": "/software/repository/gitlab/permafrostnet/teaspoon", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/35916406/teaspooncolor_p.png", - "description": "Python for permafrost temperature data", + "uid": "github/OpenEnergyPlatform/open-MaStR", + "url": "https://github.com/OpenEnergyPlatform/open-MaStR", + "rel": "/software/repository/github/OpenEnergyPlatform/open-MaStR", + "avatar": "https://avatars.githubusercontent.com/u/37101913?v=4", + "description": "A collaborative software to download the energy database Marktstammdatenregister (MaStR)", "topics": [ + "open-energy-family", + "oep", + "marktstammdatenregister", + "python", + "energy", + "energy-data", "dataset", - "earth science", - "geography" + "datasets", + "solar" ] }, { - "uid": "gitlab/eleonoraalei/exo-mercat-gui", - "url": "https://gitlab.com/eleonoraalei/exo-mercat-gui", - "rel": "/software/repository/gitlab/eleonoraalei/exo-mercat-gui", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12601405/Untitled-1.png", - "description": "The Graphical User Interface of Exo-MerCat.", - "topics": [] - }, - { - "uid": "gitlab/gmamon/MAMPOSSt", - "url": "https://gitlab.com/gmamon/MAMPOSSt", - "rel": "/software/repository/gitlab/gmamon/MAMPOSSt", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/6066861/MAMPOSSt_logo.png", - "description": null, + "uid": "github/pyplati/platipy", + "url": "https://github.com/pyplati/platipy", + "rel": "/software/repository/github/pyplati/platipy", + "avatar": "https://avatars.githubusercontent.com/u/71683675?v=4", + "description": "Processing Library and Analysis Toolkit for Medical Imaging in Python", "topics": [ - "Mass/orbit modeling" + "image-analysis", + "medical-imaging", + "python", + "registration", + "segmentation", + "visualization" ] }, { - "uid": "gitlab/esa/pyxel", - "url": "https://gitlab.com/esa/pyxel", - "rel": "/software/repository/gitlab/esa/pyxel", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/10410719/square_logo.png", - "description": "Pyxel is a general detector simulation framework. An easy-to-use framework that can simulate a variety of imaging detector effects combined on images (e.g. radiation and optical effects, noises) made by CCD or CMOS-based detectors.", + "uid": "github/rvandewater/ReciPies", + "url": "https://github.com/rvandewater/ReciPies", + "rel": "/software/repository/github/rvandewater/ReciPies", + "avatar": "https://avatars.githubusercontent.com/u/23501069?v=4", + "description": "\ud83e\udd67 Easily define reproducible preprocessing steps for ML on Polars and Pandas DataFrames. ", "topics": [ - "astronomy", - "camera", - "ccd", - "cmos", - "detector", - "imaging", - "mct", - "pixel", + "tidymodels", + "data-science", + "pandas", "python", - "simulation" + "scikit-learn", + "polars", + "machine-learning" ] }, { - "uid": "gitlab/habermann_lab/phasik", - "url": "https://gitlab.com/habermann_lab/phasik", - "rel": "/software/repository/gitlab/habermann_lab/phasik", - "avatar": "https://gitlab.comNone", - "description": "Scientific tools for extracting cyclic data via hierarchical clustering", + "uid": "github/kokron/anzu", + "url": "https://github.com/kokron/anzu", + "rel": "/software/repository/github/kokron/anzu", + "avatar": "https://avatars.githubusercontent.com/u/10699475?v=4", + "description": "Measurements and emulation of Lagrangian bias models for clustering and lensing cross-correlations.", "topics": [] }, { - "uid": "gitlab/jtagusari/hrisk-noisemodelling", - "url": "https://gitlab.com/jtagusari/hrisk-noisemodelling", - "rel": "/software/repository/gitlab/jtagusari/hrisk-noisemodelling", - "avatar": "https://gitlab.comNone", + "uid": "github/kokron/skyLine", + "url": "https://github.com/kokron/skyLine", + "rel": "/software/repository/github/kokron/skyLine", + "avatar": "https://avatars.githubusercontent.com/u/10699475?v=4", "description": null, "topics": [] }, { - "uid": "gitlab/ProjectRHEA/flowsolverrhea", - "url": "https://gitlab.com/ProjectRHEA/flowsolverrhea", - "rel": "/software/repository/gitlab/ProjectRHEA/flowsolverrhea", - "avatar": "https://gitlab.comNone", - "description": "RHEA: an open-source Reproducible and Hybrid-architecture flow solver Engineered for Academia", + "uid": "github/CSi-Studio/G-Aligner", + "url": "https://github.com/CSi-Studio/G-Aligner", + "rel": "/software/repository/github/CSi-Studio/G-Aligner", + "avatar": "https://avatars.githubusercontent.com/u/50073614?v=4", + "description": "G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics", "topics": [] }, { - "uid": "gitlab/LouisLab/PiVR", - "url": "https://gitlab.com/LouisLab/pivr", - "rel": "/software/repository/gitlab/LouisLab/PiVR", - "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/9212004/PiVR_logo.png", - "description": "PiVR has been developed to track a variety of animals in real time and present them with light stimuli. Manual can be found at www.PiVR.org, scientific publication at https://doi.org/10.1371/journal.pbio.3000712\r\n", + "uid": "github/EdanRein/pyPplusS", + "url": "https://github.com/EdanRein/pyPplusS", + "rel": "/software/repository/github/EdanRein/pyPplusS", + "avatar": "https://avatars.githubusercontent.com/u/37420656?v=4", + "description": "pyPplusS code package for modeling exoplanets with rings", "topics": [] }, { - "uid": "gitlab/qc-devs/aqcnes", - "url": "https://gitlab.com/qc-devs/aqcnes", - "rel": "/software/repository/gitlab/qc-devs/aqcnes", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/60711361/ThermalExpansion_Subdomain.png", - "description": "Mirror of https://gitlab.ethz.ch/mechanics-and-materials/aqcnes/", + "uid": "github/yair111/AnalyticLC", + "url": "https://github.com/yair111/AnalyticLC", + "rel": "/software/repository/github/yair111/AnalyticLC", + "avatar": "https://avatars.githubusercontent.com/u/93904333?v=4", + "description": null, "topics": [] }, { - "uid": "gitlab/programgreg/tagginglatencyestimator", - "url": "https://gitlab.com/programgreg/tagginglatencyestimator", - "rel": "/software/repository/gitlab/programgreg/tagginglatencyestimator", - "avatar": "https://gitlab.comNone", - "description": "Software to estimate the latency of the tagging process.", + "uid": "github/gymreklab/GangSTR", + "url": "https://github.com/gymreklab/GangSTR", + "rel": "/software/repository/github/gymreklab/GangSTR", + "avatar": "https://avatars.githubusercontent.com/u/19779699?v=4", + "description": "A tool for profiling long STRs from short reads", "topics": [] }, { - "uid": "gitlab/burstcube/mhealpy", - "url": "https://gitlab.com/burstcube/mhealpy", - "rel": "/software/repository/gitlab/burstcube/mhealpy", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/21249835/Screen_Shot_2020-09-20_at_3.59.09_PM.png", - "description": null, + "uid": "github/gymreklab/chips", + "url": "https://github.com/gymreklab/chips", + "rel": "/software/repository/github/gymreklab/chips", + "avatar": "https://avatars.githubusercontent.com/u/19779699?v=4", + "description": "Simulation tool for ChIP- and other -seq experiments", "topics": [] }, { - "uid": "gitlab/EliseLei/easychem", - "url": "https://gitlab.com/EliseLei/easychem", - "rel": "/software/repository/gitlab/EliseLei/easychem", - "avatar": "https://gitlab.com/uploads/-/system/project/avatar/39021845/easyCHEM_logo_light.png", - "description": null, + "uid": "github/blobtoolkit/viewer", + "url": "https://github.com/blobtoolkit/viewer", + "rel": "/software/repository/github/blobtoolkit/viewer", + "avatar": "https://avatars.githubusercontent.com/u/29755752?v=4", + "description": "[Archived] BlobToolKit API and viewer code", "topics": [] }, { - "uid": "github/lsds/Neptune", - "url": "https://github.com/lsds/Neptune", - "rel": "/software/repository/github/lsds/Neptune", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Neptune Execution Framework for Stream/Batch Spark Applications", + "uid": "github/kristiantcho/flashcurve", + "url": "https://github.com/kristiantcho/flashcurve", + "rel": "/software/repository/github/kristiantcho/flashcurve", + "avatar": "https://avatars.githubusercontent.com/u/41946704?v=4", + "description": "A python tool for the fast generation of adaptive-binning for lightcurves with Fermi-LAT gamma-ray data using machine learning", "topics": [] }, { - "uid": "github/lsds/Saber", - "url": "https://github.com/lsds/Saber", - "rel": "/software/repository/github/lsds/Saber", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Window-Based Hybrid CPU/GPU Stream Processing Engine", + "uid": "github/miRTop/mirtop", + "url": "https://github.com/miRTop/mirtop", + "rel": "/software/repository/github/miRTop/mirtop", + "avatar": "https://avatars.githubusercontent.com/u/15463928?v=4", + "description": "command lines tool to annotate miRNAs with a standard mirna/isomir naming", "topics": [ - "stream-processing", - "hybrid", - "multicore", - "gpu", - "high-throughput", - "saber", - "stream", - "streaming-data", - "streaming", - "sliding-windows", - "multicore-cpu" + "mirna", + "isomirs", + "formatter", + "gff", + "smallrna-seq" ] }, { - "uid": "github/lsds/KungFu", - "url": "https://github.com/lsds/KungFu", - "rel": "/software/repository/github/lsds/KungFu", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Fast and Adaptive Distributed Machine Learning for TensorFlow, PyTorch and MindSpore.", + "uid": "github/ejikeugba/serp", + "url": "https://github.com/ejikeugba/serp", + "rel": "/software/repository/github/ejikeugba/serp", + "avatar": "https://avatars.githubusercontent.com/u/32841384?v=4", + "description": "Smooth Effects on Response Penalty for CLM", + "topics": [] + }, + { + "uid": "github/ejikeugba/gofcat", + "url": "https://github.com/ejikeugba/gofcat", + "rel": "/software/repository/github/ejikeugba/gofcat", + "avatar": "https://avatars.githubusercontent.com/u/32841384?v=4", + "description": "Goodness-of-fit tests for categorical response models", "topics": [ - "tensorflow", - "keras", - "distributed-training", - "distributed-systems" + "hosmer-lemeshow-test", + "lipsitz-test", + "pulkstenis-robinson-test", + "brant-test", + "likelihood-ratio-test", + "proportional-odds-test", + "pseudo-r2", + "brier-scores", + "log-loss-score-metric", + "misclassification", + "logistic-regression", + "ordinal-regression" ] }, { - "uid": "github/lsds/sgx-lkl", - "url": "https://github.com/lsds/sgx-lkl", - "rel": "/software/repository/github/lsds/sgx-lkl", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "SGX-LKL Library OS for running Linux applications inside of Intel SGX enclaves", + "uid": "github/m-shahbaz-kharal/LiGuard-JOSS", + "url": "https://github.com/m-shahbaz-kharal/LiGuard-JOSS", + "rel": "/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", + "avatar": "https://avatars.githubusercontent.com/u/9637550?v=4", + "description": "A research-purposed, GUI-powered, Python-based framework that allows easy development of dynamic point-cloud (and accompanying image) data processing pipelines.", "topics": [ - "sgx", - "trusted-execution", - "linux", - "java", - "jvm", - "enclave", - "javascipt" + "bulk-operation", + "camera", + "image-processing", + "image-visualization", + "lidar", + "lidar-camera-fusion", + "open3d", + "opencv", + "point-cloud-processing", + "point-cloud-visualization", + "python" ] }, { - "uid": "github/lsds/LightSaber", - "url": "https://github.com/lsds/LightSaber", - "rel": "/software/repository/github/lsds/LightSaber", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Multi-core Window-Based Stream Processing Engine", + "uid": "github/danhey/maelstrom", + "url": "https://github.com/danhey/maelstrom", + "rel": "/software/repository/github/danhey/maelstrom", + "avatar": "https://avatars0.githubusercontent.com/u/38233719?v=4", + "description": "Forward modelling of pulsating stars in binaries", "topics": [ - "llvm", - "incremental-computation", - "aggregation", - "stream-processing", - "sliding-windows", - "numa", - "multi-core", - "cpp", - "rdma", - "ssd", - "libaio", - "compression" + "asteroseismology", + "mcmc", + "bayesian-inference", + "pymc3", + "astronomy", + "astrophysics", + "binaries" ] }, { - "uid": "github/lsds/TaLoS", - "url": "https://github.com/lsds/TaLoS", - "rel": "/software/repository/github/lsds/TaLoS", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Efficient TLS termination inside Intel SGX enclaves for existing applications", - "topics": [ - "enclave", - "sgx-enclave", - "tls-library", - "intel-sgx", - "tls-connection", - "talos", - "libressl" - ] + "uid": "github/danhey/echelle", + "url": "https://github.com/danhey/echelle", + "rel": "/software/repository/github/danhey/echelle", + "avatar": "https://avatars.githubusercontent.com/u/38233719?v=4", + "description": "Dynamic echelle diagrams for asteroseismology", + "topics": [] }, { - "uid": "github/lsds/Crossbow", - "url": "https://github.com/lsds/Crossbow", - "rel": "/software/repository/github/lsds/Crossbow", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Crossbow: A Multi-GPU Deep Learning System for Training with Small Batch Sizes", - "topics": [ - "deep-learning", - "training", - "machine-learning", - "gpu-acceleration" - ] + "uid": "github/david-deboer/radiobear", + "url": "https://github.com/david-deboer/radiobear", + "rel": "/software/repository/github/david-deboer/radiobear", + "avatar": "https://avatars.githubusercontent.com/u/4715126?v=4", + "description": "radioBEAR: radio - BErkeley Atmospheric Radiative transfer", + "topics": [] }, { - "uid": "github/lsds/SEEP", - "url": "https://github.com/lsds/SEEP", - "rel": "/software/repository/github/lsds/SEEP", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Cluster computing using Stateful Dataflow Graphs", + "uid": "github/astrorama/sourcextractorplusplus", + "url": "https://github.com/astrorama/SourceXtractorPlusPlus", + "rel": "/software/repository/github/astrorama/sourcextractorplusplus", + "avatar": "https://avatars.githubusercontent.com/u/48352705?v=4", + "description": "SourceXtractor++, the next generation SExtractor", "topics": [ - "dataflow-programming", - "stateful", - "sdg", - "cluster-computing" + "astronomy", + "c-plus-plus", + "science", + "model-fitting" ] }, { - "uid": "github/lsds/faasm", - "url": "https://github.com/faasm/faasm", - "rel": "/software/repository/github/lsds/faasm", - "avatar": "https://avatars.githubusercontent.com/u/72010129?v=4", - "description": "High-performance stateful serverless runtime based on WebAssembly", - "topics": [ - "serverless", - "webassembly", - "faas", - "kubernetes", - "wasi", - "knative", - "cpp", - "openmp", - "mpi" - ] + "uid": "github/nliulab/HRnV-Calc", + "url": "https://github.com/nliulab/HRnV-Calc", + "rel": "/software/repository/github/nliulab/HRnV-Calc", + "avatar": "https://avatars.githubusercontent.com/u/53963109?v=4", + "description": "HRnV-Calc software for heart rate n-variability and heart rate variability analysis", + "topics": [] }, { - "uid": "github/lsds/Teechain", - "url": "https://github.com/lsds/Teechain", - "rel": "/software/repository/github/lsds/Teechain", - "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", - "description": "Teechain: A Secure Payment Network with Asynchronous Blockchain Access", + "uid": "github/c-white/blacklight", + "url": "https://github.com/c-white/blacklight", + "rel": "/software/repository/github/c-white/blacklight", + "avatar": "https://avatars.githubusercontent.com/u/2496675?v=4", + "description": "GR ray tracing code for post-processing Athena++ simulations", "topics": [] }, { - "uid": "github/jcombs1/blasr", - "url": "https://github.com/jcombs1/blasr", - "rel": "/software/repository/github/jcombs1/blasr", - "avatar": "https://avatars.githubusercontent.com/u/3442275?v=4", - "description": "BLASR: The PacBio\u00ae long read aligner", + "uid": "github/JieweiHuang/Coport", + "url": "https://github.com/JieweiHuang/Coport", + "rel": "/software/repository/github/JieweiHuang/Coport", + "avatar": "https://avatars.githubusercontent.com/u/175380276?v=4", + "description": "A Covariant Polarized Radiative Transfer Code", "topics": [] }, { - "uid": "github/gheald/rmclean", - "url": "https://github.com/gheald/rmclean", - "rel": "/software/repository/github/gheald/rmclean", - "avatar": "https://avatars.githubusercontent.com/u/12065292?v=4", - "description": "RM-CLEAN for miriad", + "uid": "github/iAART/aart", + "url": "https://github.com/iAART/aart", + "rel": "/software/repository/github/iAART/aart", + "avatar": "https://avatars.githubusercontent.com/u/104873899?v=4", + "description": "An adaptive analytical ray-tracing code to study black hole photon rings", "topics": [] }, { - "uid": "github/cov-ert/gofasta", - "url": "https://github.com/virus-evolution/gofasta", - "rel": "/software/repository/github/cov-ert/gofasta", - "avatar": "https://avatars.githubusercontent.com/u/96189959?v=4", - "description": "provides functions for working on alignments in fasta format.", - "topics": [] + "uid": "github/snad-space/coniferest", + "url": "https://github.com/snad-space/coniferest", + "rel": "/software/repository/github/snad-space/coniferest", + "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", + "description": null, + "topics": [ + "anomaly-detection", + "machine-learning" + ] }, { - "uid": "github/V-Bernal/GeneNetTools", - "url": "https://github.com/V-Bernal/GeneNetTools", - "rel": "/software/repository/github/V-Bernal/GeneNetTools", - "avatar": "https://avatars.githubusercontent.com/u/44974039?v=4", - "description": "R package for Gaussian graphical models with (Ledoit Wolf) shrinkage ", + "uid": "github/snad-space/ztf-viewer", + "url": "https://github.com/snad-space/ztf-viewer", + "rel": "/software/repository/github/snad-space/ztf-viewer", + "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", + "description": "ZTF data releases light curve viewer", "topics": [] }, { - "uid": "github/tanhevg/GpABC.jl", - "url": "https://github.com/tanhevg/GpABC.jl", - "rel": "/software/repository/github/tanhevg/GpABC.jl", - "avatar": "https://avatars.githubusercontent.com/u/5775458?v=4", - "description": null, + "uid": "github/snad-space/zwad", + "url": "https://github.com/snad-space/zwad", + "rel": "/software/repository/github/snad-space/zwad", + "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", + "description": "ZTF anomaly detection", "topics": [] }, { - "uid": "github/ugovaretto/molekel", - "url": "https://github.com/ugovaretto/molekel", - "rel": "/software/repository/github/ugovaretto/molekel", - "avatar": "https://avatars.githubusercontent.com/u/1543376?v=4", - "description": "molekel", + "uid": "github/klevis-a/kinematics-vis", + "url": "https://github.com/klevis-a/kinematics-vis", + "rel": "/software/repository/github/klevis-a/kinematics-vis", + "avatar": "https://avatars.githubusercontent.com/u/22669455?v=4", + "description": "JavaScript application for visualizing and analyzing shoulder joint kinematics", "topics": [] }, { - "uid": "github/blackjax-devs/blackjax", - "url": "https://github.com/blackjax-devs/blackjax", - "rel": "/software/repository/github/blackjax-devs/blackjax", - "avatar": "https://avatars.githubusercontent.com/u/75721977?v=4", - "description": "BlackJAX is a sampling library designed for ease of use, speed and modularity.", + "uid": "github/xcompact3d/Incompact3d", + "url": "https://github.com/xcompact3d/Incompact3d", + "rel": "/software/repository/github/xcompact3d/Incompact3d", + "avatar": "https://avatars.githubusercontent.com/u/37588006?v=4", + "description": "New version of our solver for the incompressible Navier-Stokes equations", "topics": [ - "probabilistic-programming", - "bayesian-inference", - "sampling-methods", - "hamiltonian-monte-carlo" + "navier-stokes", + "computational-fluid-dynamics", + "cfd", + "direct-numerical-simulation", + "large-eddy-simulation" ] }, { - "uid": "github/gavinsimpson/gratia", - "url": "https://github.com/gavinsimpson/gratia", - "rel": "/software/repository/github/gavinsimpson/gratia", - "avatar": "https://avatars.githubusercontent.com/u/514696?v=4", - "description": "ggplot-based graphics and useful functions for GAMs fitted using the mgcv package", + "uid": "github/chenwuperth/rgz_rcnn", + "url": "https://github.com/chenwuperth/rgz_rcnn", + "rel": "/software/repository/github/chenwuperth/rgz_rcnn", + "avatar": "https://avatars.githubusercontent.com/u/2968262?v=4", + "description": "ClaRAN: A deep learning classifier for radio morphologies", "topics": [ - "r-package", - "generalized-additive-models", - "ggplot2", - "mgcv", - "gam", - "glm", - "lm", - "random-effects", - "smoothing", - "r" + "radio-sources", + "radio-morphologies", + "machine-learning", + "morphology", + "deep-learning", + "computer-vision", + "faster-rcnn" ] }, { - "uid": "github/arkavo/CUDA-METRO", - "url": "https://github.com/arkavo/CUDA-METRO", - "rel": "/software/repository/github/arkavo/CUDA-METRO", - "avatar": "https://avatars.githubusercontent.com/u/16555024?v=4", - "description": "Based on the pyCUDA enabled Metropolis MCMC for spintronics simulations.", - "topics": [] - }, - { - "uid": "github/radifar/PyPLIF-HIPPOS", - "url": "https://github.com/radifar/PyPLIF-HIPPOS", - "rel": "/software/repository/github/radifar/PyPLIF-HIPPOS", - "avatar": "https://avatars.githubusercontent.com/u/11450417?v=4", - "description": "HIPPOS Is PyPLIF On Steroids. A Molecular Interaction Fingerprinting Tool for Docking Results of Autodock Vina and PLANTS", + "uid": "github/YosefLab/scvi-tools", + "url": "https://github.com/scverse/scvi-tools", + "rel": "/software/repository/github/YosefLab/scvi-tools", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "Deep probabilistic analysis of single-cell omics data", "topics": [ - "molecular-docking", - "autodock-vina", - "interaction-fingerprinting", - "virtual-screening", - "drug-discovery" + "scrna-seq", + "variational-bayes", + "variational-autoencoder", + "cite-seq", + "single-cell-genomics", + "single-cell-rna-seq", + "deep-generative-model", + "human-cell-atlas", + "scverse", + "deep-learning" ] }, { - "uid": "github/spexod/iSLAT", - "url": "https://github.com/spexod/iSLAT", - "rel": "/software/repository/github/spexod/iSLAT", - "avatar": "https://avatars.githubusercontent.com/u/107328517?v=4", - "description": null, + "uid": "github/PeterBartram/TES", + "url": "https://github.com/PeterBartram/TES", + "rel": "/software/repository/github/PeterBartram/TES", + "avatar": "https://avatars.githubusercontent.com/u/22742253?v=4", + "description": "Terrestrial Exoplanet Simulator public repository", "topics": [] }, { - "uid": "github/lkmklsmn/DrivAER", - "url": "https://github.com/lkmklsmn/DrivAER", - "rel": "/software/repository/github/lkmklsmn/DrivAER", - "avatar": "https://avatars0.githubusercontent.com/u/11682947?v=4", - "description": "DrivAER: Identification of Driving transcriptional programs using AutoEncoder based Relevance scores", + "uid": "github/sherpa-deproject/deproject", + "url": "https://github.com/sherpa-deproject/deproject", + "rel": "/software/repository/github/sherpa-deproject/deproject", + "avatar": "https://avatars.githubusercontent.com/u/47479958?v=4", + "description": "CIAO Sherpa extension package for deprojection of two-dimensional annular X-ray spectra to recover the three-dimensional source properties.", "topics": [] }, { - "uid": "github/uab-cgds-worthey/quac", - "url": "https://github.com/uab-cgds-worthey/quac", - "rel": "/software/repository/github/uab-cgds-worthey/quac", - "avatar": "https://avatars.githubusercontent.com/u/110498780?v=4", - "description": "\ud83e\udd86 Quality Control of WGS and exome samples \ud83e\udd86", + "uid": "github/adithirgis/pollucheck", + "url": "https://github.com/adithirgis/pollucheck", + "rel": "/software/repository/github/adithirgis/pollucheck", + "avatar": "https://avatars.githubusercontent.com/u/63432077?v=4", + "description": "This application helps exploring the open source air quality data.", + "topics": [] + }, + { + "uid": "github/1313e/PRISM", + "url": "https://github.com/1313e/PRISM", + "rel": "/software/repository/github/1313e/PRISM", + "avatar": "https://avatars.githubusercontent.com/u/30159027?v=4", + "description": "An alternative to MCMC for rapid analysis of models", "topics": [ - "pipeline" + "model", + "analysis-pipeline", + "model-analysis", + "emulator", + "regression", + "python3", + "python" ] }, { - "uid": "github/FireflySpectra/firefly_release", - "url": "https://github.com/FireflySpectra/firefly_release", - "rel": "/software/repository/github/FireflySpectra/firefly_release", - "avatar": "https://avatars.githubusercontent.com/u/32545453?v=4", - "description": "Firefly, a full spectral fitting code. This repository contains the main code and examples on how to use it.", + "uid": "github/1313e/CMasher", + "url": "https://github.com/1313e/CMasher", + "rel": "/software/repository/github/1313e/CMasher", + "avatar": "https://avatars.githubusercontent.com/u/30159027?v=4", + "description": "Scientific colormaps for making accessible, informative and 'cmashing' plots", + "topics": [ + "python", + "colormaps", + "data-visualization", + "plotting", + "matplotlib", + "utility-functions" + ] + }, + { + "uid": "github/SciLifeLab/TIDDIT", + "url": "https://github.com/SciLifeLab/TIDDIT", + "rel": "/software/repository/github/SciLifeLab/TIDDIT", + "avatar": "https://avatars.githubusercontent.com/u/713611?v=4", + "description": "TIDDIT - structural variant calling", "topics": [] }, { - "uid": "github/GooglingTheCancerGenome/sv-channels", - "url": "https://github.com/GooglingTheCancerGenome/sv-channels", - "rel": "/software/repository/github/GooglingTheCancerGenome/sv-channels", - "avatar": "https://avatars.githubusercontent.com/u/27248218?v=4", - "description": "Deep learning-based structural variant caller", + "uid": "github/najoshi/sickle", + "url": "https://github.com/najoshi/sickle", + "rel": "/software/repository/github/najoshi/sickle", + "avatar": "https://avatars.githubusercontent.com/u/607905?v=4", + "description": "Windowed Adaptive Trimming for fastq files using quality", "topics": [] }, { - "uid": "github/GooglingTheCancerGenome/sv-callers", - "url": "https://github.com/GooglingTheCancerGenome/sv-callers", - "rel": "/software/repository/github/GooglingTheCancerGenome/sv-callers", - "avatar": "https://avatars1.githubusercontent.com/u/27248218?v=4", - "description": "Snakemake-based workflow for detecting structural variants in WGS data", + "uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", + "url": "https://github.com/BlackHolePerturbationToolkit/KerrGeoPy", + "rel": "/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", + "avatar": "https://avatars.githubusercontent.com/u/28654934?v=4", + "description": "Python library for computing properties of stable and plunging orbits around a spinning black hole", + "topics": [] + }, + { + "uid": "github/meenakshi-kushwaha/mmaqshiny", + "url": "https://github.com/meenakshi-kushwaha/mmaqshiny", + "rel": "/software/repository/github/meenakshi-kushwaha/mmaqshiny", + "avatar": "https://avatars1.githubusercontent.com/u/52627451?v=4", + "description": "R-Shiny package to explore Air-Pollution Mobile Monitoring data ", + "topics": [] + }, + { + "uid": "github/asntech/intervene", + "url": "https://github.com/asntech/intervene", + "rel": "/software/repository/github/asntech/intervene", + "avatar": "https://avatars.githubusercontent.com/u/3965104?v=4", + "description": "Intervene: a tool for intersection and visualization of multiple genomic region and gene sets", "topics": [ - "bioinformatics", - "structural-variants", - "sv-calling", - "germline-variants", - "somatic-variants", - "cancer-genomics", - "wgs", - "workflow", - "snakemake", - "hpc-applications" + "visualization", + "genome-analysis", + "dna-sequences", + "bedtools", + "pyton", + "venn-diagram", + "heatmaps", + "intersection" ] }, { - "uid": "github/GooglingTheCancerGenome/sv-gen", - "url": "https://github.com/GooglingTheCancerGenome/sv-gen", - "rel": "/software/repository/github/GooglingTheCancerGenome/sv-gen", - "avatar": "https://avatars1.githubusercontent.com/u/27248218?v=4", - "description": "Snakemake-based workflow for generating artificial genomes with structural variants", + "uid": "github/ProSolo/prosolo", + "url": "https://github.com/ProSolo/prosolo", + "rel": "/software/repository/github/ProSolo/prosolo", + "avatar": "https://avatars.githubusercontent.com/u/40427071?v=4", + "description": "ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.", + "topics": [] + }, + { + "uid": "github/XuhanLiu/DrugEx", + "url": "https://github.com/XuhanLiu/DrugEx", + "rel": "/software/repository/github/XuhanLiu/DrugEx", + "avatar": "https://avatars.githubusercontent.com/u/15225021?v=4", + "description": "Deep learning toolkit for Drug Design with Pareto-based Multi-Objective optimization in Polypharmacology", "topics": [ - "bioinformatics", - "structural-variants", - "cancer-genomics", - "wgs", - "simulator", - "workflow", - "snakemake", - "hpc-applications" + "deep-learning", + "multi-objective-optimization", + "graph-transformer", + "reinforcement-learning", + "cheminformatics" ] }, { - "uid": "github/rroyaute/h2_breeders_equation", - "url": "https://github.com/rroyaute/h2_breeders_equation", - "rel": "/software/repository/github/rroyaute/h2_breeders_equation", - "avatar": "https://avatars.githubusercontent.com/u/54351958?v=4", - "description": "Shiny application for interactive Evolution teaching activity on heritability and making use of the Breeder's equation", + "uid": "github/lucaskorol21/GO-RXR", + "url": "https://github.com/lucaskorol21/GO-RXR", + "rel": "/software/repository/github/lucaskorol21/GO-RXR", + "avatar": "https://avatars.githubusercontent.com/u/74730122?v=4", + "description": null, "topics": [] }, { - "uid": "github/BD2KGenomics/toil", - "url": "https://github.com/DataBiosphere/toil", - "rel": "/software/repository/github/BD2KGenomics/toil", - "avatar": "https://avatars.githubusercontent.com/u/32805087?v=4", - "description": "A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.", + "uid": "github/muctadir/lama", + "url": "https://github.com/muctadir/lama", + "rel": "/software/repository/github/muctadir/lama", + "avatar": "https://avatars.githubusercontent.com/u/2332130?v=4", + "description": "LaMa, short for Labelling Machine, is an web application developed for aiding in thematic analysis of qualitative data. ", "topics": [ - "cwl", + "angular", + "docker", "python", - "mesos", - "slurm", - "gridengine", - "workflow", - "pipeline", - "aws", - "common-workflow-language", - "kubernetes" + "qualitative-research", + "thematic-analysis", + "qualitative-analysis", + "text-labeling" ] }, { - "uid": "github/BMCV/giatools", - "url": "https://github.com/BMCV/giatools", - "rel": "/software/repository/github/BMCV/giatools", - "avatar": "https://avatars.githubusercontent.com/u/24603562?v=4", - "description": "Tools required for Galaxy Image Analysis", - "topics": [] + "uid": "github/ECSHackWeek/impedance.py", + "url": "https://github.com/ECSHackWeek/impedance.py", + "rel": "/software/repository/github/ECSHackWeek/impedance.py", + "avatar": "https://avatars2.githubusercontent.com/u/32744210?v=4", + "description": "A Python package for working with electrochemical impedance data", + "topics": [ + "impedance", + "lithium-ion", + "battery", + "electrochemistry", + "fuel-cell", + "corrosion" + ] }, { - "uid": "github/BMCV/galaxy-image-analysis", - "url": "https://github.com/BMCV/galaxy-image-analysis", - "rel": "/software/repository/github/BMCV/galaxy-image-analysis", - "avatar": "https://avatars.githubusercontent.com/u/24603562?v=4", - "description": "Galaxy tools for image analysis", + "uid": "github/mscroggs/symfem", + "url": "https://github.com/mscroggs/symfem", + "rel": "/software/repository/github/mscroggs/symfem", + "avatar": "https://avatars.githubusercontent.com/u/9850599?v=4", + "description": "A symbolic finite element definition library", "topics": [ - "usegalaxy", - "usegalaxy-eu" + "finite-elements", + "symbolic-algebra" ] }, { - "uid": "github/nlesc-sherlock/emma", - "url": "https://github.com/nlesc-sherlock/emma", - "rel": "/software/repository/github/nlesc-sherlock/emma", - "avatar": "https://avatars1.githubusercontent.com/u/15137410?v=4", - "description": "Ansible playbook to create a cluster with GlusterFS, Docker, Spark and JupyterHub services", + "uid": "github/hjozwiak-umk/bigos_h2he", + "url": "https://github.com/hjozwiak-umk/bigos_h2he", + "rel": "/software/repository/github/hjozwiak-umk/bigos_h2he", + "avatar": "https://avatars.githubusercontent.com/u/70630776?v=4", + "description": "the SCATTERING code from the BIGOS package adjusted for diatom-atom calculations", "topics": [] }, { - "uid": "github/nlesc-sherlock/Rig", - "url": "https://github.com/nlesc-sherlock/Rig", - "rel": "/software/repository/github/nlesc-sherlock/Rig", - "avatar": "https://avatars1.githubusercontent.com/u/15137410?v=4", - "description": null, + "uid": "github/SotaYoshida/NuclearToolkit.jl", + "url": "https://github.com/SotaYoshida/NuclearToolkit.jl", + "rel": "/software/repository/github/SotaYoshida/NuclearToolkit.jl", + "avatar": "https://avatars.githubusercontent.com/u/52435497?v=4", + "description": "NuclearToolkit.jl: Julia package for nuclear structure calculations", "topics": [] }, { - "uid": "github/kazewong/flowMC", - "url": "https://github.com/kazewong/flowMC", - "rel": "/software/repository/github/kazewong/flowMC", - "avatar": "https://avatars.githubusercontent.com/u/8803931?v=4", - "description": "Normalizing-flow enhanced sampling package for probabilistic inference in Jax", - "topics": [ - "jax", - "mcmc", - "normalizing-flows", - "stat" - ] + "uid": "github/cvjena/JeFaPaTo", + "url": "https://github.com/cvjena/JeFaPaTo", + "rel": "/software/repository/github/cvjena/JeFaPaTo", + "avatar": "https://avatars.githubusercontent.com/u/1272801?v=4", + "description": "JeFaPaTo - A tool for the analysis of facial features", + "topics": [] }, { - "uid": "github/igmhub/ForestFlow", - "url": "https://github.com/igmhub/ForestFlow", - "rel": "/software/repository/github/igmhub/ForestFlow", - "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", - "description": "This code is a neural network emulator for the 3D flux power spectrum of the Lyman-alpha forest", + "uid": "github/cvjena/freestylo", + "url": "https://github.com/cvjena/freestylo", + "rel": "/software/repository/github/cvjena/freestylo", + "avatar": "https://avatars.githubusercontent.com/u/1272801?v=4", + "description": "Stylistic Device Detection Tool", "topics": [] }, { - "uid": "github/igmhub/LyaCoLoRe", - "url": "https://github.com/igmhub/LyaCoLoRe", - "rel": "/software/repository/github/igmhub/LyaCoLoRe", - "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", - "description": "Code development to use CoLoRe simulations for generating simulated Lyman alpha forest spectra", + "uid": "github/mlinderm/npsv", + "url": "https://github.com/mlinderm/npsv", + "rel": "/software/repository/github/mlinderm/npsv", + "avatar": "https://avatars.githubusercontent.com/u/419959?v=4", + "description": "Non-parametric structural variant genotyper", "topics": [] }, { - "uid": "github/igmhub/baofit", - "url": "https://github.com/igmhub/baofit", - "rel": "/software/repository/github/igmhub/baofit", - "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", - "description": "Fits cosmological data to measure baryon acoustic oscillations.", - "topics": [ - "c-plus-plus", - "astronomy" - ] - }, - { - "uid": "github/igmhub/picca", - "url": "https://github.com/igmhub/picca", - "rel": "/software/repository/github/igmhub/picca", - "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", - "description": "set of tools for continuum fitting, correlation function calculation, cosmological fits...", - "topics": [ - "cosmology", - "astrophysics", - "bao", - "lyman-alpha" - ] + "uid": "github/thomasdenecker/START-R", + "url": "https://github.com/thomasdenecker/START-R", + "rel": "/software/repository/github/thomasdenecker/START-R", + "avatar": "https://avatars2.githubusercontent.com/u/21334113?v=4", + "description": "Simple Tool for Analysis of Replication Timing with R", + "topics": [] }, { - "uid": "github/jollejolles/pirecorder", - "url": "https://github.com/JolleJolles/pirecorder", - "rel": "/software/repository/github/jollejolles/pirecorder", - "avatar": "https://avatars3.githubusercontent.com/u/8775649?v=4", - "description": "Controlled and automated image and video recording with the raspberry pi", + "uid": "github/mcsiple/mmrefpoints", + "url": "https://github.com/mcsiple/mmrefpoints", + "rel": "/software/repository/github/mcsiple/mmrefpoints", + "avatar": "https://avatars.githubusercontent.com/u/2936426?v=4", + "description": "A package for simulating marine mammal abundance and calculating reference points.", "topics": [ - "recording", - "raspberrypi", - "camera-calibration", - "rpi" + "bycatch", + "fisheries-management", + "marine-mammals", + "r", + "shiny" ] }, { - "uid": "github/AlexanderLabWHOI/EUKulele", - "url": "https://github.com/AlexanderLabWHOI/EUKulele", - "rel": "/software/repository/github/AlexanderLabWHOI/EUKulele", - "avatar": "https://avatars0.githubusercontent.com/u/44212672?v=4", - "description": "Automatic eukaryotic taxonomic classification", - "topics": [] - }, - { - "uid": "github/thachnguyen/CRISPRnano", - "url": "https://github.com/thachnguyen/CRISPRnano", - "rel": "/software/repository/github/thachnguyen/CRISPRnano", - "avatar": "https://avatars.githubusercontent.com/u/6381336?v=4", - "description": "A simple website analyzes CRISPR experiment for Oxford Nanopore Sequencing data.", - "topics": [] - }, - { - "uid": "github/bayesn/bayesn", - "url": "https://github.com/bayesn/bayesn", - "rel": "/software/repository/github/bayesn/bayesn", - "avatar": "https://avatars.githubusercontent.com/u/89660624?v=4", - "description": "A numpyro implementation of BayeSN, the optical-NIR SED model for type Ia supernovae", + "uid": "github/rksyouyou/SASOM-analysis", + "url": "https://github.com/rksyouyou/SASOM-analysis", + "rel": "/software/repository/github/rksyouyou/SASOM-analysis", + "avatar": "https://avatars.githubusercontent.com/u/5146962?v=4", + "description": "code and data for real data analysis in SASOM paper", "topics": [] }, { - "uid": "github/Magritte-code/Magritte", - "url": "https://github.com/Magritte-code/Magritte", - "rel": "/software/repository/github/Magritte-code/Magritte", - "avatar": "https://avatars.githubusercontent.com/u/34956055?v=4", - "description": "A modern software library for simulating radiation transport.", + "uid": "github/ACTCollaboration/zCluster", + "url": "https://github.com/ACTCollaboration/zCluster", + "rel": "/software/repository/github/ACTCollaboration/zCluster", + "avatar": "https://avatars.githubusercontent.com/u/8562336?v=4", + "description": "A package for measuring galaxy cluster photometric redshifts using data from large public surveys.", "topics": [ - "radiative-transfer", "astrophysics", - "physics-simulation" - ] - }, - { - "uid": "github/Magritte-code/pomme", - "url": "https://github.com/Magritte-code/pomme", - "rel": "/software/repository/github/Magritte-code/pomme", - "avatar": "https://avatars.githubusercontent.com/u/34956055?v=4", - "description": "Bayesian model reconstruction based on astronomical spectral line observations.", - "topics": [ - "3d-reconstruction", - "astronomy-astrophysics", - "astronomy-software", - "interferometry", - "spectral-lines", - "inverse-problem" + "python" ] }, { - "uid": "github/mrc-ide/rrq", - "url": "https://github.com/mrc-ide/rrq", - "rel": "/software/repository/github/mrc-ide/rrq", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":runner::runner::runner: Lightweight Redis queues", - "topics": [ - "infrastructure", - "cluster" - ] + "uid": "github/labjg/fibmeasure", + "url": "https://github.com/labjg/fibmeasure", + "rel": "/software/repository/github/labjg/fibmeasure", + "avatar": "https://avatars.githubusercontent.com/u/8569725?v=4", + "description": "Python/Cython module to find the centre of back-illuminated optical fibres in metrology images", + "topics": [] }, { - "uid": "github/mrc-ide/covid19-forecasts-orderly", - "url": "https://github.com/mrc-ide/covid19-forecasts-orderly", - "rel": "/software/repository/github/mrc-ide/covid19-forecasts-orderly", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "uid": "github/kungfugo/BellDiagonalQudits.jl", + "url": "https://github.com/kungfugo/BellDiagonalQudits.jl", + "rel": "/software/repository/github/kungfugo/BellDiagonalQudits.jl", + "avatar": "https://avatars.githubusercontent.com/u/91735193?v=4", "description": null, "topics": [] }, { - "uid": "github/mrc-ide/EpiEstim", - "url": "https://github.com/mrc-ide/EpiEstim", - "rel": "/software/repository/github/mrc-ide/EpiEstim", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "A tool to estimate time varying instantaneous reproduction number during epidemics", - "topics": [] + "uid": "github/artis-mcrt/artis", + "url": "https://github.com/artis-mcrt/artis", + "rel": "/software/repository/github/artis-mcrt/artis", + "avatar": "https://avatars.githubusercontent.com/u/80631204?v=4", + "description": "3D Monte Carlo radiative transfer code for supernovae", + "topics": [ + "monte-carlo" + ] }, { - "uid": "github/mrc-ide/PhyDyn", - "url": "https://github.com/mrc-ide/PhyDyn", - "rel": "/software/repository/github/mrc-ide/PhyDyn", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "PhyDyn: Epidemiological modelling in BEAST", + "uid": "github/brackham/speclib", + "url": "https://github.com/brackham/speclib", + "rel": "/software/repository/github/brackham/speclib", + "avatar": "https://avatars.githubusercontent.com/u/16804223?v=4", + "description": "Tools for working with stellar spectral libraries.", "topics": [] }, { - "uid": "github/mrc-ide/ring", - "url": "https://github.com/mrc-ide/ring", - "rel": "/software/repository/github/mrc-ide/ring", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":ring: Ring buffers", + "uid": "github/ThibaultFillion/strengths", + "url": "https://github.com/ThibaultFillion/strengths", + "rel": "/software/repository/github/ThibaultFillion/strengths", + "avatar": "https://avatars.githubusercontent.com/u/145604448?v=4", + "description": "inhomogeneous reaction diffusion python package", "topics": [] }, { - "uid": "github/mrc-ide/cinterpolate", - "url": "https://github.com/mrc-ide/cinterpolate", - "rel": "/software/repository/github/mrc-ide/cinterpolate", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":bar_chart::arrow_right::wavy_dash: Interpolating functions from C, in R", + "uid": "github/iterize/tenta", + "url": "https://github.com/iterize/tenta", + "rel": "/software/repository/github/iterize/tenta", + "avatar": "https://avatars.githubusercontent.com/u/137326893?v=4", + "description": "Manage your sensors remotely and in real-time", "topics": [ - "infrastructure" + "dashboard", + "internet-of-things", + "iot", + "mqtt", + "network", + "python", + "real-time", + "sensor" ] }, { - "uid": "github/mrc-ide/global-lmic-reports-orderly", - "url": "https://github.com/mrc-ide/global-lmic-reports-orderly", - "rel": "/software/repository/github/mrc-ide/global-lmic-reports-orderly", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "COVID-19 forecast reports for LMICs", + "uid": "github/CarlosCoba/XookSuut-code", + "url": "https://github.com/CarlosCoba/XookSuut-code", + "rel": "/software/repository/github/CarlosCoba/XookSuut-code", + "avatar": "https://avatars.githubusercontent.com/u/47892914?v=4", + "description": "XookSuut is a python tool for modeling non-circular flows in galaxies with resolved velocity maps.", "topics": [] }, { - "uid": "github/mrc-ide/dust", - "url": "https://github.com/mrc-ide/dust", - "rel": "/software/repository/github/mrc-ide/dust", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":sparkles::sparkles::sparkles: Iterate multiple realisations of stochastic models", + "uid": "github/jczarnowski/DeepFactors", + "url": "https://github.com/jczarnowski/DeepFactors", + "rel": "/software/repository/github/jczarnowski/DeepFactors", + "avatar": "https://avatars.githubusercontent.com/u/1465574?v=4", + "description": "Real-Time Probabilistic Dense Monocular SLAM Using Compact Code Representation", "topics": [] }, { - "uid": "github/mrc-ide/dde", - "url": "https://github.com/mrc-ide/dde", - "rel": "/software/repository/github/mrc-ide/dde", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":clock1130::soon::clock9: Delay differential equation solver", + "uid": "github/Singh-Lab/uKIN", + "url": "https://github.com/Singh-Lab/uKIN", + "rel": "/software/repository/github/Singh-Lab/uKIN", + "avatar": "https://avatars.githubusercontent.com/u/21062767?v=4", + "description": "Using Knowledge In Networks", "topics": [] }, { - "uid": "github/mrc-ide/individual", - "url": "https://github.com/mrc-ide/individual", - "rel": "/software/repository/github/mrc-ide/individual", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "R Package for individual based epidemiological models", - "topics": [ - "r", - "r-package", - "rstats", - "epidemiology", - "agent-based-modeling", - "individual-based-modelling", - "infectious-diseases" - ] + "uid": "github/Singh-Lab/DeMaSk", + "url": "https://github.com/Singh-Lab/DeMaSk", + "rel": "/software/repository/github/Singh-Lab/DeMaSk", + "avatar": "https://avatars.githubusercontent.com/u/21062767?v=4", + "description": "Prediction of protein substitution impact using a directional substitution matrix and homolog alignments", + "topics": [] }, { - "uid": "github/mrc-ide/provisionr", - "url": "https://github.com/mrc-ide/provisionr", - "rel": "/software/repository/github/mrc-ide/provisionr", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": ":package::package::arrow_right::classical_building: Provision a library of R packages", - "topics": [ - "infrastructure", - "cluster" - ] + "uid": "github/arhstevens/DarkSage", + "url": "https://github.com/arhstevens/DarkSage", + "rel": "/software/repository/github/arhstevens/DarkSage", + "avatar": "https://avatars.githubusercontent.com/u/12620672?v=4", + "description": "The Dark Sage semi-analytic model", + "topics": [] }, { - "uid": "github/mrc-ide/sircovid", - "url": "https://github.com/mrc-ide/sircovid", - "rel": "/software/repository/github/mrc-ide/sircovid", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": null, + "uid": "github/bio-ontology-research-group/deepgoplus", + "url": "https://github.com/bio-ontology-research-group/deepgoplus", + "rel": "/software/repository/github/bio-ontology-research-group/deepgoplus", + "avatar": "https://avatars.githubusercontent.com/u/11040886?v=4", + "description": "DeepGO with GOPlus axioms", "topics": [] }, { - "uid": "github/mrc-ide/squire", - "url": "https://github.com/mrc-ide/squire", - "rel": "/software/repository/github/mrc-ide/squire", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "SEIR transmission model of COVID-19. Documentation at:", + "uid": "github/zhoulinumass/ML-wPBE", + "url": "https://github.com/zhoulinumass/ML-wPBE", + "rel": "/software/repository/github/zhoulinumass/ML-wPBE", + "avatar": "https://avatars.githubusercontent.com/u/42041864?v=4", + "description": null, "topics": [] }, { - "uid": "github/mrc-ide/odin", - "url": "https://github.com/mrc-ide/odin", - "rel": "/software/repository/github/mrc-ide/odin", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "\u16a9 A DSL for describing and solving differential equations in R", + "uid": "github/emossoux/LIFELINE", + "url": "https://github.com/emossoux/LIFELINE", + "rel": "/software/repository/github/emossoux/LIFELINE", + "avatar": "https://avatars.githubusercontent.com/u/39989911?v=4", + "description": "Program for the computation of line profile in colliding wind binaries", "topics": [ - "infrastructure" + "x-ray", + "binary", + "astrophysics", + "stars" ] }, { - "uid": "github/mrc-ide/PlasmoMAPI", - "url": "https://github.com/mrc-ide/PlasmoMAPI", - "rel": "/software/repository/github/mrc-ide/PlasmoMAPI", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "Mapping Plasmodium Spatial Connectivity from Genetic Data", - "topics": [] + "uid": "github/adrientaudiere/MiscMetabar", + "url": "https://github.com/adrientaudiere/MiscMetabar", + "rel": "/software/repository/github/adrientaudiere/MiscMetabar", + "avatar": "https://avatars.githubusercontent.com/u/6680165?v=4", + "description": "R package MiscMetabar: Miscellaneous functions for metabarcoding analysis", + "topics": [ + "ecology", + "metabarcoding", + "ngs-analysis", + "package", + "r" + ] }, { - "uid": "github/mrc-ide/drjacoby", - "url": "https://github.com/mrc-ide/drjacoby", - "rel": "/software/repository/github/mrc-ide/drjacoby", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "Flexible Markov chain monte carlo via reparameterization", + "uid": "github/Jane110111107/IsoTree", + "url": null, + "rel": "/software/repository/github/Jane110111107/IsoTree", + "avatar": "", + "description": "an efficient de novo trascriptome assembler for RNA-Seq data. It can assemble transcripts from RNA-Seq reads (in fasta format). Unlike most of de novo assembly methods that build de Bruijn graph or splicing graph by connecting k-mers which are sets of overlapping substrings generated from reads, IsoTree constructs splicing graph by connecting reads directly. For each splicing graph, IsoTree applies an iterative scheme of \u2026", "topics": [] }, { - "uid": "github/mrc-ide/covid-sim", - "url": "https://github.com/mrc-ide/covid-sim", - "rel": "/software/repository/github/mrc-ide/covid-sim", - "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", - "description": "This is the COVID-19 CovidSim microsimulation model developed by the MRC Centre for Global Infectious Disease Analysis hosted at Imperial College, London.", + "uid": "github/AlexMikes/AutoFunc", + "url": "https://github.com/AlexMikes/AutoFunc", + "rel": "/software/repository/github/AlexMikes/AutoFunc", + "avatar": "https://avatars.githubusercontent.com/u/24322176?v=4", + "description": "Data Mining for Automated Functional Representations", "topics": [] }, { - "uid": "github/tvwenger/millennium-tap-query", - "url": "https://github.com/tvwenger/millennium-tap-query", - "rel": "/software/repository/github/tvwenger/millennium-tap-query", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "A Python Tool to Query the Millennium Simulation UWS/TAP client", + "uid": "github/SpeedyWeather/SpeedyWeather.jl", + "url": "https://github.com/SpeedyWeather/SpeedyWeather.jl", + "rel": "/software/repository/github/SpeedyWeather/SpeedyWeather.jl", + "avatar": "https://avatars.githubusercontent.com/u/117775587?v=4", + "description": "Play atmospheric modelling like it's LEGO.", "topics": [] }, { - "uid": "github/tvwenger/kd", - "url": "https://github.com/tvwenger/kd", - "rel": "/software/repository/github/tvwenger/kd", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "Utilities to calculate kinematic distances", - "topics": [] + "uid": "github/PyTomography/slicer_spect_recon", + "url": "https://github.com/PyTomography/slicer_spect_recon", + "rel": "/software/repository/github/PyTomography/slicer_spect_recon", + "avatar": "https://avatars.githubusercontent.com/u/177372450?v=4", + "description": "3d slicer extension for pytomography to enable easy reconstruction of SPECT images", + "topics": [ + "3d-slicer-extension", + "image-reconstruction" + ] }, { - "uid": "github/tvwenger/HII-Region-Models", - "url": "https://github.com/tvwenger/HII-Region-Models", - "rel": "/software/repository/github/tvwenger/HII-Region-Models", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": null, + "uid": "github/joshjchayes/TransitFit", + "url": "https://github.com/joshjchayes/TransitFit", + "rel": "/software/repository/github/joshjchayes/TransitFit", + "avatar": "https://avatars.githubusercontent.com/u/29756283?v=4", + "description": "Transit light curve fitting using nested sampling", "topics": [] }, { - "uid": "github/tvwenger/tmbidl", - "url": "https://github.com/tvwenger/tmbidl", - "rel": "/software/repository/github/tvwenger/tmbidl", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "TMBIDL - Single Dish Radio Astronomy Data Reduction Package", + "uid": "github/nivha/three_body_integration", + "url": "https://github.com/nivha/three_body_integration", + "rel": "/software/repository/github/nivha/three_body_integration", + "avatar": "https://avatars.githubusercontent.com/u/7469704?v=4", + "description": null, "topics": [] }, { - "uid": "github/tvwenger/wisp", - "url": "https://github.com/tvwenger/WISP", - "rel": "/software/repository/github/tvwenger/wisp", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "WISP: Wenger Interferometry Software Package", - "topics": [] + "uid": "github/PTsolvers/JustRelax.jl", + "url": "https://github.com/PTsolvers/JustRelax.jl", + "rel": "/software/repository/github/PTsolvers/JustRelax.jl", + "avatar": "https://avatars.githubusercontent.com/u/79769824?v=4", + "description": "Pseudo-transient accelerated iterative solvers", + "topics": [ + "cuda", + "geodynamics", + "hpc", + "julialang", + "parallel" + ] }, { - "uid": "github/tvwenger/kinematic_scaleheight", - "url": "https://github.com/tvwenger/kinematic_scaleheight", - "rel": "/software/repository/github/tvwenger/kinematic_scaleheight", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "Use MCMC methods to kinematically estimate the vertical distribution of clouds in the Galactic plane", + "uid": "github/rabrahm/zaspe", + "url": "https://github.com/rabrahm/zaspe", + "rel": "/software/repository/github/rabrahm/zaspe", + "avatar": "https://avatars.githubusercontent.com/u/16330156?v=4", + "description": "A Code to Measure Stellar Atmospheric Parameters and their Covariance from Spectra", "topics": [] }, { - "uid": "github/tvwenger/hii-region-kinematics", - "url": "https://github.com/tvwenger/hii-region-kinematics", - "rel": "/software/repository/github/tvwenger/hii-region-kinematics", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "Radio recombination line observations of simulated HII regions with various internal kinematic structure", + "uid": "github/rabrahm/ceres", + "url": "https://github.com/rabrahm/ceres", + "rel": "/software/repository/github/rabrahm/ceres", + "avatar": "https://avatars.githubusercontent.com/u/16330156?v=4", + "description": "A set of pipelines and routines for echelle spectrographs", "topics": [] }, { - "uid": "github/tvwenger/bayes_spec", - "url": "https://github.com/tvwenger/bayes_spec", - "rel": "/software/repository/github/tvwenger/bayes_spec", - "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", - "description": "A Bayesian Spectral Line Modeling Framework", + "uid": "github/mischaschirmer/nebular", + "url": "https://github.com/mischaschirmer/nebular", + "rel": "/software/repository/github/mischaschirmer/nebular", + "avatar": "https://avatars.githubusercontent.com/u/12635693?v=4", + "description": "NEBULAR is a lightweight software to synthesize the astrophysical spectrum of a hydrogen helium gas mix in collisional ionization equilibrium. It is written in C++ and depends on the GNU Scientific Library (GSL).", "topics": [] }, { - "uid": "github/stamatak/AxPcoords.dist", - "url": "https://github.com/stamatak/AxPcoords.dist", - "rel": "/software/repository/github/stamatak/AxPcoords.dist", - "avatar": "https://avatars.githubusercontent.com/u/880890?v=4", - "description": "AxPcoords implementation ", + "uid": "github/pyspeckit/pyspeckit", + "url": "https://github.com/pyspeckit/pyspeckit", + "rel": "/software/repository/github/pyspeckit/pyspeckit", + "avatar": "https://avatars.githubusercontent.com/u/2507522?v=4", + "description": "Python Spectroscopic Toolkit", "topics": [] }, { - "uid": "github/stamatak/ExaML", - "url": "https://github.com/stamatak/ExaML", - "rel": "/software/repository/github/stamatak/ExaML", - "avatar": "https://avatars.githubusercontent.com/u/880890?v=4", - "description": "Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI", - "topics": [] + "uid": "github/easystats/effectsize", + "url": "https://github.com/easystats/effectsize", + "rel": "/software/repository/github/easystats/effectsize", + "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", + "description": ":dragon: Compute and work with indices of effect size and standardized parameters", + "topics": [ + "effectsize", + "correlation", + "conversion", + "interpretation", + "cohens-d", + "anova", + "standardization", + "hedges-g", + "effect-size", + "compute", + "standardized" + ] }, { - "uid": "github/PatrickJTaylor/pengWann", - "url": "https://github.com/PatrickJTaylor/pengWann", - "rel": "/software/repository/github/PatrickJTaylor/pengWann", - "avatar": "https://avatars.githubusercontent.com/u/52406436?v=4", - "description": "A lightweight Python package for calculating descriptors of chemical bonding and local electronic structure from Wannier functions.", + "uid": "github/easystats/modelbased", + "url": "https://github.com/easystats/modelbased", + "rel": "/software/repository/github/easystats/modelbased", + "avatar": "https://avatars.githubusercontent.com/u/47102598?v=4", + "description": ":chart_with_upwards_trend: Estimate effects, contrasts and means based on statistical models", "topics": [ - "chemical-bonding", - "python", - "wannier-functions" + "contrasts", + "marginal", + "means", + "marginal-effects", + "predict", + "estimate", + "easystats", + "r", + "contrast-analysis", + "hacktoberfest", + "ggplot2" ] }, { - "uid": "github/wiederm/transformato", - "url": "https://github.com/wiederm/transformato", - "rel": "/software/repository/github/wiederm/transformato", - "avatar": "https://avatars.githubusercontent.com/u/31651017?v=4", - "description": "Set up relative free energy calculations using a common scaffold", + "uid": "github/easystats/parameters", + "url": "https://github.com/easystats/parameters", + "rel": "/software/repository/github/easystats/parameters", + "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", + "description": ":bar_chart: Computation and processing of models' parameters", "topics": [ - "charmm-gui", - "free-energy-calculations" + "pvalues", + "parameters", + "beta", + "ci", + "confidence-intervals", + "r", + "easystats", + "bootsrap", + "standardize", + "pca", + "feature", + "fa" ] }, { - "uid": "github/GaryBAYLOR/mixR", - "url": "https://github.com/GaryBAYLOR/mixR", - "rel": "/software/repository/github/GaryBAYLOR/mixR", - "avatar": "https://avatars.githubusercontent.com/u/12647683?v=4", - "description": "R package for fitting finite mixture models for both raw and binned data", - "topics": [] + "uid": "github/easystats/correlation", + "url": "https://github.com/easystats/correlation", + "rel": "/software/repository/github/easystats/correlation", + "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", + "description": ":link: Methods for Correlation Analysis", + "topics": [ + "correlation", + "r", + "easystats", + "bayesian", + "partial-correlations", + "gaussian-graphical-models", + "regression", + "correlations", + "matrix", + "bayesian-correlations" + ] }, { - "uid": "github/barentsen/k2flix", - "url": "https://github.com/barentsen/k2flix", - "rel": "/software/repository/github/barentsen/k2flix", - "avatar": "https://avatars.githubusercontent.com/u/817669?v=4", - "description": "Create beautiful quicklook movies from the pixel data observed by NASA's Kepler/K2/TESS spacecraft.", - "topics": [] + "uid": "github/easystats/performance", + "url": "https://github.com/easystats/performance", + "rel": "/software/repository/github/easystats/performance", + "avatar": "https://avatars.githubusercontent.com/u/47102598?v=4", + "description": ":muscle: Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)", + "topics": [ + "r2", + "aic", + "performance", + "models", + "loo", + "r", + "easystats", + "mixed-models" + ] }, { - "uid": "github/barentsen/dave", - "url": "https://github.com/barentsen/dave", - "rel": "/software/repository/github/barentsen/dave", - "avatar": "https://avatars.githubusercontent.com/u/817669?v=4", - "description": "Discovery And Vetting of K2 Exoplanets", + "uid": "github/STOmics/cs-benchmark", + "url": "https://github.com/STOmics/cs-benchmark", + "rel": "/software/repository/github/STOmics/cs-benchmark", + "avatar": "https://avatars.githubusercontent.com/u/129851450?v=4", + "description": "This repository is for cell segmentation benchmark", "topics": [] }, { - "uid": "github/kavir1698/EvoDynamics.jl", - "url": "https://github.com/kavir1698/EvoDynamics.jl", - "rel": "/software/repository/github/kavir1698/EvoDynamics.jl", - "avatar": "https://avatars.githubusercontent.com/u/3798865?v=4", - "description": "Simulation of eco-evolutionary dynamics on multi-trait networks", + "uid": "github/STOmics/EAGS", + "url": "https://github.com/STOmics/EAGS", + "rel": "/software/repository/github/STOmics/EAGS", + "avatar": "https://avatars.githubusercontent.com/u/129851450?v=4", + "description": "EAGS:efficient and adaptive Gaussian smoothing", "topics": [] }, { - "uid": "github/DJArmstrong/TransitSOM", - "url": "https://github.com/DJArmstrong/TransitSOM", - "rel": "/software/repository/github/DJArmstrong/TransitSOM", - "avatar": "https://avatars.githubusercontent.com/u/20772547?v=4", - "description": "A Self-Organising Map for Kepler and K2 Transits", - "topics": [] + "uid": "github/bessagroup/f3dasm", + "url": "https://github.com/bessagroup/f3dasm", + "rel": "/software/repository/github/bessagroup/f3dasm", + "avatar": "https://avatars.githubusercontent.com/u/64279108?v=4", + "description": "Framework for Data-Driven Design & Analysis of Structures & Materials (F3DASM)", + "topics": [ + "data-driven", + "machine-learning", + "computational-mechanics", + "design-of-experiments", + "framework", + "materials-science" + ] }, { - "uid": "github/kkjawz/coref-ee", - "url": "https://github.com/kkjawz/coref-ee", - "rel": "/software/repository/github/kkjawz/coref-ee", - "avatar": "https://avatars1.githubusercontent.com/u/888122?v=4", - "description": "Coreference Resolution With Entity Equalization", + "uid": "github/sdnjly/WSDL-AD", + "url": "https://github.com/sdnjly/WSDL-AD", + "rel": "/software/repository/github/sdnjly/WSDL-AD", + "avatar": "https://avatars.githubusercontent.com/u/6623062?v=4", + "description": null, "topics": [] }, { - "uid": "github/darrenjw/jax-smfsb", - "url": "https://github.com/darrenjw/jax-smfsb", - "rel": "/software/repository/github/darrenjw/jax-smfsb", - "avatar": "https://avatars.githubusercontent.com/u/1235734?v=4", - "description": "SMfSB code in JAX", + "uid": "github/tbisbas/PDFchem", + "url": "https://github.com/tbisbas/PDFchem", + "rel": "/software/repository/github/tbisbas/PDFchem", + "avatar": "https://avatars.githubusercontent.com/u/26414918?v=4", + "description": "Estimate the average abundance of species from Av-PDFs", "topics": [] }, { - "uid": "github/nikhil-sarin/redback", - "url": "https://github.com/nikhil-sarin/redback", - "rel": "/software/repository/github/nikhil-sarin/redback", - "avatar": "https://avatars.githubusercontent.com/u/42257246?v=4", - "description": "A Bayesian inference software package for end-to-end fitting and interpretation of electromagnetic transients", - "topics": [ - "kilonovae", - "supernovae", - "timedomainastronomy", - "astronomy", - "multi-messenger", - "tidal-disruptions", - "transients" - ] + "uid": "github/ArisTr/PyRaTE", + "url": "https://github.com/ArisTr/PyRaTE", + "rel": "/software/repository/github/ArisTr/PyRaTE", + "avatar": "https://avatars.githubusercontent.com/u/25152725?v=4", + "description": "Python Radiative Transfer Emission Code", + "topics": [] }, { - "uid": "github/VIB-PSB/MINI-EX", - "url": "https://github.com/VIB-PSB/MINI-EX", - "rel": "/software/repository/github/VIB-PSB/MINI-EX", - "avatar": "https://avatars.githubusercontent.com/u/23654185?v=4", - "description": "Motif-Informed Network Inference of cell type-specific gene regulatory networks in plants", + "uid": "github/jacksund/simmate", + "url": "https://github.com/jacksund/simmate", + "rel": "/software/repository/github/jacksund/simmate", + "avatar": "https://avatars.githubusercontent.com/u/47992949?v=4", + "description": "The Simulated Materials Ecosystem (Simmate) is a toolbox and framework for computational materials research.", "topics": [] }, { - "uid": "github/fermo-metabolomics/fermo_core", - "url": "https://github.com/fermo-metabolomics/fermo_core", - "rel": "/software/repository/github/fermo-metabolomics/fermo_core", - "avatar": "https://avatars.githubusercontent.com/u/206064852?v=4", - "description": "Data processing/analysis functionality of metabolomics dashboard FERMO", + "uid": "github/chihchunhsu/smart", + "url": "https://github.com/chihchunhsu/smart", + "rel": "/software/repository/github/chihchunhsu/smart", + "avatar": "https://avatars.githubusercontent.com/u/22515968?v=4", + "description": "Spectral Modeling Analysis and RV Tool", "topics": [] }, { - "uid": "github/davi-rodrigues/NAVanalysis", - "url": "https://github.com/davi-rodrigues/NAVanalysis", - "rel": "/software/repository/github/davi-rodrigues/NAVanalysis", - "avatar": "https://avatars.githubusercontent.com/u/39133660?v=4", - "description": "Normalized Additional Velocity analysis", + "uid": "github/fcs-analysis/PyScanFCS", + "url": "https://github.com/FCS-analysis/PyScanFCS", + "rel": "/software/repository/github/fcs-analysis/PyScanFCS", + "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", + "description": "data evaluation in perpendicular line scanning FCS", "topics": [] }, { - "uid": "github/davi-rodrigues/CCBH-Numerics", - "url": "https://github.com/davi-rodrigues/CCBH-Numerics", - "rel": "/software/repository/github/davi-rodrigues/CCBH-Numerics", - "avatar": "https://avatars.githubusercontent.com/u/39133660?v=4", - "description": "Using gravitational wave data, CCBH-Numerics computes the probability of the existence of a single cosmologically coupled black hole with a formation mass below a specified threshold. This tool was developed alongside the paper by Amendola, Rodrigues, Kumar, and Quartin, published in MNRAS in 2024", + "uid": "github/fcs-analysis/PyCorrFit", + "url": "https://github.com/FCS-analysis/PyCorrFit", + "rel": "/software/repository/github/fcs-analysis/PyCorrFit", + "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", + "description": "data analysis and fitting software for fluorescence correlation spectroscopy (FCS)", "topics": [] }, { - "uid": "github/tesselle/aion", - "url": "https://github.com/tesselle/aion", - "rel": "/software/repository/github/tesselle/aion", - "avatar": "https://avatars.githubusercontent.com/u/78033555?v=4", - "description": ":stopwatch: Archaeological Time Series", + "uid": "github/biocircuits/bioscrape", + "url": "https://github.com/biocircuits/bioscrape", + "rel": "/software/repository/github/biocircuits/bioscrape", + "avatar": "https://avatars.githubusercontent.com/u/34864391?v=4", + "description": "BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)", "topics": [ - "archaeological-science", - "archaeology", - "r-package", - "chronology", - "time-series" + "simulation", + "chemical-reaction-networks", + "crn", + "stochastic-simulation-algorithm", + "python", + "cython", + "parameter-identification" ] }, { - "uid": "github/soraxas/sbp-env", - "url": "https://github.com/soraxas/sbp-env", - "rel": "/software/repository/github/soraxas/sbp-env", - "avatar": "https://avatars.githubusercontent.com/u/22362177?v=4", - "description": "Motion planning environment for Sampling-based Planners", + "uid": "github/abschneider/StrainHub", + "url": "https://github.com/abschneider/StrainHub", + "rel": "/software/repository/github/abschneider/StrainHub", + "avatar": "https://avatars0.githubusercontent.com/u/26801239?v=4", + "description": "Welcome to the StrainHub Repo - Files and Data - StrainHub Online:", "topics": [ - "pathfinding", - "robotics", - "rrdt", - "rrt", - "rrt-star", - "motion-planning" + "phylogenetics", + "transmission-network", + "phylogenomics", + "phylogeography" ] }, { - "uid": "github/wbalmer/backtrack", - "url": "https://github.com/wbalmer/backtrack", - "rel": "/software/repository/github/wbalmer/backtrack", - "avatar": "https://avatars.githubusercontent.com/u/39763022?v=4", - "description": "Python package to fit relative astrometry with background star motion tracks. ", - "topics": [] - }, - { - "uid": "github/wbalmer/backtracks", - "url": "https://github.com/wbalmer/backtracks", - "rel": "/software/repository/github/wbalmer/backtracks", - "avatar": "https://avatars.githubusercontent.com/u/39763022?v=4", - "description": "Python package to fit relative astrometry with background star motion tracks. ", + "uid": "github/skendrew/midIR_sensitivity", + "url": "https://github.com/skendrew/midIR_sensitivity", + "rel": "/software/repository/github/skendrew/midIR_sensitivity", + "avatar": "https://avatars.githubusercontent.com/u/225201?v=4", + "description": "Code to calculate the sensitivity of a ground-based instrument for astronomy at mid-infrared wavelengths (3-15 micron). Written for the METIS instrument for the E-ELT but easily customisable.", "topics": [] }, { - "uid": "github/ArtificialStellarPopulations/ArtPop", - "url": "https://github.com/ArtificialStellarPopulations/ArtPop", - "rel": "/software/repository/github/ArtificialStellarPopulations/ArtPop", - "avatar": "https://avatars.githubusercontent.com/u/71847255?v=4", - "description": "Building artificial galaxies one star at a time. ", + "uid": "github/skendrew/milkywayproject_triggering", + "url": "https://github.com/skendrew/milkywayproject_triggering", + "rel": "/software/repository/github/skendrew/milkywayproject_triggering", + "avatar": "https://avatars.githubusercontent.com/u/225201?v=4", + "description": "Code to calculate correlation functions for two (astrophysical) catalogue datasets", "topics": [] }, { - "uid": "github/jonschwenk/RivGraph", - "url": "https://github.com/jonschwenk/RivGraph", - "rel": "/software/repository/github/jonschwenk/RivGraph", - "avatar": "https://avatars.githubusercontent.com/u/14874485?v=4", - "description": "Extracting and quantifying graphical representations of river and delta channel networks from binary masks", + "uid": "github/Teichlab/bin2cell", + "url": "https://github.com/Teichlab/bin2cell", + "rel": "/software/repository/github/Teichlab/bin2cell", + "avatar": "https://avatars.githubusercontent.com/u/13640351?v=4", + "description": "Join subcellular Visium HD bins into cells", "topics": [] }, { - "uid": "github/ZacharyJia/opsdn", - "url": "https://github.com/ZacharyJia/opsdn", - "rel": "/software/repository/github/ZacharyJia/opsdn", - "avatar": "https://avatars.githubusercontent.com/u/7402471?v=4", - "description": null, + "uid": "github/scipion-em/scipion-em-continuousflex", + "url": "https://github.com/scipion-em/scipion-em-continuousflex", + "rel": "/software/repository/github/scipion-em/scipion-em-continuousflex", + "avatar": "https://avatars.githubusercontent.com/u/41120294?v=4", + "description": "Plugin for continuous conformational flexibility analysis containing HEMNMA, StructMap, HEMNMA-3D and TomoFlow for in vitro and in situ cryo-EM/ET.", "topics": [] }, { - "uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", - "url": "https://github.com/MehrnooshTahani/MappingBLOS_MolecularClouds", - "rel": "/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", - "avatar": "https://avatars.githubusercontent.com/u/38359939?v=4", - "description": "Software to determine line of sight magnetic fields of molecular clouds (Tahani et al. 2018)", - "topics": [ - "faraday-rotation", - "molecular-clouds", - "magnetic-fields" - ] - }, - { - "uid": "github/xiaotiand/FunFor", - "url": "https://github.com/xiaotiand/FunFor", - "rel": "/software/repository/github/xiaotiand/FunFor", - "avatar": "https://avatars.githubusercontent.com/u/87001934?v=4", - "description": "FunFor R package", + "uid": "github/Michalychforever/AsPy", + "url": "https://github.com/Michalychforever/AsPy", + "rel": "/software/repository/github/Michalychforever/AsPy", + "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", + "description": "Code to compute the determinant of aspherical fluctuations in spherical collapse background", "topics": [] }, { - "uid": "github/dpseidel/stmove", - "url": "https://github.com/dpseidel/stmove", - "rel": "/software/repository/github/dpseidel/stmove", - "avatar": "https://avatars1.githubusercontent.com/u/16724456?v=4", - "description": "Build reproducible reports for spatial-temporal animal movement analysis", + "uid": "github/Michalychforever/CLASS_LVDM", + "url": "https://github.com/Michalychforever/CLASS_LVDM", + "rel": "/software/repository/github/Michalychforever/CLASS_LVDM", + "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", + "description": "CLASS extension that incorporates a model with Lorentz invariance violation in gravity and dark matter", "topics": [] }, { - "uid": "github/tahirulqamar/Deep-HPI-pred", - "url": "https://github.com/tahirulqamar/Deep-HPI-pred", - "rel": "/software/repository/github/tahirulqamar/Deep-HPI-pred", - "avatar": "https://avatars.githubusercontent.com/u/44988308?v=4", - "description": null, + "uid": "github/DRMacIver/shrinkray", + "url": "https://github.com/DRMacIver/shrinkray", + "rel": "/software/repository/github/DRMacIver/shrinkray", + "avatar": "https://avatars.githubusercontent.com/u/28623?v=4", + "description": "Shrink Ray is a new test-case reducer designed to be effective on a wide range of formats", "topics": [] }, { - "uid": "github/MickaelRigault/skysurvey", - "url": "https://github.com/MickaelRigault/skysurvey", - "rel": "/software/repository/github/MickaelRigault/skysurvey", - "avatar": "https://avatars.githubusercontent.com/u/7812822?v=4", - "description": "Simulate transients within the sky", + "uid": "github/cboursnell/crb-blast", + "url": "https://github.com/cboursnell/crb-blast", + "rel": "/software/repository/github/cboursnell/crb-blast", + "avatar": "https://avatars.githubusercontent.com/u/969401?v=4", + "description": "Conditional Reciprocal Best Blast", "topics": [] }, { - "uid": "github/MickaelRigault/ztfquery", - "url": "https://github.com/MickaelRigault/ztfquery", - "rel": "/software/repository/github/MickaelRigault/ztfquery", - "avatar": "https://avatars.githubusercontent.com/u/7812822?v=4", - "description": "Access ZTF data from Python ", + "uid": "github/skyfielders/python-skyfield", + "url": "https://github.com/skyfielders/python-skyfield", + "rel": "/software/repository/github/skyfielders/python-skyfield", + "avatar": "https://avatars.githubusercontent.com/u/11967071?v=4", + "description": "Elegant astronomy for Python", "topics": [] }, { - "uid": "github/NERC-CEH/RMAVIS", - "url": "https://github.com/NERC-CEH/RMAVIS", - "rel": "/software/repository/github/NERC-CEH/RMAVIS", - "avatar": "https://avatars.githubusercontent.com/u/5802506?v=4", - "description": "A R Shiny application for the assignment of vegetation survey plot data to GB NVC communities with additional exploratory analyses.", + "uid": "github/maho3/ltu-ili", + "url": "https://github.com/maho3/ltu-ili", + "rel": "/software/repository/github/maho3/ltu-ili", + "avatar": "https://avatars.githubusercontent.com/u/11132524?v=4", + "description": "Robust ML in Astro", "topics": [] }, { - "uid": "github/dpalmasan/TRUNAJOD2.0", - "url": "https://github.com/dpalmasan/TRUNAJOD2.0", - "rel": "/software/repository/github/dpalmasan/TRUNAJOD2.0", - "avatar": "https://avatars.githubusercontent.com/u/8723534?v=4", - "description": "An easy-to-use library to extract indices from texts.", - "topics": [ - "semantic-measurements", - "coherence", - "text-analysis", - "natural-language-processing", - "readability-metrics", - "text-processing", - "ttr", - "spacy", - "text-mining", - "spacy-extensions", - "cohesion", - "entity-graph", - "lexical-diversity", - "type-token-ratio" - ] - }, - { - "uid": "github/SHTOOLS/SHTOOLS", - "url": "https://github.com/SHTOOLS/SHTOOLS", - "rel": "/software/repository/github/SHTOOLS/SHTOOLS", - "avatar": "https://avatars.githubusercontent.com/u/8998566?v=4", - "description": "SHTOOLS - Spherical Harmonic Tools", + "uid": "github/Oftatkofta/cellocity", + "url": "https://github.com/Oftatkofta/cellocity", + "rel": "/software/repository/github/Oftatkofta/cellocity", + "avatar": "https://avatars.githubusercontent.com/u/6969742?v=4", + "description": "Scientific software for analysis of confluent cell dynamics.", "topics": [ - "spherical-harmonics", - "spectral-analysis", - "python", - "fortran", - "gravity-field", - "magnetic-field", - "topography", - "slepian-functions" + "microscopy", + "time-series-analysis", + "analysis", + "vector-analysis", + "microscopy-data", + "cell-dynamics" ] }, { - "uid": "github/Merck/BioPhi", - "url": "https://github.com/Merck/BioPhi", - "rel": "/software/repository/github/Merck/BioPhi", - "avatar": "https://avatars.githubusercontent.com/u/7306189?v=4", - "description": "BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.", + "uid": "github/ropensci-org/roblog", + "url": "https://github.com/ropensci-org/roblog", + "rel": "/software/repository/github/ropensci-org/roblog", + "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", + "description": "rOpenSci's blog guidance", "topics": [ - "antibody", - "humanization", - "humanness", - "sapiens", - "oasis" + "r", + "r-package", + "rstats", + "scalereprod" ] }, { - "uid": "github/Merck/pkglite", - "url": "https://github.com/Merck/pkglite", - "rel": "/software/repository/github/Merck/pkglite", - "avatar": "https://avatars.githubusercontent.com/u/7306189?v=4", - "description": "Compact Package Representations", + "uid": "github/ropensci-org/rotemplate", + "url": "https://github.com/ropensci-org/rotemplate", + "rel": "/software/repository/github/ropensci-org/rotemplate", + "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", + "description": "pkgdown template for rOpenSci packages :nail_care: :sparkles:", "topics": [ - "package", + "pkgdown", "r", - "packaging-tool", - "ectd" + "r-package", + "rstats", + "pkgdown" ] }, { - "uid": "github/franpoz/SHERLOCK", - "url": "https://github.com/franpoz/SHERLOCK", - "rel": "/software/repository/github/franpoz/SHERLOCK", - "avatar": "https://avatars.githubusercontent.com/u/15654884?v=4", - "description": "Easy and versatile open-source code to explore Kepler, K2 and TESS data in the search for exoplanets", + "uid": "github/ropensci-org/pkgreviewr", + "url": "https://github.com/ropensci-org/pkgreviewr", + "rel": "/software/repository/github/ropensci-org/pkgreviewr", + "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", + "description": "R package to facilitate rOpenSci package reviews.", "topics": [ - "exoplanets", - "tess", - "kepler" + "unconf18", + "r", + "r-package", + "rstats", + "review", + "ropensci-reviews", + "ropensci", + "unconf", + "review", + "ropensci", + "ropensci-reviews", + "unconf", + "unconf18", + "scalereprod" ] }, { - "uid": "github/stegmaja/TSE", - "url": "https://github.com/stegmaja/TSE", - "rel": "/software/repository/github/stegmaja/TSE", - "avatar": "https://avatars.githubusercontent.com/u/58080521?v=4", - "description": "Triple stellar evolution code", - "topics": [ - "astrophysics", - "black-holes", - "dynamics", - "gravitational-waves", - "stellar-evolution", - "three-body-problem", - "three-body-simulation", - "lidov-kozai" - ] + "uid": "github/jsobeck/MOOG_SCAT", + "url": "https://github.com/jsobeck/MOOG_SCAT", + "rel": "/software/repository/github/jsobeck/MOOG_SCAT", + "avatar": "https://avatars.githubusercontent.com/u/11219564?v=4", + "description": "Repository for the latest version of the MOOG_SCAT code", + "topics": [] }, { - "uid": "github/engyasin/Offline_MOT", - "url": "https://github.com/engyasin/Offline_MOT", - "rel": "/software/repository/github/engyasin/Offline_MOT", - "avatar": "https://avatars.githubusercontent.com/u/15736151?v=4", - "description": "Multiple traffic entities detection and tracking from bird-view drone stationary videos https://engyasin.github.io/Offline_MOT/", + "uid": "github/lnferris/ocean_data_tools", + "url": "https://github.com/lnferris/ocean_data_tools", + "rel": "/software/repository/github/lnferris/ocean_data_tools", + "avatar": "https://avatars1.githubusercontent.com/u/24570061?v=4", + "description": "A MATLAB toolbox for interacting with bulk freely-available oceanographic data.", "topics": [ - "multiple-object-tracking", - "drone", - "object-detection", - "python" + "oceanography", + "matlab", + "hycom", + "argo-floats", + "physical-oceanography", + "ocean", + "ocean-data" ] }, { - "uid": "github/DZeevi-Lab/TinkerHap", - "url": "https://github.com/DZeevi-Lab/TinkerHap", - "rel": "/software/repository/github/DZeevi-Lab/TinkerHap", - "avatar": "https://avatars.githubusercontent.com/u/184602495?v=4", - "description": "Read-Based Phasing Algorithm with Integrated Multi-Method Support for Enhanced Accuracy", - "topics": [ - "genetic-analysis", - "genetics", - "genomics", - "genomics-analysis" - ] + "uid": "github/nmslib/hnswlib", + "url": "https://github.com/nmslib/hnswlib", + "rel": "/software/repository/github/nmslib/hnswlib", + "avatar": "https://avatars.githubusercontent.com/u/37882366?v=4", + "description": "Header-only C++/python library for fast approximate nearest neighbors", + "topics": [] }, { - "uid": "github/nlesc/embodied-emotions-scripts", - "url": "https://github.com/NLeSC/embodied-emotions-scripts", - "rel": "/software/repository/github/nlesc/embodied-emotions-scripts", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "uid": "github/casasglobal-org/psymple", + "url": "https://github.com/casasglobal-org/psymple", + "rel": "/software/repository/github/casasglobal-org/psymple", + "avatar": "https://avatars.githubusercontent.com/u/126283305?v=4", "description": null, "topics": [] }, { - "uid": "github/nlesc/scriptcwl", - "url": "https://github.com/NLeSC/scriptcwl", - "rel": "/software/repository/github/nlesc/scriptcwl", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Create cwl workflows by writing a simple Python script", + "uid": "github/ropensci/rcol", + "url": "https://github.com/ropensci/rcol", + "rel": "/software/repository/github/ropensci/rcol", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "client for Catalogue of Life REST API", "topics": [ - "cwl", - "workflow", - "python" + "taxonomy", + "api-client", + "rstats", + "r", + "API", + "biology", + "science", + "species", + "web", + "data-access" ] }, { - "uid": "github/ComparativeGenomicsToolkit/cactus", - "url": "https://github.com/ComparativeGenomicsToolkit/cactus", - "rel": "/software/repository/github/ComparativeGenomicsToolkit/cactus", - "avatar": "https://avatars.githubusercontent.com/u/22846829?v=4", - "description": "Official home of genome aligner based upon notion of Cactus graphs", - "topics": [] - }, - { - "uid": "github/brinckmann/montepython_public", - "url": "https://github.com/brinckmann/montepython_public", - "rel": "/software/repository/github/brinckmann/montepython_public", - "avatar": "https://avatars.githubusercontent.com/u/15049519?v=4", - "description": "Public repository for the Monte Python Code", - "topics": [] - }, - { - "uid": "github/ivadomed/ivadomed", - "url": "https://github.com/ivadomed/ivadomed", - "rel": "/software/repository/github/ivadomed/ivadomed", - "avatar": "https://avatars.githubusercontent.com/u/67157284?v=4", - "description": "Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.", - "topics": [] - }, - { - "uid": "github/sanger-pathogens/Artemis", - "url": "https://github.com/sanger-pathogens/Artemis", - "rel": "/software/repository/github/sanger-pathogens/Artemis", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation", - "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" - ] - }, - { - "uid": "github/sanger-pathogens/ariba", - "url": "https://github.com/sanger-pathogens/ariba", - "rel": "/software/repository/github/sanger-pathogens/ariba", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Antimicrobial Resistance Identification By Assembly", - "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" - ] - }, - { - "uid": "github/sanger-pathogens/assembly-stats", - "url": "https://github.com/sanger-pathogens/assembly-stats", - "rel": "/software/repository/github/sanger-pathogens/assembly-stats", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Get assembly statistics from FASTA and FASTQ files", + "uid": "github/ropensci/assertr", + "url": "https://github.com/ropensci/assertr", + "rel": "/software/repository/github/ropensci/assertr", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Assertive programming for R analysis pipelines", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "global-health", - "infectious-diseases", - "pathogen" + "predicate-functions", + "analysis-pipeline", + "assertions", + "assertion-methods", + "assertion-library", + "r", + "rstats", + "r-package", + "peer-reviewed", + "scalereprod" ] }, { - "uid": "github/sanger-pathogens/pymummer", - "url": "https://github.com/sanger-pathogens/pymummer", - "rel": "/software/repository/github/sanger-pathogens/pymummer", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Python3 module for running MUMmer and reading the output", - "topics": [] - }, - { - "uid": "github/sanger-pathogens/snp-sites", - "url": "https://github.com/sanger-pathogens/snp-sites", - "rel": "/software/repository/github/sanger-pathogens/snp-sites", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Finds SNP sites from a multi-FASTA alignment file", + "uid": "github/ropensci/ezknitr", + "url": "https://github.com/ropensci/ezknitr", + "rel": "/software/repository/github/ropensci/ezknitr", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Avoid the typical working directory pain when using 'knitr'", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "rmarkdown", + "knitr", + "rmd", + "reproducibility", + "r", + "rstats", + "r-package", + "peer-reviewed", + "scalereprod" ] }, { - "uid": "github/sanger-pathogens/circlator", - "url": "https://github.com/sanger-pathogens/circlator", - "rel": "/software/repository/github/sanger-pathogens/circlator", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Circlator is a tool to circularize genome assemblies. The input is a genome assembly in FASTA format and corrected PacBio or nanopore reads in FASTA or FASTQ format. Circlator will attempt to identify each circular sequence and output a linearised version of it. It does this by assembling all reads that map to contig ends and comparing the resulting contigs with the input assembly.", + "uid": "github/ropensci/textreuse", + "url": "https://github.com/ropensci/textreuse", + "rel": "/software/repository/github/ropensci/textreuse", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Detect text reuse and document similarity", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "r", + "rstats", + "r-package", + "peer-reviewed", + "literature" ] }, { - "uid": "github/sanger-pathogens/Roary", - "url": "https://github.com/sanger-pathogens/Roary", - "rel": "/software/repository/github/sanger-pathogens/Roary", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Rapid large-scale prokaryote pan genome analysis", + "uid": "github/ropensci/slopes", + "url": "https://github.com/ropensci/slopes", + "rel": "/software/repository/github/ropensci/slopes", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Package to calculate slopes of roads, rivers and trajectories", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "geospatial" ] }, { - "uid": "github/sanger-pathogens/gubbins", - "url": "https://github.com/nickjcroucher/gubbins", - "rel": "/software/repository/github/sanger-pathogens/gubbins", - "avatar": "https://avatars.githubusercontent.com/u/16579395?v=4", - "description": "Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins", + "uid": "github/ropensci/prism", + "url": "https://github.com/ropensci/prism", + "rel": "/software/repository/github/ropensci/prism", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Download data from the Oregon PRISM climate data project http://www.prism.oregonstate.edu/", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "r", + "rstats", + "r-package", + "data-access" ] }, { - "uid": "github/sanger-pathogens/Bio-Tradis", - "url": "https://github.com/sanger-pathogens/Bio-Tradis", - "rel": "/software/repository/github/sanger-pathogens/Bio-Tradis", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "A set of tools to analyse the output from TraDIS analyses", + "uid": "github/ropensci/tinkr", + "url": "https://github.com/ropensci/tinkr", + "rel": "/software/repository/github/ropensci/tinkr", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Convert (R)Markdown files to XML, edit them, write them back as (R)Markdown", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "r", + "r-package", + "rstats", + "xpath", + "commonmark", + "xml", + "scalereprod" ] }, { - "uid": "github/sanger-pathogens/iva", - "url": "https://github.com/sanger-pathogens/iva", - "rel": "/software/repository/github/sanger-pathogens/iva", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "de novo virus assembler of Illumina paired reads", + "uid": "github/ropensci/pixelclasser", + "url": "https://github.com/ropensci/pixelclasser", + "rel": "/software/repository/github/ropensci/pixelclasser", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Classifies Image Pixels by Colour", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "bioinformatics-pipeline", - "global-health", - "infectious-diseases", - "pathogen" + "image-processing" ] }, { - "uid": "github/sanger-pathogens/Fastaq", - "url": "https://github.com/sanger-pathogens/Fastaq", - "rel": "/software/repository/github/sanger-pathogens/Fastaq", - "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", - "description": "Python3 scripts to manipulate FASTA and FASTQ files", + "uid": "github/ropensci/rzmq", + "url": "https://github.com/ropensci/rzmq", + "rel": "/software/repository/github/ropensci/rzmq", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "R package for ZMQ", "topics": [ - "genomics", - "sequencing", - "next-generation-sequencing", - "research", - "bioinformatics", - "global-health", - "infectious-diseases", - "pathogen" + "zmq", + "zeromq", + "r", + "rstats", + "r-package", + "scalereprod" ] }, { - "uid": "github/swiftbiosciences/primerclip", - "url": "https://github.com/swiftbiosciences/primerclip", - "rel": "/software/repository/github/swiftbiosciences/primerclip", - "avatar": "https://avatars.githubusercontent.com/u/34242556?v=4", - "description": "Swift Accel-Amplicon primer trimming tool for fast alignment-based primer trimming", - "topics": [] - }, - { - "uid": "github/tatekawa-astron/PN", - "url": "https://github.com/tatekawa-astron/PN", - "rel": "/software/repository/github/tatekawa-astron/PN", - "avatar": "https://avatars.githubusercontent.com/u/47408759?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/tatekawa-astron/3LPT-init", - "url": "https://github.com/tatekawa-astron/3LPT-init", - "rel": "/software/repository/github/tatekawa-astron/3LPT-init", - "avatar": "https://avatars.githubusercontent.com/u/47408759?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/ericcombiolab/LRTK", - "url": "https://github.com/ericcombiolab/LRTK", - "rel": "/software/repository/github/ericcombiolab/LRTK", - "avatar": "https://avatars.githubusercontent.com/u/103976514?v=4", - "description": "A unified and versatile toolkit for analyzing Linked-Read sequencing data", - "topics": [] - }, - { - "uid": "github/ropensci/DataSpaceR", - "url": "https://github.com/ropensci/DataSpaceR", - "rel": "/software/repository/github/ropensci/DataSpaceR", + "uid": "github/ropensci/binman", + "url": "https://github.com/ropensci/binman", + "rel": "/software/repository/github/ropensci/binman", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Interface to the CAVD DataSpace", + "description": "A Binary Download Manager", "topics": [ - "cavd-dataspace", - "data-access" + "r", + "r-package", + "rstats", + "http-tools" ] }, { - "uid": "github/ropensci/restez", - "url": "https://github.com/ropensci/restez", - "rel": "/software/repository/github/ropensci/restez", + "uid": "github/ropensci/plater", + "url": "https://github.com/ropensci/plater", + "rel": "/software/repository/github/ropensci/plater", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":sleeping: :open_file_folder: Create and Query a Local Copy of GenBank in R", + "description": "Tools to make it easy to work with microtiter plate-shaped data", "topics": [ - "genbank", - "dna", - "sequence", - "entrez", "r", - "r-package", "rstats", - "data-extraction" + "r-package", + "scalereprod" ] }, { - "uid": "github/ropensci/rgpdd", - "url": "https://github.com/ropensci/rgpdd", - "rel": "/software/repository/github/ropensci/rgpdd", + "uid": "github/ropensci/neotoma", + "url": "https://github.com/ropensci/neotoma", + "rel": "/software/repository/github/ropensci/neotoma", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to the Global Population Dynamics Database, http://www3.imperial.ac.uk/cpb/databases/gpdd", + "description": "Programmatic R interface to the Neotoma Paleoecological Database.", "topics": [ "r", "rstats", "r-package", + "neotoma-database", + "neotoma-apis", + "neotoma", + "cran", + "paleoecology", + "nsf", "data-access" ] }, { - "uid": "github/ropensci/tiler", - "url": "https://github.com/ropensci/tiler", - "rel": "/software/repository/github/ropensci/tiler", + "uid": "github/ropensci/tracerer", + "url": "https://github.com/ropensci/tracerer", + "rel": "/software/repository/github/ropensci/tracerer", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Generate geographic and non-geographic map tiles from R", + "description": "tracerer, 'Tracer for R', is an R package to work with the output of BEAST2", "topics": [ "r", "r-package", "rstats", - "geospatial" + "scalereprod" ] }, { - "uid": "github/ropensci/bomrang", - "url": "https://github.com/ropensci/bomrang", - "rel": "/software/repository/github/ropensci/bomrang", + "uid": "github/ropensci/writexl", + "url": "https://github.com/ropensci/writexl", + "rel": "/software/repository/github/ropensci/writexl", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Australian government Bureau of Meteorology (BOM) data client for R", + "description": "Portable, light-weight data frame to xlsx exporter for R", "topics": [ - "bom", - "meteorological-data", - "weather-forecast", - "australia", - "weather", - "weather-data", - "meteorology", + "libxlsxwriter", "r", + "xlsx", + "excel", "rstats", - "australia-bureau-of-meteorology", "r-package", - "peer-reviewed", - "data-access" + "data-extraction" ] }, { - "uid": "github/ropensci/brranching", - "url": "https://github.com/ropensci/brranching", - "rel": "/software/repository/github/ropensci/brranching", + "uid": "github/ropensci/pangaear", + "url": "https://github.com/ropensci/pangaear", + "rel": "/software/repository/github/ropensci/pangaear", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "I can haz all the phylogenies", + "description": "R client for the Pangaea database", "topics": [ + "paleobiology", + "scientific", + "data", "rstats", - "phylogeny", - "phylogenies", "r", "r-package", - "molecular", - "phylomatic", - "plants", - "tree", + "api-client", + "webservice-client", + "archive", + "atmosphere", + "chemistry", + "earthscience", + "ecology", + "environmentalscience", + "paleontology", + "Pangaea", "data-access" ] }, { - "uid": "github/ropensci/SymbiotaR2", - "url": "https://github.com/ropensci/SymbiotaR2", - "rel": "/software/repository/github/ropensci/SymbiotaR2", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "SymbiotaR2: an R package for accessing and downloading from Symbiota2 portals", + "uid": "github/ropensci/rcitoid", + "url": "https://github.com/ropensci/rcitoid", + "rel": "/software/repository/github/ropensci/rcitoid", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Citation data via Wikimedia using the Citoid service ", "topics": [ - "symbiota2-portal", - "database", - "library", "r", - "symbiota", - "specimen-records", - "symbiota2" + "rstats", + "api-client", + "wikimedia", + "citoid", + "doi", + "pmid", + "pmcid", + "isbn", + "r-package", + "citations", + "Citoid", + "literature", + "publications", + "text-ming", + "Wikicite", + "Wikipedia", + "literature" ] }, { - "uid": "github/ropensci/gittargets", - "url": "https://github.com/ropensci/gittargets", - "rel": "/software/repository/github/ropensci/gittargets", + "uid": "github/ropensci/taxview", + "url": "https://github.com/ropensci/taxview", + "rel": "/software/repository/github/ropensci/taxview", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Data version control for reproducible analysis pipelines in R with {targets}.", + "description": "Summarise and visualize data sets wrt taxonomy", "topics": [ - "data-version-control", - "data-versioning", - "workflow", - "data-science", "r", - "reproducible-research", "rstats", "r-package", - "reproducibility", - "targets" + "taxonomy" ] }, { - "uid": "github/ropensci/tidypmc", - "url": "https://github.com/ropensci/tidypmc", - "rel": "/software/repository/github/ropensci/tidypmc", + "uid": "github/ropensci/onekp", + "url": "https://github.com/ropensci/onekp", + "rel": "/software/repository/github/ropensci/onekp", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Parse full text XML documents from Pubmed Central", + "description": "Access sequences from the 1000 Plant Initiative (1KP)", "topics": [ - "literature" + "r", + "rstats", + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/bikedata", - "url": "https://github.com/ropensci/bikedata", - "rel": "/software/repository/github/ropensci/bikedata", + "uid": "github/ropensci/antanym", + "url": "https://github.com/ropensci/antanym", + "rel": "/software/repository/github/ropensci/antanym", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":bike: Extract data from public hire bicycle systems", + "description": "R package for Antarctic geographic placenames", "topics": [ - "bicycle-hire-systems", + "peer-reviewed", "r", - "rstats", - "bike-hire", - "bicycle-hire", - "database", - "bike-data", "r-package", - "peer-reviewed", - "bike-hire-systems", + "rstats", + "Antarctic", + "gazetteer", + "placenames", + "SouthernOcean", "data-access" ] }, { - "uid": "github/ropensci/datapack", - "url": "https://github.com/ropensci/datapack", - "rel": "/software/repository/github/ropensci/datapack", + "uid": "github/ropensci/mapscanner", + "url": "https://github.com/ropensci/mapscanner", + "rel": "/software/repository/github/ropensci/mapscanner", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package to handle data packages", + "description": "R package to print maps, draw on them, and scan them back in", "topics": [ - "r", - "rstats", "r-package", - "scalereprod" + "maps", + "scan", + "spatial", + "geospatial" ] }, { - "uid": "github/ropensci/textreuse", - "url": "https://github.com/ropensci/textreuse", - "rel": "/software/repository/github/ropensci/textreuse", + "uid": "github/ropensci/jagstargets", + "url": "https://github.com/ropensci/jagstargets", + "rel": "/software/repository/github/ropensci/jagstargets", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Detect text reuse and document similarity", + "description": "Reproducible Bayesian data analysis pipelines with targets and JAGS", "topics": [ "r", "rstats", - "r-package", - "peer-reviewed", - "literature" + "reproducibility", + "high-performance-computing", + "bayesian", + "jags", + "rjags", + "statistics", + "targets", + "make", + "rstats-package", + "r-targetopia" ] }, { - "uid": "github/ropensci/opentripplanner", - "url": "https://github.com/ropensci/opentripplanner", - "rel": "/software/repository/github/ropensci/opentripplanner", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "An API wrapper for OpenTripPlanner (OTP) as an R package", + "uid": "github/ropensci/sofa", + "url": "https://github.com/ropensci/sofa", + "rel": "/software/repository/github/ropensci/sofa", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "easy R interface to CouchDB", "topics": [ - "r", - "transport", - "data", - "routing", - "opentripplanner", - "public-transport", - "transportation-planning", - "otp", - "java", - "isochrones" + "couchdb", + "couchdb-client", + "cloudant", + "database", + "r", + "rstats", + "r-package", + "CouchDB", + "documents", + "NoSQL", + "databases" ] }, { - "uid": "github/ropensci/cchecks", - "url": "https://github.com/ropensci/cchecks", - "rel": "/software/repository/github/ropensci/cchecks", + "uid": "github/ropensci/workloopR", + "url": "https://github.com/ropensci/workloopR", + "rel": "/software/repository/github/ropensci/workloopR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the cranchecks.info API", + "description": "\ud83d\udcaa Analysis of work loops and other data from muscle physiology experiments", "topics": [ - "rstats", - "cran", + "muscle-physiology-experiments", + "work-loop", + "muscle-force", + "tetanus", + "workloop", + "ddf", "r", - "testing", "r-package", - "monitoring", - "scalereprod" + "rstats", + "data-extraction" ] }, { - "uid": "github/ropensci/smapr", - "url": "https://github.com/ropensci/smapr", - "rel": "/software/repository/github/ropensci/smapr", + "uid": "github/ropensci/rdhs", + "url": "https://github.com/ropensci/rdhs", + "rel": "/software/repository/github/ropensci/rdhs", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package for acquisition and processing of NASA SMAP data", + "description": "API Client and Data Munging for the Demographic and Health Survey Data", "topics": [ - "nasa", - "smap-data", - "raster", - "extract-data", - "acquisition", - "soil-moisture", - "soil-moisture-sensor", - "soil-mapping", + "dataset", + "survey-data", + "dhs", + "extract", + "dhs-api", "peer-reviewed", "r", "r-package", @@ -2867,35 +2937,41 @@ ] }, { - "uid": "github/ropensci/osmextract", - "url": "https://github.com/ropensci/osmextract", - "rel": "/software/repository/github/ropensci/osmextract", + "uid": "github/ropensci/taxa", + "url": "https://github.com/ropensci/taxa", + "rel": "/software/repository/github/ropensci/taxa", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Download and import OpenStreetMap data from Geofabrik and other providers", + "description": "taxonomic classes for R", "topics": [ - "osm", - "osm-pbf", + "taxonomy", + "taxon", + "data-cleaning", "rstats", "r", - "open-data", - "geofabrik-zone", - "geo", - "geospatial" + "r-package", + "biology", + "hierarchy" ] }, { - "uid": "github/ropensci/xslt", - "url": "https://github.com/ropensci/xslt", - "rel": "/software/repository/github/ropensci/xslt", + "uid": "github/ropensci/fingertipsR", + "url": "https://github.com/ropensci/fingertipsR", + "rel": "/software/repository/github/ropensci/fingertipsR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Extension of xml2 package for xsl transformations", + "description": "R package to interact with Public Health England\u2019s Fingertips data tool", "topics": [ - "xslt", - "xml", + "public-health-england", + "fingertips", + "health", + "open-data", + "public-health", + "cran", + "api-wrapper", "r", "rstats", "r-package", - "data-extraction" + "peer-reviewed", + "data-access" ] }, { @@ -2925,740 +3001,620 @@ ] }, { - "uid": "github/ropensci/tarchetypes", - "url": "https://github.com/ropensci/tarchetypes", - "rel": "/software/repository/github/ropensci/tarchetypes", + "uid": "github/ropensci/rrricanes", + "url": "https://github.com/ropensci/rrricanes", + "rel": "/software/repository/github/ropensci/rrricanes", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Archetypes for targets and pipelines", + "description": "Web scraper for Atlantic and east Pacific hurricanes and tropical storms", "topics": [ - "reproducibility", - "high-performance-computing", "r", - "data-science", + "hurricane", + "weather", "rstats", - "pipeline", "r-package", - "workflow", - "targets", - "r-targetopia", "peer-reviewed", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/wellknown", - "url": "https://github.com/ropensci/wellknown", - "rel": "/software/repository/github/ropensci/wellknown", + "uid": "github/ropensci/rvertnet", + "url": "https://github.com/ropensci/rvertnet", + "rel": "/software/repository/github/ropensci/rvertnet", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "WKT <-> GeoJSON", + "description": "Wrapper to the VertNet API", "topics": [ - "geojson", - "wkt", - "wkb", + "api-wrapper", + "biodiversity", + "specimen", "rstats", - "wellknown", - "geospatial", - "spatial", + "vertnet", "r", + "spocc", "r-package", - "binary", - "conversion", - "well-known-text" + "mammalia", + "mammals", + "maps", + "occurrences", + "species", + "specimens", + "data-access" ] }, { - "uid": "github/ropensci/treebase", - "url": "https://github.com/ropensci/treebase", - "rel": "/software/repository/github/ropensci/treebase", + "uid": "github/ropensci/unifir", + "url": "https://github.com/ropensci/unifir", + "rel": "/software/repository/github/ropensci/unifir", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R interface to the treeBASE API (now on CRAN)", + "description": "A unifying interface for calling Unity from R", "topics": [ - "r", "rstats", - "r-package", - "data-access" + "cran", + "cran-r", + "r", + "unifir", + "visualization", + "unity", + "unity3d" ] }, { - "uid": "github/ropensci/pubchunks", - "url": "https://github.com/ropensci/pubchunks", - "rel": "/software/repository/github/ropensci/pubchunks", + "uid": "github/ropensci/grainchanger", + "url": "https://github.com/ropensci/grainchanger", + "rel": "/software/repository/github/ropensci/grainchanger", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Get chunks of XML format scholarly articles", + "description": "Data aggregation methods for raster data", + "topics": [ + "geospatial" + ] + }, + { + "uid": "github/ropensci/gitignore", + "url": "https://github.com/ropensci/gitignore", + "rel": "/software/repository/github/ropensci/gitignore", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "A R interface to fetch gitignore templates form gitignore.io", + "topics": [ + "scalereprod" + ] + }, + { + "uid": "github/ropensci/treestartr", + "url": "https://github.com/ropensci/treestartr", + "rel": "/software/repository/github/ropensci/treestartr", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "An R package for making starting trees from combined molecular, morphological and stratigraphic data", "topics": [ - "text-mining", - "literature", - "open-access", - "xml", - "rstats", "r", "r-package", - "citations", - "full-text", - "pdf", - "publications", - "TDM", - "text-ming" + "rstats", + "data-extraction" ] }, { - "uid": "github/ropensci/dbhydroR", - "url": "https://github.com/ropensci/dbhydroR", - "rel": "/software/repository/github/ropensci/dbhydroR", + "uid": "github/ropensci/RefManageR", + "url": "https://github.com/ropensci/RefManageR", + "rel": "/software/repository/github/ropensci/RefManageR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the South Florida Water Management District's DBHYDRO Database :sweat_drops::palm_tree:", + "description": "R package RefManageR", "topics": [ - "water-quality", - "water-resources", - "ecology", - "geoscience", - "groundwater", - "government-data", "r", "rstats", "r-package", "peer-reviewed", - "data-access" + "scalereprod" ] }, { - "uid": "github/ropensci/photosearcher", - "url": "https://github.com/ropensci/photosearcher", - "rel": "/software/repository/github/ropensci/photosearcher", + "uid": "github/ropensci/stantargets", + "url": "https://github.com/ropensci/stantargets", + "rel": "/software/repository/github/ropensci/stantargets", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Searches Flickr for photographs and metadata ", + "description": "Reproducible Bayesian data analysis pipelines with targets and cmdstanr", "topics": [ - "data-access" + "r", + "rstats", + "reproducibility", + "high-performance-computing", + "stan", + "bayesian", + "statistics", + "targets", + "make", + "rstats-package", + "r-targetopia" ] }, { - "uid": "github/ropensci/rtweet", - "url": "https://github.com/ropensci/rtweet", - "rel": "/software/repository/github/ropensci/rtweet", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "\ud83d\udc26 R client for interacting with Twitter's [stream and REST] APIs", + "uid": "github/ropensci/tabulizer", + "url": "https://github.com/ropensci/tabulizer", + "rel": "/software/repository/github/ropensci/tabulizer", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Bindings for Tabula PDF Table Extractor Library", "topics": [ - "rtweet", - "r-rtweet", - "r-twitter", - "twitter", - "twitter-api", - "stream-api", - "rest-api", - "cran", - "tweets", - "r-package", + "tabula", + "tabular-data", + "pdf", + "java", + "pdf-document", "r", - "mkearney-r-package" + "r-package", + "ropensci", + "rstats", + "peer-reviewed", + "literature" ] }, { - "uid": "github/ropensci/microdemic", - "url": "https://github.com/ropensci/microdemic", - "rel": "/software/repository/github/ropensci/microdemic", + "uid": "github/ropensci/jqr", + "url": "https://github.com/ropensci/jqr", + "rel": "/software/repository/github/ropensci/jqr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "microsoft academic client", + "description": "R interface to jq ", "topics": [ - "api-client", - "scholarly-articles", - "scholarly-metadata", + "json", "rstats", + "jq", "r", "r-package", - "text-mining", - "citations", - "full-text", - "literature", - "pdf", - "publications", - "xml", - "literature" + "data-extraction" ] }, { - "uid": "github/ropensci/webmockr", - "url": "https://github.com/ropensci/webmockr", - "rel": "/software/repository/github/ropensci/webmockr", + "uid": "github/ropensci/europepmc", + "url": "https://github.com/ropensci/europepmc", + "rel": "/software/repository/github/ropensci/europepmc", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R library for stubbing and setting expectations on HTTP requests", + "description": "R Interface to Europe PMC RESTful Web Service", "topics": [ - "http", - "http-mocking", + "europe-pmc", + "r", "rstats", - "http-mock", - "mock", - "fakeweb", - "tdd", - "testing-tools", - "testing", + "bibliometrics", + "scientific-literature", + "scientific-publications", + "r-package", + "pubmed", + "pubmedcentral", + "literature" + ] + }, + { + "uid": "github/ropensci/rnaturalearthdata", + "url": "https://github.com/ropensci/rnaturalearthdata", + "rel": "/software/repository/github/ropensci/rnaturalearthdata", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "to hold data used by rnaturalearth", + "topics": [ "r", "r-package", - "API", - "curl", - "https", - "mocking", - "web-services", - "http-tools" + "rstats", + "geospatial" ] }, { - "uid": "github/ropensci/comtradr", - "url": "https://github.com/ropensci/comtradr", - "rel": "/software/repository/github/ropensci/comtradr", + "uid": "github/ropensci/bold", + "url": "https://github.com/ropensci/bold", + "rel": "/software/repository/github/ropensci/bold", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Functions for Interacting with the UN Comtrade API", + "description": "Interface to the Bold Systems barcode webservice", "topics": [ - "comtrade", - "api", - "supply-chain", + "api-wrapper", + "barcodes", + "sequences", "r", "rstats", "r-package", - "peer-reviewed", + "taxize", + "barcode", + "biodiversity", + "DNA", + "fasta", "data-access" ] }, { - "uid": "github/ropensci/wikitaxa", - "url": "https://github.com/ropensci/wikitaxa", - "rel": "/software/repository/github/ropensci/wikitaxa", + "uid": "github/ropensci/treedata.table", + "url": "https://github.com/ropensci/treedata.table", + "rel": "/software/repository/github/ropensci/treedata.table", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "taxonomy data from Wikipedia/Wikidata/Wikispecies", + "description": "A wrapper for data.table that enables fast manipulation of phylogenetic trees matched to data.", "topics": [ - "taxonomy", - "wikipedia-api", - "wikispecies", - "r", + "data-extraction" + ] + }, + { + "uid": "github/ropensci/ghql", + "url": "https://github.com/ropensci/ghql", + "rel": "/software/repository/github/ropensci/ghql", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "GraphQL R client", + "topics": [ + "graphql", + "graphql-client", "rstats", + "r", + "graphql-api", "r-package", - "taxize", "API", - "species", - "vernacular", + "curl", + "data", + "GraphQL", + "http", "web-services", - "Wikicommons", - "Wikipedia", - "Wikispecies" + "http-tools" ] }, { - "uid": "github/ropensci/dittodb", - "url": "https://github.com/ropensci/dittodb", - "rel": "/software/repository/github/ropensci/dittodb", + "uid": "github/ropensci/rsvg", + "url": "https://github.com/ropensci/rsvg", + "rel": "/software/repository/github/ropensci/rsvg", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "dittodb: A Test Environment for DB Queries in R", + "description": "SVG renderer for R based on librsvg2", "topics": [ - "databases" + "cairo", + "glib", + "librsvg", + "image-processing" ] }, { - "uid": "github/ropensci/chlorpromazineR", - "url": "https://github.com/ropensci/chlorpromazineR", - "rel": "/software/repository/github/ropensci/chlorpromazineR", + "uid": "github/ropensci/geonames", + "url": "https://github.com/ropensci/geonames", + "rel": "/software/repository/github/ropensci/geonames", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Calculate chlorpromazine-equivalent doses in R", + "description": "R package for accessing the geonames.org API", "topics": [ - "psychiatry", - "pharmacology", "r", - "antipsychotic", - "schizophrenia", - "scalereprod" + "rstats", + "r-package", + "geospatial" ] }, { - "uid": "github/ropensci/rnaturalearthhires", - "url": "https://github.com/ropensci/rnaturalearthhires", - "rel": "/software/repository/github/ropensci/rnaturalearthhires", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "high resolution naturalearth data for rnaturalearth", + "uid": "github/ropensci/rdataretriever", + "url": "https://github.com/ropensci/rdataretriever", + "rel": "/software/repository/github/ropensci/rdataretriever", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "R interface to the Data Retriever", "topics": [ + "science", + "data", + "data-science", + "database", + "datasets", "r", - "r-package", "rstats", - "data-access" + "r-package" ] }, { - "uid": "github/ropensci/rmangal", - "url": "https://github.com/ropensci/rmangal", - "rel": "/software/repository/github/ropensci/rmangal", + "uid": "github/ropensci/rsat", + "url": "https://github.com/ropensci/rsat", + "rel": "/software/repository/github/ropensci/rsat", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Retrieve and explore data from the ecological interactions database MANGAL", + "description": "Dealing with Multiplatform Satellite Images from Landsat, MODIS, and Sentinel ", "topics": [ - "datapublications", - "ecology", - "foodwebs", - "interactions", - "networks", - "openaccess", - "data-access" + "satellite-images", + "geospatial" ] }, { - "uid": "github/ropensci/jstor", - "url": "https://github.com/ropensci/jstor", - "rel": "/software/repository/github/ropensci/jstor", + "uid": "github/ropensci/beautier", + "url": "https://github.com/ropensci/beautier", + "rel": "/software/repository/github/ropensci/beautier", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Import journal data from DfR (JSTOR)", + "description": "R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2", "topics": [ - "jstor", - "text-analysis", - "text-mining", "r", - "peer-reviewed", "r-package", "rstats", - "literature" + "scalereprod" ] }, { - "uid": "github/ropensci/traits", - "url": "https://github.com/ropensci/traits", - "rel": "/software/repository/github/ropensci/traits", + "uid": "github/ropensci/epubr", + "url": "https://github.com/ropensci/epubr", + "rel": "/software/repository/github/ropensci/epubr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Species traits data", + "description": "Read EPUB files in R", "topics": [ - "traits", - "species", - "api-client", + "epub-files", "r", "rstats", "r-package", - "API", - "taxonomy", - "web-services", + "epub", + "epub-format", + "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/cleanEHR", - "url": "https://github.com/ropensci/cleanEHR", - "rel": "/software/repository/github/ropensci/cleanEHR", + "uid": "github/ropensci/cchecks", + "url": "https://github.com/ropensci/cchecks", + "rel": "/software/repository/github/ropensci/cchecks", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical data from CC-HIC", + "description": "R client for the cranchecks.info API", "topics": [ - "electronic-health-record", - "healthcare", - "big-data", - "critical-care", - "intensive-care", - "r", "rstats", + "cran", + "r", + "testing", "r-package", - "data-extraction" - ] - }, - { - "uid": "github/ropensci/pathviewr", - "url": "https://github.com/ropensci/pathviewr", - "rel": "/software/repository/github/ropensci/pathviewr", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "\ud83d\udc26 Tools to import, clean, and visualize animal movement data in R", - "topics": [ - "movement-data", - "motion", - "animal-movement", - "optitrack", - "flydra", - "visual-guidance", - "visual-perception", - "rstats", - "rstats-package", - "trajectory-analysis", - "trajectories", - "data-extraction" + "monitoring", + "scalereprod" ] }, { - "uid": "github/ropensci/tradestatistics", - "url": "https://github.com/ropensci/tradestatistics", - "rel": "/software/repository/github/ropensci/tradestatistics", + "uid": "github/ropensci/osmapiR", + "url": "https://github.com/ropensci/osmapiR", + "rel": "/software/repository/github/ropensci/osmapiR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to access Open Trade Statistics API", + "description": "An R interface to OpenStreetMap API for fetching and saving data from/to the OpenStreetMap database", "topics": [ + "openstreetmap", + "openstreetmap-api", + "osm", "r", "r-package", - "rstats", - "open-trade-statistics", - "api-wrapper", - "international-trade", - "data-table", - "jsonlite", - "data-access" + "osmapi" ] }, { - "uid": "github/ropensci/rsnps", - "url": "https://github.com/ropensci/rsnps", - "rel": "/software/repository/github/ropensci/rsnps", + "uid": "github/ropensci/treebase", + "url": "https://github.com/ropensci/treebase", + "rel": "/software/repository/github/ropensci/treebase", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Wrapper to a number of SNP web APIs", + "description": "An R interface to the treeBASE API (now on CRAN)", "topics": [ - "web-api", - "snps", - "data", - "rstats", "r", - "r-package", - "API", - "api-client", - "dbSNP", - "gene", - "genotype", - "NCBI", - "OpenSNP", - "sequence", - "snp", - "species", - "web", - "data-access" - ] - }, - { - "uid": "github/ropensci/ruODK", - "url": "https://github.com/ropensci/ruODK", - "rel": "/software/repository/github/ropensci/ruODK", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "ruODK: An R Client for the ODK Central API", - "topics": [ - "opendatakit", - "odata", - "odata-client", - "odk", - "odk-central", "rstats", "r-package", - "api", - "data", - "database", - "dataset", - "open-data", - "scalereprod" - ] - }, - { - "uid": "github/ropensci/dataaimsr", - "url": "https://github.com/ropensci/dataaimsr", - "rel": "/software/repository/github/ropensci/dataaimsr", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Australian Institute of Marine Science (AIMS) Data Platform API Client which provides easy access to AIMS Data Platform scientific data and information.", - "topics": [ - "aims", - "data", - "monitoring", - "weather", - "sst", - "australia", - "marine" + "data-access" ] }, { - "uid": "github/ropensci/rcites", - "url": "https://github.com/ropensci/rcites", - "rel": "/software/repository/github/ropensci/rcites", + "uid": "github/ropensci/graphql", + "url": "https://github.com/ropensci/graphql", + "rel": "/software/repository/github/ropensci/graphql", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: R package to access the CITES Speciesplus database ", + "description": "Bindings to libgraphqlparser for R", "topics": [ - "cites", - "api-client", - "trade", - "endangered-species", - "r-package", - "database", + "graphql", + "libgraphql", "r", "rstats", - "data-access" + "r-package", + "http-tools" ] }, { - "uid": "github/ropensci/colocr", - "url": "https://github.com/ropensci/colocr", - "rel": "/software/repository/github/ropensci/colocr", + "uid": "github/ropensci/mauricer", + "url": "https://github.com/ropensci/mauricer", + "rel": "/software/repository/github/ropensci/mauricer", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package for conducting co-localization analysis. Edit", + "description": "Install BEAST2 packages from R", "topics": [ - "image-analysis", - "colocalization", "r", "r-package", "rstats", - "data-extraction" + "scalereprod" ] }, { - "uid": "github/ropensci/mctq", - "url": "https://github.com/ropensci/mctq", - "rel": "/software/repository/github/ropensci/mctq", + "uid": "github/ropensci/paleobioDB", + "url": "https://github.com/ropensci/paleobioDB", + "rel": "/software/repository/github/ropensci/paleobioDB", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "\u2600 Tools to process the Munich ChronoType Questionnaire (MCTQ)", + "description": "R interface to the Paleobiology Database", "topics": [ - "chronobiology", - "mctq", - "sleep", - "r-package", - "peer-reviewed", "r", "rstats", - "data-extraction" + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/rfigshare", - "url": "https://github.com/ropensci/rfigshare", - "rel": "/software/repository/github/ropensci/rfigshare", + "uid": "github/ropensci/addressable", + "url": "https://github.com/ropensci/addressable", + "rel": "/software/repository/github/ropensci/addressable", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Programmatic interface for Figshare", + "description": "Email Address Validation", "topics": [ - "r", - "rstats", - "r-package", - "archiving", - "data", - "doi", - "repository", - "data-publication" + "geospatial" ] }, { - "uid": "github/ropensci/prism", - "url": "https://github.com/ropensci/prism", - "rel": "/software/repository/github/ropensci/prism", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Download data from the Oregon PRISM climate data project http://www.prism.oregonstate.edu/", + "uid": "github/ropensci/targets", + "url": "https://github.com/ropensci/targets", + "rel": "/software/repository/github/ropensci/targets", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "Function-oriented Make-like declarative workflows for R", "topics": [ + "reproducibility", + "high-performance-computing", "r", + "data-science", + "pipeline", "rstats", "r-package", - "data-access" + "workflow", + "targets", + "reproducible-research", + "make", + "r-targetopia", + "peer-reviewed" ] }, { - "uid": "github/ropensci/osmapiR", - "url": "https://github.com/ropensci/osmapiR", - "rel": "/software/repository/github/ropensci/osmapiR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R interface to OpenStreetMap API for fetching and saving data from/to the OpenStreetMap database", + "uid": "github/ropensci/coder", + "url": "https://github.com/ropensci/coder", + "rel": "/software/repository/github/ropensci/coder", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "Classification of Cases into Deterministic Categories", "topics": [ - "openstreetmap", - "openstreetmap-api", - "osm", "r", + "package", "r-package", - "osmapi" + "classification", + "icd-10", + "rstats" ] }, { - "uid": "github/ropensci/nomisr", - "url": "https://github.com/ropensci/nomisr", - "rel": "/software/repository/github/ropensci/nomisr", + "uid": "github/ropensci/dbparser", + "url": "https://github.com/ropensci/dbparser", + "rel": "/software/repository/github/ropensci/dbparser", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Access UK official statistics from the Nomis database through R.", + "description": "Source code for the R package, \"dbparser\" (i.e. DrugBank Parser)", "topics": [ - "r", - "geographic-data", - "census-data", - "uk", - "demography", - "api-client", - "rstats", - "officialstatistics", - "official-statistics", - "national-statistics", - "r-package", - "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/rdefra", - "url": "https://github.com/ropensci/rdefra", - "rel": "/software/repository/github/ropensci/rdefra", + "uid": "github/ropensci/taxize", + "url": "https://github.com/ropensci/taxize", + "rel": "/software/repository/github/ropensci/taxize", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "rdefra: Interact with the UK AIR Pollution Database from DEFRA", + "description": "A taxonomic toolbelt for R", "topics": [ - "r", + "taxonomy", + "data", + "api", + "biodiversity", + "biology", "rstats", - "r-package", - "uk", - "defra", - "air-pollution", - "air-quality", - "air-pollution-levels", - "peer-reviewed", - "data-access" - ] - }, - { - "uid": "github/ropensci/graphql", - "url": "https://github.com/ropensci/graphql", - "rel": "/software/repository/github/ropensci/graphql", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Bindings to libgraphqlparser for R", - "topics": [ - "graphql", - "libgraphql", + "nomenclature", + "darwincore", + "taxize", + "api-wrapper", "r", - "rstats", "r-package", - "http-tools" + "API", + "api-client", + "identifiers", + "JSON", + "names", + "species", + "web" ] }, { - "uid": "github/ropensci/EndoMineR", - "url": "https://github.com/ropensci/EndoMineR", - "rel": "/software/repository/github/ropensci/EndoMineR", + "uid": "github/ropensci/rppo", + "url": "https://github.com/ropensci/rppo", + "rel": "/software/repository/github/ropensci/rppo", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Endoscopic and Pathological data extraction for various endo-pathological data extraction", + "description": "R package for accessing PPO data store", "topics": [ "r", - "rstats", - "endoscopy", - "gastroenterology", - "semi-structured-data", - "text-mining", "r-package", + "rstats", "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/rplos", - "url": "https://github.com/ropensci/rplos", - "rel": "/software/repository/github/ropensci/rplos", + "uid": "github/ropensci/microdemic", + "url": "https://github.com/ropensci/microdemic", + "rel": "/software/repository/github/ropensci/microdemic", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the PLoS Journals API", + "description": "microsoft academic client", "topics": [ - "text-mining", - "xml", - "pdf", - "metadata", - "web-api", - "plos", - "r", + "api-client", + "scholarly-articles", + "scholarly-metadata", "rstats", + "r", "r-package", - "API", - "api-client", - "article", - "fulltext", - "JSON", - "library", - "PLOS", - "science", - "web", - "XML", + "text-mining", + "citations", + "full-text", + "literature", + "pdf", + "publications", + "xml", "literature" ] }, { - "uid": "github/ropensci/readODS", - "url": "https://github.com/ropensci/readODS", - "rel": "/software/repository/github/ropensci/readODS", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "read ODS files into R as data.frames", - "topics": [] - }, - { - "uid": "github/ropensci/rWBclimate", - "url": "https://github.com/ropensci/rWBclimate", - "rel": "/software/repository/github/ropensci/rWBclimate", + "uid": "github/ropensci/dbhydroR", + "url": "https://github.com/ropensci/dbhydroR", + "rel": "/software/repository/github/ropensci/dbhydroR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface for the World Bank climate data", + "description": "R interface to the South Florida Water Management District's DBHYDRO Database :sweat_drops::palm_tree:", "topics": [ + "water-quality", + "water-resources", + "ecology", + "geoscience", + "groundwater", + "government-data", "r", "rstats", "r-package", + "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/ckanr", - "url": "https://github.com/ropensci/ckanr", - "rel": "/software/repository/github/ropensci/ckanr", + "uid": "github/ropensci/RNeXML", + "url": "https://github.com/ropensci/RNeXML", + "rel": "/software/repository/github/ropensci/RNeXML", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the CKAN API", + "description": "Implementing semantically rich NeXML I/O in R", "topics": [ - "ckan-api", - "ckan", - "api-wrapper", - "open-data", "r", "rstats", + "nexml", + "phylogenetics", "r-package", - "api", - "data", - "database", - "dataset", - "databases" - ] - }, - { - "uid": "github/ropensci/stats19", - "url": "https://github.com/ropensci/stats19", - "rel": "/software/repository/github/ropensci/stats19", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for working with open road traffic casualty data from Great Britain", - "topics": [ - "r", - "r-package", - "rstats", - "car-crashes", - "data", - "road-safety", - "ropensci", - "stats19", - "transport", - "data-access" + "linked-data", + "metadata", + "data-publication" ] }, { - "uid": "github/ropensci/DoOR.data", - "url": "https://github.com/ropensci/DoOR.data", - "rel": "/software/repository/github/ropensci/DoOR.data", + "uid": "github/ropensci/cld2", + "url": "https://github.com/ropensci/cld2", + "rel": "/software/repository/github/ropensci/cld2", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package containing the data for the Database of Odor Responses", + "description": "R Wrapper for Google's Compact Language Detector 2", "topics": [ + "cld", + "cld2", + "language-detection", + "language-detector", "r", "rstats", "r-package", - "peer-reviewed", - "data-access" + "literature" ] }, { - "uid": "github/ropensci/sofa", - "url": "https://github.com/ropensci/sofa", - "rel": "/software/repository/github/ropensci/sofa", + "uid": "github/ropensci/rnaturalearth", + "url": "https://github.com/ropensci/rnaturalearth", + "rel": "/software/repository/github/ropensci/rnaturalearth", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "easy R interface to CouchDB", + "description": "an R package to hold and facilitate interaction with natural earth map data :earth_africa:", "topics": [ - "couchdb", - "couchdb-client", - "cloudant", - "database", + "peer-reviewed", "r", - "rstats", "r-package", - "CouchDB", - "documents", - "NoSQL", - "databases" + "rstats", + "geospatial" ] }, { - "uid": "github/ropensci/trufflesniffer", - "url": "https://github.com/ropensci/trufflesniffer", - "rel": "/software/repository/github/ropensci/trufflesniffer", + "uid": "github/ropensci/gutenbergr", + "url": "https://github.com/ropensci/gutenbergr", + "rel": "/software/repository/github/ropensci/gutenbergr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "snif out truffles (secrets) [passwords, tokens, api keys]", + "description": "Search and download public domain texts from Project Gutenberg", "topics": [ "r", - "rstats", - "secrets", "r-package", - "truffle", - "http-tools" + "rstats", + "peer-reviewed", + "data-access" ] }, { @@ -3694,1331 +3650,1348 @@ ] }, { - "uid": "github/ropensci/outcomerate", - "url": "https://github.com/ropensci/outcomerate", - "rel": "/software/repository/github/ropensci/outcomerate", + "uid": "github/ropensci/tidyhydat", + "url": "https://github.com/ropensci/tidyhydat", + "rel": "/software/repository/github/ropensci/tidyhydat", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "AAPOR Survey Outcome Rates", + "description": "An R package to import Water Survey of Canada hydrometric data and make it tidy", "topics": [ "r", - "survey", - "aapor", - "standards", - "disposition-codes", - "peer-reviewed", - "r-package", + "tidy-data", + "government-data", + "water-resources", "rstats", - "scalereprod" + "r-package", + "hydrology", + "hydrometrics", + "citz", + "data-access" ] }, { - "uid": "github/ropensci/elastic", - "url": "https://github.com/ropensci/elastic", - "rel": "/software/repository/github/ropensci/elastic", + "uid": "github/ropensci/rcites", + "url": "https://github.com/ropensci/rcites", + "rel": "/software/repository/github/ropensci/rcites", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the Elasticsearch HTTP API", + "description": ":package: R package to access the CITES Speciesplus database ", "topics": [ - "elasticsearch", - "http", + "cites", + "api-client", + "trade", + "endangered-species", + "r-package", "database", - "database-wrapper", - "json", - "rstats", "r", - "r-package", - "data-science", - "etl", - "API", - "documents", - "Elasticsearch", - "HTTP", - "Java", - "JSON", - "NoSQL", - "search", - "databases" + "rstats", + "data-access" ] }, { - "uid": "github/ropensci/visdat", - "url": "https://github.com/ropensci/visdat", - "rel": "/software/repository/github/ropensci/visdat", + "uid": "github/ropensci/osmextract", + "url": "https://github.com/ropensci/osmextract", + "rel": "/software/repository/github/ropensci/osmextract", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Preliminary Exploratory Visualisation of Data", + "description": "Download and import OpenStreetMap data from Geofabrik and other providers", "topics": [ - "missingness", - "visualisation", - "r", - "exploratory-data-analysis", - "ropensci", - "r-package", + "osm", + "osm-pbf", "rstats", - "peer-reviewed", - "data-visualization" - ] - }, - { - "uid": "github/ropensci/phylogram", - "url": "https://github.com/ropensci/phylogram", - "rel": "/software/repository/github/ropensci/phylogram", + "r", + "open-data", + "geofabrik-zone", + "geo", + "geospatial" + ] + }, + { + "uid": "github/ropensci/geojsonlint", + "url": "https://github.com/ropensci/geojsonlint", + "rel": "/software/repository/github/ropensci/geojsonlint", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Dendrograms for Evolutionary Analysis", + "description": "GeoJSON linting for R (THIS IS NOT THE SRC FOR geojsonlint.com)", "topics": [ - "peer-reviewed", + "geojson", + "linter", "r", - "r-package", "rstats", - "data-extraction" + "r-package", + "data", + "geospatial", + "hint", + "lint", + "schema", + "geospatial" ] }, { - "uid": "github/ropensci/unrtf", - "url": "https://github.com/ropensci/unrtf", - "rel": "/software/repository/github/ropensci/unrtf", + "uid": "github/ropensci/mctq", + "url": "https://github.com/ropensci/mctq", + "rel": "/software/repository/github/ropensci/mctq", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Wrapper for 'unrtf' utility to extract text from RTF documents", + "description": "\u2600 Tools to process the Munich ChronoType Questionnaire (MCTQ)", "topics": [ - "rtf", - "extract-text", - "unrtf", + "chronobiology", + "mctq", + "sleep", + "r-package", + "peer-reviewed", "r", "rstats", - "r-package", - "literature" + "data-extraction" ] }, { - "uid": "github/ropensci/weathercan", - "url": "https://github.com/ropensci/weathercan", - "rel": "/software/repository/github/ropensci/weathercan", + "uid": "github/ropensci/traits", + "url": "https://github.com/ropensci/traits", + "rel": "/software/repository/github/ropensci/traits", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for downloading weather data from Environment and Climate Change Canada", + "description": "Species traits data", "topics": [ - "weather-data", - "environment-canada", - "weather-downloader", + "traits", + "species", + "api-client", "r", "rstats", "r-package", - "peer-reviewed", + "API", + "taxonomy", + "web-services", "data-access" ] }, { - "uid": "github/ropensci/rrlite", - "url": "https://github.com/ropensci/rrlite", - "rel": "/software/repository/github/ropensci/rrlite", + "uid": "github/ropensci/phylogram", + "url": "https://github.com/ropensci/phylogram", + "rel": "/software/repository/github/ropensci/phylogram", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to rlite https://github.com/seppo0010/rlite", + "description": "Dendrograms for Evolutionary Analysis", "topics": [ + "peer-reviewed", "r", - "rstats", "r-package", - "peer-reviewed", - "databases" + "rstats", + "data-extraction" ] }, { - "uid": "github/ropensci/c14bazAAR", - "url": "https://github.com/ropensci/c14bazAAR", - "rel": "/software/repository/github/ropensci/c14bazAAR", + "uid": "github/ropensci/helminthR", + "url": "https://github.com/ropensci/helminthR", + "rel": "/software/repository/github/ropensci/helminthR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Package - Download and Prepare C14 Dates from Different Source Databases", + "description": "Accesses parasite occurrence records from the London Natural History Museum's Host-Parasite database, which contains over a quarter of a million helminth records.", "topics": [ - "radiocarbon-dates", - "archaeology", + "helminth", + "parasites", + "open-data", + "disease-networks", "r", + "rstats", + "r-package", "data-access" ] }, { - "uid": "github/ropensci/rtika", - "url": "https://github.com/ropensci/rtika", - "rel": "/software/repository/github/ropensci/rtika", + "uid": "github/ropensci/tarchetypes", + "url": "https://github.com/ropensci/tarchetypes", + "rel": "/software/repository/github/ropensci/tarchetypes", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Interface to Apache Tika", + "description": "Archetypes for targets and pipelines", "topics": [ + "reproducibility", + "high-performance-computing", "r", + "data-science", "rstats", + "pipeline", "r-package", + "workflow", + "targets", + "r-targetopia", "peer-reviewed", - "tika", - "extract-metadata", - "extract-text", - "pdf-files", - "parse", - "java", - "tesseract", - "literature" + "scalereprod" ] }, { - "uid": "github/ropensci/rbhl", - "url": "https://github.com/ropensci/rbhl", - "rel": "/software/repository/github/ropensci/rbhl", + "uid": "github/ropensci/rplos", + "url": "https://github.com/ropensci/rplos", + "rel": "/software/repository/github/ropensci/rplos", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the Biodiversity Heritage Library (BHL) API", + "description": "R client for the PLoS Journals API", "topics": [ - "web-api", - "biodiversity-heritage-library", - "data", + "text-mining", + "xml", + "pdf", "metadata", - "api-wrapper", + "web-api", + "plos", "r", "rstats", "r-package", "API", - "BHL", - "conservation", + "api-client", + "article", + "fulltext", + "JSON", "library", - "OCR", - "species", - "taxonomy", - "text-mining", - "web-services", - "data-access" + "PLOS", + "science", + "web", + "XML", + "literature" ] }, { - "uid": "github/ropensci/refimpact", - "url": "https://github.com/ropensci/refimpact", - "rel": "/software/repository/github/ropensci/refimpact", + "uid": "github/ropensci/pubchunks", + "url": "https://github.com/ropensci/pubchunks", + "rel": "/software/repository/github/ropensci/pubchunks", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "API wrapper for UK Research Excellence Framework 2014 Impact Case Studies Database", + "description": "Get chunks of XML format scholarly articles", "topics": [ - "uk", - "research-funding", - "research-improvement", - "directed-graph", - "directed-graphs", "text-mining", - "research-policy", - "r", + "literature", + "open-access", + "xml", "rstats", + "r", "r-package", - "peer-reviewed", - "literature" + "citations", + "full-text", + "pdf", + "publications", + "TDM", + "text-ming" ] }, { - "uid": "github/ropensci/predictNMB", - "url": "https://github.com/ropensci/predictNMB", - "rel": "/software/repository/github/ropensci/predictNMB", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/ropensci/bib2df", - "url": "https://github.com/ropensci/bib2df", - "rel": "/software/repository/github/ropensci/bib2df", + "uid": "github/ropensci/smapr", + "url": "https://github.com/ropensci/smapr", + "rel": "/software/repository/github/ropensci/smapr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Parse a BibTeX file to a tibble", + "description": "An R package for acquisition and processing of NASA SMAP data", "topics": [ - "bibtex", + "nasa", + "smap-data", + "raster", + "extract-data", + "acquisition", + "soil-moisture", + "soil-moisture-sensor", + "soil-mapping", + "peer-reviewed", "r", - "rstats", "r-package", - "peer-reviewed", - "data-extraction" + "rstats", + "data-access" ] }, { - "uid": "github/ropensci/MODISTools", - "url": "https://github.com/ropensci/MODISTools", - "rel": "/software/repository/github/ropensci/MODISTools", + "uid": "github/ropensci/weatherOz", + "url": "https://github.com/ropensci/weatherOz", + "rel": "/software/repository/github/ropensci/weatherOz", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to the MODIS Land Products Subsets Web Services", + "description": "An API Client for Australian Weather and Climate Data Resources", "topics": [ - "data-access" + "australia", + "rstats", + "weather", + "climate", + "api-client", + "data", + "weather-api", + "weather-forecast", + "rainfall", + "r" ] }, { - "uid": "github/ropensci/spiro", - "url": "https://github.com/ropensci/spiro", - "rel": "/software/repository/github/ropensci/spiro", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Work with data from cardiopulmonary exercise testing", - "topics": [] - }, - { - "uid": "github/ropensci/tesseract", - "url": "https://github.com/ropensci/tesseract", - "rel": "/software/repository/github/ropensci/tesseract", + "uid": "github/ropensci/katex", + "url": "https://github.com/ropensci/katex", + "rel": "/software/repository/github/ropensci/katex", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Bindings to Tesseract OCR engine for R", + "description": "Server side math to html rendering in R", "topics": [ - "tesseract", - "ocr", - "r", - "rstats", - "r-package", - "tesseract-ocr", - "image-processing" + "literature" ] }, { - "uid": "github/ropensci/getlandsat", - "url": "https://github.com/ropensci/getlandsat", - "rel": "/software/repository/github/ropensci/getlandsat", + "uid": "github/ropensci/rorcid", + "url": "https://github.com/ropensci/rorcid", + "rel": "/software/repository/github/ropensci/rorcid", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "get landsat 8 images and metadata", + "description": "A programmatic interface the Orcid.org API", "topics": [ - "landsat", - "data", + "api-wrapper", + "orcid", + "doi", + "scholarly-metadata", + "identifiers", "rstats", "r", + "orcid-api", "r-package", - "peer-reviewed", - "aws", - "earth", - "image", - "imaging", - "nasa", - "usgs", - "data-access" + "citations", + "literature", + "people", + "publications", + "scholarly", + "literature" ] }, { - "uid": "github/ropensci/rAltmetric", - "url": "https://github.com/ropensci/rAltmetric", - "rel": "/software/repository/github/ropensci/rAltmetric", + "uid": "github/ropensci/rcoreoa", + "url": "https://github.com/ropensci/rcoreoa", + "rel": "/software/repository/github/ropensci/rcoreoa", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Query and visualize metrics from altmetric.com", + "description": "CORE API R Client", "topics": [ - "altmetrics", + "api-wrapper", + "scholarly-metadata", "r", - "citations", - "bibliometrics", "rstats", "r-package", - "literature" + "citations", + "full-text", + "literature", + "metadata", + "pdf", + "publications", + "text-ming", + "data-access" ] }, { - "uid": "github/ropensci/NLMR", - "url": "https://github.com/ropensci/NLMR", - "rel": "/software/repository/github/ropensci/NLMR", + "uid": "github/ropensci/tidyqpcr", + "url": "https://github.com/ropensci/tidyqpcr", + "rel": "/software/repository/github/ropensci/tidyqpcr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "\ud83d\udce6 R package to simulate neutral landscape models \ud83c\udfd4", + "description": "quantitative PCR analysis in the tidyverse", "topics": [ + "qpcr-analysis", + "tidyverse", "r", - "spatial", - "landscape-ecology", - "neutral-landscape-model", "rstats", "r-package", - "peer-reviewed", - "geospatial" + "miqe", + "qpcr" ] }, { - "uid": "github/ropensci/lightr", - "url": "https://github.com/ropensci/lightr", - "rel": "/software/repository/github/ropensci/lightr", + "uid": "github/ropensci/handlr", + "url": "https://github.com/ropensci/handlr", + "rel": "/software/repository/github/ropensci/handlr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Import spectral data and related metadata in R", + "description": "convert among citation formats", "topics": [ + "citations", + "doi", + "digital-object-identifier", + "metadata", + "bibtex", + "citeproc", + "crosscite", + "ris", "r", - "spectroscopy", - "spectral-data", - "reproducible-research", - "reproducible-science", - "reproducibility", "r-package", - "file-import", - "data-extraction" + "rstats", + "citation", + "Citeproc", + "Codemeta", + "Crosscite", + "Crossref", + "JSON", + "RDF", + "RIS", + "XML", + "literature" ] }, { - "uid": "github/ropensci/gutenbergr", - "url": "https://github.com/ropensci/gutenbergr", - "rel": "/software/repository/github/ropensci/gutenbergr", + "uid": "github/ropensci/bittrex", + "url": "https://github.com/ropensci/bittrex", + "rel": "/software/repository/github/ropensci/bittrex", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Search and download public domain texts from Project Gutenberg", + "description": "A R Client for the Bittrex Crypto-Currency Exchange", "topics": [ + "crypto-currency-exchanges", + "finance", "r", - "r-package", "rstats", + "r-package", "peer-reviewed", + "cryptocurency-exchange", + "cryptocurrency", "data-access" ] }, { - "uid": "github/ropensci/rnassqs", - "url": "https://github.com/ropensci/rnassqs", - "rel": "/software/repository/github/ropensci/rnassqs", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface for the USDA National Agricultural Statistical Service's (NASS) 'Quick Stats' API (https://quickstats.nass.usda.gov/api)", - "topics": [ - "data-access" - ] - }, - { - "uid": "github/ropensci/RSelenium", - "url": "https://github.com/ropensci/RSelenium", - "rel": "/software/repository/github/ropensci/RSelenium", + "uid": "github/ropensci/webmockr", + "url": "https://github.com/ropensci/webmockr", + "rel": "/software/repository/github/ropensci/webmockr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R client for Selenium Remote WebDriver", + "description": "R library for stubbing and setting expectations on HTTP requests", "topics": [ - "rselenium", - "webdriver", - "selenium", - "r", + "http", + "http-mocking", "rstats", + "http-mock", + "mock", + "fakeweb", + "tdd", + "testing-tools", + "testing", + "r", "r-package", + "API", + "curl", + "https", + "mocking", + "web-services", "http-tools" ] }, { - "uid": "github/ropensci/rfishbase", - "url": "https://github.com/ropensci/rfishbase", - "rel": "/software/repository/github/ropensci/rfishbase", + "uid": "github/ropensci/oai", + "url": "https://github.com/ropensci/oai", + "rel": "/software/repository/github/ropensci/oai", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the fishbase.org database", + "description": "OAI-PMH R client", "topics": [ - "r", + "oai-pmh", "rstats", + "data-access", + "scholarly-api", + "r", "r-package", - "fishbase", - "taxonomy", - "fish", - "data-access" + "peer-reviewed", + "literature" ] }, { - "uid": "github/ropensci/piggyback", - "url": "https://github.com/ropensci/piggyback", - "rel": "/software/repository/github/ropensci/piggyback", + "uid": "github/ropensci/brranching", + "url": "https://github.com/ropensci/brranching", + "rel": "/software/repository/github/ropensci/brranching", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: for using large(r) data files on GitHub", + "description": "I can haz all the phylogenies", "topics": [ - "git-lfs", - "data-store", + "rstats", + "phylogeny", + "phylogenies", "r", - "peer-reviewed", "r-package", - "rstats", - "data-publication" + "molecular", + "phylomatic", + "plants", + "tree", + "data-access" ] }, { - "uid": "github/ropensci/rdatacite", - "url": "https://github.com/ropensci/rdatacite", - "rel": "/software/repository/github/ropensci/rdatacite", + "uid": "github/ropensci/gistr", + "url": "https://github.com/ropensci/gistr", + "rel": "/software/repository/github/ropensci/gistr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Wrapper to DataCite metadata", + "description": "Interact with GitHub gists from R", "topics": [ - "datacite", - "oai-pmh", - "metadata", + "gists", + "github-api", "api-wrapper", "rstats", "r", - "solr", - "identifier", + "github-gist", + "gist", "r-package", "API", - "data", - "dataset", + "code", + "GitHub", + "GitHubAPI", + "http", "https", - "scholarly", + "script", + "snippet", "web-services", - "literature" + "scalereprod" ] }, { - "uid": "github/ropensci/pdftools", - "url": "https://github.com/ropensci/pdftools", - "rel": "/software/repository/github/ropensci/pdftools", + "uid": "github/ropensci/bib2df", + "url": "https://github.com/ropensci/bib2df", + "rel": "/software/repository/github/ropensci/bib2df", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Text Extraction, Rendering and Converting of PDF Documents", + "description": "Parse a BibTeX file to a tibble", "topics": [ - "pdf-format", - "text-extraction", - "poppler-library", - "poppler", + "bibtex", "r", "rstats", - "pdf-files", - "pdftools", "r-package", - "literature" + "peer-reviewed", + "data-extraction" ] }, { - "uid": "github/ropensci/rfema", - "url": "https://github.com/ropensci/rfema", - "rel": "/software/repository/github/ropensci/rfema", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": " rfema allows users to access The Federal Emergency Management Agency's (FEMA) publicly available data through their API. The package provides a set of functions to easily navigate and access data from the National Flood Insurance Program along and FEMA's various disaster aid programs.", - "topics": [] - }, - { - "uid": "github/ropensci/worrms", - "url": "https://github.com/ropensci/worrms", - "rel": "/software/repository/github/ropensci/worrms", + "uid": "github/ropensci/censo2017", + "url": "https://github.com/ropensci/censo2017", + "rel": "/software/repository/github/ropensci/censo2017", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "World Register of Marine Species R client", + "description": "Una Base de Datos de Alto Rendimiento del Censo 2017 de Chile.", "topics": [ - "taxonomy", - "marine-species", - "api-wrapper", - "biology", + "chile", + "censo", + "census", + "demografia", + "demographics", "rstats", - "r", - "r-package", - "taxize", - "biological-data", - "fish", - "marine-biology", - "API", - "api-client", - "marine", - "science", - "species", - "web", - "worms" + "redatam", + "duckdb", + "data-access" ] }, { - "uid": "github/ropensci/grainchanger", - "url": "https://github.com/ropensci/grainchanger", - "rel": "/software/repository/github/ropensci/grainchanger", + "uid": "github/ropensci/opencv", + "url": "https://github.com/ropensci/opencv", + "rel": "/software/repository/github/ropensci/opencv", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Data aggregation methods for raster data", + "description": "R bindings for OpenCV", "topics": [ - "geospatial" + "unconf18", + "opencv", + "opencv-library", + "r", + "r-package", + "rstats", + "unconf", + "image-processing" ] }, { - "uid": "github/ropensci/rAvis", - "url": "https://github.com/ropensci/rAvis", - "rel": "/software/repository/github/ropensci/rAvis", + "uid": "github/ropensci/getlandsat", + "url": "https://github.com/ropensci/getlandsat", + "rel": "/software/repository/github/ropensci/getlandsat", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "rAvis: an R-package to download the information stored in \u201cproyectoavis\u201d, a citizen science bird project. ", + "description": "get landsat 8 images and metadata", "topics": [ - "r", + "landsat", + "data", "rstats", - "avis", - "citizen-science", - "bird", - "birds", - "proyectoavis", + "r", "r-package", + "peer-reviewed", + "aws", + "earth", + "image", + "imaging", + "nasa", + "usgs", "data-access" ] }, { - "uid": "github/ropensci/conditionz", - "url": "https://github.com/ropensci/conditionz", - "rel": "/software/repository/github/ropensci/conditionz", + "uid": "github/ropensci/ckanr", + "url": "https://github.com/ropensci/ckanr", + "rel": "/software/repository/github/ropensci/ckanr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "control how many times conditions are thrown", + "description": "R client for the CKAN API", "topics": [ + "ckan-api", + "ckan", + "api-wrapper", + "open-data", "r", "rstats", - "conditions", "r-package", - "condition", - "condition-control", - "message", - "warning", - "scalereprod" + "api", + "data", + "database", + "dataset", + "databases" ] }, { - "uid": "github/ropensci/antiword", - "url": "https://github.com/ropensci/antiword", - "rel": "/software/repository/github/ropensci/antiword", + "uid": "github/ropensci/parzer", + "url": "https://github.com/ropensci/parzer", + "rel": "/software/repository/github/ropensci/parzer", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R wrapper for antiword utility", + "description": "Parse geographic coordinates", "topics": [ - "antiword", - "extract-text", "r", "rstats", - "r-package", - "literature" + "geo", + "geospatial", + "parser", + "coordinates", + "data", + "latitude", + "longitude" ] }, { - "uid": "github/ropensci/skimr", - "url": "https://github.com/ropensci/skimr", - "rel": "/software/repository/github/ropensci/skimr", + "uid": "github/ropensci/jstor", + "url": "https://github.com/ropensci/jstor", + "rel": "/software/repository/github/ropensci/jstor", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A frictionless, pipeable approach to dealing with summary statistics", + "description": "Import journal data from DfR (JSTOR)", "topics": [ - "unconf17", + "jstor", + "text-analysis", + "text-mining", "r", - "summary-statistics", - "ropensci", - "unconf", + "peer-reviewed", "r-package", "rstats", - "peer-reviewed", - "scalereprod" + "literature" ] }, { - "uid": "github/ropensci/rnoaa", - "url": "https://github.com/ropensci/rnoaa", - "rel": "/software/repository/github/ropensci/rnoaa", + "uid": "github/ropensci/rinat", + "url": "https://github.com/ropensci/rinat", + "rel": "/software/repository/github/ropensci/rinat", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to many NOAA data APIs", + "description": "A programmatic interface to iNaturalist", "topics": [ - "noaa", - "climate", - "rstats", - "noaa-data", "r", + "rstats", + "spocc", + "inaturalist", "r-package", - "buoy", - "earth", - "ISD", - "NCDC", - "NOAA", - "precipitation", - "science", - "seaice", - "storm", - "temperature", - "tornadoe", "data-access" ] }, { - "uid": "github/ropensci/plotly", - "url": "https://github.com/ropensci/plotly", - "rel": "/software/repository/github/ropensci/plotly", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "An interactive graphing library for R", + "uid": "github/ropensci/CoordinateCleaner", + "url": "https://github.com/ropensci/CoordinateCleaner", + "rel": "/software/repository/github/ropensci/CoordinateCleaner", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.", "topics": [ "r", - "ggplot2", - "javascript", - "data-visualization", - "d3js", - "shiny", - "plotly", - "webgl", + "r-package", "rstats", - "r-package" + "data-extraction" ] }, { - "uid": "github/ropensci/pangaear", - "url": "https://github.com/ropensci/pangaear", - "rel": "/software/repository/github/ropensci/pangaear", + "uid": "github/ropensci/dataspice", + "url": "https://github.com/ropensci/dataspice", + "rel": "/software/repository/github/ropensci/dataspice", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the Pangaea database", + "description": ":hot_pepper: Create lightweight schema.org descriptions of your datasets", "topics": [ - "paleobiology", - "scientific", + "unconf18", + "schema-org", + "metadata", "data", - "rstats", + "dataset", "r", "r-package", - "api-client", - "webservice-client", - "archive", - "atmosphere", - "chemistry", - "earthscience", - "ecology", - "environmentalscience", - "paleontology", - "Pangaea", - "data-access" - ] - }, - { - "uid": "github/ropensci/fingertipsR", - "url": "https://github.com/ropensci/fingertipsR", - "rel": "/software/repository/github/ropensci/fingertipsR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to interact with Public Health England\u2019s Fingertips data tool", - "topics": [ - "public-health-england", - "fingertips", - "health", - "open-data", - "public-health", - "cran", - "api-wrapper", - "r", "rstats", - "r-package", - "peer-reviewed", - "data-access" + "unconf", + "data-publication" ] }, { - "uid": "github/ropensci/treestartr", - "url": "https://github.com/ropensci/treestartr", - "rel": "/software/repository/github/ropensci/treestartr", + "uid": "github/ropensci/daiquiri", + "url": "https://github.com/ropensci/daiquiri", + "rel": "/software/repository/github/ropensci/daiquiri", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package for making starting trees from combined molecular, morphological and stratigraphic data", + "description": "Data quality reporting for temporal datasets.", "topics": [ + "data-quality", + "initial-data-analysis", "r", "r-package", + "reproducible-research", "rstats", - "data-extraction" + "temporal-data", + "time-series" ] }, { - "uid": "github/ropensci/rnaturalearth", - "url": "https://github.com/ropensci/rnaturalearth", - "rel": "/software/repository/github/ropensci/rnaturalearth", + "uid": "github/ropensci/cde", + "url": "https://github.com/ropensci/cde", + "rel": "/software/repository/github/ropensci/cde", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "an R package to hold and facilitate interaction with natural earth map data :earth_africa:", + "description": "Repo for R package to query and download WFD data from the EA Catchment Data Explorer site", "topics": [ - "peer-reviewed", - "r", - "r-package", - "rstats", - "geospatial" + "data-access" ] }, { - "uid": "github/ropensci/gistr", - "url": "https://github.com/ropensci/gistr", - "rel": "/software/repository/github/ropensci/gistr", + "uid": "github/ropensci/robotstxt", + "url": "https://github.com/ropensci/robotstxt", + "rel": "/software/repository/github/ropensci/robotstxt", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interact with GitHub gists from R", + "description": "robots.txt file parsing and checking for R", "topics": [ - "gists", - "github-api", - "api-wrapper", - "rstats", + "robotstxt", + "crawler", + "webscraping", + "spider", + "scraper", "r", - "github-gist", - "gist", + "rstats", "r-package", - "API", - "code", - "GitHub", - "GitHubAPI", - "http", - "https", - "script", - "snippet", - "web-services", - "scalereprod" + "peer-reviewed", + "http-tools" ] }, { - "uid": "github/ropensci/UCSCXenaTools", - "url": "https://github.com/ropensci/UCSCXenaTools", - "rel": "/software/repository/github/ropensci/UCSCXenaTools", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": ":package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/", + "uid": "github/ropensci/piggyback", + "url": "https://github.com/ropensci/piggyback", + "rel": "/software/repository/github/ropensci/piggyback", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": ":package: for using large(r) data files on GitHub", "topics": [ - "ucsc-xena", - "downloader", - "api-client", - "tcga", - "ccle", - "icgc", - "ucsc", - "toil", - "treehouse", + "git-lfs", + "data-store", "r", - "bioinformatics" + "peer-reviewed", + "r-package", + "rstats", + "data-publication" ] }, { - "uid": "github/ropensci/rentrez", - "url": "https://github.com/ropensci/rentrez", - "rel": "/software/repository/github/ropensci/rentrez", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "talk with NCBI entrez using R", + "uid": "github/ropensci/DoOR.functions", + "url": "https://github.com/ropensci/DoOR.functions", + "rel": "/software/repository/github/ropensci/DoOR.functions", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "R package containing the functions used to build the Database of Odor Responses", "topics": [ "r", "rstats", - "r-package" + "r-package", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/stplanr", - "url": "https://github.com/ropensci/stplanr", - "rel": "/software/repository/github/ropensci/stplanr", + "uid": "github/ropensci/terrainr", + "url": "https://github.com/ropensci/terrainr", + "rel": "/software/repository/github/ropensci/terrainr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Sustainable transport planning with R", + "description": "Get DEMs and orthoimagery from the USGS National Map, georeference your images and merge rasters, and visualize with Unity 3D", "topics": [ "r", - "transport", - "spatial", - "rstats", "r-package", + "cran", + "terrainr", + "rstats", + "usgs", + "map", + "mapping", + "national-map", + "unity-rendering-engine", + "unity", + "map-tiles", + "progressr", "peer-reviewed", - "transport-planning", - "walking", - "cycling", - "pubic-transport", - "origin-destination", - "desire-lines", - "routes", - "routing", - "route-network", - "transportation", - "cycle", - "data-access" + "retrieve-data", + "orthoimagery", + "dems", + "datasets", + "nhd" ] }, { - "uid": "github/ropensci/pixelclasser", - "url": "https://github.com/ropensci/pixelclasser", - "rel": "/software/repository/github/ropensci/pixelclasser", + "uid": "github/ropensci/circle", + "url": "https://github.com/ropensci/circle", + "rel": "/software/repository/github/ropensci/circle", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Classifies Image Pixels by Colour", + "description": "R client package for the Circle CI API", "topics": [ - "image-processing" + "continuous-integration", + "circle-ci", + "api-client", + "continuous-deployment", + "scalereprod" ] }, { - "uid": "github/ropensci/ritis", - "url": "https://github.com/ropensci/ritis", - "rel": "/software/repository/github/ropensci/ritis", + "uid": "github/ropensci/USAboundaries", + "url": "https://github.com/ropensci/USAboundaries", + "rel": "/software/repository/github/ropensci/USAboundaries", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Integrated Taxonomic Information Service (ITIS) R client", + "description": "Historical and Contemporary Boundaries of the United States of America", "topics": [ - "api-wrapper", - "itis", - "taxonomy", - "rstats", + "spatial-data", + "history", + "digital-history", "r", + "rstats", "r-package", - "taxize", - "API", - "api-client", - "biology", - "identifiers", - "JSON", - "names", - "nomenclature", - "species", - "web" + "data-access" ] }, { - "uid": "github/ropensci/arkdb", - "url": "https://github.com/ropensci/arkdb", - "rel": "/software/repository/github/ropensci/arkdb", + "uid": "github/ropensci/rperseus", + "url": "https://github.com/ropensci/rperseus", + "rel": "/software/repository/github/ropensci/rperseus", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Archive and unarchive databases as flat text files", + "description": "Get texts from the Perseus Digital Library :hocho: :snake: :snake: :snake:", "topics": [ - "database", - "archiving", + "greek-bible", + "greek-new-testament", + "latin", + "classics", + "greek", + "perseus", + "perseus-digital-library", + "translation", "r", "rstats", - "dbi", - "peer-reviewed", "r-package", - "databases" + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/cffr", - "url": "https://github.com/ropensci/cffr", - "rel": "/software/repository/github/ropensci/cffr", + "uid": "github/ropensci/historydata", + "url": "https://github.com/ropensci/historydata", + "rel": "/software/repository/github/ropensci/historydata", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Generate Citation File Format (cff) Metadata for R Packages", + "description": "Datasets for Historians", "topics": [ "r", + "rstats", "r-package", - "attribution", - "citation-files", - "citation", - "citation-file-format" + "data-access" ] }, { - "uid": "github/ropensci/isdparser", - "url": "https://github.com/ropensci/isdparser", - "rel": "/software/repository/github/ropensci/isdparser", + "uid": "github/ropensci/rOPTRAM", + "url": "https://github.com/ropensci/rOPTRAM", + "rel": "/software/repository/github/ropensci/rOPTRAM", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "NOAA ISD/ISH file parser", + "description": "Derive Soil Moisture Using the OPTRAM Algorithm", + "topics": [] + }, + { + "uid": "github/ropensci/eia", + "url": "https://github.com/ropensci/eia", + "rel": "/software/repository/github/ropensci/eia", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "An R package wrapping the US Energy Information Administration open data API.", "topics": [ - "noaa", - "climate", - "rstats", - "isd", - "noaa-isd", - "r", + "eia-api", "r-package", - "data", - "ISD", - "NOAA", - "stations", + "energy-data", + "energy-information-administration", + "open-data", + "eia", + "cran", "data-access" ] }, { - "uid": "github/ropensci/antanym", - "url": "https://github.com/ropensci/antanym", - "rel": "/software/repository/github/ropensci/antanym", + "uid": "github/ropensci/USAboundariesData", + "url": "https://github.com/ropensci/USAboundariesData", + "rel": "/software/repository/github/ropensci/USAboundariesData", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for Antarctic geographic placenames", + "description": "Datasets for the 'USAboundaries' package", "topics": [ - "peer-reviewed", "r", - "r-package", "rstats", - "Antarctic", - "gazetteer", - "placenames", - "SouthernOcean", + "r-package", "data-access" ] }, { - "uid": "github/ropensci/rnpn", - "url": "https://github.com/ropensci/rnpn", - "rel": "/software/repository/github/ropensci/rnpn", + "uid": "github/ropensci/solrium", + "url": "https://github.com/ropensci/solrium", + "rel": "/software/repository/github/ropensci/solrium", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the National Phenology Network database API", + "description": "A general purpose R interface to Solr", "topics": [ - "web-api", - "species", - "data", + "solr", + "solr-client", + "solr-search", "rstats", + "database", "r", - "national-phenology-network", - "phenology", "r-package", + "API", + "JSON", + "search", + "web", + "XML", "data-access" ] }, { - "uid": "github/ropensci/mapr", - "url": "https://github.com/ropensci/mapr", - "rel": "/software/repository/github/ropensci/mapr", + "uid": "github/ropensci/outsider.devtools", + "url": "https://github.com/ropensci/outsider.devtools", + "rel": "/software/repository/github/ropensci/outsider.devtools", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Map species occurrence data", + "description": "Build your own modules for `outsider`", "topics": [ "rstats", - "ggplot2", - "leaflet", - "map", - "mapping", - "biodiversity", - "r", - "spocc", - "r-package", - "ggplot", - "interactive", - "maps", - "occurrences", - "geospatial" + "docker", + "scalereprod" ] }, { - "uid": "github/ropensci/rusda", - "url": "https://github.com/ropensci/rusda", - "rel": "/software/repository/github/ropensci/rusda", + "uid": "github/ropensci/cleanEHR", + "url": "https://github.com/ropensci/cleanEHR", + "rel": "/software/repository/github/ropensci/cleanEHR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to USDA Databases", + "description": "Essential tools and utility functions to facilitate the data processing pipeline, data cleaning and data analysing of clinical data from CC-HIC", "topics": [ + "electronic-health-record", + "healthcare", + "big-data", + "critical-care", + "intensive-care", "r", "rstats", "r-package", - "data-access" + "data-extraction" ] }, { - "uid": "github/ropensci/jsonvalidate", - "url": "https://github.com/ropensci/jsonvalidate", - "rel": "/software/repository/github/ropensci/jsonvalidate", + "uid": "github/ropensci/spocc", + "url": "https://github.com/ropensci/spocc", + "rel": "/software/repository/github/ropensci/spocc", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":heavy_check_mark::interrobang: Validate JSON", + "description": "Species occurrence data toolkit for R", "topics": [ - "r", + "gbif", + "vertnet", + "ecoengine", + "antweb", + "ebird", + "data", + "api", "rstats", - "jsonvalidate", - "json", - "json-validation", + "r", + "species", + "inaturalist", + "idigbio", + "obis", + "bison", + "species-occurrence", + "occurrence", + "spocc", "r-package", - "scalereprod" + "ALA", + "API", + "BISON", + "eBird", + "GBIF", + "iDigBio", + "INAT", + "OBIS", + "occurrences", + "specimens", + "taxonomy", + "Vertnet", + "web-services", + "data-access" ] }, { - "uid": "github/ropensci/rinat", - "url": "https://github.com/ropensci/rinat", - "rel": "/software/repository/github/ropensci/rinat", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A programmatic interface to iNaturalist", + "uid": "github/ropensci/opentripplanner", + "url": "https://github.com/ropensci/opentripplanner", + "rel": "/software/repository/github/ropensci/opentripplanner", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "An API wrapper for OpenTripPlanner (OTP) as an R package", "topics": [ "r", - "rstats", - "spocc", - "inaturalist", - "r-package", - "data-access" + "transport", + "data", + "routing", + "opentripplanner", + "public-transport", + "transportation-planning", + "otp", + "java", + "isochrones" ] }, { - "uid": "github/ropensci/unifir", - "url": "https://github.com/ropensci/unifir", - "rel": "/software/repository/github/ropensci/unifir", + "uid": "github/ropensci/MODIStsp", + "url": "https://github.com/ropensci/MODIStsp", + "rel": "/software/repository/github/ropensci/MODIStsp", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A unifying interface for calling Unity from R", + "description": "An \"R\" package for automatic download and preprocessing of MODIS Land Products Time Series", "topics": [ - "rstats", - "cran", - "cran-r", + "modis", + "gdal", "r", - "unifir", - "visualization", - "unity", - "unity3d" + "preprocessing", + "time-series", + "remote-sensing", + "satellite-imagery", + "modis-data", + "modis-land-products", + "peer-reviewed", + "r-package", + "rstats", + "data-access" ] }, { - "uid": "github/ropensci/cyphr", - "url": "https://github.com/ropensci/cyphr", - "rel": "/software/repository/github/ropensci/cyphr", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":shipit: Humane encryption", + "uid": "github/ropensci/rentrez", + "url": "https://github.com/ropensci/rentrez", + "rel": "/software/repository/github/ropensci/rentrez", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "talk with NCBI entrez using R", "topics": [ - "encryption", - "sodium", - "openssl", "r", "rstats", - "r-package", - "peer-reviewed", - "security" + "r-package" ] }, { - "uid": "github/ropensci/AntWeb", - "url": "https://github.com/ropensci/AntWeb", - "rel": "/software/repository/github/ropensci/AntWeb", + "uid": "github/ropensci/rerddap", + "url": "https://github.com/ropensci/rerddap", + "rel": "/software/repository/github/ropensci/rerddap", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R wrapper for the AntWeb API", + "description": "R client for working with ERDDAP servers", "topics": [ - "antweb", - "antweb-api", - "specimen-records", - "r", "rstats", - "spocc", + "erddap", + "noaa-data", + "api-client", + "r", "r-package", + "buoy", + "climate", + "earth", + "NOAA", + "precipitation", + "science", + "storm", + "temperature", "data-access" ] }, { - "uid": "github/ropensci/wdman", - "url": "https://github.com/ropensci/wdman", - "rel": "/software/repository/github/ropensci/wdman", + "uid": "github/ropensci/rnoaa", + "url": "https://github.com/ropensci/rnoaa", + "rel": "/software/repository/github/ropensci/rnoaa", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Webdriver/Selenium Binary Manager", + "description": "R interface to many NOAA data APIs", "topics": [ + "noaa", + "climate", + "rstats", + "noaa-data", "r", - "selenium", - "webdriver", - "webdriver-manager", - "rselenium", "r-package", - "rstats", - "http-tools" + "buoy", + "earth", + "ISD", + "NCDC", + "NOAA", + "precipitation", + "science", + "seaice", + "storm", + "temperature", + "tornadoe", + "data-access" ] }, { - "uid": "github/ropensci/taxlist", - "url": "https://github.com/ropensci/taxlist", - "rel": "/software/repository/github/ropensci/taxlist", + "uid": "github/ropensci/qualtRics", + "url": "https://github.com/ropensci/qualtRics", + "rel": "/software/repository/github/ropensci/qualtRics", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Handling taxonomic lists", + "description": "Download \u2b07\ufe0f Qualtrics survey data directly into R!", "topics": [ - "taxonomy" + "qualtrics", + "qualtrics-api", + "survey", + "r", + "r-package", + "api", + "rstats", + "survey-data", + "data-access" ] }, { - "uid": "github/ropensci/outsider.base", - "url": "https://github.com/ropensci/outsider.base", - "rel": "/software/repository/github/ropensci/outsider.base", + "uid": "github/ropensci/mregions", + "url": "https://github.com/ropensci/mregions", + "rel": "/software/repository/github/ropensci/mregions", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Base package for `outsider`", + "description": "MarineRegions R client", "topics": [ - "scalereprod" + "rstats", + "r", + "marine", + "spatial", + "r-package", + "peer-reviewed", + "geospatial" ] }, { - "uid": "github/ropensci/chromer", - "url": "https://github.com/ropensci/chromer", - "rel": "/software/repository/github/ropensci/chromer", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "package for interacting with the chromosome counts database (CCDB) at http://ccdb.tau.ac.il", + "uid": "github/ropensci/UCSCXenaTools", + "url": "https://github.com/ropensci/UCSCXenaTools", + "rel": "/software/repository/github/ropensci/UCSCXenaTools", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": ":package: An R package for accessing genomics data from UCSC Xena platform, from cancer multi-omics to single-cell RNA-seq https://cran.r-project.org/web/packages/UCSCXenaTools/", "topics": [ + "ucsc-xena", + "downloader", + "api-client", + "tcga", + "ccle", + "icgc", + "ucsc", + "toil", + "treehouse", "r", - "rstats", - "r-package", - "data-access" + "bioinformatics" ] }, { - "uid": "github/ropensci/ijtiff", - "url": "https://github.com/ropensci/ijtiff", - "rel": "/software/repository/github/ropensci/ijtiff", + "uid": "github/ropensci/stplanr", + "url": "https://github.com/ropensci/stplanr", + "rel": "/software/repository/github/ropensci/stplanr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R Package for general purpose TIFF file I/O which plays nice with ImageJ", + "description": "Sustainable transport planning with R", "topics": [ "r", + "transport", + "spatial", "rstats", - "tiff-files", - "imagej", - "tiff-images", - "image-manipulation", "r-package", "peer-reviewed", - "image-processing" + "transport-planning", + "walking", + "cycling", + "pubic-transport", + "origin-destination", + "desire-lines", + "routes", + "routing", + "route-network", + "transportation", + "cycle", + "data-access" ] }, { - "uid": "github/ropensci/tacmagic", - "url": "https://github.com/ropensci/tacmagic", - "rel": "/software/repository/github/ropensci/tacmagic", + "uid": "github/ropensci/beastier", + "url": "https://github.com/ropensci/beastier", + "rel": "/software/repository/github/ropensci/beastier", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "tacmagic: PET Analysis in R", + "description": "R package to run BEAST2", "topics": [ - "positron-emission-tomography", - "pet", - "pet-mr", - "neuroimaging", "r", - "statistics", - "positron", - "mri", - "neuroscience", - "neuroscience-methods", - "data-extraction" + "r-package", + "rstats", + "scalereprod" ] }, { - "uid": "github/ropensci/gitignore", - "url": "https://github.com/ropensci/gitignore", - "rel": "/software/repository/github/ropensci/gitignore", + "uid": "github/ropensci/bowerbird", + "url": "https://github.com/ropensci/bowerbird", + "rel": "/software/repository/github/ropensci/bowerbird", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A R interface to fetch gitignore templates form gitignore.io", + "description": "Keep a collection of sparkly data resources", "topics": [ + "r", + "rstats", + "r-package", + "peer-reviewed", + "Antarctic", + "climate", + "data", + "environmental", + "ropensci", + "satellite", + "SouthernOcean", "scalereprod" ] }, { - "uid": "github/ropensci/osfr", - "url": "https://github.com/ropensci/osfr", - "rel": "/software/repository/github/ropensci/osfr", + "uid": "github/ropensci/MODISTools", + "url": "https://github.com/ropensci/MODISTools", + "rel": "/software/repository/github/ropensci/MODISTools", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the Open Science Framework (OSF)", + "description": "Interface to the MODIS Land Products Subsets Web Services", "topics": [ - "osf", - "open-science", - "reproducible-research", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/bold", - "url": "https://github.com/ropensci/bold", - "rel": "/software/repository/github/ropensci/bold", + "uid": "github/ropensci/rtika", + "url": "https://github.com/ropensci/rtika", + "rel": "/software/repository/github/ropensci/rtika", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to the Bold Systems barcode webservice", + "description": "R Interface to Apache Tika", "topics": [ - "api-wrapper", - "barcodes", - "sequences", "r", "rstats", "r-package", - "taxize", - "barcode", - "biodiversity", - "DNA", - "fasta", - "data-access" - ] - }, - { - "uid": "github/ropensci/allodb", - "url": "https://github.com/ropensci/allodb", - "rel": "/software/repository/github/ropensci/allodb", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package for biomass estimation at extratropical forest plots.", - "topics": [ - "data-extraction" + "peer-reviewed", + "tika", + "extract-metadata", + "extract-text", + "pdf-files", + "parse", + "java", + "tesseract", + "literature" ] }, { - "uid": "github/ropensci/tracerer", - "url": "https://github.com/ropensci/tracerer", - "rel": "/software/repository/github/ropensci/tracerer", + "uid": "github/ropensci/datapack", + "url": "https://github.com/ropensci/datapack", + "rel": "/software/repository/github/ropensci/datapack", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "tracerer, 'Tracer for R', is an R package to work with the output of BEAST2", + "description": "An R package to handle data packages", "topics": [ "r", - "r-package", "rstats", + "r-package", "scalereprod" ] }, { - "uid": "github/ropensci/internetarchive", - "url": "https://github.com/ropensci/internetarchive", - "rel": "/software/repository/github/ropensci/internetarchive", + "uid": "github/ropensci/outsider.base", + "url": "https://github.com/ropensci/outsider.base", + "rel": "/software/repository/github/ropensci/outsider.base", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Search the Internet Archive, retrieve metadata, and download files", + "description": "Base package for `outsider`", "topics": [ - "r", - "rstats", - "r-package", - "data-access" + "scalereprod" ] }, { - "uid": "github/ropensci/historydata", - "url": "https://github.com/ropensci/historydata", - "rel": "/software/repository/github/ropensci/historydata", + "uid": "github/ropensci/git2rdata", + "url": "https://github.com/ropensci/git2rdata", + "rel": "/software/repository/github/ropensci/git2rdata", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Datasets for Historians", + "description": "An R package for storing and retrieving data.frames in git repositories.", "topics": [ "r", "rstats", "r-package", - "data-access" + "version-control", + "reproducible-research", + "data-extraction" ] }, { - "uid": "github/ropensci/dataspice", - "url": "https://github.com/ropensci/dataspice", - "rel": "/software/repository/github/ropensci/dataspice", + "uid": "github/ropensci/Rpolyhedra", + "url": "https://github.com/ropensci/Rpolyhedra", + "rel": "/software/repository/github/ropensci/Rpolyhedra", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":hot_pepper: Create lightweight schema.org descriptions of your datasets", + "description": "A polyhedra database scraped from public available sources using R6 (OOP) and 'rgl' visualizing capabilities. ", "topics": [ - "unconf18", - "schema-org", - "metadata", - "data", - "dataset", - "r", - "r-package", - "rstats", - "unconf", - "data-publication" + "polyhedra-database", + "geometry", + "rgl", + "data-extraction" ] }, { - "uid": "github/ropensci/nbaR", - "url": "https://github.com/ropensci/nbaR", - "rel": "/software/repository/github/ropensci/nbaR", + "uid": "github/ropensci/essurvey", + "url": "https://github.com/ropensci/essurvey", + "rel": "/software/repository/github/ropensci/essurvey", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client library for the Netherlands Biodiversity Api (NBA)", + "description": "Download data from the European Social Survey", "topics": [ + "ess", "r", - "biodiversity-data", - "api-client", + "rstats", + "r-package", "data-access" ] }, { - "uid": "github/ropensci/rcrossref", - "url": "https://github.com/ropensci/rcrossref", - "rel": "/software/repository/github/ropensci/rcrossref", + "uid": "github/ropensci/spelling", + "url": "https://github.com/ropensci/spelling", + "rel": "/software/repository/github/ropensci/spelling", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for various CrossRef APIs", + "description": "Tools for Spell Checking in R", "topics": [ - "crossref-api", - "doi", - "metadata", - "api", + "spell-check", + "spell-checker", "r", "rstats", - "api-wrapper", + "spelling", + "spellcheck", + "spellchecker", "r-package", - "citations", - "Crossref", - "full-text", - "literature", - "pdf", - "publications", - "TDM", - "text-ming", - "xml", - "literature" + "data-extraction" ] }, { - "uid": "github/ropensci/av", - "url": "https://github.com/ropensci/av", - "rel": "/software/repository/github/ropensci/av", + "uid": "github/ropensci/jenkins", + "url": "https://github.com/ropensci/jenkins", + "rel": "/software/repository/github/ropensci/jenkins", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Working with Video in R", + "description": "Simple Jenkins client for R", "topics": [ - "r", - "r-package", - "rstats", - "image-processing" + "scalereprod" ] }, { - "uid": "github/ropensci/katex", - "url": "https://github.com/ropensci/katex", - "rel": "/software/repository/github/ropensci/katex", + "uid": "github/ropensci/dataaimsr", + "url": "https://github.com/ropensci/dataaimsr", + "rel": "/software/repository/github/ropensci/dataaimsr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Server side math to html rendering in R", + "description": "Australian Institute of Marine Science (AIMS) Data Platform API Client which provides easy access to AIMS Data Platform scientific data and information.", "topics": [ - "literature" + "aims", + "data", + "monitoring", + "weather", + "sst", + "australia", + "marine" ] }, { - "uid": "github/ropensci/DataPackageR", - "url": "https://github.com/ropensci/DataPackageR", - "rel": "/software/repository/github/ropensci/DataPackageR", + "uid": "github/ropensci/tokenizers", + "url": "https://github.com/ropensci/tokenizers", + "rel": "/software/repository/github/ropensci/tokenizers", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package to enable reproducible data processing, packaging and sharing.", + "description": "Fast, Consistent Tokenization of Natural Language Text", "topics": [ + "text-mining", + "tokenizer", + "rstats", + "nlp", "r", "r-package", - "reproducibility", - "rstats", "peer-reviewed", "scalereprod" ] }, { - "uid": "github/ropensci/babette", - "url": "https://github.com/ropensci/babette", - "rel": "/software/repository/github/ropensci/babette", + "uid": "github/ropensci/visdat", + "url": "https://github.com/ropensci/visdat", + "rel": "/software/repository/github/ropensci/visdat", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "babette is an R package to work with BEAST2", + "description": "Preliminary Exploratory Visualisation of Data", "topics": [ + "missingness", + "visualisation", "r", + "exploratory-data-analysis", + "ropensci", "r-package", "rstats", - "phylogenetics", - "beast2", - "bayesian-inference", - "scalereprod" + "peer-reviewed", + "data-visualization" ] }, { - "uid": "github/ropensci/weatherOz", - "url": "https://github.com/ropensci/weatherOz", - "rel": "/software/repository/github/ropensci/weatherOz", + "uid": "github/ropensci/internetarchive", + "url": "https://github.com/ropensci/internetarchive", + "rel": "/software/repository/github/ropensci/internetarchive", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An API Client for Australian Weather and Climate Data Resources", + "description": "Search the Internet Archive, retrieve metadata, and download files", "topics": [ - "australia", + "r", "rstats", - "weather", - "climate", - "api-client", - "data", - "weather-api", - "weather-forecast", - "rainfall", - "r" + "r-package", + "data-access" ] }, { @@ -5043,640 +5016,541 @@ ] }, { - "uid": "github/ropensci/rgbif", - "url": "https://github.com/ropensci/rgbif", - "rel": "/software/repository/github/ropensci/rgbif", + "uid": "github/ropensci/ijtiff", + "url": "https://github.com/ropensci/ijtiff", + "rel": "/software/repository/github/ropensci/ijtiff", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to the Global Biodiversity Information Facility API", + "description": "An R Package for general purpose TIFF file I/O which plays nice with ImageJ", "topics": [ - "gbif", - "api", - "data", - "biodiversity", - "species", - "rstats", "r", - "spocc", - "r-package", - "lifewatch", - "oscibio", - "API", - "GBIF", - "occurrences", - "specimens", - "taxonomy", - "web-services", - "data-access" - ] - }, - { - "uid": "github/ropensci/charlatan", - "url": "https://github.com/ropensci/charlatan", - "rel": "/software/repository/github/ropensci/charlatan", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Create fake data in R", - "topics": [ - "data", - "faker", "rstats", - "dataset", - "fake-data", - "r", + "tiff-files", + "imagej", + "tiff-images", + "image-manipulation", "r-package", "peer-reviewed", - "scalereprod" + "image-processing" ] }, { - "uid": "github/ropensci/rredlist", - "url": "https://github.com/ropensci/rredlist", - "rel": "/software/repository/github/ropensci/rredlist", + "uid": "github/ropensci/opencontext", + "url": "https://github.com/ropensci/opencontext", + "rel": "/software/repository/github/ropensci/opencontext", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "IUCN Red List API Client", + "description": "API Client for the Open Context Archeological Database", "topics": [ - "conservation", - "api-wrapper", - "biodiversity", - "rstats", - "iucn-red-list", - "iucn", "r", + "rstats", "r-package", - "taxize", - "API", - "habitat", - "IUCN", - "species", - "traits", - "web-services", "data-access" ] }, { - "uid": "github/ropensci/robotstxt", - "url": "https://github.com/ropensci/robotstxt", - "rel": "/software/repository/github/ropensci/robotstxt", + "uid": "github/ropensci/cyphr", + "url": "https://github.com/ropensci/cyphr", + "rel": "/software/repository/github/ropensci/cyphr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "robots.txt file parsing and checking for R", + "description": ":shipit: Humane encryption", "topics": [ - "robotstxt", - "crawler", - "webscraping", - "spider", - "scraper", + "encryption", + "sodium", + "openssl", "r", "rstats", "r-package", "peer-reviewed", - "http-tools" + "security" ] }, { - "uid": "github/ropensci/ecoengine", - "url": "https://github.com/ropensci/ecoengine", - "rel": "/software/repository/github/ropensci/ecoengine", + "uid": "github/ropensci/PostcodesioR", + "url": "https://github.com/ropensci/PostcodesioR", + "rel": "/software/repository/github/ropensci/PostcodesioR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Programmatic interface to the Berkeley Ecoinformatics Engine ", + "description": "API wrapper around postcodes.io - free UK postcode lookup and geocoder", "topics": [ "r", + "api-wrapper", + "geocoder", + "postcode", + "uk", + "geographic-data", "rstats", - "ecoengine", - "berkeley-ecoinformatics-engine", - "spocc", "r-package", - "data-access" + "peer-reviewed", + "geospatial" ] }, { - "uid": "github/ropensci/rppo", - "url": "https://github.com/ropensci/rppo", - "rel": "/software/repository/github/ropensci/rppo", + "uid": "github/ropensci/opencage", + "url": "https://github.com/ropensci/opencage", + "rel": "/software/repository/github/ropensci/opencage", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for accessing PPO data store", + "description": ":globe_with_meridians: R package for the OpenCage API -- both forward and reverse geocoding :globe_with_meridians:", "topics": [ + "rstats", + "rspatial", + "geocode", + "opencage-geocoder", "r", + "opencage-api", + "opencage", + "geocoder", + "placenames", "r-package", - "rstats", "peer-reviewed", - "data-access" + "geospatial" ] }, { - "uid": "github/ropensci/emld", - "url": "https://github.com/ropensci/emld", - "rel": "/software/repository/github/ropensci/emld", + "uid": "github/ropensci/hydroscoper", + "url": "https://github.com/ropensci/hydroscoper", + "rel": "/software/repository/github/ropensci/hydroscoper", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: JSON-LD representation of EML", + "description": "R interface to the Greek National Data Bank for Hydrometeorological Information", "topics": [ - "data-extraction" + "climate", + "hydroscope", + "hydrometeorology", + "hydrology", + "tidy-data", + "time-series", + "greece", + "water-resources", + "meteorological-stations", + "meteorological-data", + "r", + "rstats", + "r-package", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/gtexr", - "url": "https://github.com/ropensci/gtexr", - "rel": "/software/repository/github/ropensci/gtexr", + "uid": "github/ropensci/rgpdd", + "url": "https://github.com/ropensci/rgpdd", + "rel": "/software/repository/github/ropensci/rgpdd", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R interface to the GTEx Portal API", + "description": "Interface to the Global Population Dynamics Database, http://www3.imperial.ac.uk/cpb/databases/gpdd", "topics": [ - "api-wrapper", - "bioinformatics", - "gtex", "r", - "eqtl", - "sqtl" + "rstats", + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/epubr", - "url": "https://github.com/ropensci/epubr", - "rel": "/software/repository/github/ropensci/epubr", + "uid": "github/ropensci/AntWeb", + "url": "https://github.com/ropensci/AntWeb", + "rel": "/software/repository/github/ropensci/AntWeb", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Read EPUB files in R", + "description": "An R wrapper for the AntWeb API", "topics": [ - "epub-files", + "antweb", + "antweb-api", + "specimen-records", "r", "rstats", + "spocc", "r-package", - "epub", - "epub-format", - "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/tif", - "url": "https://github.com/ropensci/tif", - "rel": "/software/repository/github/ropensci/tif", + "uid": "github/ropensci/tiler", + "url": "https://github.com/ropensci/tiler", + "rel": "/software/repository/github/ropensci/tiler", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Text Interchange Formats", + "description": "Generate geographic and non-geographic map tiles from R", "topics": [ - "text-processing", - "corpus", - "term-frequency", - "tokenizer", - "natural-language-processing", - "r-package", "r", + "r-package", "rstats", - "literature" + "geospatial" ] }, { - "uid": "github/ropensci/qpdf", - "url": "https://github.com/ropensci/qpdf", - "rel": "/software/repository/github/ropensci/qpdf", + "uid": "github/ropensci/camsRad", + "url": "https://github.com/ropensci/camsRad", + "rel": "/software/repository/github/ropensci/camsRad", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Split, Combine and Compress PDF files", + "description": "R Client for CAMS Radiation Service", "topics": [ "r", "r-package", "rstats", - "literature" + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/rrricanes", - "url": "https://github.com/ropensci/rrricanes", - "rel": "/software/repository/github/ropensci/rrricanes", + "uid": "github/ropensci/ritis", + "url": "https://github.com/ropensci/ritis", + "rel": "/software/repository/github/ropensci/ritis", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Web scraper for Atlantic and east Pacific hurricanes and tropical storms", + "description": "Integrated Taxonomic Information Service (ITIS) R client", "topics": [ - "r", - "hurricane", - "weather", + "api-wrapper", + "itis", + "taxonomy", "rstats", + "r", "r-package", - "peer-reviewed", - "data-access" + "taxize", + "API", + "api-client", + "biology", + "identifiers", + "JSON", + "names", + "nomenclature", + "species", + "web" ] }, { - "uid": "github/ropensci/opencv", - "url": "https://github.com/ropensci/opencv", - "rel": "/software/repository/github/ropensci/opencv", + "uid": "github/ropensci/rdefra", + "url": "https://github.com/ropensci/rdefra", + "rel": "/software/repository/github/ropensci/rdefra", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R bindings for OpenCV", + "description": "rdefra: Interact with the UK AIR Pollution Database from DEFRA", "topics": [ - "unconf18", - "opencv", - "opencv-library", "r", - "r-package", "rstats", - "unconf", - "image-processing" + "r-package", + "uk", + "defra", + "air-pollution", + "air-quality", + "air-pollution-levels", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/refsplitr", - "url": "https://github.com/ropensci/refsplitr", - "rel": "/software/repository/github/ropensci/refsplitr", + "uid": "github/ropensci/rglobi", + "url": "https://github.com/ropensci/rglobi", + "rel": "/software/repository/github/ropensci/rglobi", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for processing, organizing, and visualizing reference records downloaded from the Web of Science. ", + "description": "R library to access species interaction data of http://globalbioticinteractions.org", "topics": [ - "bibliometrics", - "coauthorship", - "collaboration", - "georeferencing", - "metascience", - "namedisambiguation", - "references", - "scienceofscience", - "scientometrics", - "WebofScience", - "literature" + "r", + "rstats", + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/beautier", - "url": "https://github.com/ropensci/beautier", - "rel": "/software/repository/github/ropensci/beautier", + "uid": "github/ropensci/wateRinfo", + "url": "https://github.com/ropensci/wateRinfo", + "rel": "/software/repository/github/ropensci/wateRinfo", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to generate the same BEAST2 XML parameter files as generated by BEAUti 2", + "description": "R package to download time series data from waterinfo.be", "topics": [ "r", + "package", + "api", + "ropensci", + "open-science", + "water", + "weather", + "climate", "r-package", "rstats", - "scalereprod" + "lifewatch", + "oscibio", + "data-access" ] }, { - "uid": "github/ropensci/magick", - "url": "https://github.com/ropensci/magick", - "rel": "/software/repository/github/ropensci/magick", + "uid": "github/ropensci/EndoMineR", + "url": "https://github.com/ropensci/EndoMineR", + "rel": "/software/repository/github/ropensci/EndoMineR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Magic, madness, heaven, sin", + "description": "Endoscopic and Pathological data extraction for various endo-pathological data extraction", "topics": [ - "magick", - "imagemagick-wrapper", - "image-processing", - "image-manipulation", "r", "rstats", - "image-magick", - "imagemagick", - "r-package" + "endoscopy", + "gastroenterology", + "semi-structured-data", + "text-mining", + "r-package", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/rdhs", - "url": "https://github.com/ropensci/rdhs", - "rel": "/software/repository/github/ropensci/rdhs", + "uid": "github/ropensci/suppdata", + "url": "https://github.com/ropensci/suppdata", + "rel": "/software/repository/github/ropensci/suppdata", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "API Client and Data Munging for the Demographic and Health Survey Data", + "description": "Grabbing SUPPlementary DATA in R", "topics": [ - "dataset", - "survey-data", - "dhs", - "extract", - "dhs-api", - "peer-reviewed", "r", - "r-package", "rstats", + "r-package", + "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/exoplanets", - "url": "https://github.com/ropensci/exoplanets", - "rel": "/software/repository/github/ropensci/exoplanets", + "uid": "github/ropensci/c3dr", + "url": "https://github.com/ropensci/c3dr", + "rel": "/software/repository/github/ropensci/c3dr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":earth_americas: Provides access to NASA's Exoplanet Archive", + "description": "Read and write C3D motion capture data in R", "topics": [ - "rstats", - "nasa", - "exoplanets", - "api", - "data-access" + "r", + "r-package", + "r-stats" ] }, { - "uid": "github/ropensci/ghql", - "url": "https://github.com/ropensci/ghql", - "rel": "/software/repository/github/ropensci/ghql", + "uid": "github/ropensci/ruODK", + "url": "https://github.com/ropensci/ruODK", + "rel": "/software/repository/github/ropensci/ruODK", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "GraphQL R client", + "description": "ruODK: An R Client for the ODK Central API", "topics": [ - "graphql", - "graphql-client", + "opendatakit", + "odata", + "odata-client", + "odk", + "odk-central", "rstats", - "r", - "graphql-api", "r-package", - "API", - "curl", + "api", "data", - "GraphQL", - "http", - "web-services", - "http-tools" + "database", + "dataset", + "open-data", + "scalereprod" ] }, { - "uid": "github/ropensci/treedata.table", - "url": "https://github.com/ropensci/treedata.table", - "rel": "/software/repository/github/ropensci/treedata.table", + "uid": "github/ropensci/allodb", + "url": "https://github.com/ropensci/allodb", + "rel": "/software/repository/github/ropensci/allodb", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A wrapper for data.table that enables fast manipulation of phylogenetic trees matched to data.", + "description": "An R package for biomass estimation at extratropical forest plots.", "topics": [ "data-extraction" ] }, { - "uid": "github/ropensci/hunspell", - "url": "https://github.com/ropensci/hunspell", - "rel": "/software/repository/github/ropensci/hunspell", + "uid": "github/ropensci/chromer", + "url": "https://github.com/ropensci/chromer", + "rel": "/software/repository/github/ropensci/chromer", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "High-Performance Stemmer, Tokenizer, and Spell Checker for R", + "description": "package for interacting with the chromosome counts database (CCDB) at http://ccdb.tau.ac.il", "topics": [ - "spellchecker", - "hunspell", - "stemmer", - "tokenizer", - "spell-check", "r", "rstats", "r-package", - "literature" + "data-access" ] }, { - "uid": "github/ropensci/tidync", - "url": "https://github.com/ropensci/tidync", - "rel": "/software/repository/github/ropensci/tidync", + "uid": "github/ropensci/pdftools", + "url": "https://github.com/ropensci/pdftools", + "rel": "/software/repository/github/ropensci/pdftools", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "NetCDF exploration and data extraction", + "description": "Text Extraction, Rendering and Converting of PDF Documents", "topics": [ - "geospatial" + "pdf-format", + "text-extraction", + "poppler-library", + "poppler", + "r", + "rstats", + "pdf-files", + "pdftools", + "r-package", + "literature" ] }, { - "uid": "github/ropensci/essurvey", - "url": "https://github.com/ropensci/essurvey", - "rel": "/software/repository/github/ropensci/essurvey", + "uid": "github/ropensci/codemetar", + "url": "https://github.com/ropensci/codemetar", + "rel": "/software/repository/github/ropensci/codemetar", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Download data from the European Social Survey", + "description": "an R package for generating and working with codemeta", "topics": [ - "ess", + "metadata", + "json-ld", + "codemeta", "r", "rstats", "r-package", - "data-access" + "peer-reviewed", + "citation", + "credit", + "linked-data", + "ropensci", + "data-publication" ] }, { - "uid": "github/ropensci/mcbette", - "url": "https://github.com/ropensci/mcbette", - "rel": "/software/repository/github/ropensci/mcbette", + "uid": "github/ropensci/gtexr", + "url": "https://github.com/ropensci/gtexr", + "rel": "/software/repository/github/ropensci/gtexr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Model Comparison using babette", + "description": "An R interface to the GTEx Portal API", "topics": [ - "scalereprod" + "api-wrapper", + "bioinformatics", + "gtex", + "r", + "eqtl", + "sqtl" ] }, { - "uid": "github/ropensci/rromeo", - "url": "https://github.com/ropensci/rromeo", - "rel": "/software/repository/github/ropensci/rromeo", + "uid": "github/ropensci/pendulum", + "url": "https://github.com/ropensci/pendulum", + "rel": "/software/repository/github/ropensci/pendulum", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: An R client for SHERPA/RoMEO API", + "description": "a date/time replacement pkg for R to facilitate time hacking", "topics": [ "r", - "r-package", "rstats", - "sherpa-romeo", - "api-client", - "literature" + "time-mock", + "mock-time", + "scalereprod" ] }, { - "uid": "github/ropensci/suppdata", - "url": "https://github.com/ropensci/suppdata", - "rel": "/software/repository/github/ropensci/suppdata", + "uid": "github/ropensci/tic", + "url": "https://github.com/ropensci/tic", + "rel": "/software/repository/github/ropensci/tic", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Grabbing SUPPlementary DATA in R", + "description": "Tasks Integrating Continuously: CI-Agnostic Workflow Definitions", "topics": [ "r", - "rstats", - "r-package", - "peer-reviewed", - "data-access" - ] - }, - { - "uid": "github/ropensci/circle", - "url": "https://github.com/ropensci/circle", - "rel": "/software/repository/github/ropensci/circle", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client package for the Circle CI API", - "topics": [ + "travis-ci", + "appveyor", "continuous-integration", - "circle-ci", - "api-client", - "continuous-deployment", - "scalereprod" - ] - }, - { - "uid": "github/ropensci/helminthR", - "url": "https://github.com/ropensci/helminthR", - "rel": "/software/repository/github/ropensci/helminthR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Accesses parasite occurrence records from the London Natural History Museum's Host-Parasite database, which contains over a quarter of a million helminth records.", - "topics": [ - "helminth", - "parasites", - "open-data", - "disease-networks", - "r", - "rstats", - "r-package", - "data-access" - ] - }, - { - "uid": "github/ropensci/googleLanguageR", - "url": "https://github.com/ropensci/googleLanguageR", - "rel": "/software/repository/github/ropensci/googleLanguageR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for the Google Translation API, Google Cloud Natural Language API and Google Cloud Speech API", - "topics": [ - "cloud-speech-api", - "cloud-translation-api", - "translation-api", - "googleauthr", - "google-api-client", - "r", - "rstats", - "google-cloud-speech", - "google-cloud", - "sentiment-analysis", - "google-nlp", - "natural-language-processing", - "speech-api", + "deployment", "r-package", - "peer-reviewed", - "literature" - ] - }, - { - "uid": "github/ropensci/staypuft", - "url": "https://github.com/ropensci/staypuft", - "rel": "/software/repository/github/ropensci/staypuft", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "convert objects to and from R data structures", - "topics": [ - "marshmallow", - "data-structures", - "serialization", - "deserialization", - "validation", - "r", "rstats", - "r-port", - "r-package", - "data", - "schema", - "serlialization", - "types", + "githubactions", "scalereprod" ] }, { - "uid": "github/ropensci/solrium", - "url": "https://github.com/ropensci/solrium", - "rel": "/software/repository/github/ropensci/solrium", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A general purpose R interface to Solr", - "topics": [ - "solr", - "solr-client", - "solr-search", - "rstats", - "database", - "r", - "r-package", - "API", - "JSON", - "search", - "web", - "XML", - "data-access" - ] - }, - { - "uid": "github/ropensci/DoOR.functions", - "url": "https://github.com/ropensci/DoOR.functions", - "rel": "/software/repository/github/ropensci/DoOR.functions", + "uid": "github/ropensci/osmplotr", + "url": "https://github.com/ropensci/osmplotr", + "rel": "/software/repository/github/ropensci/osmplotr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package containing the functions used to build the Database of Odor Responses", + "description": "Data visualisation using OpenStreetMap objects", "topics": [ + "osm", + "openstreetmap", + "overpass-api", + "overpass", + "data-visualisation", + "highlighting-clusters", "r", "rstats", "r-package", "peer-reviewed", - "data-access" + "geospatial" ] }, { - "uid": "github/ropensci/tidyhydat", - "url": "https://github.com/ropensci/tidyhydat", - "rel": "/software/repository/github/ropensci/tidyhydat", + "uid": "github/ropensci/gpg", + "url": "https://github.com/ropensci/gpg", + "rel": "/software/repository/github/ropensci/gpg", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package to import Water Survey of Canada hydrometric data and make it tidy", + "description": "Bindings to gpgme for R", "topics": [ - "r", - "tidy-data", - "government-data", - "water-resources", - "rstats", - "r-package", - "hydrology", - "hydrometrics", - "citz", - "data-access" + "gpgme" ] }, { - "uid": "github/ropensci/hddtools", - "url": "https://github.com/ropensci/hddtools", - "rel": "/software/repository/github/ropensci/hddtools", + "uid": "github/ropensci/rAltmetric", + "url": "https://github.com/ropensci/rAltmetric", + "rel": "/software/repository/github/ropensci/rAltmetric", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Hydrological Data Discovery Tools (R package for hydrology and open data)", + "description": "Query and visualize metrics from altmetric.com", "topics": [ + "altmetrics", "r", + "citations", + "bibliometrics", "rstats", "r-package", - "hydrology", - "sepa", - "precipitation", - "mopex", - "data60uk", - "grdc", - "kgclimateclass", - "peer-reviewed", - "data-access" + "literature" ] }, { - "uid": "github/ropensci/rebird", - "url": "https://github.com/ropensci/rebird", - "rel": "/software/repository/github/ropensci/rebird", + "uid": "github/ropensci/mapr", + "url": "https://github.com/ropensci/mapr", + "rel": "/software/repository/github/ropensci/mapr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Wrapper to the eBird API", + "description": "Map species occurrence data", "topics": [ - "ebird", "rstats", - "birds", - "ebird-api", + "ggplot2", + "leaflet", + "map", + "mapping", + "biodiversity", "r", - "ebird-webservices", "spocc", "r-package", - "biology", - "birding", - "data", - "database", - "observations", - "ornithology", - "sightings", - "data-access" + "ggplot", + "interactive", + "maps", + "occurrences", + "geospatial" ] }, { - "uid": "github/ropensci/qualtRics", - "url": "https://github.com/ropensci/qualtRics", - "rel": "/software/repository/github/ropensci/qualtRics", + "uid": "github/ropensci/lightr", + "url": "https://github.com/ropensci/lightr", + "rel": "/software/repository/github/ropensci/lightr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Download \u2b07\ufe0f Qualtrics survey data directly into R!", + "description": "Import spectral data and related metadata in R", "topics": [ - "qualtrics", - "qualtrics-api", - "survey", "r", + "spectroscopy", + "spectral-data", + "reproducible-research", + "reproducible-science", + "reproducibility", "r-package", - "api", - "rstats", - "survey-data", - "data-access" + "file-import", + "data-extraction" ] }, { - "uid": "github/ropensci/cld2", - "url": "https://github.com/ropensci/cld2", - "rel": "/software/repository/github/ropensci/cld2", + "uid": "github/ropensci/nasapower", + "url": "https://github.com/ropensci/nasapower", + "rel": "/software/repository/github/ropensci/nasapower", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Wrapper for Google's Compact Language Detector 2", + "description": "API Client for NASA POWER Global Meteorology, Surface Solar Energy and Climatology in R", "topics": [ - "cld", - "cld2", - "language-detection", - "language-detector", + "agroclimatology", + "weather", "r", + "nasa-power", + "nasa", + "agroclimatology-data", + "weather-variables", + "weather-data", + "earth-science", "rstats", + "data-access", "r-package", - "literature" + "climate-data", + "global", + "meteorological-data", + "meteorology", + "NASA", + "NASA-POWER" ] }, { @@ -5723,398 +5597,411 @@ ] }, { - "uid": "github/ropensci/tic", - "url": "https://github.com/ropensci/tic", - "rel": "/software/repository/github/ropensci/tic", + "uid": "github/ropensci/spatsoc", + "url": "https://github.com/ropensci/spatsoc", + "rel": "/software/repository/github/ropensci/spatsoc", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Tasks Integrating Continuously: CI-Agnostic Workflow Definitions", + "description": ":package: spatsoc is an R package for detecting spatial and temporal groups in GPS relocations. ", "topics": [ "r", - "travis-ci", - "appveyor", - "continuous-integration", - "deployment", + "spatial", + "social", + "gps", + "animal", + "network", "r-package", "rstats", - "githubactions", - "scalereprod" + "geospatial" ] }, { - "uid": "github/ropensci/gtfsr", - "url": "https://github.com/ropensci/gtfsr", - "rel": "/software/repository/github/ropensci/gtfsr", + "uid": "github/ropensci/phylotaR", + "url": "https://github.com/ropensci/phylotaR", + "rel": "/software/repository/github/ropensci/phylotaR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Package for obtaining, validating, viewing, and storing GTFS (transit) data", + "description": "An automated pipeline for retrieving orthologous DNA sequences from GenBank in R", "topics": [ + "sequence-alignment", + "blastn", + "phylogenetics", "r", - "rstats", - "r-package", + "genbank", "peer-reviewed", + "r-package", + "rstats", "data-access" ] }, { - "uid": "github/ropensci/namext", - "url": "https://github.com/ropensci/namext", - "rel": "/software/repository/github/ropensci/namext", + "uid": "github/ropensci/timefuzz", + "url": "https://github.com/ropensci/timefuzz", + "rel": "/software/repository/github/ropensci/timefuzz", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "extract scientific names from papers/articles/text using gnfinder (https://github.com/gnames/gnfinder)", + "description": "Time Travel to Test Time Dependent Code", "topics": [ "r", "rstats", - "taxonomy" + "testing", + "tdd", + "time-dependent", + "r-package", + "scalereprod" ] }, { - "uid": "github/ropensci/excluder", - "url": "https://github.com/ropensci/excluder", - "rel": "/software/repository/github/ropensci/excluder", + "uid": "github/ropensci/bikedata", + "url": "https://github.com/ropensci/bikedata", + "rel": "/software/repository/github/ropensci/bikedata", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Checks for Exclusion Criteria in Online Data", + "description": ":bike: Extract data from public hire bicycle systems", "topics": [ - "qualtrics", - "mturk", - "datacleaning", - "exclusion", + "bicycle-hire-systems", "r", "rstats", + "bike-hire", + "bicycle-hire", + "database", + "bike-data", "r-package", - "data-extraction" + "peer-reviewed", + "bike-hire-systems", + "data-access" ] }, { - "uid": "github/ropensci/taxview", - "url": "https://github.com/ropensci/taxview", - "rel": "/software/repository/github/ropensci/taxview", + "uid": "github/ropensci/DoOR.data", + "url": "https://github.com/ropensci/DoOR.data", + "rel": "/software/repository/github/ropensci/DoOR.data", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Summarise and visualize data sets wrt taxonomy", + "description": "R package containing the data for the Database of Odor Responses", "topics": [ "r", "rstats", "r-package", - "taxonomy" + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/paleobioDB", - "url": "https://github.com/ropensci/paleobioDB", - "rel": "/software/repository/github/ropensci/paleobioDB", + "uid": "github/ropensci/jsonld", + "url": "https://github.com/ropensci/jsonld", + "rel": "/software/repository/github/ropensci/jsonld", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the Paleobiology Database", + "description": "R wrapper for jsonld.js JavaScript library", "topics": [ + "json-ld", "r", "rstats", "r-package", - "data-access" + "data-extraction" ] }, { - "uid": "github/ropensci/RefManageR", - "url": "https://github.com/ropensci/RefManageR", - "rel": "/software/repository/github/ropensci/RefManageR", + "uid": "github/ropensci/refimpact", + "url": "https://github.com/ropensci/refimpact", + "rel": "/software/repository/github/ropensci/refimpact", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package RefManageR", + "description": "API wrapper for UK Research Excellence Framework 2014 Impact Case Studies Database", "topics": [ + "uk", + "research-funding", + "research-improvement", + "directed-graph", + "directed-graphs", + "text-mining", + "research-policy", "r", "rstats", "r-package", "peer-reviewed", - "scalereprod" + "literature" ] }, { - "uid": "github/ropensci/taxadb", - "url": "https://github.com/ropensci/taxadb", - "rel": "/software/repository/github/ropensci/taxadb", + "uid": "github/ropensci/rromeo", + "url": "https://github.com/ropensci/rromeo", + "rel": "/software/repository/github/ropensci/rromeo", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: Taxonomic Database", + "description": ":package: An R client for SHERPA/RoMEO API", "topics": [ - "taxonomy" + "r", + "r-package", + "rstats", + "sherpa-romeo", + "api-client", + "literature" ] }, { - "uid": "github/ropensci/rcoreoa", - "url": "https://github.com/ropensci/rcoreoa", - "rel": "/software/repository/github/ropensci/rcoreoa", + "uid": "github/ropensci/trufflesniffer", + "url": "https://github.com/ropensci/trufflesniffer", + "rel": "/software/repository/github/ropensci/trufflesniffer", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "CORE API R Client", + "description": "snif out truffles (secrets) [passwords, tokens, api keys]", "topics": [ - "api-wrapper", - "scholarly-metadata", "r", "rstats", + "secrets", "r-package", - "citations", - "full-text", - "literature", - "metadata", - "pdf", - "publications", - "text-ming", - "data-access" + "truffle", + "http-tools" ] }, { - "uid": "github/ropensci/bibtex", - "url": "https://github.com/ropensci/bibtex", - "rel": "/software/repository/github/ropensci/bibtex", + "uid": "github/ropensci/randgeo", + "url": "https://github.com/ropensci/randgeo", + "rel": "/software/repository/github/ropensci/randgeo", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "bibtex parser for R", + "description": "random WKT or GeoJSON", "topics": [ - "bibtex", - "parser", + "geojson", + "wkt", + "rstats", "r", - "literature" + "r-package", + "geospatial" ] }, { - "uid": "github/ropensci/ssh", - "url": "https://github.com/ropensci/ssh", - "rel": "/software/repository/github/ropensci/ssh", + "uid": "github/ropensci/virtuoso", + "url": "https://github.com/ropensci/virtuoso", + "rel": "/software/repository/github/ropensci/virtuoso", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Native SSH client in R based on libssh", + "description": ":package: Interact with Virtuoso Open Source database instances from R", + "topics": [ + "databases" + ] + }, + { + "uid": "github/ropensci/nodbi", + "url": "https://github.com/ropensci/nodbi", + "rel": "/software/repository/github/ropensci/nodbi", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Document DBI connector for R", "topics": [ - "libssh", - "ssh", - "ssh-client", - "r", "rstats", + "database", + "nosql", + "couchdb", + "mongodb", + "elasticsearch", + "r", "r-package", - "security" + "sqlite", + "CouchDB", + "documents", + "Elasticsearch", + "JSON", + "MongoDB", + "NoSQL", + "PostgreSQL", + "SQLite", + "databases" ] }, { - "uid": "github/ropensci/assertr", - "url": "https://github.com/ropensci/assertr", - "rel": "/software/repository/github/ropensci/assertr", + "uid": "github/ropensci/comtradr", + "url": "https://github.com/ropensci/comtradr", + "rel": "/software/repository/github/ropensci/comtradr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Assertive programming for R analysis pipelines", + "description": "Functions for Interacting with the UN Comtrade API", "topics": [ - "predicate-functions", - "analysis-pipeline", - "assertions", - "assertion-methods", - "assertion-library", + "comtrade", + "api", + "supply-chain", "r", "rstats", "r-package", "peer-reviewed", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/eia", - "url": "https://github.com/ropensci/eia", - "rel": "/software/repository/github/ropensci/eia", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package wrapping the US Energy Information Administration open data API.", + "uid": "github/ropensci/SymbiotaR2", + "url": "https://github.com/ropensci/SymbiotaR2", + "rel": "/software/repository/github/ropensci/SymbiotaR2", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "SymbiotaR2: an R package for accessing and downloading from Symbiota2 portals", "topics": [ - "eia-api", - "r-package", - "energy-data", - "energy-information-administration", - "open-data", - "eia", - "cran", - "data-access" + "symbiota2-portal", + "database", + "library", + "r", + "symbiota", + "specimen-records", + "symbiota2" ] }, { - "uid": "github/ropensci/webchem", - "url": "https://github.com/ropensci/webchem", - "rel": "/software/repository/github/ropensci/webchem", + "uid": "github/ropensci/gigs", + "url": "https://github.com/ropensci/gigs", + "rel": "/software/repository/github/ropensci/gigs", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Chemical Information from the Web", + "description": "Convert between measurements and z-scores/percentiles for INTERGROWTH-21st and WHO Child Growth Standards, and classify growth patterns.", "topics": [ - "rstats", - "ropensci", - "chemical-information", - "webscraping", - "cas-number", - "chemspider", - "identifier", + "growth-standards", + "anthropometry", + "intergrowth", "r", + "who", "r-package", - "data-access" + "rstats" ] }, { - "uid": "github/ropensci/spocc", - "url": "https://github.com/ropensci/spocc", - "rel": "/software/repository/github/ropensci/spocc", + "uid": "github/ropensci/ramlegacy", + "url": "https://github.com/ropensci/ramlegacy", + "rel": "/software/repository/github/ropensci/ramlegacy", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Species occurrence data toolkit for R", + "description": "R :package: to download, cache and read in different versions of the RAM Legacy Stock Assessment Data Base, an online compilation of stock assessment results for commercially exploited marine populations from around the world.", "topics": [ - "gbif", - "vertnet", - "ecoengine", - "antweb", - "ebird", - "data", - "api", - "rstats", "r", - "species", - "inaturalist", - "idigbio", - "obis", - "bison", - "species-occurrence", - "occurrence", - "spocc", + "rstats", "r-package", - "ALA", - "API", - "BISON", - "eBird", - "GBIF", - "iDigBio", - "INAT", - "OBIS", - "occurrences", - "specimens", - "taxonomy", - "Vertnet", - "web-services", + "ropensci", + "ramlegacy", + "stock-assessment", + "marine-biology", + "fisheries", "data-access" ] }, { - "uid": "github/ropensci/daiquiri", - "url": "https://github.com/ropensci/daiquiri", - "rel": "/software/repository/github/ropensci/daiquiri", + "uid": "github/ropensci/rfigshare", + "url": "https://github.com/ropensci/rfigshare", + "rel": "/software/repository/github/ropensci/rfigshare", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Data quality reporting for temporal datasets.", + "description": "Programmatic interface for Figshare", + "topics": [ + "r", + "rstats", + "r-package", + "archiving", + "data", + "doi", + "repository", + "data-publication" + ] + }, + { + "uid": "github/ropensci/seasl", + "url": "https://github.com/ropensci/seasl", + "rel": "/software/repository/github/ropensci/seasl", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Load CSL styles and locales in R, and inspect contents", "topics": [ - "data-quality", - "initial-data-analysis", "r", "r-package", - "reproducible-research", "rstats", - "temporal-data", - "time-series" + "citeproc", + "citations", + "literature", + "parse", + "style", + "text-ming", + "literature" ] }, { - "uid": "github/ropensci/medrxivr", - "url": "https://github.com/ropensci/medrxivr", - "rel": "/software/repository/github/ropensci/medrxivr", + "uid": "github/ropensci/rtweet", + "url": "https://github.com/ropensci/rtweet", + "rel": "/software/repository/github/ropensci/rtweet", "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "Access and search medRxiv and bioRxiv preprint data", + "description": "\ud83d\udc26 R client for interacting with Twitter's [stream and REST] APIs", "topics": [ - "evidence-synthesis", - "systematic-reviews", - "bibliographic-database", - "rstats", + "rtweet", + "r-rtweet", + "r-twitter", + "twitter", + "twitter-api", + "stream-api", + "rest-api", + "cran", + "tweets", "r-package", "r", - "preprint-records", - "medrxiv-data", - "biorxiv", - "peer-reviewed" + "mkearney-r-package" ] }, { - "uid": "github/ropensci/rsat", - "url": "https://github.com/ropensci/rsat", - "rel": "/software/repository/github/ropensci/rsat", + "uid": "github/ropensci/tidync", + "url": "https://github.com/ropensci/tidync", + "rel": "/software/repository/github/ropensci/tidync", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Dealing with Multiplatform Satellite Images from Landsat, MODIS, and Sentinel ", + "description": "NetCDF exploration and data extraction", "topics": [ - "satellite-images", "geospatial" ] }, { - "uid": "github/ropensci/drake", - "url": "https://github.com/ropensci/drake", - "rel": "/software/repository/github/ropensci/drake", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "An R-focused pipeline toolkit for reproducibility and high-performance computing", + "uid": "github/ropensci/rnpn", + "url": "https://github.com/ropensci/rnpn", + "rel": "/software/repository/github/ropensci/rnpn", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "R client for the National Phenology Network database API", "topics": [ - "reproducibility", - "high-performance-computing", - "r", - "data-science", - "drake", - "makefile", - "pipeline", - "workflow", - "reproducible-research", + "web-api", + "species", + "data", "rstats", + "r", + "national-phenology-network", + "phenology", "r-package", - "ropensci", - "peer-reviewed" + "data-access" ] }, { - "uid": "github/ropensci/rOPTRAM", - "url": "https://github.com/ropensci/rOPTRAM", - "rel": "/software/repository/github/ropensci/rOPTRAM", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Derive Soil Moisture Using the OPTRAM Algorithm", - "topics": [] - }, - { - "uid": "github/ropensci/biomartr", - "url": "https://github.com/ropensci/biomartr", - "rel": "/software/repository/github/ropensci/biomartr", + "uid": "github/ropensci/rnaturalearthhires", + "url": "https://github.com/ropensci/rnaturalearthhires", + "rel": "/software/repository/github/ropensci/rnaturalearthhires", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Genomic Data Retrieval with R", + "description": "high resolution naturalearth data for rnaturalearth", "topics": [ "r", - "genome-retrieval", - "biomart", - "database-retrieval", - "ncbi-genbank", - "genomics", - "ensembl-servers", - "sequenced-genomes", - "proteome", - "genome", - "genome-annotation", - "metagenomics", - "meta-analysis", - "rstats", "r-package", - "peer-reviewed", - "annotation-retrieval", - "biological-data-retrieval", - "BioMart", - "ENSEMBL", - "genomic-data-retrieval", - "NCBI", + "rstats", "data-access" ] }, { - "uid": "github/ropensci/jqr", - "url": "https://github.com/ropensci/jqr", - "rel": "/software/repository/github/ropensci/jqr", + "uid": "github/ropensci/fireexposuR", + "url": "https://github.com/ropensci/fireexposuR", + "rel": "/software/repository/github/ropensci/fireexposuR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to jq ", + "description": "Compute and Visualize Wildfire Exposure", + "topics": [] + }, + { + "uid": "github/ropensci/rrlite", + "url": "https://github.com/ropensci/rrlite", + "rel": "/software/repository/github/ropensci/rrlite", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "R interface to rlite https://github.com/seppo0010/rlite", "topics": [ - "json", - "rstats", - "jq", "r", + "rstats", "r-package", - "data-extraction" + "peer-reviewed", + "databases" ] }, { - "uid": "github/ropensci/onekp", - "url": "https://github.com/ropensci/onekp", - "rel": "/software/repository/github/ropensci/onekp", + "uid": "github/ropensci/skimr", + "url": "https://github.com/ropensci/skimr", + "rel": "/software/repository/github/ropensci/skimr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Access sequences from the 1000 Plant Initiative (1KP)", + "description": "A frictionless, pipeable approach to dealing with summary statistics", "topics": [ + "unconf17", "r", - "rstats", + "summary-statistics", + "ropensci", + "unconf", "r-package", - "data-access" + "rstats", + "peer-reviewed", + "scalereprod" ] }, { @@ -6133,189 +6020,204 @@ ] }, { - "uid": "github/ropensci/FedData", - "url": "https://github.com/ropensci/FedData", - "rel": "/software/repository/github/ropensci/FedData", + "uid": "github/ropensci/elastic", + "url": "https://github.com/ropensci/elastic", + "rel": "/software/repository/github/ropensci/elastic", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources", + "description": "R client for the Elasticsearch HTTP API", "topics": [ - "r", + "elasticsearch", + "http", + "database", + "database-wrapper", + "json", "rstats", + "r", "r-package", - "peer-reviewed", - "data-access" + "data-science", + "etl", + "API", + "documents", + "Elasticsearch", + "HTTP", + "Java", + "JSON", + "NoSQL", + "search", + "databases" ] }, { - "uid": "github/ropensci/taxizedb", - "url": "https://github.com/ropensci/taxizedb", - "rel": "/software/repository/github/ropensci/taxizedb", + "uid": "github/ropensci/rsnps", + "url": "https://github.com/ropensci/rsnps", + "rel": "/software/repository/github/ropensci/rsnps", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Tools for Working with Taxonomic SQL Databases", + "description": "Wrapper to a number of SNP web APIs", "topics": [ - "taxonomy", - "taxonomic-databases", - "itis", + "web-api", + "snps", + "data", "rstats", - "taxize", "r", - "r-package" + "r-package", + "API", + "api-client", + "dbSNP", + "gene", + "genotype", + "NCBI", + "OpenSNP", + "sequence", + "snp", + "species", + "web", + "data-access" ] }, { - "uid": "github/ropensci/hydroscoper", - "url": "https://github.com/ropensci/hydroscoper", - "rel": "/software/repository/github/ropensci/hydroscoper", + "uid": "github/ropensci/iheatmapr", + "url": "https://github.com/ropensci/iheatmapr", + "rel": "/software/repository/github/ropensci/iheatmapr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the Greek National Data Bank for Hydrometeorological Information", + "description": "Complex, interactive heatmaps in R", "topics": [ - "climate", - "hydroscope", - "hydrometeorology", - "hydrology", - "tidy-data", - "time-series", - "greece", - "water-resources", - "meteorological-stations", - "meteorological-data", + "heatmap", + "plotly", "r", + "interactive-visualizations", + "data-visualization", "rstats", "r-package", "peer-reviewed", - "data-access" + "htmlwidgets" ] }, { - "uid": "github/ropensci/rorcid", - "url": "https://github.com/ropensci/rorcid", - "rel": "/software/repository/github/ropensci/rorcid", + "uid": "github/ropensci/rb3", + "url": "https://github.com/ropensci/rb3", + "rel": "/software/repository/github/ropensci/rb3", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A programmatic interface the Orcid.org API", + "description": "A bunch of downloaders and parsers for data delivered from B3", "topics": [ - "api-wrapper", - "orcid", - "doi", - "scholarly-metadata", - "identifiers", - "rstats", "r", - "orcid-api", - "r-package", - "citations", - "literature", - "people", - "publications", - "scholarly", - "literature" + "market-data", + "finance", + "financial-data", + "financial-services", + "exchange-data", + "brazil" ] }, { - "uid": "github/ropensci/cde", - "url": "https://github.com/ropensci/cde", - "rel": "/software/repository/github/ropensci/cde", + "uid": "github/ropensci/rebird", + "url": "https://github.com/ropensci/rebird", + "rel": "/software/repository/github/ropensci/rebird", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Repo for R package to query and download WFD data from the EA Catchment Data Explorer site", + "description": "Wrapper to the eBird API", "topics": [ + "ebird", + "rstats", + "birds", + "ebird-api", + "r", + "ebird-webservices", + "spocc", + "r-package", + "biology", + "birding", + "data", + "database", + "observations", + "ornithology", + "sightings", "data-access" ] }, { - "uid": "github/ropensci/rzmq", - "url": "https://github.com/ropensci/rzmq", - "rel": "/software/repository/github/ropensci/rzmq", + "uid": "github/ropensci/lingtypology", + "url": "https://github.com/ropensci/lingtypology", + "rel": "/software/repository/github/ropensci/lingtypology", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for ZMQ", + "description": "R package for linguistic cartography and typological databases search", "topics": [ - "zmq", - "zeromq", + "clld", + "linguistics", + "typology", + "linguistic-maps", + "autotype", + "wals", + "phoible", + "glottolog-database", + "afbo", + "sails", + "abvd", + "atlas", "r", - "rstats", "r-package", - "scalereprod" - ] - }, - { - "uid": "github/ropensci/chirps", - "url": "https://github.com/ropensci/chirps", - "rel": "/software/repository/github/ropensci/chirps", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "API Client for CHIRPS", - "topics": [ - "climatology", - "precipitation-data", - "rstats", - "chirps" + "bivaltyp", + "literature" ] }, { - "uid": "github/ropensci/bowerbird", - "url": "https://github.com/ropensci/bowerbird", - "rel": "/software/repository/github/ropensci/bowerbird", + "uid": "github/ropensci/fauxpas", + "url": "https://github.com/ropensci/fauxpas", + "rel": "/software/repository/github/ropensci/fauxpas", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Keep a collection of sparkly data resources", + "description": "fauxpas does http errors", "topics": [ - "r", + "http", + "error-handling", "rstats", + "r", "r-package", - "peer-reviewed", - "Antarctic", - "climate", - "data", - "environmental", - "ropensci", - "satellite", - "SouthernOcean", - "scalereprod" + "API", + "curl", + "error", + "errors", + "https", + "web-services", + "http-tools" ] }, { - "uid": "github/ropensci/targets", - "url": "https://github.com/ropensci/targets", - "rel": "/software/repository/github/ropensci/targets", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "Function-oriented Make-like declarative workflows for R", + "uid": "github/ropensci/rrricanesdata", + "url": "https://github.com/ropensci/rrricanesdata", + "rel": "/software/repository/github/ropensci/rrricanesdata", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Supporting dataset for R package rrricanes", "topics": [ - "reproducibility", - "high-performance-computing", "r", - "data-science", - "pipeline", + "weather", "rstats", "r-package", - "workflow", - "targets", - "reproducible-research", - "make", - "r-targetopia", - "peer-reviewed" + "data-access" ] }, { - "uid": "github/ropensci/nasapower", - "url": "https://github.com/ropensci/nasapower", - "rel": "/software/repository/github/ropensci/nasapower", + "uid": "github/ropensci/rbhl", + "url": "https://github.com/ropensci/rbhl", + "rel": "/software/repository/github/ropensci/rbhl", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "API Client for NASA POWER Global Meteorology, Surface Solar Energy and Climatology in R", + "description": "R interface to the Biodiversity Heritage Library (BHL) API", "topics": [ - "agroclimatology", - "weather", + "web-api", + "biodiversity-heritage-library", + "data", + "metadata", + "api-wrapper", "r", - "nasa-power", - "nasa", - "agroclimatology-data", - "weather-variables", - "weather-data", - "earth-science", "rstats", - "data-access", "r-package", - "climate-data", - "global", - "meteorological-data", - "meteorology", - "NASA", - "NASA-POWER" + "API", + "BHL", + "conservation", + "library", + "OCR", + "species", + "taxonomy", + "text-mining", + "web-services", + "data-access" ] }, { @@ -6340,323 +6242,291 @@ ] }, { - "uid": "github/ropensci/nodbi", - "url": "https://github.com/ropensci/nodbi", - "rel": "/software/repository/github/ropensci/nodbi", + "uid": "github/ropensci/skynet", + "url": "https://github.com/ropensci/skynet", + "rel": "/software/repository/github/ropensci/skynet", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Document DBI connector for R", + "description": "Generates networks from BTS DB1B/T-100 data", "topics": [ - "rstats", - "database", - "nosql", - "couchdb", - "mongodb", - "elasticsearch", + "db1b", + "transtats", + "bureau-of-transport-statistics", + "bts", + "rita", + "t100", + "air-transport", + "skynet", + "peer-reviewed", "r", "r-package", - "sqlite", - "CouchDB", - "documents", - "Elasticsearch", - "JSON", - "MongoDB", - "NoSQL", - "PostgreSQL", - "SQLite", - "databases" + "rstats", + "data-access" ] }, { - "uid": "github/ropensci/randgeo", - "url": "https://github.com/ropensci/randgeo", - "rel": "/software/repository/github/ropensci/randgeo", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "random WKT or GeoJSON", + "uid": "github/ropensci/worrms", + "url": "https://github.com/ropensci/worrms", + "rel": "/software/repository/github/ropensci/worrms", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "World Register of Marine Species R client", "topics": [ - "geojson", - "wkt", + "taxonomy", + "marine-species", + "api-wrapper", + "biology", "rstats", "r", "r-package", - "geospatial" + "taxize", + "biological-data", + "fish", + "marine-biology", + "API", + "api-client", + "marine", + "science", + "species", + "web", + "worms" ] }, { - "uid": "github/ropensci/lingtypology", - "url": "https://github.com/ropensci/lingtypology", - "rel": "/software/repository/github/ropensci/lingtypology", + "uid": "github/ropensci/refsplitr", + "url": "https://github.com/ropensci/refsplitr", + "rel": "/software/repository/github/ropensci/refsplitr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for linguistic cartography and typological databases search", + "description": "R package for processing, organizing, and visualizing reference records downloaded from the Web of Science. ", "topics": [ - "clld", - "linguistics", - "typology", - "linguistic-maps", - "autotype", - "wals", - "phoible", - "glottolog-database", - "afbo", - "sails", - "abvd", - "atlas", - "r", - "r-package", - "bivaltyp", + "bibliometrics", + "coauthorship", + "collaboration", + "georeferencing", + "metascience", + "namedisambiguation", + "references", + "scienceofscience", + "scientometrics", + "WebofScience", "literature" ] }, { - "uid": "github/ropensci/tidyqpcr", - "url": "https://github.com/ropensci/tidyqpcr", - "rel": "/software/repository/github/ropensci/tidyqpcr", + "uid": "github/ropensci/nbaR", + "url": "https://github.com/ropensci/nbaR", + "rel": "/software/repository/github/ropensci/nbaR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "quantitative PCR analysis in the tidyverse", + "description": "R client library for the Netherlands Biodiversity Api (NBA)", "topics": [ - "qpcr-analysis", - "tidyverse", "r", - "rstats", - "r-package", - "miqe", - "qpcr" + "biodiversity-data", + "api-client", + "data-access" ] }, { - "uid": "github/ropensci/oai", - "url": "https://github.com/ropensci/oai", - "rel": "/software/repository/github/ropensci/oai", + "uid": "github/ropensci/geojsonio", + "url": "https://github.com/ropensci/geojsonio", + "rel": "/software/repository/github/ropensci/geojsonio", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "OAI-PMH R client", + "description": "Convert many data formats to & from GeoJSON & TopoJSON", "topics": [ - "oai-pmh", + "geojson", + "topojson", + "io", "rstats", - "data-access", - "scholarly-api", "r", "r-package", - "peer-reviewed", - "literature" + "conversion", + "data", + "geospatial", + "input-output", + "geospatial" ] }, { - "uid": "github/ropensci/rrricanesdata", - "url": "https://github.com/ropensci/rrricanesdata", - "rel": "/software/repository/github/ropensci/rrricanesdata", + "uid": "github/ropensci/chlorpromazineR", + "url": "https://github.com/ropensci/chlorpromazineR", + "rel": "/software/repository/github/ropensci/chlorpromazineR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Supporting dataset for R package rrricanes", + "description": "Calculate chlorpromazine-equivalent doses in R", "topics": [ + "psychiatry", + "pharmacology", "r", - "weather", - "rstats", - "r-package", - "data-access" + "antipsychotic", + "schizophrenia", + "scalereprod" ] }, { - "uid": "github/ropensci/codemetar", - "url": "https://github.com/ropensci/codemetar", - "rel": "/software/repository/github/ropensci/codemetar", + "uid": "github/ropensci/bibtex", + "url": "https://github.com/ropensci/bibtex", + "rel": "/software/repository/github/ropensci/bibtex", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "an R package for generating and working with codemeta", + "description": "bibtex parser for R", "topics": [ - "metadata", - "json-ld", - "codemeta", + "bibtex", + "parser", "r", - "rstats", - "r-package", - "peer-reviewed", - "citation", - "credit", - "linked-data", - "ropensci", - "data-publication" + "literature" ] }, { - "uid": "github/ropensci/geojsonlint", - "url": "https://github.com/ropensci/geojsonlint", - "rel": "/software/repository/github/ropensci/geojsonlint", + "uid": "github/ropensci/crul", + "url": "https://github.com/ropensci/crul", + "rel": "/software/repository/github/ropensci/crul", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "GeoJSON linting for R (THIS IS NOT THE SRC FOR geojsonlint.com)", + "description": "R6 based http client for R (made for developers)", "topics": [ - "geojson", - "linter", - "r", + "http", + "curl", + "async", "rstats", - "r-package", - "data", - "geospatial", - "hint", - "lint", - "schema", - "geospatial" - ] - }, - { - "uid": "github/ropensci/taxize", - "url": "https://github.com/ropensci/taxize", - "rel": "/software/repository/github/ropensci/taxize", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A taxonomic toolbelt for R", - "topics": [ - "taxonomy", - "data", "api", - "biodiversity", - "biology", - "rstats", - "nomenclature", - "darwincore", - "taxize", - "api-wrapper", "r", "r-package", "API", - "api-client", - "identifiers", - "JSON", - "names", - "species", - "web" + "caching", + "download", + "https", + "libcurl", + "mocking", + "web-services", + "http-tools" ] }, { - "uid": "github/ropensci/mregions", - "url": "https://github.com/ropensci/mregions", - "rel": "/software/repository/github/ropensci/mregions", + "uid": "github/ropensci/cRegulome", + "url": "https://github.com/ropensci/cRegulome", + "rel": "/software/repository/github/ropensci/cRegulome", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "MarineRegions R client", + "description": "An R package to access, manage and visualize regulome (microRNA/transcription factors)-gene correlations in cancer", "topics": [ - "rstats", "r", - "marine", - "spatial", - "r-package", - "peer-reviewed", - "geospatial" - ] - }, - { - "uid": "github/ropensci/opencage", - "url": "https://github.com/ropensci/opencage", - "rel": "/software/repository/github/ropensci/opencage", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":globe_with_meridians: R package for the OpenCage API -- both forward and reverse geocoding :globe_with_meridians:", - "topics": [ + "database", + "datascience", + "cancer-genomics", + "tcga-data", + "transcription-factors", + "microrna", "rstats", - "rspatial", - "geocode", - "opencage-geocoder", - "r", - "opencage-api", - "opencage", - "geocoder", - "placenames", "r-package", "peer-reviewed", - "geospatial" + "data-access" ] }, { - "uid": "github/ropensci/slopes", - "url": "https://github.com/ropensci/slopes", - "rel": "/software/repository/github/ropensci/slopes", + "uid": "github/ropensci/rnassqs", + "url": "https://github.com/ropensci/rnassqs", + "rel": "/software/repository/github/ropensci/rnassqs", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Package to calculate slopes of roads, rivers and trajectories", + "description": "R interface for the USDA National Agricultural Statistical Service's (NASS) 'Quick Stats' API (https://quickstats.nass.usda.gov/api)", "topics": [ - "geospatial" + "data-access" ] }, { - "uid": "github/ropensci/coder", - "url": "https://github.com/ropensci/coder", - "rel": "/software/repository/github/ropensci/coder", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "Classification of Cases into Deterministic Categories", + "uid": "github/ropensci/wellknown", + "url": "https://github.com/ropensci/wellknown", + "rel": "/software/repository/github/ropensci/wellknown", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "WKT <-> GeoJSON", "topics": [ + "geojson", + "wkt", + "wkb", + "rstats", + "wellknown", + "geospatial", + "spatial", "r", - "package", "r-package", - "classification", - "icd-10", - "rstats" + "binary", + "conversion", + "well-known-text" ] }, { - "uid": "github/ropensci/addressable", - "url": "https://github.com/ropensci/addressable", - "rel": "/software/repository/github/ropensci/addressable", + "uid": "github/ropensci/isdparser", + "url": "https://github.com/ropensci/isdparser", + "rel": "/software/repository/github/ropensci/isdparser", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Email Address Validation", + "description": "NOAA ISD/ISH file parser", "topics": [ - "geospatial" + "noaa", + "climate", + "rstats", + "isd", + "noaa-isd", + "r", + "r-package", + "data", + "ISD", + "NOAA", + "stations", + "data-access" ] }, { - "uid": "github/ropensci/rb3", - "url": "https://github.com/ropensci/rb3", - "rel": "/software/repository/github/ropensci/rb3", + "uid": "github/ropensci/tif", + "url": "https://github.com/ropensci/tif", + "rel": "/software/repository/github/ropensci/tif", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A bunch of downloaders and parsers for data delivered from B3", + "description": "Text Interchange Formats", "topics": [ + "text-processing", + "corpus", + "term-frequency", + "tokenizer", + "natural-language-processing", + "r-package", "r", - "market-data", - "finance", - "financial-data", - "financial-services", - "exchange-data", - "brazil" + "rstats", + "literature" ] }, { - "uid": "github/ropensci/hoardr", - "url": "https://github.com/ropensci/hoardr", - "rel": "/software/repository/github/ropensci/hoardr", + "uid": "github/ropensci/xslt", + "url": "https://github.com/ropensci/xslt", + "rel": "/software/repository/github/ropensci/xslt", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "manage cached files", + "description": "Extension of xml2 package for xsl transformations", "topics": [ - "caching", + "xslt", + "xml", "r", "rstats", "r-package", - "data", - "files", - "pdf", - "xml", - "scalereprod" + "data-extraction" ] }, { - "uid": "github/ropensci/camsRad", - "url": "https://github.com/ropensci/camsRad", - "rel": "/software/repository/github/ropensci/camsRad", + "uid": "github/ropensci/tacmagic", + "url": "https://github.com/ropensci/tacmagic", + "rel": "/software/repository/github/ropensci/tacmagic", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Client for CAMS Radiation Service", + "description": "tacmagic: PET Analysis in R", "topics": [ + "positron-emission-tomography", + "pet", + "pet-mr", + "neuroimaging", "r", - "r-package", - "rstats", - "peer-reviewed", - "data-access" + "statistics", + "positron", + "mri", + "neuroscience", + "neuroscience-methods", + "data-extraction" ] }, { - "uid": "github/ropensci/rperseus", - "url": "https://github.com/ropensci/rperseus", - "rel": "/software/repository/github/ropensci/rperseus", + "uid": "github/ropensci/gtfsr", + "url": "https://github.com/ropensci/gtfsr", + "rel": "/software/repository/github/ropensci/gtfsr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Get texts from the Perseus Digital Library :hocho: :snake: :snake: :snake:", + "description": "Package for obtaining, validating, viewing, and storing GTFS (transit) data", "topics": [ - "greek-bible", - "greek-new-testament", - "latin", - "classics", - "greek", - "perseus", - "perseus-digital-library", - "translation", "r", "rstats", "r-package", @@ -6665,171 +6535,212 @@ ] }, { - "uid": "github/ropensci/ots", - "url": "https://github.com/ropensci/ots", - "rel": "/software/repository/github/ropensci/ots", + "uid": "github/ropensci/NLMR", + "url": "https://github.com/ropensci/NLMR", + "rel": "/software/repository/github/ropensci/NLMR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "ocean time series datasets", + "description": "\ud83d\udce6 R package to simulate neutral landscape models \ud83c\udfd4", "topics": [ - "ocean", - "data", - "scientific-data-types", - "time-series", "r", + "spatial", + "landscape-ecology", + "neutral-landscape-model", "rstats", "r-package", - "data-access" + "peer-reviewed", + "geospatial" ] }, { - "uid": "github/ropensci/gigs", - "url": "https://github.com/ropensci/gigs", - "rel": "/software/repository/github/ropensci/gigs", + "uid": "github/ropensci/rdflib", + "url": "https://github.com/ropensci/rdflib", + "rel": "/software/repository/github/ropensci/rdflib", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Convert between measurements and z-scores/percentiles for INTERGROWTH-21st and WHO Child Growth Standards, and classify growth patterns.", + "description": ":package: High level wrapper around the redland package for common rdf applications ", "topics": [ - "growth-standards", - "anthropometry", - "intergrowth", "r", - "who", + "rstats", "r-package", - "rstats" + "peer-reviewed", + "data-extraction" ] }, { - "uid": "github/ropensci/handlr", - "url": "https://github.com/ropensci/handlr", - "rel": "/software/repository/github/ropensci/handlr", + "uid": "github/ropensci/taxizedb", + "url": "https://github.com/ropensci/taxizedb", + "rel": "/software/repository/github/ropensci/taxizedb", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "convert among citation formats", + "description": "Tools for Working with Taxonomic SQL Databases", "topics": [ - "citations", - "doi", - "digital-object-identifier", - "metadata", - "bibtex", - "citeproc", - "crosscite", - "ris", - "r", - "r-package", + "taxonomy", + "taxonomic-databases", + "itis", "rstats", - "citation", - "Citeproc", - "Codemeta", - "Crosscite", - "Crossref", - "JSON", - "RDF", - "RIS", - "XML", - "literature" + "taxize", + "r", + "r-package" ] }, { - "uid": "github/ropensci/taxa", - "url": "https://github.com/ropensci/taxa", - "rel": "/software/repository/github/ropensci/taxa", + "uid": "github/ropensci/rgbif", + "url": "https://github.com/ropensci/rgbif", + "rel": "/software/repository/github/ropensci/rgbif", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "taxonomic classes for R", + "description": "Interface to the Global Biodiversity Information Facility API", "topics": [ - "taxonomy", - "taxon", - "data-cleaning", + "gbif", + "api", + "data", + "biodiversity", + "species", "rstats", "r", + "spocc", "r-package", - "biology", - "hierarchy" + "lifewatch", + "oscibio", + "API", + "GBIF", + "occurrences", + "specimens", + "taxonomy", + "web-services", + "data-access" ] }, { - "uid": "github/ropensci/Rpolyhedra", - "url": "https://github.com/ropensci/Rpolyhedra", - "rel": "/software/repository/github/ropensci/Rpolyhedra", + "uid": "github/ropensci/phonfieldwork", + "url": "https://github.com/ropensci/phonfieldwork", + "rel": "/software/repository/github/ropensci/phonfieldwork", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A polyhedra database scraped from public available sources using R6 (OOP) and 'rgl' visualizing capabilities. ", + "description": "R package for phonetic research and experimenting", "topics": [ - "polyhedra-database", - "geometry", - "rgl", + "r", + "phonetics", + "phonology", + "fieldwork", + "praat", + "textgrid", + "elan", + "eaf", + "exmaralda", + "exb", + "flextext", + "audacity", + "srt-subtitles", "data-extraction" ] }, { - "uid": "github/ropensci/pendulum", - "url": "https://github.com/ropensci/pendulum", - "rel": "/software/repository/github/ropensci/pendulum", + "uid": "github/ropensci/outsider", + "url": "https://github.com/ropensci/outsider", + "rel": "/software/repository/github/ropensci/outsider", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "a date/time replacement pkg for R to facilitate time hacking", + "description": ":black_square_button::registered: Install and run programs, outside of R, inside of R", "topics": [ - "r", + "docker", "rstats", - "time-mock", - "mock-time", + "reproducibility", "scalereprod" ] }, { - "uid": "github/ropensci/fauxpas", - "url": "https://github.com/ropensci/fauxpas", - "rel": "/software/repository/github/ropensci/fauxpas", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "fauxpas does http errors", + "uid": "github/ropensci/medrxivr", + "url": "https://github.com/ropensci/medrxivr", + "rel": "/software/repository/github/ropensci/medrxivr", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "Access and search medRxiv and bioRxiv preprint data", "topics": [ - "http", - "error-handling", + "evidence-synthesis", + "systematic-reviews", + "bibliographic-database", "rstats", - "r", "r-package", - "API", - "curl", - "error", - "errors", - "https", - "web-services", - "http-tools" + "r", + "preprint-records", + "medrxiv-data", + "biorxiv", + "peer-reviewed" ] }, { - "uid": "github/ropensci/PostcodesioR", - "url": "https://github.com/ropensci/PostcodesioR", - "rel": "/software/repository/github/ropensci/PostcodesioR", + "uid": "github/ropensci/FedData", + "url": "https://github.com/ropensci/FedData", + "rel": "/software/repository/github/ropensci/FedData", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "API wrapper around postcodes.io - free UK postcode lookup and geocoder", + "description": "Functions to Automate Downloading Geospatial Data Available from Several Federated Data Sources", "topics": [ "r", - "api-wrapper", - "geocoder", - "postcode", - "uk", - "geographic-data", "rstats", "r-package", "peer-reviewed", - "geospatial" + "data-access" ] }, { - "uid": "github/ropensci/workloopR", - "url": "https://github.com/ropensci/workloopR", - "rel": "/software/repository/github/ropensci/workloopR", + "uid": "github/ropensci/colocr", + "url": "https://github.com/ropensci/colocr", + "rel": "/software/repository/github/ropensci/colocr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "\ud83d\udcaa Analysis of work loops and other data from muscle physiology experiments", + "description": "An R package for conducting co-localization analysis. Edit", "topics": [ - "muscle-physiology-experiments", - "work-loop", - "muscle-force", - "tetanus", - "workloop", - "ddf", + "image-analysis", + "colocalization", "r", "r-package", "rstats", "data-extraction" ] }, + { + "uid": "github/ropensci/git2r", + "url": "https://github.com/ropensci/git2r", + "rel": "/software/repository/github/ropensci/git2r", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "R bindings to the libgit2 library", + "topics": [ + "libgit2", + "libgit2-library", + "git", + "git-client", + "r", + "rstats", + "r-package", + "scalereprod" + ] + }, + { + "uid": "github/ropensci/rfisheries", + "url": "https://github.com/ropensci/rfisheries", + "rel": "/software/repository/github/ropensci/rfisheries", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "package for interacting with fisheries databases at openfisheries.org", + "topics": [ + "fisheries", + "open-data", + "openfisheries", + "r", + "rstats", + "r-package", + "data-access" + ] + }, + { + "uid": "github/ropensci/unrtf", + "url": "https://github.com/ropensci/unrtf", + "rel": "/software/repository/github/ropensci/unrtf", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Wrapper for 'unrtf' utility to extract text from RTF documents", + "topics": [ + "rtf", + "extract-text", + "unrtf", + "r", + "rstats", + "r-package", + "literature" + ] + }, { "uid": "github/ropensci/clifro", "url": "https://github.com/ropensci/clifro", @@ -6859,581 +6770,542 @@ ] }, { - "uid": "github/ropensci/rotl", - "url": "https://github.com/ropensci/rotl", - "rel": "/software/repository/github/ropensci/rotl", + "uid": "github/ropensci/photosearcher", + "url": "https://github.com/ropensci/photosearcher", + "rel": "/software/repository/github/ropensci/photosearcher", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Interface to Open Tree of Life API", + "description": "Searches Flickr for photographs and metadata ", "topics": [ - "r", - "rstats", - "r-package", - "taxonomy", - "phylogeny", - "peer-reviewed", - "biodiversity", - "independant-contrasts", - "metadata", - "phylogenetics", - "ropensci", "data-access" ] }, { - "uid": "github/ropensci/finch", - "url": "https://github.com/ropensci/finch", - "rel": "/software/repository/github/ropensci/finch", + "uid": "github/ropensci/tidypmc", + "url": "https://github.com/ropensci/tidypmc", + "rel": "/software/repository/github/ropensci/tidypmc", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Read Darwin Core Archive files", + "description": "Parse full text XML documents from Pubmed Central", "topics": [ - "rstats", - "darwin-core", - "darwincore", - "biodiversity", - "gbif", - "r", - "r-package", - "biology", - "collections", - "occurrences", - "species", - "specimen", - "data-extraction" + "literature" ] }, { - "uid": "github/ropensci/rdflib", - "url": "https://github.com/ropensci/rdflib", - "rel": "/software/repository/github/ropensci/rdflib", + "uid": "github/ropensci/rAvis", + "url": "https://github.com/ropensci/rAvis", + "rel": "/software/repository/github/ropensci/rAvis", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: High level wrapper around the redland package for common rdf applications ", + "description": "rAvis: an R-package to download the information stored in \u201cproyectoavis\u201d, a citizen science bird project. ", "topics": [ "r", "rstats", + "avis", + "citizen-science", + "bird", + "birds", + "proyectoavis", "r-package", - "peer-reviewed", - "data-extraction" + "data-access" ] }, { - "uid": "github/ropensci/parzer", - "url": "https://github.com/ropensci/parzer", - "rel": "/software/repository/github/ropensci/parzer", + "uid": "github/ropensci/exoplanets", + "url": "https://github.com/ropensci/exoplanets", + "rel": "/software/repository/github/ropensci/exoplanets", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Parse geographic coordinates", + "description": ":earth_americas: Provides access to NASA's Exoplanet Archive", "topics": [ - "r", "rstats", - "geo", - "geospatial", - "parser", - "coordinates", - "data", - "latitude", - "longitude" + "nasa", + "exoplanets", + "api", + "data-access" ] }, { - "uid": "github/ropensci/rbace", - "url": "https://github.com/ropensci/rbace", - "rel": "/software/repository/github/ropensci/rbace", + "uid": "github/ropensci/excluder", + "url": "https://github.com/ropensci/excluder", + "rel": "/software/repository/github/ropensci/excluder", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "BASE R client", + "description": "Checks for Exclusion Criteria in Online Data", "topics": [ - "api-wrapper", - "scholarly-metadata", - "rstats", + "qualtrics", + "mturk", + "datacleaning", + "exclusion", "r", + "rstats", "r-package", - "citations", - "literature", - "scholarly", - "search", - "text-ming", - "data-access" + "data-extraction" ] }, { - "uid": "github/ropensci/infx", - "url": "https://github.com/ropensci/infx", - "rel": "/software/repository/github/ropensci/infx", + "uid": "github/ropensci/ecoengine", + "url": "https://github.com/ropensci/ecoengine", + "rel": "/software/repository/github/ropensci/ecoengine", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Access to InfectX/TargetInfectX screening data from R", + "description": "Programmatic interface to the Berkeley Ecoinformatics Engine ", "topics": [ "r", - "r-package", - "api-client", - "openbis", - "peer-reviewed", "rstats", + "ecoengine", + "berkeley-ecoinformatics-engine", + "spocc", + "r-package", "data-access" ] }, { - "uid": "github/ropensci/fireexposuR", - "url": "https://github.com/ropensci/fireexposuR", - "rel": "/software/repository/github/ropensci/fireexposuR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Compute and Visualize Wildfire Exposure", - "topics": [] - }, - { - "uid": "github/ropensci/Rclean", - "url": "https://github.com/ropensci/Rclean", - "rel": "/software/repository/github/ropensci/Rclean", + "uid": "github/ropensci/rgnparser", + "url": "https://github.com/ropensci/rgnparser", + "rel": "/software/repository/github/ropensci/rgnparser", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Isolate essential code to re-produce specific results.", + "description": "Parse scientific names using gnparser (https://github.com/gnames/gnparser)", "topics": [ - "scalereprod" + "r", + "rstats", + "taxonomy", + "r-package" ] }, { - "uid": "github/ropensci/tabulizer", - "url": "https://github.com/ropensci/tabulizer", - "rel": "/software/repository/github/ropensci/tabulizer", + "uid": "github/ropensci/ots", + "url": "https://github.com/ropensci/ots", + "rel": "/software/repository/github/ropensci/ots", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Bindings for Tabula PDF Table Extractor Library", + "description": "ocean time series datasets", "topics": [ - "tabula", - "tabular-data", - "pdf", - "java", - "pdf-document", + "ocean", + "data", + "scientific-data-types", + "time-series", "r", - "r-package", - "ropensci", "rstats", - "peer-reviewed", - "literature" + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/BaseSet", - "url": "https://github.com/ropensci/BaseSet", - "rel": "/software/repository/github/ropensci/BaseSet", + "uid": "github/ropensci/rdatacite", + "url": "https://github.com/ropensci/rdatacite", + "rel": "/software/repository/github/ropensci/rdatacite", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Provides classes for working with sets", + "description": "Wrapper to DataCite metadata", "topics": [ + "datacite", + "oai-pmh", + "metadata", + "api-wrapper", + "rstats", "r", - "sets", - "package", + "solr", + "identifier", "r-package", - "bioconductor-package", - "bioconductor", - "scalereprod" + "API", + "data", + "dataset", + "https", + "scholarly", + "web-services", + "literature" ] }, { - "uid": "github/ropensci/spelling", - "url": "https://github.com/ropensci/spelling", - "rel": "/software/repository/github/ropensci/spelling", + "uid": "github/ropensci/restez", + "url": "https://github.com/ropensci/restez", + "rel": "/software/repository/github/ropensci/restez", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Tools for Spell Checking in R", + "description": ":sleeping: :open_file_folder: Create and Query a Local Copy of GenBank in R", "topics": [ - "spell-check", - "spell-checker", + "genbank", + "dna", + "sequence", + "entrez", "r", - "rstats", - "spelling", - "spellcheck", - "spellchecker", "r-package", + "rstats", "data-extraction" ] }, { - "uid": "github/ropensci/vcr", - "url": "https://github.com/ropensci/vcr", - "rel": "/software/repository/github/ropensci/vcr", + "uid": "github/ropensci/namext", + "url": "https://github.com/ropensci/namext", + "rel": "/software/repository/github/ropensci/namext", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Record HTTP calls and replay them", + "description": "extract scientific names from papers/articles/text using gnfinder (https://github.com/gnames/gnfinder)", "topics": [ - "unit-testing", - "testing", - "mocking", - "rstats", - "vcr", "r", - "r-package", - "API", - "curl", - "http", - "http-mocking", - "https", - "mock", - "tdd", - "testing-tools", - "web-services", - "http-tools" + "rstats", + "taxonomy" ] }, { - "uid": "github/ropensci/roadoi", - "url": "https://github.com/ropensci/roadoi", - "rel": "/software/repository/github/ropensci/roadoi", + "uid": "github/ropensci/patentsview", + "url": "https://github.com/ropensci/patentsview", + "rel": "/software/repository/github/ropensci/patentsview", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Use Unpaywall with R", + "description": "An R client to the PatentsView API", "topics": [ - "open-access", - "oadoi", + "patents", + "uspto", + "patentsview-api", "r", - "webclient", - "code4lib", - "altmetrics", "rstats", + "patentsview", "r-package", "peer-reviewed", - "unpaywall", "literature" ] }, { - "uid": "github/ropensci/baRcodeR", - "url": "https://github.com/ropensci/baRcodeR", - "rel": "/software/repository/github/ropensci/baRcodeR", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Labeling, tracking, and organizing samples with 2D barcodes", - "topics": [ - "scalereprod" - ] - }, - { - "uid": "github/ropensci/USAboundariesData", - "url": "https://github.com/ropensci/USAboundariesData", - "rel": "/software/repository/github/ropensci/USAboundariesData", + "uid": "github/ropensci/scrubr", + "url": "https://github.com/ropensci/scrubr", + "rel": "/software/repository/github/ropensci/scrubr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Datasets for the 'USAboundaries' package", + "description": "Clean species occurrence records", "topics": [ - "r", + "biodiversity", + "data-cleaning", + "gbif", "rstats", + "r", + "spocc", "r-package", - "data-access" + "data", + "occurrences", + "specimens", + "data-extraction" ] }, { - "uid": "github/ropensci/ezknitr", - "url": "https://github.com/ropensci/ezknitr", - "rel": "/software/repository/github/ropensci/ezknitr", + "uid": "github/ropensci/hddtools", + "url": "https://github.com/ropensci/hddtools", + "rel": "/software/repository/github/ropensci/hddtools", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Avoid the typical working directory pain when using 'knitr'", + "description": "Hydrological Data Discovery Tools (R package for hydrology and open data)", "topics": [ - "rmarkdown", - "knitr", - "rmd", - "reproducibility", "r", "rstats", "r-package", + "hydrology", + "sepa", + "precipitation", + "mopex", + "data60uk", + "grdc", + "kgclimateclass", "peer-reviewed", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/iheatmapr", - "url": "https://github.com/ropensci/iheatmapr", - "rel": "/software/repository/github/ropensci/iheatmapr", + "uid": "github/ropensci/cffr", + "url": "https://github.com/ropensci/cffr", + "rel": "/software/repository/github/ropensci/cffr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Complex, interactive heatmaps in R", + "description": "Generate Citation File Format (cff) Metadata for R Packages", "topics": [ - "heatmap", - "plotly", "r", - "interactive-visualizations", - "data-visualization", - "rstats", "r-package", - "peer-reviewed", - "htmlwidgets" + "attribution", + "citation-files", + "citation", + "citation-file-format" ] }, { - "uid": "github/ropensci/terrainr", - "url": "https://github.com/ropensci/terrainr", - "rel": "/software/repository/github/ropensci/terrainr", + "uid": "github/ropensci/citecorp", + "url": "https://github.com/ropensci/citecorp", + "rel": "/software/repository/github/ropensci/citecorp", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Get DEMs and orthoimagery from the USGS National Map, georeference your images and merge rasters, and visualize with Unity 3D", + "description": "Client for the Open Citations Corpus", "topics": [ + "opencitations", + "citations", + "doi", + "pmid", + "pmcid", + "sparql", "r", "r-package", - "cran", - "terrainr", "rstats", - "usgs", - "map", - "mapping", - "national-map", - "unity-rendering-engine", - "unity", - "map-tiles", - "progressr", - "peer-reviewed", - "retrieve-data", - "orthoimagery", - "dems", - "datasets", - "nhd" + "bibtex", + "citation", + "metadata", + "literature" ] }, { - "uid": "github/ropensci/osmplotr", - "url": "https://github.com/ropensci/osmplotr", - "rel": "/software/repository/github/ropensci/osmplotr", + "uid": "github/ropensci/rotl", + "url": "https://github.com/ropensci/rotl", + "rel": "/software/repository/github/ropensci/rotl", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Data visualisation using OpenStreetMap objects", + "description": "Interface to Open Tree of Life API", "topics": [ - "osm", - "openstreetmap", - "overpass-api", - "overpass", - "data-visualisation", - "highlighting-clusters", "r", "rstats", "r-package", + "taxonomy", + "phylogeny", "peer-reviewed", - "geospatial" + "biodiversity", + "independant-contrasts", + "metadata", + "phylogenetics", + "ropensci", + "data-access" ] }, { - "uid": "github/ropensci/wateRinfo", - "url": "https://github.com/ropensci/wateRinfo", - "rel": "/software/repository/github/ropensci/wateRinfo", + "uid": "github/ropensci/c14bazAAR", + "url": "https://github.com/ropensci/c14bazAAR", + "rel": "/software/repository/github/ropensci/c14bazAAR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to download time series data from waterinfo.be", + "description": "R Package - Download and Prepare C14 Dates from Different Source Databases", "topics": [ + "radiocarbon-dates", + "archaeology", "r", - "package", - "api", - "ropensci", - "open-science", - "water", - "weather", - "climate", - "r-package", - "rstats", - "lifewatch", - "oscibio", "data-access" ] }, { - "uid": "github/ropensci/cRegulome", - "url": "https://github.com/ropensci/cRegulome", - "rel": "/software/repository/github/ropensci/cRegulome", + "uid": "github/ropensci/antiword", + "url": "https://github.com/ropensci/antiword", + "rel": "/software/repository/github/ropensci/antiword", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package to access, manage and visualize regulome (microRNA/transcription factors)-gene correlations in cancer", + "description": "R wrapper for antiword utility", "topics": [ + "antiword", + "extract-text", "r", - "database", - "datascience", - "cancer-genomics", - "tcga-data", - "transcription-factors", - "microrna", "rstats", "r-package", - "peer-reviewed", - "data-access" + "literature" ] }, { - "uid": "github/ropensci/awardFindR", - "url": "https://github.com/ropensci/awardFindR", - "rel": "/software/repository/github/ropensci/awardFindR", + "uid": "github/ropensci/fulltext", + "url": "https://github.com/ropensci/fulltext", + "rel": "/software/repository/github/ropensci/fulltext", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Scan multiple online grant databases for relevant awards", + "description": "Search across and get full text for OA & closed journals", "topics": [ - "data-access" - ] + "text-ming", + "pdf", + "metadata", + "open-access", + "xml", + "extract-text", + "crossref", + "rstats", + "r", + "r-package", + "citations", + "full-text", + "literature", + "publications", + "TDM", + "text-mining", + "literature" + ] }, { - "uid": "github/ropensci/phylotaR", - "url": "https://github.com/ropensci/phylotaR", - "rel": "/software/repository/github/ropensci/phylotaR", + "uid": "github/ropensci/predictNMB", + "url": "https://github.com/ropensci/predictNMB", + "rel": "/software/repository/github/ropensci/predictNMB", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An automated pipeline for retrieving orthologous DNA sequences from GenBank in R", + "description": null, + "topics": [] + }, + { + "uid": "github/ropensci/conditionz", + "url": "https://github.com/ropensci/conditionz", + "rel": "/software/repository/github/ropensci/conditionz", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "control how many times conditions are thrown", "topics": [ - "sequence-alignment", - "blastn", - "phylogenetics", "r", - "genbank", - "peer-reviewed", - "r-package", "rstats", - "data-access" + "conditions", + "r-package", + "condition", + "condition-control", + "message", + "warning", + "scalereprod" ] }, { - "uid": "github/ropensci/git2r", - "url": "https://github.com/ropensci/git2r", - "rel": "/software/repository/github/ropensci/git2r", + "uid": "github/ropensci/tesseract", + "url": "https://github.com/ropensci/tesseract", + "rel": "/software/repository/github/ropensci/tesseract", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R bindings to the libgit2 library", + "description": "Bindings to Tesseract OCR engine for R", "topics": [ - "libgit2", - "libgit2-library", - "git", - "git-client", + "tesseract", + "ocr", "r", "rstats", "r-package", - "scalereprod" + "tesseract-ocr", + "image-processing" ] }, { - "uid": "github/ropensci/citecorp", - "url": "https://github.com/ropensci/citecorp", - "rel": "/software/repository/github/ropensci/citecorp", + "uid": "github/ropensci/qpdf", + "url": "https://github.com/ropensci/qpdf", + "rel": "/software/repository/github/ropensci/qpdf", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Client for the Open Citations Corpus", + "description": "Split, Combine and Compress PDF files", "topics": [ - "opencitations", - "citations", - "doi", - "pmid", - "pmcid", - "sparql", "r", "r-package", "rstats", - "bibtex", - "citation", - "metadata", "literature" ] }, { - "uid": "github/ropensci/scrubr", - "url": "https://github.com/ropensci/scrubr", - "rel": "/software/repository/github/ropensci/scrubr", + "uid": "github/ropensci/charlatan", + "url": "https://github.com/ropensci/charlatan", + "rel": "/software/repository/github/ropensci/charlatan", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Clean species occurrence records", + "description": "Create fake data in R", "topics": [ - "biodiversity", - "data-cleaning", - "gbif", + "data", + "faker", "rstats", + "dataset", + "fake-data", "r", - "spocc", "r-package", - "data", - "occurrences", - "specimens", - "data-extraction" + "peer-reviewed", + "scalereprod" ] }, { - "uid": "github/ropensci/gpg", - "url": "https://github.com/ropensci/gpg", - "rel": "/software/repository/github/ropensci/gpg", + "uid": "github/ropensci/weathercan", + "url": "https://github.com/ropensci/weathercan", + "rel": "/software/repository/github/ropensci/weathercan", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Bindings to gpgme for R", + "description": "R package for downloading weather data from Environment and Climate Change Canada", "topics": [ - "gpgme" + "weather-data", + "environment-canada", + "weather-downloader", + "r", + "rstats", + "r-package", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/git2rdata", - "url": "https://github.com/ropensci/git2rdata", - "rel": "/software/repository/github/ropensci/git2rdata", + "uid": "github/ropensci/EML", + "url": "https://github.com/ropensci/EML", + "rel": "/software/repository/github/ropensci/EML", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R package for storing and retrieving data.frames in git repositories.", + "description": " Ecological Metadata Language interface for R: synthesis and integration of heterogenous data", "topics": [ + "metadata-standard", + "eml", + "eml-metadata", "r", "rstats", "r-package", - "version-control", - "reproducible-research", - "data-extraction" + "data-publication" ] }, { - "uid": "github/ropensci/writexl", - "url": "https://github.com/ropensci/writexl", - "rel": "/software/repository/github/ropensci/writexl", + "uid": "github/ropensci/finch", + "url": "https://github.com/ropensci/finch", + "rel": "/software/repository/github/ropensci/finch", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Portable, light-weight data frame to xlsx exporter for R", + "description": "Read Darwin Core Archive files", "topics": [ - "libxlsxwriter", - "r", - "xlsx", - "excel", "rstats", + "darwin-core", + "darwincore", + "biodiversity", + "gbif", + "r", "r-package", + "biology", + "collections", + "occurrences", + "species", + "specimen", "data-extraction" ] }, { - "uid": "github/ropensci/aRxiv", - "url": "https://github.com/ropensci/aRxiv", - "rel": "/software/repository/github/ropensci/aRxiv", + "uid": "github/ropensci/jsonvalidate", + "url": "https://github.com/ropensci/jsonvalidate", + "rel": "/software/repository/github/ropensci/jsonvalidate", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Programmatic interface to the Arxiv API", + "description": ":heavy_check_mark::interrobang: Validate JSON", "topics": [ - "arxiv-api", - "arxiv", - "arxiv-org", - "arxiv-analytics", "r", "rstats", + "jsonvalidate", + "json", + "json-validation", "r-package", - "literature" + "scalereprod" ] }, { - "uid": "github/ropensci/RNeXML", - "url": "https://github.com/ropensci/RNeXML", - "rel": "/software/repository/github/ropensci/RNeXML", + "uid": "github/ropensci/ssh", + "url": "https://github.com/ropensci/ssh", + "rel": "/software/repository/github/ropensci/ssh", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Implementing semantically rich NeXML I/O in R", + "description": "Native SSH client in R based on libssh", "topics": [ + "libssh", + "ssh", + "ssh-client", "r", "rstats", - "nexml", - "phylogenetics", "r-package", - "linked-data", - "metadata", - "data-publication" + "security" ] }, { - "uid": "github/ropensci/geojsonio", - "url": "https://github.com/ropensci/geojsonio", - "rel": "/software/repository/github/ropensci/geojsonio", + "uid": "github/ropensci/RSelenium", + "url": "https://github.com/ropensci/RSelenium", + "rel": "/software/repository/github/ropensci/RSelenium", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Convert many data formats to & from GeoJSON & TopoJSON", + "description": "An R client for Selenium Remote WebDriver", "topics": [ - "geojson", - "topojson", - "io", - "rstats", + "rselenium", + "webdriver", + "selenium", "r", + "rstats", "r-package", - "conversion", - "data", - "geospatial", - "input-output", - "geospatial" + "http-tools" ] }, { - "uid": "github/ropensci/bittrex", - "url": "https://github.com/ropensci/bittrex", - "rel": "/software/repository/github/ropensci/bittrex", + "uid": "github/ropensci/wikitaxa", + "url": "https://github.com/ropensci/wikitaxa", + "rel": "/software/repository/github/ropensci/wikitaxa", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A R Client for the Bittrex Crypto-Currency Exchange", + "description": "taxonomy data from Wikipedia/Wikidata/Wikispecies", "topics": [ - "crypto-currency-exchanges", - "finance", + "taxonomy", + "wikipedia-api", + "wikispecies", "r", "rstats", "r-package", - "peer-reviewed", - "cryptocurency-exchange", - "cryptocurrency", - "data-access" + "taxize", + "API", + "species", + "vernacular", + "web-services", + "Wikicommons", + "Wikipedia", + "Wikispecies" ] }, { @@ -7459,68 +7331,20 @@ ] }, { - "uid": "github/ropensci/nlrx", - "url": "https://github.com/ropensci/nlrx", - "rel": "/software/repository/github/ropensci/nlrx", + "uid": "github/ropensci/wdman", + "url": "https://github.com/ropensci/wdman", + "rel": "/software/repository/github/ropensci/wdman", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "nlrx NetLogo R", + "description": "Webdriver/Selenium Binary Manager", "topics": [ - "peer-reviewed", - "netlogo", - "individual-based-modelling", - "agent-based-modeling", "r", + "selenium", + "webdriver", + "webdriver-manager", + "rselenium", "r-package", "rstats", - "scalereprod" - ] - }, - { - "uid": "github/ropensci/rgnparser", - "url": "https://github.com/ropensci/rgnparser", - "rel": "/software/repository/github/ropensci/rgnparser", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Parse scientific names using gnparser (https://github.com/gnames/gnparser)", - "topics": [ - "r", - "rstats", - "taxonomy", - "r-package" - ] - }, - { - "uid": "github/ropensci/censo2017", - "url": "https://github.com/ropensci/censo2017", - "rel": "/software/repository/github/ropensci/censo2017", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Una Base de Datos de Alto Rendimiento del Censo 2017 de Chile.", - "topics": [ - "chile", - "censo", - "census", - "demografia", - "demographics", - "rstats", - "redatam", - "duckdb", - "data-access" - ] - }, - { - "uid": "github/ropensci/rdataretriever", - "url": "https://github.com/ropensci/rdataretriever", - "rel": "/software/repository/github/ropensci/rdataretriever", - "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", - "description": "R interface to the Data Retriever", - "topics": [ - "science", - "data", - "data-science", - "database", - "datasets", - "r", - "rstats", - "r-package" + "http-tools" ] }, { @@ -7542,1881 +7366,1960 @@ ] }, { - "uid": "github/ropensci/rcol", - "url": "https://github.com/ropensci/rcol", - "rel": "/software/repository/github/ropensci/rcol", + "uid": "github/ropensci/googleLanguageR", + "url": "https://github.com/ropensci/googleLanguageR", + "rel": "/software/repository/github/ropensci/googleLanguageR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "client for Catalogue of Life REST API", + "description": "R client for the Google Translation API, Google Cloud Natural Language API and Google Cloud Speech API", "topics": [ - "taxonomy", - "api-client", - "rstats", + "cloud-speech-api", + "cloud-translation-api", + "translation-api", + "googleauthr", + "google-api-client", "r", - "API", - "biology", - "science", - "species", - "web", - "data-access" + "rstats", + "google-cloud-speech", + "google-cloud", + "sentiment-analysis", + "google-nlp", + "natural-language-processing", + "speech-api", + "r-package", + "peer-reviewed", + "literature" ] }, { - "uid": "github/ropensci/neotoma", - "url": "https://github.com/ropensci/neotoma", - "rel": "/software/repository/github/ropensci/neotoma", + "uid": "github/ropensci/bomrang", + "url": "https://github.com/ropensci/bomrang", + "rel": "/software/repository/github/ropensci/bomrang", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Programmatic R interface to the Neotoma Paleoecological Database.", + "description": "Australian government Bureau of Meteorology (BOM) data client for R", "topics": [ + "bom", + "meteorological-data", + "weather-forecast", + "australia", + "weather", + "weather-data", + "meteorology", "r", "rstats", + "australia-bureau-of-meteorology", "r-package", - "neotoma-database", - "neotoma-apis", - "neotoma", - "cran", - "paleoecology", - "nsf", + "peer-reviewed", "data-access" ] }, { - "uid": "github/ropensci/outsider", - "url": "https://github.com/ropensci/outsider", - "rel": "/software/repository/github/ropensci/outsider", + "uid": "github/ropensci/rmangal", + "url": "https://github.com/ropensci/rmangal", + "rel": "/software/repository/github/ropensci/rmangal", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":black_square_button::registered: Install and run programs, outside of R, inside of R", + "description": "Retrieve and explore data from the ecological interactions database MANGAL", "topics": [ - "docker", + "datapublications", + "ecology", + "foodwebs", + "interactions", + "networks", + "openaccess", + "data-access" + ] + }, + { + "uid": "github/ropensci/chirps", + "url": "https://github.com/ropensci/chirps", + "rel": "/software/repository/github/ropensci/chirps", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "API Client for CHIRPS", + "topics": [ + "climatology", + "precipitation-data", "rstats", - "reproducibility", - "scalereprod" + "chirps" ] }, { - "uid": "github/ropensci/rdryad", - "url": "https://github.com/ropensci/rdryad", - "rel": "/software/repository/github/ropensci/rdryad", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for Dryad web services", + "uid": "github/ropensci/plotly", + "url": "https://github.com/ropensci/plotly", + "rel": "/software/repository/github/ropensci/plotly", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "An interactive graphing library for R", "topics": [ - "dryad-api", - "dryad", - "data", - "doi", - "oai-pmh", "r", + "ggplot2", + "javascript", + "data-visualization", + "d3js", + "shiny", + "plotly", + "webgl", "rstats", - "r-package", - "data-access" + "r-package" ] }, { - "uid": "github/ropensci/USAboundaries", - "url": "https://github.com/ropensci/USAboundaries", - "rel": "/software/repository/github/ropensci/USAboundaries", + "uid": "github/ropensci/staypuft", + "url": "https://github.com/ropensci/staypuft", + "rel": "/software/repository/github/ropensci/staypuft", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Historical and Contemporary Boundaries of the United States of America", + "description": "convert objects to and from R data structures", "topics": [ - "spatial-data", - "history", - "digital-history", + "marshmallow", + "data-structures", + "serialization", + "deserialization", + "validation", "r", "rstats", + "r-port", "r-package", - "data-access" + "data", + "schema", + "serlialization", + "types", + "scalereprod" ] }, { - "uid": "github/ropensci/beastier", - "url": "https://github.com/ropensci/beastier", - "rel": "/software/repository/github/ropensci/beastier", + "uid": "github/ropensci/stats19", + "url": "https://github.com/ropensci/stats19", + "rel": "/software/repository/github/ropensci/stats19", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to run BEAST2", + "description": "R package for working with open road traffic casualty data from Great Britain", "topics": [ "r", "r-package", "rstats", - "scalereprod" + "car-crashes", + "data", + "road-safety", + "ropensci", + "stats19", + "transport", + "data-access" ] }, { - "uid": "github/ropensci/opencontext", - "url": "https://github.com/ropensci/opencontext", - "rel": "/software/repository/github/ropensci/opencontext", + "uid": "github/ropensci/BaseSet", + "url": "https://github.com/ropensci/BaseSet", + "rel": "/software/repository/github/ropensci/BaseSet", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "API Client for the Open Context Archeological Database", + "description": "Provides classes for working with sets", "topics": [ "r", - "rstats", + "sets", + "package", "r-package", - "data-access" + "bioconductor-package", + "bioconductor", + "scalereprod" ] }, { - "uid": "github/ropensci/virtuoso", - "url": "https://github.com/ropensci/virtuoso", - "rel": "/software/repository/github/ropensci/virtuoso", + "uid": "github/ropensci/taxadb", + "url": "https://github.com/ropensci/taxadb", + "rel": "/software/repository/github/ropensci/taxadb", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: Interact with Virtuoso Open Source database instances from R", + "description": ":package: Taxonomic Database", "topics": [ - "databases" + "taxonomy" ] }, { - "uid": "github/ropensci/skynet", - "url": "https://github.com/ropensci/skynet", - "rel": "/software/repository/github/ropensci/skynet", + "uid": "github/ropensci/infx", + "url": "https://github.com/ropensci/infx", + "rel": "/software/repository/github/ropensci/infx", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Generates networks from BTS DB1B/T-100 data", + "description": "Access to InfectX/TargetInfectX screening data from R", "topics": [ - "db1b", - "transtats", - "bureau-of-transport-statistics", - "bts", - "rita", - "t100", - "air-transport", - "skynet", - "peer-reviewed", "r", "r-package", + "api-client", + "openbis", + "peer-reviewed", "rstats", "data-access" ] }, { - "uid": "github/ropensci/outsider.devtools", - "url": "https://github.com/ropensci/outsider.devtools", - "rel": "/software/repository/github/ropensci/outsider.devtools", + "uid": "github/ropensci/rfishbase", + "url": "https://github.com/ropensci/rfishbase", + "rel": "/software/repository/github/ropensci/rfishbase", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Build your own modules for `outsider`", + "description": "R interface to the fishbase.org database", "topics": [ - "rstats", - "docker", - "scalereprod" - ] - }, - { - "uid": "github/ropensci/phylocomr", - "url": "https://github.com/ropensci/phylocomr", - "rel": "/software/repository/github/ropensci/phylocomr", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Phylocom R interface", - "topics": [ - "evolution", - "ecology", - "community-ecology", - "r", + "r", "rstats", "r-package", - "characterevolution", - "communitystructure", - "Phylocom", - "phylodiversity", - "phylogeny", - "species", - "data-extraction" + "fishbase", + "taxonomy", + "fish", + "data-access" ] }, { - "uid": "github/ropensci/crul", - "url": "https://github.com/ropensci/crul", - "rel": "/software/repository/github/ropensci/crul", + "uid": "github/ropensci/biomartr", + "url": "https://github.com/ropensci/biomartr", + "rel": "/software/repository/github/ropensci/biomartr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R6 based http client for R (made for developers)", + "description": "Genomic Data Retrieval with R", "topics": [ - "http", - "curl", - "async", - "rstats", - "api", "r", + "genome-retrieval", + "biomart", + "database-retrieval", + "ncbi-genbank", + "genomics", + "ensembl-servers", + "sequenced-genomes", + "proteome", + "genome", + "genome-annotation", + "metagenomics", + "meta-analysis", + "rstats", "r-package", - "API", - "caching", - "download", - "https", - "libcurl", - "mocking", - "web-services", - "http-tools" + "peer-reviewed", + "annotation-retrieval", + "biological-data-retrieval", + "BioMart", + "ENSEMBL", + "genomic-data-retrieval", + "NCBI", + "data-access" ] }, { - "uid": "github/ropensci/phonfieldwork", - "url": "https://github.com/ropensci/phonfieldwork", - "rel": "/software/repository/github/ropensci/phonfieldwork", + "uid": "github/ropensci/mcbette", + "url": "https://github.com/ropensci/mcbette", + "rel": "/software/repository/github/ropensci/mcbette", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for phonetic research and experimenting", + "description": "Model Comparison using babette", "topics": [ - "r", - "phonetics", - "phonology", - "fieldwork", - "praat", - "textgrid", - "elan", - "eaf", - "exmaralda", - "exb", - "flextext", - "audacity", - "srt-subtitles", - "data-extraction" + "scalereprod" ] }, { - "uid": "github/ropensci/fulltext", - "url": "https://github.com/ropensci/fulltext", - "rel": "/software/repository/github/ropensci/fulltext", + "uid": "github/ropensci/babette", + "url": "https://github.com/ropensci/babette", + "rel": "/software/repository/github/ropensci/babette", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Search across and get full text for OA & closed journals", + "description": "babette is an R package to work with BEAST2", "topics": [ - "text-ming", - "pdf", - "metadata", - "open-access", - "xml", - "extract-text", - "crossref", - "rstats", "r", "r-package", - "citations", - "full-text", - "literature", - "publications", - "TDM", - "text-mining", - "literature" + "rstats", + "phylogenetics", + "beast2", + "bayesian-inference", + "scalereprod" ] }, { - "uid": "github/ropensci/plater", - "url": "https://github.com/ropensci/plater", - "rel": "/software/repository/github/ropensci/plater", + "uid": "github/ropensci/rdryad", + "url": "https://github.com/ropensci/rdryad", + "rel": "/software/repository/github/ropensci/rdryad", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Tools to make it easy to work with microtiter plate-shaped data", + "description": "R client for Dryad web services", "topics": [ + "dryad-api", + "dryad", + "data", + "doi", + "oai-pmh", "r", "rstats", "r-package", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/rglobi", - "url": "https://github.com/ropensci/rglobi", - "rel": "/software/repository/github/ropensci/rglobi", + "uid": "github/ropensci/arkdb", + "url": "https://github.com/ropensci/arkdb", + "rel": "/software/repository/github/ropensci/arkdb", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R library to access species interaction data of http://globalbioticinteractions.org", + "description": "Archive and unarchive databases as flat text files", "topics": [ + "database", + "archiving", "r", "rstats", + "dbi", + "peer-reviewed", "r-package", - "data-access" + "databases" ] }, { - "uid": "github/ropensci/landscapetools", - "url": "https://github.com/ropensci/landscapetools", - "rel": "/software/repository/github/ropensci/landscapetools", + "uid": "github/ropensci/nlrx", + "url": "https://github.com/ropensci/nlrx", + "rel": "/software/repository/github/ropensci/nlrx", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "\ud83d\udce6 R package for some of the less-glamorous tasks involved in landscape analysis \ud83c\udf0f", + "description": "nlrx NetLogo R", "topics": [ + "peer-reviewed", + "netlogo", + "individual-based-modelling", + "agent-based-modeling", "r", - "rstats", - "raster", - "landscape", - "landscape-ecology", - "visualization", - "workflow", "r-package", - "geospatial" + "rstats", + "scalereprod" ] }, { - "uid": "github/ropensci/patentsview", - "url": "https://github.com/ropensci/patentsview", - "rel": "/software/repository/github/ropensci/patentsview", + "uid": "github/ropensci/roadoi", + "url": "https://github.com/ropensci/roadoi", + "rel": "/software/repository/github/ropensci/roadoi", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An R client to the PatentsView API", + "description": "Use Unpaywall with R", "topics": [ - "patents", - "uspto", - "patentsview-api", + "open-access", + "oadoi", "r", + "webclient", + "code4lib", + "altmetrics", "rstats", - "patentsview", "r-package", "peer-reviewed", + "unpaywall", "literature" ] }, { - "uid": "github/ropensci/MODIStsp", - "url": "https://github.com/ropensci/MODIStsp", - "rel": "/software/repository/github/ropensci/MODIStsp", + "uid": "github/ropensci/av", + "url": "https://github.com/ropensci/av", + "rel": "/software/repository/github/ropensci/av", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "An \"R\" package for automatic download and preprocessing of MODIS Land Products Time Series", + "description": "Working with Video in R", "topics": [ - "modis", - "gdal", "r", - "preprocessing", - "time-series", - "remote-sensing", - "satellite-imagery", - "modis-data", - "modis-land-products", - "peer-reviewed", "r-package", "rstats", - "data-access" + "image-processing" ] }, { - "uid": "github/ropensci/binman", - "url": "https://github.com/ropensci/binman", - "rel": "/software/repository/github/ropensci/binman", + "uid": "github/ropensci/rusda", + "url": "https://github.com/ropensci/rusda", + "rel": "/software/repository/github/ropensci/rusda", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "A Binary Download Manager", + "description": "Interface to USDA Databases", "topics": [ "r", - "r-package", "rstats", - "http-tools" + "r-package", + "data-access" ] }, { - "uid": "github/ropensci/tokenizers", - "url": "https://github.com/ropensci/tokenizers", - "rel": "/software/repository/github/ropensci/tokenizers", + "uid": "github/ropensci/gittargets", + "url": "https://github.com/ropensci/gittargets", + "rel": "/software/repository/github/ropensci/gittargets", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Fast, Consistent Tokenization of Natural Language Text", + "description": "Data version control for reproducible analysis pipelines in R with {targets}.", "topics": [ - "text-mining", - "tokenizer", - "rstats", - "nlp", + "data-version-control", + "data-versioning", + "workflow", + "data-science", "r", + "reproducible-research", + "rstats", "r-package", - "peer-reviewed", - "scalereprod" + "reproducibility", + "targets" ] }, { - "uid": "github/ropensci/jenkins", - "url": "https://github.com/ropensci/jenkins", - "rel": "/software/repository/github/ropensci/jenkins", + "uid": "github/ropensci/awardFindR", + "url": "https://github.com/ropensci/awardFindR", + "rel": "/software/repository/github/ropensci/awardFindR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Simple Jenkins client for R", + "description": "Scan multiple online grant databases for relevant awards", "topics": [ - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/mapscanner", - "url": "https://github.com/ropensci/mapscanner", - "rel": "/software/repository/github/ropensci/mapscanner", + "uid": "github/ropensci/rcrossref", + "url": "https://github.com/ropensci/rcrossref", + "rel": "/software/repository/github/ropensci/rcrossref", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package to print maps, draw on them, and scan them back in", + "description": "R client for various CrossRef APIs", "topics": [ + "crossref-api", + "doi", + "metadata", + "api", + "r", + "rstats", + "api-wrapper", "r-package", - "maps", - "scan", - "spatial", - "geospatial" + "citations", + "Crossref", + "full-text", + "literature", + "pdf", + "publications", + "TDM", + "text-ming", + "xml", + "literature" ] }, { - "uid": "github/ropensci/rsvg", - "url": "https://github.com/ropensci/rsvg", - "rel": "/software/repository/github/ropensci/rsvg", + "uid": "github/ropensci/Rclean", + "url": "https://github.com/ropensci/Rclean", + "rel": "/software/repository/github/ropensci/Rclean", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "SVG renderer for R based on librsvg2", + "description": "Isolate essential code to re-produce specific results.", "topics": [ - "cairo", - "glib", - "librsvg", - "image-processing" + "scalereprod" ] }, { - "uid": "github/ropensci/jsonld", - "url": "https://github.com/ropensci/jsonld", - "rel": "/software/repository/github/ropensci/jsonld", + "uid": "github/ropensci/pathviewr", + "url": "https://github.com/ropensci/pathviewr", + "rel": "/software/repository/github/ropensci/pathviewr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R wrapper for jsonld.js JavaScript library", + "description": "\ud83d\udc26 Tools to import, clean, and visualize animal movement data in R", "topics": [ - "json-ld", - "r", + "movement-data", + "motion", + "animal-movement", + "optitrack", + "flydra", + "visual-guidance", + "visual-perception", "rstats", - "r-package", + "rstats-package", + "trajectory-analysis", + "trajectories", "data-extraction" ] }, { - "uid": "github/ropensci/spatsoc", - "url": "https://github.com/ropensci/spatsoc", - "rel": "/software/repository/github/ropensci/spatsoc", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": ":package: spatsoc is an R package for detecting spatial and temporal groups in GPS relocations. ", + "uid": "github/ropensci/drake", + "url": "https://github.com/ropensci/drake", + "rel": "/software/repository/github/ropensci/drake", + "avatar": "https://avatars3.githubusercontent.com/u/1200269?v=4", + "description": "An R-focused pipeline toolkit for reproducibility and high-performance computing", "topics": [ + "reproducibility", + "high-performance-computing", "r", - "spatial", - "social", - "gps", - "animal", - "network", - "r-package", + "data-science", + "drake", + "makefile", + "pipeline", + "workflow", + "reproducible-research", "rstats", - "geospatial" + "r-package", + "ropensci", + "peer-reviewed" ] }, { - "uid": "github/ropensci/popler", - "url": "https://github.com/ropensci/popler", - "rel": "/software/repository/github/ropensci/popler", + "uid": "github/ropensci/DataSpaceR", + "url": "https://github.com/ropensci/DataSpaceR", + "rel": "/software/repository/github/ropensci/DataSpaceR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "The R package to browse and query the popler database", + "description": "R Interface to the CAVD DataSpace", "topics": [ + "cavd-dataspace", "data-access" ] }, { - "uid": "github/ropensci/geonames", - "url": "https://github.com/ropensci/geonames", - "rel": "/software/repository/github/ropensci/geonames", + "uid": "github/ropensci/baRcodeR", + "url": "https://github.com/ropensci/baRcodeR", + "rel": "/software/repository/github/ropensci/baRcodeR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R package for accessing the geonames.org API", + "description": "Labeling, tracking, and organizing samples with 2D barcodes", "topics": [ - "r", - "rstats", - "r-package", - "geospatial" + "scalereprod" ] }, { - "uid": "github/ropensci/rcitoid", - "url": "https://github.com/ropensci/rcitoid", - "rel": "/software/repository/github/ropensci/rcitoid", + "uid": "github/ropensci/phylocomr", + "url": "https://github.com/ropensci/phylocomr", + "rel": "/software/repository/github/ropensci/phylocomr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Citation data via Wikimedia using the Citoid service ", + "description": "Phylocom R interface", "topics": [ + "evolution", + "ecology", + "community-ecology", "r", "rstats", - "api-client", - "wikimedia", - "citoid", - "doi", - "pmid", - "pmcid", - "isbn", "r-package", - "citations", - "Citoid", - "literature", - "publications", - "text-ming", - "Wikicite", - "Wikipedia", - "literature" + "characterevolution", + "communitystructure", + "Phylocom", + "phylodiversity", + "phylogeny", + "species", + "data-extraction" ] }, { - "uid": "github/ropensci/tinkr", - "url": "https://github.com/ropensci/tinkr", - "rel": "/software/repository/github/ropensci/tinkr", + "uid": "github/ropensci/spiro", + "url": "https://github.com/ropensci/spiro", + "rel": "/software/repository/github/ropensci/spiro", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Convert (R)Markdown files to XML, edit them, write them back as (R)Markdown", + "description": "Work with data from cardiopulmonary exercise testing", + "topics": [] + }, + { + "uid": "github/ropensci/popler", + "url": "https://github.com/ropensci/popler", + "rel": "/software/repository/github/ropensci/popler", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "The R package to browse and query the popler database", + "topics": [ + "data-access" + ] + }, + { + "uid": "github/ropensci/webchem", + "url": "https://github.com/ropensci/webchem", + "rel": "/software/repository/github/ropensci/webchem", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Chemical Information from the Web", "topics": [ + "rstats", + "ropensci", + "chemical-information", + "webscraping", + "cas-number", + "chemspider", + "identifier", "r", "r-package", - "rstats", - "xpath", - "commonmark", - "xml", - "scalereprod" + "data-access" ] }, { - "uid": "github/ropensci/jagstargets", - "url": "https://github.com/ropensci/jagstargets", - "rel": "/software/repository/github/ropensci/jagstargets", + "uid": "github/ropensci/outcomerate", + "url": "https://github.com/ropensci/outcomerate", + "rel": "/software/repository/github/ropensci/outcomerate", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Reproducible Bayesian data analysis pipelines with targets and JAGS", + "description": "AAPOR Survey Outcome Rates", "topics": [ "r", + "survey", + "aapor", + "standards", + "disposition-codes", + "peer-reviewed", + "r-package", "rstats", - "reproducibility", - "high-performance-computing", - "bayesian", - "jags", - "rjags", - "statistics", - "targets", - "make", - "rstats-package", - "r-targetopia" + "scalereprod" ] }, { - "uid": "github/ropensci/europepmc", - "url": "https://github.com/ropensci/europepmc", - "rel": "/software/repository/github/ropensci/europepmc", + "uid": "github/ropensci/emld", + "url": "https://github.com/ropensci/emld", + "rel": "/software/repository/github/ropensci/emld", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R Interface to Europe PMC RESTful Web Service", + "description": ":package: JSON-LD representation of EML", "topics": [ - "europe-pmc", - "r", - "rstats", - "bibliometrics", - "scientific-literature", - "scientific-publications", - "r-package", - "pubmed", - "pubmedcentral", - "literature" + "data-extraction" ] }, { - "uid": "github/ropensci/EML", - "url": "https://github.com/ropensci/EML", - "rel": "/software/repository/github/ropensci/EML", + "uid": "github/ropensci/osfr", + "url": "https://github.com/ropensci/osfr", + "rel": "/software/repository/github/ropensci/osfr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": " Ecological Metadata Language interface for R: synthesis and integration of heterogenous data", + "description": "R interface to the Open Science Framework (OSF)", "topics": [ - "metadata-standard", - "eml", - "eml-metadata", - "r", - "rstats", - "r-package", - "data-publication" + "osf", + "open-science", + "reproducible-research", + "scalereprod" ] }, { - "uid": "github/ropensci/ramlegacy", - "url": "https://github.com/ropensci/ramlegacy", - "rel": "/software/repository/github/ropensci/ramlegacy", + "uid": "github/ropensci/rWBclimate", + "url": "https://github.com/ropensci/rWBclimate", + "rel": "/software/repository/github/ropensci/rWBclimate", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R :package: to download, cache and read in different versions of the RAM Legacy Stock Assessment Data Base, an online compilation of stock assessment results for commercially exploited marine populations from around the world.", + "description": "R interface for the World Bank climate data", "topics": [ "r", "rstats", "r-package", - "ropensci", - "ramlegacy", - "stock-assessment", - "marine-biology", - "fisheries", "data-access" ] }, { - "uid": "github/ropensci/dbparser", - "url": "https://github.com/ropensci/dbparser", - "rel": "/software/repository/github/ropensci/dbparser", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Source code for the R package, \"dbparser\" (i.e. DrugBank Parser)", + "uid": "github/ropensci/rredlist", + "url": "https://github.com/ropensci/rredlist", + "rel": "/software/repository/github/ropensci/rredlist", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "IUCN Red List API Client", "topics": [ + "conservation", + "api-wrapper", + "biodiversity", + "rstats", + "iucn-red-list", + "iucn", + "r", + "r-package", + "taxize", + "API", + "habitat", + "IUCN", + "species", + "traits", + "web-services", "data-access" ] }, { - "uid": "github/ropensci/rvertnet", - "url": "https://github.com/ropensci/rvertnet", - "rel": "/software/repository/github/ropensci/rvertnet", + "uid": "github/ropensci/readODS", + "url": "https://github.com/ropensci/readODS", + "rel": "/software/repository/github/ropensci/readODS", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Wrapper to the VertNet API", + "description": "read ODS files into R as data.frames", + "topics": [] + }, + { + "uid": "github/ropensci/rbace", + "url": "https://github.com/ropensci/rbace", + "rel": "/software/repository/github/ropensci/rbace", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "BASE R client", "topics": [ "api-wrapper", - "biodiversity", - "specimen", + "scholarly-metadata", "rstats", - "vertnet", "r", - "spocc", "r-package", - "mammalia", - "mammals", - "maps", - "occurrences", - "species", - "specimens", + "citations", + "literature", + "scholarly", + "search", + "text-ming", "data-access" ] }, { - "uid": "github/ropensci/rnaturalearthdata", - "url": "https://github.com/ropensci/rnaturalearthdata", - "rel": "/software/repository/github/ropensci/rnaturalearthdata", + "uid": "github/ropensci/hoardr", + "url": "https://github.com/ropensci/hoardr", + "rel": "/software/repository/github/ropensci/hoardr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "to hold data used by rnaturalearth", + "description": "manage cached files", "topics": [ + "caching", "r", + "rstats", "r-package", + "data", + "files", + "pdf", + "xml", + "scalereprod" + ] + }, + { + "uid": "github/ropensci/dittodb", + "url": "https://github.com/ropensci/dittodb", + "rel": "/software/repository/github/ropensci/dittodb", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "dittodb: A Test Environment for DB Queries in R", + "topics": [ + "databases" + ] + }, + { + "uid": "github/ropensci/landscapetools", + "url": "https://github.com/ropensci/landscapetools", + "rel": "/software/repository/github/ropensci/landscapetools", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "\ud83d\udce6 R package for some of the less-glamorous tasks involved in landscape analysis \ud83c\udf0f", + "topics": [ + "r", "rstats", + "raster", + "landscape", + "landscape-ecology", + "visualization", + "workflow", + "r-package", "geospatial" ] }, { - "uid": "github/ropensci/rerddap", - "url": "https://github.com/ropensci/rerddap", - "rel": "/software/repository/github/ropensci/rerddap", + "uid": "github/ropensci/aRxiv", + "url": "https://github.com/ropensci/aRxiv", + "rel": "/software/repository/github/ropensci/aRxiv", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "R client for working with ERDDAP servers", + "description": "Programmatic interface to the Arxiv API", "topics": [ - "rstats", - "erddap", - "noaa-data", - "api-client", + "arxiv-api", + "arxiv", + "arxiv-org", + "arxiv-analytics", "r", + "rstats", "r-package", - "buoy", - "climate", - "earth", - "NOAA", - "precipitation", - "science", - "storm", - "temperature", - "data-access" + "literature" ] }, { - "uid": "github/ropensci/mauricer", - "url": "https://github.com/ropensci/mauricer", - "rel": "/software/repository/github/ropensci/mauricer", + "uid": "github/ropensci/vcr", + "url": "https://github.com/ropensci/vcr", + "rel": "/software/repository/github/ropensci/vcr", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Install BEAST2 packages from R", + "description": "Record HTTP calls and replay them", "topics": [ + "unit-testing", + "testing", + "mocking", + "rstats", + "vcr", "r", "r-package", - "rstats", - "scalereprod" + "API", + "curl", + "http", + "http-mocking", + "https", + "mock", + "tdd", + "testing-tools", + "web-services", + "http-tools" ] }, { - "uid": "github/ropensci/rfisheries", - "url": "https://github.com/ropensci/rfisheries", - "rel": "/software/repository/github/ropensci/rfisheries", + "uid": "github/ropensci/hunspell", + "url": "https://github.com/ropensci/hunspell", + "rel": "/software/repository/github/ropensci/hunspell", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "package for interacting with fisheries databases at openfisheries.org", + "description": "High-Performance Stemmer, Tokenizer, and Spell Checker for R", "topics": [ - "fisheries", - "open-data", - "openfisheries", + "spellchecker", + "hunspell", + "stemmer", + "tokenizer", + "spell-check", "r", "rstats", "r-package", - "data-access" + "literature" ] }, { - "uid": "github/ropensci/seasl", - "url": "https://github.com/ropensci/seasl", - "rel": "/software/repository/github/ropensci/seasl", + "uid": "github/ropensci/rfema", + "url": "https://github.com/ropensci/rfema", + "rel": "/software/repository/github/ropensci/rfema", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Load CSL styles and locales in R, and inspect contents", + "description": " rfema allows users to access The Federal Emergency Management Agency's (FEMA) publicly available data through their API. The package provides a set of functions to easily navigate and access data from the National Flood Insurance Program along and FEMA's various disaster aid programs.", + "topics": [] + }, + { + "uid": "github/ropensci/taxlist", + "url": "https://github.com/ropensci/taxlist", + "rel": "/software/repository/github/ropensci/taxlist", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Handling taxonomic lists", + "topics": [ + "taxonomy" + ] + }, + { + "uid": "github/ropensci/nomisr", + "url": "https://github.com/ropensci/nomisr", + "rel": "/software/repository/github/ropensci/nomisr", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Access UK official statistics from the Nomis database through R.", "topics": [ "r", - "r-package", + "geographic-data", + "census-data", + "uk", + "demography", + "api-client", "rstats", - "citeproc", - "citations", - "literature", - "parse", - "style", - "text-ming", - "literature" + "officialstatistics", + "official-statistics", + "national-statistics", + "r-package", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/ropensci/CoordinateCleaner", - "url": "https://github.com/ropensci/CoordinateCleaner", - "rel": "/software/repository/github/ropensci/CoordinateCleaner", + "uid": "github/ropensci/tradestatistics", + "url": "https://github.com/ropensci/tradestatistics", + "rel": "/software/repository/github/ropensci/tradestatistics", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Automated flagging of common spatial and temporal errors in biological and palaeontological collection data, for the use in conservation, ecology and palaeontology.", + "description": "R package to access Open Trade Statistics API", "topics": [ "r", "r-package", "rstats", - "data-extraction" + "open-trade-statistics", + "api-wrapper", + "international-trade", + "data-table", + "jsonlite", + "data-access" ] }, { - "uid": "github/ropensci/timefuzz", - "url": "https://github.com/ropensci/timefuzz", - "rel": "/software/repository/github/ropensci/timefuzz", + "uid": "github/ropensci/magick", + "url": "https://github.com/ropensci/magick", + "rel": "/software/repository/github/ropensci/magick", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Time Travel to Test Time Dependent Code", + "description": "Magic, madness, heaven, sin", "topics": [ + "magick", + "imagemagick-wrapper", + "image-processing", + "image-manipulation", "r", "rstats", - "testing", - "tdd", - "time-dependent", - "r-package", - "scalereprod" + "image-magick", + "imagemagick", + "r-package" ] }, { - "uid": "github/ropensci/stantargets", - "url": "https://github.com/ropensci/stantargets", - "rel": "/software/repository/github/ropensci/stantargets", + "uid": "github/ropensci/DataPackageR", + "url": "https://github.com/ropensci/DataPackageR", + "rel": "/software/repository/github/ropensci/DataPackageR", "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Reproducible Bayesian data analysis pipelines with targets and cmdstanr", + "description": "An R package to enable reproducible data processing, packaging and sharing.", "topics": [ "r", - "rstats", + "r-package", "reproducibility", - "high-performance-computing", - "stan", - "bayesian", - "statistics", - "targets", - "make", - "rstats-package", - "r-targetopia" + "rstats", + "peer-reviewed", + "scalereprod" ] }, { - "uid": "github/jsobeck/MOOG_SCAT", - "url": "https://github.com/jsobeck/MOOG_SCAT", - "rel": "/software/repository/github/jsobeck/MOOG_SCAT", - "avatar": "https://avatars.githubusercontent.com/u/11219564?v=4", - "description": "Repository for the latest version of the MOOG_SCAT code", + "uid": "github/q1cui/discourseGT", + "url": "https://github.com/q1cui/discourseGT", + "rel": "/software/repository/github/q1cui/discourseGT", + "avatar": "https://avatars.githubusercontent.com/u/85658927?v=4", + "description": "discourseGT \u2014 Analyze Group Patterns using Graph Theory in Educational Settings", "topics": [] }, { - "uid": "github/ot483/NetCom", - "url": "https://github.com/ot483/NetCom", - "rel": "/software/repository/github/ot483/NetCom", - "avatar": "https://avatars.githubusercontent.com/u/78791373?v=4", - "description": null, + "uid": "github/jydu/maffilter", + "url": "https://github.com/jydu/maffilter", + "rel": "/software/repository/github/jydu/maffilter", + "avatar": "https://avatars.githubusercontent.com/u/11715877?v=4", + "description": "The MafFilter genome alignment processor", "topics": [] }, { - "uid": "github/chasmani/piecewise-regression", - "url": "https://github.com/chasmani/piecewise-regression", - "rel": "/software/repository/github/chasmani/piecewise-regression", - "avatar": "https://avatars.githubusercontent.com/u/6584368?v=4", - "description": "piecewise-regression (aka segmented regression) in python. For fitting straight line models to data with one or more breakpoints where the gradient changes. ", - "topics": [ - "segmented-regression", - "piecewise-regression", - "regression", - "data-analysis", - "statistics", - "model-fitting", - "linear-regression", - "python3" - ] + "uid": "github/jydu/physamp", + "url": "https://github.com/jydu/physamp", + "rel": "/software/repository/github/jydu/physamp", + "avatar": "https://avatars.githubusercontent.com/u/11715877?v=4", + "description": "Phylogenetic Sampling and Optimization of sequence alignments", + "topics": [] }, { - "uid": "github/RenneLab/hybkit", - "url": "https://github.com/RenneLab/hybkit", - "rel": "/software/repository/github/RenneLab/hybkit", - "avatar": "https://avatars.githubusercontent.com/u/34487862?v=4", - "description": "Toolkit for analysis of \".hyb\" format nucleotide sequence data from chimeric RNA experiments.", - "topics": [ - "genomics", - "bioinformatics", - "bioinformatics-tool", - "bioinformatics-pipeline", - "ribonomics", - "hyb", - "clash", - "qclash" - ] + "uid": "github/bommert/stabm", + "url": "https://github.com/bommert/stabm", + "rel": "/software/repository/github/bommert/stabm", + "avatar": "https://avatars.githubusercontent.com/u/16881642?v=4", + "description": "Stability measures", + "topics": [] }, { - "uid": "github/jah1994/PyTorchDIA", - "url": "https://github.com/jah1994/PyTorchDIA", - "rel": "/software/repository/github/jah1994/PyTorchDIA", - "avatar": "https://avatars.githubusercontent.com/u/58561474?v=4", - "description": "PyTorchDIA is a Difference Image Analysis tool. It is built around the PyTorch machine learning framework, and uses automatic differentiation and (optional) GPU support to perform lightning fast optimisations of image models.", + "uid": "github/vosjo/speedyfit", + "url": "https://github.com/vosjo/speedyfit", + "rel": "/software/repository/github/vosjo/speedyfit", + "avatar": "https://avatars.githubusercontent.com/u/2445164?v=4", + "description": "Python package to fit single and binary photometric SEDs. Automatically pull archive photometry from the main surveys and use Bayesian inference to derive atmospheric parameters.", "topics": [ - "image-processing", - "astronomy" + "photometry", + "mcmc", + "atmospheric-modelling", + "astronomy", + "python" ] }, { - "uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", - "url": "https://github.com/eXtremeGravityInstitute/LISA-Massive-Black-Hole", - "rel": "/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", - "avatar": "https://avatars.githubusercontent.com/u/37002921?v=4", + "uid": "github/UtrechtUniversity/raster_extraction", + "url": "https://github.com/UtrechtUniversity/raster_extraction", + "rel": "/software/repository/github/UtrechtUniversity/raster_extraction", + "avatar": "https://avatars.githubusercontent.com/u/11516575?v=4", "description": null, "topics": [] }, { - "uid": "github/eXtremeGravityInstitute/QuickCBC", - "url": "https://github.com/eXtremeGravityInstitute/QuickCBC", - "rel": "/software/repository/github/eXtremeGravityInstitute/QuickCBC", - "avatar": "https://avatars.githubusercontent.com/u/37002921?v=4", - "description": "Rapid and Reliable Inference for Binary Mergers", - "topics": [] - }, - { - "uid": "github/cosmicrays/hermes", - "url": "https://github.com/cosmicrays/hermes", - "rel": "/software/repository/github/cosmicrays/hermes", - "avatar": "https://avatars.githubusercontent.com/u/20685298?v=4", - "description": "HERMES is a publicly available computational framework for the line of sight integration over galactic radiative processes which creates sky maps in the HEALPix-compatibile format.", + "uid": "github/danmoser/pyhdust", + "url": "https://github.com/danmoser/pyhdust", + "rel": "/software/repository/github/danmoser/pyhdust", + "avatar": "https://avatars.githubusercontent.com/u/2973004?v=4", + "description": "Analysis tools for multi-technique astronomical data and hdust models", "topics": [ - "astroparticle-physics", - "gamma-ray-astronomy", - "neutrino-astronomy", - "synchrotron", - "cosmic-rays", - "galactic-radiative-processes", - "healpix" + "python", + "astronomy", + "astrophysics" ] }, { - "uid": "github/cosmicrays/DRAGON", - "url": "https://github.com/cosmicrays/DRAGON", - "rel": "/software/repository/github/cosmicrays/DRAGON", - "avatar": "https://avatars.githubusercontent.com/u/20685298?v=4", - "description": "First version of the code - last update Dec 2015", + "uid": "github/AllenInstitute/bmtk", + "url": "https://github.com/AllenInstitute/bmtk", + "rel": "/software/repository/github/AllenInstitute/bmtk", + "avatar": "https://avatars.githubusercontent.com/u/1848392?v=4", + "description": "Brain Modeling Toolkit", "topics": [ - "cosmic-rays", - "dark-matter", - "interstellar-medium", - "astroparticle", - "radiative-processes", - "gamma-ray-astronomy", - "neutrino-astronomy" + "neuroscience", + "modeling", + "simulation", + "python", + "neural-networks", + "neuroinformatics", + "neuron" ] }, { - "uid": "github/amberbiology/scribl", - "url": "https://github.com/amberbiology/scribl", - "rel": "/software/repository/github/amberbiology/scribl", - "avatar": "https://avatars.githubusercontent.com/u/14062141?v=4", - "description": "Semantic Capture of Relationships In Biological Literature (scribl) ", - "topics": [ - "computational-biology", - "literature-mining", - "network-biology", - "systems-biology" - ] + "uid": "github/dzerbino/velvet", + "url": "https://github.com/dzerbino/velvet", + "rel": "/software/repository/github/dzerbino/velvet", + "avatar": "https://avatars.githubusercontent.com/u/33239?v=4", + "description": "Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research, 18: 821-829", + "topics": [] }, { - "uid": "github/ConorMacBride/mcalf", - "url": "https://github.com/ConorMacBride/mcalf", - "rel": "/software/repository/github/ConorMacBride/mcalf", - "avatar": "https://avatars.githubusercontent.com/u/25007832?v=4", - "description": "MCALF: Multi-Component Atmospheric Line Fitting", + "uid": "github/willvousden/ptemcee", + "url": "https://github.com/willvousden/ptemcee", + "rel": "/software/repository/github/willvousden/ptemcee", + "avatar": "https://avatars.githubusercontent.com/u/152388?v=4", + "description": "A parallel-tempered version of emcee.", "topics": [] }, { - "uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", - "url": "https://github.com/Muhammad-Arif-NUST/BVP_Pred_Unb", - "rel": "/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", - "avatar": "https://avatars2.githubusercontent.com/u/27894155?v=4", - "description": null, + "uid": "github/chfeder/turbulence_generator", + "url": "https://github.com/chfeder/turbulence_generator", + "rel": "/software/repository/github/chfeder/turbulence_generator", + "avatar": "https://avatars.githubusercontent.com/u/11024175?v=4", + "description": "Turbulence driving and initial conditions generator", "topics": [] }, { - "uid": "github/vfonov/DARQ", - "url": "https://github.com/vfonov/DARQ", - "rel": "/software/repository/github/vfonov/DARQ", - "avatar": "https://avatars.githubusercontent.com/u/628822?v=4", - "description": "Deep learning of quality control for stereotaxic registration of human brain MRI", + "uid": "github/candYgene/abg-ld", + "url": "https://github.com/candYgene/abg-ld", + "rel": "/software/repository/github/candYgene/abg-ld", + "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", + "description": "Linked Data Platform for Animal Breeding & Genomics", "topics": [ - "deep-learning", - "pytorch", - "mri", - "registration", - "qc" + "linked-data", + "rdf", + "virtuoso-server", + "genome-annotation", + "qtl", + "triples", + "sparql", + "genomics", + "animal-breeding", + "database" ] }, { - "uid": "github/AninaTimmermann/ECCOplanets", - "url": "https://github.com/AninaTimmermann/ECCOplanets", - "rel": "/software/repository/github/AninaTimmermann/ECCOplanets", - "avatar": "https://avatars.githubusercontent.com/u/111730996?v=4", - "description": "Python code to simulate the formation of rocky planets in chemical equilibrium (based on Gibbs energy minimisation) and analysis of planet compositions.", + "uid": "github/candYgene/pbg-ld", + "url": "https://github.com/candYgene/pbg-ld", + "rel": "/software/repository/github/candYgene/pbg-ld", + "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", + "description": "Linked Data Platform for Plant Breeding & Genomics", "topics": [ - "chemical-equilibrium", - "planet-formation", - "planet-composition", - "rocky-planets" + "linked-data", + "rdf", + "virtuoso-server", + "genome-annotation", + "qtl", + "triples", + "sparql", + "genomics", + "plant-breeding", + "solanaceae" ] }, { - "uid": "github/haowang-astro/jetsimpy", - "url": "https://github.com/haowang-astro/jetsimpy", - "rel": "/software/repository/github/haowang-astro/jetsimpy", - "avatar": "https://avatars.githubusercontent.com/u/144850029?v=4", - "description": "A hydrodynamic model of gamma-ray burst jet and afterglow", + "uid": "github/candYgene/QTM", + "url": "https://github.com/candYgene/QTM", + "rel": "/software/repository/github/candYgene/QTM", + "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", + "description": "QTLTableMiner++ tool for mining tables in scientific articles", "topics": [] }, { - "uid": "github/cheng-zhao/FCFC", - "url": "https://github.com/cheng-zhao/FCFC", - "rel": "/software/repository/github/cheng-zhao/FCFC", - "avatar": "https://avatars.githubusercontent.com/u/13256863?v=4", - "description": "Fast Correlation Function Calculator", + "uid": "github/candYgene/siga", + "url": "https://github.com/candYgene/siga", + "rel": "/software/repository/github/candYgene/siga", + "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", + "description": "Semantically Interoperable Genome Annotations", "topics": [ - "correlation-function", - "cosmology", - "large-scale-structure-cosmology", - "galaxy-clustering", - "pair-counting", - "radial-distribution-function", - "pair-correlation-function" + "rdf", + "rdflib", + "genome-annotation", + "gff", + "triples" ] }, { - "uid": "github/peikuan/WBBC", - "url": "https://github.com/peikuan/WBBC", - "rel": "/software/repository/github/peikuan/WBBC", - "avatar": "https://avatars.githubusercontent.com/u/103729199?v=4", - "description": "Westlake BioBank for Chinese pilot project", + "uid": "github/UgoLomoio/gtex_visualizer", + "url": "https://github.com/UgoLomoio/gtex_visualizer", + "rel": "/software/repository/github/UgoLomoio/gtex_visualizer", + "avatar": "https://avatars.githubusercontent.com/u/87126937?v=4", + "description": null, "topics": [] }, { - "uid": "github/jeffdaily/parasail-python", - "url": "https://github.com/jeffdaily/parasail-python", - "rel": "/software/repository/github/jeffdaily/parasail-python", - "avatar": "https://avatars.githubusercontent.com/u/904248?v=4", - "description": "Python bindings for the parasail C library.", + "uid": "github/quantum-exeter/SpiDy.jl", + "url": "https://github.com/quantum-exeter/SpiDy.jl", + "rel": "/software/repository/github/quantum-exeter/SpiDy.jl", + "avatar": "https://avatars.githubusercontent.com/u/99965031?v=4", + "description": ":spider: Non-Markovian stochastic SPIn (and harmonic oscillator) DYnamics. ", + "topics": [ + "open-systems", + "spin-dynamics", + "harmonic-oscillator", + "stochastic" + ] + }, + { + "uid": "github/wen-jams/bsavi", + "url": "https://github.com/wen-jams/bsavi", + "rel": "/software/repository/github/wen-jams/bsavi", + "avatar": "https://avatars.githubusercontent.com/u/40677090?v=4", + "description": "Interactive visualizer for high-dimensional datasets and observables.", "topics": [] }, { - "uid": "github/jeffdaily/parasail", - "url": "https://github.com/jeffdaily/parasail", - "rel": "/software/repository/github/jeffdaily/parasail", - "avatar": "https://avatars.githubusercontent.com/u/904248?v=4", - "description": "Pairwise Sequence Alignment Library", + "uid": "github/chadagreene/Tide-Model-Driver", + "url": "https://github.com/chadagreene/Tide-Model-Driver", + "rel": "/software/repository/github/chadagreene/Tide-Model-Driver", + "avatar": "https://avatars.githubusercontent.com/u/15901019?v=4", + "description": "Tide Model Driver for MATLAB, version 3.0", "topics": [] }, { - "uid": "github/MathynVanD/GraFIT", - "url": "https://github.com/MathynVanD/GraFIT", - "rel": "/software/repository/github/MathynVanD/GraFIT", - "avatar": "https://avatars.githubusercontent.com/u/79399617?v=4", - "description": "Toolbox for Frequency Response Function Identification in Gravitational Wave detectors", + "uid": "github/deezer/spleeter", + "url": "https://github.com/deezer/spleeter", + "rel": "/software/repository/github/deezer/spleeter", + "avatar": "https://avatars0.githubusercontent.com/u/4393583?v=4", + "description": "Deezer source separation library including pretrained models.", + "topics": [ + "deezer", + "python", + "tensorflow", + "audio-processing", + "pretrained-models", + "bass", + "drums", + "vocals", + "deep-learning", + "model" + ] + }, + { + "uid": "github/SMI/SmiServices", + "url": "https://github.com/SMI/SmiServices", + "rel": "/software/repository/github/SMI/SmiServices", + "avatar": "https://avatars3.githubusercontent.com/u/56437605?v=4", + "description": "Scale-able loading, linking and anonymisation of DICOM images for healthcare research environments (e.g. Safe Havens)", "topics": [] }, { - "uid": "github/dbosul/CWITools", - "url": "https://github.com/dbosul/cwitools", - "rel": "/software/repository/github/dbosul/CWITools", - "avatar": "https://avatars.githubusercontent.com/u/18314184?v=4", - "description": "Tools for Cosmic Web Imager Data", + "uid": "github/skschum/MFAssignR", + "url": "https://github.com/skschum/MFAssignR", + "rel": "/software/repository/github/skschum/MFAssignR", + "avatar": "https://avatars.githubusercontent.com/u/25142164?v=4", + "description": "The MFAssignR package was designed for multi-element molecular formula (MF) assignment of ultrahigh resolution mass spectrometry measurements. A number of tools for internal mass recalibration, MF assignment, signal-to-noise evaluation, and unambiguous formula selections are provided.", "topics": [] }, { - "uid": "github/zhangjunpeng411/SCOM", - "url": "https://github.com/zhangjunpeng411/SCOM", - "rel": "/software/repository/github/zhangjunpeng411/SCOM", - "avatar": "https://avatars.githubusercontent.com/u/10843899?v=4", - "description": "Pan-cancer characterization of ncRNA synergistic competition", - "topics": [ - "ncrna", - "cerna", - "tumor" - ] + "uid": "github/bregaldo/pywst", + "url": "https://github.com/bregaldo/pywst", + "rel": "/software/repository/github/bregaldo/pywst", + "avatar": "https://avatars.githubusercontent.com/u/30353945?v=4", + "description": "Python package for WST and RWST analyses of astrophysical data.", + "topics": [] }, { - "uid": "github/zhangjunpeng411/Scan", - "url": "https://github.com/zhangjunpeng411/Scan", - "rel": "/software/repository/github/zhangjunpeng411/Scan", - "avatar": "https://avatars.githubusercontent.com/u/10843899?v=4", - "description": "Scanning sample-specific miRNA regulation from bulk and single-cell RNA-sequencing data", - "topics": [ - "gene-regulation", - "mirna", - "mirna-targets", - "single-cell-analysis", - "single-cell-rna-seq" - ] + "uid": "github/johnschwenck/bp", + "url": "https://github.com/johnschwenck/bp", + "rel": "/software/repository/github/johnschwenck/bp", + "avatar": "https://avatars.githubusercontent.com/u/60413604?v=4", + "description": "An R package for analyzing blood pressure data", + "topics": [] }, { - "uid": "github/dglaeser/gridformat", - "url": "https://github.com/dglaeser/gridformat", - "rel": "/software/repository/github/dglaeser/gridformat", - "avatar": "https://avatars.githubusercontent.com/u/49902895?v=4", - "description": "Header-only C++-Library for grid file I/O", - "topics": [ - "computational-grid", - "input-output", - "numerical-modeling", - "simulation" - ] + "uid": "github/Yunzheng168/PANCAKE", + "url": "https://github.com/Yunzheng168/PANCAKE", + "rel": "/software/repository/github/Yunzheng168/PANCAKE", + "avatar": "https://avatars.githubusercontent.com/u/169057934?v=4", + "description": "Python bAsed Numerical Color-magnitude-diagram Analysis pacKagE", + "topics": [] }, { - "uid": "github/AdrianA-T/cytomorph", - "url": "https://github.com/AdrianA-T/cytomorph", - "rel": "/software/repository/github/AdrianA-T/cytomorph", - "avatar": "https://avatars.githubusercontent.com/u/40856467?v=4", - "description": "Cytomorph is a open software based on the main general features of cytoneme-meditated gradient formation. This sfotware allows to upload different experimental data to study in silico the role of different biological parameters of this type of signaling. Cytomorph can also work as an in silico tester for other biological hypotheses that are difficult to validate experimentally. In addition, the software architecture is designed in different modules that make Cytomorph an adaptive computational tool in which new advances can be integrated.", + "uid": "github/freebayes/freebayes", + "url": "https://github.com/freebayes/freebayes", + "rel": "/software/repository/github/freebayes/freebayes", + "avatar": "https://avatars.githubusercontent.com/u/15815823?v=4", + "description": "Bayesian haplotype-based genetic polymorphism discovery and genotyping.", "topics": [] }, { - "uid": "github/soerenslarsen/ISPy3", - "url": "https://github.com/soerenslarsen/ISPy3", - "rel": "/software/repository/github/soerenslarsen/ISPy3", - "avatar": "https://avatars.githubusercontent.com/u/69246792?v=4", - "description": "Tools for Integrated-light Spectroscopy with Python3", + "uid": "github/darioizzo/dcgp", + "url": "https://github.com/darioizzo/dcgp", + "rel": "/software/repository/github/darioizzo/dcgp", + "avatar": "https://avatars3.githubusercontent.com/u/3327087?v=4", + "description": "Implementation of a differentiable CGP (Cartesian Genetic Programming)", "topics": [] }, { - "uid": "github/EOSC-LOFAR/lofar-ld", - "url": "https://github.com/EOSC-LOFAR/lofar-ld", - "rel": "/software/repository/github/EOSC-LOFAR/lofar-ld", - "avatar": "https://avatars3.githubusercontent.com/u/33518451?v=4", - "description": "LOFAR Linked Data Platform", - "topics": [ - "radioastronomy", - "radio-astronomy", - "linked-data" - ] + "uid": "github/ITA-Solar/rh", + "url": "https://github.com/ITA-Solar/rh", + "rel": "/software/repository/github/ITA-Solar/rh", + "avatar": "https://avatars.githubusercontent.com/u/8429185?v=4", + "description": "RH 1.5D", + "topics": [] }, { - "uid": "github/tinglabs/scAIDE", - "url": "https://github.com/tinglabs/scAIDE", - "rel": "/software/repository/github/tinglabs/scAIDE", - "avatar": "https://avatars.githubusercontent.com/u/63091741?v=4", - "description": null, + "uid": "github/hz1010/FIPRESCI_data_analysis", + "url": "https://github.com/hz1010/FIPRESCI_data_analysis", + "rel": "/software/repository/github/hz1010/FIPRESCI_data_analysis", + "avatar": "https://avatars.githubusercontent.com/u/47652056?v=4", + "description": "Code for FIPERSCI data", "topics": [] }, { - "uid": "github/Zstone19/pypetal", - "url": "https://github.com/Zstone19/pypetal", - "rel": "/software/repository/github/Zstone19/pypetal", - "avatar": "https://avatars.githubusercontent.com/u/61068045?v=4", - "description": "A pipeline for estimating AGN time lags", - "topics": [ - "agn", - "astronomy", - "drw", - "gaussian-processes", - "modeling", - "python", - "time-series", - "pipeline" - ] + "uid": "github/Huang-CL/Magrathea", + "url": "https://github.com/Huang-CL/Magrathea", + "rel": "/software/repository/github/Huang-CL/Magrathea", + "avatar": "https://avatars.githubusercontent.com/u/13855548?v=4", + "description": null, + "topics": [] }, { - "uid": "github/wal-yan/target-methylseq-qc", - "url": "https://github.com/wal-yan/target-methylseq-qc", - "rel": "/software/repository/github/wal-yan/target-methylseq-qc", - "avatar": "https://avatars.githubusercontent.com/u/132333411?v=4", - "description": "A lightweight pipeline for collecting Picard metrics from targeted sequence mapping files.", + "uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", + "url": "https://github.com/sintefmath/SurfaceWaterIntegratedModeling.jl", + "rel": "/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", + "avatar": "https://avatars.githubusercontent.com/u/1901550?v=4", + "description": "SWIM - Surface Water Integrated Modeling", "topics": [] }, { - "uid": "github/agerada/AIgarMIC", - "url": "https://github.com/agerada/AIgarMIC", - "rel": "/software/repository/github/agerada/AIgarMIC", - "avatar": "https://avatars.githubusercontent.com/u/62601884?v=4", - "description": "AIgarMIC \u2013\u00a0machine-learning assisted agar dilution software", + "uid": "github/MikkelSchubert/adapterremoval", + "url": "https://github.com/MikkelSchubert/adapterremoval", + "rel": "/software/repository/github/MikkelSchubert/adapterremoval", + "avatar": "https://avatars.githubusercontent.com/u/2411627?v=4", + "description": "AdapterRemoval v2 - rapid adapter trimming, identification, and read merging", "topics": [] }, { - "uid": "github/Vini2/GraphBin", - "url": "https://github.com/metagentools/GraphBin", - "rel": "/software/repository/github/Vini2/GraphBin", - "avatar": "https://avatars.githubusercontent.com/u/105288780?v=4", - "description": "GraphBin: Refined binning of metagenomic contigs using assembly graphs", - "topics": [ - "metagenomics", - "binning", - "contigs", - "assembly-graph", - "label-propagation" - ] + "uid": "github/rmaphoh/AutoMorph", + "url": "https://github.com/rmaphoh/AutoMorph", + "rel": "/software/repository/github/rmaphoh/AutoMorph", + "avatar": "https://avatars.githubusercontent.com/u/68285473?v=4", + "description": "vessel segmentation, artery and vein, optic disc, vascular feature analysis", + "topics": [] }, { - "uid": "github/tkarwal/procoli", - "url": "https://github.com/tkarwal/procoli", - "rel": "/software/repository/github/tkarwal/procoli", - "avatar": "https://avatars.githubusercontent.com/u/33636657?v=4", - "description": "Profiles of cosmological likelihoods: Code for extracting the 1D profile likelihood of a parameter using MontePython ", + "uid": "github/jeaadams/ExoPix", + "url": "https://github.com/jeaadams/ExoPix", + "rel": "/software/repository/github/jeaadams/ExoPix", + "avatar": "https://avatars.githubusercontent.com/u/39896713?v=4", + "description": null, "topics": [] }, { - "uid": "github/xuanxu/starmatrix", - "url": "https://github.com/xuanxu/starmatrix", - "rel": "/software/repository/github/xuanxu/starmatrix", - "avatar": "https://avatars.githubusercontent.com/u/6528?v=4", - "description": "Modelling nucleosynthesis of galactic chemical elements", + "uid": "github/gvilitechltd/LibSWIFFT", + "url": "https://github.com/gvilitechltd/LibSWIFFT", + "rel": "/software/repository/github/gvilitechltd/LibSWIFFT", + "avatar": "https://avatars.githubusercontent.com/u/72996922?v=4", + "description": "LibSWIFFT - A fast C/C++ library for the SWIFFT secure homomorphic hash function", "topics": [ - "astrophysics", - "galaxies" + "cryptography", + "lattice-based-crypto", + "secure-hashing", + "hash-functions", + "homomorphic", + "c", + "cpp", + "cpp11", + "c-plus-plus", + "c-plus-plus-11", + "swifft" ] }, { - "uid": "github/swiftsim/swiftsimio", - "url": "https://github.com/SWIFTSIM/swiftsimio", - "rel": "/software/repository/github/swiftsim/swiftsimio", - "avatar": "https://avatars1.githubusercontent.com/u/37541309?v=4", - "description": "Python library for reading SWIFT data. Uses unyt and h5py.", + "uid": "github/kerkelae/disimpy", + "url": "https://github.com/kerkelae/disimpy", + "rel": "/software/repository/github/kerkelae/disimpy", + "avatar": "https://avatars3.githubusercontent.com/u/15076450?v=4", + "description": "Massively parallelized Monte Carlo diffusion MRI simulator written in Python.", "topics": [ - "cosmology", - "particle", - "hdf5" + "diffusion-mri", + "diffusion-mri-simulation", + "monte-carlo-simulation", + "gpu-computing", + "cuda" ] }, { - "uid": "github/GATB/bcalm", - "url": "https://github.com/GATB/bcalm", - "rel": "/software/repository/github/GATB/bcalm", - "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", - "description": "compacted de Bruijn graph construction in low memory", - "topics": [ - "bioinformatics", - "debruijn", - "unitigs", - "graph" - ] + "uid": "github/JEFworks-Lab/STdeconvolve", + "url": "https://github.com/JEFworks-Lab/STdeconvolve", + "rel": "/software/repository/github/JEFworks-Lab/STdeconvolve", + "avatar": "https://avatars.githubusercontent.com/u/68028140?v=4", + "description": "Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data", + "topics": [] }, { - "uid": "github/GATB/gatb-core", - "url": "https://github.com/GATB/gatb-core", - "rel": "/software/repository/github/GATB/gatb-core", - "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", - "description": "Core library of the Genome Analysis Toolbox with de-Bruijn graph", - "topics": [ - "bioinformatics", - "de-bruijn-graphs", - "genomics", - "gatb" - ] + "uid": "github/alexander-pastukhov/bistablehistory", + "url": "https://github.com/alexander-pastukhov/bistablehistory", + "rel": "/software/repository/github/alexander-pastukhov/bistablehistory", + "avatar": "https://avatars.githubusercontent.com/u/12910993?v=4", + "description": "A package to compute a cumulative history for time-series of perceptual dominance in bistable displays.", + "topics": [] }, { - "uid": "github/GATB/MindTheGap", - "url": "https://github.com/GATB/MindTheGap", - "rel": "/software/repository/github/GATB/MindTheGap", - "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", - "description": "MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.", - "topics": [ - "bioinformatics", - "genomics", - "gatb", - "debruijn-graph", - "structural-variants" - ] + "uid": "github/libgamera/GAMERA", + "url": "https://github.com/libgamera/GAMERA", + "rel": "/software/repository/github/libgamera/GAMERA", + "avatar": "https://avatars.githubusercontent.com/u/48202577?v=4", + "description": "A C++/python library for source modeling in gamma astronomy", + "topics": [] }, { - "uid": "github/GATB/simka", - "url": "https://github.com/GATB/simka", - "rel": "/software/repository/github/GATB/simka", - "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", - "description": "Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.", + "uid": "github/tvwenger/bayes_spec", + "url": "https://github.com/tvwenger/bayes_spec", + "rel": "/software/repository/github/tvwenger/bayes_spec", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "A Bayesian Spectral Line Modeling Framework", "topics": [] }, { - "uid": "github/mathjax/MathJax", - "url": "https://github.com/mathjax/MathJax", - "rel": "/software/repository/github/mathjax/MathJax", - "avatar": "https://avatars1.githubusercontent.com/u/252187?v=4", - "description": "Beautiful math in all browsers", - "topics": [ - "javascript", - "mathematics", - "latex", - "asciimath-notation", - "mathml", - "mathjax", - "typography", - "svg", - "html", - "css", - "accessibility" - ] + "uid": "github/tvwenger/millennium-tap-query", + "url": "https://github.com/tvwenger/millennium-tap-query", + "rel": "/software/repository/github/tvwenger/millennium-tap-query", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "A Python Tool to Query the Millennium Simulation UWS/TAP client", + "topics": [] }, { - "uid": "github/oneilsh/tidytensor", - "url": "https://github.com/oneilsh/tidytensor", - "rel": "/software/repository/github/oneilsh/tidytensor", - "avatar": "https://avatars.githubusercontent.com/u/77859?v=4", - "description": "Utilities for multidimensional arrays as named hierarchical structures", + "uid": "github/tvwenger/tmbidl", + "url": "https://github.com/tvwenger/tmbidl", + "rel": "/software/repository/github/tvwenger/tmbidl", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "TMBIDL - Single Dish Radio Astronomy Data Reduction Package", "topics": [] }, { - "uid": "github/PyTables/PyTables", - "url": "https://github.com/PyTables/PyTables", - "rel": "/software/repository/github/PyTables/PyTables", - "avatar": "https://avatars1.githubusercontent.com/u/828302?v=4", - "description": "A Python package to manage extremely large amounts of data", + "uid": "github/tvwenger/HII-Region-Models", + "url": "https://github.com/tvwenger/HII-Region-Models", + "rel": "/software/repository/github/tvwenger/HII-Region-Models", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": null, "topics": [] }, { - "uid": "github/optimusmoose/jsms", - "url": "https://github.com/optimusmoose/jsms", - "rel": "/software/repository/github/optimusmoose/jsms", - "avatar": "https://avatars2.githubusercontent.com/u/1541778?v=4", - "description": "A modular JavaScript viewer for mass spectrometry data", + "uid": "github/tvwenger/wisp", + "url": "https://github.com/tvwenger/WISP", + "rel": "/software/repository/github/tvwenger/wisp", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "WISP: Wenger Interferometry Software Package", "topics": [] }, { - "uid": "github/Griffan/VerifyBamID", - "url": "https://github.com/Griffan/VerifyBamID", - "rel": "/software/repository/github/Griffan/VerifyBamID", - "avatar": "https://avatars.githubusercontent.com/u/2037838?v=4", - "description": "VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.", - "topics": [ - "genetics", - "dna-sequences", - "qc-analysis", - "contamination", - "bioinformatics", - "biostatistics", - "bam", - "cram" - ] + "uid": "github/tvwenger/kinematic_scaleheight", + "url": "https://github.com/tvwenger/kinematic_scaleheight", + "rel": "/software/repository/github/tvwenger/kinematic_scaleheight", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "Use MCMC methods to kinematically estimate the vertical distribution of clouds in the Galactic plane", + "topics": [] }, { - "uid": "github/Rocsg/FijiRelax", - "url": "https://github.com/Rocsg/FijiRelax", - "rel": "/software/repository/github/Rocsg/FijiRelax", - "avatar": "https://avatars.githubusercontent.com/u/24812704?v=4", - "description": "FijiRelax: 3D+t multi-echo spin-echo sequences MRI analysis", - "topics": [ - "image-processing", - "imagej", - "imagej-plugins", - "java", - "modeling", - "mri", - "relaxation-time" - ] + "uid": "github/tvwenger/kd", + "url": "https://github.com/tvwenger/kd", + "rel": "/software/repository/github/tvwenger/kd", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "Utilities to calculate kinematic distances", + "topics": [] }, { - "uid": "github/NeamulKabir/EnsembleFam", - "url": "https://github.com/NeamulKabir/EnsembleFam", - "rel": "/software/repository/github/NeamulKabir/EnsembleFam", - "avatar": "https://avatars.githubusercontent.com/u/9514340?v=4", - "description": "EnsembleFam: Towards a more accurate protein function prediction in twilight zone", + "uid": "github/tvwenger/hii-region-kinematics", + "url": "https://github.com/tvwenger/hii-region-kinematics", + "rel": "/software/repository/github/tvwenger/hii-region-kinematics", + "avatar": "https://avatars.githubusercontent.com/u/5921304?v=4", + "description": "Radio recombination line observations of simulated HII regions with various internal kinematic structure", "topics": [] }, { - "uid": "github/annehutter/polyspectrum", - "url": "https://github.com/annehutter/polyspectrum", - "rel": "/software/repository/github/annehutter/polyspectrum", - "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", - "description": "MPI-parallelised code to compute polyspectrum (including bispectrum) from a 3D grid", - "topics": [ - "polyspectrum", - "powerspectrum", - "bispectrum", - "mpi" - ] + "uid": "github/jkrogager/VoigtFit", + "url": "https://github.com/jkrogager/VoigtFit", + "rel": "/software/repository/github/jkrogager/VoigtFit", + "avatar": "https://avatars.githubusercontent.com/u/23232265?v=4", + "description": "Python code to fit absorption lines semi-interactively", + "topics": [] }, { - "uid": "github/annehutter/grid-model", - "url": "https://github.com/annehutter/grid-model", - "rel": "/software/repository/github/annehutter/grid-model", - "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", - "description": "Code to compute ionization field from density fields and source catalogue (CIFOG)", + "uid": "github/WilsonGregory/ginjax", + "url": "https://github.com/WilsonGregory/ginjax", + "rel": "/software/repository/github/WilsonGregory/ginjax", + "avatar": "https://avatars.githubusercontent.com/u/8941742?v=4", + "description": "Equivariant convolutions for machine learning on tensor fields", + "topics": [] + }, + { + "uid": "github/oliveirara/polyMV", + "url": "https://github.com/oliveirara/polyMV", + "rel": "/software/repository/github/oliveirara/polyMV", + "avatar": "https://avatars.githubusercontent.com/u/12023276?v=4", + "description": "Python package that converts multipolar coefficients into Multipole Vectors and Fr\u00e9chet Vectors", "topics": [ - "reionization", - "redshift", - "ionization-source", - "fftw", - "mpi", - "photoionization", - "cosmological", - "astrophysics" + "cosmology", + "multipole-vectors", + "frechet-vectors" ] }, { - "uid": "github/annehutter/astraeus", - "url": "https://github.com/annehutter/astraeus", - "rel": "/software/repository/github/annehutter/astraeus", - "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", - "description": "Home of the semi-analytical / semi-numerical galaxy evolution and reionization code ASTRAEUS", - "topics": [ - "galaxy-evolution", - "reionization", - "mpi", - "modelling", - "semi-numerical", - "astronomy", - "astrophysics", - "astrophysical-simulation" - ] + "uid": "github/BMCV/giatools", + "url": "https://github.com/BMCV/giatools", + "rel": "/software/repository/github/BMCV/giatools", + "avatar": "https://avatars.githubusercontent.com/u/24603562?v=4", + "description": "Tools required for Galaxy Image Analysis", + "topics": [] }, { - "uid": "github/s-will/LocARNA", - "url": "https://github.com/s-will/LocARNA", - "rel": "/software/repository/github/s-will/LocARNA", - "avatar": "https://avatars.githubusercontent.com/u/11848365?v=4", - "description": "Alignment of RNAs", + "uid": "github/BMCV/galaxy-image-analysis", + "url": "https://github.com/BMCV/galaxy-image-analysis", + "rel": "/software/repository/github/BMCV/galaxy-image-analysis", + "avatar": "https://avatars.githubusercontent.com/u/24603562?v=4", + "description": "Galaxy tools for image analysis", "topics": [ - "alignment", - "rna-structure-prediction", - "rna-structural-analysis" + "usegalaxy", + "usegalaxy-eu" ] }, { - "uid": "github/seclark/RHT", - "url": "https://github.com/seclark/RHT", - "rel": "/software/repository/github/seclark/RHT", - "avatar": "https://avatars.githubusercontent.com/u/3051331?v=4", - "description": "The Rolling Hough Transform", + "uid": "github/filipezabala/voice", + "url": "https://github.com/filipezabala/voice", + "rel": "/software/repository/github/filipezabala/voice", + "avatar": "https://avatars.githubusercontent.com/u/35049061?v=4", + "description": "General tools for voice analysis.", "topics": [] }, { - "uid": "github/tdaylan/pcat", - "url": "https://github.com/tdaylan/pcat", - "rel": "/software/repository/github/tdaylan/pcat", - "avatar": "https://avatars.githubusercontent.com/u/10747142?v=4", - "description": "A transdimensional, hierarchical, Bayesian framework to sample from a metamodel", + "uid": "github/SandyYuan/GRAND-HOD", + "url": "https://github.com/SandyYuan/GRAND-HOD", + "rel": "/software/repository/github/SandyYuan/GRAND-HOD", + "avatar": "https://avatars.githubusercontent.com/u/12791861?v=4", + "description": "A decorated HOD code in Python that is differentiable and incorporates various generalizations to the standard HOD.", "topics": [] }, { - "uid": "github/heatherprince/cosmoped", - "url": "https://github.com/heatherprince/cosmoped", - "rel": "/software/repository/github/heatherprince/cosmoped", - "avatar": "https://avatars.githubusercontent.com/u/15628365?v=4", - "description": "Compressed CMB likelihood code that uses the MOPED (Multiple/Massively Optimised Parameter Estimation and Data compression) compression scheme to compress the Planck power spectrum", + "uid": "github/SandyYuan/s3PCF", + "url": "https://github.com/SandyYuan/s3PCF", + "rel": "/software/repository/github/SandyYuan/s3PCF", + "avatar": "https://avatars.githubusercontent.com/u/12791861?v=4", + "description": "squeezed 3PCF package", "topics": [] }, { - "uid": "github/TheJacksonLaboratory/SvAnn", - "url": "https://github.com/TheJacksonLaboratory/SvAnna", - "rel": "/software/repository/github/TheJacksonLaboratory/SvAnn", - "avatar": "https://avatars.githubusercontent.com/u/19977120?v=4", - "description": "Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing", - "topics": [ - "genomics", - "long-read-sequencing", - "prioritization", - "bioinformatics", - "rare-disease" - ] + "uid": "github/4DModeller/fdmr", + "url": "https://github.com/4DModeller/fdmr", + "rel": "/software/repository/github/4DModeller/fdmr", + "avatar": "https://avatars.githubusercontent.com/u/123073836?v=4", + "description": "4DModeller, Bayesian Spatio-temporal modeling in R", + "topics": [] }, { - "uid": "github/TheJacksonLaboratory/drug-synergy", - "url": "https://github.com/TheJacksonLaboratory/drug-synergy", - "rel": "/software/repository/github/TheJacksonLaboratory/drug-synergy", - "avatar": "https://avatars.githubusercontent.com/u/19977120?v=4", - "description": "Drug synergy prediction tool", + "uid": "github/dblaschke-LANL/PyDislocDyn", + "url": "https://github.com/dblaschke-LANL/PyDislocDyn", + "rel": "/software/repository/github/dblaschke-LANL/PyDislocDyn", + "avatar": "https://avatars.githubusercontent.com/u/40176390?v=4", + "description": null, "topics": [] }, { - "uid": "github/jbrakensiek/CORBITS", - "url": "https://github.com/jbrakensiek/CORBITS", - "rel": "/software/repository/github/jbrakensiek/CORBITS", - "avatar": "https://avatars.githubusercontent.com/u/3803974?v=4", + "uid": "github/el2718/FastQSL", + "url": "https://github.com/el2718/FastQSL", + "rel": "/software/repository/github/el2718/FastQSL", + "avatar": "https://avatars.githubusercontent.com/u/45861675?v=4", "description": null, "topics": [] }, { - "uid": "github/JuliaHealth/NeuroAnalyzer.jl", - "url": "https://github.com/JuliaHealth/NeuroAnalyzer.jl", - "rel": "/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", - "avatar": "https://avatars.githubusercontent.com/u/64336345?v=4", - "description": "Julia toolbox for analyzing neurophysiological data", - "topics": [ - "ecog", - "eeg", - "ieeg", - "meg", - "neuroscience", - "nirs", - "psychology", - "seeg", - "tdcs", - "brain", - "julia", - "tacs", - "tms", - "trns" - ] + "uid": "github/fccoelho/epigrass", + "url": "https://github.com/fccoelho/epigrass", + "rel": "/software/repository/github/fccoelho/epigrass", + "avatar": "https://avatars.githubusercontent.com/u/140123?v=4", + "description": "Epidemiological Geo-referenced Analysis and Simulation system", + "topics": [] }, { - "uid": "github/vprusso/toqito", - "url": "https://github.com/vprusso/toqito", - "rel": "/software/repository/github/vprusso/toqito", - "avatar": "https://avatars.githubusercontent.com/u/1562214?v=4", - "description": "|toqito> (Theory of Quantum Information Toolkit) in Python :snake:", - "topics": [ - "quantum-computing", - "python", - "quantum-information", - "matrix-analysis", - "python-3", - "unitaryhack", - "physics", - "quantum" - ] + "uid": "github/fccoelho/epimodels", + "url": "https://github.com/fccoelho/epimodels", + "rel": "/software/repository/github/fccoelho/epimodels", + "avatar": "https://avatars.githubusercontent.com/u/140123?v=4", + "description": "Library for simulation with mathematical epidemiology models", + "topics": [] }, { - "uid": "github/savila/halogen", - "url": "https://github.com/savila/HALOGEN", - "rel": "/software/repository/github/savila/halogen", - "avatar": "https://avatars.githubusercontent.com/u/6678454?v=4", - "description": null, + "uid": "github/SpectraCollab/ORMIR_XCT", + "url": "https://github.com/SpectraCollab/ORMIR_XCT", + "rel": "/software/repository/github/SpectraCollab/ORMIR_XCT", + "avatar": "https://avatars.githubusercontent.com/u/107300107?v=4", + "description": "Code developed at the 2022 ORMIR workshop in Maastricht, Netherlands", "topics": [] }, { - "uid": "github/iric-soft/km", - "url": "https://github.com/iric-soft/km", - "rel": "/software/repository/github/iric-soft/km", - "avatar": "https://avatars.githubusercontent.com/u/26148135?v=4", - "description": "km : a software for RNA-seq investigation using k-mer decomposition", + "uid": "github/CalumHawcroft/Starburst", + "url": "https://github.com/CalumHawcroft/Starburst", + "rel": "/software/repository/github/CalumHawcroft/Starburst", + "avatar": "https://avatars.githubusercontent.com/u/180121613?v=4", + "description": null, "topics": [] }, { - "uid": "github/tanner-trickle/EXCEED-DM", - "url": "https://github.com/tanner-trickle/EXCEED-DM", - "rel": "/software/repository/github/tanner-trickle/EXCEED-DM", - "avatar": "https://avatars.githubusercontent.com/u/46977645?v=4", - "description": "EXCEED-DM: EXtended Calculation of Electronic Excitations for Direct detection of Dark Matter", - "topics": [ - "physics", - "particle-physics", - "materials-science", - "condensed-matter-physics" - ] + "uid": "github/vle-prtc/rbef-prtc", + "url": "https://github.com/vle-prtc/rbef-prtc", + "rel": "/software/repository/github/vle-prtc/rbef-prtc", + "avatar": "https://avatars.githubusercontent.com/u/245275286?v=4", + "description": "Material computacional utilizado na realiza\u00e7\u00e3o de superf\u00edcies e trajet\u00f3rias no problema restrito de tr\u00eas corpos. Foram utilizados o Wolfram Mathematica 13.3 e o Mathworks MATLAB R2023b.", + "topics": [] }, { - "uid": "github/eltevo/steps", - "url": "https://github.com/eltevo/StePS", - "rel": "/software/repository/github/eltevo/steps", - "avatar": "https://avatars.githubusercontent.com/u/12859392?v=4", - "description": "Stereographically Projected Cosmological Simulations", + "uid": "github/PaulMcMillan-Astro/Torus", + "url": "https://github.com/PaulMcMillan-Astro/Torus", + "rel": "/software/repository/github/PaulMcMillan-Astro/Torus", + "avatar": "https://avatars.githubusercontent.com/u/5293931?v=4", + "description": "Torus Code", "topics": [] }, { - "uid": "github/clemson-cal/sailfish", - "url": "https://github.com/clemson-cal/sailfish", - "rel": "/software/repository/github/clemson-cal/sailfish", - "avatar": "https://avatars.githubusercontent.com/u/70648863?v=4", - "description": "GPU-accelerated astrophysics gas dynamics code", + "uid": "github/PaulMcMillan-Astro/GalPot", + "url": "https://github.com/PaulMcMillan-Astro/GalPot", + "rel": "/software/repository/github/PaulMcMillan-Astro/GalPot", + "avatar": "https://avatars.githubusercontent.com/u/5293931?v=4", + "description": "A stand-alone version of Dehnen's GalaxyPotential code.", "topics": [] }, { - "uid": "github/tekpinar/correlationplus", - "url": "https://github.com/tekpinar/correlationplus", - "rel": "/software/repository/github/tekpinar/correlationplus", - "avatar": "https://avatars1.githubusercontent.com/u/13648079?v=4", - "description": "A Python package to calculate, visualize and analyze dynamical correlations of proteins.", - "topics": [ - "bioinformatics", - "proteins", - "dynamics", - "correlations", - "visualization", - "analysis", - "graph", - "network", - "centrality", - "diffmap" - ] + "uid": "github/indraniel/fqgrep", + "url": "https://github.com/indraniel/fqgrep", + "rel": "/software/repository/github/indraniel/fqgrep", + "avatar": "https://avatars.githubusercontent.com/u/42710?v=4", + "description": "An approximate sequence pattern matcher for FASTQ/FASTA files.", + "topics": [] }, { - "uid": "github/mfruzan/HaploMaker", - "url": "https://github.com/mfruzan/HaploMaker", - "rel": "/software/repository/github/mfruzan/HaploMaker", - "avatar": "https://avatars.githubusercontent.com/u/48665672?v=4", - "description": null, + "uid": "github/morpheus-project/morpheus", + "url": "https://github.com/morpheus-project/morpheus", + "rel": "/software/repository/github/morpheus-project/morpheus", + "avatar": "https://avatars.githubusercontent.com/u/46008492?v=4", + "description": "A Library For Generating Morphological Semantic Segmentation Maps of Astronomical Images", "topics": [] }, { - "uid": "github/codidact/qpixel", - "url": "https://github.com/codidact/qpixel", - "rel": "/software/repository/github/codidact/qpixel", - "avatar": "https://avatars2.githubusercontent.com/u/57011216?v=4", - "description": "Q&A-based community knowledge-sharing software", - "topics": [] + "uid": "github/johnveitch/cpnest", + "url": "https://github.com/johnveitch/cpnest", + "rel": "/software/repository/github/johnveitch/cpnest", + "avatar": "https://avatars.githubusercontent.com/u/3687399?v=4", + "description": "Parallel nested sampling", + "topics": [ + "bayesian-inference", + "python", + "nested-sampling" + ] }, { - "uid": "github/bempp/bempp-cl", - "url": "https://github.com/bempp/bempp-cl", - "rel": "/software/repository/github/bempp/bempp-cl", - "avatar": "https://avatars.githubusercontent.com/u/693670?v=4", - "description": "A fast Python based just-in-time compiling boundary element library", + "uid": "github/davi-rodrigues/CCBH-Numerics", + "url": "https://github.com/davi-rodrigues/CCBH-Numerics", + "rel": "/software/repository/github/davi-rodrigues/CCBH-Numerics", + "avatar": "https://avatars.githubusercontent.com/u/39133660?v=4", + "description": "Using gravitational wave data, CCBH-Numerics computes the probability of the existence of a single cosmologically coupled black hole with a formation mass below a specified threshold. This tool was developed alongside the paper by Amendola, Rodrigues, Kumar, and Quartin, published in MNRAS in 2024", "topics": [] }, { - "uid": "github/bempp/kifmm", - "url": "https://github.com/bempp/kifmm", - "rel": "/software/repository/github/bempp/kifmm", - "avatar": "https://avatars.githubusercontent.com/u/693670?v=4", - "description": "Fast Multipole Methods in Rust", + "uid": "github/davi-rodrigues/NAVanalysis", + "url": "https://github.com/davi-rodrigues/NAVanalysis", + "rel": "/software/repository/github/davi-rodrigues/NAVanalysis", + "avatar": "https://avatars.githubusercontent.com/u/39133660?v=4", + "description": "Normalized Additional Velocity analysis", "topics": [] }, { - "uid": "github/montilab/nf-gwas-pipeline", - "url": "https://github.com/montilab/nf-gwas-pipeline", - "rel": "/software/repository/github/montilab/nf-gwas-pipeline", - "avatar": "https://avatars.githubusercontent.com/u/52213315?v=4", - "description": "A Nextflow Genome-Wide Association Study (GWAS) Pipeline", + "uid": "github/argiopetech/base", + "url": "https://github.com/argiopetech/base", + "rel": "/software/repository/github/argiopetech/base", + "avatar": "https://avatars.githubusercontent.com/u/395366?v=4", + "description": "Bayesian Analysis for Stellar Evolution", "topics": [ - "nextflow", - "bioinformatics-pipeline" + "bayesian-analysis", + "mcmc", + "astronomy", + "bayesian-statistics", + "c-plus-plus" ] }, { - "uid": "github/GRIT-RBSim/GRIT", - "url": "https://github.com/GRIT-RBSim/GRIT", - "rel": "/software/repository/github/GRIT-RBSim/GRIT", - "avatar": "https://avatars.githubusercontent.com/u/82004002?v=4", - "description": "Gravitational Rigid-body InTegrators, for simulating the coupled dynamics of both spin and orbit.", + "uid": "github/TeamNCMC/cuisto", + "url": "https://github.com/TeamNCMC/cuisto", + "rel": "/software/repository/github/TeamNCMC/cuisto", + "avatar": "https://avatars.githubusercontent.com/u/186301548?v=4", + "description": "Quantify histological data", "topics": [] }, { - "uid": "github/grd349/PBjam", - "url": "https://github.com/grd349/PBjam", - "rel": "/software/repository/github/grd349/PBjam", - "avatar": "https://avatars.githubusercontent.com/u/14784265?v=4", - "description": "A repo for our peak baggin code and tips on jam", + "uid": "github/csalyk/spectools_ir", + "url": "https://github.com/csalyk/spectools_ir", + "rel": "/software/repository/github/csalyk/spectools_ir", + "avatar": "https://avatars.githubusercontent.com/u/7980397?v=4", + "description": null, "topics": [] }, { - "uid": "github/bayzidlab/SAINT-Angle", - "url": "https://github.com/bayzidlab/SAINT-Angle", - "rel": "/software/repository/github/bayzidlab/SAINT-Angle", - "avatar": "https://avatars.githubusercontent.com/u/113564719?v=4", - "description": "This repository contains the official implementation of our paper titled SAINT-Angle: self-attention augmented inception-inside-inception network and transfer learning improve protein backbone torsion angles prediction.", + "uid": "github/hendr1km/dropout", + "url": "https://github.com/hendr1km/dropout", + "rel": "/software/repository/github/hendr1km/dropout", + "avatar": "https://avatars.githubusercontent.com/u/124534996?v=4", + "description": "tools for dropout analysis when working with survey data", "topics": [] }, { - "uid": "github/DSIMB/medusa", - "url": "https://github.com/DSIMB/MEDUSA", - "rel": "/software/repository/github/DSIMB/medusa", - "avatar": "https://avatars.githubusercontent.com/u/76147763?v=4", - "description": "A Deep Learning based protein flexibility prediction tool.", - "topics": [ - "protein", - "flexibility", - "protein-sequence", - "prediction", - "deep-learning" - ] + "uid": "github/LalResearchGroup/CNV-clinviewer", + "url": "https://github.com/LalResearchGroup/CNV-clinviewer", + "rel": "/software/repository/github/LalResearchGroup/CNV-clinviewer", + "avatar": "https://avatars.githubusercontent.com/u/98547504?v=4", + "description": null, + "topics": [] }, { - "uid": "github/atakan/KeplerSolver", - "url": "https://github.com/atakan/KeplerSolver", - "rel": "/software/repository/github/atakan/KeplerSolver", - "avatar": "https://avatars.githubusercontent.com/u/655507?v=4", - "description": "A code for solving Kepler's equation, with arbitrary epoch.", + "uid": "github/mary77/scQcut", + "url": "https://github.com/mary77/scQcut", + "rel": "/software/repository/github/mary77/scQcut", + "avatar": "https://avatars.githubusercontent.com/u/12682250?v=4", + "description": "A completely parameter-free method for graph-based single cell RNA-seq clustering", "topics": [] }, { - "uid": "github/ACCarnall/SpectRes", - "url": "https://github.com/ACCarnall/SpectRes", - "rel": "/software/repository/github/ACCarnall/SpectRes", - "avatar": "https://avatars.githubusercontent.com/u/15688485?v=4", - "description": "SpectRes is a Python module which efficiently resamples spectra and their associated uncertainties onto an arbitrary wavelength grid. Read the documentation at", - "topics": [] + "uid": "github/michalc/OpenTTDLab", + "url": "https://github.com/michalc/OpenTTDLab", + "rel": "/software/repository/github/michalc/OpenTTDLab", + "avatar": "https://avatars.githubusercontent.com/u/13877?v=4", + "description": "A Python framework for running reproducible experiments using OpenTTD", + "topics": [ + "openttd" + ] }, { - "uid": "github/ACCarnall/bagpipes", - "url": "https://github.com/ACCarnall/bagpipes", - "rel": "/software/repository/github/ACCarnall/bagpipes", - "avatar": "https://avatars.githubusercontent.com/u/15688485?v=4", - "description": "Bagpipes is a state of the art code for generating realistic model galaxy spectra and fitting these to spectroscopic and photometric observations. Users should install with pip, not by cloning the repository.", + "uid": "github/SihaoCheng/WD_models", + "url": "https://github.com/SihaoCheng/WD_models", + "rel": "/software/repository/github/SihaoCheng/WD_models", + "avatar": "https://avatars.githubusercontent.com/u/35247024?v=4", + "description": "I provide a python package for transformations between WD photometry (Gaia, SDSS, WISE, and many more) and physical parameters, based on interpolation of existing atmosphere grid and cooling models. If you use this tool, please cite this website and the corresponding papers of atmosphere grid (synthetic colors) and cooling models. ", "topics": [] }, { - "uid": "github/uwssg/APS", - "url": "https://github.com/uwssg/APS", - "rel": "/software/repository/github/uwssg/APS", - "avatar": "https://avatars.githubusercontent.com/u/1728180?v=4", - "description": "an alternative to Markov chain Monte Carlo", + "uid": "github/jaimedelacruz/stic", + "url": "https://github.com/jaimedelacruz/stic", + "rel": "/software/repository/github/jaimedelacruz/stic", + "avatar": "https://avatars.githubusercontent.com/u/6310224?v=4", + "description": "The Stockholm inversion code", "topics": [] }, { - "uid": "github/IndrajeetPatil/statsExpressions", - "url": "https://github.com/IndrajeetPatil/statsExpressions", - "rel": "/software/repository/github/IndrajeetPatil/statsExpressions", - "avatar": "https://avatars.githubusercontent.com/u/11330453?v=4", - "description": "Expressions and dataframes with statistical details \ud83d\udcc9 \ud83d\udcdc\ud83d\udd23\u2705", + "uid": "github/ethankruse/koi3278", + "url": "https://github.com/ethankruse/koi3278", + "rel": "/software/repository/github/ethankruse/koi3278", + "avatar": "https://avatars.githubusercontent.com/u/6944089?v=4", + "description": "Analysis files for the KOI-3278 system", "topics": [ - "statistical-tests", - "statistical-details", - "meta-analysis", - "contingency-table", - "robust", - "correlation", - "parametric", - "bayesian-inference", - "bayesian-statistics", - "robust-statistics", - "effectsize", - "tidy" + "astronomy", + "science" ] }, { - "uid": "github/IndrajeetPatil/ggstatsplot", - "url": "https://github.com/IndrajeetPatil/ggstatsplot", - "rel": "/software/repository/github/IndrajeetPatil/ggstatsplot", - "avatar": "https://avatars.githubusercontent.com/u/11330453?v=4", - "description": "Enhancing `ggplot2` plots with statistical analysis \ud83d\udcca\ud83c\udfa8\ud83d\udce3", + "uid": "github/ec-jrc/nrt", + "url": "https://github.com/ec-jrc/nrt", + "rel": "/software/repository/github/ec-jrc/nrt", + "avatar": "https://avatars.githubusercontent.com/u/39263635?v=4", + "description": "Near Real Time monitoring of satellite image time-series", "topics": [ - "ggplot-extension", - "statistical-tests", - "dataviz", - "r", - "statistical-analysis", - "visualization", - "datascience", - "violin-plot", - "plot", - "bayes-factors", - "regression-models", - "correlation", - "correlation-matrices", - "tidy-data", - "effect-size", - "mixed-models", - "robust-statistics", - "non-parametric-statistics", - "parametric", - "meta-analysis" + "anomalies-detection", + "sentinel-2", + "monitoring", + "datacube", + "forest-disturbances" ] }, { - "uid": "github/chenzhaiyu/abspy", - "url": "https://github.com/chenzhaiyu/abspy", - "rel": "/software/repository/github/chenzhaiyu/abspy", - "avatar": "https://avatars.githubusercontent.com/u/24312770?v=4", - "description": "3D adaptive binary space partitioning and beyond", + "uid": "github/grburgess/polarpy", + "url": "https://github.com/grburgess/polarpy", + "rel": "/software/repository/github/grburgess/polarpy", + "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", + "description": "Tools for polar", "topics": [ - "point-cloud", - "3d", - "adaptive", - "binary-space-partition", - "reconstruction", - "python" + "polarization", + "polarization-data", + "grb", + "data-analysis", + "3ml" ] }, { - "uid": "github/genotoul-bioinfo/Binette", - "url": "https://github.com/genotoul-bioinfo/Binette", - "rel": "/software/repository/github/genotoul-bioinfo/Binette", - "avatar": "https://avatars.githubusercontent.com/u/36693932?v=4", - "description": "A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.", + "uid": "github/grburgess/popsynth", + "url": "https://github.com/grburgess/popsynth", + "rel": "/software/repository/github/grburgess/popsynth", + "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", + "description": "A generic flux/parameter population synthesis code", "topics": [ - "bioinformatics-tool", - "metagenomics-binning", - "metagenomics", - "microbiology" + "population", + "simulation", + "statistics", + "population-synthesis", + "astrophysics", + "astronomy" ] }, { - "uid": "github/genotoul-bioinfo/dgenies", - "url": "https://github.com/genotoul-bioinfo/dgenies", - "rel": "/software/repository/github/genotoul-bioinfo/dgenies", - "avatar": "https://avatars1.githubusercontent.com/u/36693932?v=4", - "description": "Dotplot large Genomes in an Interactive, Efficient and Simple way", + "uid": "github/grburgess/pynchrotron", + "url": "https://github.com/grburgess/pynchrotron", + "rel": "/software/repository/github/grburgess/pynchrotron", + "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", + "description": "Implements synchrotron emission from cooling electrons", "topics": [ - "inra", - "genotoul", - "bioinformatics", - "dotplot", - "genome", - "comparision" + "gamma-ray-astronomy", + "synchrotron", + "chang-cooper", + "electrons", + "grb", + "numerics", + "threeml", + "astromodels" ] }, { - "uid": "github/gwpy/gwpy", - "url": "https://github.com/gwpy/gwpy", - "rel": "/software/repository/github/gwpy/gwpy", - "avatar": "https://avatars.githubusercontent.com/u/5383739?v=4", - "description": "Package for analysing and characterising gravitational wave data in python", + "uid": "github/grburgess/nazgul", + "url": "https://github.com/grburgess/nazgul", + "rel": "/software/repository/github/grburgess/nazgul", + "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", + "description": "GRB triangulation via non-stationary time-series models", + "topics": [ + "grb", + "localization", + "random-fourier-features", + "non-parametric-inference", + "time-series-analysis", + "stan", + "fermi" + ] + }, + { + "uid": "github/grburgess/ronswanson", + "url": "https://github.com/grburgess/ronswanson", + "rel": "/software/repository/github/grburgess/ronswanson", + "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", + "description": "Ron Swanson builds tables for 3ML", "topics": [ + "3ml", + "astromodels", + "data-analysis", + "interpolation", "python", - "gravitational-waves", - "gwpy", - "gpl" + "ron-swanson", + "spectral-fitting" ] }, { - "uid": "github/ManuelBehrendt/Mera.jl", - "url": "https://github.com/ManuelBehrendt/Mera.jl", - "rel": "/software/repository/github/ManuelBehrendt/Mera.jl", - "avatar": "https://avatars.githubusercontent.com/u/29633996?v=4", - "description": " Analysis Tool for Astrophysical Simulation Data in the Julia Language", + "uid": "github/RajLabMSSM/echolocatoR", + "url": "https://github.com/RajLabMSSM/echolocatoR", + "rel": "/software/repository/github/RajLabMSSM/echolocatoR", + "avatar": "https://avatars.githubusercontent.com/u/43655912?v=4", + "description": "Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.", "topics": [ - "astrophysics", - "hydrodynamics", - "fluid-dynamics", - "postprocessing", - "julia", - "ramses", - "adaptive-mesh-refinement", - "n-body", - "grid", - "julialang" + "bioinformatics", + "finemap", + "colocalization", + "linkage-disequilibrium", + "gwas", + "qtl", + "variant-annotation", + "echoverse" ] }, { - "uid": "github/RamanLab/iCOMIC", - "url": "https://github.com/RamanLab/iCOMIC", - "rel": "/software/repository/github/RamanLab/iCOMIC", - "avatar": "https://avatars.githubusercontent.com/u/10651827?v=4", - "description": null, - "topics": [] + "uid": "github/patrickfuchs/buildH", + "url": "https://github.com/patrickfuchs/buildH", + "rel": "/software/repository/github/patrickfuchs/buildH", + "avatar": "https://avatars.githubusercontent.com/u/13885052?v=4", + "description": ":computer: Build hydrogen atoms from united-atom molecular dynamics of lipids and calculate the order parameters.", + "topics": [ + "python", + "lipids", + "order-parameters", + "united-atom", + "molecular-dynamics-simulation" + ] }, { - "uid": "github/meganmansfield/IGRINS_transit", - "url": "https://github.com/meganmansfield/IGRINS_transit", - "rel": "/software/repository/github/meganmansfield/IGRINS_transit", - "avatar": "https://avatars.githubusercontent.com/u/32969116?v=4", - "description": "Data reduction pipeline for high-resolution transiting exoplanet observations with the IGRINS spectrograph on Gemini-S", - "topics": [] + "uid": "github/josegcpa/nnunet_serve", + "url": "https://github.com/josegcpa/nnunet_serve", + "rel": "/software/repository/github/josegcpa/nnunet_serve", + "avatar": "https://avatars.githubusercontent.com/u/40271262?v=4", + "description": "A one-size-fits-all solution to run nnU-Net models. Supports TotalSegmentator models.", + "topics": [ + "docker", + "nnunet", + "wrapper" + ] }, { - "uid": "github/emunte/vaRHC", - "url": "https://github.com/emunte/vaRHC", - "rel": "/software/repository/github/emunte/vaRHC", - "avatar": "https://avatars.githubusercontent.com/u/49304354?v=4", - "description": null, + "uid": "github/uw-ipd/RoseTTAFold2", + "url": "https://github.com/uw-ipd/RoseTTAFold2", + "rel": "/software/repository/github/uw-ipd/RoseTTAFold2", + "avatar": "https://avatars.githubusercontent.com/u/39229126?v=4", + "description": "RoseTTAFold2, extends the original three-track architecture of RoseTTAFold over the full network, incorporating the concepts of Frame-aligned point error, recycling during training, and the use of a distillation set from AlphaFold2.", "topics": [] }, { - "uid": "github/jameschapman19/cca_zoo", - "url": "https://github.com/jameschapman19/cca_zoo", - "rel": "/software/repository/github/jameschapman19/cca_zoo", - "avatar": "https://avatars.githubusercontent.com/u/56592797?v=4", - "description": "Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework", + "uid": "github/linksmart/thing-directory", + "url": "https://github.com/linksmart/thing-directory", + "rel": "/software/repository/github/linksmart/thing-directory", + "avatar": "https://avatars.githubusercontent.com/u/41904448?v=4", + "description": "Directory of Web of Things (WoT) Thing Descriptions", "topics": [ - "dcca", - "deep", - "cca", - "canonical-correlation-analysis", - "kernel", - "multiview", - "pytorch", - "cca-zoo", - "multiset-cca", - "tensor-cca", - "pls" + "wot", + "web-of-things", + "w3c", + "thing-description-directory", + "tdd", + "thing-description" ] }, { - "uid": "github/FunctionalUrology/MLcps", - "url": "https://github.com/FunctionalUrology/MLcps", - "rel": "/software/repository/github/FunctionalUrology/MLcps", - "avatar": "https://avatars.githubusercontent.com/u/99481262?v=4", - "description": null, + "uid": "github/ezer/PAFway", + "url": "https://github.com/ezer/PAFway", + "rel": "/software/repository/github/ezer/PAFway", + "avatar": "https://avatars.githubusercontent.com/u/774703?v=4", + "description": "functional associations in networks", "topics": [] }, { - "uid": "github/CBIIT-CGBB/gcMECM", - "url": "https://github.com/CBIIT-CGBB/gcMECM", - "rel": "/software/repository/github/CBIIT-CGBB/gcMECM", - "avatar": "https://avatars.githubusercontent.com/u/11201085?v=4", - "description": null, + "uid": "github/flemingtonlab/SpliceV", + "url": "https://github.com/flemingtonlab/SpliceV", + "rel": "/software/repository/github/flemingtonlab/SpliceV", + "avatar": "https://avatars.githubusercontent.com/u/12562213?v=4", + "description": "Visualize coverage, canonical, and backsplice junctions.", "topics": [] }, { - "uid": "github/niosh-mining/obsplus", - "url": "https://github.com/niosh-mining/obsplus", - "rel": "/software/repository/github/niosh-mining/obsplus", - "avatar": "https://avatars.githubusercontent.com/u/32000029?v=4", - "description": "A Pandas-Centric ObsPy Expansion Pack", + "uid": "github/jgoodeve/streaktools", + "url": "https://github.com/jgoodeve/streaktools", + "rel": "/software/repository/github/jgoodeve/streaktools", + "avatar": "https://avatars.githubusercontent.com/u/71409619?v=4", + "description": "Python tools designed for the simulation, measurement and fitting of intentional satellite generated streaks for the purposes of photometric calibration", + "topics": [] + }, + { + "uid": "github/wustat/rjaf", + "url": "https://github.com/wustat/rjaf", + "rel": "/software/repository/github/wustat/rjaf", + "avatar": "https://avatars.githubusercontent.com/u/19987326?v=4", + "description": "Regularized Joint Assignment Forest with Treatment Arm Clustering", "topics": [ - "seismology", - "pandas" + "causal-inference", + "machine-learning" ] }, { - "uid": "github/conda-forge/conda-smithy", - "url": "https://github.com/conda-forge/conda-smithy", - "rel": "/software/repository/github/conda-forge/conda-smithy", - "avatar": "https://avatars3.githubusercontent.com/u/11897326?v=4", - "description": "The tool for managing conda-forge feedstocks.", + "uid": "github/HoBeZwe/SphericalScattering.jl", + "url": "https://github.com/HoBeZwe/SphericalScattering.jl", + "rel": "/software/repository/github/HoBeZwe/SphericalScattering.jl", + "avatar": "https://avatars.githubusercontent.com/u/46812729?v=4", + "description": "This package provides semi-analytical solutions to the scattering of time harmonic and static electromagnetic fields from spherical objects.", + "topics": [ + "dipole", + "electromagnetics", + "hertzian", + "julia", + "mie-scattering", + "plane-wave", + "scattering", + "sphere", + "spherical", + "fitzgerald", + "mie-series", + "ring-current", + "spherical-waves", + "time-harmonic" + ] + }, + { + "uid": "github/tBilby/tBilby", + "url": "https://github.com/tBilby/tBilby", + "rel": "/software/repository/github/tBilby/tBilby", + "avatar": "https://avatars.githubusercontent.com/u/163959154?v=4", + "description": null, "topics": [] }, { - "uid": "github/iopenshell/ezSpectrum", - "url": "https://github.com/iopenshell/ezSpectrum", - "rel": "/software/repository/github/iopenshell/ezSpectrum", - "avatar": "https://avatars.githubusercontent.com/u/10172280?v=4", + "uid": "github/micbia/SubgridClumping", + "url": "https://github.com/micbia/SubgridClumping", + "rel": "/software/repository/github/micbia/SubgridClumping", + "avatar": "https://avatars.githubusercontent.com/u/42578987?v=4", "description": null, "topics": [] }, { - "uid": "github/C-Briddon/SELCIE", - "url": "https://github.com/C-Briddon/SELCIE", - "rel": "/software/repository/github/C-Briddon/SELCIE", - "avatar": "https://avatars.githubusercontent.com/u/57907108?v=4", + "uid": "github/wuzhenao/CPPLS-MLP", + "url": "https://github.com/wuzhenao/CPPLS-MLP", + "rel": "/software/repository/github/wuzhenao/CPPLS-MLP", + "avatar": "https://avatars.githubusercontent.com/u/114455899?v=4", "description": null, "topics": [] }, { - "uid": "github/rzellem/EXOTIC", - "url": "https://github.com/rzellem/EXOTIC", - "rel": "/software/repository/github/rzellem/EXOTIC", - "avatar": "https://avatars.githubusercontent.com/u/13021111?v=4", - "description": "EXOplanet Transit Interpretation Code", + "uid": "github/Huang-lab/BEACON", + "url": "https://github.com/Huang-lab/BEACON", + "rel": "/software/repository/github/Huang-lab/BEACON", + "avatar": "https://avatars.githubusercontent.com/u/43595388?v=4", + "description": null, "topics": [] }, { - "uid": "github/drzeeshanahmed/JWES-Visual", - "url": "https://github.com/drzeeshanahmed/JWES-Visual", - "rel": "/software/repository/github/drzeeshanahmed/JWES-Visual", - "avatar": "https://avatars.githubusercontent.com/u/16215126?v=4", + "uid": "github/margudo/LSSGALPY", + "url": "https://github.com/margudo/LSSGALPY", + "rel": "/software/repository/github/margudo/LSSGALPY", + "avatar": "https://avatars.githubusercontent.com/u/7560892?v=4", + "description": "Python tool for the interactive visualization of the large-scale environment around galaxies on the 3D space ", + "topics": [] + }, + { + "uid": "github/evolbioinfo/bdei", + "url": "https://github.com/evolbioinfo/bdei", + "rel": "/software/repository/github/evolbioinfo/bdei", + "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", + "description": "Birth-Death Exposed-Infectious (BDEI) model parameter inference from phylogenetic trees", + "topics": [] + }, + { + "uid": "github/evolbioinfo/treesimulator", + "url": "https://github.com/evolbioinfo/treesimulator", + "rel": "/software/repository/github/evolbioinfo/treesimulator", + "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", "description": null, "topics": [] }, { - "uid": "github/OceanParcels/plasticparcels", - "url": "https://github.com/OceanParcels/plasticparcels", - "rel": "/software/repository/github/OceanParcels/plasticparcels", - "avatar": "https://avatars.githubusercontent.com/u/14887518?v=4", - "description": "Repository for PlasticParcels tool", + "uid": "github/evolbioinfo/bdpn", + "url": "https://github.com/evolbioinfo/bdpn", + "rel": "/software/repository/github/evolbioinfo/bdpn", + "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", + "description": "Birth-death epidemiological parameter estimator accounting for partner notification", "topics": [] }, { - "uid": "github/gmzsebastian/FLEET", - "url": "https://github.com/gmzsebastian/FLEET", - "rel": "/software/repository/github/gmzsebastian/FLEET", - "avatar": "https://avatars.githubusercontent.com/u/10391602?v=4", - "description": "Finding Luminous and Exotic Extragalactic Transients", + "uid": "github/evolbioinfo/bdct", + "url": "https://github.com/evolbioinfo/bdct", + "rel": "/software/repository/github/evolbioinfo/bdct", + "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", + "description": "Birth-death epidemiological parameter estimator accounting for partner notification", "topics": [] }, { - "uid": "github/LucyMcGowan/tipr", - "url": "https://github.com/LucyMcGowan/tipr", - "rel": "/software/repository/github/LucyMcGowan/tipr", - "avatar": "https://avatars.githubusercontent.com/u/8431897?v=4", - "description": "An R package for conducting sensitivity analyses for unmeasured confounders", + "uid": "github/inonchiu/ComEst", + "url": "https://github.com/inonchiu/ComEst", + "rel": "/software/repository/github/inonchiu/ComEst", + "avatar": "https://avatars.githubusercontent.com/u/5868298?v=4", + "description": "ComEst - a completeness estimator", "topics": [] }, { - "uid": "github/klee/klee", - "url": "https://github.com/klee/klee", - "rel": "/software/repository/github/klee/klee", - "avatar": "https://avatars.githubusercontent.com/u/6224192?v=4", - "description": "KLEE Symbolic Execution Engine", + "uid": "github/sparks-baird/xtal2png", + "url": "https://github.com/sparks-baird/xtal2png", + "rel": "/software/repository/github/sparks-baird/xtal2png", + "avatar": "https://avatars.githubusercontent.com/u/71920635?v=4", + "description": "Encode/decode a crystal structure to/from a grayscale PNG image for direct use with image-based machine learning models such as Palette.", "topics": [ - "symbolic-execution", - "klee" + "crystallography", + "image-processing", + "machine-learning", + "materials-informatics", + "python", + "materials-science" ] }, { - "uid": "github/opencollab/arpack-ng", - "url": "https://github.com/opencollab/arpack-ng", - "rel": "/software/repository/github/opencollab/arpack-ng", - "avatar": "https://avatars.githubusercontent.com/u/7782996?v=4", - "description": "Collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.", + "uid": "github/maxmahlke/ssos", + "url": "https://github.com/maxmahlke/ssos", + "rel": "/software/repository/github/maxmahlke/ssos", + "avatar": "https://avatars.githubusercontent.com/u/19716714?v=4", + "description": "Pipeline to recover astrometry and photometry of Solar System Objects in imaging surveys", + "topics": [] + }, + { + "uid": "github/WorkflowConversion/CTDConverter", + "url": "https://github.com/WorkflowConversion/CTDConverter", + "rel": "/software/repository/github/WorkflowConversion/CTDConverter", + "avatar": "https://avatars.githubusercontent.com/u/12558928?v=4", + "description": "Series of python scripts to convert CTD files into other formats such as Galaxy, CWL", + "topics": [] + }, + { + "uid": "github/WorkflowConversion/CTDopts", + "url": "https://github.com/WorkflowConversion/CTDopts", + "rel": "/software/repository/github/WorkflowConversion/CTDopts", + "avatar": "https://avatars.githubusercontent.com/u/12558928?v=4", + "description": "Gives your command-line tools a CTD-compatible interface", "topics": [ - "eigenvalue", - "linear-algebra", - "arpack", - "parpack" + "hacktoberfest", + "ctd" ] }, { - "uid": "github/Cantera/cantera", - "url": "https://github.com/Cantera/cantera", - "rel": "/software/repository/github/Cantera/cantera", - "avatar": "https://avatars2.githubusercontent.com/u/817698?v=4", - "description": "Chemical kinetics, thermodynamics, and transport tool suite", + "uid": "github/jw-lin/cbeam", + "url": "https://github.com/jw-lin/cbeam", + "rel": "/software/repository/github/jw-lin/cbeam", + "avatar": "https://avatars.githubusercontent.com/u/90280749?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/jw-lin/lightbeam", + "url": "https://github.com/jw-lin/lightbeam", + "rel": "/software/repository/github/jw-lin/lightbeam", + "avatar": "https://avatars.githubusercontent.com/u/90280749?v=4", + "description": "simulate light through weakly-guiding waveguides using the finite-differences beam propagation method on an adaptive mesh", + "topics": [] + }, + { + "uid": "github/pw31/GGchem", + "url": "https://github.com/pw31/GGchem", + "rel": "/software/repository/github/pw31/GGchem", + "avatar": "https://avatars.githubusercontent.com/u/18750275?v=4", + "description": "fast thermo-chemical equilibrium code with or without equilibrium condensation down to 100K ", + "topics": [] + }, + { + "uid": "github/mwvgroup/pwv_kpno", + "url": "https://github.com/mwvgroup/pwv_kpno", + "rel": "/software/repository/github/mwvgroup/pwv_kpno", + "avatar": "https://avatars.githubusercontent.com/u/17320017?v=4", + "description": "GPS modeling of the H20 atmospheric transmission at user customizable sites", "topics": [] }, { @@ -9449,742 +9352,717 @@ ] }, { - "uid": "github/DTsuna/binary_precursor", - "url": "https://github.com/DTsuna/binary_precursor", - "rel": "/software/repository/github/DTsuna/binary_precursor", - "avatar": "https://avatars.githubusercontent.com/u/20248820?v=4", - "description": "Light curve model of supernova precursors powered by compact object companions", - "topics": [] + "uid": "github/euclidlib/euclidlib", + "url": "https://github.com/euclidlib/euclidlib", + "rel": "/software/repository/github/euclidlib/euclidlib", + "avatar": "https://avatars.githubusercontent.com/u/160159153?v=4", + "description": "Unofficial python library for reading data products from the Euclid mission", + "topics": [ + "cosmology", + "euclid", + "library", + "python" + ] }, { - "uid": "github/DTsuna/CHIPS", - "url": "https://github.com/DTsuna/CHIPS", - "rel": "/software/repository/github/DTsuna/CHIPS", - "avatar": "https://avatars.githubusercontent.com/u/20248820?v=4", - "description": "Open source code to unveil the Complete History of Interaction-Powered Supernovae", + "uid": "github/pypeit/PypeIt", + "url": "https://github.com/pypeit/PypeIt", + "rel": "/software/repository/github/pypeit/PypeIt", + "avatar": "https://avatars1.githubusercontent.com/u/41153172?v=4", + "description": "The Python Spectroscopic Data Reduction Pipeline", "topics": [] }, { - "uid": "github/Shyentist/fish-r-man", - "url": "https://github.com/Shyentist/fish-r-man", - "rel": "/software/repository/github/Shyentist/fish-r-man", - "avatar": "https://avatars.githubusercontent.com/u/44335296?v=4", - "description": "Open-Source Shiny R Dashboard to easily query, download, analyse and visualise Global Fishing Watch data on fishing effort.", - "topics": [ - "marine-biology", - "fisheries", - "fisheries-research", - "fisheries-management", - "shiny", - "r", - "open-source", - "globalfishingwatch", - "global-fishing-watch", - "dashboard", - "fishing-effort" - ] - }, - { - "uid": "github/emhuff/Balrog", - "url": "https://github.com/emhuff/Balrog", - "rel": "/software/repository/github/emhuff/Balrog", - "avatar": "https://avatars.githubusercontent.com/u/2623781?v=4", - "description": "DES image simulation software: We dug too deeply and too greedily", + "uid": "github/metagenlab/assembly_finder", + "url": "https://github.com/metagenlab/assembly_finder", + "rel": "/software/repository/github/metagenlab/assembly_finder", + "avatar": "https://avatars.githubusercontent.com/u/33333195?v=4", + "description": "snakemake-powered cli to download genomes using NCBI datasets", "topics": [] }, { - "uid": "github/metageni/FOCUS", - "url": "https://github.com/metageni/FOCUS", - "rel": "/software/repository/github/metageni/FOCUS", - "avatar": "https://avatars.githubusercontent.com/u/614762?v=4", - "description": "FOCUS: An Agile Profiler for Metagenomic Data", + "uid": "github/metagenlab/MeSS", + "url": "https://github.com/metagenlab/MeSS", + "rel": "/software/repository/github/metagenlab/MeSS", + "avatar": "https://avatars.githubusercontent.com/u/33333195?v=4", + "description": "Snakemake pipeline for simulating shotgun metagenomic samples", "topics": [ - "metagenomes", - "kmer", - "identify-organisms", "bioinformatics", - "microbiome" + "shotgun-metagenomics", + "snakemake-workflow" ] }, { - "uid": "github/rhyspoulton/WhereWolf", - "url": "https://github.com/rhyspoulton/WhereWolf", - "rel": "/software/repository/github/rhyspoulton/WhereWolf", - "avatar": "https://avatars.githubusercontent.com/u/13027948?v=4", - "description": "Galaxy/(sub)Halo ghosting tool for N-body simulations", - "topics": [] + "uid": "github/VILLASframework/node", + "url": "https://github.com/VILLASframework/node", + "rel": "/software/repository/github/VILLASframework/node", + "avatar": "https://avatars.githubusercontent.com/u/33834284?v=4", + "description": "Connecting real-time power grid simulation equipment", + "topics": [ + "simulation", + "villas" + ] }, { - "uid": "github/rhyspoulton/OrbWeaver", - "url": "https://github.com/rhyspoulton/OrbWeaver", - "rel": "/software/repository/github/rhyspoulton/OrbWeaver", - "avatar": "https://avatars.githubusercontent.com/u/13027948?v=4", - "description": "Galaxy/(sub)halo orbital processing tool", + "uid": "github/icecube/FIRESONG", + "url": "https://github.com/icecube/FIRESONG", + "rel": "/software/repository/github/icecube/FIRESONG", + "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", + "description": "FIRst Extragalactic Simulation Of Neutrino and Gamma-ray", "topics": [] }, { - "uid": "github/exafmm/exafmm-t", - "url": "https://github.com/exafmm/exafmm-t", - "rel": "/software/repository/github/exafmm/exafmm-t", - "avatar": "https://avatars.githubusercontent.com/u/12694304?v=4", - "description": "A kernel-independent fast multipole method library with Python interface.", + "uid": "github/icecube/TauRunner", + "url": "https://github.com/icecube/TauRunner", + "rel": "/software/repository/github/icecube/TauRunner", + "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", + "description": "Code to propagate tau neutrinos at very high energies", "topics": [] }, { - "uid": "github/SCECcode/pycsep", - "url": "https://github.com/SCECcode/pycsep", - "rel": "/software/repository/github/SCECcode/pycsep", - "avatar": "https://avatars.githubusercontent.com/u/8519819?v=4", - "description": "Tools to help earthquake forecast model developers build and evaluate their forecasts", + "uid": "github/icecube/toise", + "url": "https://github.com/icecube/toise", + "rel": "/software/repository/github/icecube/toise", + "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", + "description": "Framework to describe the performance of high-energy neutrino detectors", "topics": [] }, { - "uid": "github/sonny-harman/snowball", - "url": "https://github.com/sonny-harman/snowball", - "rel": "/software/repository/github/sonny-harman/snowball", - "avatar": "https://avatars.githubusercontent.com/u/5854292?v=4", - "description": "Generalizable atmospheric mass loss calculator", - "topics": [] + "uid": "github/dh4gan/oberon", + "url": "https://github.com/dh4gan/oberon", + "rel": "/software/repository/github/dh4gan/oberon", + "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", + "description": "This C++ code models the climate of Earthlike planets under the effects of an arbitrary number and arrangement of other bodies, such as stars, planets and moons.", + "topics": [ + "climate", + "planet", + "star", + "astrophysics", + "simulation" + ] }, { - "uid": "github/Huang-CL/Magrathea", - "url": "https://github.com/Huang-CL/Magrathea", - "rel": "/software/repository/github/Huang-CL/Magrathea", - "avatar": "https://avatars.githubusercontent.com/u/13855548?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/jakobherpich/pyICs", - "url": "https://github.com/jakobherpich/pyICs", - "rel": "/software/repository/github/jakobherpich/pyICs", - "avatar": "https://avatars.githubusercontent.com/u/5030846?v=4", - "description": "An initial conditions creator for isolated galaxy formation simulations.", - "topics": [] - }, - { - "uid": "github/HajkD/LTRpred", - "url": "https://github.com/HajkD/LTRpred", - "rel": "/software/repository/github/HajkD/LTRpred", - "avatar": "https://avatars3.githubusercontent.com/u/4355251?v=4", - "description": "De novo annotation of intact retrotransposons", + "uid": "github/dh4gan/taktent", + "url": "https://github.com/dh4gan/taktent", + "rel": "/software/repository/github/dh4gan/taktent", + "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", + "description": "A Python framework for agent-based simulations of (radio) SETI observations", "topics": [ - "ltr", - "ltr-transposons", - "ltr-retrotransposons", - "genome", - "evolution", - "pipeline", - "diversification" + "seti", + "agent-based", + "simulator", + "extraterrestrial", + "intelligence" ] }, { - "uid": "github/jydu/maffilter", - "url": "https://github.com/jydu/maffilter", - "rel": "/software/repository/github/jydu/maffilter", - "avatar": "https://avatars.githubusercontent.com/u/11715877?v=4", - "description": "The MafFilter genome alignment processor", - "topics": [] - }, - { - "uid": "github/jydu/physamp", - "url": "https://github.com/jydu/physamp", - "rel": "/software/repository/github/jydu/physamp", - "avatar": "https://avatars.githubusercontent.com/u/11715877?v=4", - "description": "Phylogenetic Sampling and Optimization of sequence alignments", - "topics": [] + "uid": "github/dh4gan/tache", + "url": "https://github.com/dh4gan/tache", + "rel": "/software/repository/github/dh4gan/tache", + "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", + "description": "TensoriAl Classification of Hydrodynamic Elements", + "topics": [ + "sph", + "simulation", + "tensor", + "hydrodynamics" + ] }, { - "uid": "github/xinglunju/pyAmor", - "url": "https://github.com/xinglunju/pyAmor", - "rel": "/software/repository/github/xinglunju/pyAmor", - "avatar": "https://avatars.githubusercontent.com/u/3944252?v=4", - "description": "python code to derive temperatures using Ammonia spectral lines", + "uid": "github/dh4gan/grapus", + "url": "https://github.com/dh4gan/grapus", + "rel": "/software/repository/github/dh4gan/grapus", + "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", + "description": "Population synthesis of self-gravitating disc fragmentation and tidal downsizing in protostellar discs", "topics": [] }, { - "uid": "github/sonwell/biotools", - "url": "https://github.com/sonwell/biotools", - "rel": "/software/repository/github/sonwell/biotools", - "avatar": "https://avatars.githubusercontent.com/u/243377?v=4", - "description": "A bunch of bioinformatics tools.", + "uid": "github/kgullikson88/Companion-Finder", + "url": "https://github.com/kgullikson88/Companion-Finder", + "rel": "/software/repository/github/kgullikson88/Companion-Finder", + "avatar": "https://avatars.githubusercontent.com/u/6162186?v=4", + "description": "A set of scripts for looking for planets and binary companions in time series spectra", "topics": [] }, { - "uid": "github/kernsuite-debian/parseltongue", - "url": "https://github.com/kernsuite-debian/parseltongue", - "rel": "/software/repository/github/kernsuite-debian/parseltongue", - "avatar": "https://avatars.githubusercontent.com/u/20183892?v=4", - "description": null, + "uid": "github/kgullikson88/Telluric-Fitter", + "url": "https://github.com/kgullikson88/Telluric-Fitter", + "rel": "/software/repository/github/kgullikson88/Telluric-Fitter", + "avatar": "https://avatars.githubusercontent.com/u/6162186?v=4", + "description": "Telluric fitting made easy", "topics": [] }, { - "uid": "github/AgrDataSci/climatrends", - "url": "https://github.com/AgrDataSci/climatrends", - "rel": "/software/repository/github/AgrDataSci/climatrends", - "avatar": "https://avatars.githubusercontent.com/u/50193892?v=4", - "description": "Climate Variability Indices for Ecological Modelling", - "topics": [ - "climate-data", - "climatology", - "timeseries-analysis" - ] - }, - { - "uid": "github/H-E-L-P/XID_plus", - "url": "https://github.com/H-E-L-P/XID_plus", - "rel": "/software/repository/github/H-E-L-P/XID_plus", - "avatar": "https://avatars.githubusercontent.com/u/7880370?v=4", - "description": "Next generation XID development", + "uid": "github/jamescasbon/PyVCF", + "url": "https://github.com/jamescasbon/PyVCF", + "rel": "/software/repository/github/jamescasbon/PyVCF", + "avatar": "https://avatars.githubusercontent.com/u/97495?v=4", + "description": "A Variant Call Format reader for Python.", "topics": [] }, { - "uid": "github/cbottrell/RealSim", - "url": "https://github.com/cbottrell/RealSim", - "rel": "/software/repository/github/cbottrell/RealSim", - "avatar": "https://avatars.githubusercontent.com/u/10750507?v=4", - "description": "RealSim is the statistical observational realism suite described in Bottrell et al 2017ab and made public in Bottrell et al 2019b.", + "uid": "github/jdber1/opendrop", + "url": "https://github.com/jdber1/opendrop", + "rel": "/software/repository/github/jdber1/opendrop", + "avatar": "https://avatars.githubusercontent.com/u/12245642?v=4", + "description": "OpenDrop pendant drop tensiometry software", "topics": [] }, { - "uid": "github/cbottrell/realsim_ifs", - "url": "https://github.com/cbottrell/realsim_ifs", - "rel": "/software/repository/github/cbottrell/realsim_ifs", - "avatar": "https://avatars.githubusercontent.com/u/10750507?v=4", - "description": "Realistic synthetic integral field spectrscopy of galaxies from numerical simulations.", + "uid": "github/HinLeung622/pipes_vis", + "url": "https://github.com/HinLeung622/pipes_vis", + "rel": "/software/repository/github/HinLeung622/pipes_vis", + "avatar": "https://avatars.githubusercontent.com/u/56083013?v=4", + "description": "A small, interactive GUI/visualizer tool for SPS spectra, powered by bagpipes", "topics": [] }, { - "uid": "github/sneumann/xcms", - "url": "https://github.com/sneumann/xcms", - "rel": "/software/repository/github/sneumann/xcms", - "avatar": "https://avatars.githubusercontent.com/u/195385?v=4", - "description": "This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis", + "uid": "github/fabiopardo/qmap", + "url": "https://github.com/fabiopardo/qmap", + "rel": "/software/repository/github/fabiopardo/qmap", + "avatar": "https://avatars.githubusercontent.com/u/13062117?v=4", + "description": "Scaling All-Goals Updates in Reinforcement Learning Using Convolutional Neural Networks", "topics": [ - "bioconductor", - "metabolomics", - "mass-spectrometry", - "peak-detection", - "feature-detection", - "r" + "reinforcement-learning", + "q-learning", + "mario-bros" ] }, { - "uid": "github/hpgem/nanomesh", - "url": "https://github.com/hpgem/nanomesh", - "rel": "/software/repository/github/hpgem/nanomesh", - "avatar": "https://avatars.githubusercontent.com/u/50169972?v=4", - "description": "Python workflow tool for generating meshes from 2D and 3D microscopy image data", - "topics": [ - "meshing", - "microscopy", - "python", - "jupyter", - "image-processing" - ] + "uid": "github/fabiopardo/tonic", + "url": "https://github.com/fabiopardo/tonic", + "rel": "/software/repository/github/fabiopardo/tonic", + "avatar": "https://avatars.githubusercontent.com/u/13062117?v=4", + "description": "Tonic RL library", + "topics": [] }, { - "uid": "github/theislab/cellrank", - "url": "https://github.com/theislab/cellrank", - "rel": "/software/repository/github/theislab/cellrank", - "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", - "description": "CellRank: dynamics from multi-view single-cell data", + "uid": "github/Qile0317/APackOfTheClones", + "url": "https://github.com/Qile0317/APackOfTheClones", + "rel": "/software/repository/github/Qile0317/APackOfTheClones", + "avatar": "https://avatars.githubusercontent.com/u/43093685?v=4", + "description": "Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles.", "topics": [ - "machine-learning", - "single-cell-rna-seq", - "bioinformatics", - "rna-velocity", - "markov-chains", - "genetics", - "data-science", - "fuzzy-clustering-analyses", - "manifold-learning", + "clonal-analysis", + "single-cell", "single-cell-genomics", - "trajectory-generation", - "cell-fate-transitions", - "cell-fate-determination" + "r", + "seurat", + "immune-repertoire", + "immune-system", + "scrna-seq", + "scrnaseq" ] }, { - "uid": "github/theislab/scCODA", - "url": "https://github.com/theislab/scCODA", - "rel": "/software/repository/github/theislab/scCODA", - "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", - "description": "A Bayesian model for compositional single-cell data analysis", + "uid": "github/sebhoof/SolarAxionFlux", + "url": "https://github.com/sebhoof/SolarAxionFlux", + "rel": "/software/repository/github/sebhoof/SolarAxionFlux", + "avatar": "https://avatars.githubusercontent.com/u/15237674?v=4", + "description": "A C++/Python library for calculating the solar axion flux for different solar models and opacity codes.", "topics": [ - "tensorflow", - "compositional-changes", - "statistical-analysis", - "single-cell-rna-seq" + "physics", + "sun", + "axions", + "helioscopes", + "alps" ] }, { - "uid": "github/theislab/scanpy", - "url": "https://github.com/scverse/scanpy", - "rel": "/software/repository/github/theislab/scanpy", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "Single-cell analysis in Python. Scales to >1M cells.", + "uid": "github/csb-toolbox/CSB", + "url": "https://github.com/csb-toolbox/CSB", + "rel": "/software/repository/github/csb-toolbox/CSB", + "avatar": "https://avatars.githubusercontent.com/u/29821482?v=4", + "description": "A Python framework for structural bioinformatics.", "topics": [ - "machine-learning", - "data-science", - "visualize-data", - "transcriptomics", "bioinformatics", - "scanpy", - "anndata", - "python", - "scverse" + "algorithms", + "structural-bioinformatics", + "library" ] }, { - "uid": "github/theislab/anndata2ri", - "url": "https://github.com/theislab/anndata2ri", - "rel": "/software/repository/github/theislab/anndata2ri", - "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", - "description": "Convert between AnnData and SingleCellExperiment", - "topics": [ - "scanpy", - "single-cell", - "bioconductor", - "jupyter", - "rpy2" - ] + "uid": "github/ArenA-Crowds/Crowds", + "url": "https://github.com/ArenA-Crowds/Crowds", + "rel": "/software/repository/github/ArenA-Crowds/Crowds", + "avatar": "https://avatars1.githubusercontent.com/u/27482561?v=4", + "description": "Jupyter python notebooks related to the ArenA project", + "topics": [] }, { - "uid": "github/theislab/anndata", - "url": "https://github.com/scverse/anndata", - "rel": "/software/repository/github/theislab/anndata", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "Annotated data.", - "topics": [ - "scanpy", - "data-science", - "transcriptomics", - "bioinformatics", - "machine-learning", - "scverse" - ] + "uid": "github/stedolan/jq", + "url": "https://github.com/stedolan/jq", + "rel": "/software/repository/github/stedolan/jq", + "avatar": "https://avatars.githubusercontent.com/u/79765?v=4", + "description": "Command-line JSON processor", + "topics": [] }, { - "uid": "github/theislab/scvelo", - "url": "https://github.com/theislab/scvelo", - "rel": "/software/repository/github/theislab/scvelo", - "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", - "description": "RNA Velocity generalized through dynamical modeling", + "uid": "github/fermo-metabolomics/fermo_core", + "url": "https://github.com/fermo-metabolomics/fermo_core", + "rel": "/software/repository/github/fermo-metabolomics/fermo_core", + "avatar": "https://avatars.githubusercontent.com/u/206064852?v=4", + "description": "Data processing/analysis functionality of metabolomics dashboard FERMO", "topics": [] }, { - "uid": "github/atomec-project/atoMEC", - "url": "https://github.com/atomec-project/atoMEC", - "rel": "/software/repository/github/atomec-project/atoMEC", - "avatar": "https://avatars.githubusercontent.com/u/85865234?v=4", - "description": "Python-based average-atom code for simulations of high energy density phenomena such as in warm dense matter.", - "topics": [ - "electronic-structure", - "warm-dense-matter", - "density-functional-theory", - "atomic-physics", - "plasma-physics" - ] + "uid": "github/wangchao-malab/DeepAc4C", + "url": "https://github.com/wangchao-malab/DeepAc4C", + "rel": "/software/repository/github/wangchao-malab/DeepAc4C", + "avatar": "https://avatars.githubusercontent.com/u/37856514?v=4", + "description": null, + "topics": [] }, { - "uid": "github/unibe-icelab/thz-image-explorer", - "url": "https://github.com/unibe-icelab/thz-image-explorer", - "rel": "/software/repository/github/unibe-icelab/thz-image-explorer", - "avatar": "https://avatars.githubusercontent.com/u/193905551?v=4", - "description": "THz Image Explorer is an application for THz time-domain image analysis.", + "uid": "github/WSWUP/gridwxcomp", + "url": "https://github.com/WSWUP/gridwxcomp", + "rel": "/software/repository/github/WSWUP/gridwxcomp", + "avatar": "https://avatars.githubusercontent.com/u/23201768?v=4", + "description": "Comparison of weather station and gridded climate datasets", "topics": [ - "analysis", - "rust", - "thz", - "thz-tds" + "bias-correction", + "climate", + "data", + "gridded", + "spatial-analysis", + "weather" ] }, { - "uid": "github/Hoohm/CITE-seq-Count", - "url": "https://github.com/Hoohm/CITE-seq-Count", - "rel": "/software/repository/github/Hoohm/CITE-seq-Count", - "avatar": "https://avatars.githubusercontent.com/u/1267560?v=4", - "description": "A tool that allows to get UMI counts from a single cell protein assay", + "uid": "github/WSWUP/agweather-qaqc", + "url": "https://github.com/WSWUP/agweather-qaqc", + "rel": "/software/repository/github/WSWUP/agweather-qaqc", + "avatar": "https://avatars.githubusercontent.com/u/23201768?v=4", + "description": "Visualized QA/QC of weather station data", "topics": [ - "single-cell", - "citeseq", - "10x", - "dropseq" + "evapotranspiration", + "python", + "quality-assurance", + "quality-control", + "weather-data", + "weather-station" ] }, { - "uid": "github/Social-Evolution-and-Behavior/anTraX", - "url": "https://github.com/Social-Evolution-and-Behavior/anTraX", - "rel": "/software/repository/github/Social-Evolution-and-Behavior/anTraX", - "avatar": "https://avatars.githubusercontent.com/u/16811010?v=4", - "description": "anTraX: high throughput tracking of color-tagged insects", - "topics": [ - "video-tracking", - "behavioral-tracking", - "collective-behavior", - "social-behavior", - "social-insects", - "ants", - "machine-vision", - "machine-learning", - "tensorflow" - ] + "uid": "github/esandford/EightBitTransit", + "url": "https://github.com/esandford/EightBitTransit", + "rel": "/software/repository/github/esandford/EightBitTransit", + "avatar": "https://avatars.githubusercontent.com/u/5023731?v=4", + "description": "Calculate light curves from pixel grids, and recover shadow images from light curves.", + "topics": [] }, { - "uid": "github/JuBiotech/peak-performance", - "url": "https://github.com/JuBiotech/peak-performance", - "rel": "/software/repository/github/JuBiotech/peak-performance", - "avatar": "https://avatars.githubusercontent.com/u/81701481?v=4", - "description": "A Python toolbox for Bayesian inference of peak areas.", - "topics": [ - "bayesian-inference", - "hplc", - "liquid-chromatography", - "mass-spectrometry", - "metabolomics" - ] + "uid": "github/AlanPearl/diffopt", + "url": "https://github.com/AlanPearl/diffopt", + "rel": "/software/repository/github/AlanPearl/diffopt", + "avatar": "https://avatars.githubusercontent.com/u/20649347?v=4", + "description": "Collection of packages aiding in parallelization and optimization of differentiable and many-parameter models", + "topics": [] }, { - "uid": "github/ronshnapp/MyPTV", - "url": "https://github.com/ronshnapp/MyPTV", - "rel": "/software/repository/github/ronshnapp/MyPTV", - "avatar": "https://avatars.githubusercontent.com/u/34024910?v=4", - "description": "MyPTV is an open source library designed for 3D particle Tracking (3D-PTV) measurements", + "uid": "github/sPaMFouR/RedPipe", + "url": "https://github.com/sPaMFouR/RedPipe", + "rel": "/software/repository/github/sPaMFouR/RedPipe", + "avatar": "https://avatars.githubusercontent.com/u/13534521?v=4", + "description": "Python Scripts for Data Reduction and Analysis", "topics": [ - "python", - "particle-tracking", - "fluid-mechanics", - "experiments", - "measurements", - "photogrammetry", - "turbulence", - "3d-ptv" + "data-reduction", + "photometry-pipeline", + "spectroscopy", + "transients", + "analysis" ] }, { - "uid": "github/aikubo/LinkingLines", - "url": "https://github.com/aikubo/LinkingLines", - "rel": "/software/repository/github/aikubo/LinkingLines", - "avatar": "https://avatars.githubusercontent.com/u/51497688?v=4", - "description": "Link and Cluster Cartesian Line Segments", + "uid": "github/fdebras/ECLIPS3D", + "url": "https://github.com/fdebras/ECLIPS3D", + "rel": "/software/repository/github/fdebras/ECLIPS3D", + "avatar": "https://avatars.githubusercontent.com/u/49026312?v=4", + "description": "Public code for linear wave and circulation calculations, developed originally for planetary atmospheres.", "topics": [] }, { - "uid": "github/nithyanandan/PRISim", - "url": "https://github.com/nithyanandan/PRISim", - "rel": "/software/repository/github/nithyanandan/PRISim", - "avatar": "https://avatars.githubusercontent.com/u/5192621?v=4", - "description": "Precision Radio Interferometry Simulator (for radio astronomy applications)", - "topics": [ - "python", - "radio-astronomy", - "radioastronomy", - "interferometry", - "simulations", - "power-spectrum", - "astronomy", - "cosmology" - ] + "uid": "github/adcameron/ffancy", + "url": "https://github.com/adcameron/ffancy", + "rel": "/software/repository/github/adcameron/ffancy", + "avatar": "https://avatars.githubusercontent.com/u/13779543?v=4", + "description": "Software package for testing of the Fast Folding Algorithm (FFA)", + "topics": [] }, { - "uid": "github/cau-se/ARCHES-PiCar-X", - "url": "https://github.com/cau-se/ARCHES-PiCar-X", - "rel": "/software/repository/github/cau-se/ARCHES-PiCar-X", - "avatar": "https://avatars.githubusercontent.com/u/41943984?v=4", - "description": "Software for digital twin research", + "uid": "github/hablabx/rfast", + "url": "https://github.com/hablabx/rfast", + "rel": "/software/repository/github/hablabx/rfast", + "avatar": "https://avatars.githubusercontent.com/u/51726059?v=4", + "description": "A fast tool for planetary spectral forward and inverse modeling.", "topics": [] }, { - "uid": "github/hibridon/hibridon", - "url": "https://github.com/hibridon/hibridon", - "rel": "/software/repository/github/hibridon/hibridon", - "avatar": "https://avatars.githubusercontent.com/u/81297253?v=4", - "description": "Hibridon is a program package to solve the close-coupled equations which occur in the quantum treatment of inelastic atomic and molecular collisions. Gas-phase scattering, photodissociation, collisions of atoms and/or molecules with flat surfaces, and bound states of weakly-bound complexes can be treated", + "uid": "github/peikuan/WBBC", + "url": "https://github.com/peikuan/WBBC", + "rel": "/software/repository/github/peikuan/WBBC", + "avatar": "https://avatars.githubusercontent.com/u/103729199?v=4", + "description": "Westlake BioBank for Chinese pilot project", "topics": [] }, { - "uid": "github/radiosunpy/RadioSunPy", - "url": "https://github.com/radiosunpy/RadioSunPy", - "rel": "/software/repository/github/radiosunpy/RadioSunPy", - "avatar": "https://avatars.githubusercontent.com/u/181330173?v=4", - "description": "RATAN-600 radioastronomical solar data and methods Python library ", - "topics": [ - "physics", - "radio-astronomy", - "solar-physics" - ] + "uid": "github/pkugyf/MST", + "url": "https://github.com/pkugyf/MST", + "rel": "/software/repository/github/pkugyf/MST", + "avatar": "https://avatars.githubusercontent.com/u/31844573?v=4", + "description": null, + "topics": [] }, { - "uid": "github/KerryAM-R/ggVolcanoR", - "url": "https://github.com/KerryAM-R/ggVolcanoR", - "rel": "/software/repository/github/KerryAM-R/ggVolcanoR", - "avatar": "https://avatars.githubusercontent.com/u/83262343?v=4", + "uid": "github/chocoteam/pychoco", + "url": "https://github.com/chocoteam/pychoco", + "rel": "/software/repository/github/chocoteam/pychoco", + "avatar": "https://avatars.githubusercontent.com/u/3829941?v=4", "description": null, "topics": [] }, { - "uid": "github/moranegg/AffectationRO", - "url": "https://github.com/moranegg/AffectationRO", - "rel": "/software/repository/github/moranegg/AffectationRO", - "avatar": "https://avatars.githubusercontent.com/u/6273005?v=4", - "description": "Projet en recherche op\u00e9rationelle ", + "uid": "github/chocoteam/choco-solver", + "url": "https://github.com/chocoteam/choco-solver", + "rel": "/software/repository/github/chocoteam/choco-solver", + "avatar": "https://avatars.githubusercontent.com/u/3829941?v=4", + "description": "An open-source Java library for Constraint Programming", "topics": [ - "operational-research", - "glpk" + "constraint-programming", + "solver", + "constraints", + "csp", + "copr", + "constraint-satisfaction-problem", + "java", + "constraint-solver", + "constraint-optimisation-problem" ] }, { - "uid": "github/moranegg/deposit-template", - "url": "https://github.com/moranegg/deposit-template", - "rel": "/software/repository/github/moranegg/deposit-template", - "avatar": "https://avatars.githubusercontent.com/u/6273005?v=4", - "description": "This is a deposit template repository to help researchers in starting their project in a online VCS", - "topics": [] - }, - { - "uid": "github/antwiser/ChemFH", - "url": "https://github.com/antwiser/ChemFH", - "rel": "/software/repository/github/antwiser/ChemFH", - "avatar": "https://avatars.githubusercontent.com/u/86821301?v=4", - "description": "Utilizing high-quality database and Directed Message Passing Neural Network (DMPNN) architectures, ChemFH enhances the efficiency of drug R&D by achieving reliable detection of frequent hitters in colloidal aggregate, firefly luciferase reporter enzyme inhibition, fluorescence, chemical reactivity, and promiscuity.", - "topics": [] + "uid": "github/williamjameshandley/anesthetic", + "url": "https://github.com/williamjameshandley/anesthetic", + "rel": "/software/repository/github/williamjameshandley/anesthetic", + "avatar": "https://avatars.githubusercontent.com/u/3708486?v=4", + "description": "Nested Sampling post-processing and plotting", + "topics": [ + "nested-sampling", + "bayesian-inference", + "mcmc", + "samples", + "matplotlib", + "pandas", + "fastkde", + "numpy", + "scipy" + ] }, { - "uid": "github/PynPoint/PynPoint", - "url": "https://github.com/PynPoint/PynPoint", - "rel": "/software/repository/github/PynPoint/PynPoint", - "avatar": "https://avatars.githubusercontent.com/u/37398986?v=4", - "description": "Pipeline for processing and analysis of high-contrast imaging data", - "topics": [] + "uid": "github/williamjameshandley/fgivenx", + "url": "https://github.com/williamjameshandley/fgivenx", + "rel": "/software/repository/github/williamjameshandley/fgivenx", + "avatar": "https://avatars.githubusercontent.com/u/3708486?v=4", + "description": "Functional Posterior Plotter", + "topics": [ + "bayesian-inference", + "astrostatistics", + "astrophysics", + "cosmology", + "statistics", + "matplotlib", + "plotting" + ] }, { - "uid": "github/secimTools/SECIMTools", - "url": "https://github.com/secimTools/SECIMTools", - "rel": "/software/repository/github/secimTools/SECIMTools", - "avatar": "https://avatars.githubusercontent.com/u/13206950?v=4", - "description": "A set of metabolomics tools for use in Galaxy", + "uid": "github/ChenYangyao/hipp", + "url": "https://github.com/ChenYangyao/hipp", + "rel": "/software/repository/github/ChenYangyao/hipp", + "avatar": "https://avatars.githubusercontent.com/u/17449213?v=4", + "description": "HIPP: Modern C++ Toolkit for HPC", "topics": [ - "metabolomics", - "galaxy", - "secim", - "lasso", - "anova", - "random-forest", - "pca-analysis" + "hpc", + "mpi", + "hdf5", + "simd" ] }, { - "uid": "github/comp-phys-marc/qasm-ts", - "url": "https://github.com/comp-phys-marc/qasm-ts", - "rel": "/software/repository/github/comp-phys-marc/qasm-ts", - "avatar": "https://avatars.githubusercontent.com/u/94946848?v=4", - "description": "QASM, the low-level programming language for quantum circuit specification, implemented in TypeScript.", + "uid": "github/bezuidenhoutmc/SeeKAT", + "url": "https://github.com/BezuidenhoutMC/SeeKAT", + "rel": "/software/repository/github/bezuidenhoutmc/SeeKAT", + "avatar": "https://avatars.githubusercontent.com/u/22096485?v=4", + "description": "A code for localising a single pulse detected in multiple interferometer beams.", "topics": [] }, { - "uid": "github/staphopia/staphopia-paper", - "url": "https://github.com/staphopia/staphopia-paper", - "rel": "/software/repository/github/staphopia/staphopia-paper", - "avatar": "https://avatars0.githubusercontent.com/u/9426738?v=4", - "description": "Code used for Staphopia manuscript", + "uid": "github/alex-b-davis/gubas", + "url": "https://github.com/alex-b-davis/gubas", + "rel": "/software/repository/github/alex-b-davis/gubas", + "avatar": "https://avatars.githubusercontent.com/u/54447759?v=4", + "description": "General Use Binary Asteroid Simulator", "topics": [] }, { - "uid": "github/chklovski/CheckM2", - "url": "https://github.com/chklovski/CheckM2", - "rel": "/software/repository/github/chklovski/CheckM2", - "avatar": "https://avatars.githubusercontent.com/u/54562698?v=4", - "description": "Assessing the quality of metagenome-derived genome bins using machine learning", + "uid": "github/suchanek/proteusPy", + "url": "https://github.com/suchanek/proteusPy", + "rel": "/software/repository/github/suchanek/proteusPy", + "avatar": "https://avatars.githubusercontent.com/u/4127770?v=4", + "description": "A package for the modeling and analysis of proteins of known structure", + "topics": [ + "biophysics", + "structural" + ] + }, + { + "uid": "github/computational-chemical-biology/ChemWalker", + "url": "https://github.com/computational-chemical-biology/ChemWalker", + "rel": "/software/repository/github/computational-chemical-biology/ChemWalker", + "avatar": "https://avatars.githubusercontent.com/u/50704327?v=4", + "description": null, "topics": [] }, { - "uid": "github/sina-cb/Tn-seqExplorer", - "url": "https://github.com/sina-cb/Tn-seqExplorer", - "rel": "/software/repository/github/sina-cb/Tn-seqExplorer", - "avatar": "https://avatars.githubusercontent.com/u/1153540?v=4", - "description": "Tn-seq Explorer allows users to explore and analyze Tn-seq data for prokaryotic (bacterial or archaeal) genomes. It implements two alternative methods for identification of essential genes and provides additional tools to investigate the Tn-seq data. The primary goal of the data analysis is to study fitness by identifying genes that are essential or beneficial under specific growth conditions.", + "uid": "github/rcarragh/c212", + "url": "https://github.com/rcarragh/c212", + "rel": "/software/repository/github/rcarragh/c212", + "avatar": "https://avatars1.githubusercontent.com/u/45394771?v=4", + "description": "Methods for detecting safety signals in clinical trials using groupings of adverse events by body-system or system organ class.", "topics": [] }, { - "uid": "github/abelson-lab/smMIP-tools", - "url": "https://github.com/abelson-lab/smMIP-tools", - "rel": "/software/repository/github/abelson-lab/smMIP-tools", - "avatar": "https://avatars.githubusercontent.com/u/49252737?v=4", + "uid": "github/dpthorngren/PlanetSlicer", + "url": "https://github.com/dpthorngren/PlanetSlicer", + "rel": "/software/repository/github/dpthorngren/PlanetSlicer", + "avatar": "https://avatars.githubusercontent.com/u/948369?v=4", + "description": "A simple implementation of the orange-slice algorithm for fitting brightness maps to phase curves (from Cowan and Agol 2008) extended to also handle reflected light (Mayorga et al. 2020).", + "topics": [ + "astronomy-astrophysics", + "python" + ] + }, + { + "uid": "github/rjtanner/StarburstPy", + "url": "https://github.com/rjtanner/StarburstPy", + "rel": "/software/repository/github/rjtanner/StarburstPy", + "avatar": "https://avatars.githubusercontent.com/u/58440445?v=4", + "description": "Python Wrapper for Starburst99", + "topics": [ + "astronomy", + "astrophysics", + "population-synthesis", + "stellar-populations" + ] + }, + { + "uid": "github/CBIIT-CGBB/gcMECM", + "url": "https://github.com/CBIIT-CGBB/gcMECM", + "rel": "/software/repository/github/CBIIT-CGBB/gcMECM", + "avatar": "https://avatars.githubusercontent.com/u/11201085?v=4", "description": null, "topics": [] }, { - "uid": "github/MarioRomeroC/Mixclask", - "url": "https://github.com/MarioRomeroC/Mixclask", - "rel": "/software/repository/github/MarioRomeroC/Mixclask", - "avatar": "https://avatars.githubusercontent.com/u/25634276?v=4", - "description": "Mixing cloudy and skirt", + "uid": "github/pnnl/HyperNetX", + "url": "https://github.com/pnnl/HyperNetX", + "rel": "/software/repository/github/pnnl/HyperNetX", + "avatar": "https://avatars.githubusercontent.com/u/10872965?v=4", + "description": "Python package for hypergraph analysis and visualization.", + "topics": [ + "hypergraph", + "simplicial-homology", + "property-hypergraphs", + "s-linegraph", + "hypergraphs", + "knowledge-graph", + "python", + "simplicial-complexes" + ] + }, + { + "uid": "github/pnnl/interflow", + "url": "https://github.com/pnnl/interflow", + "rel": "/software/repository/github/pnnl/interflow", + "avatar": "https://avatars.githubusercontent.com/u/10872965?v=4", + "description": "A Python package for organizing and calculating cross-sectoral interdependency flow values", "topics": [] }, { - "uid": "github/amusecode/TRES", - "url": "https://github.com/amusecode/TRES", - "rel": "/software/repository/github/amusecode/TRES", - "avatar": "https://avatars.githubusercontent.com/u/3786289?v=4", - "description": "TRiple Evolution Simulation package", + "uid": "github/GOVS-pack/GOVS", + "url": "https://github.com/GOVS-pack/GOVS", + "rel": "/software/repository/github/GOVS-pack/GOVS", + "avatar": "https://avatars.githubusercontent.com/u/85439946?v=4", + "description": "Genome optimization via virtual simulation", "topics": [] }, { - "uid": "github/amusecode/amuse", - "url": "https://github.com/amusecode/amuse", - "rel": "/software/repository/github/amusecode/amuse", - "avatar": "https://avatars1.githubusercontent.com/u/3786289?v=4", - "description": "Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE", + "uid": "github/johnlees/seer", + "url": "https://github.com/johnlees/seer", + "rel": "/software/repository/github/johnlees/seer", + "avatar": "https://avatars.githubusercontent.com/u/6331837?v=4", + "description": "sequence element (kmer) enrichment analysis", "topics": [ - "astrophysics", - "astronomy", - "simulations", - "python" + "gwas", + "bacteria", + "k-mer" ] }, { - "uid": "github/palumbom/grass", - "url": "https://github.com/palumbom/GRASS", - "rel": "/software/repository/github/palumbom/grass", - "avatar": "https://avatars.githubusercontent.com/u/19910419?v=4", - "description": "A testbed for stellar granulation in exoplanet RV searches. ", - "topics": [ - "exoplanets", - "radial-velocities", - "granulation", - "stellar-variability", - "astronomy-software" - ] + "uid": "github/johnlees/pp-sketchlib", + "url": "https://github.com/bacpop/pp-sketchlib", + "rel": "/software/repository/github/johnlees/pp-sketchlib", + "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", + "description": "Library of sketching functions used by PopPUNK", + "topics": [] }, { - "uid": "github/PyTomography/slicer_spect_recon", - "url": "https://github.com/PyTomography/slicer_spect_recon", - "rel": "/software/repository/github/PyTomography/slicer_spect_recon", - "avatar": "https://avatars.githubusercontent.com/u/177372450?v=4", - "description": "3d slicer extension for pytomography to enable easy reconstruction of SPECT images", + "uid": "github/johnlees/PopPUNK", + "url": "https://github.com/bacpop/PopPUNK", + "rel": "/software/repository/github/johnlees/PopPUNK", + "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", + "description": "PopPUNK \ud83d\udc68\u200d\ud83c\udfa4 (POPulation Partitioning Using Nucleotide Kmers)", "topics": [ - "3d-slicer-extension", - "image-reconstruction" + "bacteria", + "genomics", + "population-genetics", + "k-mer", + "sketching" ] }, { - "uid": "github/obertscheiderfhwn/RTMsim", - "url": "https://github.com/obertscheiderfhwn/RTMsim", - "rel": "/software/repository/github/obertscheiderfhwn/RTMsim", - "avatar": "https://avatars.githubusercontent.com/u/102595368?v=4", - "description": "RTMsim - A Julia module for filling simulations in Resin Transfer Moulding", + "uid": "github/melobio/Attune", + "url": "https://github.com/melobio/Attune", + "rel": "/software/repository/github/melobio/Attune", + "avatar": "https://avatars.githubusercontent.com/u/82862879?v=4", + "description": null, "topics": [] }, { - "uid": "github/csb-toolbox/CSB", - "url": "https://github.com/csb-toolbox/CSB", - "rel": "/software/repository/github/csb-toolbox/CSB", - "avatar": "https://avatars.githubusercontent.com/u/29821482?v=4", - "description": "A Python framework for structural bioinformatics.", + "uid": "github/meixichen/SpatialGEV", + "url": "https://github.com/meixichen/SpatialGEV", + "rel": "/software/repository/github/meixichen/SpatialGEV", + "avatar": "https://avatars.githubusercontent.com/u/65635345?v=4", + "description": "An efficient computational method for fitting spatial extreme value models", + "topics": [] + }, + { + "uid": "github/sverhoeven/docker-cartodb", + "url": "https://github.com/sverhoeven/docker-cartodb", + "rel": "/software/repository/github/sverhoeven/docker-cartodb", + "avatar": "https://avatars1.githubusercontent.com/u/1713488?v=4", + "description": "Dockerized CartoDB", + "topics": [] + }, + { + "uid": "github/andrew-saydjari/CloudCovErr.jl", + "url": "https://github.com/andrew-saydjari/CloudCovErr.jl", + "rel": "/software/repository/github/andrew-saydjari/CloudCovErr.jl", + "avatar": "https://avatars.githubusercontent.com/u/40186037?v=4", + "description": "Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.", "topics": [ - "bioinformatics", - "algorithms", - "structural-bioinformatics", - "library" + "julia" ] }, { - "uid": "github/ireis/PRF", - "url": "https://github.com/ireis/PRF", - "rel": "/software/repository/github/ireis/PRF", - "avatar": "https://avatars.githubusercontent.com/u/23705637?v=4", - "description": "Probabilistic Random Forest: A machine learning algorithm for noisy datasets", + "uid": "github/multiscale/muscle3", + "url": "https://github.com/multiscale/muscle3", + "rel": "/software/repository/github/multiscale/muscle3", + "avatar": "https://avatars3.githubusercontent.com/u/34157084?v=4", + "description": "The third major version of the MUltiScale Coupling Library and Environment", "topics": [] }, { - "uid": "github/cassidymwagner/fluidsf", - "url": "https://github.com/cassidymwagner/fluidsf", - "rel": "/software/repository/github/cassidymwagner/fluidsf", - "avatar": "https://avatars.githubusercontent.com/u/18169742?v=4", - "description": "FluidSF is a package used to calculate structure functions from fluid data.", + "uid": "github/panoptes-organization/panoptes", + "url": "https://github.com/panoptes-organization/panoptes", + "rel": "/software/repository/github/panoptes-organization/panoptes", + "avatar": "https://avatars3.githubusercontent.com/u/57643851?v=4", + "description": "Monitor computational workflows in real time", + "topics": [ + "workflows", + "bioinformatics", + "reproducible-research", + "biohackeu20", + "biohackeu19", + "snakemake" + ] + }, + { + "uid": "github/andersdot/photoParallax", + "url": "https://github.com/andersdot/photoParallax", + "rel": "/software/repository/github/andersdot/photoParallax", + "avatar": "https://avatars.githubusercontent.com/u/2364711?v=4", + "description": "data-driven photometric parallaxes, built with Gaia and 2MASS", "topics": [] }, { - "uid": "github/afd-illinois/grim", - "url": "https://github.com/AFD-Illinois/grim", - "rel": "/software/repository/github/afd-illinois/grim", - "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", - "description": "General Relativistic Implicit Magnetohydrodynamics", + "uid": "github/SietzeN/glottospace", + "url": "https://github.com/SietzeN/glottospace", + "rel": "/software/repository/github/SietzeN/glottospace", + "avatar": "https://avatars.githubusercontent.com/u/29064687?v=4", + "description": "Geospatial analysis of linguistic data", "topics": [] }, { - "uid": "github/BenitoFar/NestedComBat", - "url": "https://github.com/BenitoFar/NestedComBat", - "rel": "/software/repository/github/BenitoFar/NestedComBat", - "avatar": "https://avatars.githubusercontent.com/u/151839096?v=4", - "description": null, + "uid": "github/almost6heads/ConleyDynamics.jl", + "url": "https://github.com/almost6heads/ConleyDynamics.jl", + "rel": "/software/repository/github/almost6heads/ConleyDynamics.jl", + "avatar": "https://avatars.githubusercontent.com/u/19210090?v=4", + "description": "Conley index and multivector fields for Julia", "topics": [] }, { - "uid": "github/craddis1/MathWAP", - "url": "https://github.com/craddis1/MathWAP", - "rel": "/software/repository/github/craddis1/MathWAP", - "avatar": "https://avatars.githubusercontent.com/u/67746749?v=4", - "description": "Mathematica routines to compute power spectra bispectra contributions from peturbation theory", + "uid": "github/Narayana-Rao/SAR-tools", + "url": "https://github.com/Narayana-Rao/PolSAR-tools", + "rel": "/software/repository/github/Narayana-Rao/SAR-tools", + "avatar": "https://avatars.githubusercontent.com/u/50410669?v=4", + "description": "A QGIS plugin to generate polarimetric SAR descriptors.", "topics": [ - "bispectrum", - "cosmology", - "peturbation-theory", - "powerspectrum" + "polarimetric-sar-data", + "radar-vegetation", + "polarimetric-decompositions", + "sar", + "qgis3-plugin" ] }, { - "uid": "github/craddis1/CosmoWAP", - "url": "https://github.com/craddis1/CosmoWAP", - "rel": "/software/repository/github/craddis1/CosmoWAP", - "avatar": "https://avatars.githubusercontent.com/u/67746749?v=4", - "description": "Python package to analyze the fourier power spectra and bispectra with wide-separation, relativistic and primordial non-gaussian effects in large-scale structure Cosmology.", + "uid": "github/donaldRwilliams/BGGM", + "url": "https://github.com/donaldRwilliams/BGGM", + "rel": "/software/repository/github/donaldRwilliams/BGGM", + "avatar": "https://avatars3.githubusercontent.com/u/19657194?v=4", + "description": "Bayesian Gaussian Graphical Models", "topics": [ - "python3", - "theory", - "bispectrum", - "peturbation-theory", - "powerspectrum", - "cosmology", - "forecasting", - "large-scale-structure-cosmology" + "gaussian-graphical-models", + "bayes-factors", + "bayesian-hypothesis-testing" ] }, { - "uid": "github/ngltr/sinaps", - "url": "https://github.com/ngltr/sinaps", - "rel": "/software/repository/github/ngltr/sinaps", - "avatar": "https://avatars.githubusercontent.com/u/49352943?v=4", + "uid": "github/donaldRwilliams/GGMnonreg", + "url": "https://github.com/donaldRwilliams/GGMnonreg", + "rel": "/software/repository/github/donaldRwilliams/GGMnonreg", + "avatar": "https://avatars.githubusercontent.com/u/19657194?v=4", "description": null, "topics": [] }, { - "uid": "github/genialis/RNAnorm", - "url": "https://github.com/genialis/RNAnorm", - "rel": "/software/repository/github/genialis/RNAnorm", - "avatar": "https://avatars.githubusercontent.com/u/2120224?v=4", - "description": "Normalization of RNA-seq gene expression", - "topics": [] - }, - { - "uid": "github/margudo/LSSGALPY", - "url": "https://github.com/margudo/LSSGALPY", - "rel": "/software/repository/github/margudo/LSSGALPY", - "avatar": "https://avatars.githubusercontent.com/u/7560892?v=4", - "description": "Python tool for the interactive visualization of the large-scale environment around galaxies on the 3D space ", + "uid": "github/GenomicParisCentre/toulligQC", + "url": "https://github.com/GenomiqueENS/toulligQC", + "rel": "/software/repository/github/GenomicParisCentre/toulligQC", + "avatar": "https://avatars.githubusercontent.com/u/7766622?v=4", + "description": "A post sequencing QC tool for Oxford Nanopore sequencers", "topics": [] }, { - "uid": "github/vsoch/gridtest", - "url": "https://github.com/vsoch/gridtest", - "rel": "/software/repository/github/vsoch/gridtest", - "avatar": "https://avatars0.githubusercontent.com/u/814322?v=4", - "description": "grid parameters and testing for Python modules and functions", + "uid": "github/martinjzhang/scDRS", + "url": "https://github.com/martinjzhang/scDRS", + "rel": "/software/repository/github/martinjzhang/scDRS", + "avatar": "https://avatars.githubusercontent.com/u/27316293?v=4", + "description": "Single-cell disease relevance score (scDRS)", "topics": [ - "gridtest", - "yaml", - "testing" + "cell-state", + "gwas", + "single-cell-rna-seq", + "diseases-and-complex-traits", + "within-cell-type-heterogeneity" ] }, { @@ -10203,3866 +10081,3679 @@ ] }, { - "uid": "github/NumericalMathematics/PositiveIntegrators.jl", - "url": "https://github.com/NumericalMathematics/PositiveIntegrators.jl", - "rel": "/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", - "avatar": "https://avatars.githubusercontent.com/u/202252210?v=4", - "description": "A Julia library of positivity-preserving time integration methods", - "topics": [] - }, - { - "uid": "github/cmgcds/fastvpinns", - "url": "https://github.com/cmgcds/fastvpinns", - "rel": "/software/repository/github/cmgcds/fastvpinns", - "avatar": "https://avatars.githubusercontent.com/u/12926724?v=4", - "description": "FastVPINNs - A tensor-driven acceleration of VPINNs for complex geometries", + "uid": "github/vsoch/gridtest", + "url": "https://github.com/vsoch/gridtest", + "rel": "/software/repository/github/vsoch/gridtest", + "avatar": "https://avatars0.githubusercontent.com/u/814322?v=4", + "description": "grid parameters and testing for Python modules and functions", "topics": [ - "deep-learning", - "inverse-problems", - "neural-network", - "partial-differential-equations", - "physics-informed-neural-networks", - "pinn", - "scientific-machine-learning", - "tensorflow2" + "gridtest", + "yaml", + "testing" ] }, { - "uid": "github/Astroua/SCIMES", - "url": "https://github.com/Astroua/SCIMES", - "rel": "/software/repository/github/Astroua/SCIMES", - "avatar": "https://avatars.githubusercontent.com/u/5502523?v=4", - "description": "Spectral Clustering for Interstellar Molecular Emission Segmentation", - "topics": [] + "uid": "github/Cosmoglobe/zodipy", + "url": "https://github.com/Cosmoglobe/zodipy", + "rel": "/software/repository/github/Cosmoglobe/zodipy", + "avatar": "https://avatars.githubusercontent.com/u/70703518?v=4", + "description": "Zodiacal emission simulations in timestreams or HEALPix for solar system observers.", + "topics": [ + "python", + "astronomy", + "simulation", + "cmb", + "planetary-science", + "solar-system" + ] }, { - "uid": "github/Astroua/TurbuStat", - "url": "https://github.com/Astroua/TurbuStat", - "rel": "/software/repository/github/Astroua/TurbuStat", - "avatar": "https://avatars.githubusercontent.com/u/5502523?v=4", - "description": "Statistics of Turbulence Python Package", + "uid": "github/h3abionet/genesis2", + "url": "https://github.com/h3abionet/genesis2", + "rel": "/software/repository/github/h3abionet/genesis2", + "avatar": "https://avatars.githubusercontent.com/u/4301625?v=4", + "description": "Implementation of the Genesis 2 tool ", "topics": [] }, { - "uid": "github/numba/numba", - "url": "https://github.com/numba/numba", - "rel": "/software/repository/github/numba/numba", - "avatar": "https://avatars2.githubusercontent.com/u/1628082?v=4", - "description": "NumPy aware dynamic Python compiler using LLVM", + "uid": "github/cistib/origami", + "url": "https://github.com/cistib/origami", + "rel": "/software/repository/github/cistib/origami", + "avatar": "https://avatars.githubusercontent.com/u/73349299?v=4", + "description": "MATLAB-based image analysis pipeline for extracting single-cell direction-variant shape features from fluorescence images of folding epithelial sheets.", "topics": [ - "python", - "numpy", - "llvm", - "compiler", - "cuda", - "rocm", - "parallel" + "matlab-code", + "microscopy", + "image-processing" ] }, { - "uid": "github/sapearson/HSS", - "url": "https://github.com/sapearson/HSS", - "rel": "/software/repository/github/sapearson/HSS", - "avatar": "https://avatars.githubusercontent.com/u/6550771?v=4", - "description": "The Hough Stream Spotter (HSS)", - "topics": [] - }, - { - "uid": "github/ewanbarr/peasoup", - "url": "https://github.com/ewanbarr/peasoup", - "rel": "/software/repository/github/ewanbarr/peasoup", - "avatar": "https://avatars.githubusercontent.com/u/1140812?v=4", - "description": "C++/CUDA GPU pulsar searching library", + "uid": "github/sidchaini/DistClassiPy", + "url": "https://github.com/sidchaini/DistClassiPy", + "rel": "/software/repository/github/sidchaini/DistClassiPy", + "avatar": "https://avatars.githubusercontent.com/u/40721514?v=4", + "description": "A python package for a distance-based classifier which can use several different distance metrics.", "topics": [] }, { - "uid": "github/jepegit/cellpy", - "url": "https://github.com/jepegit/cellpy", - "rel": "/software/repository/github/jepegit/cellpy", - "avatar": "https://avatars.githubusercontent.com/u/16334959?v=4", - "description": "extract and tweak data from electrochemical tests of cells", + "uid": "github/bbercovici/SBGAT", + "url": "https://github.com/bbercovici/SBGAT", + "rel": "/software/repository/github/bbercovici/SBGAT", + "avatar": "https://avatars.githubusercontent.com/u/7539935?v=4", + "description": "The implementation of the Small Bodies Geophysical Analysis Tool (SBGAT)", "topics": [ - "chemistry", - "electrochemistry", - "physics", - "data-analysis", - "opensource", - "battery" + "shape-models", + "gravity-model", + "uncertainty-quantification" ] }, { - "uid": "github/yangyongsan-bio/GREAP", - "url": "https://github.com/yangyongsan-bio/GREAP", - "rel": "/software/repository/github/yangyongsan-bio/GREAP", - "avatar": "https://avatars.githubusercontent.com/u/55840134?v=4", - "description": null, + "uid": "github/souzamonteiro/cnatool", + "url": "https://github.com/souzamonteiro/cnatool", + "rel": "/software/repository/github/souzamonteiro/cnatool", + "avatar": "https://avatars.githubusercontent.com/u/723670?v=4", + "description": "Complex Network Analysis Tool", "topics": [] }, { - "uid": "github/maxmahlke/ssos", - "url": "https://github.com/maxmahlke/ssos", - "rel": "/software/repository/github/maxmahlke/ssos", - "avatar": "https://avatars.githubusercontent.com/u/19716714?v=4", - "description": "Pipeline to recover astrometry and photometry of Solar System Objects in imaging surveys", + "uid": "github/igorrivin/graphem", + "url": "https://github.com/igorrivin/graphem", + "rel": "/software/repository/github/igorrivin/graphem", + "avatar": "https://avatars.githubusercontent.com/u/9657684?v=4", + "description": null, "topics": [] }, { - "uid": "github/Ayuei/DeBEIR", - "url": "https://github.com/Ayuei/DeBEIR", - "rel": "/software/repository/github/Ayuei/DeBEIR", - "avatar": "https://avatars.githubusercontent.com/u/18545131?v=4", - "description": "Dense Bi-Encoder Retrieval for Rapid Experimentation", + "uid": "github/KVSlab/VaMPy", + "url": "https://github.com/KVSlab/VaMPy", + "rel": "/software/repository/github/KVSlab/VaMPy", + "avatar": "https://avatars.githubusercontent.com/u/42640986?v=4", + "description": "A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.", "topics": [ - "dense-retrieval", - "python", - "transformers-ranking" + "vascular", + "pre-processing", + "post-processing", + "computational-fluid-dynamics" ] }, { - "uid": "github/JDabringhausen/BiPoS1", - "url": "https://github.com/JDabringhausen/BiPoS1", - "rel": "/software/repository/github/JDabringhausen/BiPoS1", - "avatar": "https://avatars.githubusercontent.com/u/85243796?v=4", - "description": "This is the first version of the Binary Population Synthesizer (BiPoS1)", - "topics": [] - }, - { - "uid": "github/piernik-dev/piernik", - "url": "https://github.com/piernik-dev/piernik", - "rel": "/software/repository/github/piernik-dev/piernik", - "avatar": "https://avatars.githubusercontent.com/u/4697368?v=4", - "description": "Piernik MHD Code", + "uid": "github/KVSlab/turtleFSI", + "url": "https://github.com/KVSlab/turtleFSI", + "rel": "/software/repository/github/KVSlab/turtleFSI", + "avatar": "https://avatars3.githubusercontent.com/u/42640986?v=4", + "description": "Monolithic Fluid-Structure Interaction (FSI) solver", "topics": [] }, { - "uid": "github/parafields/parafields", - "url": "https://github.com/parafields/parafields", - "rel": "/software/repository/github/parafields/parafields", - "avatar": "https://avatars.githubusercontent.com/u/110537507?v=4", - "description": "Parallel Parameter Field Generator for Python", + "uid": "github/ckm3/Py-PDM", + "url": "https://github.com/ckm3/Py-PDM", + "rel": "/software/repository/github/ckm3/Py-PDM", + "avatar": "https://avatars.githubusercontent.com/u/46397714?v=4", + "description": "A Python wrapper of the Phase Dispersion Minimization (PDM), which is a C code written by Stellingwerf.", "topics": [ - "hacktoberfest", - "iwr-hacktoberfest" + "phase-dispersion-minimization", + "astrophysics", + "periodogram" ] }, { - "uid": "github/andrewmoore73/SourceDetect", - "url": "https://github.com/andrewmoore73/SourceDetect", - "rel": "/software/repository/github/andrewmoore73/SourceDetect", - "avatar": "https://avatars.githubusercontent.com/u/95614601?v=4", - "description": "CNN based event search for TESS data", + "uid": "github/ckm3/Deep-Transit", + "url": "https://github.com/ckm3/Deep-Transit", + "rel": "/software/repository/github/ckm3/Deep-Transit", + "avatar": "https://avatars.githubusercontent.com/u/46397714?v=4", + "description": "Transit identification based on the object detection algorithm", "topics": [] }, { - "uid": "github/jdonnert/WVTICs", - "url": "https://github.com/jdonnert/WVTICs", - "rel": "/software/repository/github/jdonnert/WVTICs", - "avatar": "https://avatars.githubusercontent.com/u/5123958?v=4", - "description": "SPH initial conditions using Weighted Voronoi Tesselations", + "uid": "github/raspishake/rsudp", + "url": "https://github.com/raspishake/rsudp", + "rel": "/software/repository/github/raspishake/rsudp", + "avatar": "https://avatars.githubusercontent.com/u/26871117?v=4", + "description": "Continuous visual display, sudden motion monitoring, and historical replay of Raspberry Shake data", "topics": [] }, { - "uid": "github/mmollina/viewpoly", - "url": "https://github.com/mmollina/viewpoly", - "rel": "/software/repository/github/mmollina/viewpoly", - "avatar": "https://avatars.githubusercontent.com/u/318990?v=4", - "description": "R package to visualize genetic maps and QTL analysis.", + "uid": "github/hsinnan75/GSAlign", + "url": "https://github.com/hsinnan75/GSAlign", + "rel": "/software/repository/github/hsinnan75/GSAlign", + "avatar": "https://avatars.githubusercontent.com/u/10265769?v=4", + "description": "GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison", "topics": [] }, { - "uid": "github/gerddie/maxflow", - "url": "https://github.com/gerddie/maxflow", - "rel": "/software/repository/github/gerddie/maxflow", - "avatar": "https://avatars.githubusercontent.com/u/2786969?v=4", - "description": "A library that implements the maxflow-mincut algorithm. ", + "uid": "github/hsinnan75/MapCaller", + "url": "https://github.com/hsinnan75/MapCaller", + "rel": "/software/repository/github/hsinnan75/MapCaller", + "avatar": "https://avatars.githubusercontent.com/u/10265769?v=4", + "description": "MapCaller \u2013 An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes", "topics": [] }, { - "uid": "github/dstndstn/tractor", - "url": "https://github.com/dstndstn/tractor", - "rel": "/software/repository/github/dstndstn/tractor", - "avatar": "https://avatars.githubusercontent.com/u/1065981?v=4", - "description": "The Tractor: measuring astronomical sources via probabilistic inference", + "uid": "github/wanpinglee/MOSAIK", + "url": "https://github.com/wanpinglee/MOSAIK", + "rel": "/software/repository/github/wanpinglee/MOSAIK", + "avatar": "https://avatars.githubusercontent.com/u/419304?v=4", + "description": "reference-guided aligner for next-generation sequencing technologies", "topics": [] }, { - "uid": "github/dstndstn/astrometry.net", - "url": "https://github.com/dstndstn/astrometry.net", - "rel": "/software/repository/github/dstndstn/astrometry.net", - "avatar": "https://avatars.githubusercontent.com/u/1065981?v=4", - "description": "Astrometry.net -- automatic recognition of astronomical images", + "uid": "github/bluefoxr/COINr", + "url": "https://github.com/bluefoxr/COINr", + "rel": "/software/repository/github/bluefoxr/COINr", + "avatar": "https://avatars.githubusercontent.com/u/72880276?v=4", + "description": "COINr", "topics": [] }, { - "uid": "github/bwoshea/ZEUS-MP_2", - "url": "https://github.com/bwoshea/ZEUS-MP_2", - "rel": "/software/repository/github/bwoshea/ZEUS-MP_2", - "avatar": "https://avatars.githubusercontent.com/u/7969676?v=4", - "description": "This repository is the home of the ZEUS-MP 2.0 code, which was created by John Hayes and others at the Laboratory for Computational Astrophysics at UIUC and UCSD.", + "uid": "github/onsala-space-observatory/astromorph", + "url": "https://github.com/onsala-space-observatory/astromorph", + "rel": "/software/repository/github/onsala-space-observatory/astromorph", + "avatar": "https://avatars.githubusercontent.com/u/48208845?v=4", + "description": null, "topics": [] }, { - "uid": "github/Jonathanfreundlich/CuspCore", - "url": "https://github.com/Jonathanfreundlich/CuspCore", - "rel": "/software/repository/github/Jonathanfreundlich/CuspCore", - "avatar": "https://avatars.githubusercontent.com/u/51839232?v=4", - "description": "A model for core formation in dark matter haloes and ultra-diffuse galaxies by outflow episodes", + "uid": "github/PolymathicAI/AstroCLIP", + "url": "https://github.com/PolymathicAI/AstroCLIP", + "rel": "/software/repository/github/PolymathicAI/AstroCLIP", + "avatar": "https://avatars.githubusercontent.com/u/137177858?v=4", + "description": "Multimodal contrastive pretraining for astronomical data", + "topics": [] + }, + { + "uid": "github/PetervanLunteren/EcoAssist", + "url": "https://github.com/PetervanLunteren/EcoAssist", + "rel": "/software/repository/github/PetervanLunteren/EcoAssist", + "avatar": "https://avatars.githubusercontent.com/u/85185478?v=4", + "description": "Train and deploy custom YOLOv5 species classifiers for camera trap images based around the MegaDetector model", "topics": [ - "galaxies", - "dark-matter", - "dark-matter-halos", - "feedback", - "galaxy-formation", - "galaxy-evolution" + "linux", + "macos", + "megadetector", + "python", + "windows", + "cameratraps", + "object-detection", + "yolov5", + "annotation-tool", + "deploy", + "machine-learning", + "train", + "conservation", + "ecology" ] }, { - "uid": "github/dgrin1/axionCAMB", - "url": "https://github.com/dgrin1/axionCAMB", - "rel": "/software/repository/github/dgrin1/axionCAMB", - "avatar": "https://avatars.githubusercontent.com/u/14116622?v=4", - "description": null, + "uid": "github/naonori/hitomi", + "url": "https://github.com/naonori/hitomi", + "rel": "/software/repository/github/naonori/hitomi", + "avatar": "https://avatars.githubusercontent.com/u/9441428?v=4", + "description": "Public repository for the Hitomi Code", "topics": [] }, { - "uid": "github/biaslab/RxInfer.jl", - "url": "https://github.com/biaslab/RxInfer.jl", - "rel": "/software/repository/github/biaslab/RxInfer.jl", - "avatar": "https://avatars.githubusercontent.com/u/6670190?v=4", - "description": "Julia package for automated Bayesian inference on a factor graph with reactive message passing", + "uid": "github/obertscheiderfhwn/RTMsim", + "url": "https://github.com/obertscheiderfhwn/RTMsim", + "rel": "/software/repository/github/obertscheiderfhwn/RTMsim", + "avatar": "https://avatars.githubusercontent.com/u/102595368?v=4", + "description": "RTMsim - A Julia module for filling simulations in Resin Transfer Moulding", "topics": [] }, { - "uid": "github/SihaoCheng/WD_models", - "url": "https://github.com/SihaoCheng/WD_models", - "rel": "/software/repository/github/SihaoCheng/WD_models", - "avatar": "https://avatars.githubusercontent.com/u/35247024?v=4", - "description": "I provide a python package for transformations between WD photometry (Gaia, SDSS, WISE, and many more) and physical parameters, based on interpolation of existing atmosphere grid and cooling models. If you use this tool, please cite this website and the corresponding papers of atmosphere grid (synthetic colors) and cooling models. ", + "uid": "github/matteobreschi/bajes", + "url": "https://github.com/matteobreschi/bajes", + "rel": "/software/repository/github/matteobreschi/bajes", + "avatar": "https://avatars.githubusercontent.com/u/42244716?v=4", + "description": "Bayesian Jenaer software", + "topics": [ + "bayesian-inference", + "astrophysics", + "gravitational-waves", + "kilonovae", + "multi-messenger", + "python", + "sampling-methods" + ] + }, + { + "uid": "github/daehwankimlab/hisat2", + "url": "https://github.com/DaehwanKimLab/hisat2", + "rel": "/software/repository/github/daehwankimlab/hisat2", + "avatar": "https://avatars.githubusercontent.com/u/55465846?v=4", + "description": "Graph-based alignment (Hierarchical Graph FM index)", "topics": [] }, { - "uid": "github/DessimozLab/omamer", - "url": "https://github.com/DessimozLab/omamer", - "rel": "/software/repository/github/DessimozLab/omamer", - "avatar": "https://avatars.githubusercontent.com/u/16049503?v=4", - "description": "OMAmer - tree-driven and alignment-free protein assignment to sub-families", + "uid": "github/ptiede/Comrade.jl", + "url": "https://github.com/ptiede/Comrade.jl", + "rel": "/software/repository/github/ptiede/Comrade.jl", + "avatar": "https://avatars.githubusercontent.com/u/5565461?v=4", + "description": null, "topics": [] }, { - "uid": "github/DessimozLab/read2tree", - "url": "https://github.com/DessimozLab/read2tree", - "rel": "/software/repository/github/DessimozLab/read2tree", - "avatar": "https://avatars.githubusercontent.com/u/16049503?v=4", - "description": "a tool for inferring species tree from sequencing reads", + "uid": "github/Romea/romea-core-path", + "url": "https://github.com/Romea/romea-core-path", + "rel": "/software/repository/github/Romea/romea-core-path", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/tcassanelli/pywpf", - "url": "https://github.com/tcassanelli/pywpf", - "rel": "/software/repository/github/tcassanelli/pywpf", - "avatar": "https://avatars.githubusercontent.com/u/8934433?v=4", - "description": "The purpose of this program is to see the effectivity and efficiency that a PCA folding analysis has compared to the Epoch Folding, which is the standard used for pulsar period computations.", + "uid": "github/Romea/romea-ros2-teleop", + "url": "https://github.com/Romea/romea-ros2-teleop", + "rel": "/software/repository/github/Romea/romea-ros2-teleop", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/neuralhydrology/neuralhydrology", - "url": "https://github.com/neuralhydrology/neuralhydrology", - "rel": "/software/repository/github/neuralhydrology/neuralhydrology", - "avatar": "https://avatars.githubusercontent.com/u/59032226?v=4", - "description": "Python library to train neural networks with a strong focus on hydrological applications.", + "uid": "github/Romea/romea-core-gps", + "url": "https://github.com/Romea/romea-core-gps", + "rel": "/software/repository/github/Romea/romea-core-gps", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/nekokoe/Plasmer", - "url": "https://github.com/nekokoe/Plasmer", - "rel": "/software/repository/github/nekokoe/Plasmer", - "avatar": "https://avatars.githubusercontent.com/u/3713987?v=4", - "description": "An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.", - "topics": [ - "bioinformatics", - "plasmid" - ] + "uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", + "url": "https://github.com/Romea/romea-ros2-robot-to-world-localisation-core", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/JLSteenwyk/ggpubfigs", - "url": "https://github.com/JLSteenwyk/ggpubfigs", - "rel": "/software/repository/github/JLSteenwyk/ggpubfigs", - "avatar": "https://avatars.githubusercontent.com/u/17225603?v=4", - "description": "colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures", + "uid": "github/Romea/romea-core-rtls", + "url": "https://github.com/Romea/romea-core-rtls", + "rel": "/software/repository/github/Romea/romea-core-rtls", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/amromics/panta", - "url": "https://github.com/amromics/panta", - "rel": "/software/repository/github/amromics/panta", - "avatar": "https://avatars.githubusercontent.com/u/41135580?v=4", - "description": "Pan-genome Analysis", + "uid": "github/Romea/hunter", + "url": "https://github.com/Romea/hunter", + "rel": "/software/repository/github/Romea/hunter", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/PMBio/peer", - "url": "https://github.com/PMBio/peer", - "rel": "/software/repository/github/PMBio/peer", - "avatar": "https://avatars.githubusercontent.com/u/578044?v=4", - "description": "A factor analysis package", + "uid": "github/Romea/romea-core-localisation-gps", + "url": "https://github.com/Romea/romea-core-localisation-gps", + "rel": "/software/repository/github/Romea/romea-core-localisation-gps", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/PMBio/spatialde2-paper", - "url": "https://github.com/PMBio/spatialde2-paper", - "rel": "/software/repository/github/PMBio/spatialde2-paper", - "avatar": "https://avatars.githubusercontent.com/u/578044?v=4", - "description": "Code to reproduce the figures (data not included)", + "uid": "github/Romea/romea-ros2-stereo-camera", + "url": "https://github.com/Romea/romea-ros2-stereo-camera", + "rel": "/software/repository/github/Romea/romea-ros2-stereo-camera", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/mmahmoudian/sivs", - "url": "https://github.com/mmahmoudian/sivs", - "rel": "/software/repository/github/mmahmoudian/sivs", - "avatar": "https://avatars.githubusercontent.com/u/390889?v=4", - "description": "An iterative feature selection method that internally utilizes varius Machine Learning methods that have embeded feature reduction in order to shrink down the feature space into a small and yet robust set.", + "uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", + "url": "https://github.com/Romea/romea-ros2-robot-to-human-localisation-core", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/EbmeyerSt/GEnView", - "url": "https://github.com/EbmeyerSt/GEnView", - "rel": "/software/repository/github/EbmeyerSt/GEnView", - "avatar": "https://avatars.githubusercontent.com/u/11669686?v=4", - "description": "GEnView - A phylogeny based comparative genomics software to analyze the genetic environment of genes", + "uid": "github/Romea/romea-ros2-camera", + "url": "https://github.com/Romea/romea-ros2-camera", + "rel": "/software/repository/github/Romea/romea-ros2-camera", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/entangled/entangled", - "url": "https://github.com/entangled/entangled", - "rel": "/software/repository/github/entangled/entangled", - "avatar": "https://avatars2.githubusercontent.com/u/58023578?v=4", - "description": "bi-directional tangle daemon for literate programming", + "uid": "github/Romea/romea-ros2-rgbd-camera", + "url": "https://github.com/Romea/romea-ros2-rgbd-camera", + "rel": "/software/repository/github/Romea/romea-ros2-rgbd-camera", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/otvam/pypeec", - "url": "https://github.com/otvam/pypeec", - "rel": "/software/repository/github/otvam/pypeec", - "avatar": "https://avatars.githubusercontent.com/u/24779927?v=4", - "description": "PyPEEC - 3D Quasi-Magnetostatic FFT/PEEC Solver", - "topics": [ - "3d", - "fft", - "magnetic", - "peec", - "voxel", - "pypeec", - "frequency-domain", - "conductor", - "electric", - "maxwell-equations", - "power-electronics", - "field-simulation" - ] + "uid": "github/Romea/scout", + "url": "https://github.com/Romea/scout", + "rel": "/software/repository/github/Romea/scout", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/tkonolige/city2ba", - "url": "https://github.com/tkonolige/city2ba", - "rel": "/software/repository/github/tkonolige/city2ba", - "avatar": "https://avatars.githubusercontent.com/u/1501680?v=4", - "description": "Tools for generating synthetic bundle adjustment datasets", - "topics": [ - "bundle-adjustment" - ] + "uid": "github/Romea/aroco", + "url": "https://github.com/Romea/aroco", + "rel": "/software/repository/github/Romea/aroco", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/BobAubouin/Python_Anesthesia_Simulator", - "url": "https://github.com/BobAubouin/Python_Anesthesia_Simulator", - "rel": "/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", - "avatar": "https://avatars.githubusercontent.com/u/32908518?v=4", - "description": "Simulate the effect of drugs during total intrevenous anesthesia", - "topics": [ - "anesthesia", - "simulation", - "drug-dosage" - ] + "uid": "github/Romea/romea-core-filtering", + "url": "https://github.com/Romea/romea-core-filtering", + "rel": "/software/repository/github/Romea/romea-core-filtering", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/utrillalab/repromin", - "url": "https://github.com/utrillalab/repromin", - "rel": "/software/repository/github/utrillalab/repromin", - "avatar": "https://avatars2.githubusercontent.com/u/47798164?v=4", + "uid": "github/Romea/adap2e", + "url": "https://github.com/Romea/adap2e", + "rel": "/software/repository/github/Romea/adap2e", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", "description": null, "topics": [] }, { - "uid": "github/cblearn/cblearn", - "url": "https://github.com/cblearn/cblearn", - "rel": "/software/repository/github/cblearn/cblearn", - "avatar": "https://avatars.githubusercontent.com/u/132082914?v=4", - "description": "Comparison-based Machine Learning in Python", - "topics": [ - "ordinal", - "embedding", - "machine-learning", - "machinelearning", - "scikit-learn", - "non-metric", - "scaling", - "multidimensional-scaling", - "multidimensional" - ] + "uid": "github/Romea/robucar", + "url": "https://github.com/Romea/robucar", + "rel": "/software/repository/github/Romea/robucar", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/karpov-sv/stdweb", - "url": "https://github.com/karpov-sv/stdweb", - "rel": "/software/repository/github/karpov-sv/stdweb", - "avatar": "https://avatars.githubusercontent.com/u/6555548?v=4", - "description": "STDWeb - Simple Transient Detection for the Web", + "uid": "github/Romea/romea-core-common", + "url": "https://github.com/Romea/romea-core-common", + "rel": "/software/repository/github/Romea/romea-core-common", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", - "url": "https://github.com/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", - "rel": "/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", - "avatar": "https://avatars.githubusercontent.com/u/55935283?v=4", - "description": "A method for time-series reconstruction of massive astronomical catalogues.", + "uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", + "url": "https://github.com/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/GeminiDRSoftware/DRAGONS", - "url": "https://github.com/GeminiDRSoftware/DRAGONS", - "rel": "/software/repository/github/GeminiDRSoftware/DRAGONS", - "avatar": "https://avatars.githubusercontent.com/u/12435450?v=4", - "description": "Data Reduction for Astronomy from Gemini Observatory North and South", - "topics": [ - "dragons", - "gemini-data", - "dragons-data-reduction", - "gemini-iraf", - "astronomy", - "gemini-observatory" - ] + "uid": "github/Romea/romea-core-imu", + "url": "https://github.com/Romea/romea-core-imu", + "rel": "/software/repository/github/Romea/romea-core-imu", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/seqcode/allo", - "url": "https://github.com/seqcode/allo", - "rel": "/software/repository/github/seqcode/allo", - "avatar": "https://avatars.githubusercontent.com/u/18726545?v=4", - "description": "Allo: a multi-mapped read rescue strategy for peak based gene regulatory analyses", + "uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", + "url": "https://github.com/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/MrShoenel/metrics-as-scores", - "url": "https://github.com/MrShoenel/metrics-as-scores", - "rel": "/software/repository/github/MrShoenel/metrics-as-scores", - "avatar": "https://avatars.githubusercontent.com/u/5049151?v=4", - "description": "Contains the data and scripts needed for the application Metrics as Scores", + "uid": "github/Romea/romea-ros2-cmd-mux", + "url": "https://github.com/Romea/romea-ros2-cmd-mux", + "rel": "/software/repository/github/Romea/romea-ros2-cmd-mux", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/tidyverse/glue", - "url": "https://github.com/tidyverse/glue", - "rel": "/software/repository/github/tidyverse/glue", - "avatar": "https://avatars2.githubusercontent.com/u/22032646?v=4", - "description": "Glue strings to data in R. Small, fast, dependency free interpreted string literals.", - "topics": [ - "r", - "strings", - "string-interpolation" - ] + "uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", + "url": "https://github.com/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/tidyverse/ggplot2", - "url": "https://github.com/tidyverse/ggplot2", - "rel": "/software/repository/github/tidyverse/ggplot2", - "avatar": "https://avatars.githubusercontent.com/u/22032646?v=4", - "description": "An implementation of the Grammar of Graphics in R", - "topics": [ - "r", - "visualisation", - "data-visualisation" - ] + "uid": "github/Romea/romea-ros2-lidar", + "url": "https://github.com/Romea/romea-ros2-lidar", + "rel": "/software/repository/github/Romea/romea-ros2-lidar", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/learningsimulator/learningsimulator", - "url": "https://github.com/learningsimulator/learningsimulator", - "rel": "/software/repository/github/learningsimulator/learningsimulator", - "avatar": "https://avatars.githubusercontent.com/u/61417129?v=4", - "description": "Learning Simulator: A simulation software for animal and human learning", - "topics": [ - "associative-learning", - "reinforcement-learning", - "behavior", - "simulation", - "mathematical-modelling", - "gui", - "python" - ] + "uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", + "url": "https://github.com/Romea/romea-ros2-robot-to-robot-localisation-core", + "rel": "/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/GalSim-developers/GalSim", - "url": "https://github.com/GalSim-developers/GalSim", - "rel": "/software/repository/github/GalSim-developers/GalSim", - "avatar": "https://avatars.githubusercontent.com/u/1462196?v=4", - "description": "The modular galaxy image simulation toolkit. Documentation:", - "topics": [ - "python", - "c-plus-plus", - "astronomy", - "galaxy", - "simulation", - "simulate-images", - "weaklensing", - "lsst", - "des", - "wfirst", - "euclid" - ] + "uid": "github/Romea/husky", + "url": "https://github.com/Romea/husky", + "rel": "/software/repository/github/Romea/husky", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", - "url": "https://github.com/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", - "rel": "/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", - "avatar": "https://avatars.githubusercontent.com/u/81440794?v=4", - "description": "C# library that handles the full process of gathering biometric data from a body-worn sensor, transforming it into handcrafted feature vectors, and delivering an inferencing result in thirty-five lines of code. ", - "topics": [ - "affective-computing", - "wesad", - "microsoft-ml", - "empatica-e4" - ] + "uid": "github/Romea/cinteo", + "url": "https://github.com/Romea/cinteo", + "rel": "/software/repository/github/Romea/cinteo", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/prmunday/Immunolyser", - "url": "https://github.com/prmunday/Immunolyser", - "rel": "/software/repository/github/prmunday/Immunolyser", - "avatar": "https://avatars.githubusercontent.com/u/39306066?v=4", + "uid": "github/Romea/romea-ros2-imu", + "url": "https://github.com/Romea/romea-ros2-imu", + "rel": "/software/repository/github/Romea/romea-ros2-imu", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", "description": null, "topics": [] }, { - "uid": "github/Astro-Sean/autophot", - "url": "https://github.com/Astro-Sean/autophot", - "rel": "/software/repository/github/Astro-Sean/autophot", - "avatar": "https://avatars.githubusercontent.com/u/24963439?v=4", - "description": "The AUTOmated Photometry Of Transients (AutoPhOT) is a novel automated pipeline that is designed for rapid, publication-quality photometry of transients.", + "uid": "github/Romea/romea-ros2-joy", + "url": "https://github.com/Romea/romea-ros2-joy", + "rel": "/software/repository/github/Romea/romea-ros2-joy", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/Astro-Sean/escatter", - "url": "https://github.com/Astro-Sean/escatter", - "rel": "/software/repository/github/Astro-Sean/escatter", - "avatar": "https://avatars.githubusercontent.com/u/24963439?v=4", - "description": "Python script to perform Monte Carlo simulations of electron scattering events in interacting supernovae.", + "uid": "github/Romea/alpo", + "url": "https://github.com/Romea/alpo", + "rel": "/software/repository/github/Romea/alpo", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/LMBooth/pybci", - "url": "https://github.com/LMBooth/pybci", - "rel": "/software/repository/github/LMBooth/pybci", - "avatar": "https://avatars.githubusercontent.com/u/31129153?v=4", - "description": "Create real-time BCI's with the LSL, PyTorch, SKLearn and TensorFlow packages.", - "topics": [ - "bci", - "brain-computer-interface", - "human-computer-interaction", - "labstreaminglayer", - "machine-learning", - "lsl", - "pytorch", - "sklearn", - "tensorflow", - "human-machine-interface", - "python", - "python-brain-computer-interface" - ] + "uid": "github/Romea/romea-ros2-localisation-utils", + "url": "https://github.com/Romea/romea-ros2-localisation-utils", + "rel": "/software/repository/github/Romea/romea-ros2-localisation-utils", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/catherinezucker/radfil", - "url": "https://github.com/catherinezucker/radfil", - "rel": "/software/repository/github/catherinezucker/radfil", - "avatar": "https://avatars.githubusercontent.com/u/18339657?v=4", - "description": "Building Radial Density Profiles for Interstellar Filaments", + "uid": "github/Romea/romea-ros2-gps", + "url": "https://github.com/Romea/romea-ros2-gps", + "rel": "/software/repository/github/Romea/romea-ros2-gps", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, "topics": [] }, { - "uid": "github/XuhanLiu/DrugEx", - "url": "https://github.com/XuhanLiu/DrugEx", - "rel": "/software/repository/github/XuhanLiu/DrugEx", - "avatar": "https://avatars.githubusercontent.com/u/15225021?v=4", - "description": "Deep learning toolkit for Drug Design with Pareto-based Multi-Objective optimization in Polypharmacology", - "topics": [ - "deep-learning", - "multi-objective-optimization", - "graph-transformer", - "reinforcement-learning", - "cheminformatics" - ] + "uid": "github/Romea/romea-ros2-mobile-base", + "url": "https://github.com/Romea/romea-ros2-mobile-base", + "rel": "/software/repository/github/Romea/romea-ros2-mobile-base", + "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Nadi-System/nadi-system", - "url": "https://github.com/Nadi-System/nadi-system", - "rel": "/software/repository/github/Nadi-System/nadi-system", - "avatar": "https://avatars.githubusercontent.com/u/159494864?v=4", - "description": "Domain Specific Programming language for Network Analysis and Data Integration (NADI) System. The repo contains command line tool, IDE, python library, etc.", + "uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", + "url": "https://github.com/R-Vessel-X/SlicerRVXLiverSegmentation", + "rel": "/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", + "avatar": "https://avatars.githubusercontent.com/u/86227908?v=4", + "description": "3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X", "topics": [ - "domain-specific-language", - "geographical-information-system", - "hydrology", - "network-analysis", - "plugin-system" + "3d-slicer-extension" ] }, { - "uid": "github/open2c/polychrom", - "url": "https://github.com/open2c/polychrom", - "rel": "/software/repository/github/open2c/polychrom", - "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", - "description": "Chromosome polymer simulations and in silico capture experiments", - "topics": [ - "loop-extrusion", - "simulation", - "polymer", - "chromatin", - "chromosomes", - "hi-c" - ] + "uid": "github/bxlab/bx-python", + "url": "https://github.com/bxlab/bx-python", + "rel": "/software/repository/github/bxlab/bx-python", + "avatar": "https://avatars.githubusercontent.com/u/2084107?v=4", + "description": "Tools for manipulating biological data, particularly multiple sequence alignments", + "topics": [] }, { - "uid": "github/open2c/pairtools", - "url": "https://github.com/open2c/pairtools", - "rel": "/software/repository/github/open2c/pairtools", - "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", - "description": "CLI tools to process mapped Hi-C data", + "uid": "github/bxlab/metaWRAP", + "url": "https://github.com/bxlab/metaWRAP", + "rel": "/software/repository/github/bxlab/metaWRAP", + "avatar": "https://avatars.githubusercontent.com/u/2084107?v=4", + "description": "MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis", "topics": [] }, { - "uid": "github/roualdes/bridgestan", - "url": "https://github.com/roualdes/bridgestan", - "rel": "/software/repository/github/roualdes/bridgestan", - "avatar": "https://avatars.githubusercontent.com/u/3252729?v=4", - "description": "BridgeStan provides efficient in-memory access through Python, Julia, and R to the methods of a Stan model.", + "uid": "github/bharathramh/STRIDE-DB_Codes", + "url": "https://github.com/bharathramh/STRIDE-DB_Codes", + "rel": "/software/repository/github/bharathramh/STRIDE-DB_Codes", + "avatar": "https://avatars.githubusercontent.com/u/32830450?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/lsds/LightSaber", + "url": "https://github.com/lsds/LightSaber", + "rel": "/software/repository/github/lsds/LightSaber", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Multi-core Window-Based Stream Processing Engine", "topics": [ - "c", + "llvm", + "incremental-computation", + "aggregation", + "stream-processing", + "sliding-windows", + "numa", + "multi-core", "cpp", - "julia", - "python", - "r", - "stan" + "rdma", + "ssd", + "libaio", + "compression" ] }, { - "uid": "github/sosl/H-FISTA", - "url": "https://github.com/sosl/H-FISTA", - "rel": "/software/repository/github/sosl/H-FISTA", - "avatar": "https://avatars.githubusercontent.com/u/1500982?v=4", - "description": "Hierarchical FISTA - phase retrieval for pulsar spectroscopy", - "topics": [] + "uid": "github/lsds/TaLoS", + "url": "https://github.com/lsds/TaLoS", + "rel": "/software/repository/github/lsds/TaLoS", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Efficient TLS termination inside Intel SGX enclaves for existing applications", + "topics": [ + "enclave", + "sgx-enclave", + "tls-library", + "intel-sgx", + "tls-connection", + "talos", + "libressl" + ] }, { - "uid": "github/choosehappy/HoverFast", - "url": "https://github.com/choosehappy/HoverFast", - "rel": "/software/repository/github/choosehappy/HoverFast", - "avatar": "https://avatars.githubusercontent.com/u/9681868?v=4", - "description": "Blazing fast nuclei segmentation for brightfield Whole Slide Images", - "topics": [] + "uid": "github/lsds/SEEP", + "url": "https://github.com/lsds/SEEP", + "rel": "/software/repository/github/lsds/SEEP", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Cluster computing using Stateful Dataflow Graphs", + "topics": [ + "dataflow-programming", + "stateful", + "sdg", + "cluster-computing" + ] }, { - "uid": "github/richford/groupyr", - "url": "https://github.com/richford/groupyr", - "rel": "/software/repository/github/richford/groupyr", - "avatar": "https://avatars.githubusercontent.com/u/7978135?v=4", - "description": "groupyr: Sparse Group Lasso in Python", - "topics": [] + "uid": "github/lsds/Saber", + "url": "https://github.com/lsds/Saber", + "rel": "/software/repository/github/lsds/Saber", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Window-Based Hybrid CPU/GPU Stream Processing Engine", + "topics": [ + "stream-processing", + "hybrid", + "multicore", + "gpu", + "high-throughput", + "saber", + "stream", + "streaming-data", + "streaming", + "sliding-windows", + "multicore-cpu" + ] }, { - "uid": "github/espnet/espnet", - "url": "https://github.com/espnet/espnet", - "rel": "/software/repository/github/espnet/espnet", - "avatar": "https://avatars.githubusercontent.com/u/34493687?v=4", - "description": "End-to-End Speech Processing Toolkit", + "uid": "github/lsds/Crossbow", + "url": "https://github.com/lsds/Crossbow", + "rel": "/software/repository/github/lsds/Crossbow", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Crossbow: A Multi-GPU Deep Learning System for Training with Small Batch Sizes", "topics": [ "deep-learning", - "end-to-end", - "chainer", - "pytorch", - "kaldi", - "speech-recognition", - "speech-synthesis", - "speech-translation", - "machine-translation", - "voice-conversion", - "speech-enhancement", - "speech-separation", - "singing-voice-synthesis", - "speaker-diarization", - "spoken-language-understanding" + "training", + "machine-learning", + "gpu-acceleration" ] }, { - "uid": "github/astromb/PICsar2D", - "url": "https://github.com/astromb/PICsar2D", - "rel": "/software/repository/github/astromb/PICsar2D", - "avatar": "https://avatars.githubusercontent.com/u/8334286?v=4", - "description": "Particle In Cell pulSAR code", - "topics": [] - }, - { - "uid": "github/EliabCanul/nauyaca", - "url": "https://github.com/EliabCanul/nauyaca", - "rel": "/software/repository/github/EliabCanul/nauyaca", - "avatar": "https://avatars.githubusercontent.com/u/43527963?v=4", - "description": "Nauyaca is a tool to determine planetary masses and orbital elements through the fitting of observed mid-transit times, from a N-body approach.", + "uid": "github/lsds/sgx-lkl", + "url": "https://github.com/lsds/sgx-lkl", + "rel": "/software/repository/github/lsds/sgx-lkl", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "SGX-LKL Library OS for running Linux applications inside of Intel SGX enclaves", "topics": [ - "jupyter-notebook", - "python" + "sgx", + "trusted-execution", + "linux", + "java", + "jvm", + "enclave", + "javascipt" ] }, { - "uid": "github/UM-Bridge/umbridge", - "url": "https://github.com/UM-Bridge/umbridge", - "rel": "/software/repository/github/UM-Bridge/umbridge", - "avatar": "https://avatars.githubusercontent.com/u/84285209?v=4", - "description": null, + "uid": "github/lsds/Neptune", + "url": "https://github.com/lsds/Neptune", + "rel": "/software/repository/github/lsds/Neptune", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Neptune Execution Framework for Stream/Batch Spark Applications", "topics": [] }, { - "uid": "github/simonbesnard1/gedidb", - "url": "https://github.com/simonbesnard1/gedidb", - "rel": "/software/repository/github/simonbesnard1/gedidb", - "avatar": "https://avatars.githubusercontent.com/u/162727763?v=4", - "description": "A toolbox for processing and providing Global Ecosystem Dynamics Investigation (GEDI) L2A-B and L4A-C data", + "uid": "github/lsds/faasm", + "url": "https://github.com/faasm/faasm", + "rel": "/software/repository/github/lsds/faasm", + "avatar": "https://avatars.githubusercontent.com/u/72010129?v=4", + "description": "High-performance stateful serverless runtime based on WebAssembly", "topics": [ - "gedi", - "python", - "remote-sensing", - "tiledb" + "serverless", + "webassembly", + "faas", + "kubernetes", + "wasi", + "knative", + "cpp", + "openmp", + "mpi" ] }, { - "uid": "github/wdpozzo/raynest", - "url": "https://github.com/wdpozzo/raynest", - "rel": "/software/repository/github/wdpozzo/raynest", - "avatar": "https://avatars.githubusercontent.com/u/11406030?v=4", - "description": "Nested sampling algorithm parallelised through ray", - "topics": [] + "uid": "github/lsds/KungFu", + "url": "https://github.com/lsds/KungFu", + "rel": "/software/repository/github/lsds/KungFu", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Fast and Adaptive Distributed Machine Learning for TensorFlow, PyTorch and MindSpore.", + "topics": [ + "tensorflow", + "keras", + "distributed-training", + "distributed-systems" + ] }, { - "uid": "github/lutteropp/NetRAX", - "url": "https://github.com/lutteropp/NetRAX", - "rel": "/software/repository/github/lutteropp/NetRAX", - "avatar": "https://avatars.githubusercontent.com/u/1059869?v=4", - "description": "Phylogenetic Network Inference without ILS", + "uid": "github/lsds/Teechain", + "url": "https://github.com/lsds/Teechain", + "rel": "/software/repository/github/lsds/Teechain", + "avatar": "https://avatars.githubusercontent.com/u/989082?v=4", + "description": "Teechain: A Secure Payment Network with Asynchronous Blockchain Access", "topics": [] }, { - "uid": "github/quadram-institute-bioscience/dadaist2", - "url": "https://github.com/quadram-institute-bioscience/dadaist2", - "rel": "/software/repository/github/quadram-institute-bioscience/dadaist2", - "avatar": "https://avatars.githubusercontent.com/u/37581082?v=4", - "description": "\ud83c\udfa8 dadaist2 - Highway to R", - "topics": [ - "dada2", - "asv", - "bioinformatics", - "16s", - "amplicon-pipeline", - "taxonomy", - "phyloseq", - "metabarcoding" - ] + "uid": "github/RongquanWang/ELF-DPC", + "url": "https://github.com/RongquanWang/ELF-DPC", + "rel": "/software/repository/github/RongquanWang/ELF-DPC", + "avatar": "https://avatars.githubusercontent.com/u/29010219?v=4", + "description": "An ensemble learning framework for detecting protein complexes from PPI networks", + "topics": [] }, { - "uid": "github/haoharryfeng/NeuCA", - "url": "https://github.com/haoharryfeng/NeuCA", - "rel": "/software/repository/github/haoharryfeng/NeuCA", - "avatar": "https://avatars.githubusercontent.com/u/25249792?v=4", - "description": "Neural-network based Cell Annotation tool", + "uid": "github/ebundhoo/TAGOPSIN", + "url": "https://github.com/ebundhoo/TAGOPSIN", + "rel": "/software/repository/github/ebundhoo/TAGOPSIN", + "avatar": "https://avatars.githubusercontent.com/u/44093400?v=4", + "description": "Data(base) integration using the data warehousing approach", "topics": [] }, { - "uid": "github/nbisweden/MrBayes", - "url": "https://github.com/NBISweden/MrBayes", - "rel": "/software/repository/github/nbisweden/MrBayes", - "avatar": "https://avatars.githubusercontent.com/u/1224807?v=4", - "description": "MrBayes is a program for Bayesian inference and model choice across a wide range of phylogenetic and evolutionary models. For documentation and downloading the program, please see the home page:", - "topics": [ - "phylogenetics", - "bayesian-inference", - "markov-chain-monte-carlo", - "research-tool", - "bioinformatics" - ] + "uid": "github/akinremisa/rfsed", + "url": "https://github.com/akinremisa/rfsed", + "rel": "/software/repository/github/akinremisa/rfsed", + "avatar": "https://avatars.githubusercontent.com/u/107252532?v=4", + "description": "Package for standard and sediment correction receiver functions analysis", + "topics": [] }, { - "uid": "github/sashakolpakov/dire-jax", - "url": "https://github.com/sashakolpakov/dire-jax", - "rel": "/software/repository/github/sashakolpakov/dire-jax", - "avatar": "https://avatars.githubusercontent.com/u/5302373?v=4", - "description": "DImensionality REduction in JAX", - "topics": [ - "data-science", - "data-visualization", - "dimensionality-reduction", - "embeddings", - "jax", - "machine-learning" - ] + "uid": "github/ExaScience/elprep", + "url": "https://github.com/ExaScience/elprep", + "rel": "/software/repository/github/ExaScience/elprep", + "avatar": "https://avatars.githubusercontent.com/u/5629178?v=4", + "description": "a high-performance tool for analyzing .sam/.bam files (up to and including variant calling) in sequencing pipelines.", + "topics": [] }, { - "uid": "github/mjrfringes/haystacks", - "url": "https://github.com/mjrfringes/haystacks", - "rel": "/software/repository/github/mjrfringes/haystacks", - "avatar": "https://avatars.githubusercontent.com/u/13844169?v=4", + "uid": "github/JamieDietrich/dynamite", + "url": "https://github.com/JamieDietrich/dynamite", + "rel": "/software/repository/github/JamieDietrich/dynamite", + "avatar": "https://avatars.githubusercontent.com/u/67653347?v=4", "description": null, "topics": [] }, { - "uid": "github/bbfrederick/stabilitycalc", - "url": "https://github.com/bbfrederick/stabilitycalc", - "rel": "/software/repository/github/bbfrederick/stabilitycalc", - "avatar": "https://avatars.githubusercontent.com/u/1036755?v=4", - "description": "Automatic QC processing for fMRI data", + "uid": "github/yanzhanglab/Graph2GO", + "url": "https://github.com/yanzhanglab/Graph2GO", + "rel": "/software/repository/github/yanzhanglab/Graph2GO", + "avatar": "https://avatars1.githubusercontent.com/u/31453876?v=4", + "description": "Graph-based representation learning method for protein function prediction", "topics": [] }, { - "uid": "github/semaphoreP/whereistheplanet", - "url": "https://github.com/semaphoreP/whereistheplanet", - "rel": "/software/repository/github/semaphoreP/whereistheplanet", - "avatar": "https://avatars.githubusercontent.com/u/2245740?v=4", - "description": "Prediciting the position of exoplanets", - "topics": [ - "astronomy", - "exoplanets", - "python" - ] + "uid": "github/gabraham/flashpca", + "url": "https://github.com/gabraham/flashpca", + "rel": "/software/repository/github/gabraham/flashpca", + "avatar": "https://avatars.githubusercontent.com/u/465091?v=4", + "description": "Fast Principal Component Analysis of Large-Scale Genome-Wide Data", + "topics": [] }, { - "uid": "github/jamesrhester/Lerche.jl", - "url": "https://github.com/jamesrhester/Lerche.jl", - "rel": "/software/repository/github/jamesrhester/Lerche.jl", - "avatar": "https://avatars.githubusercontent.com/u/762686?v=4", - "description": "A Julia port of the Lark parser", + "uid": "github/csb5/lofreq", + "url": "https://github.com/CSB5/lofreq", + "rel": "/software/repository/github/csb5/lofreq", + "avatar": "https://avatars.githubusercontent.com/u/3702229?v=4", + "description": "LoFreq Star: Sensitive variant calling from sequencing data", "topics": [] }, { - "uid": "github/matteobreschi/bajes", - "url": "https://github.com/matteobreschi/bajes", - "rel": "/software/repository/github/matteobreschi/bajes", - "avatar": "https://avatars.githubusercontent.com/u/42244716?v=4", - "description": "Bayesian Jenaer software", - "topics": [ - "bayesian-inference", - "astrophysics", - "gravitational-waves", - "kilonovae", - "multi-messenger", - "python", - "sampling-methods" - ] + "uid": "github/sb-ncbr/golem", + "url": "https://github.com/sb-ncbr/golem", + "rel": "/software/repository/github/sb-ncbr/golem", + "avatar": "https://avatars.githubusercontent.com/u/108478300?v=4", + "description": "GOLEM: distribution of Gene regulatOry eLEMents within the plant promoters", + "topics": [] }, { - "uid": "github/rmjarvis/Piff", - "url": "https://github.com/rmjarvis/Piff", - "rel": "/software/repository/github/rmjarvis/Piff", - "avatar": "https://avatars.githubusercontent.com/u/623887?v=4", - "description": "PSFs In the Full FOV. A software package for modeling the point-spread function (PSF) across the full field of view (FOV). Documentation:", + "uid": "github/LBC-LNBio/parKVFinder-win", + "url": "https://github.com/LBC-LNBio/parKVFinder-win", + "rel": "/software/repository/github/LBC-LNBio/parKVFinder-win", + "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", + "description": "parKVFinder-win: thread-level parallel KVFinder for Windows ", "topics": [ - "astronomy", - "psf", - "des", - "lsst", - "weaklensing" + "cavity-detection", + "cavity-characterization", + "pymol-plugin" ] }, { - "uid": "github/rmjarvis/TreeCorr", - "url": "https://github.com/rmjarvis/TreeCorr", - "rel": "/software/repository/github/rmjarvis/TreeCorr", - "avatar": "https://avatars.githubusercontent.com/u/623887?v=4", - "description": "Code for efficiently computing 2-point and 3-point correlation functions. For documentation, go to", + "uid": "github/LBC-LNBio/pyKVFinder", + "url": "https://github.com/LBC-LNBio/pyKVFinder", + "rel": "/software/repository/github/LBC-LNBio/pyKVFinder", + "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", + "description": "pyKVFinder: Python-C parallel KVFinder", "topics": [ - "astronomy", - "python", - "des", - "lsst", - "correlation", - "weaklensing", - "largescalestructure" + "cavity-detection", + "cavity-characterization", + "python-package", + "numpy-arrays", + "scripting" ] }, { - "uid": "github/sieunhanbom04/support-exploration-matrix-factorization", - "url": "https://github.com/sieunhanbom04/support-exploration-matrix-factorization", - "rel": "/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", - "avatar": "https://avatars.githubusercontent.com/u/31831447?v=4", - "description": "Code for the paper \"Structured support exploration for multi-layer sparse matrix factorization\" - ICASSP 2020", - "topics": [] + "uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", + "url": "https://github.com/LBC-LNBio/PyMOL-KVFinder-web-Tools", + "rel": "/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", + "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", + "description": "PyMOL KVFinder-web Tools: a PyMOL v2 plugin for interacting with KVFinder-web service", + "topics": [ + "cavity-detection", + "cavity-characterization", + "webservice-client", + "pymol-plugin" + ] }, { - "uid": "github/thomgrand/fim-python", - "url": "https://github.com/thomgrand/fim-python", - "rel": "/software/repository/github/thomgrand/fim-python", - "avatar": "https://avatars.githubusercontent.com/u/73308131?v=4", - "description": "This repository implements the Fast Iterative Method (FIM) for use in python", + "uid": "github/hsocasnavarro/NICOLE", + "url": "https://github.com/hsocasnavarro/NICOLE", + "rel": "/software/repository/github/hsocasnavarro/NICOLE", + "avatar": "https://avatars.githubusercontent.com/u/5393130?v=4", + "description": "NLTE Stokes Synthesis/Inversion Code", "topics": [] }, { - "uid": "github/jgagneastro/CoMover", - "url": "https://github.com/jgagneastro/CoMover", - "rel": "/software/repository/github/jgagneastro/CoMover", - "avatar": "https://avatars.githubusercontent.com/u/10508801?v=4", - "description": null, + "uid": "github/ianvcaldas/smalldisco", + "url": "https://github.com/ianvcaldas/smalldisco", + "rel": "/software/repository/github/ianvcaldas/smalldisco", + "avatar": "https://avatars.githubusercontent.com/u/22592759?v=4", + "description": "Discovery of siRNA regions and small RNA tail quantification", "topics": [] }, { - "uid": "github/manzt/anywidget", - "url": "https://github.com/manzt/anywidget", - "rel": "/software/repository/github/manzt/anywidget", - "avatar": "https://avatars.githubusercontent.com/u/24403730?v=4", - "description": "reusable widgets made easy", + "uid": "github/johncwok/CategoricalTimeSeries.jl", + "url": "https://github.com/johncwok/CategoricalTimeSeries.jl", + "rel": "/software/repository/github/johncwok/CategoricalTimeSeries.jl", + "avatar": "https://avatars.githubusercontent.com/u/34754896?v=4", + "description": "Toolbox for categorical time-series analysis.", "topics": [ - "jupyter", - "python", - "widgets" + "categorical-data", + "time-series-analysis", + "julia" ] }, { - "uid": "github/LTeinturier/Cloud-Killer-", - "url": "https://github.com/LTeinturier/Cloud-Killer-", - "rel": "/software/repository/github/LTeinturier/Cloud-Killer-", - "avatar": "https://avatars.githubusercontent.com/u/91485873?v=4", - "description": "Project cloud killer ", - "topics": [] + "uid": "github/mne-tools/mne-lsl", + "url": "https://github.com/mne-tools/mne-lsl", + "rel": "/software/repository/github/mne-tools/mne-lsl", + "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", + "description": "A framework for real-time brain signal streaming with MNE-Python.", + "topics": [ + "neuroscience", + "lsl", + "real-time", + "neuroimaging", + "brain", + "labstreaminglayer", + "brain-computer-interfaces", + "network", + "visualisation" + ] }, { - "uid": "github/matthias-mayr/Cartesian-Impedance-Controller", - "url": "https://github.com/matthias-mayr/Cartesian-Impedance-Controller", - "rel": "/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", - "avatar": "https://avatars.githubusercontent.com/u/64466074?v=4", - "description": "A C++ implementation of Cartesian impedance control for torque-controlled manipulators with ROS bindings.", + "uid": "github/mne-tools/mne-icalabel", + "url": "https://github.com/mne-tools/mne-icalabel", + "rel": "/software/repository/github/mne-tools/mne-icalabel", + "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", + "description": "Automatic labeling of ICA components in Python.", "topics": [ - "franka-emika", - "franka-panda", - "gazebo", - "iiwa", - "kuka-iiwa", - "kuka-lbr-iiwa", - "manipulators", - "robotics", - "ros", - "compliant-control" + "eeg", + "ica", + "neuroscience", + "python" ] }, { - "uid": "github/TRIQS/solid_dmft", - "url": "https://github.com/TRIQS/solid_dmft", - "rel": "/software/repository/github/TRIQS/solid_dmft", - "avatar": "https://avatars.githubusercontent.com/u/1140373?v=4", - "description": "solid_dmft is a versatile python wrapper to perform DFT+DMFT calculations utilizing the TRIQS software library.", + "uid": "github/mne-tools/mne-python", + "url": "https://github.com/mne-tools/mne-python", + "rel": "/software/repository/github/mne-tools/mne-python", + "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", + "description": "MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python", "topics": [ - "solid-state-physics", - "dmft", - "correlated-electrons" + "python", + "neuroscience", + "electroencephalography", + "magnetoencephalography", + "electrocorticography", + "machine-learning", + "statistics", + "visualization", + "eeg", + "meg", + "ecog", + "neuroimaging" ] }, { - "uid": "github/TRIQS/ctseg", - "url": "https://github.com/TRIQS/ctseg", - "rel": "/software/repository/github/TRIQS/ctseg", - "avatar": "https://avatars.githubusercontent.com/u/1140373?v=4", - "description": "A segment picture impurity solver with spin-spin interactions. ", + "uid": "github/milkschen/leviosam2", + "url": "https://github.com/milkschen/leviosam2", + "rel": "/software/repository/github/milkschen/leviosam2", + "avatar": "https://avatars.githubusercontent.com/u/9870790?v=4", + "description": "Fast and accurate coordinate conversion between assemblies", "topics": [] }, { - "uid": "github/ishinder/EASTR", - "url": "https://github.com/ishinder/EASTR", - "rel": "/software/repository/github/ishinder/EASTR", - "avatar": "https://avatars.githubusercontent.com/u/32040472?v=4", - "description": "Emending Alignment of Spliced Transcript Reads", + "uid": "github/gnave/pybranch", + "url": "https://github.com/gnave/pybranch", + "rel": "/software/repository/github/gnave/pybranch", + "avatar": "https://avatars.githubusercontent.com/u/11167058?v=4", + "description": "A program to calculate experimental branching fractions and transition probabilities from atomic spectra", "topics": [] }, { - "uid": "github/herjy/SLIT", - "url": "https://github.com/herjy/SLIT", - "rel": "/software/repository/github/herjy/SLIT", - "avatar": "https://avatars.githubusercontent.com/u/16084926?v=4", - "description": "SLIT is a python code that provides a method for invertion of lensed images in the frame of strong gravitational lensing", + "uid": "github/gnave/Xgremlin", + "url": "https://github.com/gnave/Xgremlin", + "rel": "/software/repository/github/gnave/Xgremlin", + "avatar": "https://avatars.githubusercontent.com/u/11167058?v=4", + "description": "A code for analyzing interferograms and spectra from Fourier transform spectrometers", "topics": [] }, { - "uid": "github/keurfonluu/toughio", - "url": "https://github.com/keurfonluu/toughio", - "rel": "/software/repository/github/keurfonluu/toughio", - "avatar": "https://avatars0.githubusercontent.com/u/16566206?v=4", - "description": "Pre- and post-processing Python library for TOUGH", + "uid": "github/NOSALRO/robot_dart", + "url": "https://github.com/NOSALRO/robot_dart", + "rel": "/software/repository/github/NOSALRO/robot_dart", + "avatar": "https://avatars.githubusercontent.com/u/117092888?v=4", + "description": "RobotDART: a versatile robot simulator for robotics and machine learning researchers", "topics": [ - "tough2", - "tough3", - "preprocessing", - "postprocessing", - "io" + "dart", + "magnum", + "eigen3" ] }, { - "uid": "github/OrchardLANL/DPFEHM.jl", - "url": "https://github.com/OrchardLANL/DPFEHM.jl", - "rel": "/software/repository/github/OrchardLANL/DPFEHM.jl", - "avatar": "https://avatars.githubusercontent.com/u/70452955?v=4", - "description": "DPFEHM: A Differentiable Subsurface Flow Simulator", + "uid": "github/SSAGESproject/SSAGES", + "url": "https://github.com/SSAGESproject/SSAGES", + "rel": "/software/repository/github/SSAGESproject/SSAGES", + "avatar": "https://avatars.githubusercontent.com/u/22507151?v=4", + "description": "Software Suite for Advanced General Ensemble Simulations", "topics": [ - "subsurface-flow", - "differentiable-programming", - "adjoint-method" + "enhanced-sampling", + "collective-variables", + "lammps", + "gromacs", + "hoomd-blue", + "scientific-machine-learning", + "qbox", + "miccom" ] }, { - "uid": "github/OpenMD/OpenMD", - "url": "https://github.com/OpenMD/OpenMD", - "rel": "/software/repository/github/OpenMD/OpenMD", - "avatar": "https://avatars.githubusercontent.com/u/6164615?v=4", - "description": "Molecular Dynamics in the Open", + "uid": "github/jeetsukumaran/DendroPy", + "url": "https://github.com/jeetsukumaran/DendroPy", + "rel": "/software/repository/github/jeetsukumaran/DendroPy", + "avatar": "https://avatars.githubusercontent.com/u/26183?v=4", + "description": "A Python library for phylogenetic scripting, simulation, data processing and manipulation.", "topics": [] }, { - "uid": "github/loneknightpy/idba", - "url": "https://github.com/loneknightpy/idba", - "rel": "/software/repository/github/loneknightpy/idba", - "avatar": "https://avatars.githubusercontent.com/u/3597711?v=4", - "description": "iterative De Bruijn Graph short read assemblers", + "uid": "github/ucl-exoplanets/pylightcurve", + "url": "https://github.com/ucl-exoplanets/pylightcurve", + "rel": "/software/repository/github/ucl-exoplanets/pylightcurve", + "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", + "description": "A python package for modeling and analysing transit light-curves.", "topics": [] }, { - "uid": "github/kadyb/rgugik", - "url": "https://github.com/kadyb/rgugik", - "rel": "/software/repository/github/kadyb/rgugik", - "avatar": "https://avatars.githubusercontent.com/u/35004826?v=4", - "description": "Download datasets from Polish Head Office of Geodesy and Cartography", - "topics": [ - "geodesy", - "cartography", - "gis", - "open-data", - "poland", - "r" - ] - }, - { - "uid": "github/jjmccollum/teiphy", - "url": "https://github.com/jjmccollum/teiphy", - "rel": "/software/repository/github/jjmccollum/teiphy", - "avatar": "https://avatars.githubusercontent.com/u/15383366?v=4", - "description": "A Python package for converting TEI XML collations to NEXUS and other formats", - "topics": [ - "nexus", - "phylogenetics", - "python", - "tei-xml", - "text-encoding" - ] + "uid": "github/ucl-exoplanets/ExoGAN_public", + "url": "https://github.com/ucl-exoplanets/ExoGAN_public", + "rel": "/software/repository/github/ucl-exoplanets/ExoGAN_public", + "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", + "description": null, + "topics": [] }, { - "uid": "github/fluhus/blini", - "url": "https://github.com/fluhus/blini", - "rel": "/software/repository/github/fluhus/blini", - "avatar": "https://avatars.githubusercontent.com/u/5978130?v=4", - "description": "Lightweight nucleotide sequence search and dereplication.", + "uid": "github/ucl-exoplanets/TauREx3_public", + "url": "https://github.com/ucl-exoplanets/TauREx3_public", + "rel": "/software/repository/github/ucl-exoplanets/TauREx3_public", + "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", + "description": "Public release of TauREx3", "topics": [] }, { - "uid": "github/olivecha/guitarsounds", - "url": "https://github.com/olivecha/guitarsounds", - "rel": "/software/repository/github/olivecha/guitarsounds", - "avatar": "https://avatars.githubusercontent.com/u/78630053?v=4", - "description": "python library to analyse guitar sounds", + "uid": "github/ucl-exoplanets/ExoTETHyS", + "url": "https://github.com/ucl-exoplanets/ExoTETHyS", + "rel": "/software/repository/github/ucl-exoplanets/ExoTETHyS", + "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", + "description": null, "topics": [] }, { - "uid": "github/n-claes/legolas", - "url": "https://github.com/n-claes/legolas", - "rel": "/software/repository/github/n-claes/legolas", - "avatar": "https://avatars.githubusercontent.com/u/43474374?v=4", - "description": "Legolas: a modern tool for MHD spectroscopy", + "uid": "github/annehutter/grid-model", + "url": "https://github.com/annehutter/grid-model", + "rel": "/software/repository/github/annehutter/grid-model", + "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", + "description": "Code to compute ionization field from density fields and source catalogue (CIFOG)", "topics": [ - "magnetohydrodynamics", - "finite-elements", - "astrophysics", - "spectroscopy" + "reionization", + "redshift", + "ionization-source", + "fftw", + "mpi", + "photoionization", + "cosmological", + "astrophysics" ] }, { - "uid": "github/masadcv/FastGeodis", - "url": "https://github.com/masadcv/FastGeodis", - "rel": "/software/repository/github/masadcv/FastGeodis", - "avatar": "https://avatars.githubusercontent.com/u/3410225?v=4", - "description": "Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)", + "uid": "github/annehutter/polyspectrum", + "url": "https://github.com/annehutter/polyspectrum", + "rel": "/software/repository/github/annehutter/polyspectrum", + "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", + "description": "MPI-parallelised code to compute polyspectrum (including bispectrum) from a 3D grid", "topics": [ - "deep-learning", - "gpu", - "pytorch" + "polyspectrum", + "powerspectrum", + "bispectrum", + "mpi" ] }, { - "uid": "github/BenWibking/quokka", - "url": "https://github.com/BenWibking/quokka", - "rel": "/software/repository/github/BenWibking/quokka", - "avatar": "https://avatars.githubusercontent.com/u/1781919?v=4", - "description": "Two-moment AMR radiation hydrodynamics on GPUs for astrophysics", + "uid": "github/annehutter/astraeus", + "url": "https://github.com/annehutter/astraeus", + "rel": "/software/repository/github/annehutter/astraeus", + "avatar": "https://avatars.githubusercontent.com/u/13774169?v=4", + "description": "Home of the semi-analytical / semi-numerical galaxy evolution and reionization code ASTRAEUS", "topics": [ - "cuda", - "gpu", - "hydrodynamics", - "adaptive-mesh-refinement" + "galaxy-evolution", + "reionization", + "mpi", + "modelling", + "semi-numerical", + "astronomy", + "astrophysics", + "astrophysical-simulation" ] }, { - "uid": "github/jdidion/atropos", - "url": "https://github.com/jdidion/atropos", - "rel": "/software/repository/github/jdidion/atropos", - "avatar": "https://avatars.githubusercontent.com/u/125854?v=4", - "description": "An NGS read trimming tool that is specific, sensitive, and speedy. (production)", + "uid": "github/mosdef-hub/foyer", + "url": "https://github.com/mosdef-hub/foyer", + "rel": "/software/repository/github/mosdef-hub/foyer", + "avatar": "https://avatars.githubusercontent.com/u/25673981?v=4", + "description": "A package for atom-typing as well as applying and disseminating forcefields", "topics": [ - "python3", - "bioinformatics", - "ngs", - "trimming" + "molecular-dynamics", + "molecular-simulation", + "force-field", + "python", + "atom-typing", + "foyer", + "disseminating-forcefields" ] }, { - "uid": "github/CodeEagle22/SIRITVIS", - "url": "https://github.com/CodeEagle22/SIRITVIS", - "rel": "/software/repository/github/CodeEagle22/SIRITVIS", - "avatar": "https://avatars.githubusercontent.com/u/139004320?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/kostergroup/SIMsalabim", - "url": "https://github.com/kostergroup/SIMsalabim", - "rel": "/software/repository/github/kostergroup/SIMsalabim", - "avatar": "https://avatars.githubusercontent.com/u/64084163?v=4", - "description": "A 1D drift-diffusion simulator for semiconductor devices (LEDs, solar cells, diodes, organics, perovskites)", - "topics": [] + "uid": "github/mosdef-hub/mbuild", + "url": "https://github.com/mosdef-hub/mbuild", + "rel": "/software/repository/github/mosdef-hub/mbuild", + "avatar": "https://avatars.githubusercontent.com/u/25673981?v=4", + "description": "A hierarchical, component based molecule builder", + "topics": [ + "molecular-dynamics", + "python", + "molecular-simulation", + "molecule-builder", + "mbuild" + ] }, { - "uid": "github/ahcm/ffindex", - "url": "https://github.com/ahcm/ffindex", - "rel": "/software/repository/github/ahcm/ffindex", - "avatar": "https://avatars.githubusercontent.com/u/13995862?v=4", - "description": "simple index/database for huge amounts of small files", + "uid": "github/hsso/crete", + "url": "https://github.com/hsso/crete", + "rel": "/software/repository/github/hsso/crete", + "avatar": "https://avatars.githubusercontent.com/u/8900031?v=4", + "description": "Comet RadiativE Transfer and Excitation", "topics": [] }, { - "uid": "github/ClaudioZandonella/PRDA", - "url": "https://github.com/ClaudioZandonella/PRDA", - "rel": "/software/repository/github/ClaudioZandonella/PRDA", - "avatar": "https://avatars.githubusercontent.com/u/44664104?v=4", - "description": "Prospective and Retrospective Design Analysis", - "topics": [] + "uid": "github/glis-glis/loci", + "url": "https://github.com/glis-glis/loci", + "rel": "/software/repository/github/glis-glis/loci", + "avatar": "https://avatars.githubusercontent.com/u/31037208?v=4", + "description": "Smooth Cubic Multivariate Local Interpolations", + "topics": [ + "c", + "python", + "jupyter-notebook", + "interpolation", + "grid", + "cubic", + "local" + ] }, { - "uid": "github/cb-ge/ephor_wp4_agnostic_models", - "url": "https://github.com/cb-ge/ephor_wp4_agnostic_models", - "rel": "/software/repository/github/cb-ge/ephor_wp4_agnostic_models", - "avatar": "https://avatars.githubusercontent.com/u/79517349?v=4", + "uid": "github/PhenoApps/Coordinate", + "url": "https://github.com/PhenoApps/Coordinate", + "rel": "/software/repository/github/PhenoApps/Coordinate", + "avatar": "https://avatars.githubusercontent.com/u/28616659?v=4", "description": null, "topics": [] }, { - "uid": "github/nlppln/nlppln", - "url": "https://github.com/nlppln/nlppln", - "rel": "/software/repository/github/nlppln/nlppln", - "avatar": "https://avatars3.githubusercontent.com/u/25154063?v=4", - "description": "NLP pipeline software using common workflow language", + "uid": "github/rordenlab/dcm2niix", + "url": "https://github.com/rordenlab/dcm2niix", + "rel": "/software/repository/github/rordenlab/dcm2niix", + "avatar": "https://avatars.githubusercontent.com/u/22748159?v=4", + "description": "is a designed to convert neuroimaging data from the DICOM format to the NIfTI format.", "topics": [ - "nlp", - "cwl", - "workflow", - "pipeline", - "text-mining" - ] - }, + "dicom", + "nifti", + "mri", + "mri-images", + "research", + "neuroscience", + "neuroimaging", + "jpeg-image", + "jpeg", + "dicom-images", + "dcm", + "nii", + "gz", + "nitrc", + "dcm2niix", + "mricrogl", + "bids-format", + "nifti-format" + ] + }, { - "uid": "github/mwhosek/extlaw_H18", - "url": "https://github.com/mwhosek/extlaw_H18", - "rel": "/software/repository/github/mwhosek/extlaw_H18", - "avatar": "https://avatars.githubusercontent.com/u/5395634?v=4", - "description": "Stand-alone python code to generate extinction law between 0.8 -- 2.2 microns, from Hosek+18", - "topics": [] + "uid": "github/iancze/DiskJockey", + "url": "https://github.com/iancze/DiskJockey", + "rel": "/software/repository/github/iancze/DiskJockey", + "avatar": "https://avatars.githubusercontent.com/u/467948?v=4", + "description": "Protoplanetary Disk Modeling for Dynamical Mass Derivation", + "topics": [ + "julia", + "radmc-3d", + "astronomy", + "astrophysics", + "radio-astronomy" + ] }, { - "uid": "github/biomedia-mira/deepscm", - "url": "https://github.com/biomedia-mira/deepscm", - "rel": "/software/repository/github/biomedia-mira/deepscm", - "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", - "description": "Repository for Deep Structural Causal Models for Tractable Counterfactual Inference", + "uid": "github/iancze/PSOAP", + "url": "https://github.com/iancze/PSOAP", + "rel": "/software/repository/github/iancze/PSOAP", + "avatar": "https://avatars.githubusercontent.com/u/467948?v=4", + "description": "Tools for data-driven spectra models with Gaussian processes. Pronounced \"soap.\"", "topics": [ - "causal-inference", - "deep-learning", - "counterfactuals", - "variational-autoencoders", - "normalizing-flows" + "astronomy", + "spectroscopy", + "radial", + "velocity", + "python", + "gaussian-processes", + "radial-velocities", + "spectra", + "exoplanet", + "orbit" ] }, { - "uid": "github/biomedia-mira/masf", - "url": "https://github.com/biomedia-mira/masf", - "rel": "/software/repository/github/biomedia-mira/masf", - "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", - "description": "Domain Generalization via Model-Agnostic Learning of Semantic Features", + "uid": "github/vsulis5357/Sonification", + "url": "https://github.com/vsulis5357/Sonification", + "rel": "/software/repository/github/vsulis5357/Sonification", + "avatar": "https://avatars.githubusercontent.com/u/173300234?v=4", + "description": null, "topics": [] }, { - "uid": "github/biomedia-mira/drop2", - "url": "https://github.com/biomedia-mira/drop2", - "rel": "/software/repository/github/biomedia-mira/drop2", - "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", - "description": "drop2 - intensity-based image registration", + "uid": "github/enthought/mayavi", + "url": "https://github.com/enthought/mayavi", + "rel": "/software/repository/github/enthought/mayavi", + "avatar": "https://avatars.githubusercontent.com/u/539651?v=4", + "description": "3D visualization of scientific data in Python", "topics": [] }, { - "uid": "github/biomedia-mira/blast-ct", - "url": "https://github.com/biomedia-mira/blast-ct", - "rel": "/software/repository/github/biomedia-mira/blast-ct", - "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", - "description": "Brain Lesion Analysis and Segmentation Tool for Computed Tomography", + "uid": "github/enthought/vpsearch", + "url": "https://github.com/enthought/vpsearch", + "rel": "/software/repository/github/enthought/vpsearch", + "avatar": "https://avatars.githubusercontent.com/u/539651?v=4", + "description": "Fast similarity search for genomic sequences via vantage-point trees", "topics": [] }, { - "uid": "github/biomedia-mira/istn", - "url": "https://github.com/biomedia-mira/istn", - "rel": "/software/repository/github/biomedia-mira/istn", - "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", - "description": "Image-and-Spatial Transformer Networks", + "uid": "github/tud-hri/travia", + "url": "https://github.com/tud-hri/travia", + "rel": "/software/repository/github/tud-hri/travia", + "avatar": "https://avatars.githubusercontent.com/u/72570002?v=4", + "description": "a Traffic data Visualization and Annotation tool", + "topics": [] + }, + { + "uid": "github/tud-hri/joan", + "url": "https://github.com/tud-hri/joan", + "rel": "/software/repository/github/tud-hri/joan", + "avatar": "https://avatars.githubusercontent.com/u/72570002?v=4", + "description": "JOAN is an software package that allows to perform human-in-the loop experiments in the open source driving simulator CARLA. JOAN facilitates communication between human input devices and CARLA, the implementation of haptic feedback, systematically storing experiment data, and the automatic execution of experiments with multiple experimental conditions.", "topics": [ - "image-registration", - "deep-learning", - "spatial-transformer-networks", - "medical-imaging" + "human-in-the-loop", + "experiments", + "driving-simulator" ] }, { - "uid": "github/holmescao/ANTS_marking_and_analysis_tools", - "url": "https://github.com/holmescao/ANTS_marking_and_analysis_tools", - "rel": "/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", - "avatar": "https://avatars.githubusercontent.com/u/80808710?v=4", + "uid": "github/gouverneurp/eVAS", + "url": "https://github.com/gouverneurp/eVAS", + "rel": "/software/repository/github/gouverneurp/eVAS", + "avatar": "https://avatars.githubusercontent.com/u/111120410?v=4", "description": null, "topics": [] }, { - "uid": "github/IPIS-XieLei/CNTSeg", - "url": "https://github.com/IPIS-XieLei/CNTSeg", - "rel": "/software/repository/github/IPIS-XieLei/CNTSeg", - "avatar": "https://avatars.githubusercontent.com/u/103489682?v=4", - "description": "CNTSeg: A multimodal deep-learning-based network for cranial nerves tract segmentation", + "uid": "github/jamesrhester/Lerche.jl", + "url": "https://github.com/jamesrhester/Lerche.jl", + "rel": "/software/repository/github/jamesrhester/Lerche.jl", + "avatar": "https://avatars.githubusercontent.com/u/762686?v=4", + "description": "A Julia port of the Lark parser", "topics": [] }, { - "uid": "github/KskAdch/TopologicalNumbers.jl", - "url": "https://github.com/KskAdch/TopologicalNumbers.jl", - "rel": "/software/repository/github/KskAdch/TopologicalNumbers.jl", - "avatar": "https://avatars.githubusercontent.com/u/139373570?v=4", - "description": "A Julia package for calculating topological numbers", + "uid": "github/moranegg/deposit-template", + "url": "https://github.com/moranegg/deposit-template", + "rel": "/software/repository/github/moranegg/deposit-template", + "avatar": "https://avatars.githubusercontent.com/u/6273005?v=4", + "description": "This is a deposit template repository to help researchers in starting their project in a online VCS", + "topics": [] + }, + { + "uid": "github/moranegg/AffectationRO", + "url": "https://github.com/moranegg/AffectationRO", + "rel": "/software/repository/github/moranegg/AffectationRO", + "avatar": "https://avatars.githubusercontent.com/u/6273005?v=4", + "description": "Projet en recherche op\u00e9rationelle ", "topics": [ - "condensed-matter-physics", - "julia", - "julia-language", - "julia-package", - "julialang", - "chernnumbers", - "z2numbers" + "operational-research", + "glpk" ] }, { - "uid": "github/jdiasn/lidarSuit", - "url": "https://github.com/jdiasn/lidarSuit", - "rel": "/software/repository/github/jdiasn/lidarSuit", - "avatar": "https://avatars.githubusercontent.com/u/11823854?v=4", - "description": "Archived. Please check https://github.com/jdiasn/lidarwind", + "uid": "github/SolavLab/DuoDIC", + "url": "https://github.com/SolavLab/DuoDIC", + "rel": "/software/repository/github/SolavLab/DuoDIC", + "avatar": "https://avatars.githubusercontent.com/u/95631074?v=4", + "description": "Stereo 3D Digital Image Correlation (3D-DIC) MATLAB toolbox", "topics": [] }, { - "uid": "github/DistrictDataLabs/yellowbrick", - "url": "https://github.com/DistrictDataLabs/yellowbrick", - "rel": "/software/repository/github/DistrictDataLabs/yellowbrick", - "avatar": "https://avatars2.githubusercontent.com/u/7107115?v=4", - "description": "Visual analysis and diagnostic tools to facilitate machine learning model selection.", + "uid": "github/stevengiacalone/triceratops", + "url": "https://github.com/stevengiacalone/triceratops", + "rel": "/software/repository/github/stevengiacalone/triceratops", + "avatar": "https://avatars.githubusercontent.com/u/35981550?v=4", + "description": "Tool for Rating Interesting Candidate Exoplanets and Reliability Analysis of Transits Originating from Proximate Stars", "topics": [ - "machine-learning", - "visual-analysis", - "model-selection", - "visualization", - "scikit-learn", - "visualizer", - "matplotlib", - "python", - "estimator", - "anaconda" + "astronomy", + "astrophysics", + "astrophysical-signals", + "exoplanets", + "exoplanet-transits", + "statistical-analysis" ] }, { - "uid": "github/jluastro/PopSyCLE", - "url": "https://github.com/jluastro/PopSyCLE", - "rel": "/software/repository/github/jluastro/PopSyCLE", - "avatar": "https://avatars.githubusercontent.com/u/1459392?v=4", - "description": "Population Synthesis for Compact-object Lensing Events", + "uid": "github/JelfsMaterialsGroup/stk", + "url": "https://github.com/JelfsMaterialsGroup/stk", + "rel": "/software/repository/github/JelfsMaterialsGroup/stk", + "avatar": "https://avatars.githubusercontent.com/u/36706109?v=4", + "description": "Mirror of lukasturcani/stk - please file issues / fork / star that repo. ", "topics": [] }, { - "uid": "github/jonas-fuchs/varVAMP", - "url": "https://github.com/jonas-fuchs/varVAMP", - "rel": "/software/repository/github/jonas-fuchs/varVAMP", - "avatar": "https://avatars.githubusercontent.com/u/78491186?v=4", - "description": "Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.", + "uid": "github/CmPA/iPic3D", + "url": "https://github.com/CmPA/iPic3D", + "rel": "/software/repository/github/CmPA/iPic3D", + "avatar": "https://avatars.githubusercontent.com/u/4458477?v=4", + "description": "Particle-in-Cell code using the implicit moment method", + "topics": [] + }, + { + "uid": "github/mcgalcode/pylattica", + "url": "https://github.com/mcgalcode/pylattica", + "rel": "/software/repository/github/mcgalcode/pylattica", + "avatar": "https://avatars.githubusercontent.com/u/15318848?v=4", + "description": "A simple framework for prototyping lattice evolution simulations e.g. cellular automata, lattice gas simulations, lattice Monte Carlo etc.", "topics": [ - "illumina", - "oxford-nanopore", - "primer", - "primer-design", - "qpcr", - "sanger", - "multiplex-pcr", - "pypi-package", - "virus", - "amplicons", - "ampliconseq", - "sequencing", - "conda", - "consensus-sequences", - "container", - "degenerate-primers", - "easy-to-use", - "pcr", - "python3", - "primer-blast" + "chemistry", + "lattice", + "materials-science", + "simulation" ] }, { - "uid": "github/ABard0/MDGF-MCEC", - "url": "https://github.com/ABard0/MDGF-MCEC", - "rel": "/software/repository/github/ABard0/MDGF-MCEC", - "avatar": "https://avatars.githubusercontent.com/u/39459832?v=4", - "description": null, + "uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", + "url": "https://github.com/ThomasEdwardRiley/xpsi-pre-transfer", + "rel": "/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", + "avatar": "https://avatars.githubusercontent.com/u/25251452?v=4", + "description": "X-PSI: X-ray Pulse Simulation and Inference", "topics": [] }, { - "uid": "github/desihub/fastspecfit", - "url": "https://github.com/desihub/fastspecfit", - "rel": "/software/repository/github/desihub/fastspecfit", - "avatar": "https://avatars.githubusercontent.com/u/9540621?v=4", - "description": "Fast (simple) spectral synthesis and emission-line fitting of DESI spectra.", + "uid": "github/libdynd/dynd-python", + "url": "https://github.com/libdynd/dynd-python", + "rel": "/software/repository/github/libdynd/dynd-python", + "avatar": "https://avatars1.githubusercontent.com/u/10065955?v=4", + "description": "Python exposure of dynd", "topics": [] }, { - "uid": "github/desihub/desitarget", - "url": "https://github.com/desihub/desitarget", - "rel": "/software/repository/github/desihub/desitarget", - "avatar": "https://avatars.githubusercontent.com/u/9540621?v=4", - "description": "DESI Targeting", + "uid": "github/Professor-G/MicroLIA", + "url": "https://github.com/Professor-G/MicroLIA", + "rel": "/software/repository/github/Professor-G/MicroLIA", + "avatar": "https://avatars.githubusercontent.com/u/19847448?v=4", + "description": "Gravitational microlensing classification engine using machine learning.", + "topics": [ + "microlensing", + "detection", + "algorithm", + "random-forest", + "machine-learning" + ] + }, + { + "uid": "github/actris-cloudnet/mwrpy", + "url": "https://github.com/actris-cloudnet/mwrpy", + "rel": "/software/repository/github/actris-cloudnet/mwrpy", + "avatar": "https://avatars.githubusercontent.com/u/52170164?v=4", + "description": "Python package for Microwave Radiometer processing in ACTRIS ", "topics": [] }, { - "uid": "github/bioAI-Oslo/Spikeometric", - "url": "https://github.com/bioAI-Oslo/Spikeometric", - "rel": "/software/repository/github/bioAI-Oslo/Spikeometric", - "avatar": "https://avatars.githubusercontent.com/u/84571881?v=4", - "description": "Spiking Neural Network Simulator based on Generalized Linear Models", + "uid": "github/actris-cloudnet/cloudnetpy", + "url": "https://github.com/actris-cloudnet/cloudnetpy", + "rel": "/software/repository/github/actris-cloudnet/cloudnetpy", + "avatar": "https://avatars3.githubusercontent.com/u/52170164?v=4", + "description": "Python package for Cloudnet data processing ", "topics": [] }, { - "uid": "github/data4goodlab/wgand", - "url": "https://github.com/data4goodlab/wgand", - "rel": "/software/repository/github/data4goodlab/wgand", - "avatar": "https://avatars.githubusercontent.com/u/48566529?v=4", - "description": "Weighted graph anomalous node detection ", + "uid": "github/jo276/EvapMass", + "url": "https://github.com/jo276/EvapMass", + "rel": "/software/repository/github/jo276/EvapMass", + "avatar": "https://avatars.githubusercontent.com/u/1316165?v=4", + "description": null, "topics": [] }, { - "uid": "github/zizroc/villager", - "url": "https://github.com/zizroc/villager", - "rel": "/software/repository/github/zizroc/villager", - "avatar": "https://avatars.githubusercontent.com/u/38635903?v=4", - "description": "villager is an extensible agent based modeling (ABM) framework for the R language. It supports agents, agent aggregations and their associated resources, as well as flexible data management.", - "topics": [ - "simulation", - "abm", - "agent-based-modeling" - ] + "uid": "github/medema-group/bigslice", + "url": "https://github.com/medema-group/bigslice", + "rel": "/software/repository/github/medema-group/bigslice", + "avatar": "https://avatars0.githubusercontent.com/u/60616973?v=4", + "description": "A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data", + "topics": [] }, { - "uid": "github/DenaJGibbon/gibbonNetR", - "url": "https://github.com/DenaJGibbon/gibbonNetR", - "rel": "/software/repository/github/DenaJGibbon/gibbonNetR", - "avatar": "https://avatars.githubusercontent.com/u/26265144?v=4", - "description": "R package to use 'torch for R' for automated detection using convolutional neural nets in passive acoustic monitoring (PAM) data", + "uid": "github/bhhua/vacuumtunneling", + "url": "https://github.com/bhhua/VacuumTunneling", + "rel": "/software/repository/github/bhhua/vacuumtunneling", + "avatar": "https://avatars.githubusercontent.com/u/188728846?v=4", + "description": "A package for evaluating bubble profile with a renomalization factor", "topics": [] }, { - "uid": "github/khyox/recentrifuge", - "url": "https://github.com/khyox/recentrifuge", - "rel": "/software/repository/github/khyox/recentrifuge", - "avatar": "https://avatars.githubusercontent.com/u/4109713?v=4", - "description": "Recentrifuge: robust comparative analysis and contamination removal for metagenomics", + "uid": "github/getzlab/rnaseqc", + "url": "https://github.com/getzlab/rnaseqc", + "rel": "/software/repository/github/getzlab/rnaseqc", + "avatar": "https://avatars.githubusercontent.com/u/59453338?v=4", + "description": "Fast, efficient RNA-Seq metrics for quality control and process optimization", "topics": [ - "metagenomics", - "low-biomass", - "centrifuge", - "lmat", - "clark", - "kraken", - "comparative-genomics", - "ngs", - "robustness", - "contamination", - "nanopore" + "rnaseq", + "rna-seq", + "bioinformatics" ] }, { - "uid": "github/isakro/shoredate", - "url": "https://github.com/isakro/shoredate", - "rel": "/software/repository/github/isakro/shoredate", - "avatar": "https://avatars.githubusercontent.com/u/36520149?v=4", - "description": "R package for shoreline dating coastal Stone Age sites", + "uid": "github/QuaCaTeam/quaca", + "url": "https://github.com/QuaCaTeam/quaca", + "rel": "/software/repository/github/QuaCaTeam/quaca", + "avatar": "https://avatars.githubusercontent.com/u/65653300?v=4", + "description": "QuaCa is an open-source library which provides fast calculations of nonequilibrium atom-surface interactions.", "topics": [ - "archaeology", - "relative-sea-level-change", - "shoreline-dating", - "south-eastern-norway" + "physics", + "fluctuations", + "integration", + "casimir", + "quantum" ] }, { - "uid": "github/travisseymour/EPICpy", - "url": "https://github.com/travisseymour/EPICpy", - "rel": "/software/repository/github/travisseymour/EPICpy", - "avatar": "https://avatars.githubusercontent.com/u/1205358?v=4", - "description": "Cross Platform Python Interface for EPIC modeling using C++ EPIClib backend", + "uid": "github/cylammarco/ASPIRED", + "url": "https://github.com/cylammarco/ASPIRED", + "rel": "/software/repository/github/cylammarco/ASPIRED", + "avatar": "https://avatars.githubusercontent.com/u/2545839?v=4", + "description": "Automated SpectroPhotometric Image REDuction (ASPIRED)", + "topics": [ + "spectroscopy", + "astronomy", + "astrophysics", + "data-reduction", + "calibration", + "spectrophotometry" + ] + }, + { + "uid": "github/cylammarco/WDPhotTools", + "url": "https://github.com/cylammarco/WDPhotTools", + "rel": "/software/repository/github/cylammarco/WDPhotTools", + "avatar": "https://avatars.githubusercontent.com/u/2545839?v=4", + "description": "The Python White Dwarf Photometric SED Fitter and Luminosity Function Builder", "topics": [] }, { - "uid": "github/aadya940/chainopy", - "url": "https://github.com/aadya940/chainopy", - "rel": "/software/repository/github/aadya940/chainopy", - "avatar": "https://avatars.githubusercontent.com/u/77720426?v=4", - "description": "ChainoPy: A Python Library for Discrete Time Markov Chain based stochastic analysis", + "uid": "github/pangeo-data/climpred", + "url": "https://github.com/pangeo-data/climpred", + "rel": "/software/repository/github/pangeo-data/climpred", + "avatar": "https://avatars.githubusercontent.com/u/23299451?v=4", + "description": ":earth_americas: Verification of weather and climate forecasts. :earth_africa:", "topics": [ - "bayesian-data-analysis", - "bayesian-inference", - "bayesian-statistics", - "data-analysis", - "deep-learning", - "forecasting", - "machine-learning", - "markov-chain", - "markov-model", - "markov-process", - "time-series", - "time-series-analysis", - "data-science" + "python", + "climate", + "climate-analysis", + "prediction", + "xarray", + "dask", + "pangeo" ] }, { - "uid": "github/RealTimeGenomics/rtg-tools", - "url": "https://github.com/RealTimeGenomics/rtg-tools", - "rel": "/software/repository/github/RealTimeGenomics/rtg-tools", - "avatar": "https://avatars.githubusercontent.com/u/10228299?v=4", - "description": "RTG Tools: Utilities for accurate VCF comparison and manipulation", - "topics": [] + "uid": "github/lucabaldini/ixpeobssim", + "url": "https://github.com/lucabaldini/ixpeobssim", + "rel": "/software/repository/github/lucabaldini/ixpeobssim", + "avatar": "https://avatars.githubusercontent.com/u/8972541?v=4", + "description": "Simulation and analysis framework for the Imaging X-ray Polarimetry Explorer", + "topics": [ + "astronomy", + "polarimetry", + "python", + "x-ray", + "ixpe" + ] }, { - "uid": "github/zooniverse/starpy", - "url": "https://github.com/zooniverse/starpy", - "rel": "/software/repository/github/zooniverse/starpy", - "avatar": "https://avatars.githubusercontent.com/u/106856?v=4", - "description": "Code to determine sfh parameters of galaxy populations with emcee", + "uid": "github/SchmollerLab/Cell_ACDC", + "url": "https://github.com/SchmollerLab/Cell_ACDC", + "rel": "/software/repository/github/SchmollerLab/Cell_ACDC", + "avatar": "https://avatars.githubusercontent.com/u/79653821?v=4", + "description": "A Python GUI-based framework for segmentation, tracking and cell cycle annotations of micrscopy data", "topics": [] }, { - "uid": "github/Teichlab/bin2cell", - "url": "https://github.com/Teichlab/bin2cell", - "rel": "/software/repository/github/Teichlab/bin2cell", - "avatar": "https://avatars.githubusercontent.com/u/13640351?v=4", - "description": "Join subcellular Visium HD bins into cells", + "uid": "github/ariedel/lacewing", + "url": "https://github.com/ariedel/lacewing", + "rel": "/software/repository/github/ariedel/lacewing", + "avatar": "https://avatars.githubusercontent.com/u/2412871?v=4", + "description": "Repository for the LACEwING moving group identification code (Riedel et al. 2017)", "topics": [] }, { - "uid": "github/MeasureTransport/MParT", - "url": "https://github.com/MeasureTransport/MParT", - "rel": "/software/repository/github/MeasureTransport/MParT", - "avatar": "https://avatars.githubusercontent.com/u/97112235?v=4", - "description": "Monotone Parameterization Toolkit (MParT): A core library for constructing and using transport maps.", + "uid": "github/cajohare/NeutrinoFog", + "url": "https://github.com/cajohare/NeutrinoFog", + "rel": "/software/repository/github/cajohare/NeutrinoFog", + "avatar": "https://avatars.githubusercontent.com/u/43500212?v=4", + "description": "Neutrino fog and floor for direct dark matter searches", "topics": [] }, { - "uid": "github/siriobelli/flame", - "url": "https://github.com/siriobelli/flame", - "rel": "/software/repository/github/siriobelli/flame", - "avatar": "https://avatars.githubusercontent.com/u/19779787?v=4", - "description": "Flame data reduction pipeline", + "uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", + "url": "https://github.com/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", + "rel": "/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", + "avatar": "https://avatars.githubusercontent.com/u/110174507?v=4", + "description": "This is a live homogeneous database of solar active regions (ARs). It's produced by an automatic detection method of AR.", + "topics": [ + "image-processing", + "detection-of-solar-active-regions", + "solar-active-region-database" + ] + }, + { + "uid": "github/phenology/cgc", + "url": "https://github.com/phenology/cgc", + "rel": "/software/repository/github/phenology/cgc", + "avatar": "https://avatars.githubusercontent.com/u/26253666?v=4", + "description": "A clustering tool for geospatial applications", "topics": [] }, { - "uid": "github/FrancesBW/bellamy", - "url": "https://github.com/FrancesBW/bellamy", - "rel": "/software/repository/github/FrancesBW/bellamy", - "avatar": "https://avatars.githubusercontent.com/u/38412724?v=4", + "uid": "github/MarkMageeAstro/Riddler", + "url": "https://github.com/MarkMageeAstro/Riddler", + "rel": "/software/repository/github/MarkMageeAstro/Riddler", + "avatar": "https://avatars.githubusercontent.com/u/53613663?v=4", "description": null, "topics": [] }, { - "uid": "github/antoinemarchal/ROHSA", - "url": "https://github.com/antoinemarchal/ROHSA", - "rel": "/software/repository/github/antoinemarchal/ROHSA", - "avatar": "https://avatars.githubusercontent.com/u/14968256?v=4", - "description": "Regularized Optimization for Hyper-Spectral Analysis", + "uid": "github/oruhnau/when2heat", + "url": "https://github.com/oruhnau/when2heat", + "rel": "/software/repository/github/oruhnau/when2heat", + "avatar": "https://avatars2.githubusercontent.com/u/40352101?v=4", + "description": "Heating Profiles", "topics": [] }, { - "uid": "github/diCenzo-GC/Tn-Core-webserver", - "url": "https://github.com/diCenzo-GC/Tn-Core-webserver", - "rel": "/software/repository/github/diCenzo-GC/Tn-Core-webserver", - "avatar": "https://avatars.githubusercontent.com/u/32292590?v=4", - "description": "Help files and sample data for the Tn-Core webserver. The code supporting the web server is also included.", - "topics": [] + "uid": "github/yangyanli/DO-Conv", + "url": "https://github.com/yangyanli/DO-Conv", + "rel": "/software/repository/github/yangyanli/DO-Conv", + "avatar": "https://avatars.githubusercontent.com/u/2976460?v=4", + "description": "Depthwise Over-parameterized Convolutional Layer", + "topics": [ + "deep-learning", + "convolutional-neural-networks", + "tensorflow", + "pytorch", + "gluoncv" + ] }, { - "uid": "github/OpenDA-Association/OpenDA", - "url": "https://github.com/OpenDA-Association/OpenDA", - "rel": "/software/repository/github/OpenDA-Association/OpenDA", - "avatar": "https://avatars2.githubusercontent.com/u/25099235?v=4", - "description": "Open data assimilation toolbox", + "uid": "github/y-256/libdivsufsort", + "url": "https://github.com/y-256/libdivsufsort", + "rel": "/software/repository/github/y-256/libdivsufsort", + "avatar": "https://avatars.githubusercontent.com/u/2227210?v=4", + "description": "A lightweight suffix-sorting library", "topics": [] }, { - "uid": "github/Fermipy/fermipy", - "url": "https://github.com/fermiPy/fermipy", - "rel": "/software/repository/github/Fermipy/fermipy", - "avatar": "https://avatars.githubusercontent.com/u/10644247?v=4", - "description": "Fermi-LAT Python Analysis Framework", - "topics": [] + "uid": "github/pudeIko/piva", + "url": "https://github.com/pudeIko/piva", + "rel": "/software/repository/github/pudeIko/piva", + "avatar": "https://avatars.githubusercontent.com/u/37271202?v=4", + "description": "Interactive tools for the visualization and analysis of multidimensional photoemission data", + "topics": [ + "angle-resolved-photoemission-spectroscopy", + "arpes", + "condensed-matter-physics", + "data-analysis", + "data-visualization", + "experimental-physics", + "gui", + "interactive-visualizations", + "physics", + "pyqt5", + "python", + "quantum-materials", + "synchrotron-based-data", + "xps" + ] }, { - "uid": "github/jacobblum/simDRIFT", - "url": "https://github.com/jacobblum/simDRIFT", - "rel": "/software/repository/github/jacobblum/simDRIFT", - "avatar": "https://avatars.githubusercontent.com/u/77986408?v=4", - "description": "simDRIFT - A software package for massively parallel forward simulation of Pulsed Gradient Spin Echo diffusion weighted MRI experiments on biophysically accurate tissue systems. ", + "uid": "github/nicokurtovic/SIMIO", + "url": "https://github.com/nicokurtovic/SIMIO", + "rel": "/software/repository/github/nicokurtovic/SIMIO", + "avatar": "https://avatars.githubusercontent.com/u/14165171?v=4", + "description": "SIMIO: from SIMulatIons to Observations", "topics": [] }, { - "uid": "github/SAMI-Galaxy-Survey/sami", - "url": "https://github.com/SAMI-Galaxy-Survey/sami", - "rel": "/software/repository/github/SAMI-Galaxy-Survey/sami", - "avatar": "https://avatars.githubusercontent.com/u/64873436?v=4", - "description": "Data reduction pipeline for the SAMI instrument", + "uid": "github/nye17/javelin", + "url": "https://github.com/nye17/javelin", + "rel": "/software/repository/github/nye17/javelin", + "avatar": "https://avatars.githubusercontent.com/u/1127638?v=4", + "description": "JAVELIN is now working under Python 3!", "topics": [] }, { - "uid": "github/marberts/piar", - "url": "https://github.com/marberts/piar", - "rel": "/software/repository/github/marberts/piar", - "avatar": "https://avatars.githubusercontent.com/u/62676717?v=4", - "description": "Price index aggregation in R", + "uid": "github/mrvollger/rustybam", + "url": "https://github.com/mrvollger/rustybam", + "rel": "/software/repository/github/mrvollger/rustybam", + "avatar": "https://avatars.githubusercontent.com/u/6935283?v=4", + "description": "bioinformatics toolkit in rust", "topics": [ - "cran", - "economics", - "r", - "r-package", - "statistics", - "rstats", - "inflation", - "official-statistics" + "bioinformatics", + "genomics" ] }, { - "uid": "github/agombolay/ribose-map", - "url": "https://github.com/agombolay/ribose-map", - "rel": "/software/repository/github/agombolay/ribose-map", - "avatar": "https://avatars.githubusercontent.com/u/13037968?v=4", - "description": null, + "uid": "github/mrvollger/fibertools-rs", + "url": "https://github.com/mrvollger/fibertools-rs", + "rel": "/software/repository/github/mrvollger/fibertools-rs", + "avatar": "https://avatars.githubusercontent.com/u/6935283?v=4", + "description": "Tools for fiberseq data written in rust. ", "topics": [] }, { - "uid": "github/michauhl/RBPBench", - "url": "https://github.com/michauhl/RBPBench", - "rel": "/software/repository/github/michauhl/RBPBench", - "avatar": "https://avatars.githubusercontent.com/u/10600238?v=4", - "description": "Evaluate CLIP-seq and other genomic region data using a comprehensive collection of known RBP binding motifs", + "uid": "github/rdicosmo/parmap", + "url": "https://github.com/rdicosmo/parmap", + "rel": "/software/repository/github/rdicosmo/parmap", + "avatar": "https://avatars.githubusercontent.com/u/687807?v=4", + "description": "Parmap is a minimalistic library allowing to exploit multicore architecture for OCaml programs with minimal modifications.", "topics": [] }, { - "uid": "github/mathworks/Simscape-Medical-Ventilator", - "url": "https://github.com/mathworks/Simscape-Medical-Ventilator", - "rel": "/software/repository/github/mathworks/Simscape-Medical-Ventilator", - "avatar": "https://avatars.githubusercontent.com/u/8590076?v=4", - "description": "Positive-pressure medical ventilator system using Simscape\u2122", + "uid": "github/cagrikymk/JAX-ReaxFF", + "url": "https://github.com/cagrikymk/JAX-ReaxFF", + "rel": "/software/repository/github/cagrikymk/JAX-ReaxFF", + "avatar": "https://avatars.githubusercontent.com/u/15324155?v=4", + "description": "JAX-ReaxFF: A Gradient Based Framework for Extremely Fast Optimization of Reactive Force Fields", "topics": [] }, { - "uid": "github/B-UMMI/chewBBACA", - "url": "https://github.com/B-UMMI/chewBBACA", - "rel": "/software/repository/github/B-UMMI/chewBBACA", - "avatar": "https://avatars.githubusercontent.com/u/8566625?v=4", - "description": "A complete suite for gene-by-gene schema creation and strain identification.", + "uid": "github/devsim/devsim", + "url": "https://github.com/devsim/devsim", + "rel": "/software/repository/github/devsim/devsim", + "avatar": "https://avatars.githubusercontent.com/u/3003034?v=4", + "description": "TCAD Semiconductor Device Simulator", "topics": [ - "wgmlst", - "cgmlst", - "mlst", - "genomics", - "outbreak-detection", - "bacterial-genome-analysis", - "bacterial-strains", - "allele-calling", - "bioinformatics" + "c-plus-plus", + "python", + "semiconductor-physics", + "devsim", + "tcad", + "tcad-device-simulator", + "semiconductor", + "finite-volume", + "pde" ] }, { - "uid": "github/euroargodev/argopy", - "url": "https://github.com/euroargodev/argopy", - "rel": "/software/repository/github/euroargodev/argopy", - "avatar": "https://avatars1.githubusercontent.com/u/57987739?v=4", - "description": "A python library for Argo data beginners and experts", + "uid": "github/spack/spack", + "url": "https://github.com/spack/spack", + "rel": "/software/repository/github/spack/spack", + "avatar": "https://avatars2.githubusercontent.com/u/25539161?v=4", + "description": "A flexible package manager that supports multiple versions, configurations, platforms, and compilers.", "topics": [ - "argo", "python", - "argo-floats", - "oceanography", - "argo-data" + "spack", + "package-manager", + "hpc", + "build-tools", + "radiuss", + "macos", + "scientific-computing", + "linux" ] }, { - "uid": "github/eWaterCycle/Cesium-NcWMS", - "url": "https://github.com/eWaterCycle/Cesium-NcWMS", - "rel": "/software/repository/github/eWaterCycle/Cesium-NcWMS", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "Cesium angular directive with ncwms integration to display netcdf datasets", - "topics": [] + "uid": "github/isakro/shoredate", + "url": "https://github.com/isakro/shoredate", + "rel": "/software/repository/github/isakro/shoredate", + "avatar": "https://avatars.githubusercontent.com/u/36520149?v=4", + "description": "R package for shoreline dating coastal Stone Age sites", + "topics": [ + "archaeology", + "relative-sea-level-change", + "shoreline-dating", + "south-eastern-norway" + ] }, { - "uid": "github/eWaterCycle/eWaterleaf", - "url": "https://github.com/eWaterCycle/eWaterleaf", - "rel": "/software/repository/github/eWaterCycle/eWaterleaf", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "Simple leaflet-based visualization for the eWaterCycle project", - "topics": [] + "uid": "github/HuttleyLab/scitrack", + "url": "https://github.com/HuttleyLab/scitrack", + "rel": "/software/repository/github/HuttleyLab/scitrack", + "avatar": "https://avatars.githubusercontent.com/u/54967899?v=4", + "description": "library aimed at scientists who want a simple tool to help log research computations", + "topics": [ + "logging-library", + "reproducible-research", + "science" + ] }, { - "uid": "github/eWaterCycle/grpc4bmi", - "url": "https://github.com/eWaterCycle/grpc4bmi", - "rel": "/software/repository/github/eWaterCycle/grpc4bmi", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "gRPC wrapper for model with a Basic modeling interface", + "uid": "github/HuttleyLab/DiverseSeq", + "url": "https://github.com/HuttleyLab/DiverseSeq", + "rel": "/software/repository/github/HuttleyLab/DiverseSeq", + "avatar": "https://avatars.githubusercontent.com/u/54967899?v=4", + "description": "Tools for analysis of sequence divergence", "topics": [ - "grpc", - "bmi", - "python" + "bioinformatics", + "phylogenetics" ] }, { - "uid": "github/eWaterCycle/setup-grpc", - "url": "https://github.com/eWaterCycle/setup-grpc", - "rel": "/software/repository/github/eWaterCycle/setup-grpc", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "GitHub Action to setup gRPC C++ environment", + "uid": "github/ratschlab/metagraph", + "url": "https://github.com/ratschlab/metagraph", + "rel": "/software/repository/github/ratschlab/metagraph", + "avatar": "https://avatars.githubusercontent.com/u/1820852?v=4", + "description": "Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly", + "topics": [ + "graph", + "dna", + "alignment", + "metagenomics", + "search", + "assembly" + ] + }, + { + "uid": "github/nlesc-sherlock/Rig", + "url": "https://github.com/nlesc-sherlock/Rig", + "rel": "/software/repository/github/nlesc-sherlock/Rig", + "avatar": "https://avatars1.githubusercontent.com/u/15137410?v=4", + "description": null, "topics": [] }, { - "uid": "github/eWaterCycle/ewatercycle", - "url": "https://github.com/eWaterCycle/ewatercycle", - "rel": "/software/repository/github/eWaterCycle/ewatercycle", - "avatar": "https://avatars.githubusercontent.com/u/12843269?v=4", - "description": "Python utilities for running hydrological models", + "uid": "github/nlesc-sherlock/emma", + "url": "https://github.com/nlesc-sherlock/emma", + "rel": "/software/repository/github/nlesc-sherlock/emma", + "avatar": "https://avatars1.githubusercontent.com/u/15137410?v=4", + "description": "Ansible playbook to create a cluster with GlusterFS, Docker, Spark and JupyterHub services", "topics": [] }, { - "uid": "github/eWaterCycle/setup-singularity", - "url": "https://github.com/eWaterCycle/setup-singularity", - "rel": "/software/repository/github/eWaterCycle/setup-singularity", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "GitHub action to setup singularity", + "uid": "github/FiorenSt/AutoSourceID-Light", + "url": "https://github.com/FiorenSt/AutoSourceID-Light", + "rel": "/software/repository/github/FiorenSt/AutoSourceID-Light", + "avatar": "https://avatars.githubusercontent.com/u/96529703?v=4", + "description": null, "topics": [] }, { - "uid": "github/eWaterCycle/jupyterlab_thredds", - "url": "https://github.com/eWaterCycle/jupyterlab_thredds", - "rel": "/software/repository/github/eWaterCycle/jupyterlab_thredds", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "JupyterLab dataset browser for THREDDS catalog", - "topics": [ - "thredds", - "jupyterlab-extension" - ] + "uid": "github/nboley/idr", + "url": "https://github.com/nboley/idr", + "rel": "/software/repository/github/nboley/idr", + "avatar": "https://avatars.githubusercontent.com/u/831639?v=4", + "description": "IDR ", + "topics": [] }, { - "uid": "github/eWaterCycle/experiment-launcher", - "url": "https://github.com/eWaterCycle/experiment-launcher", - "rel": "/software/repository/github/eWaterCycle/experiment-launcher", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "eWaterCycle Experiment Launcher", + "uid": "github/gmrandazzo/libscientific", + "url": "https://github.com/gmrandazzo/libscientific", + "rel": "/software/repository/github/gmrandazzo/libscientific", + "avatar": "https://avatars.githubusercontent.com/u/3600735?v=4", + "description": "Libscientific is a C framework for multivariate and other statistical analysis", "topics": [] }, { - "uid": "github/MJTemple/qsogen", - "url": "https://github.com/MJTemple/qsogen", - "rel": "/software/repository/github/MJTemple/qsogen", - "avatar": "https://avatars.githubusercontent.com/u/34741764?v=4", - "description": "Model quasar SEDs", + "uid": "github/WGS-TB/MentaLiST", + "url": "https://github.com/WGS-TB/MentaLiST", + "rel": "/software/repository/github/WGS-TB/MentaLiST", + "avatar": "https://avatars.githubusercontent.com/u/19986579?v=4", + "description": "The MLST pipeline developed by the PathOGiST research group", "topics": [] }, { - "uid": "github/mariuzka/pop2net", - "url": "https://github.com/mariuzka/pop2net", - "rel": "/software/repository/github/mariuzka/pop2net", - "avatar": "https://avatars.githubusercontent.com/u/64357369?v=4", - "description": "Pop2net simplifies the creation of network structures for agent-based models.", - "topics": [ - "agent-based-modeling", - "bipartite-graphs", - "network-generator", - "survey-data" - ] + "uid": "github/jranalli/solartoolbox", + "url": "https://github.com/jranalli/solarspatialtools", + "rel": "/software/repository/github/jranalli/solartoolbox", + "avatar": "https://avatars.githubusercontent.com/u/7864460?v=4", + "description": "Library of tools used to support spatial analyses of solar energy", + "topics": [] }, { - "uid": "github/enveda/RPath", - "url": "https://github.com/enveda/RPath", - "rel": "/software/repository/github/enveda/RPath", - "avatar": "https://avatars.githubusercontent.com/u/57016420?v=4", - "description": "Source code and data for \"Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery\"", + "uid": "github/EigenDev/simbi", + "url": "https://github.com/EigenDev/simbi", + "rel": "/software/repository/github/EigenDev/simbi", + "avatar": "https://avatars.githubusercontent.com/u/29236993?v=4", + "description": "SIMBI is a 3D Heterogeneous Relativistic Gas Dynamics Code using the Cython framework to blend together C++, CUDA, HIP, and Python.", + "topics": [] + }, + { + "uid": "github/songlabcodes/MSC", + "url": "https://github.com/songlabcodes/MSC", + "rel": "/software/repository/github/songlabcodes/MSC", + "avatar": "https://avatars.githubusercontent.com/u/141258673?v=4", + "description": "single-cell multiscale clustering repository", + "topics": [] + }, + { + "uid": "github/JCGoran/coffe", + "url": "https://github.com/JCGoran/coffe", + "rel": "/software/repository/github/JCGoran/coffe", + "avatar": "https://avatars.githubusercontent.com/u/25671271?v=4", + "description": "The public repository for the code COFFE", "topics": [ - "knowledge-graph", - "causal-networks", - "drug-discovery", - "mechanism-of-action", - "transcriptomics", - "network-biology" + "cosmology", + "correlation-functions", + "galaxy-clustering", + "covariance-matrix" ] }, { - "uid": "github/gpantel/MolPainter", - "url": "https://github.com/gpantel/MolPainter", - "rel": "/software/repository/github/gpantel/MolPainter", - "avatar": "https://avatars.githubusercontent.com/u/5740723?v=4", - "description": "A Tool for Drawing Complex Planar Molecular Systems of Arbitrary Composition and Placement", + "uid": "github/jdhenshaw/scousepy", + "url": "https://github.com/jdhenshaw/scousepy", + "rel": "/software/repository/github/jdhenshaw/scousepy", + "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", + "description": "ScousePy", "topics": [] }, { - "uid": "github/dgerosa/spops", - "url": "https://github.com/dgerosa/spops", - "rel": "/software/repository/github/dgerosa/spops", - "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", - "description": "Spinning black-hole binary POPulation Synthesis", + "uid": "github/jdhenshaw/acorns", + "url": "https://github.com/jdhenshaw/acorns", + "rel": "/software/repository/github/jdhenshaw/acorns", + "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", + "description": "Agglomerative Clustering for ORganising Nested Structures", "topics": [] }, { - "uid": "github/dgerosa/gwdet", - "url": "https://github.com/dgerosa/gwdet", - "rel": "/software/repository/github/dgerosa/gwdet", - "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", - "description": "Detectability of gravitational-wave signals from compact binary coalescences", + "uid": "github/jdhenshaw/SCOUSE", + "url": "https://github.com/jdhenshaw/SCOUSE", + "rel": "/software/repository/github/jdhenshaw/SCOUSE", + "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", + "description": "Semi-automated multi-COmponent Universal Spectral-line fitting Engine", "topics": [] }, { - "uid": "github/dgerosa/surrkick", - "url": "https://github.com/dgerosa/surrkick", - "rel": "/software/repository/github/dgerosa/surrkick", - "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", - "description": "Black-hole kicks from numerical-relativity surrogate models", + "uid": "github/isaackd/wcloud", + "url": "https://github.com/isaackd/wcloud", + "rel": "/software/repository/github/isaackd/wcloud", + "avatar": "https://avatars.githubusercontent.com/u/24992665?v=4", + "description": "Create word clouds", "topics": [] }, { - "uid": "github/MikkelSchubert/adapterremoval", - "url": "https://github.com/MikkelSchubert/adapterremoval", - "rel": "/software/repository/github/MikkelSchubert/adapterremoval", - "avatar": "https://avatars.githubusercontent.com/u/2411627?v=4", - "description": "AdapterRemoval v2 - rapid adapter trimming, identification, and read merging", + "uid": "github/wlloyduw/ContainerProfiler", + "url": "https://github.com/wlloyduw/ContainerProfiler", + "rel": "/software/repository/github/wlloyduw/ContainerProfiler", + "avatar": "https://avatars.githubusercontent.com/u/25626906?v=4", + "description": null, "topics": [] }, { - "uid": "github/PengyiZhang/DRR4Covid", - "url": "https://github.com/PengyiZhang/DRR4Covid", - "rel": "/software/repository/github/PengyiZhang/DRR4Covid", - "avatar": "https://avatars.githubusercontent.com/u/53178862?v=4", - "description": "DRR4Covid: Learning Automated COVID-19 Infection Segmentation from Digitally Reconstructed Radiographs", + "uid": "github/SynthSys/pyOmeroUpload", + "url": "https://github.com/SynthSys/pyOmeroUpload", + "rel": "/software/repository/github/SynthSys/pyOmeroUpload", + "avatar": "https://avatars.githubusercontent.com/u/13380219?v=4", + "description": "Project for uploading local file structure into OMERO database", "topics": [] }, { - "uid": "github/thieu1995/permetrics", - "url": "https://github.com/thieu1995/permetrics", - "rel": "/software/repository/github/thieu1995/permetrics", - "avatar": "https://avatars.githubusercontent.com/u/12763861?v=4", - "description": "Artificial intelligence (AI, ML, DL) performance metrics implemented in Python", - "topics": [ - "coefficient-of-determination", - "rmse", - "mae", - "performance-metrics", - "symmetric-mean-absolute-percentage", - "nash-sutcliffe-efficiency", - "willmott-index", - "relative-error", - "regression-methods", - "classification-report", - "clustering-evaluation", - "kling-gupta-efficiency", - "deviation-of-runoff-volume", - "evaluation-metrics", - "regression", - "classification" - ] + "uid": "github/DeltaRCM/pyDeltaRCM", + "url": "https://github.com/DeltaRCM/pyDeltaRCM", + "rel": "/software/repository/github/DeltaRCM/pyDeltaRCM", + "avatar": "https://avatars.githubusercontent.com/u/45898483?v=4", + "description": "Delta model with a reduced-complexity approach", + "topics": [] }, { - "uid": "github/barricklab/seabreeze", - "url": "https://github.com/barricklab/seabreeze", - "rel": "/software/repository/github/barricklab/seabreeze", - "avatar": "https://avatars.githubusercontent.com/u/11457754?v=4", - "description": "seabreeze: A Pipeline for Analyzing Structural Variation Between Bacterial Genome Assemblies", + "uid": "github/wangbingjie/sbi_pp", + "url": "https://github.com/wangbingjie/sbi_pp", + "rel": "/software/repository/github/wangbingjie/sbi_pp", + "avatar": "https://avatars.githubusercontent.com/u/12805735?v=4", + "description": "Simulation-based (likelihood-free) inference customized for astronomical applications", "topics": [ - "bioinformatics-pipeline", - "experimental-evolution", - "long-read-sequencing", - "structural-variation" + "sed-fitting", + "simulation-based-inference" ] }, { - "uid": "github/barricklab/pLannotate", - "url": "https://github.com/barricklab/pLannotate", - "rel": "/software/repository/github/barricklab/pLannotate", - "avatar": "https://avatars.githubusercontent.com/u/11457754?v=4", - "description": "Webserver and command line tool for annotating engineered plasmids", - "topics": [ - "plasmid-annotation", - "webserver" - ] + "uid": "github/m-d-grunnill/MetaCast", + "url": "https://github.com/m-d-grunnill/MetaCast", + "rel": "/software/repository/github/m-d-grunnill/MetaCast", + "avatar": "https://avatars.githubusercontent.com/u/47453723?v=4", + "description": "A package for broadcasting epidimiological and ecological models over metapopulations.", + "topics": [] }, { - "uid": "github/RichardObi/medigan", - "url": "https://github.com/RichardObi/medigan", - "rel": "/software/repository/github/RichardObi/medigan", - "avatar": "https://avatars.githubusercontent.com/u/47958412?v=4", - "description": "medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis", - "topics": [ - "medical", - "generation", - "gans", - "toolbox", - "python", - "deep-learning", - "machine-learning", - "model", - "computer-vision", - "dataset", - "endoscopy", - "generative-adversarial-network", - "generative-ai", - "generative-model", - "medical-image-analysis", - "medical-image-dataset", - "medical-imaging", - "radiology", - "synthesis", - "synthetic-data" - ] + "uid": "github/JuliaQX/QXTools.jl", + "url": "https://github.com/JuliaQX/QXTools.jl", + "rel": "/software/repository/github/JuliaQX/QXTools.jl", + "avatar": "https://avatars.githubusercontent.com/u/77590457?v=4", + "description": "Julia package for quantum circuit simulation using tensor networks", + "topics": [] }, { - "uid": "github/zhangzzk/forklens", - "url": "https://github.com/zhangzzk/forklens", - "rel": "/software/repository/github/zhangzzk/forklens", - "avatar": "https://avatars.githubusercontent.com/u/31132161?v=4", - "description": "DL weak lensing shear", + "uid": "github/holmescao/ANTS_marking_and_analysis_tools", + "url": "https://github.com/holmescao/ANTS_marking_and_analysis_tools", + "rel": "/software/repository/github/holmescao/ANTS_marking_and_analysis_tools", + "avatar": "https://avatars.githubusercontent.com/u/80808710?v=4", + "description": null, "topics": [] }, { - "uid": "github/pontoppi/radlite", - "url": "https://github.com/pontoppi/radlite", - "rel": "/software/repository/github/pontoppi/radlite", - "avatar": "https://avatars.githubusercontent.com/u/3697922?v=4", - "description": "RADLite is the fast 2D/3D raytracer for infrared lines", + "uid": "github/PSims/BayesEoR", + "url": "https://github.com/PSims/BayesEoR", + "rel": "/software/repository/github/PSims/BayesEoR", + "avatar": "https://avatars.githubusercontent.com/u/6097708?v=4", + "description": "Code to estimate the power spectrum of redshifted 21-cm emission from interferometric observations, within a Bayesian forward modelling framework.", "topics": [] }, { - "uid": "github/pontoppi/ctool", - "url": "https://github.com/pontoppi/ctool", - "rel": "/software/repository/github/pontoppi/ctool", - "avatar": "https://avatars.githubusercontent.com/u/3697922?v=4", + "uid": "github/molscat/molscat", + "url": "https://github.com/molscat/molscat", + "rel": "/software/repository/github/molscat/molscat", + "avatar": "https://avatars.githubusercontent.com/u/44835777?v=4", "description": null, "topics": [] }, { - "uid": "github/qqpigass/FREEPII", - "url": "https://github.com/qqpigass/FREEPII", - "rel": "/software/repository/github/qqpigass/FREEPII", - "avatar": "https://avatars.githubusercontent.com/u/68411347?v=4", - "description": "Source code for FREEPII", + "uid": "github/mberto79/XCALibre.jl", + "url": "https://github.com/mberto79/XCALibre.jl", + "rel": "/software/repository/github/mberto79/XCALibre.jl", + "avatar": "https://avatars.githubusercontent.com/u/61561260?v=4", + "description": null, "topics": [] }, { - "uid": "github/febos/SQUARNA", - "url": "https://github.com/febos/SQUARNA", - "rel": "/software/repository/github/febos/SQUARNA", - "avatar": "https://avatars.githubusercontent.com/u/1099991?v=4", - "description": "RNA secondary structure prediction tool", + "uid": "github/neuroanatomy/thresholdmann", + "url": "https://github.com/neuroanatomy/thresholdmann", + "rel": "/software/repository/github/neuroanatomy/thresholdmann", + "avatar": "https://avatars.githubusercontent.com/u/11254134?v=4", + "description": "A tool to apply a smoothly varying threshold to a nifti image", "topics": [ - "bioinformatics", - "bioinformatics-tool", - "biological-data-analysis", - "biology", - "prediction", - "prediction-algorithm", - "rna", - "rna-secondary-structure", - "rna-secondary-structure-prediction", - "rna-structure", - "rna-structure-prediction", - "secondary-structure", - "secondary-structure-prediction", - "structural-biology", - "structure", - "structure-prediction", - "alignment", - "single-sequence", - "2d", - "pseudoknot" + "hacktoberfest" ] }, { - "uid": "github/monarch-initiative/loinc2hpo", - "url": "https://github.com/monarch-initiative/loinc2hpo", - "rel": "/software/repository/github/monarch-initiative/loinc2hpo", - "avatar": "https://avatars1.githubusercontent.com/u/5161984?v=4", - "description": "Java library to map LOINC-encoded test results to Human Phenotype Ontology", - "topics": [] + "uid": "github/neuroanatomy/reorient", + "url": "https://github.com/neuroanatomy/reorient", + "rel": "/software/repository/github/neuroanatomy/reorient", + "avatar": "https://avatars1.githubusercontent.com/u/11254134?v=4", + "description": "A tool for reorienting and cropping MRI data", + "topics": [ + "hacktoberfest" + ] }, { - "uid": "github/kieranatkins/gimp-image-annotator", - "url": "https://github.com/kieranatkins/gimp-image-annotator", - "rel": "/software/repository/github/kieranatkins/gimp-image-annotator", - "avatar": "https://avatars.githubusercontent.com/u/22368431?v=4", - "description": "A GIMP plug-in to allow for direct generation of semantic segementation masks for use in machine learning projects, using the power of the GIMP selection tools.", + "uid": "github/hanyk/BayeSED3", + "url": "https://github.com/hanyk/BayeSED3", + "rel": "/software/repository/github/hanyk/BayeSED3", + "avatar": "https://avatars.githubusercontent.com/u/7869600?v=4", + "description": "A code for Bayesian SED synthesis and analysis of galaxies and AGNs", "topics": [] }, { - "uid": "github/kieranatkins/silique-detector", - "url": "https://github.com/kieranatkins/silique-detector", - "rel": "/software/repository/github/kieranatkins/silique-detector", - "avatar": "https://avatars.githubusercontent.com/u/22368431?v=4", - "description": "Model weights, inference code and phenotyping code associated with the paper \"Deep Learning Phenotyping of Arabidopsis Fruits with QTL Analysis Verification\" by Atkins et al.", + "uid": "github/sidmohite/nimbus-astro", + "url": "https://github.com/sidmohite/nimbus-astro", + "rel": "/software/repository/github/sidmohite/nimbus-astro", + "avatar": "https://avatars.githubusercontent.com/u/43979903?v=4", + "description": "A Bayesian inference framework to constrain kilonova models.", "topics": [] }, { - "uid": "github/bacpop/PopPUNK", - "url": "https://github.com/bacpop/PopPUNK", - "rel": "/software/repository/github/bacpop/PopPUNK", - "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", - "description": "PopPUNK \ud83d\udc68\u200d\ud83c\udfa4 (POPulation Partitioning Using Nucleotide Kmers)", - "topics": [ - "bacteria", - "genomics", - "population-genetics", - "k-mer", - "sketching" - ] - }, - { - "uid": "github/bacpop/ska.rust", - "url": "https://github.com/bacpop/ska.rust", - "rel": "/software/repository/github/bacpop/ska.rust", - "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", - "description": "Split k-mer analysis \u2013 version 2", + "uid": "github/Wimmics/olivaw", + "url": "https://github.com/Wimmics/olivaw", + "rel": "/software/repository/github/Wimmics/olivaw", + "avatar": "https://avatars.githubusercontent.com/u/12628018?v=4", + "description": "Python framework for Agile ontology development support to be used with command lines with pre-commit or GitHub Actions", "topics": [ - "bioinformatics", - "sequence", - "ska", - "rust", - "alignment", - "k-mer" + "ontology", + "semantics", + "linked-data", + "owl", + "rdf", + "rdfs", + "schema", + "shacl", + "sparql", + "validation", + "vocabulary" ] }, { - "uid": "github/FrdCHK/serial-MultiView", - "url": "https://github.com/FrdCHK/serial-MultiView", - "rel": "/software/repository/github/FrdCHK/serial-MultiView", - "avatar": "https://avatars.githubusercontent.com/u/43998364?v=4", - "description": "Python scripts for serial-MultiView developed by Jingdong Zhang, Shanghai Astronomical Observatory, June 2024.", + "uid": "github/dcorre/otrain", + "url": "https://github.com/dcorre/otrain", + "rel": "/software/repository/github/dcorre/otrain", + "avatar": "https://avatars.githubusercontent.com/u/18632113?v=4", + "description": null, "topics": [] }, { - "uid": "github/koszullab/pareidolia", - "url": "https://github.com/koszullab/pareidolia", - "rel": "/software/repository/github/koszullab/pareidolia", - "avatar": "https://avatars.githubusercontent.com/u/9391430?v=4", - "description": "Multi-sample change detection in Hi-C patterns", + "uid": "github/AlanRace/imzMLConverter", + "url": "https://github.com/AlanRace/imzMLConverter", + "rel": "/software/repository/github/AlanRace/imzMLConverter", + "avatar": "https://avatars.githubusercontent.com/u/1210117?v=4", + "description": "Tool for converting mass spectrometry data to the imzML format.", "topics": [ - "genomics", - "hi-c", - "change-detection" + "imzml", + "converter", + "mass-spectrometry-imaging", + "converting-data" ] }, { - "uid": "github/astroml/gatspy", - "url": "https://github.com/astroML/gatspy", - "rel": "/software/repository/github/astroml/gatspy", - "avatar": "https://avatars.githubusercontent.com/u/1971246?v=4", - "description": "General tools for Astronomical Time Series in Python", - "topics": [] - }, - { - "uid": "github/mbursa/sim5", - "url": "https://github.com/mbursa/sim5", - "rel": "/software/repository/github/mbursa/sim5", - "avatar": "https://avatars.githubusercontent.com/u/10572860?v=4", - "description": "Library for ray-tracing and radiation transport in general relativity", - "topics": [] + "uid": "github/transientskp/pyse", + "url": "https://github.com/transientskp/pyse", + "rel": "/software/repository/github/transientskp/pyse", + "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", + "description": "Python Source Extractor", + "topics": [ + "radioastronomy", + "science", + "sourcefinder", + "transients", + "python", + "astronomy" + ] }, { - "uid": "github/mbursa/disk-models", - "url": "https://github.com/mbursa/disk-models", - "rel": "/software/repository/github/mbursa/disk-models", - "avatar": "https://avatars.githubusercontent.com/u/10572860?v=4", - "description": "Accretion disk radial structure models", + "uid": "github/transientskp/lpf", + "url": "https://github.com/transientskp/lpf", + "rel": "/software/repository/github/transientskp/lpf", + "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", + "description": null, "topics": [] }, { - "uid": "github/21cmfast/21cmEMU", - "url": "https://github.com/21cmfast/21cmEMU", - "rel": "/software/repository/github/21cmfast/21cmEMU", - "avatar": "https://avatars.githubusercontent.com/u/51762336?v=4", - "description": "An emulator of 21cmFAST summaries.", + "uid": "github/transientskp/tkp", + "url": "https://github.com/transientskp/tkp", + "rel": "/software/repository/github/transientskp/tkp", + "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", + "description": "A transients-discovery pipeline for astronomical image-based surveys", "topics": [] }, { - "uid": "github/GOVS-pack/GOVS", - "url": "https://github.com/GOVS-pack/GOVS", - "rel": "/software/repository/github/GOVS-pack/GOVS", - "avatar": "https://avatars.githubusercontent.com/u/85439946?v=4", - "description": "Genome optimization via virtual simulation", + "uid": "github/sonjageorgievska/CClusTera", + "url": "https://github.com/sonjageorgievska/CClusTera", + "rel": "/software/repository/github/sonjageorgievska/CClusTera", + "avatar": "https://avatars0.githubusercontent.com/u/12493538?v=4", + "description": "A javascript library for interactive hierarchical visualization of 3D points (suitable for large hierarchical datasets) . Based on graphosaurus.js (https://github.com/frewsxcv/graphosaurus), which runs on Three.js. ", "topics": [] }, { - "uid": "github/FlowModelingControl/flowtorch", - "url": "https://github.com/FlowModelingControl/flowtorch", - "rel": "/software/repository/github/FlowModelingControl/flowtorch", - "avatar": "https://avatars.githubusercontent.com/u/89638677?v=4", - "description": "flowTorch - a Python library for analysis and reduced-order modeling of fluid flows", + "uid": "github/Sudaraka88/LDWeaver", + "url": "https://github.com/Sudaraka88/LDWeaver", + "rel": "/software/repository/github/Sudaraka88/LDWeaver", + "avatar": "https://avatars.githubusercontent.com/u/52267971?v=4", + "description": "Genomewide Epistasis Analysis on Bacteria", "topics": [ - "machine-learning", - "dynamic-mode-decomposition", - "proper-orthogonal-decomposition", - "pytorch", - "jupyter", - "openfoam", - "netcdf", - "tau", - "davis", - "csv", - "hdf5", - "ipsp", - "dmd", - "pod", - "cnm" + "bioinformatics", + "bacterial-genome-analysis", + "epistasis-analysis", + "linkage-disequilibrium", + "microbial-genomics" ] }, { - "uid": "github/nppackages/lpcde", - "url": "https://github.com/nppackages/lpcde", - "rel": "/software/repository/github/nppackages/lpcde", - "avatar": "https://avatars.githubusercontent.com/u/69351622?v=4", - "description": " R implementation of bandwidth selection, point estimation and inference procedures for local polynomial conditional distribution and density methods.", + "uid": "github/achaikova/frbmclust", + "url": "https://github.com/achaikova/frbmclust", + "rel": "/software/repository/github/achaikova/frbmclust", + "avatar": "https://avatars.githubusercontent.com/u/57727520?v=4", + "description": null, "topics": [] }, { - "uid": "github/lionandjelka/QhX1", - "url": "https://github.com/lionandjelka/QhX1", - "rel": "/software/repository/github/lionandjelka/QhX1", - "avatar": "https://avatars.githubusercontent.com/u/7264975?v=4", - "description": "QhX-Quasar harmonics eXplorer- Python package for detecting oscillations in red noise", + "uid": "github/cran/irtplay", + "url": "https://github.com/cran/irtplay", + "rel": "/software/repository/github/cran/irtplay", + "avatar": "https://avatars.githubusercontent.com/u/6899542?v=4", + "description": ":exclamation:\u00a0This\u00a0is\u00a0a\u00a0read-only\u00a0mirror\u00a0of\u00a0the\u00a0CRAN\u00a0R\u00a0package\u00a0repository. irtplay\u00a0\u2014\u00a0Unidimensional\u00a0Item\u00a0Response\u00a0Theory\u00a0Modeling.\u00a0Homepage:\u00a0https://github.com/hwangQ/irtplay Report\u00a0bugs\u00a0for\u00a0this\u00a0package:\u00a0https://github.com/hwangQ/irtplay/issues", "topics": [] }, { - "uid": "github/WatsonLab/MAGpy", - "url": "https://github.com/WatsonLab/MAGpy", - "rel": "/software/repository/github/WatsonLab/MAGpy", - "avatar": "https://avatars.githubusercontent.com/u/29977047?v=4", - "description": "Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)", - "topics": [] + "uid": "github/SGpp/DisCoTec", + "url": "https://github.com/SGpp/DisCoTec", + "rel": "/software/repository/github/SGpp/DisCoTec", + "avatar": "https://avatars.githubusercontent.com/u/37072529?v=4", + "description": "MPI-based code for distributed HPC simulations with the sparse grid combination technique. Docs->(https://discotec.readthedocs.io/)", + "topics": [ + "higher-dimensional", + "multi-scale", + "simulation", + "sparse-grids", + "vlasov-solver", + "combination-technique" + ] }, { - "uid": "github/DragonflyTelescope/dfreproject", - "url": "https://github.com/DragonflyTelescope/dfreproject", - "rel": "/software/repository/github/DragonflyTelescope/dfreproject", - "avatar": "https://avatars.githubusercontent.com/u/92650601?v=4", - "description": "homegrown reprojection algorithm using torch", + "uid": "github/mjcarley/nbi", + "url": "https://github.com/mjcarley/nbi", + "rel": "/software/repository/github/mjcarley/nbi", + "avatar": "https://avatars.githubusercontent.com/u/36204194?v=4", + "description": "Nystrom Boundary Integral codes for Laplace and Helmholtz problems", "topics": [] }, { - "uid": "github/fcastagna/preprofit", - "url": "https://github.com/fcastagna/preprofit", - "rel": "/software/repository/github/fcastagna/preprofit", - "avatar": "https://avatars.githubusercontent.com/u/44572424?v=4", - "description": "Pressure Profile Fitter for galaxy clusters in Python", - "topics": [ - "python", - "galaxy-clusters", - "pressure-profile", - "bayesian" - ] + "uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", + "url": "https://github.com/leonidprinceton/LightweightSpaceCoronagraphSimulator", + "rel": "/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", + "avatar": "https://avatars.githubusercontent.com/u/35080336?v=4", + "description": "Simulating realistic high-contrast space imaging instruments in their linear regime", + "topics": [] }, { - "uid": "github/fcastagna/JoXSZ", - "url": "https://github.com/fcastagna/JoXSZ", - "rel": "/software/repository/github/fcastagna/JoXSZ", - "avatar": "https://avatars.githubusercontent.com/u/44572424?v=4", - "description": "Joint X-ray and SZ data fitting code for galaxy clusters in Python", + "uid": "github/rbturnbull/ausdex", + "url": "https://github.com/rbturnbull/ausdex", + "rel": "/software/repository/github/rbturnbull/ausdex", + "avatar": "https://avatars.githubusercontent.com/u/43091272?v=4", + "description": "A Python package for adjusting Australian dollars for inflation", "topics": [ - "python", - "astrostatistics", - "mcmc", - "galaxy-clusters" + "inflation", + "australia" ] }, { - "uid": "github/JeffLCoughlin/EphemMatch", - "url": "https://github.com/JeffLCoughlin/EphemMatch", - "rel": "/software/repository/github/JeffLCoughlin/EphemMatch", - "avatar": "https://avatars.githubusercontent.com/u/11861045?v=4", - "description": "Code to do ephemeris matching of DR25 TCEs, KOIs, and EBs for false positive identificaiton.", + "uid": "github/Nic5472K/ScientificData2021_HealthGym", + "url": "https://github.com/Nic5472K/ScientificData2021_HealthGym", + "rel": "/software/repository/github/Nic5472K/ScientificData2021_HealthGym", + "avatar": "https://avatars.githubusercontent.com/u/32753860?v=4", + "description": null, "topics": [] }, { - "uid": "github/JeffLCoughlin/skye", - "url": "https://github.com/JeffLCoughlin/skye", - "rel": "/software/repository/github/JeffLCoughlin/skye", - "avatar": "https://avatars.githubusercontent.com/u/11861045?v=4", - "description": "The Kepler DR25 Skye Test", + "uid": "github/lastz/lastz", + "url": "https://github.com/lastz/lastz", + "rel": "/software/repository/github/lastz/lastz", + "avatar": "https://avatars.githubusercontent.com/u/20935716?v=4", + "description": "Program for aligning DNA sequences, a pairwise aligner.", "topics": [] }, { - "uid": "github/LuShenJ/PyEMILI", - "url": "https://github.com/LuShenJ/PyEMILI", - "rel": "/software/repository/github/LuShenJ/PyEMILI", - "avatar": "https://avatars.githubusercontent.com/u/56467275?v=4", - "description": "Spectral line identification tool", + "uid": "github/singularityhub/singularity-hpc", + "url": "https://github.com/singularityhub/singularity-hpc", + "rel": "/software/repository/github/singularityhub/singularity-hpc", + "avatar": "https://avatars.githubusercontent.com/u/24552884?v=4", + "description": "Local filesystem registry for containers (intended for HPC) using Lmod or Environement Modules. Works for users and admins.", "topics": [ - "line-identification" + "singularity", + "hpc", + "lmod", + "containers", + "reproducibility" ] }, { - "uid": "github/benvanwerkhoven/kernel_tuner", - "url": "https://github.com/benvanwerkhoven/kernel_tuner", - "rel": "/software/repository/github/benvanwerkhoven/kernel_tuner", - "avatar": "https://avatars0.githubusercontent.com/u/2337546?v=4", - "description": "Kernel Tuner", + "uid": "github/singularityhub/singularity-compose", + "url": "https://github.com/singularityhub/singularity-compose", + "rel": "/software/repository/github/singularityhub/singularity-compose", + "avatar": "https://avatars1.githubusercontent.com/u/24552884?v=4", + "description": "orchestration for singularity containers (under development)", "topics": [ - "opencl-kernels", - "kernel-tuner", - "cuda-kernels", - "python", - "gpu", - "cuda", - "opencl", - "c", - "cplusplus", - "autotuning", - "auto-tuning", - "gpu-computing", - "testing", - "software-development", - "optimization", - "machine-learning" + "singularity-compose", + "container-orchestration", + "singularity" ] }, { - "uid": "github/AndrewAnnex/SpiceyPy", - "url": "https://github.com/AndrewAnnex/SpiceyPy", - "rel": "/software/repository/github/AndrewAnnex/SpiceyPy", - "avatar": "https://avatars.githubusercontent.com/u/2126916?v=4", - "description": "SpiceyPy: a Pythonic Wrapper for the SPICE Toolkit.", + "uid": "github/singularityhub/sregistry", + "url": "https://github.com/singularityhub/sregistry", + "rel": "/software/repository/github/singularityhub/sregistry", + "avatar": "https://avatars1.githubusercontent.com/u/24552884?v=4", + "description": "server for storage and management of singularity images", "topics": [ - "python", - "nasa", - "toolkit", - "spice", - "space", - "ephemeris", - "navigation", - "hacktoberfest" + "singularityhub", + "singularity", + "singularity-containers", + "containers", + "management", + "registry" ] }, { - "uid": "github/chrisaberson/BetterReg", - "url": "https://github.com/chrisaberson/BetterReg", - "rel": "/software/repository/github/chrisaberson/BetterReg", - "avatar": "https://avatars.githubusercontent.com/u/18057823?v=4", - "description": "Better statistics for regression (OLS and logistic)", + "uid": "github/biomed-AI/GraphBepi", + "url": "https://github.com/biomed-AI/GraphBepi", + "rel": "/software/repository/github/biomed-AI/GraphBepi", + "avatar": "https://avatars.githubusercontent.com/u/57830798?v=4", + "description": null, "topics": [] }, { - "uid": "github/d-tear/SIAL", - "url": "https://github.com/d-tear/SIAL", - "rel": "/software/repository/github/d-tear/SIAL", - "avatar": "https://avatars0.githubusercontent.com/u/19397687?v=4", - "description": "Simple Image Analysis Library", + "uid": "github/ZhantianXu/PISAD", + "url": "https://github.com/ZhantianXu/PISAD", + "rel": "/software/repository/github/ZhantianXu/PISAD", + "avatar": "https://avatars.githubusercontent.com/u/125952645?v=4", + "description": "PISAD: reference-free intraspecies sample anomalies detetion tool based on k-mer counting ", "topics": [] }, { - "uid": "github/igorrivin/graphem", - "url": "https://github.com/igorrivin/graphem", - "rel": "/software/repository/github/igorrivin/graphem", - "avatar": "https://avatars.githubusercontent.com/u/9657684?v=4", + "uid": "github/StingraySoftware/stingray", + "url": "https://github.com/StingraySoftware/stingray", + "rel": "/software/repository/github/StingraySoftware/stingray", + "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", + "description": "Anything can happen in the next half hour (including spectral timing made easy)!", + "topics": [ + "x-ray", + "astronomy", + "blackhole", + "pulsars", + "timeseries", + "astrophysics", + "fourier-analysis", + "fourier-transform", + "time-series", + "time-series-analysis", + "x-ray-binaries", + "neutronstars", + "data-analysis", + "blackholes" + ] + }, + { + "uid": "github/StingraySoftware/HENDRICS", + "url": "https://github.com/StingraySoftware/HENDRICS", + "rel": "/software/repository/github/StingraySoftware/HENDRICS", + "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", + "description": "Shell scripts for spectral-timing analysis of X-ray astronomical data.", + "topics": [] + }, + { + "uid": "github/abelson-lab/smMIP-tools", + "url": "https://github.com/abelson-lab/smMIP-tools", + "rel": "/software/repository/github/abelson-lab/smMIP-tools", + "avatar": "https://avatars.githubusercontent.com/u/49252737?v=4", "description": null, "topics": [] }, { - "uid": "github/nkallima/sim-universal-construction", - "url": "https://github.com/nkallima/sim-universal-construction", - "rel": "/software/repository/github/nkallima/sim-universal-construction", - "avatar": "https://avatars.githubusercontent.com/u/4153902?v=4", - "description": "An open-source framework for concurrent data-structures and benchmarks. ", + "uid": "github/Novartis/torchsurv", + "url": "https://github.com/Novartis/torchsurv", + "rel": "/software/repository/github/Novartis/torchsurv", + "avatar": "https://avatars.githubusercontent.com/u/6154715?v=4", + "description": "Deep survival analysis made easy ", "topics": [ - "concurrency", - "concurrent-programming", - "parallel-programming", - "pthreads", - "cc-synch", - "psim", - "osci", - "benchmarks", - "concurrent-queues", - "concurrent-stacks", - "performance-overheads", - "performance-impact", - "machine-architectures", - "queue-locks" + "pytorch", + "survival-analysis", + "deep-learning" ] }, { - "uid": "github/cjbarrie/academictwitteR", - "url": "https://github.com/cjbarrie/academictwitteR", - "rel": "/software/repository/github/cjbarrie/academictwitteR", - "avatar": "https://avatars.githubusercontent.com/u/29574597?v=4", - "description": "Repo for academictwitteR package to query the Twitter Academic Research Product Track v2 API endpoint.", - "topics": [] - }, - { - "uid": "github/Tomaubier/CoperniFUS", - "url": "https://github.com/Tomaubier/CoperniFUS", - "rel": "/software/repository/github/Tomaubier/CoperniFUS", - "avatar": "https://avatars.githubusercontent.com/u/17113619?v=4", - "description": "A flexible Python-based GUI for stereotaxic experiment planning.", + "uid": "github/segasai/q3c", + "url": "https://github.com/segasai/q3c", + "rel": "/software/repository/github/segasai/q3c", + "avatar": "https://avatars.githubusercontent.com/u/109513?v=4", + "description": "PostgreSQL extension for spatial indexing on a sphere", "topics": [ - "neuroscience-experiments", - "neurostimulation", - "ultrasound" + "postgresql", + "sphere", + "astronomy", + "nearest-neighbors", + "query", + "coordinates" ] }, { - "uid": "github/AarhusCosmology/connect_public", - "url": "https://github.com/AarhusCosmology/connect_public", - "rel": "/software/repository/github/AarhusCosmology/connect_public", - "avatar": "https://avatars.githubusercontent.com/u/61975979?v=4", - "description": "Public branch of CONNECT", - "topics": [] - }, - { - "uid": "github/AarhusCosmology/prospect_public", - "url": "https://github.com/AarhusCosmology/prospect_public", - "rel": "/software/repository/github/AarhusCosmology/prospect_public", - "avatar": "https://avatars.githubusercontent.com/u/61975979?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/niceume/datasailr", - "url": "https://github.com/niceume/datasailr", - "rel": "/software/repository/github/niceume/datasailr", - "avatar": "https://avatars.githubusercontent.com/u/2307095?v=4", - "description": "Base repository for DataSailr R package, which enables row by row data manipulation. To build and/or develop DataSailr R package, use datasailr_toolchain repository.", - "topics": [] - }, - { - "uid": "github/JLiangLab/TransVW", - "url": "https://github.com/fhaghighi/TransVW", - "rel": "/software/repository/github/JLiangLab/TransVW", - "avatar": "https://avatars.githubusercontent.com/u/31901902?v=4", - "description": "Official Keras & PyTorch Implementation and Pre-trained Models for TransVW", + "uid": "github/segasai/rvspecfit", + "url": "https://github.com/segasai/rvspecfit", + "rel": "/software/repository/github/segasai/rvspecfit", + "avatar": "https://avatars.githubusercontent.com/u/109513?v=4", + "description": "Radial velocity and stellar parameter fitting code for large surveys", "topics": [ - "self-supervised-learning", - "transfer-learning", - "3d-models", - "medical-imaging", - "fine-tuning" + "astrophysics", + "spectroscopy" ] }, { - "uid": "github/BattModels/asimtools", - "url": "https://github.com/BattModels/asimtools", - "rel": "/software/repository/github/BattModels/asimtools", - "avatar": "https://avatars.githubusercontent.com/u/64616036?v=4", - "description": "Optimized workflow management and script handling for atomistic simulations", + "uid": "github/Ge-Lab/USAT", + "url": "https://github.com/Ge-Lab/USAT", + "rel": "/software/repository/github/Ge-Lab/USAT", + "avatar": "https://avatars.githubusercontent.com/u/103397680?v=4", + "description": "USAT is a software for analyzing and visualizing the Tandem Repeat (TR) alleles", "topics": [] }, { - "uid": "github/databio/GenomicDistributions", - "url": "https://github.com/databio/GenomicDistributions", - "rel": "/software/repository/github/databio/GenomicDistributions", - "avatar": "https://avatars.githubusercontent.com/u/13696008?v=4", - "description": "Calculate and plot distributions of genomic ranges", + "uid": "github/nhcrisp/ADBSat", + "url": "https://github.com/nhcrisp/ADBSat", + "rel": "/software/repository/github/nhcrisp/ADBSat", + "avatar": "https://avatars.githubusercontent.com/u/40802736?v=4", + "description": "Aerodynamic Database for Satellites", "topics": [] }, { - "uid": "github/PathwayCommons/grounding-search", - "url": "https://github.com/PathwayCommons/grounding-search", - "rel": "/software/repository/github/PathwayCommons/grounding-search", - "avatar": "https://avatars.githubusercontent.com/u/1605506?v=4", - "description": "A biological entity grounding search service ", - "topics": [ - "grounding", - "identifiers", - "search", - "biological-entities" - ] - }, - { - "uid": "github/darrencroton/sage", - "url": "https://github.com/darrencroton/sage", - "rel": "/software/repository/github/darrencroton/sage", - "avatar": "https://avatars.githubusercontent.com/u/2062219?v=4", - "description": "Home of the Semi-Analytic Galaxy Evolution (SAGE) galaxy formation model", + "uid": "github/BASTAcode/BASTA", + "url": "https://github.com/BASTAcode/BASTA", + "rel": "/software/repository/github/BASTAcode/BASTA", + "avatar": "https://avatars.githubusercontent.com/u/91265788?v=4", + "description": "BASTA: The BAyesian STellar Algorithm", "topics": [] }, { - "uid": "github/sklasfeld/DANPOS3", - "url": "https://github.com/sklasfeld/DANPOS3", - "rel": "/software/repository/github/sklasfeld/DANPOS3", - "avatar": "https://avatars.githubusercontent.com/u/7339712?v=4", - "description": "a toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing.", + "uid": "github/insilicomedicine/GENTRL", + "url": "https://github.com/insilicomedicine/GENTRL", + "rel": "/software/repository/github/insilicomedicine/GENTRL", + "avatar": "https://avatars.githubusercontent.com/u/47208953?v=4", + "description": "Generative Tensorial Reinforcement Learning (GENTRL) model", "topics": [] }, { - "uid": "github/SchmidtDSE/afscgap", - "url": "https://github.com/SchmidtDSE/afscgap", - "rel": "/software/repository/github/SchmidtDSE/afscgap", - "avatar": "https://avatars.githubusercontent.com/u/124641794?v=4", - "description": "Python-based tools for NOAA AFSC GAP marine species surveys data", + "uid": "github/swiftsim/swiftsimio", + "url": "https://github.com/SWIFTSIM/swiftsimio", + "rel": "/software/repository/github/swiftsim/swiftsimio", + "avatar": "https://avatars1.githubusercontent.com/u/37541309?v=4", + "description": "Python library for reading SWIFT data. Uses unyt and h5py.", "topics": [ - "biodiversity", - "biology", - "fish", - "fisheries", - "noaa" + "cosmology", + "particle", + "hdf5" ] }, { - "uid": "github/forceflow1049/phast", - "url": "https://github.com/forceflow1049/PhAst", - "rel": "/software/repository/github/forceflow1049/phast", - "avatar": "https://avatars.githubusercontent.com/u/1127046?v=4", - "description": "PhAst: A flexible IDL astronomical image viewer", + "uid": "github/timchurches/NetEpi-Collection", + "url": "https://github.com/timchurches/NetEpi-Collection", + "rel": "/software/repository/github/timchurches/NetEpi-Collection", + "avatar": "https://avatars.githubusercontent.com/u/2859105?v=4", + "description": "Communicable disease and epidemiological data collection and management system", "topics": [] }, { - "uid": "github/pvlib/pvlib-python", - "url": "https://github.com/pvlib/pvlib-python", - "rel": "/software/repository/github/pvlib/pvlib-python", - "avatar": "https://avatars3.githubusercontent.com/u/11037261?v=4", - "description": "A set of documented functions for simulating the performance of photovoltaic energy systems.", - "topics": [ - "solar-energy", - "python", - "renewable-energy", - "renewables", - "photovoltaic" - ] + "uid": "github/timchurches/NetEpi-Analysis", + "url": "https://github.com/timchurches/NetEpi-Analysis", + "rel": "/software/repository/github/timchurches/NetEpi-Analysis", + "avatar": "https://avatars.githubusercontent.com/u/2859105?v=4", + "description": "Web-based object-oriented data exploration and analysis system", + "topics": [] }, { - "uid": "github/eleniadam/npgreat", - "url": "https://github.com/eleniadam/npgreat", - "rel": "/software/repository/github/eleniadam/npgreat", - "avatar": "https://avatars.githubusercontent.com/u/31490261?v=4", - "description": "A hybrid assembly method that utilizes Nanopore and Linked-Reads datasets for the assembly of the human subtelomere regions.", + "uid": "github/biocore-ntnu/epic2", + "url": "https://github.com/biocore-ntnu/epic2", + "rel": "/software/repository/github/biocore-ntnu/epic2", + "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", + "description": "Ultraperformant reimplementation of SICER", "topics": [] }, { - "uid": "github/kevin218/Eureka", - "url": "https://github.com/kevin218/Eureka", - "rel": "/software/repository/github/kevin218/Eureka", - "avatar": "https://avatars.githubusercontent.com/u/21340541?v=4", - "description": "Eureka! is a data reduction and analysis pipeline intended for time-series observations with the James Webb Space Telescope (JWST).", + "uid": "github/biocore-ntnu/ncls", + "url": "https://github.com/biocore-ntnu/ncls", + "rel": "/software/repository/github/biocore-ntnu/ncls", + "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", + "description": "The Nested Containment List for Python. Basically a static interval-tree that is silly fast for both construction and lookups.", "topics": [ - "jwst", - "exoplanets", - "python" + "ncls", + "interval-tree", + "overlap-queries", + "python", + "numpy" ] }, { - "uid": "github/arvados/arvados", - "url": "https://github.com/arvados/arvados", - "rel": "/software/repository/github/arvados/arvados", - "avatar": "https://avatars.githubusercontent.com/u/2304206?v=4", - "description": "An open source platform for managing and analyzing biomedical big data", + "uid": "github/biocore-ntnu/pyranges", + "url": "https://github.com/biocore-ntnu/pyranges", + "rel": "/software/repository/github/biocore-ntnu/pyranges", + "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", + "description": "Performant Pythonic GenomicRanges", "topics": [ - "arvados", - "ruby", + "genomicranges", "python", - "go", - "docker", - "cluster", - "cloud", - "cwl", - "bigdata", - "bioinformatics", "genomics", - "workflow", - "aws", - "gcp", - "azure", - "workflow-engine" + "pandas", + "data-structures" ] }, { - "uid": "github/arnikz/PIQMIe", - "url": "https://github.com/arnikz/PIQMIe", - "rel": "/software/repository/github/arnikz/PIQMIe", - "avatar": "https://avatars2.githubusercontent.com/u/7456848?v=4", - "description": "Proteomics Identifications & Quantitations Data Management & Integration Service", + "uid": "github/Valar-hub/MMLPhoto-z", + "url": "https://github.com/Valar-hub/MMLPhoto-z", + "rel": "/software/repository/github/Valar-hub/MMLPhoto-z", + "avatar": "https://avatars.githubusercontent.com/u/57578516?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/dputhier/pygtftk", + "url": "https://github.com/dputhier/pygtftk", + "rel": "/software/repository/github/dputhier/pygtftk", + "avatar": "https://avatars.githubusercontent.com/u/1831198?v=4", + "description": "A python package and a set of shell commands to handle GTF files", "topics": [ - "proteomics", - "mass-spectrometry", - "bioinformatics-analysis", - "protein", - "identification", - "quantification", - "web-application" + "bioinformatics", + "gene", + "gtf", + "bed", + "bigwig", + "genomics", + "transcript", + "exon", + "cds", + "genomic", + "tss", + "tts", + "splicing", + "dna-sequences", + "intron", + "ngs", + "chip-seq", + "rna-seq" ] }, { - "uid": "github/mpeel/fastcc", - "url": "https://github.com/mpeel/fastcc", - "rel": "/software/repository/github/mpeel/fastcc", - "avatar": "https://avatars.githubusercontent.com/u/710707?v=4", - "description": "Fast colour corrections for Planck/WMAP/QUIJOTE etc.", + "uid": "github/MetaCell/scicrunch-antibody-registry", + "url": "https://github.com/MetaCell/scicrunch-antibody-registry", + "rel": "/software/repository/github/MetaCell/scicrunch-antibody-registry", + "avatar": "https://avatars.githubusercontent.com/u/10982870?v=4", + "description": "A repo for the SciCrunch antibody registry portal ", "topics": [] }, { - "uid": "github/mastodon-sc/mastodon-deep-lineage", - "url": "https://github.com/mastodon-sc/mastodon-deep-lineage", - "rel": "/software/repository/github/mastodon-sc/mastodon-deep-lineage", - "avatar": "https://avatars.githubusercontent.com/u/60662108?v=4", - "description": "A collection of plugins to analyse lineages of tracked objects in Mastodon", + "uid": "github/bhi-kimlab/StressGenePred", + "url": "https://github.com/bhi-kimlab/StressGenePred", + "rel": "/software/repository/github/bhi-kimlab/StressGenePred", + "avatar": "https://avatars0.githubusercontent.com/u/24263727?v=4", + "description": "Stress predicting framework with microarray data based on CMCL and logical correlation model", "topics": [] }, { - "uid": "github/ChengF-Lab/AOPEDF", - "url": "https://github.com/ChengF-Lab/AOPEDF", - "rel": "/software/repository/github/ChengF-Lab/AOPEDF", - "avatar": "https://avatars.githubusercontent.com/u/39405991?v=4", - "description": null, + "uid": "github/drphilmarshall/HumVI", + "url": "https://github.com/drphilmarshall/HumVI", + "rel": "/software/repository/github/drphilmarshall/HumVI", + "avatar": "https://avatars.githubusercontent.com/u/710903?v=4", + "description": "Color composite image creation, mostly following the Lupton, Wherry et al (2004) algorithm.", "topics": [] }, { - "uid": "github/IMMM-SFA/naturf", - "url": "https://github.com/IMMM-SFA/naturf", - "rel": "/software/repository/github/IMMM-SFA/naturf", - "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", - "description": "NATURF: Neighborhood Adaptive Tissues for Urban Resilience Futures", + "uid": "github/drphilmarshall/Pangloss", + "url": "https://github.com/drphilmarshall/Pangloss", + "rel": "/software/repository/github/drphilmarshall/Pangloss", + "avatar": "https://avatars.githubusercontent.com/u/710903?v=4", + "description": "Line of sight mass reconstruction in the Universe", "topics": [] }, { - "uid": "github/IMMM-SFA/statemodify", - "url": "https://github.com/IMMM-SFA/statemodify", - "rel": "/software/repository/github/IMMM-SFA/statemodify", - "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", - "description": "A package to modify StateMod's input and output files for exploratory modeling", - "topics": [] + "uid": "github/dunhamlab/PacRAT", + "url": "https://github.com/dunhamlab/PacRAT", + "rel": "/software/repository/github/dunhamlab/PacRAT", + "avatar": "https://avatars.githubusercontent.com/u/40642004?v=4", + "description": "Improving long-read barcode-variant mapping using multiple sequence alignment. ", + "topics": [ + "bioinformatics", + "pacbio", + "multiple-sequence-alignment" + ] }, { - "uid": "github/IMMM-SFA/gamut", - "url": "https://github.com/IMMM-SFA/gamut", - "rel": "/software/repository/github/IMMM-SFA/gamut", - "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", - "description": "An R package to identify multi-sector teleconnection complexity", + "uid": "github/rchartra/NcCut", + "url": "https://github.com/rchartra/NcCut", + "rel": "/software/repository/github/rchartra/NcCut", + "avatar": "https://avatars.githubusercontent.com/u/113725205?v=4", + "description": "A GUI for visualizing and transecting 3D data.", "topics": [] }, { - "uid": "github/IMMM-SFA/tell", - "url": "https://github.com/IMMM-SFA/tell", - "rel": "/software/repository/github/IMMM-SFA/tell", - "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", - "description": "A model to predict Total ELectricity Loads (TELL)", + "uid": "github/blackrim/phyutility", + "url": "https://github.com/blackrim/phyutility", + "rel": "/software/repository/github/blackrim/phyutility", + "avatar": "https://avatars.githubusercontent.com/u/160553?v=4", + "description": "simple analyses or modifications on both phylogenetic trees and data matrices", "topics": [] }, { - "uid": "github/IMMM-SFA/mosartwmpy", - "url": "https://github.com/IMMM-SFA/mosartwmpy", - "rel": "/software/repository/github/IMMM-SFA/mosartwmpy", - "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", - "description": "Python translation of MOSART-WM: a water routing and management model", + "uid": "github/bioinfo-center-pasteur-fr/toppred", + "url": "https://github.com/C3BI-pasteur-fr/toppred", + "rel": "/software/repository/github/bioinfo-center-pasteur-fr/toppred", + "avatar": "https://avatars.githubusercontent.com/u/9270247?v=4", + "description": "toppred :: Transmembrane topology prediction based on von Heijne, G. (1992) Membrane Protein Structure Prediction: Hydrophobicity Analysis and the 'Positive Inside' (PMID: 1593632)", "topics": [] }, { - "uid": "github/KathrynJones1/catwoman", - "url": "https://github.com/KathrynJones1/catwoman", - "rel": "/software/repository/github/KathrynJones1/catwoman", - "avatar": "https://avatars3.githubusercontent.com/u/53044821?v=4", - "description": "A transit modelling Python package for asymmetric light curves", + "uid": "github/matthiasfabry/spinOS", + "url": "https://github.com/matthiasfabry/spinOS", + "rel": "/software/repository/github/matthiasfabry/spinOS", + "avatar": "https://avatars.githubusercontent.com/u/17302115?v=4", + "description": "SPectroscopic and Interferometric Orbital Solution finder", "topics": [] }, { - "uid": "github/timothydmorton/vespa", - "url": "https://github.com/timothydmorton/VESPA", - "rel": "/software/repository/github/timothydmorton/vespa", - "avatar": "https://avatars.githubusercontent.com/u/1895387?v=4", - "description": "Validation of Exoplanet Signals using a Probabilistic Algorithm--- calculating false positive probabilities for transit signals", + "uid": "github/Yu606/odyssey", + "url": "https://github.com/Yu606/odyssey", + "rel": "/software/repository/github/Yu606/odyssey", + "avatar": "https://avatars.githubusercontent.com/u/31619679?v=4", + "description": null, "topics": [] }, { - "uid": "github/timothydmorton/isochrones", - "url": "https://github.com/timothydmorton/isochrones", - "rel": "/software/repository/github/timothydmorton/isochrones", - "avatar": "https://avatars.githubusercontent.com/u/1895387?v=4", - "description": "Pythonic stellar model grid access; easy MCMC fitting of stellar properties", + "uid": "github/dutilh/CAT", + "url": "https://github.com/dutilh/CAT", + "rel": "/software/repository/github/dutilh/CAT", + "avatar": "https://avatars.githubusercontent.com/u/15012855?v=4", + "description": "CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)", "topics": [] }, { - "uid": "github/pyspeckit/pyspeckit", - "url": "https://github.com/pyspeckit/pyspeckit", - "rel": "/software/repository/github/pyspeckit/pyspeckit", - "avatar": "https://avatars.githubusercontent.com/u/2507522?v=4", - "description": "Python Spectroscopic Toolkit", + "uid": "github/pec27/hfof", + "url": "https://github.com/pec27/hfof", + "rel": "/software/repository/github/pec27/hfof", + "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", + "description": "Friends-of-Friends via spatial hashing", "topics": [] }, { - "uid": "github/jfoster17/extinction-distances", - "url": "https://github.com/jfoster17/extinction-distances", - "rel": "/software/repository/github/jfoster17/extinction-distances", - "avatar": "https://avatars.githubusercontent.com/u/3639698?v=4", - "description": "Code to implement the blue star number count method from Foster et al. (2012) http://adsabs.harvard.edu/abs/2012ApJ...751..157F", + "uid": "github/pec27/lizard", + "url": "https://github.com/pec27/lizard", + "rel": "/software/repository/github/pec27/lizard", + "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", + "description": "lizard is an open-source code for the creation of particle initial conditions for cosmological simulations", "topics": [] }, { - "uid": "github/enthusi/feline", - "url": "https://github.com/enthusi/feline", - "rel": "/software/repository/github/enthusi/feline", - "avatar": "https://avatars.githubusercontent.com/u/30237776?v=4", - "description": "FindEmissionLINEs", + "uid": "github/pec27/smerfs", + "url": "https://github.com/pec27/smerfs", + "rel": "/software/repository/github/pec27/smerfs", + "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", + "description": "Creating large realisations of random fields on the sphere", "topics": [] }, { - "uid": "github/robertwissing/EOS", - "url": "https://github.com/robertwissing/EOS", - "rel": "/software/repository/github/robertwissing/EOS", - "avatar": "https://avatars.githubusercontent.com/u/32805862?v=4", + "uid": "github/EskelandLab/ShinyArchRUiO", + "url": "https://github.com/EskelandLab/ShinyArchRUiO", + "rel": "/software/repository/github/EskelandLab/ShinyArchRUiO", + "avatar": "https://avatars.githubusercontent.com/u/84804829?v=4", "description": null, "topics": [] }, { - "uid": "github/RozanskiT/suppnet", - "url": "https://github.com/RozanskiT/suppnet", - "rel": "/software/repository/github/RozanskiT/suppnet", - "avatar": "https://avatars.githubusercontent.com/u/30845410?v=4", - "description": "SUPPNet: Neural network for stellar spectrum normalisation", - "topics": [ - "spectroscopy", - "astronomy", - "astronomy-software" - ] - }, - { - "uid": "github/lazzati-astro/MCRaT", - "url": "https://github.com/lazzati-astro/MCRaT", - "rel": "/software/repository/github/lazzati-astro/MCRaT", - "avatar": "https://avatars.githubusercontent.com/u/24950291?v=4", - "description": "Monte Carlo Radiation Transfer Through an Astrophysical Jet", + "uid": "github/alexdaniel654/qlayers", + "url": "https://github.com/alexdaniel654/qlayers", + "rel": "/software/repository/github/alexdaniel654/qlayers", + "avatar": "https://avatars.githubusercontent.com/u/23356429?v=4", + "description": "Quantitative layer based analysis for renal magnetic resonance imaging.", "topics": [ - "astrophysics", - "photons", - "hydrodynamic-simulations", - "openmp", - "hdf5", - "mpi", - "simulation", - "radiative-transfer", - "gamma-ray-burst" + "image-analysis", + "kidney-disease", + "medical-imaging", + "mri" ] }, { - "uid": "github/IslasGECI/nerd", - "url": "https://github.com/IslasGECI/nerd", - "rel": "/software/repository/github/IslasGECI/nerd", - "avatar": "https://avatars.githubusercontent.com/u/40274821?v=4", - "description": "NERD: Numerical Estimation of Rodenticide Density", + "uid": "github/QuackenbushLab/NetworkDataCompanion", + "url": "https://github.com/QuackenbushLab/NetworkDataCompanion", + "rel": "/software/repository/github/QuackenbushLab/NetworkDataCompanion", + "avatar": "https://avatars.githubusercontent.com/u/13573979?v=4", + "description": "An R library of utilities for performing analyses on TCGA and GTEx data using the Network Zoo", "topics": [] }, { - "uid": "github/astro-otter/otter", - "url": "https://github.com/astro-otter/otter", - "rel": "/software/repository/github/astro-otter/otter", - "avatar": "https://avatars.githubusercontent.com/u/153562482?v=4", - "description": "Repository for the new TDE Catalog", - "topics": [] + "uid": "github/changliao1025/pyflowline", + "url": "https://github.com/changliao1025/pyflowline", + "rel": "/software/repository/github/changliao1025/pyflowline", + "avatar": "https://avatars.githubusercontent.com/u/20618384?v=4", + "description": "A mesh independent river network generator for hydrologic models", + "topics": [ + "hydrology", + "gis", + "river", + "graph", + "earth-system-model" + ] }, { - "uid": "github/UFParLab/aces4", - "url": "https://github.com/UFParLab/aces4", - "rel": "/software/repository/github/UFParLab/aces4", - "avatar": "https://avatars.githubusercontent.com/u/6758727?v=4", - "description": "Parallel Computational Chemistry Application", - "topics": [] + "uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", + "url": "https://github.com/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", + "rel": "/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", + "avatar": "https://avatars.githubusercontent.com/u/75179831?v=4", + "description": "Generates figures for \"Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions\"", + "topics": [ + "bioinformatics", + "r-loops" + ] }, { - "uid": "github/scotthgn/relagn", - "url": "https://github.com/scotthgn/RELAGN", - "rel": "/software/repository/github/scotthgn/relagn", - "avatar": "https://avatars.githubusercontent.com/u/99818820?v=4", - "description": "AGN SED model based off AGNSED (Kubota & Done 2018), but taking into account full GR ray tracing. These relativistic correction are calculated by doing the convolution with the relativistic transfer code KYCONV (Dovciak, Karas & Yaqoob 2004) at each radial annulus", + "uid": "github/epiforecasts/covidregionaldata", + "url": "https://github.com/epiforecasts/covidregionaldata", + "rel": "/software/repository/github/epiforecasts/covidregionaldata", + "avatar": "https://avatars.githubusercontent.com/u/54675094?v=4", + "description": "An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wherever available we also provide data on deaths, hospitalisations, and tests. National level data is also supported using a range of data sources as well as linelist data and links to intervention data sets.", "topics": [ - "astronomy", - "astrophysics", - "black-holes", - "relativity", - "spectral-analysis", - "spectral-modelling" + "covid-19", + "rstats", + "data", + "regional-data", + "open-science", + "r6" ] }, { - "uid": "github/scotthgn/AGNvar", - "url": "https://github.com/scotthgn/AGNvar", - "rel": "/software/repository/github/scotthgn/AGNvar", - "avatar": "https://avatars.githubusercontent.com/u/99818820?v=4", - "description": "Python code for modelling spectral timing properties in AGN. Performs calculations of fully time-dependent SEDs following an input variable X-ray light-curve (See Hagen & Done (2023a)", - "topics": [ - "agn", - "astrophysics" - ] + "uid": "github/an0wen/MARDIGRAS", + "url": "https://github.com/an0wen/MARDIGRAS", + "rel": "/software/repository/github/an0wen/MARDIGRAS", + "avatar": "https://avatars.githubusercontent.com/u/26632008?v=4", + "description": "MAss-Radius DIaGRAm with Sliders", + "topics": [] }, { - "uid": "github/DrMarc/slab", - "url": "https://github.com/DrMarc/slab", - "rel": "/software/repository/github/DrMarc/slab", - "avatar": "https://avatars.githubusercontent.com/u/7555727?v=4", - "description": "python classes for working with sounds and conducting psychoacoustic experiments", + "uid": "github/ankilab/EvoVis", + "url": "https://github.com/ankilab/EvoVis", + "rel": "/software/repository/github/ankilab/EvoVis", + "avatar": "https://avatars.githubusercontent.com/u/94447681?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/SoFiA-Admin/SoFiA-2", + "url": "https://github.com/SoFiA-Admin/SoFiA-2", + "rel": "/software/repository/github/SoFiA-Admin/SoFiA-2", + "avatar": "https://avatars.githubusercontent.com/u/6572706?v=4", + "description": "Version 2 of the HI Source Finding Application (SoFiA)", "topics": [ - "psychoacoustics", - "audio", - "sound" + "astronomy", + "radioastronomy", + "radio-astronomy", + "source-finding", + "parameterization", + "source-finder" ] }, { - "uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", - "url": "https://github.com/TeHanHunter/TESS_Gaia_Light_Curve", - "rel": "/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", - "avatar": "https://avatars.githubusercontent.com/u/49893001?v=4", - "description": "TESS FFI light curves fitted with effective PSF and decontaminated with Gaia DR3", + "uid": "github/bayzidlab/SAINT-Angle", + "url": "https://github.com/bayzidlab/SAINT-Angle", + "rel": "/software/repository/github/bayzidlab/SAINT-Angle", + "avatar": "https://avatars.githubusercontent.com/u/113564719?v=4", + "description": "This repository contains the official implementation of our paper titled SAINT-Angle: self-attention augmented inception-inside-inception network and transfer learning improve protein backbone torsion angles prediction.", "topics": [] }, { - "uid": "github/helenqu/scone", - "url": "https://github.com/helenqu/scone", - "rel": "/software/repository/github/helenqu/scone", - "avatar": "https://avatars.githubusercontent.com/u/8826297?v=4", - "description": null, + "uid": "github/tmux/tmux", + "url": "https://github.com/tmux/tmux", + "rel": "/software/repository/github/tmux/tmux", + "avatar": "https://avatars.githubusercontent.com/u/12054114?v=4", + "description": "tmux source code", "topics": [] }, { - "uid": "github/hematthi/SysSimPyPlots", - "url": "https://github.com/hematthi/SysSimPyPlots", - "rel": "/software/repository/github/hematthi/SysSimPyPlots", - "avatar": "https://avatars.githubusercontent.com/u/29897790?v=4", - "description": "Loading, analyzing, and plotting catalogs from SysSim", - "topics": [ - "exoplanets", - "kepler", - "models", - "plotting", - "python", - "simulations" - ] - }, - { - "uid": "github/hematthi/SysSimPyMMEN", - "url": "https://github.com/hematthi/SysSimPyMMEN", - "rel": "/software/repository/github/hematthi/SysSimPyMMEN", - "avatar": "https://avatars.githubusercontent.com/u/29897790?v=4", - "description": "Inferring the minimum-mass extrasolar nebula (MMEN) from SysSim", - "topics": [ - "exoplanets", - "kepler", - "models", - "planet-formation", - "plotting", - "protoplanetary-disks", - "python", - "simulations" - ] + "uid": "github/bbfrederick/stabilitycalc", + "url": "https://github.com/bbfrederick/stabilitycalc", + "rel": "/software/repository/github/bbfrederick/stabilitycalc", + "avatar": "https://avatars.githubusercontent.com/u/1036755?v=4", + "description": "Automatic QC processing for fMRI data", + "topics": [] }, { - "uid": "github/nifty-ppl/nifty", - "url": "https://github.com/NIFTy-PPL/NIFTy", - "rel": "/software/repository/github/nifty-ppl/nifty", - "avatar": "https://avatars.githubusercontent.com/u/151748361?v=4", - "description": "Probabilistic programming framework for signal inference algorithms that operate regardless of the underlying grids and their resolutions", + "uid": "github/dalipconstant/dalip-estimator", + "url": "https://github.com/dalipconstant/dalip-estimator", + "rel": "/software/repository/github/dalipconstant/dalip-estimator", + "avatar": "https://avatars.githubusercontent.com/u/232784211?v=4", + "description": "Empirical gravitational acceleration estimator from lensing observables", "topics": [] }, { - "uid": "github/realfastvla/realfast", - "url": "https://github.com/realfastvla/realfast", - "rel": "/software/repository/github/realfastvla/realfast", - "avatar": "https://avatars.githubusercontent.com/u/20173956?v=4", - "description": "Real-time interferometric data analysis for the VLA", + "uid": "github/ksahlin/strobealign", + "url": "https://github.com/ksahlin/strobealign", + "rel": "/software/repository/github/ksahlin/strobealign", + "avatar": "https://avatars.githubusercontent.com/u/1714667?v=4", + "description": "Aligns short reads using dynamic seed size with strobemers", "topics": [ - "data-analysis", - "cluster", - "radio", - "astronomy", - "transient-astronomy", - "distributed-computing" + "alignment", + "illumina", + "bioinformatics", + "strobemers", + "short-read-mapping" ] }, { - "uid": "github/realfastvla/rfpipe", - "url": "https://github.com/realfastvla/rfpipe", - "rel": "/software/repository/github/realfastvla/rfpipe", - "avatar": "https://avatars.githubusercontent.com/u/20173956?v=4", - "description": "Fast radio interferometric transient search pipeline", - "topics": [ - "radio-astronomy", - "python", - "pipeline", - "transients", - "interferometry" - ] + "uid": "github/me-manu/gammaALPs", + "url": "https://github.com/me-manu/gammaALPs", + "rel": "/software/repository/github/me-manu/gammaALPs", + "avatar": "https://avatars.githubusercontent.com/u/1806684?v=4", + "description": "A python code to calculate the conversion probability between photons and axions / axionlike particles", + "topics": [] }, { - "uid": "github/lynx-x-ray-observatory/soxs", - "url": "https://github.com/lynx-x-ray-observatory/soxs", - "rel": "/software/repository/github/lynx-x-ray-observatory/soxs", - "avatar": "https://avatars.githubusercontent.com/u/47825814?v=4", - "description": "SOXS: Simulated Observations of X-ray Sources", + "uid": "github/mzytnicki/srnaMapper", + "url": "https://github.com/mzytnicki/srnaMapper", + "rel": "/software/repository/github/mzytnicki/srnaMapper", + "avatar": "https://avatars.githubusercontent.com/u/34034101?v=4", + "description": "Mapping small RNA data to a genome.", "topics": [] }, { - "uid": "github/ledatelescope/bifrost", - "url": "https://github.com/ledatelescope/bifrost", - "rel": "/software/repository/github/ledatelescope/bifrost", - "avatar": "https://avatars.githubusercontent.com/u/9952818?v=4", - "description": "A stream processing framework for high-throughput applications.", - "topics": [ - "gpu", - "pipeline", - "python", - "cpp", - "bifrost", - "high-throughput-computing", - "high-performance-computing", - "astronomy", - "radio-astronomy", - "cuda" - ] + "uid": "github/niemasd/CoaTran", + "url": "https://github.com/niemasd/CoaTran", + "rel": "/software/repository/github/niemasd/CoaTran", + "avatar": "https://avatars.githubusercontent.com/u/4195510?v=4", + "description": "CoaTran: Coalescent tree simulation along a transmission network", + "topics": [] }, { - "uid": "github/MNiwano/Eclaire", - "url": "https://github.com/MNiwano/Eclaire", - "rel": "/software/repository/github/MNiwano/Eclaire", - "avatar": "https://avatars.githubusercontent.com/u/50729838?v=4", - "description": "Python package using GPU via CUDA for astronomical image reduction", + "uid": "github/metagenopolis/CroCoDeEL", + "url": "https://github.com/metagenopolis/CroCoDeEL", + "rel": "/software/repository/github/metagenopolis/CroCoDeEL", + "avatar": "https://avatars.githubusercontent.com/u/150909814?v=4", + "description": "CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data", "topics": [ - "python" + "contamination-detection", + "metagenomics", + "quality-control" ] }, { - "uid": "github/FabianPlum/OmniTrax", - "url": "https://github.com/FabianPlum/OmniTrax", - "rel": "/software/repository/github/FabianPlum/OmniTrax", - "avatar": "https://avatars.githubusercontent.com/u/26245490?v=4", - "description": "Deep learning-driven multi animal tracking and pose estimation add-on for Blender", + "uid": "github/ndaniyar/aphot", + "url": "https://github.com/ndaniyar/aphot", + "rel": "/software/repository/github/ndaniyar/aphot", + "avatar": "https://avatars.githubusercontent.com/u/723917?v=4", + "description": "Photon Asymmetry", + "topics": [] + }, + { + "uid": "github/sfarrens/sf_deconvolve", + "url": "https://github.com/sfarrens/sf_deconvolve", + "rel": "/software/repository/github/sfarrens/sf_deconvolve", + "avatar": "https://avatars.githubusercontent.com/u/6851839?v=4", + "description": "A Python code designed for PSF deconvolution using a low-rank approximation and sparsity. The code can handle a fixed PSF for the entire field or a stack of PSFs for each galaxy position.", + "topics": [] + }, + { + "uid": "github/sfarrens/sfof", + "url": "https://github.com/sfarrens/sfof", + "rel": "/software/repository/github/sfarrens/sfof", + "avatar": "https://avatars.githubusercontent.com/u/6851839?v=4", + "description": "SFoF is a friends-of-friends galaxy cluster detection algorithm that operates in either spectroscopic or photometric redshift space. The linking parameters, both transverse and along the line-of-sight, change as a function of redshift to account for selection effects. The code is written in C++ and implements OMP to loop through the photometric redshift bins.", "topics": [ - "blender", - "deeplabcut", - "deeplearning", - "object-detection", - "tracking", - "yolo" + "redshift", + "percolation", + "galaxy", + "clusters", + "cosmology" ] }, { - "uid": "github/sourmash-bio/sourmash", - "url": "https://github.com/sourmash-bio/sourmash", - "rel": "/software/repository/github/sourmash-bio/sourmash", - "avatar": "https://avatars.githubusercontent.com/u/59402508?v=4", - "description": "Quickly search, compare, and analyze genomic and metagenomic data sets.", + "uid": "github/jteutenberg/downpore", + "url": "https://github.com/jteutenberg/downpore", + "rel": "/software/repository/github/jteutenberg/downpore", + "avatar": "https://avatars.githubusercontent.com/u/1536537?v=4", + "description": "a suite of tools for use in genome assembly and consensus.", "topics": [ - "minhash", - "bioinformatics", - "rust", - "python", - "sourmash" + "genome-assembly", + "long-read", + "genome-scaffolding", + "genome-mapping" ] }, { - "uid": "github/AndresRTejedor/Mold", - "url": "https://github.com/AndresRTejedor/Mold", - "rel": "/software/repository/github/AndresRTejedor/Mold", - "avatar": "https://avatars.githubusercontent.com/u/62102050?v=4", - "description": "Lammps package including square-like well potential to implement Mold integration and Lattice mold techniques", + "uid": "github/HEAP-EXPOSOME/KITE", + "url": "https://github.com/HEAP-EXPOSOME/KITE", + "rel": "/software/repository/github/HEAP-EXPOSOME/KITE", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "KITE: K-mer Index Tversky Estimator application", "topics": [] }, { - "uid": "github/suchanek/proteusPy", - "url": "https://github.com/suchanek/proteusPy", - "rel": "/software/repository/github/suchanek/proteusPy", - "avatar": "https://avatars.githubusercontent.com/u/4127770?v=4", - "description": "A package for the modeling and analysis of proteins of known structure", - "topics": [ - "biophysics", - "structural" - ] + "uid": "github/HEAP-EXPOSOME/hopsworks-chef", + "url": "https://github.com/HEAP-EXPOSOME/hopsworks-chef", + "rel": "/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "Chef Cookbook for Hopsworks ", + "topics": [] }, { - "uid": "github/bulik/ldsc", - "url": "https://github.com/bulik/ldsc", - "rel": "/software/repository/github/bulik/ldsc", - "avatar": "https://avatars.githubusercontent.com/u/3229189?v=4", - "description": "LD Score Regression (LDSC)", + "uid": "github/HEAP-EXPOSOME/hopsworks", + "url": "https://github.com/HEAP-EXPOSOME/hopsworks", + "rel": "/software/repository/github/HEAP-EXPOSOME/hopsworks", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "Hopsworks - Data-Intensive AI platform with a Feature Store", "topics": [] }, { - "uid": "github/BioGearsEngine/core", - "url": "https://github.com/BioGearsEngine/core", - "rel": "/software/repository/github/BioGearsEngine/core", - "avatar": "https://avatars0.githubusercontent.com/u/8700591?v=4", - "description": "Repository for libbiogears and all core utilities", + "uid": "github/HEAP-EXPOSOME/metagenomics-ML", + "url": "https://github.com/HEAP-EXPOSOME/metagenomics-ML", + "rel": "/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "ML-based sequence classification pipeline", "topics": [] }, { - "uid": "github/jeetsukumaran/DendroPy", - "url": "https://github.com/jeetsukumaran/DendroPy", - "rel": "/software/repository/github/jeetsukumaran/DendroPy", - "avatar": "https://avatars.githubusercontent.com/u/26183?v=4", - "description": "A Python library for phylogenetic scripting, simulation, data processing and manipulation.", + "uid": "github/HEAP-EXPOSOME/streaming-demo", + "url": "https://github.com/HEAP-EXPOSOME/streaming-demo", + "rel": "/software/repository/github/HEAP-EXPOSOME/streaming-demo", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "Streaming tutorial notebooks for PPG data ", "topics": [] }, { - "uid": "github/ben-cassese/squishyplanet", - "url": "https://github.com/ben-cassese/squishyplanet", - "rel": "/software/repository/github/ben-cassese/squishyplanet", - "avatar": "https://avatars.githubusercontent.com/u/10929214?v=4", - "description": "Transits of non-spherical exoplanets", + "uid": "github/HEAP-EXPOSOME/exposome-demo", + "url": "https://github.com/HEAP-EXPOSOME/exposome-demo", + "rel": "/software/repository/github/HEAP-EXPOSOME/exposome-demo", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "chemical exposome pipeline demo using docker", "topics": [] }, { - "uid": "github/rgerum/pylustrator", - "url": "https://github.com/rgerum/pylustrator", - "rel": "/software/repository/github/rgerum/pylustrator", - "avatar": "https://avatars0.githubusercontent.com/u/14153051?v=4", - "description": "Visualisations of data are at the core of every publication of scientific research results. They have to be as clear as possible to facilitate the communication of research. As data can have different formats and shapes, the visualisations often have to be adapted to reflect the data as well as possible. We developed Pylustrator, an interface to directly edit python generated matplotlib graphs to finalize them for publication. Therefore, subplots can be resized and dragged around by the mouse, text and annotations can be added. The changes can be saved to the initial plot file as python code.", - "topics": [ - "matplotlib", - "gui", - "code-generation", - "interactive", - "visualisation" - ] + "uid": "github/HEAP-EXPOSOME/HPV-meta", + "url": "https://github.com/HEAP-EXPOSOME/HPV-meta", + "rel": "/software/repository/github/HEAP-EXPOSOME/HPV-meta", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": null, + "topics": [] }, { - "uid": "github/alexriss/SpmImageTycoon.jl", - "url": "https://github.com/alexriss/SpmImageTycoon.jl", - "rel": "/software/repository/github/alexriss/SpmImageTycoon.jl", - "avatar": "https://avatars.githubusercontent.com/u/1452525?v=4", - "description": "Organize Scanning Probe Microscopy (SPM, STM, AFM) Images and Spectra.", - "topics": [ - "spm", - "afm", - "stm", - "julia", - "electron", - "javascript", - "julialang", - "spectroscopy" - ] + "uid": "github/HEAP-EXPOSOME/biopipe", + "url": "https://github.com/HEAP-EXPOSOME/biopipe", + "rel": "/software/repository/github/HEAP-EXPOSOME/biopipe", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "Taxonomy classification pipeline (bacteria, virus, fungi)", + "topics": [] }, { - "uid": "github/tzhu-bio/UMI-ATAC-seq", - "url": "https://github.com/tzhu-bio/UMI-ATAC-seq", - "rel": "/software/repository/github/tzhu-bio/UMI-ATAC-seq", - "avatar": "https://avatars.githubusercontent.com/u/54537420?v=4", - "description": null, - "topics": [ - "umi", - "atac-seq", - "deduplication" - ] + "uid": "github/HEAP-EXPOSOME/HPV-KITE", + "url": "https://github.com/HEAP-EXPOSOME/HPV-KITE", + "rel": "/software/repository/github/HEAP-EXPOSOME/HPV-KITE", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "HPV-Kite: HPV K-mer Index Tversky Estimator application", + "topics": [] }, { - "uid": "github/carpenterphysics/DarkFlux", - "url": "https://github.com/carpenterphysics/DarkFlux", - "rel": "/software/repository/github/carpenterphysics/DarkFlux", - "avatar": "https://avatars.githubusercontent.com/u/36904752?v=4", - "description": "DarkFlux is a tool to compute Dark Matter the Dark Matter annihilation spectrum in Next Generation Dark Matter Models", + "uid": "github/HEAP-EXPOSOME/ConsumerData", + "url": "https://github.com/HEAP-EXPOSOME/ConsumerData", + "rel": "/software/repository/github/HEAP-EXPOSOME/ConsumerData", + "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "description": "Pipeline for ConsumerData", "topics": [] }, { - "uid": "github/idaholab/MontePy", - "url": "https://github.com/idaholab/MontePy", - "rel": "/software/repository/github/idaholab/MontePy", - "avatar": "https://avatars.githubusercontent.com/u/3855370?v=4", - "description": "MontePy is the most user friendly Python library (API) to read, edit, and write MCNP input files.", - "topics": [ - "mcnp6", - "monte-carlo", - "neutronics", - "api", - "radiation-transport", - "mcnp" - ] + "uid": "github/inesbmartins02/HYMET", + "url": "https://github.com/inesbmartins02/HYMET", + "rel": "/software/repository/github/inesbmartins02/HYMET", + "avatar": "https://avatars.githubusercontent.com/u/165905510?v=4", + "description": null, + "topics": [] }, { - "uid": "github/idaholab/moose", - "url": "https://github.com/idaholab/moose", - "rel": "/software/repository/github/idaholab/moose", - "avatar": "https://avatars0.githubusercontent.com/u/3855370?v=4", - "description": "Multiphysics Object Oriented Simulation Environment", + "uid": "github/paucablop/chemotools", + "url": "https://github.com/paucablop/chemotools", + "rel": "/software/repository/github/paucablop/chemotools", + "avatar": "https://avatars.githubusercontent.com/u/34301441?v=4", + "description": "Integrate your chemometric tools with the scikit-learn API \ud83e\uddea \ud83e\udd16 ", "topics": [ - "multiphysics", - "simulation", - "fem", - "finite-elements", - "object-oriented", - "parallel", - "amr" + "chemometrics", + "machine-learning", + "python", + "scikit-learn", + "sklearn", + "spectra", + "hacktoberfest", + "artificial-intelligence", + "autoencoders", + "deep-learning", + "ir-spectroscopy", + "multivariate-analysis", + "raman-spectroscopy", + "spectroscopy", + "nir-spectroscopy" ] }, { - "uid": "github/astro-group-bristol/Gradus.jl", - "url": "https://github.com/astro-group-bristol/Gradus.jl", - "rel": "/software/repository/github/astro-group-bristol/Gradus.jl", - "avatar": "https://avatars.githubusercontent.com/u/93991759?v=4", - "description": "Extensible spacetime agnostic general relativistic ray-tracing (GRRT).", + "uid": "github/iosefa/PyForestScan", + "url": "https://github.com/iosefa/PyForestScan", + "rel": "/software/repository/github/iosefa/PyForestScan", + "avatar": "https://avatars.githubusercontent.com/u/24607032?v=4", + "description": "A python package for calculating forest structural metrics from airborne point clouds.", "topics": [ - "astrophysics", - "black-holes", - "general-relativity", - "julia", - "ray-tracing", - "physics", - "grrt", - "relativistic-ray-tracing", - "geodesic", - "raytracing", - "radiative-transfer" + "ecology", + "lidar", + "point-cloud", + "forest-structure" ] }, { - "uid": "github/BU-ISCIII/plasmidID", - "url": "https://github.com/BU-ISCIII/plasmidID", - "rel": "/software/repository/github/BU-ISCIII/plasmidID", - "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", - "description": "PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.", + "uid": "github/EvolBioInf/phylonium", + "url": "https://github.com/EvolBioInf/phylonium", + "rel": "/software/repository/github/EvolBioInf/phylonium", + "avatar": "https://avatars.githubusercontent.com/u/7930865?v=4", + "description": "\u2665 Fast and Accurate Estimation of Evolutionary Distances", "topics": [ - "plasmid", - "ngs", - "ngs-analysis", - "microbiology", - "whole-genome-sequencing" + "bioinformatics", + "alignment-free", + "phylogenetics" ] }, { - "uid": "github/BU-ISCIII/taranis", - "url": "https://github.com/BU-ISCIII/taranis", - "rel": "/software/repository/github/BU-ISCIII/taranis", - "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", - "description": "cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.", + "uid": "github/EvolBioInf/andi", + "url": "https://github.com/EvolBioInf/andi", + "rel": "/software/repository/github/EvolBioInf/andi", + "avatar": "https://avatars.githubusercontent.com/u/7930865?v=4", + "description": "\u2665 Efficient Estimation of Evolutionary Distances", "topics": [ - "sequencing", - "cgmlst", - "wgmlst", - "mlst", - "bacterial-genomes", - "outbreak-data-analysis", - "outbreak-detection" + "bioinformatics", + "alignment-free" ] }, { - "uid": "github/BU-ISCIII/iSkyLIMS", - "url": "https://github.com/BU-ISCIII/iSkyLIMS", - "rel": "/software/repository/github/BU-ISCIII/iSkyLIMS", - "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", - "description": "is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.", - "topics": [ - "bioinformatics-analysis", - "lims", - "workflow", - "ngs-analysis", - "ngs", - "ngs-data" - ] - }, - { - "uid": "github/SKA-INAF/caesar-rest", - "url": "https://github.com/SKA-INAF/caesar-rest", - "rel": "/software/repository/github/SKA-INAF/caesar-rest", - "avatar": "https://avatars.githubusercontent.com/u/32369098?v=4", - "description": "Rest API for caesar source finder application", - "topics": [ - "rest-api", - "flask", - "celery", - "image-processing", - "radio-astronomy", - "caesar" - ] - }, - { - "uid": "github/Peppags/CNN-SVR", - "url": "https://github.com/Peppags/CNN-SVR", - "rel": "/software/repository/github/Peppags/CNN-SVR", - "avatar": "https://avatars.githubusercontent.com/u/40748992?v=4", - "description": "CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity", + "uid": "github/vgl-hub/gfastats", + "url": "https://github.com/vgl-hub/gfastats", + "rel": "/software/repository/github/vgl-hub/gfastats", + "avatar": "https://avatars.githubusercontent.com/u/53915985?v=4", + "description": "A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.", "topics": [] }, { - "uid": "github/snek5000/snek5000", - "url": "https://github.com/snek5000/snek5000", - "rel": "/software/repository/github/snek5000/snek5000", - "avatar": "https://avatars.githubusercontent.com/u/99480879?v=4", - "description": ":snake: Python framework for Nek5000 :rocket:", - "topics": [ - "python", - "nek5000", - "snek5000", - "fluidsim", - "snakemake", - "jinja2", - "fluiddyn", - "cfd", - "simulation", - "closember", - "workflow" - ] + "uid": "github/minkailin/stratsi", + "url": "https://github.com/minkailin/stratsi", + "rel": "/software/repository/github/minkailin/stratsi", + "avatar": "https://avatars.githubusercontent.com/u/4484564?v=4", + "description": "stratified streaming instability", + "topics": [] }, { - "uid": "github/BlauGroup/RNMC", - "url": "https://github.com/BlauGroup/RNMC", - "rel": "/software/repository/github/BlauGroup/RNMC", - "avatar": "https://avatars.githubusercontent.com/u/86630735?v=4", - "description": null, + "uid": "github/eaobservatory/jcmt_coadd", + "url": "https://github.com/eaobservatory/jcmt_coadd", + "rel": "/software/repository/github/eaobservatory/jcmt_coadd", + "avatar": "https://avatars.githubusercontent.com/u/2035640?v=4", + "description": "UKT14 photometry data reduction tool", "topics": [] }, { - "uid": "github/ExoJulia/SysSimExClusters", - "url": "https://github.com/ExoJulia/SysSimExClusters", - "rel": "/software/repository/github/ExoJulia/SysSimExClusters", - "avatar": "https://avatars.githubusercontent.com/u/46846999?v=4", - "description": "Example of Clustered Planetary System Model for SysSim", + "uid": "github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", + "url": "https://github.com/eXtremeGravityInstitute/LISA-Massive-Black-Hole", + "rel": "/software/repository/github/eXtremeGravityInstitute/LISA-Massive-Black-Hole", + "avatar": "https://avatars.githubusercontent.com/u/37002921?v=4", + "description": null, "topics": [] }, { - "uid": "github/ExoJulia/ExoplanetsSysSim.jl", - "url": "https://github.com/ExoJulia/ExoplanetsSysSim.jl", - "rel": "/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", - "avatar": "https://avatars.githubusercontent.com/u/46846999?v=4", - "description": "Exoplanet System Simulation: core files", + "uid": "github/eXtremeGravityInstitute/QuickCBC", + "url": "https://github.com/eXtremeGravityInstitute/QuickCBC", + "rel": "/software/repository/github/eXtremeGravityInstitute/QuickCBC", + "avatar": "https://avatars.githubusercontent.com/u/37002921?v=4", + "description": "Rapid and Reliable Inference for Binary Mergers", "topics": [] }, { - "uid": "github/czbiohub/cerebra", - "url": "https://github.com/czbiohub/cerebra", - "rel": "/software/repository/github/czbiohub/cerebra", - "avatar": "https://avatars3.githubusercontent.com/u/28747162?v=4", - "description": "A tool for fast and accurate summarizing of variant calling format (VCF) files", + "uid": "github/vaexio/vaex", + "url": "https://github.com/vaexio/vaex", + "rel": "/software/repository/github/vaexio/vaex", + "avatar": "https://avatars.githubusercontent.com/u/45720408?v=4", + "description": "Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second \ud83d\ude80", "topics": [ - "variant-calling", - "mutations", - "scrna-seq", - "genomics" + "dataframe", + "python", + "bigdata", + "tabular-data", + "visualization", + "memory-mapped-file", + "hdf5", + "machine-learning", + "machinelearning" ] }, { - "uid": "github/eblur/dust", - "url": "https://github.com/eblur/dust", - "rel": "/software/repository/github/eblur/dust", - "avatar": "https://avatars.githubusercontent.com/u/2516513?v=4", - "description": "For calculating dust scattering and extinction", + "uid": "github/ARC-OPT/wbc", + "url": "https://github.com/ARC-OPT/wbc", + "rel": "/software/repository/github/ARC-OPT/wbc", + "avatar": "https://avatars.githubusercontent.com/u/100422923?v=4", + "description": "C++ library for optimization-based control of redundant robots", "topics": [] }, { - "uid": "github/bic-nirrh/precocity", - "url": "https://github.com/bic-nirrh/precocity", - "rel": "/software/repository/github/bic-nirrh/precocity", - "avatar": "https://avatars.githubusercontent.com/u/56425008?v=4", - "description": "Database and enrichment analysis of genes associated with precocious puberty", + "uid": "github/Ensembl/WiggleTools", + "url": "https://github.com/Ensembl/WiggleTools", + "rel": "/software/repository/github/Ensembl/WiggleTools", + "avatar": "https://avatars.githubusercontent.com/u/5832463?v=4", + "description": "Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency", "topics": [] }, { - "uid": "github/easystats/performance", - "url": "https://github.com/easystats/performance", - "rel": "/software/repository/github/easystats/performance", - "avatar": "https://avatars.githubusercontent.com/u/47102598?v=4", - "description": ":muscle: Models' quality and performance metrics (R2, ICC, LOO, AIC, BF, ...)", - "topics": [ - "r2", - "aic", - "performance", - "models", - "loo", - "r", - "easystats", - "mixed-models" - ] - }, - { - "uid": "github/easystats/correlation", - "url": "https://github.com/easystats/correlation", - "rel": "/software/repository/github/easystats/correlation", - "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", - "description": ":link: Methods for Correlation Analysis", - "topics": [ - "correlation", - "r", - "easystats", - "bayesian", - "partial-correlations", - "gaussian-graphical-models", - "regression", - "correlations", - "matrix", - "bayesian-correlations" - ] - }, - { - "uid": "github/easystats/modelbased", - "url": "https://github.com/easystats/modelbased", - "rel": "/software/repository/github/easystats/modelbased", - "avatar": "https://avatars.githubusercontent.com/u/47102598?v=4", - "description": ":chart_with_upwards_trend: Estimate effects, contrasts and means based on statistical models", - "topics": [ - "contrasts", - "marginal", - "means", - "marginal-effects", - "predict", - "estimate", - "easystats", - "r", - "contrast-analysis", - "hacktoberfest", - "ggplot2" - ] - }, - { - "uid": "github/easystats/parameters", - "url": "https://github.com/easystats/parameters", - "rel": "/software/repository/github/easystats/parameters", - "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", - "description": ":bar_chart: Computation and processing of models' parameters", - "topics": [ - "pvalues", - "parameters", - "beta", - "ci", - "confidence-intervals", - "r", - "easystats", - "bootsrap", - "standardize", - "pca", - "feature", - "fa" - ] + "uid": "github/Ensembl/ensembl-vep", + "url": "https://github.com/Ensembl/ensembl-vep", + "rel": "/software/repository/github/Ensembl/ensembl-vep", + "avatar": "https://avatars.githubusercontent.com/u/5832463?v=4", + "description": "The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants", + "topics": [] }, { - "uid": "github/easystats/effectsize", - "url": "https://github.com/easystats/effectsize", - "rel": "/software/repository/github/easystats/effectsize", - "avatar": "https://avatars1.githubusercontent.com/u/47102598?v=4", - "description": ":dragon: Compute and work with indices of effect size and standardized parameters", - "topics": [ - "effectsize", - "correlation", - "conversion", - "interpretation", - "cohens-d", - "anova", - "standardization", - "hedges-g", - "effect-size", - "compute", - "standardized" - ] + "uid": "github/HajimeKawahara/sot", + "url": "https://github.com/HajimeKawahara/sot", + "rel": "/software/repository/github/HajimeKawahara/sot", + "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", + "description": "Python package for taking a photo and movie of an exo Earth", + "topics": [] }, { - "uid": "github/Chenmi0619/GALMoss", - "url": "https://github.com/Chenmi0619/GALMoss", - "rel": "/software/repository/github/Chenmi0619/GALMoss", - "avatar": "https://avatars.githubusercontent.com/u/112360046?v=4", - "description": "a galaxy surface bightness fitting code via gradient descent", + "uid": "github/HajimeKawahara/juwvid", + "url": "https://github.com/HajimeKawahara/juwvid", + "rel": "/software/repository/github/HajimeKawahara/juwvid", + "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", + "description": "Julia code for the time-frequency analysis", "topics": [] }, { - "uid": "github/scrm/scrmhub.io", - "url": null, - "rel": "/software/repository/github/scrm/scrmhub.io", - "avatar": "", - "description": "a coalescent simulator for biological sequences.", + "uid": "github/HajimeKawahara/exojax", + "url": "https://github.com/HajimeKawahara/exojax", + "rel": "/software/repository/github/HajimeKawahara/exojax", + "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", + "description": "\ud83d\udc08 Automatic differentiable spectrum modeling of exoplanets/brown dwarfs using JAX, compatible with NumPyro and JAXopt", "topics": [] }, { - "uid": "github/dieghernan/tidyterra", - "url": "https://github.com/dieghernan/tidyterra", - "rel": "/software/repository/github/dieghernan/tidyterra", - "avatar": "https://avatars.githubusercontent.com/u/25656809?v=4", - "description": "tidyverse and ggplot2 methods for terra spatial objects", + "uid": "github/VasuLab/rgfrosh", + "url": "https://github.com/VasuLab/rgfrosh", + "rel": "/software/repository/github/VasuLab/rgfrosh", + "avatar": "https://avatars.githubusercontent.com/u/88801849?v=4", + "description": "A frozen shock solver for ideal and real gas equations of state.", "topics": [ - "ggplot-extension", - "r-package", - "r-spatial", - "rspatial", - "rstats", - "rstats-package", - "terra", - "cran", - "cran-r", - "r" + "shock-tube", + "equation-of-state", + "numpy", + "python", + "ideal-gas", + "real-gas" ] }, { - "uid": "github/maho3/ltu-ili", - "url": "https://github.com/maho3/ltu-ili", - "rel": "/software/repository/github/maho3/ltu-ili", - "avatar": "https://avatars.githubusercontent.com/u/11132524?v=4", - "description": "Robust ML in Astro", + "uid": "github/cespinosa/pyHIIexplorerV2", + "url": "https://github.com/cespinosa/pyHIIexplorerV2", + "rel": "/software/repository/github/cespinosa/pyHIIexplorerV2", + "avatar": "https://avatars.githubusercontent.com/u/46690546?v=4", + "description": null, "topics": [] }, { - "uid": "github/myfang2021/VIPPID", - "url": "https://github.com/myfang2021/VIPPID", - "rel": "/software/repository/github/myfang2021/VIPPID", - "avatar": "https://avatars.githubusercontent.com/u/85163173?v=4", + "uid": "github/JKoblitz/DSMZCellDive", + "url": "https://github.com/JKoblitz/DSMZCellDive", + "rel": "/software/repository/github/JKoblitz/DSMZCellDive", + "avatar": "https://avatars.githubusercontent.com/u/22150395?v=4", "description": null, - "topics": [] + "topics": [ + "cancer-research", + "str-profiling", + "cell-biology", + "cell-lines" + ] }, { - "uid": "github/siavash-saki/tesspy", - "url": "https://github.com/siavash-saki/tesspy", - "rel": "/software/repository/github/siavash-saki/tesspy", - "avatar": "https://avatars.githubusercontent.com/u/54578447?v=4", - "description": null, - "topics": [] + "uid": "github/alesantuz/musclesyneRgies", + "url": "https://github.com/alesantuz/musclesyneRgies", + "rel": "/software/repository/github/alesantuz/musclesyneRgies", + "avatar": "https://avatars.githubusercontent.com/u/7524938?v=4", + "description": "R package to extract muscle synergies from electromyogram", + "topics": [ + "muscle-synergies", + "emg", + "nmf", + "rstudio", + "r", + "physiol" + ] }, { - "uid": "github/jkluter/MLG", - "url": "https://github.com/jkluter/MLG", - "rel": "/software/repository/github/jkluter/MLG", - "avatar": "https://avatars.githubusercontent.com/u/60190328?v=4", - "description": "Microlensing with Gaia", + "uid": "github/SwiftVISA/SwiftVISASwift", + "url": "https://github.com/SwiftVISA/SwiftVISASwift", + "rel": "/software/repository/github/SwiftVISA/SwiftVISASwift", + "avatar": "https://avatars.githubusercontent.com/u/51682419?v=4", + "description": "A Swift backend for communicating to instruments over TCPIP over the VISA protocol.", "topics": [] }, { - "uid": "github/Bgi-LUSH/GPMeta", - "url": "https://github.com/Bgi-LUSH/GPMeta", - "rel": "/software/repository/github/Bgi-LUSH/GPMeta", - "avatar": "https://avatars.githubusercontent.com/u/113886096?v=4", - "description": "A GPU-accelerated method for ultrarapid pathogen identification from metagenomic sequences.", + "uid": "github/umbramortem/nProFit", + "url": "https://github.com/umbramortem/nProFit", + "rel": "/software/repository/github/umbramortem/nProFit", + "avatar": "https://avatars.githubusercontent.com/u/5048671?v=4", + "description": "Tool for analysis of surface brightness profiles", "topics": [] }, { - "uid": "github/VU-BEAM-Lab/GENRE", - "url": "https://github.com/VU-BEAM-Lab/GENRE", - "rel": "/software/repository/github/VU-BEAM-Lab/GENRE", - "avatar": "https://avatars2.githubusercontent.com/u/64437600?v=4", - "description": null, + "uid": "github/igvteam/igv-reports", + "url": "https://github.com/igvteam/igv-reports", + "rel": "/software/repository/github/igvteam/igv-reports", + "avatar": "https://avatars.githubusercontent.com/u/11527111?v=4", + "description": "Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.", "topics": [] }, { - "uid": "github/netsiphd/netrd", - "url": "https://github.com/netsiphd/netrd", - "rel": "/software/repository/github/netsiphd/netrd", - "avatar": "https://avatars.githubusercontent.com/u/46543375?v=4", - "description": "A library for network {reconstruction, distances, dynamics}", + "uid": "github/expressionanalysis/ea-utils", + "url": "https://github.com/ExpressionAnalysis/ea-utils", + "rel": "/software/repository/github/expressionanalysis/ea-utils", + "avatar": "https://avatars.githubusercontent.com/u/13385925?v=4", + "description": "Automatically exported from code.google.com/p/ea-utils", "topics": [] }, { - "uid": "github/fury-gl/fury", - "url": "https://github.com/fury-gl/fury", - "rel": "/software/repository/github/fury-gl/fury", - "avatar": "https://avatars.githubusercontent.com/u/43426015?v=4", - "description": "FURY - Free Unified Rendering in pYthon.", + "uid": "github/abhisrkckl/GWecc", + "url": "https://github.com/abhisrkckl/GWecc", + "rel": "/software/repository/github/abhisrkckl/GWecc", + "avatar": "https://avatars.githubusercontent.com/u/20718391?v=4", + "description": "GWecc is a C++ code that computes the pulsar timing array (PTA) signals induced by eccentric supermassive binaries.", "topics": [ - "scientific-visualization", - "python", - "scriptable-animations", - "hacktoberfest", - "game-engine", - "simulation", - "shaders", - "3d-graphics" + "gravitational-waves", + "pulsars", + "binary-stars", + "astrophysics" ] }, { - "uid": "github/AlanPearl/diffopt", - "url": "https://github.com/AlanPearl/diffopt", - "rel": "/software/repository/github/AlanPearl/diffopt", - "avatar": "https://avatars.githubusercontent.com/u/20649347?v=4", - "description": "Collection of packages aiding in parallelization and optimization of differentiable and many-parameter models", - "topics": [] + "uid": "github/abhisrkckl/Vela.jl", + "url": "https://github.com/abhisrkckl/Vela.jl", + "rel": "/software/repository/github/abhisrkckl/Vela.jl", + "avatar": "https://avatars.githubusercontent.com/u/20718391?v=4", + "description": "A Bayesian pulsar timing and noise analysis package.", + "topics": [ + "astronomy-astrophysics", + "data-analysis", + "pulsars" + ] }, { - "uid": "github/ADAH-EviDENce/evidence", - "url": "https://github.com/ADAH-EviDENce/evidence", - "rel": "/software/repository/github/ADAH-EviDENce/evidence", - "avatar": "https://avatars2.githubusercontent.com/u/37336361?v=4", - "description": "doc2vec-based assisted close reading with support for abstract concept-based search and context-based search", + "uid": "github/Yomguithereal/talisman", + "url": "https://github.com/Yomguithereal/talisman", + "rel": "/software/repository/github/Yomguithereal/talisman", + "avatar": "https://avatars1.githubusercontent.com/u/2571951?v=4", + "description": "Straightforward fuzzy matching, information retrieval and NLP building blocks for JavaScript.", "topics": [ - "corpus", - "close-reading", - "search", - "humanities" + "natural-language-processing", + "machine-learning", + "fuzzy-matching", + "clustering", + "record-linkage", + "information-retrieval", + "deduplication" ] }, { - "uid": "github/shangguandong1996/FindIT2", - "url": "https://github.com/shangguandong1996/FindIT2", - "rel": "/software/repository/github/shangguandong1996/FindIT2", - "avatar": "https://avatars.githubusercontent.com/u/22555126?v=4", - "description": null, + "uid": "github/galizia-lab/pyview", + "url": "https://github.com/galizia-lab/pyview", + "rel": "/software/repository/github/galizia-lab/pyview", + "avatar": "https://avatars.githubusercontent.com/u/89973106?v=4", + "description": "GUI + API for processing and visualizing Calcium imaging data. Largely based on the IDL software \"VIEW\" developed by Giovanni Galizia. Implemented in Python by Ajayrama Kumaraswamy", "topics": [] }, { - "uid": "github/TriPed-Robot/TriP", - "url": "https://github.com/TriPed-Robot/trip_kinematics", - "rel": "/software/repository/github/TriPed-Robot/TriP", - "avatar": "https://avatars.githubusercontent.com/u/69719827?v=4", - "description": "Python package for inverse kinematic calculations of hybrid serial parallel robots", + "uid": "github/Kuifje02/vrpy", + "url": "https://github.com/Kuifje02/vrpy", + "rel": "/software/repository/github/Kuifje02/vrpy", + "avatar": "https://avatars0.githubusercontent.com/u/19840033?v=4", + "description": "A python framework for solving the VRP and its variants with column generation.", "topics": [ + "optimization", + "cspy", + "column-generation", + "vrp", + "cvrp", + "vrptw", "python", - "robotics", - "kinematics", - "inverse-kinematics", - "kinematic-modeling", - "hybrid-chain", - "closed-chain", - "manipulator", - "trajectory-planning", - "parallel-robot", - "serial-robotics" + "networkx", + "pulp", + "coinor" ] }, { - "uid": "github/mperezcarrasco/AnomalyALeRCE", - "url": "https://github.com/mperezcarrasco/AnomalyALeRCE", - "rel": "/software/repository/github/mperezcarrasco/AnomalyALeRCE", - "avatar": "https://avatars.githubusercontent.com/u/26337065?v=4", - "description": "Anomaly Detector for ALeRCE broker \ud83e\udd16", - "topics": [] - }, - { - "uid": "github/SAIL-Labs/AMICAL", - "url": "https://github.com/SAIL-Labs/AMICAL", - "rel": "/software/repository/github/SAIL-Labs/AMICAL", - "avatar": "https://avatars.githubusercontent.com/u/19316639?v=4", - "description": "Extraction pipeline and analysis tools for Aperture Masking Interferometry mode of the last generation of instruments (ground-based and space).", + "uid": "github/alan-turing-institute/Palaeoanalytics", + "url": "https://github.com/alan-turing-institute/Palaeoanalytics", + "rel": "/software/repository/github/alan-turing-institute/Palaeoanalytics", + "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", + "description": "Repository for the Paleoanalytics project.", "topics": [ - "instrumentation", - "pipelines", - "interferometry", - "data-processing", - "jwst", - "eso-vlt" + "hut23", + "hut23-530" ] }, { - "uid": "github/NielsenBerkeleyLab/sconce", - "url": "https://github.com/NielsenBerkeleyLab/sconce", - "rel": "/software/repository/github/NielsenBerkeleyLab/sconce", - "avatar": "https://avatars.githubusercontent.com/u/33462730?v=4", - "description": null, - "topics": [] + "uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", + "url": "https://github.com/alan-turing-institute/monitoring-ecosystem-resilience", + "rel": "/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", + "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", + "description": "Repository for mini-projects in the Data science for Sustainable development project ", + "topics": [ + "hut23", + "hut23-240" + ] }, { - "uid": "github/heliopython/heliopy", - "url": "https://github.com/heliopython/heliopy", - "rel": "/software/repository/github/heliopython/heliopy", - "avatar": "https://avatars.githubusercontent.com/u/24206439?v=4", - "description": "Python for heliospheric and planetary physics", + "uid": "github/alan-turing-institute/setvis", + "url": "https://github.com/alan-turing-institute/setvis", + "rel": "/software/repository/github/alan-turing-institute/setvis", + "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", + "description": "A tool for visualising set membership and patterns of missingness in data", "topics": [ - "space-physics", + "hut23", + "hut23-845", + "bokeh", + "jupyter-notebook", + "missing-data", "python", - "physics" + "set-visualization" ] }, { - "uid": "github/pierrebarbera/epa-ng", - "url": "https://github.com/pierrebarbera/epa-ng", - "rel": "/software/repository/github/pierrebarbera/epa-ng", - "avatar": "https://avatars.githubusercontent.com/u/6584572?v=4", - "description": "Massively parallel phylogenetic placement of genetic sequences", + "uid": "github/alan-turing-institute/MLJ.jl", + "url": "https://github.com/alan-turing-institute/MLJ.jl", + "rel": "/software/repository/github/alan-turing-institute/MLJ.jl", + "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", + "description": "A Julia machine learning framework", "topics": [ - "phylogenetics", - "bioinformatics", - "taxonomic-classification", - "mpi", - "openmp", - "mpi-io", - "placement" + "machine-learning", + "julia", + "pipelines", + "tuning", + "data-science", + "tuning-parameters", + "predictive-modeling", + "classification", + "regression", + "statistics", + "clustering", + "stacking", + "ensemble-learning", + "pipeline" ] }, { - "uid": "github/zpenoyre/CausticFrog", - "url": "https://github.com/zpenoyre/CausticFrog", - "rel": "/software/repository/github/zpenoyre/CausticFrog", - "avatar": "https://avatars.githubusercontent.com/u/20628747?v=4", - "description": "1D Lagrangian Simulation Package", - "topics": [] + "uid": "github/alan-turing-institute/autoemulate", + "url": "https://github.com/alan-turing-institute/autoemulate", + "rel": "/software/repository/github/alan-turing-institute/autoemulate", + "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", + "description": "Emulate simulations easily", + "topics": [ + "hut23", + "hut23-1468" + ] }, { - "uid": "github/zpenoyre/OoT", - "url": "https://github.com/zpenoyre/OoT", - "rel": "/software/repository/github/zpenoyre/OoT", - "avatar": "https://avatars.githubusercontent.com/u/20628747?v=4", - "description": "Out-of-Transit Light Curve Generator", + "uid": "github/alan-turing-institute/DetectorChecker", + "url": "https://github.com/alan-turing-institute/DetectorChecker", + "rel": "/software/repository/github/alan-turing-institute/DetectorChecker", + "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", + "description": " Project to develop software to assess developing detector screen damage (Web App based on the original DetectorChecker package)", + "topics": [ + "hut23", + "hut23-122" + ] + }, + { + "uid": "github/standage/AEGeAn", + "url": "https://github.com/standage/AEGeAn", + "rel": "/software/repository/github/standage/AEGeAn", + "avatar": "https://avatars.githubusercontent.com/u/566823?v=4", + "description": "Integrated toolkit for analysis and evaluation of annotated genomes", "topics": [] }, { - "uid": "github/tmcclintock/cluster_toolkit", - "url": "https://github.com/tmcclintock/cluster_toolkit", - "rel": "/software/repository/github/tmcclintock/cluster_toolkit", - "avatar": "https://avatars.githubusercontent.com/u/10226392?v=4", - "description": "Tools for analyzing galaxy clusters.", + "uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", + "url": "https://github.com/earth-metabolome-initiative/earth_metabolome_ontology", + "rel": "/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", + "avatar": "https://avatars.githubusercontent.com/u/121333592?v=4", + "description": "The Earth Metabolome Initiative Ontology. The Earth Metabolome Initiative (EMI, https://www.earthmetabolome.org/ ) is a global effort to profile the metabolic content of all currently known species on our planet.", "topics": [ - "cosmology", - "galaxy-clusters", - "simulations", - "numerical-calculations" + "metabolomics", + "ontology", + "owl-ontology", + "plants", + "rdf" ] }, { - "uid": "github/tmcclintock/AReconstructionTool", - "url": "https://github.com/tmcclintock/AReconstructionTool", - "rel": "/software/repository/github/tmcclintock/AReconstructionTool", - "avatar": "https://avatars.githubusercontent.com/u/10226392?v=4", - "description": "ART: A Reconstruction Tool. For reconstructing probability distributions using Gaussian processes.", + "uid": "github/eScatter/pyelsepa", + "url": "https://github.com/eScatter/pyelsepa", + "rel": "/software/repository/github/eScatter/pyelsepa", + "avatar": "https://avatars0.githubusercontent.com/u/18676359?v=4", + "description": "A Python wrapper for ELSEPA", "topics": [] }, { - "uid": "github/fpavogt/fcmaker", - "url": "https://github.com/fpavogt/fcmaker", - "rel": "/software/repository/github/fpavogt/fcmaker", - "avatar": "https://avatars.githubusercontent.com/u/13974615?v=4", - "description": "An automated finding-chart-making program for Observing Blocks on p2.", + "uid": "github/JeremyLezmy/hypergal", + "url": "https://github.com/JeremyLezmy/hypergal", + "rel": "/software/repository/github/JeremyLezmy/hypergal", + "avatar": "https://avatars.githubusercontent.com/u/49833410?v=4", + "description": "Pipeline for supernovae extraction and classification within the SEDm/ZTF project.", "topics": [] }, { - "uid": "github/fpavogt/E0102-VR", - "url": "https://github.com/fpavogt/E0102-VR", - "rel": "/software/repository/github/fpavogt/E0102-VR", - "avatar": "https://avatars.githubusercontent.com/u/13974615?v=4", - "description": "An experimental VR application to visualize the 3D map of the oxygen-bright ejecta in SNR 1E 0102.2-7219", + "uid": "github/mariogrs/Simfast21", + "url": "https://github.com/mariogrs/Simfast21", + "rel": "/software/repository/github/mariogrs/Simfast21", + "avatar": "https://avatars.githubusercontent.com/u/7955603?v=4", + "description": "21cm code", "topics": [] }, { - "uid": "github/PRIDE-Archive/pridepy", - "url": "https://github.com/PRIDE-Archive/pridepy", - "rel": "/software/repository/github/PRIDE-Archive/pridepy", - "avatar": "https://avatars.githubusercontent.com/u/10128554?v=4", - "description": "Python client for PRIDE Archive Rest API. ", - "topics": [ - "pride-database", - "pride", - "python", - "proteomics", - "mass-spectrometry", - "python-client" - ] + "uid": "github/Filter-Bubble/stroll", + "url": "https://github.com/Filter-Bubble/stroll", + "rel": "/software/repository/github/Filter-Bubble/stroll", + "avatar": "https://avatars.githubusercontent.com/u/42996958?v=4", + "description": "Graph based Sematic Role Labeller", + "topics": [] }, { - "uid": "github/ReSurfEMG/ReSurfEMG", - "url": "https://github.com/ReSurfEMG/ReSurfEMG", - "rel": "/software/repository/github/ReSurfEMG/ReSurfEMG", - "avatar": "https://avatars.githubusercontent.com/u/107040410?v=4", - "description": "An open source library for analysis of respiratory EMG", - "topics": [ - "electromyogram", - "electromyography", - "healthcare-analysis" - ] + "uid": "github/Filter-Bubble/e2e-Dutch", + "url": "https://github.com/Filter-Bubble/e2e-Dutch", + "rel": "/software/repository/github/Filter-Bubble/e2e-Dutch", + "avatar": "https://avatars.githubusercontent.com/u/42996958?v=4", + "description": "Code for e2e coref model in Dutch", + "topics": [] }, { - "uid": "github/STEllAR-GROUP/octotiger", - "url": "https://github.com/STEllAR-GROUP/octotiger", - "rel": "/software/repository/github/STEllAR-GROUP/octotiger", - "avatar": "https://avatars.githubusercontent.com/u/1780988?v=4", - "description": "Astrophysics program simulating the evolution of star systems based on the fast multipole method on adaptive Octrees", + "uid": "github/goualard-f/MicroFloatingPoints.jl", + "url": "https://github.com/goualard-f/MicroFloatingPoints.jl", + "rel": "/software/repository/github/goualard-f/MicroFloatingPoints.jl", + "avatar": "https://avatars.githubusercontent.com/u/26631692?v=4", + "description": "A Julia package to manipulate very small IEEE 754 standard-compliant floating-point numbers.", "topics": [ - "astrophysics", - "hpx", - "cuda-kernels", - "cuda", - "stellar-mergers" + "floating-point", + "ieee-754" ] }, { - "uid": "github/STEllAR-GROUP/hpx", - "url": "https://github.com/STEllAR-GROUP/hpx", - "rel": "/software/repository/github/STEllAR-GROUP/hpx", - "avatar": "https://avatars1.githubusercontent.com/u/1780988?v=4", - "description": "The C++ Standard Library for Parallelism and Concurrency", + "uid": "github/FofanovLab/mtsv_tools", + "url": "https://github.com/FofanovLab/mtsv_tools", + "rel": "/software/repository/github/FofanovLab/mtsv_tools", + "avatar": "https://avatars.githubusercontent.com/u/33037734?v=4", + "description": "Core metagenomic binning tools for mtsv", + "topics": [] + }, + { + "uid": "github/TheMillerLab/genetex", + "url": "https://github.com/TheMillerLab/genetex", + "rel": "/software/repository/github/TheMillerLab/genetex", + "avatar": "https://avatars.githubusercontent.com/u/80731901?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/cb-geo/mpm", + "url": "https://github.com/cb-geo/mpm", + "rel": "/software/repository/github/cb-geo/mpm", + "avatar": "https://avatars2.githubusercontent.com/u/7850930?v=4", + "description": "CB-Geo High-Performance Material Point Method", "topics": [ - "c-plus-plus", - "distributed", - "cross-platform", - "parallelism", - "concurrency", - "cpp" + "mpm", + "material-point-method", + "parallel", + "high-performance-computing" ] }, { - "uid": "github/cicirello/rho-mu", - "url": "https://github.com/cicirello/rho-mu", - "rel": "/software/repository/github/cicirello/rho-mu", - "avatar": "https://avatars.githubusercontent.com/u/762030?v=4", - "description": "\u03c1\u03bc - a Java library of Randomization enHancements and Other Math Utilities", + "uid": "github/ruanjue/wtdbg2", + "url": "https://github.com/ruanjue/wtdbg2", + "rel": "/software/repository/github/ruanjue/wtdbg2", + "avatar": "https://avatars1.githubusercontent.com/u/16264260?v=4", + "description": "Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly", "topics": [ - "randomizer", - "randomization", - "gaussian", - "cauchy", - "binomial", - "pseudorandom", - "random-numbers" + "pacbio", + "nanopore", + "assembly", + "alignment" ] }, { - "uid": "github/cicirello/Chips-n-Salsa", - "url": "https://github.com/cicirello/Chips-n-Salsa", - "rel": "/software/repository/github/cicirello/Chips-n-Salsa", - "avatar": "https://avatars3.githubusercontent.com/u/762030?v=4", - "description": "Chips-n-Salsa - A Java library of customizable, hybridizable, iterative, parallel, stochastic, and self-adaptive local search algorithms", + "uid": "github/mikaelLEROY/AxionNS_RayTracing", + "url": "https://github.com/mikaelLEROY/AxionNS_RayTracing", + "rel": "/software/repository/github/mikaelLEROY/AxionNS_RayTracing", + "avatar": "https://avatars.githubusercontent.com/u/31671771?v=4", + "description": null, "topics": [] }, { - "uid": "github/VeinsOfTheEarth/rabpro", - "url": "https://github.com/VeinsOfTheEarth/rabpro", - "rel": "/software/repository/github/VeinsOfTheEarth/rabpro", - "avatar": "https://avatars.githubusercontent.com/u/88787335?v=4", - "description": "River and basin profiler", + "uid": "github/mkplummer/Imber", + "url": "https://github.com/mkplummer/Imber", + "rel": "/software/repository/github/mkplummer/Imber", + "avatar": "https://avatars.githubusercontent.com/u/80552610?v=4", + "description": "Python module for both numerical simulation of stellar/substellar surfaces and fitting the resulting spectral line profiles and photometric light curves with analytical models.", + "topics": [] + }, + { + "uid": "github/graphnet-team/graphnet", + "url": "https://github.com/graphnet-team/graphnet", + "rel": "/software/repository/github/graphnet-team/graphnet", + "avatar": "https://avatars.githubusercontent.com/u/113602637?v=4", + "description": "Graph neural networks for neutrino telescope event reconstruction", "topics": [ + "astrophysics", + "deep-learning", + "gpu", + "high-energy-physics", + "machine-learning", + "neural-network", + "particle-physics", + "physics-analysis", "python", - "manuscript" + "pytorch", + "neutrino-oscillations", + "neutrino-physics", + "neutrinos", + "graph-neural-network" ] }, { - "uid": "github/deeprob/ThioesteraseEnzymeSpecificity", - "url": "https://github.com/deeprob/ThioesteraseEnzymeSpecificity", - "rel": "/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", - "avatar": "https://avatars.githubusercontent.com/u/42780724?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/CMC-lab/TranCIT", - "url": "https://github.com/CMC-lab/TranCIT", - "rel": "/software/repository/github/CMC-lab/TranCIT", - "avatar": "https://avatars.githubusercontent.com/u/149275802?v=4", - "description": "Transient Causal Interaction estimator", - "topics": [] + "uid": "github/alchemistry/alchemlyb", + "url": "https://github.com/alchemistry/alchemlyb", + "rel": "/software/repository/github/alchemistry/alchemlyb", + "avatar": "https://avatars.githubusercontent.com/u/19521918?v=4", + "description": "the simple alchemistry library", + "topics": [ + "science", + "free-energy", + "python", + "library", + "molecular-dynamics" + ] }, { - "uid": "github/keatonb/Pyriod", - "url": "https://github.com/keatonb/Pyriod", - "rel": "/software/repository/github/keatonb/Pyriod", - "avatar": "https://avatars.githubusercontent.com/u/6413923?v=4", - "description": "Python implementation of basic period detection and fitting routines for astronomical time series.", + "uid": "github/temken/DaMaSCUS-SUN", + "url": "https://github.com/temken/DaMaSCUS-SUN", + "rel": "/software/repository/github/temken/DaMaSCUS-SUN", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "Dark Matter Simulation Code for Underground Scatterings - Sun Edition", "topics": [] }, { - "uid": "github/keatonb/TESS_PRF", - "url": "https://github.com/keatonb/TESS_PRF", - "rel": "/software/repository/github/keatonb/TESS_PRF", - "avatar": "https://avatars.githubusercontent.com/u/6413923?v=4", - "description": "Tools to display the TESS pixel response function (PRF) at any location on the detector", - "topics": [] + "uid": "github/temken/obscura", + "url": "https://github.com/temken/obscura", + "rel": "/software/repository/github/temken/obscura", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "A modular C++ tool and library for dark matter direct detection computations for both nuclear and electron recoil experiments.", + "topics": [ + "direct-detection-experiments", + "dark-matter" + ] }, { - "uid": "github/vpc-ccg/svict", - "url": "https://github.com/vpc-ccg/svict", - "rel": "/software/repository/github/vpc-ccg/svict", - "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", - "description": "Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA", + "uid": "github/temken/DarkARC", + "url": "https://github.com/temken/DarkARC", + "rel": "/software/repository/github/temken/DarkARC", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "Dark Matter-induced Atomic Response Code (DarkARC) - A python tool for the calculation and tabulation of atomic response functions for ionization via dark matter-electron scatterings.", "topics": [ - "paired-end-sequencing", - "structural-variation", - "liquid-biopsy" + "darkmatter", + "atomic-physics", + "directdetection", + "physics" ] }, { - "uid": "github/vpc-ccg/genion", - "url": "https://github.com/vpc-ccg/genion", - "rel": "/software/repository/github/vpc-ccg/genion", - "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", - "description": "GENe fusION", + "uid": "github/temken/Dirac_vs_Majorana", + "url": "https://github.com/temken/Dirac_vs_Majorana", + "rel": "/software/repository/github/temken/Dirac_vs_Majorana", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "Statistical discrimination of sub-GeV Majorana and Dirac dark matter at direct detection experiments.", "topics": [] }, { - "uid": "github/vpc-ccg/calib", - "url": "https://github.com/vpc-ccg/calib", - "rel": "/software/repository/github/vpc-ccg/calib", - "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", - "description": "clusters paired-end reads using their barcodes and sequences.", + "uid": "github/temken/DaMaSCUS-CRUST", + "url": "https://github.com/temken/DaMaSCUS-CRUST", + "rel": "/software/repository/github/temken/DaMaSCUS-CRUST", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "Dark Matter Simulation Code for Underground Scatterings - Crust Edition", "topics": [ - "tagged-reads", - "barcode-sequencing", - "clustering", - "paired-end-sequencing", - "liquid-biopsy" + "dark-matter", + "montecarlo-simulation", + "simulation", + "physics-simulation", + "particle-physics", + "trajectory-simulator", + "astroparticle-physics" ] }, { - "uid": "github/reality/klarigi", - "url": "https://github.com/reality/klarigi", - "rel": "/software/repository/github/reality/klarigi", - "avatar": "https://avatars.githubusercontent.com/u/223469?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/SMTG-Bham/doped", - "url": "https://github.com/SMTG-Bham/doped", - "rel": "/software/repository/github/SMTG-Bham/doped", - "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", - "description": "doped is a Python software for the generation, pre-/post-processing and analysis of defect supercell calculations, implementing the defect simulation workflow in an efficient, reproducible, user-friendly yet powerful and fully-customisable manner.", + "uid": "github/temken/DaMaSCUS", + "url": "https://github.com/temken/DaMaSCUS", + "rel": "/software/repository/github/temken/DaMaSCUS", + "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", + "description": "Dark Matter Simulation Code for Underground Scatterings", "topics": [ - "ab-initio", - "computational-chemistry", - "computational-materials-science", - "defect-formation-energy", - "defects", - "dft", - "doping", - "fermi-level", - "point-defects", - "pymatgen", - "semiconductors", - "vasp", - "defect-calculation", - "defect-levels", - "defect-thermodynamics", - "shakenbreak", - "transition-levels" + "montecarlo-simulation", + "directdetection", + "trajectory-simulator", + "particle-physics", + "dark-matter", + "astroparticle-physics" ] }, { - "uid": "github/SMTG-Bham/ThermoParser", - "url": "https://github.com/SMTG-Bham/ThermoParser", - "rel": "/software/repository/github/SMTG-Bham/ThermoParser", - "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", - "description": "A tool for streamlining data analysis and visualisation for thermoelectrics and charge carrier transport in computational materials science.", + "uid": "github/N-Wouda/ALNS", + "url": "https://github.com/N-Wouda/ALNS", + "rel": "/software/repository/github/N-Wouda/ALNS", + "avatar": "https://avatars.githubusercontent.com/u/16272507?v=4", + "description": "Adaptive large neighbourhood search (and more!) in Python.", "topics": [ - "thermoelectric", - "chemistry", - "physics", - "materials", - "science", - "materials-science", - "plotting", - "tp", - "matplotlib", + "adaptive-large-neighbourhood-search", + "alns", + "metaheuristic", + "operations-research", "python", - "computational-chemistry", - "computational-materials-science" + "travelling-salesman-problem", + "cutting-stock-problem", + "vehicle-routing-problem", + "rcpsp", + "scheduling-problem", + "tsp", + "vrp", + "flow-shop" ] }, { - "uid": "github/matthiaslee/Xmatch", - "url": "https://github.com/matthiaslee/Xmatch", - "rel": "/software/repository/github/matthiaslee/Xmatch", - "avatar": "https://avatars.githubusercontent.com/u/1522304?v=4", - "description": "a GPU accelerated astronomic catalog cross-matching tool", + "uid": "github/qtltools/qtltools", + "url": "https://github.com/qtltools/qtltools", + "rel": "/software/repository/github/qtltools/qtltools", + "avatar": "https://avatars.githubusercontent.com/u/20395337?v=4", + "description": "A complete tool set for molecular QTL discovery and analysis", "topics": [] }, { - "uid": "github/osallou/cassiopee-c", - "url": "https://github.com/osallou/cassiopee-c", - "rel": "/software/repository/github/osallou/cassiopee-c", - "avatar": "https://avatars.githubusercontent.com/u/1024098?v=4", - "description": "Cassiopee index and search library C implementation", + "uid": "github/lkreidberg/batman", + "url": "https://github.com/lkreidberg/batman", + "rel": "/software/repository/github/lkreidberg/batman", + "avatar": "https://avatars.githubusercontent.com/u/1859463?v=4", + "description": "Fast transit light curves models in Python.", "topics": [] }, { - "uid": "github/openmsr/CAD_to_OpenMC", - "url": "https://github.com/openmsr/CAD_to_OpenMC", - "rel": "/software/repository/github/openmsr/CAD_to_OpenMC", - "avatar": "https://avatars.githubusercontent.com/u/36203476?v=4", - "description": "code to target the conversion from a step-file to a h5m-geometry for neutronics ", + "uid": "github/idruglab/hignn", + "url": "https://github.com/idrugLab/hignn", + "rel": "/software/repository/github/idruglab/hignn", + "avatar": "https://avatars.githubusercontent.com/u/58386268?v=4", + "description": "Code for \"HiGNN: A Hierarchical Informative Graph Neural Network for Molecular Property Prediction Equipped with Feature-Wise Attention\"", "topics": [] }, { - "uid": "github/liuhao-cn/fastSHT", - "url": "https://github.com/liuhao-cn/fastSHT", - "rel": "/software/repository/github/liuhao-cn/fastSHT", - "avatar": "https://avatars.githubusercontent.com/u/31798291?v=4", - "description": "Fast Spherical Harmonic Transforms for a large number of sky maps", - "topics": [ - "gpu-computing", - "spherical-harmonics", - "cosmic-microwave-background" - ] + "uid": "github/volkamerlab/opencadd", + "url": "https://github.com/volkamerlab/opencadd", + "rel": "/software/repository/github/volkamerlab/opencadd", + "avatar": "https://avatars.githubusercontent.com/u/44878588?v=4", + "description": "A Python library for structural cheminformatics", + "topics": [] }, { - "uid": "github/lucadimascolo/socca", - "url": "https://github.com/lucadimascolo/socca", - "rel": "/software/repository/github/lucadimascolo/socca", - "avatar": "https://avatars.githubusercontent.com/u/18384197?v=4", - "description": "Source Characterization using a Composable Analysis", + "uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", + "url": "https://github.com/FZJ-IEK3-VSA/LoadProfileGenerator", + "rel": "/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", + "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", + "description": "Program for generating load curves for residential consumers. Agentbased and extremly detailed.", "topics": [] }, { - "uid": "github/mpi4py/shmem4py", - "url": "https://github.com/mpi4py/shmem4py", - "rel": "/software/repository/github/mpi4py/shmem4py", - "avatar": "https://avatars.githubusercontent.com/u/5232933?v=4", - "description": null, + "uid": "github/FZJ-IEK3-VSA/FINE", + "url": "https://github.com/FZJ-IEK3-VSA/FINE", + "rel": "/software/repository/github/FZJ-IEK3-VSA/FINE", + "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", + "description": "The ETHOS.FINE python package provides a framework for modeling, optimizing and assessing energy systems", "topics": [] }, { - "uid": "github/ICESat2-SlideRule/paper", - "url": "https://github.com/ICESat2-SlideRule/paper", - "rel": "/software/repository/github/ICESat2-SlideRule/paper", - "avatar": "https://avatars.githubusercontent.com/u/63428847?v=4", - "description": "JOSS paper materials", + "uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", + "url": "https://github.com/FZJ-IEK3-VSA/ETHOS_PeNALPS", + "rel": "/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", + "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", + "description": "Petri Net Agent based Load Profile Simulator", "topics": [] }, { - "uid": "github/ebundhoo/TAGOPSIN", - "url": "https://github.com/ebundhoo/TAGOPSIN", - "rel": "/software/repository/github/ebundhoo/TAGOPSIN", - "avatar": "https://avatars.githubusercontent.com/u/44093400?v=4", - "description": "Data(base) integration using the data warehousing approach", + "uid": "github/SCECcode/pycsep", + "url": "https://github.com/SCECcode/pycsep", + "rel": "/software/repository/github/SCECcode/pycsep", + "avatar": "https://avatars.githubusercontent.com/u/8519819?v=4", + "description": "Tools to help earthquake forecast model developers build and evaluate their forecasts", "topics": [] }, { - "uid": "github/gbrammer/unicorn", - "url": "https://github.com/gbrammer/unicorn", - "rel": "/software/repository/github/gbrammer/unicorn", - "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", - "description": "Full 3D-HST grism pipeline", + "uid": "github/mkelley/zchecker", + "url": "https://github.com/mkelley/zchecker", + "rel": "/software/repository/github/mkelley/zchecker", + "avatar": "https://avatars.githubusercontent.com/u/1138643?v=4", + "description": "ZTF moving target checker for short lists of moving targets", "topics": [] }, { - "uid": "github/gbrammer/grizli", - "url": "https://github.com/gbrammer/grizli", - "rel": "/software/repository/github/gbrammer/grizli", - "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", - "description": "Grizli: The \"Grism redshift and line\" analysis software", + "uid": "github/mkelley/calviacat", + "url": "https://github.com/mkelley/calviacat", + "rel": "/software/repository/github/mkelley/calviacat", + "avatar": "https://avatars.githubusercontent.com/u/1138643?v=4", + "description": "Calibrate star photometry by comparison to a catalog.", "topics": [] }, { - "uid": "github/gbrammer/threedhst", - "url": "https://github.com/gbrammer/threedhst", - "rel": "/software/repository/github/gbrammer/threedhst", - "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", - "description": "3D-HST grism analysis software", + "uid": "github/qiime2/q2-vsearch", + "url": "https://github.com/qiime2/q2-vsearch", + "rel": "/software/repository/github/qiime2/q2-vsearch", + "avatar": "https://avatars.githubusercontent.com/u/18176583?v=4", + "description": "vsearch plugin for QIIME 2", + "topics": [ + "hacktoberfest" + ] + }, + { + "uid": "github/megbedell/wobble", + "url": "https://github.com/megbedell/wobble", + "rel": "/software/repository/github/megbedell/wobble", + "avatar": "https://avatars.githubusercontent.com/u/13722237?v=4", + "description": "precise data-driven RV fitting, now with tellurics!", + "topics": [ + "astronomy", + "spectroscopy", + "exoplanet-radial-velocities", + "tensorflow" + ] + }, + { + "uid": "github/bobleesj/cifkit", + "url": "https://github.com/bobleesj/cifkit", + "rel": "/software/repository/github/bobleesj/cifkit", + "avatar": "https://avatars.githubusercontent.com/u/14892262?v=4", + "description": "High-throughput .cif analysis made easy. Visit: https://bobleesj.github.io/cifkit/", + "topics": [ + "coordination-number", + "crystallography", + "high-throughput", + "site-analysis", + "solid-state" + ] + }, + { + "uid": "github/alastair-droop/fqtools", + "url": "https://github.com/alastair-droop/fqtools", + "rel": "/software/repository/github/alastair-droop/fqtools", + "avatar": "https://avatars.githubusercontent.com/u/13238060?v=4", + "description": "An efficient FASTQ manipulation suite", + "topics": [ + "fastq", + "fastq-files", + "next-generation-sequencing", + "bioinformatics" + ] + }, + { + "uid": "github/YuSugihara/MutMap", + "url": "https://github.com/YuSugihara/MutMap", + "rel": "/software/repository/github/YuSugihara/MutMap", + "avatar": "https://avatars.githubusercontent.com/u/34593586?v=4", + "description": "MutMap pipeline to identify causative mutations responsible for a phenotype", "topics": [] }, { - "uid": "github/MD-Studio/MDStudio", - "url": "https://github.com/MD-Studio/MDStudio", - "rel": "/software/repository/github/MD-Studio/MDStudio", - "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", - "description": "A general framework for microservice based distributed applications", + "uid": "github/ipython/ipython", + "url": "https://github.com/ipython/ipython", + "rel": "/software/repository/github/ipython/ipython", + "avatar": "https://avatars3.githubusercontent.com/u/230453?v=4", + "description": "Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.", "topics": [ + "ipython", + "jupyter", + "data-science", + "notebook", "python", - "crossbar", - "microservice-framework", - "science", - "scientific-computing", - "molecular-dynamics" + "repl" ] }, { - "uid": "github/MD-Studio/cerise", - "url": "https://github.com/MD-Studio/cerise", - "rel": "/software/repository/github/MD-Studio/cerise", - "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", - "description": "A REST service for running CWL workflows on remote clusters", + "uid": "github/halomod/halomod", + "url": "https://github.com/halomod/halomod", + "rel": "/software/repository/github/halomod/halomod", + "avatar": "https://avatars.githubusercontent.com/u/78101746?v=4", + "description": "Python package for dealing with the Halo Model", "topics": [] }, { - "uid": "github/MD-Studio/cerulean", - "url": "https://github.com/MD-Studio/cerulean", - "rel": "/software/repository/github/MD-Studio/cerulean", - "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", - "description": "A Python 3 library for talking to HPC clusters and supercomputers", + "uid": "github/halomod/hmf", + "url": "https://github.com/halomod/hmf", + "rel": "/software/repository/github/halomod/hmf", + "avatar": "https://avatars.githubusercontent.com/u/78101746?v=4", + "description": "Python halo mass function calculator", "topics": [] }, { - "uid": "github/gpertea/cdbfasta", - "url": "https://github.com/gpertea/cdbfasta", - "rel": "/software/repository/github/gpertea/cdbfasta", - "avatar": "https://avatars.githubusercontent.com/u/3372619?v=4", - "description": "Constant DataBase tools for indexing and retrieving records from multi-FASTA or similarly structured files", - "topics": [] + "uid": "github/OFFIS-DAI/Mango.jl", + "url": "https://github.com/OFFIS-DAI/Mango.jl", + "rel": "/software/repository/github/OFFIS-DAI/Mango.jl", + "avatar": "https://avatars.githubusercontent.com/u/148066510?v=4", + "description": "Modular Julia-based agent framework to implement multi-agent systems", + "topics": [ + "agent", + "distributed-computing", + "multi-agent-systems", + "agent-based", + "agent-based-simulation", + "agent-based-control" + ] }, { - "uid": "github/gpertea/gclib", - "url": "https://github.com/gpertea/gclib", - "rel": "/software/repository/github/gpertea/gclib", - "avatar": "https://avatars.githubusercontent.com/u/3372619?v=4", - "description": "GCLib - Genomic C++ library of reusable code for bioinformatics projects", + "uid": "github/zclaytor/kiauhoku", + "url": "https://github.com/zclaytor/kiauhoku", + "rel": "/software/repository/github/zclaytor/kiauhoku", + "avatar": "https://avatars.githubusercontent.com/u/32207846?v=4", + "description": "Python utilities for stellar model grid interpolation", "topics": [] }, { - "uid": "github/yiwenstat/MCPCA_PopGen", - "url": "https://github.com/yiwenstat/MCPCA_PopGen", - "rel": "/software/repository/github/yiwenstat/MCPCA_PopGen", - "avatar": "https://avatars.githubusercontent.com/u/44883065?v=4", - "description": null, + "uid": "github/zclaytor/butterpy", + "url": "https://github.com/zclaytor/butterpy", + "rel": "/software/repository/github/zclaytor/butterpy", + "avatar": "https://avatars.githubusercontent.com/u/32207846?v=4", + "description": "Python simulations of stellar butterfly diagrams and rotational light curves", "topics": [] }, { - "uid": "github/martinjameswhite/ZeldovichRecon", - "url": "https://github.com/martinjameswhite/ZeldovichRecon", - "rel": "/software/repository/github/martinjameswhite/ZeldovichRecon", - "avatar": "https://avatars.githubusercontent.com/u/5226247?v=4", - "description": "Code to compute the post-reconstruction halo correlation function using the Zeldovich approximation.", + "uid": "github/BayraktarLab/cell2location", + "url": "https://github.com/BayraktarLab/cell2location", + "rel": "/software/repository/github/BayraktarLab/cell2location", + "avatar": "https://avatars.githubusercontent.com/u/65139298?v=4", + "description": "Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)", "topics": [] }, { - "uid": "github/martinjameswhite/directsht", - "url": "https://github.com/martinjameswhite/directsht", - "rel": "/software/repository/github/martinjameswhite/directsht", - "avatar": "https://avatars.githubusercontent.com/u/5226247?v=4", - "description": "Direct spherical harmonic transform code for point sets on the sphere.", + "uid": "github/GaryBAYLOR/mixR", + "url": "https://github.com/GaryBAYLOR/mixR", + "rel": "/software/repository/github/GaryBAYLOR/mixR", + "avatar": "https://avatars.githubusercontent.com/u/12647683?v=4", + "description": "R package for fitting finite mixture models for both raw and binned data", "topics": [] }, { - "uid": "github/lanzen/ampliconnoise", - "url": "https://github.com/lanzen/ampliconnoise", - "rel": "/software/repository/github/lanzen/ampliconnoise", - "avatar": "https://avatars.githubusercontent.com/u/7382097?v=4", - "description": "Automatically exported from code.google.com/p/ampliconnoise", - "topics": [] + "uid": "github/unibe-icelab/thz-image-explorer", + "url": "https://github.com/unibe-icelab/thz-image-explorer", + "rel": "/software/repository/github/unibe-icelab/thz-image-explorer", + "avatar": "https://avatars.githubusercontent.com/u/193905551?v=4", + "description": "THz Image Explorer is an application for THz time-domain image analysis.", + "topics": [ + "analysis", + "rust", + "thz", + "thz-tds" + ] }, { - "uid": "github/wtsi-hpag/HiLine", - "url": "https://github.com/wtsi-hpag/HiLine", - "rel": "/software/repository/github/wtsi-hpag/HiLine", - "avatar": "https://avatars.githubusercontent.com/u/33829550?v=4", - "description": "HiC alignment and classification pipeline", + "uid": "github/smirarab/pasta", + "url": "https://github.com/smirarab/pasta", + "rel": "/software/repository/github/smirarab/pasta", + "avatar": "https://avatars.githubusercontent.com/u/826296?v=4", + "description": "PASTA (Practical Alignment using SATe and Transitivity) ", "topics": [] }, { - "uid": "github/pysam-developers/pysam", - "url": "https://github.com/pysam-developers/pysam", - "rel": "/software/repository/github/pysam-developers/pysam", - "avatar": "https://avatars.githubusercontent.com/u/6598771?v=4", - "description": "Pysam is a Python module for reading and manipulating SAM/BAM/VCF/BCF files. It's a lightweight wrapper of the htslib C-API, the same one that powers samtools, bcftools, and tabix.", + "uid": "github/smirarab/sepp", + "url": "https://github.com/smirarab/sepp", + "rel": "/software/repository/github/smirarab/sepp", + "avatar": "https://avatars.githubusercontent.com/u/826296?v=4", + "description": "Ensemble of HMM methods (SEPP, TIPP, UPP)", "topics": [] }, { - "uid": "github/astrorama/sourcextractorplusplus", - "url": "https://github.com/astrorama/SourceXtractorPlusPlus", - "rel": "/software/repository/github/astrorama/sourcextractorplusplus", - "avatar": "https://avatars.githubusercontent.com/u/48352705?v=4", - "description": "SourceXtractor++, the next generation SExtractor", - "topics": [ - "astronomy", - "c-plus-plus", - "science", - "model-fitting" - ] + "uid": "github/joshuakt/Oxygen-False-Positives", + "url": "https://github.com/joshuakt/Oxygen-False-Positives", + "rel": "/software/repository/github/joshuakt/Oxygen-False-Positives", + "avatar": "https://avatars.githubusercontent.com/u/37488322?v=4", + "description": "Python source code for planetary evolution model described in Krissansen-Totton et al. (2021; AGU Advances)", + "topics": [] }, { "uid": "github/gbouras13/plassembler", @@ -14073,1183 +13764,1062 @@ "topics": [] }, { - "uid": "github/SuperKogito/spafe", - "url": "https://github.com/SuperKogito/spafe", - "rel": "/software/repository/github/SuperKogito/spafe", - "avatar": "https://avatars.githubusercontent.com/u/15731839?v=4", - "description": ":sound: spafe: Simplified Python Audio Features Extraction", + "uid": "github/copasi/COPASI", + "url": "https://github.com/copasi/COPASI", + "rel": "/software/repository/github/copasi/COPASI", + "avatar": "https://avatars.githubusercontent.com/u/1854399?v=4", + "description": "COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.", + "topics": [ + "copasi", + "simulation", + "modeling", + "systems-biology", + "dynamics", + "chemistry", + "biochemistry", + "kinetics" + ] + }, + { + "uid": "github/copasi/basico", + "url": "https://github.com/copasi/basico", + "rel": "/software/repository/github/copasi/basico", + "avatar": "https://avatars.githubusercontent.com/u/1854399?v=4", + "description": "A simplified python interface to COPASI.", "topics": [ "python", - "dsp", - "audio", - "music", - "audio-analysis", - "music-information-retrieval", - "features-extraction", - "mfcc", - "filterbank", - "signal-processing", - "frequency", - "frequency-analysis", - "time-frequency-analysis", - "frequencies", - "voice", - "sound", - "beat", - "pitch", - "speech-processing", - "gammatone-filterbanks" + "copasi" ] }, { - "uid": "github/amkram/shusher", - "url": "https://github.com/amkram/shusher", - "rel": "/software/repository/github/amkram/shusher", - "avatar": "https://avatars.githubusercontent.com/u/6502785?v=4", - "description": "Private, browser-based placement of genome sequences on phylogenetic trees using UShER.", + "uid": "github/ABM4ALL/Melodie", + "url": "https://github.com/ABM4ALL/Melodie", + "rel": "/software/repository/github/ABM4ALL/Melodie", + "avatar": "https://avatars.githubusercontent.com/u/88455886?v=4", + "description": "A general framework for developing agent-based models in Python.", "topics": [] }, { - "uid": "github/gabo-di/AquaCrop.jl", - "url": "https://github.com/gabo-di/AquaCrop.jl", - "rel": "/software/repository/github/gabo-di/AquaCrop.jl", - "avatar": "https://avatars.githubusercontent.com/u/53311264?v=4", - "description": "FAO's Aqua Crop in Julia as part of Persefone.jl", + "uid": "github/qpv-research-group/solcore5", + "url": "https://github.com/qpv-research-group/solcore5", + "rel": "/software/repository/github/qpv-research-group/solcore5", + "avatar": "https://avatars0.githubusercontent.com/u/48552948?v=4", + "description": "A multi-scale, python-based library for the modelling of solar cells and semiconductor materials", + "topics": [ + "photovoltaic", + "semiconductor", + "solar-cells", + "python" + ] + }, + { + "uid": "github/bauer-alex/fuzzyclara", + "url": "https://github.com/bauer-alex/fuzzyclara", + "rel": "/software/repository/github/bauer-alex/fuzzyclara", + "avatar": "https://avatars.githubusercontent.com/u/20172676?v=4", + "description": "Efficient medoid-based clustering algorithms for large and fuzzy data", "topics": [] }, { - "uid": "github/winni2k/abeona", - "url": "https://github.com/winni2k/abeona", - "rel": "/software/repository/github/winni2k/abeona", - "avatar": "https://avatars.githubusercontent.com/u/304958?v=4", - "description": "abeona -- Abeona is the goddess of outward graph traversal", + "uid": "github/tikk3r/lofar-h5plot", + "url": "https://github.com/tikk3r/lofar-h5plot", + "rel": "/software/repository/github/tikk3r/lofar-h5plot", + "avatar": "https://avatars.githubusercontent.com/u/2464769?v=4", + "description": "A small GUI for plotting H5Parms produced during LOFAR calibration.", "topics": [] }, { - "uid": "github/alercebroker/ATAT", - "url": "https://github.com/alercebroker/ATAT", - "rel": "/software/repository/github/alercebroker/ATAT", - "avatar": "https://avatars.githubusercontent.com/u/46603914?v=4", - "description": "Astronomical Transformer for time series And Tabular data", + "uid": "github/tikk3r/legacystamps", + "url": "https://github.com/tikk3r/legacystamps", + "rel": "/software/repository/github/tikk3r/legacystamps", + "avatar": "https://avatars.githubusercontent.com/u/2464769?v=4", + "description": "A tiny Python module to allow easy retrieval of a cutout from the Legacy survey.", "topics": [] }, { - "uid": "github/pysersic/pysersic", - "url": "https://github.com/pysersic/pysersic", - "rel": "/software/repository/github/pysersic/pysersic", - "avatar": "https://avatars.githubusercontent.com/u/123014513?v=4", - "description": "Bayesian fitting of Sersic profiles to galaxy images accelerated with jax", + "uid": "github/ArneTillmann/AuDoLab", + "url": "https://github.com/ArneTillmann/AuDoLab", + "rel": "/software/repository/github/ArneTillmann/AuDoLab", + "avatar": "https://avatars.githubusercontent.com/u/36853006?v=4", + "description": null, "topics": [] }, { - "uid": "github/mpokorny/vysmaw", - "url": "https://github.com/mpokorny/vysmaw", - "rel": "/software/repository/github/mpokorny/vysmaw", - "avatar": "https://avatars.githubusercontent.com/u/794498?v=4", - "description": "Fast visibility stream muncher", + "uid": "github/jpmens/jo", + "url": "https://github.com/jpmens/jo", + "rel": "/software/repository/github/jpmens/jo", + "avatar": "https://avatars.githubusercontent.com/u/60706?v=4", + "description": "JSON output from a shell", + "topics": [] + }, + { + "uid": "github/OP2/PyOP2", + "url": "https://github.com/OP2/PyOP2", + "rel": "/software/repository/github/OP2/PyOP2", + "avatar": "https://avatars.githubusercontent.com/u/1544411?v=4", + "description": "Framework for performance-portable parallel computations on unstructured meshes", + "topics": [] + }, + { + "uid": "github/epruesse/SINA", + "url": "https://github.com/epruesse/SINA", + "rel": "/software/repository/github/epruesse/SINA", + "avatar": "https://avatars.githubusercontent.com/u/2774474?v=4", + "description": "SINA - Reference based multiple sequence alignment", "topics": [ - "cython", - "infiniband", - "data-stream", - "spectra", - "c", - "correlators" + "rrna", + "alignment", + "sequence", + "16s", + "silva", + "bioinformatics" ] }, { - "uid": "github/ctSkennerton/crass", - "url": "https://github.com/ctSkennerton/crass", - "rel": "/software/repository/github/ctSkennerton/crass", - "avatar": "https://avatars.githubusercontent.com/u/685235?v=4", - "description": "Crass is designed to identify and reconstruct CRISPR loci from raw metagenomic data without the need for assembly or prior knowledge of CRISPR in the data set.", + "uid": "github/pyccel/pyccel", + "url": "https://github.com/pyccel/pyccel", + "rel": "/software/repository/github/pyccel/pyccel", + "avatar": "https://avatars.githubusercontent.com/u/34218410?v=4", + "description": "Python extension language using accelerators", "topics": [ - "crispr", - "bioinformatics" + "hpc", + "mpi", + "openmp", + "fortran", + "dsl", + "sympy", + "openacc", + "python", + "python3", + "transpiler" ] }, { - "uid": "github/ctSkennerton/minced", - "url": "https://github.com/ctSkennerton/minced", - "rel": "/software/repository/github/ctSkennerton/minced", - "avatar": "https://avatars.githubusercontent.com/u/685235?v=4", - "description": "Mining CRISPRs in Environmental Datasets", + "uid": "github/linqs/psl", + "url": "https://github.com/linqs/psl", + "rel": "/software/repository/github/linqs/psl", + "avatar": "https://avatars1.githubusercontent.com/u/918327?v=4", + "description": "The PSL software from the University of Maryland and the University of California Santa Cruz", + "topics": [] + }, + { + "uid": "github/ebi-jdispatcher/taxonomy-resolver", + "url": "https://github.com/ebi-jdispatcher/taxonomy-resolver", + "rel": "/software/repository/github/ebi-jdispatcher/taxonomy-resolver", + "avatar": "https://avatars.githubusercontent.com/u/105044835?v=4", + "description": "Builds lists of Taxonomy Identifiers based on the NCBI Taxonomy Database", "topics": [ "bioinformatics", - "crispr" + "bioinformatics-tool", + "taxonomy" ] }, { - "uid": "github/marcocalza89/GrayHawk", - "url": "https://github.com/marcocalza89/GrayHawk", - "rel": "/software/repository/github/marcocalza89/GrayHawk", - "avatar": "https://avatars.githubusercontent.com/u/160862765?v=4", - "description": "Tools for computing GrayBody Factors of Spherically Symmetric BHs for different field spin", + "uid": "github/lbcb-sci/graphmap2", + "url": "https://github.com/lbcb-sci/graphmap2", + "rel": "/software/repository/github/lbcb-sci/graphmap2", + "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", + "description": "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html https://www.biorxiv.org/content/10.1101/720458v1", "topics": [] }, { - "uid": "github/jadexter/grtrans", - "url": "https://github.com/jadexter/grtrans", - "rel": "/software/repository/github/jadexter/grtrans", - "avatar": "https://avatars.githubusercontent.com/u/15629634?v=4", - "description": "Public Kerr metric polarized ray tracing radiative transfer code", + "uid": "github/lbcb-sci/racon", + "url": "https://github.com/lbcb-sci/racon", + "rel": "/software/repository/github/lbcb-sci/racon", + "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", + "description": "Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads", "topics": [] }, { - "uid": "github/chemfiles/chemfiles", - "url": "https://github.com/chemfiles/chemfiles", - "rel": "/software/repository/github/chemfiles/chemfiles", - "avatar": "https://avatars.githubusercontent.com/u/15002707?v=4", - "description": "Library for reading and writing chemistry files", + "uid": "github/lbcb-sci/raven", + "url": "https://github.com/lbcb-sci/raven", + "rel": "/software/repository/github/lbcb-sci/raven", + "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", + "description": "De novo genome assembler for long uncorrected reads", + "topics": [] + }, + { + "uid": "github/soerendip/ms-mint", + "url": "https://github.com/soerendip/ms-mint", + "rel": "/software/repository/github/soerendip/ms-mint", + "avatar": "https://avatars.githubusercontent.com/u/3391614?v=4", + "description": "Interactive application for large-scale metabolomics (MS1). ", "topics": [ - "computational-chemistry", - "library", - "files", - "compchem", - "cheminformatics", - "chemistry", - "hacktoberfest" + "mass-spectrometry", + "metabolomics", + "python", + "mint", + "extracts-data", + "visualization", + "interactive" ] }, { - "uid": "github/srigas/jaxkan", - "url": "https://github.com/srigas/jaxKAN", - "rel": "/software/repository/github/srigas/jaxkan", - "avatar": "https://avatars.githubusercontent.com/u/70939180?v=4", - "description": "Kolmogorov-Arnold Networks built on JAX", - "topics": [ - "flax", - "jax", - "kolmogorov-arnold-networks" - ] - }, - { - "uid": "github/spokenlanguage/platalea", - "url": "https://github.com/spokenlanguage/platalea", - "rel": "/software/repository/github/spokenlanguage/platalea", - "avatar": "https://avatars.githubusercontent.com/u/61155109?v=4", - "description": "Library for training visually-grounded models of spoken language understanding.", - "topics": [ - "visually-grounded-speech", - "multi-tasking", - "spoken-language-understanding", - "deep-neural-networks", - "speech-processing", - "weakly-supervised-learning", - "multimodal-learning", - "pytorch", - "flickr8k", - "spokencoco" - ] - }, - { - "uid": "github/hpdps-group/SolarZip", - "url": "https://github.com/hpdps-group/SolarZip", - "rel": "/software/repository/github/hpdps-group/SolarZip", - "avatar": "https://avatars.githubusercontent.com/u/64717357?v=4", - "description": "SolarZip\uff1aAn efficient and adaptive compression framework for Sloar EUV data", - "topics": [] - }, - { - "uid": "github/isce-framework/dolphin", - "url": "https://github.com/isce-framework/dolphin", - "rel": "/software/repository/github/isce-framework/dolphin", - "avatar": "https://avatars.githubusercontent.com/u/46032197?v=4", - "description": "InSAR phase linking library for PS/DS processing", + "uid": "github/scikit-hep/vector", + "url": "https://github.com/scikit-hep/vector", + "rel": "/software/repository/github/scikit-hep/vector", + "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", + "description": "Vector classes and utilities", "topics": [ - "insar", - "time-series", - "deformation", - "squeesar", - "phase-linking", - "geoscience", - "geospatial-processing", - "remote-sensing" + "scikit-hep", + "vector" ] }, { - "uid": "github/pysat/pysat", - "url": "https://github.com/pysat/pysat", - "rel": "/software/repository/github/pysat/pysat", - "avatar": "https://avatars.githubusercontent.com/u/54805292?v=4", - "description": "Generalized satellite and space science data processing and file management. ", + "uid": "github/scikit-hep/pyhf", + "url": "https://github.com/scikit-hep/pyhf", + "rel": "/software/repository/github/scikit-hep/pyhf", + "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", + "description": "pure-Python HistFactory implementation with tensors and autodiff", "topics": [ - "space", - "satellite-data", - "space-science", - "measurements", + "high-energy-physics", + "statistical-inference", + "scientific-computations", + "numpy", + "scipy", + "tensorflow", + "pytorch", + "asymptotic-formulas", + "statistics", + "frequentist-statistics", + "cls", + "histfactory", "python", - "netcdf", - "nasa-data", - "science-research", - "ionosphere", - "magnetosphere", - "thermosphere", - "radar-measurements", - "nasa", - "cubesat", - "plasma", - "electric-fields" - ] - }, - { - "uid": "github/JuliaAI/Imbalance.jl", - "url": "https://github.com/JuliaAI/Imbalance.jl", - "rel": "/software/repository/github/JuliaAI/Imbalance.jl", - "avatar": "https://avatars.githubusercontent.com/u/80715868?v=4", - "description": "A Julia toolbox with resampling methods to correct for class imbalance.", - "topics": [ - "class-imbalance", - "classification", - "machine-learning" + "hep", + "hep-ex", + "scikit-hep", + "jax" ] }, { - "uid": "github/9505-PNNL/wmpy_power", - "url": "https://github.com/9505-PNNL/wmpy_power", - "rel": "/software/repository/github/9505-PNNL/wmpy_power", - "avatar": "https://avatars.githubusercontent.com/u/156456652?v=4", - "description": " A hydropower simulation model", - "topics": [] - }, - { - "uid": "github/BiaPyX/BiaPy", - "url": "https://github.com/BiaPyX/BiaPy", - "rel": "/software/repository/github/BiaPyX/BiaPy", - "avatar": "https://avatars.githubusercontent.com/u/156199480?v=4", - "description": "Open source Python library for building bioimage analysis pipelines", + "uid": "github/scikit-hep/iminuit", + "url": "https://github.com/scikit-hep/iminuit", + "rel": "/software/repository/github/scikit-hep/iminuit", + "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", + "description": "Jupyter-friendly Python interface for C++ MINUIT2", "topics": [ - "computer-vision", - "deep-learning", - "biomedical-image-processing", - "segmentation", - "convolutional-neural-networks", - "image-segmentation", - "medical-imaging", - "semantic-segmentation", - "classification", - "instance-segmentation", - "object-detection", - "image-processing", - "machine-learning", - "denoising", - "self-supervised-learning", - "super-resolution", "python", - "pytorch" + "fitting", + "optimization", + "c-plus-plus", + "scikit-hep" ] }, { - "uid": "github/DiseaseTranscriptomicsLab/scStudio", - "url": "https://github.com/DiseaseTranscriptomicsLab/scStudio", - "rel": "/software/repository/github/DiseaseTranscriptomicsLab/scStudio", - "avatar": "https://avatars.githubusercontent.com/u/125599003?v=4", - "description": "A User-Friendly Web Application for Intuitive and Comprehensive scRNA-seq Data Analysis ", + "uid": "github/AlexandrosAntoniadis/ODUSSEAS", + "url": "https://github.com/AlexandrosAntoniadis/ODUSSEAS", + "rel": "/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", + "avatar": "https://avatars.githubusercontent.com/u/32932882?v=4", + "description": null, "topics": [] }, { - "uid": "github/i-VRESSE/workflow-builder", - "url": "https://github.com/i-VRESSE/workflow-builder", - "rel": "/software/repository/github/i-VRESSE/workflow-builder", - "avatar": "https://avatars.githubusercontent.com/u/93722891?v=4", - "description": "Graphical interface to build a workflow file", + "uid": "github/SDXorg/pysd", + "url": "https://github.com/SDXorg/pysd", + "rel": "/software/repository/github/SDXorg/pysd", + "avatar": "https://avatars.githubusercontent.com/u/11491926?v=4", + "description": "System Dynamics Modeling in Python", "topics": [] }, { - "uid": "github/i-VRESSE/pdbtbx-ts", - "url": "https://github.com/i-VRESSE/pdbtbx-ts", - "rel": "/software/repository/github/i-VRESSE/pdbtbx-ts", - "avatar": "https://avatars.githubusercontent.com/u/93722891?v=4", - "description": "JS wrapper around pdbtbx rust crate", + "uid": "github/whybsml/whybsml", + "url": "https://github.com/whybsml/whybsml", + "rel": "/software/repository/github/whybsml/whybsml", + "avatar": "https://avatars.githubusercontent.com/u/138935718?v=4", + "description": null, "topics": [] }, { - "uid": "github/ihmwg/python-modelcif", - "url": "https://github.com/ihmwg/python-modelcif", - "rel": "/software/repository/github/ihmwg/python-modelcif", - "avatar": "https://avatars.githubusercontent.com/u/19265055?v=4", - "description": " Python package for handling ModelCIF mmCIF and BinaryCIF files ", + "uid": "github/Dailer/RCausticMass", + "url": "https://github.com/Dailer/RCausticMass", + "rel": "/software/repository/github/Dailer/RCausticMass", + "avatar": "https://avatars.githubusercontent.com/u/33109275?v=4", + "description": "Caustic Mass Estimator for Galaxy Clusters", "topics": [] }, { - "uid": "github/dfujim/bfit", - "url": "https://github.com/dfujim/bfit", - "rel": "/software/repository/github/dfujim/bfit", - "avatar": "https://avatars.githubusercontent.com/u/7872559?v=4", - "description": "A Python application for the analysis of \u03b2-NMR and \u03b2-NQR data taken at TRIUMF.", + "uid": "github/nickhand/pyRSD", + "url": "https://github.com/nickhand/pyRSD", + "rel": "/software/repository/github/nickhand/pyRSD", + "avatar": "https://avatars.githubusercontent.com/u/2262496?v=4", + "description": "Accurate predictions for the clustering of galaxies in redshift-space in Python", "topics": [ - "b-nmr", - "b-nqr", - "triumf" + "astrophysics", + "galaxies", + "cosmology", + "large-scale-structure", + "python", + "c-plus-plus", + "power-spectrum" ] }, { - "uid": "github/areenberg/MDPSolver", - "url": "https://github.com/areenberg/MDPSolver", - "rel": "/software/repository/github/areenberg/MDPSolver", - "avatar": "https://avatars.githubusercontent.com/u/48519503?v=4", - "description": "A fast solver for Markov Decision Processes", + "uid": "github/luntergroup/octopus", + "url": "https://github.com/luntergroup/octopus", + "rel": "/software/repository/github/luntergroup/octopus", + "avatar": "https://avatars.githubusercontent.com/u/12530086?v=4", + "description": "Bayesian haplotype-based mutation calling", "topics": [ - "decision-process", - "markov-decision-process", - "optimization", - "predictive-maintenance", - "reinforcement-learning", - "solver" + "genomics", + "variant-calling", + "bioinformatics", + "variants", + "haplotypes", + "somatic-variants", + "de-novo-mutation", + "phasing", + "single-cell" ] }, { - "uid": "github/griffithlab/regtools", - "url": "https://github.com/griffithlab/regtools", - "rel": "/software/repository/github/griffithlab/regtools", - "avatar": "https://avatars.githubusercontent.com/u/8323084?v=4", - "description": "Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.", - "topics": [] - }, - { - "uid": "github/Robaina/Pynteny", - "url": "https://github.com/Robaina/Pynteny", - "rel": "/software/repository/github/Robaina/Pynteny", - "avatar": "https://avatars.githubusercontent.com/u/21340147?v=4", - "description": "Query sequence database by HMMs arranged in predefined synteny structure", + "uid": "github/SandoghdarLab/PiSCAT", + "url": "https://github.com/SandoghdarLab/PiSCAT", + "rel": "/software/repository/github/SandoghdarLab/PiSCAT", + "avatar": "https://avatars.githubusercontent.com/u/77978055?v=4", + "description": "PiSCAT is a python-based package with a graphical user interface for performing high-performance analysis on a variety of iSCAT measurements.", "topics": [ - "bioinformatics", - "genomics", - "hmmer", - "metagenomics", - "prokaryotic-genomes", - "synteny", - "hmm", "python", - "synteny-block", - "computational-biology" + "data-analysis", + "microscopy-images", + "nano-particles" ] }, { - "uid": "github/easybuilders/easybuild", - "url": "https://github.com/easybuilders/easybuild", - "rel": "/software/repository/github/easybuilders/easybuild", - "avatar": "https://avatars1.githubusercontent.com/u/29568382?v=4", - "description": "EasyBuild - building software with ease", + "uid": "github/Cadaei-Yuvxvs/OSHy-X", + "url": "https://github.com/Cadaei-Yuvxvs/OSHy-X", + "rel": "/software/repository/github/Cadaei-Yuvxvs/OSHy-X", + "avatar": "https://avatars.githubusercontent.com/u/56923643?v=4", + "description": "Open Source Hypothalamic Atlas and Segmentation for 3T and 7T", "topics": [] }, { - "uid": "github/DynaSlum/satsense", - "url": "https://github.com/DynaSlum/satsense", - "rel": "/software/repository/github/DynaSlum/satsense", - "avatar": "https://avatars1.githubusercontent.com/u/23557167?v=4", - "description": "Satsense is a Python library for land use/cover classification using satellite imagery", - "topics": [ - "satellite-images", - "classification", - "machine-learning", - "machine-learning-algorithms", - "land-use", - "land-cover", - "earth-observation" - ] - }, - { - "uid": "github/valentingar/confluxpro", - "url": "https://github.com/valentingar/ConFluxPro", - "rel": "/software/repository/github/valentingar/confluxpro", - "avatar": "https://avatars.githubusercontent.com/u/74970146?v=4", - "description": "A toolkit for soil gas analysis", + "uid": "github/veragluscevic/dmdd", + "url": "https://github.com/veragluscevic/dmdd", + "rel": "/software/repository/github/veragluscevic/dmdd", + "avatar": "https://avatars.githubusercontent.com/u/9042052?v=4", + "description": "A python package that enables simple simulation and Bayesian posterior analysis of nuclear-recoil data from dark matter direct detection experiments for a wide variety of theories of dark matter-nucleon interactions.", "topics": [] }, { - "uid": "github/damienmarsic/Parent-map", - "url": "https://github.com/damienmarsic/Parent-map", - "rel": "/software/repository/github/damienmarsic/Parent-map", - "avatar": "https://avatars.githubusercontent.com/u/11306128?v=4", - "description": "Analyze parental contributions to evolved or engineered protein or DNA sequences", + "uid": "github/chakrah/sage", + "url": "https://github.com/chakrah/sage", + "rel": "/software/repository/github/chakrah/sage", + "avatar": "https://avatars.githubusercontent.com/u/100677905?v=4", + "description": "This code creates the stellar activity grid for exoplanets", "topics": [] }, { - "uid": "github/sinanozaydin/pide", - "url": "https://github.com/sinanozaydin/pide", - "rel": "/software/repository/github/sinanozaydin/pide", - "avatar": "https://avatars.githubusercontent.com/u/63723568?v=4", - "description": "A python library for petrophysical calculations.", - "topics": [] + "uid": "github/dfki-ric/movement_primitives", + "url": "https://github.com/dfki-ric/movement_primitives", + "rel": "/software/repository/github/dfki-ric/movement_primitives", + "avatar": "https://avatars.githubusercontent.com/u/37366708?v=4", + "description": "Dynamical movement primitives (DMPs), probabilistic movement primitives (ProMPs), and spatially coupled bimanual DMPs for imitation learning.", + "topics": [ + "python", + "robotics" + ] }, { - "uid": "github/citiususc/BigSeqKit", - "url": "https://github.com/citiususc/BigSeqKit", - "rel": "/software/repository/github/citiususc/BigSeqKit", - "avatar": "https://avatars.githubusercontent.com/u/5822373?v=4", - "description": "BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale", + "uid": "github/LTeinturier/Cloud-Killer-", + "url": "https://github.com/LTeinturier/Cloud-Killer-", + "rel": "/software/repository/github/LTeinturier/Cloud-Killer-", + "avatar": "https://avatars.githubusercontent.com/u/91485873?v=4", + "description": "Project cloud killer ", "topics": [] }, { - "uid": "github/citiususc/veryfasttree", - "url": "https://github.com/citiususc/veryfasttree", - "rel": "/software/repository/github/citiususc/veryfasttree", - "avatar": "https://avatars.githubusercontent.com/u/5822373?v=4", - "description": "Speeding up the estimation of phylogenetic trees for large alignments through parallelization and vectorization strategies", + "uid": "github/DedalusProject/eigentools", + "url": "https://github.com/DedalusProject/eigentools", + "rel": "/software/repository/github/DedalusProject/eigentools", + "avatar": "https://avatars.githubusercontent.com/u/25985571?v=4", + "description": "The Eigentools package for Dedalus", "topics": [] }, { - "uid": "github/gagneurlab/drop", - "url": "https://github.com/gagneurlab/drop", - "rel": "/software/repository/github/gagneurlab/drop", - "avatar": "https://avatars.githubusercontent.com/u/29893284?v=4", - "description": "(Detection of RNA Outlier Pipeline) pipeline to find aberrant gene expression events in RNA sequencing data.", - "topics": [ - "pipeline", - "rna-seq", - "genetic-diagnosis" - ] - }, - { - "uid": "github/sbebo/joypy", - "url": "https://github.com/leotac/joypy", - "rel": "/software/repository/github/sbebo/joypy", - "avatar": "https://avatars.githubusercontent.com/u/1311290?v=4", - "description": "Joyplots in Python with matplotlib & pandas :chart_with_upwards_trend:", + "uid": "github/JieZheng-ShanghaiTech/PiLSL", + "url": "https://github.com/JieZheng-ShanghaiTech/PiLSL", + "rel": "/software/repository/github/JieZheng-ShanghaiTech/PiLSL", + "avatar": "https://avatars.githubusercontent.com/u/47076474?v=4", + "description": "PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer drug targets. It learns the representation of pairwise interaction between two genes from a knowledge graph (KG).", "topics": [ - "data-visualization", - "python", - "matplotlib", - "plotting" + "bioinformatics", + "data-science", + "drug-discovery", + "machine-learning" ] }, { - "uid": "github/slacgismo/solar-data-tools", - "url": "https://github.com/slacgismo/solar-data-tools", - "rel": "/software/repository/github/slacgismo/solar-data-tools", - "avatar": "https://avatars.githubusercontent.com/u/19895500?v=4", - "description": "Some data analysis tools for working with historical PV solar time-series data sets. ", + "uid": "github/etempel/Bisous", + "url": "https://github.com/etempel/Bisous", + "rel": "/software/repository/github/etempel/Bisous", + "avatar": "https://avatars.githubusercontent.com/u/10911479?v=4", + "description": null, "topics": [] }, { - "uid": "github/gxiaolab/scAllele", - "url": "https://github.com/gxiaolab/scAllele", - "rel": "/software/repository/github/gxiaolab/scAllele", - "avatar": "https://avatars.githubusercontent.com/u/43121068?v=4", - "description": "scAllele is a versatile tool to detect and analyze nucleotide variants in scRNA-seq.", + "uid": "github/jfarek/xatlas", + "url": "https://github.com/jfarek/xatlas", + "rel": "/software/repository/github/jfarek/xatlas", + "avatar": "https://avatars.githubusercontent.com/u/20506792?v=4", + "description": "xAtlas is a fast and retrainable small variant caller that has been developed at the Baylor College of Medicine Human Genome Sequencing Center.", "topics": [] }, { - "uid": "github/ilikecubesnstuff/commensurability", - "url": "https://github.com/ilikecubesnstuff/commensurability", - "rel": "/software/repository/github/ilikecubesnstuff/commensurability", - "avatar": "https://avatars.githubusercontent.com/u/25328250?v=4", - "description": "Packages for calculating orbit commensurabilities.", + "uid": "github/jfarek/alignstats", + "url": "https://github.com/jfarek/alignstats", + "rel": "/software/repository/github/jfarek/alignstats", + "avatar": "https://avatars.githubusercontent.com/u/20506792?v=4", + "description": "Comprehensive alignment, whole-genome coverage, and capture coverage statistics.", "topics": [] }, { - "uid": "github/AndrewGibbs/PathFinder", - "url": "https://github.com/AndrewGibbs/PathFinder", - "rel": "/software/repository/github/AndrewGibbs/PathFinder", - "avatar": "https://avatars.githubusercontent.com/u/32740541?v=4", - "description": "A Matlab/Octave package for oscillatory integration", + "uid": "github/Nico-Curti/rFBP", + "url": "https://github.com/Nico-Curti/rFBP", + "rel": "/software/repository/github/Nico-Curti/rFBP", + "avatar": "https://avatars2.githubusercontent.com/u/24650975?v=4", + "description": "Replicated Focusing Belief Propagation algorithm", "topics": [ - "oscillatory-integrals", - "steepest-descent", - "saddle-point" + "belief-propagation", + "deep-neural-networks", + "spin-glass", + "statistical-mechanics", + "learning-algorithm", + "machine-learning-algorithms", + "python3", + "cpp17" ] }, { - "uid": "github/james-trayford/strauss", - "url": "https://github.com/james-trayford/strauss", - "rel": "/software/repository/github/james-trayford/strauss", - "avatar": "https://avatars.githubusercontent.com/u/25175083?v=4", - "description": "Sonification Tools and Resources for Analysis Using Sound Synthesis", + "uid": "github/fastpm/fastpm", + "url": "https://github.com/fastpm/fastpm", + "rel": "/software/repository/github/fastpm/fastpm", + "avatar": "https://avatars.githubusercontent.com/u/69364119?v=4", + "description": "fastPM - A N-body Particle Mesh solver that scales", "topics": [] }, { - "uid": "github/asntech/intervene", - "url": "https://github.com/asntech/intervene", - "rel": "/software/repository/github/asntech/intervene", - "avatar": "https://avatars.githubusercontent.com/u/3965104?v=4", - "description": "Intervene: a tool for intersection and visualization of multiple genomic region and gene sets", + "uid": "github/ericfell/rfbzero", + "url": "https://github.com/ericfell/rfbzero", + "rel": "/software/repository/github/ericfell/rfbzero", + "avatar": "https://avatars.githubusercontent.com/u/39314565?v=4", + "description": "Redox flow battery electrochemical cycling models in Python", "topics": [ - "visualization", - "genome-analysis", - "dna-sequences", - "bedtools", - "pyton", - "venn-diagram", - "heatmaps", - "intersection" + "batteries", + "battery-models", + "microkinetics", + "python", + "simulation", + "rfbzero" ] }, { - "uid": "github/JosephIsaacTurner/pypaperretriever", - "url": "https://github.com/JosephIsaacTurner/pypaperretriever", - "rel": "/software/repository/github/JosephIsaacTurner/pypaperretriever", - "avatar": "https://avatars.githubusercontent.com/u/124412177?v=4", - "description": null, + "uid": "github/klebgenomics/Kleborate", + "url": "https://github.com/klebgenomics/Kleborate", + "rel": "/software/repository/github/klebgenomics/Kleborate", + "avatar": "https://avatars.githubusercontent.com/u/129378057?v=4", + "description": "Kleborate: a tool for typing and screening pathogen genome assemblies", "topics": [] }, { - "uid": "github/idefix-code/idefix", - "url": "https://github.com/idefix-code/idefix", - "rel": "/software/repository/github/idefix-code/idefix", - "avatar": "https://avatars.githubusercontent.com/u/123293720?v=4", - "description": "Idefix source code for astrophysical fluid dynamics", + "uid": "github/codidact/qpixel", + "url": "https://github.com/codidact/qpixel", + "rel": "/software/repository/github/codidact/qpixel", + "avatar": "https://avatars2.githubusercontent.com/u/57011216?v=4", + "description": "Q&A-based community knowledge-sharing software", "topics": [] }, { - "uid": "github/WentaoZhan1998/geospaNN", - "url": "https://github.com/WentaoZhan1998/geospaNN", - "rel": "/software/repository/github/WentaoZhan1998/geospaNN", - "avatar": "https://avatars.githubusercontent.com/u/81460653?v=4", - "description": null, + "uid": "github/andreaminio/haplosync", + "url": "https://github.com/andreaminio/HaploSync", + "rel": "/software/repository/github/andreaminio/haplosync", + "avatar": "https://avatars.githubusercontent.com/u/33559900?v=4", + "description": "Tools for haplotype-wise reconstruction of pseudomolecules", "topics": [] }, { - "uid": "github/kircherlab/ReMM", - "url": "https://github.com/kircherlab/ReMM", - "rel": "/software/repository/github/kircherlab/ReMM", - "avatar": "https://avatars.githubusercontent.com/u/26594270?v=4", - "description": "ReMM score snakemake workflow ", + "uid": "github/ihrke/pypillometry", + "url": "https://github.com/ihrke/pypillometry", + "rel": "/software/repository/github/ihrke/pypillometry", + "avatar": "https://avatars2.githubusercontent.com/u/1140241?v=4", + "description": "pupillometry with python", "topics": [] }, { - "uid": "github/kircherlab/cfDNA-UniFlow", - "url": "https://github.com/kircherlab/cfDNA-UniFlow", - "rel": "/software/repository/github/kircherlab/cfDNA-UniFlow", - "avatar": "https://avatars.githubusercontent.com/u/26594270?v=4", - "description": "Workflow for preprocessing cfDNA samples.", + "uid": "github/valeriabonapersona/repair", + "url": "https://github.com/valeriabonapersona/RePAIR", + "rel": "/software/repository/github/valeriabonapersona/repair", + "avatar": "https://avatars.githubusercontent.com/u/46342235?v=4", + "description": "Reduction from Prior Animal Informed Research", "topics": [] }, { - "uid": "github/alexander-mead/HMcode", - "url": "https://github.com/alexander-mead/HMcode", - "rel": "/software/repository/github/alexander-mead/HMcode", - "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", - "description": "Augmented halo model for accurate non-linear matter power spectrum calculations", - "topics": [ - "astrophysics", - "cosmology", - "astronomy" + "uid": "github/rgerum/pylustrator", + "url": "https://github.com/rgerum/pylustrator", + "rel": "/software/repository/github/rgerum/pylustrator", + "avatar": "https://avatars0.githubusercontent.com/u/14153051?v=4", + "description": "Visualisations of data are at the core of every publication of scientific research results. They have to be as clear as possible to facilitate the communication of research. As data can have different formats and shapes, the visualisations often have to be adapted to reflect the data as well as possible. We developed Pylustrator, an interface to directly edit python generated matplotlib graphs to finalize them for publication. Therefore, subplots can be resized and dragged around by the mouse, text and annotations can be added. The changes can be saved to the initial plot file as python code.", + "topics": [ + "matplotlib", + "gui", + "code-generation", + "interactive", + "visualisation" ] }, { - "uid": "github/alexander-mead/collapse", - "url": "https://github.com/alexander-mead/collapse", - "rel": "/software/repository/github/alexander-mead/collapse", - "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", - "description": "Spherical-collapse model code", + "uid": "github/benmkent/SparseGridsKit.jl", + "url": "https://github.com/benmkent/SparseGridsKit.jl", + "rel": "/software/repository/github/benmkent/SparseGridsKit.jl", + "avatar": "https://avatars.githubusercontent.com/u/52756911?v=4", + "description": "Simple sparse grid interpolation Julia implementation", "topics": [] }, { - "uid": "github/alexander-mead/pyhalomodel", - "url": "https://github.com/alexander-mead/pyhalomodel", - "rel": "/software/repository/github/alexander-mead/pyhalomodel", - "avatar": "https://avatars.githubusercontent.com/u/9140961?v=4", - "description": "A pure Python halo-model implementation for power spectra of any large-scale structure tracer combination.", - "topics": [ - "astrophysics", - "cosmology", - "large-scale-structure" - ] + "uid": "github/dingyaozhang/Evitar", + "url": "https://github.com/dingyaozhang/Evitar", + "rel": "/software/repository/github/dingyaozhang/Evitar", + "avatar": "https://avatars.githubusercontent.com/u/59897897?v=4", + "description": null, + "topics": [] }, { - "uid": "github/wvanzeist/riroriro", - "url": "https://github.com/wvanzeist/riroriro", - "rel": "/software/repository/github/wvanzeist/riroriro", - "avatar": "https://avatars.githubusercontent.com/u/65263211?v=4", - "description": "A code for simulating gravitational waves and evaluating their detectability.", - "topics": [ - "gravitational-waves", - "bpass" - ] + "uid": "github/ryneches/SuchTree", + "url": "https://github.com/ryneches/SuchTree", + "rel": "/software/repository/github/ryneches/SuchTree", + "avatar": "https://avatars.githubusercontent.com/u/440383?v=4", + "description": "A Python library for fast, thread-safe computations on phylogenetic trees", + "topics": [] }, { - "uid": "github/CRPropa/CRPropa2", - "url": "https://github.com/CRPropa/CRPropa2", - "rel": "/software/repository/github/CRPropa/CRPropa2", - "avatar": "https://avatars.githubusercontent.com/u/2363457?v=4", - "description": "Previous version of CRPropa", + "uid": "github/ekerrison/RadioSED", + "url": "https://github.com/ekerrison/RadioSED", + "rel": "/software/repository/github/ekerrison/RadioSED", + "avatar": "https://avatars.githubusercontent.com/u/58801416?v=4", + "description": "Radio SED fitting for AGN", "topics": [] }, { - "uid": "github/CRPropa/CRPropa3", - "url": "https://github.com/CRPropa/CRPropa3", - "rel": "/software/repository/github/CRPropa/CRPropa3", - "avatar": "https://avatars.githubusercontent.com/u/2363457?v=4", - "description": " CRPropa is a public astrophysical simulation framework for propagating extraterrestrial ultra-high energy particles. https://crpropa.github.io/CRPropa3/", + "uid": "github/prashjet/popkinmocks", + "url": "https://github.com/prashjet/popkinmocks", + "rel": "/software/repository/github/prashjet/popkinmocks", + "avatar": "https://avatars.githubusercontent.com/u/34376548?v=4", + "description": "Create mock IFU datacubes for stellar population and kinematic modelling.", "topics": [ - "cosmic-rays", - "propagation", - "monte-carlo-simulation", - "astroparticle-physics" + "astronomy", + "astrophysics", + "datacube", + "galaxy", + "python", + "spectroscopy", + "stellar-kinematics", + "stellar-populations" ] }, { - "uid": "github/mwoodbri/MRIdb", - "url": "https://github.com/mwoodbri/MRIdb", - "rel": "/software/repository/github/mwoodbri/MRIdb", - "avatar": "https://avatars.githubusercontent.com/u/1724545?v=4", - "description": "An end-to-end data management system for MRI", + "uid": "github/NVlabs/scene_synthesizer", + "url": "https://github.com/NVlabs/scene_synthesizer", + "rel": "/software/repository/github/NVlabs/scene_synthesizer", + "avatar": "https://avatars.githubusercontent.com/u/2695301?v=4", + "description": "Python package to create manipulation scenes.", "topics": [] }, { - "uid": "github/FePhyFoFum/phyx", - "url": "https://github.com/FePhyFoFum/phyx", - "rel": "/software/repository/github/FePhyFoFum/phyx", - "avatar": "https://avatars.githubusercontent.com/u/3589956?v=4", - "description": "phylogenetics tools for linux (and other mostly posix compliant) computers", + "uid": "github/geza-kovacs/tran_k2", + "url": "https://github.com/geza-kovacs/tran_k2", + "rel": "/software/repository/github/geza-kovacs/tran_k2", + "avatar": "https://avatars.githubusercontent.com/u/72140288?v=4", + "description": "Planetary transit search in the presence of stellar variability and instrumental systematics", + "topics": [] + }, + { + "uid": "github/mikecokina/elisa", + "url": "https://github.com/mikecokina/elisa", + "rel": "/software/repository/github/mikecokina/elisa", + "avatar": "https://avatars.githubusercontent.com/u/23422027?v=4", + "description": null, "topics": [ - "phylogenetics", - "molecular-evolution", - "simulation" + "eclipsing-binaries", + "astronomy", + "analysis", + "modeling", + "physic" ] }, { - "uid": "github/mraveri/tensiometer", - "url": "https://github.com/mraveri/tensiometer", - "rel": "/software/repository/github/mraveri/tensiometer", - "avatar": "https://avatars.githubusercontent.com/u/8779332?v=4", - "description": null, + "uid": "github/3D-e-Chem/knime-molviewer", + "url": "https://github.com/3D-e-Chem/knime-molviewer", + "rel": "/software/repository/github/3D-e-Chem/knime-molviewer", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "KNIME node which launches a web browser with moleculer viewer powered by webgl", "topics": [] }, { - "uid": "github/jonzink/EDI_Vetter_unplugged", - "url": "https://github.com/jonzink/EDI_Vetter_unplugged", - "rel": "/software/repository/github/jonzink/EDI_Vetter_unplugged", - "avatar": "https://avatars.githubusercontent.com/u/44911960?v=4", - "description": "A compact version of EDI-Vetter, which uses the TLS output to quickly vet transit signals. All your favorite hits in a simplified format.", - "topics": [ - "vetting-metrics", - "python", - "tls", - "telescope", - "edi-vetter-unplugged", - "exoplanets", - "transit-data" - ] + "uid": "github/3D-e-Chem/knime-klifs", + "url": "https://github.com/3D-e-Chem/knime-klifs", + "rel": "/software/repository/github/3D-e-Chem/knime-klifs", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Knime nodes to interact with KLIFS", + "topics": [] }, { - "uid": "github/jonzink/EDI-Vetter", - "url": "https://github.com/jonzink/EDI-Vetter", - "rel": "/software/repository/github/jonzink/EDI-Vetter", - "avatar": "https://avatars.githubusercontent.com/u/44911960?v=4", - "description": "The (Exoplanet Detection Identifier) EDI-Vetter is the rock'n roll love child of Terra and RoboVetter, optimized to vet K2 transit signals.", - "topics": [ - "exoplanets", - "transits", - "k2-data-science", - "python" - ] + "uid": "github/3D-e-Chem/knime-silicos-it", + "url": "https://github.com/3D-e-Chem/knime-silicos-it", + "rel": "/software/repository/github/3D-e-Chem/knime-silicos-it", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "KNIME nodes and example workflows for software made by Silicos-it, ie. align-it, shape-it", + "topics": [] }, { - "uid": "github/jvc2688/K2-CPM", - "url": "https://github.com/jvc2688/K2-CPM", - "rel": "/software/repository/github/jvc2688/K2-CPM", - "avatar": "https://avatars.githubusercontent.com/u/4012293?v=4", - "description": null, + "uid": "github/3D-e-Chem/kripodb", + "url": "https://github.com/3D-e-Chem/kripodb", + "rel": "/software/repository/github/3D-e-Chem/kripodb", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Library to interact with Kripo fragment, fingerprint and similarity data files.", "topics": [] }, { - "uid": "github/tdrobinson/coronagraph_noise", - "url": "https://github.com/tdrobinson/coronagraph_noise", - "rel": "/software/repository/github/tdrobinson/coronagraph_noise", - "avatar": "https://avatars.githubusercontent.com/u/17238828?v=4", - "description": "Coronagraph noise modeling routines", + "uid": "github/3D-e-Chem/knime-sstea", + "url": "https://github.com/3D-e-Chem/knime-sstea", + "rel": "/software/repository/github/3D-e-Chem/knime-sstea", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Knime node to calculate ss-TEA score of sequence alignment and subfamily members.", "topics": [] }, { - "uid": "github/ywx649999311/EzTao", - "url": "https://github.com/ywx649999311/EzTao", - "rel": "/software/repository/github/ywx649999311/EzTao", - "avatar": "https://avatars.githubusercontent.com/u/11515291?v=4", - "description": "A Python Toolkit for AGN Time Series Analysis using CARMA models", - "topics": [ - "carma", - "drw", - "agn", - "astronomy", - "time-series", - "gaussian-processes" - ] + "uid": "github/3D-e-Chem/knime-pharmacophore", + "url": "https://github.com/3D-e-Chem/knime-pharmacophore", + "rel": "/software/repository/github/3D-e-Chem/knime-pharmacophore", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "KNIME nodes to read/write pharmacophore files", + "topics": [] }, { - "uid": "github/ywx649999311/vizic", - "url": "https://github.com/ywx649999311/vizic", - "rel": "/software/repository/github/ywx649999311/vizic", - "avatar": "https://avatars.githubusercontent.com/u/11515291?v=4", - "description": "A Jupyter-based Interactive Visualization Tool for Astronomical Catalogs", - "topics": [ - "jupyter-notebook", - "astronomical-catalogs" - ] + "uid": "github/3D-e-Chem/3D-e-Chem-VM", + "url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", + "rel": "/software/repository/github/3D-e-Chem/3D-e-Chem-VM", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows", + "topics": [] }, { - "uid": "github/jeremiah-corrado/fem_2d", - "url": "https://github.com/jeremiah-corrado/fem_2d", - "rel": "/software/repository/github/jeremiah-corrado/fem_2d", - "avatar": "https://avatars.githubusercontent.com/u/62707311?v=4", - "description": "A rust library for 2D Finite Element Method computations", + "uid": "github/3D-e-Chem/sygma", + "url": "https://github.com/3D-e-Chem/sygma", + "rel": "/software/repository/github/3D-e-Chem/sygma", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "A python library for prediction of drug metabolites", "topics": [] }, { - "uid": "github/Open-ET/flux-data-qaqc", - "url": "https://github.com/Open-ET/flux-data-qaqc", - "rel": "/software/repository/github/Open-ET/flux-data-qaqc", - "avatar": "https://avatars.githubusercontent.com/u/18035656?v=4", - "description": "Energy Balance Closure Analysis and Eddy Flux Data Post-Processing", + "uid": "github/3D-e-Chem/knime-gpcrdb", + "url": "https://github.com/3D-e-Chem/knime-gpcrdb", + "rel": "/software/repository/github/3D-e-Chem/knime-gpcrdb", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "GPCRDB nodes for Knime", "topics": [] }, { - "uid": "github/weiliu123/PCLassoReg", - "url": "https://github.com/weiliu123/PCLassoReg", - "rel": "/software/repository/github/weiliu123/PCLassoReg", - "avatar": "https://avatars.githubusercontent.com/u/20275072?v=4", - "description": null, + "uid": "github/3D-e-Chem/knime-sygma", + "url": "https://github.com/3D-e-Chem/knime-sygma", + "rel": "/software/repository/github/3D-e-Chem/knime-sygma", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "KNIME nodes for Sygma", "topics": [] }, { - "uid": "github/remingtonsexton/BADASS3", - "url": "https://github.com/remingtonsexton/BADASS3", - "rel": "/software/repository/github/remingtonsexton/BADASS3", - "avatar": "https://avatars.githubusercontent.com/u/25069504?v=4", - "description": "Bayesian AGN Decomposition Analysis for SDSS Spectra", + "uid": "github/3D-e-Chem/knime-kripodb", + "url": "https://github.com/3D-e-Chem/knime-kripodb", + "rel": "/software/repository/github/3D-e-Chem/knime-kripodb", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Knime node for KripoDB package", "topics": [] }, { - "uid": "github/ProjectPyRhO/PyRhO", - "url": "https://github.com/ProjectPyRhO/PyRhO", - "rel": "/software/repository/github/ProjectPyRhO/PyRhO", - "avatar": "https://avatars.githubusercontent.com/u/16543743?v=4", - "description": "A virtual optogenetics laboratory", - "topics": [ - "python", - "optogenetics", - "opsin", - "jupyter-widget", - "computational-neuroscience", - "neuron", - "brian2", - "neuroscience", - "brain", - "brainweb" - ] + "uid": "github/3D-e-Chem/knime-python-node-archetype", + "url": "https://github.com/3D-e-Chem/knime-python-node-archetype", + "rel": "/software/repository/github/3D-e-Chem/knime-python-node-archetype", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Knime Python node archetype", + "topics": [] }, { - "uid": "github/csalyk/spectools_ir", - "url": "https://github.com/csalyk/spectools_ir", - "rel": "/software/repository/github/csalyk/spectools_ir", - "avatar": "https://avatars.githubusercontent.com/u/7980397?v=4", - "description": null, + "uid": "github/3D-e-Chem/tycho-knime-node-archetype", + "url": "https://github.com/3D-e-Chem/tycho-knime-node-archetype", + "rel": "/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Maven archetype for Knime node extension", "topics": [] }, { - "uid": "github/cbroeckl/RAMClustR", - "url": "https://github.com/cbroeckl/RAMClustR", - "rel": "/software/repository/github/cbroeckl/RAMClustR", - "avatar": "https://avatars.githubusercontent.com/u/4959997?v=4", - "description": "Assigning precursor-product ion relationships in indiscriminant MS/MS data", + "uid": "github/3D-e-Chem/knime-python-wrapper", + "url": "https://github.com/3D-e-Chem/knime-python-wrapper", + "rel": "/software/repository/github/3D-e-Chem/knime-python-wrapper", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Utilities for development of KNIME nodes calling Python scripts.", "topics": [] }, { - "uid": "github/agorajs/agora-vpsc", - "url": "https://github.com/agorajs/agora-vpsc", - "rel": "/software/repository/github/agorajs/agora-vpsc", - "avatar": "https://avatars.githubusercontent.com/u/55066786?v=4", - "description": "VPSC adapter for agora-framework", + "uid": "github/3D-e-Chem/knime-plants", + "url": "https://github.com/3D-e-Chem/knime-plants", + "rel": "/software/repository/github/3D-e-Chem/knime-plants", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "KNIME nodes to configure, run and analyze PLANTS protein-ligand docking", "topics": [] }, { - "uid": "github/agorajs/agora-forbid", - "url": "https://github.com/agorajs/agora-forbid", - "rel": "/software/repository/github/agorajs/agora-forbid", - "avatar": "https://avatars.githubusercontent.com/u/55066786?v=4", - "description": null, + "uid": "github/3D-e-Chem/knime-testflow", + "url": "https://github.com/3D-e-Chem/knime-testflow", + "rel": "/software/repository/github/3D-e-Chem/knime-testflow", + "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", + "description": "Test Knime workflows from a Junit test.", "topics": [] }, { - "uid": "github/morispi/LRez", - "url": "https://github.com/morispi/LRez", - "rel": "/software/repository/github/morispi/LRez", - "avatar": "https://avatars.githubusercontent.com/u/26629273?v=4", - "description": "Standalone tool and library allowing to work with barcoded linked-reads", - "topics": [ - "barcode", - "barcodes", - "linked-reads", - "linked", - "reads", - "10x", - "10xgenomics", - "10x-genomics", - "index", - "haplotagging", - "tell-seq", - "stlfr", - "bioinformatics" - ] + "uid": "github/PeterKamphuis/pyFAT-astro", + "url": "https://github.com/PeterKamphuis/pyFAT-astro", + "rel": "/software/repository/github/PeterKamphuis/pyFAT-astro", + "avatar": "https://avatars.githubusercontent.com/u/11264005?v=4", + "description": "Python3 version of FAT. Extensive documentation can be found at https://pyfat-astro.readthedocs.io/en/latest/", + "topics": [] }, { - "uid": "github/ericfell/rfbzero", - "url": "https://github.com/ericfell/rfbzero", - "rel": "/software/repository/github/ericfell/rfbzero", - "avatar": "https://avatars.githubusercontent.com/u/39314565?v=4", - "description": "Redox flow battery electrochemical cycling models in Python", + "uid": "github/PeterKamphuis/FAT", + "url": "https://github.com/PeterKamphuis/FAT", + "rel": "/software/repository/github/PeterKamphuis/FAT", + "avatar": "https://avatars.githubusercontent.com/u/11264005?v=4", + "description": "An IDL/GDL wrapper to automate TiRiFiC", "topics": [ - "batteries", - "battery-models", - "microkinetics", - "python", - "simulation", - "rfbzero" + "gdl", + "fat" ] }, { - "uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", - "url": "https://github.com/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", - "rel": "/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", - "avatar": "https://avatars.githubusercontent.com/u/130669805?v=4", - "description": "BiGGer is a transformation tool and library that translates bigraphical models and rules to GrGen.NET-compatible files. It enables bigraph rewriting using GrGen.NET.", + "uid": "github/matvii/ADAM", + "url": "https://github.com/matvii/ADAM", + "rel": "/software/repository/github/matvii/ADAM", + "avatar": "https://avatars.githubusercontent.com/u/11883500?v=4", + "description": "Software package for asteroid shape reconstruction from disk-resolved observations", "topics": [ - "bigraphs", - "graph-rewriting", - "graph-rewriting-library", - "graph-transformation", - "grgen", - "grgen-net" + "asteroids", + "adaptive-optics", + "shape-reconstruction", + "lightcurves", + "photometry", + "occultations" ] }, { - "uid": "github/ChristopheBerthod/Piecewise.jl", - "url": "https://github.com/ChristopheBerthod/Piecewise.jl", - "rel": "/software/repository/github/ChristopheBerthod/Piecewise.jl", - "avatar": "https://avatars.githubusercontent.com/u/36079222?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/vmmunoza/nuHawkHunter", - "url": "https://github.com/vmmunoza/nuHawkHunter", - "rel": "/software/repository/github/vmmunoza/nuHawkHunter", - "avatar": "https://avatars.githubusercontent.com/u/53861440?v=4", - "description": "Repository with forecast of PBH neutrinos", + "uid": "github/kostergroup/SIMsalabim", + "url": "https://github.com/kostergroup/SIMsalabim", + "rel": "/software/repository/github/kostergroup/SIMsalabim", + "avatar": "https://avatars.githubusercontent.com/u/64084163?v=4", + "description": "A 1D drift-diffusion simulator for semiconductor devices (LEDs, solar cells, diodes, organics, perovskites)", "topics": [] }, { - "uid": "github/davemlz/eemont", - "url": "https://github.com/davemlz/eemont", - "rel": "/software/repository/github/davemlz/eemont", - "avatar": "https://avatars.githubusercontent.com/u/49817852?v=4", - "description": "A python package that extends Google Earth Engine.", + "uid": "github/open-and-sustainable/prismaid", + "url": "https://github.com/open-and-sustainable/prismaid", + "rel": "/software/repository/github/open-and-sustainable/prismaid", + "avatar": "https://avatars.githubusercontent.com/u/170118603?v=4", + "description": "Open Science AI Tools for Systematic, Protocol-Based Literature Reviews", "topics": [ - "google-earth-engine", - "earth-engine", - "google", - "remote-sensing", - "gis", - "geographic-information-systems", - "python", - "python3", - "raster", - "satellite-imagery", - "satellite-images" + "systematic-literature-reviews", + "generative-ai", + "open-science", + "open-source" ] }, { - "uid": "github/mbillingr/libgdf", - "url": "https://github.com/mbillingr/libgdf", - "rel": "/software/repository/github/mbillingr/libgdf", - "avatar": "https://avatars.githubusercontent.com/u/2392396?v=4", - "description": "C++ implementation of GDF - \"a general dataformat for biosignals\" version V2.20.", + "uid": "github/nksaunders/giants", + "url": "https://github.com/nksaunders/giants", + "rel": "/software/repository/github/nksaunders/giants", + "avatar": "https://avatars.githubusercontent.com/u/17130840?v=4", + "description": "Finding Giant Planets in TESS FFIs", "topics": [] }, { - "uid": "github/saigegit/SAIGE", - "url": "https://github.com/saigegit/SAIGE", - "rel": "/software/repository/github/saigegit/SAIGE", - "avatar": "https://avatars.githubusercontent.com/u/98546675?v=4", - "description": "Development for SAIGE and SAIGE-GENE(+)", + "uid": "github/davidpagnon/Sports2D", + "url": "https://github.com/davidpagnon/Sports2D", + "rel": "/software/repository/github/davidpagnon/Sports2D", + "avatar": "https://avatars.githubusercontent.com/u/54667644?v=4", + "description": "Compute 2D human pose and angles from a video or a webcam. ", + "topics": [ + "biomechanics", + "blazepose", + "joint-angles", + "kinematics", + "markerless", + "openpose", + "sports-analytics", + "kinovea", + "pose-estimation", + "rtmpose" + ] + }, + { + "uid": "github/icrar/daliuge", + "url": "https://github.com/ICRAR/daliuge", + "rel": "/software/repository/github/icrar/daliuge", + "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", + "description": "The DALiuGE Execution Engine", "topics": [] }, { - "uid": "github/KorfLab/SNAP", - "url": "https://github.com/KorfLab/SNAP", - "rel": "/software/repository/github/KorfLab/SNAP", - "avatar": "https://avatars.githubusercontent.com/u/2348742?v=4", - "description": "Gene prediction software", + "uid": "github/juanaldayparejo/archnemesis-dist", + "url": "https://github.com/juanaldayparejo/archnemesis-dist", + "rel": "/software/repository/github/juanaldayparejo/archnemesis-dist", + "avatar": "https://avatars.githubusercontent.com/u/67833635?v=4", + "description": "Python version of the NEMESIS radiative transfer and retrieval tool.", "topics": [] }, { - "uid": "github/joachimwolff/Hi-cGAN", - "url": "https://github.com/joachimwolff/Hi-cGAN", - "rel": "/software/repository/github/joachimwolff/Hi-cGAN", - "avatar": "https://avatars.githubusercontent.com/u/13435136?v=4", + "uid": "github/WentaoZhan1998/geospaNN", + "url": "https://github.com/WentaoZhan1998/geospaNN", + "rel": "/software/repository/github/WentaoZhan1998/geospaNN", + "avatar": "https://avatars.githubusercontent.com/u/81460653?v=4", "description": null, "topics": [] }, { - "uid": "github/joachimwolff/hyperparameterScoringHiC", - "url": "https://github.com/joachimwolff/hyperparameterScoringHiC", - "rel": "/software/repository/github/joachimwolff/hyperparameterScoringHiC", - "avatar": "https://avatars.githubusercontent.com/u/13435136?v=4", - "description": "Scoring functions for Hi-C matrix prediction optimization", + "uid": "github/njcuk9999/apero-drs", + "url": "https://github.com/njcuk9999/apero-drs", + "rel": "/software/repository/github/njcuk9999/apero-drs", + "avatar": "https://avatars.githubusercontent.com/u/6008608?v=4", + "description": "A PipelinE to Reduce Observations - The DRS for SPIRou (CFHT)", "topics": [] }, { - "uid": "github/ekiefl/pooltool", - "url": "https://github.com/ekiefl/pooltool", - "rel": "/software/repository/github/ekiefl/pooltool", - "avatar": "https://avatars.githubusercontent.com/u/8688665?v=4", - "description": "A sandbox billiards game that emphasizes realistic physics", - "topics": [ - "billiards", - "panda3d", - "physics", - "pool", - "python", - "snooker", - "simulation", - "eight-ball" + "uid": "github/karllark/DIRTY_dustrt", + "url": "https://github.com/karllark/DIRTY_dustrt", + "rel": "/software/repository/github/karllark/DIRTY_dustrt", + "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", + "description": "DIRTY: 3D dust radiative transfer for dusty astrophysical sources", + "topics": [ + "radiative-transfer", + "radiative-transfer-models", + "monte-carlo", + "interstellar-medium", + "dust" ] }, { - "uid": "github/msolpera/pyUPMASK", - "url": "https://github.com/msolpera/pyUPMASK", - "rel": "/software/repository/github/msolpera/pyUPMASK", - "avatar": "https://avatars.githubusercontent.com/u/49573356?v=4", - "description": "Unsupervised clustering method for stellar clusters.", - "topics": [] - }, - { - "uid": "github/jrenaud90/TidalPy", - "url": "https://github.com/jrenaud90/TidalPy", - "rel": "/software/repository/github/jrenaud90/TidalPy", - "avatar": "https://avatars.githubusercontent.com/u/6547310?v=4", - "description": "Software suite to perform solid-body tidal dissipation calculations for rocky and icy worlds", + "uid": "github/karllark/dust_extinction", + "url": "https://github.com/karllark/dust_extinction", + "rel": "/software/repository/github/karllark/dust_extinction", + "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", + "description": "Astronomical Dust Extinction", "topics": [ - "science-research", - "tides", - "exoplanets", - "planetary-science", - "orbital-mechanics", - "orbital-dynamics" + "dust-extinction", + "extinction", + "astronomy", + "astrophysics", + "astropy", + "dust", + "hacktoberfest" ] }, { - "uid": "github/ferdymercury/amide", - "url": "https://github.com/ferdymercury/amide", - "rel": "/software/repository/github/ferdymercury/amide", - "avatar": "https://avatars.githubusercontent.com/u/10653970?v=4", - "description": "AMIDE: a Medical Imaging Data Examiner", - "topics": [] - }, - { - "uid": "github/vipinagrawal25/MeMC", - "url": "https://github.com/vipinagrawal25/MeMC", - "rel": "/software/repository/github/vipinagrawal25/MeMC", - "avatar": "https://avatars.githubusercontent.com/u/58880095?v=4", - "description": "The software mainly has three sections:", - "topics": [] + "uid": "github/karllark/measure_extinction", + "url": "https://github.com/karllark/measure_extinction", + "rel": "/software/repository/github/karllark/measure_extinction", + "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", + "description": "Measure interstellar dust extinction using pair method", + "topics": [ + "hacktoberfest" + ] }, { - "uid": "github/orbisgis/lczexplore", - "url": "https://github.com/orbisgis/lczexplore", - "rel": "/software/repository/github/orbisgis/lczexplore", - "avatar": "https://avatars.githubusercontent.com/u/9842346?v=4", - "description": null, + "uid": "github/hamidnpc/Neloura", + "url": "https://github.com/hamidnpc/Neloura", + "rel": "/software/repository/github/hamidnpc/Neloura", + "avatar": "https://avatars.githubusercontent.com/u/3179916?v=4", + "description": "FITS File Visualization, Cataloging, and Interaction Tool", "topics": [ - "climate-change", - "environment", - "r-spatial", - "geoclimate" + "astronomy" ] }, { - "uid": "github/spectrapepper/spectrapepper", - "url": "https://github.com/spectrapepper/spectrapepper", - "rel": "/software/repository/github/spectrapepper/spectrapepper", - "avatar": "https://avatars.githubusercontent.com/u/91056904?v=4", - "description": "A Python package for advanced processing and combinatorial analysis of spectroscopy data.", + "uid": "github/mpiersonsmela/SeqVerify", + "url": "https://github.com/mpiersonsmela/SeqVerify", + "rel": "/software/repository/github/mpiersonsmela/SeqVerify", + "avatar": "https://avatars.githubusercontent.com/u/62316569?v=4", + "description": "Analyzes whole genome sequencing data for gene-editing verification", "topics": [] }, { - "uid": "github/sanjibs/bmcmc", - "url": "https://github.com/sanjibs/bmcmc", - "rel": "/software/repository/github/sanjibs/bmcmc", - "avatar": "https://avatars.githubusercontent.com/u/1036754?v=4", - "description": "MCMC package for Bayesian data analysis", + "uid": "github/kmsurrao/reMASTERed", + "url": "https://github.com/kmsurrao/reMASTERed", + "rel": "/software/repository/github/kmsurrao/reMASTERed", + "avatar": "https://avatars.githubusercontent.com/u/35614246?v=4", + "description": "Calculate contributions to pseudo-Cl for maps with correlated masks, based on https://arxiv.org/abs/2302.05436", "topics": [] }, { - "uid": "github/mostanes/umbrella2", - "url": "https://github.com/mostanes/umbrella2", - "rel": "/software/repository/github/mostanes/umbrella2", - "avatar": "https://avatars.githubusercontent.com/u/26716644?v=4", - "description": "Highly modular open-source asteroid detection library written under dotnet.", + "uid": "github/pelican/pelican", + "url": "https://github.com/pelican/pelican", + "rel": "/software/repository/github/pelican/pelican", + "avatar": "https://avatars.githubusercontent.com/u/144586?v=4", + "description": "Pipeline for Extensible Lightweight Imaging and CAlibratioN", "topics": [] }, { - "uid": "github/panoptes-organization/panoptes", - "url": "https://github.com/panoptes-organization/panoptes", - "rel": "/software/repository/github/panoptes-organization/panoptes", - "avatar": "https://avatars3.githubusercontent.com/u/57643851?v=4", - "description": "Monitor computational workflows in real time", - "topics": [ - "workflows", - "bioinformatics", - "reproducible-research", - "biohackeu20", - "biohackeu19", - "snakemake" - ] - }, - { - "uid": "github/jnktsj/DNApi", - "url": "https://github.com/jnktsj/DNApi", - "rel": "/software/repository/github/jnktsj/DNApi", - "avatar": "https://avatars.githubusercontent.com/u/5141643?v=4", - "description": "De novo adapter prediction algorithm for small RNA sequencing data", + "uid": "github/KeckObservatory/tilsotua", + "url": "https://github.com/KeckObservatory/tilsotua", + "rel": "/software/repository/github/KeckObservatory/tilsotua", + "avatar": "https://avatars.githubusercontent.com/u/33301640?v=4", + "description": null, "topics": [] }, { - "uid": "github/finagle29/DBSP_DRP", - "url": "https://github.com/finagle29/DBSP_DRP", - "rel": "/software/repository/github/finagle29/DBSP_DRP", - "avatar": "https://avatars.githubusercontent.com/u/5816532?v=4", - "description": "Fully-automated data reduction pipeline for DBSP built with PypeIt", + "uid": "github/csj607/STaRS", + "url": "https://github.com/csj607/STaRS", + "rel": "/software/repository/github/csj607/STaRS", + "avatar": "https://avatars.githubusercontent.com/u/52664937?v=4", + "description": "Sejong Radiative Transfer through Raman and Rayleigh Scattering with atomic hydrogen", "topics": [] }, { - "uid": "github/astroML/gatspy", - "url": "https://github.com/astroML/gatspy", - "rel": "/software/repository/github/astroML/gatspy", - "avatar": "https://avatars.githubusercontent.com/u/1971246?v=4", - "description": "General tools for Astronomical Time Series in Python", + "uid": "github/xszhu-lab/AGImpute", + "url": "https://github.com/xszhu-lab/AGImpute", + "rel": "/software/repository/github/xszhu-lab/AGImpute", + "avatar": "https://avatars.githubusercontent.com/u/65640906?v=4", + "description": "A composite structure model for single-cell RNA-seq imputation", "topics": [] }, { - "uid": "github/mtsch/Ripserer.jl", - "url": "https://github.com/mtsch/Ripserer.jl", - "rel": "/software/repository/github/mtsch/Ripserer.jl", - "avatar": "https://avatars0.githubusercontent.com/u/7646525?v=4", - "description": "Ripser and Ripserer", - "topics": [ - "persistent-homology", - "topological-data-analysis", - "homology", - "cohomology", - "tda", - "ripser", - "julia", - "topology" - ] + "uid": "github/travisseymour/EPICpy", + "url": "https://github.com/travisseymour/EPICpy", + "rel": "/software/repository/github/travisseymour/EPICpy", + "avatar": "https://avatars.githubusercontent.com/u/1205358?v=4", + "description": "Cross Platform Python Interface for EPIC modeling using C++ EPIClib backend", + "topics": [] }, { - "uid": "github/PASTAQ-MS/PASTAQ", - "url": "https://github.com/PASTAQ-MS/PASTAQ", - "rel": "/software/repository/github/PASTAQ-MS/PASTAQ", - "avatar": "https://avatars.githubusercontent.com/u/82393501?v=4", - "description": "Pipelines and Systems for Threshold Avoiding Quantification of LC-MS/MS data", + "uid": "github/lbr-stack/lbr_stack_doc", + "url": "https://github.com/lbr-stack/lbr_stack_doc", + "rel": "/software/repository/github/lbr-stack/lbr_stack_doc", + "avatar": "https://avatars.githubusercontent.com/u/129968146?v=4", + "description": "Documentation for the LBR-Stack", "topics": [] }, { - "uid": "github/zhoux85/scAdapt", - "url": "https://github.com/zhoux85/scAdapt", - "rel": "/software/repository/github/zhoux85/scAdapt", - "avatar": "https://avatars.githubusercontent.com/u/31464727?v=4", - "description": null, - "topics": [] + "uid": "github/MESAHub/mesa", + "url": "https://github.com/MESAHub/mesa", + "rel": "/software/repository/github/MESAHub/mesa", + "avatar": "https://avatars.githubusercontent.com/u/13661175?v=4", + "description": "Modules for Experiments in Stellar Astrophysics", + "topics": [ + "stellar-evolution", + "binary-evolution", + "astrophysics", + "astronomy", + "stellar-astrophysics", + "fortran" + ] }, { - "uid": "github/t-brandt/acorns-adi", - "url": "https://github.com/t-brandt/acorns-adi", - "rel": "/software/repository/github/t-brandt/acorns-adi", - "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", - "description": "A software package to reduce angular differential imaging data from Subaru/HiCIAO", + "uid": "github/chrisaberson/BetterReg", + "url": "https://github.com/chrisaberson/BetterReg", + "rel": "/software/repository/github/chrisaberson/BetterReg", + "avatar": "https://avatars.githubusercontent.com/u/18057823?v=4", + "description": "Better statistics for regression (OLS and logistic)", "topics": [] }, { - "uid": "github/t-brandt/fitramp", - "url": "https://github.com/t-brandt/fitramp", - "rel": "/software/repository/github/t-brandt/fitramp", - "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", - "description": "Fit a ramp to a series of nondestructive reads, detect and reject jumps.", + "uid": "github/Rostlab/ConSurf", + "url": "https://github.com/Rostlab/ConSurf", + "rel": "/software/repository/github/Rostlab/ConSurf", + "avatar": "https://avatars.githubusercontent.com/u/4093405?v=4", + "description": "Evolutionary conservation estimation of residues or nucleotides", "topics": [] }, { - "uid": "github/t-brandt/orvara", - "url": "https://github.com/t-brandt/orvara", - "rel": "/software/repository/github/t-brandt/orvara", - "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", - "description": null, - "topics": [] + "uid": "github/ghislainv/forestatrisk", + "url": "https://github.com/ghislainv/forestatrisk", + "rel": "/software/repository/github/ghislainv/forestatrisk", + "avatar": "https://avatars.githubusercontent.com/u/4931332?v=4", + "description": ":package: :snake: Python package to model and forecast the risk of deforestation", + "topics": [ + "python", + "land-use-change", + "spatial-modelling", + "spatial-analysis", + "forecasting", + "spatial-autocorrelation", + "tropical-forests", + "roads", + "protected-areas", + "biodiversity-scenario", + "ipbes", + "co2-emissions", + "ipcc", + "forest-cover-change", + "deforestation", + "deforestation-risk", + "redd" + ] }, { - "uid": "github/wathela/FIRST-CLASSIFIER", - "url": "https://github.com/wathela/FIRST-CLASSIFIER", - "rel": "/software/repository/github/wathela/FIRST-CLASSIFIER", - "avatar": "https://avatars.githubusercontent.com/u/20660576?v=4", - "description": "FIRST Classifier: Compact and Extended Radio Galaxies Classification using Deep Convolutional Neural Networks", + "uid": "github/aboucaud/pypher", + "url": "https://github.com/aboucaud/pypher", + "rel": "/software/repository/github/aboucaud/pypher", + "avatar": "https://avatars.githubusercontent.com/u/3065310?v=4", + "description": "PSF Homogenization kERnels", "topics": [] }, { - "uid": "github/wathela/PyMerger", - "url": "https://github.com/wathela/PyMerger", - "rel": "/software/repository/github/wathela/PyMerger", - "avatar": "https://avatars.githubusercontent.com/u/20660576?v=4", - "description": null, + "uid": "github/radwinskis/RadGEEToolbox", + "url": "https://github.com/radwinskis/RadGEEToolbox", + "rel": "/software/repository/github/radwinskis/RadGEEToolbox", + "avatar": "https://avatars.githubusercontent.com/u/78708345?v=4", + "description": "Python package simplifying large-scale operations using Google Earth Engine (GEE) for users who utilize Landsat and Sentinel", "topics": [] }, { - "uid": "github/zonca/dst", - "url": "https://github.com/zonca/dst", - "rel": "/software/repository/github/zonca/dst", - "avatar": "https://avatars.githubusercontent.com/u/383090?v=4", - "description": null, + "uid": "github/CRG-CNAG/anubis", + "url": "https://github.com/CRG-CNAG/anubis", + "rel": "/software/repository/github/CRG-CNAG/anubis", + "avatar": "https://avatars.githubusercontent.com/u/16474917?v=4", + "description": "Python package for the analysis of tn-seq data", "topics": [] }, { - "uid": "github/zonca/python-qucs", - "url": "https://github.com/zonca/python-qucs", - "rel": "/software/repository/github/zonca/python-qucs", - "avatar": "https://avatars.githubusercontent.com/u/383090?v=4", - "description": "QUCS, (http://qucs.sf.net), is a powerful open-source circuit simulator, python-qucs is a Python package that allows to automate the process of preparing input netlists for several simulations, run them, and export the results.", + "uid": "github/lxvm/AutoBZ.jl", + "url": "https://github.com/lxvm/AutoBZ.jl", + "rel": "/software/repository/github/lxvm/AutoBZ.jl", + "avatar": "https://avatars.githubusercontent.com/u/66997677?v=4", + "description": "Automatic and adaptive BZ integration for electronic properties", "topics": [] }, { - "uid": "github/tcherninceline/PPInteractions", - "url": "https://github.com/tcherninceline/PPInteractions", - "rel": "/software/repository/github/tcherninceline/PPInteractions", - "avatar": "https://avatars.githubusercontent.com/u/11919405?v=4", - "description": null, + "uid": "github/milnus/Corekaburra", + "url": "https://github.com/milnus/Corekaburra", + "rel": "/software/repository/github/milnus/Corekaburra", + "avatar": "https://avatars.githubusercontent.com/u/44769523?v=4", + "description": "Program to find core gene consensus synteny, hotspots between these, and construct spatially aware multiple sequence alignments of core genes ", "topics": [] }, { - "uid": "github/Stuermer/EchelleSimulator", - "url": "https://github.com/Stuermer/EchelleSimulator", - "rel": "/software/repository/github/Stuermer/EchelleSimulator", - "avatar": "https://avatars.githubusercontent.com/u/6728233?v=4", - "description": null, + "uid": "github/milnus/Magphi", + "url": "https://github.com/milnus/Magphi", + "rel": "/software/repository/github/milnus/Magphi", + "avatar": "https://avatars.githubusercontent.com/u/44769523?v=4", + "description": "Tool intended to pull out sequences and annotations between insertion sites specified by the user.", "topics": [ - "spectrograph", - "zemax", - "echelle-simulation" + "insertion-sites", + "annotations", + "mobile-genetic-elements", + "bacterial-genomes", + "prokaryotic-genomes" ] }, { - "uid": "github/grahambell/pymoc", - "url": "https://github.com/grahambell/pymoc", - "rel": "/software/repository/github/grahambell/pymoc", - "avatar": "https://avatars.githubusercontent.com/u/1649796?v=4", - "description": "Multi-Order Coverage map module for Python", + "uid": "github/nifty-ppl/nifty", + "url": "https://github.com/NIFTy-PPL/NIFTy", + "rel": "/software/repository/github/nifty-ppl/nifty", + "avatar": "https://avatars.githubusercontent.com/u/151748361?v=4", + "description": "Probabilistic programming framework for signal inference algorithms that operate regardless of the underlying grids and their resolutions", "topics": [] }, - { - "uid": "github/jolie/tquery", - "url": "https://github.com/jolie/tquery", - "rel": "/software/repository/github/jolie/tquery", - "avatar": "https://avatars.githubusercontent.com/u/10729718?v=4", - "description": "A data-query framework based on a sound variant of the MongoDB aggregation framework", - "topics": [ - "jolie", - "microservices", - "data-handling", - "ephemeral" - ] - }, { "uid": "github/vdemichev/DiaNN", "url": "https://github.com/vdemichev/DiaNN", @@ -15259,2218 +14829,2070 @@ "topics": [] }, { - "uid": "github/KonstantinLeyde/light", - "url": "https://github.com/KonstantinLeyde/light", - "rel": "/software/repository/github/KonstantinLeyde/light", - "avatar": "https://avatars.githubusercontent.com/u/181947797?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/vle-prtc/rbef-prtc", - "url": "https://github.com/vle-prtc/rbef-prtc", - "rel": "/software/repository/github/vle-prtc/rbef-prtc", - "avatar": "https://avatars.githubusercontent.com/u/245275286?v=4", - "description": "Material computacional utilizado na realiza\u00e7\u00e3o de superf\u00edcies e trajet\u00f3rias no problema restrito de tr\u00eas corpos. Foram utilizados o Wolfram Mathematica 13.3 e o Mathworks MATLAB R2023b.", + "uid": "github/mrline/CHIMERA", + "url": "https://github.com/mrline/CHIMERA", + "rel": "/software/repository/github/mrline/CHIMERA", + "avatar": "https://avatars.githubusercontent.com/u/23504081?v=4", + "description": "Atmospheric Retrieval Codes for Exoplanets", "topics": [] }, { - "uid": "github/indralab/pybiopax", - "url": "https://github.com/indralab/pybiopax", - "rel": "/software/repository/github/indralab/pybiopax", - "avatar": "https://avatars.githubusercontent.com/u/41387246?v=4", - "description": "PyBioPAX: A python implementation of the BioPAX object model", + "uid": "github/SWE-UniStuttgart/Qlunc", + "url": "https://github.com/SWE-UniStuttgart/Qlunc", + "rel": "/software/repository/github/SWE-UniStuttgart/Qlunc", + "avatar": "https://avatars.githubusercontent.com/u/36884435?v=4", + "description": "A numerical framework to estimate hardware and data processing uncertainties of a lidar device", "topics": [ - "python", - "biopax", - "biology", - "systems-biology" + "uncertainty", + "wind-lidar", + "openlidar" ] }, { - "uid": "github/LeandroOrdonez/explora-vr-dash-client", - "url": "https://github.com/LeandroOrdonez/explora-vr-dash-client", - "rel": "/software/repository/github/LeandroOrdonez/explora-vr-dash-client", - "avatar": "https://avatars.githubusercontent.com/u/4668102?v=4", - "description": null, + "uid": "github/evanoconnor/GR1D", + "url": "https://github.com/evanoconnor/GR1D", + "rel": "/software/repository/github/evanoconnor/GR1D", + "avatar": "https://avatars.githubusercontent.com/u/1109332?v=4", + "description": "General Relativistic, Spherically Symmetry, Neutrino Transport Code for Stellar Collapse", "topics": [] }, { - "uid": "github/pangeo-data/climpred", - "url": "https://github.com/pangeo-data/climpred", - "rel": "/software/repository/github/pangeo-data/climpred", - "avatar": "https://avatars.githubusercontent.com/u/23299451?v=4", - "description": ":earth_americas: Verification of weather and climate forecasts. :earth_africa:", - "topics": [ - "python", - "climate", - "climate-analysis", - "prediction", - "xarray", - "dask", - "pangeo" - ] + "uid": "github/VU-IVM/VineCopulas", + "url": "https://github.com/VU-IVM/VineCopulas", + "rel": "/software/repository/github/VU-IVM/VineCopulas", + "avatar": "https://avatars.githubusercontent.com/u/56406868?v=4", + "description": "A pure python implementation for vine copulas", + "topics": [] }, { - "uid": "github/tomoyukif/MCPtaggR", - "url": "https://github.com/tomoyukif/MCPtaggR", - "rel": "/software/repository/github/tomoyukif/MCPtaggR", - "avatar": "https://avatars.githubusercontent.com/u/40555133?v=4", - "description": null, + "uid": "github/yapenzhang/excalibuhr", + "url": "https://github.com/yapenzhang/excalibuhr", + "rel": "/software/repository/github/yapenzhang/excalibuhr", + "avatar": "https://avatars.githubusercontent.com/u/45408119?v=4", + "description": "A pipeline for high-resolution spectral data reduction", "topics": [] }, { - "uid": "github/JiangFangzhou/SIDM", - "url": "https://github.com/JiangFangzhou/SIDM", - "rel": "/software/repository/github/JiangFangzhou/SIDM", - "avatar": "https://avatars.githubusercontent.com/u/6954718?v=4", - "description": "analytical model for the density profiles of self-interacting dark-matter halos with inhabitant galaxies", - "topics": [] + "uid": "github/benlansdell/ethome", + "url": "https://github.com/benlansdell/ethome", + "rel": "/software/repository/github/benlansdell/ethome", + "avatar": "https://avatars.githubusercontent.com/u/7505975?v=4", + "description": "Tools for machine learning of animal behavior", + "topics": [ + "boris", + "dlc", + "pose-tracking", + "supervised-learning", + "deeplabcut", + "neurodata-without-borders", + "ndx-pose" + ] }, { - "uid": "github/jo276/EvapMass", - "url": "https://github.com/jo276/EvapMass", - "rel": "/software/repository/github/jo276/EvapMass", - "avatar": "https://avatars.githubusercontent.com/u/1316165?v=4", - "description": null, + "uid": "github/insightsengineering/rbmi", + "url": "https://github.com/insightsengineering/rbmi", + "rel": "/software/repository/github/insightsengineering/rbmi", + "avatar": "https://avatars.githubusercontent.com/u/80070020?v=4", + "description": "Reference based multiple imputation R package", "topics": [] }, { - "uid": "github/brandonckelly/carma_pack", - "url": "https://github.com/brandonckelly/carma_pack", - "rel": "/software/repository/github/brandonckelly/carma_pack", - "avatar": "https://avatars.githubusercontent.com/u/3742948?v=4", - "description": "MCMC Sampler for Performing Bayesian Inference on Continuous Time Autoregressive Models.", + "uid": "github/mjuvela/ISM", + "url": "https://github.com/mjuvela/ISM", + "rel": "/software/repository/github/mjuvela/ISM", + "avatar": "https://avatars.githubusercontent.com/u/46849781?v=4", + "description": "Various programs related to interstellar medium (ISM) studies", "topics": [] }, { - "uid": "github/lastz/lastz", - "url": "https://github.com/lastz/lastz", - "rel": "/software/repository/github/lastz/lastz", - "avatar": "https://avatars.githubusercontent.com/u/20935716?v=4", - "description": "Program for aligning DNA sequences, a pairwise aligner.", + "uid": "github/sebhaan/geobo", + "url": "https://github.com/sebhaan/geobo", + "rel": "/software/repository/github/sebhaan/geobo", + "avatar": "https://avatars.githubusercontent.com/u/13387042?v=4", + "description": "Python package for Multi-Objective Bayesian Optimisation and Joint Inversion", "topics": [] }, { - "uid": "github/mathopt/DynamicOED.jl", - "url": "https://github.com/mathopt/DynamicOED.jl", - "rel": "/software/repository/github/mathopt/DynamicOED.jl", - "avatar": "https://avatars.githubusercontent.com/u/98813390?v=4", - "description": "Optimal experimental design of ODE and DAE systems in julia", + "uid": "github/flekschas/regl-scatterplot", + "url": "https://github.com/flekschas/regl-scatterplot", + "rel": "/software/repository/github/flekschas/regl-scatterplot", + "avatar": "https://avatars.githubusercontent.com/u/932103?v=4", + "description": "Scalable WebGL-based scatter plot library build with Regl", "topics": [ - "mixed-integer-programming", - "optimal-control", - "optimal-experimental-design", - "sciml" + "scatterplot", + "visualization", + "2d", + "webgl", + "regl", + "scatter-plot" ] }, { - "uid": "github/Libensemble/libensemble", - "url": "https://github.com/Libensemble/libensemble", - "rel": "/software/repository/github/Libensemble/libensemble", - "avatar": "https://avatars.githubusercontent.com/u/24534232?v=4", - "description": "A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.", - "topics": [] + "uid": "github/flekschas/jupyter-scatter", + "url": "https://github.com/flekschas/jupyter-scatter", + "rel": "/software/repository/github/flekschas/jupyter-scatter", + "avatar": "https://avatars.githubusercontent.com/u/932103?v=4", + "description": "Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!", + "topics": [ + "scatter-plot", + "visualization", + "jupyterlab-extension", + "jupyter-notebook-extension" + ] }, { - "uid": "github/HorvathLab/ReQTL", - "url": "https://github.com/HorvathLab/ReQTL", - "rel": "/software/repository/github/HorvathLab/ReQTL", - "avatar": "https://avatars0.githubusercontent.com/u/15271573?v=4", - "description": "ReQTL: Identifying correlations between expressed SNVs and gene expression using RNA-sequencing data", + "uid": "github/danielreardon/scintools", + "url": "https://github.com/danielreardon/scintools", + "rel": "/software/repository/github/danielreardon/scintools", + "avatar": "https://avatars.githubusercontent.com/u/40694862?v=4", + "description": "Tools for analysing of pulsar scintillations ", "topics": [] }, { - "uid": "github/kinnala/scikit-fem", - "url": "https://github.com/kinnala/scikit-fem", - "rel": "/software/repository/github/kinnala/scikit-fem", - "avatar": "https://avatars2.githubusercontent.com/u/973268?v=4", - "description": "Simple finite element assemblers for Python", + "uid": "github/rferdman/afr", + "url": "https://github.com/rferdman/afr", + "rel": "/software/repository/github/rferdman/afr", + "avatar": "https://avatars.githubusercontent.com/u/1636743?v=4", + "description": "Software package that includes various routines and tools allowing the user to reduce, process, and manipulate pulsar data, and create times-of-arrival compatible with tempo and tempo2 timing software. ", "topics": [] }, { - "uid": "github/INRS-France/predicting_alarm_audibility", - "url": "https://github.com/INRS-France/predicting_alarm_audibility", - "rel": "/software/repository/github/INRS-France/predicting_alarm_audibility", - "avatar": "https://avatars.githubusercontent.com/u/157127585?v=4", - "description": "This Python code is derived from the research article \"Evaluating and Predicting the Audibility of Acoustic Alarms in the Workplace Using Experimental Methods and Deep Learning\" published in the journal Applied Acoustics. It provides a framework for predicting the audibility of acoustic alarms in noise, and includes scripts to reproduce the results", - "topics": [ - "audibility", - "alarms", - "convolutional-neural-network", - "dataset", - "psychoacoustics", - "occupational-noise" - ] - }, - { - "uid": "github/mdruett/COCOPLOT", - "url": "https://github.com/mdruett/COCOPLOT", - "rel": "/software/repository/github/mdruett/COCOPLOT", - "avatar": "https://avatars.githubusercontent.com/u/42343001?v=4", - "description": "COlor COllapsed PLOTting quick-look and context image software is designed to convey spectral profile information from all of the spatial pixels in a 3D datacube as a single image, using color.", + "uid": "github/PBjam-projects/PBjam", + "url": "https://github.com/PBjam-projects/PBjam", + "rel": "/software/repository/github/PBjam-projects/PBjam", + "avatar": "https://avatars.githubusercontent.com/u/229987229?v=4", + "description": "A repo for our peak baggin code and tips on jam", "topics": [] }, { - "uid": "github/ebmonson/2DFFTUtils-Module", - "url": "https://github.com/ebmonson/2DFFTUtils-Module", - "rel": "/software/repository/github/ebmonson/2DFFTUtils-Module", - "avatar": "https://avatars.githubusercontent.com/u/12664505?v=4", - "description": "A Python module implementation of some tasks associated with measuring spiral galaxy pitch angle with 2DFFT. To be merged into the 2dfft_utils repository at a later date. TODO: Rename package and repository to SpiralUtils.", + "uid": "github/Higgins00/TESS-Localize", + "url": "https://github.com/Higgins00/TESS-Localize", + "rel": "/software/repository/github/Higgins00/TESS-Localize", + "avatar": "https://avatars.githubusercontent.com/u/43622895?v=4", + "description": "Code for localizing variable star signatures in TESS Photometry", "topics": [] }, { - "uid": "github/BGI-Qingdao/TGS-GapCloser", - "url": "https://github.com/BGI-Qingdao/TGS-GapCloser", - "rel": "/software/repository/github/BGI-Qingdao/TGS-GapCloser", - "avatar": "https://avatars.githubusercontent.com/u/39953106?v=4", - "description": "A gap-closing software tool that uses long reads to enhance genome assembly.", - "topics": [] + "uid": "github/chanzuckerberg/idseq-dag", + "url": "https://github.com/chanzuckerberg/czid-dag", + "rel": "/software/repository/github/chanzuckerberg/idseq-dag", + "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", + "description": "Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.", + "topics": [ + "genomics", + "infectious-diseases", + "idseq" + ] }, { - "uid": "github/giuspugl/picasso", - "url": "https://github.com/giuspugl/picasso", - "rel": "/software/repository/github/giuspugl/picasso", - "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", - "description": "Inpainter for point-sources for Synchrotron and Dust polarization ", - "topics": [] + "uid": "github/chanzuckerberg/cellxgene", + "url": "https://github.com/chanzuckerberg/cellxgene", + "rel": "/software/repository/github/chanzuckerberg/cellxgene", + "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", + "description": "an interactive explorer for single-cell transcriptomics data", + "topics": [ + "scientific", + "visualization", + "scrna-seq", + "transcriptomics", + "dataviz" + ] }, { - "uid": "github/giuspugl/MCMole3D", - "url": "https://github.com/giuspugl/MCMole3D", - "rel": "/software/repository/github/giuspugl/MCMole3D", - "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", - "description": "MonteCarlo Molecular Line Emission 3d.Statistical Model for Galactic Molecular Clouds. For documentation please visit", - "topics": [] + "uid": "github/chanzuckerberg/shasta", + "url": "https://github.com/chanzuckerberg/shasta", + "rel": "/software/repository/github/chanzuckerberg/shasta", + "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", + "description": "De novo assembly from Oxford Nanopore reads.", + "topics": [ + "dna", + "sequencing", + "assembly", + "nanopore", + "pacbio", + "long-read", + "de-novo" + ] }, { - "uid": "github/giuspugl/COnet", - "url": "https://github.com/giuspugl/COnet", - "rel": "/software/repository/github/giuspugl/COnet", - "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", - "description": null, - "topics": [] + "uid": "github/GWang2022/iGDP", + "url": "https://github.com/GWang2022/iGDP", + "rel": "/software/repository/github/GWang2022/iGDP", + "avatar": "https://avatars.githubusercontent.com/u/107245708?v=4", + "description": "An integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes", + "topics": [ + "genomics", + "bioinformatics" + ] }, { - "uid": "github/giuspugl/fgcluster", - "url": "https://github.com/giuspugl/fgcluster", - "rel": "/software/repository/github/giuspugl/fgcluster", - "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", - "description": null, - "topics": [] + "uid": "github/Martinsos/edlib", + "url": "https://github.com/Martinsos/edlib", + "rel": "/software/repository/github/Martinsos/edlib", + "avatar": "https://avatars.githubusercontent.com/u/1536647?v=4", + "description": "Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.", + "topics": [ + "sequence-alignment", + "edit-distance", + "levehnstein-distance", + "library", + "c-plus-plus", + "alignment-path", + "python", + "bioinformatics" + ] }, { - "uid": "github/ElectionDataAnalysis/electiondata", - "url": "https://github.com/ElectionDataAnalysis/electiondata", - "rel": "/software/repository/github/ElectionDataAnalysis/electiondata", - "avatar": "https://avatars.githubusercontent.com/u/70550634?v=4", - "description": "Tools for consolidation and analysis of raw election results from the most reliable sources -- the election agencies themselves.", + "uid": "github/carronj/plancklens", + "url": "https://github.com/carronj/plancklens", + "rel": "/software/repository/github/carronj/plancklens", + "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", + "description": "Planck 2018 lensing pipeline", "topics": [ - "election", - "election-data", - "common-data-format" + "cosmology", + "cosmic-microwave-background", + "gravitational-lensing", + "python-package" ] }, { - "uid": "github/mary77/scQcut", - "url": "https://github.com/mary77/scQcut", - "rel": "/software/repository/github/mary77/scQcut", - "avatar": "https://avatars.githubusercontent.com/u/12682250?v=4", - "description": "A completely parameter-free method for graph-based single cell RNA-seq clustering", + "uid": "github/carronj/LensIt", + "url": "https://github.com/carronj/LensIt", + "rel": "/software/repository/github/carronj/LensIt", + "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", + "description": null, "topics": [] }, { - "uid": "github/PopMedNet-Team/popmednet", - "url": "https://github.com/PopMedNet-Team/popmednet", - "rel": "/software/repository/github/PopMedNet-Team/popmednet", - "avatar": "https://avatars.githubusercontent.com/u/12749811?v=4", - "description": "This is the repository for the open source code of the distributed data network platform PopMedNet", + "uid": "github/carronj/lenspyx", + "url": "https://github.com/carronj/lenspyx", + "rel": "/software/repository/github/carronj/lenspyx", + "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", + "description": "Curved-sky python lensed CMB maps simulation package", "topics": [] }, { - "uid": "github/ICSC-Spoke3/NP_TMcode", - "url": "https://github.com/ICSC-Spoke3/NP_TMcode", - "rel": "/software/repository/github/ICSC-Spoke3/NP_TMcode", - "avatar": "https://avatars.githubusercontent.com/u/156100237?v=4", + "uid": "github/icredd-cheminfo/CGRdb2", + "url": "https://github.com/icredd-cheminfo/CGRdb2", + "rel": "/software/repository/github/icredd-cheminfo/CGRdb2", + "avatar": "https://avatars.githubusercontent.com/u/72447540?v=4", "description": null, "topics": [] }, { - "uid": "github/raphael-group/chisel", - "url": "https://github.com/raphael-group/chisel", - "rel": "/software/repository/github/raphael-group/chisel", - "avatar": "https://avatars.githubusercontent.com/u/5168500?v=4", - "description": "CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links", + "uid": "github/introlab/opentera", + "url": "https://github.com/introlab/opentera", + "rel": "/software/repository/github/introlab/opentera", + "avatar": "https://avatars.githubusercontent.com/u/1263458?v=4", + "description": "OpenTera - Open TeleRehabilitation Server and Micro-Services", + "topics": [ + "python", + "server", + "healthcare", + "iot", + "telerehabilitation", + "telepresence", + "videoconference", + "micro-services", + "webrtc", + "redis", + "flask", + "twisted", + "robotics" + ] + }, + { + "uid": "github/cdfortenbach/JET", + "url": "https://github.com/cdfortenbach/JET", + "rel": "/software/repository/github/cdfortenbach/JET", + "avatar": "https://avatars.githubusercontent.com/u/52048879?v=4", + "description": "Computer tool that can be used to optimize lists of exoplanet targets for atmospheric characterization by JWST.", "topics": [] }, { - "uid": "github/raphael-group/hatchet", - "url": "https://github.com/raphael-group/hatchet", - "rel": "/software/repository/github/raphael-group/hatchet", - "avatar": "https://avatars.githubusercontent.com/u/5168500?v=4", - "description": "HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.", + "uid": "github/Mulan-94/smops", + "url": "https://github.com/Mulan-94/smops", + "rel": "/software/repository/github/Mulan-94/smops", + "avatar": "https://avatars.githubusercontent.com/u/12611059?v=4", + "description": "Interpolate FITS model images over higher frequency intervals", "topics": [] }, { - "uid": "github/gabraham/flashpca", - "url": "https://github.com/gabraham/flashpca", - "rel": "/software/repository/github/gabraham/flashpca", - "avatar": "https://avatars.githubusercontent.com/u/465091?v=4", - "description": "Fast Principal Component Analysis of Large-Scale Genome-Wide Data", + "uid": "github/efpl-columbia/PointClouds.jl", + "url": "https://github.com/efpl-columbia/PointClouds.jl", + "rel": "/software/repository/github/efpl-columbia/PointClouds.jl", + "avatar": "https://avatars.githubusercontent.com/u/81380630?v=4", + "description": "Fast & flexible processing of lidar point-cloud data", + "topics": [ + "julia", + "lidar", + "point-cloud" + ] + }, + { + "uid": "github/paulmorio/gincco", + "url": "https://github.com/paulmorio/gincco", + "rel": "/software/repository/github/paulmorio/gincco", + "avatar": "https://avatars.githubusercontent.com/u/3254542?v=4", + "description": "Source code for GINCCo Paper", "topics": [] }, { - "uid": "github/statOmics/satuRnPaper", - "url": "https://github.com/statOmics/satuRnPaper", - "rel": "/software/repository/github/statOmics/satuRnPaper", - "avatar": "https://avatars.githubusercontent.com/u/24431387?v=4", - "description": "Github repository associated with the publication of *satuRn: Scalable Analysis of Differential Transcript Usage for Bulk and Single-cell RNA-sequencing Applications*", + "uid": "github/jls713/tact", + "url": "https://github.com/jls713/tact", + "rel": "/software/repository/github/jls713/tact", + "avatar": "https://avatars.githubusercontent.com/u/12542535?v=4", + "description": "action, angle and frequency estimation using various methods", "topics": [] }, { - "uid": "github/statOmics/tradeSeqPaper", - "url": "https://github.com/statOmics/tradeSeqPaper", - "rel": "/software/repository/github/statOmics/tradeSeqPaper", - "avatar": "https://avatars0.githubusercontent.com/u/24431387?v=4", - "description": "Scripts to reproduce analyses of tradeSeq paper.", + "uid": "github/dgrun/FateID", + "url": "https://github.com/dgrun/FateID", + "rel": "/software/repository/github/dgrun/FateID", + "avatar": "https://avatars.githubusercontent.com/u/11157236?v=4", + "description": "R package for the inference of cell fate bias from single-cell RNA-seq data.", "topics": [] }, { - "uid": "github/GeoscienceAustralia/eo-tides", - "url": "https://github.com/GeoscienceAustralia/eo-tides", - "rel": "/software/repository/github/GeoscienceAustralia/eo-tides", - "avatar": "https://avatars.githubusercontent.com/u/4704285?v=4", - "description": "Tide modelling tools for large-scale satellite earth observation analysis", + "uid": "github/mphowardlab/lammpsio", + "url": "https://github.com/mphowardlab/lammpsio", + "rel": "/software/repository/github/mphowardlab/lammpsio", + "avatar": "https://avatars.githubusercontent.com/u/64987711?v=4", + "description": "Python tools for working with LAMMPS files", "topics": [ - "earth-observation", - "ocean-modelling", - "oceanography", - "remote-sensing", - "satellite-data", - "tides", - "coastal", - "coastal-modelling", - "tidesandcurrents", - "tide-modelling" + "python", + "lammps", + "molecular-dynamics" ] }, { - "uid": "github/MonashSmartStructures/ospgrillage", - "url": "https://github.com/MonashSmartStructures/ospgrillage", - "rel": "/software/repository/github/MonashSmartStructures/ospgrillage", - "avatar": "https://avatars.githubusercontent.com/u/53598771?v=4", - "description": "`ospgrillage` is a package that wraps `OpenSeesPy` with an interface dedicated to the development and analysis of regular bridge deck grillage models.", + "uid": "github/muzafferarikan/gNOMO2", + "url": "https://github.com/muzafferarikan/gNOMO2", + "rel": "/software/repository/github/muzafferarikan/gNOMO2", + "avatar": "https://avatars.githubusercontent.com/u/92356412?v=4", + "description": "gNOMO2 allows integrated multi-omics analyses of microbiomes", "topics": [ - "bridge-engineering", - "structural-analysis", - "finite-element-analysis", - "bridges", - "structural-engineering" + "amplicon-sequencing", + "metagenomics", + "metaproteomics", + "metatranscriptomics", + "microbiome", + "multi-omics" ] }, { - "uid": "github/wdecoster/nanoQC", - "url": "https://github.com/wdecoster/nanoQC", - "rel": "/software/repository/github/wdecoster/nanoQC", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Quality control tools for nanopore sequencing data", + "uid": "github/csuhjhjhj/GCNCMI", + "url": "https://github.com/csuhjhjhj/GCNCMI", + "rel": "/software/repository/github/csuhjhjhj/GCNCMI", + "avatar": "https://avatars.githubusercontent.com/u/63285288?v=4", + "description": "CircRNA-miRNA interaction Prediction Based on Graph Neural Network", "topics": [] }, { - "uid": "github/wdecoster/nano-snakemake", - "url": "https://github.com/wdecoster/nano-snakemake", - "rel": "/software/repository/github/wdecoster/nano-snakemake", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "A snakemake pipeline for SV analysis from nanopore genome sequencing", + "uid": "github/cedrus-opensource/pyxid", + "url": "https://github.com/cedrus-opensource/pyxid", + "rel": "/software/repository/github/cedrus-opensource/pyxid", + "avatar": "https://avatars.githubusercontent.com/u/457188?v=4", + "description": "Pure python library for communicating with Cedrus XID devices", "topics": [] }, { - "uid": "github/wdecoster/NanoComp", - "url": "https://github.com/wdecoster/nanocomp", - "rel": "/software/repository/github/wdecoster/NanoComp", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Comparison of multiple long read datasets", + "uid": "github/varchasgopalaswamy/AutoUncertainties", + "url": "https://github.com/varchasgopalaswamy/AutoUncertainties", + "rel": "/software/repository/github/varchasgopalaswamy/AutoUncertainties", + "avatar": "https://avatars.githubusercontent.com/u/2359219?v=4", + "description": "Drop-in Uncertainty Propagation with Automatic Differentiation", "topics": [] }, { - "uid": "github/wdecoster/nanocomp", - "url": "https://github.com/wdecoster/nanocomp", - "rel": "/software/repository/github/wdecoster/nanocomp", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Comparison of multiple long read datasets", + "uid": "github/tonhingm/PHOTOe-v1", + "url": "https://github.com/tonhingm/PHOTOe-v1", + "rel": "/software/repository/github/tonhingm/PHOTOe-v1", + "avatar": "https://avatars.githubusercontent.com/u/120097310?v=4", + "description": null, "topics": [] }, { - "uid": "github/wdecoster/nanomath", - "url": "https://github.com/wdecoster/nanomath", - "rel": "/software/repository/github/wdecoster/nanomath", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "A few simple math function for other Oxford Nanopore processing scripts", + "uid": "github/revoltek/losoto", + "url": "https://github.com/revoltek/losoto", + "rel": "/software/repository/github/revoltek/losoto", + "avatar": "https://avatars.githubusercontent.com/u/4458741?v=4", + "description": "LOFAR solutions tool", "topics": [] }, { - "uid": "github/wdecoster/nanopack", - "url": "https://github.com/wdecoster/nanopack", - "rel": "/software/repository/github/wdecoster/nanopack", - "avatar": "https://avatars2.githubusercontent.com/u/11660522?v=4", - "description": "Easily install all nanopack scripts together", + "uid": "github/mrteetoe/HOI", + "url": "https://github.com/mrteetoe/HOI", + "rel": "/software/repository/github/mrteetoe/HOI", + "avatar": "https://avatars.githubusercontent.com/u/29948143?v=4", + "description": null, "topics": [] }, { - "uid": "github/wdecoster/nanostat", - "url": "https://github.com/wdecoster/nanostat", - "rel": "/software/repository/github/wdecoster/nanostat", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Create statistic summary of an Oxford Nanopore read dataset", + "uid": "github/gourabghoshroy/MPVNN", + "url": "https://github.com/gourabghoshroy/MPVNN", + "rel": "/software/repository/github/gourabghoshroy/MPVNN", + "avatar": "https://avatars.githubusercontent.com/u/10203845?v=4", + "description": "MUTATED PATHWAY VISIBLE NEURAL NETWORK FOR CANCER SPECIFIC SURVIVAL RISK PREDICTION", "topics": [] }, { - "uid": "github/wdecoster/nanolyse", - "url": "https://github.com/wdecoster/nanolyse", - "rel": "/software/repository/github/wdecoster/nanolyse", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Remove lambda phage reads from a fastq file", + "uid": "github/rroyaute/h2_breeders_equation", + "url": "https://github.com/rroyaute/h2_breeders_equation", + "rel": "/software/repository/github/rroyaute/h2_breeders_equation", + "avatar": "https://avatars.githubusercontent.com/u/54351958?v=4", + "description": "Shiny application for interactive Evolution teaching activity on heritability and making use of the Breeder's equation", "topics": [] }, { - "uid": "github/wdecoster/nanofilt", - "url": "https://github.com/wdecoster/nanofilt", - "rel": "/software/repository/github/wdecoster/nanofilt", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Filtering and trimming of long read sequencing data", - "topics": [] + "uid": "github/franciscovillaescusa/Pylians3", + "url": "https://github.com/franciscovillaescusa/Pylians3", + "rel": "/software/repository/github/franciscovillaescusa/Pylians3", + "avatar": "https://avatars.githubusercontent.com/u/4404316?v=4", + "description": "Libraries to analyze numerical simulations (python3)", + "topics": [ + "simulations", + "n-body", + "hydrodynamics", + "power-spectrum", + "bispectrum", + "correlation-functions", + "voids", + "python3", + "cython", + "c", + "density-estimation", + "visualization" + ] }, { - "uid": "github/wdecoster/NanoPlot", - "url": "https://github.com/wdecoster/NanoPlot", - "rel": "/software/repository/github/wdecoster/NanoPlot", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Plotting scripts for long read sequencing data", - "topics": [] + "uid": "github/franciscovillaescusa/Pylians", + "url": "https://github.com/franciscovillaescusa/Pylians", + "rel": "/software/repository/github/franciscovillaescusa/Pylians", + "avatar": "https://avatars.githubusercontent.com/u/4404316?v=4", + "description": "Libraries to analyze numerical simulations", + "topics": [ + "simulation", + "nbody-simulation", + "power-spectrum", + "density-estimation", + "bispectrum", + "21cm", + "python", + "cython", + "c" + ] }, { - "uid": "github/wdecoster/nanoget", - "url": "https://github.com/wdecoster/nanoget", - "rel": "/software/repository/github/wdecoster/nanoget", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Functions to extract information from Oxford Nanopore sequencing data and alignments", + "uid": "github/gxiaolab/scAllele", + "url": "https://github.com/gxiaolab/scAllele", + "rel": "/software/repository/github/gxiaolab/scAllele", + "avatar": "https://avatars.githubusercontent.com/u/43121068?v=4", + "description": "scAllele is a versatile tool to detect and analyze nucleotide variants in scRNA-seq.", "topics": [] }, { - "uid": "github/wdecoster/chopper", - "url": "https://github.com/wdecoster/chopper", - "rel": "/software/repository/github/wdecoster/chopper", - "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", - "description": "Rust implementation of NanoFilt+NanoLyse, both originally written in Python. This tool, intended for long read sequencing such as PacBio or ONT, filters and trims a fastq file.", - "topics": [] + "uid": "github/moritzobenauer/ProjectRaccoon", + "url": "https://github.com/moritzobenauer/ProjectRaccoon", + "rel": "/software/repository/github/moritzobenauer/ProjectRaccoon", + "avatar": "https://avatars.githubusercontent.com/u/132915491?v=4", + "description": "Automated construction of atomistic and coarse-grained models in the PDB format for polymer peptide conjugates.", + "topics": [ + "molecular-dynamics-simulation", + "molecular-modeling", + "cheminformatics", + "pdb-files" + ] }, { - "uid": "github/Patrick-Cole/pygmi", - "url": "https://github.com/Patrick-Cole/pygmi", - "rel": "/software/repository/github/Patrick-Cole/pygmi", - "avatar": "https://avatars.githubusercontent.com/u/8198125?v=4", - "description": "PyGMI - Python Geophysical Modelling and Interpretation", + "uid": "github/seamplex/feenox", + "url": "https://github.com/seamplex/feenox", + "rel": "/software/repository/github/seamplex/feenox", + "avatar": "https://avatars.githubusercontent.com/u/47778967?v=4", + "description": "Cloud-first free no-fee no-X uniX-like finite-element(ish) computational engineering tool", "topics": [ - "geophysics", - "remote-sensing", - "seismology" + "finite-elements", + "hpc", + "numerical-methods", + "ode-solver", + "pde-solver" ] }, { - "uid": "github/scverse/scanpy", - "url": "https://github.com/scverse/scanpy", - "rel": "/software/repository/github/scverse/scanpy", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "Single-cell analysis in Python. Scales to >100M cells.", + "uid": "github/solislemuslab/minaa", + "url": "https://github.com/solislemuslab/minaa", + "rel": "/software/repository/github/solislemuslab/minaa", + "avatar": "https://avatars.githubusercontent.com/u/57375595?v=4", + "description": "MiNAA aligns a pair of networks based their topologies and biologies.", "topics": [ - "machine-learning", - "data-science", - "visualize-data", - "transcriptomics", - "bioinformatics", - "scanpy", - "anndata", - "python", - "scverse" + "graal", + "graph-algorithm", + "graphlets", + "interaction-network", + "microbiome", + "network-alignment", + "orca" ] }, { - "uid": "github/scverse/muon", - "url": "https://github.com/scverse/muon", - "rel": "/software/repository/github/scverse/muon", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "muon is a multimodal omics Python framework", - "topics": [ - "multimodal-data", - "multimodal-omics-analysis", - "multi-omics", - "anndata", - "scanpy", - "mudata", - "muon", - "scrna-seq", - "scatac-seq", - "cite-seq", - "scverse" - ] - }, - { - "uid": "github/scverse/anndata", - "url": "https://github.com/scverse/anndata", - "rel": "/software/repository/github/scverse/anndata", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "Annotated data.", - "topics": [ - "scanpy", - "data-science", - "transcriptomics", - "bioinformatics", - "machine-learning", - "scverse", - "anndata" - ] + "uid": "github/openmsr/CAD_to_OpenMC", + "url": "https://github.com/openmsr/CAD_to_OpenMC", + "rel": "/software/repository/github/openmsr/CAD_to_OpenMC", + "avatar": "https://avatars.githubusercontent.com/u/36203476?v=4", + "description": "code to target the conversion from a step-file to a h5m-geometry for neutronics ", + "topics": [] }, { - "uid": "github/EliseJ/astroABC", - "url": "https://github.com/EliseJ/astroABC", - "rel": "/software/repository/github/EliseJ/astroABC", - "avatar": "https://avatars.githubusercontent.com/u/4825088?v=4", - "description": "Approximate Bayesian Computation Sequential Monte Carlo sampler for parameter estimation.", + "uid": "github/hopr-framework/PyHOPE", + "url": "https://github.com/hopr-framework/PyHOPE", + "rel": "/software/repository/github/hopr-framework/PyHOPE", + "avatar": "https://avatars.githubusercontent.com/u/72623927?v=4", + "description": "Python High-Order Preprocessing Environment", "topics": [] }, { - "uid": "github/EliseJ/superabc", - "url": "https://github.com/EliseJ/superabc", - "rel": "/software/repository/github/EliseJ/superabc", - "avatar": "https://avatars.githubusercontent.com/u/4825088?v=4", - "description": "superABC: cosmological constraints from SN light curves using Approximate Bayesian Computation", + "uid": "github/lysovosyl/NanoDeep", + "url": "https://github.com/lysovosyl/NanoDeep", + "rel": "/software/repository/github/lysovosyl/NanoDeep", + "avatar": "https://avatars.githubusercontent.com/u/133856851?v=4", + "description": null, "topics": [] }, { - "uid": "github/legacysurvey/unwise_psf", - "url": "https://github.com/legacysurvey/unwise_psf", - "rel": "/software/repository/github/legacysurvey/unwise_psf", - "avatar": "https://avatars.githubusercontent.com/u/13069388?v=4", - "description": "per-coadd PSF for unWISE forced photometry", - "topics": [] + "uid": "github/arnikz/PIQMIe", + "url": "https://github.com/arnikz/PIQMIe", + "rel": "/software/repository/github/arnikz/PIQMIe", + "avatar": "https://avatars2.githubusercontent.com/u/7456848?v=4", + "description": "Proteomics Identifications & Quantitations Data Management & Integration Service", + "topics": [ + "proteomics", + "mass-spectrometry", + "bioinformatics-analysis", + "protein", + "identification", + "quantification", + "web-application" + ] }, { - "uid": "github/legacysurvey/legacypipe", - "url": "https://github.com/legacysurvey/legacypipe", - "rel": "/software/repository/github/legacysurvey/legacypipe", - "avatar": "https://avatars.githubusercontent.com/u/13069388?v=4", - "description": "Image reduction pipeline for the DESI Legacy Imaging Surveys, using the Tractor framework", + "uid": "github/viash-io/viash", + "url": "https://github.com/viash-io/viash", + "rel": "/software/repository/github/viash-io/viash", + "avatar": "https://avatars.githubusercontent.com/u/81986038?v=4", + "description": "script + metadata = standalone component", "topics": [] }, { - "uid": "github/basp-group/purify", - "url": "https://github.com/basp-group/purify", - "rel": "/software/repository/github/basp-group/purify", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Software for radio-interferometric imaging 1.0", - "topics": [] + "uid": "github/olivares-j/Kalkayotl", + "url": "https://github.com/olivares-j/Kalkayotl", + "rel": "/software/repository/github/olivares-j/Kalkayotl", + "avatar": "https://avatars.githubusercontent.com/u/7568214?v=4", + "description": "This repository contains a code to infer distances to stellar clusters and its stars from Gaia parallaxes.", + "topics": [ + "parallaxer", + "infer-distances" + ] }, { - "uid": "github/basp-group/Puri-Psi", - "url": "https://github.com/basp-group/Puri-Psi", - "rel": "/software/repository/github/basp-group/Puri-Psi", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Software platform for Scalable radio-interferometric imaging 2.0", - "topics": [] + "uid": "github/fulcrumgenomics/fgbio", + "url": "https://github.com/fulcrumgenomics/fgbio", + "rel": "/software/repository/github/fulcrumgenomics/fgbio", + "avatar": "https://avatars.githubusercontent.com/u/13546013?v=4", + "description": "Tools for working with genomic and high throughput sequencing data.", + "topics": [ + "analyzing-genomic-data", + "umi", + "bioinformatics", + "ngs", + "scala", + "fgbio", + "molecular-indexes" + ] }, { - "uid": "github/basp-group/R2D2-RI", - "url": "https://github.com/basp-group/R2D2-RI", - "rel": "/software/repository/github/basp-group/R2D2-RI", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Residual-to-Residual DNN Series for computational imaging with application to RI in astronomy", - "topics": [] + "uid": "github/openjournals/joss", + "url": "https://github.com/openjournals/joss", + "rel": "/software/repository/github/openjournals/joss", + "avatar": "https://avatars3.githubusercontent.com/u/9032431?v=4", + "description": "The Journal of Open Source Software", + "topics": [ + "journal", + "open-access", + "scientific-journals", + "scientific-software", + "publishing", + "academia", + "academic" + ] }, { - "uid": "github/basp-group/faceted-hypersara", - "url": "https://github.com/basp-group/Faceted-HyperSARA", - "rel": "/software/repository/github/basp-group/faceted-hypersara", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Faceted-HyperSARA", + "uid": "github/astroferreira/galclean", + "url": "https://github.com/astroferreira/galclean", + "rel": "/software/repository/github/astroferreira/galclean", + "avatar": "https://avatars.githubusercontent.com/u/14275979?v=4", + "description": "Simple tool to remove bright sources (excluding the galaxy itself) from a fits image using Astropy's PhotUtils", "topics": [] }, { - "uid": "github/basp-group/SARA-PPD", - "url": "https://github.com/basp-group/SARA-PPD", - "rel": "/software/repository/github/basp-group/SARA-PPD", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "SARA-PPD: Preconditioned primal-dual algorithm for radio-interferometric imaging", + "uid": "github/reality/klarigi", + "url": "https://github.com/reality/klarigi", + "rel": "/software/repository/github/reality/klarigi", + "avatar": "https://avatars.githubusercontent.com/u/223469?v=4", + "description": null, "topics": [] }, { - "uid": "github/basp-group/BUQO", - "url": "https://github.com/basp-group/BUQO", - "rel": "/software/repository/github/basp-group/BUQO", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "BUQO: Bayesian Uncertainty Quantification by Optimisation", - "topics": [] + "uid": "github/mp3guy/ElasticFusion", + "url": "https://github.com/mp3guy/ElasticFusion", + "rel": "/software/repository/github/mp3guy/ElasticFusion", + "avatar": "https://avatars.githubusercontent.com/u/3238631?v=4", + "description": "Real-time dense visual SLAM system", + "topics": [ + "slam", + "cuda", + "reconstruction" + ] }, { - "uid": "github/basp-group/AIRI", - "url": "https://github.com/basp-group/AIRI", - "rel": "/software/repository/github/basp-group/AIRI", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "\"AI for Regularisation in Imaging\" plug-and-play algorithms for computational imaging", + "uid": "github/brettc/partitionfinder", + "url": "https://github.com/brettc/partitionfinder", + "rel": "/software/repository/github/brettc/partitionfinder", + "avatar": "https://avatars.githubusercontent.com/u/457283?v=4", + "description": "PartitionFinder discovers optimal partitioning schemes for DNA sequences.", "topics": [] }, { - "uid": "github/basp-group/R2D2-SII", - "url": "https://github.com/basp-group/R2D2-SII", - "rel": "/software/repository/github/basp-group/R2D2-SII", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Residual-to-Residual DNN Series for computational imaging with application to SII in astronomy", + "uid": "github/NielsenBerkeleyLab/sconce", + "url": "https://github.com/NielsenBerkeleyLab/sconce", + "rel": "/software/repository/github/NielsenBerkeleyLab/sconce", + "avatar": "https://avatars.githubusercontent.com/u/33462730?v=4", + "description": null, "topics": [] }, { - "uid": "github/basp-group/sopt", - "url": "https://github.com/basp-group/sopt", - "rel": "/software/repository/github/basp-group/sopt", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "SOPT: Sparse OPTimisation.", + "uid": "github/NoahSailer/FishLSS", + "url": "https://github.com/NoahSailer/FishLSS", + "rel": "/software/repository/github/NoahSailer/FishLSS", + "avatar": "https://avatars.githubusercontent.com/u/57497859?v=4", + "description": "Fisher forecasting code for Large Scale Structure surveys using Lagrangian Perturbation Theory.", "topics": [] }, { - "uid": "github/basp-group/Optical-Interferometry-Trilinear", - "url": "https://github.com/basp-group/Optical-Interferometry-Trilinear", - "rel": "/software/repository/github/basp-group/Optical-Interferometry-Trilinear", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "Nonconvex optimisation approach to optical-interferometric imaging", + "uid": "github/bfarr/kombine", + "url": "https://github.com/bfarr/kombine", + "rel": "/software/repository/github/bfarr/kombine", + "avatar": "https://avatars.githubusercontent.com/u/2041208?v=4", + "description": "A kernel-density-based, embarrassingly parallel ensemble sampler", "topics": [] }, { - "uid": "github/basp-group/SARA-dimensionality-reduction", - "url": "https://github.com/basp-group/SARA-dimensionality-reduction", - "rel": "/software/repository/github/basp-group/SARA-dimensionality-reduction", - "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", - "description": "SARA-dimensionality-reduction: Fourier Dimensionality Reduction for radio-interferometric imaging with SARA", + "uid": "github/bfarr/exocartographer", + "url": "https://github.com/bfarr/exocartographer", + "rel": "/software/repository/github/bfarr/exocartographer", + "avatar": "https://avatars.githubusercontent.com/u/2041208?v=4", + "description": "A forward-modeling tool for constraining surface maps orbital parameters of exoplanets from time-resolved photometry", "topics": [] }, { - "uid": "github/sahasuparna/DeMoS", - "url": "https://github.com/sahasuparna/DeMoS", - "rel": "/software/repository/github/sahasuparna/DeMoS", - "avatar": "https://avatars.githubusercontent.com/u/32774833?v=4", - "description": null, + "uid": "github/gridap/GridapSolvers.jl", + "url": "https://github.com/gridap/GridapSolvers.jl", + "rel": "/software/repository/github/gridap/GridapSolvers.jl", + "avatar": "https://avatars.githubusercontent.com/u/49163828?v=4", + "description": "Solvers and preconditioners for the Gridap ecosystem.", "topics": [] }, { - "uid": "github/CLARIAH/grlc", - "url": "https://github.com/CLARIAH/grlc", - "rel": "/software/repository/github/CLARIAH/grlc", - "avatar": "https://avatars0.githubusercontent.com/u/15210767?v=4", - "description": "grlc builds Web APIs using shared SPARQL queries", + "uid": "github/gridap/Gridap.jl", + "url": "https://github.com/gridap/Gridap.jl", + "rel": "/software/repository/github/gridap/Gridap.jl", + "avatar": "https://avatars0.githubusercontent.com/u/49163828?v=4", + "description": "Grid-based approximation of partial differential equations in Julia", "topics": [ - "swagger-ui", - "sparql", - "linked-data", - "semantic-web", - "api", - "linked-data-api", - "open-api" + "julia", + "pdes", + "partial-differential-equations", + "finite-elements", + "numerical-methods", + "gridap" ] }, { - "uid": "github/Higgins00/TESS-Localize", - "url": "https://github.com/Higgins00/TESS-Localize", - "rel": "/software/repository/github/Higgins00/TESS-Localize", - "avatar": "https://avatars.githubusercontent.com/u/43622895?v=4", - "description": "Code for localizing variable star signatures in TESS Photometry", + "uid": "github/tbronzwaer/raptor", + "url": "https://github.com/tbronzwaer/raptor", + "rel": "/software/repository/github/tbronzwaer/raptor", + "avatar": "https://avatars.githubusercontent.com/u/8244822?v=4", + "description": "Public version of the RAPTOR code for radiative transfer in arbitrary spacetimes. See README file for instructions and contact details.", "topics": [] }, { - "uid": "github/peterspackman/occ", - "url": "https://github.com/peterspackman/occ", - "rel": "/software/repository/github/peterspackman/occ", - "avatar": "https://avatars.githubusercontent.com/u/7966525?v=4", - "description": "Open Computational Chemistry in C++", - "topics": [ - "chemistry", - "library", - "quantum-chemistry", - "cpp17" - ] + "uid": "github/CosmoLike/CosmoCov", + "url": "https://github.com/CosmoLike/CosmoCov", + "rel": "/software/repository/github/CosmoLike/CosmoCov", + "avatar": "https://avatars.githubusercontent.com/u/24500384?v=4", + "description": "Configuration Space Covariances for Projected Galaxy 2-Point Statistics", + "topics": [] }, { - "uid": "github/LLNL/popclass", - "url": "https://github.com/LLNL/popclass", - "rel": "/software/repository/github/LLNL/popclass", - "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", - "description": "A python package that allows flexible, probabilistic classification of a microlensing event", + "uid": "github/tortellini-tools/action", + "url": "https://github.com/tortellini-tools/action", + "rel": "/software/repository/github/tortellini-tools/action", + "avatar": "https://avatars.githubusercontent.com/u/84508231?v=4", + "description": "GH action to check dependency licence issues using ort", "topics": [] }, { - "uid": "github/LLNL/SSAPy", - "url": "https://github.com/LLNL/SSAPy", - "rel": "/software/repository/github/LLNL/SSAPy", - "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", - "description": "A Python package allowing for fast and precise orbital modeling.", - "topics": [ - "application", - "python" - ] + "uid": "github/OPM/opm-simulators", + "url": "https://github.com/OPM/opm-simulators", + "rel": "/software/repository/github/OPM/opm-simulators", + "avatar": "https://avatars.githubusercontent.com/u/1827197?v=4", + "description": "OPM Flow and experimental simulators, including components such as well models etc.", + "topics": [] }, { - "uid": "github/LLNL/echemfem", - "url": "https://github.com/LLNL/echemfem", - "rel": "/software/repository/github/LLNL/echemfem", - "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", - "description": "Finite Element Method for Electrochemical Transport (EchemFEM)", + "uid": "github/OPM/pyopmspe11", + "url": "https://github.com/OPM/pyopmspe11", + "rel": "/software/repository/github/OPM/pyopmspe11", + "avatar": "https://avatars.githubusercontent.com/u/1827197?v=4", + "description": "A Python framework using OPM Flow for the SPE11 benchmark project", "topics": [ - "discontinuous-galerkin", - "electrochemistry", - "finite-element-method", - "firedrake", - "python" + "co2", + "csp11", + "flow", + "opm", + "spe11" ] }, { - "uid": "github/cholla-hydro/cholla", - "url": "https://github.com/cholla-hydro/cholla", - "rel": "/software/repository/github/cholla-hydro/cholla", - "avatar": "https://avatars.githubusercontent.com/u/18468918?v=4", - "description": "A GPU-based hydro code", + "uid": "github/statOmics/tradeSeqPaper", + "url": "https://github.com/statOmics/tradeSeqPaper", + "rel": "/software/repository/github/statOmics/tradeSeqPaper", + "avatar": "https://avatars0.githubusercontent.com/u/24431387?v=4", + "description": "Scripts to reproduce analyses of tradeSeq paper.", "topics": [] }, { - "uid": "github/joergbuchwald/joss_ogs6py_VTUinterface", - "url": "https://github.com/joergbuchwald/joss_ogs6py_VTUinterface", - "rel": "/software/repository/github/joergbuchwald/joss_ogs6py_VTUinterface", - "avatar": "https://avatars.githubusercontent.com/u/44933043?v=4", - "description": null, + "uid": "github/statOmics/satuRnPaper", + "url": "https://github.com/statOmics/satuRnPaper", + "rel": "/software/repository/github/statOmics/satuRnPaper", + "avatar": "https://avatars.githubusercontent.com/u/24431387?v=4", + "description": "Github repository associated with the publication of *satuRn: Scalable Analysis of Differential Transcript Usage for Bulk and Single-cell RNA-sequencing Applications*", "topics": [] }, { - "uid": "github/debian-tex/texlive-nonbin", - "url": "https://github.com/debian-tex/texlive-nonbin", - "rel": "/software/repository/github/debian-tex/texlive-nonbin", - "avatar": "https://avatars.githubusercontent.com/u/46477164?v=4", - "description": "debian non-bin texlive pkgs", + "uid": "github/mmann1123/xr_fresh", + "url": "https://github.com/mmann1123/xr_fresh", + "rel": "/software/repository/github/mmann1123/xr_fresh", + "avatar": "https://avatars.githubusercontent.com/u/5185364?v=4", + "description": "A faster way to raster times-series feature utopia", "topics": [] }, { - "uid": "github/debian-tex/biber", - "url": "https://github.com/debian-tex/biber", - "rel": "/software/repository/github/debian-tex/biber", - "avatar": "https://avatars.githubusercontent.com/u/46477164?v=4", - "description": "Much-augmented BibTeX replacement for BibLaTeX users", + "uid": "github/epigenelabs/inmoose", + "url": "https://github.com/epigenelabs/inmoose", + "rel": "/software/repository/github/epigenelabs/inmoose", + "avatar": "https://avatars.githubusercontent.com/u/43795319?v=4", + "description": "InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.", "topics": [] }, { - "uid": "github/Alymantara/pydoppler", - "url": "https://github.com/Alymantara/pydoppler", - "rel": "/software/repository/github/Alymantara/pydoppler", - "avatar": "https://avatars.githubusercontent.com/u/5550434?v=4", - "description": "A python wrapper for Henk Spruit's doppler tomography software", + "uid": "github/SimCab-CHU/ifCNVR", + "url": "https://github.com/SimCab-CHU/ifCNV-R", + "rel": "/software/repository/github/SimCab-CHU/ifCNVR", + "avatar": "https://avatars.githubusercontent.com/u/70569769?v=4", + "description": "ifCNV R package", "topics": [] }, { - "uid": "github/MOSAICS-NIH/MOSAICS", - "url": "https://github.com/MOSAICS-NIH/MOSAICS", - "rel": "/software/repository/github/MOSAICS-NIH/MOSAICS", - "avatar": "https://avatars.githubusercontent.com/u/113941588?v=4", - "description": "A collection of tools for characterizing membrane structure and dynamics within simulated trajectories of molecular systems.", + "uid": "github/ggonnella/gfapy", + "url": "https://github.com/ggonnella/gfapy", + "rel": "/software/repository/github/ggonnella/gfapy", + "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", + "description": "Gfapy: a flexible and extensible software library for handling sequence graphs in Python", "topics": [ - "biophysics", - "dynamics", - "grid", - "lattice", - "lipids", - "membrane", - "mosaics", - "simulations", - "structure", - "nih" + "bioinformatics", + "gfa", + "graphs", + "sequence-analysis", + "assembly" ] }, { - "uid": "github/hendr1km/dropout", - "url": "https://github.com/hendr1km/dropout", - "rel": "/software/repository/github/hendr1km/dropout", - "avatar": "https://avatars.githubusercontent.com/u/124534996?v=4", - "description": "tools for dropout analysis when working with survey data", - "topics": [] - }, - { - "uid": "github/coolneighbors/unwise-verse", - "url": "https://github.com/coolneighbors/unWISE-verse", - "rel": "/software/repository/github/coolneighbors/unwise-verse", - "avatar": "https://avatars.githubusercontent.com/u/90220036?v=4", - "description": "Integrated flipbook / panoptes pipeline", - "topics": [] - }, - { - "uid": "github/mj-will/nessai", - "url": "https://github.com/mj-will/nessai", - "rel": "/software/repository/github/mj-will/nessai", - "avatar": "https://avatars.githubusercontent.com/u/25609742?v=4", - "description": "nessai: Nested Sampling with Artificial Intelligence", + "uid": "github/ggonnella/fastsubtrees", + "url": "https://github.com/ggonnella/fastsubtrees", + "rel": "/software/repository/github/ggonnella/fastsubtrees", + "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", + "description": "Python library and command line script , for fast extraction of subtrees of fairly large trees, consisting of millions of nodes, such as the NCBI taxonomy tree.", "topics": [ - "pytorch", - "normalizing-flows", - "nested-sampling", + "bioinformatics", + "ncbi-taxonomy", "python", - "bayesian-inference", - "bilby", - "machine-learning" + "subtree", + "taxonomy", + "tree", + "subtree-extraction", + "subtree-query" ] }, { - "uid": "github/ruta-k/uGMRT-pipeline", - "url": "https://github.com/ruta-k/uGMRT-pipeline", - "rel": "/software/repository/github/ruta-k/uGMRT-pipeline", - "avatar": "https://avatars.githubusercontent.com/u/38125415?v=4", - "description": null, + "uid": "github/ggonnella/rgfa", + "url": "https://github.com/ggonnella/rgfa", + "rel": "/software/repository/github/ggonnella/rgfa", + "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", + "description": "Ruby library for handling GFA files", "topics": [] }, { - "uid": "github/mateidavid/nanocall", - "url": "https://github.com/mateidavid/nanocall", - "rel": "/software/repository/github/mateidavid/nanocall", - "avatar": "https://avatars.githubusercontent.com/u/1039002?v=4", - "description": "An Oxford Nanopore Basecaller", + "uid": "github/sapearson/HSS", + "url": "https://github.com/sapearson/HSS", + "rel": "/software/repository/github/sapearson/HSS", + "avatar": "https://avatars.githubusercontent.com/u/6550771?v=4", + "description": "The Hough Stream Spotter (HSS)", "topics": [] }, { - "uid": "github/mateidavid/fast5", - "url": "https://github.com/mateidavid/fast5", - "rel": "/software/repository/github/mateidavid/fast5", - "avatar": "https://avatars.githubusercontent.com/u/1039002?v=4", - "description": "A C++ header-only library for reading Oxford Nanopore Fast5 files", + "uid": "github/hposborn/MonoTools", + "url": "https://github.com/hposborn/MonoTools", + "rel": "/software/repository/github/hposborn/MonoTools", + "avatar": "https://avatars.githubusercontent.com/u/13677414?v=4", + "description": "A package for detecting, vetting, and modelling transiting exoplanets on uncertain periods", + "topics": [ + "transits", + "lightcurve", + "planets", + "exoplanet", + "duo-transits" + ] + }, + { + "uid": "github/Baohua-Chen/GFFx", + "url": "https://github.com/Baohua-Chen/GFFx", + "rel": "/software/repository/github/Baohua-Chen/GFFx", + "avatar": "https://avatars.githubusercontent.com/u/52615906?v=4", + "description": "A Rust-Based suite of utilities for ultra-fast genomic feature extraction", "topics": [] }, { - "uid": "github/dazhwu/pydynpd", - "url": "https://github.com/dazhwu/pydynpd", - "rel": "/software/repository/github/dazhwu/pydynpd", - "avatar": "https://avatars.githubusercontent.com/u/63244649?v=4", - "description": "This python package estimates dynamic panel data model using difference GMM and system GMM.", + "uid": "github/lh3/bfc", + "url": "https://github.com/lh3/bfc", + "rel": "/software/repository/github/lh3/bfc", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "High-performance error correction for Illumina resequencing data", "topics": [ - "arellano-bond", - "dynamic-panel-data", - "system-gmm", - "dynamic", - "panel", - "data" + "bioinformatics", + "genomics" ] }, { - "uid": "github/deepskies/DeepBench", - "url": "https://github.com/deepskies/DeepBench", - "rel": "/software/repository/github/deepskies/DeepBench", - "avatar": "https://avatars.githubusercontent.com/u/30120253?v=4", - "description": "Simulation library for very simple simulations to benchmark machine learning algorithms", + "uid": "github/lh3/bgt", + "url": "https://github.com/lh3/bgt", + "rel": "/software/repository/github/lh3/bgt", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "Flexible genotype query among 30,000+ samples whole-genome", "topics": [ - "benchmark", - "simulation" + "bioinformatics", + "genomics" ] }, { - "uid": "github/deepskies/deeplenstronomy", - "url": "https://github.com/deepskies/deeplenstronomy", - "rel": "/software/repository/github/deepskies/deeplenstronomy", - "avatar": "https://avatars.githubusercontent.com/u/30120253?v=4", - "description": "A pipeline for versatile strong lens sample simulations", - "topics": [] - }, - { - "uid": "github/sevenstarknight/VariableStarAnalysis", - "url": "https://github.com/sevenstarknight/VariableStarAnalysis", - "rel": "/software/repository/github/sevenstarknight/VariableStarAnalysis", - "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", - "description": null, + "uid": "github/lh3/wgsim", + "url": "https://github.com/lh3/wgsim", + "rel": "/software/repository/github/lh3/wgsim", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "Reads simulator", "topics": [ - "machine-learning", - "astrophysics", - "photometric", - "analysis", - "time-series-analysis", - "metric-learning" + "bioinformatics", + "genomics" ] }, { - "uid": "github/sevenstarknight/OCDetector", - "url": "https://github.com/sevenstarknight/OCDetector", - "rel": "/software/repository/github/sevenstarknight/OCDetector", - "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", - "description": "O'Connell Effect Detector using Push-Pull Learning", + "uid": "github/lh3/fermi-lite", + "url": "https://github.com/lh3/fermi-lite", + "rel": "/software/repository/github/lh3/fermi-lite", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "Standalone C library for assembling Illumina short reads in small regions", "topics": [ - "machine", - "astronomy", - "astrostatistics", - "astroinformatics" + "bioinformatics", + "genomics", + "denovo-assembly" ] }, { - "uid": "github/sevenstarknight/SSMM", - "url": "https://github.com/sevenstarknight/SSMM", - "rel": "/software/repository/github/sevenstarknight/SSMM", - "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", - "description": "Variable Star Signature Classification using Slotted Symbolic Markov Modeling", + "uid": "github/lh3/bedtk", + "url": "https://github.com/lh3/bedtk", + "rel": "/software/repository/github/lh3/bedtk", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)", "topics": [ - "machine-learning", - "astronomy", - "astroinformatics", - "astrostatistics" + "bioinformatics" ] }, { - "uid": "github/sevenstarknight/LINEARSupervisedClassification", - "url": "https://github.com/sevenstarknight/LINEARSupervisedClassification", - "rel": "/software/repository/github/sevenstarknight/LINEARSupervisedClassification", - "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", - "description": "The initial analysis of LINEAR data using supervised classification methods.", + "uid": "github/lh3/miniasm", + "url": "https://github.com/lh3/miniasm", + "rel": "/software/repository/github/lh3/miniasm", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "Ultrafast de novo assembly for long noisy reads (though having no consensus step)", "topics": [ - "supervised-classification-methods", - "machine", - "machine-learning", - "astroinformatics", - "astrostatistics" + "bioinformatics", + "genomics", + "denovo-assembly" ] }, { - "uid": "github/AlmaasLab/csdR", - "url": "https://github.com/AlmaasLab/csdR", - "rel": "/software/repository/github/AlmaasLab/csdR", - "avatar": "https://avatars.githubusercontent.com/u/62121167?v=4", - "description": "Efficient CSD implementation in R", - "topics": [] - }, - { - "uid": "github/JuliaHEP/UnROOT.jl", - "url": "https://github.com/JuliaHEP/UnROOT.jl", - "rel": "/software/repository/github/JuliaHEP/UnROOT.jl", - "avatar": "https://avatars.githubusercontent.com/u/20717981?v=4", - "description": "Native Julia I/O package to work with CERN ROOT files", + "uid": "github/lh3/minimap2", + "url": "https://github.com/lh3/minimap2", + "rel": "/software/repository/github/lh3/minimap2", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "A versatile pairwise aligner for genomic and spliced nucleotide sequences", "topics": [ - "cern-root", - "julia", - "analysis", - "bigdata", - "particle-physics", - "hep", - "hep-ex", - "high-energy-physics", - "hacktoberfest" + "bioinformatics", + "sequence-alignment", + "spliced-alignment", + "genomics" ] }, { - "uid": "github/minaskar/zeus", - "url": "https://github.com/minaskar/zeus", - "rel": "/software/repository/github/minaskar/zeus", - "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", - "description": "\u26a1\ufe0f zeus: Lightning Fast MCMC \u26a1\ufe0f", + "uid": "github/lh3/bioawk", + "url": "https://github.com/lh3/bioawk", + "rel": "/software/repository/github/lh3/bioawk", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "BWK awk modified for biological data", "topics": [ - "mcmc", - "mcmc-sampler", - "bayesian-inference", - "inference", - "machine-learning", - "sampling", - "sampling-methods", - "general-purpose", - "black-box-bayesian-inference", - "probabilistic-data-analysis", - "python" + "bioinformatics", + "sequence-analysis" ] }, { - "uid": "github/minaskar/pocomc", - "url": "https://github.com/minaskar/pocomc", - "rel": "/software/repository/github/minaskar/pocomc", - "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", - "description": "pocoMC: A Python implementation of Preconditioned Monte Carlo for accelerated Bayesian Computation", + "uid": "github/lh3/seqtk", + "url": "https://github.com/lh3/seqtk", + "rel": "/software/repository/github/lh3/seqtk", + "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", + "description": "Toolkit for processing sequences in FASTA/Q formats", "topics": [ - "astronomy", - "astrophysics", - "bayesian-inference", - "black-box-bayesian-inference", - "cosmology", - "cosmology-inference", - "general-purpose", - "inference", - "machine-learning", - "mcmc", - "mcmc-sampler", - "normalizing-flows", - "probabilistic-data-analysis", - "python", - "sampling", - "sampling-methods", - "smc" + "bioinformatics", + "sequence-analysis" ] }, { - "uid": "github/minaskar/hankl", - "url": "https://github.com/minaskar/hankl", - "rel": "/software/repository/github/minaskar/hankl", - "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", - "description": "hankl is a lightweight Python implementation of the FFTLog algorithm for Cosmology", + "uid": "github/SwissClinicalTrialOrganisation/secuTrialR", + "url": "https://github.com/SwissClinicalTrialOrganisation/secuTrialR", + "rel": "/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", + "avatar": "https://avatars3.githubusercontent.com/u/44496957?v=4", + "description": "Handling of data from the clinical data management system secuTrial", + "topics": [] + }, + { + "uid": "github/csdms/bmi", + "url": "https://github.com/csdms/bmi", + "rel": "/software/repository/github/csdms/bmi", + "avatar": "https://avatars3.githubusercontent.com/u/6618239?v=4", + "description": "The Basic Model Interface", "topics": [ - "hankel", - "fftlog", - "fft", - "cosmology", - "numerical-integration" + "bmi", + "csdms", + "geosciences", + "c", + "fortran", + "python", + "cxx" ] }, { - "uid": "github/annayqho/TheCannon", - "url": "https://github.com/annayqho/TheCannon", - "rel": "/software/repository/github/annayqho/TheCannon", - "avatar": "https://avatars.githubusercontent.com/u/8926184?v=4", - "description": "a data-driven method for determining stellar parameters and abundances from stellar spectra", + "uid": "github/DeepRank/iScore", + "url": "https://github.com/DeepRank/iScore", + "rel": "/software/repository/github/DeepRank/iScore", + "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", + "description": "iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines", "topics": [] }, { - "uid": "github/jonbmartin/pulpy", - "url": "https://github.com/jonbmartin/pulpy", - "rel": "/software/repository/github/jonbmartin/pulpy", - "avatar": "https://avatars.githubusercontent.com/u/44706383?v=4", - "description": "Pulses in Python", + "uid": "github/DeepRank/pssmgen", + "url": "https://github.com/DeepRank/PSSMGen", + "rel": "/software/repository/github/DeepRank/pssmgen", + "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", + "description": "Generates consistent PSSM and/or PDB files for protein-protein complexes", "topics": [] }, { - "uid": "github/gdalle/HiddenMarkovModels.jl", - "url": "https://github.com/gdalle/HiddenMarkovModels.jl", - "rel": "/software/repository/github/gdalle/HiddenMarkovModels.jl", - "avatar": "https://avatars.githubusercontent.com/u/22795598?v=4", - "description": "A Julia package for simulation, inference and learning of Hidden Markov Models.", - "topics": [ - "julia", - "hidden-markov-model", - "hmm", - "statistics", - "baum-welch", - "forward-backward", - "viterbi", - "markov" - ] - }, - { - "uid": "github/SarveshVGharat/Plages-Identification", - "url": "https://github.com/SarveshVGharat/Plages-Identification", - "rel": "/software/repository/github/SarveshVGharat/Plages-Identification", - "avatar": "https://avatars.githubusercontent.com/u/89913681?v=4", - "description": null, + "uid": "github/DeepRank/pdb2sql", + "url": "https://github.com/DeepRank/pdb2sql", + "rel": "/software/repository/github/DeepRank/pdb2sql", + "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", + "description": "Fast and versatile biomolecular structure PDB file parser using SQL queries", "topics": [] }, { - "uid": "github/auranic/ClinTrajan", - "url": "https://github.com/auranic/ClinTrajan", - "rel": "/software/repository/github/auranic/ClinTrajan", - "avatar": "https://avatars0.githubusercontent.com/u/15074578?v=4", - "description": "Finding trajectories, bifurcations and quantifying pseudotime in large clinical datasets", + "uid": "github/DeepRank/deeprank-core", + "url": "https://github.com/DeepRank/deeprank-core", + "rel": "/software/repository/github/DeepRank/deeprank-core", + "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", + "description": null, "topics": [] }, { - "uid": "github/patrickfuchs/buildH", - "url": "https://github.com/patrickfuchs/buildH", - "rel": "/software/repository/github/patrickfuchs/buildH", - "avatar": "https://avatars.githubusercontent.com/u/13885052?v=4", - "description": ":computer: Build hydrogen atoms from united-atom molecular dynamics of lipids and calculate the order parameters.", + "uid": "github/DeepRank/DeepRank-GNN", + "url": "https://github.com/DeepRank/Deeprank-GNN", + "rel": "/software/repository/github/DeepRank/DeepRank-GNN", + "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", + "description": "Graph Network for protein-protein interface", "topics": [ - "python", - "lipids", - "order-parameters", - "united-atom", - "molecular-dynamics-simulation" + "graph", + "protein" ] }, { - "uid": "github/marius311/cosmoslik", - "url": "https://github.com/marius311/cosmoslik", - "rel": "/software/repository/github/marius311/cosmoslik", - "avatar": "https://avatars.githubusercontent.com/u/1510968?v=4", - "description": "Cosmology Sampler of LIKelihoods", + "uid": "github/DeepRank/deeprank", + "url": "https://github.com/DeepRank/deeprank", + "rel": "/software/repository/github/DeepRank/deeprank", + "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", + "description": "Deep learning framework for data mining protein-protein interactions using CNN", "topics": [ - "cosmology", - "mcmc", - "likelihood" + "3d-cnn", + "protein-protein-interaction", + "docking", + "pytorch" ] }, { - "uid": "github/marius311/pypico", - "url": "https://github.com/marius311/pypico", - "rel": "/software/repository/github/marius311/pypico", - "avatar": "https://avatars.githubusercontent.com/u/1510968?v=4", - "description": "Quickly compute the CMB powerspectra and matter transfer functions.", + "uid": "github/vmplacco/linemake", + "url": "https://github.com/vmplacco/linemake", + "rel": "/software/repository/github/vmplacco/linemake", + "avatar": "https://avatars.githubusercontent.com/u/13039187?v=4", + "description": "linelist generator", "topics": [] }, { - "uid": "github/mdshw5/pyfaidx", - "url": "https://github.com/mdshw5/pyfaidx", - "rel": "/software/repository/github/mdshw5/pyfaidx", - "avatar": "https://avatars.githubusercontent.com/u/819554?v=4", - "description": "Efficient pythonic random access to fasta subsequences", + "uid": "github/yupidevs/pactus", + "url": "https://github.com/yupidevs/pactus", + "rel": "/software/repository/github/yupidevs/pactus", + "avatar": "https://avatars.githubusercontent.com/u/79972700?v=4", + "description": "Framework to evaluate Trajectory Classification Algorithms", "topics": [ - "python", - "bioinformatics", - "fasta", - "indexing", - "dna", - "protein", - "genomics", - "bgzf", - "samtools" + "classification", + "classification-models", + "evaluation-framework", + "trajectory", + "trajectory-analysis", + "transformers", + "python" ] }, { - "uid": "github/horovod/horovod", - "url": "https://github.com/horovod/horovod", - "rel": "/software/repository/github/horovod/horovod", - "avatar": "https://avatars.githubusercontent.com/u/46361271?v=4", - "description": "Distributed training framework for TensorFlow, Keras, PyTorch, and Apache MXNet.", - "topics": [ - "tensorflow", - "uber", - "machine-learning", - "machinelearning", - "mpi", - "baidu", - "deep-learning", - "deeplearning", - "keras", - "pytorch", - "mxnet", - "spark", - "ray" - ] + "uid": "github/GRTLCollaboration/GRFolres", + "url": "https://github.com/GRTLCollaboration/GRFolres", + "rel": "/software/repository/github/GRTLCollaboration/GRFolres", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "Extension to GRChombo for Modified Gravity simulations", + "topics": [] }, { - "uid": "github/justinmathias/isocalcR", - "url": "https://github.com/justinmathias/isocalcR", - "rel": "/software/repository/github/justinmathias/isocalcR", - "avatar": "https://avatars.githubusercontent.com/u/52084610?v=4", - "description": "R Package containing widely used isotope theory functions", + "uid": "github/GRTLCollaboration/GRTresna", + "url": "https://github.com/GRTLCollaboration/GRTresna", + "rel": "/software/repository/github/GRTLCollaboration/GRTresna", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "A code for solving the initial data constraints in General Relativity", "topics": [] }, { - "uid": "github/dipangwvu/SPEGID", - "url": "https://github.com/dipangwvu/SPEGID", - "rel": "/software/repository/github/dipangwvu/SPEGID", - "avatar": "https://avatars.githubusercontent.com/u/22922797?v=4", - "description": "Single-pulse Search Approach", + "uid": "github/GRTLCollaboration/GRChombo", + "url": "https://github.com/GRTLCollaboration/GRChombo", + "rel": "/software/repository/github/GRTLCollaboration/GRChombo", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "An AMR based open-source code for numerical relativity simulations.", "topics": [] }, { - "uid": "github/ylab-hi/ScanITD", - "url": "https://github.com/ylab-hi/ScanITD", - "rel": "/software/repository/github/ylab-hi/ScanITD", - "avatar": "https://avatars0.githubusercontent.com/u/44730433?v=4", - "description": null, + "uid": "github/GRTLCollaboration/GRDzhadzha", + "url": "https://github.com/GRTLCollaboration/GRDzhadzha", + "rel": "/software/repository/github/GRTLCollaboration/GRDzhadzha", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "A code to evolve matter on curved spacetimes with an analytic time and space dependence, e.g. black holes", "topics": [] }, { - "uid": "github/ylab-hi/ScanExitronLR", - "url": "https://github.com/ylab-hi/ScanExitronLR", - "rel": "/software/repository/github/ylab-hi/ScanExitronLR", - "avatar": "https://avatars.githubusercontent.com/u/44730433?v=4", - "description": "A package for the characterization and quantification of exitron splicing events in long-read RNA-seq", + "uid": "github/watts-dev/watts", + "url": "https://github.com/watts-dev/watts", + "rel": "/software/repository/github/watts-dev/watts", + "avatar": "https://avatars.githubusercontent.com/u/97905312?v=4", + "description": "Workflow and Template Toolkit for Simulation (WATTS)", "topics": [ "python", - "bioinformatics-tool", - "long-read-data" + "simulation", + "templates", + "nuclear-energy" ] }, { - "uid": "github/sntioudis/papreca", - "url": "https://github.com/sntioudis/papreca", - "rel": "/software/repository/github/sntioudis/papreca", - "avatar": "https://avatars.githubusercontent.com/u/42137665?v=4", - "description": "PAPRECA hybrid off-lattice kinetic Monte Carlo/molecular dynamics (kMC/MD) simulator", + "uid": "github/natelust/least_asymmetry", + "url": "https://github.com/natelust/least_asymmetry", + "rel": "/software/repository/github/natelust/least_asymmetry", + "avatar": "https://avatars.githubusercontent.com/u/6371766?v=4", + "description": "This code is to find the center of a distribution of light in an image using the least asymmetry method. The code also contains center of light and fitting a Gaussian routines as well. All functions are designed to take optional weights", "topics": [] }, { - "uid": "github/lydialucchesi/Vizumap", - "url": "https://github.com/lydialucchesi/Vizumap", - "rel": "/software/repository/github/lydialucchesi/Vizumap", - "avatar": "https://avatars.githubusercontent.com/u/20309551?v=4", - "description": "R package for visualizing uncertainty in spatial data", + "uid": "github/petigura/terra", + "url": "https://github.com/petigura/terra", + "rel": "/software/repository/github/petigura/terra", + "avatar": "https://avatars.githubusercontent.com/u/694371?v=4", + "description": "Transit Detection Code", "topics": [] }, { - "uid": "github/lukapecnik/NiaAML", - "url": "https://github.com/lukapecnik/NiaAML", - "rel": "/software/repository/github/lukapecnik/NiaAML", - "avatar": "https://avatars.githubusercontent.com/u/23029992?v=4", - "description": "Python automated machine learning framework.", + "uid": "github/newcleo-dev-team/lbh15", + "url": "https://github.com/newcleo-dev-team/lbh15", + "rel": "/software/repository/github/newcleo-dev-team/lbh15", + "avatar": "https://avatars.githubusercontent.com/u/113201176?v=4", + "description": "Compilation of thermo-physical properties for lead/bismuth-based liquid metals for fast reactor technology", "topics": [ - "machine-learning", - "automl", - "nature-inspired-algorithms", - "python", - "framework", - "classification", - "classification-pipelines" + "liquid-metal", + "nuclear-reactor", + "thermodynamic-properties" ] }, { - "uid": "github/rvandewater/ReciPies", - "url": "https://github.com/rvandewater/ReciPies", - "rel": "/software/repository/github/rvandewater/ReciPies", - "avatar": "https://avatars.githubusercontent.com/u/23501069?v=4", - "description": "\ud83e\udd67 Easily define reproducible preprocessing steps for ML on Polars and Pandas DataFrames. ", - "topics": [ - "tidymodels", - "data-science", - "pandas", - "python", - "scikit-learn", - "polars", - "machine-learning" - ] + "uid": "github/rqtl/qtl2", + "url": "https://github.com/rqtl/qtl2", + "rel": "/software/repository/github/rqtl/qtl2", + "avatar": "https://avatars.githubusercontent.com/u/9142954?v=4", + "description": "QTL analysis software for high-dimensional data and complex cross designs", + "topics": [] }, { - "uid": "github/flemingtonlab/SpliceV", - "url": "https://github.com/flemingtonlab/SpliceV", - "rel": "/software/repository/github/flemingtonlab/SpliceV", - "avatar": "https://avatars.githubusercontent.com/u/12562213?v=4", - "description": "Visualize coverage, canonical, and backsplice junctions.", + "uid": "github/paulhjkelly/taskgraph-metaprogramming", + "url": "https://github.com/paulhjkelly/taskgraph-metaprogramming", + "rel": "/software/repository/github/paulhjkelly/taskgraph-metaprogramming", + "avatar": "https://avatars.githubusercontent.com/u/2254492?v=4", + "description": "The TaskGraph Meta-programming Library is a C++ package that supports run-time code generation - programs that generate code on the fly, then execute it. And having built a piece of code, you can apply various transformations to it (such as loop interchange and tiling).", "topics": [] }, { - "uid": "github/rhpvorderman/sequali", - "url": "https://github.com/rhpvorderman/sequali", - "rel": "/software/repository/github/rhpvorderman/sequali", - "avatar": "https://avatars.githubusercontent.com/u/26142226?v=4", - "description": "Fast sequencing data quality metrics", + "uid": "github/neurogeriatricskiel/NGMT", + "url": "https://github.com/neurogeriatricskiel/KielMAT", + "rel": "/software/repository/github/neurogeriatricskiel/NGMT", + "avatar": "https://avatars.githubusercontent.com/u/63721960?v=4", + "description": "Python based toolbox for processing motion data", + "topics": [] + }, + { + "uid": "github/russelllab/wesa", + "url": "https://github.com/russelllab/wesa", + "rel": "/software/repository/github/russelllab/wesa", + "avatar": "https://avatars.githubusercontent.com/u/44021207?v=4", + "description": "WeSA (Weighted SocioAffinity): a tool for improving affinity proteomics data.", "topics": [ - "bam", - "fastq", - "illumina", - "nanopore", - "qc", - "quality-control" + "flask-application", + "protein-protein-interaction", + "proteomics-data-analysis", + "visualization" ] }, { - "uid": "github/keflavich/HiGal_SEDfitter", - "url": "https://github.com/keflavich/HiGal_SEDfitter", - "rel": "/software/repository/github/keflavich/HiGal_SEDfitter", - "avatar": "https://avatars.githubusercontent.com/u/143715?v=4", - "description": "SED fitting tools for Herschel Hi-Gal data", + "uid": "github/nilearn/nilearnhub.io", + "url": null, + "rel": "/software/repository/github/nilearn/nilearnhub.io", + "avatar": "", + "description": "a Python module for fast and easy statistical learning on NeuroImaging data.\r\rIt leverages the scikit-learn Python toolbox for multivariate statistics with applications such as predictive modelling, classification, decoding, or connectivity analysis.", "topics": [] }, { - "uid": "github/gogrean/PyXel", - "url": "https://github.com/gogrean/PyXel", - "rel": "/software/repository/github/gogrean/PyXel", - "avatar": "https://avatars.githubusercontent.com/u/6616486?v=4", - "description": "Package for modeling X-ray surface brightness profiles.", + "uid": "github/miracum/ahd2fhir", + "url": "https://github.com/miracum/ahd2fhir", + "rel": "/software/repository/github/miracum/ahd2fhir", + "avatar": "https://avatars.githubusercontent.com/u/25475545?v=4", + "description": "A REST service for mapping text analysis results from Averbis Health Discovery to FHIR resources.", "topics": [] }, { - "uid": "github/zdelrosario/py_grama", - "url": "https://github.com/zdelrosario/py_grama", - "rel": "/software/repository/github/zdelrosario/py_grama", - "avatar": "https://avatars0.githubusercontent.com/u/6273681?v=4", - "description": "Implementation of a grammar of model analysis", + "uid": "github/ppmim/PAPI4K", + "url": "https://github.com/ppmim/PAPI4K", + "rel": "/software/repository/github/ppmim/PAPI4K", + "avatar": "https://avatars.githubusercontent.com/u/44784?v=4", + "description": "PANIC data reduction pipeline", "topics": [ - "uq" + "data", + "infra-red", + "processing", + "python" ] }, { - "uid": "github/FourierFlows/GeophysicalFlows.jl", - "url": "https://github.com/FourierFlows/GeophysicalFlows.jl", - "rel": "/software/repository/github/FourierFlows/GeophysicalFlows.jl", - "avatar": "https://avatars.githubusercontent.com/u/35040959?v=4", - "description": "Geophysical fluid dynamics pseudospectral solvers with Julia and FourierFlows.jl.", - "topics": [ - "qg", - "quasigeostrophy", - "pdes", - "sqg", - "baroclinic", - "geophysical-fluid-dynamics", - "fourierflows", - "navier-stokes" - ] + "uid": "github/drcandacemakedamoore/cleanX", + "url": "https://github.com/drcandacemakedamoore/cleanX", + "rel": "/software/repository/github/drcandacemakedamoore/cleanX", + "avatar": "https://avatars.githubusercontent.com/u/31033601?v=4", + "description": "Python library for exploring, cleaning, normalizing, and augmenting large datasets of radiological data.", + "topics": [] }, { - "uid": "github/cheerfuluser/tessreduce", - "url": "https://github.com/CheerfulUser/TESSreduce", - "rel": "/software/repository/github/cheerfuluser/tessreduce", - "avatar": "https://avatars.githubusercontent.com/u/25831737?v=4", - "description": "Transient focused reduction for TESS data", + "uid": "github/rhysf/HaplotypeTools", + "url": "https://github.com/rhysf/HaplotypeTools", + "rel": "/software/repository/github/rhysf/HaplotypeTools", + "avatar": "https://avatars.githubusercontent.com/u/3695082?v=4", + "description": "A toolkit for identifying recombination and recombinant genotypes", "topics": [] }, { - "uid": "github/fbartolic/volcano", - "url": "https://github.com/fbartolic/volcano", - "rel": "/software/repository/github/fbartolic/volcano", - "avatar": "https://avatars.githubusercontent.com/u/18243408?v=4", - "description": "Mapping the surface of Jupiter's moon Io from one-dimensional time-series data.", + "uid": "github/jhparkastro/gpcal", + "url": "https://github.com/jhparkastro/gpcal", + "rel": "/software/repository/github/jhparkastro/gpcal", + "avatar": "https://avatars.githubusercontent.com/u/66363038?v=4", + "description": null, "topics": [] }, { - "uid": "github/jw-lin/lightbeam", - "url": "https://github.com/jw-lin/lightbeam", - "rel": "/software/repository/github/jw-lin/lightbeam", - "avatar": "https://avatars.githubusercontent.com/u/90280749?v=4", - "description": "simulate light through weakly-guiding waveguides using the finite-differences beam propagation method on an adaptive mesh", + "uid": "github/mwaskom/seaborn", + "url": "https://github.com/mwaskom/seaborn", + "rel": "/software/repository/github/mwaskom/seaborn", + "avatar": "https://avatars.githubusercontent.com/u/315810?v=4", + "description": "Statistical data visualization in Python", + "topics": [ + "python", + "data-visualization", + "data-science", + "matplotlib", + "pandas" + ] + }, + { + "uid": "github/V-Bernal/GeneNetTools", + "url": "https://github.com/V-Bernal/GeneNetTools", + "rel": "/software/repository/github/V-Bernal/GeneNetTools", + "avatar": "https://avatars.githubusercontent.com/u/44974039?v=4", + "description": "R package for Gaussian graphical models with (Ledoit Wolf) shrinkage ", "topics": [] }, { - "uid": "github/jw-lin/cbeam", - "url": "https://github.com/jw-lin/cbeam", - "rel": "/software/repository/github/jw-lin/cbeam", - "avatar": "https://avatars.githubusercontent.com/u/90280749?v=4", - "description": null, + "uid": "github/BioGearsEngine/core", + "url": "https://github.com/BioGearsEngine/core", + "rel": "/software/repository/github/BioGearsEngine/core", + "avatar": "https://avatars0.githubusercontent.com/u/8700591?v=4", + "description": "Repository for libbiogears and all core utilities", "topics": [] }, { - "uid": "github/technic960183/spherimatch", - "url": "https://github.com/technic960183/spherimatch", - "rel": "/software/repository/github/technic960183/spherimatch", - "avatar": "https://avatars.githubusercontent.com/u/48866415?v=4", - "description": "A Python package for cross-matching and self-matching in spherical coordinates.", + "uid": "github/tomasstolker/pycrires", + "url": "https://github.com/tomasstolker/pycrires", + "rel": "/software/repository/github/tomasstolker/pycrires", + "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", + "description": "Data reduction pipeline for VLT/CRIRES+", "topics": [] }, { - "uid": "github/ByrumLab/proteoDA", - "url": "https://github.com/ByrumLab/proteoDA", - "rel": "/software/repository/github/ByrumLab/proteoDA", - "avatar": "https://avatars.githubusercontent.com/u/55756150?v=4", - "description": null, + "uid": "github/tomasstolker/ARTES", + "url": "https://github.com/tomasstolker/ARTES", + "rel": "/software/repository/github/tomasstolker/ARTES", + "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", + "description": "Radiative transfer of polarized light in 3D exoplanet atmospheres", "topics": [] }, { - "uid": "github/VNNikolaidis/nnlib2Rcpp", - "url": "https://github.com/VNNikolaidis/nnlib2Rcpp", - "rel": "/software/repository/github/VNNikolaidis/nnlib2Rcpp", - "avatar": "https://avatars.githubusercontent.com/u/39312360?v=4", - "description": "An R package for Neural Nets created using nnlib2", + "uid": "github/tomasstolker/species", + "url": "https://github.com/tomasstolker/species", + "rel": "/software/repository/github/tomasstolker/species", + "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", + "description": "Toolkit for atmospheric characterization of directly imaged exoplanets", "topics": [] }, { - "uid": "github/swiss-seismological-service/DUGseis", - "url": "https://github.com/swiss-seismological-service/DUGseis", - "rel": "/software/repository/github/swiss-seismological-service/DUGseis", - "avatar": "https://avatars.githubusercontent.com/u/50695471?v=4", - "description": "Software for acquisition and processing of micro-seismic data", + "uid": "github/rrwick/Filtlong", + "url": "https://github.com/rrwick/Filtlong", + "rel": "/software/repository/github/rrwick/Filtlong", + "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", + "description": "quality filtering tool for long reads", "topics": [] }, { - "uid": "github/arcaldwell49/SimplyAgree", - "url": "https://github.com/arcaldwell49/SimplyAgree", - "rel": "/software/repository/github/arcaldwell49/SimplyAgree", - "avatar": "https://avatars.githubusercontent.com/u/24322628?v=4", - "description": "A simple R package for calculating absolute agreement and estimating required sample sizes for studies of absolute agreement", + "uid": "github/rrwick/Unicycler", + "url": "https://github.com/rrwick/Unicycler", + "rel": "/software/repository/github/rrwick/Unicycler", + "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", + "description": "hybrid assembly pipeline for bacterial genomes", "topics": [] }, { - "uid": "github/morpheus-project/morpheus", - "url": "https://github.com/morpheus-project/morpheus", - "rel": "/software/repository/github/morpheus-project/morpheus", - "avatar": "https://avatars.githubusercontent.com/u/46008492?v=4", - "description": "A Library For Generating Morphological Semantic Segmentation Maps of Astronomical Images", + "uid": "github/rrwick/Deepbinner", + "url": "https://github.com/rrwick/Deepbinner", + "rel": "/software/repository/github/rrwick/Deepbinner", + "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", + "description": "a signal-level demultiplexer for Oxford Nanopore reads", "topics": [] }, { - "uid": "github/MultiQC/MultiQC", - "url": "https://github.com/MultiQC/MultiQC", - "rel": "/software/repository/github/MultiQC/MultiQC", - "avatar": "https://avatars.githubusercontent.com/u/18548644?v=4", - "description": "Aggregate results from bioinformatics analyses across many samples into a single report.", - "topics": [ - "bioinformatics", - "analysis", - "pypi", - "bioconda", - "multiqc", - "python", - "data-visualization", - "quality-control", - "reporting", - "seqera", - "vizualisation" - ] + "uid": "github/rrwick/Porechop", + "url": "https://github.com/rrwick/Porechop", + "rel": "/software/repository/github/rrwick/Porechop", + "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", + "description": "adapter trimmer for Oxford Nanopore reads", + "topics": [] }, { - "uid": "github/biswajitmb/DarpanX", - "url": "https://github.com/biswajitmb/DarpanX", - "rel": "/software/repository/github/biswajitmb/DarpanX", - "avatar": "https://avatars.githubusercontent.com/u/65720146?v=4", - "description": "DarpanX is a Python 3 package that provides functionality to compute reflectivity and other specular optical functions of a multilayer or single layer mirror for different energy and angles as well as to fit the XRR measurements of the mirrors.", + "uid": "github/rrwick/Bandage", + "url": "https://github.com/rrwick/Bandage", + "rel": "/software/repository/github/rrwick/Bandage", + "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", + "description": "a Bioinformatics Application for Navigating De novo Assembly Graphs Easily", "topics": [] }, { - "uid": "github/hauselin/ollama-r", - "url": "https://github.com/hauselin/ollama-r", - "rel": "/software/repository/github/hauselin/ollama-r", - "avatar": "https://avatars.githubusercontent.com/u/7620977?v=4", - "description": "R library to run Ollama language models", + "uid": "github/simonprovost/scikit-longitudinal", + "url": "https://github.com/simonprovost/scikit-longitudinal", + "rel": "/software/repository/github/simonprovost/scikit-longitudinal", + "avatar": "https://avatars.githubusercontent.com/u/32747568?v=4", + "description": "\u2602\ufe0f Scikit-longitudinal (Sklong) is an open-source Python library & Scikit-Learn API compliant, tailored to longitudinal machine learning classification tasks. It is ideal for researchers, data scientists, and analysts, as it provides specialist tools for dealing with repeated-measures data challenges ", "topics": [ - "llms", - "r", - "ollama", - "ollama-api", - "ai", - "llm", - "api" + "classification", + "longitudinal", + "machine-learning", + "repeated-measurements", + "supervised-learning", + "longitudinal-classification", + "scikit-learn", + "longitudinal-data", + "longitudinal-studies" ] }, { - "uid": "github/phipsonlab/propeller-paper-analysis", - "url": "https://github.com/phipsonlab/propeller-paper-analysis", - "rel": "/software/repository/github/phipsonlab/propeller-paper-analysis", - "avatar": "https://avatars.githubusercontent.com/u/103480133?v=4", - "description": "The website hosts the analysis and evaluation of different statistical methods for determining differences in cell type proportions in single cell RNA-seq data.", + "uid": "github/astroboylrx/Rubble", + "url": "https://github.com/astroboylrx/Rubble", + "rel": "/software/repository/github/astroboylrx/Rubble", + "avatar": "https://avatars.githubusercontent.com/u/3999966?v=4", + "description": "Rubble: an implicit coagulation code for simulating solid size distribution evolution in protoplanetary disks", "topics": [] }, { - "uid": "github/PabloVD/CosmoGraphNet", - "url": "https://github.com/PabloVD/CosmoGraphNet", - "rel": "/software/repository/github/PabloVD/CosmoGraphNet", - "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", - "description": "Graph Neural Networks to predict the cosmological parameters or the galaxy power spectrum from galaxy catalogs.", - "topics": [] + "uid": "github/astroboylrx/PLAN", + "url": "https://github.com/astroboylrx/PLAN", + "rel": "/software/repository/github/astroboylrx/PLAN", + "avatar": "https://avatars.githubusercontent.com/u/3999966?v=4", + "description": "PLAN: PLanetesimal ANalyzer", + "topics": [ + "astronomy", + "astrophysics", + "athena", + "particles", + "barnes-hut", + "3d", + "vtk", + "mpi", + "openmp", + "cmake" + ] }, { - "uid": "github/PabloVD/HaloGraphNet", - "url": "https://github.com/PabloVD/HaloGraphNet", - "rel": "/software/repository/github/PabloVD/HaloGraphNet", - "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", - "description": "Predict halo masses from simulations via graph neural networks", + "uid": "github/atomec-project/atoMEC", + "url": "https://github.com/atomec-project/atoMEC", + "rel": "/software/repository/github/atomec-project/atoMEC", + "avatar": "https://avatars.githubusercontent.com/u/85865234?v=4", + "description": "Python-based average-atom code for simulations of high energy density phenomena such as in warm dense matter.", "topics": [ - "machine-learning", - "deep-learning", - "graph-neural-networks" + "electronic-structure", + "warm-dense-matter", + "density-functional-theory", + "atomic-physics", + "plasma-physics" ] }, { - "uid": "github/PabloVD/21cmDeepLearning", - "url": "https://github.com/PabloVD/21cmDeepLearning", - "rel": "/software/repository/github/PabloVD/21cmDeepLearning", - "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", - "description": "Python codes to extract the matter density field from a 21 cm map.", + "uid": "github/QibangLiu/PDLSM-FEM_mpi", + "url": "https://github.com/QibangLiu/PDLSM-FEM_mpi", + "rel": "/software/repository/github/QibangLiu/PDLSM-FEM_mpi", + "avatar": "https://avatars.githubusercontent.com/u/62950134?v=4", + "description": "PDLSM-FEM solver is a parallel implementation of (adaptively) coupled peridynamics least squares minimization and finite element method (PDLSM-FEM) in 2D and 3D using MPI parallelism. This cross-platform solver is written in a C++ language and includes implicit static, explicit dynamic, and implicit dynamic solvers for structure analysis under displacement or traction loading.", "topics": [] }, { - "uid": "github/PabloVD/HAYASHI", - "url": "https://github.com/PabloVD/HAYASHI", - "rel": "/software/repository/github/PabloVD/HAYASHI", - "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", - "description": "Python library for 21 cm forest computations.", - "topics": [] + "uid": "github/medvedevgroup/TwoPaCo", + "url": "https://github.com/medvedevgroup/TwoPaCo", + "rel": "/software/repository/github/medvedevgroup/TwoPaCo", + "avatar": "https://avatars.githubusercontent.com/u/6886846?v=4", + "description": "A fast constructor of the compressed de Bruijn graph from many genomes", + "topics": [ + "bioinformatics", + "graph-algorithms", + "comparative-genomics", + "de-bruijn-graphs", + "genomics" + ] }, { - "uid": "github/galaxyproject/ansible-tiaas2", - "url": "https://github.com/galaxyproject/ansible-tiaas2", - "rel": "/software/repository/github/galaxyproject/ansible-tiaas2", - "avatar": "https://avatars.githubusercontent.com/u/7937847?v=4", - "description": "Ansible role for deploying TIaaS2", + "uid": "github/medvedevgroup/varmatch", + "url": "https://github.com/medvedevgroup/varmatch", + "rel": "/software/repository/github/medvedevgroup/varmatch", + "avatar": "https://avatars.githubusercontent.com/u/6886846?v=4", + "description": "robust matching of small variant datasets using flexible scoring schemes", "topics": [] }, { - "uid": "github/galaxyproject/galaxy-lib", - "url": "https://github.com/galaxyproject/galaxy-lib", - "rel": "/software/repository/github/galaxyproject/galaxy-lib", - "avatar": "https://avatars.githubusercontent.com/u/7937847?v=4", - "description": "Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.", + "uid": "github/simonehagey/orbdot", + "url": "https://github.com/simonehagey/orbdot", + "rel": "/software/repository/github/simonehagey/orbdot", + "avatar": "https://avatars.githubusercontent.com/u/71101756?v=4", + "description": "A Python package for studying secular evolution of exoplanet orbits using observational data.", "topics": [ - "usegalaxy", - "library", - "python" + "exoplanet-transits", + "exoplanets", + "exoplanet-radial-velocities", + "model-fitting", + "nested-sampling", + "orbital-evolution" ] }, { - "uid": "github/mzechmeister/viper", - "url": "https://github.com/mzechmeister/viper", - "rel": "/software/repository/github/mzechmeister/viper", - "avatar": "https://avatars.githubusercontent.com/u/32583239?v=4", - "description": null, + "uid": "github/GammaCascade/GCascade", + "url": "https://github.com/GammaCascade/GCascade", + "rel": "/software/repository/github/GammaCascade/GCascade", + "avatar": "https://avatars.githubusercontent.com/u/37936611?v=4", + "description": "Gamma-ray propagation package for Wolfram Mathematica", "topics": [] }, { - "uid": "github/mzechmeister/serval", - "url": "https://github.com/mzechmeister/serval", - "rel": "/software/repository/github/mzechmeister/serval", - "avatar": "https://avatars.githubusercontent.com/u/32583239?v=4", - "description": "calculate radial velocities from stellar spectra", + "uid": "github/JuliaHelmecke/MetaboMAPS", + "url": "https://github.com/JKoblitz/MetaboMAPS", + "rel": "/software/repository/github/JuliaHelmecke/MetaboMAPS", + "avatar": "https://avatars.githubusercontent.com/u/22150395?v=4", + "description": "Data visualization on metabolic pathway maps.", "topics": [] }, { - "uid": "github/gridap/GridapSolvers.jl", - "url": "https://github.com/gridap/GridapSolvers.jl", - "rel": "/software/repository/github/gridap/GridapSolvers.jl", - "avatar": "https://avatars.githubusercontent.com/u/49163828?v=4", - "description": "Solvers and preconditioners for the Gridap ecosystem.", + "uid": "github/ebellm/pyraf-dbsp", + "url": "https://github.com/ebellm/pyraf-dbsp", + "rel": "/software/repository/github/ebellm/pyraf-dbsp", + "avatar": "https://avatars.githubusercontent.com/u/733983?v=4", + "description": " :telescope: A PyRAF-based reduction pipeline for spectra taken with the Palomar 200-inch Double Spectrograph.", "topics": [] }, { - "uid": "github/gridap/Gridap.jl", - "url": "https://github.com/gridap/Gridap.jl", - "rel": "/software/repository/github/gridap/Gridap.jl", - "avatar": "https://avatars0.githubusercontent.com/u/49163828?v=4", - "description": "Grid-based approximation of partial differential equations in Julia", + "uid": "github/felixbur/nkululeko", + "url": "https://github.com/felixbur/nkululeko", + "rel": "/software/repository/github/felixbur/nkululeko", + "avatar": "https://avatars.githubusercontent.com/u/2063797?v=4", + "description": "Machine learning speaker characteristics", "topics": [ - "julia", - "pdes", - "partial-differential-equations", - "finite-elements", - "numerical-methods", - "gridap" + "speech", + "machine-learning", + "pytorch" ] }, { - "uid": "github/GeoArkadeep/Stresslog", - "url": "https://github.com/GeoArkadeep/Stresslog", - "rel": "/software/repository/github/GeoArkadeep/Stresslog", - "avatar": "https://avatars.githubusercontent.com/u/160126374?v=4", - "description": "Python package to read well logs and model geomechanical properties.", - "topics": [ - "cross-platform", - "geomechanics", - "las-files", - "pore-pressure-prediction", - "well-logs", - "dlis" - ] + "uid": "github/Ambuj-UF/APOP", + "url": "https://github.com/Ambuj-UF/APOP", + "rel": "/software/repository/github/Ambuj-UF/APOP", + "avatar": "https://avatars.githubusercontent.com/u/7588003?v=4", + "description": "Allostery pocket prediction", + "topics": [] }, { - "uid": "github/HAWinther/FML", - "url": "https://github.com/HAWinther/FML", - "rel": "/software/repository/github/HAWinther/FML", - "avatar": "https://avatars.githubusercontent.com/u/10915858?v=4", - "description": "A C++ library for working with particles and grids in a parallel setting.", + "uid": "github/marcelauliano/MitoHiFi", + "url": "https://github.com/marcelauliano/MitoHiFi", + "rel": "/software/repository/github/marcelauliano/MitoHiFi", + "avatar": "https://avatars.githubusercontent.com/u/4116164?v=4", + "description": "Find, circularise and annotate mitogenome from PacBio assemblies", "topics": [] }, { - "uid": "github/HAWinther/MG-PICOLA-PUBLIC", - "url": "https://github.com/HAWinther/MG-PICOLA-PUBLIC", - "rel": "/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", - "avatar": "https://avatars.githubusercontent.com/u/10915858?v=4", - "description": "This is a modified version of the L-PICOLA code extending the COLA approach for simulating cosmological structure formation to theories that exhibit scale-dependent growth. It can compute matter power-spectra (CDM and total), redshift-space multipole power-spectra P0,P2,P4 and do halofinding on the fly. It can also include the effects of massive neutrinos on structure formation.", + "uid": "github/gwastro/pycbc", + "url": "https://github.com/gwastro/pycbc", + "rel": "/software/repository/github/gwastro/pycbc", + "avatar": "https://avatars.githubusercontent.com/u/11262917?v=4", + "description": "Core package to analyze gravitational-wave data, find signals, and study their parameters. This package was used in the first direct detection of gravitational waves (GW150914), and is used in the ongoing analysis of LIGO/Virgo data. ", "topics": [ - "n-body", - "n-body-simulator", - "lcdm", - "cola", - "cosmology", - "power-spectrum", - "growth-factor" + "astronomy", + "physics", + "gravity", + "ligo", + "gravitational-waves", + "pycbc", + "analysis", + "python", + "black-hole", + "neutron-star", + "gwastro", + "virgo", + "signal-processing", + "open-science", + "cosmic-explorer", + "einstein-telescope", + "lisa" ] }, { - "uid": "github/robin-janssen/CODES-Benchmark", - "url": "https://github.com/robin-janssen/CODES-Benchmark", - "rel": "/software/repository/github/robin-janssen/CODES-Benchmark", - "avatar": "https://avatars.githubusercontent.com/u/82322346?v=4", - "description": "Benchmarking Surrogates for coupled ODE systems.", - "topics": [ - "chemical-reaction-networks", - "deeponet", - "neuralode", - "ode", - "operator-learning", - "surrogate-models" - ] + "uid": "github/ArgoCanada/argodata", + "url": "https://github.com/ArgoCanada/argodata", + "rel": "/software/repository/github/ArgoCanada/argodata", + "avatar": "https://avatars.githubusercontent.com/u/63421088?v=4", + "description": "Download Argo Ocean Float Data", + "topics": [] }, { - "uid": "github/MichielCottaar/velbin", - "url": "https://github.com/MichielCottaar/velbin", - "rel": "/software/repository/github/MichielCottaar/velbin", - "avatar": "https://avatars.githubusercontent.com/u/4652580?v=4", - "description": "No relation to the Russian village", + "uid": "github/sinanozaydin/pide", + "url": "https://github.com/sinanozaydin/pide", + "rel": "/software/repository/github/sinanozaydin/pide", + "avatar": "https://avatars.githubusercontent.com/u/63723568?v=4", + "description": "A python library for petrophysical calculations.", "topics": [] }, { - "uid": "github/jcibanezm/DustCharge", - "url": "https://github.com/jcibanezm/DustCharge", - "rel": "/software/repository/github/jcibanezm/DustCharge", - "avatar": "https://avatars.githubusercontent.com/u/3493686?v=4", - "description": "Calculate the equilibrium charge distribution for a dust grain of a given size and composition, depending on the local interstellar medium conditions, such as: density, temperature, ionization fraction, local radiation field strength and cosmic ray ionization fraction.", + "uid": "github/mpi4py/shmem4py", + "url": "https://github.com/mpi4py/shmem4py", + "rel": "/software/repository/github/mpi4py/shmem4py", + "avatar": "https://avatars.githubusercontent.com/u/5232933?v=4", + "description": null, "topics": [] }, { - "uid": "github/arq5x/poretools", - "url": "https://github.com/arq5x/poretools", - "rel": "/software/repository/github/arq5x/poretools", - "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", - "description": "a toolkit for working with Oxford nanopore data", - "topics": [] + "uid": "github/InsightSoftwareConsortium/ITK", + "url": "https://github.com/InsightSoftwareConsortium/ITK", + "rel": "/software/repository/github/InsightSoftwareConsortium/ITK", + "avatar": "https://avatars2.githubusercontent.com/u/319479?v=4", + "description": "Insight Toolkit (ITK) -- Official Repository", + "topics": [ + "itk", + "insight-toolkit", + "image-analysis", + "medical-imaging", + "scientific-computing", + "open-science", + "open-source", + "reproducible-research", + "numfocus", + "cpp", + "python" + ] }, { - "uid": "github/arq5x/bedtools2", - "url": "https://github.com/arq5x/bedtools2", - "rel": "/software/repository/github/arq5x/bedtools2", - "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", - "description": "bedtools - the swiss army knife for genome arithmetic", + "uid": "github/dolfin-adjoint/pyadjoint", + "url": "https://github.com/dolfin-adjoint/pyadjoint", + "rel": "/software/repository/github/dolfin-adjoint/pyadjoint", + "avatar": "https://avatars.githubusercontent.com/u/58938451?v=4", + "description": "The algorithmic differentation tool pyadjoint and add-ons.", "topics": [] }, { - "uid": "github/arq5x/lumpy-sv", - "url": "https://github.com/arq5x/lumpy-sv", - "rel": "/software/repository/github/arq5x/lumpy-sv", - "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", - "description": "lumpy: a general probabilistic framework for structural variant discovery", + "uid": "github/ggciag/mandyoc", + "url": "https://github.com/ggciag/mandyoc", + "rel": "/software/repository/github/ggciag/mandyoc", + "avatar": "https://avatars.githubusercontent.com/u/87135176?v=4", + "description": "MANDYOC is a finite element code written on top of the PETSc library to simulate thermo-chemical convection of the Earth's mantle", "topics": [] }, { - "uid": "github/arq5x/grabix", - "url": "https://github.com/arq5x/grabix", - "rel": "/software/repository/github/arq5x/grabix", - "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", - "description": " a wee tool for random access into BGZF files.", + "uid": "github/afeinstein20/stella", + "url": "https://github.com/afeinstein20/stella", + "rel": "/software/repository/github/afeinstein20/stella", + "avatar": "https://avatars3.githubusercontent.com/u/5041100?v=4", + "description": "For characterizing flares with convolutional neural networks", "topics": [] }, { - "uid": "github/sib-swiss/pftools3", - "url": "https://github.com/sib-swiss/pftools3", - "rel": "/software/repository/github/sib-swiss/pftools3", - "avatar": "https://avatars.githubusercontent.com/u/17580039?v=4", - "description": "A suite of tools to build and search generalized profiles", + "uid": "github/afeinstein20/eleanor", + "url": "https://github.com/afeinstein20/eleanor", + "rel": "/software/repository/github/afeinstein20/eleanor", + "avatar": "https://avatars.githubusercontent.com/u/5041100?v=4", + "description": "A tool for light curve extraction from the TESS FFIs.", + "topics": [] + }, + { + "uid": "github/AutoResearch/sweetbean", + "url": "https://github.com/AutoResearch/sweetbean", + "rel": "/software/repository/github/AutoResearch/sweetbean", + "avatar": "https://avatars.githubusercontent.com/u/93661143?v=4", + "description": "A declarative programming language built in Python, designed for the synthesis of behavioral experiments", "topics": [ - "profile", - "protein-domains", - "motif", - "sequence-analysis" + "automated-documentation", + "behavioral-experiments", + "online-behavioral-experiments", + "synthetic-participants" ] }, { - "uid": "github/sib-swiss/glittr", - "url": "https://github.com/sib-swiss/glittr", - "rel": "/software/repository/github/sib-swiss/glittr", - "avatar": "https://avatars.githubusercontent.com/u/17580039?v=4", - "description": "A web application for finding and comparing bioinformatics training materials on GitHub and GitLab", + "uid": "github/cloudflex-project/cloudflex", + "url": "https://github.com/cloudflex-project/cloudflex", + "rel": "/software/repository/github/cloudflex-project/cloudflex", + "avatar": "https://avatars.githubusercontent.com/u/149110839?v=4", + "description": null, "topics": [] }, { - "uid": "github/Brauckhoff/biopixR", - "url": "https://github.com/Brauckhoff/biopixR", - "rel": "/software/repository/github/Brauckhoff/biopixR", - "avatar": "https://avatars.githubusercontent.com/u/121032772?v=4", - "description": "R Package for bioimage analysis", + "uid": "github/daler/pybedtools", + "url": "https://github.com/daler/pybedtools", + "rel": "/software/repository/github/daler/pybedtools", + "avatar": "https://avatars.githubusercontent.com/u/115406?v=4", + "description": "Python wrapper -- and more -- for BEDTools (bioinformatics tools for \"genome arithmetic\")", "topics": [] }, { - "uid": "github/saphir746/BiobankRead-Bash", - "url": "https://github.com/saphir746/BiobankRead-Bash", - "rel": "/software/repository/github/saphir746/BiobankRead-Bash", - "avatar": "https://avatars.githubusercontent.com/u/11505614?v=4", - "description": "Python scripts to extract and pre-process UKB data", + "uid": "github/daler/gffutils", + "url": "https://github.com/daler/gffutils", + "rel": "/software/repository/github/daler/gffutils", + "avatar": "https://avatars.githubusercontent.com/u/115406?v=4", + "description": "GFF and GTF file manipulation and interconversion", "topics": [] }, { - "uid": "github/combustiontoolbox/combustion_toolbox", - "url": "https://github.com/CombustionToolbox/combustion_toolbox", - "rel": "/software/repository/github/combustiontoolbox/combustion_toolbox", - "avatar": "https://avatars.githubusercontent.com/u/165309827?v=4", - "description": "A MATLAB-GUI based open-source tool for solving gaseous combustion problems", - "topics": [ - "chemical-equilibrium", - "thermochemistry", - "matlab", - "detonation", - "app", - "open-source", - "shock-waves", - "toolbox", - "windows", - "linux", - "macos", - "hypersonics", - "ionization", - "rocket", - "dissociation", - "thermochemical-code", - "combustion", - "combustion-toolbox" - ] - }, - { - "uid": "github/pyroll-project/pyroll-core", - "url": "https://github.com/pyroll-project/pyroll-core", - "rel": "/software/repository/github/pyroll-project/pyroll-core", - "avatar": "https://avatars.githubusercontent.com/u/100946430?v=4", - "description": "PyRoll rolling simulation framework - core library.", - "topics": [ - "groove-rolling", - "materials", - "metal-forming", - "pyroll", - "python", - "rolling", - "simulation" - ] - }, - { - "uid": "github/exciting/excitingtools", - "url": "https://github.com/exciting/excitingtools", - "rel": "/software/repository/github/exciting/excitingtools", - "avatar": "https://avatars.githubusercontent.com/u/436341?v=4", - "description": "An exciting Workflow Tool", + "uid": "github/zheng-lh/UBER", + "url": "https://github.com/zheng-lh/UBER", + "rel": "/software/repository/github/zheng-lh/UBER", + "avatar": "https://avatars.githubusercontent.com/u/81456511?v=4", + "description": "Universal Boltzmann Equation Solver", "topics": [] }, { - "uid": "github/BU-hammerTeam/PyHammer", - "url": "https://github.com/BU-hammerTeam/PyHammer", - "rel": "/software/repository/github/BU-hammerTeam/PyHammer", - "avatar": "https://avatars.githubusercontent.com/u/21038240?v=4", - "description": "A Python Spectral Typing Suite", - "topics": [ - "spectral-types", - "metallicity", - "python", - "spectral-lines" - ] + "uid": "github/twosixlabs/magicwand-datatool", + "url": "https://github.com/twosixlabs/magicwand-datatool", + "rel": "/software/repository/github/twosixlabs/magicwand-datatool", + "avatar": "https://avatars.githubusercontent.com/u/6350922?v=4", + "description": "Magicwand tool to generate tcp traffic data", + "topics": [] }, { - "uid": "github/geodynamics/Rayleigh", - "url": "https://github.com/geodynamics/Rayleigh", - "rel": "/software/repository/github/geodynamics/Rayleigh", - "avatar": "https://avatars.githubusercontent.com/u/4052461?v=4", - "description": "Rayleigh: Pseudo-spectral MHD", + "uid": "github/justinmathias/isocalcR", + "url": "https://github.com/justinmathias/isocalcR", + "rel": "/software/repository/github/justinmathias/isocalcR", + "avatar": "https://avatars.githubusercontent.com/u/52084610?v=4", + "description": "R Package containing widely used isotope theory functions", "topics": [] }, { - "uid": "github/geodynamics/burnman", - "url": "https://github.com/geodynamics/burnman", - "rel": "/software/repository/github/geodynamics/burnman", - "avatar": "https://avatars.githubusercontent.com/u/4052461?v=4", - "description": "BurnMan is a library for modeling mantle thermodynamics and thermoelasticity constrained by mineral physics experiments.", + "uid": "github/asmusskar/ALVA", + "url": "https://github.com/asmusskar/ALVA", + "rel": "/software/repository/github/asmusskar/ALVA", + "avatar": "https://avatars2.githubusercontent.com/u/46743643?v=4", + "description": "ALVA is a MATLAB-package for advanced pavement modeling that is highly adaptive", "topics": [] }, { - "uid": "github/cbielow/PTXQC", - "url": "https://github.com/cbielow/PTXQC", - "rel": "/software/repository/github/cbielow/PTXQC", - "avatar": "https://avatars.githubusercontent.com/u/6008722?v=4", - "description": "A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant", + "uid": "github/JonasRieger/ldaPrototype", + "url": "https://github.com/JonasRieger/ldaPrototype", + "rel": "/software/repository/github/JonasRieger/ldaPrototype", + "avatar": "https://avatars0.githubusercontent.com/u/23215382?v=4", + "description": "Determine a Prototype from a number of runs of Latent Dirichlet Allocation (LDA) measuring its similarities with S-CLOP: A procedure to select the LDA run with highest mean pairwise similarity, which is measured by S-CLOP (Similarity of multiple sets by Clustering with Local Pruning), to all other runs.", "topics": [ - "maxquant", - "quality-control", - "report", - "metric", - "proteomics", - "heatmap", - "match-between-runs", - "drag-and-drop", - "openms", - "mztab", - "quality-metrics", - "hacktoberfest" + "topicmodeling", + "topicmodelling", + "lda", + "topic-models", + "topic-model", + "topic-similarities", + "text-mining", + "textdata", + "latent-dirichlet-allocation", + "modelselection", + "model-selection" ] }, { - "uid": "github/lskatz/fasten", - "url": "https://github.com/lskatz/fasten", - "rel": "/software/repository/github/lskatz/fasten", - "avatar": "https://avatars.githubusercontent.com/u/14798?v=4", - "description": ":construction_worker: Fasten toolkit, for streaming operations on fastq files", + "uid": "github/Patrick-Cole/pygmi", + "url": "https://github.com/Patrick-Cole/pygmi", + "rel": "/software/repository/github/Patrick-Cole/pygmi", + "avatar": "https://avatars.githubusercontent.com/u/8198125?v=4", + "description": "PyGMI - Python Geophysical Modelling and Interpretation", "topics": [ - "bioinformatics", - "fastq-files", - "rust" + "geophysics", + "remote-sensing", + "seismology" ] }, { - "uid": "github/lskatz/SneakerNet", - "url": "https://github.com/lskatz/SneakerNet", - "rel": "/software/repository/github/lskatz/SneakerNet", - "avatar": "https://avatars.githubusercontent.com/u/14798?v=4", - "description": ":feet: QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run", - "topics": [] + "uid": "github/supernnova/SuperNNova", + "url": "https://github.com/supernnova/SuperNNova", + "rel": "/software/repository/github/supernnova/SuperNNova", + "avatar": "https://avatars.githubusercontent.com/u/49273114?v=4", + "description": "Open Source Photometric classification https://supernnova.readthedocs.io", + "topics": [ + "cosmology", + "supernova", + "deep-learning", + "arxiv", + "reproducible-science", + "recurrent-neural-networks", + "pandas", + "python", + "pytorch", + "bayesian-neural-networks", + "bayesian-deep-learning", + "bayesian-statistics" + ] }, { - "uid": "github/myinxd/mcrgnet", - "url": "https://github.com/myinxd/MCRGNet", - "rel": "/software/repository/github/myinxd/mcrgnet", - "avatar": "https://avatars.githubusercontent.com/u/11346940?v=4", - "description": "Morphological Classification of Radio Galaxy Network", + "uid": "github/pixixiaonaogou/MLSDR", + "url": "https://github.com/pixixiaonaogou/MLSDR", + "rel": "/software/repository/github/pixixiaonaogou/MLSDR", + "avatar": "https://avatars.githubusercontent.com/u/34858642?v=4", + "description": null, "topics": [] }, { - "uid": "github/hyriver/hysetter", - "url": "https://github.com/hyriver/hysetter", - "rel": "/software/repository/github/hyriver/hysetter", - "avatar": "https://avatars.githubusercontent.com/u/109259800?v=4", - "description": "A command-line tool for getting hydroclimate data within CONUS using HyRiver", - "topics": [ - "climate-data", - "daymet", - "gridmet", - "hydrology", - "nldas", - "nwis" - ] - }, - { - "uid": "github/Filter-Bubble/e2e-Dutch", - "url": "https://github.com/Filter-Bubble/e2e-Dutch", - "rel": "/software/repository/github/Filter-Bubble/e2e-Dutch", - "avatar": "https://avatars.githubusercontent.com/u/42996958?v=4", - "description": "Code for e2e coref model in Dutch", + "uid": "github/abs2k12/COCOA", + "url": "https://github.com/abs2k12/COCOA", + "rel": "/software/repository/github/abs2k12/COCOA", + "avatar": "https://avatars.githubusercontent.com/u/2988762?v=4", + "description": "COCOA Code for Simulating Observations of Star Cluster Simulations", "topics": [] }, { - "uid": "github/Filter-Bubble/stroll", - "url": "https://github.com/Filter-Bubble/stroll", - "rel": "/software/repository/github/Filter-Bubble/stroll", - "avatar": "https://avatars.githubusercontent.com/u/42996958?v=4", - "description": "Graph based Sematic Role Labeller", + "uid": "github/nitadori/SCF-FDPS", + "url": "https://github.com/nitadori/SCF-FDPS", + "rel": "/software/repository/github/nitadori/SCF-FDPS", + "avatar": "https://avatars.githubusercontent.com/u/4830914?v=4", + "description": null, "topics": [] }, { - "uid": "github/mwanakijiji/rrlfe", - "url": "https://github.com/mwanakijiji/rrlfe", - "rel": "/software/repository/github/mwanakijiji/rrlfe", - "avatar": "https://avatars.githubusercontent.com/u/11987227?v=4", + "uid": "github/tomoyukif/MCPtaggR", + "url": "https://github.com/tomoyukif/MCPtaggR", + "rel": "/software/repository/github/tomoyukif/MCPtaggR", + "avatar": "https://avatars.githubusercontent.com/u/40555133?v=4", "description": null, "topics": [] }, { - "uid": "github/hugoledoux/startinpy", - "url": "https://github.com/hugoledoux/startinpy", - "rel": "/software/repository/github/hugoledoux/startinpy", - "avatar": "https://avatars.githubusercontent.com/u/1546518?v=4", - "description": "A Python library for modelling and processing 2.5D terrains using a (2D) Delaunay triangulation.", - "topics": [ - "gis", - "interpolation", - "terrain", - "tin", - "delaunay-triangulation" - ] + "uid": "github/AA-ALERT/frbcatdb", + "url": "https://github.com/AA-ALERT/frbcatdb", + "rel": "/software/repository/github/AA-ALERT/frbcatdb", + "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", + "description": "Fast Radio Burst (FRB) Catalogue DB management", + "topics": [] }, { - "uid": "github/GOBLIN-Proj/goblin_lite", - "url": "https://github.com/GOBLIN-Proj/goblin_lite", - "rel": "/software/repository/github/GOBLIN-Proj/goblin_lite", - "avatar": "https://avatars.githubusercontent.com/u/164409538?v=4", - "description": "A goblin tool for the generation of static land balance scenarios and environment", - "topics": [ - "goblin" - ] + "uid": "github/AA-ALERT/AMBER", + "url": "https://github.com/AA-ALERT/AMBER", + "rel": "/software/repository/github/AA-ALERT/AMBER", + "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", + "description": "A many-core transient searching pipeline, designed mainly to search in real-time for Fast Radio Bursts.", + "topics": [] }, { - "uid": "github/sethspjohnso/satmc", - "url": "https://github.com/sethspjohnso/satmc", - "rel": "/software/repository/github/sethspjohnso/satmc", - "avatar": "https://avatars.githubusercontent.com/u/5375696?v=4", - "description": "Current versions of IDL and Python based SATMC", + "uid": "github/AA-ALERT/Dedispersion", + "url": "https://github.com/AA-ALERT/Dedispersion", + "rel": "/software/repository/github/AA-ALERT/Dedispersion", + "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", + "description": "Radio astronomy dedispersion algorithm implemented for many-core accelerators.", "topics": [] }, { - "uid": "github/daniloceano/LorenzCycleToolkit", - "url": "https://github.com/daniloceano/LorenzCycleToolkit", - "rel": "/software/repository/github/daniloceano/LorenzCycleToolkit", - "avatar": "https://avatars.githubusercontent.com/u/56005607?v=4", - "description": "Program for computing the Lorenz Energy Cycle (LEC) in a closed region of the atmosphere.", - "topics": [ - "atmospheric-science", - "data-analysis-python", - "energetics", - "meteorology", - "scientific-research" - ] + "uid": "github/AA-ALERT/AstroData", + "url": "https://github.com/AA-ALERT/AstroData", + "rel": "/software/repository/github/AA-ALERT/AstroData", + "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", + "description": "Set of C++ classes to operate on radio astronomical data.", + "topics": [] }, { - "uid": "github/daniloceano/CycloPhaser", - "url": "https://github.com/daniloceano/CycloPhaser", - "rel": "/software/repository/github/daniloceano/CycloPhaser", - "avatar": "https://avatars.githubusercontent.com/u/56005607?v=4", - "description": "This package calculates extratropical cyclone life cycle phases from vorticity data using Python.", + "uid": "github/AA-ALERT/frbcat-web", + "url": "https://github.com/AA-ALERT/frbcat-web", + "rel": "/software/repository/github/AA-ALERT/frbcat-web", + "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", + "description": "FRBCat web", "topics": [] }, { - "uid": "github/era-urban/wrfpy", - "url": "https://github.com/ERA-URBAN/wrfpy", - "rel": "/software/repository/github/era-urban/wrfpy", - "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", - "description": null, + "uid": "github/rossfadely/star-galaxy-classification", + "url": "https://github.com/rossfadely/star-galaxy-classification", + "rel": "/software/repository/github/rossfadely/star-galaxy-classification", + "avatar": "https://avatars.githubusercontent.com/u/1253511?v=4", + "description": "Classification of astronomical objects using photometry", "topics": [] }, { - "uid": "github/smithlabcode/dnmtools", - "url": "https://github.com/smithlabcode/dnmtools", - "rel": "/software/repository/github/smithlabcode/dnmtools", - "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", - "description": "Tools for analyzing DNA methylation data", + "uid": "github/BitSeq/BitSeq", + "url": "https://github.com/BitSeq/BitSeq", + "rel": "/software/repository/github/BitSeq/BitSeq", + "avatar": "https://avatars.githubusercontent.com/u/6389353?v=4", + "description": "BitSeq code", "topics": [] }, { - "uid": "github/smithlabcode/falco", - "url": "https://github.com/smithlabcode/falco", - "rel": "/software/repository/github/smithlabcode/falco", - "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", - "description": "A C++ drop-in replacement of FastQC to assess the quality of sequence read data", + "uid": "github/domenico-simone/rmlst_api", + "url": "https://github.com/domenico-simone/rmlst_api", + "rel": "/software/repository/github/domenico-simone/rmlst_api", + "avatar": "https://avatars.githubusercontent.com/u/11278300?v=4", + "description": "Run rmlst API through python script", "topics": [] }, { - "uid": "github/smithlabcode/preseq", - "url": "https://github.com/smithlabcode/preseq", - "rel": "/software/repository/github/smithlabcode/preseq", - "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", - "description": "Software for predicting library complexity and genome coverage in high-throughput sequencing.", + "uid": "github/Parsl/parsl", + "url": "https://github.com/Parsl/parsl", + "rel": "/software/repository/github/Parsl/parsl", + "avatar": "https://avatars0.githubusercontent.com/u/26490185?v=4", + "description": "Parsl - Parallel Scripting Library", "topics": [] }, { - "uid": "github/smithlabcode/abismal", - "url": "https://github.com/smithlabcode/abismal", - "rel": "/software/repository/github/smithlabcode/abismal", - "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", - "description": "Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.", - "topics": [ - "bioinformatics", - "bisulfite-sequencing", - "mapping-algorithms" - ] + "uid": "github/PyLops/pylops-mpi", + "url": "https://github.com/PyLops/pylops-mpi", + "rel": "/software/repository/github/PyLops/pylops-mpi", + "avatar": "https://avatars.githubusercontent.com/u/74298005?v=4", + "description": "MPI-powered PyLops with MPI4Py", + "topics": [] }, { - "uid": "github/csbioinfopk/iSumoK-PseAAC", - "url": "https://github.com/csbioinfopk/iSumoK-PseAAC", - "rel": "/software/repository/github/csbioinfopk/iSumoK-PseAAC", - "avatar": "https://avatars.githubusercontent.com/u/53048263?v=4", - "description": "This is a GitHub repository page that is maintained by Bioinformatics Lab at the Department of Computer Science, University of Management and Technology, Lahore, Pakistan.", + "uid": "github/jmcbroome/BTE", + "url": "https://github.com/jmcbroome/BTE", + "rel": "/software/repository/github/jmcbroome/BTE", + "avatar": "https://avatars.githubusercontent.com/u/42075829?v=4", + "description": "Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit", "topics": [] }, { - "uid": "github/ashleyblawas/respdetect", - "url": "https://github.com/ashleyblawas/respdetect", - "rel": "/software/repository/github/ashleyblawas/respdetect", - "avatar": "https://avatars.githubusercontent.com/u/33466273?v=4", - "description": "A tool to detect respirations from kinematic data", + "uid": "github/dbuscher/pois", + "url": "https://github.com/dbuscher/pois", + "rel": "/software/repository/github/dbuscher/pois", + "avatar": "https://avatars.githubusercontent.com/u/1148470?v=4", + "description": "Python framework simulating the data from a ground-based optical interferometer", "topics": [] }, { - "uid": "github/NKI-AI/direct", - "url": "https://github.com/NKI-AI/direct", - "rel": "/software/repository/github/NKI-AI/direct", - "avatar": "https://avatars.githubusercontent.com/u/44191196?v=4", - "description": "Deep learning framework for MRI reconstruction", + "uid": "github/devanshkv/fetch", + "url": "https://github.com/devanshkv/fetch", + "rel": "/software/repository/github/devanshkv/fetch", + "avatar": "https://avatars.githubusercontent.com/u/5568950?v=4", + "description": "A set of deep learning models for FRB/RFI binary classification. ", "topics": [ - "pytorch", + "fast-radio-bursts", "deep-learning", - "mri-reconstruction", - "inverse-problems", - "medical-imaging", - "fastmri-challenge" + "transfer-learning", + "binary-classification" ] }, { - "uid": "github/sPaMFouR/RedPipe", - "url": "https://github.com/sPaMFouR/RedPipe", - "rel": "/software/repository/github/sPaMFouR/RedPipe", - "avatar": "https://avatars.githubusercontent.com/u/13534521?v=4", - "description": "Python Scripts for Data Reduction and Analysis", + "uid": "github/SchlossLab/mikropml", + "url": "https://github.com/SchlossLab/mikropml", + "rel": "/software/repository/github/SchlossLab/mikropml", + "avatar": "https://avatars.githubusercontent.com/u/7229330?v=4", + "description": "User-Friendly R Package for Supervised Machine Learning Pipelines", "topics": [ - "data-reduction", - "photometry-pipeline", - "spectroscopy", - "transients", - "analysis" + "machine-learning", + "r-package", + "rstats" ] }, { - "uid": "github/VMBoehm/MADLens", - "url": "https://github.com/VMBoehm/MADLens", - "rel": "/software/repository/github/VMBoehm/MADLens", - "avatar": "https://avatars.githubusercontent.com/u/22053912?v=4", - "description": "a differentiable lensing simulator", + "uid": "github/Single-Cell-Graph-Learning/scSGL", + "url": "https://github.com/Single-Cell-Graph-Learning/scSGL", + "rel": "/software/repository/github/Single-Cell-Graph-Learning/scSGL", + "avatar": "https://avatars.githubusercontent.com/u/79270392?v=4", + "description": "Signed Graph Learning for single cell RNA-seq data", "topics": [] }, { - "uid": "github/tobiasrausch/alfred", - "url": "https://github.com/tobiasrausch/alfred", - "rel": "/software/repository/github/tobiasrausch/alfred", - "avatar": "https://avatars1.githubusercontent.com/u/5946458?v=4", - "description": "BAM Statistics, Feature Counting and Annotation", - "topics": [ - "insert-size", - "coverage-distribution", - "sequencing", - "quality", - "read-counts", - "quality-control", - "alfred", - "alignment-metrics", - "feature-counting" - ] + "uid": "github/langfzac/Photodynamics.jl", + "url": "https://github.com/langfzac/Photodynamics.jl", + "rel": "/software/repository/github/langfzac/Photodynamics.jl", + "avatar": "https://avatars.githubusercontent.com/u/37716146?v=4", + "description": "Differentiable transit light curves", + "topics": [] }, { - "uid": "github/tobiasrausch/wally", - "url": "https://github.com/tobiasrausch/wally", - "rel": "/software/repository/github/tobiasrausch/wally", - "avatar": "https://avatars.githubusercontent.com/u/5946458?v=4", - "description": "Wally: Visualization of aligned sequencing reads and contigs", - "topics": [ - "genomics", - "sequencing", - "visualization", - "alignment", - "sequencing-data", - "mapping", - "plotting", - "assembly", - "contigs" + "uid": "github/yangao07/TideHunter", + "url": "https://github.com/yangao07/TideHunter", + "rel": "/software/repository/github/yangao07/TideHunter", + "avatar": "https://avatars.githubusercontent.com/u/5309122?v=4", + "description": "TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain", + "topics": [ + "long-reads", + "seed-and-chain", + "multiple-sequence-alignment", + "partial-order-alignment", + "tandem-repeats" ] }, { - "uid": "github/tobiasrausch/lorax", - "url": "https://github.com/tobiasrausch/lorax", - "rel": "/software/repository/github/tobiasrausch/lorax", - "avatar": "https://avatars.githubusercontent.com/u/5946458?v=4", - "description": "A long-read analysis toolbox for cancer genomics", + "uid": "github/yangao07/abPOA", + "url": "https://github.com/yangao07/abPOA", + "rel": "/software/repository/github/yangao07/abPOA", + "avatar": "https://avatars.githubusercontent.com/u/5309122?v=4", + "description": "abPOA: an SIMD-based C library for fast partial order alignment using adaptive band", "topics": [ + "simd", + "partial-order-alignment", + "banded-dp", "long-reads", - "long-read-sequencing", - "cancer-genomics", - "genomics", - "bioinformatics", - "telomere", - "amplicon" + "consensus-sequences", + "multiple-sequence-alignment", + "alignment-graph", + "consensus-sequence", + "gfa-format" ] }, { - "uid": "github/JulianKarlBauer/mechkit", - "url": "https://github.com/JulianKarlBauer/mechkit", - "rel": "/software/repository/github/JulianKarlBauer/mechkit", - "avatar": "https://avatars.githubusercontent.com/u/55383008?v=4", - "description": "Continuum mechanics toolkit", + "uid": "github/openmm/openmm", + "url": "https://github.com/openmm/openmm", + "rel": "/software/repository/github/openmm/openmm", + "avatar": "https://avatars.githubusercontent.com/u/52428936?v=4", + "description": "OpenMM is a toolkit for molecular simulation using high performance GPU code. ", "topics": [ - "mechanics", - "mechanics-of-materials", - "python", - "continuum-mechanics" + "simulation", + "molecular-dynamics" ] }, { - "uid": "github/ImproPhoto/pymicmac", - "url": "https://github.com/ImproPhoto/pymicmac", - "rel": "/software/repository/github/ImproPhoto/pymicmac", - "avatar": "https://avatars3.githubusercontent.com/u/19147158?v=4", - "description": "Python tools for the MicMac FOSS photogrammetric \"suite\"", - "topics": [] - }, - { - "uid": "github/MikeHeiber/Excimontec", - "url": "https://github.com/MikeHeiber/Excimontec", - "rel": "/software/repository/github/MikeHeiber/Excimontec", - "avatar": "https://avatars3.githubusercontent.com/u/7010095?v=4", - "description": "Excimontec is an open-source KMC simulation software package for modeling the optoelectronic processes in organic semiconductor materials and devices, such as OPVs, OLEDs, and more. ", + "uid": "github/jlustigy/coronagraph", + "url": "https://github.com/jlustigy/coronagraph", + "rel": "/software/repository/github/jlustigy/coronagraph", + "avatar": "https://avatars.githubusercontent.com/u/8882466?v=4", + "description": "A Python noise model for directly imaging exoplanets ", "topics": [ - "kinetic-monte-carlo", - "mpi", - "organic-semiconductors" + "exoplanets", + "coronagraph", + "spectroscopy", + "astronomy" ] }, { - "uid": "github/anmolter/XLUR", - "url": "https://github.com/anmolter/XLUR", - "rel": "/software/repository/github/anmolter/XLUR", - "avatar": "https://avatars3.githubusercontent.com/u/34544873?v=4", - "description": "A Python toolbox for ArcGIS Pro that enables the development and application of land use regression models.", + "uid": "github/ulilautenschlager/crimp", + "url": "https://github.com/ulilautenschlager/crimp", + "rel": "/software/repository/github/ulilautenschlager/crimp", + "avatar": "https://avatars.githubusercontent.com/u/58597054?v=4", + "description": "Cluster relabeling based on impurity minimization", "topics": [] }, { - "uid": "github/poldracklab/mriqc", - "url": "https://github.com/nipreps/mriqc", - "rel": "/software/repository/github/poldracklab/mriqc", - "avatar": "https://avatars.githubusercontent.com/u/48300745?v=4", - "description": "Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain", - "topics": [ - "mri", - "quality-control", - "quality-reporter", - "machine-learning", - "neuroimaging" - ] - }, - { - "uid": "github/poldracklab/nitransforms", - "url": "https://github.com/poldracklab/nitransforms", - "rel": "/software/repository/github/poldracklab/nitransforms", - "avatar": "https://avatars.githubusercontent.com/u/9287954?v=4", - "description": "a standalone fork of nipy/nibabel#656", + "uid": "github/monarch-initiative/loinc2hpo", + "url": "https://github.com/monarch-initiative/loinc2hpo", + "rel": "/software/repository/github/monarch-initiative/loinc2hpo", + "avatar": "https://avatars1.githubusercontent.com/u/5161984?v=4", + "description": "Java library to map LOINC-encoded test results to Human Phenotype Ontology", "topics": [] }, { - "uid": "github/miniufo/xinvert", - "url": "https://github.com/miniufo/xinvert", - "rel": "/software/repository/github/miniufo/xinvert", - "avatar": "https://avatars.githubusercontent.com/u/9312831?v=4", - "description": "Invert geophysical fluid dynamic problems (elliptic partial differential equations) using SOR iteration method.", + "uid": "github/tkerscher/blast", + "url": "https://github.com/tkerscher/blast", + "rel": "/software/repository/github/tkerscher/blast", + "avatar": "https://avatars.githubusercontent.com/u/88444139?v=4", + "description": "Synchrotron peak estimator for blazars", "topics": [ - "successive-over-relaxation", - "inversion-problem", - "atmospheric-science", - "oceanography", - "meteorology", - "omega-equation", - "gill-matsuno-model", - "munk-stommel", - "wind-driven-circulation", - "eliassen-model", - "pv-inversion", - "streamfunction", - "velocity-potential", - "geophysical-fluid-dynamics", - "poisson-equation" + "blazar", + "astrophysics" ] }, { - "uid": "github/cwru-pat/cosmograph", - "url": "https://github.com/cwru-pat/cosmograph", - "rel": "/software/repository/github/cwru-pat/cosmograph", - "avatar": "https://avatars.githubusercontent.com/u/10934368?v=4", - "description": "COSMOlogical General Relativity And (Perfect fluid | Particle) Hydrodynamics", - "topics": [] - }, - { - "uid": "github/cwru-pat/cmb-multipole_vectors", - "url": "https://github.com/cwru-pat/cmb-multipole_vectors", - "rel": "/software/repository/github/cwru-pat/cmb-multipole_vectors", - "avatar": "https://avatars.githubusercontent.com/u/10934368?v=4", - "description": "Multipole Vector formalism", + "uid": "github/JGCRI/rfasst", + "url": "https://github.com/JGCRI/rfasst", + "rel": "/software/repository/github/JGCRI/rfasst", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Estimation of a consistent range of adverse health and agricultural effects attributable to air pollution for a GCAM scenario", "topics": [] }, { - "uid": "github/DOnghiaGroup/MGwave", - "url": "https://github.com/DOnghiaGroup/MGwave", - "rel": "/software/repository/github/DOnghiaGroup/MGwave", - "avatar": "https://avatars.githubusercontent.com/u/27309362?v=4", - "description": "Wavelet transformation code to enable detection of kinematic moving groups in astronomical data.", + "uid": "github/JGCRI/stitches", + "url": "https://github.com/JGCRI/stitches", + "rel": "/software/repository/github/JGCRI/stitches", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Amalgamate existing climate data to create monthly climate variable fields.", "topics": [] }, { - "uid": "github/seeh/surprise", - "url": "https://github.com/seeh/surprise", - "rel": "/software/repository/github/seeh/surprise", - "avatar": "https://avatars.githubusercontent.com/u/6814175?v=4", - "description": "Package for estimating relative entropy and Surprise between two posterior samples, assuming they are Gaussian.", + "uid": "github/JGCRI/osiris", + "url": "https://github.com/JGCRI/osiris", + "rel": "/software/repository/github/JGCRI/osiris", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Processes climate impacts on agricultural yields for GCAM", "topics": [] }, { - "uid": "github/openmm/openmm", - "url": "https://github.com/openmm/openmm", - "rel": "/software/repository/github/openmm/openmm", - "avatar": "https://avatars.githubusercontent.com/u/52428936?v=4", - "description": "OpenMM is a toolkit for molecular simulation using high performance GPU code. ", - "topics": [ - "simulation", - "molecular-dynamics" - ] - }, - { - "uid": "github/pinellolab/STREAM", - "url": "https://github.com/pinellolab/STREAM", - "rel": "/software/repository/github/pinellolab/STREAM", - "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", - "description": "STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data", + "uid": "github/JGCRI/tethys", + "url": "https://github.com/JGCRI/tethys", + "rel": "/software/repository/github/JGCRI/tethys", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Spatiotemporal downscaling model for global water use", "topics": [ - "singlecell", - "trajectory", - "lineage", - "visualization", - "scatac-seq", - "scrna-seq", - "python" + "gcims", + "gcam" ] }, { - "uid": "github/pinellolab/CRISPRitz", - "url": "https://github.com/pinellolab/CRISPRitz", - "rel": "/software/repository/github/pinellolab/CRISPRitz", - "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", - "description": "a software package containing 5 different tools dedicated to perform predictive analysis and result assessement on CRISPR/Cas experiments.", - "topics": [] - }, - { - "uid": "github/pinellolab/CRISPResso2", - "url": "https://github.com/pinellolab/CRISPResso2", - "rel": "/software/repository/github/pinellolab/CRISPResso2", - "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", - "description": "Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments", + "uid": "github/JGCRI/ambrosia", + "url": "https://github.com/JGCRI/ambrosia", + "rel": "/software/repository/github/JGCRI/ambrosia", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "An R package for calculating and analyzing food demand and in accordance with the Edmonds et al food demand model", "topics": [ - "genome-editing", - "quantification", - "amplicon-sequences" + "economics", + "food-security", + "scientific-computing" ] }, { - "uid": "github/stefanradev93/BayesFlow", - "url": "https://github.com/stefanradev93/BayesFlow", - "rel": "/software/repository/github/stefanradev93/BayesFlow", - "avatar": "https://avatars.githubusercontent.com/u/22372377?v=4", - "description": "A Python library for amortized Bayesian workflows using generative neural networks.", + "uid": "github/JGCRI/rmap", + "url": "https://github.com/JGCRI/rmap", + "rel": "/software/repository/github/JGCRI/rmap", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Mapping software with pre-loaded global and local maps", "topics": [ - "bayesian-inference", - "deep-learning", - "model-comparison", - "amortized-inference", - "simulation-based", - "invertible-networks", - "parameter-estimation", - "likelihood-free", - "uncertainty-quantification" + "mapping", + "maps" ] }, { - "uid": "github/cire-thk/BifacialSimu", - "url": "https://github.com/cire-thk/BifacialSimu", - "rel": "/software/repository/github/cire-thk/BifacialSimu", - "avatar": "https://avatars.githubusercontent.com/u/60656081?v=4", - "description": "Simulation of bifacial PV", + "uid": "github/JGCRI/plutus", + "url": "https://github.com/JGCRI/plutus", + "rel": "/software/repository/github/JGCRI/plutus", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": null, "topics": [] }, { - "uid": "github/lazear/sage", - "url": "https://github.com/lazear/sage", - "rel": "/software/repository/github/lazear/sage", - "avatar": "https://avatars.githubusercontent.com/u/14057244?v=4", - "description": "Proteomics search & quantification so fast that it feels like magic", - "topics": [ - "bioinformatics", - "proteomics", - "mass-spectrometry" - ] + "uid": "github/JGCRI/gcamfaostat", + "url": "https://github.com/JGCRI/gcamfaostat", + "rel": "/software/repository/github/JGCRI/gcamfaostat", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "An R package to prepare, process, and synthesize FAOSTAT data for global agroeconomic and multisector dynamic modeling", + "topics": [] }, { - "uid": "github/ElsevierSoftwareX/SOFTX_2020_119", - "url": "https://github.com/ElsevierSoftwareX/SOFTX_2020_119", - "rel": "/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", - "avatar": "https://avatars.githubusercontent.com/u/10198119?v=4", - "description": "Python/Octave wrapper generation for LALSuite", + "uid": "github/JGCRI/HELPS", + "url": "https://github.com/JGCRI/HELPS", + "rel": "/software/repository/github/JGCRI/HELPS", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "Explore future Heat Effects on Labor Productivity by Sector", "topics": [] }, { - "uid": "github/RichardPIII/Cumulative-Time-Dilation", - "url": "https://github.com/RichardPIII/Cumulative-Time-Dilation", - "rel": "/software/repository/github/RichardPIII/Cumulative-Time-Dilation", - "avatar": "https://avatars.githubusercontent.com/u/197427316?v=4", - "description": null, + "uid": "github/JGCRI/gaia", + "url": "https://github.com/JGCRI/gaia", + "rel": "/software/repository/github/JGCRI/gaia", + "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", + "description": "gaia is an empirical econometric model designed to estimate annual crop yield responses to climate impacts.", "topics": [] }, { - "uid": "github/SPARTA-dev/SPARTA", - "url": "https://github.com/SPARTA-dev/SPARTA", - "rel": "/software/repository/github/SPARTA-dev/SPARTA", - "avatar": "https://avatars.githubusercontent.com/u/63186054?v=4", + "uid": "github/thom991/MSIQuickView", + "url": "https://github.com/thom991/MSIQuickView", + "rel": "/software/repository/github/thom991/MSIQuickView", + "avatar": "https://avatars.githubusercontent.com/u/10854661?v=4", "description": null, "topics": [] }, { - "uid": "github/PaulMcMillan-Astro/Torus", - "url": "https://github.com/PaulMcMillan-Astro/Torus", - "rel": "/software/repository/github/PaulMcMillan-Astro/Torus", - "avatar": "https://avatars.githubusercontent.com/u/5293931?v=4", - "description": "Torus Code", - "topics": [] + "uid": "github/sunpy/sunpy", + "url": "https://github.com/sunpy/sunpy", + "rel": "/software/repository/github/sunpy/sunpy", + "avatar": "https://avatars0.githubusercontent.com/u/963197?v=4", + "description": "SunPy - Python for Solar Physics", + "topics": [ + "sunpy", + "python", + "astronomy", + "solar", + "astropy", + "solar-physics", + "sun" + ] }, { - "uid": "github/PaulMcMillan-Astro/GalPot", - "url": "https://github.com/PaulMcMillan-Astro/GalPot", - "rel": "/software/repository/github/PaulMcMillan-Astro/GalPot", - "avatar": "https://avatars.githubusercontent.com/u/5293931?v=4", - "description": "A stand-alone version of Dehnen's GalaxyPotential code.", - "topics": [] + "uid": "github/sunpy/ndcube", + "url": "https://github.com/sunpy/ndcube", + "rel": "/software/repository/github/sunpy/ndcube", + "avatar": "https://avatars.githubusercontent.com/u/963197?v=4", + "description": "A base package for multi-dimensional contiguous and non-contiguous coordinate-aware arrays. Maintainers: @danryanirish & @Cadair", + "topics": [ + "sunpy", + "nddata", + "wcs", + "numfocus", + "astropy" + ] }, { "uid": "github/nbellomo/Multi_CLASS", @@ -17481,599 +16903,750 @@ "topics": [] }, { - "uid": "github/biobakery/halla", - "url": "https://github.com/biobakery/halla", - "rel": "/software/repository/github/biobakery/halla", - "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", - "description": null, + "uid": "github/aakepley/autobox", + "url": "https://github.com/aakepley/autobox", + "rel": "/software/repository/github/aakepley/autobox", + "avatar": "https://avatars.githubusercontent.com/u/2965853?v=4", + "description": "Prototype of an autoboxing routine for tclean", "topics": [] }, { - "uid": "github/biobakery/MetaPhlAn", - "url": "https://github.com/biobakery/MetaPhlAn", - "rel": "/software/repository/github/biobakery/MetaPhlAn", - "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", - "description": "MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data", - "topics": [ - "public", - "tools", - "biobakery", - "python", - "metagenomics" - ] + "uid": "github/frescigno/magpy_rv", + "url": "https://github.com/frescigno/magpy_rv", + "rel": "/software/repository/github/frescigno/magpy_rv", + "avatar": "https://avatars.githubusercontent.com/u/80278728?v=4", + "description": "Modelling Activity with Gaussian process regression in Python", + "topics": [] }, { - "uid": "github/biobakery/phylophlan", - "url": "https://github.com/biobakery/phylophlan", - "rel": "/software/repository/github/biobakery/phylophlan", - "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", - "description": "Precise phylogenetic analysis of microbial isolates and genomes from metagenomes", - "topics": [ - "python", - "tools", - "biobakery", - "phylogenetic-trees" - ] + "uid": "github/timothygebhard/ml4ptp", + "url": "https://github.com/timothygebhard/ml4ptp", + "rel": "/software/repository/github/timothygebhard/ml4ptp", + "avatar": "https://avatars.githubusercontent.com/u/10123688?v=4", + "description": "Machine learning for PT profiles of exoplanet atmospheres \ud83e\ude90", + "topics": [] }, { - "uid": "github/eas342/tshirt", - "url": "https://github.com/eas342/tshirt", - "rel": "/software/repository/github/eas342/tshirt", - "avatar": "https://avatars.githubusercontent.com/u/234377?v=4", - "description": "Tools for time series", + "uid": "github/timothygebhard/fm4ar", + "url": "https://github.com/timothygebhard/fm4ar", + "rel": "/software/repository/github/timothygebhard/fm4ar", + "avatar": "https://avatars.githubusercontent.com/u/10123688?v=4", + "description": "Flow matching for atmospheric retrievals", "topics": [] }, { - "uid": "github/tonhingm/PHOTOe-v1", - "url": "https://github.com/tonhingm/PHOTOe-v1", - "rel": "/software/repository/github/tonhingm/PHOTOe-v1", - "avatar": "https://avatars.githubusercontent.com/u/120097310?v=4", - "description": null, + "uid": "github/tholoien/empiriciSN", + "url": "https://github.com/tholoien/empiriciSN", + "rel": "/software/repository/github/tholoien/empiriciSN", + "avatar": "https://avatars.githubusercontent.com/u/19830410?v=4", + "description": "Generate realistic parameters for a SN given host galaxy observations based on empirical correlations from SN datasets", "topics": [] }, { - "uid": "github/MichaelDAlbrow/CMDFitter", - "url": "https://github.com/MichaelDAlbrow/CMDFitter", - "rel": "/software/repository/github/MichaelDAlbrow/CMDFitter", - "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", - "description": "Fit a probabilistic generative model to a colour-magnitude diagram.", + "uid": "github/tholoien/XDGMM", + "url": "https://github.com/tholoien/XDGMM", + "rel": "/software/repository/github/tholoien/XDGMM", + "avatar": "https://avatars.githubusercontent.com/u/19830410?v=4", + "description": "A wrapper class for the scikit-learn BaseEstimator class that implements both the astroML and Bovy et al. (2011) XDGMM methods.", "topics": [] }, { - "uid": "github/MichaelDAlbrow/pyDIA", - "url": "https://github.com/MichaelDAlbrow/pyDIA", - "rel": "/software/repository/github/MichaelDAlbrow/pyDIA", - "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", - "description": "pyDIA is a modular python package for performing star detection, difference imaging and photometry on astronomical images.", + "uid": "github/alerpaschoal/CODARFE", + "url": "https://github.com/alerpaschoal/CODARFE", + "rel": "/software/repository/github/alerpaschoal/CODARFE", + "avatar": "https://avatars.githubusercontent.com/u/38994165?v=4", + "description": null, "topics": [] }, { - "uid": "github/MichaelDAlbrow/Dazzle", - "url": "https://github.com/MichaelDAlbrow/Dazzle", - "rel": "/software/repository/github/MichaelDAlbrow/Dazzle", - "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", - "description": null, + "uid": "github/GeomScale/volesti", + "url": "https://github.com/GeomScale/volesti", + "rel": "/software/repository/github/GeomScale/volesti", + "avatar": "https://avatars.githubusercontent.com/u/46485370?v=4", + "description": "Practical volume computation and sampling in high dimensions", + "topics": [ + "geometry", + "statistics", + "polyhedral-computations", + "random-walk", + "sampling", + "volume", + "hit-and-run", + "polytope", + "cran", + "finance", + "monte-carlo", + "scientific-computing" + ] + }, + { + "uid": "github/ysekig/GPMsDB-tk", + "url": "https://github.com/ysekig/GPMsDB-tk", + "rel": "/software/repository/github/ysekig/GPMsDB-tk", + "avatar": "https://avatars.githubusercontent.com/u/120002055?v=4", + "description": "Genomically predicted protein mass database (GPMsDB) toolkits for assigning taxonomic identification of bacterial and archaeal cells with user-provided MALDI-TOF mass spectrometry profiles", "topics": [] }, { - "uid": "github/JulianBMunoz/RelicFast", - "url": "https://github.com/JulianBMunoz/RelicFast", - "rel": "/software/repository/github/JulianBMunoz/RelicFast", - "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", - "description": "Code to find scale-dependent halo bias quickly and accurately", + "uid": "github/ysekig/GPMsDB-dbtk", + "url": "https://github.com/ysekig/GPMsDB-dbtk", + "rel": "/software/repository/github/ysekig/GPMsDB-dbtk", + "avatar": "https://avatars.githubusercontent.com/u/120002055?v=4", + "description": "toolkits for GPMsDB-tk to modify its database with user-provided bacterial and archaeal genome/metagenome-assembled genome (MAG) sequences", "topics": [] }, { - "uid": "github/JulianBMunoz/Zeus21", - "url": "https://github.com/JulianBMunoz/Zeus21", - "rel": "/software/repository/github/JulianBMunoz/Zeus21", - "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", - "description": "Zeus21: Lightning-fast simulations of cosmic dawn", + "uid": "github/ci-for-research/self-hosted-runners", + "url": "https://github.com/ci-for-research/self-hosted-runners", + "rel": "/software/repository/github/ci-for-research/self-hosted-runners", + "avatar": "https://avatars3.githubusercontent.com/u/67105980?v=4", + "description": "Recipe to install and configure a GitHub action runner using Ansible", "topics": [ - "21-cm", - "21-cm-cosmology", - "21-cm-powerspectrum", - "cosmic-dawn", - "cosmology", - "cosmology-inference", - "galaxy-evolution", - "reionization", - "hst", - "jwst", - "luminosity-function" + "continuous-integration", + "github-actions" ] }, { - "uid": "github/JulianBMunoz/21cmvFAST", - "url": "https://github.com/JulianBMunoz/21cmvFAST", - "rel": "/software/repository/github/JulianBMunoz/21cmvFAST", - "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", - "description": "Modified version of 21cmFAST including dark matter-baryon relative velocities.", + "uid": "github/asgr/NFWdist", + "url": "https://github.com/asgr/NFWdist", + "rel": "/software/repository/github/asgr/NFWdist", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "Density, distribution function, quantile function and random generation for the 3D NFW profile", "topics": [] }, { - "uid": "github/fdebras/ECLIPS3D", - "url": "https://github.com/fdebras/ECLIPS3D", - "rel": "/software/repository/github/fdebras/ECLIPS3D", - "avatar": "https://avatars.githubusercontent.com/u/49026312?v=4", - "description": "Public code for linear wave and circulation calculations, developed originally for planetary atmospheres.", + "uid": "github/asgr/ProFuse", + "url": "https://github.com/asgr/ProFuse", + "rel": "/software/repository/github/asgr/ProFuse", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "ProFound + ProFit + ProSpect = ProFuse", "topics": [] }, { - "uid": "github/kundajelab/phantompeakqualtools", - "url": "https://github.com/kundajelab/phantompeakqualtools", - "rel": "/software/repository/github/kundajelab/phantompeakqualtools", - "avatar": "https://avatars.githubusercontent.com/u/7598085?v=4", - "description": "This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.", + "uid": "github/asgr/Rwcs", + "url": "https://github.com/asgr/Rwcs", + "rel": "/software/repository/github/asgr/Rwcs", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "Interface to C wcslib", "topics": [] }, { - "uid": "github/chihchunhsu/smart", - "url": "https://github.com/chihchunhsu/smart", - "rel": "/software/repository/github/chihchunhsu/smart", - "avatar": "https://avatars.githubusercontent.com/u/22515968?v=4", - "description": "Spectral Modeling Analysis and RV Tool", + "uid": "github/asgr/ProSpect", + "url": "https://github.com/asgr/ProSpect", + "rel": "/software/repository/github/asgr/ProSpect", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "Spectral Generation Package", "topics": [] }, { - "uid": "github/wokast/RePrimAnd", - "url": "https://github.com/wokast/RePrimAnd", - "rel": "/software/repository/github/wokast/RePrimAnd", - "avatar": "https://avatars.githubusercontent.com/u/28341738?v=4", - "description": "Support library providing EOS and primitive recovery framework for general relativistic ideal MHD", + "uid": "github/asgr/ProFound", + "url": "https://github.com/asgr/ProFound", + "rel": "/software/repository/github/asgr/ProFound", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "ProFound source finding and extraction", "topics": [] }, { - "uid": "github/wokast/PyCactus", - "url": "https://github.com/wokast/PyCactus", - "rel": "/software/repository/github/wokast/PyCactus", - "avatar": "https://avatars.githubusercontent.com/u/28341738?v=4", - "description": "Python packages for post-processing Cactus computational toolkit simulation data", + "uid": "github/asgr/hyper.fit", + "url": "https://github.com/asgr/hyper.fit", + "rel": "/software/repository/github/asgr/hyper.fit", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "The hyper.fit hyperplane fitting package.", "topics": [] }, { - "uid": "github/jakelangham/kestrel", - "url": "https://github.com/jakelangham/kestrel", - "rel": "/software/repository/github/jakelangham/kestrel", - "avatar": "https://avatars.githubusercontent.com/u/46025329?v=4", - "description": "Software for simulations of sediment-laden Earth surface flows", - "topics": [ - "debris-flow", - "fluid-simulation", - "geophysical-fluid-dynamics", - "granular-flow", - "morphodynamics", - "natural-hazards-modelling", - "shallow-water-equations" - ] + "uid": "github/asgr/celestial", + "url": "https://github.com/asgr/celestial", + "rel": "/software/repository/github/asgr/celestial", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "celestial R package", + "topics": [] }, { - "uid": "github/insilicomedicine/GENTRL", - "url": "https://github.com/insilicomedicine/GENTRL", - "rel": "/software/repository/github/insilicomedicine/GENTRL", - "avatar": "https://avatars.githubusercontent.com/u/47208953?v=4", - "description": "Generative Tensorial Reinforcement Learning (GENTRL) model", + "uid": "github/asgr/ProPane", + "url": "https://github.com/asgr/ProPane", + "rel": "/software/repository/github/asgr/ProPane", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "Package of stacking related functions, replacing older Rwcs and ProFound related functions.", "topics": [] }, { - "uid": "github/scikit-image/scikit-image", - "url": "https://github.com/scikit-image/scikit-image", - "rel": "/software/repository/github/scikit-image/scikit-image", - "avatar": "https://avatars0.githubusercontent.com/u/897180?v=4", - "description": "Image processing in Python", + "uid": "github/asgr/Rfits", + "url": "https://github.com/asgr/Rfits", + "rel": "/software/repository/github/asgr/Rfits", + "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", + "description": "Rfits stuff", + "topics": [] + }, + { + "uid": "github/SHTOOLS/SHTOOLS", + "url": "https://github.com/SHTOOLS/SHTOOLS", + "rel": "/software/repository/github/SHTOOLS/SHTOOLS", + "avatar": "https://avatars.githubusercontent.com/u/8998566?v=4", + "description": "SHTOOLS - Spherical Harmonic Tools", "topics": [ - "image-processing", + "spherical-harmonics", + "spectral-analysis", "python", - "computer-vision" + "fortran", + "gravity-field", + "magnetic-field", + "topography", + "slepian-functions" ] }, { - "uid": "github/JustinYKC/FEPOPS", - "url": "https://github.com/JustinYKC/FEPOPS", - "rel": "/software/repository/github/JustinYKC/FEPOPS", - "avatar": "https://avatars.githubusercontent.com/u/50987508?v=4", - "description": "Python implementation of the FEPOPS molecular descriptors", + "uid": "github/gacou54/pyorthanc", + "url": "https://github.com/gacou54/pyorthanc", + "rel": "/software/repository/github/gacou54/pyorthanc", + "avatar": "https://avatars.githubusercontent.com/u/25424166?v=4", + "description": "Python library that wrap the Orthanc REST API and facilitate the manipulation of data in Orthanc", "topics": [] }, { - "uid": "github/wilkelab/Opfi", - "url": "https://github.com/wilkelab/Opfi", - "rel": "/software/repository/github/wilkelab/Opfi", - "avatar": "https://avatars.githubusercontent.com/u/7905759?v=4", - "description": "A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.", + "uid": "github/i-VRESSE/workflow-builder", + "url": "https://github.com/i-VRESSE/workflow-builder", + "rel": "/software/repository/github/i-VRESSE/workflow-builder", + "avatar": "https://avatars.githubusercontent.com/u/93722891?v=4", + "description": "Graphical interface to build a workflow file", "topics": [] }, { - "uid": "github/thiago-glissoi/FFF-Line-Segmentation", - "url": "https://github.com/thiago-glissoi/FFF-Line-Segmentation", - "rel": "/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", - "avatar": "https://avatars.githubusercontent.com/u/127967382?v=4", - "description": "The fff_segmenter algorithm is used to segment an acoustic signal obtained from a first layer 3D print into multiple acoustic blocks related to specific geometrical elements of the printed part, such as contour lines, raster lines, and transition between raster lines.", + "uid": "github/i-VRESSE/pdbtbx-ts", + "url": "https://github.com/i-VRESSE/pdbtbx-ts", + "rel": "/software/repository/github/i-VRESSE/pdbtbx-ts", + "avatar": "https://avatars.githubusercontent.com/u/93722891?v=4", + "description": "JS wrapper around pdbtbx rust crate", "topics": [] }, { - "uid": "github/pavanvyn/triple-stability", - "url": "https://github.com/pavanvyn/triple-stability", - "rel": "/software/repository/github/pavanvyn/triple-stability", - "avatar": "https://avatars.githubusercontent.com/u/16152500?v=4", - "description": "Code to check if a given configuration of a triple-star system is dynamically stable", + "uid": "github/low-sky/cprops", + "url": "https://github.com/low-sky/cprops", + "rel": "/software/repository/github/low-sky/cprops", + "avatar": "https://avatars.githubusercontent.com/u/1139910?v=4", + "description": "Rosolowsky and Leroy (2006) Algorithm", "topics": [] }, { - "uid": "github/statistical-thinking/KI.ENNA", - "url": "https://github.com/statistical-thinking/KI.ENNA", - "rel": "/software/repository/github/statistical-thinking/KI.ENNA", - "avatar": "https://avatars.githubusercontent.com/u/20285492?v=4", - "description": "KI-ENNA: (E)in (N)euronales (N)etz zum (A)usprobieren / AI-ANNE: (A) (N)eural (N)et for (E)xploration", - "topics": [] + "uid": "github/Alcampopiano/hypothesize", + "url": "https://github.com/Alcampopiano/hypothesize", + "rel": "/software/repository/github/Alcampopiano/hypothesize", + "avatar": "https://avatars1.githubusercontent.com/u/4624246?v=4", + "description": "Robust statistics in Python", + "topics": [ + "statistics", + "robust-statistics", + "python", + "r", + "hypothesis-testing", + "data-analysis", + "stats", + "null-hypothesis", + "confidence-intervals", + "significance-testing" + ] }, { - "uid": "github/BioGenies/AMPBenchmark", - "url": "https://github.com/BioGenies/AMPBenchmark", - "rel": "/software/repository/github/BioGenies/AMPBenchmark", - "avatar": "https://avatars.githubusercontent.com/u/70942725?v=4", + "uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", + "url": "https://github.com/DebduttaPaul/luminosity_function_of_lGRBs", + "rel": "/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", + "avatar": "https://avatars.githubusercontent.com/u/20395873?v=4", "description": null, "topics": [] }, { - "uid": "github/ggobi/ggobi", - "url": "https://github.com/ggobi/ggobi", - "rel": "/software/repository/github/ggobi/ggobi", - "avatar": "https://avatars.githubusercontent.com/u/423638?v=4", - "description": "High dimensional data vis", + "uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", + "url": "https://github.com/DebduttaPaul/luminosity_function_of_sGRBs", + "rel": "/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", + "avatar": "https://avatars.githubusercontent.com/u/20395873?v=4", + "description": "This is a repository containing databases and scripts for short GRB luminosity function work.", "topics": [] }, { - "uid": "github/bcgsc/ntHash", - "url": "https://github.com/bcgsc/ntHash", - "rel": "/software/repository/github/bcgsc/ntHash", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Fast hash function for DNA sequences", + "uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", + "url": "https://github.com/AlphonsG/Rainbow-Optical-Flow-For-ALI", + "rel": "/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", + "avatar": "https://avatars.githubusercontent.com/u/45003643?v=4", + "description": "Repository for software detailed in 'Rainbow: Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow' software paper. See Readme for more details.", "topics": [ - "hash-methods", - "hash-algorithm", - "k-mer-hashing", - "genomics", + "deep-learning", + "biology", + "image-analysis", "bioinformatics", - "hash", - "bloom-filter" + "optical-flow", + "python", + "pytorch" ] }, { - "uid": "github/bcgsc/goldrush", - "url": "https://github.com/bcgsc/goldrush", - "rel": "/software/repository/github/bcgsc/goldrush", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Linear-time de novo Long Read Assembler", + "uid": "github/scotthgn/AGNvar", + "url": "https://github.com/scotthgn/AGNvar", + "rel": "/software/repository/github/scotthgn/AGNvar", + "avatar": "https://avatars.githubusercontent.com/u/99818820?v=4", + "description": "Python code for modelling spectral timing properties in AGN. Performs calculations of fully time-dependent SEDs following an input variable X-ray light-curve (See Hagen & Done (2023a)", "topics": [ - "bioinformatics", - "bioinformatics-tool", - "genome-assembly", - "long-read-sequencing" + "agn", + "astrophysics" ] }, { - "uid": "github/bcgsc/TMBur", - "url": "https://github.com/bcgsc/TMBur", - "rel": "/software/repository/github/bcgsc/TMBur", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Derive TMB estimates from whole genome fastq files. Runs alignment and variant calling before reporting a variety of TMB estimates", + "uid": "github/scotthgn/relagn", + "url": "https://github.com/scotthgn/RELAGN", + "rel": "/software/repository/github/scotthgn/relagn", + "avatar": "https://avatars.githubusercontent.com/u/99818820?v=4", + "description": "AGN SED model based off AGNSED (Kubota & Done 2018), but taking into account full GR ray tracing. These relativistic correction are calculated by doing the convolution with the relativistic transfer code KYCONV (Dovciak, Karas & Yaqoob 2004) at each radial annulus", + "topics": [ + "astronomy", + "astrophysics", + "black-holes", + "relativity", + "spectral-analysis", + "spectral-modelling" + ] + }, + { + "uid": "github/t-brandt/orvara", + "url": "https://github.com/t-brandt/orvara", + "rel": "/software/repository/github/t-brandt/orvara", + "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", + "description": null, "topics": [] }, { - "uid": "github/bcgsc/longstitch", - "url": "https://github.com/bcgsc/LongStitch", - "rel": "/software/repository/github/bcgsc/longstitch", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Correct and scaffold assemblies using long reads", + "uid": "github/t-brandt/acorns-adi", + "url": "https://github.com/t-brandt/acorns-adi", + "rel": "/software/repository/github/t-brandt/acorns-adi", + "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", + "description": "A software package to reduce angular differential imaging data from Subaru/HiCIAO", "topics": [] }, { - "uid": "github/bcgsc/ntCard", - "url": "https://github.com/bcgsc/ntCard", - "rel": "/software/repository/github/bcgsc/ntCard", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Estimating k-mer coverage histogram of genomics data", - "topics": [ - "cardinality-estimation", - "k-mer-counting", - "k-mer-frequency", - "hyperloglog", - "streaming-algorithms" - ] + "uid": "github/t-brandt/fitramp", + "url": "https://github.com/t-brandt/fitramp", + "rel": "/software/repository/github/t-brandt/fitramp", + "avatar": "https://avatars.githubusercontent.com/u/2295093?v=4", + "description": "Fit a ramp to a series of nondestructive reads, detect and reject jumps.", + "topics": [] }, { - "uid": "github/bcgsc/NanoSim", - "url": "https://github.com/bcgsc/NanoSim", - "rel": "/software/repository/github/bcgsc/NanoSim", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Nanopore sequence read simulator", + "uid": "github/hmtabernero/SteParSyn", + "url": "https://github.com/hmtabernero/SteParSyn", + "rel": "/software/repository/github/hmtabernero/SteParSyn", + "avatar": "https://avatars.githubusercontent.com/u/46009226?v=4", + "description": "SteParSyn is an automatic code used to infer stellar atmospheric parameters using the spectral synthesis method. ", "topics": [ - "genome", - "transcriptome", - "simulator", - "oxford-nanopore", - "nanopore-sequencing" + "stellar-parameters", + "stellar-atmospheres", + "stellar-astrophysics" ] }, { - "uid": "github/bcgsc/arcs", - "url": "https://github.com/bcgsc/arcs", - "rel": "/software/repository/github/bcgsc/arcs", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "\ud83c\udf08Scaffold genome sequence assemblies using linked read sequencing data", + "uid": "github/NMBU-Data-Science/RENT", + "url": "https://github.com/NMBU-Data-Science/RENT", + "rel": "/software/repository/github/NMBU-Data-Science/RENT", + "avatar": "https://avatars.githubusercontent.com/u/60933198?v=4", + "description": "Feature selection method based on repeated elastic net.", "topics": [ - "c-plus-plus", - "science", - "bioinformatics", - "assembler", - "scaffold", - "genome", - "10xgenomics", - "graph" + "feature-selection", + "elastic-net", + "ensemble-model", + "binary-classification", + "regression", + "ensemble", + "classification" ] }, { - "uid": "github/bcgsc/btllib", - "url": "https://github.com/bcgsc/btllib", - "rel": "/software/repository/github/bcgsc/btllib", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "Bioinformatics Technology Lab common code library", + "uid": "github/krober10nd/SeismicMesh", + "url": "https://github.com/krober10nd/SeismicMesh", + "rel": "/software/repository/github/krober10nd/SeismicMesh", + "avatar": "https://avatars.githubusercontent.com/u/18619644?v=4", + "description": "2D/3D serial and parallel triangular mesh generation tool for Finite Element Methods.", "topics": [ - "bioinformatics", - "genome", - "library", - "cpp", - "python", - "bloom-filter", - "algorithms", - "data-structures" + "meshing", + "seismic-velocity-models", + "parallel", + "distmesh" ] }, { - "uid": "github/bcgsc/abyss", - "url": "https://github.com/bcgsc/abyss", - "rel": "/software/repository/github/bcgsc/abyss", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": ":microscope: Assemble large genomes using short reads", + "uid": "github/ldliao/jointVIP", + "url": "https://github.com/ldliao/jointVIP", + "rel": "/software/repository/github/ldliao/jointVIP", + "avatar": "https://avatars.githubusercontent.com/u/22989630?v=4", + "description": "Prioritize variables in observational study design through the joint variable importance plot; shiny app: https://ldliao.shinyapps.io/jointVIP/", "topics": [ - "bloom-filter", - "c-plus-plus", - "science", - "bioinformatics", - "assembler", - "scaffold", - "genome", - "openmp", - "mpi" + "causal-inference", + "observational-study", + "study-design", + "rstats", + "r" ] }, { - "uid": "github/bcgsc/tigmint", - "url": "https://github.com/bcgsc/tigmint", - "rel": "/software/repository/github/bcgsc/tigmint", - "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", - "description": "\u26d3 Correct misassemblies using linked AND long reads", - "topics": [ - "misassembly-correction", - "genome-scaffolding", - "genome-assembly", - "linked-reads", - "10xgenomics", - "bioinformatics", - "bioinformatics-tool" - ] + "uid": "github/netrias/rnassist", + "url": "https://github.com/netrias/rnassist", + "rel": "/software/repository/github/netrias/rnassist", + "avatar": "https://avatars.githubusercontent.com/u/31782484?v=4", + "description": null, + "topics": [] }, { - "uid": "github/YangLab/RNAlight", - "url": "https://github.com/YangLab/RNAlight", - "rel": "/software/repository/github/YangLab/RNAlight", - "avatar": "https://avatars.githubusercontent.com/u/7710533?v=4", - "description": "a machine learning model to identify nucleotide features determining RNA subcellular localization", + "uid": "github/timstaley/amisurvey", + "url": "https://github.com/timstaley/amisurvey", + "rel": "/software/repository/github/timstaley/amisurvey", + "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", + "description": "End-to-end calibration and imaging of AMI-LA data.", "topics": [] }, { - "uid": "github/YangLab/CIRCexplorer2", - "url": "https://github.com/YangLab/CIRCexplorer2", - "rel": "/software/repository/github/YangLab/CIRCexplorer2", - "avatar": "https://avatars.githubusercontent.com/u/7710533?v=4", - "description": "a comprehensive and integrative circular RNA analysis toolset.", + "uid": "github/timstaley/voevent-parse", + "url": "https://github.com/timstaley/voevent-parse", + "rel": "/software/repository/github/timstaley/voevent-parse", + "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", + "description": "VOEvent parsing and manipulation routines built on lxml.objectify.", "topics": [ - "circrna" + "python", + "astronomy", + "xml-parsing", + "voevent" ] }, { - "uid": "github/schlafly/crowdsource", - "url": "https://github.com/schlafly/crowdsource", - "rel": "/software/repository/github/schlafly/crowdsource", - "avatar": "https://avatars.githubusercontent.com/u/1417841?v=4", - "description": "Crowded field photometry pipeline", + "uid": "github/timstaley/chimenea", + "url": "https://github.com/timstaley/chimenea", + "rel": "/software/repository/github/timstaley/chimenea", + "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", + "description": "Automated image-synthesis of multi-epoch radio-telescope data.", "topics": [] }, { - "uid": "github/ToHanwei/Genome2OR", - "url": "https://github.com/ToHanwei/Genome2OR", - "rel": "/software/repository/github/ToHanwei/Genome2OR", - "avatar": "https://avatars.githubusercontent.com/u/34996314?v=4", - "description": "Annotate Olfactory receptor CDS from genome", + "uid": "github/LMJL-Alea/ktest", + "url": "https://github.com/LMJL-Alea/ktest", + "rel": "/software/repository/github/LMJL-Alea/ktest", + "avatar": "https://avatars.githubusercontent.com/u/85163893?v=4", + "description": null, "topics": [] }, { - "uid": "github/CRG-CNAG/anubis", - "url": "https://github.com/CRG-CNAG/anubis", - "rel": "/software/repository/github/CRG-CNAG/anubis", - "avatar": "https://avatars.githubusercontent.com/u/16474917?v=4", - "description": "Python package for the analysis of tn-seq data", + "uid": "github/kavonrtep/dante", + "url": "https://github.com/kavonrtep/dante", + "rel": "/software/repository/github/kavonrtep/dante", + "avatar": "https://avatars2.githubusercontent.com/u/8256626?v=4", + "description": "Domain based annotation of transposable elements ", "topics": [] }, { - "uid": "github/AFD-Illinois/ebhlight", - "url": "https://github.com/AFD-Illinois/ebhlight", - "rel": "/software/repository/github/AFD-Illinois/ebhlight", - "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", - "description": "Two-temperature General Relativistic Radiation Magnetohydrodynamics", + "uid": "github/atchekho/harmpi", + "url": "https://github.com/atchekho/harmpi", + "rel": "/software/repository/github/atchekho/harmpi", + "avatar": "https://avatars.githubusercontent.com/u/8141298?v=4", + "description": "3D massively parallel general relativictic MHD code HARMPI", "topics": [] }, { - "uid": "github/AFD-Illinois/iharm3d", - "url": "https://github.com/AFD-Illinois/iharm3d", - "rel": "/software/repository/github/AFD-Illinois/iharm3d", - "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", - "description": "Hybrid MPI/OpenMP 3D HARM with vectorization", + "uid": "github/drzeeshanahmed/JWES-Visual", + "url": "https://github.com/drzeeshanahmed/JWES-Visual", + "rel": "/software/repository/github/drzeeshanahmed/JWES-Visual", + "avatar": "https://avatars.githubusercontent.com/u/16215126?v=4", + "description": null, "topics": [] }, { - "uid": "github/ajeldorado/falco-matlab", - "url": "https://github.com/ajeldorado/falco-matlab", - "rel": "/software/repository/github/ajeldorado/falco-matlab", - "avatar": "https://avatars.githubusercontent.com/u/7228719?v=4", - "description": "Fast Linearized Coronagraph Optimizer (FALCO) in MATLAB", + "uid": "github/qutip/qutip", + "url": "https://github.com/qutip/qutip", + "rel": "/software/repository/github/qutip/qutip", + "avatar": "https://avatars0.githubusercontent.com/u/2517630?v=4", + "description": "QuTiP: Quantum Toolbox in Python", + "topics": [ + "qutip", + "python", + "quantum-toolbox", + "quantum", + "quantum-computing", + "quantum-mechanics", + "quantum-information", + "quantum-optics" + ] + }, + { + "uid": "github/cassidymwagner/fluidsf", + "url": "https://github.com/cassidymwagner/fluidsf", + "rel": "/software/repository/github/cassidymwagner/fluidsf", + "avatar": "https://avatars.githubusercontent.com/u/18169742?v=4", + "description": "FluidSF is a package used to calculate structure functions from fluid data.", "topics": [] }, { - "uid": "github/ajeldorado/falco-python", - "url": "https://github.com/ajeldorado/falco-python", - "rel": "/software/repository/github/ajeldorado/falco-python", - "avatar": "https://avatars.githubusercontent.com/u/7228719?v=4", - "description": "Fast Linearized Coronagraph Optimizer (FALCO) in Python 3", + "uid": "github/GabrieleParimbelli/COLIBRI", + "url": "https://github.com/GabrieleParimbelli/COLIBRI", + "rel": "/software/repository/github/GabrieleParimbelli/COLIBRI", + "avatar": "https://avatars.githubusercontent.com/u/43963112?v=4", + "description": "Cosmology libraries in Python", "topics": [] }, { - "uid": "github/0x0f0f0f/Metatheory.jl", - "url": "https://github.com/0x0f0f0f/Metatheory.jl", - "rel": "/software/repository/github/0x0f0f0f/Metatheory.jl", - "avatar": "https://avatars.githubusercontent.com/u/17289614?v=4", - "description": "General purpose metaprogramming and algebraic computation library for the Julia programming language", - "topics": [ - "julia", - "symbolic", - "symbolic-computation", - "algebraic", - "cas", - "metatheory", - "programming-language", - "optimization", - "compiler-optimization", - "compiler-construction" - ] + "uid": "github/msailer1234/JWST_Simulation", + "url": "https://github.com/msailer1234/JWST_Simulation", + "rel": "/software/repository/github/msailer1234/JWST_Simulation", + "avatar": "https://avatars.githubusercontent.com/u/91031900?v=4", + "description": null, + "topics": [] }, { - "uid": "github/fraserw/TRIPPy", - "url": "https://github.com/fraserw/trippy", - "rel": "/software/repository/github/fraserw/TRIPPy", - "avatar": "https://avatars.githubusercontent.com/u/6462654?v=4", - "description": "Python based Trailed Source Photometry", + "uid": "github/siriobelli/flame", + "url": "https://github.com/siriobelli/flame", + "rel": "/software/repository/github/siriobelli/flame", + "avatar": "https://avatars.githubusercontent.com/u/19779787?v=4", + "description": "Flame data reduction pipeline", "topics": [] }, { - "uid": "github/cloudflex-project/cloudflex", - "url": "https://github.com/cloudflex-project/cloudflex", - "rel": "/software/repository/github/cloudflex-project/cloudflex", - "avatar": "https://avatars.githubusercontent.com/u/149110839?v=4", + "uid": "github/schmidtfa/pyrasa", + "url": "https://github.com/schmidtfa/pyrasa", + "rel": "/software/repository/github/schmidtfa/pyrasa", + "avatar": "https://avatars.githubusercontent.com/u/50550513?v=4", + "description": "a package for spectral parametrization in python based on the IRASA algorithm", + "topics": [ + "aperiodic-exponent", + "eeg", + "electrophysiology", + "meg", + "neuroscience", + "oscillations", + "power-spectral-density", + "time-frequency-analysis" + ] + }, + { + "uid": "github/cgobat/asymmetric_uncertainty", + "url": "https://github.com/cgobat/asymmetric_uncertainty", + "rel": "/software/repository/github/cgobat/asymmetric_uncertainty", + "avatar": "https://avatars.githubusercontent.com/u/36030084?v=4", + "description": "A package that implements a class to represent numeric quantities with asymmetric uncertainties.", + "topics": [ + "uncertainty-propagation", + "asymmetric-uncertainties", + "error-propagation", + "python" + ] + }, + { + "uid": "github/shandley/hecatomb", + "url": "https://github.com/shandley/hecatomb", + "rel": "/software/repository/github/shandley/hecatomb", + "avatar": "https://avatars.githubusercontent.com/u/660111?v=4", + "description": "hecatomb is a virome analysis pipeline for analysis of Illumina sequence data", + "topics": [ + "virome", + "viral-metagenomes", + "snakemake" + ] + }, + { + "uid": "github/fusk-kpu/StressResponseGenesAtlas", + "url": "https://github.com/fusk-kpu/StressResponseGenesAtlas", + "rel": "/software/repository/github/fusk-kpu/StressResponseGenesAtlas", + "avatar": "https://avatars.githubusercontent.com/u/125861730?v=4", "description": null, "topics": [] }, { - "uid": "github/mindearth/mobilkit", - "url": "https://github.com/mindearth/mobilkit", - "rel": "/software/repository/github/mindearth/mobilkit", - "avatar": "https://avatars.githubusercontent.com/u/79261696?v=4", - "description": "A Python Toolkit for Urban Resilience and Disaster Risk Management Analytics using High Frequency Human Mobility Data", + "uid": "github/jstjohn/SeqPrep", + "url": "https://github.com/jstjohn/SeqPrep", + "rel": "/software/repository/github/jstjohn/SeqPrep", + "avatar": "https://avatars.githubusercontent.com/u/459014?v=4", + "description": "Tool for stripping adaptors and/or merging paired reads with overlap into single reads.", "topics": [] }, { - "uid": "github/decargroup/pykoop", - "url": "https://github.com/decargroup/pykoop", - "rel": "/software/repository/github/decargroup/pykoop", - "avatar": "https://avatars.githubusercontent.com/u/65682789?v=4", - "description": "Koopman operator identification library in Python, compatible with `scikit-learn`", + "uid": "github/MichaelDAlbrow/CMDFitter", + "url": "https://github.com/MichaelDAlbrow/CMDFitter", + "rel": "/software/repository/github/MichaelDAlbrow/CMDFitter", + "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", + "description": "Fit a probabilistic generative model to a colour-magnitude diagram.", + "topics": [] + }, + { + "uid": "github/MichaelDAlbrow/pyDIA", + "url": "https://github.com/MichaelDAlbrow/pyDIA", + "rel": "/software/repository/github/MichaelDAlbrow/pyDIA", + "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", + "description": "pyDIA is a modular python package for performing star detection, difference imaging and photometry on astronomical images.", + "topics": [] + }, + { + "uid": "github/MichaelDAlbrow/Dazzle", + "url": "https://github.com/MichaelDAlbrow/Dazzle", + "rel": "/software/repository/github/MichaelDAlbrow/Dazzle", + "avatar": "https://avatars.githubusercontent.com/u/24738658?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/AlexanderJuestel/pyheatdemand", + "url": "https://github.com/AlexanderJuestel/pyheatdemand", + "rel": "/software/repository/github/AlexanderJuestel/pyheatdemand", + "avatar": "https://avatars.githubusercontent.com/u/45469915?v=4", + "description": "Processing Tool for Heat Demand Data", "topics": [ - "koopman", - "machine-learning", - "dynamical-systems", - "control", - "scikit-learn" + "geospatial-data", + "geospatial-data-analysis", + "heatmaps", + "spatial-data", + "spatial-data-analysis" ] }, { - "uid": "github/linsalrob/PhiSpy", - "url": "https://github.com/linsalrob/PhiSpy", - "rel": "/software/repository/github/linsalrob/PhiSpy", - "avatar": "https://avatars.githubusercontent.com/u/836231?v=4", - "description": "Prediction of prophages from bacterial genomes", + "uid": "github/arumugamlab/msamtools", + "url": "https://github.com/arumugamlab/msamtools", + "rel": "/software/repository/github/arumugamlab/msamtools", + "avatar": "https://avatars.githubusercontent.com/u/56064268?v=4", + "description": "Metagenomics-related extended functionalities to samtools", "topics": [] }, { - "uid": "github/hippylib/soupy", - "url": "https://github.com/hippylib/soupy", - "rel": "/software/repository/github/hippylib/soupy", - "avatar": "https://avatars.githubusercontent.com/u/16692537?v=4", - "description": "Stochastic Optimization under Uncertainty in Python.", + "uid": "github/dylancromer/maszcal", + "url": "https://github.com/dylancromer/maszcal", + "rel": "/software/repository/github/dylancromer/maszcal", + "avatar": "https://avatars.githubusercontent.com/u/24197261?v=4", + "description": "Mass calibrations for thermal-SZ clusters", "topics": [] }, { - "uid": "github/multiply-org/sar-pre-processing", - "url": "https://github.com/multiply-org/sar-pre-processing", - "rel": "/software/repository/github/multiply-org/sar-pre-processing", - "avatar": "https://avatars.githubusercontent.com/u/22216958?v=4", - "description": "This is the MULTIPLY repository containing the functionality for SAR pre processing.", + "uid": "github/dylancromer/ostrich", + "url": "https://github.com/dylancromer/ostrich", + "rel": "/software/repository/github/dylancromer/ostrich", + "avatar": "https://avatars.githubusercontent.com/u/24197261?v=4", + "description": null, "topics": [] }, { - "uid": "github/paulsengroup/hictk", - "url": "https://github.com/paulsengroup/hictk", - "rel": "/software/repository/github/paulsengroup/hictk", - "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", - "description": "Blazing fast toolkit to work with .hic and .cool files", + "uid": "github/ci-for-science/self-hosted-runners", + "url": "https://github.com/ci-for-research/self-hosted-runners", + "rel": "/software/repository/github/ci-for-science/self-hosted-runners", + "avatar": "https://avatars3.githubusercontent.com/u/67105980?v=4", + "description": "Recipe to install and configure a GitHub action runner using Ansible", "topics": [ - "bioinformatics", - "cli-application", - "conversion", - "cooler", - "cxx", - "cxx-library", - "cxx17", - "hic", - "hictk" + "continuous-integration", + "github-actions" ] }, { - "uid": "github/paulsengroup/hictkpy", - "url": "https://github.com/paulsengroup/hictkpy", - "rel": "/software/repository/github/paulsengroup/hictkpy", - "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", - "description": "Python bindings for hictk: read and write .cool and .hic files directly from Python", + "uid": "github/bcgov/shinyssdtools", + "url": "https://github.com/bcgov/shinyssdtools", + "rel": "/software/repository/github/bcgov/shinyssdtools", + "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", + "description": "Shiny interface to ssdtools R package", "topics": [ - "bindings", - "bioinformatics", - "cooler", - "hic", - "hictk", - "python3" + "ssd", + "env", + "species-sensitivity-distribution", + "water-quality-guideline" ] }, { - "uid": "github/paulsengroup/StripePy", - "url": "https://github.com/paulsengroup/StripePy", - "rel": "/software/repository/github/paulsengroup/StripePy", - "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", - "description": "StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning", - "topics": [] + "uid": "github/bcgov/ssdtools", + "url": "https://github.com/bcgov/ssdtools", + "rel": "/software/repository/github/bcgov/ssdtools", + "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", + "description": "An R package to fit and plot Species Sensitivity Distributions (SSDs)", + "topics": [ + "rstats", + "ecotoxicology", + "species-sensitivity-distribution", + "env" + ] }, { - "uid": "github/paulsengroup/hictkR", - "url": "https://github.com/paulsengroup/hictkR", - "rel": "/software/repository/github/paulsengroup/hictkR", - "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", - "description": "R bindings for hictk: read .cool and .hic files directly from R", + "uid": "github/bcgov/bcdata", + "url": "https://github.com/bcgov/bcdata", + "rel": "/software/repository/github/bcgov/bcdata", + "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", + "description": "An R package for searching & retrieving data from the B.C. Data Catalogue", "topics": [ - "bindings", - "bioinformatics", - "cooler", - "hic", - "hictk", + "env", + "rstats", "r", - "hi-c" + "data-science", + "r-package", + "citz", + "bcdc" + ] + }, + { + "uid": "github/fury-gl/fury", + "url": "https://github.com/fury-gl/fury", + "rel": "/software/repository/github/fury-gl/fury", + "avatar": "https://avatars.githubusercontent.com/u/43426015?v=4", + "description": "FURY - Free Unified Rendering in pYthon.", + "topics": [ + "scientific-visualization", + "python", + "scriptable-animations", + "hacktoberfest", + "game-engine", + "simulation", + "shaders", + "3d-graphics" + ] + }, + { + "uid": "github/coder/code-server", + "url": "https://github.com/coder/code-server", + "rel": "/software/repository/github/coder/code-server", + "avatar": "https://avatars.githubusercontent.com/u/95932066?v=4", + "description": "VS Code in the browser", + "topics": [ + "vscode", + "vscode-remote", + "ide", + "remote-work", + "development-environment", + "dev-tools", + "browser-ide" + ] + }, + { + "uid": "github/vbaliga/gaussplotR", + "url": "https://github.com/vbaliga/gaussplotR", + "rel": "/software/repository/github/vbaliga/gaussplotR", + "avatar": "https://avatars.githubusercontent.com/u/9795391?v=4", + "description": "\ud83d\udd14 Fit, predict, and plot 2D Gaussians in R", + "topics": [ + "gaussian", + "r", + "rstats", + "gaussian-interpolation", + "gaussian-plot", + "plotting", + "gaussian-volume", + "2d-gaussian", + "gaussian-fit" + ] + }, + { + "uid": "github/ZJUFanLab/scTITANS", + "url": "https://github.com/ZJUFanLab/scTITANS", + "rel": "/software/repository/github/ZJUFanLab/scTITANS", + "avatar": "https://avatars.githubusercontent.com/u/53822310?v=4", + "description": "Identifying key genes and cell subclusters for time-series single cell sequencing data", + "topics": [ + "single-cell-rna-seq", + "time-series-analysis" + ] + }, + { + "uid": "github/ZJUFanLab/bulk2space", + "url": "https://github.com/ZJUFanLab/bulk2space", + "rel": "/software/repository/github/ZJUFanLab/bulk2space", + "avatar": "https://avatars.githubusercontent.com/u/53822310?v=4", + "description": "a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles", + "topics": [ + "bulk-sequencing", + "deep-learning", + "scrna-seq", + "spatial-transcriptomics" ] }, { @@ -18094,4995 +17667,3941 @@ ] }, { - "uid": "github/seqan/lara", - "url": "https://github.com/seqan/lara", - "rel": "/software/repository/github/seqan/lara", - "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", - "description": "LaRA 2: Lagrangian Relaxed structural Alignment", - "topics": [ - "bioinformatics", - "rna", - "alignment", - "rna-structure" - ] + "uid": "github/HannahMDoherty/ChemGAPP", + "url": "https://github.com/HannahMDoherty/ChemGAPP", + "rel": "/software/repository/github/HannahMDoherty/ChemGAPP", + "avatar": "https://avatars.githubusercontent.com/u/92042396?v=4", + "description": "A package and series of Streamlit apps for analysing chemical genomic screen data", + "topics": [] }, { - "uid": "github/seqan/lambda", - "url": "https://github.com/seqan/lambda", - "rel": "/software/repository/github/seqan/lambda", - "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", - "description": "LAMBDA \u2013 the Local Aligner for Massive Biological DatA ", - "topics": [ - "bioinformatics", - "blast", - "blast-searches", - "ncbi-taxonomy", - "alignment", - "metagenomics", - "protein-sequences", - "high-performance", - "cpp14", - "seqan" - ] + "uid": "github/joachimwolff/hyperparameterScoringHiC", + "url": "https://github.com/joachimwolff/hyperparameterScoringHiC", + "rel": "/software/repository/github/joachimwolff/hyperparameterScoringHiC", + "avatar": "https://avatars.githubusercontent.com/u/13435136?v=4", + "description": "Scoring functions for Hi-C matrix prediction optimization", + "topics": [] }, { - "uid": "github/seqan/flexbar", - "url": "https://github.com/seqan/flexbar", - "rel": "/software/repository/github/seqan/flexbar", - "avatar": "https://avatars.githubusercontent.com/u/1752144?v=4", - "description": "flexible barcode and adapter removal", + "uid": "github/joachimwolff/Hi-cGAN", + "url": "https://github.com/joachimwolff/Hi-cGAN", + "rel": "/software/repository/github/joachimwolff/Hi-cGAN", + "avatar": "https://avatars.githubusercontent.com/u/13435136?v=4", + "description": null, "topics": [] }, { - "uid": "github/parthenon-hpc-lab/parthenon", - "url": "https://github.com/parthenon-hpc-lab/parthenon", - "rel": "/software/repository/github/parthenon-hpc-lab/parthenon", - "avatar": "https://avatars.githubusercontent.com/u/115286644?v=4", - "description": "Parthenon AMR infrastructure ", + "uid": "github/CavendishAstrophysics/anmap", + "url": "https://github.com/CavendishAstrophysics/anmap", + "rel": "/software/repository/github/CavendishAstrophysics/anmap", + "avatar": "https://avatars.githubusercontent.com/u/7826375?v=4", + "description": "MRAO image and data analysis system", "topics": [] }, { - "uid": "github/jeertmans/DiffeRT2d", - "url": "https://github.com/jeertmans/DiffeRT2d", - "rel": "/software/repository/github/jeertmans/DiffeRT2d", - "avatar": "https://avatars.githubusercontent.com/u/27275099?v=4", - "description": "2D Toolbox for Differentiable Ray Tracing", - "topics": [ - "2d", - "differentiable", - "raytracing", - "telecommunications" - ] + "uid": "github/CavendishAstrophysics/postmortem", + "url": "https://github.com/CavendishAstrophysics/postmortem", + "rel": "/software/repository/github/CavendishAstrophysics/postmortem", + "avatar": "https://avatars.githubusercontent.com/u/7826375?v=4", + "description": " Visibility data reduction and map making package from MRAO", + "topics": [] }, { - "uid": "github/kritiyer/AngioNet", - "url": "https://github.com/kritiyer/AngioNet", - "rel": "/software/repository/github/kritiyer/AngioNet", - "avatar": "https://avatars.githubusercontent.com/u/34351910?v=4", - "description": "Semantic segmentation network for X-ray angiography images, based on Deeplabv3+", + "uid": "github/bc3LC/gcamreport", + "url": "https://github.com/bc3LC/gcamreport", + "rel": "/software/repository/github/bc3LC/gcamreport", + "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", + "description": "Package to process GCAM results and standardize the format", "topics": [] }, { - "uid": "github/chocoteam/pychoco", - "url": "https://github.com/chocoteam/pychoco", - "rel": "/software/repository/github/chocoteam/pychoco", - "avatar": "https://avatars.githubusercontent.com/u/3829941?v=4", - "description": null, + "uid": "github/bc3LC/medusa", + "url": "https://github.com/bc3LC/medusa", + "rel": "/software/repository/github/bc3LC/medusa", + "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", + "description": "R package to develop distributional analyzes (Spain)", "topics": [] }, { - "uid": "github/chocoteam/choco-solver", - "url": "https://github.com/chocoteam/choco-solver", - "rel": "/software/repository/github/chocoteam/choco-solver", - "avatar": "https://avatars.githubusercontent.com/u/3829941?v=4", - "description": "An open-source Java library for Constraint Programming", - "topics": [ - "constraint-programming", - "solver", - "constraints", - "csp", - "copr", - "constraint-satisfaction-problem", - "java", - "constraint-solver", - "constraint-optimisation-problem" - ] + "uid": "github/bc3LC/rhap", + "url": "https://github.com/bc3LC/rhap", + "rel": "/software/repository/github/bc3LC/rhap", + "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", + "description": "Econometric analysis to analyze health impacts attributable to indoor air pollution", + "topics": [] }, { - "uid": "github/python-hydro/pyro2", - "url": "https://github.com/python-hydro/pyro2", - "rel": "/software/repository/github/python-hydro/pyro2", - "avatar": "https://avatars.githubusercontent.com/u/40966363?v=4", - "description": "A framework for hydrodynamics explorations and prototyping", - "topics": [ - "finite-volume", - "finite-volume-methods", - "hydrodynamics", - "pyro", - "python", - "solver", - "advection", - "multigrid", - "simulation", - "astrophysical-simulation", - "pde" - ] + "uid": "github/mrempel/geohexviz", + "url": "https://github.com/mrempel/geohexviz", + "rel": "/software/repository/github/mrempel/geohexviz", + "avatar": "https://avatars.githubusercontent.com/u/7723447?v=4", + "description": "GeoHexViz - generating publication-quality geospatical visualization of hexagonally binned data", + "topics": [] }, { - "uid": "github/NSAPH-Software/CRE", - "url": "https://github.com/NSAPH-Software/CRE", - "rel": "/software/repository/github/NSAPH-Software/CRE", - "avatar": "https://avatars.githubusercontent.com/u/99349300?v=4", - "description": "The Causal Rule Ensemble Method", + "uid": "github/vincentlab/PyFR", + "url": "https://github.com/PyFR/PyFR", + "rel": "/software/repository/github/vincentlab/PyFR", + "avatar": "https://avatars.githubusercontent.com/u/54985610?v=4", + "description": "PyFR", "topics": [] }, { - "uid": "github/NSAPH-Software/GPCERF", - "url": "https://github.com/NSAPH-Software/GPCERF", - "rel": "/software/repository/github/NSAPH-Software/GPCERF", - "avatar": "https://avatars.githubusercontent.com/u/99349300?v=4", + "uid": "github/jianghuaijie/scLRTC", + "url": "https://github.com/jianghuaijie/scLRTC", + "rel": "/software/repository/github/jianghuaijie/scLRTC", + "avatar": "https://avatars.githubusercontent.com/u/30695578?v=4", + "description": "scLRTC:imputation for single-cell RNA-seq data via low rank tensor completion", + "topics": [] + }, + { + "uid": "github/ukoethe/vigra", + "url": "https://github.com/ukoethe/vigra", + "rel": "/software/repository/github/ukoethe/vigra", + "avatar": "https://avatars.githubusercontent.com/u/897680?v=4", + "description": "a generic C++ library for image analysis", + "topics": [] + }, + { + "uid": "github/bpairet/mayo_hci", + "url": "https://github.com/bpairet/mayo_hci", + "rel": "/software/repository/github/bpairet/mayo_hci", + "avatar": "https://avatars.githubusercontent.com/u/12684447?v=4", "description": null, "topics": [] }, { - "uid": "github/optuna/optuna", - "url": "https://github.com/optuna/optuna", - "rel": "/software/repository/github/optuna/optuna", - "avatar": "https://avatars3.githubusercontent.com/u/57251745?v=4", - "description": "A hyperparameter optimization framework", + "uid": "github/danStich/dia", + "url": "https://github.com/danStich/dia", + "rel": "/software/repository/github/danStich/dia", + "avatar": "https://avatars.githubusercontent.com/u/36766897?v=4", + "description": "An R package for the National Oceanic and Atmospheric Administration dam impact analysis", "topics": [ - "python", - "machine-learning", - "parallel", - "distributed", - "hyperparameter-optimization" + "dams", + "r-packages", + "fish", + "salmon", + "dam-impact-analysis", + "simulation" ] }, { - "uid": "github/tcollett/LensPop", - "url": "https://github.com/tcollett/LensPop", - "rel": "/software/repository/github/tcollett/LensPop", - "avatar": "https://avatars.githubusercontent.com/u/1520902?v=4", + "uid": "github/OncoRNALab/CiLiQuant", + "url": "https://github.com/OncoRNALab/CiLiQuant", + "rel": "/software/repository/github/OncoRNALab/CiLiQuant", + "avatar": "https://avatars.githubusercontent.com/u/74721403?v=4", "description": null, "topics": [] }, { - "uid": "github/benlansdell/ethome", - "url": "https://github.com/benlansdell/ethome", - "rel": "/software/repository/github/benlansdell/ethome", - "avatar": "https://avatars.githubusercontent.com/u/7505975?v=4", - "description": "Tools for machine learning of animal behavior", + "uid": "github/fogellab/multiWGCNA", + "url": "https://github.com/fogellab/multiWGCNA", + "rel": "/software/repository/github/fogellab/multiWGCNA", + "avatar": "https://avatars.githubusercontent.com/u/117482572?v=4", + "description": "an R package for deep mining gene co-expression networks in multi-trait expression data", + "topics": [] + }, + { + "uid": "github/kanaverse/kana", + "url": "https://github.com/kanaverse/kana", + "rel": "/software/repository/github/kanaverse/kana", + "avatar": "https://avatars.githubusercontent.com/u/125705984?v=4", + "description": "Single cell analysis in the browser", "topics": [ - "boris", - "dlc", - "pose-tracking", - "supervised-learning", - "deeplabcut", - "neurodata-without-borders", - "ndx-pose" + "single-cell", + "interactive-visualizations", + "exploratory-data-analysis", + "webassembly", + "rna-seq", + "cite-seq", + "bioinformatics", + "interactive-analysis" ] }, { - "uid": "github/beagle-dev/beagle-lib", - "url": "https://github.com/beagle-dev/beagle-lib", - "rel": "/software/repository/github/beagle-dev/beagle-lib", - "avatar": "https://avatars.githubusercontent.com/u/780253?v=4", - "description": "general purpose library for evaluating the likelihood of sequence evolution on trees", + "uid": "github/cvbuchem/LavAtmos", + "url": "https://github.com/cvbuchem/LavAtmos", + "rel": "/software/repository/github/cvbuchem/LavAtmos", + "avatar": "https://avatars.githubusercontent.com/u/43961101?v=4", + "description": "This code performs gas-melt equilibrium calculations for a given temperature and melt composition.", "topics": [] }, { - "uid": "github/astro-datalab/noaosourcecatalog", - "url": "https://github.com/astro-datalab/noaosourcecatalog", - "rel": "/software/repository/github/astro-datalab/noaosourcecatalog", - "avatar": "https://avatars.githubusercontent.com/u/38049825?v=4", - "description": "Source catalog of all NOAO imaging data", + "uid": "github/skiehl/wwz", + "url": "https://github.com/skiehl/wwz", + "rel": "/software/repository/github/skiehl/wwz", + "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", + "description": "Weighted wavelet z-transform (WWZ) analysis package", "topics": [] }, { - "uid": "github/ChenfuShi/HiChIP_peaks", - "url": "https://github.com/ChenfuShi/HiChIP_peaks", - "rel": "/software/repository/github/ChenfuShi/HiChIP_peaks", - "avatar": "https://avatars.githubusercontent.com/u/40122452?v=4", - "description": "A tool to analyse HiChIP data", - "topics": [ - "bioinformatics", - "bioinformatics-tool", - "hichip" - ] + "uid": "github/skiehl/lcsim", + "url": "https://github.com/skiehl/lcsim", + "rel": "/software/repository/github/skiehl/lcsim", + "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", + "description": "Blazar light curve simulation package", + "topics": [] }, { - "uid": "github/Gaiana/nirdust", - "url": "https://github.com/Gaiana/nirdust", - "rel": "/software/repository/github/Gaiana/nirdust", - "avatar": "https://avatars.githubusercontent.com/u/71792014?v=4", - "description": "Nirdust is a python package that uses K-band (2.2 micrometers) spectra to measure the temperature of the dust heated by a type 2 Active Galactic Nuclei (AGN) accretion disk.", + "uid": "github/skiehl/polarizationtools", + "url": "https://github.com/skiehl/polarizationtools", + "rel": "/software/repository/github/skiehl/polarizationtools", + "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", + "description": "Tools to deal with astrophysical polarization data in python3", "topics": [ - "spectra", - "dust", - "agn", - "astronomy", - "galaxies" + "astrophysics", + "blazar", + "polarization", + "randomwalk", + "stochastic-processes", + "stokes-parameters", + "time-series-analysis", + "evpa", + "evpa-rotation" ] }, { - "uid": "github/duetosymmetry/qnm", - "url": "https://github.com/duetosymmetry/qnm", - "rel": "/software/repository/github/duetosymmetry/qnm", - "avatar": "https://avatars.githubusercontent.com/u/679461?v=4", - "description": "Python package for computing Kerr quasinormal mode frequencies, separation constants, and spherical-spheroidal mixing coefficients", - "topics": [ - "python", - "scientific-computing", - "numerical-methods", - "physics", - "black-holes", - "general-relativity" - ] + "uid": "github/NikolayOskolkov/MCWorkflow", + "url": "https://github.com/NikolayOskolkov/MCWorkflow", + "rel": "/software/repository/github/NikolayOskolkov/MCWorkflow", + "avatar": "https://avatars.githubusercontent.com/u/49948664?v=4", + "description": null, + "topics": [] }, { - "uid": "github/aiproteomics/aiproteomics", - "url": "https://github.com/aiproteomics/aiproteomics", - "rel": "/software/repository/github/aiproteomics/aiproteomics", - "avatar": "https://avatars.githubusercontent.com/u/89943033?v=4", - "description": "A package for MSMS spectral library prediction models from the field of (phospho-)proteomics, intended to facilitate the testing and comparison of different neural network architectures and existing models.", + "uid": "github/SDTC-CPMed/scDrugPrio", + "url": "https://github.com/SDTC-CPMed/scDrugPrio", + "rel": "/software/repository/github/SDTC-CPMed/scDrugPrio", + "avatar": "https://avatars.githubusercontent.com/u/61544709?v=4", + "description": "Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease", "topics": [ - "msms", - "mass-spectrometry", - "deep-learning", - "spectral-library" + "single-cell" ] }, { - "uid": "github/Hoeijmakers/tayph", - "url": "https://github.com/Hoeijmakers/tayph", - "rel": "/software/repository/github/Hoeijmakers/tayph", - "avatar": "https://avatars.githubusercontent.com/u/57099343?v=4", - "description": "Analysis of high resolution spectroscopic time-series of exoplanets", + "uid": "github/LindleyLentati/TempoNest", + "url": "https://github.com/LindleyLentati/TempoNest", + "rel": "/software/repository/github/LindleyLentati/TempoNest", + "avatar": "https://avatars.githubusercontent.com/u/3535163?v=4", + "description": "Bayesian analysis tool for pulsar timing", "topics": [] }, { - "uid": "github/agordon/fastx_toolkit", - "url": "https://github.com/agordon/fastx_toolkit", - "rel": "/software/repository/github/agordon/fastx_toolkit", - "avatar": "https://avatars.githubusercontent.com/u/523057?v=4", - "description": "FASTA/FASTQ pre-processing programs", + "uid": "github/LindleyLentati/Cobra", + "url": "https://github.com/LindleyLentati/Cobra", + "rel": "/software/repository/github/LindleyLentati/Cobra", + "avatar": "https://avatars.githubusercontent.com/u/3535163?v=4", + "description": "Bayesian Pulsar Searching", "topics": [] }, { - "uid": "github/mamartinod/grip-nulling", - "url": "https://github.com/mamartinod/grip-nulling", - "rel": "/software/repository/github/mamartinod/grip-nulling", - "avatar": "https://avatars.githubusercontent.com/u/4233805?v=4", - "description": "Nulling Data Processing Software", - "topics": [] + "uid": "github/seisman/HinetPy", + "url": "https://github.com/seisman/HinetPy", + "rel": "/software/repository/github/seisman/HinetPy", + "avatar": "https://avatars.githubusercontent.com/u/3974108?v=4", + "description": "A Python package for accessing and processing NIED Hi-net seismic data.", + "topics": [ + "python", + "seismology", + "sac", + "win32", + "hinet" + ] }, { - "uid": "github/tnakazato/priism", - "url": "https://github.com/tnakazato/priism", - "rel": "/software/repository/github/tnakazato/priism", - "avatar": "https://avatars.githubusercontent.com/u/17893104?v=4", - "description": "PRIISM: Python Module for Radio Interferometry Imaging with Sparse Modeling", + "uid": "github/Dylan-Aliberti/Kepler-Collisions", + "url": "https://github.com/Dylan-Aliberti/Kepler-Collisions", + "rel": "/software/repository/github/Dylan-Aliberti/Kepler-Collisions", + "avatar": "https://avatars.githubusercontent.com/u/112291944?v=4", + "description": "Code used for testing the the analytic propagator.", "topics": [] }, { - "uid": "github/benjaminbolling/DynaGUI", - "url": "https://github.com/benjaminbolling/DynaGUI", - "rel": "/software/repository/github/benjaminbolling/DynaGUI", - "avatar": "https://avatars2.githubusercontent.com/u/56224950?v=4", - "description": "A Dynamic Graphical User Interface package, which gives users a method to construct temporary, permanent and/or a set of GUI:s for users in a simple and fast manner combined with diagnostics tools (with advance 1D and 2D plotting methods).", + "uid": "github/OpenBioLink/Explorer", + "url": "https://github.com/OpenBioLink/Explorer", + "rel": "/software/repository/github/OpenBioLink/Explorer", + "avatar": "https://avatars.githubusercontent.com/u/57104313?v=4", + "description": null, "topics": [] }, { - "uid": "github/benjaminbolling/RSW", - "url": "https://github.com/benjaminbolling/RSW", - "rel": "/software/repository/github/benjaminbolling/RSW", - "avatar": "https://avatars.githubusercontent.com/u/56224950?v=4", - "description": "A Computational Approach to Generate Multi-Shift Rotational Workforce Schedules.", - "topics": [] + "uid": "github/gdalle/HiddenMarkovModels.jl", + "url": "https://github.com/gdalle/HiddenMarkovModels.jl", + "rel": "/software/repository/github/gdalle/HiddenMarkovModels.jl", + "avatar": "https://avatars.githubusercontent.com/u/22795598?v=4", + "description": "A Julia package for simulation, inference and learning of Hidden Markov Models.", + "topics": [ + "julia", + "hidden-markov-model", + "hmm", + "statistics", + "baum-welch", + "forward-backward", + "viterbi", + "markov" + ] }, { - "uid": "github/BrianAronson/birankr", - "url": "https://github.com/BrianAronson/birankr", - "rel": "/software/repository/github/BrianAronson/birankr", - "avatar": "https://avatars0.githubusercontent.com/u/6536984?v=4", - "description": "CRAN package for estimating various rank (centrality) measures of nodes in bipartite graphs (two-mode networks).", + "uid": "github/Someone789/galax2d", + "url": "https://github.com/Someone789/galax2d", + "rel": "/software/repository/github/Someone789/galax2d", + "avatar": "https://avatars.githubusercontent.com/u/11181246?v=4", + "description": "matlab or octave code to compute the 2D stationary solution of the isothermal Euler equations of gas dynamics in a rotating galaxy with a weak bar", "topics": [] }, { - "uid": "github/nickelnine37/pykronecker", - "url": "https://github.com/nickelnine37/pykronecker", - "rel": "/software/repository/github/nickelnine37/pykronecker", - "avatar": "https://avatars.githubusercontent.com/u/21191597?v=4", - "description": "A python library for creating Kronecker Product operators with efficient lazy computation", + "uid": "github/metaOmics/MetaPath", + "url": "https://github.com/metaOmics/MetaPath", + "rel": "/software/repository/github/metaOmics/MetaPath", + "avatar": "https://avatars.githubusercontent.com/u/32662743?v=4", + "description": "Meta analysis pathway enrichment", "topics": [] }, { - "uid": "github/chakrah/sage", - "url": "https://github.com/chakrah/sage", - "rel": "/software/repository/github/chakrah/sage", - "avatar": "https://avatars.githubusercontent.com/u/100677905?v=4", - "description": "This code creates the stellar activity grid for exoplanets", + "uid": "github/BiodataAnalysisGroup/kmerAnalyzer", + "url": "https://github.com/BiodataAnalysisGroup/kmerAnalyzer", + "rel": "/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", + "avatar": "https://avatars.githubusercontent.com/u/9251685?v=4", + "description": "An alignment-free method capable of processing and counting k-mers in a reasonable time, while evaluating multiple values of the k parameter concurrently.", + "topics": [ + "k-mers", + "unsupervised-learning", + "phylogenetics", + "feature-selection", + "sars-cov-2" + ] + }, + { + "uid": "github/BiodataAnalysisGroup/UMIc", + "url": "https://github.com/BiodataAnalysisGroup/UMIc", + "rel": "/software/repository/github/BiodataAnalysisGroup/UMIc", + "avatar": "https://avatars.githubusercontent.com/u/9251685?v=4", + "description": "A framework implementing a method for UMI deduplication and reads correction.", "topics": [] }, { - "uid": "github/python-streamz/streamz", - "url": "https://github.com/python-streamz/streamz", - "rel": "/software/repository/github/python-streamz/streamz", - "avatar": "https://avatars.githubusercontent.com/u/49496449?v=4", - "description": "Real-time stream processing for python", - "topics": [ - "streaming-data", - "python", - "async", - "real-time" - ] + "uid": "github/cns-iu/HRA-supporting-information", + "url": "https://github.com/cns-iu/HRA-supporting-information", + "rel": "/software/repository/github/cns-iu/HRA-supporting-information", + "avatar": "https://avatars.githubusercontent.com/u/10944420?v=4", + "description": null, + "topics": [] }, { - "uid": "github/CadenArmstrong/simuTrans", - "url": "https://github.com/CadenArmstrong/simuTrans", - "rel": "/software/repository/github/CadenArmstrong/simuTrans", - "avatar": "https://avatars.githubusercontent.com/u/3118402?v=4", - "description": "Exoplanet transit simulator.", + "uid": "github/RJArthern/WAVI.jl", + "url": "https://github.com/RJArthern/WAVI.jl", + "rel": "/software/repository/github/RJArthern/WAVI.jl", + "avatar": "https://avatars.githubusercontent.com/u/69319382?v=4", + "description": "WAVI ice sheet model", "topics": [] }, { - "uid": "github/newcleo-dev-team/lbh15", - "url": "https://github.com/newcleo-dev-team/lbh15", - "rel": "/software/repository/github/newcleo-dev-team/lbh15", - "avatar": "https://avatars.githubusercontent.com/u/113201176?v=4", - "description": "Compilation of thermo-physical properties for lead/bismuth-based liquid metals for fast reactor technology", + "uid": "github/tp2vis/distribute", + "url": "https://github.com/tp2vis/distribute", + "rel": "/software/repository/github/tp2vis/distribute", + "avatar": "https://avatars.githubusercontent.com/u/34458220?v=4", + "description": null, "topics": [ - "liquid-metal", - "nuclear-reactor", - "thermodynamic-properties" + "total", + "power", + "to", + "visibilities", + "tp2vis", + "alma", + "development", + "study" ] }, { - "uid": "github/GaetanBenoitDev/metaMDBG", - "url": "https://github.com/GaetanBenoitDev/metaMDBG", - "rel": "/software/repository/github/GaetanBenoitDev/metaMDBG", - "avatar": "https://avatars.githubusercontent.com/u/79975313?v=4", - "description": "MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.", - "topics": [] + "uid": "github/sjteresi/TE_Density", + "url": "https://github.com/sjteresi/TE_Density", + "rel": "/software/repository/github/sjteresi/TE_Density", + "avatar": "https://avatars.githubusercontent.com/u/27462523?v=4", + "description": "Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4", + "topics": [ + "transposable-elements", + "genome" + ] }, { - "uid": "github/Jurgenvilla/moons-sim", - "url": "https://github.com/Jurgenvilla/moons-sim", - "rel": "/software/repository/github/Jurgenvilla/moons-sim", - "avatar": "https://avatars.githubusercontent.com/u/2405448?v=4", - "description": "1D Spectral Simulator for VLT-MOONS", + "uid": "github/DragonflyTelescope/dfreproject", + "url": "https://github.com/DragonflyTelescope/dfreproject", + "rel": "/software/repository/github/DragonflyTelescope/dfreproject", + "avatar": "https://avatars.githubusercontent.com/u/92650601?v=4", + "description": "homegrown reprojection algorithm using torch", "topics": [] }, { - "uid": "github/wpb-astro/MCSED", - "url": "https://github.com/wpb-astro/MCSED", - "rel": "/software/repository/github/wpb-astro/MCSED", - "avatar": "https://avatars.githubusercontent.com/u/23195034?v=4", + "uid": "github/ablab/nerpa", + "url": "https://github.com/ablab/nerpa", + "rel": "/software/repository/github/ablab/nerpa", + "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", "description": null, "topics": [] }, { - "uid": "github/SimonPfeifer/cows", - "url": "https://github.com/SimonPfeifer/cows", - "rel": "/software/repository/github/SimonPfeifer/cows", - "avatar": "https://avatars.githubusercontent.com/u/32218575?v=4", - "description": null, - "topics": [] + "uid": "github/ablab/spades", + "url": "https://github.com/ablab/spades", + "rel": "/software/repository/github/ablab/spades", + "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", + "description": "SPAdes Genome Assembler", + "topics": [ + "genome-assembly", + "sequence-assembler", + "sequencing", + "transcriptome-assembly", + "illumina", + "metagenome-assembly", + "next-generation-sequencing" + ] }, { - "uid": "github/pennucci/PulsePortraiture", - "url": "https://github.com/pennucci/PulsePortraiture", - "rel": "/software/repository/github/pennucci/PulsePortraiture", - "avatar": "https://avatars.githubusercontent.com/u/1768226?v=4", - "description": "PulsePortraiture (PP): a wideband pulsar timing code written in python. It uses an extension of Joe Taylor's FFTFIT algorithm (Taylor 1992) to simultaneously measure a phase (TOA) and dispersion measure (DM). PSRCHIVE, lmfit, and the latest vertsions of numpy and scipy are required.", + "uid": "github/ablab/quast", + "url": "https://github.com/ablab/quast", + "rel": "/software/repository/github/ablab/quast", + "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", + "description": "Genome assembly evaluation tool", + "topics": [ + "bioinformatics", + "genome-assembly-evaluation", + "visualization", + "contigs" + ] + }, + { + "uid": "github/ablab/TandemTools", + "url": "https://github.com/ablab/TandemTools", + "rel": "/software/repository/github/ablab/TandemTools", + "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", + "description": "Tool for assessing/improving assembly quality in extra-long tandem repeats", "topics": [] }, { - "uid": "github/minkailin/stratsi", - "url": "https://github.com/minkailin/stratsi", - "rel": "/software/repository/github/minkailin/stratsi", - "avatar": "https://avatars.githubusercontent.com/u/4484564?v=4", - "description": "stratified streaming instability", + "uid": "github/nicolet5/DiffCapAnalyzer", + "url": "https://github.com/nicolet5/DiffCapAnalyzer", + "rel": "/software/repository/github/nicolet5/DiffCapAnalyzer", + "avatar": "https://avatars0.githubusercontent.com/u/34557361?v=4", + "description": "A tool for quantitative analysis of differential capacity data! ", "topics": [] }, { - "uid": "github/dealii/dealii", - "url": "https://github.com/dealii/dealii", - "rel": "/software/repository/github/dealii/dealii", - "avatar": "https://avatars.githubusercontent.com/u/7506070?v=4", - "description": "The development repository for the deal.II finite element library.", + "uid": "github/carnotresearch/cr-sparse", + "url": "https://github.com/carnotresearch/cr-sparse", + "rel": "/software/repository/github/carnotresearch/cr-sparse", + "avatar": "https://avatars.githubusercontent.com/u/71070447?v=4", + "description": "Functional models and algorithms for sparse signal processing", "topics": [ - "finite-elements", - "c-plus-plus" + "sparse-representations", + "jax", + "wavelets", + "convex-optimization", + "linear-operators", + "compressive-sensing", + "functional-programming", + "xla", + "l1-regularization", + "sparse-linear-systems" ] }, { - "uid": "github/3D-e-Chem/kripodb", - "url": "https://github.com/3D-e-Chem/kripodb", - "rel": "/software/repository/github/3D-e-Chem/kripodb", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Library to interact with Kripo fragment, fingerprint and similarity data files.", + "uid": "github/PDBeurope/pdb-images", + "url": "https://github.com/PDBeurope/pdb-images", + "rel": "/software/repository/github/PDBeurope/pdb-images", + "avatar": "https://avatars.githubusercontent.com/u/8808449?v=4", + "description": "Generates images from mmCIF/BCIF files", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-sygma", - "url": "https://github.com/3D-e-Chem/knime-sygma", - "rel": "/software/repository/github/3D-e-Chem/knime-sygma", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "KNIME nodes for Sygma", + "uid": "github/fjdu/rac-2d", + "url": "https://github.com/fjdu/rac-2d", + "rel": "/software/repository/github/fjdu/rac-2d", + "avatar": "https://avatars.githubusercontent.com/u/1042334?v=4", + "description": "Radiative transfer and chemistry", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-testflow", - "url": "https://github.com/3D-e-Chem/knime-testflow", - "rel": "/software/repository/github/3D-e-Chem/knime-testflow", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Test Knime workflows from a Junit test.", + "uid": "github/fjdu/myRadex", + "url": "https://github.com/fjdu/myRadex", + "rel": "/software/repository/github/fjdu/myRadex", + "avatar": "https://avatars.githubusercontent.com/u/1042334?v=4", + "description": "Similar to radex, with a different way to solve the statistical equilibrium problem", "topics": [] }, { - "uid": "github/3D-e-Chem/3D-e-Chem-VM", - "url": "https://github.com/3D-e-Chem/3D-e-Chem-VM", - "rel": "/software/repository/github/3D-e-Chem/3D-e-Chem-VM", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Virtual machine with all software and sample data to run 3D-e-Chem Knime workflows", + "uid": "github/djsutherland/py-sdm", + "url": "https://github.com/djsutherland/py-sdm", + "rel": "/software/repository/github/djsutherland/py-sdm", + "avatar": "https://avatars.githubusercontent.com/u/36478?v=4", + "description": "Python implementation of nonparametric nearest-neighbor-based estimators for divergences between distributions.", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-python-node-archetype", - "url": "https://github.com/3D-e-Chem/knime-python-node-archetype", - "rel": "/software/repository/github/3D-e-Chem/knime-python-node-archetype", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Knime Python node archetype", + "uid": "github/torluca/morphofit", + "url": "https://github.com/torluca/morphofit", + "rel": "/software/repository/github/torluca/morphofit", + "avatar": "https://avatars.githubusercontent.com/u/38278229?v=4", + "description": "A Python package for the morphological analysis of galaxies (Tortorelli & Mercurio 2023).", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-silicos-it", - "url": "https://github.com/3D-e-Chem/knime-silicos-it", - "rel": "/software/repository/github/3D-e-Chem/knime-silicos-it", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "KNIME nodes and example workflows for software made by Silicos-it, ie. align-it, shape-it", + "uid": "github/ClusterMonteCarlo/CMC-COSMIC", + "url": "https://github.com/ClusterMonteCarlo/CMC-COSMIC", + "rel": "/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", + "avatar": "https://avatars.githubusercontent.com/u/23002054?v=4", + "description": null, "topics": [] }, { - "uid": "github/3D-e-Chem/knime-sstea", - "url": "https://github.com/3D-e-Chem/knime-sstea", - "rel": "/software/repository/github/3D-e-Chem/knime-sstea", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Knime node to calculate ss-TEA score of sequence alignment and subfamily members.", - "topics": [] + "uid": "github/Tomaubier/CoperniFUS", + "url": "https://github.com/Tomaubier/CoperniFUS", + "rel": "/software/repository/github/Tomaubier/CoperniFUS", + "avatar": "https://avatars.githubusercontent.com/u/17113619?v=4", + "description": "A flexible Python-based GUI for stereotaxic experiment planning.", + "topics": [ + "neuroscience-experiments", + "neurostimulation", + "ultrasound" + ] }, { - "uid": "github/3D-e-Chem/knime-kripodb", - "url": "https://github.com/3D-e-Chem/knime-kripodb", - "rel": "/software/repository/github/3D-e-Chem/knime-kripodb", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Knime node for KripoDB package", + "uid": "github/Astro-Sean/escatter", + "url": "https://github.com/Astro-Sean/escatter", + "rel": "/software/repository/github/Astro-Sean/escatter", + "avatar": "https://avatars.githubusercontent.com/u/24963439?v=4", + "description": "Python script to perform Monte Carlo simulations of electron scattering events in interacting supernovae.", "topics": [] }, { - "uid": "github/3D-e-Chem/tycho-knime-node-archetype", - "url": "https://github.com/3D-e-Chem/tycho-knime-node-archetype", - "rel": "/software/repository/github/3D-e-Chem/tycho-knime-node-archetype", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Maven archetype for Knime node extension", + "uid": "github/Astro-Sean/autophot", + "url": "https://github.com/Astro-Sean/autophot", + "rel": "/software/repository/github/Astro-Sean/autophot", + "avatar": "https://avatars.githubusercontent.com/u/24963439?v=4", + "description": "The AUTOmated Photometry Of Transients (AutoPhOT) is a novel automated pipeline that is designed for rapid, publication-quality photometry of transients.", "topics": [] }, { - "uid": "github/3D-e-Chem/sygma", - "url": "https://github.com/3D-e-Chem/sygma", - "rel": "/software/repository/github/3D-e-Chem/sygma", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "A python library for prediction of drug metabolites", + "uid": "github/ericsteinbring/PDQ", + "url": "https://github.com/ericsteinbring/PDQ", + "rel": "/software/repository/github/ericsteinbring/PDQ", + "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", + "description": "The IDL code PDQ predicts the positions on the sky of high-redshift quasars that should provide photons that are both acausal and uncorrelated. The best dates and times for viewing those simultaneously with Gemini `Alopeke/Zorro (for high-framerate photometry) in the coming semester are reported. ", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-gpcrdb", - "url": "https://github.com/3D-e-Chem/knime-gpcrdb", - "rel": "/software/repository/github/3D-e-Chem/knime-gpcrdb", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "GPCRDB nodes for Knime", - "topics": [] - }, - { - "uid": "github/3D-e-Chem/knime-molviewer", - "url": "https://github.com/3D-e-Chem/knime-molviewer", - "rel": "/software/repository/github/3D-e-Chem/knime-molviewer", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "KNIME node which launches a web browser with moleculer viewer powered by webgl", - "topics": [] - }, - { - "uid": "github/3D-e-Chem/knime-pharmacophore", - "url": "https://github.com/3D-e-Chem/knime-pharmacophore", - "rel": "/software/repository/github/3D-e-Chem/knime-pharmacophore", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "KNIME nodes to read/write pharmacophore files", + "uid": "github/ericsteinbring/World_Observatory", + "url": "https://github.com/ericsteinbring/World_Observatory", + "rel": "/software/repository/github/ericsteinbring/World_Observatory", + "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", + "description": "World Observatory visualizes S/N-versus-cost tradeoffs for large optical/near-infrared telescopes.", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-klifs", - "url": "https://github.com/3D-e-Chem/knime-klifs", - "rel": "/software/repository/github/3D-e-Chem/knime-klifs", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Knime nodes to interact with KLIFS", + "uid": "github/ericsteinbring/Special-Blurring", + "url": "https://github.com/ericsteinbring/Special-Blurring", + "rel": "/software/repository/github/ericsteinbring/Special-Blurring", + "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", + "description": "Calculates the effect of quantum-foam blurring, appropriate for the special gamma-ray burst GRB221009A.", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-plants", - "url": "https://github.com/3D-e-Chem/knime-plants", - "rel": "/software/repository/github/3D-e-Chem/knime-plants", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "KNIME nodes to configure, run and analyze PLANTS protein-ligand docking", + "uid": "github/jakevdp/wpca", + "url": "https://github.com/jakevdp/wpca", + "rel": "/software/repository/github/jakevdp/wpca", + "avatar": "https://avatars.githubusercontent.com/u/781659?v=4", + "description": "Weighted Principal Component Analysis (PCA) in Python", "topics": [] }, { - "uid": "github/3D-e-Chem/knime-python-wrapper", - "url": "https://github.com/3D-e-Chem/knime-python-wrapper", - "rel": "/software/repository/github/3D-e-Chem/knime-python-wrapper", - "avatar": "https://avatars0.githubusercontent.com/u/14940717?v=4", - "description": "Utilities for development of KNIME nodes calling Python scripts.", - "topics": [] + "uid": "github/CNIC-Proteomics/TurboPutative-web", + "url": "https://github.com/CNIC-Proteomics/TurboPutative-web", + "rel": "/software/repository/github/CNIC-Proteomics/TurboPutative-web", + "avatar": "https://avatars.githubusercontent.com/u/28892822?v=4", + "description": null, + "topics": [ + "metabolomics", + "lc-ms", + "untargeted-metabolomics", + "data-processing" + ] }, { - "uid": "github/apcamargo/prodigal-gv", - "url": "https://github.com/apcamargo/prodigal-gv", - "rel": "/software/repository/github/apcamargo/prodigal-gv", - "avatar": "https://avatars.githubusercontent.com/u/22940964?v=4", - "description": "A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes", + "uid": "github/hues-platform/cesar-p-core", + "url": "https://github.com/hues-platform/cesar-p-core", + "rel": "/software/repository/github/hues-platform/cesar-p-core", + "avatar": "https://avatars.githubusercontent.com/u/22130502?v=4", + "description": "CESAR-P code library", "topics": [] }, { - "uid": "github/radiocosmology/driftscan", - "url": "https://github.com/radiocosmology/driftscan", - "rel": "/software/repository/github/radiocosmology/driftscan", - "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", - "description": "Data analysis of transit radio interferometers, particularly for 21cm cosmology.", + "uid": "github/HenrykHaniewicz/PSRVoid", + "url": "https://github.com/HenrykHaniewicz/PSRVoid", + "rel": "/software/repository/github/HenrykHaniewicz/PSRVoid", + "avatar": "https://avatars.githubusercontent.com/u/19167137?v=4", + "description": "The statistical suite to determine which integrated pulse profiles should go into your times-of-arrival! Also able to mine data from the ATNF catalog.", "topics": [] }, { - "uid": "github/radiocosmology/caput", - "url": "https://github.com/radiocosmology/caput", - "rel": "/software/repository/github/radiocosmology/caput", - "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", - "description": "Cluster Astronomical Python Utilities", + "uid": "github/IRCAD/camp", + "url": "https://github.com/IRCAD/camp", + "rel": "/software/repository/github/IRCAD/camp", + "avatar": "https://avatars.githubusercontent.com/u/45239033?v=4", + "description": "C++ multi-purpose reflection library", "topics": [] }, { - "uid": "github/radiocosmology/draco", - "url": "https://github.com/radiocosmology/draco", - "rel": "/software/repository/github/radiocosmology/draco", - "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", - "description": "A pipeline for the analysis and simulation of drift scan radio data", + "uid": "github/londumas/redvsblue", + "url": "https://github.com/londumas/redvsblue", + "rel": "/software/repository/github/londumas/redvsblue", + "avatar": "https://avatars.githubusercontent.com/u/3166436?v=4", + "description": "Quasar and emission line precise redshift fitting from prior", "topics": [ - "astrophysics", - "cosmology", - "radio-astronomy" + "redshift", + "pca-redshift", + "chi2", + "pixel", + "galaxy", + "quasar" ] }, { - "uid": "github/avapolzin/spike", - "url": "https://github.com/avapolzin/spike", - "rel": "/software/repository/github/avapolzin/spike", - "avatar": "https://avatars.githubusercontent.com/u/29441772?v=4", - "description": "All-in-one tool to generate, and correctly drizzle, HST, JWST, and Roman PSFs.", + "uid": "github/ialopezt/GalLenspy", + "url": "https://github.com/ialopezt/GalLenspy", + "rel": "/software/repository/github/ialopezt/GalLenspy", + "avatar": "https://avatars.githubusercontent.com/u/32373393?v=4", + "description": "This is a open code whose purpose is the reconstruction of mass profile in disc-like galaxies from the gravitational lensing effect.", "topics": [] }, { - "uid": "github/theonefromnowhere/FitCov", - "url": "https://github.com/theonefromnowhere/FitCov", - "rel": "/software/repository/github/theonefromnowhere/FitCov", - "avatar": "https://avatars.githubusercontent.com/u/74179509?v=4", - "description": "The code for the Fitted Covariance generation based on %paper link%", + "uid": "github/utrillalab/repromin", + "url": "https://github.com/utrillalab/repromin", + "rel": "/software/repository/github/utrillalab/repromin", + "avatar": "https://avatars2.githubusercontent.com/u/47798164?v=4", + "description": null, "topics": [] }, { - "uid": "github/cconroy20/alf", - "url": "https://github.com/cconroy20/alf", - "rel": "/software/repository/github/cconroy20/alf", - "avatar": "https://avatars.githubusercontent.com/u/7409786?v=4", - "description": "Absorption Line Fitter", - "topics": [] + "uid": "github/nedtaylor/athena", + "url": "https://github.com/nedtaylor/athena", + "rel": "/software/repository/github/nedtaylor/athena", + "avatar": "https://avatars.githubusercontent.com/u/71959356?v=4", + "description": "A Fortran-based feed-forward neural network library. Whilst this library currently has a focus on 3D convolutional neural networks (CNNs), it can handle most standard hidden layer forms of neural networks, with the plan to integrate more.", + "topics": [ + "convolution", + "feed-forward-neural-networks", + "fortran", + "machine-learning", + "neural-network", + "convolutional-neural-networks", + "cnn" + ] }, { - "uid": "github/cconroy20/fsps", - "url": "https://github.com/cconroy20/fsps", - "rel": "/software/repository/github/cconroy20/fsps", - "avatar": "https://avatars.githubusercontent.com/u/7409786?v=4", - "description": "Flexible Stellar Population Synthesis", - "topics": [] + "uid": "github/dib-lab/dammit", + "url": "https://github.com/dib-lab/dammit", + "rel": "/software/repository/github/dib-lab/dammit", + "avatar": "https://avatars.githubusercontent.com/u/1740697?v=4", + "description": "just annotate it, dammit!", + "topics": [ + "annotation", + "transcriptomics", + "bioinformatics" + ] }, { - "uid": "github/openvax/pyensembl", - "url": "https://github.com/openvax/pyensembl", - "rel": "/software/repository/github/openvax/pyensembl", - "avatar": "https://avatars.githubusercontent.com/u/33269729?v=4", - "description": "Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl ", - "topics": [] + "uid": "github/dib-lab/sourmash", + "url": "https://github.com/sourmash-bio/sourmash", + "rel": "/software/repository/github/dib-lab/sourmash", + "avatar": "https://avatars.githubusercontent.com/u/59402508?v=4", + "description": "Quickly search, compare, and analyze genomic and metagenomic data sets.", + "topics": [ + "minhash", + "bioinformatics", + "rust", + "python", + "sourmash" + ] }, { - "uid": "github/openvax/mhcflurry", - "url": "https://github.com/openvax/mhcflurry", - "rel": "/software/repository/github/openvax/mhcflurry", - "avatar": "https://avatars.githubusercontent.com/u/33269729?v=4", - "description": "Peptide-MHC I binding affinity prediction", + "uid": "github/dib-lab/TheGreatGenotyper", + "url": "https://github.com/dib-lab/TheGreatGenotyper", + "rel": "/software/repository/github/dib-lab/TheGreatGenotyper", + "avatar": "https://avatars.githubusercontent.com/u/1740697?v=4", + "description": null, "topics": [] }, { - "uid": "github/dcorre/otrain", - "url": "https://github.com/dcorre/otrain", - "rel": "/software/repository/github/dcorre/otrain", - "avatar": "https://avatars.githubusercontent.com/u/18632113?v=4", - "description": null, + "uid": "github/vdhooftcompmet/MS2LDA", + "url": "https://github.com/vdhooftcompmet/MS2LDA", + "rel": "/software/repository/github/vdhooftcompmet/MS2LDA", + "avatar": "https://avatars.githubusercontent.com/u/95919621?v=4", + "description": "Unsupervised Substructure Discovery using Topic Modelling with Automated Annotation.", "topics": [] }, { - "uid": "github/agshumate/LiftoffTools", - "url": "https://github.com/agshumate/LiftoffTools", - "rel": "/software/repository/github/agshumate/LiftoffTools", - "avatar": "https://avatars.githubusercontent.com/u/29218752?v=4", - "description": "is a toolkit to compare genes lifted between genome assemblies.", + "uid": "github/gperezs/StarcNet", + "url": "https://github.com/gperezs/StarcNet", + "rel": "/software/repository/github/gperezs/StarcNet", + "avatar": "https://avatars.githubusercontent.com/u/16939029?v=4", + "description": "Machine learning for star cluster classification", "topics": [] }, { - "uid": "github/fairtracks/omnipy_examples", - "url": "https://github.com/fairtracks/omnipy_examples", - "rel": "/software/repository/github/fairtracks/omnipy_examples", - "avatar": "https://avatars.githubusercontent.com/u/50033677?v=4", - "description": null, + "uid": "github/fchuffar/epimedtools", + "url": "https://github.com/fchuffar/epimedtools", + "rel": "/software/repository/github/fchuffar/epimedtools", + "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", + "description": "A package allowing multi-omics analysis using R", "topics": [] }, { - "uid": "github/pavanvidem/chira", - "url": "https://github.com/pavanvidem/chira", - "rel": "/software/repository/github/pavanvidem/chira", - "avatar": "https://avatars2.githubusercontent.com/u/5268277?v=4", - "description": "Chimeric Read Annotator", + "uid": "github/fchuffar/protopackage", + "url": "https://github.com/fchuffar/protopackage", + "rel": "/software/repository/github/fchuffar/protopackage", + "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", + "description": null, "topics": [] }, { - "uid": "github/mc-imperial/gpuverify", - "url": "https://github.com/mc-imperial/gpuverify", - "rel": "/software/repository/github/mc-imperial/gpuverify", - "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", - "description": "GPUVerify: a Verifier for GPU Kernels", + "uid": "github/fchuffar/dmethr", + "url": "https://github.com/fchuffar/dmethr", + "rel": "/software/repository/github/fchuffar/dmethr", + "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", + "description": "DNA Methylation repression of transcriptional activity", "topics": [] }, { - "uid": "github/mc-imperial/jfs", - "url": "https://github.com/mc-imperial/jfs", - "rel": "/software/repository/github/mc-imperial/jfs", - "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", - "description": "Constraint solver based on coverage-guided fuzzing", + "uid": "github/yatisht/usher", + "url": "https://github.com/yatisht/usher", + "rel": "/software/repository/github/yatisht/usher", + "avatar": "https://avatars.githubusercontent.com/u/34664884?v=4", + "description": "Ultrafast Sample Placement on Existing Trees", "topics": [ - "floating-point-arithmetic", - "constraint-solver", - "smtlibv2", - "smtlib", - "fuzzing", - "llvm", - "libfuzzer", - "z3", - "jit", - "coverage-guided-fuzzing" + "sars-cov-2", + "phylogenetics", + "maximum-parsimony", + "usher", + "genome-browser", + "phylogenetic-placement" ] }, { - "uid": "github/mc-imperial/multicore-test-harness", - "url": "https://github.com/mc-imperial/multicore-test-harness", - "rel": "/software/repository/github/mc-imperial/multicore-test-harness", - "avatar": "https://avatars.githubusercontent.com/u/7672161?v=4", - "description": "A multicore microprocessor test harness for measuring interference", + "uid": "github/nemesiscode/radtrancode", + "url": "https://github.com/nemesiscode/radtrancode", + "rel": "/software/repository/github/nemesiscode/radtrancode", + "avatar": "https://avatars.githubusercontent.com/u/47110639?v=4", + "description": "This is the repository of the NEMESIS/RADTRANS project. It is described on the associated web page listed here.", "topics": [] }, { - "uid": "github/leprojetcastor/castor", - "url": "https://github.com/leprojetcastor/castor", - "rel": "/software/repository/github/leprojetcastor/castor", - "avatar": "https://avatars.githubusercontent.com/u/75743001?v=4", - "description": null, - "topics": [] + "uid": "github/Punzo/SlicerAstro", + "url": "https://github.com/Punzo/SlicerAstro", + "rel": "/software/repository/github/Punzo/SlicerAstro", + "avatar": "https://avatars.githubusercontent.com/u/7985338?v=4", + "description": "Astronomy (HI) extension for 3DSlicer (https://www.slicer.org/)", + "topics": [ + "astronomy", + "3d", + "visualization", + "3dslicer", + "image-processing", + "visual-analytics", + "c-plus-plus" + ] }, { - "uid": "github/yfperezg/frisbhee", - "url": "https://github.com/yfperezg/frisbhee", - "rel": "/software/repository/github/yfperezg/frisbhee", - "avatar": "https://avatars.githubusercontent.com/u/50493467?v=4", - "description": null, - "topics": [] + "uid": "github/haowenz/chromap", + "url": "https://github.com/haowenz/chromap", + "rel": "/software/repository/github/haowenz/chromap", + "avatar": "https://avatars.githubusercontent.com/u/7692599?v=4", + "description": "is an ultrafast method for aligning and preprocessing high throughput chromatin profiles.", + "topics": [ + "bioinformatics", + "sequence-analysis", + "genomics", + "chromatin-profiles" + ] }, { - "uid": "github/spedas/pyspedas", - "url": "https://github.com/spedas/pyspedas", - "rel": "/software/repository/github/spedas/pyspedas", - "avatar": "https://avatars.githubusercontent.com/u/16089566?v=4", - "description": "Python-based Space Physics Environment Data Analysis Software", + "uid": "github/n8thangreen/BCEA", + "url": "https://github.com/n8thangreen/BCEA", + "rel": "/software/repository/github/n8thangreen/BCEA", + "avatar": "https://avatars.githubusercontent.com/u/3061918?v=4", + "description": "Bayesian Cost Effectiveness Analysis. Given the results of a Bayesian model (possibly based on MCMC) in the form of simulations from the posterior distributions of suitable variables of costs and clinical benefits for two or more interventions, produces a health economic evaluation. Compares one of the interventions (the \"reference\") to the others (\"comparators\"). Produces many summary and plots to analyse the results", "topics": [ - "space-physics", - "python", - "heliophysics", - "space", - "science-research" + "cost-effectiveness", + "bayesian" ] }, { - "uid": "github/Libsharp/libsharp", - "url": "https://github.com/Libsharp/libsharp", - "rel": "/software/repository/github/Libsharp/libsharp", - "avatar": "https://avatars.githubusercontent.com/u/33892807?v=4", - "description": "Library for fast spherical harmonic transforms, see http://arxiv.org/abs/1303.4945", + "uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", + "url": "https://github.com/ComputationalRegulatoryGenomicsICL/TFBS", + "rel": "/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", + "avatar": "https://avatars.githubusercontent.com/u/1623799?v=4", + "description": "TFBS perl module", "topics": [] }, { - "uid": "github/vincentlab/PyFR", - "url": "https://github.com/PyFR/PyFR", - "rel": "/software/repository/github/vincentlab/PyFR", - "avatar": "https://avatars.githubusercontent.com/u/54985610?v=4", - "description": "PyFR", + "uid": "github/rx-li/EasyCellType", + "url": "https://github.com/rx-li/EasyCellType", + "rel": "/software/repository/github/rx-li/EasyCellType", + "avatar": "https://avatars.githubusercontent.com/u/78374670?v=4", + "description": null, "topics": [] }, { - "uid": "github/nuclear-multimessenger-astronomy/nmma", - "url": "https://github.com/nuclear-multimessenger-astronomy/nmma", - "rel": "/software/repository/github/nuclear-multimessenger-astronomy/nmma", - "avatar": "https://avatars.githubusercontent.com/u/98920591?v=4", - "description": "A pythonic library for probing nuclear physics and cosmology with multimessenger analysis", + "uid": "github/maxibor/sam2lca", + "url": "https://github.com/maxibor/sam2lca", + "rel": "/software/repository/github/maxibor/sam2lca", + "avatar": "https://avatars.githubusercontent.com/u/8630837?v=4", + "description": "Lowest Common Ancestor from a SAM/BAM/CRAM alignment file", "topics": [] }, { - "uid": "github/nboley/idr", - "url": "https://github.com/nboley/idr", - "rel": "/software/repository/github/nboley/idr", - "avatar": "https://avatars.githubusercontent.com/u/831639?v=4", - "description": "IDR ", + "uid": "github/hall-lab/speedseq", + "url": "https://github.com/hall-lab/speedseq", + "rel": "/software/repository/github/hall-lab/speedseq", + "avatar": "https://avatars.githubusercontent.com/u/7242168?v=4", + "description": "A flexible framework for rapid genome analysis and interpretation", "topics": [] }, { - "uid": "github/grzeimann/Diagnose", - "url": "https://github.com/grzeimann/Diagnose", - "rel": "/software/repository/github/grzeimann/Diagnose", - "avatar": "https://avatars.githubusercontent.com/u/18533172?v=4", - "description": null, + "uid": "github/hall-lab/bamkit", + "url": "https://github.com/hall-lab/bamkit", + "rel": "/software/repository/github/hall-lab/bamkit", + "avatar": "https://avatars.githubusercontent.com/u/7242168?v=4", + "description": "Tools for common BAM file manipulations", "topics": [] }, { - "uid": "github/FRED-2/OptiType", - "url": "https://github.com/FRED-2/OptiType", - "rel": "/software/repository/github/FRED-2/OptiType", - "avatar": "https://avatars.githubusercontent.com/u/7511864?v=4", - "description": "Precision HLA typing from next-generation sequencing data", - "topics": [] + "uid": "github/WebSky-CITA/XGPaint.jl", + "url": "https://github.com/WebSky-CITA/XGPaint.jl", + "rel": "/software/repository/github/WebSky-CITA/XGPaint.jl", + "avatar": "https://avatars.githubusercontent.com/u/128504594?v=4", + "description": "fast forward simulations of extragalactic foregrounds", + "topics": [ + "cosmology", + "julia" + ] }, { - "uid": "github/bhorowitz/HyPhy-public", - "url": "https://github.com/bhorowitz/HyPhy-public", - "rel": "/software/repository/github/bhorowitz/HyPhy-public", - "avatar": "https://avatars.githubusercontent.com/u/6059772?v=4", - "description": "Deep generative model for painting hydrodynamical physics onto dark matter simulations", + "uid": "github/villrv/SuperRAENN", + "url": "https://github.com/villrv/SuperRAENN", + "rel": "/software/repository/github/villrv/SuperRAENN", + "avatar": "https://avatars.githubusercontent.com/u/3867995?v=4", + "description": "A recurrent autoencoder neural network-based classifier for SN light curves.", "topics": [] }, { - "uid": "github/somefunAgba/NLSIG-COVID19Lab", - "url": "https://github.com/somefunAgba/NLSIG-COVID19Lab", - "rel": "/software/repository/github/somefunAgba/NLSIG-COVID19Lab", - "avatar": "https://avatars.githubusercontent.com/u/6755741?v=4", - "description": "A nlogistic-sigmoid playground for modelling the COVID-19 pandemic growth", + "uid": "github/micahvista/MAMnet", + "url": "https://github.com/micahvista/MAMnet", + "rel": "/software/repository/github/micahvista/MAMnet", + "avatar": "https://avatars.githubusercontent.com/u/38337171?v=4", + "description": "MAMnet uses a deep learning network to call genetic variants from third generation DNA sequencing data.", "topics": [ - "covid-19", - "neural-networks", - "machine-learning", - "growth-process", - "epidemiology", - "logistic-regression", - "optimization", - "matlab", - "yir", - "deaths", - "infections", - "logistic-metrics", - "peak" + "bioinformatics", + "genomics", + "structural-variation-calling", + "structural-variations", + "deep-learning", + "deep-neural-networks" ] }, { - "uid": "github/xstarkit/mpi_xstar", - "url": "https://github.com/xstarkit/MPI_XSTAR", - "rel": "/software/repository/github/xstarkit/mpi_xstar", - "avatar": "https://avatars.githubusercontent.com/u/20077044?v=4", - "description": "MPI_XSTAR - MPI-based Parallelization of XSTAR Photoionization Program", - "topics": [ - "mpi-xstar", - "xstar-photoionization" - ] + "uid": "github/LandSciTech/ccviR", + "url": "https://github.com/LandSciTech/ccviR", + "rel": "/software/repository/github/LandSciTech/ccviR", + "avatar": "https://avatars.githubusercontent.com/u/41919529?v=4", + "description": "Implement NatureServe climate change vulnerability index in R", + "topics": [] }, { - "uid": "github/BradhamLab/icat", - "url": "https://github.com/BradhamLab/icat", - "rel": "/software/repository/github/BradhamLab/icat", - "avatar": "https://avatars.githubusercontent.com/u/39013433?v=4", - "description": "Identifying Cell-states Across Treatments", + "uid": "github/phirling/pyc2ray", + "url": "https://github.com/phirling/pyc2ray", + "rel": "/software/repository/github/phirling/pyc2ray", + "avatar": "https://avatars.githubusercontent.com/u/90903147?v=4", + "description": "Python interface to C2Ray, with GPU-acceleration", "topics": [ - "clustering", - "machine-learning", - "self-supervised-learning", - "semi-supervised-learning", - "single-cell", - "single-cell-analysis", - "single-cell-rna-seq" + "21cm", + "cosmology", + "reionization", + "radiative-transfer" ] }, { - "uid": "github/sciapp/sampledb", - "url": "https://github.com/sciapp/sampledb", - "rel": "/software/repository/github/sciapp/sampledb", - "avatar": "https://avatars.githubusercontent.com/u/9656894?v=4", - "description": "Sample and Measurement Metadata Database", - "topics": [] + "uid": "github/BerkeleyLab/caffeine", + "url": "https://github.com/BerkeleyLab/caffeine", + "rel": "/software/repository/github/BerkeleyLab/caffeine", + "avatar": "https://avatars.githubusercontent.com/u/18706005?v=4", + "description": "A parallel runtime library for Fortran compilers", + "topics": [ + "coarray", + "coarray-fortran", + "fortran-2018", + "pgas", + "partitioned-global-address-space", + "parallel-programming", + "runtime-library", + "fortran-2023", + "parallel-computing", + "parallelism" + ] }, { - "uid": "github/TearsWaiting/MIMML", - "url": "https://github.com/TearsWaiting/MIMML", - "rel": "/software/repository/github/TearsWaiting/MIMML", - "avatar": "https://avatars.githubusercontent.com/u/45462505?v=4", - "description": "The implement of MIMML in paper: Accelerating Bioactive Peptides Discovery via Mutual Information based Meta-learning", + "uid": "github/jkimlab/msPIPE", + "url": "https://github.com/jkimlab/msPIPE", + "rel": "/software/repository/github/jkimlab/msPIPE", + "avatar": "https://avatars.githubusercontent.com/u/19523543?v=4", + "description": null, "topics": [] }, { - "uid": "github/jaschers/damspi", - "url": "https://github.com/jaschers/damspi", - "rel": "/software/repository/github/jaschers/damspi", - "avatar": "https://avatars.githubusercontent.com/u/39126851?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/oscaribv/pyaneti", - "url": "https://github.com/oscaribv/pyaneti", - "rel": "/software/repository/github/oscaribv/pyaneti", - "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", - "description": "A multi-planet Radial Velocity and Transit modelling software", - "topics": [ - "exoplanets", - "planets", - "mcmc", - "radial-velocities", - "multi-planet-fitting", - "transiting-planets" - ] - }, - { - "uid": "github/oscaribv/exotrending", - "url": "https://github.com/oscaribv/exotrending", - "rel": "/software/repository/github/oscaribv/exotrending", - "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", - "description": "A fast and easy-to-use light curve detrending software for exoplanets", + "uid": "github/isoverse/isoreader", + "url": "https://github.com/isoverse/isoreader", + "rel": "/software/repository/github/isoverse/isoreader", + "avatar": "https://avatars.githubusercontent.com/u/47226588?v=4", + "description": "Read IRMS (Isotope Ratio Mass Spectrometry) data files into R", "topics": [ - "exoplanets", - "astronomy", - "astrophysics" + "r", + "data", + "isotopes", + "geochemistry", + "ecology" ] }, { - "uid": "github/oscaribv/citlalicue", - "url": "https://github.com/oscaribv/citlalicue", - "rel": "/software/repository/github/oscaribv/citlalicue", - "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", - "description": "Create and manipulate stellar light curves!", + "uid": "github/Degiacomi-Lab/molearn", + "url": "https://github.com/Degiacomi-Lab/molearn", + "rel": "/software/repository/github/Degiacomi-Lab/molearn", + "avatar": "https://avatars.githubusercontent.com/u/102035266?v=4", + "description": "protein conformational spaces meet machine learning", "topics": [ - "transits", - "light-curves", - "exoplanets", - "planets" + "machine-learning", + "molecular-dynamics", + "molecular-modeling", + "protein-structure" ] }, { - "uid": "github/dutilh/CAT", - "url": "https://github.com/dutilh/CAT", - "rel": "/software/repository/github/dutilh/CAT", - "avatar": "https://avatars.githubusercontent.com/u/15012855?v=4", - "description": "CAT/BAT: tool for taxonomic classification of contigs and metagenome-assembled genomes (MAGs)", - "topics": [] - }, - { - "uid": "github/ruggiero/clustep", - "url": "https://github.com/ruggiero/clustep", - "rel": "/software/repository/github/ruggiero/clustep", - "avatar": "https://avatars.githubusercontent.com/u/4472476?v=4", - "description": "Generates initial conditions for a galaxy cluster halo simulation in a format that can be read in GADGET2 or RAMSES.", + "uid": "github/SciOmicsLab/PhenoComb", + "url": "https://github.com/SciOmicsLab/PhenoComb", + "rel": "/software/repository/github/SciOmicsLab/PhenoComb", + "avatar": "https://avatars.githubusercontent.com/u/69360691?v=4", + "description": "An R package for combinatorial analysis of phenotypes", "topics": [] }, { - "uid": "github/ruggiero/galstep", - "url": "https://github.com/ruggiero/galstep", - "rel": "/software/repository/github/ruggiero/galstep", - "avatar": "https://avatars.githubusercontent.com/u/4472476?v=4", - "description": "Generates initial conditions for a spiral galaxy simulation in a format that can be read in GADGET2 or RAMSES, or alternatively in the HDF5 format.", + "uid": "github/epfl-radio-astro/PINION", + "url": "https://github.com/epfl-radio-astro/PINION", + "rel": "/software/repository/github/epfl-radio-astro/PINION", + "avatar": "https://avatars.githubusercontent.com/u/100411188?v=4", + "description": "A featherweight EoR simulation", "topics": [] }, { - "uid": "github/AnthonyOfSeattle/pyAscoreValidation", - "url": "https://github.com/AnthonyOfSeattle/pyAscoreValidation", - "rel": "/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", - "avatar": "https://avatars.githubusercontent.com/u/33529904?v=4", - "description": "Validation experiments for the pyAscore python package.", + "uid": "github/epfl-radio-astro/LiSA", + "url": "https://github.com/epfl-radio-astro/LiSA", + "rel": "/software/repository/github/epfl-radio-astro/LiSA", + "avatar": "https://avatars.githubusercontent.com/u/100411188?v=4", + "description": "Lightweight Source finding Algorithms", "topics": [] }, { - "uid": "github/ryanvarley/exodata", - "url": "https://github.com/ryanvarley/ExoData", - "rel": "/software/repository/github/ryanvarley/exodata", - "avatar": "https://avatars.githubusercontent.com/u/1278326?v=4", - "description": "Exoplanet catalogue interface and exploratory analysis tool", + "uid": "github/mpound/pdrtpy", + "url": "https://github.com/mpound/pdrtpy", + "rel": "/software/repository/github/mpound/pdrtpy", + "avatar": "https://avatars.githubusercontent.com/u/22331890?v=4", + "description": "PhotoDissociation Region Toolbox Python module", "topics": [] }, { - "uid": "github/bmvdgeijn/WASP", - "url": "https://github.com/bmvdgeijn/WASP", - "rel": "/software/repository/github/bmvdgeijn/WASP", - "avatar": "https://avatars.githubusercontent.com/u/3441538?v=4", - "description": "WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery", + "uid": "github/mpound/comb", + "url": "https://github.com/mpound/comb", + "rel": "/software/repository/github/mpound/comb", + "avatar": "https://avatars.githubusercontent.com/u/22331890?v=4", + "description": "The AT&T Bell labs singledish radio astronomy data reduction package", "topics": [] }, { - "uid": "github/milnus/Corekaburra", - "url": "https://github.com/milnus/Corekaburra", - "rel": "/software/repository/github/milnus/Corekaburra", - "avatar": "https://avatars.githubusercontent.com/u/44769523?v=4", - "description": "Program to find core gene consensus synteny, hotspots between these, and construct spatially aware multiple sequence alignments of core genes ", + "uid": "github/snfactory/binaryoffset", + "url": "https://github.com/snfactory/binaryoffset", + "rel": "/software/repository/github/snfactory/binaryoffset", + "avatar": "https://avatars.githubusercontent.com/u/10949696?v=4", + "description": "Detecting and Correcting the Binary Offset Effect in CCDs", "topics": [] }, { - "uid": "github/milnus/Magphi", - "url": "https://github.com/milnus/Magphi", - "rel": "/software/repository/github/milnus/Magphi", - "avatar": "https://avatars.githubusercontent.com/u/44769523?v=4", - "description": "Tool intended to pull out sequences and annotations between insertion sites specified by the user.", - "topics": [ - "insertion-sites", - "annotations", - "mobile-genetic-elements", - "bacterial-genomes", - "prokaryotic-genomes" - ] - }, - { - "uid": "github/thomaspinder/GPJax", - "url": "https://github.com/thomaspinder/GPJax", - "rel": "/software/repository/github/thomaspinder/GPJax", - "avatar": "https://avatars.githubusercontent.com/u/20796877?v=4", - "description": "A didactic Gaussian process package for researchers in Jax.", + "uid": "github/schochastics/graphlayouts", + "url": "https://github.com/schochastics/graphlayouts", + "rel": "/software/repository/github/schochastics/graphlayouts", + "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", + "description": "new layout algorithms for network visualizations in R", "topics": [ - "gaussian-processes", - "jax", - "probabilistic-programming", - "bayesian-inference", - "machine-learning" + "ggraph", + "r", + "graph-algorithms", + "network-analysis", + "network-visualization" ] }, { - "uid": "github/AdmiralenOla/Scoary", - "url": "https://github.com/AdmiralenOla/Scoary", - "rel": "/software/repository/github/AdmiralenOla/Scoary", - "avatar": "https://avatars.githubusercontent.com/u/14874487?v=4", - "description": "Pan-genome wide association studies", + "uid": "github/schochastics/netrankr", + "url": "https://github.com/schochastics/netrankr", + "rel": "/software/repository/github/schochastics/netrankr", + "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", + "description": "An R package for network centrality", "topics": [ - "gene-presence-absence", - "gwas", - "pan-genome", - "bacteria", - "genomics" + "network-analysis", + "r-package", + "network-centrality" ] }, { - "uid": "github/metagenopolis/CroCoDeEL", - "url": "https://github.com/metagenopolis/CroCoDeEL", - "rel": "/software/repository/github/metagenopolis/CroCoDeEL", - "avatar": "https://avatars.githubusercontent.com/u/150909814?v=4", - "description": "CroCoDeEL is a tool that detects cross-sample contamination in shotgun metagenomic data", + "uid": "github/schochastics/signnet", + "url": "https://github.com/schochastics/signnet", + "rel": "/software/repository/github/schochastics/signnet", + "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", + "description": "R package for signed networks", "topics": [ - "contamination-detection", - "metagenomics", - "quality-control" + "sna", + "network-analysis", + "signed-networks" ] }, { - "uid": "github/konfound-project/konfound", - "url": "https://github.com/konfound-project/konfound", - "rel": "/software/repository/github/konfound-project/konfound", - "avatar": "https://avatars.githubusercontent.com/u/108297920?v=4", - "description": "R package for carrying out sensitivity analysis", + "uid": "github/pcingola/SnpEff", + "url": "https://github.com/pcingola/SnpEff", + "rel": "/software/repository/github/pcingola/SnpEff", + "avatar": "https://avatars.githubusercontent.com/u/1334427?v=4", + "description": "genetic variant annotation and effect prediction toolbox - tool", "topics": [] }, { - "uid": "github/pepamengual/UEP", - "url": "https://github.com/pepamengual/UEP", - "rel": "/software/repository/github/pepamengual/UEP", - "avatar": "https://avatars.githubusercontent.com/u/31403723?v=4", - "description": null, + "uid": "github/surf-eds/one-button-compute", + "url": "https://github.com/surf-eds/one-button-compute", + "rel": "/software/repository/github/surf-eds/one-button-compute", + "avatar": "https://avatars1.githubusercontent.com/u/14886505?v=4", + "description": "Web API for dynamic compute", "topics": [] }, { - "uid": "github/jupyter/notebook", - "url": "https://github.com/jupyter/notebook", - "rel": "/software/repository/github/jupyter/notebook", - "avatar": "https://avatars1.githubusercontent.com/u/7388996?v=4", - "description": "Jupyter Interactive Notebook", - "topics": [] + "uid": "github/SuperKogito/spafe", + "url": "https://github.com/SuperKogito/spafe", + "rel": "/software/repository/github/SuperKogito/spafe", + "avatar": "https://avatars.githubusercontent.com/u/15731839?v=4", + "description": ":sound: spafe: Simplified Python Audio Features Extraction", + "topics": [ + "python", + "dsp", + "audio", + "music", + "audio-analysis", + "music-information-retrieval", + "features-extraction", + "mfcc", + "filterbank", + "signal-processing", + "frequency", + "frequency-analysis", + "time-frequency-analysis", + "frequencies", + "voice", + "sound", + "beat", + "pitch", + "speech-processing", + "gammatone-filterbanks" + ] }, { - "uid": "github/bbuchfink/diamond", - "url": "https://github.com/bbuchfink/diamond", - "rel": "/software/repository/github/bbuchfink/diamond", - "avatar": "https://avatars.githubusercontent.com/u/10001338?v=4", - "description": "Accelerated BLAST compatible local sequence aligner.", + "uid": "github/mehdirezaie/SYSNet", + "url": "https://github.com/mehdirezaie/SYSNet", + "rel": "/software/repository/github/mehdirezaie/SYSNet", + "avatar": "https://avatars.githubusercontent.com/u/15114808?v=4", + "description": "End-to-End pipeline for Neural Network modeling of imaging systematics in Galaxy Surveys", "topics": [ - "sequence-alignment" + "neural-networks", + "galaxy-survey", + "big-data" ] }, { - "uid": "github/TabeaSonnenschein/CellAutDisp", - "url": "https://github.com/TabeaSonnenschein/CellAutDisp", - "rel": "/software/repository/github/TabeaSonnenschein/CellAutDisp", - "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", - "description": null, + "uid": "github/NathanSandford/Chem-I-Calc", + "url": "https://github.com/NathanSandford/Chem-I-Calc", + "rel": "/software/repository/github/NathanSandford/Chem-I-Calc", + "avatar": "https://avatars.githubusercontent.com/u/36717682?v=4", + "description": "Chemical information calculator for resolved stellar spectroscopy", "topics": [] }, { - "uid": "github/TabeaSonnenschein/UrbHealth-ABM", - "url": "https://github.com/TabeaSonnenschein/UrbHealth-ABM", - "rel": "/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", - "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", - "description": null, - "topics": [] + "uid": "github/exoclim/aeolus", + "url": "https://github.com/exoclim/aeolus", + "rel": "/software/repository/github/exoclim/aeolus", + "avatar": "https://avatars.githubusercontent.com/u/43474110?v=4", + "description": "Analysis and visualisation of atmospheric model output powered by iris.", + "topics": [ + "python-library", + "atmospheric-science", + "planetary-science", + "exoplanets", + "atmospheric-modelling", + "climate-model" + ] }, { - "uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", - "url": "https://github.com/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", - "rel": "/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", - "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", - "description": "This repository contains the codes required for building a spatial agent based model of urban health interventions.", + "uid": "github/mendezVKI/MODULO", + "url": "https://github.com/mendezVKI/MODULO", + "rel": "/software/repository/github/mendezVKI/MODULO", + "avatar": "https://avatars.githubusercontent.com/u/52033190?v=4", + "description": "MODULO (MODal mULtiscale pOd) is a software developed at the von Karman Institute to perform Multiscale Modal Analysis of numerical and experimental data using the mPOD. ", "topics": [] }, { - "uid": "github/TabeaSonnenschein/GenSynthPop", - "url": "https://github.com/TabeaSonnenschein/GenSynthPop", - "rel": "/software/repository/github/TabeaSonnenschein/GenSynthPop", - "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", - "description": "This package contains a set of functions that help create a spatially explicit synthetic population based on spatial marginal datasets and the stratified datasets, as most census provide.", + "uid": "github/QZH2022/germline_flow", + "url": "https://github.com/QZH2022/germline_flow", + "rel": "/software/repository/github/QZH2022/germline_flow", + "avatar": "https://avatars.githubusercontent.com/u/97078565?v=4", + "description": null, "topics": [] }, { - "uid": "github/cobilab/RFSC", - "url": "https://github.com/cobilab/RFSC", - "rel": "/software/repository/github/cobilab/RFSC", - "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", - "description": "Reference-Free Sequence Classification Tool for DNA sequences in metagenomic samples", + "uid": "github/christophuv/PeakBot_example", + "url": "https://github.com/christophuv/PeakBot_Example", + "rel": "/software/repository/github/christophuv/PeakBot_example", + "avatar": "https://avatars.githubusercontent.com/u/78472147?v=4", + "description": "Example scripts on how to use PeakBot", "topics": [] }, { - "uid": "github/cobilab/OptimJV3", - "url": "https://github.com/cobilab/OptimJV3", - "rel": "/software/repository/github/cobilab/OptimJV3", - "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", - "description": "Optimize compression parameters of Jarvis3", + "uid": "github/csiro-risk-assessment/mozzie", + "url": "https://github.com/csiro-risk-assessment/mozzie", + "rel": "/software/repository/github/csiro-risk-assessment/mozzie", + "avatar": "https://avatars.githubusercontent.com/u/180230676?v=4", + "description": "Mosquito lifecycle, diffusion and advection", "topics": [] }, { - "uid": "github/cobilab/altair", - "url": "https://github.com/cobilab/altair", - "rel": "/software/repository/github/cobilab/altair", - "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", - "description": "AltaiR: a C toolkit for alignment-free and spatial-temporal analysis of multi-FASTA data", + "uid": "github/TORCH-Consortium/MAGMA", + "url": "https://github.com/TORCH-Consortium/MAGMA", + "rel": "/software/repository/github/TORCH-Consortium/MAGMA", + "avatar": "https://avatars.githubusercontent.com/u/101628119?v=4", + "description": "A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research", "topics": [ - "alignment-free", - "spatial-temportal", - "toolkit", - "data-analysis" + "genomics", + "pipeline", + "mycobacterium-tuberculosis", + "tuberculosis", + "nextflow-pipeline", + "nextflow" ] }, { - "uid": "github/purmortal/galcraft", - "url": "https://github.com/purmortal/galcraft", - "rel": "/software/repository/github/purmortal/galcraft", - "avatar": "https://avatars.githubusercontent.com/u/53634598?v=4", - "description": "Mocking IFS data cube of the Milky Way", + "uid": "github/markur4/plotastic", + "url": "https://github.com/markur4/plotastic", + "rel": "/software/repository/github/markur4/plotastic", + "avatar": "https://avatars.githubusercontent.com/u/98951648?v=4", + "description": "Streamlining statistical analysis by using plotting keywords in Python.", + "topics": [ + "anova", + "data-analysis", + "data-science", + "data-visualization", + "hypothesis-testing", + "matplotlib", + "omnibus", + "pairwise-testing", + "pingouin", + "plotting", + "python", + "seaborn", + "statistical-tests", + "statistics", + "ttest", + "user-friendly" + ] + }, + { + "uid": "github/dgerosa/spops", + "url": "https://github.com/dgerosa/spops", + "rel": "/software/repository/github/dgerosa/spops", + "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", + "description": "Spinning black-hole binary POPulation Synthesis", "topics": [] }, { - "uid": "github/ebellm/pyraf-dbsp", - "url": "https://github.com/ebellm/pyraf-dbsp", - "rel": "/software/repository/github/ebellm/pyraf-dbsp", - "avatar": "https://avatars.githubusercontent.com/u/733983?v=4", - "description": " :telescope: A PyRAF-based reduction pipeline for spectra taken with the Palomar 200-inch Double Spectrograph.", + "uid": "github/dgerosa/gwdet", + "url": "https://github.com/dgerosa/gwdet", + "rel": "/software/repository/github/dgerosa/gwdet", + "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", + "description": "Detectability of gravitational-wave signals from compact binary coalescences", "topics": [] }, { - "uid": "github/pierrepo/autoclassweb", - "url": "https://github.com/pierrepo/autoclassweb", - "rel": "/software/repository/github/pierrepo/autoclassweb", - "avatar": "https://avatars2.githubusercontent.com/u/733861?v=4", - "description": "AutoClassWeb: a web app to run AutoClass C Bayesian clustering :package: :rocket:", + "uid": "github/dgerosa/surrkick", + "url": "https://github.com/dgerosa/surrkick", + "rel": "/software/repository/github/dgerosa/surrkick", + "avatar": "https://avatars.githubusercontent.com/u/7237041?v=4", + "description": "Black-hole kicks from numerical-relativity surrogate models", "topics": [] }, { - "uid": "github/guillochon/MOSFiT", - "url": "https://github.com/guillochon/MOSFiT", - "rel": "/software/repository/github/guillochon/MOSFiT", - "avatar": "https://avatars.githubusercontent.com/u/4998058?v=4", - "description": "Modular Open Source Fitter for Transients", - "topics": [ - "astronomy", - "python", - "supernovae", - "transients" - ] + "uid": "github/mpc-bioinformatics/CalibraCurve", + "url": "https://github.com/mpc-bioinformatics/CalibraCurve", + "rel": "/software/repository/github/mpc-bioinformatics/CalibraCurve", + "avatar": "https://avatars1.githubusercontent.com/u/6215764?v=4", + "description": "CalibraCurve", + "topics": [] }, { - "uid": "github/DamynChipman/EllipticForest", - "url": "https://github.com/DamynChipman/EllipticForest", - "rel": "/software/repository/github/DamynChipman/EllipticForest", - "avatar": "https://avatars.githubusercontent.com/u/26394601?v=4", - "description": "A Direct Solver for Elliptic Partial Differential Equations on a Forest of Quadtree Meshes", + "uid": "github/cosmostat/pmclib", + "url": "https://github.com/CosmoStat/pmclib", + "rel": "/software/repository/github/cosmostat/pmclib", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Population Monte Carlo (PMC) library", "topics": [] }, { - "uid": "github/DEIB-GECO/CRIS_single-sample", - "url": "https://github.com/DEIB-GECO/CRIS_single-sample", - "rel": "/software/repository/github/DEIB-GECO/CRIS_single-sample", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "Single-sample classifiers for CRIS on colorectal cancer data", - "topics": [ - "bioinformatics", - "oncogenomics" - ] + "uid": "github/cosmostat/CosmoPMC", + "url": "https://github.com/CosmoStat/CosmoPMC", + "rel": "/software/repository/github/cosmostat/CosmoPMC", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Cosmology sampling with Population Monte Carlo (PMC)", + "topics": [] }, { - "uid": "github/DEIB-GECO/VarSum", - "url": "https://github.com/DEIB-GECO/VarSum", - "rel": "/software/repository/github/DEIB-GECO/VarSum", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "Data summarization tool for 1000 Genomes Project data", + "uid": "github/cosmostat/nicaea", + "url": "https://github.com/CosmoStat/nicaea", + "rel": "/software/repository/github/cosmostat/nicaea", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Numerical routines to calculate cosmology and weak-lensing quantities.", "topics": [] }, { - "uid": "github/DEIB-GECO/OpenGDC", - "url": "https://github.com/DEIB-GECO/OpenGDC", - "rel": "/software/repository/github/DEIB-GECO/OpenGDC", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "An open-source Java tool to automatically extract and convert all clinical and genomic data from the Genomic Data Commons to BED, GTF, CSV, and JSON format", + "uid": "github/xavierdidelot/clonalorigin", + "url": "https://github.com/xavierdidelot/ClonalOrigin", + "rel": "/software/repository/github/xavierdidelot/clonalorigin", + "avatar": "https://avatars.githubusercontent.com/u/11612608?v=4", + "description": "Inference of homologous recombination in bacteria using whole genome sequences", "topics": [] }, { - "uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", - "url": "https://github.com/DEIB-GECO/BC_Intrinsic_subtyping", - "rel": "/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": null, + "uid": "github/xavierdidelot/ClonalFrameML", + "url": "https://github.com/xavierdidelot/ClonalFrameML", + "rel": "/software/repository/github/xavierdidelot/ClonalFrameML", + "avatar": "https://avatars.githubusercontent.com/u/11612608?v=4", + "description": "ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes", "topics": [] }, { - "uid": "github/DEIB-GECO/CombSAFE", - "url": "https://github.com/DEIB-GECO/CombSAFE", - "rel": "/software/repository/github/DEIB-GECO/CombSAFE", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "Combinatorial and Semantic Analysis of Functional Elements", + "uid": "github/martin3141/spant", + "url": "https://github.com/martin3141/spant", + "rel": "/software/repository/github/martin3141/spant", + "avatar": "https://avatars.githubusercontent.com/u/7724002?v=4", + "description": "Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data", "topics": [ - "epigenetics", - "semantic-annotation", - "big-data-analysis", - "chromatin-state" + "cran", + "mrs", + "spectroscopy", + "mri", + "brain", + "mrshub" ] }, { - "uid": "github/DEIB-GECO/flu-warning-system", - "url": "https://github.com/DEIB-GECO/flu-warning-system", - "rel": "/software/repository/github/DEIB-GECO/flu-warning-system", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": null, - "topics": [] + "uid": "github/PathwayCommons/grounding-search", + "url": "https://github.com/PathwayCommons/grounding-search", + "rel": "/software/repository/github/PathwayCommons/grounding-search", + "avatar": "https://avatars.githubusercontent.com/u/1605506?v=4", + "description": "A biological entity grounding search service ", + "topics": [ + "grounding", + "identifiers", + "search", + "biological-entities" + ] }, { - "uid": "github/DEIB-GECO/GeneNetFusion", - "url": "https://github.com/DEIB-GECO/GeneNetFusion", - "rel": "/software/repository/github/DEIB-GECO/GeneNetFusion", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": null, + "uid": "github/EpiVec/TDLM", + "url": "https://github.com/EpiVec/TDLM", + "rel": "/software/repository/github/EpiVec/TDLM", + "avatar": "https://avatars.githubusercontent.com/u/123465323?v=4", + "description": ":package: Systematic comparison of trip distribution laws and models", "topics": [ - "co-expression", - "complex-networks", - "gene-network-inference", - "gene-expression-profiles", - "network-fusion", - "biomarkers" + "r", + "r-package" ] }, { - "uid": "github/DEIB-GECO/MutViz", - "url": "https://github.com/DEIB-GECO/MutViz", - "rel": "/software/repository/github/DEIB-GECO/MutViz", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "MutViz - Analysis and Visualization of Mutation Enrichments for Selected Genomic Regions and Cancer Types", - "topics": [] + "uid": "github/ryokbys/nap", + "url": "https://github.com/ryokbys/nap", + "rel": "/software/repository/github/ryokbys/nap", + "avatar": "https://avatars.githubusercontent.com/u/6027630?v=4", + "description": "Nagoya Atomistic-simulation Package (NAP). Why don't you take a NAP? ;)", + "topics": [ + "molecular-dynamics", + "neural-network", + "atomistic-simulations" + ] }, { - "uid": "github/DEIB-GECO/ReRa", - "url": "https://github.com/DEIB-GECO/ReRa", - "rel": "/software/repository/github/DEIB-GECO/ReRa", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "Supervised Relevance-Redundancy assessments for feature selection in omics-based classification", + "uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", + "url": "https://github.com/JuliaPOMDP/CompressedBeliefMDPs.jl", + "rel": "/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", + "avatar": "https://avatars.githubusercontent.com/u/16347008?v=4", + "description": "A Julia package for solving POMDPs with belief compression. Part of the POMDPs.jl community.", + "topics": [ + "artificial-intelligence", + "compression", + "dimensionality-reduction", + "julia", + "markov-decision-processes", + "mdps", + "pomdps", + "reinforcement-learning" + ] + }, + { + "uid": "github/backyardworlds/wiseview", + "url": "https://github.com/backyardworlds/wiseview", + "rel": "/software/repository/github/backyardworlds/wiseview", + "avatar": "https://avatars.githubusercontent.com/u/25831678?v=4", + "description": "WiseView: Visualizing Motion and Variability of Faint WISE Sources", "topics": [] }, { - "uid": "github/DEIB-GECO/genereg", - "url": "https://github.com/DEIB-GECO/genereg", - "rel": "/software/repository/github/DEIB-GECO/genereg", - "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", - "description": "Python library for the analysis of gene expression regulation systems of genes of interest in TCGA cancers.", + "uid": "github/smithlabcode/dnmtools", + "url": "https://github.com/smithlabcode/dnmtools", + "rel": "/software/repository/github/smithlabcode/dnmtools", + "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", + "description": "Tools for analyzing DNA methylation data", "topics": [] }, { - "uid": "github/jbattat/pep_core", - "url": "https://github.com/jbattat/pep_core", - "rel": "/software/repository/github/jbattat/pep_core", - "avatar": "https://avatars.githubusercontent.com/u/8468957?v=4", - "description": "PEP: Planetary Ephemeris Program core files", + "uid": "github/smithlabcode/falco", + "url": "https://github.com/smithlabcode/falco", + "rel": "/software/repository/github/smithlabcode/falco", + "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", + "description": "A C++ drop-in replacement of FastQC to assess the quality of sequence read data", "topics": [] }, { - "uid": "github/mgieles/limepy", - "url": "https://github.com/mgieles/limepy", - "rel": "/software/repository/github/mgieles/limepy", - "avatar": "https://avatars.githubusercontent.com/u/2310401?v=4", - "description": "Lowered Isothermal Model Explorer in Python", + "uid": "github/smithlabcode/abismal", + "url": "https://github.com/smithlabcode/abismal", + "rel": "/software/repository/github/smithlabcode/abismal", + "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", + "description": "Abismal is a mapper of FASTQ bisulfite-converted short reads (between 50 and 1000 bases) to a FASTA reference genome.", + "topics": [ + "bioinformatics", + "bisulfite-sequencing", + "mapping-algorithms" + ] + }, + { + "uid": "github/smithlabcode/preseq", + "url": "https://github.com/smithlabcode/preseq", + "rel": "/software/repository/github/smithlabcode/preseq", + "avatar": "https://avatars.githubusercontent.com/u/7265986?v=4", + "description": "Software for predicting library complexity and genome coverage in high-throughput sequencing.", "topics": [] }, { - "uid": "github/KeplerGO/PyKE", - "url": "https://github.com/KeplerGO/pyke", - "rel": "/software/repository/github/KeplerGO/PyKE", - "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", - "description": "Easy command line tools for Kepler, K2 & TESS data analysis.", + "uid": "github/zavolanlab/PAQR2", + "url": "https://github.com/zavolanlab/PAQR2", + "rel": "/software/repository/github/zavolanlab/PAQR2", + "avatar": "https://avatars.githubusercontent.com/u/25588245?v=4", + "description": "Updated version of PAQR, which was previously available in the PAQR_KAPAC joint repository.", "topics": [ - "kepler", - "k2", - "tess", - "astrophysics" + "bioinformatics", + "snakemake", + "rna-seq-pipeline", + "polyadenylation" ] }, { - "uid": "github/KeplerGO/K2fov", - "url": "https://github.com/KeplerGO/K2fov", - "rel": "/software/repository/github/KeplerGO/K2fov", - "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", - "description": "Check whether targets are in the field of view of NASA's K2 space telescope", + "uid": "github/tvh0021/aweSOM", + "url": "https://github.com/tvh0021/aweSOM", + "rel": "/software/repository/github/tvh0021/aweSOM", + "avatar": "https://avatars.githubusercontent.com/u/72711330?v=4", + "description": "Accelerated Self-organizing Map (SOM) and Statistically Combined Ensemble (SCE)", "topics": [] }, { - "uid": "github/KeplerGO/kadenza", - "url": "https://github.com/KeplerGO/kadenza", - "rel": "/software/repository/github/KeplerGO/kadenza", - "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", - "description": "Converts raw cadence target data from the Kepler space telescope into astronomer-friendly FITS files.", + "uid": "github/AUTODIAL/AutoEIS", + "url": "https://github.com/AUTODIAL/AutoEIS", + "rel": "/software/repository/github/AUTODIAL/AutoEIS", + "avatar": "https://avatars.githubusercontent.com/u/90283960?v=4", + "description": "A tool for automated extraction of equivalent circuit models (ECM) from electrochemical impedance spectroscopy (EIS) data", "topics": [] }, { - "uid": "github/KeplerGO/k2mosaic", - "url": "https://github.com/KeplerGO/k2mosaic", - "rel": "/software/repository/github/KeplerGO/k2mosaic", - "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", - "description": "Mosaic Target Pixel Files (TPFs) obtained by NASA's Kepler/K2 missions into CCD-sized images and movies.", + "uid": "github/juzikong/photGalIMF", + "url": "https://github.com/juzikong/photGalIMF", + "rel": "/software/repository/github/juzikong/photGalIMF", + "avatar": "https://avatars.githubusercontent.com/u/20602290?v=4", + "description": "supplementary repository of the GalIMF galaxy chemical evolution code to calculate photometric luminosity of simulated galaxies", "topics": [] }, { - "uid": "github/OpenMDAO/dymos", - "url": "https://github.com/OpenMDAO/dymos", - "rel": "/software/repository/github/OpenMDAO/dymos", - "avatar": "https://avatars.githubusercontent.com/u/861615?v=4", - "description": "Open Source Optimization of Dynamic Multidisciplinary Systems", + "uid": "github/HITS-AIN/PINK", + "url": "https://github.com/HITS-AIN/PINK", + "rel": "/software/repository/github/HITS-AIN/PINK", + "avatar": "https://avatars.githubusercontent.com/u/40384418?v=4", + "description": "Parallelized rotation and flipping INvariant Kohonen maps", "topics": [ - "nasa", - "optimal-control", - "trajectory-optimization", - "pseudospectral", - "openmdao", - "co-design" + "kohonen-map", + "machine-learning", + "astronomical-algorithms", + "som", + "som-training", + "self-organizing-map" ] }, { - "uid": "github/ashleefv/ACEInhibPKPD", - "url": "https://github.com/ashleefv/ACEInhibPKPD", - "rel": "/software/repository/github/ashleefv/ACEInhibPKPD", - "avatar": "https://avatars.githubusercontent.com/u/12647990?v=4", - "description": "PKPD model for ACE inhibition; educational drug dosing app for treatment of high blood pressure", - "topics": [] - }, - { - "uid": "github/MCTwo/MCMAC", - "url": "https://github.com/MCTwo/MCMAC", - "rel": "/software/repository/github/MCTwo/MCMAC", - "avatar": "https://avatars.githubusercontent.com/u/3769419?v=4", - "description": "Monte Carlo Merger Analysis Code (MCMAC)", + "uid": "github/HITS-AIN/GPCC.jl", + "url": "https://github.com/HITS-AIN/GPCC.jl", + "rel": "/software/repository/github/HITS-AIN/GPCC.jl", + "avatar": "https://avatars.githubusercontent.com/u/40384418?v=4", + "description": "Gaussian process cross correlation", "topics": [] }, { - "uid": "github/danStich/dia", - "url": "https://github.com/danStich/dia", - "rel": "/software/repository/github/danStich/dia", - "avatar": "https://avatars.githubusercontent.com/u/36766897?v=4", - "description": "An R package for the National Oceanic and Atmospheric Administration dam impact analysis", + "uid": "github/hajimes/mmh3", + "url": "https://github.com/hajimes/mmh3", + "rel": "/software/repository/github/hajimes/mmh3", + "avatar": "https://avatars.githubusercontent.com/u/1262041?v=4", + "description": "Python extension for MurmurHash (MurmurHash3), a set of fast and robust hash functions.", "topics": [ - "dams", - "r-packages", - "fish", - "salmon", - "dam-impact-analysis", - "simulation" + "cpython", + "hash", + "murmurhash", + "python", + "murmurhash3" ] }, { - "uid": "github/csmsoftware/IMPaCTS", - "url": "https://github.com/csmsoftware/IMPaCTS", - "rel": "/software/repository/github/csmsoftware/IMPaCTS", - "avatar": "https://avatars.githubusercontent.com/u/8554835?v=4", - "description": "Imperial Metabolic Profiling and Chemometrics Toolbox for Spectroscopy", + "uid": "github/adrn/SuperFreq", + "url": "https://github.com/adrn/SuperFreq", + "rel": "/software/repository/github/adrn/SuperFreq", + "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", + "description": "Numerically determine the fundamental frequencies of an orbit", "topics": [] }, { - "uid": "github/EIT-ALIVE/eitprocessing", - "url": "https://github.com/EIT-ALIVE/eitprocessing", - "rel": "/software/repository/github/EIT-ALIVE/eitprocessing", - "avatar": "https://avatars.githubusercontent.com/u/128688874?v=4", - "description": "Software for electrical impedance tomography data loading, visualization and processing", - "topics": [] + "uid": "github/adrn/schwimmbad", + "url": "https://github.com/adrn/schwimmbad", + "rel": "/software/repository/github/adrn/schwimmbad", + "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", + "description": "A common interface to processing pools.", + "topics": [ + "multiprocessing", + "mpi", + "parallel-computing" + ] }, { - "uid": "github/mattwarkentin/openmpp", - "url": "https://github.com/mattwarkentin/openmpp", - "rel": "/software/repository/github/mattwarkentin/openmpp", - "avatar": "https://avatars.githubusercontent.com/u/27825069?v=4", - "description": "Programmatic interface to the OpenM++ microsimulation platform", - "topics": [] + "uid": "github/adrn/pyia", + "url": "https://github.com/adrn/pyia", + "rel": "/software/repository/github/adrn/pyia", + "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", + "description": "a Python package for working with data from the Gaia mission", + "topics": [ + "gaia", + "astronomy", + "data-structures", + "python" + ] }, { - "uid": "github/zhang-zhixiang/spectool", - "url": "https://github.com/zhang-zhixiang/spectool", - "rel": "/software/repository/github/zhang-zhixiang/spectool", - "avatar": "https://avatars.githubusercontent.com/u/12471308?v=4", - "description": "spectool is a collection of common reduction functions for spectroscopic data, providing tools for rebinning, smoothing, normalization, radial velocity measurement, and more.", - "topics": [] + "uid": "github/huiwenke/MineProt", + "url": "https://github.com/huiwenke/MineProt", + "rel": "/software/repository/github/huiwenke/MineProt", + "avatar": "https://avatars.githubusercontent.com/u/43511097?v=4", + "description": "Modern application for custom protein curation", + "topics": [ + "alphafold", + "protein", + "server", + "colabfold", + "protein-structure" + ] }, { - "uid": "github/zhang-zhixiang/stellarSpecModel", - "url": "https://github.com/zhang-zhixiang/stellarSpecModel", - "rel": "/software/repository/github/zhang-zhixiang/stellarSpecModel", - "avatar": "https://avatars.githubusercontent.com/u/12471308?v=4", - "description": "This is a simple package to interpolate the stellar spectral grid. Users provide a group of stellar parameters (Teff, FeH, logg), the package will return the corresponding stellar spectrum.", + "uid": "github/wajidarshad/ESIDE", + "url": "https://github.com/wajidarshad/ESIDE", + "rel": "/software/repository/github/wajidarshad/ESIDE", + "avatar": "https://avatars.githubusercontent.com/u/13540598?v=4", + "description": "Earthworm Species IDEntification", "topics": [] }, { - "uid": "github/supernnova/SuperNNova", - "url": "https://github.com/supernnova/SuperNNova", - "rel": "/software/repository/github/supernnova/SuperNNova", - "avatar": "https://avatars.githubusercontent.com/u/49273114?v=4", - "description": "Open Source Photometric classification https://supernnova.readthedocs.io", + "uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", + "url": "https://github.com/Rohit-Kundu/ET-NET_Covid-Detection", + "rel": "/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", + "avatar": "https://avatars.githubusercontent.com/u/80497999?v=4", + "description": "An Ensemble Transfer Learning Network for COVID-19 detection from lung CT-scan images.", "topics": [ - "cosmology", - "supernova", "deep-learning", - "arxiv", - "reproducible-science", - "recurrent-neural-networks", - "pandas", - "python", - "pytorch", - "bayesian-neural-networks", - "bayesian-deep-learning", - "bayesian-statistics" + "ensemble-learning", + "covid-19", + "ct-scan-images" ] }, { - "uid": "github/DyHealthNet/NApy", - "url": "https://github.com/DyHealthNet/NApy", - "rel": "/software/repository/github/DyHealthNet/NApy", - "avatar": "https://avatars.githubusercontent.com/u/160876211?v=4", - "description": "NApy: Efficient Statistics in Python for Large-Scale Heterogeneous Data with Enhanced Support for Missing Data", - "topics": [] + "uid": "github/PyPSA/linopy", + "url": "https://github.com/PyPSA/linopy", + "rel": "/software/repository/github/PyPSA/linopy", + "avatar": "https://avatars.githubusercontent.com/u/32890768?v=4", + "description": "Linear optimization with N-D labeled arrays in Python", + "topics": [ + "optimisation", + "python", + "optimization", + "xarray", + "cbc", + "gurobi", + "cplex", + "glpk", + "xpress", + "linear-optimization", + "linear-optimisation" + ] }, { - "uid": "github/yanliang-astro/aestra", - "url": "https://github.com/yanliang-astro/aestra", - "rel": "/software/repository/github/yanliang-astro/aestra", - "avatar": "https://avatars.githubusercontent.com/u/71669502?v=4", - "description": "AESTRA (Auto-Encoding STellar Radial-velocity and Activity) is a deep learning method for precise radial velocity measurements in the presence of stellar activity noise. ", + "uid": "github/PyPSA/atlite", + "url": "https://github.com/PyPSA/atlite", + "rel": "/software/repository/github/PyPSA/atlite", + "avatar": "https://avatars.githubusercontent.com/u/32890768?v=4", + "description": "Atlite: Light-weight version of Aarhus RE Atlas for converting weather data to power systems data", "topics": [] }, { - "uid": "github/spacetx/starfish", - "url": "https://github.com/spacetx/starfish", - "rel": "/software/repository/github/spacetx/starfish", - "avatar": "https://avatars.githubusercontent.com/u/37218549?v=4", - "description": "starfish: unified pipelines for image-based transcriptomics", + "uid": "github/guilledufort/EnanoFASTQ", + "url": "https://github.com/guilledufort/EnanoFASTQ", + "rel": "/software/repository/github/guilledufort/EnanoFASTQ", + "avatar": "https://avatars.githubusercontent.com/u/60487627?v=4", + "description": "A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.", "topics": [ - "transcriptomics", - "imaging", - "human-cell-atlas", - "python" + "nanopore-fastq-files", + "data-compression", + "bioinformatics", + "information-theory" ] }, { - "uid": "github/atchekho/harmpi", - "url": "https://github.com/atchekho/harmpi", - "rel": "/software/repository/github/atchekho/harmpi", - "avatar": "https://avatars.githubusercontent.com/u/8141298?v=4", - "description": "3D massively parallel general relativictic MHD code HARMPI", + "uid": "github/guilledufort/EMVC-2", + "url": "https://github.com/guilledufort/EMVC-2", + "rel": "/software/repository/github/guilledufort/EMVC-2", + "avatar": "https://avatars.githubusercontent.com/u/60487627?v=4", + "description": "An efficient SNV variant caller based on the expectation maximization algorithm. EMVC-2 is implemented in C and uses a python wrapper.", "topics": [] }, { - "uid": "github/BenMql/coral", - "url": "https://github.com/BenMql/coral", - "rel": "/software/repository/github/BenMql/coral", - "avatar": "https://avatars.githubusercontent.com/u/42280575?v=4", - "description": "Parallel spectral solver for partial differential equations in the plane layer geometry. ", + "uid": "github/oorb/oorb", + "url": "https://github.com/oorb/oorb", + "rel": "/software/repository/github/oorb/oorb", + "avatar": "https://avatars.githubusercontent.com/u/12908237?v=4", + "description": "An open-source orbit-computation package for Solar System objects.", "topics": [] }, { - "uid": "github/EnergyModelsX/EnergyModelsBase.jl", - "url": "https://github.com/EnergyModelsX/EnergyModelsBase.jl", - "rel": "/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", - "avatar": "https://avatars.githubusercontent.com/u/138767365?v=4", + "uid": "github/neeravkaushal/RIDs-in-WCDs", + "url": "https://github.com/neeravkaushal/RIDs-in-WCDs", + "rel": "/software/repository/github/neeravkaushal/RIDs-in-WCDs", + "avatar": "https://avatars.githubusercontent.com/u/48004241?v=4", "description": null, "topics": [] }, { - "uid": "github/ch-var/SMART", - "url": "https://github.com/ch-var/SMART", - "rel": "/software/repository/github/ch-var/SMART", - "avatar": "https://avatars.githubusercontent.com/u/155535455?v=4", - "description": "SMART (Spectral energy distributions Markov chain Analysis with Radiative Transfer models) is an open-source tool that implements a Bayesian Markov chain Monte Carlo (MCMC) method to fit the ultraviolet to millimetre spectral energy distributions (SEDs) of galaxies exclusively with radiative transfer models.", - "topics": [] - }, - { - "uid": "github/gianthk/ciclope", - "url": "https://github.com/gianthk/ciclope", - "rel": "/software/repository/github/gianthk/ciclope", - "avatar": "https://avatars.githubusercontent.com/u/15721147?v=4", - "description": "Computed Tomography to Finite Elements", + "uid": "github/thejasvibr/bat_beamshapes", + "url": "https://github.com/thejasvibr/bat_beamshapes", + "rel": "/software/repository/github/thejasvibr/bat_beamshapes", + "avatar": "https://avatars.githubusercontent.com/u/12443569?v=4", + "description": "Directivity functions for various sound sources", "topics": [ - "simulation", - "finite-elements", - "computed-tomography", - "python", - "engineering", - "biomechanics" + "acoustics", + "directivity", + "sound", + "beamshape", + "bioacoustics" ] }, { - "uid": "github/MAnalytics/opitools", - "url": "https://github.com/MAnalytics/opitools", - "rel": "/software/repository/github/MAnalytics/opitools", - "avatar": "https://avatars.githubusercontent.com/u/27354347?v=4", - "description": "An R-package for opinion analysis of social media data", - "topics": [] - }, - { - "uid": "github/MAnalytics/akmedoids", - "url": "https://github.com/MAnalytics/akmedoids", - "rel": "/software/repository/github/MAnalytics/akmedoids", - "avatar": "https://avatars1.githubusercontent.com/u/27354347?v=4", - "description": "akmedoids for longitudinal clustering", - "topics": [] - }, - { - "uid": "github/BlackHolePerturbationToolkit/KerrGeoPy", - "url": "https://github.com/BlackHolePerturbationToolkit/KerrGeoPy", - "rel": "/software/repository/github/BlackHolePerturbationToolkit/KerrGeoPy", - "avatar": "https://avatars.githubusercontent.com/u/28654934?v=4", - "description": "Python library for computing properties of stable and plunging orbits around a spinning black hole", + "uid": "github/tylunel/pvpumpingsystem", + "url": "https://github.com/tylunel/pvpumpingsystem", + "rel": "/software/repository/github/tylunel/pvpumpingsystem", + "avatar": "https://avatars3.githubusercontent.com/u/54322843?v=4", + "description": "Provides tools for modeling photovoltaic water pumping system", "topics": [] }, { - "uid": "github/zhongqiu1245/CCS-Net", - "url": "https://github.com/zhongqiu1245/CCS-Net", - "rel": "/software/repository/github/zhongqiu1245/CCS-Net", - "avatar": "https://avatars.githubusercontent.com/u/48090608?v=4", + "uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", + "url": "https://github.com/Wenxin-Wan/ephor_wp4_method_tutorial", + "rel": "/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", + "avatar": "https://avatars.githubusercontent.com/u/61091897?v=4", "description": null, "topics": [] }, { - "uid": "github/jwohlwend/boltz", - "url": "https://github.com/jwohlwend/boltz", - "rel": "/software/repository/github/jwohlwend/boltz", - "avatar": "https://avatars.githubusercontent.com/u/7190650?v=4", - "description": "Official repository for the Boltz biomolecular interaction models", + "uid": "github/Hi-COLACode/Hi-COLA", + "url": "https://github.com/Hi-COLACode/Hi-COLA", + "rel": "/software/repository/github/Hi-COLACode/Hi-COLA", + "avatar": "https://avatars.githubusercontent.com/u/125999519?v=4", + "description": "Hi-COLA simulates cosmological large-scale structure for a wide class of Horndeski theories. Built using a COLA solver forked from FML by HAWinther.", "topics": [] }, { - "uid": "github/kbarbary/sep", - "url": "https://github.com/kbarbary/sep", - "rel": "/software/repository/github/kbarbary/sep", - "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", - "description": "Python and C library for source extraction and photometry", + "uid": "github/OpenQuantumComputing/quantumreservoirpy", + "url": "https://github.com/OpenQuantumComputing/quantumreservoirpy", + "rel": "/software/repository/github/OpenQuantumComputing/quantumreservoirpy", + "avatar": "https://avatars.githubusercontent.com/u/60732936?v=4", + "description": "Some initial code for simple QRC examples on discrete states", "topics": [] }, { - "uid": "github/kbarbary/nestle", - "url": "https://github.com/kbarbary/nestle", - "rel": "/software/repository/github/kbarbary/nestle", - "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", - "description": "Pure Python, MIT-licensed implementation of nested sampling algorithms for evaluating Bayesian evidence.", - "topics": [ - "python", - "nested-sampling", - "bayesian-inference" - ] - }, - { - "uid": "github/kbarbary/extinction", - "url": "https://github.com/kbarbary/extinction", - "rel": "/software/repository/github/kbarbary/extinction", - "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", - "description": "Fast interstellar dust extinction laws in Python", + "uid": "github/profjsb/deepCR", + "url": "https://github.com/profjsb/deepCR", + "rel": "/software/repository/github/profjsb/deepCR", + "avatar": "https://avatars.githubusercontent.com/u/480799?v=4", + "description": "Deep Learning Based Cosmic Ray Removal for Astronomical Images", "topics": [ - "extinction", - "python" + "astronomy", + "deep-learning", + "pytorch", + "python3", + "convolutional-neural-networks", + "astronomical-images" ] }, { - "uid": "github/dkoboldt/varscan", - "url": "https://github.com/dkoboldt/varscan", - "rel": "/software/repository/github/dkoboldt/varscan", - "avatar": "https://avatars.githubusercontent.com/u/5421635?v=4", - "description": "Variant calling and somatic mutation/CNV detection for next-generation sequencing data", + "uid": "github/robdjeff/eagles", + "url": "https://github.com/robdjeff/eagles", + "rel": "/software/repository/github/robdjeff/eagles", + "avatar": "https://avatars.githubusercontent.com/u/104770145?v=4", + "description": "Estimating AGes from Lithium Equivalent widthS", "topics": [] }, { - "uid": "github/abmantz/lmc", - "url": "https://github.com/abmantz/lmc", - "rel": "/software/repository/github/abmantz/lmc", - "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", - "description": "Logarithmantic Monte Carlo", - "topics": [ - "monte-carlo", - "python", - "sampler" - ] - }, - { - "uid": "github/abmantz/lrgs", - "url": "https://github.com/abmantz/lrgs", - "rel": "/software/repository/github/abmantz/lrgs", - "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", - "description": "Code to perform multivariate linear regression using Gibbs sampling", - "topics": [ - "linear-regression", - "multivariate-regression", - "gibbs-sampler" - ] + "uid": "github/MickaelRigault/skysurvey", + "url": "https://github.com/MickaelRigault/skysurvey", + "rel": "/software/repository/github/MickaelRigault/skysurvey", + "avatar": "https://avatars.githubusercontent.com/u/7812822?v=4", + "description": "Simulate transients within the sky", + "topics": [] }, { - "uid": "github/abmantz/rgw", - "url": "https://github.com/abmantz/rgw", - "rel": "/software/repository/github/abmantz/rgw", - "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", - "description": "A lightweight R-language implementation of the affine-invariant sampling method of Goodman & Weare (2010)", - "topics": [ - "statistics", - "markov-chain-monte-carlo" - ] + "uid": "github/MickaelRigault/ztfquery", + "url": "https://github.com/MickaelRigault/ztfquery", + "rel": "/software/repository/github/MickaelRigault/ztfquery", + "avatar": "https://avatars.githubusercontent.com/u/7812822?v=4", + "description": "Access ZTF data from Python ", + "topics": [] }, { - "uid": "github/bregaldo/pywst", - "url": "https://github.com/bregaldo/pywst", - "rel": "/software/repository/github/bregaldo/pywst", - "avatar": "https://avatars.githubusercontent.com/u/30353945?v=4", - "description": "Python package for WST and RWST analyses of astrophysical data.", + "uid": "github/soleneulmer/bem", + "url": "https://github.com/soleneulmer/bem", + "rel": "/software/repository/github/soleneulmer/bem", + "avatar": "https://avatars.githubusercontent.com/u/16018533?v=4", + "description": "Random forest for exoplanets", "topics": [] }, { - "uid": "github/astropatel/twinkle", - "url": "https://github.com/astropatel/twinkle", - "rel": "/software/repository/github/astropatel/twinkle", - "avatar": "https://avatars.githubusercontent.com/u/3648312?v=4", - "description": "Calculate and plot spectral energy distribution of main-sequence stars with additional option of blackbody/greybody calculation from mid-IR excess", + "uid": "github/aviadpi/SparseBLS", + "url": "https://github.com/aviadpi/SparseBLS", + "rel": "/software/repository/github/aviadpi/SparseBLS", + "avatar": "https://avatars.githubusercontent.com/u/9414470?v=4", + "description": "BoxFitting Least Squares - Implementation for Sparse data", "topics": [] }, { - "uid": "github/zhangrengang/SubPhaser", - "url": "https://github.com/zhangrengang/SubPhaser", - "rel": "/software/repository/github/zhangrengang/SubPhaser", - "avatar": "https://avatars.githubusercontent.com/u/22489982?v=4", - "description": "Phase and visualize subgenomes of an allopolyploid or hybrid based on the repetitive kmers.", + "uid": "github/Glogobyte/miRGalaxy", + "url": "https://github.com/Glogobyte/miRGalaxy", + "rel": "/software/repository/github/Glogobyte/miRGalaxy", + "avatar": "https://avatars.githubusercontent.com/u/48248704?v=4", + "description": "miRGalaxy: a Galaxy\u2011based framework for interactive analysis of microRNA and isomiR sequencing data", "topics": [ - "allopolyploid", - "subgenome", - "phase", - "kmer" + "mirnas", + "isomirs", + "docker", + "galaxy" ] }, { - "uid": "github/EdwardBerman/shopt", - "url": "https://github.com/EdwardBerman/shopt", - "rel": "/software/repository/github/EdwardBerman/shopt", - "avatar": "https://avatars.githubusercontent.com/u/94378814?v=4", - "description": "Shear Optimization with ShOpt.jl, a julia package for empirical point spread function characterizations", + "uid": "github/predsci/hipft", + "url": "https://github.com/predsci/HipFT", + "rel": "/software/repository/github/predsci/hipft", + "avatar": "https://avatars.githubusercontent.com/u/8443402?v=4", + "description": "High-performance Flux Transport", "topics": [ - "astrophysics", - "julia", - "jwst", - "point-spread-function", - "weak-lensing" + "gpu", + "magnetogram", + "stdpar", + "flux-transport", + "do-concurrent", + "fortran", + "gpgpu", + "openmp", + "openmp-target", + "solar-physics", + "standard-parallelism" ] }, { - "uid": "github/kendomaniac/docker4seq", - "url": "https://github.com/kendomaniac/docker4seq", - "rel": "/software/repository/github/kendomaniac/docker4seq", - "avatar": "https://avatars2.githubusercontent.com/u/10886147?v=4", - "description": "Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.", - "topics": [] - }, - { - "uid": "github/kendomaniac/rCASC", - "url": "https://github.com/kendomaniac/rCASC", - "rel": "/software/repository/github/kendomaniac/rCASC", - "avatar": "https://avatars2.githubusercontent.com/u/10886147?v=4", - "description": "rCASC: reproducible Classification Analysis of Single Cell Sequencing Data", - "topics": [] - }, - { - "uid": "github/prolfqua/prolfquapp", - "url": "https://github.com/prolfqua/prolfquapp", - "rel": "/software/repository/github/prolfqua/prolfquapp", - "avatar": "https://avatars.githubusercontent.com/u/164514960?v=4", - "description": "Generating Dynamic DEA Reports with the prolfqua R Package", + "uid": "github/predsci/OFT", + "url": "https://github.com/predsci/OFT", + "rel": "/software/repository/github/predsci/OFT", + "avatar": "https://avatars.githubusercontent.com/u/8443402?v=4", + "description": "Open Source Flux Transport", "topics": [] }, { - "uid": "github/OnroerendErfgoed/atramhasis", - "url": "https://github.com/OnroerendErfgoed/atramhasis", - "rel": "/software/repository/github/OnroerendErfgoed/atramhasis", - "avatar": "https://avatars.githubusercontent.com/u/1157802?v=4", - "description": "An online SKOS editor", + "uid": "github/probml/dynamax", + "url": "https://github.com/probml/dynamax", + "rel": "/software/repository/github/probml/dynamax", + "avatar": "https://avatars.githubusercontent.com/u/6309387?v=4", + "description": "A Python package for probabilistic state space modeling with JAX", "topics": [ - "skos", + "state-space-models", + "hidden-markov-models", + "jax", "python", - "thesaurus", - "vocabulary", - "pypi-package" + "kalman-filter" ] }, { - "uid": "github/szwiep/py_SBeLT", - "url": "https://github.com/szwiep/py_SBeLT", - "rel": "/software/repository/github/szwiep/py_SBeLT", - "avatar": "https://avatars.githubusercontent.com/u/57023024?v=4", - "description": "A Markov-type numerical model of sediment particle transport in rivers", - "topics": [] - }, - { - "uid": "github/rega-cev/virulign", - "url": "https://github.com/rega-cev/virulign", - "rel": "/software/repository/github/rega-cev/virulign", - "avatar": "https://avatars.githubusercontent.com/u/6450884?v=4", - "description": "VIRULIGN: fast codon-correct alignment and annotation of viral genomes", + "uid": "github/OSS-Lab/ChemChaste", + "url": "https://github.com/OSS-Lab/ChemChaste", + "rel": "/software/repository/github/OSS-Lab/ChemChaste", + "avatar": "https://avatars.githubusercontent.com/u/7525127?v=4", + "description": null, "topics": [] }, { - "uid": "github/mjcarley/nbi", - "url": "https://github.com/mjcarley/nbi", - "rel": "/software/repository/github/mjcarley/nbi", - "avatar": "https://avatars.githubusercontent.com/u/36204194?v=4", - "description": "Nystrom Boundary Integral codes for Laplace and Helmholtz problems", + "uid": "github/DataIntellSystLab/KARGA", + "url": "https://github.com/DataIntellSystLab/KARGA", + "rel": "/software/repository/github/DataIntellSystLab/KARGA", + "avatar": "https://avatars.githubusercontent.com/u/59449016?v=4", + "description": "Multi-platform Toolkit for k-mer-based Antibiotic Resistance Gene Analysis of High-throughput Sequencing Data", "topics": [] }, { - "uid": "github/jan-rybizki/Galaxia_wrap", - "url": "https://github.com/jan-rybizki/Galaxia_wrap", - "rel": "/software/repository/github/jan-rybizki/Galaxia_wrap", - "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", - "description": "A few python scripts and a tutorial notebook to create and manipulate Galaxia mock catalogues", + "uid": "github/nathanael-fijalkow/DeepSynth", + "url": "https://github.com/nathanael-fijalkow/DeepSynth", + "rel": "/software/repository/github/nathanael-fijalkow/DeepSynth", + "avatar": "https://avatars.githubusercontent.com/u/7555483?v=4", + "description": "General-purpose program synthesiser", "topics": [] }, { - "uid": "github/jan-rybizki/Chempy", - "url": "https://github.com/jan-rybizki/Chempy", - "rel": "/software/repository/github/jan-rybizki/Chempy", - "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", - "description": "Start with the Chempy tutorial", - "topics": [ - "scientific-computations", - "astronomy", - "mcmc", - "tutorial" - ] - }, - { - "uid": "github/jan-rybizki/gdr2_completeness", - "url": "https://github.com/jan-rybizki/gdr2_completeness", - "rel": "/software/repository/github/jan-rybizki/gdr2_completeness", - "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", - "description": "This package helps with downloading GaiaDR2 data and gives approximate completeness maps over the sky and per G magntude bin. It also has a function to query the GDR2 RVS sample selection function.", + "uid": "github/folsomcp/specpolFlow", + "url": "https://github.com/folsomcp/specpolFlow", + "rel": "/software/repository/github/folsomcp/specpolFlow", + "avatar": "https://avatars.githubusercontent.com/u/26417587?v=4", + "description": "Tools and tutorials for the analysis of stellar spectropolarimetric observations.", "topics": [] }, { - "uid": "github/jtschindler/sculptor", - "url": "https://github.com/jtschindler/sculptor", - "rel": "/software/repository/github/jtschindler/sculptor", - "avatar": "https://avatars.githubusercontent.com/u/16090889?v=4", - "description": "Sculptor - Interactive modeling of (electromagnetic) astronomical spectra.", + "uid": "github/CouncilDataProject/speakerbox", + "url": "https://github.com/CouncilDataProject/speakerbox", + "rel": "/software/repository/github/CouncilDataProject/speakerbox", + "avatar": "https://avatars.githubusercontent.com/u/32205865?v=4", + "description": "Speakerbox: Fine-tune Audio Transformers for speaker identification.", "topics": [ - "lmfit", - "gui", - "sculptor", - "astronomy", - "astrophysics", - "spectroscopy" + "audio-classification", + "transformers", + "speaker-id", + "speaker-identification" ] }, { - "uid": "github/E3SM-Project/gdess", - "url": "https://github.com/E3SM-Project/gdess", - "rel": "/software/repository/github/E3SM-Project/gdess", - "avatar": "https://avatars.githubusercontent.com/u/7558558?v=4", - "description": "Tool for evaluating atmospheric carbon dioxide concentrations as simulated by Earth system models", + "uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", + "url": "https://github.com/CouncilDataProject/cookiecutter-cdp-deployment", + "rel": "/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", + "avatar": "https://avatars.githubusercontent.com/u/32205865?v=4", + "description": "Cookiecutter template for creating new CDP instances.", "topics": [ - "earth-system-model", - "model-diagnostics", - "earth-observation", - "python", - "data-visualization" + "cookiecutter-template", + "cdp-deployments", + "civic-tech", + "open-government", + "local-government", + "government-data", + "hacktoberfest" ] }, { - "uid": "github/Imperial-visualizations/Physics-Visualizations", - "url": "https://github.com/Imperial-visualizations/Physics-Visualizations", - "rel": "/software/repository/github/Imperial-visualizations/Physics-Visualizations", - "avatar": "https://avatars.githubusercontent.com/u/40570406?v=4", - "description": "A computational project at Imperial College London to develop interactive visualizations for education.", - "topics": [] - }, - { - "uid": "github/philippbaumeister/ExoMDN", - "url": "https://github.com/philippbaumeister/ExoMDN", - "rel": "/software/repository/github/philippbaumeister/ExoMDN", - "avatar": "https://avatars.githubusercontent.com/u/48733466?v=4", - "description": "Rapid characterization of exoplanet interiors with Mixture Density Networks", + "uid": "github/jmhuie/Slicer-SegmentGeometry", + "url": "https://github.com/jmhuie/Slicer-SegmentGeometry", + "rel": "/software/repository/github/jmhuie/Slicer-SegmentGeometry", + "avatar": "https://avatars.githubusercontent.com/u/52302862?v=4", + "description": "Extension to calculate second moment of area and other cross-sectional properties in 3D Slicer", "topics": [ - "deep-learning", - "exoplanet-classification", - "exoplanets", - "machine-learning", - "mixture-density-networks", - "planetary-science", - "python" + "3d-slicer-extension" ] }, { - "uid": "github/VasuLab/rgfrosh", - "url": "https://github.com/VasuLab/rgfrosh", - "rel": "/software/repository/github/VasuLab/rgfrosh", - "avatar": "https://avatars.githubusercontent.com/u/88801849?v=4", - "description": "A frozen shock solver for ideal and real gas equations of state.", + "uid": "github/Washington-University/CiftiLib", + "url": "https://github.com/Washington-University/CiftiLib", + "rel": "/software/repository/github/Washington-University/CiftiLib", + "avatar": "https://avatars.githubusercontent.com/u/1493901?v=4", + "description": "C++ Library for reading and writing CIFTI-2 and CIFTI-1 files", "topics": [ - "shock-tube", - "equation-of-state", - "numpy", - "python", - "ideal-gas", - "real-gas" + "c-plus-plus", + "cifti", + "nifti" ] }, { - "uid": "github/CosmoStat/shapepipe", - "url": "https://github.com/CosmoStat/shapepipe", - "rel": "/software/repository/github/CosmoStat/shapepipe", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Shape Measurement Pipeline", - "topics": [] - }, - { - "uid": "github/CosmoStat/score", - "url": "https://github.com/CosmoStat/score", - "rel": "/software/repository/github/CosmoStat/score", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Shape COnstraint REstoration", + "uid": "github/darrenjw/jax-smfsb", + "url": "https://github.com/darrenjw/jax-smfsb", + "rel": "/software/repository/github/darrenjw/jax-smfsb", + "avatar": "https://avatars.githubusercontent.com/u/1235734?v=4", + "description": "SMfSB code in JAX", "topics": [] }, { - "uid": "github/CosmoStat/Glimpse", - "url": "https://github.com/CosmoStat/Glimpse", - "rel": "/software/repository/github/CosmoStat/Glimpse", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Sparsity based weak lensing mass-mapping tool", + "uid": "github/WangLabTHU/DeSP", + "url": "https://github.com/WangLabTHU/DeSP", + "rel": "/software/repository/github/WangLabTHU/DeSP", + "avatar": "https://avatars.githubusercontent.com/u/66990292?v=4", + "description": "DNA-D2S: a systematic error simulation Model for DNA Data Storage channel", "topics": [] }, { - "uid": "github/CosmoStat/mccd", - "url": "https://github.com/CosmoStat/mccd", - "rel": "/software/repository/github/CosmoStat/mccd", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Multi-CCD data-driven PSF modelling", + "uid": "github/marinebon/obisindicators", + "url": "https://github.com/marinebon/obisindicators", + "rel": "/software/repository/github/marinebon/obisindicators", + "avatar": "https://avatars.githubusercontent.com/u/11562325?v=4", + "description": "R package for generating indicators from OBIS", "topics": [ - "python" + "biodiversity", + "marine", + "marine-biology", + "r" ] }, { - "uid": "github/pybamm-team/PyBaMM", - "url": "https://github.com/pybamm-team/PyBaMM", - "rel": "/software/repository/github/pybamm-team/PyBaMM", - "avatar": "https://avatars.githubusercontent.com/u/48961907?v=4", - "description": "Fast and flexible physics-based battery models in Python", - "topics": [ - "pybamm", - "battery-models", - "solvers", - "python", - "batteries", - "simulation" - ] + "uid": "github/soylentdeen/MoogStokes", + "url": "https://github.com/soylentdeen/MoogStokes", + "rel": "/software/repository/github/soylentdeen/MoogStokes", + "avatar": "https://avatars.githubusercontent.com/u/210195?v=4", + "description": "Artisanal Zeeman Radiative Transfer", + "topics": [] }, { - "uid": "github/pybamm-team/liionpack", - "url": "https://github.com/pybamm-team/liionpack", - "rel": "/software/repository/github/pybamm-team/liionpack", - "avatar": "https://avatars.githubusercontent.com/u/48961907?v=4", - "description": "A battery pack simulation tool that uses the PyBaMM framework", + "uid": "github/soylentdeen/CounterPoint", + "url": "https://github.com/soylentdeen/CounterPoint", + "rel": "/software/repository/github/soylentdeen/CounterPoint", + "avatar": "https://avatars.githubusercontent.com/u/210195?v=4", + "description": "Python Companion to MoogStokes", "topics": [] }, { - "uid": "github/LiuJJ0327/CCPE", - "url": "https://github.com/LiuJJ0327/CCPE", - "rel": "/software/repository/github/LiuJJ0327/CCPE", - "avatar": "https://avatars.githubusercontent.com/u/49144614?v=4", - "description": "Cell cycle pseudotome estimation for scRNA-seq data", - "topics": [] + "uid": "github/precice/micro-manager", + "url": "https://github.com/precice/micro-manager", + "rel": "/software/repository/github/precice/micro-manager", + "avatar": "https://avatars.githubusercontent.com/u/12561035?v=4", + "description": "A manager tool to facilitate two-scale coupling in multi-physics simulations using preCICE.", + "topics": [ + "coupling", + "macro-micro", + "multiphysics", + "multiscale", + "research-and-development" + ] }, { - "uid": "github/kmsurrao/reMASTERed", - "url": "https://github.com/kmsurrao/reMASTERed", - "rel": "/software/repository/github/kmsurrao/reMASTERed", - "avatar": "https://avatars.githubusercontent.com/u/35614246?v=4", - "description": "Calculate contributions to pseudo-Cl for maps with correlated masks, based on https://arxiv.org/abs/2302.05436", + "uid": "github/precice/aste", + "url": "https://github.com/precice/aste", + "rel": "/software/repository/github/precice/aste", + "avatar": "https://avatars.githubusercontent.com/u/12561035?v=4", + "description": "Artificial Solver Testing Environment", "topics": [] }, { - "uid": "github/RoryChenXY/DataRepExp_public", - "url": "https://github.com/RoryChenXY/DataRepExp_public", - "rel": "/software/repository/github/RoryChenXY/DataRepExp_public", - "avatar": "https://avatars.githubusercontent.com/u/30110719?v=4", - "description": "A shiny app that was developed to improve the FAIR of research data hosted on data repository.", + "uid": "github/Midnighter/dependency-info", + "url": "https://github.com/Midnighter/dependency-info", + "rel": "/software/repository/github/Midnighter/dependency-info", + "avatar": "https://avatars.githubusercontent.com/u/135653?v=4", + "description": "Retrieve and print Python package dependencies.", "topics": [] }, { - "uid": "github/dparkins/CosmoNest", - "url": "https://github.com/dparkins/CosmoNest", - "rel": "/software/repository/github/dparkins/CosmoNest", - "avatar": "https://avatars.githubusercontent.com/u/3622802?v=4", - "description": "Cosmological Nested Sampling (to be used with cosmomc)", + "uid": "github/dianna-ai/dianna", + "url": "https://github.com/dianna-ai/dianna", + "rel": "/software/repository/github/dianna-ai/dianna", + "avatar": "https://avatars.githubusercontent.com/u/79975160?v=4", + "description": "Deep Insight And Neural Network Analysis", "topics": [] }, { - "uid": "github/NiallJeffrey/DeepMass", - "url": "https://github.com/NiallJeffrey/DeepMass", - "rel": "/software/repository/github/NiallJeffrey/DeepMass", - "avatar": "https://avatars.githubusercontent.com/u/15345794?v=4", - "description": "Cosmological map inference with deep learning", + "uid": "github/bandframework/Taweret", + "url": "https://github.com/bandframework/Taweret", + "rel": "/software/repository/github/bandframework/Taweret", + "avatar": "https://avatars.githubusercontent.com/u/63761723?v=4", + "description": "Python package for Bayesian Model Mixing", "topics": [ - "deep-learning", - "tensorflow", - "python", - "cosmology" + "bayesian-model-mixing", + "bayesian-statistics", + "regression-trees" ] }, { - "uid": "github/NiallJeffrey/BornRaytrace", - "url": "https://github.com/NiallJeffrey/BornRaytrace", - "rel": "/software/repository/github/NiallJeffrey/BornRaytrace", - "avatar": "https://avatars.githubusercontent.com/u/15345794?v=4", - "description": "BornRaytrace: simulating weak gravitational lensing effects", + "uid": "github/damonge/CUTE", + "url": "https://github.com/damonge/CUTE", + "rel": "/software/repository/github/damonge/CUTE", + "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", + "description": "Correlation Utilities and Two-point Estimation", "topics": [] }, { - "uid": "github/tomasstolker/ARTES", - "url": "https://github.com/tomasstolker/ARTES", - "rel": "/software/repository/github/tomasstolker/ARTES", - "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", - "description": "Radiative transfer of polarized light in 3D exoplanet atmospheres", + "uid": "github/damonge/schNell", + "url": "https://github.com/damonge/schNell", + "rel": "/software/repository/github/damonge/schNell", + "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", + "description": "Fast calculation of N_ell for GW anisotropies", "topics": [] }, { - "uid": "github/tomasstolker/species", - "url": "https://github.com/tomasstolker/species", - "rel": "/software/repository/github/tomasstolker/species", - "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", - "description": "Toolkit for atmospheric characterization of directly imaged exoplanets", + "uid": "github/damonge/CoLoRe", + "url": "https://github.com/damonge/CoLoRe", + "rel": "/software/repository/github/damonge/CoLoRe", + "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", + "description": "CoLoRe - Cosmological Lofty Realizations", "topics": [] }, { - "uid": "github/tomasstolker/pycrires", - "url": "https://github.com/tomasstolker/pycrires", - "rel": "/software/repository/github/tomasstolker/pycrires", - "avatar": "https://avatars.githubusercontent.com/u/3204762?v=4", - "description": "Data reduction pipeline for VLT/CRIRES+", + "uid": "github/damonge/CRIME", + "url": "https://github.com/damonge/CRIME", + "rel": "/software/repository/github/damonge/CRIME", + "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", + "description": "Cosmological Realizations for Intensity Mapping Experiments", "topics": [] }, { - "uid": "github/PapenfussLab/gridss", - "url": "https://github.com/PapenfussLab/gridss", - "rel": "/software/repository/github/PapenfussLab/gridss", - "avatar": "https://avatars.githubusercontent.com/u/13462296?v=4", - "description": "GRIDSS: the Genomic Rearrangement IDentification Software Suite", + "uid": "github/DHortaD/Lux", + "url": "https://github.com/DHortaD/Lux", + "rel": "/software/repository/github/DHortaD/Lux", + "avatar": "https://avatars.githubusercontent.com/u/45667330?v=4", + "description": null, "topics": [] }, { - "uid": "github/PetroFit/petrofit", - "url": "https://github.com/PetroFit/petrofit", - "rel": "/software/repository/github/PetroFit/petrofit", - "avatar": "https://avatars.githubusercontent.com/u/80787894?v=4", - "description": "Package for calculating Petrosian properties and fitting galaxy light profiles", + "uid": "github/Open-Minds-Lab/MRdataset", + "url": "https://github.com/Open-Minds-Lab/MRdataset", + "rel": "/software/repository/github/Open-Minds-Lab/MRdataset", + "avatar": "https://avatars.githubusercontent.com/u/71519641?v=4", + "description": "MRdataset : unified interface to various neuroimaging dataset formats", "topics": [ - "petrosian", - "fitting", - "galfit", - "sersic", - "python", - "petrofit" + "neuroimaging", + "mri", + "neuroscience", + "quality-control", + "niqc" ] }, { - "uid": "github/tensorlayer/tensorlayer", - "url": "https://github.com/tensorlayer/TensorLayer", - "rel": "/software/repository/github/tensorlayer/tensorlayer", - "avatar": "https://avatars.githubusercontent.com/u/32261543?v=4", - "description": "Deep Learning and Reinforcement Learning Library for Scientists and Engineers ", - "topics": [ - "tensorlayer", - "deep-learning", - "tensorflow", - "neural-network", - "reinforcement-learning", - "artificial-intelligence", - "gan", - "a3c", - "tensorflow-tutorials", - "dqn", - "object-detection", - "chatbot", - "python", - "tensorflow-tutorial", - "imagenet", - "google" + "uid": "github/MICCoM/SSAGES-public", + "url": "https://github.com/SSAGESproject/SSAGES", + "rel": "/software/repository/github/MICCoM/SSAGES-public", + "avatar": "https://avatars.githubusercontent.com/u/22507151?v=4", + "description": "Software Suite for Advanced General Ensemble Simulations", + "topics": [ + "enhanced-sampling", + "collective-variables", + "lammps", + "gromacs", + "hoomd-blue", + "scientific-machine-learning", + "qbox", + "miccom" ] }, { - "uid": "github/DebduttaPaul/luminosity_function_of_lGRBs", - "url": "https://github.com/DebduttaPaul/luminosity_function_of_lGRBs", - "rel": "/software/repository/github/DebduttaPaul/luminosity_function_of_lGRBs", - "avatar": "https://avatars.githubusercontent.com/u/20395873?v=4", - "description": null, - "topics": [] + "uid": "github/saezlab/liana-py", + "url": "https://github.com/saezlab/liana-py", + "rel": "/software/repository/github/saezlab/liana-py", + "avatar": "https://avatars.githubusercontent.com/u/9979042?v=4", + "description": "LIANA+: an all-in-one framework for cell-cell communication", + "topics": [ + "cell-cell-communication", + "ligand-receptor", + "python", + "single-cell", + "single-cell-rna-seq", + "spatial", + "spatialomics" + ] }, { - "uid": "github/DebduttaPaul/luminosity_function_of_sGRBs", - "url": "https://github.com/DebduttaPaul/luminosity_function_of_sGRBs", - "rel": "/software/repository/github/DebduttaPaul/luminosity_function_of_sGRBs", - "avatar": "https://avatars.githubusercontent.com/u/20395873?v=4", - "description": "This is a repository containing databases and scripts for short GRB luminosity function work.", + "uid": "github/saezlab/PHONEMeS", + "url": "https://github.com/saezlab/PHONEMeS", + "rel": "/software/repository/github/saezlab/PHONEMeS", + "avatar": "https://avatars.githubusercontent.com/u/9979042?v=4", + "description": " PHONEMeS (PHOsphorylation NEtworks for Mass Spectrometry) is an R package to model signalling networks based on untargeted phosphoproteomics", "topics": [] }, { - "uid": "github/afarahi/tatter", - "url": "https://github.com/afarahi/tatter", - "rel": "/software/repository/github/afarahi/tatter", - "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", - "description": "TATTER (Two-sAmple TesT EstimatoR) is a tool to perform two-sample hypothesis test.", + "uid": "github/trevorgokey/besmarts", + "url": "https://github.com/trevorgokey/besmarts", + "rel": "/software/repository/github/trevorgokey/besmarts", + "avatar": "https://avatars.githubusercontent.com/u/50244806?v=4", + "description": "A toolkit for data-driven force field design based on binary-encoded SMARTS", "topics": [ - "kullback-leibler-divergence", - "mmd", - "two-sample-test", - "two-sample-statistics", - "posterior-predictive" + "cheminformatics", + "smarts", + "forcefields" ] }, { - "uid": "github/afarahi/PoPE", - "url": "https://github.com/afarahi/PoPE", - "rel": "/software/repository/github/afarahi/PoPE", - "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", - "description": "Population Profile Estimator", + "uid": "github/gogrean/PyXel", + "url": "https://github.com/gogrean/PyXel", + "rel": "/software/repository/github/gogrean/PyXel", + "avatar": "https://avatars.githubusercontent.com/u/6616486?v=4", + "description": "Package for modeling X-ray surface brightness profiles.", "topics": [] }, { - "uid": "github/afarahi/kllr", - "url": "https://github.com/afarahi/kllr", - "rel": "/software/repository/github/afarahi/kllr", - "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", - "description": "Kernel Localized Linear Regression (KLLR)", + "uid": "github/taoliu/MACS", + "url": "https://github.com/macs3-project/MACS", + "rel": "/software/repository/github/taoliu/MACS", + "avatar": "https://avatars.githubusercontent.com/u/66320751?v=4", + "description": "MACS -- Model-based Analysis of ChIP-Seq", "topics": [ - "linear-regression", - "linear-model", - "kernel-methods", - "regression", - "localized-linear-regression" + "chip-seq", + "atac-seq", + "dnase-seq", + "peak-caller", + "python", + "poisson-equation", + "macs" ] }, { - "uid": "github/stevengj/nlopt", - "url": "https://github.com/stevengj/nlopt", - "rel": "/software/repository/github/stevengj/nlopt", - "avatar": "https://avatars.githubusercontent.com/u/2913679?v=4", - "description": "library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization", + "uid": "github/Pithikos/C-Thread-Pool", + "url": "https://github.com/Pithikos/C-Thread-Pool", + "rel": "/software/repository/github/Pithikos/C-Thread-Pool", + "avatar": "https://avatars.githubusercontent.com/u/400048?v=4", + "description": "A minimal but powerful thread pool in ANSI C", "topics": [] }, { - "uid": "github/llrs/experDesign", - "url": "https://github.com/llrs/experDesign", - "rel": "/software/repository/github/llrs/experDesign", - "avatar": "https://avatars.githubusercontent.com/u/6818218?v=4", - "description": "Design experiments distributed in several batches", - "topics": [ - "experiment-design", - "batch", - "cran" - ] - }, - { - "uid": "github/nlesc-nano/flamingo", - "url": "https://github.com/nlesc-nano/flamingo", - "rel": "/software/repository/github/nlesc-nano/flamingo", - "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", - "description": "Computation and filtering of molecular properties", - "topics": [ - "quantum-chemistry", - "nanomaterials", - "insilico", - "molecular-simulation" - ] + "uid": "github/jgrembi/riskCommunicator", + "url": "https://github.com/jgrembi/riskCommunicator", + "rel": "/software/repository/github/jgrembi/riskCommunicator", + "avatar": "https://avatars.githubusercontent.com/u/7432315?v=4", + "description": "An R package for estimating risk differences and relative risk measures", + "topics": [] }, { - "uid": "github/nlesc-nano/insilico-server", - "url": "https://github.com/nlesc-nano/insilico-server", - "rel": "/software/repository/github/nlesc-nano/insilico-server", - "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", - "description": "web server to handle the properties", + "uid": "github/prmunday/Immunolyser", + "url": "https://github.com/prmunday/Immunolyser", + "rel": "/software/repository/github/prmunday/Immunolyser", + "avatar": "https://avatars.githubusercontent.com/u/39306066?v=4", + "description": null, "topics": [] }, { - "uid": "github/nlesc-nano/Moka", - "url": "https://github.com/nlesc-nano/Moka", - "rel": "/software/repository/github/nlesc-nano/Moka", - "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", - "description": "command line interface to compute and molecular properties from a database", + "uid": "github/NERC-CEH/RMAVIS", + "url": "https://github.com/NERC-CEH/RMAVIS", + "rel": "/software/repository/github/NERC-CEH/RMAVIS", + "avatar": "https://avatars.githubusercontent.com/u/5802506?v=4", + "description": "A R Shiny application for the assignment of vegetation survey plot data to GB NVC communities with additional exploratory analyses.", "topics": [] }, { - "uid": "github/nlesc-nano/ceiba-cli", - "url": "https://github.com/nlesc-nano/ceiba-cli", - "rel": "/software/repository/github/nlesc-nano/ceiba-cli", - "avatar": "https://avatars.githubusercontent.com/u/49066803?v=4", - "description": "command-line interface to compute and molecular properties from a database", + "uid": "github/JulioHC00/PEPITA", + "url": "https://github.com/JulioHC00/PEPITA", + "rel": "/software/repository/github/JulioHC00/PEPITA", + "avatar": "https://avatars.githubusercontent.com/u/81090346?v=4", + "description": "Prediction of Exoplanet Precisions using Information in Transit Analysis", "topics": [ - "command-line", - "web-service", - "client" + "data-science", + "exoplanets", + "transits" ] }, { - "uid": "github/nlesc-nano/ceiba", - "url": "https://github.com/nlesc-nano/ceiba", - "rel": "/software/repository/github/nlesc-nano/ceiba", - "avatar": "https://avatars.githubusercontent.com/u/49066803?v=4", - "description": "Web service to manage scientific simulation data", - "topics": [ - "scientific-computing", - "web-service", - "python", - "graphql", - "workflow-automation" - ] + "uid": "github/mbejger/polgraw-allsky", + "url": "https://github.com/mbejger/polgraw-allsky", + "rel": "/software/repository/github/mbejger/polgraw-allsky", + "avatar": "https://avatars.githubusercontent.com/u/514726?v=4", + "description": "All-sky search code (Polgraw group)", + "topics": [] }, { - "uid": "github/nlesc-nano/swan", - "url": "https://github.com/nlesc-nano/swan", - "rel": "/software/repository/github/nlesc-nano/swan", - "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", - "description": "Screening Workflows And statistical models to predict new materials", + "uid": "github/ANTsX/ANTs", + "url": "https://github.com/ANTsX/ANTs", + "rel": "/software/repository/github/ANTsX/ANTs", + "avatar": "https://avatars.githubusercontent.com/u/31454717?v=4", + "description": "Advanced Normalization Tools (ANTs) ", + "topics": [] + }, + { + "uid": "github/ml-evs/matador", + "url": "https://github.com/ml-evs/matador", + "rel": "/software/repository/github/ml-evs/matador", + "avatar": "https://avatars2.githubusercontent.com/u/7916000?v=4", + "description": "\u2697\ufe0f matador is an aggregator, manipulator and runner of first-principles calculations, written with a bent towards battery \ud83d\udd0b electrode materials.", "topics": [ - "material-science", - "quantum-chemistry", - "machine-learning", - "python" + "materials-science", + "python", + "computational-chemistry" ] }, { - "uid": "github/nlesc-nano/CAT", - "url": "https://github.com/nlesc-nano/CAT", - "rel": "/software/repository/github/nlesc-nano/CAT", - "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", - "description": "A collection of tools designed for the automatic construction, and subsequent analysis, of chemical compounds.", + "uid": "github/ks905383/xagg", + "url": "https://github.com/ks905383/xagg", + "rel": "/software/repository/github/ks905383/xagg", + "avatar": "https://avatars.githubusercontent.com/u/16925278?v=4", + "description": "Aggregating gridded data (xarray) to polygons", "topics": [ - "quantum-mechanics", - "science", - "chemistry", - "automation", - "scientific-workflows", - "python-3-7", - "molecular-mechanics", - "python-3-6", - "python-3-8" + "aggregation", + "polygon", + "python", + "raster-data", + "xarray" ] }, { - "uid": "github/SofieVG/FlowSOM", - "url": "https://github.com/SofieVG/FlowSOM", - "rel": "/software/repository/github/SofieVG/FlowSOM", - "avatar": "https://avatars.githubusercontent.com/u/1912811?v=4", - "description": "Using self-organizing maps for visualization and interpretation of cytometry data", + "uid": "github/martinghunt/ziplign", + "url": "https://github.com/martinghunt/ziplign", + "rel": "/software/repository/github/martinghunt/ziplign", + "avatar": "https://avatars.githubusercontent.com/u/4937411?v=4", + "description": "Simple-to-use interactive comparison of two bacterial genomes", "topics": [] }, { - "uid": "github/spicy-oil/hfs_fit", - "url": "https://github.com/spicy-oil/hfs_fit", - "rel": "/software/repository/github/spicy-oil/hfs_fit", - "avatar": "https://avatars.githubusercontent.com/u/55635165?v=4", - "description": null, + "uid": "github/sandmanns/CopyDetective", + "url": "https://github.com/sandmanns/CopyDetective", + "rel": "/software/repository/github/sandmanns/CopyDetective", + "avatar": "https://avatars2.githubusercontent.com/u/30867840?v=4", + "description": "Detection threshold aware CNV Calling in NGS data", "topics": [] }, { - "uid": "github/pw31/GGchem", - "url": "https://github.com/pw31/GGchem", - "rel": "/software/repository/github/pw31/GGchem", - "avatar": "https://avatars.githubusercontent.com/u/18750275?v=4", - "description": "fast thermo-chemical equilibrium code with or without equilibrium condensation down to 100K ", + "uid": "github/HDFGroup/hdf5", + "url": "https://github.com/HDFGroup/hdf5", + "rel": "/software/repository/github/HDFGroup/hdf5", + "avatar": "https://avatars.githubusercontent.com/u/8572050?v=4", + "description": "Official HDF5\u00ae Library Repository", "topics": [] }, { - "uid": "github/megbedell/wobble", - "url": "https://github.com/megbedell/wobble", - "rel": "/software/repository/github/megbedell/wobble", - "avatar": "https://avatars.githubusercontent.com/u/13722237?v=4", - "description": "precise data-driven RV fitting, now with tellurics!", - "topics": [ - "astronomy", - "spectroscopy", - "exoplanet-radial-velocities", - "tensorflow" - ] - }, - { - "uid": "github/cgre-aachen/gemgis", - "url": "https://github.com/cgre-aachen/gemgis", - "rel": "/software/repository/github/cgre-aachen/gemgis", - "avatar": "https://avatars.githubusercontent.com/u/29890754?v=4", - "description": "Spatial data processing for geomodeling", - "topics": [ - "spatial-data", - "processing", - "geographic", - "geographic-data", - "vector-data", - "raster-data", - "geomodeling", - "modeling", - "visualization", - "python", - "jupyter", - "jupyter-notebook", - "notebooks", - "geospatial" - ] - }, - { - "uid": "github/BackofenLab/IntaRNA", - "url": "https://github.com/BackofenLab/IntaRNA", - "rel": "/software/repository/github/BackofenLab/IntaRNA", - "avatar": "https://avatars.githubusercontent.com/u/15155517?v=4", - "description": "Efficient target prediction incorporating accessibility of interaction sites", + "uid": "github/jarvist/Julia-Phonons", + "url": "https://github.com/jarvist/Julia-Phonons", + "rel": "/software/repository/github/jarvist/Julia-Phonons", + "avatar": "https://avatars.githubusercontent.com/u/82852?v=4", + "description": "Julia codes to play with Phonons", "topics": [ - "bioinformatics", - "interaction", - "rna", - "structure", - "tool" + "phonopy", + "phonons" ] }, { - "uid": "github/BackofenLab/StoatyDive", - "url": "https://github.com/BackofenLab/StoatyDive", - "rel": "/software/repository/github/BackofenLab/StoatyDive", - "avatar": "https://avatars2.githubusercontent.com/u/15155517?v=4", + "uid": "github/stermzsofi/TiDE", + "url": "https://github.com/stermzsofi/TiDE", + "rel": "/software/repository/github/stermzsofi/TiDE", + "avatar": "https://avatars.githubusercontent.com/u/70320987?v=4", "description": null, "topics": [] }, { - "uid": "github/BackofenLab/Peakhood", - "url": "https://github.com/BackofenLab/Peakhood", - "rel": "/software/repository/github/BackofenLab/Peakhood", - "avatar": "https://avatars.githubusercontent.com/u/15155517?v=4", - "description": "Individual site context extraction for CLIP-Seq peak regions", + "uid": "github/KathrynJones1/catwoman", + "url": "https://github.com/KathrynJones1/catwoman", + "rel": "/software/repository/github/KathrynJones1/catwoman", + "avatar": "https://avatars3.githubusercontent.com/u/53044821?v=4", + "description": "A transit modelling Python package for asymmetric light curves", "topics": [] }, { - "uid": "github/arjunsavel/SImMER", - "url": "https://github.com/arjunsavel/SImMER", - "rel": "/software/repository/github/arjunsavel/SImMER", - "avatar": "https://avatars.githubusercontent.com/u/35353555?v=4", - "description": "An open-source & modular reduction pipeline for astronomical images of point sources.", + "uid": "github/networkx/networkx", + "url": "https://github.com/networkx/networkx", + "rel": "/software/repository/github/networkx/networkx", + "avatar": "https://avatars2.githubusercontent.com/u/388785?v=4", + "description": "Network Analysis in Python", "topics": [ - "astronomy", - "astrophysics", "python", - "astronomical-images", - "stars" + "complex-networks", + "graph-theory", + "graph-algorithms", + "graph-analysis", + "graph-generation", + "graph-visualization" ] }, { - "uid": "github/arjunsavel/cortecs", - "url": "https://github.com/arjunsavel/cortecs", - "rel": "/software/repository/github/arjunsavel/cortecs", - "avatar": "https://avatars.githubusercontent.com/u/35353555?v=4", - "description": "Compressed representations of opacity for radiative transfer!", + "uid": "github/bloch-labs/bloch", + "url": "https://github.com/bloch-labs/bloch", + "rel": "/software/repository/github/bloch-labs/bloch", + "avatar": "https://avatars.githubusercontent.com/u/225359926?v=4", + "description": "The Bloch Quantum Programming Language", "topics": [ - "astronomy", - "atmospheres", - "exoplanets", - "radiative-transfer" + "quantum", + "hybrid", + "programming-language", + "strongly-typed" ] }, { - "uid": "github/vidarsko/ComFiT", - "url": "https://github.com/vidarsko/ComFiT", - "rel": "/software/repository/github/vidarsko/ComFiT", - "avatar": "https://avatars.githubusercontent.com/u/8513212?v=4", - "description": "A python library for simulating field theories with topological defects", - "topics": [] - }, - { - "uid": "github/ZhangGroup-MITChemistry/OpenNucleome", - "url": "https://github.com/ZhangGroup-MITChemistry/OpenNucleome", - "rel": "/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", - "avatar": "https://avatars.githubusercontent.com/u/38541214?v=4", - "description": "OpenNucleome is an open-source software designed for conducting molecular dynamics (MD) simulations of the human nucleus. This software streamlines the process of setting up whole nucleus simulations through just a few lines of Python scripting.", + "uid": "github/eltevo/steps", + "url": "https://github.com/eltevo/StePS", + "rel": "/software/repository/github/eltevo/steps", + "avatar": "https://avatars.githubusercontent.com/u/12859392?v=4", + "description": "Stereographically Projected Cosmological Simulations", "topics": [] }, { - "uid": "github/EpiVec/TDLM", - "url": "https://github.com/EpiVec/TDLM", - "rel": "/software/repository/github/EpiVec/TDLM", - "avatar": "https://avatars.githubusercontent.com/u/123465323?v=4", - "description": ":package: Systematic comparison of trip distribution laws and models", + "uid": "github/scikit-learn-contrib/hdbscan", + "url": "https://github.com/scikit-learn-contrib/hdbscan", + "rel": "/software/repository/github/scikit-learn-contrib/hdbscan", + "avatar": "https://avatars.githubusercontent.com/u/17349883?v=4", + "description": "A high performance implementation of HDBSCAN clustering.", "topics": [ - "r", - "r-package" + "machine-learning", + "machine-learning-algorithms", + "clustering", + "clustering-algorithm", + "cluster-analysis", + "clustering-evaluation" ] }, { - "uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", - "url": "https://github.com/AndreinaCastillo/Genie_manuscript_data_analysis", - "rel": "/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", - "avatar": "https://avatars.githubusercontent.com/u/23280243?v=4", - "description": "Repository containing R code for the analysis of student pre- and post-recitation responses ", + "uid": "github/GenomePathogenAnalysisService/read-it-and-keep", + "url": "https://github.com/GlobalPathogenAnalysisService/read-it-and-keep", + "rel": "/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", + "avatar": "https://avatars.githubusercontent.com/u/84399229?v=4", + "description": "Read contamination removal", "topics": [] }, { - "uid": "github/einsteinpy/einsteinpy", - "url": "https://github.com/einsteinpy/einsteinpy", - "rel": "/software/repository/github/einsteinpy/einsteinpy", - "avatar": "https://avatars.githubusercontent.com/u/47172316?v=4", - "description": "Repository for the EinsteinPy core package :rocket:", - "topics": [ - "gravitational-physics", - "orbital-simulation", - "perihelion", - "space-physics", - "general-relativity", - "geodesics" - ] - }, - { - "uid": "github/omboersma/deepglow", - "url": "https://github.com/OMBoersma/DeepGlow", - "rel": "/software/repository/github/omboersma/deepglow", - "avatar": "https://avatars.githubusercontent.com/u/32190968?v=4", - "description": "A neural network emulator for BOXFIT", + "uid": "github/athob/py-ananke", + "url": "https://github.com/athob/py-ananke", + "rel": "/software/repository/github/athob/py-ananke", + "avatar": "https://avatars.githubusercontent.com/u/45973167?v=4", + "description": "Python pipeline to generate mock astrometric and photometric catalogs of synthetic stars derived from particle-based simulated star populations", "topics": [] }, { - "uid": "github/WatsonGroupTCD/J2suscep", - "url": "https://github.com/WatsonGroupTCD/J2suscep", - "rel": "/software/repository/github/WatsonGroupTCD/J2suscep", - "avatar": "https://avatars.githubusercontent.com/u/20184515?v=4", - "description": "See https://github.com/WatsonGroupTCD/J2suscep/wiki", + "uid": "github/Anirbancosmo/limpy", + "url": "https://github.com/Anirbancosmo/Limpy", + "rel": "/software/repository/github/Anirbancosmo/limpy", + "avatar": "https://avatars.githubusercontent.com/u/56548789?v=4", + "description": "A python package for multi-line intensity mapping", "topics": [] }, { - "uid": "github/rkiman/wdwarfdate", - "url": "https://github.com/rkiman/wdwarfdate", - "rel": "/software/repository/github/rkiman/wdwarfdate", - "avatar": "https://avatars.githubusercontent.com/u/18469579?v=4", - "description": "Calculate white dwarfs ages from effective temperature and surface gravity.", + "uid": "github/grd349/PBjam", + "url": "https://github.com/grd349/PBjam", + "rel": "/software/repository/github/grd349/PBjam", + "avatar": "https://avatars.githubusercontent.com/u/14784265?v=4", + "description": "A repo for our peak baggin code and tips on jam", "topics": [] }, { - "uid": "github/miguelzuma/hi_class_public", - "url": "https://github.com/miguelzuma/hi_class_public", - "rel": "/software/repository/github/miguelzuma/hi_class_public", - "avatar": "https://avatars.githubusercontent.com/u/5014027?v=4", - "description": "Public version of Horndeski in the Cosmic Linear Anisotropy Solving System", + "uid": "github/AstroUGent/shadowfax", + "url": "https://github.com/AstroUGent/shadowfax", + "rel": "/software/repository/github/AstroUGent/shadowfax", + "avatar": "https://avatars.githubusercontent.com/u/16303138?v=4", + "description": "A public moving mesh hydrodynamical integration code, including gravity and a collisionless component.", "topics": [] }, { - "uid": "github/aarondotter/iso", - "url": "https://github.com/aarondotter/iso", - "rel": "/software/repository/github/aarondotter/iso", - "avatar": "https://avatars.githubusercontent.com/u/3239471?v=4", - "description": "MESA isochrone code", + "uid": "github/parmoo/parmoo", + "url": "https://github.com/parmoo/parmoo", + "rel": "/software/repository/github/parmoo/parmoo", + "avatar": "https://avatars.githubusercontent.com/u/71412470?v=4", + "description": "Python library for parallel multiobjective simulation optimization", "topics": [ - "stars", - "evolution", - "isochrones" - ] - }, - { - "uid": "github/erikbern/ann-benchmarks", - "url": "https://github.com/erikbern/ann-benchmarks", - "rel": "/software/repository/github/erikbern/ann-benchmarks", - "avatar": "https://avatars2.githubusercontent.com/u/1027979?v=4", - "description": "Benchmarks of approximate nearest neighbor libraries in Python", - "topics": [ - "nearest-neighbors", - "benchmark", - "docker" + "multiobjective-optimization", + "python3", + "simulation-optimization", + "surrogate-based-optimization", + "blackbox-optimization", + "mathematical-software", + "multicriteria-optimization", + "multiobjective", + "numerical-optimization", + "simulation-based-optimization", + "response-surface-methodology" ] }, { - "uid": "github/pymc-devs/pymc3", - "url": "https://github.com/pymc-devs/pymc3", - "rel": "/software/repository/github/pymc-devs/pymc3", - "avatar": "https://avatars3.githubusercontent.com/u/81121?v=4", - "description": "Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano", - "topics": [ - "python", - "statistical-analysis", - "bayesian-inference", - "mcmc", - "variational-inference", - "theano", - "probabilistic-programming" - ] + "uid": "github/SIOSlab/exodetbox", + "url": "https://github.com/SIOSlab/exodetbox", + "rel": "/software/repository/github/SIOSlab/exodetbox", + "avatar": "https://avatars.githubusercontent.com/u/39835313?v=4", + "description": "Methods for finding planets sharing a common (s,dmag)", + "topics": [] }, { - "uid": "github/wilsonrljr/sysidentpy", - "url": "https://github.com/wilsonrljr/sysidentpy", - "rel": "/software/repository/github/wilsonrljr/sysidentpy", - "avatar": "https://avatars1.githubusercontent.com/u/13462356?v=4", - "description": "A Python package for System Identification using NARMAX models", + "uid": "github/SIOSlab/NEXO", + "url": "https://github.com/SIOSlab/NEXO", + "rel": "/software/repository/github/SIOSlab/NEXO", + "avatar": "https://avatars.githubusercontent.com/u/39835313?v=4", + "description": "Nonsingular Estimator for Exoplanet Orbits", "topics": [] }, { - "uid": "github/acil-bwh/bayes_traj", - "url": "https://github.com/acil-bwh/bayes_traj", - "rel": "/software/repository/github/acil-bwh/bayes_traj", - "avatar": "https://avatars.githubusercontent.com/u/4038495?v=4", - "description": "Algorithms and tools for Bayesian trajectory modeling", - "topics": [] + "uid": "github/DGtal-team/DGtal", + "url": "https://github.com/DGtal-team/DGtal", + "rel": "/software/repository/github/DGtal-team/DGtal", + "avatar": "https://avatars.githubusercontent.com/u/1013900?v=4", + "description": "Digital Geometry Tools and Algorithm Library", + "topics": [ + "digital-geometry", + "geometry-processing", + "topology", + "computational-geometry", + "discrete-mathematics" + ] }, { - "uid": "github/JEFworks-Lab/STdeconvolve", - "url": "https://github.com/JEFworks-Lab/STdeconvolve", - "rel": "/software/repository/github/JEFworks-Lab/STdeconvolve", - "avatar": "https://avatars.githubusercontent.com/u/68028140?v=4", - "description": "Reference-free cell-type deconvolution of multi-cellular spatially resolved transcriptomics data", + "uid": "github/fgbuster/fgbuster", + "url": "https://github.com/fgbuster/fgbuster", + "rel": "/software/repository/github/fgbuster/fgbuster", + "avatar": "https://avatars.githubusercontent.com/u/37635391?v=4", + "description": "Parametric component separation for Cosmic Microwave Background observations", "topics": [] }, { - "uid": "github/jhparkastro/gpcal", - "url": "https://github.com/jhparkastro/gpcal", - "rel": "/software/repository/github/jhparkastro/gpcal", - "avatar": "https://avatars.githubusercontent.com/u/66363038?v=4", - "description": null, + "uid": "github/c-zhou/yahs", + "url": "https://github.com/c-zhou/yahs", + "rel": "/software/repository/github/c-zhou/yahs", + "avatar": "https://avatars.githubusercontent.com/u/11916266?v=4", + "description": "Yet another Hi-C scaffolding tool", "topics": [] }, { - "uid": "github/virgesmith/neworder", - "url": "https://github.com/virgesmith/neworder", - "rel": "/software/repository/github/virgesmith/neworder", - "avatar": "https://avatars.githubusercontent.com/u/19323577?v=4", - "description": "A dynamic microsimulation framework for python", + "uid": "github/NickMilsonPhysics/BinaryStarSolver", + "url": "https://github.com/NickMilsonPhysics/BinaryStarSolver", + "rel": "/software/repository/github/NickMilsonPhysics/BinaryStarSolver", + "avatar": "https://avatars.githubusercontent.com/u/71746058?v=4", + "description": "BinaryStarSolver is a Python 3 program which solves for the orbital elements of binary stars, given radial velocity time series", "topics": [ - "python3", - "microsimulation", - "monte-carlo", - "mpi", - "cplusplus-17", - "pybind11", - "numpy", - "pandas", - "markov-chain" + "astronomy", + "binary-stars", + "radial-velocity", + "rv", + "orbit" ] }, { - "uid": "github/fjdu/myRadex", - "url": "https://github.com/fjdu/myRadex", - "rel": "/software/repository/github/fjdu/myRadex", - "avatar": "https://avatars.githubusercontent.com/u/1042334?v=4", - "description": "Similar to radex, with a different way to solve the statistical equilibrium problem", + "uid": "github/martinfleis/clustergram", + "url": "https://github.com/martinfleis/clustergram", + "rel": "/software/repository/github/martinfleis/clustergram", + "avatar": "https://avatars.githubusercontent.com/u/36797143?v=4", + "description": "Clustergram - Visualization and diagnostics for cluster analysis in Python", "topics": [] }, { - "uid": "github/fjdu/rac-2d", - "url": "https://github.com/fjdu/rac-2d", - "rel": "/software/repository/github/fjdu/rac-2d", - "avatar": "https://avatars.githubusercontent.com/u/1042334?v=4", - "description": "Radiative transfer and chemistry", + "uid": "github/surhh/nfitsview", + "url": "https://github.com/surhh/nfitsview", + "rel": "/software/repository/github/surhh/nfitsview", + "avatar": "https://avatars.githubusercontent.com/u/109148999?v=4", + "description": "nFITSview - A simple and user-friendly FITS image viewer", "topics": [] }, { - "uid": "github/DFKI-NI/syclops", - "url": "https://github.com/DFKI-NI/syclops", - "rel": "/software/repository/github/DFKI-NI/syclops", - "avatar": "https://avatars.githubusercontent.com/u/69036303?v=4", - "description": "Syclops is a tool for creating synthetic data from 3D virtual environments with photorealistic renderings and pixel-perfect annotations.", + "uid": "github/wwood/kingfisher-download", + "url": "https://github.com/wwood/kingfisher-download", + "rel": "/software/repository/github/wwood/kingfisher-download", + "avatar": "https://avatars.githubusercontent.com/u/15348?v=4", + "description": "Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.", "topics": [ - "3d-rendering", - "annotation", - "asset-management", - "bounding-boxes", - "computer-vision", - "data-generation", - "dataset-creation", - "depth-estimation", - "instance-segmentation", - "keypoints", - "machine-learning", - "photorealistic", - "point-clouds", - "randomization", - "semantic-segmentation", - "structured-light", - "synthetic-data", - "virtual-environments" + "sra", + "aspera-client", + "fastq-files" ] }, { - "uid": "github/nci/scores", - "url": "https://github.com/nci/scores", - "rel": "/software/repository/github/nci/scores", - "avatar": "https://avatars.githubusercontent.com/u/18274870?v=4", - "description": "Metrics for the verification, evaluation and optimisation of forecasts, predictions or models.", + "uid": "github/jfmrod/MAPseq", + "url": "https://github.com/jfmrod/MAPseq", + "rel": "/software/repository/github/jfmrod/MAPseq", + "avatar": "https://avatars.githubusercontent.com/u/5286814?v=4", + "description": "highthroughput rRNA sequence classification and OTU mapping for metagenomic samples", + "topics": [] + }, + { + "uid": "github/jeancmaia/mcglm", + "url": "https://github.com/jeancmaia/mcglm", + "rel": "/software/repository/github/jeancmaia/mcglm", + "avatar": "https://avatars.githubusercontent.com/u/33667670?v=4", + "description": "Python Framework for Multivariate Covariance Generalized Linear Models ", "topics": [ - "dask", - "forecast-evaluation", - "forecast-verification", - "forecasting", - "model-validation", - "pandas", - "python", - "xarray", - "climate", - "oceanography", - "weather", - "verification", - "contingency-table" + "statistical-inference", + "statistical-models", + "data-science", + "python" ] }, { - "uid": "github/klho/FLAM", - "url": "https://github.com/klho/FLAM", - "rel": "/software/repository/github/klho/FLAM", - "avatar": "https://avatars1.githubusercontent.com/u/1369071?v=4", - "description": "Fast linear algebra in MATLAB", + "uid": "github/nell-byler/cloudyfsps", + "url": "https://github.com/nell-byler/cloudyfsps", + "rel": "/software/repository/github/nell-byler/cloudyfsps", + "avatar": "https://avatars.githubusercontent.com/u/2601325?v=4", + "description": "Python interface between FSPS and Cloudy.", "topics": [] }, { - "uid": "github/nsoranzo/sspace_basic", - "url": "https://github.com/nsoranzo/sspace_basic", - "rel": "/software/repository/github/nsoranzo/sspace_basic", - "avatar": "https://avatars.githubusercontent.com/u/4924623?v=4", - "description": "SSPACE Basic, SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension", + "uid": "github/erf-model/ERF", + "url": "https://github.com/erf-model/ERF", + "rel": "/software/repository/github/erf-model/ERF", + "avatar": "https://avatars.githubusercontent.com/u/59941622?v=4", + "description": "Energy Research and Forecasting Model", "topics": [] }, { - "uid": "github/SMI/SmiServices", - "url": "https://github.com/SMI/SmiServices", - "rel": "/software/repository/github/SMI/SmiServices", - "avatar": "https://avatars3.githubusercontent.com/u/56437605?v=4", - "description": "Scale-able loading, linking and anonymisation of DICOM images for healthcare research environments (e.g. Safe Havens)", + "uid": "github/AIgnesti/PT-REX", + "url": "https://github.com/AIgnesti/PT-REX", + "rel": "/software/repository/github/AIgnesti/PT-REX", + "avatar": "https://avatars.githubusercontent.com/u/68424557?v=4", + "description": null, "topics": [] }, { - "uid": "github/Ohervet/Bjet_MCMC", - "url": "https://github.com/Ohervet/Bjet_MCMC", - "rel": "/software/repository/github/Ohervet/Bjet_MCMC", - "avatar": "https://avatars.githubusercontent.com/u/52715983?v=4", - "description": "Bjet_MCMC is a tool to to automatically model multiwavelength spectral energy distributions of blazars, considering one-zone synchrotron-self-Compton (SSC) model with or without the addition of external inverse-Compton process from the thermal emission of the nucleus. It also contains manual fitting functionalities for multi-zone SSC modeling. ", + "uid": "github/Hyperthetical/DarkMatters", + "url": "https://github.com/Hyperthetical/DarkMatters", + "rel": "/software/repository/github/Hyperthetical/DarkMatters", + "avatar": "https://avatars.githubusercontent.com/u/35954338?v=4", + "description": "Multi-frequency emissions from dark matter annihilation/decay", "topics": [] }, { - "uid": "github/labsquare/CutePeaks", - "url": "https://github.com/labsquare/CutePeaks", - "rel": "/software/repository/github/labsquare/CutePeaks", - "avatar": "https://avatars.githubusercontent.com/u/2106259?v=4", - "description": "CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.", + "uid": "github/RTIP/artip", + "url": "https://github.com/RTIP/artip", + "rel": "/software/repository/github/RTIP/artip", + "avatar": "https://avatars.githubusercontent.com/u/34025575?v=4", + "description": "Automated Radio Telescope Imaging Pipeline", "topics": [ - "sanger-chromatograms", - "ab1", - "scf" + "radio-astronomy", + "measurement-set", + "casa", + "pipeline", + "python", + "gmrt", + "radio-telescopes", + "automated" ] }, { - "uid": "github/tpospisi/nnkcde", - "url": "https://github.com/tpospisi/NNKCDE", - "rel": "/software/repository/github/tpospisi/nnkcde", - "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", - "description": "Nearest Neighbor Kernel Conditional Density Estimation", - "topics": [] + "uid": "github/DidierMurilloF/FielDHub", + "url": "https://github.com/DidierMurilloF/FielDHub", + "rel": "/software/repository/github/DidierMurilloF/FielDHub", + "avatar": "https://avatars.githubusercontent.com/u/79462830?v=4", + "description": "FielDHub is an R Shiny design of experiments (DOE) app that aids in the creation of traditional, unreplicated, augmented and partially-replicated designs applied to agriculture, plant breeding, forestry, animal and biological sciences.", + "topics": [ + "experimental", + "design", + "breeding", + "agricultural" + ] }, { - "uid": "github/tpospisi/cdetools", - "url": "https://github.com/tpospisi/cdetools", - "rel": "/software/repository/github/tpospisi/cdetools", - "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", - "description": "Tools for Conditional Density Estimates", + "uid": "github/BaroudLab/Griottes", + "url": "https://github.com/BaroudLab/Griottes", + "rel": "/software/repository/github/BaroudLab/Griottes", + "avatar": "https://avatars.githubusercontent.com/u/97296791?v=4", + "description": "Python program to generate NetworkX graphs from segmented images.", "topics": [] }, { - "uid": "github/tpospisi/RFCDE", - "url": "https://github.com/tpospisi/RFCDE", - "rel": "/software/repository/github/tpospisi/RFCDE", - "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", - "description": "Random Forests for Conditional Density Estimation", - "topics": [] + "uid": "github/projectmesa/mesa", + "url": "https://github.com/projectmesa/mesa", + "rel": "/software/repository/github/projectmesa/mesa", + "avatar": "https://avatars.githubusercontent.com/u/8754505?v=4", + "description": "Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.", + "topics": [ + "mesa", + "agent-based-modeling", + "agent-based-simulation", + "simulation-framework", + "simulation", + "simulation-environment", + "complex-systems", + "complexity-analysis", + "modeling-agents", + "spatial-models", + "gis" + ] }, { - "uid": "github/ParaFly/ParaFly", - "url": "https://github.com/ParaFly/ParaFly", - "rel": "/software/repository/github/ParaFly/ParaFly", - "avatar": "https://avatars.githubusercontent.com/u/31590597?v=4", - "description": "ParaFly - parallel cmd processing utility", + "uid": "github/JulianBMunoz/Zeus21", + "url": "https://github.com/JulianBMunoz/Zeus21", + "rel": "/software/repository/github/JulianBMunoz/Zeus21", + "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", + "description": "Zeus21: Lightning-fast simulations of cosmic dawn", + "topics": [ + "21-cm", + "21-cm-cosmology", + "21-cm-powerspectrum", + "cosmic-dawn", + "cosmology", + "cosmology-inference", + "galaxy-evolution", + "reionization", + "hst", + "jwst", + "luminosity-function" + ] + }, + { + "uid": "github/JulianBMunoz/21cmvFAST", + "url": "https://github.com/JulianBMunoz/21cmvFAST", + "rel": "/software/repository/github/JulianBMunoz/21cmvFAST", + "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", + "description": "Modified version of 21cmFAST including dark matter-baryon relative velocities.", "topics": [] }, { - "uid": "github/davtsang/slimplectic", - "url": "https://github.com/davtsang/slimplectic", - "rel": "/software/repository/github/davtsang/slimplectic", - "avatar": "https://avatars.githubusercontent.com/u/8050908?v=4", - "description": "Python code for generating and running \"slimplectic\" integrators (nonconservative variational integrators)", + "uid": "github/JulianBMunoz/RelicFast", + "url": "https://github.com/JulianBMunoz/RelicFast", + "rel": "/software/repository/github/JulianBMunoz/RelicFast", + "avatar": "https://avatars.githubusercontent.com/u/22434409?v=4", + "description": "Code to find scale-dependent halo bias quickly and accurately", "topics": [] }, { - "uid": "github/PolyChord/PolyChordLite", - "url": "https://github.com/PolyChord/PolyChordLite", - "rel": "/software/repository/github/PolyChord/PolyChordLite", - "avatar": "https://avatars.githubusercontent.com/u/38859081?v=4", - "description": "Public version of PolyChord: See polychord.co.uk for PolyChordPro", + "uid": "github/tldr-group/samba-web", + "url": "https://github.com/tldr-group/samba-web", + "rel": "/software/repository/github/tldr-group/samba-web", + "avatar": "https://avatars.githubusercontent.com/u/78808638?v=4", + "description": "Local version of samba-web, a trainable segmentation web app with deep learning powered labelling", "topics": [ - "bayesian-inference", - "nested-sampling", - "astronomy", - "cosmology", - "particle-physics", - "sampling-methods", - "statistics", - "polychord", - "log-likelihood", - "mpi", - "posterior", - "openmpi", - "gfortran" + "materials-science", + "segment-anything-model", + "segmentation", + "webapp" ] }, { - "uid": "github/mgckind/SparsePz", - "url": "https://github.com/mgckind/SparsePz", - "rel": "/software/repository/github/mgckind/SparsePz", - "avatar": "https://avatars.githubusercontent.com/u/6931913?v=4", - "description": "Sparse Representation of Photometric Redshift PDFs", + "uid": "github/tldr-group/taufactor", + "url": "https://github.com/tldr-group/taufactor", + "rel": "/software/repository/github/tldr-group/taufactor", + "avatar": "https://avatars.githubusercontent.com/u/78808638?v=4", + "description": "TauFactor is a parallelised solver for calculating tortuosity factors from voxel data.", "topics": [] }, { - "uid": "github/mgckind/easyaccess", - "url": "https://github.com/mgckind/easyaccess", - "rel": "/software/repository/github/mgckind/easyaccess", - "avatar": "https://avatars.githubusercontent.com/u/6931913?v=4", - "description": "SQL command line interpreter for astronomical surveys", + "uid": "github/kmlefran/aiida-aimall", + "url": "https://github.com/kmlefran/aiida-aimall", + "rel": "/software/repository/github/kmlefran/aiida-aimall", + "avatar": "https://avatars.githubusercontent.com/u/138684774?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/GeoscienceAustralia/eo-tides", + "url": "https://github.com/GeoscienceAustralia/eo-tides", + "rel": "/software/repository/github/GeoscienceAustralia/eo-tides", + "avatar": "https://avatars.githubusercontent.com/u/4704285?v=4", + "description": "Tide modelling tools for large-scale satellite earth observation analysis", "topics": [ - "python", - "sql-query", - "astronomy", - "interpreter" + "earth-observation", + "ocean-modelling", + "oceanography", + "remote-sensing", + "satellite-data", + "tides", + "coastal", + "coastal-modelling", + "tidesandcurrents", + "tide-modelling" ] }, { - "uid": "github/exoclime/THOR", - "url": "https://github.com/exoclime/THOR", - "rel": "/software/repository/github/exoclime/THOR", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "Atmospheric fluid dynamics solver optimized for GPUs.", + "uid": "github/lengoctram/DustPOL-py", + "url": "https://github.com/lengoctram/DustPOL-py", + "rel": "/software/repository/github/lengoctram/DustPOL-py", + "avatar": "https://avatars.githubusercontent.com/u/91097424?v=4", + "description": "numerical modelling (source code)", "topics": [] }, { - "uid": "github/exoclime/VULCAN", - "url": "https://github.com/exoclime/VULCAN", - "rel": "/software/repository/github/exoclime/VULCAN", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "Chemical Kinetics For Exoplanetary Atmospheres", + "uid": "github/lengoctram/DustPOL_py", + "url": "https://github.com/lengoctram/DustPOL_py", + "rel": "/software/repository/github/lengoctram/DustPOL_py", + "avatar": "https://avatars.githubusercontent.com/u/91097424?v=4", + "description": "numerical modelling (source code)", "topics": [] }, { - "uid": "github/exoclime/HELA", - "url": "https://github.com/exoclime/HELA", - "rel": "/software/repository/github/exoclime/HELA", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "Random Forest retrieval for exoplanet atmospheres", + "uid": "github/ernewton/tellrv", + "url": "https://github.com/ernewton/tellrv", + "rel": "/software/repository/github/ernewton/tellrv", + "avatar": "https://avatars.githubusercontent.com/u/4790228?v=4", + "description": "Radial velocities for low-resolution NIR spectra using telluric features to provide absolute wavelength calibration", "topics": [] }, { - "uid": "github/exoclime/HELIOS", - "url": "https://github.com/exoclime/HELIOS", - "rel": "/software/repository/github/exoclime/HELIOS", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "GPU-Accelerated Radiative Transfer Code For Exoplanetary Atmospheres", + "uid": "github/mengaldo/PySPOD", + "url": "https://github.com/mengaldo/PySPOD", + "rel": "/software/repository/github/mengaldo/PySPOD", + "avatar": "https://avatars.githubusercontent.com/u/8100801?v=4", + "description": "A Python package for spectral proper orthogonal decomposition (SPOD). ", + "topics": [ + "spod", + "dynamical-systems", + "data-mining", + "coherent-structures" + ] + }, + { + "uid": "github/kusmic/pycosie", + "url": "https://github.com/kusmic/pycosie", + "rel": "/software/repository/github/kusmic/pycosie", + "avatar": "https://avatars.githubusercontent.com/u/23317602?v=4", + "description": "pycosie (pie cozy) is a complimentary suite of analyses software written in Python meant to be analyzed on Technicolor Dawn and quasarcosie outputs. It is the Pyhton derivative of ARCOSIE.", "topics": [] }, { - "uid": "github/exoclime/HELIOS-K", - "url": "https://github.com/exoclime/HELIOS-K", - "rel": "/software/repository/github/exoclime/HELIOS-K", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "Ultrafast opacity calculator for exoplanetary atmospheres.", + "uid": "github/mr-superonion/FPFS", + "url": "https://github.com/mr-superonion/FPFS", + "rel": "/software/repository/github/mr-superonion/FPFS", + "avatar": "https://avatars.githubusercontent.com/u/12228372?v=4", + "description": "A fast, accurate estimator for small shear distortion.", "topics": [] }, { - "uid": "github/exoclime/Helios-r2", - "url": "https://github.com/exoclime/Helios-r2", - "rel": "/software/repository/github/exoclime/Helios-r2", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "A Bayesian Nested-Sampling Retrieval Code", + "uid": "github/JuliaArrays/BlockArrays.jl", + "url": "https://github.com/JuliaArrays/BlockArrays.jl", + "rel": "/software/repository/github/JuliaArrays/BlockArrays.jl", + "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", + "description": "BlockArrays for Julia", "topics": [ - "cuda", - "exoplanets", - "retrieval" + "julia", + "matrix", + "arrays", + "blockarrays" ] }, { - "uid": "github/exoclime/FastChem", - "url": "https://github.com/exoclime/FastChem", - "rel": "/software/repository/github/exoclime/FastChem", - "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", - "description": "An ultra-fast equilibrium chemistry", + "uid": "github/JuliaArrays/InfiniteArrays.jl", + "url": "https://github.com/JuliaArrays/InfiniteArrays.jl", + "rel": "/software/repository/github/JuliaArrays/InfiniteArrays.jl", + "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", + "description": "A Julia package for representing infinite-dimensional arrays", "topics": [] }, { - "uid": "github/Zafiirah13/meercrab", - "url": "https://github.com/Zafiirah13/meercrab", - "rel": "/software/repository/github/Zafiirah13/meercrab", - "avatar": "https://avatars.githubusercontent.com/u/20860570?v=4", - "description": "MeerLICHT Classification of Real And Bogus using deep learning", - "topics": [ - "deep-learning", - "convolutional-neural-networks", - "optimization", - "transients" - ] - }, - { - "uid": "github/Huracan-project/huracanpy", - "url": "https://github.com/Huracan-project/huracanpy", - "rel": "/software/repository/github/Huracan-project/huracanpy", - "avatar": "https://avatars.githubusercontent.com/u/167978010?v=4", - "description": "Package for working with various forms of feature tracking data", + "uid": "github/JuliaArrays/LazyArrays.jl", + "url": "https://github.com/JuliaArrays/LazyArrays.jl", + "rel": "/software/repository/github/JuliaArrays/LazyArrays.jl", + "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", + "description": "Lazy arrays and linear algebra in Julia", "topics": [] }, { - "uid": "github/AutoResearch/sweetbean", - "url": "https://github.com/AutoResearch/sweetbean", - "rel": "/software/repository/github/AutoResearch/sweetbean", - "avatar": "https://avatars.githubusercontent.com/u/93661143?v=4", - "description": "A declarative programming language built in Python, designed for the synthesis of behavioral experiments", - "topics": [ - "automated-documentation", - "behavioral-experiments", - "online-behavioral-experiments", - "synthetic-participants" - ] + "uid": "github/Alymantara/pydoppler", + "url": "https://github.com/Alymantara/pydoppler", + "rel": "/software/repository/github/Alymantara/pydoppler", + "avatar": "https://avatars.githubusercontent.com/u/5550434?v=4", + "description": "A python wrapper for Henk Spruit's doppler tomography software", + "topics": [] }, { - "uid": "github/kristiantcho/flashcurve", - "url": "https://github.com/kristiantcho/flashcurve", - "rel": "/software/repository/github/kristiantcho/flashcurve", - "avatar": "https://avatars.githubusercontent.com/u/41946704?v=4", - "description": "A python tool for the fast generation of adaptive-binning for lightcurves with Fermi-LAT gamma-ray data using machine learning", + "uid": "github/salbalkus/CausalTables.jl", + "url": "https://github.com/salbalkus/CausalTables.jl", + "rel": "/software/repository/github/salbalkus/CausalTables.jl", + "avatar": "https://avatars.githubusercontent.com/u/45985925?v=4", + "description": "A new type of Table to store and simulate data for causal inference in Julia.", "topics": [] }, { - "uid": "github/Singh-Lab/uKIN", - "url": "https://github.com/Singh-Lab/uKIN", - "rel": "/software/repository/github/Singh-Lab/uKIN", - "avatar": "https://avatars.githubusercontent.com/u/21062767?v=4", - "description": "Using Knowledge In Networks", + "uid": "github/SYalouz/QuantNBody", + "url": "https://github.com/SYalouz/QuantNBody", + "rel": "/software/repository/github/SYalouz/QuantNBody", + "avatar": "https://avatars.githubusercontent.com/u/52918633?v=4", + "description": "QuantNBody : a python package for quantum chemistry/physics to manipulate many-body operators and wave functions.", "topics": [] }, { - "uid": "github/Singh-Lab/DeMaSk", - "url": "https://github.com/Singh-Lab/DeMaSk", - "rel": "/software/repository/github/Singh-Lab/DeMaSk", - "avatar": "https://avatars.githubusercontent.com/u/21062767?v=4", - "description": "Prediction of protein substitution impact using a directional substitution matrix and homolog alignments", - "topics": [] + "uid": "github/s-will/LocARNA", + "url": "https://github.com/s-will/LocARNA", + "rel": "/software/repository/github/s-will/LocARNA", + "avatar": "https://avatars.githubusercontent.com/u/11848365?v=4", + "description": "Alignment of RNAs", + "topics": [ + "alignment", + "rna-structure-prediction", + "rna-structural-analysis" + ] }, { - "uid": "github/liuhong-jia/scAnno", - "url": "https://github.com/liuhong-jia/scAnno", - "rel": "/software/repository/github/liuhong-jia/scAnno", - "avatar": "https://avatars.githubusercontent.com/u/115637576?v=4", + "uid": "github/GreiffLab/immuneREF", + "url": "https://github.com/GreiffLab/immuneREF", + "rel": "/software/repository/github/GreiffLab/immuneREF", + "avatar": "https://avatars.githubusercontent.com/u/38805362?v=4", "description": null, "topics": [] }, { - "uid": "github/EpistasisLab/regens", - "url": "https://github.com/EpistasisLab/regens", - "rel": "/software/repository/github/EpistasisLab/regens", - "avatar": "https://avatars.githubusercontent.com/u/20861190?v=4", - "description": "Recombines real genomic segments to simulate whole genomes", + "uid": "github/jorgensd/adios4dolfinx", + "url": "https://github.com/jorgensd/adios4dolfinx", + "rel": "/software/repository/github/jorgensd/adios4dolfinx", + "avatar": "https://avatars.githubusercontent.com/u/8554300?v=4", + "description": "Extending DOLFINx with checkpointing functionality", "topics": [ - "simulated-datasets", - "gwas-tools" + "adios2", + "fenicsx", + "checkpointing", + "mpi-applications" ] }, { - "uid": "github/EpistasisLab/tpot", - "url": "https://github.com/EpistasisLab/tpot", - "rel": "/software/repository/github/EpistasisLab/tpot", - "avatar": "https://avatars.githubusercontent.com/u/20861190?v=4", - "description": "A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.", + "uid": "github/CobayaSampler/cobaya", + "url": "https://github.com/CobayaSampler/cobaya", + "rel": "/software/repository/github/CobayaSampler/cobaya", + "avatar": "https://avatars.githubusercontent.com/u/37546658?v=4", + "description": "Code for Bayesian Analysis", "topics": [ - "machine-learning", - "python", - "data-science", - "automl", - "automation", - "scikit-learn", - "hyperparameter-optimization", - "model-selection", - "parameter-tuning", - "automated-machine-learning", - "random-forest", - "gradient-boosting", - "feature-engineering", - "xgboost" + "bayesian-inference", + "cosmological-inference", + "mcmc-sampler" ] }, { - "uid": "github/mind-inria/mri-nufft", - "url": "https://github.com/mind-inria/mri-nufft", - "rel": "/software/repository/github/mind-inria/mri-nufft", - "avatar": "https://avatars.githubusercontent.com/u/118902559?v=4", - "description": "Doing non-Cartesian MR Imaging has never been so easy.", + "uid": "github/SchmidtDSE/afscgap", + "url": "https://github.com/SchmidtDSE/afscgap", + "rel": "/software/repository/github/SchmidtDSE/afscgap", + "avatar": "https://avatars.githubusercontent.com/u/124641794?v=4", + "description": "Python-based tools for NOAA AFSC GAP marine species surveys data", "topics": [ - "cuda", - "gpu", - "mri", - "mri-reconstruction", - "nufft", - "tensorflow", - "numerical-methods", - "numpy", - "torch" + "biodiversity", + "biology", + "fish", + "fisheries", + "noaa" ] }, { - "uid": "github/gotsunami/Youpi", - "url": "https://github.com/gotsunami/Youpi", - "rel": "/software/repository/github/gotsunami/Youpi", - "avatar": "https://avatars.githubusercontent.com/u/7566806?v=4", - "description": "A web application providing high level functionalities to perform data reduction on scientific FITS images.", - "topics": [] - }, - { - "uid": "github/shikhar249/OnionMHC", - "url": "https://github.com/shikhar249/OnionMHC", - "rel": "/software/repository/github/shikhar249/OnionMHC", - "avatar": "https://avatars.githubusercontent.com/u/43881057?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/IBM/topography-searcher", - "url": "https://github.com/IBM/topography-searcher", - "rel": "/software/repository/github/IBM/topography-searcher", - "avatar": "https://avatars.githubusercontent.com/u/1459110?v=4", - "description": "This Python package is designed for mapping the solution space of machine learning models. An understanding of the organisation of the solution space can answer important questions about the reproducibility, explainability and performance of ML methods.", + "uid": "github/mikegrudic/MakeCloud", + "url": "https://github.com/mikegrudic/MakeCloud", + "rel": "/software/repository/github/mikegrudic/MakeCloud", + "avatar": "https://avatars.githubusercontent.com/u/2715993?v=4", + "description": "MakeCloud: Make turbulent GMC initial conditions for GIZMO", "topics": [] }, { - "uid": "github/IBM/fold2seq", - "url": "https://github.com/IBM/fold2seq", - "rel": "/software/repository/github/IBM/fold2seq", - "avatar": "https://avatars.githubusercontent.com/u/1459110?v=4", - "description": "Code for Fold2Seq paper from ICML 2021", + "uid": "github/mikegrudic/pytreegrav", + "url": "https://github.com/mikegrudic/pytreegrav", + "rel": "/software/repository/github/mikegrudic/pytreegrav", + "avatar": "https://avatars.githubusercontent.com/u/2715993?v=4", + "description": "Fast N-body gravitational force and potential in Python", "topics": [] }, { - "uid": "github/RuthAngus/SIPK2", - "url": "https://github.com/RuthAngus/SIPK2", - "rel": "/software/repository/github/RuthAngus/SIPK2", - "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", - "description": "Systematics-Insensitive Periodograms for K2", + "uid": "github/tronsgaard/barycorr", + "url": "https://github.com/tronsgaard/barycorr", + "rel": "/software/repository/github/tronsgaard/barycorr", + "avatar": "https://avatars.githubusercontent.com/u/10196208?v=4", + "description": "Python interface for barycentric correction web applets", "topics": [] }, { - "uid": "github/RuthAngus/stardate", - "url": "https://github.com/RuthAngus/stardate", - "rel": "/software/repository/github/RuthAngus/stardate", - "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", - "description": "Combining dating methods for better stellar ages", + "uid": "github/dmnfarrell/epitopepredict", + "url": "https://github.com/dmnfarrell/epitopepredict", + "rel": "/software/repository/github/dmnfarrell/epitopepredict", + "avatar": "https://avatars0.githubusercontent.com/u/7859189?v=4", + "description": "Python package and command line tool for epitope prediction", "topics": [ - "stars", - "ages", - "stellar", - "isochrones", - "stellar-ages", - "isochrone-fitting", - "gyrochronology", - "age-rotation-relations", - "rotation", - "stellar-rotation", - "stellar-parameters", - "field-stars", - "bayesian", - "astronomy", - "astrophysics", - "mcmc", - "hierarchical", - "inference" + "epitope-prediction-methods", + "immunology", + "bioinformatics" ] }, { - "uid": "github/RuthAngus/gprotation", - "url": "https://github.com/RuthAngus/GProtation", - "rel": "/software/repository/github/RuthAngus/gprotation", - "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", - "description": "Measuring stellar rotation periods with Gaussian processes", - "topics": [] - }, - { - "uid": "github/AbeelLab/lorikeet", - "url": "https://github.com/AbeelLab/lorikeet", - "rel": "/software/repository/github/AbeelLab/lorikeet", - "avatar": "https://avatars.githubusercontent.com/u/10528646?v=4", - "description": "Digital spoligotyping of MTB strains from Illumina read data", - "topics": [] + "uid": "github/dmnfarrell/snpgenie", + "url": "https://github.com/dmnfarrell/snpgenie", + "rel": "/software/repository/github/dmnfarrell/snpgenie", + "avatar": "https://avatars0.githubusercontent.com/u/7859189?v=4", + "description": "command line and desktop tool for microbial variant calling", + "topics": [ + "bioinformatics", + "genomics", + "ngs-pipeline", + "python", + "pyside2" + ] }, { - "uid": "github/Extraweich/homopy", - "url": "https://github.com/Extraweich/homopy", - "rel": "/software/repository/github/Extraweich/homopy", - "avatar": "https://avatars.githubusercontent.com/u/50912803?v=4", - "description": "Your solution for stiffness problems", + "uid": "github/mikesmitka/truvot", + "url": "https://github.com/mikesmitka/truvot", + "rel": "/software/repository/github/mikesmitka/truvot", + "avatar": "https://avatars.githubusercontent.com/u/13972392?v=4", + "description": null, "topics": [] }, { - "uid": "github/SotaYoshida/NuclearToolkit.jl", - "url": "https://github.com/SotaYoshida/NuclearToolkit.jl", - "rel": "/software/repository/github/SotaYoshida/NuclearToolkit.jl", - "avatar": "https://avatars.githubusercontent.com/u/52435497?v=4", - "description": "NuclearToolkit.jl: Julia package for nuclear structure calculations", + "uid": "github/griffithlab/regtools", + "url": "https://github.com/griffithlab/regtools", + "rel": "/software/repository/github/griffithlab/regtools", + "avatar": "https://avatars.githubusercontent.com/u/8323084?v=4", + "description": "Integrate DNA-seq and RNA-seq data to identify mutations that are associated with regulatory effects on gene expression.", "topics": [] }, { - "uid": "github/sbraden/circle-craters", - "url": "https://github.com/sbraden/circle-craters", - "rel": "/software/repository/github/sbraden/circle-craters", - "avatar": "https://avatars.githubusercontent.com/u/1332595?v=4", - "description": "A planetary science crater-counting plugin for QGIS ", + "uid": "github/cholla-hydro/cholla", + "url": "https://github.com/cholla-hydro/cholla", + "rel": "/software/repository/github/cholla-hydro/cholla", + "avatar": "https://avatars.githubusercontent.com/u/18468918?v=4", + "description": "A GPU-based hydro code", "topics": [] }, { - "uid": "github/glotzerlab/hoomd-blue", - "url": "https://github.com/glotzerlab/hoomd-blue", - "rel": "/software/repository/github/glotzerlab/hoomd-blue", - "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", - "description": "Molecular dynamics and Monte Carlo soft matter simulation on GPUs.", + "uid": "github/rabix/cwl-format", + "url": "https://github.com/rabix/cwl-format", + "rel": "/software/repository/github/rabix/cwl-format", + "avatar": "https://avatars.githubusercontent.com/u/7840207?v=4", + "description": "A very opinionated code formatter for CWL", "topics": [ - "cuda", - "python", - "molecular-dynamics", - "hard-particle", - "hoomd-blue", - "simulation", - "gpu", - "singularity", - "docker", - "conda-forge", - "particle-system", - "monte-carlo-simulation" + "cwl", + "code-formatter", + "common-workflow-language" ] }, { - "uid": "github/glotzerlab/coxeter", - "url": "https://github.com/glotzerlab/coxeter", - "rel": "/software/repository/github/glotzerlab/coxeter", - "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", - "description": "Collection of tools to help initialize and manipulate shapes.", + "uid": "github/bmoster/emerge", + "url": "https://github.com/bmoster/emerge", + "rel": "/software/repository/github/bmoster/emerge", + "avatar": "https://avatars.githubusercontent.com/u/53537956?v=4", + "description": "Emerge - the smooth empirical model for galaxy formation", "topics": [ - "geometry", - "shapes", - "physics", - "computational-geometry", - "polyhedra", - "polygons" + "cosmology", + "dark-matter", + "galaxy-formation" ] }, { - "uid": "github/glotzerlab/freud", - "url": "https://github.com/glotzerlab/freud", - "rel": "/software/repository/github/glotzerlab/freud", - "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", - "description": "Powerful, efficient particle trajectory analysis in scientific Python.", - "topics": [ - "molecular-dynamics", - "analysis", - "scientific-computing", - "python", - "monte-carlo-simulation", - "data-analysis", - "spatial-analysis", - "particle-system", - "computational-chemistry", - "computational-physics", - "science", - "hacktoberfest" - ] + "uid": "github/astromer-science/main-code", + "url": "https://github.com/astromer-science/main-code", + "rel": "/software/repository/github/astromer-science/main-code", + "avatar": "https://avatars.githubusercontent.com/u/102744454?v=4", + "description": "Latest stable implemention of ASTROMER ", + "topics": [] }, { - "uid": "github/plumed/plumed2", - "url": "https://github.com/plumed/plumed2", - "rel": "/software/repository/github/plumed/plumed2", - "avatar": "https://avatars.githubusercontent.com/u/4379652?v=4", - "description": "Development version of plumed 2", + "uid": "github/DavidRConnell/matlab-igraph", + "url": "https://github.com/DavidRConnell/matlab-igraph", + "rel": "/software/repository/github/DavidRConnell/matlab-igraph", + "avatar": "https://avatars.githubusercontent.com/u/35470740?v=4", + "description": "Igraph bindings for matlab", "topics": [ - "molecular-dynamics", - "plugin", - "c-plus-plus", - "plumed", - "free-energy", - "plumed2", - "enhanced-sampling", - "trajectory-analysis" + "graph", + "graph-algorithms", + "matlab", + "network-analysis" ] }, { - "uid": "github/lengoctram/DustPOL-py", - "url": "https://github.com/lengoctram/DustPOL-py", - "rel": "/software/repository/github/lengoctram/DustPOL-py", - "avatar": "https://avatars.githubusercontent.com/u/91097424?v=4", - "description": "numerical modelling (source code)", + "uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", + "url": "https://github.com/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", + "rel": "/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", + "avatar": "https://avatars.githubusercontent.com/u/26425008?v=4", + "description": null, "topics": [] }, { - "uid": "github/lengoctram/DustPOL_py", - "url": "https://github.com/lengoctram/DustPOL_py", - "rel": "/software/repository/github/lengoctram/DustPOL_py", - "avatar": "https://avatars.githubusercontent.com/u/91097424?v=4", - "description": "numerical modelling (source code)", + "uid": "github/U-Alberta/ADaPT-ML", + "url": "https://github.com/U-Alberta/ADaPT-ML", + "rel": "/software/repository/github/U-Alberta/ADaPT-ML", + "avatar": "https://avatars.githubusercontent.com/u/4491791?v=4", + "description": null, "topics": [] }, { - "uid": "github/parklab/LiRA", - "url": "https://github.com/parklab/LiRA", - "rel": "/software/repository/github/parklab/LiRA", - "avatar": "https://avatars.githubusercontent.com/u/1216524?v=4", - "description": "(Linked Read Analysis) a computational tool for removing amplification artifacts from single-cell DNA sequencing data and estimating mutation rates in single cells.", + "uid": "github/jkluter/MLG", + "url": "https://github.com/jkluter/MLG", + "rel": "/software/repository/github/jkluter/MLG", + "avatar": "https://avatars.githubusercontent.com/u/60190328?v=4", + "description": "Microlensing with Gaia", "topics": [] }, { - "uid": "github/parklab/SCAN2", - "url": "https://github.com/parklab/SCAN2", - "rel": "/software/repository/github/parklab/SCAN2", - "avatar": "https://avatars.githubusercontent.com/u/1216524?v=4", - "description": "SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)", + "uid": "github/richford/groupyr", + "url": "https://github.com/richford/groupyr", + "rel": "/software/repository/github/richford/groupyr", + "avatar": "https://avatars.githubusercontent.com/u/7978135?v=4", + "description": "groupyr: Sparse Group Lasso in Python", "topics": [] }, { - "uid": "github/an0wen/MARDIGRAS", - "url": "https://github.com/an0wen/MARDIGRAS", - "rel": "/software/repository/github/an0wen/MARDIGRAS", - "avatar": "https://avatars.githubusercontent.com/u/26632008?v=4", - "description": "MAss-Radius DIaGRAm with Sliders", + "uid": "github/marschall-lab/panacus", + "url": "https://github.com/marschall-lab/panacus", + "rel": "/software/repository/github/marschall-lab/panacus", + "avatar": "https://avatars.githubusercontent.com/u/86833642?v=4", + "description": "Panacus is a tool for computing statistics for GFA-formatted pangenome graphs", + "topics": [ + "gfa", + "pangenomics", + "pangenome-growth", + "graph", + "pangenome", + "pangenome-graph" + ] + }, + { + "uid": "github/assume-framework/assume", + "url": "https://github.com/assume-framework/assume", + "rel": "/software/repository/github/assume-framework/assume", + "avatar": "https://avatars.githubusercontent.com/u/131251735?v=4", + "description": "ASSUME - Agent-based Simulation for Studying and Understanding Market Evolution", "topics": [] }, { - "uid": "github/bbbbbbzhou/MDPET", - "url": "https://github.com/bbbbbbzhou/MDPET", - "rel": "/software/repository/github/bbbbbbzhou/MDPET", - "avatar": "https://avatars.githubusercontent.com/u/61164038?v=4", - "description": "MDPET: A Unified Motion Correction and Denoising Adversarial Network for Low-dose Gated PET (IEEE Transactions on Medical Imaging, 2021)", + "uid": "github/rambaut/jebl2", + "url": "https://github.com/rambaut/jebl2", + "rel": "/software/repository/github/rambaut/jebl2", + "avatar": "https://avatars.githubusercontent.com/u/686405?v=4", + "description": "Automatically exported from code.google.com/p/jebl2", "topics": [] }, { - "uid": "github/sensein/etelemetry-client", - "url": "https://github.com/sensein/etelemetry-client", - "rel": "/software/repository/github/sensein/etelemetry-client", - "avatar": "https://avatars.githubusercontent.com/u/47326880?v=4", - "description": "Etelemetry client", + "uid": "github/davidharvey1986/pyRRG", + "url": "https://github.com/davidharvey1986/pyRRG", + "rel": "/software/repository/github/davidharvey1986/pyRRG", + "avatar": "https://avatars.githubusercontent.com/u/2930696?v=4", + "description": "pyRRG weak lensing shape measurement code. Measuring the 2nd and 4th order moments it uses a TinyTim model to correct for PSF distortions. It is invariant to number exposures, ortientation of the drizzle images. Using a machine learning algorithm it automatically star and galaxy classifies, howeve the user is able to do this manually if not accurate enough. For more see https://arxiv.org/abs/astro-ph/9905090. For bugs please report them to https://github.com/davidharvey1986/pyRRG or contact harvey@lorentz.leidenuniv.nl", "topics": [] }, { - "uid": "github/bpp/bpp", - "url": "https://github.com/bpp/bpp", - "rel": "/software/repository/github/bpp/bpp", - "avatar": "https://avatars.githubusercontent.com/u/37528284?v=4", - "description": "implements a versatile high-performance version of the BPP software", + "uid": "github/aberer/RogueNaRok", + "url": "https://github.com/aberer/RogueNaRok", + "rel": "/software/repository/github/aberer/RogueNaRok", + "avatar": "https://avatars.githubusercontent.com/u/881002?v=4", + "description": "A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf stability index and taxonomic instability index", "topics": [] }, { - "uid": "github/CATG-Github/panscan", - "url": "https://github.com/CATG-Github/panscan", - "rel": "/software/repository/github/CATG-Github/panscan", - "avatar": "https://avatars.githubusercontent.com/u/154121768?v=4", - "description": "A computational tool that identifies novel sequences, SVs, and gene duplications using pangenome VCF file and assemblies.", - "topics": [ - "bioinformatics", - "computational-biology", - "pangenome" - ] + "uid": "github/portsmouth/cmbview", + "url": "https://github.com/portsmouth/cmbview", + "rel": "/software/repository/github/portsmouth/cmbview", + "avatar": "https://avatars.githubusercontent.com/u/2774364?v=4", + "description": "Automatically exported from code.google.com/p/cmbview", + "topics": [] }, { - "uid": "github/goharbor/harbor", - "url": "https://github.com/goharbor/harbor", - "rel": "/software/repository/github/goharbor/harbor", - "avatar": "https://avatars.githubusercontent.com/u/40275816?v=4", - "description": "An open source trusted cloud native registry project that stores, signs, and scans content.", + "uid": "github/WaterFutures/EPyT-Flow", + "url": "https://github.com/WaterFutures/EPyT-Flow", + "rel": "/software/repository/github/WaterFutures/EPyT-Flow", + "avatar": "https://avatars.githubusercontent.com/u/149570313?v=4", + "description": "A high-level interface designed for the easy generation of hydraulic and water quality scenario data.", "topics": [ - "cncf", - "container", - "registry", - "helm", - "cloud-native", - "containers", - "docker", - "kubernetes", - "cncf-project", - "container-management", - "container-registry", - "hacktoberfest" + "epanet", + "epanet-python-toolkit", + "python", + "simulation", + "water", + "water-distribution-networks" ] }, { - "uid": "github/luntergroup/octopus", - "url": "https://github.com/luntergroup/octopus", - "rel": "/software/repository/github/luntergroup/octopus", - "avatar": "https://avatars.githubusercontent.com/u/12530086?v=4", - "description": "Bayesian haplotype-based mutation calling", - "topics": [ + "uid": "github/koszullab/pareidolia", + "url": "https://github.com/koszullab/pareidolia", + "rel": "/software/repository/github/koszullab/pareidolia", + "avatar": "https://avatars.githubusercontent.com/u/9391430?v=4", + "description": "Multi-sample change detection in Hi-C patterns", + "topics": [ "genomics", - "variant-calling", - "bioinformatics", - "variants", - "haplotypes", - "somatic-variants", - "de-novo-mutation", - "phasing", - "single-cell" + "hi-c", + "change-detection" ] }, { - "uid": "github/dynamics-of-stellar-systems/dynamite_release", - "url": "https://github.com/dynamics-of-stellar-systems/dynamite_release", - "rel": "/software/repository/github/dynamics-of-stellar-systems/dynamite_release", - "avatar": "https://avatars.githubusercontent.com/u/53822020?v=4", - "description": "dynamics, age and metallicity indicators tracing evolution", + "uid": "github/yuhuan-wu/mobilesal", + "url": "https://github.com/yuhuan-wu/MobileSal", + "rel": "/software/repository/github/yuhuan-wu/mobilesal", + "avatar": "https://avatars.githubusercontent.com/u/10758259?v=4", + "description": "[IEEE TPAMI21] MobileSal: Extremely Efficient RGB-D Salient Object Detection [PyTorch & Jittor]", "topics": [] }, { - "uid": "github/pmkruyen/dearscholar", - "url": "https://github.com/pmkruyen/dearscholar", - "rel": "/software/repository/github/pmkruyen/dearscholar", - "avatar": "https://avatars1.githubusercontent.com/u/20207147?v=4", - "description": "DearScholar: An open-source smartphone app for longitudinal scientific qualitative and quantitative (self-report) diary, log and survey research", + "uid": "github/PacificBiosciences/FALCON", + "url": "https://github.com/PacificBiosciences/FALCON", + "rel": "/software/repository/github/PacificBiosciences/FALCON", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries", "topics": [] }, { - "uid": "github/CajoterBraak/demc2", - "url": "https://github.com/CajoterBraak/demc2", - "rel": "/software/repository/github/CajoterBraak/demc2", - "avatar": "https://avatars.githubusercontent.com/u/12693502?v=4", - "description": "Differential Evolution Markov Chain parameter estimation", + "uid": "github/PacificBiosciences/blasr", + "url": null, + "rel": "/software/repository/github/PacificBiosciences/blasr", + "avatar": "", + "description": "BLASR (Basic Local Alignment with Successive Refinement) maps Single Molecule Sequencing (SMS) reads that are thousands of bases long, with divergence between the read and genome dominated by insertion and deletion error.", "topics": [] }, { - "uid": "github/MikeSWang/Harmonia", - "url": "https://github.com/MikeSWang/Harmonia", - "rel": "/software/repository/github/MikeSWang/Harmonia", - "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", - "description": "Hybrid-basis inference for large-scale galaxy clustering", - "topics": [ - "galaxy-clustering", - "cosmological-inference", - "large-scale-structure-cosmology" - ] + "uid": "github/PacificBiosciences/pbbam", + "url": "https://github.com/PacificBiosciences/pbbam", + "rel": "/software/repository/github/PacificBiosciences/pbbam", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "PacBio BAM C++ library", + "topics": [] }, { - "uid": "github/MikeSWang/Triumvirate", - "url": "https://github.com/MikeSWang/Triumvirate", - "rel": "/software/repository/github/MikeSWang/Triumvirate", - "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", - "description": "A Python/C++ package for three-point clustering measurements in LSS analyses", - "topics": [ - "python", - "cpp", - "cosmology", - "cython" - ] + "uid": "github/PacificBiosciences/pbbioconda", + "url": "https://github.com/PacificBiosciences/pbbioconda", + "rel": "/software/repository/github/PacificBiosciences/pbbioconda", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "PacBio Secondary Analysis Tools on Bioconda", + "topics": [] }, { - "uid": "github/MikeSWang/HorizonGRound", - "url": "https://github.com/MikeSWang/HorizonGRound", - "rel": "/software/repository/github/MikeSWang/HorizonGRound", - "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", - "description": "Relativistic effects in ultra-large-scale galaxy clustering", + "uid": "github/PacificBiosciences/HiPhase", + "url": "https://github.com/PacificBiosciences/HiPhase", + "rel": "/software/repository/github/PacificBiosciences/HiPhase", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads", "topics": [ - "large-scale-structure-cosmology", - "galaxy-clustering", - "cosmological-parameters", - "relativistic-effects" + "hifi", + "phasing", + "structural-variants", + "variants", + "pacbio-data", + "short-tandem-repeats" ] }, { - "uid": "github/mishioo/tesliper", - "url": "https://github.com/mishioo/tesliper", - "rel": "/software/repository/github/mishioo/tesliper", - "avatar": "https://avatars.githubusercontent.com/u/28956908?v=4", - "description": "Theoretical Spectroscopist's Little Helper", - "topics": [ - "python", - "chemistry", - "spectroscopy", - "chemical-computing", - "optical-spectroscopy", - "spectral-simulations", - "gaussian", - "workflow-automation", - "batch-processing" - ] + "uid": "github/PacificBiosciences/kineticsTools", + "url": "https://github.com/PacificBiosciences/kineticsTools", + "rel": "/software/repository/github/PacificBiosciences/kineticsTools", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "Tools for detecting DNA modifications from single molecule, real-time sequencing data", + "topics": [] }, { - "uid": "github/sidiwang/snSMART", - "url": "https://github.com/sidiwang/snSMART", - "rel": "/software/repository/github/sidiwang/snSMART", - "avatar": "https://avatars.githubusercontent.com/u/56009989?v=4", - "description": "small n sequential multiple assignment randomized trial (snSMART)", + "uid": "github/PacificBiosciences/pbcopper", + "url": "https://github.com/PacificBiosciences/pbcopper", + "rel": "/software/repository/github/PacificBiosciences/pbcopper", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "Core C++ library for data structures, algorithms, and utilities", + "topics": [] + }, + { + "uid": "github/PacificBiosciences/minorseq", + "url": "https://github.com/PacificBiosciences/minorseq", + "rel": "/software/repository/github/PacificBiosciences/minorseq", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "Minor Variant Calling and Phasing Tools", "topics": [ - "bayesian-analysis", - "clinical-trials", - "r", - "rare-disease", - "small-sample" + "minor-variant", + "haplotypes", + "phasing", + "drug-resistance", + "statistics", + "next-generation-sequencing", + "long-read", + "pacbio" ] }, { - "uid": "github/Siegel-Lab/BioSmoother", - "url": "https://github.com/Siegel-Lab/BioSmoother", - "rel": "/software/repository/github/Siegel-Lab/BioSmoother", - "avatar": "https://avatars.githubusercontent.com/u/124569893?v=4", - "description": "On-the-fly processing and visualization of interactome data", + "uid": "github/PacificBiosciences/IsoSeq", + "url": "https://github.com/PacificBiosciences/IsoSeq", + "rel": "/software/repository/github/PacificBiosciences/IsoSeq", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads", "topics": [ - "bioinformatics", - "data-visualization", - "hi-c", - "interactome-sequencing", - "radicl-seq", - "grid-seq" + "pacbio", + "rna", + "clustering", + "polishing", + "isoforms", + "discovery" ] }, { - "uid": "github/csb5/lofreq", - "url": "https://github.com/CSB5/lofreq", - "rel": "/software/repository/github/csb5/lofreq", - "avatar": "https://avatars.githubusercontent.com/u/3702229?v=4", - "description": "LoFreq Star: Sensitive variant calling from sequencing data", + "uid": "github/PacificBiosciences/pbalign", + "url": null, + "rel": "/software/repository/github/PacificBiosciences/pbalign", + "avatar": "", + "description": "pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file will be compatible with Quiver if --forQuiver option is specified.", "topics": [] }, { - "uid": "github/ipython/ipython", - "url": "https://github.com/ipython/ipython", - "rel": "/software/repository/github/ipython/ipython", - "avatar": "https://avatars3.githubusercontent.com/u/230453?v=4", - "description": "Official repository for IPython itself. Other repos in the IPython organization contain things like the website, documentation builds, etc.", + "uid": "github/PacificBiosciences/pbcore", + "url": "https://github.com/PacificBiosciences/pbcore", + "rel": "/software/repository/github/PacificBiosciences/pbcore", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "A Python library for reading and writing PacBio\u00ae data files", + "topics": [] + }, + { + "uid": "github/PacificBiosciences/pbmm2", + "url": "https://github.com/PacificBiosciences/pbmm2", + "rel": "/software/repository/github/PacificBiosciences/pbmm2", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "A minimap2 frontend for PacBio native data formats", + "topics": [] + }, + { + "uid": "github/SPARC-FAIR-Codeathon/aqua", + "url": "https://github.com/SPARC-FAIR-Codeathon/aqua", + "rel": "/software/repository/github/SPARC-FAIR-Codeathon/aqua", + "avatar": "https://avatars.githubusercontent.com/u/86933347?v=4", + "description": "Advanced Query Architecture for the SPARC Portal.", "topics": [ - "ipython", - "jupyter", - "data-science", - "notebook", - "python", - "repl" + "nlp", + "search-engine", + "machine-learning", + "hackathon", + "scigraph", + "docker" ] }, { - "uid": "github/SESMG/SESMG", - "url": "https://github.com/SESMG/SESMG", - "rel": "/software/repository/github/SESMG/SESMG", - "avatar": "https://avatars.githubusercontent.com/u/122264954?v=4", - "description": "Model generator for the optimization of energy systems, based on the modeling framework oemof. No programming skills are required to use it, as the parameters are entered using spreadsheets (e.g. Excel, LibreOffice).", + "uid": "github/Cristianetaniguti/Reads2Map", + "url": "https://github.com/Cristianetaniguti/Reads2Map", + "rel": "/software/repository/github/Cristianetaniguti/Reads2Map", + "avatar": "https://avatars.githubusercontent.com/u/7572527?v=4", + "description": "WDL workflows to build genetic maps from sequencing reads", + "topics": [ + "genotyping-by-sequencing", + "haplotypes", + "linkage-mapping", + "pipelines", + "variant-calling", + "wdl" + ] + }, + { + "uid": "github/AlmaasLab/csdR", + "url": "https://github.com/AlmaasLab/csdR", + "rel": "/software/repository/github/AlmaasLab/csdR", + "avatar": "https://avatars.githubusercontent.com/u/62121167?v=4", + "description": "Efficient CSD implementation in R", "topics": [] }, { - "uid": "github/ChrisBeaumont/brut", - "url": "https://github.com/ChrisBeaumont/brut", - "rel": "/software/repository/github/ChrisBeaumont/brut", - "avatar": "https://avatars.githubusercontent.com/u/796752?v=4", - "description": "Machine Learning on the Milky Way Project DR1", + "uid": "github/NumericalMathematics/PositiveIntegrators.jl", + "url": "https://github.com/NumericalMathematics/PositiveIntegrators.jl", + "rel": "/software/repository/github/NumericalMathematics/PositiveIntegrators.jl", + "avatar": "https://avatars.githubusercontent.com/u/202252210?v=4", + "description": "A Julia library of positivity-preserving time integration methods", "topics": [] }, { - "uid": "github/nipy/heudiconv", - "url": "https://github.com/nipy/heudiconv", - "rel": "/software/repository/github/nipy/heudiconv", - "avatar": "https://avatars.githubusercontent.com/u/233707?v=4", - "description": "Flexible DICOM conversion into structured directory layouts", + "uid": "github/labxscut/ksak", + "url": "https://github.com/labxscut/ksak", + "rel": "/software/repository/github/labxscut/ksak", + "avatar": "https://avatars.githubusercontent.com/u/114787145?v=4", + "description": null, "topics": [] }, { - "uid": "github/LindleyLentati/TempoNest", - "url": "https://github.com/LindleyLentati/TempoNest", - "rel": "/software/repository/github/LindleyLentati/TempoNest", - "avatar": "https://avatars.githubusercontent.com/u/3535163?v=4", - "description": "Bayesian analysis tool for pulsar timing", + "uid": "github/demorest/nanopipe", + "url": "https://github.com/demorest/nanopipe", + "rel": "/software/repository/github/demorest/nanopipe", + "avatar": "https://avatars.githubusercontent.com/u/159985?v=4", + "description": "Calibration and TOA generation scripts for NANOGrav data", "topics": [] }, { - "uid": "github/LindleyLentati/Cobra", - "url": "https://github.com/LindleyLentati/Cobra", - "rel": "/software/repository/github/LindleyLentati/Cobra", - "avatar": "https://avatars.githubusercontent.com/u/3535163?v=4", - "description": "Bayesian Pulsar Searching", + "uid": "github/rkingsbury/pyEQL", + "url": "https://github.com/KingsburyLab/pyEQL", + "rel": "/software/repository/github/rkingsbury/pyEQL", + "avatar": "https://avatars.githubusercontent.com/u/107872527?v=4", + "description": "A Python library for solution chemistry", "topics": [] }, { - "uid": "github/aabdurrouf/piXedfit", - "url": "https://github.com/aabdurrouf/piXedfit", - "rel": "/software/repository/github/aabdurrouf/piXedfit", - "avatar": "https://avatars.githubusercontent.com/u/45021817?v=4", - "description": "piXedfit is a Python package designed for analyzing spatially resolved SEDs of galaxies ", + "uid": "github/jepegit/cellpy", + "url": "https://github.com/jepegit/cellpy", + "rel": "/software/repository/github/jepegit/cellpy", + "avatar": "https://avatars.githubusercontent.com/u/16334959?v=4", + "description": "extract and tweak data from electrochemical tests of cells", "topics": [ - "astrophysics", - "galaxies", - "astronomical-images", - "astronomical-spectroscopy", - "pixel-binning", - "sed-fitting" + "chemistry", + "electrochemistry", + "physics", + "data-analysis", + "opensource", + "battery" ] }, { - "uid": "github/NarlikarLab/exoDIVERSITY", - "url": "https://github.com/NarlikarLab/exoDIVERSITY", - "rel": "/software/repository/github/NarlikarLab/exoDIVERSITY", - "avatar": "https://avatars.githubusercontent.com/u/14049800?v=4", + "uid": "github/MichaelAbdul-Masih/SPAMMS", + "url": "https://github.com/MichaelAbdul-Masih/SPAMMS", + "rel": "/software/repository/github/MichaelAbdul-Masih/SPAMMS", + "avatar": "https://avatars.githubusercontent.com/u/40573575?v=4", "description": null, "topics": [] }, { - "uid": "github/jcorbino/mole", - "url": "https://github.com/jcorbino/mole", - "rel": "/software/repository/github/jcorbino/mole", - "avatar": "https://avatars.githubusercontent.com/u/24197859?v=4", - "description": "Mimetic Operators Library Enhanced", + "uid": "github/pmeier/pystiche", + "url": "https://github.com/pmeier/pystiche", + "rel": "/software/repository/github/pmeier/pystiche", + "avatar": "https://avatars0.githubusercontent.com/u/6849766?v=4", + "description": "Framework for Neural Style Transfer (NST) built upon PyTorch", "topics": [ - "pde", - "vector-calculus", - "numerical-methods", - "finite-differences", - "mimetic" + "python", + "neural-style-transfer", + "framework", + "pytorch" ] }, { - "uid": "github/fkoehlin/montepython_2cosmos_public", - "url": "https://github.com/fkoehlin/montepython_2cosmos_public", - "rel": "/software/repository/github/fkoehlin/montepython_2cosmos_public", - "avatar": "https://avatars.githubusercontent.com/u/11902084?v=4", - "description": "Public repository for the Monte Python Code modified to work with two independent cosmological parameter sets and independent cosmological calculations per likelihood.", + "uid": "github/qboxcode/qbox-public", + "url": "https://github.com/qboxcode/qbox-public", + "rel": "/software/repository/github/qboxcode/qbox-public", + "avatar": "https://avatars.githubusercontent.com/u/13824137?v=4", + "description": "Qbox public repository", "topics": [] }, { - "uid": "github/aroffringa/aartfaac2ms", - "url": "https://github.com/aroffringa/aartfaac2ms", - "rel": "/software/repository/github/aroffringa/aartfaac2ms", - "avatar": "https://avatars.githubusercontent.com/u/11645549?v=4", - "description": "Converts Aartfaac correlator files to measurement sets", + "uid": "github/fraserw/TRIPPy", + "url": "https://github.com/fraserw/trippy", + "rel": "/software/repository/github/fraserw/TRIPPy", + "avatar": "https://avatars.githubusercontent.com/u/6462654?v=4", + "description": "Python based Trailed Source Photometry", "topics": [] }, { - "uid": "github/vishwas1984/LaplaceInterpolation.jl", - "url": "https://github.com/vishwas1984/LaplaceInterpolation.jl", - "rel": "/software/repository/github/vishwas1984/LaplaceInterpolation.jl", - "avatar": "https://avatars.githubusercontent.com/u/29146465?v=4", - "description": null, + "uid": "github/vicruiser/3Dmapper", + "url": "https://github.com/vicruiser/3Dmapper", + "rel": "/software/repository/github/vicruiser/3Dmapper", + "avatar": "https://avatars.githubusercontent.com/u/14994349?v=4", + "description": "Map genetic variants and protein positions to protein interfaces in 3D", "topics": [] }, { - "uid": "github/scikit-tda/DREiMac", - "url": "https://github.com/scikit-tda/DREiMac", - "rel": "/software/repository/github/scikit-tda/DREiMac", - "avatar": "https://avatars.githubusercontent.com/u/41389769?v=4", - "description": "Dimensionality Reduction with Eilenberg-MacLane Coordinates", + "uid": "github/davidaknowles/leafcutter", + "url": "https://github.com/davidaknowles/leafcutter", + "rel": "/software/repository/github/davidaknowles/leafcutter", + "avatar": "https://avatars.githubusercontent.com/u/4521734?v=4", + "description": "Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard", "topics": [] }, { - "uid": "github/lnscan/mitoSplitter", - "url": "https://github.com/lnscan/mitoSplitter", - "rel": "/software/repository/github/lnscan/mitoSplitter", - "avatar": "https://avatars.githubusercontent.com/u/63651125?v=4", - "description": null, + "uid": "github/samuelyeewl/specmatch-emp", + "url": "https://github.com/samuelyeewl/specmatch-emp", + "rel": "/software/repository/github/samuelyeewl/specmatch-emp", + "avatar": "https://avatars.githubusercontent.com/u/7497009?v=4", + "description": "Empirical SpecMatch", "topics": [] }, { - "uid": "github/daissi/thesias", - "url": "https://github.com/daissi/thesias", - "rel": "/software/repository/github/daissi/thesias", - "avatar": "https://avatars.githubusercontent.com/u/9595274?v=4", - "description": "THESIAS: Testing Haplotype Effects In Association Studies", + "uid": "github/DLTK/DLTK", + "url": "https://github.com/DLTK/DLTK", + "rel": "/software/repository/github/DLTK/DLTK", + "avatar": "https://avatars.githubusercontent.com/u/28306010?v=4", + "description": "Deep Learning Toolkit for Medical Image Analysis", "topics": [ - "bioinformatics", - "genomics", - "haplotype", - "association-studies", - "association-analysis", - "java-interface" + "deep-learning", + "machine-learning", + "neural-networks", + "tensorflow", + "medical-imaging", + "data-science", + "ml", + "deep-neural-networks", + "python", + "medical", + "dltk", + "dltk-model-zoo", + "neural-network", + "neuroimaging", + "cnn", + "medical-image-processing" ] }, { - "uid": "github/ezer/PAFway", - "url": "https://github.com/ezer/PAFway", - "rel": "/software/repository/github/ezer/PAFway", - "avatar": "https://avatars.githubusercontent.com/u/774703?v=4", - "description": "functional associations in networks", - "topics": [] - }, - { - "uid": "github/cosmo-ethz/hide", - "url": "https://github.com/cosmo-ethz/hide", - "rel": "/software/repository/github/cosmo-ethz/hide", - "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", - "description": "A package for simulating of a single dish radio telescope survey", + "uid": "github/xiaochuanle/MECAT2", + "url": "https://github.com/xiaochuanle/MECAT2", + "rel": "/software/repository/github/xiaochuanle/MECAT2", + "avatar": "https://avatars.githubusercontent.com/u/86280?v=4", + "description": "ultra-fast and accurate de novo assembly tools for SMRT reads", "topics": [] }, { - "uid": "github/cosmo-ethz/seek", - "url": "https://github.com/cosmo-ethz/seek", - "rel": "/software/repository/github/cosmo-ethz/seek", - "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", - "description": "A flexible and easy-to-extend data processing pipeline for single dish radio telescopes", + "uid": "github/BattModels/asimtools", + "url": "https://github.com/BattModels/asimtools", + "rel": "/software/repository/github/BattModels/asimtools", + "avatar": "https://avatars.githubusercontent.com/u/64616036?v=4", + "description": "Optimized workflow management and script handling for atomistic simulations", "topics": [] }, { - "uid": "github/cosmo-ethz/CosmoHammer", - "url": "https://github.com/cosmo-ethz/CosmoHammer", - "rel": "/software/repository/github/cosmo-ethz/CosmoHammer", - "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", - "description": "Cosmological parameter estimation with the MCMC Hammer, please use https://cosmo-gitlab.phys.ethz.ch/cosmo/CosmoHammer, this repository is outdated ! Docs at http://cosmo-docs.phys.ethz.ch/cosmoHammer/", + "uid": "github/Kambrian/HBTplus", + "url": "https://github.com/Kambrian/HBTplus", + "rel": "/software/repository/github/Kambrian/HBTplus", + "avatar": "https://avatars.githubusercontent.com/u/7944948?v=4", + "description": "HBT+ subhalo finder and merger tree builder, the tool to get you out of mess and back to physics.", "topics": [ + "halofinder", "cosmology", - "outdated", - "eth-zurich", - "markov-chains" + "merger-tree", + "subhalo", + "hbt", + "dark-matter", + "astrophysics", + "simulation" ] }, { - "uid": "github/CPM-project/MCPM", - "url": "https://github.com/CPM-project/MCPM", - "rel": "/software/repository/github/CPM-project/MCPM", - "avatar": "https://avatars.githubusercontent.com/u/32932681?v=4", - "description": "Modified CPM method", + "uid": "github/reneshbedre/bioinfokit", + "url": "https://github.com/reneshbedre/bioinfokit", + "rel": "/software/repository/github/reneshbedre/bioinfokit", + "avatar": "https://avatars.githubusercontent.com/u/37003729?v=4", + "description": "The bioinfokit toolkit aims to provide various easy-to-use functionalities to analyze, visualize, and interpret the biological data generated from genome-scale omics experiments.", "topics": [] }, { - "uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", - "url": "https://github.com/Critical-Infrastructure-Systems-Lab/PowNet", - "rel": "/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", - "avatar": "https://avatars.githubusercontent.com/u/133989297?v=4", - "description": "PowNet: Network-constrained Unit Commitment / Economic Dispatch model in Python", + "uid": "github/openmopac/MOPAC", + "url": "https://github.com/openmopac/mopac", + "rel": "/software/repository/github/openmopac/MOPAC", + "avatar": "https://avatars.githubusercontent.com/u/83091952?v=4", + "description": "Molecular Orbital PACkage", "topics": [ - "power-system-analysis", - "unit-commitment", - "economic-dispatch", - "transmission", - "dc-flow", - "n-1-criterion", - "water-energy-nexus", - "python", - "dispatchable-units", - "renewable-resources", - "electricity-supply", - "substations" + "quantum-chemistry", + "electronic-structure", + "molecular-orbital-theory", + "semiempirical-methods" ] }, { - "uid": "github/amiralih/MembraneAnalysis.jl", - "url": "https://github.com/amiralih/MembraneAnalysis.jl", - "rel": "/software/repository/github/amiralih/MembraneAnalysis.jl", - "avatar": "https://avatars.githubusercontent.com/u/13348763?v=4", - "description": "A package for analyzing molecular dynamics simulations of lipid membranes", - "topics": [] - }, - { - "uid": "github/AlgoLab/shark", - "url": "https://github.com/AlgoLab/shark", - "rel": "/software/repository/github/AlgoLab/shark", - "avatar": "https://avatars1.githubusercontent.com/u/449800?v=4", - "description": "Mapping-free filtering of irrelevant RNA-Seq reads", - "topics": [ - "bioinformatics", - "rna-seq", - "alignment-free", - "filtering" - ] - }, - { - "uid": "github/MesserLab/SLiM", - "url": "https://github.com/MesserLab/SLiM", - "rel": "/software/repository/github/MesserLab/SLiM", - "avatar": "https://avatars.githubusercontent.com/u/10171238?v=4", - "description": "SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.", - "topics": [ - "slim" - ] - }, - { - "uid": "github/ECSHackWeek/impedance.py", - "url": "https://github.com/ECSHackWeek/impedance.py", - "rel": "/software/repository/github/ECSHackWeek/impedance.py", - "avatar": "https://avatars2.githubusercontent.com/u/32744210?v=4", - "description": "A Python package for working with electrochemical impedance data", - "topics": [ - "impedance", - "lithium-ion", - "battery", - "electrochemistry", - "fuel-cell", - "corrosion" - ] - }, - { - "uid": "github/bio-phys/asyncmd", - "url": "https://github.com/bio-phys/asyncmd", - "rel": "/software/repository/github/bio-phys/asyncmd", - "avatar": "https://avatars.githubusercontent.com/u/30295439?v=4", - "description": "asyncmd is a library to write concurrent code to run and analyze molecular dynamics simulations using pythons async/await syntax. Computationally costly operations can be performed locally or submitted to a queuing system.", - "topics": [ - "enhanced-sampling", - "molecular-dynamics", - "molecular-dynamics-simulation", - "slurm", - "slurm-cluster" - ] - }, - { - "uid": "github/bio-phys/BioEn", - "url": "https://github.com/bio-phys/BioEn", - "rel": "/software/repository/github/bio-phys/BioEn", - "avatar": "https://avatars2.githubusercontent.com/u/30295439?v=4", - "description": "BioEn - Bayesian Inference Of ENsembles", - "topics": [ - "biological-simulations", - "molecular-dynamics", - "electron-paramagnetic-resonance", - "structural-biology", - "nmr", - "xray-scattering-experiments", - "bayesian-inference", - "deer", - "peldor", - "data-integration", - "saxs" - ] - }, - { - "uid": "github/lgrcia/nuance", - "url": "https://github.com/lgrcia/nuance", - "rel": "/software/repository/github/lgrcia/nuance", - "avatar": "https://avatars.githubusercontent.com/u/20612771?v=4", - "description": "Efficient detection of planets transiting quiet or active stars", - "topics": [ - "correlated-noise", - "data-analysis", - "exoplanets", - "search", - "systematics", - "transits", - "variability" - ] - }, - { - "uid": "github/lgrcia/prose", - "url": "https://github.com/lgrcia/prose", - "rel": "/software/repository/github/lgrcia/prose", - "avatar": "https://avatars.githubusercontent.com/u/20612771?v=4", - "description": "A python framework to process FITS images. Built for Astronomy.", - "topics": [ - "python", - "astronomy", - "photometry", - "pipeline" - ] - }, - { - "uid": "github/nansencenter/DAPPER", - "url": "https://github.com/nansencenter/DAPPER", - "rel": "/software/repository/github/nansencenter/DAPPER", - "avatar": "https://avatars.githubusercontent.com/u/5212513?v=4", - "description": "Data Assimilation with Python: a Package for Experimental Research", - "topics": [ - "data-assimilation", - "enkf", - "kalman-filtering", - "state-estimation", - "particle-filter", - "kalman", - "bayesian-methods", - "bayesian-filter", - "chaos" - ] - }, - { - "uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", - "url": "https://github.com/IlianPihlajamaa/ModeCouplingTheory.jl", - "rel": "/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", - "avatar": "https://avatars.githubusercontent.com/u/73794090?v=4", - "description": "A generic and fast solver of mode-coupling theory-like integrodifferential equations", - "topics": [ - "differential-equations", - "julia" - ] - }, - { - "uid": "github/nyusngroup/pyMCZ", - "url": "https://github.com/nyusngroup/pyMCZ", - "rel": "/software/repository/github/nyusngroup/pyMCZ", - "avatar": "https://avatars.githubusercontent.com/u/8115653?v=4", - "description": "montecarlo sampling method to calculate metalicity from flux data", - "topics": [] - }, - { - "uid": "github/itpplasma/GORILLA", - "url": "https://github.com/itpplasma/GORILLA", - "rel": "/software/repository/github/itpplasma/GORILLA", - "avatar": "https://avatars.githubusercontent.com/u/48486978?v=4", - "description": "GORILLA: Guiding-center ORbit Integration with Local Linearization Approach", - "topics": [ - "fusion-reactor", - "hamiltonian-systems", - "kinetic-modeling", - "numerical-integration", - "numerical-methods", - "plasma-physics", - "simulation", - "stellarator", - "tokamak", - "guiding-center" - ] - }, - { - "uid": "github/darioizzo/dcgp", - "url": "https://github.com/darioizzo/dcgp", - "rel": "/software/repository/github/darioizzo/dcgp", - "avatar": "https://avatars3.githubusercontent.com/u/3327087?v=4", - "description": "Implementation of a differentiable CGP (Cartesian Genetic Programming)", - "topics": [] - }, - { - "uid": "github/WhaleConnect/whaleconnect", - "url": "https://github.com/WhaleConnect/whaleconnect", - "rel": "/software/repository/github/WhaleConnect/whaleconnect", - "avatar": "https://avatars.githubusercontent.com/u/174279898?v=4", - "description": "Cross-platform network communication software", - "topics": [] - }, - { - "uid": "github/kcleal/gw", - "url": "https://github.com/kcleal/gw", - "rel": "/software/repository/github/kcleal/gw", - "avatar": "https://avatars.githubusercontent.com/u/42997789?v=4", - "description": "Genome browser and variant annotation", - "topics": [ - "annotation-tool", - "vcf", - "bam-files", - "cram-files", - "genome-browser" - ] - }, - { - "uid": "github/kcleal/dysgu", - "url": "https://github.com/kcleal/dysgu", - "rel": "/software/repository/github/kcleal/dysgu", - "avatar": "https://avatars.githubusercontent.com/u/42997789?v=4", - "description": "Toolkit for calling structural variants using short or long reads", - "topics": [ - "genomics", - "bioinformatics", - "structural-variation", - "variant-calling", - "paired-end", - "long-read", - "structural", - "variant" - ] - }, - { - "uid": "github/mikejohnson51/AHGestimation", - "url": "https://github.com/mikejohnson51/AHGestimation", - "rel": "/software/repository/github/mikejohnson51/AHGestimation", - "avatar": "https://avatars.githubusercontent.com/u/30052272?v=4", - "description": "Estimating robust, mass conserving AHG relationships", - "topics": [] - }, - { - "uid": "github/RiccardoBiondi/segmentation", - "url": "https://github.com/RiccardoBiondi/segmentation", - "rel": "/software/repository/github/RiccardoBiondi/segmentation", - "avatar": "https://avatars.githubusercontent.com/u/48323959?v=4", - "description": "COVID-19 Lung Segmentation", - "topics": [ - "ct-images", - "lung-regions", - "covid-19", - "segmentation" - ] - }, - { - "uid": "github/pedro-acunha/SHEEP", - "url": "https://github.com/pedro-acunha/SHEEP", - "rel": "/software/repository/github/pedro-acunha/SHEEP", - "avatar": "https://avatars.githubusercontent.com/u/53006840?v=4", - "description": "Machine Learning pipeline to classify astronomical sources into galaxies, quasars and stars using photometric data.", - "topics": [ - "astronomy", - "astronomy-software", - "classification", - "machine-learning", - "photometric-redshifts", - "photometry" - ] - }, - { - "uid": "github/TommasoRonconi/scampy", - "url": "https://github.com/TommasoRonconi/scampy", - "rel": "/software/repository/github/TommasoRonconi/scampy", - "avatar": "https://avatars.githubusercontent.com/u/38346844?v=4", - "description": "A Python API for Sub-halo Clustering and Abundance Matching", - "topics": [] - }, - { - "uid": "github/hyex-research/AquaFetch", - "url": "https://github.com/hyex-research/AquaFetch", - "rel": "/software/repository/github/hyex-research/AquaFetch", - "avatar": "https://avatars.githubusercontent.com/u/144527953?v=4", - "description": "A Unified Python Interface for Water Resource Data Acquisition", - "topics": [ - "big-data", - "database", - "hydrology", - "wastewater-treatment", - "water", - "water-quality" - ] - }, - { - "uid": "github/DavidT3/DAXA", - "url": "https://github.com/DavidT3/DAXA", - "rel": "/software/repository/github/DavidT3/DAXA", - "avatar": "https://avatars.githubusercontent.com/u/17744555?v=4", - "description": "Democratising Archival X-ray Astronomy (DAXA) is an easy-to-use Python module for downloading multi-mission X-ray telescope data and processing it into usable archives. Users can acquire entire archives, or filter observations based on ID/positions/time. Supports XMM; partial support eROSITA, Chandra, NuSTAR, Swift, Suzaku, ASCA, ROSAT, INTEGRAL", - "topics": [ - "astronomy", - "astrophysics", - "python", - "x-ray-astronomy", - "xmm", - "chandra", - "erosita", - "xga", - "archival-astronomy", - "nustar", - "rosat", - "asca", - "integral", - "suzaku", - "swift" - ] - }, - { - "uid": "github/DavidT3/XGA", - "url": "https://github.com/DavidT3/XGA", - "rel": "/software/repository/github/DavidT3/XGA", - "avatar": "https://avatars.githubusercontent.com/u/17744555?v=4", - "description": "X-ray: Generate and Analyse is a module designed to make the analysis of XMM observations simple and efficient. It provides an interface with SAS for the creation of XMM data products, as well as a way to easily perform fits (scalable for multiple observations) and retrieve information about an object, all within a Python package. ", - "topics": [ - "xga", - "xmm", - "xmm-science-analysis", - "xspec", - "xmm-observations", - "sas", - "heasoft", - "x-ray", - "astrophysics", - "astronomy", - "galaxy-clusters", - "x-ray-astronomy" - ] - }, - { - "uid": "github/denglab/SeqSero", - "url": "https://github.com/denglab/SeqSero", - "rel": "/software/repository/github/denglab/SeqSero", - "avatar": "https://avatars.githubusercontent.com/u/10891728?v=4", - "description": "Salmonella serotyping from genome sequencing data", - "topics": [] - }, - { - "uid": "github/jmejia8/Metaheuristics.jl", - "url": "https://github.com/jmejia8/Metaheuristics.jl", - "rel": "/software/repository/github/jmejia8/Metaheuristics.jl", - "avatar": "https://avatars.githubusercontent.com/u/9757256?v=4", - "description": "High-performance metaheuristics for optimization coded purely in Julia.", - "topics": [ - "optimization", - "multi-objective-optimization", - "differential-evolution", - "simulated-annealing", - "pso", - "nsga2", - "constrained-optimization", - "hypervolume", - "decision-making" - ] - }, - { - "uid": "github/ixakalabadie/ViSL3D", - "url": "https://github.com/ixakalabadie/ViSL3D", - "rel": "/software/repository/github/ixakalabadie/ViSL3D", - "avatar": "https://avatars.githubusercontent.com/u/71155566?v=4", - "description": "Python library to create interactive 3D visualisations of astrophysical spectral line data.", - "topics": [ - "3d", - "astrophysics", - "datacube", - "spectral-lines", - "visualisation", - "interac" - ] - }, - { - "uid": "github/UCD4IDS/WaveletsExt.jl", - "url": "https://github.com/UCD4IDS/WaveletsExt.jl", - "rel": "/software/repository/github/UCD4IDS/WaveletsExt.jl", - "avatar": "https://avatars.githubusercontent.com/u/82732920?v=4", - "description": "A Julia extension package to Wavelets.jl", - "topics": [ - "julia", - "wavelet-transform", - "signal-processing", - "wavelet", - "filter", - "ac-wavelets", - "stationary-wavelets" - ] - }, - { - "uid": "github/morrowcj/remotePARTS", - "url": "https://github.com/morrowcj/remotePARTS", - "rel": "/software/repository/github/morrowcj/remotePARTS", - "avatar": "https://avatars.githubusercontent.com/u/25436787?v=4", - "description": "remotePARTS is a set of tools for running Partitioned spatio-temporal auto regression analyses on remotely-sensed data sets. ", - "topics": [ - "remote-sensing-in-r", - "statistical-analysis", - "big-data", - "autocorrelation" - ] - }, - { - "uid": "github/esheldon/ngmix", - "url": "https://github.com/esheldon/ngmix", - "rel": "/software/repository/github/esheldon/ngmix", - "avatar": "https://avatars.githubusercontent.com/u/621661?v=4", - "description": "Gaussian mixtures and image processing implemented in python", - "topics": [ - "python", - "image-processing", - "c" - ] - }, - { - "uid": "github/PavlidisLab/Gemma", - "url": "https://github.com/PavlidisLab/Gemma", - "rel": "/software/repository/github/PavlidisLab/Gemma", - "avatar": "https://avatars.githubusercontent.com/u/25695421?v=4", - "description": "Genomics data re-analysis", - "topics": [ - "bioinformatics", - "genomics" - ] - }, - { - "uid": "github/abaleato/CARDiAC", - "url": "https://github.com/abaleato/CARDiAC", - "rel": "/software/repository/github/abaleato/CARDiAC", - "avatar": "https://avatars.githubusercontent.com/u/48951377?v=4", - "description": "Code for Anisotropic Redshift Distributions in Angular Clustering", - "topics": [] - }, - { - "uid": "github/russelllab/wesa", - "url": "https://github.com/russelllab/wesa", - "rel": "/software/repository/github/russelllab/wesa", - "avatar": "https://avatars.githubusercontent.com/u/44021207?v=4", - "description": "WeSA (Weighted SocioAffinity): a tool for improving affinity proteomics data.", - "topics": [ - "flask-application", - "protein-protein-interaction", - "proteomics-data-analysis", - "visualization" - ] - }, - { - "uid": "github/RBrearton/islatu", - "url": "https://github.com/RBrearton/islatu", - "rel": "/software/repository/github/RBrearton/islatu", - "avatar": "https://avatars.githubusercontent.com/u/82819976?v=4", - "description": "X-ray reflectometry reduction from Diamond Light Source", - "topics": [] - }, - { - "uid": "github/idruglab/hignn", - "url": "https://github.com/idrugLab/hignn", - "rel": "/software/repository/github/idruglab/hignn", - "avatar": "https://avatars.githubusercontent.com/u/58386268?v=4", - "description": "Code for \"HiGNN: A Hierarchical Informative Graph Neural Network for Molecular Property Prediction Equipped with Feature-Wise Attention\"", - "topics": [] - }, - { - "uid": "github/Hyperthetical/DarkMatters", - "url": "https://github.com/Hyperthetical/DarkMatters", - "rel": "/software/repository/github/Hyperthetical/DarkMatters", - "avatar": "https://avatars.githubusercontent.com/u/35954338?v=4", - "description": "Multi-frequency emissions from dark matter annihilation/decay", - "topics": [] - }, - { - "uid": "github/AlexandrosAntoniadis/ODUSSEAS", - "url": "https://github.com/AlexandrosAntoniadis/ODUSSEAS", - "rel": "/software/repository/github/AlexandrosAntoniadis/ODUSSEAS", - "avatar": "https://avatars.githubusercontent.com/u/32932882?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/sonoUnoTeam/sonoUno-desktop", - "url": "https://github.com/sonoUnoTeam/sonoUno-desktop", - "rel": "/software/repository/github/sonoUnoTeam/sonoUno-desktop", - "avatar": "https://avatars.githubusercontent.com/u/51083952?v=4", - "description": "SonoUno is a sonification software for astronomical data presented on a table (txt or csv files). The software is being developed based on the study of other software, standards of accessibility like the ISO 9241-171:2008 (Guidance on software accessibility) and theoretical framework based on literature review and end user tests.", - "topics": [] - }, - { - "uid": "github/benstahl92/deepSIP", - "url": "https://github.com/benstahl92/deepSIP", - "rel": "/software/repository/github/benstahl92/deepSIP", - "avatar": "https://avatars.githubusercontent.com/u/13010209?v=4", - "description": "Deep Learning of Supernova Ia Parameters", - "topics": [ - "supernovae", - "supernova-ia-identification", - "deep-learning", - "convolutional-neural-networks", - "transients", - "astronomy", - "astrophysics", - "spectra", - "cosmology" - ] - }, - { - "uid": "github/kungfugo/BellDiagonalQudits.jl", - "url": "https://github.com/kungfugo/BellDiagonalQudits.jl", - "rel": "/software/repository/github/kungfugo/BellDiagonalQudits.jl", - "avatar": "https://avatars.githubusercontent.com/u/91735193?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/libgamera/GAMERA", - "url": "https://github.com/libgamera/GAMERA", - "rel": "/software/repository/github/libgamera/GAMERA", - "avatar": "https://avatars.githubusercontent.com/u/48202577?v=4", - "description": "A C++/python library for source modeling in gamma astronomy", - "topics": [] - }, - { - "uid": "github/baoxingsong/AnchorWave", - "url": "https://github.com/baoxingsong/AnchorWave", - "rel": "/software/repository/github/baoxingsong/AnchorWave", - "avatar": "https://avatars.githubusercontent.com/u/18551962?v=4", - "description": "Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation", - "topics": [ - "genome", - "genome-alignment" - ] - }, - { - "uid": "github/Bioinformatics-Munich/scas_dashboard", - "url": "https://github.com/Bioinformatics-Munich/scas_dashboard", - "rel": "/software/repository/github/Bioinformatics-Munich/scas_dashboard", - "avatar": "https://avatars.githubusercontent.com/u/116272517?v=4", - "description": "SCAS dashboard: A tool to intuitively and interactively analyze Slurm cluster usage", - "topics": [] - }, - { - "uid": "github/robbievanleeuwen/section-properties", - "url": "https://github.com/robbievanleeuwen/section-properties", - "rel": "/software/repository/github/robbievanleeuwen/section-properties", - "avatar": "https://avatars.githubusercontent.com/u/18841910?v=4", - "description": "Analysis of an arbitrary cross-section in python using the finite element method.", - "topics": [ - "structural-engineering", - "finite-element-analysis", - "finite-element-method", - "computational-mechanics", - "python", - "cross-section", - "stress-analysis" - ] - }, - { - "uid": "github/gui11aume/starcode", - "url": "https://github.com/gui11aume/starcode", - "rel": "/software/repository/github/gui11aume/starcode", - "avatar": "https://avatars.githubusercontent.com/u/1017195?v=4", - "description": "All pairs search and sequence clustering", - "topics": [] - }, - { - "uid": "github/akcochrane/TEfits", - "url": "https://github.com/akcochrane/TEfits", - "rel": "/software/repository/github/akcochrane/TEfits", - "avatar": "https://avatars2.githubusercontent.com/u/56330575?v=4", - "description": "R package for streamlined nonlinear regression", - "topics": [] - }, - { - "uid": "github/pec27/hfof", - "url": "https://github.com/pec27/hfof", - "rel": "/software/repository/github/pec27/hfof", - "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", - "description": "Friends-of-Friends via spatial hashing", - "topics": [] - }, - { - "uid": "github/pec27/lizard", - "url": "https://github.com/pec27/lizard", - "rel": "/software/repository/github/pec27/lizard", - "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", - "description": "lizard is an open-source code for the creation of particle initial conditions for cosmological simulations", - "topics": [] - }, - { - "uid": "github/pec27/smerfs", - "url": "https://github.com/pec27/smerfs", - "rel": "/software/repository/github/pec27/smerfs", - "avatar": "https://avatars.githubusercontent.com/u/2505317?v=4", - "description": "Creating large realisations of random fields on the sphere", - "topics": [] - }, - { - "uid": "github/agree019/DarkCapPy", - "url": "https://github.com/agree019/DarkCapPy", - "rel": "/software/repository/github/agree019/DarkCapPy", - "avatar": "https://avatars.githubusercontent.com/u/21072814?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/JulioHC00/PEPITA", - "url": "https://github.com/JulioHC00/PEPITA", - "rel": "/software/repository/github/JulioHC00/PEPITA", - "avatar": "https://avatars.githubusercontent.com/u/81090346?v=4", - "description": "Prediction of Exoplanet Precisions using Information in Transit Analysis", - "topics": [ - "data-science", - "exoplanets", - "transits" - ] - }, - { - "uid": "github/SISPO-developers/sispo", - "url": "https://github.com/SISPO-developers/sispo", - "rel": "/software/repository/github/SISPO-developers/sispo", - "avatar": "https://avatars.githubusercontent.com/u/64485559?v=4", - "description": "Space Imaging Simulator for Proximity Operations (SISPO)", - "topics": [] - }, - { - "uid": "github/umbramortem/nProFit", - "url": "https://github.com/umbramortem/nProFit", - "rel": "/software/repository/github/umbramortem/nProFit", - "avatar": "https://avatars.githubusercontent.com/u/5048671?v=4", - "description": "Tool for analysis of surface brightness profiles", - "topics": [] - }, - { - "uid": "github/hoechenberger/questplus", - "url": "https://github.com/hoechenberger/questplus", - "rel": "/software/repository/github/hoechenberger/questplus", - "avatar": "https://avatars.githubusercontent.com/u/2046265?v=4", - "description": "A QUEST+ implementation in Python.", - "topics": [ - "psychophysics", - "psychology" - ] - }, - { - "uid": "github/avigan/SPHERE", - "url": "https://github.com/avigan/SPHERE", - "rel": "/software/repository/github/avigan/SPHERE", - "avatar": "https://avatars.githubusercontent.com/u/29944664?v=4", - "description": "Reduction and analysis code for the VLT/SPHERE instrument", - "topics": [] - }, - { - "uid": "github/avigan/pyZELDA", - "url": "https://github.com/avigan/pyZELDA", - "rel": "/software/repository/github/avigan/pyZELDA", - "avatar": "https://avatars.githubusercontent.com/u/29944664?v=4", - "description": "Zernike wavefront sensor analysis and simulation tools", - "topics": [] - }, - { - "uid": "github/JetBrains-Research/spbla", - "url": "https://github.com/JetBrains-Research/spbla", - "rel": "/software/repository/github/JetBrains-Research/spbla", - "avatar": "https://avatars.githubusercontent.com/u/10167268?v=4", - "description": "Sparse Boolean linear algebra for Nvidia Cuda, OpenCL and CPU computations", - "topics": [ - "cplusplus", - "sparse-matrix", - "boolean-algebra", - "cuda", - "opencl", - "graphblas", - "suitesparse", - "python", - "graph-algorithms" - ] - }, - { - "uid": "github/MariaTsantaki/FASMA-synthesis", - "url": "https://github.com/MariaTsantaki/FASMA-synthesis", - "rel": "/software/repository/github/MariaTsantaki/FASMA-synthesis", - "avatar": "https://avatars.githubusercontent.com/u/9470245?v=4", - "description": "Python code for stellar spectral analysis", - "topics": [] - }, - { - "uid": "github/johncwok/CategoricalTimeSeries.jl", - "url": "https://github.com/johncwok/CategoricalTimeSeries.jl", - "rel": "/software/repository/github/johncwok/CategoricalTimeSeries.jl", - "avatar": "https://avatars.githubusercontent.com/u/34754896?v=4", - "description": "Toolbox for categorical time-series analysis.", - "topics": [ - "categorical-data", - "time-series-analysis", - "julia" - ] - }, - { - "uid": "github/edgardomortiz/Captus", - "url": "https://github.com/edgardomortiz/Captus", - "rel": "/software/repository/github/edgardomortiz/Captus", - "avatar": "https://avatars.githubusercontent.com/u/5767612?v=4", - "description": "Assembly of Phylogenomic Datasets from High-Throughput Sequencing data", - "topics": [ - "ngs", - "phylogenomics", - "alignment", - "genome-skimming", - "high-throughput-sequencing", - "hybridization-capture", - "next-generation-sequencing", - "phylogenetics", - "rna-seq", - "whole-genome-sequencing", - "phylotranscriptomics", - "targeted-capture", - "orthologs", - "paralogs" - ] - }, - { - "uid": "github/creaneroDIAS/beamModelTester", - "url": "https://github.com/creaneroDIAS/beamModelTester", - "rel": "/software/repository/github/creaneroDIAS/beamModelTester", - "avatar": "https://avatars.githubusercontent.com/u/35535656?v=4", - "description": "a general-purpose tool for evaluation of models of radio telescope beams.", - "topics": [] - }, - { - "uid": "github/profjsb/deepCR", - "url": "https://github.com/profjsb/deepCR", - "rel": "/software/repository/github/profjsb/deepCR", - "avatar": "https://avatars.githubusercontent.com/u/480799?v=4", - "description": "Deep Learning Based Cosmic Ray Removal for Astronomical Images", - "topics": [ - "astronomy", - "deep-learning", - "pytorch", - "python3", - "convolutional-neural-networks", - "astronomical-images" - ] - }, - { - "uid": "github/gdrouart/MrMoose", - "url": "https://github.com/gdrouart/MrMoose", - "rel": "/software/repository/github/gdrouart/MrMoose", - "avatar": "https://avatars.githubusercontent.com/u/22902215?v=4", - "description": "MrMoose is a Spectral Energy Distribution fitting procedure using a Bayesian framework. In a nutshell, this code allows to fit user-defined models onto a set of multi-wavelength data, making use of spatial information and upper-limits with a consistent treatment. The code is highly flexible to allow its use for sources with complex structures.", - "topics": [ - "fitting", - "astronomy", - "statistics" - ] - }, - { - "uid": "github/introlab/opentera", - "url": "https://github.com/introlab/opentera", - "rel": "/software/repository/github/introlab/opentera", - "avatar": "https://avatars.githubusercontent.com/u/1263458?v=4", - "description": "OpenTera - Open TeleRehabilitation Server and Micro-Services", - "topics": [ - "python", - "server", - "healthcare", - "iot", - "telerehabilitation", - "telepresence", - "videoconference", - "micro-services", - "webrtc", - "redis", - "flask", - "twisted", - "robotics" - ] - }, - { - "uid": "github/tqsd/photon_weave", - "url": "https://github.com/tqsd/photon_weave", - "rel": "/software/repository/github/tqsd/photon_weave", - "avatar": "https://avatars.githubusercontent.com/u/56349211?v=4", - "description": "Photon Weave", - "topics": [ - "optics", - "quantum-optics", - "quantum-simulator", - "jax", - "quantum", - "quantum-computing", - "quantum-physics", - "quantum-optics-simulation" - ] - }, - { - "uid": "github/bioinfodlsu/phage-host-prediction", - "url": "https://github.com/bioinfodlsu/phage-host-prediction", - "rel": "/software/repository/github/bioinfodlsu/phage-host-prediction", - "avatar": "https://avatars.githubusercontent.com/u/121936683?v=4", - "description": "Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding proteins of phages. It presents improvements over using handcrafted sequence properties and eliminates the need to manually extract and select features from phage sequences", + "uid": "github/RenneLab/hybkit", + "url": "https://github.com/RenneLab/hybkit", + "rel": "/software/repository/github/RenneLab/hybkit", + "avatar": "https://avatars.githubusercontent.com/u/34487862?v=4", + "description": "Toolkit for analysis of \".hyb\" format nucleotide sequence data from chimeric RNA experiments.", "topics": [ - "bioinformatics", "genomics", - "phage-host-prediction", - "protein", - "protein-embedding", - "protein-language-model", - "proteomics", - "representation-learning", - "transfer-learning", - "transformer", - "machine-learning" - ] - }, - { - "uid": "github/bioinfodlsu/PHIStruct", - "url": "https://github.com/bioinfodlsu/PHIStruct", - "rel": "/software/repository/github/bioinfodlsu/PHIStruct", - "avatar": "https://avatars.githubusercontent.com/u/121936683?v=4", - "description": "Published in Bioinformatics. Phage-host interaction prediction tool that incorporates protein structure information in representing receptor-binding proteins (RBPs). It improves performance especially for phages with RBPs that have low sequence similarity to those of known phages", - "topics": [ "bioinformatics", - "deep-learning", - "genomics", - "machine-learning", - "phage-host-prediction", - "protein", - "protein-embedding", - "protein-language-model", - "protein-structure", - "proteomics", - "representation-learning", - "transfer-learning", - "transformer", - "alphafold", - "alphafold2" - ] - }, - { - "uid": "github/WSWUP/agweather-qaqc", - "url": "https://github.com/WSWUP/agweather-qaqc", - "rel": "/software/repository/github/WSWUP/agweather-qaqc", - "avatar": "https://avatars.githubusercontent.com/u/23201768?v=4", - "description": "Visualized QA/QC of weather station data", - "topics": [ - "evapotranspiration", - "python", - "quality-assurance", - "quality-control", - "weather-data", - "weather-station" - ] - }, - { - "uid": "github/WSWUP/gridwxcomp", - "url": "https://github.com/WSWUP/gridwxcomp", - "rel": "/software/repository/github/WSWUP/gridwxcomp", - "avatar": "https://avatars.githubusercontent.com/u/23201768?v=4", - "description": "Comparison of weather station and gridded climate datasets", - "topics": [ - "bias-correction", - "climate", - "data", - "gridded", - "spatial-analysis", - "weather" - ] - }, - { - "uid": "github/wonderful1/CNV-PG", - "url": "https://github.com/wonderful1/CNV-PG", - "rel": "/software/repository/github/wonderful1/CNV-PG", - "avatar": "https://avatars.githubusercontent.com/u/19549825?v=4", - "description": "CNV-PG: a machine-learning framework for accurate copy number variation predicting and genotyping", - "topics": [] - }, - { - "uid": "github/insilico/cncv", - "url": "https://github.com/insilico/cncv", - "rel": "/software/repository/github/insilico/cncv", - "avatar": "https://avatars.githubusercontent.com/u/412493?v=4", - "description": "Consensus Nested Cross-Validation", - "topics": [] - }, - { - "uid": "github/jteutenberg/downpore", - "url": "https://github.com/jteutenberg/downpore", - "rel": "/software/repository/github/jteutenberg/downpore", - "avatar": "https://avatars.githubusercontent.com/u/1536537?v=4", - "description": "a suite of tools for use in genome assembly and consensus.", - "topics": [ - "genome-assembly", - "long-read", - "genome-scaffolding", - "genome-mapping" + "bioinformatics-tool", + "bioinformatics-pipeline", + "ribonomics", + "hyb", + "clash", + "qclash" ] }, { - "uid": "github/QEF/q-e", - "url": "https://github.com/QEF/q-e", - "rel": "/software/repository/github/QEF/q-e", - "avatar": "https://avatars.githubusercontent.com/u/5255480?v=4", - "description": "Mirror of the Quantum ESPRESSO repository. Please do not post Issues or pull requests here. Use gitlab.com/QEF/q-e instead.", + "uid": "github/cole-trapnell-lab/monocle3", + "url": "https://github.com/cole-trapnell-lab/monocle3", + "rel": "/software/repository/github/cole-trapnell-lab/monocle3", + "avatar": "https://avatars.githubusercontent.com/u/8060918?v=4", + "description": "An analysis toolkit for single-cell RNA-seq.", "topics": [ - "quantum-espresso" + "single-cell-rna-seq" ] }, { - "uid": "github/subisarkar/JexoSim", - "url": "https://github.com/subisarkar/JexoSim", - "rel": "/software/repository/github/subisarkar/JexoSim", - "avatar": "https://avatars.githubusercontent.com/u/10596082?v=4", - "description": "JexoSim (JWST Exoplanet Observation Simulator) 2.0, is a time-domain simulator of JWST exoplanet transit observations.", - "topics": [] - }, - { - "uid": "github/ericsteinbring/World_Observatory", - "url": "https://github.com/ericsteinbring/World_Observatory", - "rel": "/software/repository/github/ericsteinbring/World_Observatory", - "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", - "description": "World Observatory visualizes S/N-versus-cost tradeoffs for large optical/near-infrared telescopes.", - "topics": [] - }, - { - "uid": "github/ericsteinbring/Special-Blurring", - "url": "https://github.com/ericsteinbring/Special-Blurring", - "rel": "/software/repository/github/ericsteinbring/Special-Blurring", - "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", - "description": "Calculates the effect of quantum-foam blurring, appropriate for the special gamma-ray burst GRB221009A.", - "topics": [] - }, - { - "uid": "github/ericsteinbring/PDQ", - "url": "https://github.com/ericsteinbring/PDQ", - "rel": "/software/repository/github/ericsteinbring/PDQ", - "avatar": "https://avatars.githubusercontent.com/u/127259226?v=4", - "description": "The IDL code PDQ predicts the positions on the sky of high-redshift quasars that should provide photons that are both acausal and uncorrelated. The best dates and times for viewing those simultaneously with Gemini `Alopeke/Zorro (for high-framerate photometry) in the coming semester are reported. ", + "uid": "github/cole-trapnell-lab/cufflinks", + "url": "https://github.com/cole-trapnell-lab/cufflinks", + "rel": "/software/repository/github/cole-trapnell-lab/cufflinks", + "avatar": "https://avatars.githubusercontent.com/u/8060918?v=4", + "description": "a reference-guided assembler that assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.", "topics": [] }, { - "uid": "github/sheinasim/HiFiAdapterFilt", - "url": "https://github.com/sheinasim/HiFiAdapterFilt", - "rel": "/software/repository/github/sheinasim/HiFiAdapterFilt", - "avatar": "https://avatars.githubusercontent.com/u/7445687?v=4", - "description": "Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).", + "uid": "github/neuralgraphs/diman", + "url": "https://github.com/neuralgraphs/diman", + "rel": "/software/repository/github/neuralgraphs/diman", + "avatar": "https://avatars.githubusercontent.com/u/39004804?v=4", + "description": "A Clojure library for applying dimensional analysis.", "topics": [] }, { - "uid": "github/mmore500/hstrat", - "url": "https://github.com/mmore500/hstrat", - "rel": "/software/repository/github/mmore500/hstrat", - "avatar": "https://avatars.githubusercontent.com/u/10763333?v=4", - "description": "hstrat enables phylogenetic inference on distributed digital evolution populations", + "uid": "github/JLSteenwyk/ggpubfigs", + "url": "https://github.com/JLSteenwyk/ggpubfigs", + "rel": "/software/repository/github/JLSteenwyk/ggpubfigs", + "avatar": "https://avatars.githubusercontent.com/u/17225603?v=4", + "description": "colorblind friendly color palettes and ggplot2 graphic system extensions for publication-quality scientific figures", "topics": [] }, { - "uid": "github/Cambridge-ICCS/FTorch", - "url": "https://github.com/Cambridge-ICCS/FTorch", - "rel": "/software/repository/github/Cambridge-ICCS/FTorch", - "avatar": "https://avatars.githubusercontent.com/u/97293575?v=4", - "description": "A library for directly calling PyTorch ML models from Fortran.", + "uid": "github/JacobBumgarner/VesselVio", + "url": "https://github.com/JacobBumgarner/VesselVio", + "rel": "/software/repository/github/JacobBumgarner/VesselVio", + "avatar": "https://avatars.githubusercontent.com/u/70919881?v=4", + "description": "VesselVio is an open-source application for the analysis and visualization of segmented vasculature datasets", "topics": [ - "fortran", - "pytorch", - "machine-learning", - "deep-learning", - "interoperability", - "torch", - "python", - "hacktoberfest" + "open-source", + "visualization", + "analysis" ] }, { - "uid": "github/CTU-Bern/presize", - "url": "https://github.com/CTU-Bern/presize", - "rel": "/software/repository/github/CTU-Bern/presize", - "avatar": "https://avatars.githubusercontent.com/u/45794307?v=4", - "description": "Precision Based Sample Size Calculation", - "topics": [] - }, - { - "uid": "github/sybila/biodivine-aeon-py", - "url": "https://github.com/sybila/biodivine-aeon-py", - "rel": "/software/repository/github/sybila/biodivine-aeon-py", - "avatar": "https://avatars.githubusercontent.com/u/748023?v=4", - "description": null, + "uid": "github/nanakiksc/zerone", + "url": "https://github.com/nanakiksc/zerone", + "rel": "/software/repository/github/nanakiksc/zerone", + "avatar": "https://avatars.githubusercontent.com/u/5763571?v=4", + "description": "ChIP-seq discretization and quality control", "topics": [] }, { - "uid": "github/murphycj/AGFusion", - "url": "https://github.com/murphycj/AGFusion", - "rel": "/software/repository/github/murphycj/AGFusion", - "avatar": "https://avatars.githubusercontent.com/u/3837196?v=4", - "description": "Python package to annotate and visualize gene fusions.", - "topics": [ - "gene-fusion", - "protein", - "fusion", - "rna-seq", - "python", - "cancer", - "cancer-genomics", - "chimera", - "bioinformatics", - "structural-variation" - ] - }, - { - "uid": "github/rmaphoh/AutoMorph", - "url": "https://github.com/rmaphoh/AutoMorph", - "rel": "/software/repository/github/rmaphoh/AutoMorph", - "avatar": "https://avatars.githubusercontent.com/u/68285473?v=4", - "description": "vessel segmentation, artery and vein, optic disc, vascular feature analysis", + "uid": "github/CollinErickson/GauPro", + "url": "https://github.com/CollinErickson/GauPro", + "rel": "/software/repository/github/CollinErickson/GauPro", + "avatar": "https://avatars.githubusercontent.com/u/2402685?v=4", + "description": "R package for Gaussian process modeling", "topics": [] }, { - "uid": "github/shihyuntang/igrins_rv", - "url": "https://github.com/shihyuntang/igrins_rv", - "rel": "/software/repository/github/shihyuntang/igrins_rv", - "avatar": "https://avatars.githubusercontent.com/u/26864783?v=4", - "description": "Welcome to IGRINS RV, a open source pipeline for extracting radial velocity (RV) for the Immersion GRating INfrared Spectrometer (IGRINS) instrument. Please contact asa.stahl@rice.edu or sytang@lowell.edu for more detail.", + "uid": "github/Goobley/Radynversion", + "url": "https://github.com/Goobley/Radynversion", + "rel": "/software/repository/github/Goobley/Radynversion", + "avatar": "https://avatars.githubusercontent.com/u/9143392?v=4", + "description": "Inverting Solar Flare Observations with Invertible Neural Nets (with RADYN physics) ", "topics": [] }, { - "uid": "github/Gaius-Augustus/GALBA", - "url": "https://github.com/Gaius-Augustus/GALBA", - "rel": "/software/repository/github/Gaius-Augustus/GALBA", - "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", - "description": "GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from a closely related species are available.", + "uid": "github/tcassanelli/pywpf", + "url": "https://github.com/tcassanelli/pywpf", + "rel": "/software/repository/github/tcassanelli/pywpf", + "avatar": "https://avatars.githubusercontent.com/u/8934433?v=4", + "description": "The purpose of this program is to see the effectivity and efficiency that a PCA folding analysis has compared to the Epoch Folding, which is the standard used for pulsar period computations.", "topics": [] }, { - "uid": "github/Gaius-Augustus/Tiberius", - "url": "https://github.com/Gaius-Augustus/Tiberius", - "rel": "/software/repository/github/Gaius-Augustus/Tiberius", - "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", - "description": "deep learning gene finder", + "uid": "github/manulera/OpenCloning_frontend", + "url": "https://github.com/manulera/OpenCloning_frontend", + "rel": "/software/repository/github/manulera/OpenCloning_frontend", + "avatar": "https://avatars.githubusercontent.com/u/22526102?v=4", + "description": "The frontend application for OpenCloning", "topics": [] }, { - "uid": "github/Gaius-Augustus/BRAKER", - "url": "https://github.com/Gaius-Augustus/BRAKER", - "rel": "/software/repository/github/Gaius-Augustus/BRAKER", - "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", - "description": "BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes", + "uid": "github/ngltr/sinaps", + "url": "https://github.com/ngltr/sinaps", + "rel": "/software/repository/github/ngltr/sinaps", + "avatar": "https://avatars.githubusercontent.com/u/49352943?v=4", + "description": null, "topics": [] }, { - "uid": "github/Computational-NeuroGenetics/deMeta-beta", - "url": "https://github.com/Computational-NeuroGenetics/deMeta-beta", - "rel": "/software/repository/github/Computational-NeuroGenetics/deMeta-beta", - "avatar": "https://avatars.githubusercontent.com/u/69991253?v=4", - "description": null, + "uid": "github/lucadimascolo/socca", + "url": "https://github.com/lucadimascolo/socca", + "rel": "/software/repository/github/lucadimascolo/socca", + "avatar": "https://avatars.githubusercontent.com/u/18384197?v=4", + "description": "Source Characterization using a Composable Analysis", "topics": [] }, { - "uid": "github/vgteam/vg", - "url": "https://github.com/vgteam/vg", - "rel": "/software/repository/github/vgteam/vg", - "avatar": "https://avatars.githubusercontent.com/u/15925452?v=4", - "description": "tools for working with genome variation graphs", + "uid": "github/hugoledoux/startinpy", + "url": "https://github.com/hugoledoux/startinpy", + "rel": "/software/repository/github/hugoledoux/startinpy", + "avatar": "https://avatars.githubusercontent.com/u/1546518?v=4", + "description": "A Python library for modelling and processing 2.5D terrains using a (2D) Delaunay triangulation.", "topics": [ - "variation-graph", - "graph", - "genome-graph", - "genomics", - "dna" + "gis", + "interpolation", + "terrain", + "tin", + "delaunay-triangulation" ] }, { - "uid": "github/vgteam/vg#vg", - "url": "https://github.com/vgteam/vg", - "rel": "/software/repository/github/vgteam/vg#vg", - "avatar": "https://avatars.githubusercontent.com/u/15925452?v=4", - "description": "tools for working with genome variation graphs", + "uid": "github/dpryan79/libBigWig", + "url": "https://github.com/dpryan79/libBigWig", + "rel": "/software/repository/github/dpryan79/libBigWig", + "avatar": "https://avatars.githubusercontent.com/u/6399000?v=4", + "description": "A C library for handling bigWig files", "topics": [ - "variation-graph", - "graph", - "genome-graph", - "genomics", - "dna" + "bigbed", + "bigwig", + "bioinformatics" ] }, { - "uid": "github/RandyRDavila/GraphCalc", - "url": "https://github.com/RandyRDavila/GraphCalc", - "rel": "/software/repository/github/RandyRDavila/GraphCalc", - "avatar": "https://avatars.githubusercontent.com/u/33989989?v=4", - "description": "A repository for computation of graph invariants", + "uid": "github/dpryan79/MethylDackel", + "url": "https://github.com/dpryan79/MethylDackel", + "rel": "/software/repository/github/dpryan79/MethylDackel", + "avatar": "https://avatars.githubusercontent.com/u/6399000?v=4", + "description": "A (mostly) universal methylation extractor for BS-seq experiments.", "topics": [ - "graphs-theory", - "optimization" + "methylation", + "bioinformatics", + "methylation-extraction", + "bisulfite" ] }, { - "uid": "github/palaimon/ipyannotator", - "url": "https://github.com/palaimon/ipyannotator", - "rel": "/software/repository/github/palaimon/ipyannotator", - "avatar": "https://avatars.githubusercontent.com/u/58658888?v=4", - "description": "the infinitely hackable annotation framework", + "uid": "github/dpryan79/pyBigWig", + "url": "https://github.com/deeptools/pyBigWig", + "rel": "/software/repository/github/dpryan79/pyBigWig", + "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", + "description": "A python extension for quick access to bigWig and bigBed files", "topics": [ - "ipycanvas", - "nbdev", - "ipywidgets", - "voila", - "labeling", - "annotations", - "labeling-tool", - "annotation-tool" - ] - }, - { - "uid": "github/tortellini-tools/action", - "url": "https://github.com/tortellini-tools/action", - "rel": "/software/repository/github/tortellini-tools/action", - "avatar": "https://avatars.githubusercontent.com/u/84508231?v=4", - "description": "GH action to check dependency licence issues using ort", - "topics": [] - }, - { - "uid": "github/lbr-stack/lbr_stack_doc", - "url": "https://github.com/lbr-stack/lbr_stack_doc", - "rel": "/software/repository/github/lbr-stack/lbr_stack_doc", - "avatar": "https://avatars.githubusercontent.com/u/129968146?v=4", - "description": "Documentation for the LBR-Stack", - "topics": [] - }, - { - "uid": "github/elixir-luxembourg/daisy", - "url": "https://github.com/elixir-luxembourg/daisy", - "rel": "/software/repository/github/elixir-luxembourg/daisy", - "avatar": "https://avatars2.githubusercontent.com/u/47946340?v=4", - "description": "Data Information System (DAISY) is a data bookkeeping application designed to help Biomedical Research institutions with their GDPR compliance.", - "topics": [] + "bigwig", + "bioinfomatics", + "bigbed" + ] }, { - "uid": "github/geckos-survey/ngist", - "url": "https://github.com/geckos-survey/ngist", - "rel": "/software/repository/github/geckos-survey/ngist", - "avatar": "https://avatars.githubusercontent.com/u/114988409?v=4", - "description": null, + "uid": "github/kiyo-masui/bitshuffle", + "url": "https://github.com/kiyo-masui/bitshuffle", + "rel": "/software/repository/github/kiyo-masui/bitshuffle", + "avatar": "https://avatars.githubusercontent.com/u/399263?v=4", + "description": "Filter for improving compression of typed binary data.", "topics": [] }, { - "uid": "github/yuliang419/AstroNet-Triage", - "url": "https://github.com/yuliang419/Astronet-Triage", - "rel": "/software/repository/github/yuliang419/AstroNet-Triage", - "avatar": "https://avatars.githubusercontent.com/u/10563003?v=4", - "description": "A Neural Network for TESS Light Curve Triage", + "uid": "github/sklasfeld/DANPOS3", + "url": "https://github.com/sklasfeld/DANPOS3", + "rel": "/software/repository/github/sklasfeld/DANPOS3", + "avatar": "https://avatars.githubusercontent.com/u/7339712?v=4", + "description": "a toolkit for Dynamic Analysis of Nucleosome and Protein Occupancy by Sequencing.", "topics": [] }, { - "uid": "github/yuliang419/AstroNet-Vetting", - "url": "https://github.com/yuliang419/Astronet-Vetting", - "rel": "/software/repository/github/yuliang419/AstroNet-Vetting", - "avatar": "https://avatars.githubusercontent.com/u/10563003?v=4", - "description": "A Neural Network for TESS Light Curve Vetting", + "uid": "github/yuliadm/mixComp", + "url": "https://github.com/yuliadm/mixComp", + "rel": "/software/repository/github/yuliadm/mixComp", + "avatar": "https://avatars.githubusercontent.com/u/103601311?v=4", + "description": null, "topics": [] }, { - "uid": "github/geospace-code/h5fortran", - "url": "https://github.com/geospace-code/h5fortran", - "rel": "/software/repository/github/geospace-code/h5fortran", - "avatar": "https://avatars.githubusercontent.com/u/61321120?v=4", - "description": "Lightweight HDF5 polymorphic Fortran: h5write() h5read()", + "uid": "github/gavinsimpson/gratia", + "url": "https://github.com/gavinsimpson/gratia", + "rel": "/software/repository/github/gavinsimpson/gratia", + "avatar": "https://avatars.githubusercontent.com/u/514696?v=4", + "description": "ggplot-based graphics and useful functions for GAMs fitted using the mgcv package", "topics": [ - "fortran2018", - "hdf5", - "hdf5-wrapper", - "modern-fortran", - "object-oriented-fortran" + "r-package", + "generalized-additive-models", + "ggplot2", + "mgcv", + "gam", + "glm", + "lm", + "random-effects", + "smoothing", + "r" ] }, { - "uid": "github/felixchenier/kineticstoolkit", - "url": "https://github.com/felixchenier/kineticstoolkit", - "rel": "/software/repository/github/felixchenier/kineticstoolkit", - "avatar": "https://avatars.githubusercontent.com/u/34967663?v=4", - "description": "Kinetics Toolkit is an open-source, pure-python package of integrated classes and functions that aims to facilitate research in biomechanics using python.", + "uid": "github/Rformassspectrometry/Spectra", + "url": "https://github.com/rformassspectrometry/Spectra", + "rel": "/software/repository/github/Rformassspectrometry/Spectra", + "avatar": "https://avatars.githubusercontent.com/u/51361942?v=4", + "description": "Low level infrastructure to handle MS spectra", "topics": [ - "biomechanics", - "kinematics", - "toolbox", - "api", - "python", - "kinetics" + "rstats", + "mass-spectrometry", + "proteomics", + "metabolomics", + "bioconductor", + "hacktoberfest" ] }, { - "uid": "github/bccp/nbodykit", - "url": "https://github.com/bccp/nbodykit", - "rel": "/software/repository/github/bccp/nbodykit", - "avatar": "https://avatars.githubusercontent.com/u/11237396?v=4", - "description": "Analysis kit for large-scale structure datasets, the massively parallel way", + "uid": "github/aspuru-guzik-group/funsies", + "url": "https://github.com/aspuru-guzik-group/funsies", + "rel": "/software/repository/github/aspuru-guzik-group/funsies", + "avatar": "https://avatars.githubusercontent.com/u/29867355?v=4", + "description": "funsies is a lightweight workflow engine \ud83d\udd27", "topics": [ - "astrophysics", - "cosmology", - "large-scale-structure", - "clustering", - "data-analysis", + "workflow-engine", "python", - "mpi", - "mpi4py", - "parallel-computing" + "infrastructure", + "automation", + "data-ops", + "data-engineering", + "redis", + "hashtree" ] }, { - "uid": "github/TeaspoonTDA/teaspoon", - "url": "https://github.com/TeaspoonTDA/teaspoon", - "rel": "/software/repository/github/TeaspoonTDA/teaspoon", - "avatar": "https://avatars.githubusercontent.com/u/123311460?v=4", - "description": "Topological Signal Processing in Python", + "uid": "github/sncosmo/sncosmo", + "url": "https://github.com/sncosmo/sncosmo", + "rel": "/software/repository/github/sncosmo/sncosmo", + "avatar": "https://avatars.githubusercontent.com/u/5490746?v=4", + "description": "Python library for supernova cosmology", "topics": [ - "persistent-homology", - "persistent-homology-graphs", - "signal-processing", - "tda", - "topological-data-analysis", - "topological-signal-processing", "python", - "tda-python" - ] - }, - { - "uid": "github/BobChallen/Basic-mzml-plotter", - "url": "https://github.com/BobChallen/Basic-mzml-plotter", - "rel": "/software/repository/github/BobChallen/Basic-mzml-plotter", - "avatar": "https://avatars.githubusercontent.com/u/122879668?v=4", - "description": "A very basic mzml file plotting program that can plot single scans, merge all scans from a file, plot the TIC, and plot an EIC of a chosen m/z value.", - "topics": [ - "mass-spectrometry", - "massspectrometry", - "mzml", - "mzml-files", - "plotting-in-python" + "supernovae", + "cosmology", + "astronomy", + "astrophysics" ] }, { - "uid": "github/AusSRC/SoFiAX", - "url": "https://github.com/AusSRC/SoFiAX", - "rel": "/software/repository/github/AusSRC/SoFiAX", - "avatar": "https://avatars.githubusercontent.com/u/62991148?v=4", - "description": "Source finding application executor", + "uid": "github/leirufeng/iEnhancer-DCSV", + "url": "https://github.com/leirufeng/iEnhancer-DCSV", + "rel": "/software/repository/github/leirufeng/iEnhancer-DCSV", + "avatar": "https://avatars.githubusercontent.com/u/65327942?v=4", + "description": null, "topics": [] }, { - "uid": "github/zhwm/SparsePro_Paper", - "url": "https://github.com/zhwm/SparsePro_Paper", - "rel": "/software/repository/github/zhwm/SparsePro_Paper", - "avatar": "https://avatars.githubusercontent.com/u/30612712?v=4", - "description": "Code repo for SparsePro Paper", + "uid": "github/liniguez/Insplico_simulations", + "url": "https://github.com/liniguez/Insplico_simulations", + "rel": "/software/repository/github/liniguez/Insplico_simulations", + "avatar": "https://avatars.githubusercontent.com/u/36859003?v=4", + "description": null, "topics": [] }, { - "uid": "github/ParBLiSS/FastANI", - "url": "https://github.com/ParBLiSS/FastANI", - "rel": "/software/repository/github/ParBLiSS/FastANI", - "avatar": "https://avatars.githubusercontent.com/u/16827085?v=4", - "description": "Fast Whole-Genome Similarity (ANI) Estimation", - "topics": [ - "microbial-genomics" - ] + "uid": "github/teoxxx/nemiss_pbl", + "url": "https://github.com/teoxxx/nemiss_pbl", + "rel": "/software/repository/github/teoxxx/nemiss_pbl", + "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", + "description": "nemiss neutrino emission from hydrocode data describing a simulated stellar binary system", + "topics": [] }, { - "uid": "github/hamers/tpi", - "url": "https://github.com/hamers/tpi", - "rel": "/software/repository/github/hamers/tpi", - "avatar": "https://avatars.githubusercontent.com/u/25057380?v=4", - "description": "Test Particle Integrator: integrate test particles around a massive black hole", + "uid": "github/teoxxx/nemiss_proper", + "url": "https://github.com/teoxxx/nemiss_proper", + "rel": "/software/repository/github/teoxxx/nemiss_proper", + "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", + "description": "nemiss code repo 2023", "topics": [] }, { - "uid": "github/hamers/secularmultiple", - "url": "https://github.com/hamers/secularmultiple", - "rel": "/software/repository/github/hamers/secularmultiple", - "avatar": "https://avatars.githubusercontent.com/u/25057380?v=4", - "description": "Code to model the secular evolution of a hierarchical multiple system", + "uid": "github/teoxxx/rlos", + "url": "https://github.com/teoxxx/rlos", + "rel": "/software/repository/github/teoxxx/rlos", + "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", + "description": "RLOS Relativistic Line of Sight, time-resolved imaging of model astrophysical jets", "topics": [] }, { - "uid": "github/3d-pli/fastpli", - "url": "https://github.com/3d-pli/fastpli", - "rel": "/software/repository/github/3d-pli/fastpli", - "avatar": "https://avatars.githubusercontent.com/u/51479655?v=4", - "description": "Fiber Architecture Simulation Toolbox for 3D Polarized Light Imaging", + "uid": "github/agree019/DarkCapPy", + "url": "https://github.com/agree019/DarkCapPy", + "rel": "/software/repository/github/agree019/DarkCapPy", + "avatar": "https://avatars.githubusercontent.com/u/21072814?v=4", + "description": null, "topics": [] }, { - "uid": "github/Lbalkenhol/candl", - "url": "https://github.com/Lbalkenhol/candl", - "rel": "/software/repository/github/Lbalkenhol/candl", - "avatar": "https://avatars.githubusercontent.com/u/30681063?v=4", - "description": "Differentiable Likelihood for CMB Analysis", + "uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", + "url": "https://github.com/JuliaGeodynamics/GeophysicalModelGenerator.jl", + "rel": "/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", + "avatar": "https://avatars.githubusercontent.com/u/84014489?v=4", + "description": "Import, process and interpret geophysical data sets to be used in numerical models.", "topics": [] }, { - "uid": "github/voting-tools/pref_voting", - "url": "https://github.com/voting-tools/pref_voting", - "rel": "/software/repository/github/voting-tools/pref_voting", - "avatar": "https://avatars.githubusercontent.com/u/118827404?v=4", - "description": "pref_voting is a Python package that can be used to study and run elections with different preferential voting methods (graded voting methods and cardinal voting methods are also included for comparison). ", + "uid": "github/tseemann/abricate", + "url": "https://github.com/tseemann/abricate", + "rel": "/software/repository/github/tseemann/abricate", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes", "topics": [ - "computational-social-choice", - "preferences", - "preferential-voting", - "python3", - "research-tool", - "social-choice-theory", - "utility-functions", - "voting", - "voting-methods" + "antimicrobial-resistance-genes", + "virulence-genes", + "contigs", + "bioinformatics-tool", + "genomic-regions" ] }, { - "uid": "github/bluenote-1577/fairy", - "url": "https://github.com/bluenote-1577/fairy", - "rel": "/software/repository/github/bluenote-1577/fairy", - "avatar": "https://avatars.githubusercontent.com/u/12787948?v=4", - "description": "alignment-free coverage calculation for metagenomic binning >100 times faster ", + "uid": "github/tseemann/VelvetOptimiser", + "url": "https://github.com/tseemann/VelvetOptimiser", + "rel": "/software/repository/github/tseemann/VelvetOptimiser", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":chart_with_upwards_trend: Automatically optimise three of Velvet's assembly parameters.", "topics": [] }, { - "uid": "github/bluenote-1577/sylph", - "url": "https://github.com/bluenote-1577/sylph", - "rel": "/software/repository/github/bluenote-1577/sylph", - "avatar": "https://avatars.githubusercontent.com/u/12787948?v=4", - "description": "ultrafast ANI querying and taxonomic profiling for metagenomic shotgun samples by abundance-corrected minhash.", + "uid": "github/tseemann/shovill", + "url": "https://github.com/tseemann/shovill", + "rel": "/software/repository/github/tseemann/shovill", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": "\u26a1\u2660\ufe0f Assemble bacterial isolate genomes from Illumina paired-end reads", "topics": [ - "average-nucleotide-identity", - "k-mer", - "metagenomics", - "sketching-algorithm", - "taxonomic-classification" + "genome-assembler", + "illumina-sequencing", + "pipelines" ] }, { - "uid": "github/aibhleog/baryon-sweep", - "url": "https://github.com/aibhleog/baryon-sweep", - "rel": "/software/repository/github/aibhleog/baryon-sweep", - "avatar": "https://avatars.githubusercontent.com/u/13223263?v=4", - "description": "a custom outlier rejection algorithm for JWST/NIRSpec IFS data, described in Hutchison et al. (submitted to PASP)", - "topics": [] - }, - { - "uid": "github/percolator/percolator", - "url": "https://github.com/percolator/percolator", - "rel": "/software/repository/github/percolator/percolator", - "avatar": "https://avatars.githubusercontent.com/u/95488?v=4", - "description": "Semi-supervised learning for peptide identification from shotgun proteomics datasets ", - "topics": [] - }, - { - "uid": "github/igvteam/igv-reports", - "url": "https://github.com/igvteam/igv-reports", - "rel": "/software/repository/github/igvteam/igv-reports", - "avatar": "https://avatars.githubusercontent.com/u/11527111?v=4", - "description": "Python application to generate self-contained pages embedding IGV visualizations, with no dependency on original input files.", + "uid": "github/tseemann/mlst", + "url": "https://github.com/tseemann/mlst", + "rel": "/software/repository/github/tseemann/mlst", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":id: Scan contig files against PubMLST typing schemes", "topics": [] }, { - "uid": "github/octopus-sensing/octopus-sensing", - "url": "https://github.com/octopus-sensing/octopus-sensing", - "rel": "/software/repository/github/octopus-sensing/octopus-sensing", - "avatar": "https://avatars.githubusercontent.com/u/87042708?v=4", - "description": null, + "uid": "github/tseemann/snippy", + "url": "https://github.com/tseemann/snippy", + "rel": "/software/repository/github/tseemann/snippy", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":scissors: :zap: Rapid haploid variant calling and core genome alignment", "topics": [ - "experience-scenarios", - "questionnaire", - "eeg", - "gsr", - "shimmer", - "ppg" + "variant-calling", + "haploid", + "bacteria", + "fastq-analysis", + "snps", + "vcf", + "indel-discovery" ] }, { - "uid": "github/fwhigh/stellar-locus-regression", - "url": "https://github.com/fwhigh/stellar-locus-regression", - "rel": "/software/repository/github/fwhigh/stellar-locus-regression", - "avatar": "https://avatars.githubusercontent.com/u/3476531?v=4", - "description": "Automatically exported from code.google.com/p/stellar-locus-regression", - "topics": [] + "uid": "github/tseemann/prokka", + "url": "https://github.com/tseemann/prokka", + "rel": "/software/repository/github/tseemann/prokka", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":zap: :aquarius: Rapid prokaryotic genome annotation", + "topics": [ + "genome-annotation", + "functional-assignment", + "bacterial-genomes", + "gene-finding" + ] }, { - "uid": "github/PathoGenOmics-Lab/get_mnv", - "url": "https://github.com/PathoGenOmics-Lab/get_MNV", - "rel": "/software/repository/github/PathoGenOmics-Lab/get_mnv", - "avatar": "https://avatars.githubusercontent.com/u/134300128?v=4", - "description": "Identifies multiple SNVs within the same codon, reclassifies them as MNVs, and accurately computes resulting amino acid changes from genomic reads", + "uid": "github/tseemann/barrnap", + "url": "https://github.com/tseemann/barrnap", + "rel": "/software/repository/github/tseemann/barrnap", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": ":microscope: :leo: Bacterial ribosomal RNA predictor", "topics": [ - "mnv", - "snv", - "annotation", - "bam", - "rust", - "snp", - "vcf" + "rna", + "hmmer", + "rnammer", + "hmm-model", + "rrna", + "annotations", + "ribosomal" ] }, { - "uid": "github/ketch/RK-Opt", - "url": "https://github.com/ketch/RK-Opt", - "rel": "/software/repository/github/ketch/RK-Opt", - "avatar": "https://avatars1.githubusercontent.com/u/697763?v=4", - "description": "A package for the design of numerical ODE solvers", + "uid": "github/tseemann/samclip", + "url": "https://github.com/tseemann/samclip", + "rel": "/software/repository/github/tseemann/samclip", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": "Filter SAM file for soft and hard clipped alignments", "topics": [] }, { - "uid": "github/ketch/nodepy", - "url": "https://github.com/ketch/nodepy", - "rel": "/software/repository/github/ketch/nodepy", - "avatar": "https://avatars1.githubusercontent.com/u/697763?v=4", - "description": "Analysis of initial value ODE solvers", + "uid": "github/tseemann/snp-dists", + "url": "https://github.com/tseemann/snp-dists", + "rel": "/software/repository/github/tseemann/snp-dists", + "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", + "description": "Pairwise SNP distance matrix from a FASTA sequence alignment", "topics": [] }, { - "uid": "github/citation-file-format/cffconvert-github-action", - "url": "https://github.com/citation-file-format/cffconvert-github-action", - "rel": "/software/repository/github/citation-file-format/cffconvert-github-action", - "avatar": "https://avatars.githubusercontent.com/u/32704278?v=4", - "description": "GitHub action to validate CITATION.cff files, and convert to other citation formats.", + "uid": "github/cosmicrays/hermes", + "url": "https://github.com/cosmicrays/hermes", + "rel": "/software/repository/github/cosmicrays/hermes", + "avatar": "https://avatars.githubusercontent.com/u/20685298?v=4", + "description": "HERMES is a publicly available computational framework for the line of sight integration over galactic radiative processes which creates sky maps in the HEALPix-compatibile format.", "topics": [ - "actions", - "cff", - "zenodo-citation-metadata", - "github-actions", - "action", - "continuous-integration", - "github-action", - "citation", - "citation-file-format" + "astroparticle-physics", + "gamma-ray-astronomy", + "neutrino-astronomy", + "synchrotron", + "cosmic-rays", + "galactic-radiative-processes", + "healpix" ] }, { - "uid": "github/citation-file-format/citation-file-format", - "url": "https://github.com/citation-file-format/citation-file-format", - "rel": "/software/repository/github/citation-file-format/citation-file-format", - "avatar": "https://avatars.githubusercontent.com/u/32704278?v=4", - "description": "The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.", + "uid": "github/cosmicrays/DRAGON", + "url": "https://github.com/cosmicrays/DRAGON", + "rel": "/software/repository/github/cosmicrays/DRAGON", + "avatar": "https://avatars.githubusercontent.com/u/20685298?v=4", + "description": "First version of the code - last update Dec 2015", "topics": [ - "citation", - "citation-files", - "credit", - "attribution", - "research-software-engineering", - "software-sustainability", - "wssspe", - "format" + "cosmic-rays", + "dark-matter", + "interstellar-medium", + "astroparticle", + "radiative-processes", + "gamma-ray-astronomy", + "neutrino-astronomy" ] }, { - "uid": "github/citation-file-format/cff-initializer-javascript", - "url": "https://github.com/citation-file-format/cff-initializer-javascript", - "rel": "/software/repository/github/citation-file-format/cff-initializer-javascript", - "avatar": "https://avatars2.githubusercontent.com/u/32704278?v=4", - "description": "Web form to initialize CITATION.cff files.", + "uid": "github/kehrlab/PopDel", + "url": "https://github.com/kehrlab/PopDel", + "rel": "/software/repository/github/kehrlab/PopDel", + "avatar": "https://avatars.githubusercontent.com/u/26654073?v=4", + "description": "Population-wide Deletion Calling", "topics": [ - "credit", - "research-software-engineering", - "citation" + "bioinformatics", + "variant-calling", + "population-genomics", + "sv-calling", + "structural-variation" ] }, { - "uid": "github/citation-file-format/cff-converter-python", - "url": "https://github.com/citation-file-format/cff-converter-python", - "rel": "/software/repository/github/citation-file-format/cff-converter-python", - "avatar": "https://avatars2.githubusercontent.com/u/32704278?v=4", - "description": "Command line utility to read CITATION.cff file from a GitHub url or local file and convert it to BibTex and other formats.", - "topics": [ - "citation", - "citation-files", - "attribution", - "software-sustainability", - "bibtex", - "endnote", - "ris", - "cff" - ] + "uid": "github/timahutchinson/redmonster", + "url": "https://github.com/timahutchinson/redmonster", + "rel": "/software/repository/github/timahutchinson/redmonster", + "avatar": "https://avatars.githubusercontent.com/u/15254667?v=4", + "description": "A project to develop a sophisticated and flexible set of Python utilities for redshift measurement, physical parameter measurement, and classification of one-dimensional astronomical spectra.", + "topics": [] }, { - "uid": "github/e-merlin/eMERLIN_CASA_pipeline", - "url": "https://github.com/e-merlin/eMERLIN_CASA_pipeline", - "rel": "/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", - "avatar": "https://avatars.githubusercontent.com/u/26597493?v=4", - "description": "This is CASA eMERLIN pipeline to calibrate data from the e-MERLIN array. Please fork the repository before making any changes and read the Coding Practices page in the wiki. Please add issues with the pipeline in the issues tab.", + "uid": "github/jgieseler/solarmach", + "url": "https://github.com/jgieseler/solarmach", + "rel": "/software/repository/github/jgieseler/solarmach", + "avatar": "https://avatars.githubusercontent.com/u/39489154?v=4", + "description": "Python package of the multi-spacecraft longitudinal configuration plotter Solar-MACH", "topics": [ - "radio-astronomy" + "esa", + "heliophysics", + "spacephysics", + "spaceweather" ] }, { - "uid": "github/BASTAcode/BASTA", - "url": "https://github.com/BASTAcode/BASTA", - "rel": "/software/repository/github/BASTAcode/BASTA", - "avatar": "https://avatars.githubusercontent.com/u/91265788?v=4", - "description": "BASTA: The BAyesian STellar Algorithm", - "topics": [] + "uid": "github/brian-lau/MatlabAUC", + "url": "https://github.com/brian-lau/MatlabAUC", + "rel": "/software/repository/github/brian-lau/MatlabAUC", + "avatar": "https://avatars.githubusercontent.com/u/5180236?v=4", + "description": "Matlab code for the area under the receiver operating curve (AUC) and confidence intervals", + "topics": [] + }, + { + "uid": "github/Exo-TiC/ExoTiC-LD", + "url": "https://github.com/Exo-TiC/ExoTiC-LD", + "rel": "/software/repository/github/Exo-TiC/ExoTiC-LD", + "avatar": "https://avatars.githubusercontent.com/u/98596129?v=4", + "description": "Limb-darkening package to calculate the coefficients for specific instruments, stars, and wavelength ranges", + "topics": [] + }, + { + "uid": "github/ranieremenezes/easyspec", + "url": "https://github.com/ranieremenezes/easyspec", + "rel": "/software/repository/github/ranieremenezes/easyspec", + "avatar": "https://avatars.githubusercontent.com/u/14879409?v=4", + "description": "The easiest way to do long-slit optical spectroscopy", + "topics": [] + }, + { + "uid": "github/ranieremenezes/easyFermi", + "url": "https://github.com/ranieremenezes/easyFermi", + "rel": "/software/repository/github/ranieremenezes/easyFermi", + "avatar": "https://avatars.githubusercontent.com/u/14879409?v=4", + "description": "The easiest way to analyze Fermi-LAT data", + "topics": [] + }, + { + "uid": "github/franpoz/SHERLOCK", + "url": "https://github.com/franpoz/SHERLOCK", + "rel": "/software/repository/github/franpoz/SHERLOCK", + "avatar": "https://avatars.githubusercontent.com/u/15654884?v=4", + "description": "Easy and versatile open-source code to explore Kepler, K2 and TESS data in the search for exoplanets", + "topics": [ + "exoplanets", + "tess", + "kepler" + ] }, { - "uid": "github/baiwenjia/ukbb_cardiac", - "url": "https://github.com/baiwenjia/ukbb_cardiac", - "rel": "/software/repository/github/baiwenjia/ukbb_cardiac", - "avatar": "https://avatars.githubusercontent.com/u/10883629?v=4", - "description": "Some code for processing and analysing UK Biobank cardiac MR images.", + "uid": "github/callendeprieto/ferre", + "url": "https://github.com/callendeprieto/ferre", + "rel": "/software/repository/github/callendeprieto/ferre", + "avatar": "https://avatars.githubusercontent.com/u/24915449?v=4", + "description": "FERRE matches physical models to measurements", "topics": [] }, { - "uid": "github/AndreyTavleev/DiscVerSt", - "url": "https://github.com/AndreyTavleev/DiscVerSt", - "rel": "/software/repository/github/AndreyTavleev/DiscVerSt", - "avatar": "https://avatars.githubusercontent.com/u/37964711?v=4", - "description": "Code calculates vertical structure of accretion discs around neutron stars and black holes.", + "uid": "github/zhwm/SparsePro_Paper", + "url": "https://github.com/zhwm/SparsePro_Paper", + "rel": "/software/repository/github/zhwm/SparsePro_Paper", + "avatar": "https://avatars.githubusercontent.com/u/30612712?v=4", + "description": "Code repo for SparsePro Paper", "topics": [] }, { - "uid": "github/SwissClinicalTrialOrganisation/secuTrialR", - "url": "https://github.com/SwissClinicalTrialOrganisation/secuTrialR", - "rel": "/software/repository/github/SwissClinicalTrialOrganisation/secuTrialR", - "avatar": "https://avatars3.githubusercontent.com/u/44496957?v=4", - "description": "Handling of data from the clinical data management system secuTrial", - "topics": [] + "uid": "github/pasteurlabs/tesseract-core", + "url": "https://github.com/pasteurlabs/tesseract-core", + "rel": "/software/repository/github/pasteurlabs/tesseract-core", + "avatar": "https://avatars.githubusercontent.com/u/94583413?v=4", + "description": "Universal, autodiff-native software components for Simulation Intelligence. \ud83d\udce6", + "topics": [ + "containers", + "differentiable-programming", + "api-rest", + "automatic-differentiation", + "remote-procedure-calls", + "scientific-machine-learning" + ] }, { - "uid": "github/shengjin/nii-c", - "url": "https://github.com/shengjin/nii-c", - "rel": "/software/repository/github/shengjin/nii-c", - "avatar": "https://avatars.githubusercontent.com/u/10437909?v=4", - "description": "The Nii-C code", + "uid": "github/MintonGroup/swiftest", + "url": "https://github.com/MintonGroup/swiftest", + "rel": "/software/repository/github/MintonGroup/swiftest", + "avatar": "https://avatars.githubusercontent.com/u/160645906?v=4", + "description": "Swiftest is a software packaged designed to model the long-term dynamical dynamics of n-body systems with a dominant central body, like the solar system. ", "topics": [] }, { - "uid": "github/shengjin/Nii", - "url": "https://github.com/shengjin/Nii", - "rel": "/software/repository/github/shengjin/Nii", - "avatar": "https://avatars.githubusercontent.com/u/10437909?v=4", - "description": "The Nii code", - "topics": [] + "uid": "github/alessiospuriomancini/cosmopower", + "url": "https://github.com/alessiospuriomancini/cosmopower", + "rel": "/software/repository/github/alessiospuriomancini/cosmopower", + "avatar": "https://avatars.githubusercontent.com/u/16155457?v=4", + "description": "Machine Learning - accelerated Bayesian inference", + "topics": [ + "machine-learning", + "deep-learning", + "tensorflow", + "cosmology", + "bayesian-inference" + ] }, { - "uid": "github/ndrakos/ICICLE", - "url": "https://github.com/ndrakos/ICICLE", - "rel": "/software/repository/github/ndrakos/ICICLE", - "avatar": "https://avatars.githubusercontent.com/u/24570695?v=4", - "description": "Initial Conditions for Isolated CoLlisionless systEms", + "uid": "github/IanevskiAleksandr/sc-type", + "url": "https://github.com/IanevskiAleksandr/sc-type", + "rel": "/software/repository/github/IanevskiAleksandr/sc-type", + "avatar": "https://avatars.githubusercontent.com/u/22654591?v=4", + "description": null, "topics": [] }, { - "uid": "github/FAU-LAP/NOMAD-CAMELS", - "url": "https://github.com/FAU-LAP/NOMAD-CAMELS", - "rel": "/software/repository/github/FAU-LAP/NOMAD-CAMELS", - "avatar": "https://avatars.githubusercontent.com/u/60480039?v=4", - "description": "We are developing a configurable measurement software (CAMELS), targeted towards the requirements of experimental solid-state physics. Here many experiments utilize a multitude of measurement devices used in dynamically changing setups.", - "topics": [] + "uid": "github/LuShenJ/PyEMILI", + "url": "https://github.com/LuShenJ/PyEMILI", + "rel": "/software/repository/github/LuShenJ/PyEMILI", + "avatar": "https://avatars.githubusercontent.com/u/56467275?v=4", + "description": "Spectral line identification tool", + "topics": [ + "line-identification" + ] }, { - "uid": "github/votca/xtp", - "url": "https://github.com/votca/xtp", - "rel": "/software/repository/github/votca/xtp", - "avatar": "https://avatars0.githubusercontent.com/u/4510560?v=4", - "description": "GW-BSE for excited state Quantum Chemistry in a Gaussian Orbital basis, electronic spectroscopy with QM/MM, charge and energy dynamics in complex molecular systems", + "uid": "github/mdolab/pygeo", + "url": "https://github.com/mdolab/pygeo", + "rel": "/software/repository/github/mdolab/pygeo", + "avatar": "https://avatars.githubusercontent.com/u/26934866?v=4", + "description": "pyGeo provides geometric design variables and constraints suitable for gradient-based optimization.", "topics": [ - "quantum-chemistry", - "gw-bse", - "quantum-classical", - "excited-states", - "multiscale-simulation", - "computational-physics", - "computational-chemistry" + "mach" ] }, { - "uid": "github/dlinssen/sunbather", - "url": "https://github.com/dlinssen/sunbather", - "rel": "/software/repository/github/dlinssen/sunbather", - "avatar": "https://avatars.githubusercontent.com/u/126874901?v=4", - "description": "Python/Cloudy package for simulating escaping exoplanet atmospheres and their transit spectra.", + "uid": "github/WatsonGroupTCD/J2suscep", + "url": "https://github.com/WatsonGroupTCD/J2suscep", + "rel": "/software/repository/github/WatsonGroupTCD/J2suscep", + "avatar": "https://avatars.githubusercontent.com/u/20184515?v=4", + "description": "See https://github.com/WatsonGroupTCD/J2suscep/wiki", "topics": [] }, { - "uid": "github/ahmedmagds/GNUVID", - "url": "https://github.com/ahmedmagds/GNUVID", - "rel": "/software/repository/github/ahmedmagds/GNUVID", - "avatar": "https://avatars.githubusercontent.com/u/18128206?v=4", - "description": "Gene Novelty Unit-based Virus Identification for SARS-CoV-2", + "uid": "github/ruta-k/uGMRT-pipeline", + "url": "https://github.com/ruta-k/uGMRT-pipeline", + "rel": "/software/repository/github/ruta-k/uGMRT-pipeline", + "avatar": "https://avatars.githubusercontent.com/u/38125415?v=4", + "description": null, "topics": [] }, { - "uid": "github/JieZheng-ShanghaiTech/PiLSL", - "url": "https://github.com/JieZheng-ShanghaiTech/PiLSL", - "rel": "/software/repository/github/JieZheng-ShanghaiTech/PiLSL", - "avatar": "https://avatars.githubusercontent.com/u/47076474?v=4", - "description": "PiLSL is a pairwise interaction learning-based graph neural network (GNN) model for prediction of synthetic lethality (SL) as anti-cancer drug targets. It learns the representation of pairwise interaction between two genes from a knowledge graph (KG).", - "topics": [ - "bioinformatics", - "data-science", - "drug-discovery", - "machine-learning" - ] + "uid": "github/sheydenreich/threepoint", + "url": "https://github.com/sheydenreich/threepoint", + "rel": "/software/repository/github/sheydenreich/threepoint", + "avatar": "https://avatars.githubusercontent.com/u/38494130?v=4", + "description": null, + "topics": [] }, { - "uid": "github/greendw/AntabGMVA", - "url": "https://github.com/greendw/AntabGMVA", - "rel": "/software/repository/github/greendw/AntabGMVA", - "avatar": "https://avatars.githubusercontent.com/u/93199958?v=4", - "description": "A Python tool for managing GMVA metadata", - "topics": [] + "uid": "github/benallard/galileo", + "url": "https://github.com/benallard/galileo", + "rel": "/software/repository/github/benallard/galileo", + "avatar": "https://avatars.githubusercontent.com/u/178188?v=4", + "description": "Utility to securely synchronize a Fitbit device with the Fitbit web service", + "topics": [ + "python", + "fitbit", + "synchronization" + ] }, { "uid": "github/carnival-data/carnival", @@ -23106,10391 +21625,10590 @@ ] }, { - "uid": "github/zavolanlab/PAQR2", - "url": "https://github.com/zavolanlab/PAQR2", - "rel": "/software/repository/github/zavolanlab/PAQR2", - "avatar": "https://avatars.githubusercontent.com/u/25588245?v=4", - "description": "Updated version of PAQR, which was previously available in the PAQR_KAPAC joint repository.", - "topics": [ - "bioinformatics", - "snakemake", - "rna-seq-pipeline", - "polyadenylation" - ] - }, - { - "uid": "github/mrempel/geohexviz", - "url": "https://github.com/mrempel/geohexviz", - "rel": "/software/repository/github/mrempel/geohexviz", - "avatar": "https://avatars.githubusercontent.com/u/7723447?v=4", - "description": "GeoHexViz - generating publication-quality geospatical visualization of hexagonally binned data", - "topics": [] - }, - { - "uid": "github/flaminiafortuni/FORECAST", - "url": "https://github.com/flaminiafortuni/FORECAST", - "rel": "/software/repository/github/flaminiafortuni/FORECAST", - "avatar": "https://avatars.githubusercontent.com/u/55835937?v=4", - "description": null, + "uid": "github/HCGB-IGTP/spaTyper", + "url": "https://github.com/HCGB-IGTP/spaTyper", + "rel": "/software/repository/github/HCGB-IGTP/spaTyper", + "avatar": "https://avatars.githubusercontent.com/u/56880433?v=4", + "description": "Computational method for finding spa types.", "topics": [] }, { - "uid": "github/CQCL/qujax", - "url": "https://github.com/CQCL/qujax", - "rel": "/software/repository/github/CQCL/qujax", - "avatar": "https://avatars.githubusercontent.com/u/15688781?v=4", - "description": "Simulating quantum circuits with JAX", + "uid": "github/HCGB-IGTP/XICRA", + "url": "https://github.com/HCGB-IGTP/XICRA", + "rel": "/software/repository/github/HCGB-IGTP/XICRA", + "avatar": "https://avatars.githubusercontent.com/u/56880433?v=4", + "description": "Small RNAseq pipeline for paired-end reads", "topics": [ - "jax", - "python", - "quantum" + "pipeline", + "mirna", + "smallrna-seq", + "python" ] }, { - "uid": "github/stevenweaver/seqcomplexity", - "url": "https://github.com/stevenweaver/seqcomplexity", - "rel": "/software/repository/github/stevenweaver/seqcomplexity", - "avatar": "https://avatars.githubusercontent.com/u/535261?v=4", - "description": "Rust package that calculates sequence complexity from FastQ file", - "topics": [] - }, - { - "uid": "github/MDU-PHL/emmtyper", - "url": "https://github.com/MDU-PHL/emmtyper", - "rel": "/software/repository/github/MDU-PHL/emmtyper", - "avatar": "https://avatars.githubusercontent.com/u/11035838?v=4", - "description": "emm Automatic Isolate Labeller", + "uid": "github/delphes/delphes", + "url": "https://github.com/delphes/delphes", + "rel": "/software/repository/github/delphes/delphes", + "avatar": "https://avatars.githubusercontent.com/u/8037711?v=4", + "description": "A framework for fast simulation of a generic collider experiment", "topics": [ - "bioinformatics", - "streptococcus-pyogenes", - "emm-typing", - "genotyping", - "genome-annotation" + "physics-simulation", + "delphes", + "detector-simulation", + "hep" ] }, { - "uid": "github/MDU-PHL/abritamr", - "url": "https://github.com/MDU-PHL/abritamr", - "rel": "/software/repository/github/MDU-PHL/abritamr", - "avatar": "https://avatars.githubusercontent.com/u/11035838?v=4", - "description": "A pipeline for running AMRfinderPlus and collating results into functional classes", - "topics": [] + "uid": "github/JohannesBuchner/PyMultiNest", + "url": "https://github.com/JohannesBuchner/PyMultiNest", + "rel": "/software/repository/github/JohannesBuchner/PyMultiNest", + "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", + "description": "Pythonic Bayesian inference and visualization for the MultiNest Nested Sampling Algorithm and PyCuba's cubature algorithms.", + "topics": [ + "nested-sampling", + "python", + "monte-carlo" + ] }, { - "uid": "github/aewallin/allantools", - "url": "https://github.com/aewallin/allantools", - "rel": "/software/repository/github/aewallin/allantools", - "avatar": "https://avatars.githubusercontent.com/u/909509?v=4", - "description": "Allan deviation and related time & frequency statistics library in Python", - "topics": [] + "uid": "github/JohannesBuchner/nway", + "url": "https://github.com/JohannesBuchner/nway", + "rel": "/software/repository/github/JohannesBuchner/nway", + "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", + "description": "nway -- Bayesian cross-matching of astronomical catalogues", + "topics": [ + "astronomy", + "catalogue", + "association", + "bayesian-inference", + "python" + ] }, { - "uid": "github/mentatpsi/OSGenome", - "url": "https://github.com/mentatpsi/OSGenome", - "rel": "/software/repository/github/mentatpsi/OSGenome", - "avatar": "https://avatars.githubusercontent.com/u/1183961?v=4", - "description": "An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies", + "uid": "github/JohannesBuchner/BXA", + "url": "https://github.com/JohannesBuchner/BXA", + "rel": "/software/repository/github/JohannesBuchner/BXA", + "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", + "description": "Bayesian X-ray analysis (nested sampling for Xspec and Sherpa)", "topics": [ - "23andme", - "snps", - "genome", - "data-crawling", + "nested-sampling", "python", - "genetic-data", - "kendo", - "flask", - "genetics", - "snpedia", - "raw-data" + "x-ray-astronomy", + "spectroscopy", + "xspec", + "sherpa", + "model-selection" ] }, { - "uid": "github/redcap-tools/PyCap", - "url": "https://github.com/redcap-tools/PyCap", - "rel": "/software/repository/github/redcap-tools/PyCap", - "avatar": "https://avatars.githubusercontent.com/u/14996753?v=4", - "description": "REDCap in Python", + "uid": "github/JohannesBuchner/UltraNest", + "url": "https://github.com/JohannesBuchner/UltraNest", + "rel": "/software/repository/github/JohannesBuchner/UltraNest", + "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", + "description": "Fit and compare complex models reliably and rapidly. Advanced nested sampling.", "topics": [ - "redcap", + "nested-sampling", "python", - "redcap-api", - "redcap-package" + "model-selection", + "parallel-computing", + "monte-carlo" ] }, { - "uid": "github/meixichen/SpatialGEV", - "url": "https://github.com/meixichen/SpatialGEV", - "rel": "/software/repository/github/meixichen/SpatialGEV", - "avatar": "https://avatars.githubusercontent.com/u/65635345?v=4", - "description": "An efficient computational method for fitting spatial extreme value models", + "uid": "github/agnetelundgaard/BALDR", + "url": "https://github.com/agnetelundgaard/BALDR", + "rel": "/software/repository/github/agnetelundgaard/BALDR", + "avatar": "https://avatars.githubusercontent.com/u/42959833?v=4", + "description": null, "topics": [] }, { - "uid": "github/lucydot/effmass", - "url": "https://github.com/lucydot/effmass", - "rel": "/software/repository/github/lucydot/effmass", - "avatar": "https://avatars.githubusercontent.com/u/2452935?v=4", - "description": "Calculates various definitions of effective mass from the electronic bandstructure of a semiconductor.", + "uid": "github/tyo-nu/pickaxe_paper", + "url": "https://github.com/tyo-nu/pickaxe_paper", + "rel": "/software/repository/github/tyo-nu/pickaxe_paper", + "avatar": "https://avatars.githubusercontent.com/u/25189699?v=4", + "description": null, "topics": [] }, { - "uid": "github/nekStab/LightKrylov", - "url": "https://github.com/nekStab/LightKrylov", - "rel": "/software/repository/github/nekStab/LightKrylov", - "avatar": "https://avatars.githubusercontent.com/u/97961581?v=4", - "description": "Lightweight implementation of Krylov subspace techniques in Fortran.", - "topics": [] + "uid": "github/tyo-nu/MINE-app", + "url": "https://github.com/tyo-nu/MINE-app", + "rel": "/software/repository/github/tyo-nu/MINE-app", + "avatar": "https://avatars.githubusercontent.com/u/25189699?v=4", + "description": "Web application for the MINE databases", + "topics": [ + "cheminformatics", + "metabolomics" + ] }, { - "uid": "github/Rhyd-Lewis/GCol", - "url": "https://github.com/Rhyd-Lewis/GCol", - "rel": "/software/repository/github/Rhyd-Lewis/GCol", - "avatar": "https://avatars.githubusercontent.com/u/163303122?v=4", - "description": "A Python library for graph coloring", + "uid": "github/mirochaj/sedop", + "url": "https://github.com/mirochaj/sedop", + "rel": "/software/repository/github/mirochaj/sedop", + "avatar": "https://avatars.githubusercontent.com/u/3018135?v=4", + "description": "Code for optimizing discrete versions of common SEDs.", "topics": [] }, { - "uid": "github/dmilakovic/QSOSIM10", - "url": "https://github.com/dmilakovic/QSOSIM10", - "rel": "/software/repository/github/dmilakovic/QSOSIM10", - "avatar": "https://avatars.githubusercontent.com/u/8346157?v=4", - "description": "Fortran code to generate artificial QSO spectra", - "topics": [] + "uid": "github/mirochaj/ares", + "url": "https://github.com/mirochaj/ares", + "rel": "/software/repository/github/mirochaj/ares", + "avatar": "https://avatars.githubusercontent.com/u/3018135?v=4", + "description": "Accelerated Reionization Era Simulations", + "topics": [ + "21-cm-cosmology", + "galaxy-formation", + "reionization", + "cosmic-dawn", + "intensity-mapping" + ] }, { - "uid": "github/JASHunt/Snapdragons", - "url": "https://github.com/JASHunt/Snapdragons", - "rel": "/software/repository/github/JASHunt/Snapdragons", - "avatar": "https://avatars.githubusercontent.com/u/17595585?v=4", - "description": "Snapdragons population synthesis & mock survey data generation code ", + "uid": "github/morispi/LRez", + "url": "https://github.com/morispi/LRez", + "rel": "/software/repository/github/morispi/LRez", + "avatar": "https://avatars.githubusercontent.com/u/26629273?v=4", + "description": "Standalone tool and library allowing to work with barcoded linked-reads", + "topics": [ + "barcode", + "barcodes", + "linked-reads", + "linked", + "reads", + "10x", + "10xgenomics", + "10x-genomics", + "index", + "haplotagging", + "tell-seq", + "stlfr", + "bioinformatics" + ] + }, + { + "uid": "github/vhaasteren/piccard", + "url": "https://github.com/vhaasteren/piccard", + "rel": "/software/repository/github/vhaasteren/piccard", + "avatar": "https://avatars.githubusercontent.com/u/3092444?v=4", + "description": "Piccard: pulsar timing data analysis package", "topics": [] }, { - "uid": "github/sncosmo/sncosmo", - "url": "https://github.com/sncosmo/sncosmo", - "rel": "/software/repository/github/sncosmo/sncosmo", - "avatar": "https://avatars.githubusercontent.com/u/5490746?v=4", - "description": "Python library for supernova cosmology", + "uid": "github/lmfit/lmfit-py", + "url": "https://github.com/lmfit/lmfit-py", + "rel": "/software/repository/github/lmfit/lmfit-py", + "avatar": "https://avatars.githubusercontent.com/u/6190878?v=4", + "description": "Non-Linear Least Squares Minimization, with flexible Parameter settings, based on scipy.optimize, and with many additional classes and methods for curve fitting. ", "topics": [ "python", - "supernovae", - "cosmology", - "astronomy", - "astrophysics" + "scipy", + "curve-fitting", + "least-squares" ] }, { - "uid": "github/demorest/nanopipe", - "url": "https://github.com/demorest/nanopipe", - "rel": "/software/repository/github/demorest/nanopipe", - "avatar": "https://avatars.githubusercontent.com/u/159985?v=4", - "description": "Calibration and TOA generation scripts for NANOGrav data", + "uid": "github/younglab/origami", + "url": "https://github.com/younglab/origami", + "rel": "/software/repository/github/younglab/origami", + "avatar": "https://avatars.githubusercontent.com/u/15201790?v=4", + "description": "Statistical Modeling of ChIA-PET interactions", + "topics": [ + "chia-pet", + "chromatin", + "chromatin-interaction" + ] + }, + { + "uid": "github/csmsoftware/IMPaCTS", + "url": "https://github.com/csmsoftware/IMPaCTS", + "rel": "/software/repository/github/csmsoftware/IMPaCTS", + "avatar": "https://avatars.githubusercontent.com/u/8554835?v=4", + "description": "Imperial Metabolic Profiling and Chemometrics Toolbox for Spectroscopy", "topics": [] }, { - "uid": "github/adriancorrendo/metrica", - "url": "https://github.com/adriancorrendo/metrica", - "rel": "/software/repository/github/adriancorrendo/metrica", - "avatar": "https://avatars.githubusercontent.com/u/46946511?v=4", - "description": "Prediction Performance Metrics", + "uid": "github/DiseaseTranscriptomicsLab/scStudio", + "url": "https://github.com/DiseaseTranscriptomicsLab/scStudio", + "rel": "/software/repository/github/DiseaseTranscriptomicsLab/scStudio", + "avatar": "https://avatars.githubusercontent.com/u/125599003?v=4", + "description": "A User-Friendly Web Application for Intuitive and Comprehensive scRNA-seq Data Analysis ", "topics": [] }, { - "uid": "github/xastprl/darsakx", - "url": "https://github.com/xastprl/DarsakX", - "rel": "/software/repository/github/xastprl/darsakx", - "avatar": "https://avatars.githubusercontent.com/u/102579066?v=4", - "description": "DarsakX is a Python package that can be used to design and analyze the imaging performance of a multi-shell X-ray telescope with an optical configuration similar to Wolter-1 optics for astronomical purposes. ", + "uid": "github/D-Crake/HEADSS", + "url": "https://github.com/D-Crake/HEADSS", + "rel": "/software/repository/github/D-Crake/HEADSS", + "avatar": "https://avatars.githubusercontent.com/u/84581147?v=4", + "description": "HiErArchical Data Splitting and Stitching Software for Non-Distributed Clustering Algorithms", "topics": [] }, { - "uid": "github/toros-astro/corral", - "url": "https://github.com/toros-astro/corral", - "rel": "/software/repository/github/toros-astro/corral", - "avatar": "https://avatars.githubusercontent.com/u/11877437?v=4", - "description": "The Powerful Pipeline Framework", + "uid": "github/cblearn/cblearn", + "url": "https://github.com/cblearn/cblearn", + "rel": "/software/repository/github/cblearn/cblearn", + "avatar": "https://avatars.githubusercontent.com/u/132082914?v=4", + "description": "Comparison-based Machine Learning in Python", "topics": [ - "python", - "python3", - "framework", - "pipeline", - "astronomy", - "database", - "data-science", - "oop" + "ordinal", + "embedding", + "machine-learning", + "machinelearning", + "scikit-learn", + "non-metric", + "scaling", + "multidimensional-scaling", + "multidimensional" ] }, { - "uid": "github/toros-astro/astroalign-legacy", - "url": "https://github.com/toros-astro/astroalign-legacy", - "rel": "/software/repository/github/toros-astro/astroalign-legacy", - "avatar": "https://avatars.githubusercontent.com/u/11877437?v=4", - "description": "A tool to align astronomical images based on asterism matching", + "uid": "github/tpospisi/cdetools", + "url": "https://github.com/tpospisi/cdetools", + "rel": "/software/repository/github/tpospisi/cdetools", + "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", + "description": "Tools for Conditional Density Estimates", "topics": [] }, { - "uid": "github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", - "url": "https://github.com/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", - "rel": "/software/repository/github/Wang-Ruihui/A-live-homogeneous-database-of-solar-active-regions", - "avatar": "https://avatars.githubusercontent.com/u/110174507?v=4", - "description": "This is a live homogeneous database of solar active regions (ARs). It's produced by an automatic detection method of AR.", - "topics": [ - "image-processing", - "detection-of-solar-active-regions", - "solar-active-region-database" - ] + "uid": "github/tpospisi/nnkcde", + "url": "https://github.com/tpospisi/NNKCDE", + "rel": "/software/repository/github/tpospisi/nnkcde", + "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", + "description": "Nearest Neighbor Kernel Conditional Density Estimation", + "topics": [] }, { - "uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", - "url": "https://github.com/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", - "rel": "/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", - "avatar": "https://avatars.githubusercontent.com/u/45032287?v=4", - "description": "This project contains the R scripts needed to replicate the results for the conference paper: Modelling the effect of courses over soft skills: A simulation study, presented at AERA 2023 Chicago by Pinos Ullauri L.A., Fleury A., Van den Noortgate W., Lebis A., Vermeulen M., Karami A.", + "uid": "github/tpospisi/RFCDE", + "url": "https://github.com/tpospisi/RFCDE", + "rel": "/software/repository/github/tpospisi/RFCDE", + "avatar": "https://avatars.githubusercontent.com/u/8901856?v=4", + "description": "Random Forests for Conditional Density Estimation", "topics": [] }, { - "uid": "github/bluesky/bluesky", - "url": "https://github.com/bluesky/bluesky", - "rel": "/software/repository/github/bluesky/bluesky", - "avatar": "https://avatars1.githubusercontent.com/u/47676189?v=4", - "description": "experiment orchestration and data acquisition", + "uid": "github/sczesla/PyAstronomy", + "url": "https://github.com/sczesla/PyAstronomy", + "rel": "/software/repository/github/sczesla/PyAstronomy", + "avatar": "https://avatars.githubusercontent.com/u/330769?v=4", + "description": "A collection of astronomy-related routines in Python", "topics": [ "python", - "bluesky", - "dataacquisition" + "astronomy", + "data-analysis" ] }, { - "uid": "github/sgshulman/DGEM", - "url": "https://github.com/sgshulman/DGEM", - "rel": "/software/repository/github/sgshulman/DGEM", - "avatar": "https://avatars.githubusercontent.com/u/25725978?v=4", - "description": "A simple three-dimensional dust continuum radiative transfer code for method comparison", - "topics": [] + "uid": "github/datalad/datalad", + "url": "https://github.com/datalad/datalad", + "rel": "/software/repository/github/datalad/datalad", + "avatar": "https://avatars.githubusercontent.com/u/8927200?v=4", + "description": "Keep code, data, containers under control with git and git-annex", + "topics": [ + "python", + "git-annex", + "data-storage", + "dataset", + "usable" + ] }, { - "uid": "github/AnantharamanLab/vRhyme", - "url": "https://github.com/AnantharamanLab/vRhyme", - "rel": "/software/repository/github/AnantharamanLab/vRhyme", - "avatar": "https://avatars.githubusercontent.com/u/47664496?v=4", - "description": "Binning Virus Genomes from Metagenomes", + "uid": "github/CAMI-challenge/AMBER", + "url": "https://github.com/CAMI-challenge/AMBER", + "rel": "/software/repository/github/CAMI-challenge/AMBER", + "avatar": "https://avatars.githubusercontent.com/u/8009060?v=4", + "description": "AMBER: Assessment of Metagenome BinnERs", + "topics": [ + "binning", + "metagenomics", + "benchmarking", + "biobox" + ] + }, + { + "uid": "github/CAMI-challenge/CAMITAX", + "url": "https://github.com/CAMI-challenge/CAMITAX", + "rel": "/software/repository/github/CAMI-challenge/CAMITAX", + "avatar": "https://avatars.githubusercontent.com/u/8009060?v=4", + "description": "CAMITAX: Taxon labels for microbial genomes", "topics": [] }, { - "uid": "github/acerbilab/pybads", - "url": "https://github.com/acerbilab/pybads", - "rel": "/software/repository/github/acerbilab/pybads", - "avatar": "https://avatars.githubusercontent.com/u/99487879?v=4", - "description": "PyBADS: Bayesian Adaptive Direct Search optimization algorithm for model fitting in Python", + "uid": "github/MLMI2-CSSI/foundry", + "url": "https://github.com/MLMI2-CSSI/foundry", + "rel": "/software/repository/github/MLMI2-CSSI/foundry", + "avatar": "https://avatars.githubusercontent.com/u/60273950?v=4", + "description": "Simplifying the discovery and usage of machine-learning ready datasets in materials science and chemistry", "topics": [ - "bayesian-optimization", - "log-likelihood", - "noiseless-functions", - "noisy-functions", - "optimization-algorithms", - "python" + "data-science", + "machine-learning", + "materials-science", + "datasets", + "chemistry" ] }, { - "uid": "github/galtay/urchin", - "url": "https://github.com/galtay/urchin", - "rel": "/software/repository/github/galtay/urchin", - "avatar": "https://avatars.githubusercontent.com/u/663051?v=4", - "description": "Repository for archival storage of Urchin code.", + "uid": "github/ImperialCollegeLondon/fractalgenetics", + "url": "https://github.com/ImperialCollegeLondon/fractalgenetics", + "rel": "/software/repository/github/ImperialCollegeLondon/fractalgenetics", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Analysis of the genomic architecture and functional role of myocardial trabeculae", "topics": [] }, { - "uid": "github/galtay/sphray", - "url": "https://github.com/galtay/sphray", - "rel": "/software/repository/github/galtay/sphray", - "avatar": "https://avatars.githubusercontent.com/u/663051?v=4", - "description": " THIS CODE IS HERE FOR ARCHIVAL PURPOSES AND IS NOT MAINTAINED", + "uid": "github/ImperialCollegeLondon/magda_tools", + "url": "https://github.com/ImperialCollegeLondon/magda_tools", + "rel": "/software/repository/github/ImperialCollegeLondon/magda_tools", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "A collection of tools for working with MAGDA data files", "topics": [] }, { - "uid": "github/davidgardenier/frbcat", - "url": "https://github.com/davidgardenier/frbcat", - "rel": "/software/repository/github/davidgardenier/frbcat", - "avatar": "https://avatars.githubusercontent.com/u/14091346?v=4", - "description": "Query Fast Radio Burst catalogues", + "uid": "github/ImperialCollegeLondon/hcga", + "url": "https://github.com/barahona-research-group/hcga", + "rel": "/software/repository/github/ImperialCollegeLondon/hcga", + "avatar": "https://avatars.githubusercontent.com/u/51328597?v=4", + "description": "Highly Comparative Graph Analysis - Code for network phenotyping ", "topics": [ - "frbs" + "networks", + "feature-extraction", + "classification-algorithm", + "graph-features", + "interpretable-features", + "graph-analysis-toolbox", + "graph-embedding" ] }, { - "uid": "github/davidgardenier/frbpoppy", - "url": "https://github.com/davidgardenier/frbpoppy", - "rel": "/software/repository/github/davidgardenier/frbpoppy", - "avatar": "https://avatars.githubusercontent.com/u/14091346?v=4", - "description": "Fast Radio Burst Population Synthesis in Python", + "uid": "github/ImperialCollegeLondon/champ", + "url": "https://github.com/ImperialCollegeLondon/champ", + "rel": "/software/repository/github/ImperialCollegeLondon/champ", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/ImperialCollegeLondon/rcs-pacemakers", + "url": "https://github.com/ImperialCollegeLondon/rcs-pacemakers", + "rel": "/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Example of GPU-accelerated machine learning on the RCS compute cluster using Jupyter and conda", "topics": [ - "astronomy", - "population-synthesis", - "frb", - "frbs", - "fast-radio-bursts" + "jupyter", + "pytorch", + "computer-vision", + "machine-learning", + "python" ] }, { - "uid": "github/nichollsh/AGNI", - "url": "https://github.com/nichollsh/AGNI", - "rel": "/software/repository/github/nichollsh/AGNI", - "avatar": "https://avatars.githubusercontent.com/u/32022679?v=4", - "description": "A 1D radiative-convective model for the atmospheres of hot (rocky) planets.", + "uid": "github/ImperialCollegeLondon/covid19model", + "url": "https://github.com/ImperialCollegeLondon/covid19model", + "rel": "/software/repository/github/ImperialCollegeLondon/covid19model", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Code for modelling estimated deaths and cases for COVID19. ", "topics": [ - "atmosphere-model", - "convection", - "exoplanets", - "physics", - "radiation", - "fortran", - "julia", - "planetary-science", - "radiative-transfer", - "nonlinear-optimization", - "optimization", - "thermodynamics", - "atmosphere", - "jwst", - "magma" + "covid-19", + "bayesian-statistics", + "renewal-process", + "branching-process", + "intervention-study", + "probabilistic-models", + "statistical-models", + "statistical-inference", + "statistical-computing" ] }, { - "uid": "github/cole-trapnell-lab/cufflinks", - "url": "https://github.com/cole-trapnell-lab/cufflinks", - "rel": "/software/repository/github/cole-trapnell-lab/cufflinks", - "avatar": "https://avatars.githubusercontent.com/u/8060918?v=4", - "description": "a reference-guided assembler that assembles transcripts, estimates their abundances, and tests for differential expression and regulation in RNA-Seq samples.", + "uid": "github/ImperialCollegeLondon/ICLOCS", + "url": "https://github.com/ImperialCollegeLondon/ICLOCS", + "rel": "/software/repository/github/ImperialCollegeLondon/ICLOCS", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Imperial College London Optimal Control Software (ICLOCS)", "topics": [] }, { - "uid": "github/cole-trapnell-lab/monocle3", - "url": "https://github.com/cole-trapnell-lab/monocle3", - "rel": "/software/repository/github/cole-trapnell-lab/monocle3", - "avatar": "https://avatars.githubusercontent.com/u/8060918?v=4", - "description": "An analysis toolkit for single-cell RNA-seq.", + "uid": "github/ImperialCollegeLondon/sharpy", + "url": "https://github.com/ImperialCollegeLondon/sharpy", + "rel": "/software/repository/github/ImperialCollegeLondon/sharpy", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Simulation of High Aspect Ratio aeroplanes and wind turbines in Python: a nonlinear aeroelastic code", "topics": [ - "single-cell-rna-seq" + "aeroelasticity", + "simulation", + "aeronautics", + "structures", + "structural-dynamics", + "wind-turbines" ] }, { - "uid": "github/ebi-jdispatcher/taxonomy-resolver", - "url": "https://github.com/ebi-jdispatcher/taxonomy-resolver", - "rel": "/software/repository/github/ebi-jdispatcher/taxonomy-resolver", - "avatar": "https://avatars.githubusercontent.com/u/105044835?v=4", - "description": "Builds lists of Taxonomy Identifiers based on the NCBI Taxonomy Database", + "uid": "github/ImperialCollegeLondon/SWMManywhere", + "url": "https://github.com/ImperialCollegeLondon/SWMManywhere", + "rel": "/software/repository/github/ImperialCollegeLondon/SWMManywhere", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "SWMManywhere is used to derive and simulate a sewer network anywhere in the world", "topics": [ - "bioinformatics", - "bioinformatics-tool", - "taxonomy" + "hacktoberfest", + "hydrology-stormwater-analysis", + "python", + "stormwater", + "swmm", + "swmm5", + "hydraulic-modelling", + "swmmanywhere" ] }, { - "uid": "github/rambaut/jebl2", - "url": "https://github.com/rambaut/jebl2", - "rel": "/software/repository/github/rambaut/jebl2", - "avatar": "https://avatars.githubusercontent.com/u/686405?v=4", - "description": "Automatically exported from code.google.com/p/jebl2", + "uid": "github/ImperialCollegeLondon/safedata", + "url": "https://github.com/ImperialCollegeLondon/safedata", + "rel": "/software/repository/github/ImperialCollegeLondon/safedata", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "An R package for discovering and using data from the SAFE Project", "topics": [] }, { - "uid": "github/katholt/Kleborate", - "url": "https://github.com/katholt/Kleborate", - "rel": "/software/repository/github/katholt/Kleborate", - "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", - "description": "tool to screen Klebsiella genome assemblies", + "uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", + "url": "https://github.com/ImperialCollegeLondon/rcs_cluster_scripts", + "rel": "/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "A collection of handy scripts for use with the Imperial College Research Computing Service cluster", "topics": [] }, { - "uid": "github/katholt/Kaptive", - "url": "https://github.com/katholt/Kaptive", - "rel": "/software/repository/github/katholt/Kaptive", - "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", - "description": "obtain information about K and O types for Klebsiella genome assemblies", + "uid": "github/ImperialCollegeLondon/WInc3D", + "url": "https://github.com/ImperialCollegeLondon/WInc3D", + "rel": "/software/repository/github/ImperialCollegeLondon/WInc3D", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Wind Farm Simulator", "topics": [] }, { - "uid": "github/katholt/srst2", - "url": "https://github.com/katholt/srst2", - "rel": "/software/repository/github/katholt/srst2", - "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", - "description": "Short Read Sequence Typing for Bacterial Pathogens", + "uid": "github/ImperialCollegeLondon/UVLM", + "url": "https://github.com/ImperialCollegeLondon/UVLM", + "rel": "/software/repository/github/ImperialCollegeLondon/UVLM", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Unsteady Vortex Lattice Method for Aeroelasticity in C++", "topics": [] }, { - "uid": "github/erikhom/aida", - "url": "https://github.com/erikhom/aida", - "rel": "/software/repository/github/erikhom/aida", - "avatar": "https://avatars.githubusercontent.com/u/4625918?v=4", - "description": "Code for the Adaptive Image Deconvolution Algorithm (AIDA) of Hom et al. (2007) J. Opt. Soc. Amer. A", + "uid": "github/ImperialCollegeLondon/pytest_template_application", + "url": "https://github.com/ImperialCollegeLondon/pytest_template_application", + "rel": "/software/repository/github/ImperialCollegeLondon/pytest_template_application", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Python application template with automated QA and Docker image publishing", "topics": [] }, { - "uid": "github/jdcphysics/validation", - "url": "https://github.com/jdcphysics/validation", - "rel": "/software/repository/github/jdcphysics/validation", - "avatar": "https://avatars.githubusercontent.com/u/16171392?v=4", - "description": "codes to compare simulation data to various observations", + "uid": "github/ImperialCollegeLondon/sap-voicebox", + "url": "https://github.com/ImperialCollegeLondon/sap-voicebox", + "rel": "/software/repository/github/ImperialCollegeLondon/sap-voicebox", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Speech Processing Toolbox for MATLAB", "topics": [] }, { - "uid": "github/alexdaniel654/qlayers", - "url": "https://github.com/alexdaniel654/qlayers", - "rel": "/software/repository/github/alexdaniel654/qlayers", - "avatar": "https://avatars.githubusercontent.com/u/23356429?v=4", - "description": "Quantitative layer based analysis for renal magnetic resonance imaging.", + "uid": "github/ImperialCollegeLondon/EpiCollectplus", + "url": "https://github.com/ImperialCollegeLondon/EpiCollectplus", + "rel": "/software/repository/github/ImperialCollegeLondon/EpiCollectplus", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "The next generation of EpiCollect, multiple forms, more fields and more control. We recommend using Apache 2.2 or later, PHP 5.3 or later and MySQL 5.5 or later.", + "topics": [] + }, + { + "uid": "github/ImperialCollegeLondon/django-drf-filepond", + "url": "https://github.com/ImperialCollegeLondon/django-drf-filepond", + "rel": "/software/repository/github/ImperialCollegeLondon/django-drf-filepond", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "A Django app providing a server implemention for the Filepond file upload library", "topics": [ - "image-analysis", - "kidney-disease", - "medical-imaging", - "mri" + "file-upload", + "filepond", + "django-application" ] }, { - "uid": "github/CEA-MetroCarac/pystack3d", - "url": "https://github.com/CEA-MetroCarac/pystack3d", - "rel": "/software/repository/github/CEA-MetroCarac/pystack3d", - "avatar": "https://avatars.githubusercontent.com/u/111420199?v=4", - "description": "Package to process images stacks (typically from 3D FIB-SEM)", + "uid": "github/ImperialCollegeLondon/PyProBE", + "url": "https://github.com/ImperialCollegeLondon/PyProBE", + "rel": "/software/repository/github/ImperialCollegeLondon/PyProBE", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Python Processing for Battery Experiments", "topics": [] }, { - "uid": "github/CEA-MetroCarac/fitspy", - "url": "https://github.com/CEA-MetroCarac/fitspy", - "rel": "/software/repository/github/CEA-MetroCarac/fitspy", - "avatar": "https://avatars.githubusercontent.com/u/111420199?v=4", - "description": "Generic tool dedicated to fit spectra in python ", - "topics": [ - "decomposition", - "fitting", - "gaussian", - "lmfit", - "lorentzian", - "map", - "python", - "spectral-analysis", - "spectrum" - ] + "uid": "github/ImperialCollegeLondon/research-software-directory-data", + "url": "https://github.com/ImperialCollegeLondon/research-software-directory", + "rel": "/software/repository/github/ImperialCollegeLondon/research-software-directory-data", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Imperial College Research Software Directory", + "topics": [] }, { - "uid": "github/Markusjsommer/BalrogCPP", - "url": "https://github.com/Markusjsommer/BalrogCPP", - "rel": "/software/repository/github/Markusjsommer/BalrogCPP", - "avatar": "https://avatars.githubusercontent.com/u/16809312?v=4", - "description": "A universal protein model for prokaryotic gene prediction", + "uid": "github/ImperialCollegeLondon/adam", + "url": "https://github.com/ImperialCollegeLondon/adam", + "rel": "/software/repository/github/ImperialCollegeLondon/adam", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": null, "topics": [] }, { - "uid": "github/Taywee/args", - "url": "https://github.com/Taywee/args", - "rel": "/software/repository/github/Taywee/args", - "avatar": "https://avatars.githubusercontent.com/u/1069915?v=4", - "description": " A simple header-only C++ argument parser library. Supposed to be flexible and powerful, and attempts to be compatible with the functionality of the Python standard argparse library (though not necessarily the API).", + "uid": "github/ImperialCollegeLondon/R2T2", + "url": "https://github.com/ImperialCollegeLondon/R2T2", + "rel": "/software/repository/github/ImperialCollegeLondon/R2T2", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "Research References Tracking Tool", "topics": [] }, { - "uid": "github/AngryMaciek/hypercomplex", - "url": "https://github.com/AngryMaciek/hypercomplex", - "rel": "/software/repository/github/AngryMaciek/hypercomplex", - "avatar": "https://avatars.githubusercontent.com/u/19755308?v=4", - "description": "Abstract & fast header-only C++ template library for lattice-based cryptosystems in high-dimensional algebras", - "topics": [ - "algebra", - "mathematics", - "precision", - "cryptography", - "post-quantum-cryptography" - ] + "uid": "github/ImperialCollegeLondon/epidemia", + "url": "https://github.com/ImperialCollegeLondon/epidemia", + "rel": "/software/repository/github/ImperialCollegeLondon/epidemia", + "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", + "description": "epidemia package", + "topics": [] }, { - "uid": "github/MouseLand/cellpose", - "url": "https://github.com/MouseLand/cellpose", - "rel": "/software/repository/github/MouseLand/cellpose", - "avatar": "https://avatars.githubusercontent.com/u/28845184?v=4", - "description": "a generalist algorithm for cellular segmentation with human-in-the-loop capabilities", - "topics": [ - "segmentation", - "cell-segmentation", - "cell-biology" - ] + "uid": "github/C2SM-RCM/emiproc", + "url": "https://github.com/C2SM-RCM/emiproc", + "rel": "/software/repository/github/C2SM-RCM/emiproc", + "avatar": "https://avatars.githubusercontent.com/u/13691276?v=4", + "description": "Preprocessing of emissions: from any inventory to any model", + "topics": [] }, { - "uid": "github/cwieder/py-ssPA", - "url": "https://github.com/cwieder/py-ssPA", - "rel": "/software/repository/github/cwieder/py-ssPA", - "avatar": "https://avatars.githubusercontent.com/u/59842155?v=4", - "description": "Single sample pathway analysis tools for omics data", - "topics": [ - "bioinformatics", - "identifier-mapping", - "pathway-analysis", - "pathway-enrichment-analysis", - "pathway-databases", - "metabolomics", - "omics" - ] + "uid": "github/antwiser/ChemFH", + "url": "https://github.com/antwiser/ChemFH", + "rel": "/software/repository/github/antwiser/ChemFH", + "avatar": "https://avatars.githubusercontent.com/u/86821301?v=4", + "description": "Utilizing high-quality database and Directed Message Passing Neural Network (DMPNN) architectures, ChemFH enhances the efficiency of drug R&D by achieving reliable detection of frequent hitters in colloidal aggregate, firefly luciferase reporter enzyme inhibition, fluorescence, chemical reactivity, and promiscuity.", + "topics": [] }, { - "uid": "github/snakesonabrain/groundhog", - "url": "https://github.com/snakesonabrain/groundhog", - "rel": "/software/repository/github/snakesonabrain/groundhog", - "avatar": "https://avatars.githubusercontent.com/u/26286969?v=4", - "description": "Groundhog, a general-purpose geotechnical library", + "uid": "github/rhayes777/PyAutoFit", + "url": "https://github.com/rhayes777/PyAutoFit", + "rel": "/software/repository/github/rhayes777/PyAutoFit", + "avatar": "https://avatars.githubusercontent.com/u/6361906?v=4", + "description": null, "topics": [] }, { - "uid": "github/glass-dev/glass", - "url": "https://github.com/glass-dev/glass", - "rel": "/software/repository/github/glass-dev/glass", - "avatar": "https://avatars.githubusercontent.com/u/88461024?v=4", - "description": "Generator for Large Scale Structure", + "uid": "github/yiwenstat/MCPCA_PopGen", + "url": "https://github.com/yiwenstat/MCPCA_PopGen", + "rel": "/software/repository/github/yiwenstat/MCPCA_PopGen", + "avatar": "https://avatars.githubusercontent.com/u/44883065?v=4", + "description": null, "topics": [] }, { - "uid": "github/aliojjati/MGCAMB", - "url": "https://github.com/aliojjati/MGCAMB", - "rel": "/software/repository/github/aliojjati/MGCAMB", - "avatar": "https://avatars.githubusercontent.com/u/11789226?v=4", - "description": "Repo for MGCAMB", + "uid": "github/astromb/PICsar2D", + "url": "https://github.com/astromb/PICsar2D", + "rel": "/software/repository/github/astromb/PICsar2D", + "avatar": "https://avatars.githubusercontent.com/u/8334286?v=4", + "description": "Particle In Cell pulSAR code", + "topics": [] + }, + { + "uid": "github/wal-yan/target-methylseq-qc", + "url": "https://github.com/wal-yan/target-methylseq-qc", + "rel": "/software/repository/github/wal-yan/target-methylseq-qc", + "avatar": "https://avatars.githubusercontent.com/u/132333411?v=4", + "description": "A lightweight pipeline for collecting Picard metrics from targeted sequence mapping files.", + "topics": [] + }, + { + "uid": "github/mlafarga/raccoon", + "url": "https://github.com/mlafarga/raccoon", + "rel": "/software/repository/github/mlafarga/raccoon", + "avatar": "https://avatars.githubusercontent.com/u/20257371?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/barnesgroupICL/Driftfusion", + "url": "https://github.com/barnesgroupICL/Driftfusion", + "rel": "/software/repository/github/barnesgroupICL/Driftfusion", + "avatar": "https://avatars.githubusercontent.com/u/30349028?v=4", + "description": "An open source drift diffusion code based in MATLAB for simulating solar cells", + "topics": [] + }, + { + "uid": "github/reznik-lab/MIRTH", + "url": "https://github.com/reznik-lab/MIRTH", + "rel": "/software/repository/github/reznik-lab/MIRTH", + "avatar": "https://avatars.githubusercontent.com/u/60795367?v=4", + "description": "Metabolite Imputation via Rank Transformation and Harmonization", "topics": [] }, { - "uid": "github/AntonelliLab/seqcap_processor", - "url": "https://github.com/AntonelliLab/seqcap_processor", - "rel": "/software/repository/github/AntonelliLab/seqcap_processor", - "avatar": "https://avatars.githubusercontent.com/u/15021707?v=4", - "description": "Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics", + "uid": "github/roban/CosmoloPy", + "url": "https://github.com/roban/CosmoloPy", + "rel": "/software/repository/github/roban/CosmoloPy", + "avatar": "https://avatars.githubusercontent.com/u/113354?v=4", + "description": "a basic numpy/scipy-based cosmology package for python", "topics": [] }, { - "uid": "github/RasmussenLab/vamb", - "url": "https://github.com/RasmussenLab/vamb", - "rel": "/software/repository/github/RasmussenLab/vamb", - "avatar": "https://avatars.githubusercontent.com/u/50487949?v=4", - "description": "Variational autoencoder for metagenomic binning", - "topics": [] + "uid": "github/soilwater/crnpy", + "url": "https://github.com/soilwater/crnpy", + "rel": "/software/repository/github/soilwater/crnpy", + "avatar": "https://avatars.githubusercontent.com/u/73772799?v=4", + "description": "A Python toolbox for handling common tasks with cosmic-ray neutron probes", + "topics": [ + "cosmic-rays", + "cosmos", + "neutron-detection", + "python", + "soil-moisture", + "crnp" + ] }, { - "uid": "github/jordanlab/STing", - "url": "https://github.com/jordanlab/STing", - "rel": "/software/repository/github/jordanlab/STing", - "avatar": "https://avatars2.githubusercontent.com/u/22896069?v=4", - "description": "Ultrafast sequence typing and gene detection from NGS raw reads", + "uid": "github/DZeevi-Lab/TinkerHap", + "url": "https://github.com/DZeevi-Lab/TinkerHap", + "rel": "/software/repository/github/DZeevi-Lab/TinkerHap", + "avatar": "https://avatars.githubusercontent.com/u/184602495?v=4", + "description": "Read-Based Phasing Algorithm with Integrated Multi-Method Support for Enhanced Accuracy", "topics": [ - "mlst", - "cgmlst", - "kmer", - "cpp", + "genetic-analysis", + "genetics", "genomics", - "computational-biology", - "ngs", - "ngs-analysis", - "genes", - "databases", - "dna" + "genomics-analysis" ] }, { - "uid": "github/yangxiaolinyn/Lemon", - "url": "https://github.com/yangxiaolinyn/Lemon", - "rel": "/software/repository/github/yangxiaolinyn/Lemon", - "avatar": "https://avatars.githubusercontent.com/u/78379254?v=4", + "uid": "github/nugent-lab/FindPOTATOS-stable", + "url": "https://github.com/nugent-lab/FindPOTATOs-stable", + "rel": "/software/repository/github/nugent-lab/FindPOTATOS-stable", + "avatar": "https://avatars.githubusercontent.com/u/51678793?v=4", "description": null, "topics": [] }, { - "uid": "github/DidierMurilloF/FielDHub", - "url": "https://github.com/DidierMurilloF/FielDHub", - "rel": "/software/repository/github/DidierMurilloF/FielDHub", - "avatar": "https://avatars.githubusercontent.com/u/79462830?v=4", - "description": "FielDHub is an R Shiny design of experiments (DOE) app that aids in the creation of traditional, unreplicated, augmented and partially-replicated designs applied to agriculture, plant breeding, forestry, animal and biological sciences.", + "uid": "github/BigDataBiology/argNorm", + "url": "https://github.com/BigDataBiology/argNorm", + "rel": "/software/repository/github/BigDataBiology/argNorm", + "avatar": "https://avatars.githubusercontent.com/u/38910137?v=4", + "description": "ARG normalization by mapping to the ARO ontology.", "topics": [ - "experimental", - "design", - "breeding", - "agricultural" + "antibiotic-resistance", + "bioinformatics" ] }, { - "uid": "github/noraeisner/LATTE", - "url": "https://github.com/noraeisner/LATTE", - "rel": "/software/repository/github/noraeisner/LATTE", - "avatar": "https://avatars.githubusercontent.com/u/43934902?v=4", - "description": "Lightcurve Analysis Tool for Transiting Exoplanet", - "topics": [] + "uid": "github/BigDataBiology/macrel", + "url": "https://github.com/BigDataBiology/macrel", + "rel": "/software/repository/github/BigDataBiology/macrel", + "avatar": "https://avatars.githubusercontent.com/u/38910137?v=4", + "description": "Predict AMPs in (meta)genomes and peptides", + "topics": [ + "metagenomics", + "peptide", + "bioinformatics", + "biology", + "genomics", + "ngless" + ] }, { - "uid": "github/dpthorngren/PlanetSlicer", - "url": "https://github.com/dpthorngren/PlanetSlicer", - "rel": "/software/repository/github/dpthorngren/PlanetSlicer", - "avatar": "https://avatars.githubusercontent.com/u/948369?v=4", - "description": "A simple implementation of the orange-slice algorithm for fitting brightness maps to phase curves (from Cowan and Agol 2008) extended to also handle reflected light (Mayorga et al. 2020).", + "uid": "github/jaimerzp/limberjack.jl", + "url": "https://github.com/JaimeRZP/LimberJack.jl", + "rel": "/software/repository/github/jaimerzp/limberjack.jl", + "avatar": "https://avatars.githubusercontent.com/u/39957598?v=4", + "description": "Auto-differentiable methods for Cosmology", "topics": [ - "astronomy-astrophysics", - "python" + "auto-differentiation", + "cosmology" ] }, { - "uid": "github/Mik3M4n/BaCoN", - "url": "https://github.com/Mik3M4n/BaCoN", - "rel": "/software/repository/github/Mik3M4n/BaCoN", - "avatar": "https://avatars.githubusercontent.com/u/38292755?v=4", - "description": "BAyesian COsmological Network - a bayesian neural network for classification of dark energy/modified gravity power spectra", + "uid": "github/jlenain/flaapluc", + "url": "https://github.com/jlenain/flaapluc", + "rel": "/software/repository/github/jlenain/flaapluc", + "avatar": "https://avatars.githubusercontent.com/u/5399958?v=4", + "description": "Dirty but quick Fermi-LAT analysis", "topics": [] }, { - "uid": "github/Mik3M4n/EF-TIGRE", - "url": "https://github.com/Mik3M4n/EF-TIGRE", - "rel": "/software/repository/github/Mik3M4n/EF-TIGRE", - "avatar": "https://avatars.githubusercontent.com/u/38292755?v=4", - "description": "Effective Field Theory of Interacting dark energy with Gravitational REdshift", - "topics": [] + "uid": "github/jolie/tquery", + "url": "https://github.com/jolie/tquery", + "rel": "/software/repository/github/jolie/tquery", + "avatar": "https://avatars.githubusercontent.com/u/10729718?v=4", + "description": "A data-query framework based on a sound variant of the MongoDB aggregation framework", + "topics": [ + "jolie", + "microservices", + "data-handling", + "ephemeral" + ] }, { - "uid": "github/matteolucchini1/BHJet", - "url": "https://github.com/matteolucchini1/BHJet", - "rel": "/software/repository/github/matteolucchini1/BHJet", - "avatar": "https://avatars.githubusercontent.com/u/35686549?v=4", - "description": "Semi analytical black hole jet model, jetset group, Amsterdam", + "uid": "github/AshleySpindler/AstroVaDEr-Public", + "url": "https://github.com/AshleySpindler/AstroVaDEr-Public", + "rel": "/software/repository/github/AshleySpindler/AstroVaDEr-Public", + "avatar": "https://avatars.githubusercontent.com/u/16287289?v=4", + "description": null, "topics": [] }, { - "uid": "github/fedbiomed/fedbiomed", - "url": "https://github.com/fedbiomed/fedbiomed", - "rel": "/software/repository/github/fedbiomed/fedbiomed", - "avatar": "https://avatars.githubusercontent.com/u/131657914?v=4", - "description": "A collaborative learning framework for empowering biomedical research", - "topics": [ - "ai", - "biomedical", - "clinical", - "federated", - "learning", - "analytics", - "collaborative", - "healthcare", - "multicentric" - ] - }, - { - "uid": "github/xianggebenben/GraphSL", - "url": "https://github.com/xianggebenben/GraphSL", - "rel": "/software/repository/github/xianggebenben/GraphSL", - "avatar": "https://avatars.githubusercontent.com/u/13185300?v=4", - "description": "Graph Source Localization Library", + "uid": "github/semaphoreP/whereistheplanet", + "url": "https://github.com/semaphoreP/whereistheplanet", + "rel": "/software/repository/github/semaphoreP/whereistheplanet", + "avatar": "https://avatars.githubusercontent.com/u/2245740?v=4", + "description": "Prediciting the position of exoplanets", "topics": [ - "source-localization", - "inverse-problems" + "astronomy", + "exoplanets", + "python" ] }, { - "uid": "github/domschrei/mallob", - "url": "https://github.com/domschrei/mallob", - "rel": "/software/repository/github/domschrei/mallob", - "avatar": "https://avatars.githubusercontent.com/u/17687040?v=4", - "description": "Malleable Load Balancer. Massively Parallel Logic Backend. Award-winning SAT solving for the cloud.", + "uid": "github/rgcgithub/regenie", + "url": "https://github.com/rgcgithub/regenie", + "rel": "/software/repository/github/rgcgithub/regenie", + "avatar": "https://avatars.githubusercontent.com/u/14313709?v=4", + "description": "regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.", "topics": [] }, { - "uid": "github/dbuscher/pois", - "url": "https://github.com/dbuscher/pois", - "rel": "/software/repository/github/dbuscher/pois", - "avatar": "https://avatars.githubusercontent.com/u/1148470?v=4", - "description": "Python framework simulating the data from a ground-based optical interferometer", + "uid": "github/astrosupriyo/pyTANSPEC", + "url": "https://github.com/astrosupriyo/pyTANSPEC", + "rel": "/software/repository/github/astrosupriyo/pyTANSPEC", + "avatar": "https://avatars.githubusercontent.com/u/29644902?v=4", + "description": "Python tool for extracting 1D TANSPEC spectra from 2D image", "topics": [] }, { - "uid": "github/lmfit/lmfit-py", - "url": "https://github.com/lmfit/lmfit-py", - "rel": "/software/repository/github/lmfit/lmfit-py", - "avatar": "https://avatars.githubusercontent.com/u/6190878?v=4", - "description": "Non-Linear Least Squares Minimization, with flexible Parameter settings, based on scipy.optimize, and with many additional classes and methods for curve fitting. ", - "topics": [ - "python", - "scipy", - "curve-fitting", - "least-squares" - ] - }, - { - "uid": "github/open-and-sustainable/prismaid", - "url": "https://github.com/open-and-sustainable/prismaid", - "rel": "/software/repository/github/open-and-sustainable/prismaid", - "avatar": "https://avatars.githubusercontent.com/u/170118603?v=4", - "description": "Open Science AI Tools for Systematic, Protocol-Based Literature Reviews", + "uid": "github/amberbiology/scribl", + "url": "https://github.com/amberbiology/scribl", + "rel": "/software/repository/github/amberbiology/scribl", + "avatar": "https://avatars.githubusercontent.com/u/14062141?v=4", + "description": "Semantic Capture of Relationships In Biological Literature (scribl) ", "topics": [ - "systematic-literature-reviews", - "generative-ai", - "open-science", - "open-source" + "computational-biology", + "literature-mining", + "network-biology", + "systems-biology" ] }, { - "uid": "github/connor-makowski/type_enforced", - "url": "https://github.com/connor-makowski/type_enforced", - "rel": "/software/repository/github/connor-makowski/type_enforced", - "avatar": "https://avatars.githubusercontent.com/u/32932187?v=4", - "description": "A pure python runtime type enforcer for annotations. Enforce types in python functions and methods.", + "uid": "github/taehoryu/TDEmass", + "url": "https://github.com/taehoryu/TDEmass", + "rel": "/software/repository/github/taehoryu/TDEmass", + "avatar": "https://avatars.githubusercontent.com/u/30508125?v=4", + "description": null, "topics": [] }, { - "uid": "github/flatironinstitute/nifty-ls", - "url": "https://github.com/flatironinstitute/nifty-ls", - "rel": "/software/repository/github/flatironinstitute/nifty-ls", - "avatar": "https://avatars.githubusercontent.com/u/32853892?v=4", - "description": "A fast Lomb-Scargle periodogram. It's nifty, and uses a NUFFT!", + "uid": "github/e-merlin/eMERLIN_CASA_pipeline", + "url": "https://github.com/e-merlin/eMERLIN_CASA_pipeline", + "rel": "/software/repository/github/e-merlin/eMERLIN_CASA_pipeline", + "avatar": "https://avatars.githubusercontent.com/u/26597493?v=4", + "description": "This is CASA eMERLIN pipeline to calibrate data from the e-MERLIN array. Please fork the repository before making any changes and read the Coding Practices page in the wiki. Please add issues with the pipeline in the issues tab.", "topics": [ - "lomb-scargle-periodogram", - "spectral-analysis", - "time-series" + "radio-astronomy" ] }, { - "uid": "github/JianjunTan-Beijing/LPI-CSFFR", - "url": "https://github.com/JianjunTan-Beijing/LPI-CSFFR", - "rel": "/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", - "avatar": "https://avatars.githubusercontent.com/u/74161640?v=4", - "description": null, + "uid": "github/bedops/bedops", + "url": "https://github.com/bedops/bedops", + "rel": "/software/repository/github/bedops/bedops", + "avatar": "https://avatars.githubusercontent.com/u/5489260?v=4", + "description": ":microscope: BEDOPS: high-performance genomic feature operations", "topics": [ - "deep-learning", - "rpis", - "rna-protein-interactions", - "cnn", - "serial-feature-fusion", - "keras" + "bedops", + "c", + "c-plus-plus", + "bed", + "genomics", + "set", + "set-theory", + "conversion", + "compression", + "toolkit", + "parallel", + "pipeline", + "bioinformatics" ] }, { - "uid": "github/rhdtownsend/gyre", - "url": "https://github.com/rhdtownsend/gyre", - "rel": "/software/repository/github/rhdtownsend/gyre", - "avatar": "https://avatars.githubusercontent.com/u/13732464?v=4", - "description": "The GYRE Stellar Oscillation Code", + "uid": "github/kimpenn/VERSE", + "url": "https://github.com/kimpenn/VERSE", + "rel": "/software/repository/github/kimpenn/VERSE", + "avatar": "https://avatars.githubusercontent.com/u/66026549?v=4", + "description": "A versatile and efficient RNA-Seq read counting tool", "topics": [] }, { - "uid": "github/HITS-AIN/PINK", - "url": "https://github.com/HITS-AIN/PINK", - "rel": "/software/repository/github/HITS-AIN/PINK", - "avatar": "https://avatars.githubusercontent.com/u/40384418?v=4", - "description": "Parallelized rotation and flipping INvariant Kohonen maps", + "uid": "github/SebOliver/PCA", + "url": "https://github.com/SebOliver/PCA", + "rel": "/software/repository/github/SebOliver/PCA", + "avatar": "https://avatars.githubusercontent.com/u/8169971?v=4", + "description": "The folders in this file are those discussed in the paper: \"Principal Component Analysis and Radiative Transfer modelling of Spitzer IRS Spectra of Ultra Luminous Infrared Galaxies \" Hurley et al. 2012 Monthly Notices of the Royal Astronomical Society, 424 (3). pp. 2069-2078. ISSN 0035-8711 ", + "topics": [] + }, + { + "uid": "github/GalacticDynamics/unxt", + "url": "https://github.com/GalacticDynamics/unxt", + "rel": "/software/repository/github/GalacticDynamics/unxt", + "avatar": "https://avatars.githubusercontent.com/u/150391400?v=4", + "description": "Unitful Quantities in JAX", "topics": [ - "kohonen-map", - "machine-learning", - "astronomical-algorithms", - "som", - "som-training", - "self-organizing-map" + "jax", + "quantities", + "units", + "array", + "auto-differentiation" ] }, { - "uid": "github/HITS-AIN/GPCC.jl", - "url": "https://github.com/HITS-AIN/GPCC.jl", - "rel": "/software/repository/github/HITS-AIN/GPCC.jl", - "avatar": "https://avatars.githubusercontent.com/u/40384418?v=4", - "description": "Gaussian process cross correlation", + "uid": "github/HaowenZhang/TRINITY", + "url": "https://github.com/HaowenZhang/TRINITY", + "rel": "/software/repository/github/HaowenZhang/TRINITY", + "avatar": "https://avatars.githubusercontent.com/u/45951249?v=4", + "description": "An empirical model that statistically connects dark matter halos, galaxies and supermassive black holes from z=0-10.", "topics": [] }, { - "uid": "github/kuadrat/data_slicer", - "url": "https://github.com/kuadrat/data-slicer", - "rel": "/software/repository/github/kuadrat/data_slicer", - "avatar": "https://avatars.githubusercontent.com/u/29949116?v=4", + "uid": "github/barnabytprowe/imcom", + "url": "https://github.com/barnabytprowe/imcom", + "rel": "/software/repository/github/barnabytprowe/imcom", + "avatar": "https://avatars.githubusercontent.com/u/1454961?v=4", + "description": "Public repository for the IMCOM (IMage COMbination) software described in Rowe, Hirata & Rhodes (2011)", + "topics": [] + }, + { + "uid": "github/inigozubeldia/cosmocnc", + "url": "https://github.com/inigozubeldia/cosmocnc", + "rel": "/software/repository/github/inigozubeldia/cosmocnc", + "avatar": "https://avatars.githubusercontent.com/u/49374875?v=4", "description": null, "topics": [] }, { - "uid": "github/spacetelescope/specviz", - "url": "https://github.com/spacetelescope/specviz", - "rel": "/software/repository/github/spacetelescope/specviz", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "An interactive astronomical 1D spectra analysis tool.", - "topics": [ - "astronomy", - "spectroscopy", - "viewer", - "data-analysis", - "python" - ] + "uid": "github/inigozubeldia/szifi", + "url": "https://github.com/inigozubeldia/szifi", + "rel": "/software/repository/github/inigozubeldia/szifi", + "avatar": "https://avatars.githubusercontent.com/u/49374875?v=4", + "description": null, + "topics": [] }, { - "uid": "github/spacetelescope/stginga", - "url": "https://github.com/spacetelescope/stginga", - "rel": "/software/repository/github/spacetelescope/stginga", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Ginga products specific to STScI data analysis.", - "topics": [ - "astronomy", - "image", - "table", - "viewer", - "astropy", - "ginga" - ] + "uid": "github/dynamics-of-stellar-systems/dynamite_release", + "url": "https://github.com/dynamics-of-stellar-systems/dynamite_release", + "rel": "/software/repository/github/dynamics-of-stellar-systems/dynamite_release", + "avatar": "https://avatars.githubusercontent.com/u/53822020?v=4", + "description": "dynamics, age and metallicity indicators tracing evolution", + "topics": [] }, { - "uid": "github/spacetelescope/stsynphot_refactor", - "url": "https://github.com/spacetelescope/stsynphot_refactor", - "rel": "/software/repository/github/spacetelescope/stsynphot_refactor", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Synthetic photometry using Astropy for HST and JWST", - "topics": [ - "astronomy", - "python", - "astropy", - "synthetic-photometry", - "synphot", - "hst", - "jwst" - ] + "uid": "github/bwkeller/PASTA", + "url": "https://github.com/bwkeller/PASTA", + "rel": "/software/repository/github/bwkeller/PASTA", + "avatar": "https://avatars.githubusercontent.com/u/935082?v=4", + "description": "Python Astronomical Stacking Tool Array", + "topics": [] }, { - "uid": "github/spacetelescope/spaceKLIP", - "url": "https://github.com/spacetelescope/spaceKLIP", - "rel": "/software/repository/github/spacetelescope/spaceKLIP", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Pipeline for reducing JWST high-contrast imaging data. Published in Kammerer et al. 2022 and Carter et al. 2022.", + "uid": "github/jupyter/notebook", + "url": "https://github.com/jupyter/notebook", + "rel": "/software/repository/github/jupyter/notebook", + "avatar": "https://avatars1.githubusercontent.com/u/7388996?v=4", + "description": "Jupyter Interactive Notebook", "topics": [] }, { - "uid": "github/spacetelescope/astronify", - "url": "https://github.com/spacetelescope/astronify", - "rel": "/software/repository/github/spacetelescope/astronify", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Astronomical data sonification.", + "uid": "github/maxpumperla/hyperas", + "url": "https://github.com/maxpumperla/hyperas", + "rel": "/software/repository/github/maxpumperla/hyperas", + "avatar": "https://avatars.githubusercontent.com/u/3462566?v=4", + "description": "Keras + Hyperopt: A very simple wrapper for convenient hyperparameter optimization", "topics": [ - "astronomy", - "sonification" + "hyperopt", + "keras", + "hyperparameter-optimization" ] }, { - "uid": "github/spacetelescope/imexam", - "url": "https://github.com/spacetelescope/imexam", - "rel": "/software/repository/github/spacetelescope/imexam", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "imexam is a python tool for simple image examination, and plotting, with similar functionality to IRAF's imexamine", - "topics": [ - "astronomy", - "data-analysis", - "viewer", - "astropy", - "ds9", - "ginga" - ] + "uid": "github/ryanhausen/fitsmap", + "url": "https://github.com/ryanhausen/fitsmap", + "rel": "/software/repository/github/ryanhausen/fitsmap", + "avatar": "https://avatars.githubusercontent.com/u/13540823?v=4", + "description": "FitsMap: A Simple, Lightweight Tool For Displaying Interactive Astronomical Image and Catalog Data", + "topics": [] }, { - "uid": "github/spacetelescope/exovetter", - "url": "https://github.com/spacetelescope/exovetter", - "rel": "/software/repository/github/spacetelescope/exovetter", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Exoplanet vetting", - "topics": [ - "astronomy", - "exoplanets", - "verification", - "exoplanet-transits" - ] + "uid": "github/GregoryFaust/samblaster", + "url": "https://github.com/GregoryFaust/samblaster", + "rel": "/software/repository/github/GregoryFaust/samblaster", + "avatar": "https://avatars.githubusercontent.com/u/6653381?v=4", + "description": "samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.", + "topics": [] }, { - "uid": "github/spacetelescope/mirage", - "url": "https://github.com/spacetelescope/mirage", - "rel": "/software/repository/github/spacetelescope/mirage", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "This code can be used to generate simulated NIRCam, NIRISS, or FGS data ", - "topics": [ - "astronomy", - "simulator", - "nircam", - "niriss", - "fgs" - ] + "uid": "github/GregoryFaust/yaha", + "url": "https://github.com/GregoryFaust/yaha", + "rel": "/software/repository/github/GregoryFaust/yaha", + "avatar": "https://avatars.githubusercontent.com/u/6653381?v=4", + "description": "yaha: a flexible, sensitive and accurate DNA alignment tool designed to find optimal split-read mappings on single-end queries from 100bp to 32kb.", + "topics": [] }, { - "uid": "github/spacetelescope/jdaviz", - "url": "https://github.com/spacetelescope/jdaviz", - "rel": "/software/repository/github/spacetelescope/jdaviz", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "JWST astronomical data analysis tools in the Jupyter platform", + "uid": "github/daddeptr/Needlets", + "url": "https://github.com/daddeptr/Needlets", + "rel": "/software/repository/github/daddeptr/Needlets", + "avatar": "https://avatars.githubusercontent.com/u/6753577?v=4", + "description": null, "topics": [] }, { - "uid": "github/spacetelescope/specview", - "url": "https://github.com/spacetelescope/specview", - "rel": "/software/repository/github/spacetelescope/specview", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Archived, see https://github.com/spacetelescope/specviz for future development. Spectrum visualization, manipulation, and fitting", + "uid": "github/MFaymon/spINAR", + "url": "https://github.com/MFaymon/spINAR", + "rel": "/software/repository/github/MFaymon/spINAR", + "avatar": "https://avatars.githubusercontent.com/u/105346023?v=4", + "description": "Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.", "topics": [ - "spectroscopy", - "astronomy", - "viewer", - "data-analysis" + "bootstrapping", + "count-data", + "parametric-estimation", + "penalization", + "semiparametric-estimation", + "simulation", + "time-series", + "validation" ] }, { - "uid": "github/spacetelescope/pystortion", - "url": "https://github.com/spacetelescope/pystortion", - "rel": "/software/repository/github/spacetelescope/pystortion", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": null, + "uid": "github/lasseignelab/CINmetrics", + "url": "https://github.com/lasseignelab/CINmetrics", + "rel": "/software/repository/github/lasseignelab/CINmetrics", + "avatar": "https://avatars.githubusercontent.com/u/46378910?v=4", + "description": "CINmetrics R package", "topics": [] }, { - "uid": "github/spacetelescope/synphot_refactor", - "url": "https://github.com/spacetelescope/synphot_refactor", - "rel": "/software/repository/github/spacetelescope/synphot_refactor", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "Synthetic photometry using Astropy", - "topics": [ - "astronomy", - "astropy", - "synthetic-photometry", - "python", - "synphot" - ] - }, - { - "uid": "github/spacetelescope/hst_cosmic_rays", - "url": "https://github.com/spacetelescope/hst_cosmic_rays", - "rel": "/software/repository/github/spacetelescope/hst_cosmic_rays", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": null, + "uid": "github/ThomasBakx/cobra", + "url": "https://github.com/ThomasBakx/cobra", + "rel": "/software/repository/github/ThomasBakx/cobra", + "avatar": "https://avatars.githubusercontent.com/u/51948353?v=4", + "description": "cobra git repository", "topics": [] }, { - "uid": "github/spacetelescope/stsdas_stripped", - "url": "https://github.com/spacetelescope/stsdas_stripped", - "rel": "/software/repository/github/spacetelescope/stsdas_stripped", - "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", - "description": "STSDAS/TABLES (nonfunctional / for reference only)", + "uid": "github/jlillo/tpfplotter", + "url": "https://github.com/jlillo/tpfplotter", + "rel": "/software/repository/github/jlillo/tpfplotter", + "avatar": "https://avatars.githubusercontent.com/u/6754663?v=4", + "description": "TESS TPF plotter with Gaia catalog", "topics": [] }, { - "uid": "github/GreenScheduler/cats", - "url": "https://github.com/GreenScheduler/cats", - "rel": "/software/repository/github/GreenScheduler/cats", - "avatar": "https://avatars.githubusercontent.com/u/132558689?v=4", - "description": "CATS: the Climate-Aware Task Scheduler \ud83d\udc08 \ud83d\udc08\u200d\u2b1b", + "uid": "github/wcxve/elisa", + "url": "https://github.com/wcxve/elisa", + "rel": "/software/repository/github/wcxve/elisa", + "avatar": "https://avatars.githubusercontent.com/u/58248583?v=4", + "description": "Efficient library for spectral analysis in high-energy astrophysics.", "topics": [ - "climate", - "computing", - "scheduling", - "carbon", - "carbon-footprint", - "electricity", - "electricity-consumption", - "energy", - "energy-consumption", - "job-scheduler" + "spectral-analysis", + "python", + "astrophysics", + "astronomy", + "jax", + "numpyro", + "elisa", + "gamma-ray", + "x-ray" ] }, { - "uid": "github/Ciela-Institute/caustics", - "url": "https://github.com/Ciela-Institute/caustics", - "rel": "/software/repository/github/Ciela-Institute/caustics", - "avatar": "https://avatars.githubusercontent.com/u/110192370?v=4", - "description": "A gravitational lensing simulator for the machine learning era.", + "uid": "github/coleygroup/pyscreener", + "url": "https://github.com/coleygroup/pyscreener", + "rel": "/software/repository/github/coleygroup/pyscreener", + "avatar": "https://avatars.githubusercontent.com/u/55363694?v=4", + "description": "pythonic interface to virtual screening software", "topics": [ - "gravitational-lensing", - "pytorch" + "virtual-screening", + "computational-biology", + "molecular-docking", + "distributed-computing", + "ray" ] }, { - "uid": "github/gymreklab/GangSTR", - "url": "https://github.com/gymreklab/GangSTR", - "rel": "/software/repository/github/gymreklab/GangSTR", - "avatar": "https://avatars.githubusercontent.com/u/19779699?v=4", - "description": "A tool for profiling long STRs from short reads", - "topics": [] - }, - { - "uid": "github/gymreklab/chips", - "url": "https://github.com/gymreklab/chips", - "rel": "/software/repository/github/gymreklab/chips", - "avatar": "https://avatars.githubusercontent.com/u/19779699?v=4", - "description": "Simulation tool for ChIP- and other -seq experiments", - "topics": [] + "uid": "github/alexriss/SpmImageTycoon.jl", + "url": "https://github.com/alexriss/SpmImageTycoon.jl", + "rel": "/software/repository/github/alexriss/SpmImageTycoon.jl", + "avatar": "https://avatars.githubusercontent.com/u/1452525?v=4", + "description": "Organize Scanning Probe Microscopy (SPM, STM, AFM) Images and Spectra.", + "topics": [ + "spm", + "afm", + "stm", + "julia", + "electron", + "javascript", + "julialang", + "spectroscopy" + ] }, { - "uid": "github/phylo42/EPIK", - "url": "https://github.com/phylo42/EPIK", - "rel": "/software/repository/github/phylo42/EPIK", - "avatar": "https://avatars.githubusercontent.com/u/61278577?v=4", - "description": "Alignment-free phylogenetic placement", + "uid": "github/nservant/HiC-Pro", + "url": "https://github.com/nservant/HiC-Pro", + "rel": "/software/repository/github/nservant/HiC-Pro", + "avatar": "https://avatars.githubusercontent.com/u/10778219?v=4", + "description": "HiC-Pro: An optimized and flexible pipeline for Hi-C data processing", "topics": [] }, { - "uid": "github/phylo42/RAPPAS", - "url": "https://github.com/phylo42/RAPPAS", - "rel": "/software/repository/github/phylo42/RAPPAS", - "avatar": "https://avatars.githubusercontent.com/u/61278577?v=4", - "description": "Rapid, Alignment-free, Phylogenetic Placement via Ancestral Sequences", + "uid": "github/weizhongli/cdhit", + "url": "https://github.com/weizhongli/cdhit", + "rel": "/software/repository/github/weizhongli/cdhit", + "avatar": "https://avatars.githubusercontent.com/u/12239246?v=4", + "description": "clusters and compares protein or nucleotide sequences.", "topics": [ - "placement", - "phylogenetic-placement", - "metagenomics", - "metabarcoding", - "phylogenetics", - "genetic-markers", - "kmers", - "phylo-kmers", - "taxonomic-classification" + "clustering", + "clustering-algorithm" ] }, { - "uid": "github/IanHeywood/oxkat", - "url": "https://github.com/IanHeywood/oxkat", - "rel": "/software/repository/github/IanHeywood/oxkat", - "avatar": "https://avatars.githubusercontent.com/u/6533799?v=4", - "description": "MeerKAT calibration and imaging scripts", - "topics": [] - }, - { - "uid": "github/IanHeywood/pony3d", - "url": "https://github.com/IanHeywood/pony3d", - "rel": "/software/repository/github/IanHeywood/pony3d", - "avatar": "https://avatars.githubusercontent.com/u/6533799?v=4", + "uid": "github/KostasValeckas/PyLongslit", + "url": "https://github.com/KostasValeckas/PyLongslit", + "rel": "/software/repository/github/KostasValeckas/PyLongslit", + "avatar": "https://avatars.githubusercontent.com/u/117293401?v=4", "description": null, "topics": [] }, { - "uid": "github/landlab/landlab", - "url": "https://github.com/landlab/landlab", - "rel": "/software/repository/github/landlab/landlab", - "avatar": "https://avatars1.githubusercontent.com/u/7543483?v=4", - "description": "Landlab codebase, wiki, and tests", + "uid": "github/Peppags/CNN-SVR", + "url": "https://github.com/Peppags/CNN-SVR", + "rel": "/software/repository/github/Peppags/CNN-SVR", + "avatar": "https://avatars.githubusercontent.com/u/40748992?v=4", + "description": "CNN-SVR: A deep learning approach for predicting CRISPR/Cas9 guide RNA on-target activity", "topics": [] }, { - "uid": "github/BIC-MNI/libminc", - "url": "https://github.com/BIC-MNI/libminc", - "rel": "/software/repository/github/BIC-MNI/libminc", - "avatar": "https://avatars.githubusercontent.com/u/1517197?v=4", - "description": "libminc is the core library and API of the MINC toolkit", + "uid": "github/hope-data-science/tidyfst", + "url": "https://github.com/hope-data-science/tidyfst", + "rel": "/software/repository/github/hope-data-science/tidyfst", + "avatar": "https://avatars1.githubusercontent.com/u/32947502?v=4", + "description": "Tidy Verbs for Fast Data Manipulation", "topics": [] }, { - "uid": "github/ParisAstronomicalDataCentre/OPUS", - "url": "https://github.com/ParisAstronomicalDataCentre/OPUS", - "rel": "/software/repository/github/ParisAstronomicalDataCentre/OPUS", - "avatar": "https://avatars.githubusercontent.com/u/18441663?v=4", - "description": "Observatoire de Paris UWS System (OPUS): UWS web client/server developped at the Paris Astronomical Data Centre.", + "uid": "github/kellino/DiscreteEntropy.jl", + "url": "https://github.com/kellino/DiscreteEntropy.jl", + "rel": "/software/repository/github/kellino/DiscreteEntropy.jl", + "avatar": "https://avatars.githubusercontent.com/u/12098944?v=4", + "description": "Estimation of Shannon Entropy for Discrete Random Variables", "topics": [] }, { - "uid": "github/christiangil/StellarSpectraObservationFitting.jl", - "url": "https://github.com/christiangil/StellarSpectraObservationFitting.jl", - "rel": "/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", - "avatar": "https://avatars.githubusercontent.com/u/32468452?v=4", - "description": "Data-driven models for extremely precise radial velocity (EPRV) spectra", + "uid": "github/rzellem/EXOTIC", + "url": "https://github.com/rzellem/EXOTIC", + "rel": "/software/repository/github/rzellem/EXOTIC", + "avatar": "https://avatars.githubusercontent.com/u/13021111?v=4", + "description": "EXOplanet Transit Interpretation Code", "topics": [] }, { - "uid": "github/kmlefran/aiida-aimall", - "url": "https://github.com/kmlefran/aiida-aimall", - "rel": "/software/repository/github/kmlefran/aiida-aimall", - "avatar": "https://avatars.githubusercontent.com/u/138684774?v=4", - "description": null, + "uid": "github/AsterLight0626/Twinkle", + "url": "https://github.com/AsterLight0626/Twinkle", + "rel": "/software/repository/github/AsterLight0626/Twinkle", + "avatar": "https://avatars.githubusercontent.com/u/102959521?v=4", + "description": "A GPU-based High-efficiency binary microlensing code", "topics": [] }, { - "uid": "github/lilyminium/psiresp", - "url": "https://github.com/lilyminium/psiresp", - "rel": "/software/repository/github/lilyminium/psiresp", - "avatar": "https://avatars.githubusercontent.com/u/31115101?v=4", - "description": "RESP with inter- and intra-molecular constraints in Psi4.", + "uid": "github/galaxyecology/tools-ecology", + "url": "https://github.com/galaxyecology/tools-ecology", + "rel": "/software/repository/github/galaxyecology/tools-ecology", + "avatar": "https://avatars.githubusercontent.com/u/46970847?v=4", + "description": "Galaxy Tools maintained and developed by the GalaxyE community", "topics": [ - "psi4", - "atomic-charges", - "python", - "molecular-dynamics" + "galaxy", + "ecology", + "pndb" ] }, { - "uid": "github/blackrim/phyutility", - "url": "https://github.com/blackrim/phyutility", - "rel": "/software/repository/github/blackrim/phyutility", - "avatar": "https://avatars.githubusercontent.com/u/160553?v=4", - "description": "simple analyses or modifications on both phylogenetic trees and data matrices", + "uid": "github/TBLabFJD/WHALE", + "url": "https://github.com/TBLabFJD/WHALE", + "rel": "/software/repository/github/TBLabFJD/WHALE", + "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", + "description": "WHALE: (W)orkflow for (H)uman-genome (A)nalysis of (L)ong-read (E)xperiments", "topics": [] }, { - "uid": "github/kingyin3613/RingsPy", - "url": "https://github.com/kingyin3613/ringspy", - "rel": "/software/repository/github/kingyin3613/RingsPy", - "avatar": "https://avatars.githubusercontent.com/u/17798082?v=4", - "description": "A Python automated geometric generation tool that generates 3D meshes of prismatic cellular solids with radial growth rules based on Voronoi diagrams.", + "uid": "github/TBLabFJD/VariantCallingFJD", + "url": "https://github.com/TBLabFJD/VariantCallingFJD", + "rel": "/software/repository/github/TBLabFJD/VariantCallingFJD", + "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", + "description": null, "topics": [] }, { - "uid": "github/JuliaGeo/CFTime.jl", - "url": "https://github.com/JuliaGeo/CFTime.jl", - "rel": "/software/repository/github/JuliaGeo/CFTime.jl", - "avatar": "https://avatars.githubusercontent.com/u/10616454?v=4", - "description": "Julia library for decoding time units conforming to the Climate and Forecasting (CF) netCDF conventions.", - "topics": [ - "cf-conventions", - "julia", - "netcdf", - "time" - ] + "uid": "github/TBLabFJD/DBofAFs", + "url": "https://github.com/TBLabFJD/DBofAFs", + "rel": "/software/repository/github/TBLabFJD/DBofAFs", + "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", + "description": "Pipeline for database creation of allele frequencies ", + "topics": [] }, { - "uid": "github/ClaraLage/Portfolio-Transition", - "url": "https://github.com/ClaraLage/Portfolio-Transition", - "rel": "/software/repository/github/ClaraLage/Portfolio-Transition", - "avatar": "https://avatars.githubusercontent.com/u/76178917?v=4", - "description": "https://hal.archives-ouvertes.fr/hal-03423114/", + "uid": "github/TBLabFJD/PARROT-FJD", + "url": "https://github.com/TBLabFJD/PARROT-FJD", + "rel": "/software/repository/github/TBLabFJD/PARROT-FJD", + "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", + "description": "(P)ipeline of (A)nalysis and (R)esearch of (R)are diseases (O)ptimized in (T)blab-Fundaci\u00f3n Jim\u00e9nez D\u00edaz. ", "topics": [] }, { - "uid": "github/NASA-PDS/naif-pds4-bundler", - "url": "https://github.com/NASA-PDS/naif-pds4-bundler", - "rel": "/software/repository/github/NASA-PDS/naif-pds4-bundler", - "avatar": "https://avatars.githubusercontent.com/u/46757714?v=4", - "description": "Package to generate PDS4 SPICE Kernels Archives", + "uid": "github/LiberTEM/LiberTEM", + "url": "https://github.com/LiberTEM/LiberTEM", + "rel": "/software/repository/github/LiberTEM/LiberTEM", + "avatar": "https://avatars0.githubusercontent.com/u/35299996?v=4", + "description": "Open pixelated STEM framework", "topics": [ - "python", - "planetary-science", - "planetary-data", - "data", - "archive", - "spice", - "geometry", - "geometry-processing", - "navigation" + "electron-microscopy", + "data-processing", + "image-processing", + "python" ] }, { - "uid": "github/maxibor/sam2lca", - "url": "https://github.com/maxibor/sam2lca", - "rel": "/software/repository/github/maxibor/sam2lca", - "avatar": "https://avatars.githubusercontent.com/u/8630837?v=4", - "description": "Lowest Common Ancestor from a SAM/BAM/CRAM alignment file", + "uid": "github/darrencroton/sage", + "url": "https://github.com/darrencroton/sage", + "rel": "/software/repository/github/darrencroton/sage", + "avatar": "https://avatars.githubusercontent.com/u/2062219?v=4", + "description": "Home of the Semi-Analytic Galaxy Evolution (SAGE) galaxy formation model", "topics": [] }, { - "uid": "github/ckm3/Py-PDM", - "url": "https://github.com/ckm3/Py-PDM", - "rel": "/software/repository/github/ckm3/Py-PDM", - "avatar": "https://avatars.githubusercontent.com/u/46397714?v=4", - "description": "A Python wrapper of the Phase Dispersion Minimization (PDM), which is a C code written by Stellingwerf.", + "uid": "github/moble/GWFrames", + "url": "https://github.com/moble/GWFrames", + "rel": "/software/repository/github/moble/GWFrames", + "avatar": "https://avatars.githubusercontent.com/u/1470769?v=4", + "description": "Manipulate gravitational waveforms\u2014changing frames, and so on.", + "topics": [] + }, + { + "uid": "github/moble/scri", + "url": "https://github.com/moble/scri", + "rel": "/software/repository/github/moble/scri", + "avatar": "https://avatars.githubusercontent.com/u/1470769?v=4", + "description": "Python/numba code for manipulating time-dependent functions of spin-weighted spherical harmonics", "topics": [ - "phase-dispersion-minimization", - "astrophysics", - "periodogram" + "astronomy", + "gravitational-waves", + "python" ] }, { - "uid": "github/ckm3/Deep-Transit", - "url": "https://github.com/ckm3/Deep-Transit", - "rel": "/software/repository/github/ckm3/Deep-Transit", - "avatar": "https://avatars.githubusercontent.com/u/46397714?v=4", - "description": "Transit identification based on the object detection algorithm", + "uid": "github/xdqso/xdqso", + "url": "https://github.com/xdqso/xdqso", + "rel": "/software/repository/github/xdqso/xdqso", + "avatar": "https://avatars.githubusercontent.com/u/9202071?v=4", + "description": "Quasar classification with XD", "topics": [] }, { - "uid": "github/unmannedlab/ekf_cal", - "url": "https://github.com/unmannedlab/ekf_cal", - "rel": "/software/repository/github/unmannedlab/ekf_cal", - "avatar": "https://avatars.githubusercontent.com/u/57012544?v=4", - "description": "Extended Kalman Filter-Based Calibration and Localization", - "topics": [] + "uid": "github/koide3/small_gicp", + "url": "https://github.com/koide3/small_gicp", + "rel": "/software/repository/github/koide3/small_gicp", + "avatar": "https://avatars.githubusercontent.com/u/31344317?v=4", + "description": "Efficient and parallel algorithms for point cloud registration [C++, Python]", + "topics": [ + "cpp", + "icp", + "multi-threading", + "pcl", + "pointcloud", + "python", + "registration", + "scan-matching", + "point-cloud-regstration", + "open3d" + ] }, { - "uid": "github/BerkeleyLab/caffeine", - "url": "https://github.com/BerkeleyLab/caffeine", - "rel": "/software/repository/github/BerkeleyLab/caffeine", - "avatar": "https://avatars.githubusercontent.com/u/18706005?v=4", - "description": "A parallel runtime library for Fortran compilers", + "uid": "github/padster/pyNeuroTrace", + "url": "https://github.com/padster/pyNeuroTrace", + "rel": "/software/repository/github/padster/pyNeuroTrace", + "avatar": "https://avatars.githubusercontent.com/u/848804?v=4", + "description": "Python code for processing neural timeseries", "topics": [ - "coarray", - "coarray-fortran", - "fortran-2018", - "pgas", - "partitioned-global-address-space", - "parallel-programming", - "runtime-library", - "fortran-2023", - "parallel-computing", - "parallelism" + "analytics", + "neuroscience", + "timeseries" ] }, { - "uid": "github/portsmouth/cmbview", - "url": "https://github.com/portsmouth/cmbview", - "rel": "/software/repository/github/portsmouth/cmbview", - "avatar": "https://avatars.githubusercontent.com/u/2774364?v=4", - "description": "Automatically exported from code.google.com/p/cmbview", + "uid": "github/fhcrc/seqmagick", + "url": "https://github.com/fhcrc/seqmagick", + "rel": "/software/repository/github/fhcrc/seqmagick", + "avatar": "https://avatars.githubusercontent.com/u/473538?v=4", + "description": "An imagemagick-like frontend to Biopython SeqIO", "topics": [] }, { - "uid": "github/ksahlin/strobealign", - "url": "https://github.com/ksahlin/strobealign", - "rel": "/software/repository/github/ksahlin/strobealign", - "avatar": "https://avatars.githubusercontent.com/u/1714667?v=4", - "description": "Aligns short reads using dynamic seed size with strobemers", + "uid": "github/swiss-armed-forces/openburst", + "url": "https://github.com/Swiss-Armed-Forces/openburst", + "rel": "/software/repository/github/swiss-armed-forces/openburst", + "avatar": "https://avatars.githubusercontent.com/u/156803577?v=4", + "description": "Software framework for the development and testing of sensor coverage and real-time air target detection analysis.", "topics": [ - "alignment", - "illumina", - "bioinformatics", - "strobemers", - "short-read-mapping" + "air", + "coverage", + "pcl", + "pet", + "radar", + "surveillance" ] }, { - "uid": "github/mihanke/athos", - "url": "https://github.com/mihanke/athos", - "rel": "/software/repository/github/mihanke/athos", - "avatar": "https://avatars.githubusercontent.com/u/42927573?v=4", - "description": "ATHOS: On-the-fly stellar parameter determination of FGK stars based on flux ratios from optical spectra", + "uid": "github/bmvdgeijn/WASP", + "url": "https://github.com/bmvdgeijn/WASP", + "rel": "/software/repository/github/bmvdgeijn/WASP", + "avatar": "https://avatars.githubusercontent.com/u/3441538?v=4", + "description": "WASP: allele-specific pipeline for unbiased read mapping and molecular QTL discovery", "topics": [] }, { - "uid": "github/bokeh/bokeh", - "url": "https://github.com/bokeh/bokeh", - "rel": "/software/repository/github/bokeh/bokeh", - "avatar": "https://avatars2.githubusercontent.com/u/8440965?v=4", - "description": "Interactive Data Visualization in the browser, from Python", + "uid": "github/bramvandijk88/cacatoo", + "url": "https://github.com/bramvandijk88/cacatoo", + "rel": "/software/repository/github/bramvandijk88/cacatoo", + "avatar": "https://avatars.githubusercontent.com/u/11132992?v=4", + "description": "A javascript library for building, exploring, and sharing spatially structured models of biological systems", + "topics": [] + }, + { + "uid": "github/hpgem/nanomesh", + "url": "https://github.com/hpgem/nanomesh", + "rel": "/software/repository/github/hpgem/nanomesh", + "avatar": "https://avatars.githubusercontent.com/u/50169972?v=4", + "description": "Python workflow tool for generating meshes from 2D and 3D microscopy image data", "topics": [ - "bokeh", + "meshing", + "microscopy", "python", - "interactive-plots", - "javascript", - "visualization", - "plotting", - "plots", - "data-visualisation", - "notebooks", "jupyter", - "visualisation", - "numfocus" + "image-processing" ] }, { - "uid": "github/jbytecode/LinRegOutliers", - "url": "https://github.com/jbytecode/LinRegOutliers", - "rel": "/software/repository/github/jbytecode/LinRegOutliers", - "avatar": "https://avatars1.githubusercontent.com/u/8011702?v=4", - "description": "Direct and robust methods for outlier detection in linear regression", - "topics": [ - "outliers-detection", - "linear-regression", - "robust-statistics" - ] + "uid": "github/GaetanBenoitDev/metaMDBG", + "url": "https://github.com/GaetanBenoitDev/metaMDBG", + "rel": "/software/repository/github/GaetanBenoitDev/metaMDBG", + "avatar": "https://avatars.githubusercontent.com/u/79975313?v=4", + "description": "MetaMDBG: a lightweight assembler for long and accurate metagenomics reads.", + "topics": [] }, { - "uid": "github/jbytecode/OperationsResearchModels.jl", - "url": "https://github.com/jbytecode/OperationsResearchModels.jl", - "rel": "/software/repository/github/jbytecode/OperationsResearchModels.jl", - "avatar": "https://avatars.githubusercontent.com/u/8011702?v=4", - "description": "A Julia package for operations research problems", + "uid": "github/OSeMOSYS/otoole", + "url": "https://github.com/OSeMOSYS/otoole", + "rel": "/software/repository/github/OSeMOSYS/otoole", + "avatar": "https://avatars.githubusercontent.com/u/14215860?v=4", + "description": "OSeMOSYS Tools for Energy", "topics": [ - "assignment-problem", - "maximum-flow", - "shortest-path", - "transportation-problem", - "cpm", - "johnson-algorithm", - "knapsack-problem", - "p-median-problem", - "pert", - "scheduling", - "minimum-spanning-tree" + "energy", + "osemosys", + "energy-system-modelling", + "energy-system" + ] + }, + { + "uid": "github/vergauwenthomas/MetObs_toolkit", + "url": "https://github.com/vergauwenthomas/MetObs_toolkit", + "rel": "/software/repository/github/vergauwenthomas/MetObs_toolkit", + "avatar": "https://avatars.githubusercontent.com/u/82087298?v=4", + "description": "A toolkit for using non-traditional meteorological observations", + "topics": [ + "climate", + "meteorology", + "python", + "toolkit" ] }, { - "uid": "github/jbytecode/JMcDM", - "url": "https://github.com/jbytecode/JMcDM", - "rel": "/software/repository/github/jbytecode/JMcDM", - "avatar": "https://avatars.githubusercontent.com/u/8011702?v=4", - "description": "A package for Multiple criteria decision-making techniques in Julia", + "uid": "github/plazar/coast_guard", + "url": "https://github.com/plazar/coast_guard", + "rel": "/software/repository/github/plazar/coast_guard", + "avatar": "https://avatars.githubusercontent.com/u/212219?v=4", + "description": "A python/PSRCHIVE-based timing pipeline for reducing Effelsberg data.", "topics": [] }, { - "uid": "github/eliotayache/GAMMA", - "url": "https://github.com/eliotayache/GAMMA", - "rel": "/software/repository/github/eliotayache/GAMMA", - "avatar": "https://avatars.githubusercontent.com/u/28777824?v=4", - "description": "Relativistic hydro and local cooling on a moving mesh", + "uid": "github/plazar/TOASTER", + "url": "https://github.com/plazar/TOASTER", + "rel": "/software/repository/github/plazar/TOASTER", + "avatar": "https://avatars.githubusercontent.com/u/212219?v=4", + "description": "A framework for generating, storing and tracking high-precision TOAs for PTAs as well as observation meta data and processing details.", "topics": [] }, { - "uid": "github/liangcheng-hrbmu/EnrichDO", - "url": "https://github.com/liangcheng-hrbmu/EnrichDO", - "rel": "/software/repository/github/liangcheng-hrbmu/EnrichDO", - "avatar": "https://avatars.githubusercontent.com/u/15272581?v=4", - "description": "a Bioinformatics Tool for Annotating and Enrichment Analysis with Disease Ontology", + "uid": "github/palaeoware/trevosim", + "url": "https://github.com/palaeoware/trevosim", + "rel": "/software/repository/github/palaeoware/trevosim", + "avatar": "https://avatars.githubusercontent.com/u/38782482?v=4", + "description": "TREvoSim - The [Tr]ee [Evo]lutionary [Sim]ulator program", "topics": [] }, { - "uid": "github/miriamkw/GluPredKit", - "url": "https://github.com/miriamkw/GluPredKit", - "rel": "/software/repository/github/miriamkw/GluPredKit", - "avatar": "https://avatars.githubusercontent.com/u/47831805?v=4", - "description": "GluPredKit aims to make blood glucose model training and prediction more accessible. ", - "topics": [ - "glucose-prediction", - "deep-learning", - "machine-learning", - "modelling-biological-systems" - ] + "uid": "github/palaeoware/revosim", + "url": "https://github.com/palaeoware/revosim", + "rel": "/software/repository/github/palaeoware/revosim", + "avatar": "https://avatars.githubusercontent.com/u/38782482?v=4", + "description": "REvoSim - The [R]apid [Evo]lutionary [Sim]ulator - An individual-based evolutionary model", + "topics": [] }, { - "uid": "github/ArisTr/PyRaTE", - "url": "https://github.com/ArisTr/PyRaTE", - "rel": "/software/repository/github/ArisTr/PyRaTE", - "avatar": "https://avatars.githubusercontent.com/u/25152725?v=4", - "description": "Python Radiative Transfer Emission Code", + "uid": "github/CisnerosResearch/LICHEM", + "url": "https://github.com/CisnerosResearch/LICHEM", + "rel": "/software/repository/github/CisnerosResearch/LICHEM", + "avatar": "https://avatars.githubusercontent.com/u/43679387?v=4", + "description": "This package is an open-source (GPLv3) interface between QM and MM software so that QM/MM calculations can be performed with polarizable and frozen electron density force fields. Functionality is also present for standard point-charge based force fields, pure MM, and pure QM calculations.", "topics": [] }, { - "uid": "github/swiss-armed-forces/openburst", - "url": "https://github.com/Swiss-Armed-Forces/openburst", - "rel": "/software/repository/github/swiss-armed-forces/openburst", - "avatar": "https://avatars.githubusercontent.com/u/156803577?v=4", - "description": "Software framework for the development and testing of sensor coverage and real-time air target detection analysis.", + "uid": "github/ACEnglish/truvari", + "url": "https://github.com/ACEnglish/truvari", + "rel": "/software/repository/github/ACEnglish/truvari", + "avatar": "https://avatars.githubusercontent.com/u/2422579?v=4", + "description": "Structural variant toolkit for VCFs", "topics": [ - "air", - "coverage", - "pcl", - "pet", - "radar", - "surveillance" + "structural-variation", + "vcf", + "bioinformatics", + "data-science", + "genomics", + "vcf-comparison", + "annotation-tool", + "benchmark-scripts", + "sequencing-data", + "sv-merging" ] }, { - "uid": "github/prdm0/ropenblas", - "url": "https://github.com/prdm0/ropenblas", - "rel": "/software/repository/github/prdm0/ropenblas", - "avatar": "https://avatars.githubusercontent.com/u/4948384?v=4", - "description": "Package to link R language to OpenBLAS library", + "uid": "github/SJTU-CGM/ivTerm", + "url": "https://github.com/SJTU-CGM/ivTerm", + "rel": "/software/repository/github/SJTU-CGM/ivTerm", + "avatar": "https://avatars.githubusercontent.com/u/10217715?v=4", + "description": null, "topics": [] }, { - "uid": "github/cvbuchem/LavAtmos", - "url": "https://github.com/cvbuchem/LavAtmos", - "rel": "/software/repository/github/cvbuchem/LavAtmos", - "avatar": "https://avatars.githubusercontent.com/u/43961101?v=4", - "description": "This code performs gas-melt equilibrium calculations for a given temperature and melt composition.", + "uid": "github/kushaltirumala/WaldoInSky", + "url": "https://github.com/kushaltirumala/WaldoInSky", + "rel": "/software/repository/github/kushaltirumala/WaldoInSky", + "avatar": "https://avatars.githubusercontent.com/u/10688982?v=4", + "description": "Code Repository for `Where is Waldo (and his friends)? A comparison of anomaly detection algorithms for time-domain astronomy`", "topics": [] }, { - "uid": "github/b-pardi/BraTaDio", - "url": "https://github.com/b-pardi/BraTaDio", - "rel": "/software/repository/github/b-pardi/BraTaDio", - "avatar": "https://avatars.githubusercontent.com/u/72064522?v=4", - "description": "Python based computational for for analyzing quartz crystal microbalance with dissipation (QCM-D) experimental data", + "uid": "github/pkgw/pwkit", + "url": "https://github.com/pkgw/pwkit", + "rel": "/software/repository/github/pkgw/pwkit", + "avatar": "https://avatars.githubusercontent.com/u/59598?v=4", + "description": "Miscellaneous science/astronomy tools.", "topics": [] }, { - "uid": "github/BradyAJohnston/MolecularNodes", - "url": "https://github.com/BradyAJohnston/MolecularNodes", - "rel": "/software/repository/github/BradyAJohnston/MolecularNodes", - "avatar": "https://avatars.githubusercontent.com/u/36021261?v=4", - "description": "Toolbox for molecular animations in Blender, powered by Geometry Nodes.", + "uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", + "url": "https://github.com/rodoulak/desalsim", + "rel": "/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", + "avatar": "https://avatars.githubusercontent.com/u/150446818?v=4", + "description": "Techno-economic models for desalination and brine treatment technologies", "topics": [ - "blender", - "biochemistry", - "geometry-nodes", - "protein", - "protein-structure", - "protein-visualization", - "sciart", - "visualisation", - "structural-biology", - "blender-addon", - "protein-data-bank", - "molecule", - "proteins", - "pdb", - "molecular-modeling", - "molecular", - "molecular-graphics", - "molecular-dynamics" + "brine", + "desalination", + "resource-recovery", + "techno-economic-analysis" ] }, { - "uid": "github/max-little/GRAPL", - "url": "https://github.com/max-little/GRAPL", - "rel": "/software/repository/github/max-little/GRAPL", - "avatar": "https://avatars.githubusercontent.com/u/102555976?v=4", - "description": "GRAPL: A computational library for nonparametric structural causal modelling, analysis and inference", - "topics": [] - }, - { - "uid": "github/ictr/covid19-outbreak-simulator", - "url": "https://github.com/ictr/covid19-outbreak-simulator", - "rel": "/software/repository/github/ictr/covid19-outbreak-simulator", - "avatar": "https://avatars.githubusercontent.com/u/62562139?v=4", - "description": "Population-based Forward-time Simulator for the Outbreak of COVID-19", + "uid": "github/BU-hammerTeam/PyHammer", + "url": "https://github.com/BU-hammerTeam/PyHammer", + "rel": "/software/repository/github/BU-hammerTeam/PyHammer", + "avatar": "https://avatars.githubusercontent.com/u/21038240?v=4", + "description": "A Python Spectral Typing Suite", "topics": [ - "covid-19", - "simulation", - "quarantine", - "virus", - "outbreak", - "simulate-scenarios", - "population-model" + "spectral-types", + "metallicity", + "python", + "spectral-lines" ] }, { - "uid": "github/nawrockie/vadr", - "url": "https://github.com/ncbi/vadr", - "rel": "/software/repository/github/nawrockie/vadr", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation", + "uid": "github/llt1836/TE-HI-GCN", + "url": "https://github.com/llt1836/TE-HI-GCN", + "rel": "/software/repository/github/llt1836/TE-HI-GCN", + "avatar": "https://avatars.githubusercontent.com/u/71361327?v=4", + "description": null, "topics": [] }, { - "uid": "github/PyDL/cat-puma", - "url": "https://github.com/PyDL/cat-puma", - "rel": "/software/repository/github/PyDL/cat-puma", - "avatar": "https://avatars.githubusercontent.com/u/7454038?v=4", - "description": "CME Arrival Time Prediction Using Machine learning Algorithms", + "uid": "github/SNEWS2/snewpy", + "url": "https://github.com/SNEWS2/snewpy", + "rel": "/software/repository/github/SNEWS2/snewpy", + "avatar": "https://avatars.githubusercontent.com/u/56884608?v=4", + "description": "collection of models from the community in common format for use by the SNEWS teams", "topics": [] }, { - "uid": "github/girder/viime", - "url": "https://github.com/girder/viime", - "rel": "/software/repository/github/girder/viime", - "avatar": "https://avatars2.githubusercontent.com/u/5150517?v=4", - "description": null, + "uid": "github/beckrob/Photo-z-SQL", + "url": "https://github.com/beckrob/Photo-z-SQL", + "rel": "/software/repository/github/beckrob/Photo-z-SQL", + "avatar": "https://avatars.githubusercontent.com/u/10948917?v=4", + "description": "C# template-based photometric redshift estimation framework", "topics": [] }, { - "uid": "github/ComputationalPhysiology/simcardems", - "url": "https://github.com/ComputationalPhysiology/simcardems", - "rel": "/software/repository/github/ComputationalPhysiology/simcardems", - "avatar": "https://avatars.githubusercontent.com/u/48671306?v=4", - "description": "Simula Cardiac ElectroMechanics Solver", + "uid": "github/DKMS/hapl-o-Mat_WinBin", + "url": "https://github.com/DKMS/Hapl-o-Mat_WinBin", + "rel": "/software/repository/github/DKMS/hapl-o-Mat_WinBin", + "avatar": "https://avatars.githubusercontent.com/u/16760698?v=4", + "description": "Windows binary version of the Graphical User Interface to Hapl-o-Mat. Includes also a binary version of the command line interface.", "topics": [] }, { - "uid": "github/jakelever/civicmine", - "url": "https://github.com/jakelever/civicmine", - "rel": "/software/repository/github/jakelever/civicmine", - "avatar": "https://avatars0.githubusercontent.com/u/3662147?v=4", - "description": "Text mining cancer biomarkers for the CIVIC database", + "uid": "github/febos/SQUARNA", + "url": "https://github.com/febos/SQUARNA", + "rel": "/software/repository/github/febos/SQUARNA", + "avatar": "https://avatars.githubusercontent.com/u/1099991?v=4", + "description": "RNA secondary structure prediction tool", "topics": [ - "text-mining", - "cancer", - "bionlp", - "biomarkers", - "precision-medicine" + "bioinformatics", + "bioinformatics-tool", + "biological-data-analysis", + "biology", + "prediction", + "prediction-algorithm", + "rna", + "rna-secondary-structure", + "rna-secondary-structure-prediction", + "rna-structure", + "rna-structure-prediction", + "secondary-structure", + "secondary-structure-prediction", + "structural-biology", + "structure", + "structure-prediction", + "alignment", + "single-sequence", + "2d", + "pseudoknot" ] }, { - "uid": "github/PaulHancock/Aegean", - "url": "https://github.com/PaulHancock/Aegean", - "rel": "/software/repository/github/PaulHancock/Aegean", - "avatar": "https://avatars.githubusercontent.com/u/8219382?v=4", - "description": "The Aegean source finding program and associated tools", - "topics": [ - "astronomy-library", - "source-finding", - "python", - "cataloguer" - ] + "uid": "github/mayuresh159/starsense_algorithms", + "url": "https://github.com/mayuresh159/starsense_algorithms", + "rel": "/software/repository/github/mayuresh159/starsense_algorithms", + "avatar": "https://avatars.githubusercontent.com/u/5468582?v=4", + "description": "This is a software package for testing and performance evaluation of different star sensors. The algorithms used for calculating quaternions from star field images are : centroiding, geometric voting and QUEST algorithms. The physical parameters of a star sensor are parametrized and by changing these parameters various performance estimators like sky coverage, memory requirement, timing requirements etc can be estimated for the selected star sensor. ", + "topics": [] }, { - "uid": "github/PaulHancock/Robbie", - "url": "https://github.com/PaulHancock/Robbie", - "rel": "/software/repository/github/PaulHancock/Robbie", - "avatar": "https://avatars.githubusercontent.com/u/8219382?v=4", - "description": "Robbie: A batch processing work-flow for the detection of radio transients and variables", + "uid": "github/johannesulf/dsigma", + "url": "https://github.com/johannesulf/dsigma", + "rel": "/software/repository/github/johannesulf/dsigma", + "avatar": "https://avatars.githubusercontent.com/u/4167911?v=4", + "description": "A Galaxy-Galaxy Lensing Python Package", "topics": [] }, { - "uid": "github/hemantaph/gwsnr", - "url": "https://github.com/hemantaph/gwsnr", - "rel": "/software/repository/github/hemantaph/gwsnr", - "avatar": "https://avatars.githubusercontent.com/u/53345498?v=4", + "uid": "github/tobias-dv-lnu/s4rdm3x", + "url": "https://github.com/tobias-dv-lnu/s4rdm3x", + "rel": "/software/repository/github/tobias-dv-lnu/s4rdm3x", + "avatar": "https://avatars.githubusercontent.com/u/3469312?v=4", "description": null, - "topics": [] + "topics": [ + "java", + "clustering-algorithm", + "imgui", + "gnu-gplv3" + ] }, { - "uid": "github/hemantaph/ler", - "url": "https://github.com/hemantaph/ler", - "rel": "/software/repository/github/hemantaph/ler", - "avatar": "https://avatars.githubusercontent.com/u/53345498?v=4", - "description": "Gravitational waves lensing rate calculator", + "uid": "github/tdrobinson/coronagraph_noise", + "url": "https://github.com/tdrobinson/coronagraph_noise", + "rel": "/software/repository/github/tdrobinson/coronagraph_noise", + "avatar": "https://avatars.githubusercontent.com/u/17238828?v=4", + "description": "Coronagraph noise modeling routines", "topics": [] }, { - "uid": "github/standage/AEGeAn", - "url": "https://github.com/standage/AEGeAn", - "rel": "/software/repository/github/standage/AEGeAn", - "avatar": "https://avatars.githubusercontent.com/u/566823?v=4", - "description": "Integrated toolkit for analysis and evaluation of annotated genomes", + "uid": "github/calboo/Potential_Field_Calculator", + "url": "https://github.com/calboo/Potential_Field_Calculator", + "rel": "/software/repository/github/calboo/Potential_Field_Calculator", + "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", + "description": "A collection of codes for generating and visualising potential magnetic fields. If this numerical code is used, authors kindly request an acknowledgment via citation of paper https://www.aanda.org/articles/aa/full_html/2019/05/aa34684-18/aa34684-18.html", "topics": [] }, { - "uid": "github/fusk-kpu/StressResponseGenesAtlas", - "url": "https://github.com/fusk-kpu/StressResponseGenesAtlas", - "rel": "/software/repository/github/fusk-kpu/StressResponseGenesAtlas", - "avatar": "https://avatars.githubusercontent.com/u/125861730?v=4", - "description": null, + "uid": "github/calboo/TAWAS", + "url": "https://github.com/calboo/TAWAS", + "rel": "/software/repository/github/calboo/TAWAS", + "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", + "description": "TAWAS is an IDL script for solving the wave equation for torsional Alfv\u00e8n waves in a viscous plasma. The background magnetic field is axisymmetric and force-free with no azimuthal component and the plasma beta is assumed to be negligable. The solution is calculated using the analytical formula presented in https://academic.oup.com/mnras/article-abstract/510/2/1910/6449388?redirectedFrom=fulltext. ", "topics": [] }, { - "uid": "github/jGetMove/jGetMove", - "url": "https://github.com/jGetMove/jGetMove", - "rel": "/software/repository/github/jGetMove/jGetMove", - "avatar": "https://avatars.githubusercontent.com/u/25670842?v=4", - "description": "GetMove algorithm in java", - "topics": [ - "java", - "getmove", - "clustering-algorithm" - ] + "uid": "github/calboo/wigglewave", + "url": "https://github.com/calboo/Wigglewave", + "rel": "/software/repository/github/calboo/wigglewave", + "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", + "description": "Wigglewave is a FORTRAN code that uses an RK4 finite difference method to solve the linearised governing equations for Torsional Alfv\u00e9n Waves (TAWs) propagating in a plasma with negligible plasma beta and in a force-free axisymmetric magnetic field, with no azimuthal component, embedded in a high density divergent tube structure.", + "topics": [] }, { - "uid": "github/bowang-lab/scGPT", - "url": "https://github.com/bowang-lab/scGPT", - "rel": "/software/repository/github/bowang-lab/scGPT", - "avatar": "https://avatars.githubusercontent.com/u/50999261?v=4", - "description": "scGPT is a foundation model for Single-Cell Multi-omics using generative AI. scGPT can be optimized to achieve superior performance across diverse downstream applications such as cell type annotation, multi-batch integration, multi-omic integration, perturbation response prediction and gene network inference", + "uid": "github/NCAS-CMS/cfdm", + "url": "https://github.com/NCAS-CMS/cfdm", + "rel": "/software/repository/github/NCAS-CMS/cfdm", + "avatar": "https://avatars3.githubusercontent.com/u/31280705?v=4", + "description": "A Python reference implementation of the CF data model", "topics": [ - "foundation-model", - "gpt", - "single-cell" + "cf", + "metadata", + "python", + "netcdf", + "climate", + "forecasting", + "ocean", + "atmosphere", + "atmospheric-science" ] }, { - "uid": "github/mortonne/psifr", - "url": "https://github.com/mortonne/psifr", - "rel": "/software/repository/github/mortonne/psifr", - "avatar": "https://avatars3.githubusercontent.com/u/9086777?v=4", - "description": "Psifr: Analysis and visualization of free recall data", + "uid": "github/popgenmethods/smcpp", + "url": "https://github.com/popgenmethods/smcpp", + "rel": "/software/repository/github/popgenmethods/smcpp", + "avatar": "https://avatars.githubusercontent.com/u/12285311?v=4", + "description": "SMC++ infers population history from whole-genome sequence data.", "topics": [] }, { - "uid": "github/lsncibb/microbiomeGWAS", - "url": "https://github.com/lsncibb/microbiomeGWAS", - "rel": "/software/repository/github/lsncibb/microbiomeGWAS", - "avatar": "https://avatars.githubusercontent.com/u/15255156?v=4", + "uid": "github/pyBRAvo/pyBRAvo", + "url": "https://github.com/pyBRAvo/pyBRAvo", + "rel": "/software/repository/github/pyBRAvo/pyBRAvo", + "avatar": "https://avatars3.githubusercontent.com/u/71509894?v=4", "description": null, "topics": [] }, { - "uid": "github/SynthSys/pyOmeroUpload", - "url": "https://github.com/SynthSys/pyOmeroUpload", - "rel": "/software/repository/github/SynthSys/pyOmeroUpload", - "avatar": "https://avatars.githubusercontent.com/u/13380219?v=4", - "description": "Project for uploading local file structure into OMERO database", - "topics": [] + "uid": "github/linuxscout/pyarabic", + "url": "https://github.com/linuxscout/pyarabic", + "rel": "/software/repository/github/linuxscout/pyarabic", + "avatar": "https://avatars.githubusercontent.com/u/450792?v=4", + "description": "pyarabic", + "topics": [ + "nlp-library", + "arabic-language", + "text-processing" + ] }, { - "uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", - "url": "https://github.com/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", - "rel": "/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", - "avatar": "https://avatars.githubusercontent.com/u/103255610?v=4", - "description": null, + "uid": "github/gheald/rmclean", + "url": "https://github.com/gheald/rmclean", + "rel": "/software/repository/github/gheald/rmclean", + "avatar": "https://avatars.githubusercontent.com/u/12065292?v=4", + "description": "RM-CLEAN for miriad", "topics": [] }, { - "uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", - "url": "https://github.com/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", - "rel": "/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", - "avatar": "https://avatars.githubusercontent.com/u/103255610?v=4", - "description": null, + "uid": "github/alexander-shen/rtest", + "url": "https://github.com/alexander-shen/rtest", + "rel": "/software/repository/github/alexander-shen/rtest", + "avatar": "https://avatars.githubusercontent.com/u/17458053?v=4", + "description": "Robust tests of randomness adapted from different sources", "topics": [] }, { - "uid": "github/bonsai-team/Porechop_ABI", - "url": "https://github.com/bonsai-team/Porechop_ABI", - "rel": "/software/repository/github/bonsai-team/Porechop_ABI", - "avatar": "https://avatars.githubusercontent.com/u/24830634?v=4", - "description": "Adapter trimmer for Oxford Nanopore reads using ab initio method", + "uid": "github/gadomski/antimeridian", + "url": "https://github.com/gadomski/antimeridian", + "rel": "/software/repository/github/gadomski/antimeridian", + "avatar": "https://avatars.githubusercontent.com/u/58314?v=4", + "description": "Correct GeoJSON geometries that cross the 180th meridian", + "topics": [ + "antimeridian", + "geojson", + "python", + "geospatial" + ] + }, + { + "uid": "github/ParisAstronomicalDataCentre/OPUS", + "url": "https://github.com/ParisAstronomicalDataCentre/OPUS", + "rel": "/software/repository/github/ParisAstronomicalDataCentre/OPUS", + "avatar": "https://avatars.githubusercontent.com/u/18441663?v=4", + "description": "Observatoire de Paris UWS System (OPUS): UWS web client/server developped at the Paris Astronomical Data Centre.", "topics": [] }, { - "uid": "github/bonsai-team/matam", - "url": "https://github.com/bonsai-team/matam", - "rel": "/software/repository/github/bonsai-team/matam", - "avatar": "https://avatars.githubusercontent.com/u/24830634?v=4", - "description": "Mapping-Assisted Targeted-Assembly for Metagenomics", - "topics": [ - "metagenomics", - "assembly", - "bioinformatics", - "rrna" - ] + "uid": "github/francescodc87/ipaPy2", + "url": "https://github.com/francescodc87/ipaPy2", + "rel": "/software/repository/github/francescodc87/ipaPy2", + "avatar": "https://avatars.githubusercontent.com/u/16557692?v=4", + "description": "New Python implementation of the Integrated Probabilistic Annotation (IPA) - A Bayesian annotation method for LC/MS data integrating biochemical relations, isotope patterns and adduct formation", + "topics": [] }, { - "uid": "github/pytoolz/toolz", - "url": "https://github.com/pytoolz/toolz", - "rel": "/software/repository/github/pytoolz/toolz", - "avatar": "https://avatars.githubusercontent.com/u/5448828?v=4", - "description": "A functional standard library for Python.", + "uid": "github/Johannes-Sahlmann/pygacs", + "url": "https://github.com/Johannes-Sahlmann/pygacs", + "rel": "/software/repository/github/Johannes-Sahlmann/pygacs", + "avatar": "https://avatars.githubusercontent.com/u/13909167?v=4", + "description": "Toolkit to manipulate Gaia catalogue tables hosted at ESAC archive.", "topics": [] }, { - "uid": "github/HuttleyLab/DiverseSeq", - "url": "https://github.com/HuttleyLab/DiverseSeq", - "rel": "/software/repository/github/HuttleyLab/DiverseSeq", - "avatar": "https://avatars.githubusercontent.com/u/54967899?v=4", - "description": "Tools for analysis of sequence divergence", - "topics": [ - "bioinformatics", - "phylogenetics" - ] + "uid": "github/jgducoin/galclaim", + "url": "https://github.com/jgducoin/galclaim", + "rel": "/software/repository/github/jgducoin/galclaim", + "avatar": "https://avatars.githubusercontent.com/u/44273935?v=4", + "description": "GALaxy Chance of Local Alignment algorIthM", + "topics": [] }, { - "uid": "github/HuttleyLab/scitrack", - "url": "https://github.com/HuttleyLab/scitrack", - "rel": "/software/repository/github/HuttleyLab/scitrack", - "avatar": "https://avatars.githubusercontent.com/u/54967899?v=4", - "description": "library aimed at scientists who want a simple tool to help log research computations", + "uid": "github/JanCBrammer/biopeaks", + "url": "https://github.com/JanCBrammer/biopeaks", + "rel": "/software/repository/github/JanCBrammer/biopeaks", + "avatar": "https://avatars0.githubusercontent.com/u/30125107?v=4", + "description": "biopeaks: a graphical user interface for feature extraction from heart- and breathing biosignals", "topics": [ - "logging-library", - "reproducible-research", - "science" + "biosignals", + "bitalino", + "opensignals", + "ecg", + "breathing", + "signal-analysis", + "python", + "gui", + "heart", + "peak-detection", + "heart-rate", + "breathing-rate", + "edf", + "electrophysiology", + "ppg" ] }, { - "uid": "github/DrJCarson/BoundedCoalescent", - "url": "https://github.com/DrJCarson/BoundedCoalescent", - "rel": "/software/repository/github/DrJCarson/BoundedCoalescent", - "avatar": "https://avatars.githubusercontent.com/u/9008332?v=4", - "description": "Sampling and likelihood estimation for the bounded coalescent", + "uid": "github/coljac/sensie", + "url": "https://github.com/coljac/sensie", + "rel": "/software/repository/github/coljac/sensie", + "avatar": "https://avatars3.githubusercontent.com/u/191407?v=4", + "description": "Toolset for probing the sensitivity of a deep neural network model to various properties of the data.", "topics": [] }, { - "uid": "github/huiwenke/MineProt", - "url": "https://github.com/huiwenke/MineProt", - "rel": "/software/repository/github/huiwenke/MineProt", - "avatar": "https://avatars.githubusercontent.com/u/43511097?v=4", - "description": "Modern application for custom protein curation", - "topics": [ - "alphafold", - "protein", - "server", - "colabfold", - "protein-structure" - ] - }, - { - "uid": "github/florpi/sunbird", - "url": "https://github.com/florpi/sunbird", - "rel": "/software/repository/github/florpi/sunbird", - "avatar": "https://avatars.githubusercontent.com/u/15879020?v=4", - "description": "COsmOlogical inference with dEnsity Split cluStering", + "uid": "github/nppackages/lpcde", + "url": "https://github.com/nppackages/lpcde", + "rel": "/software/repository/github/nppackages/lpcde", + "avatar": "https://avatars.githubusercontent.com/u/69351622?v=4", + "description": " R implementation of bandwidth selection, point estimation and inference procedures for local polynomial conditional distribution and density methods.", "topics": [] }, { - "uid": "github/callendeprieto/ferre", - "url": "https://github.com/callendeprieto/ferre", - "rel": "/software/repository/github/callendeprieto/ferre", - "avatar": "https://avatars.githubusercontent.com/u/24915449?v=4", - "description": "FERRE matches physical models to measurements", + "uid": "github/ivadomed/ivadomed", + "url": "https://github.com/ivadomed/ivadomed", + "rel": "/software/repository/github/ivadomed/ivadomed", + "avatar": "https://avatars.githubusercontent.com/u/67157284?v=4", + "description": "Repository on the collaborative IVADO medical imaging project between the Mila and NeuroPoly labs.", "topics": [] }, { - "uid": "github/wtraylor/modular_megafauna_model", - "url": "https://github.com/wtraylor/modular_megafauna_model", - "rel": "/software/repository/github/wtraylor/modular_megafauna_model", - "avatar": "https://avatars.githubusercontent.com/u/32058827?v=4", - "description": "Extendable, dynamic, process-based herbivore simulator that can be integrated into a dynamic vegetation model. Written as a C++ library.", + "uid": "github/spedas/pyspedas", + "url": "https://github.com/spedas/pyspedas", + "rel": "/software/repository/github/spedas/pyspedas", + "avatar": "https://avatars.githubusercontent.com/u/16089566?v=4", + "description": "Python-based Space Physics Environment Data Analysis Software", "topics": [ - "herbivores", - "dgvm", - "ecosystem-model", - "mammoth" + "space-physics", + "python", + "heliophysics", + "space", + "science-research" ] }, { - "uid": "github/caselawanalytics/CaseLawAnalytics", - "url": "https://github.com/caselawanalytics/CaseLawAnalytics", - "rel": "/software/repository/github/caselawanalytics/CaseLawAnalytics", - "avatar": "https://avatars1.githubusercontent.com/u/30318106?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/magnusmanske/snpomatic", - "url": "https://github.com/magnusmanske/snpomatic", - "rel": "/software/repository/github/magnusmanske/snpomatic", - "avatar": "https://avatars.githubusercontent.com/u/1406572?v=4", - "description": "fast, stringent short-read mapping software", - "topics": [] + "uid": "github/pyroll-project/pyroll-core", + "url": "https://github.com/pyroll-project/pyroll-core", + "rel": "/software/repository/github/pyroll-project/pyroll-core", + "avatar": "https://avatars.githubusercontent.com/u/100946430?v=4", + "description": "PyRoll rolling simulation framework - core library.", + "topics": [ + "groove-rolling", + "materials", + "metal-forming", + "pyroll", + "python", + "rolling", + "simulation" + ] }, { - "uid": "github/JCGoran/coffe", - "url": "https://github.com/JCGoran/coffe", - "rel": "/software/repository/github/JCGoran/coffe", - "avatar": "https://avatars.githubusercontent.com/u/25671271?v=4", - "description": "The public repository for the code COFFE", + "uid": "github/JamesPaynter/PyGRB", + "url": "https://github.com/JamesPaynter/PyGRB", + "rel": "/software/repository/github/JamesPaynter/PyGRB", + "avatar": "https://avatars2.githubusercontent.com/u/45152710?v=4", + "description": "Gamma-ray burst analysis library", "topics": [ - "cosmology", - "correlation-functions", - "galaxy-clustering", - "covariance-matrix" + "gamma-ray-burst", + "gamma-ray-astronomy", + "astrophysics" ] }, { - "uid": "github/fair-software/howfairis", - "url": "https://github.com/fair-software/howfairis", - "rel": "/software/repository/github/fair-software/howfairis", - "avatar": "https://avatars0.githubusercontent.com/u/48952865?v=4", - "description": "Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations", - "topics": [] + "uid": "github/spglib/spgrep", + "url": "https://github.com/spglib/spgrep", + "rel": "/software/repository/github/spglib/spgrep", + "avatar": "https://avatars.githubusercontent.com/u/64672219?v=4", + "description": "On-the-fly generator of space-group irreducible representations", + "topics": [ + "crystallography", + "group-theory", + "irreducible-representations", + "materials-science", + "python", + "representation-theory" + ] }, { - "uid": "github/fair-software/fairtally", - "url": "https://github.com/fair-software/fairtally", - "rel": "/software/repository/github/fair-software/fairtally", - "avatar": "https://avatars.githubusercontent.com/u/48952865?v=4", - "description": "Make a report based on howfairis results", - "topics": [] + "uid": "github/finsberg/fenicsx-beat", + "url": "https://github.com/finsberg/fenicsx-beat", + "rel": "/software/repository/github/finsberg/fenicsx-beat", + "avatar": "https://avatars.githubusercontent.com/u/2010323?v=4", + "description": null, + "topics": [ + "cardiac", + "ecg", + "electrophysiology", + "fenicsx", + "finite-element-analysis", + "monodomain-model" + ] }, { - "uid": "github/yupidevs/pactus", - "url": "https://github.com/yupidevs/pactus", - "rel": "/software/repository/github/yupidevs/pactus", - "avatar": "https://avatars.githubusercontent.com/u/79972700?v=4", - "description": "Framework to evaluate Trajectory Classification Algorithms", + "uid": "github/finsberg/gotranx", + "url": "https://github.com/finsberg/gotranx", + "rel": "/software/repository/github/finsberg/gotranx", + "avatar": "https://avatars.githubusercontent.com/u/2010323?v=4", + "description": "Next generation ODE translator", "topics": [ - "classification", - "classification-models", - "evaluation-framework", - "trajectory", - "trajectory-analysis", - "transformers", - "python" + "ode", + "parser", + "parsing", + "gotran", + "code-generation" ] }, { - "uid": "github/PACurran/MCSpearman", - "url": "https://github.com/PACurran/MCSpearman", - "rel": "/software/repository/github/PACurran/MCSpearman", - "avatar": "https://avatars.githubusercontent.com/u/9524144?v=4", - "description": "Monte Carlo error analyses of Spearman\u2019s rank test", + "uid": "github/statdivlab/rigr", + "url": "https://github.com/statdivlab/rigr", + "rel": "/software/repository/github/statdivlab/rigr", + "avatar": "https://avatars.githubusercontent.com/u/42418432?v=4", + "description": "Regression, Inference, and General Data Analysis Tools for R ", "topics": [] }, { - "uid": "github/JannisHoch/copro", - "url": "https://github.com/JannisHoch/copro", - "rel": "/software/repository/github/JannisHoch/copro", - "avatar": "https://avatars.githubusercontent.com/u/10956703?v=4", - "description": "(ML) model for computing conflict risk from climate, environmental, and societal drivers.", + "uid": "github/zizroc/villager", + "url": "https://github.com/zizroc/villager", + "rel": "/software/repository/github/zizroc/villager", + "avatar": "https://avatars.githubusercontent.com/u/38635903?v=4", + "description": "villager is an extensible agent based modeling (ABM) framework for the R language. It supports agents, agent aggregations and their associated resources, as well as flexible data management.", "topics": [ - "climate", - "conflict", - "risk", - "projection", - "security", - "environment" + "simulation", + "abm", + "agent-based-modeling" ] }, { - "uid": "github/WGS-TB/MentaLiST", - "url": "https://github.com/WGS-TB/MentaLiST", - "rel": "/software/repository/github/WGS-TB/MentaLiST", - "avatar": "https://avatars.githubusercontent.com/u/19986579?v=4", - "description": "The MLST pipeline developed by the PathOGiST research group", + "uid": "github/shenlab-sinai/ngsplot", + "url": "https://github.com/shenlab-sinai/ngsplot", + "rel": "/software/repository/github/shenlab-sinai/ngsplot", + "avatar": "https://avatars.githubusercontent.com/u/5775936?v=4", + "description": "Quick mining and visualization of NGS data by integrating genomic databases", "topics": [] }, { - "uid": "github/Valires/er-evaluation", - "url": "https://github.com/Valires/er-evaluation", - "rel": "/software/repository/github/Valires/er-evaluation", - "avatar": "https://avatars.githubusercontent.com/u/128562477?v=4", - "description": "An End-to-End Evaluation Framework for Entity Resolution Systems", - "topics": [ - "data-science", - "deduplication", - "disambiguation", - "duplicate-detection", - "entity-resolution", - "evaluation", - "fuzzy-matching", - "matching", - "ml-evaluation", - "ml-testing", - "record-linkage", - "statistics", - "inventor-name-disambiguation", - "author-name-disambiguation" - ] + "uid": "github/ddarriba/prottest3", + "url": "https://github.com/ddarriba/prottest3", + "rel": "/software/repository/github/ddarriba/prottest3", + "avatar": "https://avatars.githubusercontent.com/u/3135601?v=4", + "description": "Automatically exported from code.google.com/p/prottest3", + "topics": [] }, { - "uid": "github/JHayoz/CROCODILE", - "url": "https://github.com/JHayoz/CROCODILE", - "rel": "/software/repository/github/JHayoz/CROCODILE", - "avatar": "https://avatars.githubusercontent.com/u/77056052?v=4", - "description": null, + "uid": "github/awmann/M_-M_K-", + "url": "https://github.com/awmann/M_-M_K-", + "rel": "/software/repository/github/awmann/M_-M_K-", + "avatar": "https://avatars.githubusercontent.com/u/6567968?v=4", + "description": "Code for estimating realistic masses and uncertainties from M_Ks (2MASS Ks + distance)", "topics": [] }, { - "uid": "github/zgazak/TAP", - "url": "https://github.com/zgazak/TAP", - "rel": "/software/repository/github/zgazak/TAP", - "avatar": "https://avatars.githubusercontent.com/u/6148069?v=4", - "description": "Transit Analysis Package for IDL", + "uid": "github/18parkky/NanoMnT", + "url": "https://github.com/18parkky/NanoMnT", + "rel": "/software/repository/github/18parkky/NanoMnT", + "avatar": "https://avatars.githubusercontent.com/u/111036812?v=4", + "description": "Python package for analyzing STR from ONT data", "topics": [] }, { - "uid": "github/DotBots/qrkey", - "url": "https://github.com/DotBots/qrkey", - "rel": "/software/repository/github/DotBots/qrkey", - "avatar": "https://avatars.githubusercontent.com/u/80765534?v=4", - "description": "Simply and Securely Control Robots Swarms", + "uid": "github/hillerlab/GenomeAlignmentTools", + "url": "https://github.com/hillerlab/GenomeAlignmentTools", + "rel": "/software/repository/github/hillerlab/GenomeAlignmentTools", + "avatar": "https://avatars0.githubusercontent.com/u/8512188?v=4", + "description": "Tools for improving the sensitivity and specificity of genome alignments", "topics": [] }, { - "uid": "github/JuliaPlots/Makie.jl", - "url": "https://github.com/JuliaPlots/Makie.jl", - "rel": "/software/repository/github/JuliaPlots/Makie.jl", - "avatar": "https://avatars.githubusercontent.com/u/19197049?v=4", - "description": "High level plotting on the GPU.", + "uid": "github/lucianolorenti/ceruleo", + "url": "https://github.com/lucianolorenti/ceruleo", + "rel": "/software/repository/github/lucianolorenti/ceruleo", + "avatar": "https://avatars.githubusercontent.com/u/106397?v=4", + "description": "CeRULEo: Comprehensive utilitiEs for Remaining Useful Life Estimation methOds", "topics": [ - "julia", - "plotting", - "visualization", - "julia-language", - "gpu", - "graphics" + "predictive-maintenance", + "time-series", + "remaining-useful-life", + "remaining-useful-life-prediction" ] }, { - "uid": "github/vibbits/phyd3", - "url": "https://github.com/vibbits/phyd3", - "rel": "/software/repository/github/vibbits/phyd3", - "avatar": "https://avatars1.githubusercontent.com/u/22908438?v=4", - "description": "Phylogenetic tree viewer based on D3.js", + "uid": "github/EvolOMICS-TU/ETENLNC", + "url": "https://github.com/EvolOMICS-TU/ETENLNC", + "rel": "/software/repository/github/EvolOMICS-TU/ETENLNC", + "avatar": "https://avatars.githubusercontent.com/u/113347720?v=4", + "description": "ETENLNC (End-To-End-Novel-NonCoding) lncRNA identification and analysis framework", "topics": [] }, { - "uid": "github/axgoujon/convex_ridge_regularizers", - "url": "https://github.com/axgoujon/convex_ridge_regularizers", - "rel": "/software/repository/github/axgoujon/convex_ridge_regularizers", - "avatar": "https://avatars.githubusercontent.com/u/44649983?v=4", - "description": null, + "uid": "github/deephyper/deephyper", + "url": "https://github.com/deephyper/deephyper", + "rel": "/software/repository/github/deephyper/deephyper", + "avatar": "https://avatars.githubusercontent.com/u/44810957?v=4", + "description": "DeepHyper: Scalable Asynchronous Neural Architecture and Hyperparameter Search for Deep Neural Networks", + "topics": [ + "automl", + "scalability", + "neural-architecture-search", + "hyperparameter-optimization", + "python", + "tensorflow", + "keras", + "deep-learning", + "hpc", + "machine-learning", + "multi-fidelity", + "pytorch", + "uncertainty-quantification", + "mpi", + "raylib" + ] + }, + { + "uid": "github/conchoecia/pauvre", + "url": "https://github.com/conchoecia/pauvre", + "rel": "/software/repository/github/conchoecia/pauvre", + "avatar": "https://avatars.githubusercontent.com/u/3123273?v=4", + "description": "Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.", "topics": [] }, { - "uid": "github/mattyowl/astLib", - "url": "https://github.com/mattyowl/astLib", - "rel": "/software/repository/github/mattyowl/astLib", - "avatar": "https://avatars.githubusercontent.com/u/8531799?v=4", - "description": "A set of python modules for producing simple plots, statistics, common calculations, coordinate conversions, and manipulating FITS images with World Coordinate System (WCS) information.", + "uid": "github/franciscozorrilla/metaGEM", + "url": "https://github.com/franciscozorrilla/metaGEM", + "rel": "/software/repository/github/franciscozorrilla/metaGEM", + "avatar": "https://avatars.githubusercontent.com/u/35606471?v=4", + "description": ":gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data", "topics": [ - "astronomy-library" + "metagenomics", + "computational-biology", + "metabolic-models", + "gut-microbiome", + "snakemake", + "metagenome-assembled-genomes", + "mags", + "metabolism", + "bioinformatics", + "flux-balance-analysis", + "genome-scale-metabolic-model", + "metabolic-modeling", + "microbial-ecology", + "microbiome", + "systems-biology" ] }, { - "uid": "github/mattyowl/fitScalingRelation", - "url": "https://github.com/mattyowl/fitScalingRelation", - "rel": "/software/repository/github/mattyowl/fitScalingRelation", - "avatar": "https://avatars.githubusercontent.com/u/8531799?v=4", - "description": "Code for fitting galaxy cluster scaling relations using MCMC", + "uid": "github/mmollina/viewpoly", + "url": "https://github.com/mmollina/viewpoly", + "rel": "/software/repository/github/mmollina/viewpoly", + "avatar": "https://avatars.githubusercontent.com/u/318990?v=4", + "description": "R package to visualize genetic maps and QTL analysis.", "topics": [] }, { - "uid": "github/djones1040/PythonPhot", - "url": "https://github.com/djones1040/PythonPhot", - "rel": "/software/repository/github/djones1040/PythonPhot", - "avatar": "https://avatars.githubusercontent.com/u/1512537?v=4", - "description": "Simple DAOPHOT-type photometry in Python translated from IDL AstroLib photometry algorithms. Please email me with bugs, suggestions, omissions, etc. The code is citable as part of the Astrophysics Source Code Library (http://ascl.net/1501.010).", + "uid": "github/netsiphd/netrd", + "url": "https://github.com/netsiphd/netrd", + "rel": "/software/repository/github/netsiphd/netrd", + "avatar": "https://avatars.githubusercontent.com/u/46543375?v=4", + "description": "A library for network {reconstruction, distances, dynamics}", "topics": [] }, { - "uid": "github/alixlam/fmristroke", - "url": "https://github.com/alixlam/fmristroke", - "rel": "/software/repository/github/alixlam/fmristroke", - "avatar": "https://avatars.githubusercontent.com/u/60109304?v=4", - "description": "Adding quality checks and confounds computation steps to fmriprep for stroke data.", + "uid": "github/sciapp/sampledb", + "url": "https://github.com/sciapp/sampledb", + "rel": "/software/repository/github/sciapp/sampledb", + "avatar": "https://avatars.githubusercontent.com/u/9656894?v=4", + "description": "Sample and Measurement Metadata Database", "topics": [] }, { - "uid": "github/faircloth-lab/phyluce", - "url": "https://github.com/faircloth-lab/phyluce", - "rel": "/software/repository/github/faircloth-lab/phyluce", - "avatar": "https://avatars.githubusercontent.com/u/1105384?v=4", - "description": "software for UCE (and general) phylogenomics", + "uid": "github/genome/bam-readcount", + "url": "https://github.com/genome/bam-readcount", + "rel": "/software/repository/github/genome/bam-readcount", + "avatar": "https://avatars.githubusercontent.com/u/318108?v=4", + "description": "Count bases in BAM/CRAM files", "topics": [] }, { - "uid": "github/henrikmelin/h3ppy", - "url": "https://github.com/henrikmelin/h3ppy", - "rel": "/software/repository/github/henrikmelin/h3ppy", - "avatar": "https://avatars.githubusercontent.com/u/345794?v=4", - "description": "A python package for modelling and fitting H3+ spectra", + "uid": "github/genome/somatic-sniper", + "url": "https://github.com/genome/somatic-sniper", + "rel": "/software/repository/github/genome/somatic-sniper", + "avatar": "https://avatars.githubusercontent.com/u/318108?v=4", + "description": "A tool to call somatic single nucleotide variants.", + "topics": [] + }, + { + "uid": "github/jtschindler/sculptor", + "url": "https://github.com/jtschindler/sculptor", + "rel": "/software/repository/github/jtschindler/sculptor", + "avatar": "https://avatars.githubusercontent.com/u/16090889?v=4", + "description": "Sculptor - Interactive modeling of (electromagnetic) astronomical spectra.", "topics": [ + "lmfit", + "gui", + "sculptor", "astronomy", - "data-analysis", - "planetary-science", - "python3", + "astrophysics", "spectroscopy" ] }, { - "uid": "github/cmelab/flowerMD", - "url": "https://github.com/cmelab/flowerMD", - "rel": "/software/repository/github/cmelab/flowerMD", - "avatar": "https://avatars.githubusercontent.com/u/44783842?v=4", - "description": "Flexible Library of Organic Workflows and Extensible Recipes for Molecular Dynamics.", + "uid": "github/stevertaylor/gw_pta_emulator", + "url": "https://github.com/stevertaylor/gw_pta_emulator", + "rel": "/software/repository/github/stevertaylor/gw_pta_emulator", + "avatar": "https://avatars.githubusercontent.com/u/5446644?v=4", + "description": "A notebook and data associated with the paper Taylor, Simon, Sampson (2017)", + "topics": [] + }, + { + "uid": "github/kokkos/kokkos-fft", + "url": "https://github.com/kokkos/kokkos-fft", + "rel": "/software/repository/github/kokkos/kokkos-fft", + "avatar": "https://avatars.githubusercontent.com/u/10199860?v=4", + "description": "A shared-memory FFT for the Kokkos ecosystem", "topics": [ - "hoomd-blue", - "molecular-dynamics", - "molecular-dynamics-simulation", - "mosdef-hub", - "polymer", - "simulation" + "fft", + "fft-library", + "kokkos" ] }, { - "uid": "github/hnikaein/stark", - "url": "https://github.com/hnikaein/stark", - "rel": "/software/repository/github/hnikaein/stark", - "avatar": "https://avatars.githubusercontent.com/u/3269519?v=4", - "description": "A tool for bluntifying a bidirected de bruijn graph by removing overlaps.", + "uid": "github/j-erler/pymf", + "url": "https://github.com/j-erler/pymf", + "rel": "/software/repository/github/j-erler/pymf", + "avatar": "https://avatars.githubusercontent.com/u/35317736?v=4", + "description": "A python implementation of several matched filtering techniques for astronomical images.", "topics": [] }, { - "uid": "github/nanoporetech/index.html#", - "url": null, - "rel": "/software/repository/github/nanoporetech/index.html#", - "avatar": "", - "description": "a suite of tools primarily for the identification of modified nucleotides from nanopore sequencing data.", + "uid": "github/CFSAN-Biostatistics/SeroTools", + "url": "https://github.com/CFSAN-Biostatistics/SeroTools", + "rel": "/software/repository/github/CFSAN-Biostatistics/SeroTools", + "avatar": "https://avatars2.githubusercontent.com/u/7605009?v=4", + "description": "A toolkit and repository for the White-Kauffmann-Le Minor scheme for Salmonella serotyping.", "topics": [] }, { - "uid": "github/nanoporetech/pychopper", - "url": "https://github.com/nanoporetech/pychopper", - "rel": "/software/repository/github/nanoporetech/pychopper", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "A tool to identify, orient, trim and rescue full length cDNA reads", + "uid": "github/jordanlab/STing", + "url": "https://github.com/jordanlab/STing", + "rel": "/software/repository/github/jordanlab/STing", + "avatar": "https://avatars2.githubusercontent.com/u/22896069?v=4", + "description": "Ultrafast sequence typing and gene detection from NGS raw reads", "topics": [ - "rna-seq", - "cdna", - "transcriptomics", - "nanopore", - "full-length" + "mlst", + "cgmlst", + "kmer", + "cpp", + "genomics", + "computational-biology", + "ngs", + "ngs-analysis", + "genes", + "databases", + "dna" ] }, { - "uid": "github/nanoporetech/tombo", - "url": "https://github.com/nanoporetech/tombo", - "rel": "/software/repository/github/nanoporetech/tombo", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data. ", + "uid": "github/JorenSix/Panako", + "url": "https://github.com/JorenSix/Panako", + "rel": "/software/repository/github/JorenSix/Panako", + "avatar": "https://avatars.githubusercontent.com/u/60453?v=4", + "description": "The Panako acoustic fingerprinting system.", "topics": [ - "epigenetics" + "music-information-retrieval", + "acoustic-fingerprinting", + "duplicate-detection", + "audio-processing" ] }, { - "uid": "github/nanoporetech/pinfish", - "url": "https://github.com/nanoporetech/pinfish", - "rel": "/software/repository/github/nanoporetech/pinfish", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Tools to annotate genomes using long read transcriptomics data", + "uid": "github/JorenSix/Olaf", + "url": "https://github.com/JorenSix/Olaf", + "rel": "/software/repository/github/JorenSix/Olaf", + "avatar": "https://avatars.githubusercontent.com/u/60453?v=4", + "description": "Olaf: Overly Lightweight Acoustic Fingerprinting is a portable acoustic fingerprinting system.", "topics": [ - "rna-seq", - "cdna", - "transcriptomics", - "genome-annotation", - "nanopore" + "music-information-retrieval", + "audio-fingerprinting", + "acoustic-fingerprinting", + "wasm", + "esp32" ] }, { - "uid": "github/nanoporetech/scrappie", - "url": "https://github.com/nanoporetech/scrappie", - "rel": "/software/repository/github/nanoporetech/scrappie", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group", - "topics": [] - }, - { - "uid": "github/nanoporetech/flappie", - "url": "https://github.com/nanoporetech/flappie", - "rel": "/software/repository/github/nanoporetech/flappie", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Flip-flop basecaller for Oxford Nanopore reads", + "uid": "github/msyazwanfaid/hilalimagingdataextraction", + "url": "https://github.com/msyazwanfaid/hilalimagingdataextraction", + "rel": "/software/repository/github/msyazwanfaid/hilalimagingdataextraction", + "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", + "description": "Code to detect the availability of lunar crescent from image", "topics": [] }, { - "uid": "github/nanoporetech/ont_fast5_api", - "url": "https://github.com/nanoporetech/ont_fast5_api", - "rel": "/software/repository/github/nanoporetech/ont_fast5_api", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Oxford Nanopore Technologies fast5 API software", + "uid": "github/msyazwanfaid/hilalpy", + "url": "https://github.com/msyazwanfaid/hilalpy", + "rel": "/software/repository/github/msyazwanfaid/hilalpy", + "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", + "description": "A package to analyse the data of Moon sighting for lunar crescent visibility criterion", "topics": [] }, { - "uid": "github/nanoporetech/qcat", - "url": "https://github.com/nanoporetech/qcat", - "rel": "/software/repository/github/nanoporetech/qcat", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": " qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.", + "uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", + "url": "https://github.com/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", + "rel": "/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", + "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", + "description": "Authentication Algorithm for New Moon Visibility Report", "topics": [] }, { - "uid": "github/nanoporetech/dorado", - "url": "https://github.com/nanoporetech/dorado", - "rel": "/software/repository/github/nanoporetech/dorado", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Oxford Nanopore's Basecaller", + "uid": "github/bokeh/bokeh", + "url": "https://github.com/bokeh/bokeh", + "rel": "/software/repository/github/bokeh/bokeh", + "avatar": "https://avatars2.githubusercontent.com/u/8440965?v=4", + "description": "Interactive Data Visualization in the browser, from Python", "topics": [ - "basecalling", - "libtorch", - "nanopore", - "genomics" + "bokeh", + "python", + "interactive-plots", + "javascript", + "visualization", + "plotting", + "plots", + "data-visualisation", + "notebooks", + "jupyter", + "visualisation", + "numfocus" ] }, { - "uid": "github/nanoporetech/medaka", - "url": "https://github.com/nanoporetech/medaka", - "rel": "/software/repository/github/nanoporetech/medaka", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Sequence correction provided by ONT Research", + "uid": "github/sefffal/Octofitter.jl", + "url": "https://github.com/sefffal/Octofitter.jl", + "rel": "/software/repository/github/sefffal/Octofitter.jl", + "avatar": "https://avatars.githubusercontent.com/u/7330605?v=4", + "description": "Octofitter is a Julia package for performing Bayesian inference against a wide variety of exoplanet and binary star data.", "topics": [ - "nanopore", - "medaka" + "julia" ] }, { - "uid": "github/nanoporetech/megalodon", - "url": "https://github.com/nanoporetech/megalodon", - "rel": "/software/repository/github/nanoporetech/megalodon", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": " Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.", + "uid": "github/saberyoung/haffet", + "url": "https://github.com/saberyoung/HAFFET", + "rel": "/software/repository/github/saberyoung/haffet", + "avatar": "https://avatars.githubusercontent.com/u/7788642?v=4", + "description": "Repository to analyze SN photometric and spectroscopic data", + "topics": [] + }, + { + "uid": "github/arielmission-space/PAOS", + "url": "https://github.com/arielmission-space/PAOS", + "rel": "/software/repository/github/arielmission-space/PAOS", + "avatar": "https://avatars.githubusercontent.com/u/72981825?v=4", + "description": "PAOS is a fast, modern, and reliable Python package for Physical Optics studies.", "topics": [ - "basecalling", - "epigenetics", - "variant-calling", - "guppy" + "fresnel", + "gui", + "open-source", + "optics", + "optics-simulation", + "paos", + "psf", + "python", + "ray-tracing", + "wavefront" ] }, { - "uid": "github/nanoporetech/pomoxis", - "url": "https://github.com/nanoporetech/pomoxis", - "rel": "/software/repository/github/nanoporetech/pomoxis", - "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", - "description": "Analysis components from Oxford Nanopore Research", + "uid": "github/arielmission-space/ExoSim2-public", + "url": "https://github.com/arielmission-space/ExoSim2-public", + "rel": "/software/repository/github/arielmission-space/ExoSim2-public", + "avatar": "https://avatars.githubusercontent.com/u/72981825?v=4", + "description": "ExoSim 2 is the next generation of the Exoplanet Observation Simulator (ExoSim) tailored for spectro-photometric observations of transiting exoplanets from space, ground, and sub-orbital platforms. This software is a complete rewrite implemented in Python 3, embracing object-oriented design principles.", "topics": [] }, { - "uid": "github/ejeschke/ginga", - "url": "https://github.com/ejeschke/ginga", - "rel": "/software/repository/github/ejeschke/ginga", - "avatar": "https://avatars.githubusercontent.com/u/1305473?v=4", - "description": "The Ginga astronomical FITS file viewer", + "uid": "github/IslasGECI/nerd", + "url": "https://github.com/IslasGECI/nerd", + "rel": "/software/repository/github/IslasGECI/nerd", + "avatar": "https://avatars.githubusercontent.com/u/40274821?v=4", + "description": "NERD: Numerical Estimation of Rodenticide Density", "topics": [] }, { - "uid": "github/Mihart-web/CARBONETTE", - "url": "https://github.com/Mihart-web/CARBONETTE", - "rel": "/software/repository/github/Mihart-web/CARBONETTE", - "avatar": "https://avatars.githubusercontent.com/u/80395512?v=4", - "description": "CARBONETTE PIPELINE \u2014 INTERPRETATION GUIDE", + "uid": "github/agerada/AIgarMIC", + "url": "https://github.com/agerada/AIgarMIC", + "rel": "/software/repository/github/agerada/AIgarMIC", + "avatar": "https://avatars.githubusercontent.com/u/62601884?v=4", + "description": "AIgarMIC \u2013\u00a0machine-learning assisted agar dilution software", + "topics": [] + }, + { + "uid": "github/JuliaDiff/ForwardDiff.jl", + "url": "https://github.com/JuliaDiff/ForwardDiff.jl", + "rel": "/software/repository/github/JuliaDiff/ForwardDiff.jl", + "avatar": "https://avatars.githubusercontent.com/u/7750915?v=4", + "description": "Forward Mode Automatic Differentiation for Julia", "topics": [ - "cnt", - "engine", - "hnt", - "spectral-analysis", - "spectral-data", - "spectral-methods" + "julia", + "calculus", + "automatic-differentiation" ] }, { - "uid": "github/qpv-research-group/solcore5", - "url": "https://github.com/qpv-research-group/solcore5", - "rel": "/software/repository/github/qpv-research-group/solcore5", - "avatar": "https://avatars0.githubusercontent.com/u/48552948?v=4", - "description": "A multi-scale, python-based library for the modelling of solar cells and semiconductor materials", + "uid": "github/JuliaDiff/ReverseDiff.jl", + "url": "https://github.com/JuliaDiff/ReverseDiff.jl", + "rel": "/software/repository/github/JuliaDiff/ReverseDiff.jl", + "avatar": "https://avatars.githubusercontent.com/u/7750915?v=4", + "description": "Reverse Mode Automatic Differentiation for Julia", "topics": [ - "photovoltaic", - "semiconductor", - "solar-cells", - "python" + "julia", + "calculus", + "automatic-differentiation" ] }, { - "uid": "github/alexdobin/STAR", - "url": "https://github.com/alexdobin/STAR", - "rel": "/software/repository/github/alexdobin/STAR", - "avatar": "https://avatars.githubusercontent.com/u/6960419?v=4", - "description": "RNA-seq aligner", + "uid": "github/Incpink-Liu/DNA-storage-R_plus", + "url": "https://github.com/Incpink-Liu/DNA-storage-R_plus", + "rel": "/software/repository/github/Incpink-Liu/DNA-storage-R_plus", + "avatar": "https://avatars.githubusercontent.com/u/96714586?v=4", + "description": null, "topics": [] }, { - "uid": "github/Yu-Group/simChef", - "url": "https://github.com/Yu-Group/simChef", - "rel": "/software/repository/github/Yu-Group/simChef", - "avatar": "https://avatars.githubusercontent.com/u/26810483?v=4", - "description": "An R package to facilitate PCS simulation studies.", + "uid": "github/lskatz/SneakerNet", + "url": "https://github.com/lskatz/SneakerNet", + "rel": "/software/repository/github/lskatz/SneakerNet", + "avatar": "https://avatars.githubusercontent.com/u/14798?v=4", + "description": ":feet: QA/QC pipeline for a MiSeq/HiSeq/Ion Torrent/assembly-only run", "topics": [] }, { - "uid": "github/Yu-Group/veridical-flow", - "url": "https://github.com/Yu-Group/veridical-flow", - "rel": "/software/repository/github/Yu-Group/veridical-flow", - "avatar": "https://avatars.githubusercontent.com/u/26810483?v=4", - "description": "Making it easier to build stable, trustworthy data-science pipelines.", + "uid": "github/lskatz/fasten", + "url": "https://github.com/lskatz/fasten", + "rel": "/software/repository/github/lskatz/fasten", + "avatar": "https://avatars.githubusercontent.com/u/14798?v=4", + "description": ":construction_worker: Fasten toolkit, for streaming operations on fastq files", "topics": [ - "machine-learning", - "python3", - "data-science", - "workflow", - "stability", - "ml", - "ai", - "statistics", - "pandas", - "preprocessing", - "ensembling", - "tutorial" + "bioinformatics", + "fastq-files", + "rust" ] }, { - "uid": "github/pavolgaj/OCFit", - "url": "https://github.com/pavolgaj/OCFit", - "rel": "/software/repository/github/pavolgaj/OCFit", - "avatar": "https://avatars.githubusercontent.com/u/17177193?v=4", - "description": "Python package for fitting of O-C diagrams.", - "topics": [ - "python", - "astronomy", - "fitting-algorithm" - ] + "uid": "github/dentalfloss1/transients-simulations", + "url": "https://github.com/dentalfloss1/transients-simulations", + "rel": "/software/repository/github/dentalfloss1/transients-simulations", + "avatar": "https://avatars.githubusercontent.com/u/24629883?v=4", + "description": null, + "topics": [] }, { - "uid": "github/pavolgaj/ObsPlanner", - "url": "https://github.com/pavolgaj/ObsPlanner", - "rel": "/software/repository/github/pavolgaj/ObsPlanner", - "avatar": "https://avatars.githubusercontent.com/u/17177193?v=4", - "description": "Simple program for planning and managing astronomical observations", - "topics": [ - "astronomy", - "observation" - ] + "uid": "github/aliojjati/MGCAMB", + "url": "https://github.com/aliojjati/MGCAMB", + "rel": "/software/repository/github/aliojjati/MGCAMB", + "avatar": "https://avatars.githubusercontent.com/u/11789226?v=4", + "description": "Repo for MGCAMB", + "topics": [] }, { - "uid": "github/CisnerosResearch/LICHEM", - "url": "https://github.com/CisnerosResearch/LICHEM", - "rel": "/software/repository/github/CisnerosResearch/LICHEM", - "avatar": "https://avatars.githubusercontent.com/u/43679387?v=4", - "description": "This package is an open-source (GPLv3) interface between QM and MM software so that QM/MM calculations can be performed with polarizable and frozen electron density force fields. Functionality is also present for standard point-charge based force fields, pure MM, and pure QM calculations.", + "uid": "github/miguelzuma/hi_class_public", + "url": "https://github.com/miguelzuma/hi_class_public", + "rel": "/software/repository/github/miguelzuma/hi_class_public", + "avatar": "https://avatars.githubusercontent.com/u/5014027?v=4", + "description": "Public version of Horndeski in the Cosmic Linear Anisotropy Solving System", "topics": [] }, { - "uid": "github/nonlocalmodels/NLMech", - "url": "https://github.com/nonlocalmodels/NLMech", - "rel": "/software/repository/github/nonlocalmodels/NLMech", - "avatar": "https://avatars.githubusercontent.com/u/52047777?v=4", - "description": "Implementation of finite element and finite difference approximation of Nonlocal models", + "uid": "github/cnes/EleFits", + "url": "https://github.com/CNES/EleFits", + "rel": "/software/repository/github/cnes/EleFits", + "avatar": "https://avatars.githubusercontent.com/u/30655936?v=4", + "description": "A modern C++ API on top of CFitsIO", "topics": [ - "computational-mechanics", - "peridynamics", - "fracture", - "nonlocalmodels" + "actively-maintained", + "fits-files", + "fitsio", + "cpp" ] }, { - "uid": "github/maickrau/MBG", - "url": "https://github.com/maickrau/MBG", - "rel": "/software/repository/github/maickrau/MBG", - "avatar": "https://avatars.githubusercontent.com/u/1543674?v=4", - "description": "Minimizer based sparse de Bruijn graph constructor.", + "uid": "github/pmvreeswijk/BlackBOX", + "url": "https://github.com/pmvreeswijk/BlackBOX", + "rel": "/software/repository/github/pmvreeswijk/BlackBOX", + "avatar": "https://avatars.githubusercontent.com/u/19797964?v=4", + "description": "image processing sofware specifically for the reduction of BlackGEM and MeerLICHT images", "topics": [] }, { - "uid": "github/maickrau/GraphAligner", - "url": "https://github.com/maickrau/GraphAligner", - "rel": "/software/repository/github/maickrau/GraphAligner", - "avatar": "https://avatars.githubusercontent.com/u/1543674?v=4", - "description": "Sequence to graph aligner for long reads", + "uid": "github/pmvreeswijk/ZOGY", + "url": "https://github.com/pmvreeswijk/ZOGY", + "rel": "/software/repository/github/pmvreeswijk/ZOGY", + "avatar": "https://avatars.githubusercontent.com/u/19797964?v=4", + "description": "a Python implementation of proper image subtraction (Zackay, Ofek & Gal-Yam 2016, ApJ, 830, 27)", "topics": [] }, { - "uid": "github/TeamCOMPAS/COMPAS", - "url": "https://github.com/TeamCOMPAS/COMPAS", - "rel": "/software/repository/github/TeamCOMPAS/COMPAS", - "avatar": "https://avatars.githubusercontent.com/u/22152683?v=4", - "description": "COMPAS rapid binary population synthesis code", - "topics": [] + "uid": "github/aneeshnaik/lintsampler", + "url": "https://github.com/aneeshnaik/lintsampler", + "rel": "/software/repository/github/aneeshnaik/lintsampler", + "avatar": "https://avatars.githubusercontent.com/u/48957123?v=4", + "description": "Efficient random sampling via linear interpolation.", + "topics": [ + "numpy", + "python", + "random-generation", + "statistics", + "random-sampling", + "low-discrepancy-sequence" + ] }, { - "uid": "github/seamusclarke/rjplots", - "url": "https://github.com/SeamusClarke/RJplots", - "rel": "/software/repository/github/seamusclarke/rjplots", - "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", - "description": "A Python package allowing for the automated and objective classification of 2D structures using a moments of inertia based method. This method is a further development of J-plots (https://github.com/SJaffa/Jplots)", + "uid": "github/aneeshnaik/spam", + "url": "https://github.com/aneeshnaik/spam", + "rel": "/software/repository/github/aneeshnaik/spam", + "avatar": "https://avatars.githubusercontent.com/u/48957123?v=4", + "description": "spam is a Python 3 package, used to search for imprints of Hu-Sawicki f(R) gravity in the rotation curves of the SPARC sample.", "topics": [] }, { - "uid": "github/cbirdferrer/collatrix", - "url": "https://github.com/cbirdferrer/collatrix", - "rel": "/software/repository/github/cbirdferrer/collatrix", - "avatar": "https://avatars1.githubusercontent.com/u/30982700?v=4", - "description": "this tool collates the outputs of the MorphoMetriX photogrammetry tool", + "uid": "github/GalagaBits/JWST-FGS-Spelunker", + "url": "https://github.com/GalagaBits/JWST-FGS-Spelunker", + "rel": "/software/repository/github/GalagaBits/JWST-FGS-Spelunker", + "avatar": "https://avatars.githubusercontent.com/u/34511693?v=4", + "description": "JWST FGS Spelunker is a package that assists and finds technical anomalies from the JWST and stellar properties from guidestars.", "topics": [ - "length-measurement", - "altitude-calibration", - "body-volume", - "whales", - "photogrammetry", - "gui-application", - "pyqt5" + "fgs", + "guidestar", + "jwst" ] }, { - "uid": "github/fakedrtom/oncogemini", - "url": "https://github.com/fakedrtom/oncogemini", - "rel": "/software/repository/github/fakedrtom/oncogemini", - "avatar": "https://avatars.githubusercontent.com/u/27868365?v=4", - "description": null, - "topics": [] + "uid": "github/ekiefl/pooltool", + "url": "https://github.com/ekiefl/pooltool", + "rel": "/software/repository/github/ekiefl/pooltool", + "avatar": "https://avatars.githubusercontent.com/u/8688665?v=4", + "description": "A sandbox billiards game that emphasizes realistic physics", + "topics": [ + "billiards", + "panda3d", + "physics", + "pool", + "python", + "snooker", + "simulation", + "eight-ball" + ] }, { - "uid": "github/StingraySoftware/stingray", - "url": "https://github.com/StingraySoftware/stingray", - "rel": "/software/repository/github/StingraySoftware/stingray", - "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", - "description": "Anything can happen in the next half hour (including spectral timing made easy)!", + "uid": "github/zhouzilu/DENDRO", + "url": "https://github.com/zhouzilu/DENDRO", + "rel": "/software/repository/github/zhouzilu/DENDRO", + "avatar": "https://avatars.githubusercontent.com/u/26659843?v=4", + "description": "Genetic Heterogeneity Profiling by Single Cell RNA Sequencing ", "topics": [ - "x-ray", - "astronomy", - "blackhole", - "pulsars", - "timeseries", - "astrophysics", - "fourier-analysis", - "fourier-transform", - "time-series", - "time-series-analysis", - "x-ray-binaries", - "neutronstars", - "data-analysis", - "blackholes" + "single-cell", + "tumor-heterogeneity", + "statistics", + "computational-biology", + "bioinformatics" ] }, { - "uid": "github/StingraySoftware/HENDRICS", - "url": "https://github.com/StingraySoftware/HENDRICS", - "rel": "/software/repository/github/StingraySoftware/HENDRICS", - "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", - "description": "Shell scripts for spectral-timing analysis of X-ray astronomical data.", - "topics": [] + "uid": "github/dynamicslab/pysindy", + "url": "https://github.com/dynamicslab/pysindy", + "rel": "/software/repository/github/dynamicslab/pysindy", + "avatar": "https://avatars.githubusercontent.com/u/59835780?v=4", + "description": "A package for the sparse identification of nonlinear dynamical systems from data", + "topics": [ + "dynamical-systems", + "machine-learning", + "sparse-regression", + "model-discovery", + "system-identification", + "nonlinear-dynamics" + ] }, { - "uid": "github/eisascience/HISTA", - "url": "https://github.com/eisascience/HISTA", - "rel": "/software/repository/github/eisascience/HISTA", - "avatar": "https://avatars.githubusercontent.com/u/26265575?v=4", - "description": "Human Infertility Single-cell Testis Atlas", + "uid": "github/EHTJulia/ScatteringOptics.jl", + "url": "https://github.com/EHTJulia/ScatteringOptics.jl", + "rel": "/software/repository/github/EHTJulia/ScatteringOptics.jl", + "avatar": "https://avatars.githubusercontent.com/u/102935150?v=4", + "description": "A Julia package to simulate and model interstellar scattering in strong regime.", "topics": [] }, { - "uid": "github/olivares-j/Kalkayotl", - "url": "https://github.com/olivares-j/Kalkayotl", - "rel": "/software/repository/github/olivares-j/Kalkayotl", - "avatar": "https://avatars.githubusercontent.com/u/7568214?v=4", - "description": "This repository contains a code to infer distances to stellar clusters and its stars from Gaia parallaxes.", - "topics": [ - "parallaxer", - "infer-distances" - ] + "uid": "github/dlinssen/sunbather", + "url": "https://github.com/dlinssen/sunbather", + "rel": "/software/repository/github/dlinssen/sunbather", + "avatar": "https://avatars.githubusercontent.com/u/126874901?v=4", + "description": "Python/Cloudy package for simulating escaping exoplanet atmospheres and their transit spectra.", + "topics": [] }, { - "uid": "github/andyphilips/dynamac", - "url": "https://github.com/andyphilips/dynamac", - "rel": "/software/repository/github/andyphilips/dynamac", - "avatar": "https://avatars3.githubusercontent.com/u/15617347?v=4", - "description": "Dynamic simulation and testing for single-equation ARDL models, available for both R and Stata", + "uid": "github/mjoppich/bioGUItools", + "url": "https://github.com/mjoppich/bioGUItools", + "rel": "/software/repository/github/mjoppich/bioGUItools", + "avatar": "https://avatars0.githubusercontent.com/u/1136125?v=4", + "description": "Tools for bioGUI (e.g. CWL Parser/argparse2biogui/...)", "topics": [] }, { - "uid": "github/JacobBumgarner/VesselVio", - "url": "https://github.com/JacobBumgarner/VesselVio", - "rel": "/software/repository/github/JacobBumgarner/VesselVio", - "avatar": "https://avatars.githubusercontent.com/u/70919881?v=4", - "description": "VesselVio is an open-source application for the analysis and visualization of segmented vasculature datasets", - "topics": [ - "open-source", - "visualization", - "analysis" - ] + "uid": "github/nrao/UniPOPS", + "url": "https://github.com/nrao/UniPOPS", + "rel": "/software/repository/github/nrao/UniPOPS", + "avatar": "https://avatars.githubusercontent.com/u/305020?v=4", + "description": "Archive of final NRAO UniPOPS source code distribution (version 3.5)", + "topics": [] }, { - "uid": "github/simonehagey/orbdot", - "url": "https://github.com/simonehagey/orbdot", - "rel": "/software/repository/github/simonehagey/orbdot", - "avatar": "https://avatars.githubusercontent.com/u/71101756?v=4", - "description": "A Python package for studying secular evolution of exoplanet orbits using observational data.", - "topics": [ - "exoplanet-transits", - "exoplanets", - "exoplanet-radial-velocities", - "model-fitting", - "nested-sampling", - "orbital-evolution" - ] + "uid": "github/astroweaver/the_farmer", + "url": "https://github.com/astroweaver/the_farmer", + "rel": "/software/repository/github/astroweaver/the_farmer", + "avatar": "https://avatars.githubusercontent.com/u/39458378?v=4", + "description": "The Farmer", + "topics": [] }, { - "uid": "github/pencil-code/pencil-code", - "url": "https://github.com/pencil-code/pencil-code", - "rel": "/software/repository/github/pencil-code/pencil-code", - "avatar": "https://avatars.githubusercontent.com/u/11549701?v=4", - "description": "A high-order finite-difference code for compressible hydrodynamic flows with magnetic fields and particles", + "uid": "github/Bahler-Lab/pyphe", + "url": "https://github.com/Bahler-Lab/pyphe", + "rel": "/software/repository/github/Bahler-Lab/pyphe", + "avatar": "https://avatars.githubusercontent.com/u/15102975?v=4", + "description": "Python toolbox for phenotype analysis of arrayed microbial colonies", "topics": [] }, { - "uid": "github/vatlab/sos-notebook", - "url": "https://github.com/vatlab/sos-notebook", - "rel": "/software/repository/github/vatlab/sos-notebook", - "avatar": "https://avatars.githubusercontent.com/u/20074389?v=4", - "description": "Multi-language Jupyter Notebook", - "topics": [ - "jupyter-kernels" - ] + "uid": "github/IMMM-SFA/tell", + "url": "https://github.com/IMMM-SFA/tell", + "rel": "/software/repository/github/IMMM-SFA/tell", + "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", + "description": "A model to predict Total ELectricity Loads (TELL)", + "topics": [] }, { - "uid": "github/ECP-copa/Cabana", - "url": "https://github.com/ECP-copa/Cabana", - "rel": "/software/repository/github/ECP-copa/Cabana", - "avatar": "https://avatars.githubusercontent.com/u/24921631?v=4", - "description": "Performance-portable library for particle-based simulations", - "topics": [ - "particles", - "exascale-computing", - "exascale", - "kokkos", - "co-design" - ] + "uid": "github/IMMM-SFA/mosartwmpy", + "url": "https://github.com/IMMM-SFA/mosartwmpy", + "rel": "/software/repository/github/IMMM-SFA/mosartwmpy", + "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", + "description": "Python translation of MOSART-WM: a water routing and management model", + "topics": [] }, { - "uid": "github/MayaWaves/mayawaves", - "url": "https://github.com/MayaWaves/mayawaves", - "rel": "/software/repository/github/MayaWaves/mayawaves", - "avatar": "https://avatars.githubusercontent.com/u/75278294?v=4", - "description": null, + "uid": "github/IMMM-SFA/gamut", + "url": "https://github.com/IMMM-SFA/gamut", + "rel": "/software/repository/github/IMMM-SFA/gamut", + "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", + "description": "An R package to identify multi-sector teleconnection complexity", "topics": [] }, { - "uid": "github/brocklab/pycashier", - "url": "https://github.com/brocklab/pycashier", - "rel": "/software/repository/github/brocklab/pycashier", - "avatar": "https://avatars.githubusercontent.com/u/41652738?v=4", - "description": "cash in on DNA barcode tags", - "topics": [ - "bioinformatics", - "pipeline" - ] + "uid": "github/IMMM-SFA/naturf", + "url": "https://github.com/IMMM-SFA/naturf", + "rel": "/software/repository/github/IMMM-SFA/naturf", + "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", + "description": "NATURF: Neighborhood Adaptive Tissues for Urban Resilience Futures", + "topics": [] }, { - "uid": "github/guynir42/radon", - "url": "https://github.com/guynir42/radon", - "rel": "/software/repository/github/guynir42/radon", - "avatar": "https://avatars.githubusercontent.com/u/37179063?v=4", - "description": "Streak detection using the Fast Radon Transform", + "uid": "github/IMMM-SFA/statemodify", + "url": "https://github.com/IMMM-SFA/statemodify", + "rel": "/software/repository/github/IMMM-SFA/statemodify", + "avatar": "https://avatars.githubusercontent.com/u/31457237?v=4", + "description": "A package to modify StateMod's input and output files for exploratory modeling", "topics": [] }, { - "uid": "github/Starlink/hds-v5", - "url": "https://github.com/Starlink/hds-v5", - "rel": "/software/repository/github/Starlink/hds-v5", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "HDS API implemented using HDF5", + "uid": "github/TomKellyGenetics/graphsim", + "url": "https://github.com/TomKellyGenetics/graphsim", + "rel": "/software/repository/github/TomKellyGenetics/graphsim", + "avatar": "https://avatars1.githubusercontent.com/u/5493325?v=4", + "description": "R package: Simulate Expression data from igraph network using mvtnorm (multivariate normal).", "topics": [ - "astronomy", - "file-format", - "c" + "r-stats", + "igraph-networks", + "simulated-data", + "graph-algorithms", + "package", + "joss", + "genetics", + "gene-expression", + "gene-regulatory-networks", + "benchmarking", + "simulation-modeling", + "genomics", + "genomic-data-analysis", + "ngs-analysis" ] }, { - "uid": "github/Starlink/perl-Starlink-Autoastrom", - "url": "https://github.com/Starlink/perl-Starlink-Autoastrom", - "rel": "/software/repository/github/Starlink/perl-Starlink-Autoastrom", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Starlink Auto astrometry software", + "uid": "github/DrafProject/elmada", + "url": "https://github.com/DrafProject/elmada", + "rel": "/software/repository/github/DrafProject/elmada", + "avatar": "https://avatars.githubusercontent.com/u/62054152?v=4", + "description": "elmada: Dynamic electricity carbon emission factors and prices for Europe", "topics": [ - "perl", - "astronomy", - "wcs" + "carbon-emissions", + "electricity-prices", + "electricity-market", + "demand-response", + "energy-system-modeling", + "python", + "marginal-emissions" ] }, { - "uid": "github/Starlink/ORAC-DR", - "url": "https://github.com/Starlink/ORAC-DR", - "rel": "/software/repository/github/Starlink/ORAC-DR", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "The ORAC-DR astronomy data reduction pipeline", - "topics": [ - "perl", - "orac-dr", - "pipeline-framework", - "astronomy" - ] + "uid": "github/vibbits/phyd3", + "url": "https://github.com/vibbits/phyd3", + "rel": "/software/repository/github/vibbits/phyd3", + "avatar": "https://avatars1.githubusercontent.com/u/22908438?v=4", + "description": "Phylogenetic tree viewer based on D3.js", + "topics": [] }, { - "uid": "github/Starlink/starlink", - "url": "https://github.com/Starlink/starlink", - "rel": "/software/repository/github/Starlink/starlink", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Starlink Software Collection", - "topics": [ - "astronomy" - ] + "uid": "github/michalychforever/CLASS-PT", + "url": "https://github.com/Michalychforever/CLASS-PT", + "rel": "/software/repository/github/michalychforever/CLASS-PT", + "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", + "description": "Nonlinear perturbation theory extension of the Boltzmann code CLASS", + "topics": [] }, { - "uid": "github/Starlink/starjava", - "url": "https://github.com/Starlink/starjava", - "rel": "/software/repository/github/Starlink/starjava", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Java applications initially developed for the Starlink Project but now developed independently", + "uid": "github/spectralcode/OCTproZ", + "url": "https://github.com/spectralcode/OCTproZ", + "rel": "/software/repository/github/spectralcode/OCTproZ", + "avatar": "https://avatars2.githubusercontent.com/u/51879191?v=4", + "description": "OCTproZ is an open source software for optical coherence tomography processing and visualization.", "topics": [ - "java", - "astronomy" + "optical-coherence-tomography", + "oct", + "optics", + "medical-image-processing", + "gpu-processing", + "dsp", + "mhz-oct", + "qt", + "cuda", + "visualization" ] }, { - "uid": "github/Starlink/aspic", - "url": "https://github.com/Starlink/aspic", - "rel": "/software/repository/github/Starlink/aspic", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Starlink Image processing programs from the 1980s", - "topics": [ - "astronomy", - "fortran" - ] + "uid": "github/dstndstn/astrometry.net", + "url": "https://github.com/dstndstn/astrometry.net", + "rel": "/software/repository/github/dstndstn/astrometry.net", + "avatar": "https://avatars.githubusercontent.com/u/1065981?v=4", + "description": "Astrometry.net -- automatic recognition of astronomical images", + "topics": [] }, { - "uid": "github/Starlink/palpy", - "url": "https://github.com/Starlink/palpy", - "rel": "/software/repository/github/Starlink/palpy", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Python interface to the PAL positional astronomy library", - "topics": [ - "python", - "astronomy", - "wcs" - ] + "uid": "github/dstndstn/tractor", + "url": "https://github.com/dstndstn/tractor", + "rel": "/software/repository/github/dstndstn/tractor", + "avatar": "https://avatars.githubusercontent.com/u/1065981?v=4", + "description": "The Tractor: measuring astronomical sources via probabilistic inference", + "topics": [] }, { - "uid": "github/Starlink/pal", - "url": "https://github.com/Starlink/pal", - "rel": "/software/repository/github/Starlink/pal", - "avatar": "https://avatars.githubusercontent.com/u/2018671?v=4", - "description": "Positional Astronomy Library", + "uid": "github/AstroAccelerateOrg/astro-accelerate", + "url": "https://github.com/AstroAccelerateOrg/astro-accelerate", + "rel": "/software/repository/github/AstroAccelerateOrg/astro-accelerate", + "avatar": "https://avatars.githubusercontent.com/u/25104377?v=4", + "description": "AstroAccelerate is a many-core accelerated software package for processing time-domain radio-astronomy data.", "topics": [ - "astronomy", - "c", - "wcs" + "gpu", + "cuda", + "radio-astronomy" ] }, { - "uid": "github/lime-rt/lime", - "url": "https://github.com/lime-rt/lime", - "rel": "/software/repository/github/lime-rt/lime", - "avatar": "https://avatars.githubusercontent.com/u/12966606?v=4", - "description": "Line Modeling Engine", - "topics": [] + "uid": "github/difuture-lmu/dsBinVal", + "url": "https://github.com/difuture-lmu/dsBinVal", + "rel": "/software/repository/github/difuture-lmu/dsBinVal", + "avatar": "https://avatars.githubusercontent.com/u/82653878?v=4", + "description": "ROC-GLM and calibration analysis for DataSHIELD", + "topics": [ + "auc", + "calibration", + "datashield", + "distributed-computing", + "roc" + ] }, { - "uid": "github/PixelgenTechnologies/pixelator", - "url": "https://github.com/PixelgenTechnologies/pixelator", - "rel": "/software/repository/github/PixelgenTechnologies/pixelator", - "avatar": "https://avatars.githubusercontent.com/u/73003367?v=4", - "description": "A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.", + "uid": "github/manodeep/Corrfunc", + "url": "https://github.com/manodeep/Corrfunc", + "rel": "/software/repository/github/manodeep/Corrfunc", + "avatar": "https://avatars.githubusercontent.com/u/3004941?v=4", + "description": "\u26a1\ufe0f\u26a1\ufe0f\u26a1\ufe0fBlazing fast correlation functions on the CPU.", "topics": [ - "molecular-pixelation", - "pixelgen-technologies", - "protein", - "proteomics", - "single-cell", - "single-cell-omics", - "spatial" + "astrophysics", + "galaxies", + "cosmology", + "large-scale-structure", + "pair-counting", + "intrinsics", + "python", + "c", + "openmp", + "simd", + "avx512", + "avx2", + "avx", + "sse42", + "correlation-functions" ] }, { - "uid": "github/mwess/GreedyFHist", - "url": "https://github.com/mwess/GreedyFHist", - "rel": "/software/repository/github/mwess/GreedyFHist", - "avatar": "https://avatars.githubusercontent.com/u/9482649?v=4", - "description": "Registration of stained histology.", + "uid": "github/manodeep/TesseRACt", + "url": "https://github.com/manodeep/TesseRACt", + "rel": "/software/repository/github/manodeep/TesseRACt", + "avatar": "https://avatars.githubusercontent.com/u/3004941?v=4", + "description": null, "topics": [] }, { - "uid": "github/mwess/miit", - "url": "https://github.com/mwess/miit", - "rel": "/software/repository/github/mwess/miit", - "avatar": "https://avatars.githubusercontent.com/u/9482649?v=4", - "description": "Repository for the Multi-omics Imaging Integration Toolset.", + "uid": "github/cb-ge/ephor_wp4_agnostic_models", + "url": "https://github.com/cb-ge/ephor_wp4_agnostic_models", + "rel": "/software/repository/github/cb-ge/ephor_wp4_agnostic_models", + "avatar": "https://avatars.githubusercontent.com/u/79517349?v=4", + "description": null, "topics": [] }, { - "uid": "github/leonzheng2/butterfly", - "url": "https://github.com/leonzheng2/butterfly", - "rel": "/software/repository/github/leonzheng2/butterfly", - "avatar": "https://avatars.githubusercontent.com/u/40190509?v=4", - "description": null, + "uid": "github/KIT-MBS/pyREX", + "url": "https://github.com/KIT-MBS/pyrexMD", + "rel": "/software/repository/github/KIT-MBS/pyREX", + "avatar": "https://avatars.githubusercontent.com/u/28391071?v=4", + "description": "Workflow-orientated python package for Replica Exchange Molecular Dynamics", "topics": [] }, { - "uid": "github/leonzheng2/efficient-butterfly", - "url": "https://github.com/leonzheng2/efficient-butterfly", - "rel": "/software/repository/github/leonzheng2/efficient-butterfly", - "avatar": "https://avatars.githubusercontent.com/u/40190509?v=4", - "description": "Code for reproducible research - Efficient identification of butterfly sparse matrix factorizations", + "uid": "github/dnarayanan/powderday", + "url": "https://github.com/dnarayanan/powderday", + "rel": "/software/repository/github/dnarayanan/powderday", + "avatar": "https://avatars.githubusercontent.com/u/4460891?v=4", + "description": "powderday dust radiative transfer", "topics": [] }, { - "uid": "github/R-Computing-Lab/ggpedigree", - "url": "https://github.com/R-Computing-Lab/ggpedigree", - "rel": "/software/repository/github/R-Computing-Lab/ggpedigree", - "avatar": "https://avatars.githubusercontent.com/u/70174445?v=4", - "description": "Graphing pedigrees and family trees with ggplot2", + "uid": "github/seclark/RHT", + "url": "https://github.com/seclark/RHT", + "rel": "/software/repository/github/seclark/RHT", + "avatar": "https://avatars.githubusercontent.com/u/3051331?v=4", + "description": "The Rolling Hough Transform", "topics": [] }, { - "uid": "github/fchuffar/protopackage", - "url": "https://github.com/fchuffar/protopackage", - "rel": "/software/repository/github/fchuffar/protopackage", - "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", + "uid": "github/FarnazFouladi/HashSeq_Manuscript", + "url": "https://github.com/FarnazFouladi/HashSeq_Manuscript", + "rel": "/software/repository/github/FarnazFouladi/HashSeq_Manuscript", + "avatar": "https://avatars.githubusercontent.com/u/33106787?v=4", "description": null, "topics": [] }, { - "uid": "github/fchuffar/epimedtools", - "url": "https://github.com/fchuffar/epimedtools", - "rel": "/software/repository/github/fchuffar/epimedtools", - "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", - "description": "A package allowing multi-omics analysis using R", + "uid": "github/Samreay/Barry", + "url": "https://github.com/Samreay/Barry", + "rel": "/software/repository/github/Samreay/Barry", + "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", + "description": "BAO Model Fitting Made Easy", "topics": [] }, { - "uid": "github/fchuffar/dmethr", - "url": "https://github.com/fchuffar/dmethr", - "rel": "/software/repository/github/fchuffar/dmethr", - "avatar": "https://avatars.githubusercontent.com/u/13216225?v=4", - "description": "DNA Methylation repression of transcriptional activity", + "uid": "github/Samreay/ChainConsumer", + "url": "https://github.com/Samreay/ChainConsumer", + "rel": "/software/repository/github/Samreay/ChainConsumer", + "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", + "description": "Corner plots, LaTeX tables and plotting walks.", "topics": [] }, { - "uid": "github/psi4/psi4", - "url": "https://github.com/psi4/psi4", - "rel": "/software/repository/github/psi4/psi4", - "avatar": "https://avatars.githubusercontent.com/u/2636883?v=4", - "description": "Open-Source Quantum Chemistry \u2013 an electronic structure package in C++ driven by Python", - "topics": [ - "quantum-chemistry", - "c-plus-plus", - "python", - "computational-chemistry", - "chemistry", - "physics" - ] - }, - { - "uid": "github/Jammy2211/PyAutoLens", - "url": "https://github.com/Jammy2211/PyAutoLens", - "rel": "/software/repository/github/Jammy2211/PyAutoLens", - "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", - "description": "PyAutoLens: Open Source Strong Gravitational Lensing", - "topics": [ - "astronomy", - "gravitational-lensing", - "lens-modeling", - "cosmology", - "galaxy", - "gravitational-lenses", - "astrophysics", - "physics", - "image-processing", - "image", - "python" - ] + "uid": "github/Samreay/Marz", + "url": "https://github.com/Samreay/Marz", + "rel": "/software/repository/github/Samreay/Marz", + "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", + "description": "The Marz redshifting program is intended for use in cosmology surveys, specifically for the OzDES team.", + "topics": [] }, { - "uid": "github/Jammy2211/PyAutoCTI", - "url": "https://github.com/Jammy2211/PyAutoCTI", - "rel": "/software/repository/github/Jammy2211/PyAutoCTI", - "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", - "description": "PyAutoCTI: Charge Transfer Inefficiency Calibration", + "uid": "github/genner-lab/meta-fish-lib", + "url": "https://github.com/genner-lab/meta-fish-lib", + "rel": "/software/repository/github/genner-lab/meta-fish-lib", + "avatar": "https://avatars.githubusercontent.com/u/74772033?v=4", + "description": "A generalised, dynamic DNA reference library for metabarcoding of fishes", "topics": [] }, { - "uid": "github/Jammy2211/PyAutoGalaxy", - "url": "https://github.com/Jammy2211/PyAutoGalaxy", - "rel": "/software/repository/github/Jammy2211/PyAutoGalaxy", - "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", - "description": "PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology", + "uid": "github/ExoJulia/ExoplanetsSysSim.jl", + "url": "https://github.com/ExoJulia/ExoplanetsSysSim.jl", + "rel": "/software/repository/github/ExoJulia/ExoplanetsSysSim.jl", + "avatar": "https://avatars.githubusercontent.com/u/46846999?v=4", + "description": "Exoplanet System Simulation: core files", "topics": [] }, { - "uid": "github/atfrank/PyShifts", - "url": "https://github.com/atfrank/PyShifts", - "rel": "/software/repository/github/atfrank/PyShifts", - "avatar": "https://avatars.githubusercontent.com/u/5891136?v=4", - "description": "Pyshifts: A Pymol Plugin for Chemical Shift-Based Analysis of Biomolecular Ensembles", - "topics": [ - "chemical-shift", - "pymol-plugin", - "pymol", - "error-analysis" - ] + "uid": "github/ExoJulia/SysSimExClusters", + "url": "https://github.com/ExoJulia/SysSimExClusters", + "rel": "/software/repository/github/ExoJulia/SysSimExClusters", + "avatar": "https://avatars.githubusercontent.com/u/46846999?v=4", + "description": "Example of Clustered Planetary System Model for SysSim", + "topics": [] }, { - "uid": "github/evanoconnor/GR1D", - "url": "https://github.com/evanoconnor/GR1D", - "rel": "/software/repository/github/evanoconnor/GR1D", - "avatar": "https://avatars.githubusercontent.com/u/1109332?v=4", - "description": "General Relativistic, Spherically Symmetry, Neutrino Transport Code for Stellar Collapse", + "uid": "github/Rhyd-Lewis/GCol", + "url": "https://github.com/Rhyd-Lewis/GCol", + "rel": "/software/repository/github/Rhyd-Lewis/GCol", + "avatar": "https://avatars.githubusercontent.com/u/163303122?v=4", + "description": "A Python library for graph coloring", "topics": [] }, { - "uid": "github/fairdataihub/SPARClink", - "url": "https://github.com/fairdataihub/SPARClink", - "rel": "/software/repository/github/fairdataihub/SPARClink", - "avatar": "https://avatars.githubusercontent.com/u/90935916?v=4", - "description": "SPARClink: Visualizing the Impact of SPARC", - "topics": [ - "visualization", - "nlp", - "machine-learning", - "hackathon", - "citations", - "topic-modeling", - "fair", - "d3js", - "keyword-extraction", - "python" - ] + "uid": "github/barbarabodinier/fake", + "url": "https://github.com/barbarabodinier/fake", + "rel": "/software/repository/github/barbarabodinier/fake", + "avatar": "https://avatars.githubusercontent.com/u/25798013?v=4", + "description": "R package fake (Flexible Data Simulation Using The Multivariate Normal Distribution).", + "topics": [] }, { - "uid": "github/creanero/locus", - "url": "https://github.com/creanero/locus", - "rel": "/software/repository/github/creanero/locus", - "avatar": "https://avatars.githubusercontent.com/u/10131613?v=4", - "description": "code and script for Locus Algorithm", + "uid": "github/vipinagrawal25/MeMC", + "url": "https://github.com/vipinagrawal25/MeMC", + "rel": "/software/repository/github/vipinagrawal25/MeMC", + "avatar": "https://avatars.githubusercontent.com/u/58880095?v=4", + "description": "The software mainly has three sections:", "topics": [] }, { - "uid": "github/DLTK/DLTK", - "url": "https://github.com/DLTK/DLTK", - "rel": "/software/repository/github/DLTK/DLTK", - "avatar": "https://avatars.githubusercontent.com/u/28306010?v=4", - "description": "Deep Learning Toolkit for Medical Image Analysis", + "uid": "github/ifilot/edp", + "url": "https://github.com/ifilot/edp", + "rel": "/software/repository/github/ifilot/edp", + "avatar": "https://avatars.githubusercontent.com/u/1659768?v=4", + "description": "Electron Density Plotter", "topics": [ - "deep-learning", - "machine-learning", - "neural-networks", - "tensorflow", - "medical-imaging", - "data-science", - "ml", - "deep-neural-networks", - "python", - "medical", - "dltk", - "dltk-model-zoo", - "neural-network", - "neuroimaging", - "cnn", - "medical-image-processing" + "electron-density", + "vasp", + "color-scheme", + "density", + "visualization" ] }, { - "uid": "github/sjforeman/bskit", - "url": "https://github.com/sjforeman/bskit", - "rel": "/software/repository/github/sjforeman/bskit", - "avatar": "https://avatars.githubusercontent.com/u/14794540?v=4", - "description": "Code for measuring bispectra from cosmological simulation snapshots", - "topics": [] - }, - { - "uid": "github/sjforeman/StringFast", - "url": "https://github.com/sjforeman/StringFast", - "rel": "/software/repository/github/sjforeman/StringFast", - "avatar": "https://avatars.githubusercontent.com/u/14794540?v=4", - "description": "A fast code to compute CMB power spectra induced by a network of cosmic strings", + "uid": "github/ChileanVirtualObservatory/indexing_utfsm", + "url": "https://github.com/ChileanVirtualObservatory/indexing_utfsm", + "rel": "/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", + "avatar": "https://avatars.githubusercontent.com/u/3382185?v=4", + "description": "R implementation of RoiSE algorithm", "topics": [] }, { - "uid": "github/carpyncho/carpyncho-py", - "url": "https://github.com/carpyncho/carpyncho-py", - "rel": "/software/repository/github/carpyncho/carpyncho-py", - "avatar": "https://avatars.githubusercontent.com/u/13108515?v=4", - "description": "Carpyncho client for python", + "uid": "github/JannisHoch/copro", + "url": "https://github.com/JannisHoch/copro", + "rel": "/software/repository/github/JannisHoch/copro", + "avatar": "https://avatars.githubusercontent.com/u/10956703?v=4", + "description": "(ML) model for computing conflict risk from climate, environmental, and societal drivers.", "topics": [ - "vvv", - "astronomy", - "catalog", - "lightcurves" + "climate", + "conflict", + "risk", + "projection", + "security", + "environment" ] }, { - "uid": "github/vavrines/Kinetic.jl", - "url": "https://github.com/vavrines/Kinetic.jl", - "rel": "/software/repository/github/vavrines/Kinetic.jl", - "avatar": "https://avatars.githubusercontent.com/u/21040679?v=4", - "description": "Universal modeling and simulation of fluid dynamics upon machine learning", - "topics": [ - "kinetic-theory", - "cfd", - "boltzmann-equation", - "gas-dynamics", - "plasma", - "finite-volume", - "advection-diffusion", - "pde", - "sciml", - "deep-learning", - "scientific-machine-learning", - "finite-element-methods" - ] + "uid": "github/VIB-PSB/MINI-EX", + "url": "https://github.com/VIB-PSB/MINI-EX", + "rel": "/software/repository/github/VIB-PSB/MINI-EX", + "avatar": "https://avatars.githubusercontent.com/u/23654185?v=4", + "description": "Motif-Informed Network Inference of cell type-specific gene regulatory networks in plants", + "topics": [] }, { - "uid": "github/IPESE/REHO", - "url": "https://github.com/IPESE/REHO", - "rel": "/software/repository/github/IPESE/REHO", - "avatar": "https://avatars.githubusercontent.com/u/150812261?v=4", - "description": "Decision Support Tool for Renewable Energy Communities", + "uid": "github/omuse-geoscience/omuse", + "url": "https://github.com/omuse-geoscience/omuse", + "rel": "/software/repository/github/omuse-geoscience/omuse", + "avatar": "https://avatars.githubusercontent.com/u/61740914?v=4", + "description": " The Oceanographic Multi-purpose Software Environment: a package for multi-physics and multi-scale earth science simulations.", "topics": [] }, { - "uid": "github/MartianColonist/POSEIDON", - "url": "https://github.com/MartianColonist/POSEIDON", - "rel": "/software/repository/github/MartianColonist/POSEIDON", - "avatar": "https://avatars.githubusercontent.com/u/22718554?v=4", - "description": "Multidimensional atmospheric retrieval of exoplanet spectra.", + "uid": "github/wathela/PyMerger", + "url": "https://github.com/wathela/PyMerger", + "rel": "/software/repository/github/wathela/PyMerger", + "avatar": "https://avatars.githubusercontent.com/u/20660576?v=4", + "description": null, "topics": [] }, { - "uid": "github/MartianColonist/Cthulhu", - "url": "https://github.com/MartianColonist/Cthulhu", - "rel": "/software/repository/github/MartianColonist/Cthulhu", - "avatar": "https://avatars.githubusercontent.com/u/22718554?v=4", - "description": "A Python package to calculate cross sections for substellar atmospheres", + "uid": "github/wathela/FIRST-CLASSIFIER", + "url": "https://github.com/wathela/FIRST-CLASSIFIER", + "rel": "/software/repository/github/wathela/FIRST-CLASSIFIER", + "avatar": "https://avatars.githubusercontent.com/u/20660576?v=4", + "description": "FIRST Classifier: Compact and Extended Radio Galaxies Classification using Deep Convolutional Neural Networks", "topics": [] }, { - "uid": "github/CIbiv/guaCAMOLE", - "url": "https://github.com/Cibiv/GuaCAMOLE", - "rel": "/software/repository/github/CIbiv/guaCAMOLE", - "avatar": "https://avatars.githubusercontent.com/u/2115077?v=4", - "description": "GuaCAMOLE (Guanosine Cytosine Aware Metagenomic Opulence Least squares Estimation) algorithm for the efficient detection and removal of GC bias from metagenomic samples", + "uid": "github/fbartolic/volcano", + "url": "https://github.com/fbartolic/volcano", + "rel": "/software/repository/github/fbartolic/volcano", + "avatar": "https://avatars.githubusercontent.com/u/18243408?v=4", + "description": "Mapping the surface of Jupiter's moon Io from one-dimensional time-series data.", "topics": [] }, { - "uid": "github/bhi-kimlab/StressGenePred", - "url": "https://github.com/bhi-kimlab/StressGenePred", - "rel": "/software/repository/github/bhi-kimlab/StressGenePred", - "avatar": "https://avatars0.githubusercontent.com/u/24263727?v=4", - "description": "Stress predicting framework with microarray data based on CMCL and logical correlation model", + "uid": "github/danielacarrasco/GLACiAR", + "url": "https://github.com/danielacarrasco/GLACiAR", + "rel": "/software/repository/github/danielacarrasco/GLACiAR", + "avatar": "https://avatars.githubusercontent.com/u/17707372?v=4", + "description": "GLACiAR (GaLAxy survey Completeness AlgoRithm) is an open-source python tool for simulations of source recovery and completeness in galaxy surveys.", "topics": [] }, { - "uid": "github/kuenzelab/ENDURE", - "url": "https://github.com/kuenzelab/ENDURE", - "rel": "/software/repository/github/kuenzelab/ENDURE", - "avatar": "https://avatars.githubusercontent.com/u/121185423?v=4", - "description": "Tool for energy breakdown analysis of protein designs", + "uid": "github/gpertea/cdbfasta", + "url": "https://github.com/gpertea/cdbfasta", + "rel": "/software/repository/github/gpertea/cdbfasta", + "avatar": "https://avatars.githubusercontent.com/u/3372619?v=4", + "description": "Constant DataBase tools for indexing and retrieving records from multi-FASTA or similarly structured files", "topics": [] }, { - "uid": "github/TomKellyGenetics/graphsim", - "url": "https://github.com/TomKellyGenetics/graphsim", - "rel": "/software/repository/github/TomKellyGenetics/graphsim", - "avatar": "https://avatars1.githubusercontent.com/u/5493325?v=4", - "description": "R package: Simulate Expression data from igraph network using mvtnorm (multivariate normal).", - "topics": [ - "r-stats", - "igraph-networks", - "simulated-data", - "graph-algorithms", - "package", - "joss", - "genetics", - "gene-expression", - "gene-regulatory-networks", - "benchmarking", - "simulation-modeling", - "genomics", - "genomic-data-analysis", - "ngs-analysis" - ] + "uid": "github/gpertea/gclib", + "url": "https://github.com/gpertea/gclib", + "rel": "/software/repository/github/gpertea/gclib", + "avatar": "https://avatars.githubusercontent.com/u/3372619?v=4", + "description": "GCLib - Genomic C++ library of reusable code for bioinformatics projects", + "topics": [] }, { - "uid": "github/mswzeus/TargetNet", - "url": "https://github.com/mswzeus/TargetNet", - "rel": "/software/repository/github/mswzeus/TargetNet", - "avatar": "https://avatars.githubusercontent.com/u/49700882?v=4", - "description": "Official Pytorch implementation of TargetNet, Bioinformatics 2022", - "topics": [ - "targetnet", - "microrna-target-prediction", - "pytorch" - ] + "uid": "github/kolikem/loma", + "url": "https://github.com/kolikem/loma", + "rel": "/software/repository/github/kolikem/loma", + "avatar": "https://avatars.githubusercontent.com/u/100743374?v=4", + "description": null, + "topics": [] }, { - "uid": "github/BorgwardtLab/simbsig", - "url": "https://github.com/BorgwardtLab/simbsig", - "rel": "/software/repository/github/BorgwardtLab/simbsig", - "avatar": "https://avatars.githubusercontent.com/u/15212542?v=4", - "description": "The official implementation for the SIMBSIG package", + "uid": "github/SWAT-Sheffield/SAC", + "url": "https://github.com/SWAT-Sheffield/SAC", + "rel": "/software/repository/github/SWAT-Sheffield/SAC", + "avatar": "https://avatars.githubusercontent.com/u/9036395?v=4", + "description": "The Sheffield Advanced Code", "topics": [] }, { - "uid": "github/JuliaDiff/ReverseDiff.jl", - "url": "https://github.com/JuliaDiff/ReverseDiff.jl", - "rel": "/software/repository/github/JuliaDiff/ReverseDiff.jl", - "avatar": "https://avatars.githubusercontent.com/u/7750915?v=4", - "description": "Reverse Mode Automatic Differentiation for Julia", - "topics": [ - "julia", - "calculus", - "automatic-differentiation" - ] + "uid": "github/dipol-uf/DIPOL-UF", + "url": "https://github.com/dipol-uf/DIPOL-UF", + "rel": "/software/repository/github/dipol-uf/DIPOL-UF", + "avatar": "https://avatars.githubusercontent.com/u/78904164?v=4", + "description": "DIPOL-3", + "topics": [] }, { - "uid": "github/JuliaDiff/ForwardDiff.jl", - "url": "https://github.com/JuliaDiff/ForwardDiff.jl", - "rel": "/software/repository/github/JuliaDiff/ForwardDiff.jl", - "avatar": "https://avatars.githubusercontent.com/u/7750915?v=4", - "description": "Forward Mode Automatic Differentiation for Julia", - "topics": [ - "julia", - "calculus", - "automatic-differentiation" - ] + "uid": "github/avigan/SPHERE", + "url": "https://github.com/avigan/SPHERE", + "rel": "/software/repository/github/avigan/SPHERE", + "avatar": "https://avatars.githubusercontent.com/u/29944664?v=4", + "description": "Reduction and analysis code for the VLT/SPHERE instrument", + "topics": [] }, { - "uid": "github/oskarhs/AutoHist.jl", - "url": "https://github.com/oskarhs/AutoHist.jl", - "rel": "/software/repository/github/oskarhs/AutoHist.jl", - "avatar": "https://avatars.githubusercontent.com/u/47379891?v=4", - "description": "Fast and automatic histogram construction in Julia", - "topics": [ - "histogram", - "julia", - "julia-package", - "statistics" - ] + "uid": "github/avigan/pyZELDA", + "url": "https://github.com/avigan/pyZELDA", + "rel": "/software/repository/github/avigan/pyZELDA", + "avatar": "https://avatars.githubusercontent.com/u/29944664?v=4", + "description": "Zernike wavefront sensor analysis and simulation tools", + "topics": [] }, { - "uid": "github/parmoo/parmoo", - "url": "https://github.com/parmoo/parmoo", - "rel": "/software/repository/github/parmoo/parmoo", - "avatar": "https://avatars.githubusercontent.com/u/71412470?v=4", - "description": "Python library for parallel multiobjective simulation optimization", - "topics": [ - "multiobjective-optimization", - "python3", - "simulation-optimization", - "surrogate-based-optimization", - "blackbox-optimization", - "mathematical-software", - "multicriteria-optimization", - "multiobjective", - "numerical-optimization", - "simulation-based-optimization", - "response-surface-methodology" - ] + "uid": "github/al-mcintyre/mCaller", + "url": "https://github.com/al-mcintyre/mCaller", + "rel": "/software/repository/github/al-mcintyre/mCaller", + "avatar": "https://avatars.githubusercontent.com/u/13323675?v=4", + "description": "A python program to call methylation (m6A in DNA) from nanopore signal data ", + "topics": [] }, { - "uid": "github/thomas0809/MolScribe", - "url": "https://github.com/thomas0809/MolScribe", - "rel": "/software/repository/github/thomas0809/MolScribe", - "avatar": "https://avatars.githubusercontent.com/u/11373553?v=4", - "description": "Robust Molecular Structure Recognition with Image-to-Graph Generation", - "topics": [ - "chemistry", - "deep-learning", - "molecule" - ] + "uid": "github/CHRF-Genomics/Paratype", + "url": "https://github.com/CHRF-Genomics/Paratype", + "rel": "/software/repository/github/CHRF-Genomics/Paratype", + "avatar": "https://avatars.githubusercontent.com/u/74655325?v=4", + "description": "Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.", + "topics": [] }, { - "uid": "github/nextgenusfs/funannotate", - "url": "https://github.com/nextgenusfs/funannotate", - "rel": "/software/repository/github/nextgenusfs/funannotate", - "avatar": "https://avatars.githubusercontent.com/u/6164308?v=4", - "description": "Eukaryotic Genome Annotation Pipeline", + "uid": "github/OrchardLANL/DPFEHM.jl", + "url": "https://github.com/OrchardLANL/DPFEHM.jl", + "rel": "/software/repository/github/OrchardLANL/DPFEHM.jl", + "avatar": "https://avatars.githubusercontent.com/u/70452955?v=4", + "description": "DPFEHM: A Differentiable Subsurface Flow Simulator", "topics": [ - "genome-annotation", - "gene-models", - "comparative-genomics", - "ncbi-submission" + "subsurface-flow", + "differentiable-programming", + "adjoint-method" ] }, { - "uid": "github/nextgenusfs/amptk", - "url": "https://github.com/nextgenusfs/amptk", - "rel": "/software/repository/github/nextgenusfs/amptk", - "avatar": "https://avatars.githubusercontent.com/u/6164308?v=4", - "description": "AMPtk: Amplicon ToolKit for NGS data (formally UFITS)", + "uid": "github/JoWestermann/smolyax", + "url": "https://github.com/JoWestermann/smolyax", + "rel": "/software/repository/github/JoWestermann/smolyax", + "avatar": "https://avatars.githubusercontent.com/u/91186482?v=4", + "description": "Fast high-dimensional interpolation of vector valued functions in JAX", "topics": [ - "amplicons", - "microbiome", - "mycobiome", - "next-generation-sequencing", - "fungi", - "rdna", - "coi", - "lsu", - "co1", - "mtco1" + "barycentric-interpolation", + "jax", + "polynomial-interpolation", + "sparse-grids", + "smolyak-operator", + "numba", + "polynomial-chaos" ] }, { - "uid": "github/saltastro/pyhrs", - "url": "https://github.com/saltastro/pyhrs", - "rel": "/software/repository/github/saltastro/pyhrs", - "avatar": "https://avatars.githubusercontent.com/u/736730?v=4", - "description": "Software for reducing observations from the SALT High Resolution Spectrograph", - "topics": [] - }, - { - "uid": "github/PhilippJunk/homelette", - "url": "https://github.com/PhilippJunk/homelette", - "rel": "/software/repository/github/PhilippJunk/homelette", - "avatar": "https://avatars.githubusercontent.com/u/69007269?v=4", - "description": "A unified and modular interface to homology modelling software", - "topics": [] - }, - { - "uid": "github/efpl-columbia/PointClouds.jl", - "url": "https://github.com/efpl-columbia/PointClouds.jl", - "rel": "/software/repository/github/efpl-columbia/PointClouds.jl", - "avatar": "https://avatars.githubusercontent.com/u/81380630?v=4", - "description": "Fast & flexible processing of lidar point-cloud data", + "uid": "github/C0PEP0D/otto", + "url": "https://github.com/C0PEP0D/otto", + "rel": "/software/repository/github/C0PEP0D/otto", + "avatar": "https://avatars.githubusercontent.com/u/83273482?v=4", + "description": "a Python package to simulate, solve and visualize the source-tracking POMDP", "topics": [ - "julia", - "lidar", - "point-cloud" + "pomdp", + "reinforcement-learning", + "olfactory-search", + "source-tracking" ] }, { - "uid": "github/valeriabonapersona/repair", - "url": "https://github.com/valeriabonapersona/RePAIR", - "rel": "/software/repository/github/valeriabonapersona/repair", - "avatar": "https://avatars.githubusercontent.com/u/46342235?v=4", - "description": "Reduction from Prior Animal Informed Research", + "uid": "github/iain-mcdonald/PySSED", + "url": "https://github.com/iain-mcdonald/PySSED", + "rel": "/software/repository/github/iain-mcdonald/PySSED", + "avatar": "https://avatars.githubusercontent.com/u/84905141?v=4", + "description": null, "topics": [] }, { - "uid": "github/jmschrei/pomegranate", - "url": "https://github.com/jmschrei/pomegranate", - "rel": "/software/repository/github/jmschrei/pomegranate", - "avatar": "https://avatars2.githubusercontent.com/u/3916816?v=4", - "description": "Fast, flexible and easy to use probabilistic modelling in Python.", + "uid": "github/DistrictDataLabs/yellowbrick", + "url": "https://github.com/DistrictDataLabs/yellowbrick", + "rel": "/software/repository/github/DistrictDataLabs/yellowbrick", + "avatar": "https://avatars2.githubusercontent.com/u/7107115?v=4", + "description": "Visual analysis and diagnostic tools to facilitate machine learning model selection.", "topics": [ - "python", "machine-learning", - "probabilistic-graphical-models", - "cython", - "parallel" - ] - }, - { - "uid": "github/hishamhm/htop", - "url": "https://github.com/hishamhm/htop", - "rel": "/software/repository/github/hishamhm/htop", - "avatar": "https://avatars.githubusercontent.com/u/245621?v=4", - "description": "htop is an interactive text-mode process viewer for Unix systems. It aims to be a better 'top'.", - "topics": [ - "c", - "terminal", - "process-monitor", - "htop", - "tui", - "system", - "console", - "console-application", - "linux", - "freebsd", - "openbsd", - "macos" + "visual-analysis", + "model-selection", + "visualization", + "scikit-learn", + "visualizer", + "matplotlib", + "python", + "estimator", + "anaconda" ] }, { - "uid": "github/inesbmartins02/HYMET", - "url": "https://github.com/inesbmartins02/HYMET", - "rel": "/software/repository/github/inesbmartins02/HYMET", - "avatar": "https://avatars.githubusercontent.com/u/165905510?v=4", - "description": null, + "uid": "github/egstrom/cluster-in-a-box", + "url": "https://github.com/egstrom/cluster-in-a-box", + "rel": "/software/repository/github/egstrom/cluster-in-a-box", + "avatar": "https://avatars.githubusercontent.com/u/8138808?v=4", + "description": "Statistical model of protostellar clusters", "topics": [] }, { - "uid": "github/emerge-erc/ALminer", - "url": "https://github.com/emerge-erc/ALminer", - "rel": "/software/repository/github/emerge-erc/ALminer", - "avatar": "https://avatars.githubusercontent.com/u/84787715?v=4", - "description": "ALminer: ALMA archive mining and visualization toolkit", + "uid": "github/IonRepo/IonDiff", + "url": "https://github.com/IonRepo/IonDiff", + "rel": "/software/repository/github/IonRepo/IonDiff", + "avatar": "https://avatars.githubusercontent.com/u/128382389?v=4", + "description": "Unsupervised identification and analysis of ion-hopping events in solid state electrolytes.", "topics": [] }, { - "uid": "github/Qiskit/qiskit-experiments", - "url": "https://github.com/Qiskit/qiskit-experiments", - "rel": "/software/repository/github/Qiskit/qiskit-experiments", - "avatar": "https://avatars.githubusercontent.com/u/30696987?v=4", - "description": "Qiskit Experiments", - "topics": [ - "qiskit" - ] - }, - { - "uid": "github/Qiskit/rustworkx", - "url": "https://github.com/Qiskit/rustworkx", - "rel": "/software/repository/github/Qiskit/rustworkx", - "avatar": "https://avatars.githubusercontent.com/u/30696987?v=4", - "description": "A high performance Python graph library implemented in Rust.", + "uid": "github/Kamuish/archi", + "url": "https://github.com/Kamuish/archi", + "rel": "/software/repository/github/Kamuish/archi", + "avatar": "https://avatars.githubusercontent.com/u/33263706?v=4", + "description": "Pipeline to study CHEOPS background stars", "topics": [ - "graph", - "dag", - "rust", "python", - "graph-theory", "hacktoberfest" ] }, { - "uid": "github/nliulab/HRnV-Calc", - "url": "https://github.com/nliulab/HRnV-Calc", - "rel": "/software/repository/github/nliulab/HRnV-Calc", - "avatar": "https://avatars.githubusercontent.com/u/53963109?v=4", - "description": "HRnV-Calc software for heart rate n-variability and heart rate variability analysis", - "topics": [] + "uid": "github/jspsych/jspsych", + "url": "https://github.com/jspsych/jsPsych", + "rel": "/software/repository/github/jspsych/jspsych", + "avatar": "https://avatars.githubusercontent.com/u/16901698?v=4", + "description": "Create behavioral experiments in a browser using JavaScript", + "topics": [ + "javascript", + "experiments", + "science", + "psychology", + "psychology-experiments", + "research", + "jspsych", + "experimental-design" + ] }, { - "uid": "github/pangenome/smoothxg", - "url": "https://github.com/pangenome/smoothxg", - "rel": "/software/repository/github/pangenome/smoothxg", - "avatar": "https://avatars.githubusercontent.com/u/60657583?v=4", - "description": "linearize and simplify variation graphs using blocked partial order alignment", + "uid": "github/fairtracks/omnipy_examples", + "url": "https://github.com/fairtracks/omnipy_examples", + "rel": "/software/repository/github/fairtracks/omnipy_examples", + "avatar": "https://avatars.githubusercontent.com/u/50033677?v=4", + "description": null, "topics": [] }, { - "uid": "github/rcarragh/c212", - "url": "https://github.com/rcarragh/c212", - "rel": "/software/repository/github/rcarragh/c212", - "avatar": "https://avatars1.githubusercontent.com/u/45394771?v=4", - "description": "Methods for detecting safety signals in clinical trials using groupings of adverse events by body-system or system organ class.", + "uid": "github/txopen/histoc", + "url": "https://github.com/txopen/histoc", + "rel": "/software/repository/github/txopen/histoc", + "avatar": "https://avatars.githubusercontent.com/u/107883455?v=4", + "description": "Histocompatibility analysis performed by kidney allocation systems for transplantation", "topics": [] }, { - "uid": "github/Juke34/AliNe", - "url": "https://github.com/Juke34/AliNe", - "rel": "/software/repository/github/Juke34/AliNe", - "avatar": "https://avatars.githubusercontent.com/u/6769395?v=4", - "description": "Nextflow Alignment Pipeline - from fastq.gz to sorted bam with ease", + "uid": "github/ropensci-review-tools/pkgstats", + "url": "https://github.com/ropensci-review-tools/pkgstats", + "rel": "/software/repository/github/ropensci-review-tools/pkgstats", + "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", + "description": "Historical statistics of every R package ever", "topics": [ - "bowtie2", - "bwa", - "hisat2", - "minimap2", - "nextflow", - "nucmer", - "star", - "graphmap2", - "bbmap", - "bowtie", - "kallisto", - "ngmlr", - "novoalign", - "subread", - "bwa-sw", - "sublong", - "bmw-mem2", - "salmon", - "starlong", - "last" + "scalereprod" ] }, { - "uid": "github/jgducoin/galclaim", - "url": "https://github.com/jgducoin/galclaim", - "rel": "/software/repository/github/jgducoin/galclaim", - "avatar": "https://avatars.githubusercontent.com/u/44273935?v=4", - "description": "GALaxy Chance of Local Alignment algorIthM", - "topics": [] - }, - { - "uid": "github/yatiml/yatiml", - "url": "https://github.com/yatiml/yatiml", - "rel": "/software/repository/github/yatiml/yatiml", - "avatar": "https://avatars3.githubusercontent.com/u/42937038?v=4", - "description": "Python library for YAML type inference, schema checking and syntactic sugar", - "topics": [] + "uid": "github/ropensci-review-tools/srr", + "url": "https://github.com/ropensci-review-tools/srr", + "rel": "/software/repository/github/ropensci-review-tools/srr", + "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", + "description": "Software Review Roclets", + "topics": [ + "scalereprod" + ] }, { - "uid": "github/mantzaris/LMDiskANN.jl", - "url": "https://github.com/mantzaris/LMDiskANN.jl", - "rel": "/software/repository/github/mantzaris/LMDiskANN.jl", - "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", - "description": "Julia Implementation of Low Memory Disk ANN (LM-DiskANN)", + "uid": "github/ropensci-review-tools/pkgcheck", + "url": "https://github.com/ropensci-review-tools/pkgcheck", + "rel": "/software/repository/github/ropensci-review-tools/pkgcheck", + "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", + "description": "Check whether a package is ready for submission to rOpenSci's peer-review system", "topics": [ - "approximate-nearest-neighbor-search", - "diskann", - "julia", - "julialang", - "vector-database" + "scalereprod" ] }, { - "uid": "github/mantzaris/WunDeeDB.jl", - "url": "https://github.com/mantzaris/WunDeeDB.jl", - "rel": "/software/repository/github/mantzaris/WunDeeDB.jl", - "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", - "description": "Your just-works / zero-config / embedded / WAL: vector database", + "uid": "github/ropensci-review-tools/autotest", + "url": "https://github.com/ropensci-review-tools/autotest", + "rel": "/software/repository/github/ropensci-review-tools/autotest", + "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", + "description": "Automatic testing of R packages", "topics": [ - "embedded", - "julia", - "julialang", - "vector-database" + "scalereprod" ] }, { - "uid": "github/mantzaris/BenchmarkDataNLP.jl", - "url": "https://github.com/mantzaris/BenchmarkDataNLP.jl", - "rel": "/software/repository/github/mantzaris/BenchmarkDataNLP.jl", - "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", - "description": "Generate synthetic text from a variety of methods, eg. Context Free Grammars (CFGs), with parameterized complexity to test your NLP methods (like LLMs)", + "uid": "github/ropensci-review-tools/roreviewapi", + "url": "https://github.com/ropensci-review-tools/roreviewapi", + "rel": "/software/repository/github/ropensci-review-tools/roreviewapi", + "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", + "description": "API endpoint for package reviews via ropensci-review-bot", "topics": [ - "corpus-data", - "data-generation", - "data-generator", - "llm-training", - "nlp" + "scalereprod" ] }, { - "uid": "github/bioexcel/biobb_wf_flexdyn", - "url": "https://github.com/bioexcel/biobb_wf_flexdyn", - "rel": "/software/repository/github/bioexcel/biobb_wf_flexdyn", - "avatar": "https://avatars.githubusercontent.com/u/15978232?v=4", - "description": null, + "uid": "github/bootphon/phonemizer", + "url": "https://github.com/bootphon/phonemizer", + "rel": "/software/repository/github/bootphon/phonemizer", + "avatar": "https://avatars.githubusercontent.com/u/6418875?v=4", + "description": "Simple text to phones converter for multiple languages", "topics": [] }, { - "uid": "github/nevrome/bleiglas", - "url": "https://github.com/nevrome/bleiglas", - "rel": "/software/repository/github/nevrome/bleiglas", - "avatar": "https://avatars.githubusercontent.com/u/10789038?v=4", - "description": "R Package - Spatiotemporal Data Interpolation and Visualisation based on 3D Tessellation", + "uid": "github/kkma89/dmcalc", + "url": "https://github.com/kkma89/dmcalc", + "rel": "/software/repository/github/kkma89/dmcalc", + "avatar": "https://avatars.githubusercontent.com/u/44204165?v=4", + "description": "Python code to calculate in-band dispersion measure of pulsars", + "topics": [] + }, + { + "uid": "github/icb-dcm/pyabc", + "url": "https://github.com/ICB-DCM/pyABC", + "rel": "/software/repository/github/icb-dcm/pyabc", + "avatar": "https://avatars.githubusercontent.com/u/17879961?v=4", + "description": "distributed, likelihood-free inference", "topics": [ - "r", - "tessellation", - "3d", - "voronoi" + "abc", + "approximate-bayesian-inference", + "likelihood-free-inference", + "parameter-inference" ] }, { - "uid": "github/FelixKrueger/TrimGalore", - "url": "https://github.com/FelixKrueger/TrimGalore", - "rel": "/software/repository/github/FelixKrueger/TrimGalore", - "avatar": "https://avatars.githubusercontent.com/u/5870509?v=4", - "description": "A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data", + "uid": "github/pmelchior/shapelens", + "url": "https://github.com/pmelchior/shapelens", + "rel": "/software/repository/github/pmelchior/shapelens", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Astronomical image analysis and shape estimation framework", "topics": [] }, { - "uid": "github/wajidarshad/ESIDE", - "url": "https://github.com/wajidarshad/ESIDE", - "rel": "/software/repository/github/wajidarshad/ESIDE", - "avatar": "https://avatars.githubusercontent.com/u/13540598?v=4", - "description": "Earthworm Species IDEntification", + "uid": "github/pmelchior/skylens", + "url": "https://github.com/pmelchior/skylens", + "rel": "/software/repository/github/pmelchior/skylens", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "SkyLens++ is a simulation package for optical astronomical observations.", "topics": [] }, { - "uid": "github/yi-jia-li/cue", - "url": "https://github.com/yi-jia-li/cue", - "rel": "/software/repository/github/yi-jia-li/cue", - "avatar": "https://avatars.githubusercontent.com/u/78584993?v=4", - "description": "nebular emission modeling", - "topics": [] + "uid": "github/pmelchior/spender", + "url": "https://github.com/pmelchior/spender", + "rel": "/software/repository/github/pmelchior/spender", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Spectrum encoder and decoder", + "topics": [ + "astronomy", + "autoencoder", + "spectroscopy" + ] }, { - "uid": "github/LabLaskin/MSIGen", - "url": "https://github.com/LabLaskin/MSIGen", - "rel": "/software/repository/github/LabLaskin/MSIGen", - "avatar": "https://avatars.githubusercontent.com/u/58985859?v=4", - "description": "Python package for visualizing MS images from line scans", + "uid": "github/pmelchior/des-exp-checker", + "url": "https://github.com/pmelchior/des-exp-checker", + "rel": "/software/repository/github/pmelchior/des-exp-checker", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Crowdsourced image quality control for the Dark Energy Survey", "topics": [] }, { - "uid": "github/rjtanner/StarburstPy", - "url": "https://github.com/rjtanner/StarburstPy", - "rel": "/software/repository/github/rjtanner/StarburstPy", - "avatar": "https://avatars.githubusercontent.com/u/58440445?v=4", - "description": "Python Wrapper for Starburst99", + "uid": "github/pmelchior/pyGMMis", + "url": "https://github.com/pmelchior/pygmmis", + "rel": "/software/repository/github/pmelchior/pyGMMis", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Gaussian mixture model for incomplete (missing or truncated) and noisy data", "topics": [ - "astronomy", - "astrophysics", - "population-synthesis", - "stellar-populations" + "data-analysis", + "gmm" ] }, { - "uid": "github/rreischke/OneCovariance", - "url": "https://github.com/rreischke/OneCovariance", - "rel": "/software/repository/github/rreischke/OneCovariance", - "avatar": "https://avatars.githubusercontent.com/u/31727230?v=4", - "description": "OneCovariance code for KiDS to play", + "uid": "github/pmelchior/epsnoise", + "url": "https://github.com/pmelchior/epsnoise", + "rel": "/software/repository/github/pmelchior/epsnoise", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Simulate pixel noise for weak-lensing ellipticity measurements", "topics": [] }, { - "uid": "github/rreischke/frb_covariance", - "url": "https://github.com/rreischke/frb_covariance", - "rel": "/software/repository/github/rreischke/frb_covariance", - "avatar": "https://avatars.githubusercontent.com/u/31727230?v=4", - "description": null, + "uid": "github/pmelchior/shear-stacking", + "url": "https://github.com/pmelchior/shear-stacking", + "rel": "/software/repository/github/pmelchior/shear-stacking", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Stacked shear profiles and tests based upon them", "topics": [] }, { - "uid": "github/fair-workflows/nanopub", - "url": "https://github.com/fair-workflows/nanopub", - "rel": "/software/repository/github/fair-workflows/nanopub", - "avatar": "https://avatars3.githubusercontent.com/u/36536864?v=4", - "description": "Python client for searching, publishing and modifying nanopublications.", + "uid": "github/pmelchior/skymapper", + "url": "https://github.com/pmelchior/skymapper", + "rel": "/software/repository/github/pmelchior/skymapper", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "Mapping astronomical survey data on the sky, handsomely", "topics": [ - "nanopublications" + "matplotlib", + "maps", + "projection-mapping", + "astronomy" ] }, { - "uid": "github/fair-workflows/NanopubJL", - "url": "https://github.com/fair-workflows/NanopubJL", - "rel": "/software/repository/github/fair-workflows/NanopubJL", - "avatar": "https://avatars.githubusercontent.com/u/36536864?v=4", - "description": "JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook", - "topics": [] + "uid": "github/pmelchior/scarlet", + "url": "https://github.com/pmelchior/scarlet", + "rel": "/software/repository/github/pmelchior/scarlet", + "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", + "description": "hyperspectral galaxy modeling and deblending", + "topics": [ + "image-analysis", + "source-separation", + "component-separation", + "nmf" + ] }, { - "uid": "github/fair-workflows/fairworkflows", - "url": "https://github.com/fair-workflows/fairworkflows", - "rel": "/software/repository/github/fair-workflows/fairworkflows", - "avatar": "https://avatars.githubusercontent.com/u/36536864?v=4", - "description": "A python library for constructing, modifying and publishing scientific workflows described using semantic technologies.", + "uid": "github/omboersma/deepglow", + "url": "https://github.com/OMBoersma/DeepGlow", + "rel": "/software/repository/github/omboersma/deepglow", + "avatar": "https://avatars.githubusercontent.com/u/32190968?v=4", + "description": "A neural network emulator for BOXFIT", "topics": [] }, { - "uid": "github/snijderlab/stitch", - "url": "https://github.com/snijderlab/stitch", - "rel": "/software/repository/github/snijderlab/stitch", - "avatar": "https://avatars.githubusercontent.com/u/95350222?v=4", - "description": "Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling", + "uid": "github/mj-will/nessai", + "url": "https://github.com/mj-will/nessai", + "rel": "/software/repository/github/mj-will/nessai", + "avatar": "https://avatars.githubusercontent.com/u/25609742?v=4", + "description": "nessai: Nested Sampling with Artificial Intelligence", "topics": [ - "mass-spectrometry", - "antibody", - "sequencing" + "pytorch", + "normalizing-flows", + "nested-sampling", + "python", + "bayesian-inference", + "bilby", + "machine-learning" ] }, { - "uid": "github/baptklein/ATMOSPHERIX_DATA_RED", - "url": "https://github.com/baptklein/ATMOSPHERIX_DATA_RED", - "rel": "/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", - "avatar": "https://avatars.githubusercontent.com/u/57224454?v=4", - "description": null, - "topics": [] + "uid": "github/riatelab/osrm", + "url": "https://github.com/riatelab/osrm", + "rel": "/software/repository/github/riatelab/osrm", + "avatar": "https://avatars.githubusercontent.com/u/17590565?v=4", + "description": "Shortest Paths and Travel Time from OpenStreetMap with R", + "topics": [ + "osrm", + "travel", + "openstreetmap", + "r", + "cran", + "shortest-paths", + "r-package" + ] }, { - "uid": "github/OpenBioLink/Explorer", - "url": "https://github.com/OpenBioLink/Explorer", - "rel": "/software/repository/github/OpenBioLink/Explorer", - "avatar": "https://avatars.githubusercontent.com/u/57104313?v=4", + "uid": "github/ledatelescope/bifrost", + "url": "https://github.com/ledatelescope/bifrost", + "rel": "/software/repository/github/ledatelescope/bifrost", + "avatar": "https://avatars.githubusercontent.com/u/9952818?v=4", + "description": "A stream processing framework for high-throughput applications.", + "topics": [ + "gpu", + "pipeline", + "python", + "cpp", + "bifrost", + "high-throughput-computing", + "high-performance-computing", + "astronomy", + "radio-astronomy", + "cuda" + ] + }, + { + "uid": "github/Muhammad-Arif-NUST/BVP_Pred_Unb", + "url": "https://github.com/Muhammad-Arif-NUST/BVP_Pred_Unb", + "rel": "/software/repository/github/Muhammad-Arif-NUST/BVP_Pred_Unb", + "avatar": "https://avatars2.githubusercontent.com/u/27894155?v=4", "description": null, "topics": [] }, { - "uid": "github/PeterBartram/TES", - "url": "https://github.com/PeterBartram/TES", - "rel": "/software/repository/github/PeterBartram/TES", - "avatar": "https://avatars.githubusercontent.com/u/22742253?v=4", - "description": "Terrestrial Exoplanet Simulator public repository", - "topics": [] + "uid": "github/QEF/q-e", + "url": "https://github.com/QEF/q-e", + "rel": "/software/repository/github/QEF/q-e", + "avatar": "https://avatars.githubusercontent.com/u/5255480?v=4", + "description": "Mirror of the Quantum ESPRESSO repository. Please do not post Issues or pull requests here. Use gitlab.com/QEF/q-e instead.", + "topics": [ + "quantum-espresso" + ] }, { - "uid": "github/KIT-MBS/pyREX", - "url": "https://github.com/KIT-MBS/pyrexMD", - "rel": "/software/repository/github/KIT-MBS/pyREX", - "avatar": "https://avatars.githubusercontent.com/u/28391071?v=4", - "description": "Workflow-orientated python package for Replica Exchange Molecular Dynamics", + "uid": "github/HIPS/autograd", + "url": "https://github.com/HIPS/autograd", + "rel": "/software/repository/github/HIPS/autograd", + "avatar": "https://avatars1.githubusercontent.com/u/7935606?v=4", + "description": "Efficiently computes derivatives of numpy code.", "topics": [] }, { - "uid": "github/CatarinaMMarques/FisherCosmology", - "url": "https://github.com/CatarinaMMarques/FisherCosmology", - "rel": "/software/repository/github/CatarinaMMarques/FisherCosmology", - "avatar": "https://avatars.githubusercontent.com/u/83832933?v=4", - "description": "Forecasting Code for Redshift Drift and Alpha Measurements", - "topics": [] + "uid": "github/lumen-org/lumen", + "url": "https://github.com/lumen-org/lumen", + "rel": "/software/repository/github/lumen-org/lumen", + "avatar": "https://avatars.githubusercontent.com/u/43880697?v=4", + "description": "Interactive web application for the exploration, comparision and validation of probability models and its data", + "topics": [ + "web-application" + ] }, { - "uid": "github/julblarod/SOPHISM", - "url": "https://github.com/julblarod/SOPHISM", - "rel": "/software/repository/github/julblarod/SOPHISM", - "avatar": "https://avatars.githubusercontent.com/u/37220095?v=4", - "description": "Repository for software instrument simulator SOPHISM", - "topics": [] + "uid": "github/symmy596/SurfinPy", + "url": "https://github.com/symmy596/SurfinPy", + "rel": "/software/repository/github/symmy596/SurfinPy", + "avatar": "https://avatars.githubusercontent.com/u/26469895?v=4", + "description": "Thermodynamic Phase Diagram Generator", + "topics": [ + "density-functional-theory", + "thermodynamic-properties" + ] }, { - "uid": "github/Midnighter/dependency-info", - "url": "https://github.com/Midnighter/dependency-info", - "rel": "/software/repository/github/Midnighter/dependency-info", - "avatar": "https://avatars.githubusercontent.com/u/135653?v=4", - "description": "Retrieve and print Python package dependencies.", + "uid": "github/symmy596/Polypy", + "url": "https://github.com/symmy596/Polypy", + "rel": "/software/repository/github/symmy596/Polypy", + "avatar": "https://avatars.githubusercontent.com/u/26469895?v=4", + "description": "polypy - Analysis Tools for Solid State Molecular Dynamics and Monte Carlo Trajectories", + "topics": [ + "monte-carlo-simulation", + "molecular-dynamics-simulation", + "materials-science", + "solid-state-chemistry", + "solid-state-physics", + "simulation", + "chemistry" + ] + }, + { + "uid": "github/OpenDA-Association/OpenDA", + "url": "https://github.com/OpenDA-Association/OpenDA", + "rel": "/software/repository/github/OpenDA-Association/OpenDA", + "avatar": "https://avatars2.githubusercontent.com/u/25099235?v=4", + "description": "Open data assimilation toolbox", "topics": [] }, { - "uid": "github/epfl-radio-astro/LiSA", - "url": "https://github.com/epfl-radio-astro/LiSA", - "rel": "/software/repository/github/epfl-radio-astro/LiSA", - "avatar": "https://avatars.githubusercontent.com/u/100411188?v=4", - "description": "Lightweight Source finding Algorithms", + "uid": "github/pynucastro/pynucastro", + "url": "https://github.com/pynucastro/pynucastro", + "rel": "/software/repository/github/pynucastro/pynucastro", + "avatar": "https://avatars.githubusercontent.com/u/17711850?v=4", + "description": "python interfaces to the nuclear reaction rate databases", "topics": [] }, { - "uid": "github/epfl-radio-astro/PINION", - "url": "https://github.com/epfl-radio-astro/PINION", - "rel": "/software/repository/github/epfl-radio-astro/PINION", - "avatar": "https://avatars.githubusercontent.com/u/100411188?v=4", - "description": "A featherweight EoR simulation", + "uid": "github/molgenis/vibe-suppl", + "url": "https://github.com/molgenis/vibe-suppl", + "rel": "/software/repository/github/molgenis/vibe-suppl", + "avatar": "https://avatars.githubusercontent.com/u/1688158?v=4", + "description": "Variant Interpretation using Biological Evidence - supplemental files", "topics": [] }, { - "uid": "github/deniswerth/cosmoflow", - "url": "https://github.com/deniswerth/CosmoFlow", - "rel": "/software/repository/github/deniswerth/cosmoflow", - "avatar": "https://avatars.githubusercontent.com/u/62261961?v=4", - "description": "The Cosmological Flow -- a systematic approach to primordial correlators", + "uid": "github/molgenis/graph2vr", + "url": "https://github.com/molgenis/Graph2VR", + "rel": "/software/repository/github/molgenis/graph2vr", + "avatar": "https://avatars.githubusercontent.com/u/1688158?v=4", + "description": "Visualising / Exploring Linked Data (SPARQL Construct queries) in Virtual Reality.", "topics": [ - "correlators", - "cosmology", - "inflation", - "cosmologicalflow", - "non-gaussianities" + "graph-visualization", + "phd-project", + "prototype", + "querying", + "sparql", + "virtual-reality" ] }, { - "uid": "github/dkn16/H21F", - "url": "https://github.com/dkn16/H21F", - "rel": "/software/repository/github/dkn16/H21F", - "avatar": "https://avatars.githubusercontent.com/u/81129696?v=4", - "description": "A Gaussian Process based 21-cm foreground separation code.", + "uid": "github/cdalvaro/machine-learning-master-thesis", + "url": "https://github.com/cdalvaro/machine-learning-master-thesis", + "rel": "/software/repository/github/cdalvaro/machine-learning-master-thesis", + "avatar": "https://avatars.githubusercontent.com/u/16347742?v=4", + "description": "\u2728\ud83d\udef0 Machine Learning Tools for Open Cluster Characterization with Gaia DR2 Data", + "topics": [ + "gaiadr2", + "machine-learning", + "open-clusters", + "gaia-dr2", + "mission-gaia", + "deep-embedded-clustering", + "dec", + "open-clusters-characterization" + ] + }, + { + "uid": "github/carpenterphysics/DarkFlux", + "url": "https://github.com/carpenterphysics/DarkFlux", + "rel": "/software/repository/github/carpenterphysics/DarkFlux", + "avatar": "https://avatars.githubusercontent.com/u/36904752?v=4", + "description": "DarkFlux is a tool to compute Dark Matter the Dark Matter annihilation spectrum in Next Generation Dark Matter Models", "topics": [] }, { - "uid": "github/dkn16/Synax", - "url": "https://github.com/dkn16/Synax", - "rel": "/software/repository/github/dkn16/Synax", - "avatar": "https://avatars.githubusercontent.com/u/81129696?v=4", - "description": "All sky Synchrotron emission simulation with JAX", + "uid": "github/arpan-52/Finalflash", + "url": "https://github.com/arpan-52/Finalflash", + "rel": "/software/repository/github/arpan-52/Finalflash", + "avatar": "https://avatars.githubusercontent.com/u/110227488?v=4", + "description": "An uGMRT Primary Beam Corrector with input FITS files", "topics": [] }, { - "uid": "github/watts-dev/watts", - "url": "https://github.com/watts-dev/watts", - "rel": "/software/repository/github/watts-dev/watts", - "avatar": "https://avatars.githubusercontent.com/u/97905312?v=4", - "description": "Workflow and Template Toolkit for Simulation (WATTS)", - "topics": [ - "python", - "simulation", - "templates", - "nuclear-energy" - ] + "uid": "github/eldariont/svim", + "url": "https://github.com/eldariont/svim", + "rel": "/software/repository/github/eldariont/svim", + "avatar": "https://avatars.githubusercontent.com/u/6477692?v=4", + "description": "Structural Variant Identification Method using Long Reads", + "topics": [] }, { - "uid": "github/Beryl-Jingxin/PyExoCross", - "url": "https://github.com/Beryl-Jingxin/PyExoCross", - "rel": "/software/repository/github/Beryl-Jingxin/PyExoCross", - "avatar": "https://avatars.githubusercontent.com/u/56116939?v=4", - "description": null, + "uid": "github/yrjia1015/CRISPRCasStack", + "url": "https://github.com/yrjia1015/CRISPRCasStack", + "rel": "/software/repository/github/yrjia1015/CRISPRCasStack", + "avatar": "https://avatars.githubusercontent.com/u/104757328?v=4", + "description": "A toolkit for automated identification of Cas proteins and CRISPR-Cas locus", "topics": [] }, { - "uid": "github/ISISNeutronMuon/quickBayes", - "url": "https://github.com/ISISNeutronMuon/quickBayes", - "rel": "/software/repository/github/ISISNeutronMuon/quickBayes", - "avatar": "https://avatars.githubusercontent.com/u/30296974?v=4", - "description": "A Python package for Bayesian analysis of data.", + "uid": "github/BioSTEAMDevelopmentGroup/thermosteam", + "url": "https://github.com/BioSTEAMDevelopmentGroup/thermosteam", + "rel": "/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", + "avatar": "https://avatars0.githubusercontent.com/u/61621970?v=4", + "description": "BioSTEAM's Premier Thermodynamic Engine", "topics": [ - "python", - "bayes" + "thermodynamics", + "reaction", + "chemical", + "mixture", + "properties", + "vapor-liquid-equilibrium", + "material-and-energy-balance", + "chemical-engineering", + "equations-of-state", + "liquid-liquid-equilibrium" ] }, { - "uid": "github/BaroudLab/Griottes", - "url": "https://github.com/BaroudLab/Griottes", - "rel": "/software/repository/github/BaroudLab/Griottes", - "avatar": "https://avatars.githubusercontent.com/u/97296791?v=4", - "description": "Python program to generate NetworkX graphs from segmented images.", + "uid": "github/gbrammer/unicorn", + "url": "https://github.com/gbrammer/unicorn", + "rel": "/software/repository/github/gbrammer/unicorn", + "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", + "description": "Full 3D-HST grism pipeline", + "topics": [] + }, + { + "uid": "github/gbrammer/grizli", + "url": "https://github.com/gbrammer/grizli", + "rel": "/software/repository/github/gbrammer/grizli", + "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", + "description": "Grizli: The \"Grism redshift and line\" analysis software", + "topics": [] + }, + { + "uid": "github/gbrammer/threedhst", + "url": "https://github.com/gbrammer/threedhst", + "rel": "/software/repository/github/gbrammer/threedhst", + "avatar": "https://avatars.githubusercontent.com/u/1577270?v=4", + "description": "3D-HST grism analysis software", "topics": [] }, { - "uid": "github/sidchaini/DistClassiPy", - "url": "https://github.com/sidchaini/DistClassiPy", - "rel": "/software/repository/github/sidchaini/DistClassiPy", - "avatar": "https://avatars.githubusercontent.com/u/40721514?v=4", - "description": "A python package for a distance-based classifier which can use several different distance metrics.", + "uid": "github/CoLRev-Environment/bib-dedupe", + "url": "https://github.com/CoLRev-Environment/bib-dedupe", + "rel": "/software/repository/github/CoLRev-Environment/bib-dedupe", + "avatar": "https://avatars.githubusercontent.com/u/101105237?v=4", + "description": null, "topics": [] }, { - "uid": "github/OSU-BMBL/IDAM", - "url": "https://github.com/OSU-BMBL/IDAM", - "rel": "/software/repository/github/OSU-BMBL/IDAM", - "avatar": "https://avatars.githubusercontent.com/u/46255124?v=4", - "description": "Infer disease-associated microbial biomarkers based on metagenomic and metatranscriptomic data", - "topics": [] + "uid": "github/JoelForamitti/agentpy", + "url": "https://github.com/JoelForamitti/agentpy", + "rel": "/software/repository/github/JoelForamitti/agentpy", + "avatar": "https://avatars.githubusercontent.com/u/57440945?v=4", + "description": "AgentPy is an open-source framework for the development and analysis of agent-based models in Python.", + "topics": [ + "agent-based-modeling", + "agent-based-simulation", + "abm", + "agentpy", + "python", + "networks", + "complex-systems", + "networkx", + "salib" + ] }, { - "uid": "github/NIFTI-Imaging/nifti_clib", - "url": "https://github.com/NIFTI-Imaging/nifti_clib", - "rel": "/software/repository/github/NIFTI-Imaging/nifti_clib", - "avatar": "https://avatars.githubusercontent.com/u/45666806?v=4", - "description": "C libraries for NIFTI support", + "uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", + "url": "https://github.com/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", + "rel": "/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", + "avatar": "https://avatars.githubusercontent.com/u/68539461?v=4", + "description": "Standalone code to generate the figures for the paper \"Fast Multiscale Diffusion on Graphs\" accepted at ICASSP 2022.", "topics": [] }, { - "uid": "github/Via-Appia/via-appia-online-viewer", - "url": "https://github.com/Via-Appia/via-appia-online-viewer", - "rel": "/software/repository/github/Via-Appia/via-appia-online-viewer", - "avatar": "https://avatars.githubusercontent.com/u/84012063?v=4", - "description": "Via Appia viewer application", + "uid": "github/Xomics/ACTIONdemonstrator_workflow", + "url": "https://github.com/Xomics/ACTIONdemonstrator_workflow", + "rel": "/software/repository/github/Xomics/ACTIONdemonstrator_workflow", + "avatar": "https://avatars.githubusercontent.com/u/60345209?v=4", + "description": "X-omics ACTION demonstrator multi-omics analysis workflow", "topics": [] }, { - "uid": "github/blankhaar/PORTAL", - "url": "https://github.com/blankhaar/PORTAL", - "rel": "/software/repository/github/blankhaar/PORTAL", - "avatar": "https://avatars.githubusercontent.com/u/50137743?v=4", - "description": "POlarized Radiative Transfer Adapted to Lines", + "uid": "github/reneheller/pile-up", + "url": "https://github.com/reneheller/pile-up", + "rel": "/software/repository/github/reneheller/pile-up", + "avatar": "https://avatars.githubusercontent.com/u/7735050?v=4", + "description": "A gnuplot script for Monte Carlo simulations of disk and stellar tidal torques acting on hot Jupiters", "topics": [] }, { - "uid": "github/schulze61/RhoPop", - "url": "https://github.com/schulze61/RhoPop", - "rel": "/software/repository/github/schulze61/RhoPop", - "avatar": "https://avatars.githubusercontent.com/u/43186618?v=4", - "description": null, + "uid": "github/vals/umis", + "url": "https://github.com/vals/umis", + "rel": "/software/repository/github/vals/umis", + "avatar": "https://avatars.githubusercontent.com/u/668803?v=4", + "description": "Tools for processing UMI RNA-tag data", "topics": [] }, { - "uid": "github/OncoRNALab/CiLiQuant", - "url": "https://github.com/OncoRNALab/CiLiQuant", - "rel": "/software/repository/github/OncoRNALab/CiLiQuant", - "avatar": "https://avatars.githubusercontent.com/u/74721403?v=4", - "description": null, + "uid": "github/pyFFTW/pyFFTW", + "url": "https://github.com/pyFFTW/pyFFTW", + "rel": "/software/repository/github/pyFFTW/pyFFTW", + "avatar": "https://avatars.githubusercontent.com/u/16965121?v=4", + "description": "A pythonic python wrapper around FFTW", "topics": [] }, { - "uid": "github/CAMI-challenge/CAMITAX", - "url": "https://github.com/CAMI-challenge/CAMITAX", - "rel": "/software/repository/github/CAMI-challenge/CAMITAX", - "avatar": "https://avatars.githubusercontent.com/u/8009060?v=4", - "description": "CAMITAX: Taxon labels for microbial genomes", + "uid": "github/koenderks/jaspAudit", + "url": "https://github.com/koenderks/jaspAudit", + "rel": "/software/repository/github/koenderks/jaspAudit", + "avatar": "https://avatars.githubusercontent.com/u/25059399?v=4", + "description": "The Audit module is developed to facilitate statistical auditing in both Bayesian and classical manifestations. The main feature is a workflow that helps guide auditors through the sampling process. Additionally, there are stand-alone analyses for planning, selecting, and evaluating a sample. The module is based on the R package jfa.", "topics": [] }, { - "uid": "github/CAMI-challenge/AMBER", - "url": "https://github.com/CAMI-challenge/AMBER", - "rel": "/software/repository/github/CAMI-challenge/AMBER", - "avatar": "https://avatars.githubusercontent.com/u/8009060?v=4", - "description": "AMBER: Assessment of Metagenome BinnERs", - "topics": [ - "binning", - "metagenomics", - "benchmarking", - "biobox" - ] + "uid": "github/ReGIS-org/regis-v2", + "url": "https://github.com/ReGIS-org/regis-v2", + "rel": "/software/repository/github/ReGIS-org/regis-v2", + "avatar": "https://avatars3.githubusercontent.com/u/32134501?v=4", + "description": "Angular-4 and cesiumjs based.", + "topics": [] }, { - "uid": "github/tkerscher/blast", - "url": "https://github.com/tkerscher/blast", - "rel": "/software/repository/github/tkerscher/blast", - "avatar": "https://avatars.githubusercontent.com/u/88444139?v=4", - "description": "Synchrotron peak estimator for blazars", - "topics": [ - "blazar", - "astrophysics" - ] + "uid": "github/ketch/RK-Opt", + "url": "https://github.com/ketch/RK-Opt", + "rel": "/software/repository/github/ketch/RK-Opt", + "avatar": "https://avatars1.githubusercontent.com/u/697763?v=4", + "description": "A package for the design of numerical ODE solvers", + "topics": [] }, { - "uid": "github/wasserman-group/pyCADMium", - "url": "https://github.com/wasserman-group/pyCADMium", - "rel": "/software/repository/github/wasserman-group/pyCADMium", - "avatar": "https://avatars.githubusercontent.com/u/54595041?v=4", - "description": "Solve the Kohn-Sham equations on a prolate spheroidal grid. ", + "uid": "github/ketch/nodepy", + "url": "https://github.com/ketch/nodepy", + "rel": "/software/repository/github/ketch/nodepy", + "avatar": "https://avatars1.githubusercontent.com/u/697763?v=4", + "description": "Analysis of initial value ODE solvers", "topics": [] }, { - "uid": "github/homerjed/sbgm", - "url": "https://github.com/homerjed/sbgm", - "rel": "/software/repository/github/homerjed/sbgm", - "avatar": "https://avatars.githubusercontent.com/u/47306716?v=4", - "description": "Score-based Diffusion models in JAX.", + "uid": "github/rodluger/everest", + "url": "https://github.com/rodluger/everest", + "rel": "/software/repository/github/rodluger/everest", + "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", + "description": "De-trending of K2 Light curves", "topics": [ - "diffusion", - "diffusion-models", - "equinox", - "jax", - "score-based-generative-modeling", - "score-based-generative-models" + "exoplanets", + "photometry", + "kepler", + "k2-light-curves", + "k2-data-science", + "exoplanet-transits" ] }, { - "uid": "github/homerjed/sbiax", - "url": "https://github.com/homerjed/sbiax", - "rel": "/software/repository/github/homerjed/sbiax", - "avatar": "https://avatars.githubusercontent.com/u/47306716?v=4", - "description": "Fast, lightweight and parallelised simulation-based inference in JAX.", + "uid": "github/rodluger/starry_process", + "url": "https://github.com/rodluger/starry_process", + "rel": "/software/repository/github/rodluger/starry_process", + "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", + "description": "interpretable gaussian processes for stellar light curves", "topics": [ - "generative-models", - "jax", - "normalizing-flows", - "simulation-based-inference" + "gaussian-processes", + "lightcurves", + "timeseries-analysis", + "stars" ] }, { - "uid": "github/damar-wicaksono/uqtestfuns", - "url": "https://github.com/damar-wicaksono/uqtestfuns", - "rel": "/software/repository/github/damar-wicaksono/uqtestfuns", - "avatar": "https://avatars.githubusercontent.com/u/5500067?v=4", - "description": "A Python3 library of test functions from the uncertainty quantification community with a common interface for validation and benchmarking purposes.", + "uid": "github/rodluger/planetplanet", + "url": "https://github.com/rodluger/planetplanet", + "rel": "/software/repository/github/rodluger/planetplanet", + "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", + "description": "A general photodynamical code for exoplanet light curves", "topics": [ - "python", - "uncertainty-quantification", - "metamodeling", - "sensitivity-analysis", - "test-functions", - "reliability-analysis" + "exoplanets", + "exoplanet-transits", + "light-curves", + "binary-stars", + "exomoons" ] }, { - "uid": "github/rossfadely/star-galaxy-classification", - "url": "https://github.com/rossfadely/star-galaxy-classification", - "rel": "/software/repository/github/rossfadely/star-galaxy-classification", - "avatar": "https://avatars.githubusercontent.com/u/1253511?v=4", - "description": "Classification of astronomical objects using photometry", + "uid": "github/rodluger/Limbdark.jl", + "url": "https://github.com/rodluger/Limbdark.jl", + "rel": "/software/repository/github/rodluger/Limbdark.jl", + "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", + "description": "Analytical transit light curves for limb darkened stars", "topics": [] }, { - "uid": "github/Beuth-Erdelt/DBMS-Benchmarker", - "url": "https://github.com/Beuth-Erdelt/DBMS-Benchmarker", - "rel": "/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", - "avatar": "https://avatars.githubusercontent.com/u/17198143?v=4", - "description": "DBMS-Benchmarker is a Python-based application-level blackbox benchmark tool for Database Management Systems (DBMS). It connects to a given list of DBMS (via JDBC) and runs a given list of parametrized and randomized (SQL) benchmark queries. Evaluations are available via a Python interface and on an interactive multi-dimensional dashboard.", - "topics": [ - "dbms", - "benchmarking", - "python", - "sql", - "jdbc", - "agplv3" - ] - }, - { - "uid": "github/SimCab-CHU/ifCNVR", - "url": "https://github.com/SimCab-CHU/ifCNV-R", - "rel": "/software/repository/github/SimCab-CHU/ifCNVR", - "avatar": "https://avatars.githubusercontent.com/u/70569769?v=4", - "description": "ifCNV R package", + "uid": "github/zoometh/iconr", + "url": "https://github.com/zoometh/iconr", + "rel": "/software/repository/github/zoometh/iconr", + "avatar": "https://avatars.githubusercontent.com/u/67924910?v=4", + "description": "Formal methods to study Prehistory iconography", "topics": [] }, { - "uid": "github/jts/nanopolish", - "url": "https://github.com/jts/nanopolish", - "rel": "/software/repository/github/jts/nanopolish", - "avatar": "https://avatars.githubusercontent.com/u/389535?v=4", - "description": "Signal-level algorithms for MinION data", - "topics": [ - "bioinformatics", - "genome-assembly", - "epigenetics", - "methylation", - "science", - "c-plus-plus" - ] - }, - { - "uid": "github/jts/sga", - "url": "https://github.com/jts/sga", - "rel": "/software/repository/github/jts/sga", - "avatar": "https://avatars.githubusercontent.com/u/389535?v=4", - "description": "de novo sequence assembler using string graphs", + "uid": "github/zhangzzk/forklens", + "url": "https://github.com/zhangzzk/forklens", + "rel": "/software/repository/github/zhangzzk/forklens", + "avatar": "https://avatars.githubusercontent.com/u/31132161?v=4", + "description": "DL weak lensing shear", "topics": [] }, { - "uid": "github/ajshajib/dolphin", - "url": "https://github.com/ajshajib/dolphin", - "rel": "/software/repository/github/ajshajib/dolphin", - "avatar": "https://avatars.githubusercontent.com/u/20169048?v=4", - "description": "Automated pipeline for lens modelling based on lenstronomy.", + "uid": "github/EnricoCorsaro/DIAMONDS", + "url": "https://github.com/EnricoCorsaro/DIAMONDS", + "rel": "/software/repository/github/EnricoCorsaro/DIAMONDS", + "avatar": "https://avatars.githubusercontent.com/u/23703395?v=4", + "description": "DIAMONDS (high-DImensional And multi-MOdal NesteD Sampling) - Bayesian Inference Software", "topics": [] }, { - "uid": "github/ajshajib/LensingETC", - "url": "https://github.com/ajshajib/LensingETC", - "rel": "/software/repository/github/ajshajib/LensingETC", - "avatar": "https://avatars.githubusercontent.com/u/20169048?v=4", - "description": "Lensing Exposure Time Calculator", + "uid": "github/EnricoCorsaro/FAMED", + "url": "https://github.com/EnricoCorsaro/FAMED", + "rel": "/software/repository/github/EnricoCorsaro/FAMED", + "avatar": "https://avatars.githubusercontent.com/u/23703395?v=4", + "description": "FAMED (Fast and AutoMated pEak bagging with DIAMONDS) - Pipeline", "topics": [] }, { - "uid": "github/metawards/MetaWards", - "url": "https://github.com/metawards/MetaWards", - "rel": "/software/repository/github/metawards/MetaWards", - "avatar": "https://avatars.githubusercontent.com/u/63117563?v=4", - "description": "MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling", - "topics": [ - "epidemiology", - "epidemic-simulations", - "sir-model", - "epidemiology-analysis", - "epidemic-model", - "epidemics", - "covid-19", - "covid", - "coronavirus" - ] + "uid": "github/paumard/cubefit", + "url": "https://github.com/paumard/cubefit", + "rel": "/software/repository/github/paumard/cubefit", + "avatar": "https://avatars.githubusercontent.com/u/620826?v=4", + "description": null, + "topics": [] }, { - "uid": "github/CompGenomeLab/boquila", - "url": "https://github.com/CompGenomeLab/boquila", - "rel": "/software/repository/github/CompGenomeLab/boquila", - "avatar": "https://avatars.githubusercontent.com/u/57796291?v=4", - "description": "NGS read simulator to eliminate read nucleotide bias in sequence analysis.", + "uid": "github/aikubo/LinkingLines", + "url": "https://github.com/aikubo/LinkingLines", + "rel": "/software/repository/github/aikubo/LinkingLines", + "avatar": "https://avatars.githubusercontent.com/u/51497688?v=4", + "description": "Link and Cluster Cartesian Line Segments", "topics": [] }, { - "uid": "github/LucaMalavolta/CCFpams", - "url": "https://github.com/LucaMalavolta/CCFpams", - "rel": "/software/repository/github/LucaMalavolta/CCFpams", - "avatar": "https://avatars.githubusercontent.com/u/15183346?v=4", - "description": "Atmospheric Stellar Parameters from Cross-Correlation Functions for HARPS & HARPS-N", + "uid": "github/mikekatz04/BOWIE", + "url": "https://github.com/mikekatz04/BOWIE", + "rel": "/software/repository/github/mikekatz04/BOWIE", + "avatar": "https://avatars.githubusercontent.com/u/23559239?v=4", + "description": "BOWIE - Binary Observability With Illustrative Exploration", "topics": [] }, { - "uid": "github/LucaMalavolta/PyORBIT", - "url": "https://github.com/LucaMalavolta/PyORBIT", - "rel": "/software/repository/github/LucaMalavolta/PyORBIT", - "avatar": "https://avatars.githubusercontent.com/u/15183346?v=4", - "description": "PyORBIT: a code for exoplanet orbital parameters and stellar activity.", + "uid": "github/regonzar/paravt", + "url": "https://github.com/regonzar/paravt", + "rel": "/software/repository/github/regonzar/paravt", + "avatar": "https://avatars.githubusercontent.com/u/6602575?v=4", + "description": "PARAVT: Parallel Voronoi Tessellation", "topics": [] }, { - "uid": "github/damask-multiphysics/DAMASK", - "url": "https://github.com/damask-multiphysics/DAMASK", - "rel": "/software/repository/github/damask-multiphysics/DAMASK", - "avatar": "https://avatars.githubusercontent.com/u/172325373?v=4", - "description": "D\u00fcsseldorf Advanced Material Simulation Kit (Read-only mirror)", + "uid": "github/GalSim-developers/GalSim", + "url": "https://github.com/GalSim-developers/GalSim", + "rel": "/software/repository/github/GalSim-developers/GalSim", + "avatar": "https://avatars.githubusercontent.com/u/1462196?v=4", + "description": "The modular galaxy image simulation toolkit. Documentation:", "topics": [ - "plasticity", - "engineering", - "physics", - "metallurgy", - "materials-science", - "crystal-plasticity", - "materials", - "science", - "multi-physics", - "material", - "simulation" + "python", + "c-plus-plus", + "astronomy", + "galaxy", + "simulation", + "simulate-images", + "weaklensing", + "lsst", + "des", + "wfirst", + "euclid" ] }, { - "uid": "github/xxsds/DYNAMIC", - "url": "https://github.com/xxsds/DYNAMIC", - "rel": "/software/repository/github/xxsds/DYNAMIC", - "avatar": "https://avatars.githubusercontent.com/u/17567160?v=4", - "description": "Dynamic succinct/compressed data structures", + "uid": "github/aimalz/qp", + "url": "https://github.com/aimalz/qp", + "rel": "/software/repository/github/aimalz/qp", + "avatar": "https://avatars.githubusercontent.com/u/8606810?v=4", + "description": "Quantile Parametrization for probability distribution functions module", "topics": [] }, { - "uid": "github/jruffio/breads", - "url": "https://github.com/jruffio/breads", - "rel": "/software/repository/github/jruffio/breads", - "avatar": "https://avatars.githubusercontent.com/u/14828518?v=4", - "description": "Broad Repository for Exoplanet Analysis and Discovery", + "uid": "github/baker-laboratory/RoseTTAFold-All-Atom", + "url": "https://github.com/baker-laboratory/RoseTTAFold-All-Atom", + "rel": "/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", + "avatar": "https://avatars.githubusercontent.com/u/117964973?v=4", + "description": "RoseTTAFold All-Atom is a biomolecular structure prediction neural network that can predict a broad range of biomolecular assemblies.", "topics": [] }, { - "uid": "github/delve-team/delve", - "url": "https://github.com/delve-team/delve", - "rel": "/software/repository/github/delve-team/delve", - "avatar": "https://avatars.githubusercontent.com/u/48019028?v=4", - "description": "PyTorch model training and layer saturation monitor", + "uid": "github/hpc-maths/samurai", + "url": "https://github.com/hpc-maths/samurai", + "rel": "/software/repository/github/hpc-maths/samurai", + "avatar": "https://avatars.githubusercontent.com/u/75079410?v=4", + "description": "Intervals coupled with algebra of set to handle adaptive mesh refinement and operators on it.", "topics": [ - "pytorch", - "model-training", - "training-monitor", - "layer-saturation", - "pruning", - "visualization", - "neural-dynamics", - "deep-learning", - "convolutional-neural-networks" + "adaptive-mesh-refinement", + "amr", + "cartesian", + "scientific-computing" ] }, { - "uid": "github/INCF/one_click", - "url": "https://github.com/INCF/one_click", - "rel": "/software/repository/github/INCF/one_click", - "avatar": "https://avatars.githubusercontent.com/u/758175?v=4", - "description": "One Click Sharing", + "uid": "github/tkarwal/procoli", + "url": "https://github.com/tkarwal/procoli", + "rel": "/software/repository/github/tkarwal/procoli", + "avatar": "https://avatars.githubusercontent.com/u/33636657?v=4", + "description": "Profiles of cosmological likelihoods: Code for extracting the 1D profile likelihood of a parameter using MontePython ", "topics": [] }, { - "uid": "github/Baohua-Chen/GFFx", - "url": "https://github.com/Baohua-Chen/GFFx", - "rel": "/software/repository/github/Baohua-Chen/GFFx", - "avatar": "https://avatars.githubusercontent.com/u/52615906?v=4", - "description": "A Rust-Based suite of utilities for ultra-fast genomic feature extraction", + "uid": "github/SCM-NV/qmflows", + "url": "https://github.com/SCM-NV/qmflows", + "rel": "/software/repository/github/SCM-NV/qmflows", + "avatar": "https://avatars2.githubusercontent.com/u/17591901?v=4", + "description": "This library tackles the construction and efficient execution of computational chemistry workflows", + "topics": [ + "quantum-mechanics", + "science", + "bioinformatics", + "chemistry", + "automation", + "python-3", + "materials", + "scientific-workflows" + ] + }, + { + "uid": "github/SCM-NV/pyZacros", + "url": "https://github.com/SCM-NV/pyZacros", + "rel": "/software/repository/github/SCM-NV/pyZacros", + "avatar": "https://avatars.githubusercontent.com/u/17591901?v=4", + "description": "Python library to handle KMC codes.", "topics": [] }, { - "uid": "github/qutip/qutip", - "url": "https://github.com/qutip/qutip", - "rel": "/software/repository/github/qutip/qutip", - "avatar": "https://avatars0.githubusercontent.com/u/2517630?v=4", - "description": "QuTiP: Quantum Toolbox in Python", + "uid": "github/SCM-NV/qmflows-namd", + "url": "https://github.com/SCM-NV/nano-qmflows", + "rel": "/software/repository/github/SCM-NV/qmflows-namd", + "avatar": "https://avatars2.githubusercontent.com/u/17591901?v=4", + "description": "Package containing several workflows to compute molecular properties for nanomaterials", "topics": [ - "qutip", - "python", - "quantum-toolbox", - "quantum", - "quantum-computing", - "quantum-mechanics", - "quantum-information", - "quantum-optics" + "science", + "chemistry", + "physics", + "materials", + "quantum-chemistry", + "scientific-workflows", + "nanomaterials" ] }, { - "uid": "github/ExoSim/ExoSimPublic", - "url": "https://github.com/ExoSim/ExoSimPublic", - "rel": "/software/repository/github/ExoSim/ExoSimPublic", - "avatar": "https://avatars.githubusercontent.com/u/9990672?v=4", - "description": null, - "topics": [] + "uid": "github/cbalbin-FIU/Epitopedia", + "url": "https://github.com/cbalbin-bio/Epitopedia", + "rel": "/software/repository/github/cbalbin-FIU/Epitopedia", + "avatar": "https://avatars.githubusercontent.com/u/76659347?v=4", + "description": "Epitopedia: identifying molecular mimicry of known immune epitopes", + "topics": [ + "bioinformatics", + "computational-biology", + "structural-biology", + "molecular-mimicry", + "epitopes", + "iedb", + "pdb", + "drug-repurposing" + ] }, { - "uid": "github/PaulKuin/uvotpy", - "url": "https://github.com/PaulKuin/uvotpy", - "rel": "/software/repository/github/PaulKuin/uvotpy", - "avatar": "https://avatars.githubusercontent.com/u/5159688?v=4", - "description": "Swift UVOT grisms - spectral extraction", + "uid": "github/rdpstaff/TaxonomyTree", + "url": "https://github.com/rdpstaff/TaxonomyTree", + "rel": "/software/repository/github/rdpstaff/TaxonomyTree", + "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", + "description": "TaxonomyTree building and traversal utility classes.", "topics": [] }, { - "uid": "github/baiyueh/PANINIpy", - "url": "https://github.com/baiyueh/PANINIpy", - "rel": "/software/repository/github/baiyueh/PANINIpy", - "avatar": "https://avatars.githubusercontent.com/u/92152405?v=4", - "description": "PANINIpy: Package of Algorithms for Nonparametric Inference with Networks in Python", + "uid": "github/rdpstaff/classifier", + "url": "https://github.com/rdpstaff/classifier", + "rel": "/software/repository/github/rdpstaff/classifier", + "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", + "description": "RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s", "topics": [] }, { - "uid": "github/aothmane-control/Algebraic-differentiators", - "url": "https://github.com/aothmane-control/Algebraic-differentiators", - "rel": "/software/repository/github/aothmane-control/Algebraic-differentiators", - "avatar": "https://avatars.githubusercontent.com/u/22243006?v=4", - "description": "A Python class implementing all necessary tools for the design, analysis, and discretization of algebraic differentiators. An interface to Matlab is also provided.", + "uid": "github/rdpstaff/AlignmentTools", + "url": "https://github.com/rdpstaff/AlignmentTools", + "rel": "/software/repository/github/rdpstaff/AlignmentTools", + "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", + "description": "Tools for pairwise sequence comparison, distance calculation, and hidden markov model sequence scoring (using HMMER3 models). Many RDP Projects require this package.", "topics": [] }, { - "uid": "github/AlexMaraio/WeakLensingQML", - "url": "https://github.com/AlexMaraio/WeakLensingQML", - "rel": "/software/repository/github/AlexMaraio/WeakLensingQML", - "avatar": "https://avatars.githubusercontent.com/u/9391958?v=4", - "description": "Code applying the Quadratic Maximum Likelihood estimator to Weak Lensing", + "uid": "github/rdpstaff/ReadSeq", + "url": "https://github.com/rdpstaff/ReadSeq", + "rel": "/software/repository/github/rdpstaff/ReadSeq", + "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", + "description": "Java based common sequence file format reader and sequence file manipulation. Most RDP projects require this package.", "topics": [] }, { - "uid": "github/alexandercoulter/fastfrechet", - "url": "https://github.com/alexandercoulter/fastfrechet", - "rel": "/software/repository/github/alexandercoulter/fastfrechet", - "avatar": "https://avatars.githubusercontent.com/u/67101356?v=4", + "uid": "github/esperlman/JetCurry", + "url": "https://github.com/esperlman/JetCurry", + "rel": "/software/repository/github/esperlman/JetCurry", + "avatar": "https://avatars.githubusercontent.com/u/19291620?v=4", "description": null, "topics": [] }, { - "uid": "github/mlr-org/mcboost", - "url": "https://github.com/mlr-org/mcboost", - "rel": "/software/repository/github/mlr-org/mcboost", - "avatar": "https://avatars.githubusercontent.com/u/12941794?v=4", - "description": "Multi-Calibration & Multi-Accuracy Boosting for R", + "uid": "github/dunnkers/fseval", + "url": "https://github.com/dunnkers/fseval", + "rel": "/software/repository/github/dunnkers/fseval", + "avatar": "https://avatars.githubusercontent.com/u/744430?v=4", + "description": "Benchmarking framework for Feature Selection and Feature Ranking algorithms \ud83d\ude80", "topics": [ + "benchmarks", + "feature-rankers", + "feature-selection", + "wandb", + "hydra", "machine-learning", - "classification", - "fairness", - "fairness-ml", - "fairness-ai", - "responsible-ai", - "bias-correction", - "bias-detection", - "post-processing", - "ethics" + "python", + "feature-ranking", + "benchmarking", + "benchmarking-framework", + "scikit-learn", + "automl" ] }, { - "uid": "github/KCL-BMEIS/NiftySeg", - "url": "https://github.com/KCL-BMEIS/NiftySeg", - "rel": "/software/repository/github/KCL-BMEIS/NiftySeg", - "avatar": "https://avatars.githubusercontent.com/u/39486397?v=4", - "description": "contains programs to perform EM based segmentation of images in nifti or analyse format.", - "topics": [] - }, - { - "uid": "github/predsci/OFT", - "url": "https://github.com/predsci/OFT", - "rel": "/software/repository/github/predsci/OFT", - "avatar": "https://avatars.githubusercontent.com/u/8443402?v=4", - "description": "Open Source Flux Transport", - "topics": [] + "uid": "github/auctus-team/pycapacity", + "url": "https://github.com/auctus-team/pycapacity", + "rel": "/software/repository/github/auctus-team/pycapacity", + "avatar": "https://avatars.githubusercontent.com/u/125655421?v=4", + "description": "An efficient task-space capacity calculation package for robotics and biomechanics", + "topics": [ + "biomechanics", + "linear-algebra", + "polytope", + "robotics", + "pip-package", + "real-time" + ] }, { - "uid": "github/predsci/hipft", - "url": "https://github.com/predsci/HipFT", - "rel": "/software/repository/github/predsci/hipft", - "avatar": "https://avatars.githubusercontent.com/u/8443402?v=4", - "description": "High-performance Flux Transport", + "uid": "github/damask-multiphysics/DAMASK", + "url": "https://github.com/damask-multiphysics/DAMASK", + "rel": "/software/repository/github/damask-multiphysics/DAMASK", + "avatar": "https://avatars.githubusercontent.com/u/172325373?v=4", + "description": "D\u00fcsseldorf Advanced Material Simulation Kit (Read-only mirror)", "topics": [ - "gpu", - "magnetogram", - "stdpar", - "flux-transport", - "do-concurrent", - "fortran", - "gpgpu", - "openmp", - "openmp-target", - "solar-physics", - "standard-parallelism" + "plasticity", + "engineering", + "physics", + "metallurgy", + "materials-science", + "crystal-plasticity", + "materials", + "science", + "multi-physics", + "material", + "simulation" ] }, { - "uid": "github/joshspeagle/dynesty", - "url": "https://github.com/joshspeagle/dynesty", - "rel": "/software/repository/github/joshspeagle/dynesty", - "avatar": "https://avatars.githubusercontent.com/u/13280133?v=4", - "description": "Dynamic Nested Sampling package for computing Bayesian posteriors and evidences", + "uid": "github/palumbom/grass", + "url": "https://github.com/palumbom/GRASS", + "rel": "/software/repository/github/palumbom/grass", + "avatar": "https://avatars.githubusercontent.com/u/19910419?v=4", + "description": "A testbed for stellar granulation in exoplanet RV searches. ", "topics": [ - "nested-sampling", - "pure-python", - "mit-license", - "bayesian-inference", - "monte-carlo", - "model-selection" + "exoplanets", + "radial-velocities", + "granulation", + "stellar-variability", + "astronomy-software" ] }, { - "uid": "github/METHODS-Group/DRDMannTurb", - "url": "https://github.com/METHODS-Group/DRDMannTurb", - "rel": "/software/repository/github/METHODS-Group/DRDMannTurb", - "avatar": "https://avatars.githubusercontent.com/u/153120691?v=4", - "description": null, + "uid": "github/duducosmos/pycosmicstar", + "url": "https://github.com/duducosmos/pycosmicstar", + "rel": "/software/repository/github/duducosmos/pycosmicstar", + "avatar": "https://avatars.githubusercontent.com/u/588188?v=4", + "description": "The Cosmic Star Formation Rate Model", "topics": [] }, { - "uid": "github/zclaytor/butterpy", - "url": "https://github.com/zclaytor/butterpy", - "rel": "/software/repository/github/zclaytor/butterpy", - "avatar": "https://avatars.githubusercontent.com/u/32207846?v=4", - "description": "Python simulations of stellar butterfly diagrams and rotational light curves", + "uid": "github/CoolWorlds/ExoPriors", + "url": "https://github.com/CoolWorlds/ExoPriors", + "rel": "/software/repository/github/CoolWorlds/ExoPriors", + "avatar": "https://avatars.githubusercontent.com/u/12749277?v=4", + "description": "Calculate log-likelihood penalties to account for observational bias in exoplanet detection.", "topics": [] }, { - "uid": "github/zclaytor/kiauhoku", - "url": "https://github.com/zclaytor/kiauhoku", - "rel": "/software/repository/github/zclaytor/kiauhoku", - "avatar": "https://avatars.githubusercontent.com/u/32207846?v=4", - "description": "Python utilities for stellar model grid interpolation", + "uid": "github/CoolWorlds/exoinformatics", + "url": "https://github.com/CoolWorlds/exoinformatics", + "rel": "/software/repository/github/CoolWorlds/exoinformatics", + "avatar": "https://avatars.githubusercontent.com/u/12749277?v=4", + "description": null, "topics": [] }, { - "uid": "github/stefanoMP/massiveGST", - "url": "https://github.com/stefanoMP/massiveGST", - "rel": "/software/repository/github/stefanoMP/massiveGST", - "avatar": "https://avatars.githubusercontent.com/u/18364052?v=4", - "description": null, + "uid": "github/ndaniel/fusioncatcher", + "url": "https://github.com/ndaniel/fusioncatcher", + "rel": "/software/repository/github/ndaniel/fusioncatcher", + "avatar": "https://avatars.githubusercontent.com/u/161419?v=4", + "description": "Finder of Somatic Fusion Genes in RNA-seq data", + "topics": [ + "rna-seq", + "fusion-genes", + "somatic-fusion-genes" + ] + }, + { + "uid": "github/TPI-Immunogenetics/igmat", + "url": "https://github.com/TPI-Immunogenetics/igmat", + "rel": "/software/repository/github/TPI-Immunogenetics/igmat", + "avatar": "https://avatars.githubusercontent.com/u/87307668?v=4", + "description": "Antibody Multispecies Annotation Tool", "topics": [] }, { - "uid": "github/markusbonse/applefy", - "url": "https://github.com/markusbonse/applefy", - "rel": "/software/repository/github/markusbonse/applefy", - "avatar": "https://avatars.githubusercontent.com/u/19818846?v=4", - "description": "A Python package for calculating detection limits for exoplanet high contrast imaging (HCI) datasets.", + "uid": "github/humanfactors/FIPS", + "url": "https://github.com/humanfactors/FIPS", + "rel": "/software/repository/github/humanfactors/FIPS", + "avatar": "https://avatars2.githubusercontent.com/u/16096044?v=4", + "description": "The Fatigue Impairment Prediction Suite (for R)", "topics": [ - "bootstrap", - "direct-imaging", - "exoplanet-detection", - "exoplanets", - "high-contrast-imaging", - "python" + "r", + "rstats", + "fatigue", + "human-factors", + "biomathematics" ] }, { - "uid": "github/inpefess/gym-saturation", - "url": "https://github.com/inpefess/gym-saturation", - "rel": "/software/repository/github/inpefess/gym-saturation", - "avatar": "https://avatars.githubusercontent.com/u/1696493?v=4", - "description": "an OpenAI Gym environment for saturation provers", + "uid": "github/FlorianThibord/OptimiR", + "url": "https://github.com/FlorianThibord/OptimiR", + "rel": "/software/repository/github/FlorianThibord/OptimiR", + "avatar": "https://avatars.githubusercontent.com/u/1457469?v=4", + "description": "miRSeq data alignment workflow - integrates genetic information to assess the impact of variants on miRNA expression", "topics": [] }, { - "uid": "github/masoncarney/stepped_luneburg", - "url": "https://github.com/masoncarney/stepped_luneburg", - "rel": "/software/repository/github/masoncarney/stepped_luneburg", - "avatar": "https://avatars.githubusercontent.com/u/39119090?v=4", - "description": "Modeling of a stepped Luneburg lens for all-sky surveys", + "uid": "github/ocxtal/minialign", + "url": "https://github.com/ocxtal/minialign", + "rel": "/software/repository/github/ocxtal/minialign", + "avatar": "https://avatars.githubusercontent.com/u/16234240?v=4", + "description": "[IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads", "topics": [] }, { - "uid": "github/ccsb-scripps/Illustrate", - "url": "https://github.com/ccsb-scripps/Illustrate", - "rel": "/software/repository/github/ccsb-scripps/Illustrate", - "avatar": "https://avatars.githubusercontent.com/u/47901817?v=4", - "description": "Biomolecular Illustration Tool", + "uid": "github/bartongroup/yanosim", + "url": "https://github.com/bartongroup/yanosim", + "rel": "/software/repository/github/bartongroup/yanosim", + "avatar": "https://avatars.githubusercontent.com/u/7642366?v=4", + "description": "Nanopore DRS read simulator", "topics": [] }, { - "uid": "github/ComplexGroupInteractions/xgi", - "url": "https://github.com/xgi-org/xgi", - "rel": "/software/repository/github/ComplexGroupInteractions/xgi", - "avatar": "https://avatars.githubusercontent.com/u/85237625?v=4", - "description": "CompleX Group Interactions (XGI) provides an ecosystem for the analysis and representation of complex systems with group interactions.", - "topics": [ - "hypergraphs" - ] + "uid": "github/bartongroup/RoSA", + "url": "https://github.com/bartongroup/RoSA", + "rel": "/software/repository/github/bartongroup/RoSA", + "avatar": "https://avatars.githubusercontent.com/u/7642366?v=4", + "description": "Antisense analysis scripts", + "topics": [] }, { - "uid": "github/karel-brinda/ococo", - "url": "https://github.com/karel-brinda/ococo", - "rel": "/software/repository/github/karel-brinda/ococo", - "avatar": "https://avatars.githubusercontent.com/u/8779046?v=4", - "description": "Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.", + "uid": "github/jluastro/PopSyCLE", + "url": "https://github.com/jluastro/PopSyCLE", + "rel": "/software/repository/github/jluastro/PopSyCLE", + "avatar": "https://avatars.githubusercontent.com/u/1459392?v=4", + "description": "Population Synthesis for Compact-object Lensing Events", + "topics": [] + }, + { + "uid": "github/sybila/biodivine-aeon-py", + "url": "https://github.com/sybila/biodivine-aeon-py", + "rel": "/software/repository/github/sybila/biodivine-aeon-py", + "avatar": "https://avatars.githubusercontent.com/u/748023?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/redcap-tools/PyCap", + "url": "https://github.com/redcap-tools/PyCap", + "rel": "/software/repository/github/redcap-tools/PyCap", + "avatar": "https://avatars.githubusercontent.com/u/14996753?v=4", + "description": "REDCap in Python", "topics": [ - "ngs", - "variant-calling", - "online-algorithms", - "bioinformatics", - "consensus" + "redcap", + "python", + "redcap-api", + "redcap-package" ] }, { - "uid": "github/GoelandProver/Goeland", - "url": "https://github.com/GoelandProver/Goeland", - "rel": "/software/repository/github/GoelandProver/Goeland", - "avatar": "https://avatars.githubusercontent.com/u/99547210?v=4", - "description": "A first-order concurrent automated theorem prover", + "uid": "github/taranu/AllStarFit", + "url": "https://github.com/taranu/AllStarFit", + "rel": "/software/repository/github/taranu/AllStarFit", + "avatar": "https://avatars.githubusercontent.com/u/10129954?v=4", + "description": "Experimental R package for source detection, PSF and multi-component galaxy fitting", "topics": [] }, { - "uid": "github/synchrofit/synchrofit", - "url": "https://github.com/synchrofit/synchrofit", - "rel": "/software/repository/github/synchrofit/synchrofit", - "avatar": "https://avatars.githubusercontent.com/u/79506129?v=4", - "description": "Code for modelling a radio spectrum using the JP, KP or CI models. ", + "uid": "github/DamynChipman/EllipticForest", + "url": "https://github.com/DamynChipman/EllipticForest", + "rel": "/software/repository/github/DamynChipman/EllipticForest", + "avatar": "https://avatars.githubusercontent.com/u/26394601?v=4", + "description": "A Direct Solver for Elliptic Partial Differential Equations on a Forest of Quadtree Meshes", "topics": [] }, { - "uid": "github/cweniger/swordfish", - "url": "https://github.com/cweniger/swordfish", - "rel": "/software/repository/github/cweniger/swordfish", - "avatar": "https://avatars.githubusercontent.com/u/2024084?v=4", - "description": "A Python tool to study the information yield of counting experiments.", + "uid": "github/dcouvin/CRISPRCasFinder", + "url": "https://github.com/dcouvin/CRISPRCasFinder", + "rel": "/software/repository/github/dcouvin/CRISPRCasFinder", + "avatar": "https://avatars.githubusercontent.com/u/12830930?v=4", + "description": "A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences", "topics": [] }, { - "uid": "github/sblunt/orbitize", - "url": "https://github.com/sblunt/orbitize", - "rel": "/software/repository/github/sblunt/orbitize", - "avatar": "https://avatars.githubusercontent.com/u/20113975?v=4", - "description": "Orbit-fitting for directly imaged objects", + "uid": "github/tidymess-code/tidymess", + "url": "https://github.com/tidymess-code/tidymess", + "rel": "/software/repository/github/tidymess-code/tidymess", + "avatar": "https://avatars.githubusercontent.com/u/129500042?v=4", + "description": "Tidal Dynamics of Multi-body ExtraSolar Systems", "topics": [] }, { - "uid": "github/hveerten/katu", - "url": "https://github.com/hveerten/katu", - "rel": "/software/repository/github/hveerten/katu", - "avatar": "https://avatars.githubusercontent.com/u/7522566?v=4", - "description": null, + "uid": "github/arq5x/lumpy-sv", + "url": "https://github.com/arq5x/lumpy-sv", + "rel": "/software/repository/github/arq5x/lumpy-sv", + "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", + "description": "lumpy: a general probabilistic framework for structural variant discovery", "topics": [] }, { - "uid": "github/hveerten/boxfit", - "url": "https://github.com/hveerten/boxfit", - "rel": "/software/repository/github/hveerten/boxfit", - "avatar": "https://avatars.githubusercontent.com/u/7522566?v=4", - "description": "boxfit, a gamma-ray burst afterglow light curve generator based on two-dimensional hydrodynamics simulations", + "uid": "github/arq5x/poretools", + "url": "https://github.com/arq5x/poretools", + "rel": "/software/repository/github/arq5x/poretools", + "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", + "description": "a toolkit for working with Oxford nanopore data", "topics": [] }, { - "uid": "github/cheginit/HyRiver", - "url": "https://github.com/cheginit/HyRiver", - "rel": "/software/repository/github/cheginit/HyRiver", - "avatar": "https://avatars.githubusercontent.com/u/13016644?v=4", - "description": "A Python software stack for retrieving hydroclimate data from web services.", - "topics": [ - "python", - "webservice", - "hydrology", - "climate", - "data" - ] + "uid": "github/arq5x/bedtools2", + "url": "https://github.com/arq5x/bedtools2", + "rel": "/software/repository/github/arq5x/bedtools2", + "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", + "description": "bedtools - the swiss army knife for genome arithmetic", + "topics": [] }, { - "uid": "github/jakeown/astroclover", - "url": "https://github.com/jakeown/astroclover", - "rel": "/software/repository/github/jakeown/astroclover", - "avatar": "https://avatars.githubusercontent.com/u/16109704?v=4", - "description": "Convnet Line-fitting Of Velocities in Emission-line Regions (CLOVER)", + "uid": "github/arq5x/grabix", + "url": "https://github.com/arq5x/grabix", + "rel": "/software/repository/github/arq5x/grabix", + "avatar": "https://avatars.githubusercontent.com/u/72291?v=4", + "description": " a wee tool for random access into BGZF files.", "topics": [] }, { - "uid": "github/cochran4/GEMB", - "url": "https://github.com/cochran4/GEMB", - "rel": "/software/repository/github/cochran4/GEMB", - "avatar": "https://avatars3.githubusercontent.com/u/47640953?v=4", - "description": "Gene-set enrichment with math biology", + "uid": "github/gigjozsa/tirific", + "url": "https://github.com/gigjozsa/tirific", + "rel": "/software/repository/github/gigjozsa/tirific", + "avatar": "https://avatars.githubusercontent.com/u/8706644?v=4", + "description": "Tilted-Ring-Fitting-Code", "topics": [] }, { - "uid": "github/0satoken/Eclairs", - "url": "https://github.com/0satoken/Eclairs", - "rel": "/software/repository/github/0satoken/Eclairs", - "avatar": "https://avatars.githubusercontent.com/u/9446410?v=4", - "description": "Efficient Codes for the LArge scales of the unIveRSe", + "uid": "github/DReichLab/EIG", + "url": "https://github.com/DReichLab/EIG", + "rel": "/software/repository/github/DReichLab/EIG", + "avatar": "https://avatars.githubusercontent.com/u/11320607?v=4", + "description": "The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006).", "topics": [] }, { - "uid": "github/gsuissa/hardCORE", - "url": "https://github.com/gsuissa/hardCORE", - "rel": "/software/repository/github/gsuissa/hardCORE", - "avatar": "https://avatars.githubusercontent.com/u/31299942?v=4", + "uid": "github/PathoGenOmics-Lab/get_mnv", + "url": "https://github.com/PathoGenOmics-Lab/get_MNV", + "rel": "/software/repository/github/PathoGenOmics-Lab/get_mnv", + "avatar": "https://avatars.githubusercontent.com/u/134300128?v=4", + "description": "Identifies multiple SNVs within the same codon, reclassifies them as MNVs, and accurately computes resulting amino acid changes from genomic reads", + "topics": [ + "mnv", + "snv", + "annotation", + "bam", + "rust", + "snp", + "vcf" + ] + }, + { + "uid": "github/IFCA-Advanced-Computing/FAIR_eva", + "url": "https://github.com/IFCA-Advanced-Computing/FAIR_eva", + "rel": "/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", + "avatar": "https://avatars.githubusercontent.com/u/2565514?v=4", "description": null, "topics": [] }, { - "uid": "github/DrJieZheng/meanoffset", - "url": "https://github.com/DrJieZheng/meanoffset", - "rel": "/software/repository/github/DrJieZheng/meanoffset", - "avatar": "https://avatars.githubusercontent.com/u/168158969?v=4", + "uid": "github/pydemull/activAnalyzer", + "url": "https://github.com/pydemull/activAnalyzer", + "rel": "/software/repository/github/pydemull/activAnalyzer", + "avatar": "https://avatars.githubusercontent.com/u/63407978?v=4", "description": null, - "topics": [] + "topics": [ + "app", + "shiny", + "actigraph", + "monitor", + "accelerometer", + "r" + ] }, { - "uid": "github/phirling/pyc2ray", - "url": "https://github.com/phirling/pyc2ray", - "rel": "/software/repository/github/phirling/pyc2ray", - "avatar": "https://avatars.githubusercontent.com/u/90903147?v=4", - "description": "Python interface to C2Ray, with GPU-acceleration", + "uid": "github/andr1976/HydDown", + "url": "https://github.com/andr1976/HydDown", + "rel": "/software/repository/github/andr1976/HydDown", + "avatar": "https://avatars.githubusercontent.com/u/58475535?v=4", + "description": "Hydrogen (or other pure gas phase species) depressurization calculations", "topics": [ - "21cm", - "cosmology", - "reionization", - "radiative-transfer" + "heat-transfer", + "coolprop", + "pressure", + "gas-phase", + "relief-valve", + "blow-down", + "depressurisation", + "python", + "thermodynamics" ] }, { - "uid": "github/AP6YC/AdaptiveResonance.jl", - "url": "https://github.com/AP6YC/AdaptiveResonance.jl", - "rel": "/software/repository/github/AP6YC/AdaptiveResonance.jl", - "avatar": "https://avatars.githubusercontent.com/u/17498866?v=4", - "description": "A Julia package for Adaptive Resonance Theory (ART) algorithms.", + "uid": "github/bioexcel/biobb_wf_flexdyn", + "url": "https://github.com/bioexcel/biobb_wf_flexdyn", + "rel": "/software/repository/github/bioexcel/biobb_wf_flexdyn", + "avatar": "https://avatars.githubusercontent.com/u/15978232?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/li-yangyang/lotus", + "url": "https://github.com/Li-Yangyang/LOTUS", + "rel": "/software/repository/github/li-yangyang/lotus", + "avatar": "https://avatars.githubusercontent.com/u/20237054?v=4", + "description": "Fast tool for 1D Non-LTE stellar parameter determination via Equivalent Width method", "topics": [ - "julia", - "machine-learning" + "python3", + "radiative-transfer", + "radiative-transfer-models", + "non-local-thermodynamic-equilibrium", + "stellar-physics", + "astronomy", + "astrophysics", + "spectral-analysis", + "spectroscopy", + "mcmc" ] }, { - "uid": "github/AP6YC/ClusterValidityIndices.jl", - "url": "https://github.com/AP6YC/ClusterValidityIndices.jl", - "rel": "/software/repository/github/AP6YC/ClusterValidityIndices.jl", - "avatar": "https://avatars.githubusercontent.com/u/17498866?v=4", - "description": "A Julia package for Cluster Validity Indices (CVIs).", + "uid": "github/NIFTy-PPL/JAXbind", + "url": "https://github.com/NIFTy-PPL/JAXbind", + "rel": "/software/repository/github/NIFTy-PPL/JAXbind", + "avatar": "https://avatars.githubusercontent.com/u/151748361?v=4", + "description": "Bind any function written in another language to JAX with support for JVP/VJP/batching/jit compilation", "topics": [] }, { - "uid": "github/ArtRand/signalAlign", - "url": "https://github.com/ArtRand/signalAlign", - "rel": "/software/repository/github/ArtRand/signalAlign", - "avatar": "https://avatars.githubusercontent.com/u/8851152?v=4", - "description": "HMM-HDP models for MinION signal alignments", + "uid": "github/martinlackner/abcvoting", + "url": "https://github.com/martinlackner/abcvoting", + "rel": "/software/repository/github/martinlackner/abcvoting", + "avatar": "https://avatars.githubusercontent.com/u/46762723?v=4", + "description": "Python implementations of approval-based committee (multi-winner) voting rules", + "topics": [ + "voting", + "python", + "research", + "social-choice", + "social-choice-theory", + "multiwinnervoting", + "approval-voting", + "voting-methods", + "committee" + ] + }, + { + "uid": "github/lime-rt/lime", + "url": "https://github.com/lime-rt/lime", + "rel": "/software/repository/github/lime-rt/lime", + "avatar": "https://avatars.githubusercontent.com/u/12966606?v=4", + "description": "Line Modeling Engine", "topics": [] }, { - "uid": "github/ycwu1030/EvoEMD", - "url": "https://github.com/ycwu1030/EvoEMD", - "rel": "/software/repository/github/ycwu1030/EvoEMD", - "avatar": "https://avatars.githubusercontent.com/u/39174521?v=4", - "description": "Evolution with an Early Matter-Dominated era", + "uid": "github/imperialchem/mrd-demo", + "url": "https://github.com/imperialchem/mrd-demo", + "rel": "/software/repository/github/imperialchem/mrd-demo", + "avatar": "https://avatars.githubusercontent.com/u/9826134?v=4", + "description": "Demonstration of classical molecular reaction dynamics for a tri-atomic system", "topics": [] }, { - "uid": "github/lantunes/cellpylib", - "url": "https://github.com/lantunes/cellpylib", - "rel": "/software/repository/github/lantunes/cellpylib", - "avatar": "https://avatars.githubusercontent.com/u/788494?v=4", - "description": "A library for working with Cellular Automata, for Python.", + "uid": "github/syasini/AstroPaint", + "url": "https://github.com/syasini/AstroPaint", + "rel": "/software/repository/github/syasini/AstroPaint", + "avatar": "https://avatars0.githubusercontent.com/u/47579697?v=4", + "description": "A python package for creating mock maps of astrophysical signals from a halo catalog", "topics": [ - "cellular-automata", - "complexity", - "complex-systems", - "nonlinear-dynamics", - "computation" + "cosmology", + "astrophysical-signals", + "halo-catalog", + "python", + "simulation-toolkit" ] }, { - "uid": "github/AlexanderJuestel/pyheatdemand", - "url": "https://github.com/AlexanderJuestel/pyheatdemand", - "rel": "/software/repository/github/AlexanderJuestel/pyheatdemand", - "avatar": "https://avatars.githubusercontent.com/u/45469915?v=4", - "description": "Processing Tool for Heat Demand Data", - "topics": [ - "geospatial-data", - "geospatial-data-analysis", - "heatmaps", - "spatial-data", - "spatial-data-analysis" - ] + "uid": "github/benyhh/ml-telescope-pointing-correction", + "url": "https://github.com/benyhh/ml-telescope-pointing-correction", + "rel": "/software/repository/github/benyhh/ml-telescope-pointing-correction", + "avatar": "https://avatars.githubusercontent.com/u/59779138?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Aravind-Sundararajan/MocoExtendProblem", - "url": "https://github.com/Aravind-Sundararajan/MocoExtendProblem", - "rel": "/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", - "avatar": "https://avatars.githubusercontent.com/u/26929285?v=4", - "description": "this is an example of how to add custom Moco goals to existing matlab scripts instead of constructing an omoco file or porting your existing matlab code to c++", - "topics": [] + "uid": "github/kylejgillett/sounderpy", + "url": "https://github.com/kylejgillett/sounderpy", + "rel": "/software/repository/github/kylejgillett/sounderpy", + "avatar": "https://avatars.githubusercontent.com/u/100786530?v=4", + "description": "SounderPy is an open-source Python package for retrieving, processing, and visualizing atmospheric sounding data.", + "topics": [ + "data-analysis-python", + "meteorology", + "python", + "weather", + "weather-data", + "atmospheric-science", + "atmospheric-sciences" + ] }, { - "uid": "github/sjbeckett/localcovid19now", - "url": "https://github.com/sjbeckett/localcovid19now", - "rel": "/software/repository/github/sjbeckett/localcovid19now", - "avatar": "https://avatars.githubusercontent.com/u/4902758?v=4", - "description": "processing and mapping COVID-19 case data at subnational scales", + "uid": "github/anchal-009/SAVED21cm", + "url": "https://github.com/anchal-009/SAVED21cm", + "rel": "/software/repository/github/anchal-009/SAVED21cm", + "avatar": "https://avatars.githubusercontent.com/u/79319338?v=4", + "description": "A toolbox for extracting the 21cm signal from the simulated mock observation for REACH.", "topics": [] }, { - "uid": "github/graphnet-team/graphnet", - "url": "https://github.com/graphnet-team/graphnet", - "rel": "/software/repository/github/graphnet-team/graphnet", - "avatar": "https://avatars.githubusercontent.com/u/113602637?v=4", - "description": "Graph neural networks for neutrino telescope event reconstruction", + "uid": "github/sxs-collaboration/gwsurrogate", + "url": "https://github.com/sxs-collaboration/gwsurrogate", + "rel": "/software/repository/github/sxs-collaboration/gwsurrogate", + "avatar": "https://avatars.githubusercontent.com/u/26882595?v=4", + "description": "An easy to use interface to gravitational wave surrogate models", "topics": [ - "astrophysics", - "deep-learning", - "gpu", - "high-energy-physics", - "machine-learning", - "neural-network", - "particle-physics", - "physics-analysis", + "surrogate-models", "python", - "pytorch", - "neutrino-oscillations", - "neutrino-physics", - "neutrinos", - "graph-neural-network" + "gravitational-waveforms" ] }, { - "uid": "github/sims-lab/CapCruncher", - "url": "https://github.com/sims-lab/CapCruncher", - "rel": "/software/repository/github/sims-lab/CapCruncher", - "avatar": "https://avatars.githubusercontent.com/u/52532825?v=4", - "description": "Analysis tool for NG-Capture-C, Tri-C and Tiled-C data", + "uid": "github/sxs-collaboration/spectre", + "url": "https://github.com/sxs-collaboration/spectre", + "rel": "/software/repository/github/sxs-collaboration/spectre", + "avatar": "https://avatars.githubusercontent.com/u/26882595?v=4", + "description": "SpECTRE is a code for multi-scale, multi-physics problems in astrophysics and gravitational physics.", "topics": [] }, { - "uid": "github/biolab-unige/nifti2dicom", - "url": "https://github.com/biolab-unige/nifti2dicom", - "rel": "/software/repository/github/biolab-unige/nifti2dicom", - "avatar": "https://avatars.githubusercontent.com/u/1324907?v=4", - "description": "Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series", + "uid": "github/karlropkins/AQEval", + "url": "https://github.com/karlropkins/AQEval", + "rel": "/software/repository/github/karlropkins/AQEval", + "avatar": "https://avatars.githubusercontent.com/u/22469070?v=4", + "description": "R code for Air Quality Evaluation ", "topics": [] }, { - "uid": "github/rkingsbury/pyEQL", - "url": "https://github.com/KingsburyLab/pyEQL", - "rel": "/software/repository/github/rkingsbury/pyEQL", - "avatar": "https://avatars.githubusercontent.com/u/107872527?v=4", - "description": "A Python library for solution chemistry", - "topics": [] + "uid": "github/robbievanleeuwen/section-properties", + "url": "https://github.com/robbievanleeuwen/section-properties", + "rel": "/software/repository/github/robbievanleeuwen/section-properties", + "avatar": "https://avatars.githubusercontent.com/u/18841910?v=4", + "description": "Analysis of an arbitrary cross-section in python using the finite element method.", + "topics": [ + "structural-engineering", + "finite-element-analysis", + "finite-element-method", + "computational-mechanics", + "python", + "cross-section", + "stress-analysis" + ] }, { - "uid": "github/devsim/devsim", - "url": "https://github.com/devsim/devsim", - "rel": "/software/repository/github/devsim/devsim", - "avatar": "https://avatars.githubusercontent.com/u/3003034?v=4", - "description": "TCAD Semiconductor Device Simulator", + "uid": "github/jhayer/baargin", + "url": "https://github.com/jhayer/baargin", + "rel": "/software/repository/github/jhayer/baargin", + "avatar": "https://avatars.githubusercontent.com/u/8300623?v=4", + "description": "Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow", "topics": [ - "c-plus-plus", - "python", - "semiconductor-physics", - "devsim", - "tcad", - "tcad-device-simulator", - "semiconductor", - "finite-volume", - "pde" + "antimicrobial-resistance", + "bacteria", + "genomics", + "wgs", + "nextflow-pipeline", + "workflow" ] }, { - "uid": "github/aringlis/afino_release_version", - "url": "https://github.com/aringlis/afino_release_version", - "rel": "/software/repository/github/aringlis/afino_release_version", - "avatar": "https://avatars.githubusercontent.com/u/1757836?v=4", - "description": null, + "uid": "github/simple-crypto/SCALib", + "url": "https://github.com/simple-crypto/SCALib", + "rel": "/software/repository/github/simple-crypto/SCALib", + "avatar": "https://avatars.githubusercontent.com/u/82374905?v=4", + "description": "Side-Channel Analysis Library", "topics": [] }, { - "uid": "github/pymatting/pymatting", - "url": "https://github.com/pymatting/pymatting", - "rel": "/software/repository/github/pymatting/pymatting", - "avatar": "https://avatars0.githubusercontent.com/u/59248113?v=4", - "description": "A Python library for alpha matting", + "uid": "github/dicompyler/dicompyler-core", + "url": "https://github.com/dicompyler/dicompyler-core", + "rel": "/software/repository/github/dicompyler/dicompyler-core", + "avatar": "https://avatars.githubusercontent.com/u/8218748?v=4", + "description": "A library of core radiation therapy modules for DICOM RT used by dicompyler", "topics": [ - "alpha-matting", - "image-processing", - "foreground", - "python3" + "dicom", + "dicom-rt", + "python", + "radiation-oncology", + "radiation-physics", + "dvh", + "hacktoberfest" ] }, { - "uid": "github/AgentM-GEG/residual_feature_extraction", - "url": "https://github.com/AgentM-GEG/residual_feature_extraction", - "rel": "/software/repository/github/AgentM-GEG/residual_feature_extraction", - "avatar": "https://avatars.githubusercontent.com/u/20112557?v=4", - "description": "A pipeline that carries out feature extraction of residual substructure within the residual images produced by popular galaxy structural-fitting routines such as GALFIT, GIM2D, etc. This pipeline works on model-subtracted residual images by popular structural fitting routines (e.g., GALFIT, GIM2D, etc) to extract faint low surface brightness features by isolating flux-wise and area-wise significant contiguous pixels regions by rigourous masking routine. This routine accepts the image cubes (original image, model image, residual image) and generates several data products", + "uid": "github/pierrexyz/pybird", + "url": "https://github.com/pierrexyz/pybird", + "rel": "/software/repository/github/pierrexyz/pybird", + "avatar": "https://avatars.githubusercontent.com/u/27974627?v=4", + "description": "Python code for Biased tracers in redshift space", "topics": [] }, { - "uid": "github/mecobpsu/bacseq", - "url": "https://github.com/tmrcpsu/bacseq", - "rel": "/software/repository/github/mecobpsu/bacseq", - "avatar": "https://avatars.githubusercontent.com/u/85468876?v=4", - "description": null, + "uid": "github/pierrexyz/cbird", + "url": "https://github.com/pierrexyz/cbird", + "rel": "/software/repository/github/pierrexyz/cbird", + "avatar": "https://avatars.githubusercontent.com/u/27974627?v=4", + "description": "Code for Bias tracers In Redshift space", "topics": [] }, { - "uid": "github/astrocaroline/opacity-wizard", - "url": "https://github.com/astrocaroline/opacity-wizard", - "rel": "/software/repository/github/astrocaroline/opacity-wizard", - "avatar": "https://avatars.githubusercontent.com/u/10456842?v=4", - "description": null, + "uid": "github/SciML/DataInterpolations.jl", + "url": "https://github.com/SciML/DataInterpolations.jl", + "rel": "/software/repository/github/SciML/DataInterpolations.jl", + "avatar": "https://avatars.githubusercontent.com/u/21238080?v=4", + "description": "A library of data interpolation and smoothing functions", "topics": [] }, { - "uid": "github/wadpac/GGIR", - "url": "https://github.com/wadpac/GGIR", - "rel": "/software/repository/github/wadpac/GGIR", - "avatar": "https://avatars0.githubusercontent.com/u/27425925?v=4", - "description": "Code corresponding to R package GGIR", + "uid": "github/SciML/GlobalSensitivity.jl", + "url": "https://github.com/SciML/GlobalSensitivity.jl", + "rel": "/software/repository/github/SciML/GlobalSensitivity.jl", + "avatar": "https://avatars.githubusercontent.com/u/21238080?v=4", + "description": null, "topics": [] }, { - "uid": "github/Kingsford-Group/scallop", - "url": "https://github.com/Kingsford-Group/scallop", - "rel": "/software/repository/github/Kingsford-Group/scallop", - "avatar": "https://avatars.githubusercontent.com/u/7586159?v=4", - "description": "Scallop is a reference-based transcriptome assembler for RNA-seq", + "uid": "github/compomics/COSS", + "url": "https://github.com/compomics/COSS", + "rel": "/software/repository/github/compomics/COSS", + "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", + "description": "COSS: CompOmics Spectral Searching", "topics": [] }, { - "uid": "github/ethz-randomwalk/polytopewalk", - "url": "https://github.com/ethz-randomwalk/polytopewalk", - "rel": "/software/repository/github/ethz-randomwalk/polytopewalk", - "avatar": "https://avatars.githubusercontent.com/u/169664313?v=4", - "description": "PolytopeWalk: fast sparse and dense random walks on polytope, with C++ backend and Python interface", + "uid": "github/compomics/xilmass", + "url": "https://github.com/compomics/xilmass", + "rel": "/software/repository/github/compomics/xilmass", + "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", + "description": "An algorithm to identify cross-linked peptides", "topics": [] }, { - "uid": "github/souzamonteiro/cnatool", - "url": "https://github.com/souzamonteiro/cnatool", - "rel": "/software/repository/github/souzamonteiro/cnatool", - "avatar": "https://avatars.githubusercontent.com/u/723670?v=4", - "description": "Complex Network Analysis Tool", + "uid": "github/compomics/DeepLC", + "url": "https://github.com/compomics/DeepLC", + "rel": "/software/repository/github/compomics/DeepLC", + "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", + "description": "DeepLC: Retention time prediction for (modified) peptides using Deep Learning.", "topics": [] }, { - "uid": "github/UU-ER/AdOpT-NET0", - "url": "https://github.com/UU-ER/AdOpT-NET0", - "rel": "/software/repository/github/UU-ER/AdOpT-NET0", - "avatar": "https://avatars.githubusercontent.com/u/40859062?v=4", - "description": "AdOpT-NET0 - Advanced Optimization Tool for Networks and Energy Technologies", + "uid": "github/samtools/bcftools", + "url": "https://github.com/samtools/bcftools", + "rel": "/software/repository/github/samtools/bcftools", + "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", + "description": "This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html", "topics": [] }, { - "uid": "github/stillwater-sc/universal", - "url": "https://github.com/stillwater-sc/universal", - "rel": "/software/repository/github/stillwater-sc/universal", - "avatar": "https://avatars.githubusercontent.com/u/18295447?v=4", - "description": "Large collection of number systems providing custom arithmetic and mixed-precision algorithms for AI, Machine Learning, Computer Vision, Signal Processing, CAE, EDA, control, optimization, estimation, and approximation.", - "topics": [ - "arithmetic", - "integer-arithmetic", - "fixed-point-arithmetic", - "rational-arithmetic", - "floating-point-arithmetic", - "posit-arithmetic", - "interval-arithmetic", - "quarter-precision", - "half-precision", - "quad-precision", - "octa-precision", - "arbitrary-precision", - "arbitrary-precision-integers", - "arbitrary-precision-arithmetic", - "arbitrary-precision-floats", - "c-plus-plus", - "embedded-systems", - "artificial-intelligence", - "digital-signal-processing" - ] - }, - { - "uid": "github/aranyics/ReDCM", - "url": "https://github.com/aranyics/ReDCM", - "rel": "/software/repository/github/aranyics/ReDCM", - "avatar": "https://avatars.githubusercontent.com/u/9675098?v=4", - "description": "Reimplementation of DCM12 algorithm in R language", + "uid": "github/samtools/samtools", + "url": "https://github.com/samtools/samtools", + "rel": "/software/repository/github/samtools/samtools", + "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", + "description": "Tools (written in C using htslib) for manipulating next-generation sequencing data", "topics": [] }, { - "uid": "github/spjuhel/BoARIO", - "url": "https://github.com/spjuhel/BoARIO", - "rel": "/software/repository/github/spjuhel/BoARIO", - "avatar": "https://avatars.githubusercontent.com/u/10011382?v=4", - "description": "Python implementation of ARIO model", - "topics": [] + "uid": "github/samtools/htsjdk", + "url": "https://github.com/samtools/htsjdk", + "rel": "/software/repository/github/samtools/htsjdk", + "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", + "description": "A Java API for high-throughput sequencing data (HTS) formats.", + "topics": [ + "genomics", + "sequencing", + "dna", + "ngs", + "bam", + "cram", + "sam", + "fasta", + "vcf", + "java-api", + "java" + ] }, { - "uid": "github/PanKonstantinos/MEvA-X", - "url": "https://github.com/PanKonstantinos/MEvA-X", - "rel": "/software/repository/github/PanKonstantinos/MEvA-X", - "avatar": "https://avatars.githubusercontent.com/u/26748316?v=4", - "description": "Open source Biomarker discovery tool based on multi-objective Evolutionary algorithm and the XGBoost Classifier", - "topics": [] + "uid": "github/samtools/htslib", + "url": "https://github.com/samtools/htslib", + "rel": "/software/repository/github/samtools/htslib", + "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", + "description": "C library for high-throughput sequencing data formats", + "topics": [ + "htslib", + "bioinformatics", + "sam", + "bam", + "cram", + "vcf", + "bcf", + "ngs" + ] }, { - "uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", - "url": "https://github.com/bengeof/QPoweredCompound2DeNovoDrugPropMax", - "rel": "/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", - "avatar": "https://avatars.githubusercontent.com/u/65452898?v=4", - "description": null, + "uid": "github/cdw9bf/CompactGroup", + "url": "https://github.com/cdw9bf/CompactGroup", + "rel": "/software/repository/github/cdw9bf/CompactGroup", + "avatar": "https://avatars.githubusercontent.com/u/10886716?v=4", + "description": "Code to recreate the results of Wiens et al 2019 (https://authors.library.caltech.edu/93762/)", "topics": [] }, { - "uid": "github/nextstrain/auspice", - "url": "https://github.com/nextstrain/auspice", - "rel": "/software/repository/github/nextstrain/auspice", - "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", - "description": "Web app for visualizing pathogen evolution", + "uid": "github/intelligent-soft-robots/o80", + "url": "https://github.com/intelligent-soft-robots/o80", + "rel": "/software/repository/github/intelligent-soft-robots/o80", + "avatar": "https://avatars.githubusercontent.com/u/62772003?v=4", + "description": "synchronization of c++ processes via a custom python API", "topics": [] }, { - "uid": "github/nextstrain/augur", - "url": "https://github.com/nextstrain/augur", - "rel": "/software/repository/github/nextstrain/augur", - "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", - "description": "Pipeline components for real-time phylodynamic analysis", + "uid": "github/thelfer/mfem-mgis", + "url": "https://github.com/thelfer/mfem-mgis", + "rel": "/software/repository/github/thelfer/mfem-mgis", + "avatar": "https://avatars.githubusercontent.com/u/13975528?v=4", + "description": "Couple MFEM and MGIS", "topics": [] }, { - "uid": "github/nextstrain/nextclade", - "url": "https://github.com/nextstrain/nextclade", - "rel": "/software/repository/github/nextstrain/nextclade", - "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", - "description": "Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement", + "uid": "github/thelfer/MFrontGallery", + "url": "https://github.com/thelfer/MFrontGallery", + "rel": "/software/repository/github/thelfer/MFrontGallery", + "avatar": "https://avatars.githubusercontent.com/u/13975528?v=4", + "description": "This project shows how to create a compilation project for MFront properties, behaviours and models", "topics": [ - "clade", - "clades", - "coronavirus", - "covid", - "covid-19", - "dna", - "ncov", - "neherlab", - "nextstrain", - "research", - "rna", - "sars-cov-2", - "science", - "sequences", - "sequencing", - "strain", - "virus", - "covid19", - "next-generation-sequencing", - "influenza" + "heat-transfer", + "material-properties", + "solid-mechanics", + "material-knowledge-management", + "mfront" ] }, { - "uid": "github/JamesPaynter/PyGRB", - "url": "https://github.com/JamesPaynter/PyGRB", - "rel": "/software/repository/github/JamesPaynter/PyGRB", - "avatar": "https://avatars2.githubusercontent.com/u/45152710?v=4", - "description": "Gamma-ray burst analysis library", + "uid": "github/annacrnn/rebound_fragmentation", + "url": "https://github.com/ANNACRNN/REBOUND_fragmentation", + "rel": "/software/repository/github/annacrnn/rebound_fragmentation", + "avatar": "https://avatars.githubusercontent.com/u/40207212?v=4", + "description": "Fragmentation and bulk composition tracking code for the C version of REBOUND. Based on Childs & Steffen 2021.", "topics": [ - "gamma-ray-burst", - "gamma-ray-astronomy", - "astrophysics" + "n-body", + "module", + "fragmentation", + "composition", + "tracking-algorithm" ] }, { - "uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", - "url": "https://github.com/NCAR/NCAR-Classic-Libraries-for-Geophysics", - "rel": "/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", - "avatar": "https://avatars.githubusercontent.com/u/2007542?v=4", - "description": null, + "uid": "github/kemasuda/jnkepler", + "url": "https://github.com/kemasuda/jnkepler", + "rel": "/software/repository/github/kemasuda/jnkepler", + "avatar": "https://avatars.githubusercontent.com/u/30572649?v=4", + "description": "JAX code for modeling nearly-Keplerian orbits", "topics": [] }, { - "uid": "github/ZhaiLab-SUSTech/FLEPSeq", - "url": "https://github.com/ZhaiLab-SUSTech/FLEPSeq", - "rel": "/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", - "avatar": "https://avatars.githubusercontent.com/u/70678303?v=4", - "description": "The analysis pipeline for FLEP-seq", + "uid": "github/szpiech/selscan", + "url": "https://github.com/szpiech/selscan", + "rel": "/software/repository/github/szpiech/selscan", + "avatar": "https://avatars.githubusercontent.com/u/4237506?v=4", + "description": "Haplotype based scans for selection", "topics": [] }, { - "uid": "github/m-dadej/MarSwitching.jl", - "url": "https://github.com/m-dadej/MarSwitching.jl", - "rel": "/software/repository/github/m-dadej/MarSwitching.jl", - "avatar": "https://avatars.githubusercontent.com/u/48299815?v=4", - "description": "MarSwitching.jl: Julia package for Markov switching dynamic models", + "uid": "github/jwohlwend/boltz", + "url": "https://github.com/jwohlwend/boltz", + "rel": "/software/repository/github/jwohlwend/boltz", + "avatar": "https://avatars.githubusercontent.com/u/7190650?v=4", + "description": "Official repository for the Boltz biomolecular interaction models", + "topics": [] + }, + { + "uid": "github/mpievolbio-scicomp/cancer_sim", + "url": "https://github.com/mpievolbio-scicomp/cancer_sim", + "rel": "/software/repository/github/mpievolbio-scicomp/cancer_sim", + "avatar": "https://avatars1.githubusercontent.com/u/48993535?v=4", + "description": "CancerSim: A python3 package for stochastic cancer simulation in 2D.", "topics": [ - "econometrics", - "julia", - "machine-learning", - "markov-chain", - "statistics", - "time-series", - "data-science" + "cancer", + "stochastic", + "tumours", + "mutation-profiles", + "division", + "simulation", + "sampling" ] }, { - "uid": "github/David-McKenna/udpPacketManager", - "url": "https://github.com/David-McKenna/udpPacketManager", - "rel": "/software/repository/github/David-McKenna/udpPacketManager", - "avatar": "https://avatars.githubusercontent.com/u/43447097?v=4", - "description": "C Library for handling CEP packet data from an international LOFAR station", + "uid": "github/MariaTsantaki/FASMA-synthesis", + "url": "https://github.com/MariaTsantaki/FASMA-synthesis", + "rel": "/software/repository/github/MariaTsantaki/FASMA-synthesis", + "avatar": "https://avatars.githubusercontent.com/u/9470245?v=4", + "description": "Python code for stellar spectral analysis", "topics": [] }, { - "uid": "github/NERDSITU/superblockify", - "url": "https://github.com/NERDSITU/superblockify", - "rel": "/software/repository/github/NERDSITU/superblockify", - "avatar": "https://avatars.githubusercontent.com/u/95076718?v=4", - "description": "Source code for superblockify", + "uid": "github/dtanoglidis/DeepShadows", + "url": "https://github.com/dtanoglidis/DeepShadows", + "rel": "/software/repository/github/dtanoglidis/DeepShadows", + "avatar": "https://avatars.githubusercontent.com/u/26015096?v=4", + "description": "Repository for the project \"DeepShadows: Separating LSBGs from artifacts using Deep Learning\"", "topics": [ - "superblocks", - "urban-data-science", - "geospatial", - "network-analysis", - "urban-mobility", - "urban-planning", - "gis", - "osmnx", - "transportation-network" + "deep-learning", + "galaxies" ] }, { - "uid": "github/VincentAlcazer/StatAid", - "url": "https://github.com/VincentAlcazer/StatAid", - "rel": "/software/repository/github/VincentAlcazer/StatAid", - "avatar": "https://avatars0.githubusercontent.com/u/63184395?v=4", - "description": "StatAid is a Shiny app built in an R package to guide researchers and clinicians through data analysis", + "uid": "github/NicOudart/PyBWE", + "url": "https://github.com/NicOudart/PyBWE", + "rel": "/software/repository/github/NicOudart/PyBWE", + "avatar": "https://avatars.githubusercontent.com/u/152175898?v=4", + "description": "Python library for radar Bandwidth Extrapolation (BWE)", "topics": [ - "data-analysis", - "r", - "statistics", - "life-sciences" + "astronomy", + "astrophysics", + "bandwidth", + "bwe", + "extrapolation", + "planetary-science", + "radar", + "resolution", + "sounder", + "pybwe" ] }, { - "uid": "github/BackmanLab/PWSpy", - "url": "https://github.com/BackmanLab/PWSpy", - "rel": "/software/repository/github/BackmanLab/PWSpy", - "avatar": "https://avatars.githubusercontent.com/u/68033654?v=4", - "description": "A Python library dedicated to the analysis of Partial Wave Microscopy (PWS) data.", + "uid": "github/telegraphic/fits2hdf", + "url": "https://github.com/telegraphic/fits2hdf", + "rel": "/software/repository/github/telegraphic/fits2hdf", + "avatar": "https://avatars.githubusercontent.com/u/713251?v=4", + "description": "FITS to HDFITS conversion utility", "topics": [] }, { - "uid": "github/onsala-space-observatory/astromorph", - "url": "https://github.com/onsala-space-observatory/astromorph", - "rel": "/software/repository/github/onsala-space-observatory/astromorph", - "avatar": "https://avatars.githubusercontent.com/u/48208845?v=4", - "description": null, + "uid": "github/telegraphic/pygsm", + "url": "https://github.com/telegraphic/PyGSM", + "rel": "/software/repository/github/telegraphic/pygsm", + "avatar": "https://avatars.githubusercontent.com/u/713251?v=4", + "description": "Python implementation of the Global Sky Model (GSM) for the radio sky between 10 MHz - 5 THz", "topics": [] }, { - "uid": "github/csj607/STaRS", - "url": "https://github.com/csj607/STaRS", - "rel": "/software/repository/github/csj607/STaRS", - "avatar": "https://avatars.githubusercontent.com/u/52664937?v=4", - "description": "Sejong Radiative Transfer through Raman and Rayleigh Scattering with atomic hydrogen", + "uid": "github/RasmussenLab/vamb", + "url": "https://github.com/RasmussenLab/vamb", + "rel": "/software/repository/github/RasmussenLab/vamb", + "avatar": "https://avatars.githubusercontent.com/u/50487949?v=4", + "description": "Variational autoencoder for metagenomic binning", "topics": [] }, { - "uid": "github/bcbio/bcbio.variation.recall", - "url": "https://github.com/bcbio/bcbio.variation.recall", - "rel": "/software/repository/github/bcbio/bcbio.variation.recall", - "avatar": "https://avatars.githubusercontent.com/u/14271794?v=4", - "description": "Parallel merging, squaring off and ensemble calling for genomic variants", + "uid": "github/ggobi/ggobi", + "url": "https://github.com/ggobi/ggobi", + "rel": "/software/repository/github/ggobi/ggobi", + "avatar": "https://avatars.githubusercontent.com/u/423638?v=4", + "description": "High dimensional data vis", "topics": [] }, { - "uid": "github/bcbio/bcbio-nextgen", - "url": "https://github.com/bcbio/bcbio-nextgen", - "rel": "/software/repository/github/bcbio/bcbio-nextgen", - "avatar": "https://avatars.githubusercontent.com/u/14271794?v=4", - "description": "Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis", + "uid": "github/sundarjhu/2-DUST", + "url": "https://github.com/sundarjhu/2-DUST", + "rel": "/software/repository/github/sundarjhu/2-DUST", + "avatar": "https://avatars.githubusercontent.com/u/15619959?v=4", + "description": "2-DUST is a general-purpose dust radiative transfer code for an axisymmetric system that reveals the global energetics of dust grains in the shell and the 2-D projected morphologies of the shell that are strongly dependent on the mixed effects of the axisymmetric dust distribution and inclination angle. It can be used to model a variety of axisymmetric astronomical dust systems.", "topics": [] }, { - "uid": "github/abinit/abinit", - "url": "https://github.com/abinit/abinit", - "rel": "/software/repository/github/abinit/abinit", - "avatar": "https://avatars.githubusercontent.com/u/15837788?v=4", - "description": "The official github mirror of the Abinit repository. We welcome bug fixes and improvements. Note that most of the active developments are hosted on our https://gitlab.abinit.org/ server. Before embarking on making significant changes, please contact the Abinit group.", + "uid": "github/pierrepo/autoclassweb", + "url": "https://github.com/pierrepo/autoclassweb", + "rel": "/software/repository/github/pierrepo/autoclassweb", + "avatar": "https://avatars2.githubusercontent.com/u/733861?v=4", + "description": "AutoClassWeb: a web app to run AutoClass C Bayesian clustering :package: :rocket:", + "topics": [] + }, + { + "uid": "github/glenco/lensed", + "url": "https://github.com/glenco/lensed", + "rel": "/software/repository/github/glenco/lensed", + "avatar": "https://avatars.githubusercontent.com/u/10499259?v=4", + "description": "forward reconstruction of lenses and sources from strong lensing observations", "topics": [ - "ab-initio", - "dfpt", - "kohn-sham", - "mbpt", - "density-functional-theory", - "abinit", - "fortran" + "astronomy", + "gravitational-lensing", + "astrophysics", + "opencl", + "gpgpu" ] }, { - "uid": "github/JensUweUlrich/ReadBouncer", - "url": "https://github.com/JensUweUlrich/ReadBouncer", - "rel": "/software/repository/github/JensUweUlrich/ReadBouncer", - "avatar": "https://avatars.githubusercontent.com/u/46562264?v=4", - "description": "Fast and scalable nanopore adaptive sampling", + "uid": "github/SESMG/SESMG", + "url": "https://github.com/SESMG/SESMG", + "rel": "/software/repository/github/SESMG/SESMG", + "avatar": "https://avatars.githubusercontent.com/u/122264954?v=4", + "description": "Model generator for the optimization of energy systems, based on the modeling framework oemof. No programming skills are required to use it, as the parameters are entered using spreadsheets (e.g. Excel, LibreOffice).", "topics": [] }, { - "uid": "github/aertslab/pySCENIC", - "url": "https://github.com/aertslab/pySCENIC", - "rel": "/software/repository/github/aertslab/pySCENIC", - "avatar": "https://avatars.githubusercontent.com/u/3940817?v=4", - "description": "pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.", + "uid": "github/ajohnson-uoregon/llvm-project", + "url": "https://github.com/ajohnson-uoregon/llvm-project", + "rel": "/software/repository/github/ajohnson-uoregon/llvm-project", + "avatar": "https://avatars.githubusercontent.com/u/37465135?v=4", + "description": "The LLVM Project is a collection of modular and reusable compiler and toolchain technologies. Note: the repository does not accept github pull requests at this moment. Please submit your patches at http://reviews.llvm.org.", + "topics": [] + }, + { + "uid": "github/JuliaPlots/Makie.jl", + "url": "https://github.com/JuliaPlots/Makie.jl", + "rel": "/software/repository/github/JuliaPlots/Makie.jl", + "avatar": "https://avatars.githubusercontent.com/u/19197049?v=4", + "description": "High level plotting on the GPU.", "topics": [ - "single-cell", - "transcriptomics", - "gene-regulatory-network", - "transcription-factors" + "julia", + "plotting", + "visualization", + "julia-language", + "gpu", + "graphics" ] }, { - "uid": "github/BleekerLab/PhenoFeatureFinder", - "url": "https://github.com/BleekerLab/PhenoFeatureFinder", - "rel": "/software/repository/github/BleekerLab/PhenoFeatureFinder", - "avatar": "https://avatars.githubusercontent.com/u/24551794?v=4", - "description": "A Python package dedicated to identifying plant metabolite features related to insect resistance", + "uid": "github/RETURN-project/BenchmarkRecovery", + "url": "https://github.com/RETURN-project/BenchmarkRecovery", + "rel": "/software/repository/github/RETURN-project/BenchmarkRecovery", + "avatar": "https://avatars.githubusercontent.com/u/54841522?v=4", + "description": "Benchmarking recovery indicators from remote sensing time series", "topics": [] }, { - "uid": "github/mbhall88/rasusa", - "url": "https://github.com/mbhall88/rasusa", - "rel": "/software/repository/github/mbhall88/rasusa", - "avatar": "https://avatars.githubusercontent.com/u/20403931?v=4", - "description": "Randomly subsample sequencing reads to a specified coverage", - "topics": [ - "bioinformatics", - "fastq", - "subsampling", - "coverage", - "fasta", - "genome-analysis", - "random" - ] + "uid": "github/RemieJanssen/phylox", + "url": "https://github.com/RemieJanssen/PhyloX", + "rel": "/software/repository/github/RemieJanssen/phylox", + "avatar": "https://avatars.githubusercontent.com/u/27146369?v=4", + "description": "A python package with tools for constructing, manipulating, and analyzing phylogenetic networks.", + "topics": [] }, { - "uid": "github/AstroChem/VISIBLE", - "url": "https://github.com/AstroChem/VISIBLE", - "rel": "/software/repository/github/AstroChem/VISIBLE", - "avatar": "https://avatars.githubusercontent.com/u/11094466?v=4", - "description": "VISIbility Based Line Extraction", + "uid": "github/samconnolly/DELightcurveSimulation", + "url": "https://github.com/samconnolly/DELightcurveSimulation", + "rel": "/software/repository/github/samconnolly/DELightcurveSimulation", + "avatar": "https://avatars.githubusercontent.com/u/5765263?v=4", + "description": "Emmanoulopoulos style lightcurve simulation", "topics": [] }, { - "uid": "github/latrop/DECA", - "url": "https://github.com/latrop/DECA", - "rel": "/software/repository/github/latrop/DECA", - "avatar": "https://avatars.githubusercontent.com/u/382630?v=4", - "description": "A tool for decomposition of images of galaxies", + "uid": "github/erling6232/imagedata", + "url": "https://github.com/erling6232/imagedata", + "rel": "/software/repository/github/erling6232/imagedata", + "avatar": "https://avatars.githubusercontent.com/u/26794739?v=4", + "description": "Read/write medical image data", "topics": [] }, { - "uid": "github/inab/trimal", - "url": "https://github.com/inab/trimal", - "rel": "/software/repository/github/inab/trimal", - "avatar": "https://avatars.githubusercontent.com/u/3019853?v=4", - "description": "A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0", + "uid": "github/twopin/CAMP", + "url": "https://github.com/twopin/CAMP", + "rel": "/software/repository/github/twopin/CAMP", + "avatar": "https://avatars.githubusercontent.com/u/22184602?v=4", + "description": "predicting peptide-protein interactions", + "topics": [] + }, + { + "uid": "github/PennyLaneAI/catalyst", + "url": "https://github.com/PennyLaneAI/catalyst", + "rel": "/software/repository/github/PennyLaneAI/catalyst", + "avatar": "https://avatars.githubusercontent.com/u/64286425?v=4", + "description": "A JIT compiler for hybrid quantum programs in PennyLane", "topics": [ - "multiple-sequence-alignment", - "trimming", - "bioinformatics-tool" + "jit", + "mlir", + "qir", + "quantum-compiler", + "autodiff", + "automatic-differentiation", + "jax", + "llvm", + "python", + "quantum", + "quantum-computing", + "pennylane" ] }, { - "uid": "github/Varnani/pywd2015-qt5", - "url": "https://github.com/Varnani/pywd2015-qt5", - "rel": "/software/repository/github/Varnani/pywd2015-qt5", - "avatar": "https://avatars.githubusercontent.com/u/32557144?v=4", - "description": "A Qt5 GUI written in Python for Wilson - Devinney eclipsing binary modeling software.", + "uid": "github/slimgroup/InvertibleNetworks.jl", + "url": "https://github.com/slimgroup/InvertibleNetworks.jl", + "rel": "/software/repository/github/slimgroup/InvertibleNetworks.jl", + "avatar": "https://avatars.githubusercontent.com/u/352217?v=4", + "description": "A Julia framework for invertible neural networks", "topics": [ - "pyqt5", - "astronomy", - "astrophysics", - "python3", - "python27", - "binary-stars" + "machine-learning", + "invertible-neural-networks", + "deep-invertible-networks", + "invertible-1x1-convolutions", + "normalizing-flows", + "julia", + "deep-learning", + "bayesian-inference", + "julia-language", + "normalizing-flow" ] }, { - "uid": "github/birnstiel/two-pop-py", - "url": "https://github.com/birnstiel/two-pop-py", - "rel": "/software/repository/github/birnstiel/two-pop-py", - "avatar": "https://avatars.githubusercontent.com/u/3997171?v=4", - "description": "Implementation of the 2-population model for dust evolution in protoplanetary disks after Birnstiel, Klahr, & Ercolano, A&A 2012", + "uid": "github/kernsuite-debian/parseltongue", + "url": "https://github.com/kernsuite-debian/parseltongue", + "rel": "/software/repository/github/kernsuite-debian/parseltongue", + "avatar": "https://avatars.githubusercontent.com/u/20183892?v=4", + "description": null, "topics": [] }, { - "uid": "github/polca/pathways", - "url": "https://github.com/polca/pathways", - "rel": "/software/repository/github/polca/pathways", - "avatar": "https://avatars.githubusercontent.com/u/58623740?v=4", - "description": "Scenario-wide Life Cycle Assessment", - "topics": [ - "energy", - "lca", - "prospective", - "scenario" - ] + "uid": "github/akleroy/phangs_imaging_scripts", + "url": "https://github.com/akleroy/phangs_imaging_scripts", + "rel": "/software/repository/github/akleroy/phangs_imaging_scripts", + "avatar": "https://avatars.githubusercontent.com/u/774248?v=4", + "description": "CASA+python imaging and product creation scripts for PHANGS-ALMA", + "topics": [] }, { - "uid": "github/polca/unfold", - "url": "https://github.com/polca/unfold", - "rel": "/software/repository/github/polca/unfold", - "avatar": "https://avatars.githubusercontent.com/u/58623740?v=4", - "description": "UNpacking For scenariO-based Lca Databases", + "uid": "github/trivnguyen/florah", + "url": "https://github.com/trivnguyen/florah", + "rel": "/software/repository/github/trivnguyen/florah", + "avatar": "https://avatars.githubusercontent.com/u/27309647?v=4", + "description": "Generate galaxy merger tree with machine learning", + "topics": [] + }, + { + "uid": "github/exafmm/exafmm-t", + "url": "https://github.com/exafmm/exafmm-t", + "rel": "/software/repository/github/exafmm/exafmm-t", + "avatar": "https://avatars.githubusercontent.com/u/12694304?v=4", + "description": "A kernel-independent fast multipole method library with Python interface.", + "topics": [] + }, + { + "uid": "github/murphycj/AGFusion", + "url": "https://github.com/murphycj/AGFusion", + "rel": "/software/repository/github/murphycj/AGFusion", + "avatar": "https://avatars.githubusercontent.com/u/3837196?v=4", + "description": "Python package to annotate and visualize gene fusions.", "topics": [ - "ecoinvent", - "premise", - "prospective", - "scenario" + "gene-fusion", + "protein", + "fusion", + "rna-seq", + "python", + "cancer", + "cancer-genomics", + "chimera", + "bioinformatics", + "structural-variation" ] }, { - "uid": "github/jstuecker/adiabatic-tides", - "url": "https://github.com/jstuecker/adiabatic-tides", - "rel": "/software/repository/github/jstuecker/adiabatic-tides", - "avatar": "https://avatars.githubusercontent.com/u/17026809?v=4", - "description": "Code for evaluating the tidal stripping of dark matter (sub)haloes in the adiabatic limit", + "uid": "github/rramadeu/AGHmatrix", + "url": "https://github.com/rramadeu/AGHmatrix", + "rel": "/software/repository/github/rramadeu/AGHmatrix", + "avatar": "https://avatars.githubusercontent.com/u/10066681?v=4", + "description": "An R package to compute relationship matrices for diploid and autopolyploid species", "topics": [] }, { - "uid": "github/veg/hivtrace", - "url": "https://github.com/veg/hivtrace", - "rel": "/software/repository/github/veg/hivtrace", - "avatar": "https://avatars.githubusercontent.com/u/1051502?v=4", - "description": null, + "uid": "github/tsfloss/DensityFieldTools", + "url": "https://github.com/tsfloss/DensityFieldTools", + "rel": "/software/repository/github/tsfloss/DensityFieldTools", + "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", + "description": "Tools for manipulating density fields and measuring power spectra and bispectra", "topics": [] }, { - "uid": "github/veg/tn93", - "url": "https://github.com/veg/tn93", - "rel": "/software/repository/github/veg/tn93", - "avatar": "https://avatars.githubusercontent.com/u/1051502?v=4", - "description": "TN93 fast distance calculator", + "uid": "github/tsfloss/URecon", + "url": "https://github.com/tsfloss/URecon", + "rel": "/software/repository/github/tsfloss/URecon", + "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", + "description": "U-Net Architecture to reconstruct the initial conditions of N-Body simulations", "topics": [] }, { - "uid": "github/Weeks-UNC/RingMapper", - "url": "https://github.com/Weeks-UNC/RingMapper", - "rel": "/software/repository/github/Weeks-UNC/RingMapper", - "avatar": "https://avatars.githubusercontent.com/u/20342652?v=4", - "description": "Code for performing RING-MaP and PAIR-MaP analysis", + "uid": "github/tsfloss/BFast", + "url": "https://github.com/tsfloss/BFast", + "rel": "/software/repository/github/tsfloss/BFast", + "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", + "description": "A fast GPU based bispectrum estimator implemented using JAX", "topics": [] }, { - "uid": "github/VChristiaens/special", - "url": "https://github.com/VChristiaens/special", - "rel": "/software/repository/github/VChristiaens/special", - "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", - "description": "Package for spectral characterization of (sub-)stellar objects", + "uid": "github/radis/radis", + "url": "https://github.com/radis/radis", + "rel": "/software/repository/github/radis/radis", + "avatar": "https://avatars.githubusercontent.com/u/35809936?v=4", + "description": "\ud83c\udf31 A fast line-by-line code for high-resolution infrared molecular spectra", + "topics": [ + "spectroscopy", + "spectra", + "infrared", + "hitran", + "hitemp", + "plasma", + "plasma-physics", + "combustion", + "radiation", + "astrophysics", + "exoplanets", + "closember" + ] + }, + { + "uid": "github/ncas-cms/pyfive", + "url": "https://github.com/NCAS-CMS/pyfive", + "rel": "/software/repository/github/ncas-cms/pyfive", + "avatar": "https://avatars.githubusercontent.com/u/31280705?v=4", + "description": "A pure Python HDF5 file reader", "topics": [] }, { - "uid": "github/VChristiaens/MINDS", - "url": "https://github.com/VChristiaens/MINDS", - "rel": "/software/repository/github/VChristiaens/MINDS", - "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", - "description": "MINDS pipeline for the reduction of MIRI-MRS data", + "uid": "github/ChristopherWilks/megadepth", + "url": "https://github.com/ChristopherWilks/megadepth", + "rel": "/software/repository/github/ChristopherWilks/megadepth", + "avatar": "https://avatars.githubusercontent.com/u/6289012?v=4", + "description": "BigWig and BAM utilities", "topics": [] }, { - "uid": "github/VChristiaens/vcal_sphere", - "url": "https://github.com/VChristiaens/vcal_sphere", - "rel": "/software/repository/github/VChristiaens/vcal_sphere", - "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", - "description": "Pipeline for calibration, pre-processing and post-processing of SPHERE IRDIS and IFS data, based on VIP routines..", + "uid": "github/anwarbio/bioassays", + "url": "https://github.com/anwarbio/bioassays", + "rel": "/software/repository/github/anwarbio/bioassays", + "avatar": "https://avatars3.githubusercontent.com/u/7861503?v=4", + "description": null, "topics": [] }, { - "uid": "github/medvedevgroup/varmatch", - "url": "https://github.com/medvedevgroup/varmatch", - "rel": "/software/repository/github/medvedevgroup/varmatch", - "avatar": "https://avatars.githubusercontent.com/u/6886846?v=4", - "description": "robust matching of small variant datasets using flexible scoring schemes", + "uid": "github/heuermh/dishevelled-bio", + "url": "https://github.com/heuermh/dishevelled-bio", + "rel": "/software/repository/github/heuermh/dishevelled-bio", + "avatar": "https://avatars.githubusercontent.com/u/35293?v=4", + "description": "dishevelled.org bio", + "topics": [ + "bioinformatics" + ] + }, + { + "uid": "github/jordanflitter/21cmFirstCLASS", + "url": "https://github.com/jordanflitter/21cmFirstCLASS", + "rel": "/software/repository/github/jordanflitter/21cmFirstCLASS", + "avatar": "https://avatars.githubusercontent.com/u/131596329?v=4", + "description": "This is an extension of the popular 21cmFAST code that interfaces with CLASS to generate initial conditions at recombination that are consistent with the input cosmological model", "topics": [] }, { - "uid": "github/medvedevgroup/TwoPaCo", - "url": "https://github.com/medvedevgroup/TwoPaCo", - "rel": "/software/repository/github/medvedevgroup/TwoPaCo", - "avatar": "https://avatars.githubusercontent.com/u/6886846?v=4", - "description": "A fast constructor of the compressed de Bruijn graph from many genomes", + "uid": "github/JuBiotech/peak-performance", + "url": "https://github.com/JuBiotech/peak-performance", + "rel": "/software/repository/github/JuBiotech/peak-performance", + "avatar": "https://avatars.githubusercontent.com/u/81701481?v=4", + "description": "A Python toolbox for Bayesian inference of peak areas.", "topics": [ - "bioinformatics", - "graph-algorithms", - "comparative-genomics", - "de-bruijn-graphs", - "genomics" + "bayesian-inference", + "hplc", + "liquid-chromatography", + "mass-spectrometry", + "metabolomics" ] }, { - "uid": "github/konkolyseismolab/seismolab", - "url": "https://github.com/konkolyseismolab/seismolab", - "rel": "/software/repository/github/konkolyseismolab/seismolab", - "avatar": "https://avatars.githubusercontent.com/u/92322252?v=4", - "description": "Open-source python framework for downloading, analyzing, and visualizing data of variable stars from space-based surveys.", + "uid": "github/hyattpd/Prodigal", + "url": "https://github.com/hyattpd/Prodigal", + "rel": "/software/repository/github/hyattpd/Prodigal", + "avatar": "https://avatars.githubusercontent.com/u/4992459?v=4", + "description": "Prodigal Gene Prediction Software", "topics": [] }, { - "uid": "github/nach00gar/16SMicrobiomeMLFS", - "url": "https://github.com/nach00gar/16SMicrobiomeMLFS", - "rel": "/software/repository/github/nach00gar/16SMicrobiomeMLFS", - "avatar": "https://avatars.githubusercontent.com/u/44344214?v=4", - "description": "Data & Code for the 16S Microbiome Disease Classification Article", + "uid": "github/kkrismer/scansite4", + "url": "https://github.com/kkrismer/scansite-tools", + "rel": "/software/repository/github/kkrismer/scansite4", + "avatar": "https://avatars.githubusercontent.com/u/9969612?v=4", + "description": "Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.", + "topics": [ + "gwt", + "computational-biology", + "bioinformatics", + "pwm", + "opls", + "yaffe-lab", + "koch-institute", + "mit" + ] + }, + { + "uid": "github/axgoujon/convex_ridge_regularizers", + "url": "https://github.com/axgoujon/convex_ridge_regularizers", + "rel": "/software/repository/github/axgoujon/convex_ridge_regularizers", + "avatar": "https://avatars.githubusercontent.com/u/44649983?v=4", + "description": null, "topics": [] }, { - "uid": "github/jiangyuts/facetclumps", - "url": "https://github.com/JiangYuTS/FacetClumps", - "rel": "/software/repository/github/jiangyuts/facetclumps", - "avatar": "https://avatars.githubusercontent.com/u/123626665?v=4", - "description": "FacetClumps: A molecular clump detection algorithm based on Facet model", + "uid": "github/henrycousins/gspa", + "url": "https://github.com/henrycousins/gspa", + "rel": "/software/repository/github/henrycousins/gspa", + "avatar": "https://avatars.githubusercontent.com/u/55973825?v=4", + "description": "Python implementation of gene set proximity analysis", "topics": [] }, { - "uid": "github/fritzsedlazeck/Sniffles", - "url": "https://github.com/fritzsedlazeck/Sniffles", - "rel": "/software/repository/github/fritzsedlazeck/Sniffles", - "avatar": "https://avatars.githubusercontent.com/u/2081951?v=4", - "description": "Structural variation caller using third generation sequencing", + "uid": "github/adigenova/wengan", + "url": "https://github.com/adigenova/wengan", + "rel": "/software/repository/github/adigenova/wengan", + "avatar": "https://avatars3.githubusercontent.com/u/7844296?v=4", + "description": "An accurate and ultra-fast hybrid genome assembler", "topics": [ - "bioinformatics", - "structural-variations", - "ngm-lr", - "pacbio", + "illumina", "nanopore", - "structural-variation", - "bioconda" - ] - }, - { - "uid": "github/fritzsedlazeck/SURVIVOR", - "url": "https://github.com/fritzsedlazeck/SURVIVOR", - "rel": "/software/repository/github/fritzsedlazeck/SURVIVOR", - "avatar": "https://avatars.githubusercontent.com/u/2081951?v=4", - "description": "Toolset for SV simulation, comparison and filtering", - "topics": [ - "bioinformatics", - "structural-variations", - "simulator", - "comparison", - "survivor", - "vcf", - "bioconda" + "pacbio", + "hybrid", + "genome-assembler" ] }, { - "uid": "github/maps-as-data/MapReader", - "url": "https://github.com/maps-as-data/MapReader", - "rel": "/software/repository/github/maps-as-data/MapReader", - "avatar": "https://avatars.githubusercontent.com/u/179117192?v=4", - "description": "A computer vision pipeline for exploring and analyzing images at scale", + "uid": "github/pcubillos/repack", + "url": "https://github.com/pcubillos/repack", + "rel": "/software/repository/github/pcubillos/repack", + "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", + "description": "Repack and compress line-transition data", "topics": [ - "hut23", - "hut23-96", - "computer-vision", - "deep-learning", - "machine-learning", - "pytorch", - "article", - "digital-humanities", - "maps", - "spatial-data" + "radiative-transfer", + "exoplanets", + "spectroscopy", + "hitran", + "exomol" ] }, { - "uid": "github/spinicist/riesling", - "url": "https://github.com/spinicist/riesling", - "rel": "/software/repository/github/spinicist/riesling", - "avatar": "https://avatars.githubusercontent.com/u/11050744?v=4", - "description": "Radial Interstices Enable Speedy Low-Volume Imaging", + "uid": "github/pcubillos/rate", + "url": "https://github.com/pcubillos/rate", + "rel": "/software/repository/github/pcubillos/rate", + "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", + "description": "Reliable Analytic Thermochemical Equilibrium", "topics": [] }, { - "uid": "github/AA-ALERT/frbcatdb", - "url": "https://github.com/AA-ALERT/frbcatdb", - "rel": "/software/repository/github/AA-ALERT/frbcatdb", - "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", - "description": "Fast Radio Burst (FRB) Catalogue DB management", + "uid": "github/pcubillos/pyratbay", + "url": "https://github.com/pcubillos/pyratbay", + "rel": "/software/repository/github/pcubillos/pyratbay", + "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", + "description": "Python Radiative Transfer in a Bayesian Framework", "topics": [] }, { - "uid": "github/AA-ALERT/Dedispersion", - "url": "https://github.com/AA-ALERT/Dedispersion", - "rel": "/software/repository/github/AA-ALERT/Dedispersion", - "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", - "description": "Radio astronomy dedispersion algorithm implemented for many-core accelerators.", - "topics": [] + "uid": "github/pcubillos/gen_tso", + "url": "https://github.com/pcubillos/gen_tso", + "rel": "/software/repository/github/pcubillos/gen_tso", + "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", + "description": "A general TSO simulator for exoplanets with JWST", + "topics": [ + "etc", + "exoplanets", + "jwst" + ] }, { - "uid": "github/AA-ALERT/AstroData", - "url": "https://github.com/AA-ALERT/AstroData", - "rel": "/software/repository/github/AA-ALERT/AstroData", - "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", - "description": "Set of C++ classes to operate on radio astronomical data.", - "topics": [] + "uid": "github/pcubillos/mc3", + "url": "https://github.com/pcubillos/mc3", + "rel": "/software/repository/github/pcubillos/mc3", + "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", + "description": "Python MCMC Sampler", + "topics": [ + "mcmc", + "python" + ] }, { - "uid": "github/AA-ALERT/AMBER", - "url": "https://github.com/AA-ALERT/AMBER", - "rel": "/software/repository/github/AA-ALERT/AMBER", - "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", - "description": "A many-core transient searching pipeline, designed mainly to search in real-time for Fast Radio Bursts.", - "topics": [] + "uid": "github/xenon-middleware/xenon", + "url": "https://github.com/xenon-middleware/xenon", + "rel": "/software/repository/github/xenon-middleware/xenon", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "A middleware abstraction library that provides a simple programming interface to various compute and storage resources.", + "topics": [ + "java", + "batch-job", + "middleware", + "library" + ] }, { - "uid": "github/AA-ALERT/frbcat-web", - "url": "https://github.com/AA-ALERT/frbcat-web", - "rel": "/software/repository/github/AA-ALERT/frbcat-web", - "avatar": "https://avatars2.githubusercontent.com/u/20970511?v=4", - "description": "FRBCat web", + "uid": "github/xenon-middleware/pyxenon", + "url": "https://github.com/xenon-middleware/pyxenon", + "rel": "/software/repository/github/xenon-middleware/pyxenon", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "Python bindings for the Xenon API", "topics": [] }, { - "uid": "github/hpc-maths/samurai", - "url": "https://github.com/hpc-maths/samurai", - "rel": "/software/repository/github/hpc-maths/samurai", - "avatar": "https://avatars.githubusercontent.com/u/75079410?v=4", - "description": "Intervals coupled with algebra of set to handle adaptive mesh refinement and operators on it.", + "uid": "github/mlr-org/mcboost", + "url": "https://github.com/mlr-org/mcboost", + "rel": "/software/repository/github/mlr-org/mcboost", + "avatar": "https://avatars.githubusercontent.com/u/12941794?v=4", + "description": "Multi-Calibration & Multi-Accuracy Boosting for R", "topics": [ - "adaptive-mesh-refinement", - "amr", - "cartesian", - "scientific-computing" + "machine-learning", + "classification", + "fairness", + "fairness-ml", + "fairness-ai", + "responsible-ai", + "bias-correction", + "bias-detection", + "post-processing", + "ethics" ] }, { - "uid": "github/ndaniyar/aphot", - "url": "https://github.com/ndaniyar/aphot", - "rel": "/software/repository/github/ndaniyar/aphot", - "avatar": "https://avatars.githubusercontent.com/u/723917?v=4", - "description": "Photon Asymmetry", - "topics": [] + "uid": "github/rudolffu/pyfosc", + "url": "https://github.com/rudolffu/pyfosc", + "rel": "/software/repository/github/rudolffu/pyfosc", + "avatar": "https://avatars.githubusercontent.com/u/23732534?v=4", + "description": "PyFOSC is a pipeline toolbox for spectroscopic data reduction written in Python. It can be used for FOSC data from Xinglong/Lijiang 2-meter telescopes.", + "topics": [ + "iraf", + "pyraf", + "astroconda", + "spectroscopy", + "pipeline-toolbox" + ] }, { - "uid": "github/KostasValeckas/PyLongslit", - "url": "https://github.com/KostasValeckas/PyLongslit", - "rel": "/software/repository/github/KostasValeckas/PyLongslit", - "avatar": "https://avatars.githubusercontent.com/u/117293401?v=4", - "description": null, + "uid": "github/LSSTDESC/Spectractor", + "url": "https://github.com/LSSTDESC/Spectractor", + "rel": "/software/repository/github/LSSTDESC/Spectractor", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Spectractor aims at measuring the atmospheric transmission from slitless spectrophotometry images.", "topics": [] }, { - "uid": "github/tberlok/paicos", - "url": "https://github.com/tberlok/paicos", - "rel": "/software/repository/github/tberlok/paicos", - "avatar": "https://avatars.githubusercontent.com/u/10655136?v=4", - "description": "An object-oriented Python package for analysis of (cosmological) simulations performed with Arepo", + "uid": "github/LSSTDESC/chroma", + "url": "https://github.com/LSSTDESC/chroma", + "rel": "/software/repository/github/LSSTDESC/chroma", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Investigations of chromatic effects for LSST weak lensing, as documented here: https://LSSTDESC.github.io/chroma/ and here:", "topics": [] }, { - "uid": "github/Arpitk1001/RotCurveTool", - "url": "https://github.com/Arpitk1001/RotCurveTool", - "rel": "/software/repository/github/Arpitk1001/RotCurveTool", - "avatar": "https://avatars.githubusercontent.com/u/212198082?v=4", - "description": "A streamlined Python-based tool for simulating and fitting galactic rotation curves using modular mass models and statistical inference.", + "uid": "github/LSSTDESC/snmachine", + "url": "https://github.com/LSSTDESC/snmachine", + "rel": "/software/repository/github/LSSTDESC/snmachine", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Machine learning code for photometric supernova classification", "topics": [] }, { - "uid": "github/zengzhenhuan/GFNet", - "url": "https://github.com/zengzhenhuan/GFNet", - "rel": "/software/repository/github/zengzhenhuan/GFNet", - "avatar": "https://avatars.githubusercontent.com/u/53371536?v=4", - "description": null, - "topics": [] + "uid": "github/LSSTDESC/BlendingToolKit", + "url": "https://github.com/LSSTDESC/BlendingToolKit", + "rel": "/software/repository/github/LSSTDESC/BlendingToolKit", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Tools to create blend catalogs, produce training samples and implement blending metrics", + "topics": [ + "simulation", + "galaxies", + "tutorials", + "cosmology", + "blending", + "crowded-scenes", + "blended-galaxies" + ] }, { - "uid": "github/aalhossary/pyemgpipeline", - "url": "https://github.com/aalhossary/pyemgpipeline", - "rel": "/software/repository/github/aalhossary/pyemgpipeline", - "avatar": "https://avatars.githubusercontent.com/u/3660195?v=4", - "description": null, + "uid": "github/LSSTDESC/sacc", + "url": "https://github.com/LSSTDESC/sacc", + "rel": "/software/repository/github/LSSTDESC/sacc", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Save All Correlations and Covariances", "topics": [] }, { - "uid": "github/reproducible-biomedical-modeling/Biosimulations", - "url": "https://github.com/biosimulations/Biosimulations", - "rel": "/software/repository/github/reproducible-biomedical-modeling/Biosimulations", - "avatar": "https://avatars0.githubusercontent.com/u/53012665?v=4", - "description": "Platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results", + "uid": "github/LSSTDESC/descqa", + "url": "https://github.com/LSSTDESC/descqa", + "rel": "/software/repository/github/LSSTDESC/descqa", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "A validation framework and tests for mock galaxy catalogs and beyond", "topics": [ - "biology", - "modeling", - "simulation", - "standards", - "sbml", - "sed-ml", - "vega", - "reproducibility", - "biochemical-networks", - "biosimulations" + "nersc", + "descqa", + "validation", + "python", + "lsst", + "web-app" ] }, { - "uid": "github/carnotresearch/cr-sparse", - "url": "https://github.com/carnotresearch/cr-sparse", - "rel": "/software/repository/github/carnotresearch/cr-sparse", - "avatar": "https://avatars.githubusercontent.com/u/71070447?v=4", - "description": "Functional models and algorithms for sparse signal processing", - "topics": [ - "sparse-representations", - "jax", - "wavelets", - "convex-optimization", - "linear-operators", - "compressive-sensing", - "functional-programming", - "xla", - "l1-regularization", - "sparse-linear-systems" - ] + "uid": "github/LSSTDESC/CCL", + "url": "https://github.com/LSSTDESC/CCL", + "rel": "/software/repository/github/LSSTDESC/CCL", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "DESC Core Cosmology Library: cosmology routines with validated numerical accuracy", + "topics": [] }, { - "uid": "github/a8864666-rgb/fgoc", - "url": "https://github.com/a8864666-rgb/fgoc", - "rel": "/software/repository/github/a8864666-rgb/fgoc", - "avatar": "https://avatars.githubusercontent.com/u/240145241?v=4", - "description": "FGOC: Focal-Geometry and Curvature classifier for early identification of non-Keplerian and interstellar trajectories in LSST short-arc astrometry.", + "uid": "github/LSSTDESC/NaMaster", + "url": "https://github.com/LSSTDESC/NaMaster", + "rel": "/software/repository/github/LSSTDESC/NaMaster", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "A unified pseudo-Cl framework", "topics": [] }, { - "uid": "github/auctus-team/pycapacity", - "url": "https://github.com/auctus-team/pycapacity", - "rel": "/software/repository/github/auctus-team/pycapacity", - "avatar": "https://avatars.githubusercontent.com/u/125655421?v=4", - "description": "An efficient task-space capacity calculation package for robotics and biomechanics", + "uid": "github/LSSTDESC/WeakLensingDeblending", + "url": "https://github.com/LSSTDESC/WeakLensingDeblending", + "rel": "/software/repository/github/LSSTDESC/WeakLensingDeblending", + "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", + "description": "Weak lensing fast simulations and analysis of blended objects.", "topics": [ - "biomechanics", - "linear-algebra", - "polytope", - "robotics", - "pip-package", - "real-time" + "astronomy", + "python" ] }, { - "uid": "github/AstraZeneca/kallisto", - "url": "https://github.com/AstraZeneca/kallisto", - "rel": "/software/repository/github/AstraZeneca/kallisto", - "avatar": "https://avatars.githubusercontent.com/u/16338928?v=4", - "description": "Efficiently calculate 3D-atomic/molecular features for quantitative structure-activity relationship approaches.", - "topics": [ - "chemistry", - "computational-chemistry", - "machinelearning", - "quantum-chemistry" - ] + "uid": "github/gdefazio/kMetaShot", + "url": "https://github.com/gdefazio/kMetaShot", + "rel": "/software/repository/github/gdefazio/kMetaShot", + "avatar": "https://avatars.githubusercontent.com/u/48283042?v=4", + "description": null, + "topics": [] }, { - "uid": "github/byuflowlab/GXBeam.jl", - "url": "https://github.com/byuflowlab/GXBeam.jl", - "rel": "/software/repository/github/byuflowlab/GXBeam.jl", - "avatar": "https://avatars.githubusercontent.com/u/10734941?v=4", - "description": "Pure Julia Implementation of Geometrically Exact Beam Theory", + "uid": "github/skypyproject/skypy", + "url": "https://github.com/skypyproject/skypy", + "rel": "/software/repository/github/skypyproject/skypy", + "avatar": "https://avatars.githubusercontent.com/u/57487530?v=4", + "description": "SkyPy: A package for modelling the Universe.", "topics": [ - "gebt", - "beam-elements", - "finite-element-analysis", - "julia", - "nonlinear" + "astronomy", + "astrophysics", + "cosmology", + "forward-modeling", + "skypy" ] }, { - "uid": "github/dipol-uf/DIPOL-UF", - "url": "https://github.com/dipol-uf/DIPOL-UF", - "rel": "/software/repository/github/dipol-uf/DIPOL-UF", - "avatar": "https://avatars.githubusercontent.com/u/78904164?v=4", - "description": "DIPOL-3", + "uid": "github/david-mathews-1994/deltarice", + "url": "https://github.com/david-mathews-1994/deltarice", + "rel": "/software/repository/github/david-mathews-1994/deltarice", + "avatar": "https://avatars.githubusercontent.com/u/120204754?v=4", + "description": "A high-performance compression library optimized for up-to 16-bit digitized analog signals", "topics": [] }, { - "uid": "github/wanpinglee/MOSAIK", - "url": "https://github.com/wanpinglee/MOSAIK", - "rel": "/software/repository/github/wanpinglee/MOSAIK", - "avatar": "https://avatars.githubusercontent.com/u/419304?v=4", - "description": "reference-guided aligner for next-generation sequencing technologies", + "uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", + "url": "https://github.com/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", + "rel": "/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", + "avatar": "https://avatars.githubusercontent.com/u/85358696?v=4", + "description": "Torque Limited Simple Pendulum Underactuated System", "topics": [] }, { - "uid": "github/AlexMikes/AutoFunc", - "url": "https://github.com/AlexMikes/AutoFunc", - "rel": "/software/repository/github/AlexMikes/AutoFunc", - "avatar": "https://avatars.githubusercontent.com/u/24322176?v=4", - "description": "Data Mining for Automated Functional Representations", + "uid": "github/cicirello/Chips-n-Salsa", + "url": "https://github.com/cicirello/Chips-n-Salsa", + "rel": "/software/repository/github/cicirello/Chips-n-Salsa", + "avatar": "https://avatars3.githubusercontent.com/u/762030?v=4", + "description": "Chips-n-Salsa - A Java library of customizable, hybridizable, iterative, parallel, stochastic, and self-adaptive local search algorithms", "topics": [] }, { - "uid": "github/HUST-NingKang-Lab/ONN4MST", - "url": "https://github.com/HUST-NingKang-Lab/ONN4MST", - "rel": "/software/repository/github/HUST-NingKang-Lab/ONN4MST", - "avatar": "https://avatars.githubusercontent.com/u/24222262?v=4", - "description": "Ontology-aware Neural Network for Mircobiome Data Mining!", - "topics": [ - "neural-network", - "microbiome-model", - "ontology-search" - ] - }, - { - "uid": "github/henrysky/astroNN", - "url": "https://github.com/henrysky/astroNN", - "rel": "/software/repository/github/henrysky/astroNN", - "avatar": "https://avatars.githubusercontent.com/u/28623434?v=4", - "description": "Deep Learning for Astronomers with Tensorflow", + "uid": "github/cicirello/rho-mu", + "url": "https://github.com/cicirello/rho-mu", + "rel": "/software/repository/github/cicirello/rho-mu", + "avatar": "https://avatars.githubusercontent.com/u/762030?v=4", + "description": "\u03c1\u03bc - a Java library of Randomization enHancements and Other Math Utilities", "topics": [ - "tensorflow", - "neural-network", - "python", - "astronomy", - "astrophysics", - "science", - "neural-networks" + "randomizer", + "randomization", + "gaussian", + "cauchy", + "binomial", + "pseudorandom", + "random-numbers" ] }, { - "uid": "github/mattpitkin/lintegrate", - "url": "https://github.com/mattpitkin/lintegrate", - "rel": "/software/repository/github/mattpitkin/lintegrate", - "avatar": "https://avatars.githubusercontent.com/u/1421092?v=4", - "description": "A numerical integration routine that works for the natural logarithm of functions ", + "uid": "github/cosimameyer/overviewR", + "url": "https://github.com/cosimameyer/overviewR", + "rel": "/software/repository/github/cosimameyer/overviewR", + "avatar": "https://avatars.githubusercontent.com/u/7782895?v=4", + "description": "Easily Extracting Information About Your Data", "topics": [ - "integral", - "gsl", - "gsl-functions", - "python", - "wrapper" + "package-development" ] }, { - "uid": "github/mattpitkin/psrqpy", - "url": "https://github.com/mattpitkin/psrqpy", - "rel": "/software/repository/github/mattpitkin/psrqpy", - "avatar": "https://avatars.githubusercontent.com/u/1421092?v=4", - "description": "A python module to query the ATNF pulsar catalogue", + "uid": "github/Deyht/CIANNA", + "url": "https://github.com/Deyht/CIANNA", + "rel": "/software/repository/github/Deyht/CIANNA", + "avatar": "https://avatars.githubusercontent.com/u/21009408?v=4", + "description": "Convolutional Interactive Artificial Neural Networks by/for Astrophysicists", "topics": [ - "pulsar", - "atnf", - "catalogue", - "python" + "deep-neural-networks", + "deep-learning", + "convolutional-neural-networks", + "machine-learning", + "ml", + "astrophysics", + "astronomy", + "neural-network", + "cuda", + "gpu", + "object-detection", + "yolo" ] }, { - "uid": "github/koide3/small_gicp", - "url": "https://github.com/koide3/small_gicp", - "rel": "/software/repository/github/koide3/small_gicp", - "avatar": "https://avatars.githubusercontent.com/u/31344317?v=4", - "description": "Efficient and parallel algorithms for point cloud registration [C++, Python]", + "uid": "github/ParkerLab/ataqv", + "url": "https://github.com/ParkerLab/ataqv", + "rel": "/software/repository/github/ParkerLab/ataqv", + "avatar": "https://avatars.githubusercontent.com/u/10228461?v=4", + "description": "A toolkit for QC and visualization of ATAC-seq results.", "topics": [ - "cpp", - "icp", - "multi-threading", - "pcl", - "pointcloud", - "python", - "registration", - "scan-matching", - "point-cloud-regstration", - "open3d" + "atac-seq", + "quality-control", + "visualization", + "software", + "tool" ] }, { - "uid": "github/h3abionet/genesis2", - "url": "https://github.com/h3abionet/genesis2", - "rel": "/software/repository/github/h3abionet/genesis2", - "avatar": "https://avatars.githubusercontent.com/u/4301625?v=4", - "description": "Implementation of the Genesis 2 tool ", - "topics": [] - }, - { - "uid": "github/johnschwenck/bp", - "url": "https://github.com/johnschwenck/bp", - "rel": "/software/repository/github/johnschwenck/bp", - "avatar": "https://avatars.githubusercontent.com/u/60413604?v=4", - "description": "An R package for analyzing blood pressure data", - "topics": [] - }, - { - "uid": "github/mahulchak/quickmerge", - "url": "https://github.com/mahulchak/quickmerge", - "rel": "/software/repository/github/mahulchak/quickmerge", - "avatar": "https://avatars.githubusercontent.com/u/7537640?v=4", - "description": "A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.", + "uid": "github/ImproPhoto/pymicmac", + "url": "https://github.com/ImproPhoto/pymicmac", + "rel": "/software/repository/github/ImproPhoto/pymicmac", + "avatar": "https://avatars3.githubusercontent.com/u/19147158?v=4", + "description": "Python tools for the MicMac FOSS photogrammetric \"suite\"", "topics": [] }, { - "uid": "github/oncoray/mirp", - "url": "https://github.com/oncoray/mirp", - "rel": "/software/repository/github/oncoray/mirp", - "avatar": "https://avatars.githubusercontent.com/u/51999016?v=4", - "description": "Medical Image Radiomics Processor", + "uid": "github/PEJpOhno/SMiPoly", + "url": "https://github.com/PEJpOhno/SMiPoly", + "rel": "/software/repository/github/PEJpOhno/SMiPoly", + "avatar": "https://avatars.githubusercontent.com/u/88958109?v=4", + "description": "rule-based virtual polymer library generator", "topics": [ - "radiomics", - "image-processing" + "library", + "polymer", + "synthesis" ] }, { - "uid": "github/nanakiksc/zerone", - "url": "https://github.com/nanakiksc/zerone", - "rel": "/software/repository/github/nanakiksc/zerone", - "avatar": "https://avatars.githubusercontent.com/u/5763571?v=4", - "description": "ChIP-seq discretization and quality control", + "uid": "github/athulpg007/AMAT", + "url": "https://github.com/athulpg007/AMAT", + "rel": "/software/repository/github/athulpg007/AMAT", + "avatar": "https://avatars.githubusercontent.com/u/6537239?v=4", + "description": "Home of the Aerocapture Mission Analysis Tool (AMAT). For project documentation visit:", "topics": [] }, { - "uid": "github/paulbrodersen/netgraph", - "url": "https://github.com/paulbrodersen/netgraph", - "rel": "/software/repository/github/paulbrodersen/netgraph", - "avatar": "https://avatars.githubusercontent.com/u/8046146?v=4", - "description": "Publication-quality network visualisations in python", + "uid": "github/ManuelRausch/StatConfR", + "url": "https://github.com/ManuelRausch/StatConfR", + "rel": "/software/repository/github/ManuelRausch/StatConfR", + "avatar": "https://avatars.githubusercontent.com/u/114725315?v=4", + "description": "Development of an R package for metacognition researchers", "topics": [ - "network", - "visualization", - "network-analysis", - "publication-quality-plots", - "graph", - "graph-tool", - "igraph", - "matplotlib", - "network-science", - "networkx", - "python" + "cognitive-modeling", + "information-theory", + "metacognition", + "signal-detection-theory" ] }, { - "uid": "github/ahudde/greeks", - "url": "https://github.com/ahudde/greeks", - "rel": "/software/repository/github/ahudde/greeks", - "avatar": "https://avatars.githubusercontent.com/u/60978072?v=4", - "description": "Sensitivities of Prices of Financial Options and Implied Volatilites", - "topics": [ - "option", - "greeks", - "asian-option", - "r-package", - "implied-volatility" - ] + "uid": "github/andyphilips/dynamac", + "url": "https://github.com/andyphilips/dynamac", + "rel": "/software/repository/github/andyphilips/dynamac", + "avatar": "https://avatars3.githubusercontent.com/u/15617347?v=4", + "description": "Dynamic simulation and testing for single-equation ARDL models, available for both R and Stata", + "topics": [] }, { - "uid": "github/will-rowe/hulk", - "url": "https://github.com/will-rowe/hulk", - "rel": "/software/repository/github/will-rowe/hulk", - "avatar": "https://avatars.githubusercontent.com/u/5321233?v=4", - "description": "Histosketching Using Little Kmers", + "uid": "github/Nadi-System/nadi-system", + "url": "https://github.com/Nadi-System/nadi-system", + "rel": "/software/repository/github/Nadi-System/nadi-system", + "avatar": "https://avatars.githubusercontent.com/u/159494864?v=4", + "description": "Domain Specific Programming language for Network Analysis and Data Integration (NADI) System. The repo contains command line tool, IDE, python library, etc.", "topics": [ - "sketching", - "hashing", - "genomics", - "microbiome" + "domain-specific-language", + "geographical-information-system", + "hydrology", + "network-analysis", + "plugin-system" ] }, { - "uid": "github/will-rowe/groot", - "url": "https://github.com/will-rowe/groot", - "rel": "/software/repository/github/will-rowe/groot", - "avatar": "https://avatars.githubusercontent.com/u/5321233?v=4", - "description": "A resistome profiler for Graphing Resistance Out Of meTagenomes", - "topics": [ - "antibiotic-resistance", - "metagenomics", - "resistome", - "minhash", - "lsh", - "alignment" - ] + "uid": "github/francescoa97outlook/pyExoRaMa", + "url": "https://github.com/francescoa97outlook/pyExoRaMa", + "rel": "/software/repository/github/francescoa97outlook/pyExoRaMa", + "avatar": "https://avatars.githubusercontent.com/u/70694319?v=4", + "description": null, + "topics": [] }, { - "uid": "github/daniel-muthukrishna/astrodash", - "url": "https://github.com/daniel-muthukrishna/astrodash", - "rel": "/software/repository/github/daniel-muthukrishna/astrodash", - "avatar": "https://avatars.githubusercontent.com/u/17826840?v=4", - "description": "Deep learning for the automated spectral classification of supernovae", - "topics": [ - "supernovae", - "deep-learning", - "deep-neural-networks", - "tensorflow", - "machine-learning", - "classification", - "transients", - "pypi", - "astronomy", - "cosmology", - "astrophysics", - "spectra" - ] + "uid": "github/Pas-Kapli/mptp", + "url": "https://github.com/Pas-Kapli/mptp", + "rel": "/software/repository/github/Pas-Kapli/mptp", + "avatar": "https://avatars.githubusercontent.com/u/9498483?v=4", + "description": "mPTP - a tool for single-locus species delimitation", + "topics": [] }, { - "uid": "github/qcxms/QCxMS", - "url": "https://github.com/qcxms/QCxMS", - "rel": "/software/repository/github/qcxms/QCxMS", - "avatar": "https://avatars.githubusercontent.com/u/64989407?v=4", - "description": "Quantum mechanic mass spectrometry calculation program", + "uid": "github/candebellavita/vkompth", + "url": "https://github.com/candebellavita/vkompth", + "rel": "/software/repository/github/candebellavita/vkompth", + "avatar": "https://avatars.githubusercontent.com/u/79205399?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/Xia-Yijie/Xponge", + "url": "https://github.com/Xia-Yijie/Xponge", + "rel": "/software/repository/github/Xia-Yijie/Xponge", + "avatar": "https://avatars.githubusercontent.com/u/70470814?v=4", + "description": "A lightweight and easy to customize python package to perform pre- and post-processing of molecular modelling", "topics": [ - "mass-spectrometry", - "computational-chemistry", "molecular-dynamics", - "computational-mass-spectrometry" + "molecular-modelling" ] }, { - "uid": "github/OpenGene/fastplong", - "url": "https://github.com/OpenGene/fastplong", - "rel": "/software/repository/github/OpenGene/fastplong", - "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", - "description": "Ultra-fast preprocessing and quality control for long-read sequencing data", + "uid": "github/phineasng/DECODE", + "url": "https://github.com/phineasng/DECODE", + "rel": "/software/repository/github/phineasng/DECODE", + "avatar": "https://avatars.githubusercontent.com/u/5710702?v=4", + "description": "Code Release for the DECODE submission (ISMB2022)", "topics": [] }, { - "uid": "github/OpenGene/fastv", - "url": "https://github.com/OpenGene/fastv", - "rel": "/software/repository/github/OpenGene/fastv", - "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", - "description": "An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.", + "uid": "github/TommyJones/tidylda", + "url": "https://github.com/TommyJones/tidylda", + "rel": "/software/repository/github/TommyJones/tidylda", + "avatar": "https://avatars.githubusercontent.com/u/4990978?v=4", + "description": "Implements an algorithim for Latent Dirichlet Allocation using style conventions from the [tidyverse](https://style.tidyverse.org/) and [tidymodels](https://tidymodels.github.io/model-implementation-principles/index.html). ", + "topics": [] + }, + { + "uid": "github/yuliang419/AstroNet-Triage", + "url": "https://github.com/yuliang419/Astronet-Triage", + "rel": "/software/repository/github/yuliang419/AstroNet-Triage", + "avatar": "https://avatars.githubusercontent.com/u/10563003?v=4", + "description": "A Neural Network for TESS Light Curve Triage", + "topics": [] + }, + { + "uid": "github/yuliang419/AstroNet-Vetting", + "url": "https://github.com/yuliang419/Astronet-Vetting", + "rel": "/software/repository/github/yuliang419/AstroNet-Vetting", + "avatar": "https://avatars.githubusercontent.com/u/10563003?v=4", + "description": "A Neural Network for TESS Light Curve Vetting", + "topics": [] + }, + { + "uid": "github/ginolhac/mapDamage", + "url": "https://github.com/ginolhac/mapDamage", + "rel": "/software/repository/github/ginolhac/mapDamage", + "avatar": "https://avatars.githubusercontent.com/u/710181?v=4", + "description": "mapDamage: tracking and quantifying damage patterns in ancient DNA sequences", "topics": [ - "covid-19", - "sars-cov-2", - "hcov", - "2019-ncov", - "sequencing", - "bioinformatics", + "ancient-dna-sequences", "ngs", - "mngs", - "coronavirus", - "covid", - "viral-infectious-diseases", - "viral", - "virus", - "microbial-sequences", - "meta-genomics", - "visualization" + "python", + "r" ] }, { - "uid": "github/OpenGene/fastp", - "url": "https://github.com/OpenGene/fastp", - "rel": "/software/repository/github/OpenGene/fastp", - "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", - "description": "An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)", + "uid": "github/lilyminium/psiresp", + "url": "https://github.com/lilyminium/psiresp", + "rel": "/software/repository/github/lilyminium/psiresp", + "avatar": "https://avatars.githubusercontent.com/u/31115101?v=4", + "description": "RESP with inter- and intra-molecular constraints in Psi4.", "topics": [ - "fastq", - "qc", - "preprocessing", - "filtering", - "adapter", - "overlap", - "quality", - "trimming", - "splitting", - "quality-control", - "filter", - "ngs", - "bioinformatics", - "umi", - "sequencing", - "illumina", - "polyg", - "duplication", - "merging" + "psi4", + "atomic-charges", + "python", + "molecular-dynamics" ] }, { - "uid": "github/OpenGene/repaq", - "url": "https://github.com/OpenGene/repaq", - "rel": "/software/repository/github/OpenGene/repaq", - "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", - "description": "A fast lossless FASTQ compressor with ultra-high compression ratio", + "uid": "github/giuspugl/COnet", + "url": "https://github.com/giuspugl/COnet", + "rel": "/software/repository/github/giuspugl/COnet", + "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", + "description": null, "topics": [] }, { - "uid": "github/mingzehuang/latentcor", - "url": "https://github.com/mingzehuang/latentcor", - "rel": "/software/repository/github/mingzehuang/latentcor", - "avatar": "https://avatars.githubusercontent.com/u/70076112?v=4", - "description": "latentcor is an R package provides estimation for latent correlation with mixed data types (continuous, binary, truncated and ternary).", - "topics": [ - "statistics", - "data-science", - "mixed-types", - "r", - "data-analysis", - "data-mining", - "machine-learning", - "data-structures", - "data-processing" - ] + "uid": "github/giuspugl/picasso", + "url": "https://github.com/giuspugl/picasso", + "rel": "/software/repository/github/giuspugl/picasso", + "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", + "description": "Inpainter for point-sources for Synchrotron and Dust polarization ", + "topics": [] }, { - "uid": "github/temken/obscura", - "url": "https://github.com/temken/obscura", - "rel": "/software/repository/github/temken/obscura", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "A modular C++ tool and library for dark matter direct detection computations for both nuclear and electron recoil experiments.", - "topics": [ - "direct-detection-experiments", - "dark-matter" - ] + "uid": "github/giuspugl/MCMole3D", + "url": "https://github.com/giuspugl/MCMole3D", + "rel": "/software/repository/github/giuspugl/MCMole3D", + "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", + "description": "MonteCarlo Molecular Line Emission 3d.Statistical Model for Galactic Molecular Clouds. For documentation please visit", + "topics": [] }, { - "uid": "github/temken/DaMaSCUS", - "url": "https://github.com/temken/DaMaSCUS", - "rel": "/software/repository/github/temken/DaMaSCUS", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "Dark Matter Simulation Code for Underground Scatterings", - "topics": [ - "montecarlo-simulation", - "directdetection", - "trajectory-simulator", - "particle-physics", - "dark-matter", - "astroparticle-physics" - ] + "uid": "github/giuspugl/fgcluster", + "url": "https://github.com/giuspugl/fgcluster", + "rel": "/software/repository/github/giuspugl/fgcluster", + "avatar": "https://avatars.githubusercontent.com/u/8957029?v=4", + "description": null, + "topics": [] }, { - "uid": "github/temken/Dirac_vs_Majorana", - "url": "https://github.com/temken/Dirac_vs_Majorana", - "rel": "/software/repository/github/temken/Dirac_vs_Majorana", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "Statistical discrimination of sub-GeV Majorana and Dirac dark matter at direct detection experiments.", + "uid": "github/hongwanliu/DarkHistory", + "url": "https://github.com/hongwanliu/DarkHistory", + "rel": "/software/repository/github/hongwanliu/DarkHistory", + "avatar": "https://avatars.githubusercontent.com/u/17276243?v=4", + "description": "A code package for calculating modified cosmic ionization and thermal histories with dark matter and other exotic energy injections", "topics": [] }, { - "uid": "github/temken/DaMaSCUS-CRUST", - "url": "https://github.com/temken/DaMaSCUS-CRUST", - "rel": "/software/repository/github/temken/DaMaSCUS-CRUST", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "Dark Matter Simulation Code for Underground Scatterings - Crust Edition", - "topics": [ - "dark-matter", - "montecarlo-simulation", - "simulation", - "physics-simulation", - "particle-physics", - "trajectory-simulator", - "astroparticle-physics" - ] + "uid": "github/aamedinburgh/igmtransmission", + "url": "https://github.com/aamedinburgh/igmtransmission", + "rel": "/software/repository/github/aamedinburgh/igmtransmission", + "avatar": "https://avatars.githubusercontent.com/u/11682418?v=4", + "description": "Automatically exported from code.google.com/p/igmtransmission", + "topics": [] }, { - "uid": "github/temken/DaMaSCUS-SUN", - "url": "https://github.com/temken/DaMaSCUS-SUN", - "rel": "/software/repository/github/temken/DaMaSCUS-SUN", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "Dark Matter Simulation Code for Underground Scatterings - Sun Edition", + "uid": "github/aasensio/molpop-cep", + "url": "https://github.com/aasensio/molpop-cep", + "rel": "/software/repository/github/aasensio/molpop-cep", + "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", + "description": "Molpop-cep", "topics": [] }, { - "uid": "github/temken/DarkARC", - "url": "https://github.com/temken/DarkARC", - "rel": "/software/repository/github/temken/DarkARC", - "avatar": "https://avatars.githubusercontent.com/u/29034913?v=4", - "description": "Dark Matter-induced Atomic Response Code (DarkARC) - A python tool for the calculation and tabulation of atomic response functions for ionization via dark matter-electron scatterings.", - "topics": [ - "darkmatter", - "atomic-physics", - "directdetection", - "physics" - ] + "uid": "github/aasensio/torchmfbd", + "url": "https://github.com/aasensio/torchmfbd", + "rel": "/software/repository/github/aasensio/torchmfbd", + "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", + "description": null, + "topics": [] }, { - "uid": "github/jls713/tact", - "url": "https://github.com/jls713/tact", - "rel": "/software/repository/github/jls713/tact", - "avatar": "https://avatars.githubusercontent.com/u/12542535?v=4", - "description": "action, angle and frequency estimation using various methods", + "uid": "github/aasensio/sicon", + "url": "https://github.com/aasensio/sicon", + "rel": "/software/repository/github/aasensio/sicon", + "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", + "description": "Deep Learning Assisted Stokes Inversion", "topics": [] }, { - "uid": "github/UBC-Astrophysics/kd-match", - "url": "https://github.com/UBC-Astrophysics/kd-match", - "rel": "/software/repository/github/UBC-Astrophysics/kd-match", - "avatar": "https://avatars.githubusercontent.com/u/12797825?v=4", - "description": "Rapidly matches stellar catalogues", + "uid": "github/aasensio/hazel", + "url": "https://github.com/aasensio/hazel", + "rel": "/software/repository/github/aasensio/hazel", + "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", + "description": "Hazel: synthesis and inversion of Stokes profiles", "topics": [] }, { - "uid": "github/biocore-ntnu/pyranges", - "url": "https://github.com/biocore-ntnu/pyranges", - "rel": "/software/repository/github/biocore-ntnu/pyranges", - "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", - "description": "Performant Pythonic GenomicRanges", + "uid": "github/jdiasn/lidarSuit", + "url": "https://github.com/jdiasn/lidarSuit", + "rel": "/software/repository/github/jdiasn/lidarSuit", + "avatar": "https://avatars.githubusercontent.com/u/11823854?v=4", + "description": "Archived. Please check https://github.com/jdiasn/lidarwind", + "topics": [] + }, + { + "uid": "github/alejandrobll/py-sphviewer", + "url": "https://github.com/alejandrobll/py-sphviewer", + "rel": "/software/repository/github/alejandrobll/py-sphviewer", + "avatar": "https://avatars.githubusercontent.com/u/7341581?v=4", + "description": "Py-SPHViewer is a framework for rendering cosmological simulations in Python using the Smoothed Particle Hydrodynamics scheme.", "topics": [ - "genomicranges", + "py-sphviewer", + "smoothed-particle-hydrodynamics", + "particle-data", "python", - "genomics", - "pandas", - "data-structures" + "visualisation", + "n-body", + "rendering", + "gas", + "sph", + "cosmological", + "simulations", + "clustering", + "neighbors", + "astronomy", + "science", + "science-research", + "parallel", + "openmp", + "python-api" ] }, { - "uid": "github/biocore-ntnu/ncls", - "url": "https://github.com/biocore-ntnu/ncls", - "rel": "/software/repository/github/biocore-ntnu/ncls", - "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", - "description": "The Nested Containment List for Python. Basically a static interval-tree that is silly fast for both construction and lookups.", + "uid": "github/calebclass/Shiny-NanoTube", + "url": "https://github.com/calebclass/Shiny-NanoTube", + "rel": "/software/repository/github/calebclass/Shiny-NanoTube", + "avatar": "https://avatars.githubusercontent.com/u/272631?v=4", + "description": "A web app for easier NanoString gene expression analysis", "topics": [ - "ncls", - "interval-tree", - "overlap-queries", - "python", - "numpy" + "shiny", + "differential-expression", + "nanostring" ] }, { - "uid": "github/biocore-ntnu/epic2", - "url": "https://github.com/biocore-ntnu/epic2", - "rel": "/software/repository/github/biocore-ntnu/epic2", - "avatar": "https://avatars.githubusercontent.com/u/25345003?v=4", - "description": "Ultraperformant reimplementation of SICER", + "uid": "github/fumi-github/omicwas", + "url": "https://github.com/fumi-github/omicwas", + "rel": "/software/repository/github/fumi-github/omicwas", + "avatar": "https://avatars.githubusercontent.com/u/724031?v=4", + "description": "Cell-Type-Specific Disease Association Testing in Bulk Omics Experiments", "topics": [] }, { - "uid": "github/mrirecon/view", - "url": "https://github.com/mrirecon/view", - "rel": "/software/repository/github/mrirecon/view", - "avatar": "https://avatars.githubusercontent.com/u/15148060?v=4", - "description": "Image Viewer for BART", - "topics": [ - "image-viewer", - "bart-toolbox" - ] + "uid": "github/Krona/wiki", + "url": null, + "rel": "/software/repository/github/Krona/wiki", + "avatar": "", + "description": "is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files.", + "topics": [] }, { - "uid": "github/mrirecon/bart", - "url": "https://github.com/mrirecon/bart", - "rel": "/software/repository/github/mrirecon/bart", - "avatar": "https://avatars.githubusercontent.com/u/15148060?v=4", - "description": "BART: Toolbox for Computational Magnetic Resonance Imaging", + "uid": "github/nomad-coe/greenX", + "url": "https://github.com/nomad-coe/greenX", + "rel": "/software/repository/github/nomad-coe/greenX", + "avatar": "https://avatars.githubusercontent.com/u/14835914?v=4", + "description": "Library for Green\u2019s function based electronic structure theory calculations", "topics": [ - "computational-imaging", - "mri", - "iterative-methods", - "compressed-sensing", - "bart-toolbox", - "deep-learning" + "exascale", + "fortran", + "greens-functions" ] }, { - "uid": "github/eabaron/synow", - "url": "https://github.com/eabaron/synow", - "rel": "/software/repository/github/eabaron/synow", - "avatar": "https://avatars.githubusercontent.com/u/12874798?v=4", + "uid": "github/sfschen/spinosaurus", + "url": "https://github.com/sfschen/spinosaurus", + "rel": "/software/repository/github/sfschen/spinosaurus", + "avatar": "https://avatars.githubusercontent.com/u/8505965?v=4", "description": null, "topics": [] }, { - "uid": "github/david-mathews-1994/deltarice", - "url": "https://github.com/david-mathews-1994/deltarice", - "rel": "/software/repository/github/david-mathews-1994/deltarice", - "avatar": "https://avatars.githubusercontent.com/u/120204754?v=4", - "description": "A high-performance compression library optimized for up-to 16-bit digitized analog signals", - "topics": [] - }, - { - "uid": "github/metagenlab/assembly_finder", - "url": "https://github.com/metagenlab/assembly_finder", - "rel": "/software/repository/github/metagenlab/assembly_finder", - "avatar": "https://avatars.githubusercontent.com/u/33333195?v=4", - "description": "snakemake-powered cli to download genomes using NCBI datasets", + "uid": "github/sfschen/velocileptors", + "url": "https://github.com/sfschen/velocileptors", + "rel": "/software/repository/github/sfschen/velocileptors", + "avatar": "https://avatars.githubusercontent.com/u/8505965?v=4", + "description": "A code for velocity-based Lagrangian and Eulerian PT expansions of redshift-space distortions.", "topics": [] }, { - "uid": "github/metagenlab/MeSS", - "url": "https://github.com/metagenlab/MeSS", - "rel": "/software/repository/github/metagenlab/MeSS", - "avatar": "https://avatars.githubusercontent.com/u/33333195?v=4", - "description": "Snakemake pipeline for simulating shotgun metagenomic samples", + "uid": "github/ConnorDonegan/geostan", + "url": "https://github.com/ConnorDonegan/geostan", + "rel": "/software/repository/github/ConnorDonegan/geostan", + "avatar": "https://avatars.githubusercontent.com/u/24845033?v=4", + "description": "Bayesian spatial analysis", "topics": [ - "bioinformatics", - "shotgun-metagenomics", - "snakemake-workflow" + "stan", + "bayesian", + "spatial", + "epidemiology", + "public-health", + "r-package", + "bayesian-inference", + "rspatial", + "r", + "modeling", + "rstats", + "bayesian-statistics" ] }, { - "uid": "github/david-bogdan-r/ARTEMIS", - "url": "https://github.com/david-bogdan-r/ARTEMIS", - "rel": "/software/repository/github/david-bogdan-r/ARTEMIS", - "avatar": "https://avatars.githubusercontent.com/u/89922494?v=4", - "description": null, + "uid": "github/IftachSadeh/ANNZ", + "url": "https://github.com/IftachSadeh/ANNZ", + "rel": "/software/repository/github/IftachSadeh/ANNZ", + "avatar": "https://avatars.githubusercontent.com/u/7607021?v=4", + "description": "Machine learning methods for astrophysics (photometric redshift and PDF estimation, star/galaxy classification etc.)", "topics": [] }, { - "uid": "github/bblodfon/emba", - "url": "https://github.com/bblodfon/emba", - "rel": "/software/repository/github/bblodfon/emba", - "avatar": "https://avatars2.githubusercontent.com/u/10909555?v=4", - "description": "Ensemble Model Biomarker Analysis R package", - "topics": [ - "r", - "r-package", - "biomarkers", - "ensemble-models" - ] + "uid": "github/scottgigante/picopore", + "url": "https://github.com/scottgigante/picopore", + "rel": "/software/repository/github/scottgigante/picopore", + "avatar": "https://avatars.githubusercontent.com/u/8499679?v=4", + "description": "A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information", + "topics": [] }, { - "uid": "github/krober10nd/SeismicMesh", - "url": "https://github.com/krober10nd/SeismicMesh", - "rel": "/software/repository/github/krober10nd/SeismicMesh", - "avatar": "https://avatars.githubusercontent.com/u/18619644?v=4", - "description": "2D/3D serial and parallel triangular mesh generation tool for Finite Element Methods.", + "uid": "github/silkemaes/MACE", + "url": "https://github.com/silkemaes/MACE", + "rel": "/software/repository/github/silkemaes/MACE", + "avatar": "https://avatars.githubusercontent.com/u/25978534?v=4", + "description": "MACE, a Machine-learning Approach to Chemistry Emulation", "topics": [ - "meshing", - "seismic-velocity-models", - "parallel", - "distmesh" + "astrochemistry", + "autoencoder", + "machine-learning", + "astrophysics", + "simulation" ] }, { - "uid": "github/gtonkinhill/fastbaps", - "url": "https://github.com/gtonkinhill/fastbaps", - "rel": "/software/repository/github/gtonkinhill/fastbaps", - "avatar": "https://avatars.githubusercontent.com/u/10625107?v=4", - "description": "A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data", + "uid": "github/Basvanstein/GSAreport", + "url": "https://github.com/Basvanstein/GSAreport", + "rel": "/software/repository/github/Basvanstein/GSAreport", + "avatar": "https://avatars.githubusercontent.com/u/3687311?v=4", + "description": "Global Sensitivity reporting for Explainable AI", "topics": [ - "bayesian", - "hierarchical-clustering", - "genetics" + "explainable-ai", + "machine-learning", + "python", + "sensitivity-analysis" ] }, { - "uid": "github/christopherlovell/sengi", - "url": "https://github.com/christopherlovell/sengi", - "rel": "/software/repository/github/christopherlovell/sengi", - "avatar": "https://avatars.githubusercontent.com/u/4648092?v=4", - "description": "A small, fast, interactive viewer for SPS spectral outputs", - "topics": [] + "uid": "github/mpokorny/vysmaw", + "url": "https://github.com/mpokorny/vysmaw", + "rel": "/software/repository/github/mpokorny/vysmaw", + "avatar": "https://avatars.githubusercontent.com/u/794498?v=4", + "description": "Fast visibility stream muncher", + "topics": [ + "cython", + "infiniband", + "data-stream", + "spectra", + "c", + "correlators" + ] }, { - "uid": "github/Ramialison-Lab-ARMI/3DCardiomics", - "url": "https://github.com/Ramialison-Lab-ARMI/3DCardiomics", - "rel": "/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", - "avatar": "https://avatars2.githubusercontent.com/u/11384379?v=4", - "description": "A visual system for the exploration of cardiac transcriptome data", + "uid": "github/MiguelEA/nudec_BSM", + "url": "https://github.com/MiguelEA/nudec_BSM", + "rel": "/software/repository/github/MiguelEA/nudec_BSM", + "avatar": "https://avatars.githubusercontent.com/u/22373656?v=4", + "description": "Neutrino Decoupling Beyond the Standard Model", "topics": [] }, { - "uid": "github/p-slash/qsonic", - "url": "https://github.com/p-slash/qsonic", - "rel": "/software/repository/github/p-slash/qsonic", - "avatar": "https://avatars.githubusercontent.com/u/5559154?v=4", - "description": "Continuum fitting for DESI", + "uid": "github/pysersic/pysersic", + "url": "https://github.com/pysersic/pysersic", + "rel": "/software/repository/github/pysersic/pysersic", + "avatar": "https://avatars.githubusercontent.com/u/123014513?v=4", + "description": "Bayesian fitting of Sersic profiles to galaxy images accelerated with jax", "topics": [] }, { - "uid": "github/susiegriggo/Phynteny_transformer", - "url": "https://github.com/susiegriggo/Phynteny_transformer", - "rel": "/software/repository/github/susiegriggo/Phynteny_transformer", - "avatar": "https://avatars.githubusercontent.com/u/54240311?v=4", - "description": "Synteny-enhanced annotation of Bacteriophage genes", + "uid": "github/524D/compareMS2", + "url": "https://github.com/524D/compareMS2", + "rel": "/software/repository/github/524D/compareMS2", + "avatar": "https://avatars.githubusercontent.com/u/50015273?v=4", + "description": "Compare samples by MS2 spectra", "topics": [] }, { - "uid": "github/jranalli/solartoolbox", - "url": "https://github.com/jranalli/solarspatialtools", - "rel": "/software/repository/github/jranalli/solartoolbox", - "avatar": "https://avatars.githubusercontent.com/u/7864460?v=4", - "description": "Library of tools used to support spatial analyses of solar energy", - "topics": [] + "uid": "github/ronnyerrmann/HiFLEx", + "url": "https://github.com/ronnyerrmann/HiFLEx", + "rel": "/software/repository/github/ronnyerrmann/HiFLEx", + "avatar": "https://avatars.githubusercontent.com/u/36272471?v=4", + "description": "Pipeline to reduce echelle data (taken with a single or bifurcated fiber input)", + "topics": [ + "data-reduction", + "echelle", + "spectroscopy", + "python", + "wavelength-solution", + "serval", + "ceres", + "terra" + ] }, { - "uid": "github/biboyd/SALSA", - "url": "https://github.com/biboyd/SALSA", - "rel": "/software/repository/github/biboyd/SALSA", - "avatar": "https://avatars0.githubusercontent.com/u/42776109?v=4", - "description": "Salsa is a Python package for constructing synthetic absorber catalogs from astrophysical hydrodynamic simulations", - "topics": [] + "uid": "github/stingraysoftware/stingray", + "url": "https://github.com/StingraySoftware/stingray", + "rel": "/software/repository/github/stingraysoftware/stingray", + "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", + "description": "Anything can happen in the next half hour (including spectral timing made easy)!", + "topics": [ + "x-ray", + "astronomy", + "blackhole", + "pulsars", + "timeseries", + "astrophysics", + "fourier-analysis", + "fourier-transform", + "time-series", + "time-series-analysis", + "x-ray-binaries", + "neutronstars", + "data-analysis", + "blackholes", + "hacktoberfest" + ] }, { - "uid": "github/mpc-bioinformatics/CalibraCurve", - "url": "https://github.com/mpc-bioinformatics/CalibraCurve", - "rel": "/software/repository/github/mpc-bioinformatics/CalibraCurve", - "avatar": "https://avatars1.githubusercontent.com/u/6215764?v=4", - "description": "CalibraCurve", + "uid": "github/sieunhanbom04/support-exploration-matrix-factorization", + "url": "https://github.com/sieunhanbom04/support-exploration-matrix-factorization", + "rel": "/software/repository/github/sieunhanbom04/support-exploration-matrix-factorization", + "avatar": "https://avatars.githubusercontent.com/u/31831447?v=4", + "description": "Code for the paper \"Structured support exploration for multi-layer sparse matrix factorization\" - ICASSP 2020", "topics": [] }, { - "uid": "github/PetervanLunteren/EcoAssist", - "url": "https://github.com/PetervanLunteren/EcoAssist", - "rel": "/software/repository/github/PetervanLunteren/EcoAssist", - "avatar": "https://avatars.githubusercontent.com/u/85185478?v=4", - "description": "Train and deploy custom YOLOv5 species classifiers for camera trap images based around the MegaDetector model", + "uid": "github/polca/pathways", + "url": "https://github.com/polca/pathways", + "rel": "/software/repository/github/polca/pathways", + "avatar": "https://avatars.githubusercontent.com/u/58623740?v=4", + "description": "Scenario-wide Life Cycle Assessment", "topics": [ - "linux", - "macos", - "megadetector", - "python", - "windows", - "cameratraps", - "object-detection", - "yolov5", - "annotation-tool", - "deploy", - "machine-learning", - "train", - "conservation", - "ecology" + "energy", + "lca", + "prospective", + "scenario" ] }, { - "uid": "github/sorenwacker/ProteomicsQC", - "url": "https://github.com/sorenwacker/ProteomicsQC", - "rel": "/software/repository/github/sorenwacker/ProteomicsQC", - "avatar": "https://avatars.githubusercontent.com/u/3391614?v=4", - "description": "Quality Control Pipeline Server for quantitative Proteomics", + "uid": "github/polca/unfold", + "url": "https://github.com/polca/unfold", + "rel": "/software/repository/github/polca/unfold", + "avatar": "https://avatars.githubusercontent.com/u/58623740?v=4", + "description": "UNpacking For scenariO-based Lca Databases", "topics": [ - "proteomics", - "pipeline", - "server", - "api", - "docker-compose" + "ecoinvent", + "premise", + "prospective", + "scenario" ] }, { - "uid": "github/vembrane/vembrane", - "url": "https://github.com/vembrane/vembrane", - "rel": "/software/repository/github/vembrane/vembrane", - "avatar": "https://avatars.githubusercontent.com/u/68063743?v=4", - "description": "vembrane filters VCF records using python expressions", + "uid": "github/liulizhi1996/HPODNets", + "url": "https://github.com/liulizhi1996/HPODNets", + "rel": "/software/repository/github/liulizhi1996/HPODNets", + "avatar": "https://avatars.githubusercontent.com/u/30016094?v=4", + "description": "HPODNets: deep graph convolutional networks for predicting human protein-phenotype associations", "topics": [ - "bioinformatics", - "filter", - "filter-expression", - "vcf", - "vcf-filtering" + "graph-convolutional-network", + "human-phenotype-ontology" ] }, { - "uid": "github/lh3/bioawk", - "url": "https://github.com/lh3/bioawk", - "rel": "/software/repository/github/lh3/bioawk", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "BWK awk modified for biological data", - "topics": [ - "bioinformatics", - "sequence-analysis" - ] + "uid": "github/parsotat/batanalysis", + "url": "https://github.com/parsotat/BatAnalysis", + "rel": "/software/repository/github/parsotat/batanalysis", + "avatar": "https://avatars.githubusercontent.com/u/25468716?v=4", + "description": "A python HEASOFT wrapper for processing Swift-BAT data.", + "topics": [] }, { - "uid": "github/lh3/minimap2", - "url": "https://github.com/lh3/minimap2", - "rel": "/software/repository/github/lh3/minimap2", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "A versatile pairwise aligner for genomic and spliced nucleotide sequences", + "uid": "github/souradipp76/MM-PoE", + "url": "https://github.com/souradipp76/MM-PoE", + "rel": "/software/repository/github/souradipp76/MM-PoE", + "avatar": "https://avatars.githubusercontent.com/u/20797533?v=4", + "description": "Multiple Choice Reasoning via. Process of Elimination using Multi-Modal Models", "topics": [ - "bioinformatics", - "sequence-alignment", - "spliced-alignment", - "genomics" + "inference", + "llm", + "multi-modal", + "question-answering" ] }, { - "uid": "github/lh3/wgsim", - "url": "https://github.com/lh3/wgsim", - "rel": "/software/repository/github/lh3/wgsim", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "Reads simulator", + "uid": "github/souradipp76/ReadMeReady", + "url": "https://github.com/souradipp76/ReadMeReady", + "rel": "/software/repository/github/souradipp76/ReadMeReady", + "avatar": "https://avatars.githubusercontent.com/u/20797533?v=4", + "description": "Tool for auto-generating README documentation for code repositories", "topics": [ - "bioinformatics", - "genomics" + "fine-tuning", + "llm", + "qlora", + "retrieval-augmented-generation" ] }, { - "uid": "github/lh3/bgt", - "url": "https://github.com/lh3/bgt", - "rel": "/software/repository/github/lh3/bgt", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "Flexible genotype query among 30,000+ samples whole-genome", - "topics": [ - "bioinformatics", - "genomics" - ] + "uid": "github/Libsharp/libsharp", + "url": "https://github.com/Libsharp/libsharp", + "rel": "/software/repository/github/Libsharp/libsharp", + "avatar": "https://avatars.githubusercontent.com/u/33892807?v=4", + "description": "Library for fast spherical harmonic transforms, see http://arxiv.org/abs/1303.4945", + "topics": [] }, { - "uid": "github/lh3/seqtk", - "url": "https://github.com/lh3/seqtk", - "rel": "/software/repository/github/lh3/seqtk", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "Toolkit for processing sequences in FASTA/Q formats", + "uid": "github/tensorlayer/tensorlayer", + "url": "https://github.com/tensorlayer/TensorLayer", + "rel": "/software/repository/github/tensorlayer/tensorlayer", + "avatar": "https://avatars.githubusercontent.com/u/32261543?v=4", + "description": "Deep Learning and Reinforcement Learning Library for Scientists and Engineers ", "topics": [ - "bioinformatics", - "sequence-analysis" + "tensorlayer", + "deep-learning", + "tensorflow", + "neural-network", + "reinforcement-learning", + "artificial-intelligence", + "gan", + "a3c", + "tensorflow-tutorials", + "dqn", + "object-detection", + "chatbot", + "python", + "tensorflow-tutorial", + "imagenet", + "google" ] }, { - "uid": "github/lh3/miniasm", - "url": "https://github.com/lh3/miniasm", - "rel": "/software/repository/github/lh3/miniasm", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "Ultrafast de novo assembly for long noisy reads (though having no consensus step)", - "topics": [ - "bioinformatics", - "genomics", - "denovo-assembly" - ] + "uid": "github/MRCIEU/metaboprep", + "url": "https://github.com/MRCIEU/metaboprep", + "rel": "/software/repository/github/MRCIEU/metaboprep", + "avatar": "https://avatars.githubusercontent.com/u/15654827?v=4", + "description": "a pipeline of metabolomics data processing and quality control", + "topics": [] }, { - "uid": "github/lh3/fermi-lite", - "url": "https://github.com/lh3/fermi-lite", - "rel": "/software/repository/github/lh3/fermi-lite", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "Standalone C library for assembling Illumina short reads in small regions", + "uid": "github/MRCIEU/PHESANT", + "url": "https://github.com/MRCIEU/PHESANT", + "rel": "/software/repository/github/MRCIEU/PHESANT", + "avatar": "https://avatars.githubusercontent.com/u/15654827?v=4", + "description": "PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank", + "topics": [] + }, + { + "uid": "github/wullm/zwindstroom", + "url": "https://github.com/wullm/zwindstroom", + "rel": "/software/repository/github/wullm/zwindstroom", + "avatar": "https://avatars.githubusercontent.com/u/13404568?v=4", + "description": "Library for cosmic neutrino calculations", + "topics": [] + }, + { + "uid": "github/wullm/fastdf", + "url": "https://github.com/wullm/fastdf", + "rel": "/software/repository/github/wullm/fastdf", + "avatar": "https://avatars.githubusercontent.com/u/13404568?v=4", + "description": "Integrate neutrino geodesics in linear theory.", + "topics": [] + }, + { + "uid": "github/Cascella-Group-UiO/HyMD", + "url": "https://github.com/Cascella-Group-UiO/HyMD", + "rel": "/software/repository/github/Cascella-Group-UiO/HyMD", + "avatar": "https://avatars.githubusercontent.com/u/63226974?v=4", + "description": "Massively parallel hybrid particle-field molecular dynamics in Python.", "topics": [ - "bioinformatics", - "genomics", - "denovo-assembly" + "hybrid-particle-field", + "coarse-grained", + "chemistry", + "physics", + "molecular-dynamics" ] }, { - "uid": "github/lh3/bfc", - "url": "https://github.com/lh3/bfc", - "rel": "/software/repository/github/lh3/bfc", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "High-performance error correction for Illumina resequencing data", + "uid": "github/Sm00thix/IKPLS", + "url": "https://github.com/Sm00thix/IKPLS", + "rel": "/software/repository/github/Sm00thix/IKPLS", + "avatar": "https://avatars.githubusercontent.com/u/12599803?v=4", + "description": "Fast CPU and GPU Python implementations of Improved Kernel PLS by Dayal and MacGregor (1997) and Shortcutting Cross-Validation by Engstr\u00f8m (2024).", "topics": [ - "bioinformatics", - "genomics" + "data-science", + "gpu-support", + "linear-regression", + "partial-least-squares", + "partial-least-squares-regression", + "pls", + "plsda", + "plsr", + "algorithm", + "tpu-acceleration" ] }, { - "uid": "github/lh3/bedtk", - "url": "https://github.com/lh3/bedtk", - "rel": "/software/repository/github/lh3/bedtk", - "avatar": "https://avatars.githubusercontent.com/u/480346?v=4", - "description": "A simple toolset for BED files (warning: CLI may change before bedtk becomes stable)", + "uid": "github/vferat/pycrostates", + "url": "https://github.com/vferat/pycrostates", + "rel": "/software/repository/github/vferat/pycrostates", + "avatar": "https://avatars.githubusercontent.com/u/28844486?v=4", + "description": null, "topics": [ - "bioinformatics" + "eeg", + "eeg-analysis" ] }, { - "uid": "github/XSLiuLab/Seq2Neo", - "url": "https://github.com/XSLiuLab/Seq2Neo", - "rel": "/software/repository/github/XSLiuLab/Seq2Neo", - "avatar": "https://avatars.githubusercontent.com/u/32289723?v=4", - "description": "Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction", + "uid": "github/alexlewin24/BLSEM", + "url": "https://github.com/alexlewin24/BLSEM", + "rel": "/software/repository/github/alexlewin24/BLSEM", + "avatar": "https://avatars.githubusercontent.com/u/52714163?v=4", + "description": "R package for Bayesian Path Analysis with Variable Selection", "topics": [] }, { - "uid": "github/MaceKuailv/seaduck", - "url": "https://github.com/MaceKuailv/seaduck", - "rel": "/software/repository/github/MaceKuailv/seaduck", - "avatar": "https://avatars.githubusercontent.com/u/52629492?v=4", - "description": "A python package that interpolates data from ocean dataset from both Eulerian and Lagrangian perspective.", + "uid": "github/msaland/THInCR-Suite", + "url": "https://github.com/msaland/THInCR-Suite", + "rel": "/software/repository/github/msaland/THInCR-Suite", + "avatar": "https://avatars.githubusercontent.com/u/101999143?v=4", + "description": null, "topics": [] }, { - "uid": "github/tpapp/MCMCDiagnostics.jl", - "url": "https://github.com/tpapp/MCMCDiagnostics.jl", - "rel": "/software/repository/github/tpapp/MCMCDiagnostics.jl", - "avatar": "https://avatars.githubusercontent.com/u/84122?v=4", - "description": "Markov Chain Monte Carlo convergence diagnostics in Julia", + "uid": "github/hfarias/mask_galaxy", + "url": "https://github.com/hfarias/mask_galaxy", + "rel": "/software/repository/github/hfarias/mask_galaxy", + "avatar": "https://avatars.githubusercontent.com/u/1410657?v=4", + "description": "Morphological segmentation of Galaxies", "topics": [ - "julia", - "julia-language", - "bayesian", - "bayesian-statistics", - "bayesian-methods", - "bayesian-inference" + "computer-vision", + "mask-rcnn", + "astroinformatics", + "astronomy" ] }, { - "uid": "github/afukushima/DiffCorr", - "url": "https://github.com/afukushima/DiffCorr", - "rel": "/software/repository/github/afukushima/DiffCorr", - "avatar": "https://avatars.githubusercontent.com/u/1477136?v=4", - "description": null, + "uid": "github/yukiteruono/pbsim2", + "url": "https://github.com/yukiteruono/pbsim2", + "rel": "/software/repository/github/yukiteruono/pbsim2", + "avatar": "https://avatars.githubusercontent.com/u/17718124?v=4", + "description": "PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores", "topics": [] }, { - "uid": "github/ReGIS-org/regis-v2", - "url": "https://github.com/ReGIS-org/regis-v2", - "rel": "/software/repository/github/ReGIS-org/regis-v2", - "avatar": "https://avatars3.githubusercontent.com/u/32134501?v=4", - "description": "Angular-4 and cesiumjs based.", + "uid": "github/hpc4cmb/toast", + "url": "https://github.com/hpc4cmb/toast", + "rel": "/software/repository/github/hpc4cmb/toast", + "avatar": "https://avatars.githubusercontent.com/u/19177696?v=4", + "description": "Time Ordered Astrophysics Scalable Tools", "topics": [] }, { - "uid": "github/ArgoCanada/argodata", - "url": "https://github.com/ArgoCanada/argodata", - "rel": "/software/repository/github/ArgoCanada/argodata", - "avatar": "https://avatars.githubusercontent.com/u/63421088?v=4", - "description": "Download Argo Ocean Float Data", + "uid": "github/ucsbdeepspace/tripp_pipeline", + "url": "https://github.com/ucsbdeepspace/tripp_pipeline", + "rel": "/software/repository/github/ucsbdeepspace/tripp_pipeline", + "avatar": "https://avatars.githubusercontent.com/u/5273399?v=4", + "description": "TRIPP", "topics": [] }, { - "uid": "github/Samreay/Marz", - "url": "https://github.com/Samreay/Marz", - "rel": "/software/repository/github/Samreay/Marz", - "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", - "description": "The Marz redshifting program is intended for use in cosmology surveys, specifically for the OzDES team.", - "topics": [] + "uid": "github/LSARP/ProteomicsQC", + "url": "https://github.com/LSARP/ProteomicsQC", + "rel": "/software/repository/github/LSARP/ProteomicsQC", + "avatar": "https://avatars.githubusercontent.com/u/43147062?v=4", + "description": "Quality Control Pipeline Server for quantitative Proteomics", + "topics": [ + "proteomics", + "proteomics-data", + "proteomics-data-analysis", + "quality-control", + "pipelines", + "pipeline-framework", + "docker-compose" + ] }, { - "uid": "github/Samreay/Barry", - "url": "https://github.com/Samreay/Barry", - "rel": "/software/repository/github/Samreay/Barry", - "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", - "description": "BAO Model Fitting Made Easy", - "topics": [] + "uid": "github/fredericlemoine/goalign", + "url": "https://github.com/evolbioinfo/goalign", + "rel": "/software/repository/github/fredericlemoine/goalign", + "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", + "description": "Goalign is a set of command line tools and an API to manipulate multiple alignments. It is implemented in Go language.", + "topics": [ + "phylogeny", + "alignment", + "phylip", + "fasta", + "phylip-alignment", + "nexus" + ] }, { - "uid": "github/Samreay/ChainConsumer", - "url": "https://github.com/Samreay/ChainConsumer", - "rel": "/software/repository/github/Samreay/ChainConsumer", - "avatar": "https://avatars.githubusercontent.com/u/6748505?v=4", - "description": "Corner plots, LaTeX tables and plotting walks.", + "uid": "github/adrijd/beamconv", + "url": "https://github.com/AdriJD/beamconv", + "rel": "/software/repository/github/adrijd/beamconv", + "avatar": "https://avatars.githubusercontent.com/u/14160114?v=4", + "description": "Code library to simulate CMB detector data with realistic optics-related contributions", "topics": [] }, { - "uid": "github/tensorly/viz", - "url": "https://github.com/tensorly/viz", - "rel": "/software/repository/github/tensorly/viz", - "avatar": "https://avatars.githubusercontent.com/u/22989719?v=4", - "description": "Easy visualization and evaluation of matrix and tensor factorization models", + "uid": "github/stefanradev93/BayesFlow", + "url": "https://github.com/stefanradev93/BayesFlow", + "rel": "/software/repository/github/stefanradev93/BayesFlow", + "avatar": "https://avatars.githubusercontent.com/u/22372377?v=4", + "description": "A Python library for amortized Bayesian workflows using generative neural networks.", "topics": [ - "tensor-methods", - "tensorly", - "tensors", - "visualization" + "bayesian-inference", + "deep-learning", + "model-comparison", + "amortized-inference", + "simulation-based", + "invertible-networks", + "parameter-estimation", + "likelihood-free", + "uncertainty-quantification" ] }, { - "uid": "github/actris-cloudnet/mwrpy", - "url": "https://github.com/actris-cloudnet/mwrpy", - "rel": "/software/repository/github/actris-cloudnet/mwrpy", - "avatar": "https://avatars.githubusercontent.com/u/52170164?v=4", - "description": "Python package for Microwave Radiometer processing in ACTRIS ", + "uid": "github/LeoEgidi/pivmet", + "url": "https://github.com/LeoEgidi/pivmet", + "rel": "/software/repository/github/LeoEgidi/pivmet", + "avatar": "https://avatars.githubusercontent.com/u/17299373?v=4", + "description": "pivmet: an R package proposing pivotal methods for consensus clustering and mixture modeling", "topics": [] }, { - "uid": "github/actris-cloudnet/cloudnetpy", - "url": "https://github.com/actris-cloudnet/cloudnetpy", - "rel": "/software/repository/github/actris-cloudnet/cloudnetpy", - "avatar": "https://avatars3.githubusercontent.com/u/52170164?v=4", - "description": "Python package for Cloudnet data processing ", - "topics": [] + "uid": "github/project-lighter/lighter", + "url": "https://github.com/project-lighter/lighter", + "rel": "/software/repository/github/project-lighter/lighter", + "avatar": "https://avatars.githubusercontent.com/u/122651785?v=4", + "description": "Streamline deep learning experiments using config files", + "topics": [ + "classification", + "config", + "monai", + "object-detection", + "pytorch", + "pytorch-lightning", + "segmentation", + "self-supervised-learning", + "hydra", + "yaml", + "deep-learning" + ] }, { - "uid": "github/hanyue36/nanoplexer", - "url": "https://github.com/hanyue36/nanoplexer", - "rel": "/software/repository/github/hanyue36/nanoplexer", - "avatar": "https://avatars.githubusercontent.com/u/8010327?v=4", - "description": "Tool for demultiplexing Nanopore barcode sequence data", + "uid": "github/opencobra/cobrapy", + "url": "https://github.com/opencobra/cobrapy", + "rel": "/software/repository/github/opencobra/cobrapy", + "avatar": "https://avatars.githubusercontent.com/u/2708410?v=4", + "description": "COBRApy is a package for constraint-based modeling of metabolic networks.", "topics": [ + "modeling", + "metabolic-models", + "metabolic-network", + "metabolism", + "flux", "bioinformatics", - "genomics", - "nanopore", - "barcode" + "biochemistry", + "computational-biology", + "systems-biology", + "cell-design", + "strain-engineering", + "python", + "cobra", + "sbml", + "sbml-model", + "sbml-simulation" ] }, { - "uid": "github/FaaSr/FaaSr-package", - "url": "https://github.com/FaaSr/FaaSr-package", - "rel": "/software/repository/github/FaaSr/FaaSr-package", - "avatar": "https://avatars.githubusercontent.com/u/136644711?v=4", - "description": "Function-as-a-Service package for R", + "uid": "github/milanofthe/pathsim", + "url": "https://github.com/milanofthe/pathsim", + "rel": "/software/repository/github/milanofthe/pathsim", + "avatar": "https://avatars.githubusercontent.com/u/105657697?v=4", + "description": "A differentiable block-based time domain hybrid system simulation framework.", + "topics": [ + "blockdiagram", + "control-systems", + "hierarchical-modeling", + "nonlinear-dynamics", + "simulation", + "system-simulation", + "transient-analysis", + "simulation-framework", + "python", + "framework", + "automatic-differentiation", + "differentiable-simulations" + ] + }, + { + "uid": "github/hsergi/Roman_Coronagraph_ETC", + "url": "https://github.com/hsergi/Roman_Coronagraph_ETC", + "rel": "/software/repository/github/hsergi/Roman_Coronagraph_ETC", + "avatar": "https://avatars.githubusercontent.com/u/883244?v=4", + "description": "Exposure Time Calculator for the Roman Coronagraph Instrument", "topics": [] }, { - "uid": "github/ThibaultFillion/strengths", - "url": "https://github.com/ThibaultFillion/strengths", - "rel": "/software/repository/github/ThibaultFillion/strengths", - "avatar": "https://avatars.githubusercontent.com/u/145604448?v=4", - "description": "inhomogeneous reaction diffusion python package", + "uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", + "url": "https://github.com/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", + "rel": "/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", + "avatar": "https://avatars.githubusercontent.com/u/67900459?v=4", + "description": null, "topics": [] }, { - "uid": "github/r-spatial/rgee", - "url": "https://github.com/r-spatial/rgee", - "rel": "/software/repository/github/r-spatial/rgee", - "avatar": "https://avatars3.githubusercontent.com/u/25086656?v=4", - "description": "Google Earth Engine for R", + "uid": "github/ymocquar/HOODESolver.jl", + "url": "https://github.com/ymocquar/HOODESolver.jl", + "rel": "/software/repository/github/ymocquar/HOODESolver.jl", + "avatar": "https://avatars.githubusercontent.com/u/22094571?v=4", + "description": "High Oscillatory Ordinary Differential Equation Solver (write in Julia language)", "topics": [ - "earth-engine", - "googleearthengine", - "google-earth-engine", - "r", - "spatial-data", - "spatial-analysis", - "earthengine" + "julia", + "high-oscillatory", + "fft", + "ode-solver", + "adams-bashforth-methods" ] }, { - "uid": "github/beebdev/HARU", - "url": "https://github.com/beebdev/HARU", - "rel": "/software/repository/github/beebdev/HARU", - "avatar": "https://avatars.githubusercontent.com/u/79354485?v=4", - "description": "Hardware Accelerated Read Until", + "uid": "github/StephenJHardy/SL1M", + "url": "https://github.com/StephenJHardy/SL1M", + "rel": "/software/repository/github/StephenJHardy/SL1M", + "avatar": "https://avatars.githubusercontent.com/u/4343871?v=4", + "description": "Radio Synthesis Deconvolution using L1 Minimisation", "topics": [] }, { - "uid": "github/plotly/dash", - "url": "https://github.com/plotly/dash", - "rel": "/software/repository/github/plotly/dash", - "avatar": "https://avatars2.githubusercontent.com/u/5997976?v=4", - "description": "Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.", - "topics": [ - "dash", - "plotly", - "data-visualization", - "data-science", - "gui-framework", - "flask", - "react", - "python", - "finance", - "bioinformatics", - "technical-computing", - "charting", - "plotly-dash", - "web-app", - "productivity", - "no-javascript", - "modeling", - "r", - "rstats", - "jupyter" - ] - }, - { - "uid": "github/danielhuson/jloda", - "url": "https://github.com/husonlab/jloda", - "rel": "/software/repository/github/danielhuson/jloda", - "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", - "description": "JLODA - Java library of data structures and algorithms", + "uid": "github/barklem/abo-cross", + "url": "https://github.com/barklem/abo-cross", + "rel": "/software/repository/github/barklem/abo-cross", + "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", + "description": "Interpolate in Anstee-Barklem-O'Mara cross sections for collisional broadening due to hydrogen", "topics": [] }, { - "uid": "github/danielhuson/malt", - "url": "https://github.com/husonlab/malt", - "rel": "/software/repository/github/danielhuson/malt", - "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", - "description": "MEGAN alignment tool", + "uid": "github/barklem/mswavef", + "url": "https://github.com/barklem/mswavef", + "rel": "/software/repository/github/barklem/mswavef", + "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", + "description": "Code to calculate hydrogenic and non-hydrogenic momentum-space electronic wavefunctions", "topics": [] }, { - "uid": "github/danielhuson/dendroscope3", - "url": "https://github.com/husonlab/dendroscope3", - "rel": "/software/repository/github/danielhuson/dendroscope3", - "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", - "description": "Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks", + "uid": "github/barklem/kaulakys", + "url": "https://github.com/barklem/kaulakys", + "rel": "/software/repository/github/barklem/kaulakys", + "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", + "description": "Code to calculate cross sections and rate coefficients for inelastic collisions between Rydberg atoms and hydrogen atoms according to the free electron model of Kaulakys (1986, 1991).", "topics": [] }, { - "uid": "github/danielhuson/megan-ce", - "url": "https://github.com/husonlab/megan-ce", - "rel": "/software/repository/github/danielhuson/megan-ce", - "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", - "description": "MEGAN Community Edition", + "uid": "github/barklem/hlinop", + "url": "https://github.com/barklem/hlinop", + "rel": "/software/repository/github/barklem/hlinop", + "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", + "description": "Codes for modelling hydrogen line opacity in stellar atmospheres. See Barklem & Piskunov (2003)", "topics": [] }, { - "uid": "github/GalacticDynamics-Oxford/Agama", - "url": "https://github.com/GalacticDynamics-Oxford/Agama", - "rel": "/software/repository/github/GalacticDynamics-Oxford/Agama", - "avatar": "https://avatars.githubusercontent.com/u/9365694?v=4", - "description": "Action-based galaxy modeling framework", + "uid": "github/longfei8533/SDC", + "url": "https://github.com/longfei8533/SDC", + "rel": "/software/repository/github/longfei8533/SDC", + "avatar": "https://avatars.githubusercontent.com/u/37660840?v=4", + "description": "Sex Differences in Cancer", "topics": [] }, { - "uid": "github/0xCoto/Virgo", - "url": "https://github.com/0xCoto/Virgo", - "rel": "/software/repository/github/0xCoto/Virgo", - "avatar": "https://avatars.githubusercontent.com/u/25392776?v=4", - "description": "\ud83d\udce1 Virgo: A Versatile Spectrometer for Radio Astronomy", + "uid": "github/jjmccollum/teiphy", + "url": "https://github.com/jjmccollum/teiphy", + "rel": "/software/repository/github/jjmccollum/teiphy", + "avatar": "https://avatars.githubusercontent.com/u/15383366?v=4", + "description": "A Python package for converting TEI XML collations to NEXUS and other formats", "topics": [ - "sdr", - "virgo", - "radio-telescope", - "radio", - "telescope", - "astronomy", - "spectrometer", - "rf", - "rfi-mitigation", - "astrophysics", - "radio-astronomy" + "nexus", + "phylogenetics", + "python", + "tei-xml", + "text-encoding" ] }, { - "uid": "github/annajenul/UBayFS", - "url": "https://github.com/annajenul/UBayFS", - "rel": "/software/repository/github/annajenul/UBayFS", - "avatar": "https://avatars.githubusercontent.com/u/60505157?v=4", - "description": "UBayFS implements the UBayFS feature selection framework, together with an interactive Shiny dashbord.", + "uid": "github/ryansmcgee/seirsplus", + "url": "https://github.com/ryansmcgee/seirsplus", + "rel": "/software/repository/github/ryansmcgee/seirsplus", + "avatar": "https://avatars.githubusercontent.com/u/13767747?v=4", + "description": "Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.", "topics": [ - "feature-selection", - "r", - "ensemble-models", - "user-knowledge", - "bayesian-statistics" + "epidemiology", + "epidemiology-analysis", + "epidemic-model", + "epidemic-simulations", + "epidemics", + "covid-19", + "covid", + "sars-cov-2", + "coronavirus" ] }, { - "uid": "github/benedictpaten/marginPhase", - "url": "https://github.com/benedictpaten/marginPhase", - "rel": "/software/repository/github/benedictpaten/marginPhase", - "avatar": "https://avatars.githubusercontent.com/u/593440?v=4", - "description": "simultaneous haplotyping and genotyping", + "uid": "github/kdeck/TTVFast", + "url": "https://github.com/kdeck/TTVFast", + "rel": "/software/repository/github/kdeck/TTVFast", + "avatar": "https://avatars.githubusercontent.com/u/6886360?v=4", + "description": "TTVFast efficiently calculates transit times for n-planet systems and the corresponding radial velocities.", "topics": [] }, { - "uid": "github/SysBioUAB/hpi_predictor", - "url": "https://github.com/SysBioUAB/hpi_predictor", - "rel": "/software/repository/github/SysBioUAB/hpi_predictor", - "avatar": "https://avatars.githubusercontent.com/u/78474998?v=4", - "description": "Bash+R tool to predict host-pathogen protein-protein interactions based on numerical encoding of physicochemical descriptors", + "uid": "github/danielapai/bioverse", + "url": "https://github.com/danielapai/bioverse", + "rel": "/software/repository/github/danielapai/bioverse", + "avatar": "https://avatars.githubusercontent.com/u/16784174?v=4", + "description": "A simulation framework to assess the statistical power of future biosignature surveys", "topics": [] }, { - "uid": "github/Basvanstein/GSAreport", - "url": "https://github.com/Basvanstein/GSAreport", - "rel": "/software/repository/github/Basvanstein/GSAreport", - "avatar": "https://avatars.githubusercontent.com/u/3687311?v=4", - "description": "Global Sensitivity reporting for Explainable AI", - "topics": [ - "explainable-ai", - "machine-learning", - "python", - "sensitivity-analysis" - ] - }, - { - "uid": "github/yuguangchen1/KcwiKit", - "url": "https://github.com/yuguangchen1/KcwiKit", - "rel": "/software/repository/github/yuguangchen1/KcwiKit", - "avatar": "https://avatars.githubusercontent.com/u/26374962?v=4", - "description": "Improving KCWI/KDERP pipeline.", + "uid": "github/astrostat/Automark", + "url": "https://github.com/astrostat/Automark", + "rel": "/software/repository/github/astrostat/Automark", + "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", + "description": "Automatic marking of marked Poisson process in astronomical high-dimensional datasets", "topics": [] }, { - "uid": "github/cschreib/egg", - "url": "https://github.com/cschreib/egg", - "rel": "/software/repository/github/cschreib/egg", - "avatar": "https://avatars.githubusercontent.com/u/2236577?v=4", - "description": "Tool to generate fake galaxy catalogs with realistic positions, morphologies and fluxes from the far-ultraviolet to the far-infrared.", - "topics": [ - "tool", - "astronomy", - "astrophysics", - "catalog", - "mock" - ] + "uid": "github/astrostat/LIRA", + "url": "https://github.com/astrostat/LIRA", + "rel": "/software/repository/github/astrostat/LIRA", + "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", + "description": "Low-counts Image Reconstruction and Analysis", + "topics": [] }, { - "uid": "github/ofionnad/radiowinds", - "url": "https://github.com/ofionnad/radiowinds", - "rel": "/software/repository/github/ofionnad/radiowinds", - "avatar": "https://avatars.githubusercontent.com/u/20027636?v=4", - "description": "Calculate the thermal bremsstrahlung emission from stellar winds", + "uid": "github/astrostat/BASCS", + "url": "https://github.com/astrostat/BASCS", + "rel": "/software/repository/github/astrostat/BASCS", + "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", + "description": "Bayesian Separation of Close Sources", "topics": [] }, { - "uid": "github/phpuech/OT_Analysis", - "url": "https://github.com/phpuech/OT_Analysis", - "rel": "/software/repository/github/phpuech/OT_Analysis", - "avatar": "https://avatars.githubusercontent.com/u/7237734?v=4", - "description": "Software for optical data force analysis / JPK Nanowizard", + "uid": "github/astrostat/TD-CARMA", + "url": "https://github.com/astrostat/TD-CARMA", + "rel": "/software/repository/github/astrostat/TD-CARMA", + "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", + "description": null, "topics": [] }, { - "uid": "github/maize-genetics/rTASSEL", - "url": "https://github.com/maize-genetics/rTASSEL", - "rel": "/software/repository/github/maize-genetics/rTASSEL", - "avatar": "https://avatars.githubusercontent.com/u/53280986?v=4", - "description": "R front-end for TASSEL", - "topics": [] + "uid": "github/vgteam/vg", + "url": "https://github.com/vgteam/vg", + "rel": "/software/repository/github/vgteam/vg", + "avatar": "https://avatars.githubusercontent.com/u/15925452?v=4", + "description": "tools for working with genome variation graphs", + "topics": [ + "variation-graph", + "graph", + "genome-graph", + "genomics", + "dna" + ] }, { - "uid": "github/andr1976/HydDown", - "url": "https://github.com/andr1976/HydDown", - "rel": "/software/repository/github/andr1976/HydDown", - "avatar": "https://avatars.githubusercontent.com/u/58475535?v=4", - "description": "Hydrogen (or other pure gas phase species) depressurization calculations", + "uid": "github/vgteam/vg#vg", + "url": "https://github.com/vgteam/vg", + "rel": "/software/repository/github/vgteam/vg#vg", + "avatar": "https://avatars.githubusercontent.com/u/15925452?v=4", + "description": "tools for working with genome variation graphs", "topics": [ - "heat-transfer", - "coolprop", - "pressure", - "gas-phase", - "relief-valve", - "blow-down", - "depressurisation", - "python", - "thermodynamics" + "variation-graph", + "graph", + "genome-graph", + "genomics", + "dna" ] }, { - "uid": "github/Valar-hub/MMLPhoto-z", - "url": "https://github.com/Valar-hub/MMLPhoto-z", - "rel": "/software/repository/github/Valar-hub/MMLPhoto-z", - "avatar": "https://avatars.githubusercontent.com/u/57578516?v=4", + "uid": "github/bwengals/CCSNMultivar", + "url": "https://github.com/bwengals/ccsnmultivar", + "rel": "/software/repository/github/bwengals/CCSNMultivar", + "avatar": "https://avatars.githubusercontent.com/u/6325473?v=4", "description": null, "topics": [] }, { - "uid": "github/lucianolorenti/ceruleo", - "url": "https://github.com/lucianolorenti/ceruleo", - "rel": "/software/repository/github/lucianolorenti/ceruleo", - "avatar": "https://avatars.githubusercontent.com/u/106397?v=4", - "description": "CeRULEo: Comprehensive utilitiEs for Remaining Useful Life Estimation methOds", - "topics": [ - "predictive-maintenance", - "time-series", - "remaining-useful-life", - "remaining-useful-life-prediction" - ] - }, - { - "uid": "github/YihanWangAstro/SpaceHub", - "url": "https://github.com/YihanWangAstro/SpaceHub", - "rel": "/software/repository/github/YihanWangAstro/SpaceHub", - "avatar": "https://avatars.githubusercontent.com/u/26609492?v=4", - "description": "SpaceHub", + "uid": "github/HARMONI-ELT/HSIM", + "url": "https://github.com/HARMONI-ELT/HSIM", + "rel": "/software/repository/github/HARMONI-ELT/HSIM", + "avatar": "https://avatars.githubusercontent.com/u/45947677?v=4", + "description": "HSIM: HARMONI simulation pipeline", "topics": [] }, { - "uid": "github/winger/hawking_net", - "url": "https://github.com/winger/hawking_net", - "rel": "/software/repository/github/winger/hawking_net", - "avatar": "https://avatars.githubusercontent.com/u/734585?v=4", - "description": null, + "uid": "github/nickelnine37/pykronecker", + "url": "https://github.com/nickelnine37/pykronecker", + "rel": "/software/repository/github/nickelnine37/pykronecker", + "avatar": "https://avatars.githubusercontent.com/u/21191597?v=4", + "description": "A python library for creating Kronecker Product operators with efficient lazy computation", "topics": [] }, { - "uid": "github/mnets/pymnet", - "url": "https://github.com/mnets/pymnet", - "rel": "/software/repository/github/mnets/pymnet", - "avatar": "https://avatars.githubusercontent.com/u/167196783?v=4", - "description": "The original library for analyzing multilayer networks.", + "uid": "github/parafields/parafields", + "url": "https://github.com/parafields/parafields", + "rel": "/software/repository/github/parafields/parafields", + "avatar": "https://avatars.githubusercontent.com/u/110537507?v=4", + "description": "Parallel Parameter Field Generator for Python", "topics": [ - "network-analysis", - "python", - "multilayer-networks" + "hacktoberfest", + "iwr-hacktoberfest" ] }, { - "uid": "github/jpober/21cmSense", - "url": "https://github.com/jpober/21cmSense", - "rel": "/software/repository/github/jpober/21cmSense", - "avatar": "https://avatars.githubusercontent.com/u/1482671?v=4", - "description": "Code for calculating the sensitivity of 21cm experiments to the EoR power spectrum", + "uid": "github/luinix/pesco", + "url": "https://github.com/luinix/pesco", + "rel": "/software/repository/github/luinix/pesco", + "avatar": "https://avatars.githubusercontent.com/u/832161?v=4", + "description": "Cognitive stimulation tool for elderly or cognitively impaired", "topics": [] }, { - "uid": "github/rpoleski/MulensModel", - "url": "https://github.com/rpoleski/MulensModel", - "rel": "/software/repository/github/rpoleski/MulensModel", - "avatar": "https://avatars.githubusercontent.com/u/19961701?v=4", - "description": "Microlensing Modelling package", + "uid": "github/bradkav/EarthScatterLikelihood", + "url": "https://github.com/bradkav/EarthScatterLikelihood", + "rel": "/software/repository/github/bradkav/EarthScatterLikelihood", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Code for calculating event rates and likelihoods for Dark Matter direct detection experiments in the presence of Earth-Scattering", "topics": [] }, { - "uid": "github/PSims/BayesEoR", - "url": "https://github.com/PSims/BayesEoR", - "rel": "/software/repository/github/PSims/BayesEoR", - "avatar": "https://avatars.githubusercontent.com/u/6097708?v=4", - "description": "Code to estimate the power spectrum of redshifted 21-cm emission from interferometric observations, within a Bayesian forward modelling framework.", + "uid": "github/bradkav/DMRadon", + "url": "https://github.com/bradkav/DMRadon", + "rel": "/software/repository/github/bradkav/DMRadon", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Tools for calculating the Radon Transform, for use in the analysis of Directional Dark Matter Direct Detection", "topics": [] }, { - "uid": "github/JuliaOcean/AIBECS.jl", - "url": "https://github.com/JuliaOcean/AIBECS.jl", - "rel": "/software/repository/github/JuliaOcean/AIBECS.jl", - "avatar": "https://avatars.githubusercontent.com/u/41747359?v=4", - "description": "The ideal tool for exploring global marine biogeochemical cycles.", + "uid": "github/bradkav/AntiparticleDM", + "url": "https://github.com/bradkav/AntiparticleDM", + "rel": "/software/repository/github/bradkav/AntiparticleDM", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Prospects for discriminating between Majorana and Dirac Dark Matter using future direct detection data. ", "topics": [ - "ocean", - "oceanography", - "ocean-circulation", - "modeling", - "model", - "models", - "global", - "optimization", - "inverse-model", - "marine", - "marine-tracer", - "tracer", - "transport", - "julia", - "awesome", - "biogeochemistry", - "biogeochemical", - "biogeochemical-model", - "pathways", - "fluxes" + "dark-matter", + "physics", + "particle-physics" ] }, { - "uid": "github/JuliaOcean/PlanktonIndividuals.jl", - "url": "https://github.com/JuliaOcean/PlanktonIndividuals.jl", - "rel": "/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", - "avatar": "https://avatars.githubusercontent.com/u/41747359?v=4", - "description": "This package simulates the behaviors of an ensemble of phytoplankton individuals.", + "uid": "github/bradkav/EarthShadow", + "url": "https://github.com/bradkav/EarthShadow", + "rel": "/software/repository/github/bradkav/EarthShadow", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "A tool for calculating the impact of Earth-scattering on the distribution of Dark Matter (DM) particles. Includes (Mathematica) code, numerical results, plots and animations.", "topics": [] }, { - "uid": "github/marseille-proteomique/DIAgui", - "url": "https://github.com/marseille-proteomique/DIAgui", - "rel": "/software/repository/github/marseille-proteomique/DIAgui", - "avatar": "https://avatars.githubusercontent.com/u/58274920?v=4", - "description": "An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)", + "uid": "github/bradkav/WIMpy_NREFT", + "url": "https://github.com/bradkav/WIMpy_NREFT", + "rel": "/software/repository/github/bradkav/WIMpy_NREFT", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "WIMpy_NREFT is a code for calculating Dark Matter direct detection rates in the framework of non-relativistic effective field theory (NREFT).", "topics": [] }, { - "uid": "github/whybsml/whybsml", - "url": "https://github.com/whybsml/whybsml", - "rel": "/software/repository/github/whybsml/whybsml", - "avatar": "https://avatars.githubusercontent.com/u/138935718?v=4", - "description": null, + "uid": "github/bradkav/runDM", + "url": "https://github.com/bradkav/runDM", + "rel": "/software/repository/github/bradkav/runDM", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "A tool (in Mathematica and Python) for calculating the running of the couplings of Dark Matter (DM) to the Standard Model (SM) in simplified models with vector mediators.", "topics": [] }, { - "uid": "github/JuliaHCI/ADI.jl", - "url": "https://github.com/JuliaHCI/ADI.jl", - "rel": "/software/repository/github/JuliaHCI/ADI.jl", - "avatar": "https://avatars1.githubusercontent.com/u/62594833?v=4", - "description": "Algorithms for performing angular differential imaging (ADI)", + "uid": "github/bradkav/CEvNS", + "url": "https://github.com/bradkav/CEvNS", + "rel": "/software/repository/github/bradkav/CEvNS", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Code for calculating Coherent Elastic Neutrino-Nucleus Scattering (CEvNS) cross sections and recoil spectra. Also includes code for obtaining New Physics constraints from the COHERENT-2017 results.", "topics": [ - "astronomy", - "hci", - "imaging", - "reduction", - "adi" + "cross-sections", + "neutrinos", + "physics" ] }, { - "uid": "github/NuSpaceSim/nupyprop", - "url": "https://github.com/NuSpaceSim/nupyprop", - "rel": "/software/repository/github/NuSpaceSim/nupyprop", - "avatar": "https://avatars.githubusercontent.com/u/47796399?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/athob/py-ananke", - "url": "https://github.com/athob/py-ananke", - "rel": "/software/repository/github/athob/py-ananke", - "avatar": "https://avatars.githubusercontent.com/u/45973167?v=4", - "description": "Python pipeline to generate mock astrometric and photometric catalogs of synthetic stars derived from particle-based simulated star populations", + "uid": "github/bradkav/BlackHolesDarkDress", + "url": "https://github.com/bradkav/BlackHolesDarkDress", + "rel": "/software/repository/github/bradkav/BlackHolesDarkDress", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Code for studying primordial black hole (PBH) binaries, clothed in dark matter (DM) halos, associated with the paper \"Black Holes' Dark Dress: On the merger rate of a subdominant population of primordial black holes\".", "topics": [] }, { - "uid": "github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", - "url": "https://github.com/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", - "rel": "/software/repository/github/dfki-ric-underactuated-lab/torque_limited_simple_pendulum", - "avatar": "https://avatars.githubusercontent.com/u/85358696?v=4", - "description": "Torque Limited Simple Pendulum Underactuated System", + "uid": "github/bradkav/verne", + "url": "https://github.com/bradkav/verne", + "rel": "/software/repository/github/bradkav/verne", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "Python code for calculating the Earth-stopping effect for super-heavy Dark Matter (DM).", "topics": [] }, { - "uid": "github/m-a-d-n-e-s-s/madness", - "url": "https://github.com/m-a-d-n-e-s-s/madness", - "rel": "/software/repository/github/m-a-d-n-e-s-s/madness", - "avatar": "https://avatars.githubusercontent.com/u/7550723?v=4", - "description": "Multiresolution Adaptive Numerical Environment for Scientific Simulation", + "uid": "github/bradkav/NbodyIMRI", + "url": "https://github.com/bradkav/NbodyIMRI", + "rel": "/software/repository/github/bradkav/NbodyIMRI", + "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", + "description": "N-body solver in python, tailored to intermediate-mass ratio inspirals of black holes and dark matter spikes", "topics": [] }, { - "uid": "github/MaayanLab/signature-commons-ui", - "url": "https://github.com/MaayanLab/signature-commons-ui", - "rel": "/software/repository/github/MaayanLab/signature-commons-ui", - "avatar": "https://avatars.githubusercontent.com/u/5282243?v=4", - "description": "A front-end UI for demoing API integration", + "uid": "github/nlesc-nano/Moka", + "url": "https://github.com/nlesc-nano/Moka", + "rel": "/software/repository/github/nlesc-nano/Moka", + "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", + "description": "command line interface to compute and molecular properties from a database", "topics": [] }, { - "uid": "github/PyPO-dev/PyPO", - "url": "https://github.com/PyPO-dev/PyPO", - "rel": "/software/repository/github/PyPO-dev/PyPO", - "avatar": "https://avatars.githubusercontent.com/u/133362839?v=4", - "description": "\ud83d\udce1 Open-source physical optics simulation package.", + "uid": "github/nlesc-nano/insilico-server", + "url": "https://github.com/nlesc-nano/insilico-server", + "rel": "/software/repository/github/nlesc-nano/insilico-server", + "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", + "description": "web server to handle the properties", "topics": [] }, { - "uid": "github/Jesper-Karsten/MBASC", - "url": "https://github.com/Jesper-Karsten/MBASC", - "rel": "/software/repository/github/Jesper-Karsten/MBASC", - "avatar": "https://avatars.githubusercontent.com/u/132052164?v=4", - "description": null, - "topics": [] + "uid": "github/nlesc-nano/flamingo", + "url": "https://github.com/nlesc-nano/flamingo", + "rel": "/software/repository/github/nlesc-nano/flamingo", + "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", + "description": "Computation and filtering of molecular properties", + "topics": [ + "quantum-chemistry", + "nanomaterials", + "insilico", + "molecular-simulation" + ] }, { - "uid": "github/UM-PEPL/HallThruster.jl", - "url": "https://github.com/UM-PEPL/HallThruster.jl", - "rel": "/software/repository/github/UM-PEPL/HallThruster.jl", - "avatar": "https://avatars.githubusercontent.com/u/102543730?v=4", - "description": "An open-source fluid Hall thruster code", - "topics": [] + "uid": "github/nlesc-nano/CAT", + "url": "https://github.com/nlesc-nano/CAT", + "rel": "/software/repository/github/nlesc-nano/CAT", + "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", + "description": "A collection of tools designed for the automatic construction, and subsequent analysis, of chemical compounds.", + "topics": [ + "quantum-mechanics", + "science", + "chemistry", + "automation", + "scientific-workflows", + "python-3-7", + "molecular-mechanics", + "python-3-6", + "python-3-8" + ] }, { - "uid": "github/MRChemSoft/mrchem", - "url": "https://github.com/MRChemSoft/mrchem", - "rel": "/software/repository/github/MRChemSoft/mrchem", - "avatar": "https://avatars.githubusercontent.com/u/16899707?v=4", - "description": "MultiResolution Chemistry", + "uid": "github/nlesc-nano/ceiba-cli", + "url": "https://github.com/nlesc-nano/ceiba-cli", + "rel": "/software/repository/github/nlesc-nano/ceiba-cli", + "avatar": "https://avatars.githubusercontent.com/u/49066803?v=4", + "description": "command-line interface to compute and molecular properties from a database", "topics": [ - "multiwavelets", - "computational-chemistry", - "chemistry", - "physics", - "c-plus-plus", - "python", - "density-functional-theory" + "command-line", + "web-service", + "client" ] }, { - "uid": "github/pandas-dev/pandas", - "url": "https://github.com/pandas-dev/pandas", - "rel": "/software/repository/github/pandas-dev/pandas", - "avatar": "https://avatars2.githubusercontent.com/u/21206976?v=4", - "description": "Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more", + "uid": "github/nlesc-nano/swan", + "url": "https://github.com/nlesc-nano/swan", + "rel": "/software/repository/github/nlesc-nano/swan", + "avatar": "https://avatars0.githubusercontent.com/u/49066803?v=4", + "description": "Screening Workflows And statistical models to predict new materials", "topics": [ - "data-analysis", - "pandas", - "flexible", - "alignment", + "material-science", + "quantum-chemistry", + "machine-learning", "python" ] }, { - "uid": "github/BenNordick/HiLoop", - "url": "https://github.com/BenNordick/HiLoop", - "rel": "/software/repository/github/BenNordick/HiLoop", - "avatar": "https://avatars.githubusercontent.com/u/38300205?v=4", - "description": null, + "uid": "github/nlesc-nano/ceiba", + "url": "https://github.com/nlesc-nano/ceiba", + "rel": "/software/repository/github/nlesc-nano/ceiba", + "avatar": "https://avatars.githubusercontent.com/u/49066803?v=4", + "description": "Web service to manage scientific simulation data", "topics": [ - "network-analysis", - "bioinformatics", - "enrichment-analysis" + "scientific-computing", + "web-service", + "python", + "graphql", + "workflow-automation" ] }, { - "uid": "github/assume-framework/assume", - "url": "https://github.com/assume-framework/assume", - "rel": "/software/repository/github/assume-framework/assume", - "avatar": "https://avatars.githubusercontent.com/u/131251735?v=4", - "description": "ASSUME - Agent-based Simulation for Studying and Understanding Market Evolution", + "uid": "github/maxbernyk/lightcone", + "url": "https://github.com/maxbernyk/lightcone", + "rel": "/software/repository/github/maxbernyk/lightcone", + "avatar": "https://avatars.githubusercontent.com/u/4667838?v=4", + "description": "light-cone generating script", "topics": [] }, { - "uid": "github/pirl-unc/ace", - "url": "https://github.com/pirl-unc/ace", - "rel": "/software/repository/github/pirl-unc/ace", - "avatar": "https://avatars.githubusercontent.com/u/71463575?v=4", - "description": null, + "uid": "github/xiaofengsong/pHisPred", + "url": "https://github.com/xiaofengsong/pHisPred", + "rel": "/software/repository/github/xiaofengsong/pHisPred", + "avatar": "https://avatars.githubusercontent.com/u/13796294?v=4", + "description": "A bioinformatic tool for identifying protein histidine phosphorylation sites", "topics": [] }, { - "uid": "github/soerendip/ms-mint", - "url": "https://github.com/soerendip/ms-mint", - "rel": "/software/repository/github/soerendip/ms-mint", - "avatar": "https://avatars.githubusercontent.com/u/3391614?v=4", - "description": "Interactive application for large-scale metabolomics (MS1). ", + "uid": "github/tardis-sn/carsus", + "url": "https://github.com/tardis-sn/carsus", + "rel": "/software/repository/github/tardis-sn/carsus", + "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", + "description": "Atomic Database for Astronomy", "topics": [ - "mass-spectrometry", - "metabolomics", "python", - "mint", - "extracts-data", - "visualization", - "interactive" + "astronomy", + "atomic-database" ] }, { - "uid": "github/meta-logic/sequoia", - "url": "https://github.com/meta-logic/sequoia", - "rel": "/software/repository/github/meta-logic/sequoia", - "avatar": "https://avatars.githubusercontent.com/u/11968006?v=4", - "description": "Design, play with, and analyze sequent calculus proof systems.", + "uid": "github/tardis-sn/stardis", + "url": "https://github.com/tardis-sn/stardis", + "rel": "/software/repository/github/tardis-sn/stardis", + "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", + "description": "TARDIS stellar radiative transfer", "topics": [] }, { - "uid": "github/chemprop/chemprop_benchmark", - "url": "https://github.com/chemprop/chemprop_benchmark", - "rel": "/software/repository/github/chemprop/chemprop_benchmark", - "avatar": "https://avatars.githubusercontent.com/u/60978260?v=4", - "description": " Chemprop benchmarking scripts and data", + "uid": "github/tardis-sn/tardis", + "url": "https://github.com/tardis-sn/tardis", + "rel": "/software/repository/github/tardis-sn/tardis", + "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", + "description": "TARDIS - Temperature And Radiative Diffusion In Supernovae", + "topics": [ + "science", + "astrophysics", + "python", + "supernova", + "radiative-transfer" + ] + }, + { + "uid": "github/medbioinf/macpepdb-frontend", + "url": "https://github.com/medbioinf/macpepdb-frontend", + "rel": "/software/repository/github/medbioinf/macpepdb-frontend", + "avatar": "https://avatars.githubusercontent.com/u/139237371?v=4", + "description": "WASM frontend to keep up with MaCPepDB", "topics": [] }, { - "uid": "github/chrisfinlay/tabascal", - "url": "https://github.com/chrisfinlay/tabascal", - "rel": "/software/repository/github/chrisfinlay/tabascal", - "avatar": "https://avatars.githubusercontent.com/u/18262727?v=4", - "description": "TrAjectory BAsed RFI Subtraction and CALibration (TABASCAL) of radio interferometry data. A source to visibility model for astronomical and RFI sources including near-field effects. Visibility data is jointly calibrated with excision of specific RFI contamination.", + "uid": "github/medbioinf/pia", + "url": "https://github.com/medbioinf/pia", + "rel": "/software/repository/github/medbioinf/pia", + "avatar": "https://avatars.githubusercontent.com/u/139237371?v=4", + "description": ":books: :microscope: PIA - Protein Inference Algorithms", "topics": [ - "radio-astronomy", - "radio-frequency-interference", - "radio-interferometry", - "lofar", - "meerkat", - "rfi-mitigation", - "rfi-removal", - "satellite", - "ska-telescope", - "gpu" + "proteomics", + "protein-inference", + "protein", + "spectrum-identification", + "search-engine", + "inference" ] }, { - "uid": "github/esoPanda/FTbg", - "url": "https://github.com/esoPanda/FTbg", - "rel": "/software/repository/github/esoPanda/FTbg", - "avatar": "https://avatars.githubusercontent.com/u/10759043?v=4", - "description": "Background removal using Fourier Transform", + "uid": "github/desmid/mview", + "url": "https://github.com/desmid/mview", + "rel": "/software/repository/github/desmid/mview", + "avatar": "https://avatars.githubusercontent.com/u/12565129?v=4", + "description": "MView extracts and reformats the results of a sequence database search or multiple alignment.", + "topics": [ + "bioinformatics", + "bioinformatics-tool", + "sequence-alignment-visualization", + "blast-search", + "blast", + "fasta", + "clustal" + ] + }, + { + "uid": "github/aL3x-O-o-Hung/CAT-Net", + "url": "https://github.com/aL3x-O-o-Hung/CAT-Net", + "rel": "/software/repository/github/aL3x-O-o-Hung/CAT-Net", + "avatar": "https://avatars.githubusercontent.com/u/39303016?v=4", + "description": null, "topics": [] }, { - "uid": "github/champsproject/ldds", - "url": "https://github.com/champsproject/ldds", - "rel": "/software/repository/github/champsproject/ldds", - "avatar": "https://avatars.githubusercontent.com/u/58516742?v=4", - "description": "Python package for computing and visualizing Lagrangian Descriptors in Dynamical Systems", + "uid": "github/robin-janssen/CODES-Benchmark", + "url": "https://github.com/robin-janssen/CODES-Benchmark", + "rel": "/software/repository/github/robin-janssen/CODES-Benchmark", + "avatar": "https://avatars.githubusercontent.com/u/82322346?v=4", + "description": "Benchmarking Surrogates for coupled ODE systems.", "topics": [ - "dynamical-systems", - "lagrangian-descriptors", - "python" + "chemical-reaction-networks", + "deeponet", + "neuralode", + "ode", + "operator-learning", + "surrogate-models" ] }, { - "uid": "github/varchasgopalaswamy/AutoUncertainties", - "url": "https://github.com/varchasgopalaswamy/AutoUncertainties", - "rel": "/software/repository/github/varchasgopalaswamy/AutoUncertainties", - "avatar": "https://avatars.githubusercontent.com/u/2359219?v=4", - "description": "Drop-in Uncertainty Propagation with Automatic Differentiation", + "uid": "github/rhdtownsend/gyre", + "url": "https://github.com/rhdtownsend/gyre", + "rel": "/software/repository/github/rhdtownsend/gyre", + "avatar": "https://avatars.githubusercontent.com/u/13732464?v=4", + "description": "The GYRE Stellar Oscillation Code", "topics": [] }, { - "uid": "github/rice-solar-physics/HYDRAD", - "url": "https://github.com/rice-solar-physics/HYDRAD", - "rel": "/software/repository/github/rice-solar-physics/HYDRAD", - "avatar": "https://avatars.githubusercontent.com/u/8676158?v=4", - "description": "HYDrodynamics and RADiation Code for computing solutions to field-aligned hydrodynamic equations in coronal loops", - "topics": [] + "uid": "github/snek5000/snek5000", + "url": "https://github.com/snek5000/snek5000", + "rel": "/software/repository/github/snek5000/snek5000", + "avatar": "https://avatars.githubusercontent.com/u/99480879?v=4", + "description": ":snake: Python framework for Nek5000 :rocket:", + "topics": [ + "python", + "nek5000", + "snek5000", + "fluidsim", + "snakemake", + "jinja2", + "fluiddyn", + "cfd", + "simulation", + "closember", + "workflow" + ] }, { - "uid": "github/rice-solar-physics/EBTEL", - "url": "https://github.com/rice-solar-physics/EBTEL", - "rel": "/software/repository/github/rice-solar-physics/EBTEL", - "avatar": "https://avatars.githubusercontent.com/u/8676158?v=4", - "description": "Enthalpy-Based Thermal Evolution of Loops (EBTEL) model coded in the IDL language by J. A. Klimchuk, S. Patsourakos, and P.J. Cargill ", + "uid": "github/ijuric/MAPS", + "url": "https://github.com/ijuric/MAPS", + "rel": "/software/repository/github/ijuric/MAPS", + "avatar": "https://avatars.githubusercontent.com/u/11790693?v=4", + "description": "MAPS (Model-based Analysis of PLAC-Seq data) pipeline is a a set of multiple scripts used to analyze PLAC-Seq and HiChIP data.", "topics": [] }, { - "uid": "github/samtools/bcftools", - "url": "https://github.com/samtools/bcftools", - "rel": "/software/repository/github/samtools/bcftools", - "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", - "description": "This is the official development repository for BCFtools. See installation instructions and other documentation here http://samtools.github.io/bcftools/howtos/install.html", + "uid": "github/gaelforget/MITgcm.jl", + "url": "https://github.com/gaelforget/MITgcm.jl", + "rel": "/software/repository/github/gaelforget/MITgcm.jl", + "avatar": "https://avatars.githubusercontent.com/u/20276764?v=4", + "description": "Julia interface to MITgcm", + "topics": [ + "adjoint", + "adjoint-sensitivities", + "biogeochemistry", + "climate", + "climate-model", + "climate-science", + "ecology", + "model", + "ocean", + "ocean-modelling", + "ocean-sciences", + "particles", + "seaice", + "tracers", + "transport" + ] + }, + { + "uid": "github/astrom-tom/dfitspy", + "url": "https://github.com/astrom-tom/dfitspy", + "rel": "/software/repository/github/astrom-tom/dfitspy", + "avatar": "https://avatars.githubusercontent.com/u/26314073?v=4", + "description": null, "topics": [] }, { - "uid": "github/samtools/htslib", - "url": "https://github.com/samtools/htslib", - "rel": "/software/repository/github/samtools/htslib", - "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", - "description": "C library for high-throughput sequencing data formats", + "uid": "github/astrom-tom/specstack", + "url": "https://github.com/astrom-tom/specstack", + "rel": "/software/repository/github/astrom-tom/specstack", + "avatar": "https://avatars.githubusercontent.com/u/26314073?v=4", + "description": "Simple spectral stacking from command line interface", + "topics": [] + }, + { + "uid": "github/numpy/numpy", + "url": "https://github.com/numpy/numpy", + "rel": "/software/repository/github/numpy/numpy", + "avatar": "https://avatars2.githubusercontent.com/u/288276?v=4", + "description": "The fundamental package for scientific computing with Python.", "topics": [ - "htslib", - "bioinformatics", - "sam", - "bam", - "cram", - "vcf", - "bcf", - "ngs" + "numpy", + "python" ] }, { - "uid": "github/samtools/samtools", - "url": "https://github.com/samtools/samtools", - "rel": "/software/repository/github/samtools/samtools", - "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", - "description": "Tools (written in C using htslib) for manipulating next-generation sequencing data", + "uid": "github/SegataLab/lefse", + "url": "https://github.com/SegataLab/lefse", + "rel": "/software/repository/github/SegataLab/lefse", + "avatar": "https://avatars.githubusercontent.com/u/60979954?v=4", + "description": "determine features of organisms, clades, taxonomic units, genes", "topics": [] }, { - "uid": "github/samtools/htsjdk", - "url": "https://github.com/samtools/htsjdk", - "rel": "/software/repository/github/samtools/htsjdk", - "avatar": "https://avatars.githubusercontent.com/u/1518450?v=4", - "description": "A Java API for high-throughput sequencing data (HTS) formats.", + "uid": "github/s4hts/HTStream", + "url": "https://github.com/s4hts/HTStream", + "rel": "/software/repository/github/s4hts/HTStream", + "avatar": "https://avatars.githubusercontent.com/u/64926039?v=4", + "description": "A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes", "topics": [ + "bioinformatics", + "bioinformatics-tool", "genomics", - "sequencing", - "dna", - "ngs", - "bam", - "cram", - "sam", - "fasta", - "vcf", - "java-api", - "java" + "streaming", + "linux-pipes", + "sequence-analysis", + "next-generation-sequencing" ] }, { - "uid": "github/lahovniktadej/gatree", - "url": "https://github.com/lahovniktadej/gatree", - "rel": "/software/repository/github/lahovniktadej/gatree", - "avatar": "https://avatars.githubusercontent.com/u/57890734?v=4", - "description": "Evolutionary decision tree classifier", + "uid": "github/hallamlab/TreeSAPP", + "url": "https://github.com/hallamlab/TreeSAPP", + "rel": "/software/repository/github/hallamlab/TreeSAPP", + "avatar": "https://avatars.githubusercontent.com/u/2644334?v=4", + "description": "A Python package for gene-centric taxonomic and functional classification using phylogenetic placement", "topics": [ - "decision-tree", - "machine-learning", - "evolutionary-algorithm", - "genetic-algorithm" + "bioinformatics", + "phylogenetics", + "microbial-genomics" ] }, { - "uid": "github/timahutchinson/redmonster", - "url": "https://github.com/timahutchinson/redmonster", - "rel": "/software/repository/github/timahutchinson/redmonster", - "avatar": "https://avatars.githubusercontent.com/u/15254667?v=4", - "description": "A project to develop a sophisticated and flexible set of Python utilities for redshift measurement, physical parameter measurement, and classification of one-dimensional astronomical spectra.", - "topics": [] + "uid": "github/MouseLand/cellpose", + "url": "https://github.com/MouseLand/cellpose", + "rel": "/software/repository/github/MouseLand/cellpose", + "avatar": "https://avatars.githubusercontent.com/u/28845184?v=4", + "description": "a generalist algorithm for cellular segmentation with human-in-the-loop capabilities", + "topics": [ + "segmentation", + "cell-segmentation", + "cell-biology" + ] }, { - "uid": "github/mifumagalli/cluster-cloc", - "url": "https://github.com/mifumagalli/cluster-cloc", - "rel": "/software/repository/github/mifumagalli/cluster-cloc", - "avatar": "https://avatars.githubusercontent.com/u/12461695?v=4", - "description": "Automatically exported from code.google.com/p/cluster-cloc", + "uid": "github/ismaelpessa/PyMUSE", + "url": "https://github.com/ismaelpessa/PyMUSE", + "rel": "/software/repository/github/ismaelpessa/PyMUSE", + "avatar": "https://avatars.githubusercontent.com/u/18149707?v=4", + "description": null, "topics": [] }, { - "uid": "github/OSSOS/SurveySimulator", - "url": "https://github.com/OSSOS/SurveySimulator", - "rel": "/software/repository/github/OSSOS/SurveySimulator", - "avatar": "https://avatars.githubusercontent.com/u/7736642?v=4", - "description": "Simulate detecting TNOs, nearly as fun as really detecting TNOs.", + "uid": "github/bwoshea/ZEUS-MP_2", + "url": "https://github.com/bwoshea/ZEUS-MP_2", + "rel": "/software/repository/github/bwoshea/ZEUS-MP_2", + "avatar": "https://avatars.githubusercontent.com/u/7969676?v=4", + "description": "This repository is the home of the ZEUS-MP 2.0 code, which was created by John Hayes and others at the Laboratory for Computational Astrophysics at UIUC and UCSD.", "topics": [] }, { - "uid": "github/benopp99/DPMhalo", - "url": "https://github.com/benopp99/DPMhalo", - "rel": "/software/repository/github/benopp99/DPMhalo", - "avatar": "https://avatars.githubusercontent.com/u/50880489?v=4", - "description": "The Descriptive Parametric Model", + "uid": "github/DOnghiaGroup/MGwave", + "url": "https://github.com/DOnghiaGroup/MGwave", + "rel": "/software/repository/github/DOnghiaGroup/MGwave", + "avatar": "https://avatars.githubusercontent.com/u/27309362?v=4", + "description": "Wavelet transformation code to enable detection of kinematic moving groups in astronomical data.", "topics": [] }, { - "uid": "github/beckermr/calclens", - "url": "https://github.com/beckermr/calclens", - "rel": "/software/repository/github/beckermr/calclens", - "avatar": "https://avatars.githubusercontent.com/u/5296416?v=4", - "description": "Curved-sky grAvitational Lensing for Cosmological Light conE simulatioNS", - "topics": [] + "uid": "github/theLongLab/CATE", + "url": "https://github.com/theLongLab/CATE", + "rel": "/software/repository/github/theLongLab/CATE", + "avatar": "https://avatars.githubusercontent.com/u/37426791?v=4", + "description": "A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.", + "topics": [ + "1000genomes", + "cuda", + "cuda-programming", + "evolutionary-algorithms", + "evolutionary-biology", + "evolutionary-computation", + "genetic-algorithm", + "genetics", + "neutrality-test", + "vcf", + "vcf-data", + "vcf-files", + "cuda-toolkit", + "ehh", + "extended-haplotype-homozygosity", + "mk-test", + "neutrality", + "tajima" + ] }, { - "uid": "github/varlociraptor/varlociraptorhub.io", - "url": null, - "rel": "/software/repository/github/varlociraptor/varlociraptorhub.io", - "avatar": "", - "description": "flexible, arbitrary-scenario, uncertainty-aware variant calling with parameter free filtration via FDR control.", - "topics": [] + "uid": "github/devitocodes/devito", + "url": "https://github.com/devitocodes/devito", + "rel": "/software/repository/github/devitocodes/devito", + "avatar": "https://avatars1.githubusercontent.com/u/10018551?v=4", + "description": "Code generation framework for automated finite difference computation", + "topics": [ + "compilers", + "stencil-codes", + "finite-difference", + "sympy", + "jit", + "performance", + "fwi", + "rtm" + ] }, { - "uid": "github/jamescasbon/PyVCF", - "url": "https://github.com/jamescasbon/PyVCF", - "rel": "/software/repository/github/jamescasbon/PyVCF", - "avatar": "https://avatars.githubusercontent.com/u/97495?v=4", - "description": "A Variant Call Format reader for Python.", + "uid": "github/devitocodes/pyrevolve", + "url": "https://github.com/devitocodes/pyrevolve", + "rel": "/software/repository/github/devitocodes/pyrevolve", + "avatar": "https://avatars.githubusercontent.com/u/10018551?v=4", + "description": "Python library to manage checkpointing for adjoints", "topics": [] }, { - "uid": "github/zoometh/iconr", - "url": "https://github.com/zoometh/iconr", - "rel": "/software/repository/github/zoometh/iconr", - "avatar": "https://avatars.githubusercontent.com/u/67924910?v=4", - "description": "Formal methods to study Prehistory iconography", + "uid": "github/aranyics/ReDCM", + "url": "https://github.com/aranyics/ReDCM", + "rel": "/software/repository/github/aranyics/ReDCM", + "avatar": "https://avatars.githubusercontent.com/u/9675098?v=4", + "description": "Reimplementation of DCM12 algorithm in R language", "topics": [] }, { - "uid": "github/PFPE/shipgrav", - "url": "https://github.com/PFPE/shipgrav", - "rel": "/software/repository/github/PFPE/shipgrav", - "avatar": "https://avatars.githubusercontent.com/u/173928896?v=4", - "description": "Marine gravity processing for UNOLS (Python)", + "uid": "github/siminegroup/E2EDNA2", + "url": "https://github.com/siminegroup/E2EDNA2", + "rel": "/software/repository/github/siminegroup/E2EDNA2", + "avatar": "https://avatars.githubusercontent.com/u/98241471?v=4", + "description": null, "topics": [] }, { - "uid": "github/iain-mcdonald/PySSED", - "url": "https://github.com/iain-mcdonald/PySSED", - "rel": "/software/repository/github/iain-mcdonald/PySSED", - "avatar": "https://avatars.githubusercontent.com/u/84905141?v=4", - "description": null, + "uid": "github/AnthonyOfSeattle/pyAscoreValidation", + "url": "https://github.com/AnthonyOfSeattle/pyAscoreValidation", + "rel": "/software/repository/github/AnthonyOfSeattle/pyAscoreValidation", + "avatar": "https://avatars.githubusercontent.com/u/33529904?v=4", + "description": "Validation experiments for the pyAscore python package.", "topics": [] }, { - "uid": "github/PyFstat/PyFstat", - "url": "https://github.com/PyFstat/PyFstat", - "rel": "/software/repository/github/PyFstat/PyFstat", - "avatar": "https://avatars.githubusercontent.com/u/60369643?v=4", - "description": "a python package for gravitational wave analysis with the F-statistic", - "topics": [ - "python3", - "gravitational-waves", - "ligo", - "neutron-star", - "virgo", - "gravity", - "astrophysics", - "pycuda" - ] + "uid": "github/nick-youngblut/gtdb_to_taxdump", + "url": "https://github.com/nick-youngblut/gtdb_to_taxdump", + "rel": "/software/repository/github/nick-youngblut/gtdb_to_taxdump", + "avatar": "https://avatars.githubusercontent.com/u/2468572?v=4", + "description": "Convert GTDB taxonomy to NCBI taxdump format", + "topics": [] }, { - "uid": "github/alchemistry/alchemlyb", - "url": "https://github.com/alchemistry/alchemlyb", - "rel": "/software/repository/github/alchemistry/alchemlyb", - "avatar": "https://avatars.githubusercontent.com/u/19521918?v=4", - "description": "the simple alchemistry library", + "uid": "github/Critical-Infrastructure-Systems-Lab/PowNet", + "url": "https://github.com/Critical-Infrastructure-Systems-Lab/PowNet", + "rel": "/software/repository/github/Critical-Infrastructure-Systems-Lab/PowNet", + "avatar": "https://avatars.githubusercontent.com/u/133989297?v=4", + "description": "PowNet: Network-constrained Unit Commitment / Economic Dispatch model in Python", "topics": [ - "science", - "free-energy", + "power-system-analysis", + "unit-commitment", + "economic-dispatch", + "transmission", + "dc-flow", + "n-1-criterion", + "water-energy-nexus", "python", - "library", - "molecular-dynamics" + "dispatchable-units", + "renewable-resources", + "electricity-supply", + "substations" ] }, { - "uid": "github/cupy/cupy", - "url": "https://github.com/cupy/cupy", - "rel": "/software/repository/github/cupy/cupy", - "avatar": "https://avatars2.githubusercontent.com/u/23187665?v=4", - "description": "NumPy-like API accelerated with CUDA", + "uid": "github/nu-radio/NuRadioMC", + "url": "https://github.com/nu-radio/NuRadioMC", + "rel": "/software/repository/github/nu-radio/NuRadioMC", + "avatar": "https://avatars.githubusercontent.com/u/40645116?v=4", + "description": "A Monte Carlo simulation package for radio neutrino detectors", "topics": [ - "cuda", - "cudnn", - "cublas", - "cusolver", - "nccl", - "python", - "numpy", - "cupy", - "curand", - "cusparse", - "gpu", - "cutensor", - "scipy", - "nvtx", - "nvrtc" + "simulation", + "neutrino", + "radio" ] }, { - "uid": "github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", - "url": "https://github.com/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", - "rel": "/software/repository/github/FAIR-data-for-CAPACITY/FHIR-to-CAPACITY", - "avatar": "https://avatars.githubusercontent.com/u/67900459?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/enthought/vpsearch", - "url": "https://github.com/enthought/vpsearch", - "rel": "/software/repository/github/enthought/vpsearch", - "avatar": "https://avatars.githubusercontent.com/u/539651?v=4", - "description": "Fast similarity search for genomic sequences via vantage-point trees", + "uid": "github/usnistgov/imppy3d", + "url": "https://github.com/usnistgov/imppy3d", + "rel": "/software/repository/github/usnistgov/imppy3d", + "avatar": "https://avatars.githubusercontent.com/u/5330158?v=4", + "description": "Image processing in python for 3d image stacks", "topics": [] }, { - "uid": "github/enthought/mayavi", - "url": "https://github.com/enthought/mayavi", - "rel": "/software/repository/github/enthought/mayavi", - "avatar": "https://avatars.githubusercontent.com/u/539651?v=4", - "description": "3D visualization of scientific data in Python", + "uid": "github/csabiu/kstat", + "url": "https://github.com/csabiu/kstat", + "rel": "/software/repository/github/csabiu/kstat", + "avatar": "https://avatars.githubusercontent.com/u/251150?v=4", + "description": "Fast KD-tree MPI correlation statistics package - Author: Cristiano Sabiu", "topics": [] }, { - "uid": "github/hildebra/sdm", - "url": "https://github.com/hildebra/sdm", - "rel": "/software/repository/github/hildebra/sdm", - "avatar": "https://avatars.githubusercontent.com/u/19647604?v=4", - "description": "Fast tool for sequence related tasks", + "uid": "github/jdcphysics/validation", + "url": "https://github.com/jdcphysics/validation", + "rel": "/software/repository/github/jdcphysics/validation", + "avatar": "https://avatars.githubusercontent.com/u/16171392?v=4", + "description": "codes to compare simulation data to various observations", "topics": [] }, { - "uid": "github/hildebra/LCA", - "url": "https://github.com/hildebra/LCA", - "rel": "/software/repository/github/hildebra/LCA", - "avatar": "https://avatars.githubusercontent.com/u/19647604?v=4", - "description": "least common ancestor evaluation given tax database and ", + "uid": "github/jpuritz/dDocent", + "url": "https://github.com/jpuritz/dDocent", + "rel": "/software/repository/github/jpuritz/dDocent", + "avatar": "https://avatars.githubusercontent.com/u/4837703?v=4", + "description": "a bash pipeline for RAD sequencing", "topics": [] }, { - "uid": "github/paranoya/population-synthesis-toolkit", - "url": "https://github.com/paranoya/population-synthesis-toolkit", - "rel": "/software/repository/github/paranoya/population-synthesis-toolkit", - "avatar": "https://avatars.githubusercontent.com/u/24282523?v=4", - "description": "A Python library for stellar population synthesis in galaxies: spectral synthesis, broadband photometry, SED fitting, etc.", - "topics": [ - "astronomy-astrophysics", - "galaxies" - ] - }, - { - "uid": "github/cdw9bf/CompactGroup", - "url": "https://github.com/cdw9bf/CompactGroup", - "rel": "/software/repository/github/cdw9bf/CompactGroup", - "avatar": "https://avatars.githubusercontent.com/u/10886716?v=4", - "description": "Code to recreate the results of Wiens et al 2019 (https://authors.library.caltech.edu/93762/)", + "uid": "github/SJLeo/FFSD", + "url": "https://github.com/SJLeo/FFSD", + "rel": "/software/repository/github/SJLeo/FFSD", + "avatar": "https://avatars.githubusercontent.com/u/25793304?v=4", + "description": "Pytorch implementation of our paper accepted by IEEE TNNLS, 2022 -- Distilling a Powerful Student Model via Online Knowledge Distillation", "topics": [] }, { - "uid": "github/sinc-lab/miRe2e", - "url": "https://github.com/sinc-lab/miRe2e", - "rel": "/software/repository/github/sinc-lab/miRe2e", - "avatar": "https://avatars.githubusercontent.com/u/44381855?v=4", + "uid": "github/MayaWaves/mayawaves", + "url": "https://github.com/MayaWaves/mayawaves", + "rel": "/software/repository/github/MayaWaves/mayawaves", + "avatar": "https://avatars.githubusercontent.com/u/75278294?v=4", "description": null, "topics": [] }, { - "uid": "github/Pinlyu3/LRLoop", - "url": "https://github.com/Pinlyu3/LRLoop", - "rel": "/software/repository/github/Pinlyu3/LRLoop", - "avatar": "https://avatars.githubusercontent.com/u/76225738?v=4", - "description": "LRLoop", + "uid": "github/mwalmsley/zoobot", + "url": "https://github.com/mwalmsley/zoobot", + "rel": "/software/repository/github/mwalmsley/zoobot", + "avatar": "https://avatars.githubusercontent.com/u/7740526?v=4", + "description": "Classifies galaxy morphology with Bayesian CNN", "topics": [] }, { - "uid": "github/tsipkens/atems", - "url": "https://github.com/tsipkens/atems", - "rel": "/software/repository/github/tsipkens/atems", - "avatar": "https://avatars.githubusercontent.com/u/25955212?v=4", - "description": "A MATLAB codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.", - "topics": [ - "soot", - "aggregates", - "transmission-electron-microscopy", - "particle-size-distribution", - "tem", - "tem-images", - "particle-diameter", - "aerosols", - "image-processing" - ] - }, - { - "uid": "github/quatrope/feets", - "url": "https://github.com/quatrope/feets", - "rel": "/software/repository/github/quatrope/feets", - "avatar": "https://avatars.githubusercontent.com/u/53583309?v=4", - "description": "feATURE eXTRACTOR FOR tIME sERIES", - "topics": [ - "machine-learning", - "feature-extraction", - "timeseries", - "astronomy", - "python2", - "python3", - "scipy", - "astropy" - ] + "uid": "github/Lindt8/PHITS-Tools", + "url": "https://github.com/Lindt8/PHITS-Tools", + "rel": "/software/repository/github/Lindt8/PHITS-Tools", + "avatar": "https://avatars.githubusercontent.com/u/7330668?v=4", + "description": "Python package for parsing and post-processing output from the PHITS code ", + "topics": [] }, { - "uid": "github/quatrope/ProperImage", - "url": "https://github.com/quatrope/ProperImage", - "rel": "/software/repository/github/quatrope/ProperImage", - "avatar": "https://avatars.githubusercontent.com/u/53583309?v=4", - "description": "Proper Image utils for astronomy. ", - "topics": [ - "data-analysis-python", - "image-processing", - "coaad-images", - "psf-estimation", - "astronomy", - "zogy", - "image-difference", - "python", - "dia", - "image-subtraction" - ] + "uid": "github/sfeeney/ddspectra", + "url": "https://github.com/sfeeney/ddspectra", + "rel": "/software/repository/github/sfeeney/ddspectra", + "avatar": "https://avatars.githubusercontent.com/u/7850768?v=4", + "description": "SSSpaNG: Stellar Spectra as Sparse Non-Gaussian Processes", + "topics": [] }, { - "uid": "github/FluidityProject/fluidity", - "url": "https://github.com/FluidityProject/fluidity", - "rel": "/software/repository/github/FluidityProject/fluidity", - "avatar": "https://avatars.githubusercontent.com/u/7604133?v=4", - "description": "Fluidity", + "uid": "github/sfeeney/hh0", + "url": "https://github.com/sfeeney/hh0", + "rel": "/software/repository/github/sfeeney/hh0", + "avatar": "https://avatars.githubusercontent.com/u/7850768?v=4", + "description": "Hierarchical Hubble Constant Inference", "topics": [] }, { - "uid": "github/marco-oliva/pfp", - "url": "https://github.com/marco-oliva/pfp", - "rel": "/software/repository/github/marco-oliva/pfp", - "avatar": "https://avatars.githubusercontent.com/u/55564108?v=4", - "description": "Prefix Free Parsing", + "uid": "github/swagnercarena/ovejero", + "url": "https://github.com/swagnercarena/ovejero", + "rel": "/software/repository/github/swagnercarena/ovejero", + "avatar": "https://avatars.githubusercontent.com/u/8857025?v=4", + "description": "Conducts hierarchical inference of strongly-lensed systems with Bayesian neural networks", "topics": [] }, { - "uid": "github/martibosch/detectree", - "url": "https://github.com/martibosch/detectree", - "rel": "/software/repository/github/martibosch/detectree", - "avatar": "https://avatars0.githubusercontent.com/u/5831581?v=4", - "description": "Tree detection from aerial imagery in Python", + "uid": "github/swagnercarena/paltas", + "url": "https://github.com/swagnercarena/paltas", + "rel": "/software/repository/github/swagnercarena/paltas", + "avatar": "https://avatars.githubusercontent.com/u/8857025?v=4", + "description": "Conduct simulation-based inference on strong gravitational lensing systems.", "topics": [ - "tree-detection", - "tree-pixels", - "tree-canopy", - "remote-sensing", - "python", - "image-segmentation" + "simulation-based-inference", + "neural-network", + "astrophysics", + "cosmology", + "hierarchical-model" ] }, { - "uid": "github/simon-smart88/shinyscholar", - "url": "https://github.com/simon-smart88/shinyscholar", - "rel": "/software/repository/github/simon-smart88/shinyscholar", - "avatar": "https://avatars.githubusercontent.com/u/137152810?v=4", - "description": "A template for creating modular shiny applications that meet academic standards and are reproducible", - "topics": [] - }, - { - "uid": "github/jacobmerson/model-traits", - "url": "https://github.com/jacobmerson/model-traits", - "rel": "/software/repository/github/jacobmerson/model-traits", - "avatar": "https://avatars.githubusercontent.com/u/2366140?v=4", - "description": "simple library for dealing with simulation boundary conditions", - "topics": [] - }, - { - "uid": "github/slcs-jsc/mptrac", - "url": "https://github.com/slcs-jsc/mptrac", - "rel": "/software/repository/github/slcs-jsc/mptrac", - "avatar": "https://avatars.githubusercontent.com/u/14200814?v=4", - "description": "Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.", + "uid": "github/idem-lab/conmat", + "url": "https://github.com/idem-lab/conmat", + "rel": "/software/repository/github/idem-lab/conmat", + "avatar": "https://avatars.githubusercontent.com/u/146308556?v=4", + "description": "Create Contact Matrices from Population Data", "topics": [ - "atmospheric-modelling", - "dispersion-model", - "stratosphere", - "trajectories", - "dispersion", - "atmospheric-science", - "climate", - "climate-science", - "troposphere", - "meteorology", - "high-performance-computing" + "contact-matrices", + "population-data", + "r", + "public-health", + "infectious-diseases" ] }, { - "uid": "github/AgentOxygen/HDP", - "url": "https://github.com/AgentOxygen/HDP", - "rel": "/software/repository/github/AgentOxygen/HDP", - "avatar": "https://avatars.githubusercontent.com/u/13355009?v=4", - "description": "Heatwave Diagnostics Package (HDP) for efficiently quantifying multiple heatwave metrics from GCM output across large parameters spaces.", + "uid": "github/jeremysanders/ggm", + "url": "https://github.com/jeremysanders/ggm", + "rel": "/software/repository/github/jeremysanders/ggm", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Gaussian gradient magnitude filtering of astronomical images", "topics": [] }, { - "uid": "github/taxprofiler/taxpasta", - "url": "https://github.com/taxprofiler/taxpasta", - "rel": "/software/repository/github/taxprofiler/taxpasta", - "avatar": "https://avatars.githubusercontent.com/u/104501065?v=4", - "description": "TAXnomic Profile Aggregation and STAndardisation", - "topics": [ - "metagenomics", - "python", - "standardisation", - "bioinformatics", - "profiling", - "classification", - "metagenomic-classification", - "taxonomic-classifications", - "taxonomic-profiling" - ] - }, - { - "uid": "github/splicebox/PsiCLASS", - "url": "https://github.com/splicebox/PsiCLASS", - "rel": "/software/repository/github/splicebox/PsiCLASS", - "avatar": "https://avatars.githubusercontent.com/u/39348708?v=4", - "description": "Simultaneous multi-sample transcript assembler for RNA-seq data", + "uid": "github/jeremysanders/xspec_emcee", + "url": "https://github.com/jeremysanders/xspec_emcee", + "rel": "/software/repository/github/jeremysanders/xspec_emcee", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Use EMCEE to do MCMC analyses of spectra in XSPEC", "topics": [] }, { - "uid": "github/tensorflow/tensorflow", - "url": "https://github.com/tensorflow/tensorflow", - "rel": "/software/repository/github/tensorflow/tensorflow", - "avatar": "https://avatars1.githubusercontent.com/u/15658638?v=4", - "description": "An Open Source Machine Learning Framework for Everyone", - "topics": [ - "tensorflow", - "machine-learning", - "python", - "deep-learning", - "deep-neural-networks", - "neural-network", - "ml", - "distributed" - ] + "uid": "github/jeremysanders/contbin", + "url": "https://github.com/jeremysanders/contbin", + "rel": "/software/repository/github/jeremysanders/contbin", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Contour binning code", + "topics": [] }, { - "uid": "github/mianbreton/pysco", - "url": "https://github.com/mianbreton/pysco", - "rel": "/software/repository/github/mianbreton/pysco", - "avatar": "https://avatars.githubusercontent.com/u/72379931?v=4", - "description": "Cosmological N-body code with modified gravity theories", + "uid": "github/jeremysanders/dsdeproj", + "url": "https://github.com/jeremysanders/dsdeproj", + "rel": "/software/repository/github/jeremysanders/dsdeproj", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Direct Spectral Deprojection code", "topics": [] }, { - "uid": "github/CarlosCoba/XookSuut-code", - "url": "https://github.com/CarlosCoba/XookSuut-code", - "rel": "/software/repository/github/CarlosCoba/XookSuut-code", - "avatar": "https://avatars.githubusercontent.com/u/47892914?v=4", - "description": "XookSuut is a python tool for modeling non-circular flows in galaxies with resolved velocity maps.", + "uid": "github/jeremysanders/spex_to_xspec", + "url": "https://github.com/jeremysanders/spex_to_xspec", + "rel": "/software/repository/github/jeremysanders/spex_to_xspec", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Tool to dump SPEX spectral models into APEC-format tables", "topics": [] }, { - "uid": "github/BGPS/distance-omnibus", - "url": "https://github.com/BGPS/distance-omnibus", - "rel": "/software/repository/github/BGPS/distance-omnibus", - "avatar": "https://avatars.githubusercontent.com/u/3277857?v=4", - "description": "Distance estimation method for molecular cloud clumps in the Milky Way", + "uid": "github/jeremysanders/mbproj2", + "url": "https://github.com/jeremysanders/mbproj2", + "rel": "/software/repository/github/jeremysanders/mbproj2", + "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", + "description": "Multi-Band x-ray surface brightness PROJector 2", "topics": [] }, { - "uid": "github/biolab/orange-bio", - "url": "https://github.com/biolab/orange-bio", - "rel": "/software/repository/github/biolab/orange-bio", - "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", + "uid": "github/KonstantinLeyde/light", + "url": "https://github.com/KonstantinLeyde/light", + "rel": "/software/repository/github/KonstantinLeyde/light", + "avatar": "https://avatars.githubusercontent.com/u/181947797?v=4", "description": null, "topics": [] }, { - "uid": "github/biolab/orange3-network", - "url": "https://github.com/biolab/orange3-network", - "rel": "/software/repository/github/biolab/orange3-network", - "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", - "description": "\ud83c\udf4a \ud83d\udd78 Network analysis add-on for Orange data mining suite.", - "topics": [ - "orange", - "network", - "network-analysis", - "graph", - "clique", - "visualization" - ] + "uid": "github/jiangyuts/facetclumps", + "url": "https://github.com/JiangYuTS/FacetClumps", + "rel": "/software/repository/github/jiangyuts/facetclumps", + "avatar": "https://avatars.githubusercontent.com/u/123626665?v=4", + "description": "FacetClumps: A molecular clump detection algorithm based on Facet model", + "topics": [] }, { - "uid": "github/biolab/orange3", - "url": "https://github.com/biolab/orange3", - "rel": "/software/repository/github/biolab/orange3", - "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", - "description": "\ud83c\udf4a :bar_chart: :bulb: Orange: Interactive data analysis https://orange.biolab.si", - "topics": [ - "data-mining", - "data-science", - "machine-learning", - "data-visualization", - "orange", - "python", - "scikit-learn", - "numpy", - "scipy", - "pandas", - "decision-trees", - "clustering", - "visualization", - "orange3", - "random-forest", - "plotting", - "chart", - "classification", - "regression", - "visual-programming" - ] + "uid": "github/vedantchandra/wdtools", + "url": "https://github.com/vedantchandra/wdtools", + "rel": "/software/repository/github/vedantchandra/wdtools", + "avatar": "https://avatars.githubusercontent.com/u/5503442?v=4", + "description": "computational tools for the spectroscopic analysis of white dwarfs", + "topics": [] }, { - "uid": "github/drcandacemakedamoore/cleanX", - "url": "https://github.com/drcandacemakedamoore/cleanX", - "rel": "/software/repository/github/drcandacemakedamoore/cleanX", - "avatar": "https://avatars.githubusercontent.com/u/31033601?v=4", - "description": "Python library for exploring, cleaning, normalizing, and augmenting large datasets of radiological data.", + "uid": "github/OpenGene/fastplong", + "url": "https://github.com/OpenGene/fastplong", + "rel": "/software/repository/github/OpenGene/fastplong", + "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", + "description": "Ultra-fast preprocessing and quality control for long-read sequencing data", "topics": [] }, { - "uid": "github/yuefan98/nleis.py", - "url": "https://github.com/yuefan98/nleis.py", - "rel": "/software/repository/github/yuefan98/nleis.py", - "avatar": "https://avatars.githubusercontent.com/u/97193085?v=4", - "description": "A NLEIS toolbox for impedance.py that provides RC level nonlinear equivalent circuit modeling (nECM) and analysis", + "uid": "github/OpenGene/fastv", + "url": "https://github.com/OpenGene/fastv", + "rel": "/software/repository/github/OpenGene/fastv", + "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", + "description": "An ultra-fast tool for identification of SARS-CoV-2 and other microbes from sequencing data. This tool can be used to detect viral infectious diseases, like COVID-19.", "topics": [ - "eis", - "electrochemistry", - "2nd-nleis", - "lithium-ion-batteries", - "impedance-py", - "battery", - "fuel-cell" + "covid-19", + "sars-cov-2", + "hcov", + "2019-ncov", + "sequencing", + "bioinformatics", + "ngs", + "mngs", + "coronavirus", + "covid", + "viral-infectious-diseases", + "viral", + "virus", + "microbial-sequences", + "meta-genomics", + "visualization" ] }, { - "uid": "github/Orin-beep/PlasGO", - "url": "https://github.com/Orin-beep/PlasGO", - "rel": "/software/repository/github/Orin-beep/PlasGO", - "avatar": "https://avatars.githubusercontent.com/u/56922562?v=4", - "description": null, - "topics": [] + "uid": "github/OpenGene/fastp", + "url": "https://github.com/OpenGene/fastp", + "rel": "/software/repository/github/OpenGene/fastp", + "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", + "description": "An ultra-fast all-in-one FASTQ preprocessor (QC/adapters/trimming/filtering/splitting/merging...)", + "topics": [ + "fastq", + "qc", + "preprocessing", + "filtering", + "adapter", + "overlap", + "quality", + "trimming", + "splitting", + "quality-control", + "filter", + "ngs", + "bioinformatics", + "umi", + "sequencing", + "illumina", + "polyg", + "duplication", + "merging" + ] }, { - "uid": "github/abeelen/powspec", - "url": "https://github.com/abeelen/powspec", - "rel": "/software/repository/github/abeelen/powspec", - "avatar": "https://avatars.githubusercontent.com/u/3973209?v=4", - "description": "Power and cross spectral density of 2D arrays", + "uid": "github/OpenGene/repaq", + "url": "https://github.com/OpenGene/repaq", + "rel": "/software/repository/github/OpenGene/repaq", + "avatar": "https://avatars.githubusercontent.com/u/16162853?v=4", + "description": "A fast lossless FASTQ compressor with ultra-high compression ratio", "topics": [] }, { - "uid": "github/UUDigitalHumanitieslab/texcavator", - "url": "https://github.com/UUDigitalHumanitieslab/texcavator", - "rel": "/software/repository/github/UUDigitalHumanitieslab/texcavator", - "avatar": "https://avatars3.githubusercontent.com/u/7656260?v=4", - "description": "Text mining on the Royal Library newspaper corpus", + "uid": "github/Balaje/iceFem", + "url": "https://github.com/Balaje/iceFem", + "rel": "/software/repository/github/Balaje/iceFem", + "avatar": "https://avatars.githubusercontent.com/u/4852064?v=4", + "description": "Contains FreeFem source codes for modelling wave induced ice-shelf vibrations", "topics": [ - "python", - "django", - "elasticsearch", - "dojo" + "freefem", + "ice-shelf" ] }, { - "uid": "github/sylvainprigent/napari-tracks-reader", - "url": "https://github.com/sylvainprigent/napari-tracks-reader", - "rel": "/software/repository/github/sylvainprigent/napari-tracks-reader", - "avatar": "https://avatars.githubusercontent.com/u/9695951?v=4", - "description": "napari reader plugin for tracking", + "uid": "github/ropensci-archive/monkeylearn", + "url": "https://github.com/ropensci-archive/monkeylearn", + "rel": "/software/repository/github/ropensci-archive/monkeylearn", + "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", + "description": ":no_entry: ARCHIVED :no_entry: :monkey: R package for text analysis with Monkeylearn :monkey:", "topics": [ - "napari-plugin" + "monkeylearn", + "nlp", + "nlp-machine-learning", + "extractor", + "classifier", + "r", + "rstats", + "r-package", + "peer-reviewed", + "classifier", + "extractor", + "monkeylearn", + "nlp", + "nlp-machine-learning", + "peer-reviewed", + "data-access" ] }, { - "uid": "github/jonaspleyer/cellular_raza", - "url": "https://github.com/jonaspleyer/cellular_raza", - "rel": "/software/repository/github/jonaspleyer/cellular_raza", - "avatar": "https://avatars.githubusercontent.com/u/59249415?v=4", - "description": "Cellular agent-based modeling from a clean slate", + "uid": "github/ropensci-archive/rodev", + "url": "https://github.com/ropensci-archive/rodev", + "rel": "/software/repository/github/ropensci-archive/rodev", + "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", + "description": "Helpers for rOpenSci Package Authors :package: :sparkles:", "topics": [ - "agent-based", - "agent-based-modeling", - "biology", - "cellular", - "rust", - "rust-library", - "simulation" + "r", + "r-package", + "rstats", + "scalereprod" ] }, { - "uid": "github/GalagaBits/JWST-FGS-Spelunker", - "url": "https://github.com/GalagaBits/JWST-FGS-Spelunker", - "rel": "/software/repository/github/GalagaBits/JWST-FGS-Spelunker", - "avatar": "https://avatars.githubusercontent.com/u/34511693?v=4", - "description": "JWST FGS Spelunker is a package that assists and finds technical anomalies from the JWST and stellar properties from guidestars.", + "uid": "github/ropensci-archive/arresteddev", + "url": "https://github.com/ropensci-archive/arresteddev", + "rel": "/software/repository/github/ropensci-archive/arresteddev", + "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", + "description": "Arrested Development", "topics": [ - "fgs", - "guidestar", - "jwst" + "unconf17", + "r", + "r-package", + "rstats", + "unconf", + "unconf", + "unconf17" ] }, { - "uid": "github/cistib/origami", - "url": "https://github.com/cistib/origami", - "rel": "/software/repository/github/cistib/origami", - "avatar": "https://avatars.githubusercontent.com/u/73349299?v=4", - "description": "MATLAB-based image analysis pipeline for extracting single-cell direction-variant shape features from fluorescence images of folding epithelial sheets.", + "uid": "github/ropensci-archive/reviewer", + "url": "https://github.com/ropensci-archive/reviewer", + "rel": "/software/repository/github/ropensci-archive/reviewer", + "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", + "description": ":no_entry: ARCHIVED :no_entry: Improving the track changes and reviewing experience in R markdown", "topics": [ - "matlab-code", - "microscopy", - "image-processing" + "ozunconf18", + "unconf", + "r", + "r-package", + "rstats", + "ozunconf18", + "unconf", + "scalereprod" ] }, { - "uid": "github/Tarskin/LaCyTools", - "url": "https://github.com/Tarskin/LaCyTools", - "rel": "/software/repository/github/Tarskin/LaCyTools", - "avatar": "https://avatars.githubusercontent.com/u/4366212?v=4", - "description": "A high-throughput data extraction package for LC-MS data.", + "uid": "github/nasa/simupy-flight", + "url": "https://github.com/nasa/simupy-flight", + "rel": "/software/repository/github/nasa/simupy-flight", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": null, "topics": [] }, { - "uid": "github/OSUDSL/pydre", - "url": "https://github.com/OSUDSL/pydre", - "rel": "/software/repository/github/OSUDSL/pydre", - "avatar": "https://avatars.githubusercontent.com/u/71854689?v=4", - "description": "Driving simulation Data Reduction Engine ", - "topics": [] + "uid": "github/nasa/ncompare", + "url": "https://github.com/nasa/ncompare", + "rel": "/software/repository/github/nasa/ncompare", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": "Compare the structure of two netCDF files at the command line", + "topics": [ + "data-comparison", + "netcdf", + "hierarchical-data" + ] }, { - "uid": "github/MDamiano/ExoTR", - "url": "https://github.com/MDamiano/ExoTR", - "rel": "/software/repository/github/MDamiano/ExoTR", - "avatar": "https://avatars.githubusercontent.com/u/7510364?v=4", - "description": "A Bayesian inverse retrieval algorithm to interpret exoplanetary transmission spectra. ", + "uid": "github/nasa/kepler-robovetter", + "url": "https://github.com/nasa/kepler-robovetter", + "rel": "/software/repository/github/nasa/kepler-robovetter", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": null, "topics": [] }, { - "uid": "github/DorianDepriester/mtex2Gmsh", - "url": "https://github.com/DorianDepriester/MTEX2Gmsh", - "rel": "/software/repository/github/DorianDepriester/mtex2Gmsh", - "avatar": "https://avatars3.githubusercontent.com/u/7643875?v=4", - "description": "Matlab toolbox for generating 2D meshes from EBSD data", + "uid": "github/nasa/exoscene", + "url": "https://github.com/nasa/exoscene", + "rel": "/software/repository/github/nasa/exoscene", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": null, "topics": [] }, { - "uid": "github/mlipatov/paint_atmospheres", - "url": "https://github.com/mlipatov/paint_atmospheres", - "rel": "/software/repository/github/mlipatov/paint_atmospheres", - "avatar": "https://avatars.githubusercontent.com/u/2157807?v=4", - "description": "Synthetic spectra of rotating stars", + "uid": "github/nasa/Kamodo", + "url": "https://github.com/nasa/Kamodo", + "rel": "/software/repository/github/nasa/Kamodo", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": null, "topics": [] }, { - "uid": "github/harrispopgen/mutyper", - "url": "https://github.com/harrispopgen/mutyper", - "rel": "/software/repository/github/harrispopgen/mutyper", - "avatar": "https://avatars.githubusercontent.com/u/36174395?v=4", - "description": "Ancestral k-mer mutation types for SNP data", + "uid": "github/nasa/KeplerPORTs", + "url": "https://github.com/nasa/KeplerPORTs", + "rel": "/software/repository/github/nasa/KeplerPORTs", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": null, "topics": [] }, { - "uid": "github/hyattpd/Prodigal", - "url": "https://github.com/hyattpd/Prodigal", - "rel": "/software/repository/github/hyattpd/Prodigal", - "avatar": "https://avatars.githubusercontent.com/u/4992459?v=4", - "description": "Prodigal Gene Prediction Software", + "uid": "github/nasa/prog_models", + "url": "https://github.com/nasa/prog_models", + "rel": "/software/repository/github/nasa/prog_models", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": "The NASA Prognostic Model Package is a Python framework focused on defining and building models for prognostics (computation of remaining useful life) of engineering systems, and provides a set of prognostics models for select components developed within this framework, suitable for use in prognostics applications for these components.", + "topics": [ + "simulation", + "modeling", + "prognostics", + "prognostic-models", + "prognostics-health-management" + ] + }, + { + "uid": "github/nasa/K2CE", + "url": "https://github.com/nasa/K2CE", + "rel": "/software/repository/github/nasa/K2CE", + "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", + "description": "Kepler K2 Cadence Events (K2CE) is a Python data visualization and manipulation tool for astronomers to identify and remove cadences (observations) associated with problematic thruster events, thus producing cleaner light curves. K2CE was designed to work with standard Kepler or K2 data products: long-cadence (30 min) and short-cadence (1 min) light curve files and long-cadence and short-cadence target pixel files. The tool has been modified to work with light curve files and target pixel files from the TESS mission.", "topics": [] }, { - "uid": "github/Kkritos/Rapster", - "url": "https://github.com/Kkritos/Rapster", - "rel": "/software/repository/github/Kkritos/Rapster", - "avatar": "https://avatars.githubusercontent.com/u/82104258?v=4", - "description": "Rapid population synthesis code for binary black hole mergers in dynamical environments.", + "uid": "github/RavenGan/GR2D2", + "url": "https://github.com/RavenGan/GR2D2", + "rel": "/software/repository/github/RavenGan/GR2D2", + "avatar": "https://avatars.githubusercontent.com/u/46891773?v=4", + "description": "Take Monte Carlo samples from the posterior distribution based on the graphical R2D2 prior, to estimate the precision matrix for multivariate Gaussian data", "topics": [] }, { - "uid": "github/JuliaPOMDP/CompressedBeliefMDPs.jl", - "url": "https://github.com/JuliaPOMDP/CompressedBeliefMDPs.jl", - "rel": "/software/repository/github/JuliaPOMDP/CompressedBeliefMDPs.jl", - "avatar": "https://avatars.githubusercontent.com/u/16347008?v=4", - "description": "A Julia package for solving POMDPs with belief compression. Part of the POMDPs.jl community.", + "uid": "github/nworbde/dStar", + "url": "https://github.com/nworbde/dStar", + "rel": "/software/repository/github/nworbde/dStar", + "avatar": "https://avatars.githubusercontent.com/u/7050112?v=4", + "description": "routines for computing neutron star structure and evolution", "topics": [ - "artificial-intelligence", - "compression", - "dimensionality-reduction", - "julia", - "markov-decision-processes", - "mdps", - "pomdps", - "reinforcement-learning" + "neutron-stars", + "x-ray-binaries", + "astrophysics" ] }, { - "uid": "github/lehtiolab/msstitch", - "url": "https://github.com/lehtiolab/msstitch", - "rel": "/software/repository/github/lehtiolab/msstitch", - "avatar": "https://avatars.githubusercontent.com/u/32761652?v=4", - "description": "MS proteomics post-processing utilities", - "topics": [] + "uid": "github/jean-pierreBoth/gsearch", + "url": "https://github.com/jean-pierreBoth/gsearch", + "rel": "/software/repository/github/jean-pierreBoth/gsearch", + "avatar": "https://avatars.githubusercontent.com/u/19845045?v=4", + "description": "Approximate nearest neighbour search for microbial genomes based on hash metric", + "topics": [ + "average-nucleotide-identity", + "nearest-neighbor-search", + "probminhash-similarity" + ] }, { - "uid": "github/tariks/peakachu", - "url": "https://github.com/tariks/peakachu", - "rel": "/software/repository/github/tariks/peakachu", - "avatar": "https://avatars3.githubusercontent.com/u/3433086?v=4", - "description": "Genome-wide contact analysis using sklearn", - "topics": [] + "uid": "github/labsquare/CutePeaks", + "url": "https://github.com/labsquare/CutePeaks", + "rel": "/software/repository/github/labsquare/CutePeaks", + "avatar": "https://avatars.githubusercontent.com/u/2106259?v=4", + "description": "CutePeaks is a standalone Sanger trace viewer steered by a modern and user-friendly UI.", + "topics": [ + "sanger-chromatograms", + "ab1", + "scf" + ] + }, + { + "uid": "github/fritzsedlazeck/Sniffles", + "url": "https://github.com/fritzsedlazeck/Sniffles", + "rel": "/software/repository/github/fritzsedlazeck/Sniffles", + "avatar": "https://avatars.githubusercontent.com/u/2081951?v=4", + "description": "Structural variation caller using third generation sequencing", + "topics": [ + "bioinformatics", + "structural-variations", + "ngm-lr", + "pacbio", + "nanopore", + "structural-variation", + "bioconda" + ] + }, + { + "uid": "github/fritzsedlazeck/SURVIVOR", + "url": "https://github.com/fritzsedlazeck/SURVIVOR", + "rel": "/software/repository/github/fritzsedlazeck/SURVIVOR", + "avatar": "https://avatars.githubusercontent.com/u/2081951?v=4", + "description": "Toolset for SV simulation, comparison and filtering", + "topics": [ + "bioinformatics", + "structural-variations", + "simulator", + "comparison", + "survivor", + "vcf", + "bioconda" + ] }, { - "uid": "github/awmann/M_-M_K-", - "url": "https://github.com/awmann/M_-M_K-", - "rel": "/software/repository/github/awmann/M_-M_K-", - "avatar": "https://avatars.githubusercontent.com/u/6567968?v=4", - "description": "Code for estimating realistic masses and uncertainties from M_Ks (2MASS Ks + distance)", + "uid": "github/BIC-MNI/libminc", + "url": "https://github.com/BIC-MNI/libminc", + "rel": "/software/repository/github/BIC-MNI/libminc", + "avatar": "https://avatars.githubusercontent.com/u/1517197?v=4", + "description": "libminc is the core library and API of the MINC toolkit", "topics": [] }, { - "uid": "github/eldariont/svim", - "url": "https://github.com/eldariont/svim", - "rel": "/software/repository/github/eldariont/svim", - "avatar": "https://avatars.githubusercontent.com/u/6477692?v=4", - "description": "Structural Variant Identification Method using Long Reads", + "uid": "github/cameron314/concurrentqueue", + "url": "https://github.com/cameron314/concurrentqueue", + "rel": "/software/repository/github/cameron314/concurrentqueue", + "avatar": "https://avatars.githubusercontent.com/u/116235?v=4", + "description": "A fast multi-producer, multi-consumer lock-free concurrent queue for C++11", "topics": [] }, { - "uid": "github/rajmadan96/StochasticDominance.jl", - "url": "https://github.com/rajmadan96/StochasticDominance.jl", - "rel": "/software/repository/github/rajmadan96/StochasticDominance.jl", - "avatar": "https://avatars.githubusercontent.com/u/62553056?v=4", - "description": null, + "uid": "github/SSDataLab/vetting", + "url": "https://github.com/SSDataLab/vetting", + "rel": "/software/repository/github/SSDataLab/vetting", + "avatar": "https://avatars.githubusercontent.com/u/65370866?v=4", + "description": "Simple, stand-alone tools for vetting transit signals in Kepler, K2 and TESS data", "topics": [] }, { - "uid": "github/RAMP-project/RAMP", - "url": "https://github.com/RAMP-project/RAMP", - "rel": "/software/repository/github/RAMP-project/RAMP", - "avatar": "https://avatars.githubusercontent.com/u/65850039?v=4", - "description": "Repository of the open-source RAMP model for generating multi-energy loads profiles", + "uid": "github/SSDataLab/psfmachine", + "url": "https://github.com/SSDataLab/psfmachine", + "rel": "/software/repository/github/SSDataLab/psfmachine", + "avatar": "https://avatars.githubusercontent.com/u/65370866?v=4", + "description": "Tool kit for doing PSF photometry", "topics": [] }, { - "uid": "github/LSSTDESC/CCL", - "url": "https://github.com/LSSTDESC/CCL", - "rel": "/software/repository/github/LSSTDESC/CCL", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "DESC Core Cosmology Library: cosmology routines with validated numerical accuracy", - "topics": [] + "uid": "github/martibosch/detectree", + "url": "https://github.com/martibosch/detectree", + "rel": "/software/repository/github/martibosch/detectree", + "avatar": "https://avatars0.githubusercontent.com/u/5831581?v=4", + "description": "Tree detection from aerial imagery in Python", + "topics": [ + "tree-detection", + "tree-pixels", + "tree-canopy", + "remote-sensing", + "python", + "image-segmentation" + ] }, { - "uid": "github/LSSTDESC/Spectractor", - "url": "https://github.com/LSSTDESC/Spectractor", - "rel": "/software/repository/github/LSSTDESC/Spectractor", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Spectractor aims at measuring the atmospheric transmission from slitless spectrophotometry images.", + "uid": "github/soerenslarsen/ISPy3", + "url": "https://github.com/soerenslarsen/ISPy3", + "rel": "/software/repository/github/soerenslarsen/ISPy3", + "avatar": "https://avatars.githubusercontent.com/u/69246792?v=4", + "description": "Tools for Integrated-light Spectroscopy with Python3", "topics": [] }, { - "uid": "github/LSSTDESC/BlendingToolKit", - "url": "https://github.com/LSSTDESC/BlendingToolKit", - "rel": "/software/repository/github/LSSTDESC/BlendingToolKit", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Tools to create blend catalogs, produce training samples and implement blending metrics", + "uid": "github/jcorbino/mole", + "url": "https://github.com/jcorbino/mole", + "rel": "/software/repository/github/jcorbino/mole", + "avatar": "https://avatars.githubusercontent.com/u/24197859?v=4", + "description": "Mimetic Operators Library Enhanced", "topics": [ - "simulation", - "galaxies", - "tutorials", - "cosmology", - "blending", - "crowded-scenes", - "blended-galaxies" + "pde", + "vector-calculus", + "numerical-methods", + "finite-differences", + "mimetic" ] }, { - "uid": "github/LSSTDESC/sacc", - "url": "https://github.com/LSSTDESC/sacc", - "rel": "/software/repository/github/LSSTDESC/sacc", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Save All Correlations and Covariances", + "uid": "github/bokulich-lab/q2-fondue", + "url": "https://github.com/bokulich-lab/q2-fondue", + "rel": "/software/repository/github/bokulich-lab/q2-fondue", + "avatar": "https://avatars.githubusercontent.com/u/66746566?v=4", + "description": "Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere", "topics": [] }, { - "uid": "github/LSSTDESC/chroma", - "url": "https://github.com/LSSTDESC/chroma", - "rel": "/software/repository/github/LSSTDESC/chroma", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Investigations of chromatic effects for LSST weak lensing, as documented here: https://LSSTDESC.github.io/chroma/ and here:", + "uid": "github/bruce-chappell/SunnyNet", + "url": "https://github.com/bruce-chappell/SunnyNet", + "rel": "/software/repository/github/bruce-chappell/SunnyNet", + "avatar": "https://avatars.githubusercontent.com/u/54310776?v=4", + "description": "Repository for SunnyNet network", "topics": [] }, { - "uid": "github/LSSTDESC/descqa", - "url": "https://github.com/LSSTDESC/descqa", - "rel": "/software/repository/github/LSSTDESC/descqa", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "A validation framework and tests for mock galaxy catalogs and beyond", + "uid": "github/spacetx/starfish", + "url": "https://github.com/spacetx/starfish", + "rel": "/software/repository/github/spacetx/starfish", + "avatar": "https://avatars.githubusercontent.com/u/37218549?v=4", + "description": "starfish: unified pipelines for image-based transcriptomics", "topics": [ - "nersc", - "descqa", - "validation", - "python", - "lsst", - "web-app" + "transcriptomics", + "imaging", + "human-cell-atlas", + "python" ] }, { - "uid": "github/LSSTDESC/WeakLensingDeblending", - "url": "https://github.com/LSSTDESC/WeakLensingDeblending", - "rel": "/software/repository/github/LSSTDESC/WeakLensingDeblending", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Weak lensing fast simulations and analysis of blended objects.", + "uid": "github/izsvenezie-virology/FluMut", + "url": "https://github.com/izsvenezie-virology/FluMut", + "rel": "/software/repository/github/izsvenezie-virology/FluMut", + "avatar": "https://avatars.githubusercontent.com/u/172770299?v=4", + "description": "FluMut is a command-line tool to find markers of interest in H5N1 avian influenza viruses.", "topics": [ - "astronomy", - "python" + "avian-influenza", + "virology", + "flumut", + "izsve", + "izsvenezie", + "zoonotic-markers" ] }, { - "uid": "github/LSSTDESC/snmachine", - "url": "https://github.com/LSSTDESC/snmachine", - "rel": "/software/repository/github/LSSTDESC/snmachine", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "Machine learning code for photometric supernova classification", - "topics": [] - }, - { - "uid": "github/LSSTDESC/NaMaster", - "url": "https://github.com/LSSTDESC/NaMaster", - "rel": "/software/repository/github/LSSTDESC/NaMaster", - "avatar": "https://avatars.githubusercontent.com/u/2731443?v=4", - "description": "A unified pseudo-Cl framework", - "topics": [] + "uid": "github/izsvenezie-virology/genin2", + "url": "https://github.com/izsvenezie-virology/genin2", + "rel": "/software/repository/github/izsvenezie-virology/genin2", + "avatar": "https://avatars.githubusercontent.com/u/172770299?v=4", + "description": "Genin2 is a lightining-fast bioinformatic tool to predict genotypes for H5 viruses belonging to the European clade 2.3.4.4b", + "topics": [ + "avian-influenza", + "genotype-identification" + ] }, { - "uid": "github/scottgigante/picopore", - "url": "https://github.com/scottgigante/picopore", - "rel": "/software/repository/github/scottgigante/picopore", - "avatar": "https://avatars.githubusercontent.com/u/8499679?v=4", - "description": "A tool to reduce the size of Oxford Nanopore Technologies' datasets without losing information", - "topics": [] + "uid": "github/LMBooth/pybci", + "url": "https://github.com/LMBooth/pybci", + "rel": "/software/repository/github/LMBooth/pybci", + "avatar": "https://avatars.githubusercontent.com/u/31129153?v=4", + "description": "Create real-time BCI's with the LSL, PyTorch, SKLearn and TensorFlow packages.", + "topics": [ + "bci", + "brain-computer-interface", + "human-computer-interaction", + "labstreaminglayer", + "machine-learning", + "lsl", + "pytorch", + "sklearn", + "tensorflow", + "human-machine-interface", + "python", + "python-brain-computer-interface" + ] }, { - "uid": "github/hmtabernero/SteParSyn", - "url": "https://github.com/hmtabernero/SteParSyn", - "rel": "/software/repository/github/hmtabernero/SteParSyn", - "avatar": "https://avatars.githubusercontent.com/u/46009226?v=4", - "description": "SteParSyn is an automatic code used to infer stellar atmospheric parameters using the spectral synthesis method. ", + "uid": "github/lazzati-astro/MCRaT", + "url": "https://github.com/lazzati-astro/MCRaT", + "rel": "/software/repository/github/lazzati-astro/MCRaT", + "avatar": "https://avatars.githubusercontent.com/u/24950291?v=4", + "description": "Monte Carlo Radiation Transfer Through an Astrophysical Jet", "topics": [ - "stellar-parameters", - "stellar-atmospheres", - "stellar-astrophysics" + "astrophysics", + "photons", + "hydrodynamic-simulations", + "openmp", + "hdf5", + "mpi", + "simulation", + "radiative-transfer", + "gamma-ray-burst" ] }, { - "uid": "github/ekg/seqwish", - "url": "https://github.com/ekg/seqwish", - "rel": "/software/repository/github/ekg/seqwish", - "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", - "description": "alignment to variation graph inducer", + "uid": "github/TNOCS/csWeb", + "url": "https://github.com/TNOCS/csWeb", + "rel": "/software/repository/github/TNOCS/csWeb", + "avatar": "https://avatars0.githubusercontent.com/u/7793389?v=4", + "description": "csWeb, short for common sense Web, is a userfriendly web application for showing (GIS) data on a map. It allows you to apply multiple filters to filter your data, and to style it, so you can immediately see what's important.", "topics": [] }, { - "uid": "github/ekg/fastahack", - "url": "https://github.com/ekg/fastahack", - "rel": "/software/repository/github/ekg/fastahack", - "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", - "description": "utilities for indexing and sequence extraction from FASTA files", + "uid": "github/FaaSr/FaaSr-package", + "url": "https://github.com/FaaSr/FaaSr-package", + "rel": "/software/repository/github/FaaSr/FaaSr-package", + "avatar": "https://avatars.githubusercontent.com/u/136644711?v=4", + "description": "Function-as-a-Service package for R", "topics": [] }, { - "uid": "github/ekg/tabixpp", - "url": "https://github.com/vcflib/tabixpp", - "rel": "/software/repository/github/ekg/tabixpp", - "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", - "description": "C++ wrapper to tabix indexer", + "uid": "github/markblokpoel/mathlib", + "url": "https://github.com/markblokpoel/mathlib", + "rel": "/software/repository/github/markblokpoel/mathlib", + "avatar": "https://avatars.githubusercontent.com/u/35800854?v=4", + "description": null, "topics": [] }, { - "uid": "github/ekg/freebayes", - "url": "https://github.com/freebayes/freebayes", - "rel": "/software/repository/github/ekg/freebayes", - "avatar": "https://avatars.githubusercontent.com/u/15815823?v=4", - "description": "Bayesian haplotype-based genetic polymorphism discovery and genotyping.", + "uid": "github/ChrisBoettner/skaro", + "url": "https://github.com/ChrisBoettner/skaro", + "rel": "/software/repository/github/ChrisBoettner/skaro", + "avatar": "https://avatars.githubusercontent.com/u/92692767?v=4", + "description": "This project combines the HESTIA suite of high-resolution constrained hydrodynamical galaxy formation simulations with the New Generation Planet Population Synthesis (NGPPS) models from Bern to characterize exoplanet demographics across different regions of the Milky Way.", "topics": [] }, { - "uid": "github/ekg/smithwaterman", - "url": "https://github.com/ekg/smithwaterman", - "rel": "/software/repository/github/ekg/smithwaterman", - "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", - "description": "smith-waterman-gotoh alignment algorithm", - "topics": [] + "uid": "github/asancpt/caffsim", + "url": "https://github.com/asancpt/caffsim", + "rel": "/software/repository/github/asancpt/caffsim", + "avatar": "https://avatars.githubusercontent.com/u/25226054?v=4", + "description": "R package for simulation of caffeine concentration . https://asancpt.github.io/caffsim", + "topics": [ + "pharmacometrics", + "monte-carlo-simulation", + "medicine", + "caffeine", + "toxicology", + "pharmacokinetics" + ] }, { - "uid": "github/rchartra/NcCut", - "url": "https://github.com/rchartra/NcCut", - "rel": "/software/repository/github/rchartra/NcCut", - "avatar": "https://avatars.githubusercontent.com/u/113725205?v=4", - "description": "A GUI for visualizing and transecting 3D data.", + "uid": "github/brandonckelly/carma_pack", + "url": "https://github.com/brandonckelly/carma_pack", + "rel": "/software/repository/github/brandonckelly/carma_pack", + "avatar": "https://avatars.githubusercontent.com/u/3742948?v=4", + "description": "MCMC Sampler for Performing Bayesian Inference on Continuous Time Autoregressive Models.", "topics": [] }, { - "uid": "github/ymaan4/rficlean", - "url": "https://github.com/ymaan4/RFIClean", - "rel": "/software/repository/github/ymaan4/rficlean", - "avatar": "https://avatars.githubusercontent.com/u/7300480?v=4", - "description": "Mitigation of periodic as well as narrow-band and spiky/bursty RFI from time-domain filterbank data.", + "uid": "github/ECP-WarpX/WarpX", + "url": "https://github.com/ECP-WarpX/WarpX", + "rel": "/software/repository/github/ECP-WarpX/WarpX", + "avatar": "https://avatars.githubusercontent.com/u/32690356?v=4", + "description": "WarpX is an advanced, time-based electromagnetic & electrostatic Particle-In-Cell code.", "topics": [ - "rfi", - "filterbank-data", - "spiky", - "interference", - "interference-identification", - "interference-mitigation", - "interference-detection", - "interference-cancellation", - "pulsar", - "pulsars", - "fast-radio-bursts", - "neutron-star", - "time-domain-astronomy" + "laser", + "plasma", + "physics", + "gpu", + "simulation", + "particle-in-cell", + "pic", + "research" ] }, { - "uid": "github/FraunhoferIWES/foxes", - "url": "https://github.com/FraunhoferIWES/foxes", - "rel": "/software/repository/github/FraunhoferIWES/foxes", - "avatar": "https://avatars.githubusercontent.com/u/88376562?v=4", - "description": "Farm Optimization and eXtended yield Evaluation Software", + "uid": "github/glass-dev/glass", + "url": "https://github.com/glass-dev/glass", + "rel": "/software/repository/github/glass-dev/glass", + "avatar": "https://avatars.githubusercontent.com/u/88461024?v=4", + "description": "Generator for Large Scale Structure", "topics": [] }, { - "uid": "github/jasonyangshadow/lpmx", - "url": "https://github.com/JasonYangShadow/lpmx", - "rel": "/software/repository/github/jasonyangshadow/lpmx", - "avatar": "https://avatars.githubusercontent.com/u/2051711?v=4", - "description": "A novel composable rootless container system", + "uid": "github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", + "url": "https://github.com/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", + "rel": "/software/repository/github/bigraph-toolkit-suite/bigraphs.grgen-bigraphs", + "avatar": "https://avatars.githubusercontent.com/u/130669805?v=4", + "description": "BiGGer is a transformation tool and library that translates bigraphical models and rules to GrGen.NET-compatible files. It enables bigraph rewriting using GrGen.NET.", "topics": [ - "docker", - "rootless", - "rootless-container", - "container-linux", - "unionfs", - "fakeroot", - "fakechroot", - "docker-image", - "singularity" + "bigraphs", + "graph-rewriting", + "graph-rewriting-library", + "graph-transformation", + "grgen", + "grgen-net" ] }, { - "uid": "github/DLR-AMR/t8code", - "url": "https://github.com/DLR-AMR/t8code", - "rel": "/software/repository/github/DLR-AMR/t8code", - "avatar": "https://avatars.githubusercontent.com/u/109299884?v=4", - "description": "Parallel algorithms and data structures for tree-based adaptive mesh refinement (AMR) with arbitrary element shapes.", + "uid": "github/abmantz/lrgs", + "url": "https://github.com/abmantz/lrgs", + "rel": "/software/repository/github/abmantz/lrgs", + "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", + "description": "Code to perform multivariate linear regression using Gibbs sampling", "topics": [ - "high-performance-computing", - "adaptive-mesh-refinement", - "mesh", - "simulation", - "mpi", - "parallel", - "parallel-computing", - "hpc", - "modeling" + "linear-regression", + "multivariate-regression", + "gibbs-sampler" ] }, { - "uid": "github/seamplex/feenox", - "url": "https://github.com/seamplex/feenox", - "rel": "/software/repository/github/seamplex/feenox", - "avatar": "https://avatars.githubusercontent.com/u/47778967?v=4", - "description": "Cloud-first free no-fee no-X uniX-like finite-element(ish) computational engineering tool", + "uid": "github/abmantz/lmc", + "url": "https://github.com/abmantz/lmc", + "rel": "/software/repository/github/abmantz/lmc", + "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", + "description": "Logarithmantic Monte Carlo", "topics": [ - "finite-elements", - "hpc", - "numerical-methods", - "ode-solver", - "pde-solver" + "monte-carlo", + "python", + "sampler" ] }, { - "uid": "github/kreshuklab/plant-seg", - "url": "https://github.com/kreshuklab/plant-seg", - "rel": "/software/repository/github/kreshuklab/plant-seg", - "avatar": "https://avatars.githubusercontent.com/u/45267108?v=4", - "description": " A tool for cell instance aware segmentation in densely packed 3D volumetric images ", + "uid": "github/abmantz/rgw", + "url": "https://github.com/abmantz/rgw", + "rel": "/software/repository/github/abmantz/rgw", + "avatar": "https://avatars.githubusercontent.com/u/10962486?v=4", + "description": "A lightweight R-language implementation of the affine-invariant sampling method of Goodman & Weare (2010)", "topics": [ - "segmentation", - "deep-learning", - "bioinformatics", - "neural-network", - "bioimage-analysis", - "image-segmentation", - "unet" + "statistics", + "markov-chain-monte-carlo" ] }, { - "uid": "github/Yomguithereal/talisman", - "url": "https://github.com/Yomguithereal/talisman", - "rel": "/software/repository/github/Yomguithereal/talisman", - "avatar": "https://avatars1.githubusercontent.com/u/2571951?v=4", - "description": "Straightforward fuzzy matching, information retrieval and NLP building blocks for JavaScript.", + "uid": "github/kritiyer/AngioNet", + "url": "https://github.com/kritiyer/AngioNet", + "rel": "/software/repository/github/kritiyer/AngioNet", + "avatar": "https://avatars.githubusercontent.com/u/34351910?v=4", + "description": "Semantic segmentation network for X-ray angiography images, based on Deeplabv3+", + "topics": [] + }, + { + "uid": "github/mavrix93/LightCurvesClassifier", + "url": "https://github.com/mavrix93/LightCurvesClassifier", + "rel": "/software/repository/github/mavrix93/LightCurvesClassifier", + "avatar": "https://avatars.githubusercontent.com/u/17453516?v=4", + "description": "Package for machine learning of astronomical objects such as light curves", "topics": [ - "natural-language-processing", + "light-curves", + "star", + "database-connector", + "tuning-parameters", "machine-learning", - "fuzzy-matching", - "clustering", - "record-linkage", - "information-retrieval", - "deduplication" + "django", + "classification", + "feature-extraction" ] }, { - "uid": "github/Pizzuti92/MG-MAMPOSSt", - "url": "https://github.com/Pizzuti92/MG-MAMPOSSt", - "rel": "/software/repository/github/Pizzuti92/MG-MAMPOSSt", - "avatar": "https://avatars.githubusercontent.com/u/80061006?v=4", - "description": "MG-MAMPOSSt is a FORTRAN code that extended the MAMPOSSt algorithm of G. Mamon, A. Biviano and G. Bou\u00e9, that performs Bayesian fits of models of mass and velocity anisotropy profiles to the distribution of tracers in projected phase space, to handle modified gravity models and constrain its parameters. The new version implements two distinct types of gravity modifications, namely general chameleon (including $f(\\mathcal{R})$ models) and beyond Horndeski gravity (Vainshtein screening).", + "uid": "github/rnikutta/rhocube", + "url": "https://github.com/rnikutta/rhocube", + "rel": "/software/repository/github/rnikutta/rhocube", + "avatar": "https://avatars.githubusercontent.com/u/7537690?v=4", + "description": "Compute 3D density models, and integrate over dz if requested", "topics": [] }, { - "uid": "github/AngusWright/LAMBDAR", - "url": "https://github.com/AngusWright/LAMBDAR", - "rel": "/software/repository/github/AngusWright/LAMBDAR", - "avatar": "https://avatars.githubusercontent.com/u/5625880?v=4", - "description": "LAMBDAR: Lambda Adaptive Multi-Band Deblending Algorithm in R", + "uid": "github/soundata/soundata", + "url": "https://github.com/soundata/soundata", + "rel": "/software/repository/github/soundata/soundata", + "avatar": "https://avatars.githubusercontent.com/u/73146954?v=4", + "description": "Python library for downloading, loading & working with sound datasets", + "topics": [ + "audio", + "python", + "dataset", + "environmental-sound", + "bioacoustics", + "urban-sound" + ] + }, + { + "uid": "github/Rocsg/FijiRelax", + "url": "https://github.com/Rocsg/FijiRelax", + "rel": "/software/repository/github/Rocsg/FijiRelax", + "avatar": "https://avatars.githubusercontent.com/u/24812704?v=4", + "description": "FijiRelax: 3D+t multi-echo spin-echo sequences MRI analysis", + "topics": [ + "image-processing", + "imagej", + "imagej-plugins", + "java", + "modeling", + "mri", + "relaxation-time" + ] + }, + { + "uid": "github/TARGENE/TMLE.jl", + "url": "https://github.com/TARGENE/TMLE.jl", + "rel": "/software/repository/github/TARGENE/TMLE.jl", + "avatar": "https://avatars.githubusercontent.com/u/103381328?v=4", + "description": "A Julia implementation of the Targeted Minimum Loss-based Estimation", + "topics": [ + "julia", + "machine-learning", + "statistics", + "tmle", + "targeted-learning", + "non-parametric-statistics", + "causal-inference", + "double-robust" + ] + }, + { + "uid": "github/liulei/volks2", + "url": "https://github.com/liulei/volks2", + "rel": "/software/repository/github/liulei/volks2", + "avatar": "https://avatars.githubusercontent.com/u/95010?v=4", + "description": "VLBI Observation for single pulse Localization Keen Searcher, 2nd release", "topics": [] }, { - "uid": "github/Pas-Kapli/mptp", - "url": "https://github.com/Pas-Kapli/mptp", - "rel": "/software/repository/github/Pas-Kapli/mptp", - "avatar": "https://avatars.githubusercontent.com/u/9498483?v=4", - "description": "mPTP - a tool for single-locus species delimitation", + "uid": "github/davek44/Glimmer-MG", + "url": "https://github.com/davek44/Glimmer-MG", + "rel": "/software/repository/github/davek44/Glimmer-MG", + "avatar": "https://avatars.githubusercontent.com/u/172688?v=4", + "description": "Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering", "topics": [] }, { - "uid": "github/ntlucia/BrownDwarf-SpectralIndices", - "url": "https://github.com/ntlucia/BrownDwarf-SpectralIndices", - "rel": "/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", - "avatar": "https://avatars.githubusercontent.com/u/26672990?v=4", - "description": "Method to determine if a brown dwarf is a candidate to be a photometric variable or not, by means of the study of spectral indices.", + "uid": "github/myinxd/mcrgnet", + "url": "https://github.com/myinxd/MCRGNet", + "rel": "/software/repository/github/myinxd/mcrgnet", + "avatar": "https://avatars.githubusercontent.com/u/11346940?v=4", + "description": "Morphological Classification of Radio Galaxy Network", "topics": [] }, { - "uid": "github/astrosupriyo/pyTANSPEC", - "url": "https://github.com/astrosupriyo/pyTANSPEC", - "rel": "/software/repository/github/astrosupriyo/pyTANSPEC", - "avatar": "https://avatars.githubusercontent.com/u/29644902?v=4", - "description": "Python tool for extracting 1D TANSPEC spectra from 2D image", + "uid": "github/AKHughes1994/polkat", + "url": "https://github.com/AKHughes1994/polkat", + "rel": "/software/repository/github/AKHughes1994/polkat", + "avatar": "https://avatars.githubusercontent.com/u/49698839?v=4", + "description": "Repository of tools and scripts for short track (full polarisation) calibration and imaging with MeerKAT (and possibly other linear-feed interferometers). Devloped as a part of the X-KAT collaboration. ", "topics": [] }, { - "uid": "github/tvh0021/aweSOM", - "url": "https://github.com/tvh0021/aweSOM", - "rel": "/software/repository/github/tvh0021/aweSOM", - "avatar": "https://avatars.githubusercontent.com/u/72711330?v=4", - "description": "Accelerated Self-organizing Map (SOM) and Statistically Combined Ensemble (SCE)", + "uid": "github/ester-project/ester", + "url": "https://github.com/ester-project/ester", + "rel": "/software/repository/github/ester-project/ester", + "avatar": "https://avatars.githubusercontent.com/u/9047981?v=4", + "description": "Evolution STEllaire en Rotation.", "topics": [] }, { - "uid": "github/simonprovost/scikit-longitudinal", - "url": "https://github.com/simonprovost/scikit-longitudinal", - "rel": "/software/repository/github/simonprovost/scikit-longitudinal", - "avatar": "https://avatars.githubusercontent.com/u/32747568?v=4", - "description": "\u2602\ufe0f Scikit-longitudinal (Sklong) is an open-source Python library & Scikit-Learn API compliant, tailored to longitudinal machine learning classification tasks. It is ideal for researchers, data scientists, and analysts, as it provides specialist tools for dealing with repeated-measures data challenges ", + "uid": "github/OnroerendErfgoed/atramhasis", + "url": "https://github.com/OnroerendErfgoed/atramhasis", + "rel": "/software/repository/github/OnroerendErfgoed/atramhasis", + "avatar": "https://avatars.githubusercontent.com/u/1157802?v=4", + "description": "An online SKOS editor", "topics": [ - "classification", - "longitudinal", - "machine-learning", - "repeated-measurements", - "supervised-learning", - "longitudinal-classification", - "scikit-learn", - "longitudinal-data", - "longitudinal-studies" + "skos", + "python", + "thesaurus", + "vocabulary", + "pypi-package" ] }, { - "uid": "github/OrlandoLam/SAMT", - "url": "https://github.com/OrlandoLam/SAMT", - "rel": "/software/repository/github/OrlandoLam/SAMT", - "avatar": "https://avatars.githubusercontent.com/u/67990560?v=4", - "description": "South Australian Macrobenthic Traits database ", + "uid": "github/mmahmoudian/sivs", + "url": "https://github.com/mmahmoudian/sivs", + "rel": "/software/repository/github/mmahmoudian/sivs", + "avatar": "https://avatars.githubusercontent.com/u/390889?v=4", + "description": "An iterative feature selection method that internally utilizes varius Machine Learning methods that have embeded feature reduction in order to shrink down the feature space into a small and yet robust set.", "topics": [] }, { - "uid": "github/Quantum-Dynamics-Hub/libra-code", - "url": "https://github.com/Quantum-Dynamics-Hub/libra-code", - "rel": "/software/repository/github/Quantum-Dynamics-Hub/libra-code", - "avatar": "https://avatars.githubusercontent.com/u/27871906?v=4", - "description": null, - "topics": [ - "nonadiabatic", - "quantum", - "quantum-chemistry", - "dynamics", - "molecular-dynamics", - "do-it-yourself", - "library", - "methodology-development", - "electronic-structure", - "semiempirical-methods", - "atomic-orbitals", - "object-oriented", - "utilities" - ] - }, - { - "uid": "github/cthoyt/bel-resources", - "url": "https://github.com/pybel/bel-resources", - "rel": "/software/repository/github/cthoyt/bel-resources", - "avatar": "https://avatars.githubusercontent.com/u/22892058?v=4", - "description": "Utilities for BEL resource files.", - "topics": [ - "biological-expression-language", - "ontologies", - "terminologies" - ] + "uid": "github/catherinezucker/radfil", + "url": "https://github.com/catherinezucker/radfil", + "rel": "/software/repository/github/catherinezucker/radfil", + "avatar": "https://avatars.githubusercontent.com/u/18339657?v=4", + "description": "Building Radial Density Profiles for Interstellar Filaments", + "topics": [] }, { - "uid": "github/arshajii/ema", - "url": "https://github.com/arshajii/ema", - "rel": "/software/repository/github/arshajii/ema", - "avatar": "https://avatars.githubusercontent.com/u/2407176?v=4", - "description": "Fast & accurate alignment of barcoded short-reads", + "uid": "github/GEUS-Glaciology-and-Climate/GrIML", + "url": "https://github.com/GEUS-Glaciology-and-Climate/GrIML", + "rel": "/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", + "avatar": "https://avatars.githubusercontent.com/u/71171316?v=4", + "description": "Remote sensing classification of ice marginal lakes", "topics": [ - "bioinformatics", - "sequence-alignment" + "esa", + "remote-sensing", + "glacial-lakes", + "satellite-imagery", + "glofs", + "ice-marginal-lakes", + "cryosphere" ] }, { - "uid": "github/privong/pyMCspearman", - "url": "https://github.com/privong/pyMCSpearman", - "rel": "/software/repository/github/privong/pyMCspearman", - "avatar": "https://avatars.githubusercontent.com/u/1630295?v=4", - "description": "Monte carlo calculation of Spearman's rank correlation coefficient with uncertainties. Following Curran (2014)", + "uid": "github/GEUS-Glaciology-and-Climate/pypromice", + "url": "https://github.com/GEUS-Glaciology-and-Climate/pypromice", + "rel": "/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", + "avatar": "https://avatars.githubusercontent.com/u/71171316?v=4", + "description": "Process AWS data from L0 (raw logger) through Lx (end user)", "topics": [ - "spearman-rho", - "bootstrapping-statistics", - "monte-carlo" + "greenland", + "weather", + "weather-station" ] }, { - "uid": "github/privong/pymccorrelation", - "url": "https://github.com/privong/pymccorrelation", - "rel": "/software/repository/github/privong/pymccorrelation", - "avatar": "https://avatars.githubusercontent.com/u/1630295?v=4", - "description": "Correlation coefficients with uncertainties", - "topics": [ - "bootstrapping-statistics", - "monte-carlo", - "correlation-coefficient" - ] + "uid": "github/IanHeywood/pony3d", + "url": "https://github.com/IanHeywood/pony3d", + "rel": "/software/repository/github/IanHeywood/pony3d", + "avatar": "https://avatars.githubusercontent.com/u/6533799?v=4", + "description": null, + "topics": [] }, { - "uid": "github/ratt-ru/Stimela-classic", - "url": "https://github.com/ratt-ru/Stimela-classic", - "rel": "/software/repository/github/ratt-ru/Stimela-classic", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Containerized radio interferometry scripting framework -- NB: Classic version is no longer in active development, use stimela 2! See README for details.", - "topics": [ - "pipelines", - "astronomical-algorithms", - "workflow-management" - ] + "uid": "github/IanHeywood/oxkat", + "url": "https://github.com/IanHeywood/oxkat", + "rel": "/software/repository/github/IanHeywood/oxkat", + "avatar": "https://avatars.githubusercontent.com/u/6533799?v=4", + "description": "MeerKAT calibration and imaging scripts", + "topics": [] }, { - "uid": "github/ratt-ru/eidos", - "url": "https://github.com/ratt-ru/eidos", - "rel": "/software/repository/github/ratt-ru/eidos", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Modelling primary beams of radio astronomy antennas", + "uid": "github/wilkelab/Opfi", + "url": "https://github.com/wilkelab/Opfi", + "rel": "/software/repository/github/wilkelab/Opfi", + "avatar": "https://avatars.githubusercontent.com/u/7905759?v=4", + "description": "A Python package for discovery, annotation, and analysis of gene clusters in genomics or metagenomics data sets.", "topics": [] }, { - "uid": "github/ratt-ru/Stimela", - "url": "https://github.com/ratt-ru/Stimela", - "rel": "/software/repository/github/ratt-ru/Stimela", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "A containerized radio interferometry scripting framework", + "uid": "github/MDAnalysis/mdanalysis", + "url": "https://github.com/MDAnalysis/mdanalysis", + "rel": "/software/repository/github/MDAnalysis/mdanalysis", + "avatar": "https://avatars1.githubusercontent.com/u/11445951?v=4", + "description": "MDAnalysis is a Python library to analyze molecular dynamics trajectories.", "topics": [ - "pipelines", - "astronomical-algorithms", - "workflow-management" + "molecular-dynamics", + "python", + "science", + "trajectory-analysis", + "molecular-simulation", + "molecular-dynamics-simulation", + "mdanalysis", + "computational-chemistry" ] }, { - "uid": "github/ratt-ru/QuartiCal", - "url": "https://github.com/ratt-ru/QuartiCal", - "rel": "/software/repository/github/ratt-ru/QuartiCal", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "CubiCal, but with greater power.", + "uid": "github/mourisl/Lighter", + "url": "https://github.com/mourisl/Lighter", + "rel": "/software/repository/github/mourisl/Lighter", + "avatar": "https://avatars.githubusercontent.com/u/1904147?v=4", + "description": "Fast and memory-efficient sequencing error corrector", "topics": [] }, { - "uid": "github/ratt-ru/solarkat", - "url": "https://github.com/ratt-ru/solarkat", - "rel": "/software/repository/github/ratt-ru/solarkat", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "MeerKAT as a solar telescope", + "uid": "github/Chroma-CITI/namosim", + "url": "https://github.com/Chroma-CITI/namosim", + "rel": "/software/repository/github/Chroma-CITI/namosim", + "avatar": "https://avatars.githubusercontent.com/u/160138468?v=4", + "description": "A mobile-robot navigation planner for navigating among movable obstacles", "topics": [] }, { - "uid": "github/ratt-ru/montblanc", - "url": "https://github.com/ratt-ru/montblanc", - "rel": "/software/repository/github/ratt-ru/montblanc", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "GPU-accelerated RIME implementations. An offshoot of the BIRO projects, and one of the foothills of Mt Exaflop.", + "uid": "github/MetazoaPhylogenomicsLab/FANTASIA", + "url": "https://github.com/MetazoaPhylogenomicsLab/FANTASIA", + "rel": "/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", + "avatar": "https://avatars.githubusercontent.com/u/62691665?v=4", + "description": null, "topics": [] }, { - "uid": "github/ratt-ru/dask-ms", - "url": "https://github.com/ratt-ru/dask-ms", - "rel": "/software/repository/github/ratt-ru/dask-ms", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Implementation of a dask/xarray dataset backed by a CASA MS", - "topics": [ - "dask", - "casacore", - "radio-astronomy", - "xarray" - ] - }, - { - "uid": "github/ratt-ru/breizorro", - "url": "https://github.com/ratt-ru/breizorro", - "rel": "/software/repository/github/ratt-ru/breizorro", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Image masking tool(s) possibly of Breton spiritual origin", + "uid": "github/mbursa/disk-models", + "url": "https://github.com/mbursa/disk-models", + "rel": "/software/repository/github/mbursa/disk-models", + "avatar": "https://avatars.githubusercontent.com/u/10572860?v=4", + "description": "Accretion disk radial structure models", "topics": [] }, { - "uid": "github/ratt-ru/codex-africanus", - "url": "https://github.com/ratt-ru/codex-africanus", - "rel": "/software/repository/github/ratt-ru/codex-africanus", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Radio Astronomy Algorithms Library", - "topics": [ - "radio-astronomy", - "python", - "numba", - "dask" - ] + "uid": "github/mbursa/sim5", + "url": "https://github.com/mbursa/sim5", + "rel": "/software/repository/github/mbursa/sim5", + "avatar": "https://avatars.githubusercontent.com/u/10572860?v=4", + "description": "Library for ray-tracing and radiation transport in general relativity", + "topics": [] }, { - "uid": "github/ratt-ru/CubiCal", - "url": "https://github.com/ratt-ru/CubiCal", - "rel": "/software/repository/github/ratt-ru/CubiCal", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "A fast radio interferometric calibration suite.", + "uid": "github/davidhoksza/traveler", + "url": "https://github.com/cusbg/traveler", + "rel": "/software/repository/github/davidhoksza/traveler", + "avatar": "https://avatars1.githubusercontent.com/u/73171224?v=4", + "description": "Template-based RNA secondary structure visualization", "topics": [] }, { - "uid": "github/ratt-ru/rodrigues", - "url": "https://github.com/ratt-ru/rodrigues", - "rel": "/software/repository/github/ratt-ru/rodrigues", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "web based radio telescope calibration simulation", + "uid": "github/davidhoksza/MolArt", + "url": "https://github.com/cusbg/MolArt", + "rel": "/software/repository/github/davidhoksza/MolArt", + "avatar": "https://avatars1.githubusercontent.com/u/73171224?v=4", + "description": "MOLeculAR structure annoTator", "topics": [] }, { - "uid": "github/ratt-ru/PyMORESANE", - "url": "https://github.com/ratt-ru/PyMORESANE", - "rel": "/software/repository/github/ratt-ru/PyMORESANE", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Repository for the Python version of the MORESANE deconvolution algorithm", + "uid": "github/biocore/deblur", + "url": "https://github.com/biocore/deblur", + "rel": "/software/repository/github/biocore/deblur", + "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", + "description": "Deblur is a greedy deconvolution algorithm based on known read error profiles.", "topics": [] }, { - "uid": "github/ratt-ru/smops", - "url": "https://github.com/ratt-ru/smops", - "rel": "/software/repository/github/ratt-ru/smops", - "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", - "description": "Interpolate FITS model images over higher frequency intervals", + "uid": "github/biocore/unifrac-binaries", + "url": "https://github.com/biocore/unifrac-binaries", + "rel": "/software/repository/github/biocore/unifrac-binaries", + "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", + "description": "Fast phylogenetic diversity calculations", "topics": [] }, { - "uid": "github/10XGenomics/bamtofastq", - "url": "https://github.com/10XGenomics/bamtofastq", - "rel": "/software/repository/github/10XGenomics/bamtofastq", - "avatar": "https://avatars.githubusercontent.com/u/9890104?v=4", - "description": "Convert 10x BAM files to the original FASTQs compatible with 10x pipelines", + "uid": "github/biocore/scikit-bio", + "url": "https://github.com/biocore/scikit-bio", + "rel": "/software/repository/github/biocore/scikit-bio", + "avatar": "https://avatars3.githubusercontent.com/u/6241857?v=4", + "description": "scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.", "topics": [] }, { - "uid": "github/Exo-MerCat/Exo-MerCat", - "url": "https://github.com/Exo-MerCat/Exo-MerCat", - "rel": "/software/repository/github/Exo-MerCat/Exo-MerCat", - "avatar": "https://avatars.githubusercontent.com/u/116747501?v=4", - "description": "Exoplanet Merged Catalog", + "uid": "github/biocore/unifrac", + "url": "https://github.com/biocore/unifrac", + "rel": "/software/repository/github/biocore/unifrac", + "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", + "description": "high-performance phylogenetic diversity calculations (dev)", "topics": [] }, { - "uid": "github/traja-team/traja", - "url": "https://github.com/traja-team/traja", - "rel": "/software/repository/github/traja-team/traja", - "avatar": "https://avatars.githubusercontent.com/u/60182006?v=4", - "description": "Python tools for spatial trajectory and time-series data analysis", + "uid": "github/biocore/emperor", + "url": "https://github.com/biocore/emperor", + "rel": "/software/repository/github/biocore/emperor", + "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", + "description": "Emperor a tool for the analysis and visualization of large microbial ecology datasets", "topics": [ - "time-series-analysis", - "animal-behavior", - "trajectory-analysis", + "microbiome", + "visualization", + "emperor", "python", - "spatial-data-analysis" + "bioinformatics", + "ordination", + "biplots" ] }, { - "uid": "github/glenco/lensed", - "url": "https://github.com/glenco/lensed", - "rel": "/software/repository/github/glenco/lensed", - "avatar": "https://avatars.githubusercontent.com/u/10499259?v=4", - "description": "forward reconstruction of lenses and sources from strong lensing observations", + "uid": "github/biocore/sortmerna", + "url": "https://github.com/biocore/sortmerna", + "rel": "/software/repository/github/biocore/sortmerna", + "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", + "description": "SortMeRNA: next-generation sequence filtering and alignment tool", "topics": [ - "astronomy", - "gravitational-lensing", - "astrophysics", - "opencl", - "gpgpu" + "cpp", + "python", + "alignment", + "bioinformatics" ] }, { - "uid": "github/pwry/lextes", - "url": "https://github.com/pwry/lextes", - "rel": "/software/repository/github/pwry/lextes", - "avatar": "https://avatars.githubusercontent.com/u/31188957?v=4", - "description": "PDF link scraper/tester for Schroedinger's Code paper", + "uid": "github/matthiaslee/Xmatch", + "url": "https://github.com/matthiaslee/Xmatch", + "rel": "/software/repository/github/matthiaslee/Xmatch", + "avatar": "https://avatars.githubusercontent.com/u/1522304?v=4", + "description": "a GPU accelerated astronomic catalog cross-matching tool", "topics": [] }, { - "uid": "github/CityU-AIM-Group/HTD", - "url": "https://github.com/CityU-AIM-Group/HTD", - "rel": "/software/repository/github/CityU-AIM-Group/HTD", - "avatar": "https://avatars.githubusercontent.com/u/81352317?v=4", - "description": "[TIP' 21] HTD: Heterogeneous Task Decoupling for Two-stage Object Detection", - "topics": [ - "object-detection", - "faster-rcnn", - "graph", - "mmdetection" - ] - }, - { - "uid": "github/Wenxin-Wan/ephor_wp4_method_tutorial", - "url": "https://github.com/Wenxin-Wan/ephor_wp4_method_tutorial", - "rel": "/software/repository/github/Wenxin-Wan/ephor_wp4_method_tutorial", - "avatar": "https://avatars.githubusercontent.com/u/61091897?v=4", + "uid": "github/ageorgakakis/StructureFunction", + "url": "https://github.com/ageorgakakis/StructureFunction", + "rel": "/software/repository/github/ageorgakakis/StructureFunction", + "avatar": "https://avatars.githubusercontent.com/u/17427270?v=4", "description": null, "topics": [] }, { - "uid": "github/neslusan/BELTCROSS2", - "url": "https://github.com/neslusan/BELTCROSS2", - "rel": "/software/repository/github/neslusan/BELTCROSS2", - "avatar": "https://avatars.githubusercontent.com/u/151740424?v=4", - "description": "A computer program calculating the closest approaches of asteroid to the mean orbits of meteoroid streams, new version upploaded on January 15, 2024.", - "topics": [] - }, - { - "uid": "github/Martinsos/edlib", - "url": "https://github.com/Martinsos/edlib", - "rel": "/software/repository/github/Martinsos/edlib", - "avatar": "https://avatars.githubusercontent.com/u/1536647?v=4", - "description": "Lightweight, super fast C/C++ (& Python) library for sequence alignment using edit (Levenshtein) distance.", + "uid": "github/cnellington/Contextualized", + "url": "https://github.com/cnellington/Contextualized", + "rel": "/software/repository/github/cnellington/Contextualized", + "avatar": "https://avatars.githubusercontent.com/u/13963825?v=4", + "description": "An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.", "topics": [ - "sequence-alignment", - "edit-distance", - "levehnstein-distance", - "library", - "c-plus-plus", - "alignment-path", - "python", - "bioinformatics" + "machine-learning", + "statistics", + "bioinformatics", + "medical-informatics" ] }, { - "uid": "github/UAMCAntwerpen/LEADD", - "url": "https://github.com/UAMCAntwerpen/LEADD", - "rel": "/software/repository/github/UAMCAntwerpen/LEADD", - "avatar": "https://avatars.githubusercontent.com/u/22612279?v=4", - "description": "Lamarckian Evolutionary Algorithm for de novo Drug Design", + "uid": "github/solids4foam/solids4foam", + "url": "https://github.com/solids4foam/solids4foam", + "rel": "/software/repository/github/solids4foam/solids4foam", + "avatar": "https://avatars.githubusercontent.com/u/110133789?v=4", + "description": "The official repository for solids4foam", "topics": [] }, { - "uid": "github/kimberg/voxbo", - "url": "https://github.com/kimberg/voxbo", - "rel": "/software/repository/github/kimberg/voxbo", - "avatar": "https://avatars.githubusercontent.com/u/754848?v=4", - "description": "free software for brain image analysis", + "uid": "github/matteolucchini1/BHJet", + "url": "https://github.com/matteolucchini1/BHJet", + "rel": "/software/repository/github/matteolucchini1/BHJet", + "avatar": "https://avatars.githubusercontent.com/u/35686549?v=4", + "description": "Semi analytical black hole jet model, jetset group, Amsterdam", "topics": [] }, { - "uid": "github/szhorvat/IGraphM", - "url": "https://github.com/szhorvat/IGraphM", - "rel": "/software/repository/github/szhorvat/IGraphM", - "avatar": "https://avatars.githubusercontent.com/u/1212871?v=4", - "description": "IGraph/M is the igraph interface for Mathematica", + "uid": "github/maps-as-data/MapReader", + "url": "https://github.com/maps-as-data/MapReader", + "rel": "/software/repository/github/maps-as-data/MapReader", + "avatar": "https://avatars.githubusercontent.com/u/179117192?v=4", + "description": "A computer vision pipeline for exploring and analyzing images at scale", "topics": [ - "igraph", - "mathematica", - "mathematics", - "network-graph", - "graph-theory", - "raspberry-pi", - "network-analysis", - "graph-algorithms", - "wolfram-language" + "hut23", + "hut23-96", + "computer-vision", + "deep-learning", + "machine-learning", + "pytorch", + "article", + "digital-humanities", + "maps", + "spatial-data" ] }, { - "uid": "github/IDEMSInternational/ExcelToShiny", - "url": "https://github.com/IDEMSInternational/ExcelToShiny", - "rel": "/software/repository/github/IDEMSInternational/ExcelToShiny", - "avatar": "https://avatars.githubusercontent.com/u/44813009?v=4", - "description": "A system for creating Shiny dashboards using Excel spreadsheets", + "uid": "github/aobr/gsf", + "url": "https://github.com/aobr/gsf", + "rel": "/software/repository/github/aobr/gsf", + "avatar": "https://avatars.githubusercontent.com/u/7265091?v=4", + "description": "galactic structure finder", "topics": [] }, { - "uid": "github/xmuyulab/DreamDIA-XMBD", - "url": "https://github.com/xmuyulab/DreamDIA-XMBD", - "rel": "/software/repository/github/xmuyulab/DreamDIA-XMBD", - "avatar": "https://avatars.githubusercontent.com/u/36484498?v=4", - "description": "Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.", + "uid": "github/NKI-CCB/PRECISE", + "url": "https://github.com/NKI-CCB/PRECISE", + "rel": "/software/repository/github/NKI-CCB/PRECISE", + "avatar": "https://avatars1.githubusercontent.com/u/22322765?v=4", + "description": null, "topics": [] }, { - "uid": "github/maxbernyk/lightcone", - "url": "https://github.com/maxbernyk/lightcone", - "rel": "/software/repository/github/maxbernyk/lightcone", - "avatar": "https://avatars.githubusercontent.com/u/4667838?v=4", - "description": "light-cone generating script", + "uid": "github/mtakahiro/gsf", + "url": "https://github.com/mtakahiro/gsf", + "rel": "/software/repository/github/mtakahiro/gsf", + "avatar": "https://avatars.githubusercontent.com/u/15098413?v=4", + "description": "Grism SED Fitting package", "topics": [] }, { - "uid": "github/vaexio/vaex", - "url": "https://github.com/vaexio/vaex", - "rel": "/software/repository/github/vaexio/vaex", - "avatar": "https://avatars.githubusercontent.com/u/45720408?v=4", - "description": "Out-of-Core hybrid Apache Arrow/NumPy DataFrame for Python, ML, visualization and exploration of big tabular data at a billion rows per second \ud83d\ude80", + "uid": "github/mtakahiro/bbpn", + "url": "https://github.com/mtakahiro/bbpn", + "rel": "/software/repository/github/mtakahiro/bbpn", + "avatar": "https://avatars.githubusercontent.com/u/15098413?v=4", + "description": "Bye Bye Pink Noise", + "topics": [] + }, + { + "uid": "github/4pisky/fourpisky-core", + "url": "https://github.com/4pisky/fourpisky-core", + "rel": "/software/repository/github/4pisky/fourpisky-core", + "avatar": "https://avatars.githubusercontent.com/u/13047807?v=4", + "description": "Core code defining alert handling, etc for the 4PiSky voevent hub.", "topics": [ - "dataframe", - "python", - "bigdata", - "tabular-data", - "visualization", - "memory-mapped-file", - "hdf5", - "machine-learning", - "machinelearning" + "voevent", + "transient-astronomy" ] }, { - "uid": "github/ericagol/TTVFaster", - "url": "https://github.com/ericagol/TTVFaster", - "rel": "/software/repository/github/ericagol/TTVFaster", - "avatar": "https://avatars.githubusercontent.com/u/243664?v=4", - "description": "First order eccentricity transit timing variations computed in Agol & Deck (2015)", + "uid": "github/SophieMLV/axionHMcode", + "url": "https://github.com/SophieMLV/axionHMcode", + "rel": "/software/repository/github/SophieMLV/axionHMcode", + "avatar": "https://avatars.githubusercontent.com/u/79702672?v=4", + "description": "A fully expanded halo model to calculate the non-linear power spectrum in a mixed dark matter cosmology with ultra-light axions", "topics": [] }, { - "uid": "github/ericagol/NbodyGradient.jl", - "url": "https://github.com/ericagol/NbodyGradient.jl", - "rel": "/software/repository/github/ericagol/NbodyGradient.jl", - "avatar": "https://avatars.githubusercontent.com/u/243664?v=4", - "description": "N-body integrator computes derivatives with respect to initial conditions for TTVs, RV, Photodynamics & more", + "uid": "github/CompNet/Renard", + "url": "https://github.com/CompNet/Renard", + "rel": "/software/repository/github/CompNet/Renard", + "avatar": "https://avatars.githubusercontent.com/u/1487813?v=4", + "description": "Relationships Extraction from NARrative Documents", + "topics": [ + "character-networks", + "coreference-resolution", + "ner", + "network-extraction", + "novels", + "speaker-attribution", + "alias-resolution" + ] + }, + { + "uid": "github/BorgwardtLab/simbsig", + "url": "https://github.com/BorgwardtLab/simbsig", + "rel": "/software/repository/github/BorgwardtLab/simbsig", + "avatar": "https://avatars.githubusercontent.com/u/15212542?v=4", + "description": "The official implementation for the SIMBSIG package", "topics": [] }, { - "uid": "github/r-lib/gert", - "url": "https://github.com/r-lib/gert", - "rel": "/software/repository/github/r-lib/gert", - "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", - "description": "Simple git client for R", + "uid": "github/devnums/pyheartlib", + "url": "https://github.com/devnums/pyheartlib", + "rel": "/software/repository/github/devnums/pyheartlib", + "avatar": "https://avatars.githubusercontent.com/u/12469296?v=4", + "description": "A Python package for processing electrocardiogram signals \u2764\ufe0f", "topics": [ - "scalereprod" + "ecg", + "electrocardiogram", + "machine-learning" ] }, { - "uid": "github/r-lib/credentials", - "url": "https://github.com/r-lib/credentials", - "rel": "/software/repository/github/r-lib/credentials", - "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", - "description": "Tools for Managing SSH and Git Credentials", + "uid": "github/anderslogg/geco", + "url": "https://github.com/anderslogg/geco", + "rel": "/software/repository/github/anderslogg/geco", + "avatar": "https://avatars.githubusercontent.com/u/125354137?v=4", + "description": "A collection of solvers for the Einstein-Vlasov equations", "topics": [ - "scalereprod" + "axisymmetric", + "einstein-vlasov", + "fem", + "fenics", + "general-relativity", + "vlasov-poisson" ] }, { - "uid": "github/r-lib/lintr", - "url": "https://github.com/r-lib/lintr", - "rel": "/software/repository/github/r-lib/lintr", - "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", - "description": "Static Code Analysis for R", + "uid": "github/rorybarnes/EqTide", + "url": "https://github.com/RoryBarnes/EqTide", + "rel": "/software/repository/github/rorybarnes/EqTide", + "avatar": "https://avatars.githubusercontent.com/u/4413842?v=4", + "description": "Source code for Equilibrium Tide calculations", "topics": [ - "linter", - "r" + "tides", + "orbits", + "planets", + "moons", + "exoplanets" ] }, { - "uid": "github/achaikova/frbmclust", - "url": "https://github.com/achaikova/frbmclust", - "rel": "/software/repository/github/achaikova/frbmclust", - "avatar": "https://avatars.githubusercontent.com/u/57727520?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/Mat-dp/mat-dp-core", - "url": "https://github.com/Mat-dp/mat-dp-core", - "rel": "/software/repository/github/Mat-dp/mat-dp-core", - "avatar": "https://avatars.githubusercontent.com/u/104203060?v=4", - "description": "Mat-dp core cotains the key methods used in the broader Mat-dp model. Mat-dp aims to deliver user-friendly and open-access software to study the environmental implications of materials used for building low-carbon systems.", + "uid": "github/kcleal/gw", + "url": "https://github.com/kcleal/gw", + "rel": "/software/repository/github/kcleal/gw", + "avatar": "https://avatars.githubusercontent.com/u/42997789?v=4", + "description": "Genome browser and variant annotation", "topics": [ - "modelling-tool", - "bulk-materials", - "critical-materials", - "embodied-emissions", - "low-carbon-systems", - "material-demand" + "annotation-tool", + "vcf", + "bam-files", + "cram-files", + "genome-browser" ] }, { - "uid": "github/anugrahjo/PySLSQP", - "url": "https://github.com/anugrahjo/PySLSQP", - "rel": "/software/repository/github/anugrahjo/PySLSQP", - "avatar": "https://avatars.githubusercontent.com/u/44123535?v=4", - "description": "A transparent Python interface to the SLSQP optimization algorithm, with advanced features and visualization capabilities.", + "uid": "github/kcleal/dysgu", + "url": "https://github.com/kcleal/dysgu", + "rel": "/software/repository/github/kcleal/dysgu", + "avatar": "https://avatars.githubusercontent.com/u/42997789?v=4", + "description": "Toolkit for calling structural variants using short or long reads", "topics": [ - "nonlinear-optimization", - "optimization", - "optimization-algorithms", - "slsqp" + "genomics", + "bioinformatics", + "structural-variation", + "variant-calling", + "paired-end", + "long-read", + "structural", + "variant" ] }, { - "uid": "github/underworldcode/underworld3", - "url": "https://github.com/underworldcode/underworld3", - "rel": "/software/repository/github/underworldcode/underworld3", - "avatar": "https://avatars.githubusercontent.com/u/14074661?v=4", - "description": "Underworld v3", + "uid": "github/chenjj2/forecaster", + "url": "https://github.com/chenjj2/forecaster", + "rel": "/software/repository/github/chenjj2/forecaster", + "avatar": "https://avatars.githubusercontent.com/u/7421301?v=4", + "description": null, "topics": [] }, { - "uid": "github/healytwin1/HISS", - "url": "https://github.com/healytwin1/HISS", - "rel": "/software/repository/github/healytwin1/HISS", - "avatar": "https://avatars.githubusercontent.com/u/11073757?v=4", - "description": "HI Stacking Software", + "uid": "github/PlanetHunters/tkmatrix", + "url": "https://github.com/PlanetHunters/tkmatrix", + "rel": "/software/repository/github/PlanetHunters/tkmatrix", + "avatar": "https://avatars.githubusercontent.com/u/78312991?v=4", + "description": "Transits Inject and Recovery Multi-phase Analysis", "topics": [] }, { - "uid": "github/stevengiacalone/triceratops", - "url": "https://github.com/stevengiacalone/triceratops", - "rel": "/software/repository/github/stevengiacalone/triceratops", - "avatar": "https://avatars.githubusercontent.com/u/35981550?v=4", - "description": "Tool for Rating Interesting Candidate Exoplanets and Reliability Analysis of Transits Originating from Proximate Stars", + "uid": "github/PlanetHunters/watson", + "url": "https://github.com/PlanetHunters/watson", + "rel": "/software/repository/github/PlanetHunters/watson", + "avatar": "https://avatars.githubusercontent.com/u/78312991?v=4", + "description": "Visual Vetting and Analysis of Transits of Space ObservatioNs", "topics": [ - "astronomy", - "astrophysics", - "astrophysical-signals", "exoplanets", - "exoplanet-transits", - "statistical-analysis" + "tess", + "kepler", + "k2", + "pipeline", + "transits" ] }, { - "uid": "github/matvii/ADAM", - "url": "https://github.com/matvii/ADAM", - "rel": "/software/repository/github/matvii/ADAM", - "avatar": "https://avatars.githubusercontent.com/u/11883500?v=4", - "description": "Software package for asteroid shape reconstruction from disk-resolved observations", - "topics": [ - "asteroids", - "adaptive-optics", - "shape-reconstruction", - "lightcurves", - "photometry", - "occultations" - ] + "uid": "github/clwainwright/CosmoTransitions", + "url": "https://github.com/clwainwright/CosmoTransitions", + "rel": "/software/repository/github/clwainwright/CosmoTransitions", + "avatar": "https://avatars.githubusercontent.com/u/6962678?v=4", + "description": "A package for analyzing finite or zero-temperature cosmological phase transitions driven by single or multiple scalar fields.", + "topics": [] }, { - "uid": "github/aL3x-O-o-Hung/CAT-Net", - "url": "https://github.com/aL3x-O-o-Hung/CAT-Net", - "rel": "/software/repository/github/aL3x-O-o-Hung/CAT-Net", - "avatar": "https://avatars.githubusercontent.com/u/39303016?v=4", - "description": null, + "uid": "github/SchedMD/slurm", + "url": "https://github.com/SchedMD/slurm", + "rel": "/software/repository/github/SchedMD/slurm", + "avatar": "https://avatars1.githubusercontent.com/u/740245?v=4", + "description": "Slurm: A Highly Scalable Workload Manager", "topics": [] }, { - "uid": "github/rathnakumars/difference-smoothing", - "url": "https://github.com/rathnakumars/difference-smoothing", - "rel": "/software/repository/github/rathnakumars/difference-smoothing", - "avatar": "https://avatars.githubusercontent.com/u/13029625?v=4", - "description": "MATLAB implementation of difference-smoothing algorithm and detailed results obtained by testing the codes on a large sample of simulated light curves from TDC1, described in an article published in MNRAS (arXiv:1704.00706)", + "uid": "github/DorianDepriester/mtex2Gmsh", + "url": "https://github.com/DorianDepriester/MTEX2Gmsh", + "rel": "/software/repository/github/DorianDepriester/mtex2Gmsh", + "avatar": "https://avatars3.githubusercontent.com/u/7643875?v=4", + "description": "Matlab toolbox for generating 2D meshes from EBSD data", "topics": [] }, { - "uid": "github/bxia888/CEFCIG", - "url": "https://github.com/bxia888/CEFCIG", - "rel": "/software/repository/github/bxia888/CEFCIG", - "avatar": "https://avatars.githubusercontent.com/u/43397735?v=4", - "description": "CEFCIG (Computational Epigenetic Framework for Cell Identity Gene Discovery)", + "uid": "github/motu-tool/mOTUs", + "url": "https://github.com/motu-tool/mOTUs", + "rel": "/software/repository/github/motu-tool/mOTUs", + "avatar": "https://avatars.githubusercontent.com/u/37665514?v=4", + "description": "motus - a tool for marker gene-based OTU (mOTU) profiling", "topics": [] }, { - "uid": "github/michaelhb/superplot", - "url": "https://github.com/michaelhb/superplot", - "rel": "/software/repository/github/michaelhb/superplot", - "avatar": "https://avatars.githubusercontent.com/u/7548044?v=4", - "description": "GUI for making high-quality plots from data from MultiNest or BAYES-X", - "topics": [] + "uid": "github/FourierFlows/GeophysicalFlows.jl", + "url": "https://github.com/FourierFlows/GeophysicalFlows.jl", + "rel": "/software/repository/github/FourierFlows/GeophysicalFlows.jl", + "avatar": "https://avatars.githubusercontent.com/u/35040959?v=4", + "description": "Geophysical fluid dynamics pseudospectral solvers with Julia and FourierFlows.jl.", + "topics": [ + "qg", + "quasigeostrophy", + "pdes", + "sqg", + "baroclinic", + "geophysical-fluid-dynamics", + "fourierflows", + "navier-stokes" + ] }, { - "uid": "github/julie-forman-kay-lab/SPyCi-PDB", - "url": "https://github.com/julie-forman-kay-lab/SPyCi-PDB", - "rel": "/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", - "avatar": "https://avatars.githubusercontent.com/u/53438277?v=4", - "description": "Structural Python (Back) Calculator Interface for PDBs", - "topics": [] + "uid": "github/upb-lea/gym-electric-motor", + "url": "https://github.com/upb-lea/gym-electric-motor", + "rel": "/software/repository/github/upb-lea/gym-electric-motor", + "avatar": "https://avatars.githubusercontent.com/u/55782224?v=4", + "description": "Gym Electric Motor (GEM): An OpenAI Gym Environment for Electric Motors", + "topics": [ + "reinforcement-learning", + "openai-gym-environments", + "machinelearning", + "openai-gym", + "openai", + "gym-environment", + "pmsm", + "motor-models", + "converters", + "benchmark", + "electrical-engineering", + "electric-drive" + ] }, { - "uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", - "url": "https://github.com/GOMC-WSU/MoSDeF-dihedral-fit", - "rel": "/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", - "avatar": "https://avatars.githubusercontent.com/u/11666264?v=4", - "description": "MoSDeF-dihedral-fit: A simple software package to fit dihedrals via the MoSDeF software", + "uid": "github/upb-lea/ElectricGrid.jl", + "url": "https://github.com/upb-lea/ElectricGrid.jl", + "rel": "/software/repository/github/upb-lea/ElectricGrid.jl", + "avatar": "https://avatars.githubusercontent.com/u/55782224?v=4", + "description": "A time domain electrical energy grid modeling and simulation tool with a focus on the control of power electronics converters", "topics": [] }, { - "uid": "github/GOMC-WSU/GOMC", - "url": "https://github.com/GOMC-WSU/GOMC", - "rel": "/software/repository/github/GOMC-WSU/GOMC", - "avatar": "https://avatars.githubusercontent.com/u/11666264?v=4", - "description": "GOMC - GPU Optimized Monte Carlo is a parallel molecular simulation code designed for high-performance simulation of large systems", + "uid": "github/upb-lea/openmodelica-microgrid-gym", + "url": "https://github.com/upb-lea/openmodelica-microgrid-gym", + "rel": "/software/repository/github/upb-lea/openmodelica-microgrid-gym", + "avatar": "https://avatars0.githubusercontent.com/u/55782224?v=4", + "description": "OpenModelica Microgrid Gym (OMG): An OpenAI Gym Environment for Microgrids", "topics": [ - "monte-carlo", - "monte-carlo-simulation", - "gpu", - "openmp", - "adsorption", - "free-energy", - "phase-equilibrium", - "surface-tension", - "cuda", - "gibbs-ensemble", - "grand-canonical-monte-carlo" + "reinforcement-learning", + "openai-gym", + "openai-gym-environments", + "machine-learning", + "control", + "simulation", + "modelica", + "openmodelica", + "power-electronics", + "power-systems", + "microgrid", + "energy-system-modeling", + "power-supply", + "smart-grids", + "engineering", + "electrical-engineering", + "python" ] }, { - "uid": "github/rx-li/EasyCellType", - "url": "https://github.com/rx-li/EasyCellType", - "rel": "/software/repository/github/rx-li/EasyCellType", - "avatar": "https://avatars.githubusercontent.com/u/78374670?v=4", - "description": null, + "uid": "github/Schulik/aiolos", + "url": "https://github.com/Schulik/aiolos", + "rel": "/software/repository/github/Schulik/aiolos", + "avatar": "https://avatars.githubusercontent.com/u/72578233?v=4", + "description": "1-D hydrodynamics code for planetary atmosphere accretion and escape simulations", + "topics": [ + "computational-fluid-dynamics", + "gas-dynamics", + "radiation-transport", + "reacting-flow-simulations" + ] + }, + { + "uid": "github/astropy/astroquery", + "url": "https://github.com/astropy/astroquery", + "rel": "/software/repository/github/astropy/astroquery", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Functions and classes to access online data resources. Maintainers: @keflavich and @bsipocz and @ceb8", + "topics": [ + "astropy", + "python", + "astropy-affiliated", + "astronomy", + "hacktoberfest", + "closember" + ] + }, + { + "uid": "github/astropy/astropy", + "url": "https://github.com/astropy/astropy", + "rel": "/software/repository/github/astropy/astropy", + "avatar": "https://avatars0.githubusercontent.com/u/847984?v=4", + "description": "Repository for the Astropy core package", + "topics": [ + "python", + "astronomy", + "science" + ] + }, + { + "uid": "github/astropy/astroplan", + "url": "https://github.com/astropy/astroplan", + "rel": "/software/repository/github/astropy/astroplan", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Observation planning package for astronomers", "topics": [] }, { - "uid": "github/RoelofBerg/limereg", - "url": "https://github.com/RoelofBerg/limereg", - "rel": "/software/repository/github/RoelofBerg/limereg", - "avatar": "https://avatars.githubusercontent.com/u/7037594?v=4", - "description": "Lightweight, derivative based, rigid, 2D Image Registration", + "uid": "github/astropy/SPISEA", + "url": "https://github.com/astropy/SPISEA", + "rel": "/software/repository/github/astropy/SPISEA", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Stellar Population Synthesis Modeling", "topics": [] }, { - "uid": "github/crs4/rocrate-validator", - "url": "https://github.com/crs4/rocrate-validator", - "rel": "/software/repository/github/crs4/rocrate-validator", - "avatar": "https://avatars.githubusercontent.com/u/4609555?v=4", - "description": "A Python package to validate RO-Crates", + "uid": "github/astropy/halotools", + "url": "https://github.com/astropy/halotools", + "rel": "/software/repository/github/astropy/halotools", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models", "topics": [] }, { - "uid": "github/crs4/life_monitor", - "url": "https://github.com/crs4/life_monitor", - "rel": "/software/repository/github/crs4/life_monitor", - "avatar": "https://avatars.githubusercontent.com/u/4609555?v=4", - "description": "Workflow Sustainability Service", + "uid": "github/astropy/specutils", + "url": "https://github.com/astropy/specutils", + "rel": "/software/repository/github/astropy/specutils", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "An Astropy coordinated package for astronomical spectroscopy. Maintainers: @nmearl @rosteen @keflavich @eteq", "topics": [ - "workflow", - "monitoring", - "sustainable-software", - "testing" + "astropy" ] }, { - "uid": "github/arangrhie/merfin", - "url": "https://github.com/arangrhie/merfin", - "rel": "/software/repository/github/arangrhie/merfin", - "avatar": "https://avatars.githubusercontent.com/u/12814549?v=4", - "description": "Evaluate variant calls and its combination with k-mer multiplicity", + "uid": "github/astropy/astroscrappy", + "url": "https://github.com/astropy/astroscrappy", + "rel": "/software/repository/github/astropy/astroscrappy", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Speedy Cosmic Ray Annihilation Package in Python", "topics": [] }, { - "uid": "github/Ajstros/pyripherals", - "url": "https://github.com/Ajstros/pyripherals", - "rel": "/software/repository/github/Ajstros/pyripherals", - "avatar": "https://avatars.githubusercontent.com/u/69999361?v=4", - "description": "Python solution for communicating with peripheral ICs", + "uid": "github/astropy/ccdproc", + "url": "https://github.com/astropy/ccdproc", + "rel": "/software/repository/github/astropy/ccdproc", + "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", + "description": "Astropy affiliated package for reducing optical/IR CCD data", + "topics": [ + "python", + "astropy-affiliated", + "ccd", + "astronomy" + ] + }, + { + "uid": "github/Tomoaki-Ishiyama/mpi-rockstar", + "url": "https://github.com/Tomoaki-Ishiyama/mpi-rockstar", + "rel": "/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", + "avatar": "https://avatars.githubusercontent.com/u/50941374?v=4", + "description": "MPI-Rockstar: a Hybrid MPI and OpenMP Parallel Implementation of the Rockstar Halo finder", "topics": [] }, { - "uid": "github/FastMLC/fMLC", - "url": "https://github.com/FastMLC/fMLC", - "rel": "/software/repository/github/FastMLC/fMLC", - "avatar": "https://avatars3.githubusercontent.com/u/29062772?v=4", - "description": null, + "uid": "github/gtayana/CVRMS", + "url": "https://github.com/gtayana/CVRMS", + "rel": "/software/repository/github/gtayana/CVRMS", + "avatar": "https://avatars2.githubusercontent.com/u/39774067?v=4", + "description": "Marker selection for genome-wide prediction", + "topics": [] + }, + { + "uid": "github/ORNL/icat", + "url": "https://github.com/ORNL/icat", + "rel": "/software/repository/github/ORNL/icat", + "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", + "description": "Interactive machine learning dashboard for textual data exploration", "topics": [] }, { - "uid": "github/darthoctopus/reggae", - "url": "https://github.com/darthoctopus/reggae", - "rel": "/software/repository/github/darthoctopus/reggae", - "avatar": "https://avatars.githubusercontent.com/u/5761408?v=4", - "description": "pbjam for dipole modes", + "uid": "github/ORNL/AdditiveFOAM", + "url": "https://github.com/ORNL/AdditiveFOAM", + "rel": "/software/repository/github/ORNL/AdditiveFOAM", + "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", + "description": "A continuum physics code for additive manufacturing built on OpenFOAM", + "topics": [ + "openfoam", + "additive-manufactering", + "fluid-flow", + "heat-transport", + "simulation-modeling" + ] + }, + { + "uid": "github/ORNL/tx2", + "url": "https://github.com/ORNL/tx2", + "rel": "/software/repository/github/ORNL/tx2", + "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", + "description": "Transformer eXplainability and eXploration", "topics": [] }, { - "uid": "github/astro-friedel/CADRE", - "url": "https://github.com/astro-friedel/CADRE", - "rel": "/software/repository/github/astro-friedel/CADRE", - "avatar": "https://avatars.githubusercontent.com/u/3028041?v=4", - "description": "CARMA Data Reduction Pipeline", + "uid": "github/ORNL/curifactory", + "url": "https://github.com/ORNL/curifactory", + "rel": "/software/repository/github/ORNL/curifactory", + "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", + "description": "An experiment workflow and organization tool.", "topics": [] }, { - "uid": "github/canimus/cuallee", - "url": "https://github.com/canimus/cuallee", - "rel": "/software/repository/github/canimus/cuallee", - "avatar": "https://avatars.githubusercontent.com/u/278303?v=4", - "description": "Possibly the fastest DataFrame-agnostic quality check library in town.", + "uid": "github/ORNL/Equilipy", + "url": "https://github.com/ORNL/Equilipy", + "rel": "/software/repository/github/ORNL/Equilipy", + "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", + "description": "Open-source python package for multicomponent multiphase equilibrium CALPHAD calculations", "topics": [ - "bigdata", - "performance-metrics", - "pyspark", - "python3", - "unit-testing", - "pydeequ", - "pandas", - "snowpark", - "dataquality", - "data-quality", - "data-quality-checks" + "calphad", + "python" ] }, { - "uid": "github/CSUBioGroup/GraphLncLoc", - "url": "https://github.com/CSUBioGroup/GraphLncLoc", - "rel": "/software/repository/github/CSUBioGroup/GraphLncLoc", - "avatar": "https://avatars.githubusercontent.com/u/52996140?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/lightning-project/lightning", - "url": "https://github.com/lightning-project/lightning", - "rel": "/software/repository/github/lightning-project/lightning", - "avatar": "https://avatars.githubusercontent.com/u/93259883?v=4", - "description": "Lightning: Fast data processing using GPUs on distributed platforms", + "uid": "github/biomedia-mira/istn", + "url": "https://github.com/biomedia-mira/istn", + "rel": "/software/repository/github/biomedia-mira/istn", + "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", + "description": "Image-and-Spatial Transformer Networks", "topics": [ - "rust", - "cuda", - "gpu", - "distributed-systems", - "cuda-kernels" + "image-registration", + "deep-learning", + "spatial-transformer-networks", + "medical-imaging" ] }, { - "uid": "github/ariedel/lacewing", - "url": "https://github.com/ariedel/lacewing", - "rel": "/software/repository/github/ariedel/lacewing", - "avatar": "https://avatars.githubusercontent.com/u/2412871?v=4", - "description": "Repository for the LACEwING moving group identification code (Riedel et al. 2017)", + "uid": "github/biomedia-mira/masf", + "url": "https://github.com/biomedia-mira/masf", + "rel": "/software/repository/github/biomedia-mira/masf", + "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", + "description": "Domain Generalization via Model-Agnostic Learning of Semantic Features", "topics": [] }, { - "uid": "github/SophieMLV/axionHMcode", - "url": "https://github.com/SophieMLV/axionHMcode", - "rel": "/software/repository/github/SophieMLV/axionHMcode", - "avatar": "https://avatars.githubusercontent.com/u/79702672?v=4", - "description": "A fully expanded halo model to calculate the non-linear power spectrum in a mixed dark matter cosmology with ultra-light axions", - "topics": [] + "uid": "github/biomedia-mira/deepscm", + "url": "https://github.com/biomedia-mira/deepscm", + "rel": "/software/repository/github/biomedia-mira/deepscm", + "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", + "description": "Repository for Deep Structural Causal Models for Tractable Counterfactual Inference", + "topics": [ + "causal-inference", + "deep-learning", + "counterfactuals", + "variational-autoencoders", + "normalizing-flows" + ] }, { - "uid": "github/DMGW-Goethe/imripy", - "url": "https://github.com/DMGW-Goethe/imripy", - "rel": "/software/repository/github/DMGW-Goethe/imripy", - "avatar": "https://avatars.githubusercontent.com/u/93539226?v=4", - "description": "A python code able to simulate Intermediate Mass Ratio Inspirals (IMRI)", + "uid": "github/biomedia-mira/drop2", + "url": "https://github.com/biomedia-mira/drop2", + "rel": "/software/repository/github/biomedia-mira/drop2", + "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", + "description": "drop2 - intensity-based image registration", "topics": [] }, { - "uid": "github/gouverneurp/eVAS", - "url": "https://github.com/gouverneurp/eVAS", - "rel": "/software/repository/github/gouverneurp/eVAS", - "avatar": "https://avatars.githubusercontent.com/u/111120410?v=4", - "description": null, + "uid": "github/biomedia-mira/blast-ct", + "url": "https://github.com/biomedia-mira/blast-ct", + "rel": "/software/repository/github/biomedia-mira/blast-ct", + "avatar": "https://avatars.githubusercontent.com/u/52955096?v=4", + "description": "Brain Lesion Analysis and Segmentation Tool for Computed Tomography", "topics": [] }, { - "uid": "github/epiforecasts/covidregionaldata", - "url": "https://github.com/epiforecasts/covidregionaldata", - "rel": "/software/repository/github/epiforecasts/covidregionaldata", - "avatar": "https://avatars.githubusercontent.com/u/54675094?v=4", - "description": "An interface to subnational and national level COVID-19 data. For all countries supported, this includes a daily time-series of cases. Wherever available we also provide data on deaths, hospitalisations, and tests. National level data is also supported using a range of data sources as well as linelist data and links to intervention data sets.", + "uid": "github/NKI-AI/direct", + "url": "https://github.com/NKI-AI/direct", + "rel": "/software/repository/github/NKI-AI/direct", + "avatar": "https://avatars.githubusercontent.com/u/44191196?v=4", + "description": "Deep learning framework for MRI reconstruction", "topics": [ - "covid-19", - "rstats", - "data", - "regional-data", - "open-science", - "r6" + "pytorch", + "deep-learning", + "mri-reconstruction", + "inverse-problems", + "medical-imaging", + "fastmri-challenge" ] }, { - "uid": "github/fred3m/toyz", - "url": "https://github.com/fred3m/toyz", - "rel": "/software/repository/github/fred3m/toyz", - "avatar": "https://avatars.githubusercontent.com/u/2251900?v=4", - "description": "Toyz for Data Analysis and Reduction", + "uid": "github/e-mental-health/data-processing", + "url": "https://github.com/e-mental-health/data-processing", + "rel": "/software/repository/github/e-mental-health/data-processing", + "avatar": "https://avatars.githubusercontent.com/u/38315264?v=4", + "description": "Data processing scripts for the project What Works When for Whom?", "topics": [] }, { - "uid": "github/hablabx/rfast", - "url": "https://github.com/hablabx/rfast", - "rel": "/software/repository/github/hablabx/rfast", - "avatar": "https://avatars.githubusercontent.com/u/51726059?v=4", - "description": "A fast tool for planetary spectral forward and inverse modeling.", + "uid": "github/e-mental-health/orange-hackathon", + "url": "https://github.com/e-mental-health/orange-hackathon", + "rel": "/software/repository/github/e-mental-health/orange-hackathon", + "avatar": "https://avatars.githubusercontent.com/u/38315264?v=4", + "description": "Orange modules for text processing in the project What Works When for Whom? ", "topics": [] }, { - "uid": "github/kateharborne/SimSpin", - "url": "https://github.com/kateharborne/SimSpin", - "rel": "/software/repository/github/kateharborne/SimSpin", - "avatar": "https://avatars.githubusercontent.com/u/29746421?v=4", - "description": "SimSpin - A package for the kinematic analysis of galaxy simulations", - "topics": [ - "simulation", - "ifs", - "kinematics", - "galaxies" - ] + "uid": "github/bulik/ldsc", + "url": "https://github.com/bulik/ldsc", + "rel": "/software/repository/github/bulik/ldsc", + "avatar": "https://avatars.githubusercontent.com/u/3229189?v=4", + "description": "LD Score Regression (LDSC)", + "topics": [] }, { - "uid": "github/dingshandeng/diskmint", - "url": "https://github.com/DingshanDeng/DiskMINT", - "rel": "/software/repository/github/dingshandeng/diskmint", - "avatar": "https://avatars.githubusercontent.com/u/88793427?v=4", - "description": "DiskMINT (Disk Model For INdividual Targets): a tool to estimate disk masses with CO isotopologues", + "uid": "github/mkunimoto/LEO-vetter", + "url": "https://github.com/mkunimoto/LEO-vetter", + "rel": "/software/repository/github/mkunimoto/LEO-vetter", + "avatar": "https://avatars.githubusercontent.com/u/33587249?v=4", + "description": "Automated vetting for TESS planet candidates", "topics": [] }, { - "uid": "github/merenlab/anvio", - "url": "https://github.com/merenlab/anvio", - "rel": "/software/repository/github/merenlab/anvio", - "avatar": "https://avatars.githubusercontent.com/u/22106511?v=4", - "description": "An analysis and visualization platform for 'omics data", - "topics": [ - "metagenomics", - "metatranscriptomics", - "pangenomics", - "comparative-genomics", - "science", - "visualization", - "bioinformatics", - "phylogenomics", - "population-genetics", - "python", - "javascript", - "anvio" - ] + "uid": "github/alvinxhan/Phydelity", + "url": "https://github.com/alvinxhan/Phydelity", + "rel": "/software/repository/github/alvinxhan/Phydelity", + "avatar": "https://avatars0.githubusercontent.com/u/17022871?v=4", + "description": "Inference of putative transmission phylogenetic clusters", + "topics": [] }, { - "uid": "github/GregoryFaust/samblaster", - "url": "https://github.com/GregoryFaust/samblaster", - "rel": "/software/repository/github/GregoryFaust/samblaster", - "avatar": "https://avatars.githubusercontent.com/u/6653381?v=4", - "description": "samblaster: a tool to mark duplicates and extract discordant and split reads from sam files.", + "uid": "github/james-m-osborn/astrosat", + "url": "https://github.com/james-m-osborn/astrosat", + "rel": "/software/repository/github/james-m-osborn/astrosat", + "avatar": "https://avatars.githubusercontent.com/u/25983686?v=4", + "description": null, "topics": [] }, { - "uid": "github/GregoryFaust/yaha", - "url": "https://github.com/GregoryFaust/yaha", - "rel": "/software/repository/github/GregoryFaust/yaha", - "avatar": "https://avatars.githubusercontent.com/u/6653381?v=4", - "description": "yaha: a flexible, sensitive and accurate DNA alignment tool designed to find optimal split-read mappings on single-end queries from 100bp to 32kb.", + "uid": "github/MaudeDavidLab/GMEmbeddings", + "url": "https://github.com/MaudeDavidLab/GMEmbeddings", + "rel": "/software/repository/github/MaudeDavidLab/GMEmbeddings", + "avatar": "https://avatars.githubusercontent.com/u/36453608?v=4", + "description": null, "topics": [] }, { - "uid": "github/ggonnella/gfapy", - "url": "https://github.com/ggonnella/gfapy", - "rel": "/software/repository/github/ggonnella/gfapy", - "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", - "description": "Gfapy: a flexible and extensible software library for handling sequence graphs in Python", - "topics": [ - "bioinformatics", - "gfa", - "graphs", - "sequence-analysis", - "assembly" - ] + "uid": "github/svi-opensource/libics", + "url": "https://github.com/svi-opensource/libics", + "rel": "/software/repository/github/svi-opensource/libics", + "avatar": "https://avatars.githubusercontent.com/u/22935556?v=4", + "description": "Image Cytometry Standard file reading and writing.", + "topics": [] }, { - "uid": "github/ggonnella/fastsubtrees", - "url": "https://github.com/ggonnella/fastsubtrees", - "rel": "/software/repository/github/ggonnella/fastsubtrees", - "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", - "description": "Python library and command line script , for fast extraction of subtrees of fairly large trees, consisting of millions of nodes, such as the NCBI taxonomy tree.", - "topics": [ - "bioinformatics", - "ncbi-taxonomy", - "python", - "subtree", - "taxonomy", - "tree", - "subtree-extraction", - "subtree-query" - ] + "uid": "github/lys-devel/lys", + "url": "https://github.com/lys-devel/lys", + "rel": "/software/repository/github/lys-devel/lys", + "avatar": "https://avatars.githubusercontent.com/u/136776639?v=4", + "description": "Interactive multi-dimensional data analysis and visualization", + "topics": [] }, { - "uid": "github/ggonnella/rgfa", - "url": "https://github.com/ggonnella/rgfa", - "rel": "/software/repository/github/ggonnella/rgfa", - "avatar": "https://avatars.githubusercontent.com/u/21620?v=4", - "description": "Ruby library for handling GFA files", + "uid": "github/pennucci/PulsePortraiture", + "url": "https://github.com/pennucci/PulsePortraiture", + "rel": "/software/repository/github/pennucci/PulsePortraiture", + "avatar": "https://avatars.githubusercontent.com/u/1768226?v=4", + "description": "PulsePortraiture (PP): a wideband pulsar timing code written in python. It uses an extension of Joe Taylor's FFTFIT algorithm (Taylor 1992) to simultaneously measure a phase (TOA) and dispersion measure (DM). PSRCHIVE, lmfit, and the latest vertsions of numpy and scipy are required.", "topics": [] }, { - "uid": "github/ewels/MultiQC", - "url": "https://github.com/MultiQC/MultiQC", - "rel": "/software/repository/github/ewels/MultiQC", - "avatar": "https://avatars.githubusercontent.com/u/18548644?v=4", - "description": "Aggregate results from bioinformatics analyses across many samples into a single report.", - "topics": [ - "bioinformatics", - "analysis", - "pypi", - "bioconda", - "multiqc", - "python", - "data-visualization", - "quality-control", - "reporting", - "seqera", - "vizualisation" - ] + "uid": "github/spastras/galclass", + "url": "https://github.com/spastras/galclass", + "rel": "/software/repository/github/spastras/galclass", + "avatar": "https://avatars.githubusercontent.com/u/79917367?v=4", + "description": "A python module for the morphological classification of galaxies", + "topics": [] }, { - "uid": "github/tacazares/SeedMatchR", - "url": "https://github.com/tacazares/SeedMatchR", - "rel": "/software/repository/github/tacazares/SeedMatchR", - "avatar": "https://avatars.githubusercontent.com/u/31480706?v=4", - "description": "Off-target analysis of siRNA knock down paired with RNAseq", + "uid": "github/nkallima/sim-universal-construction", + "url": "https://github.com/nkallima/sim-universal-construction", + "rel": "/software/repository/github/nkallima/sim-universal-construction", + "avatar": "https://avatars.githubusercontent.com/u/4153902?v=4", + "description": "An open-source framework for concurrent data-structures and benchmarks. ", "topics": [ - "deseq2-analysis", - "mirna", - "rna-seq", - "sirna", - "transcriptomics" + "concurrency", + "concurrent-programming", + "parallel-programming", + "pthreads", + "cc-synch", + "psim", + "osci", + "benchmarks", + "concurrent-queues", + "concurrent-stacks", + "performance-overheads", + "performance-impact", + "machine-architectures", + "queue-locks" ] }, { - "uid": "github/fzi-forschungszentrum-informatik/TSInterpret", - "url": "https://github.com/fzi-forschungszentrum-informatik/TSInterpret", - "rel": "/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", - "avatar": "https://avatars.githubusercontent.com/u/8257565?v=4", - "description": "An Open-Source Library for the interpretability of time series classifiers", + "uid": "github/ecological-cities/home2park", + "url": "https://github.com/ecological-cities/home2park", + "rel": "/software/repository/github/ecological-cities/home2park", + "avatar": "https://avatars.githubusercontent.com/u/65454754?v=4", + "description": "home2park: Assess the spatial provision of urban parks", "topics": [ - "counterfactual-explanations", - "explainable-ai", - "explainable-artificial-intelligence", - "explainable-ml", - "feature-attribution", - "interpretability", - "interpretable-machine-learning", - "interpretable-ml", - "time-series" + "cities", + "recreation", + "parks", + "geoinformatics", + "spatial" ] }, { - "uid": "github/auckland-cosmo/interp-mc", - "url": "https://github.com/auckland-cosmo/interp-mc", - "rel": "/software/repository/github/auckland-cosmo/interp-mc", - "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", - "description": "Archival patch to CosmoMC for \"interp-mc\" paper", + "uid": "github/vinisalazar/metaphor", + "url": "https://github.com/vinisalazar/metaphor", + "rel": "/software/repository/github/vinisalazar/metaphor", + "avatar": "https://avatars.githubusercontent.com/u/17276653?v=4", + "description": "Metaphor: a general-purpose workflow for assembly and binning of metagenomes", "topics": [] }, { - "uid": "github/auckland-cosmo/defrost-mpi", - "url": "https://github.com/auckland-cosmo/defrost-mpi", - "rel": "/software/repository/github/auckland-cosmo/defrost-mpi", - "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", - "description": "MPI version of the defrost code ", + "uid": "github/VicidominiLab/BrightEyes-MCS", + "url": "https://github.com/VicidominiLab/BrightEyes-MCS", + "rel": "/software/repository/github/VicidominiLab/BrightEyes-MCS", + "avatar": "https://avatars.githubusercontent.com/u/61466143?v=4", + "description": "BrightEyes Microscope Control Suite", "topics": [] }, { - "uid": "github/auckland-cosmo/PyUltraLight", - "url": "https://github.com/auckland-cosmo/PyUltraLight", - "rel": "/software/repository/github/auckland-cosmo/PyUltraLight", - "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", - "description": "Pseudo-spectral Python code to compute ultralight dark matter dynamics. ", + "uid": "github/saopicc/DDFacet", + "url": "https://github.com/saopicc/DDFacet", + "rel": "/software/repository/github/saopicc/DDFacet", + "avatar": "https://avatars.githubusercontent.com/u/23380437?v=4", + "description": "DDFacet Imaging Project", "topics": [] }, { - "uid": "github/yangao07/abPOA", - "url": "https://github.com/yangao07/abPOA", - "rel": "/software/repository/github/yangao07/abPOA", - "avatar": "https://avatars.githubusercontent.com/u/5309122?v=4", - "description": "abPOA: an SIMD-based C library for fast partial order alignment using adaptive band", - "topics": [ - "simd", - "partial-order-alignment", - "banded-dp", - "long-reads", - "consensus-sequences", - "multiple-sequence-alignment", - "alignment-graph", - "consensus-sequence", - "gfa-format" - ] + "uid": "github/saopicc/killMS", + "url": "https://github.com/saopicc/killMS", + "rel": "/software/repository/github/saopicc/killMS", + "avatar": "https://avatars.githubusercontent.com/u/23380437?v=4", + "description": "Package for direction dependent calibration", + "topics": [] }, { - "uid": "github/yangao07/TideHunter", - "url": "https://github.com/yangao07/TideHunter", - "rel": "/software/repository/github/yangao07/TideHunter", - "avatar": "https://avatars.githubusercontent.com/u/5309122?v=4", - "description": "TideHunter: efficient and sensitive tandem repeat detection from noisy long reads using seed-and-chain", - "topics": [ - "long-reads", - "seed-and-chain", - "multiple-sequence-alignment", - "partial-order-alignment", - "tandem-repeats" - ] + "uid": "github/cjcollin37/IsoFATE", + "url": "https://github.com/cjcollin37/IsoFATE", + "rel": "/software/repository/github/cjcollin37/IsoFATE", + "avatar": "https://avatars.githubusercontent.com/u/63514976?v=4", + "description": "Open source code for the numerical model IsoFATE: Isotopic Fractionation via ATmospheric Escape", + "topics": [] }, { - "uid": "github/BRAIN-TO/GIRFReco.jl", - "url": "https://github.com/BRAIN-TO/GIRFReco.jl", - "rel": "/software/repository/github/BRAIN-TO/GIRFReco.jl", - "avatar": "https://avatars.githubusercontent.com/u/62714197?v=4", - "description": "An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia", + "uid": "github/simon-smart88/shinyscholar", + "url": "https://github.com/simon-smart88/shinyscholar", + "rel": "/software/repository/github/simon-smart88/shinyscholar", + "avatar": "https://avatars.githubusercontent.com/u/137152810?v=4", + "description": "A template for creating modular shiny applications that meet academic standards and are reproducible", + "topics": [] + }, + { + "uid": "github/astro-informatics/s2fft", + "url": "https://github.com/astro-informatics/s2fft", + "rel": "/software/repository/github/astro-informatics/s2fft", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Differentiable and accelerated spherical transforms with JAX", "topics": [ - "mri", - "mri-brain", - "mri-reconstruction" + "differentiable-programming", + "jax", + "spherical-harmonics", + "wigner-d-matrix", + "wigner-transform", + "fourier-transform", + "recursion-algorithm", + "pytorch" ] }, { - "uid": "github/hemanthpruthvi/PyAstroPol", - "url": "https://github.com/hemanthpruthvi/PyAstroPol", - "rel": "/software/repository/github/hemanthpruthvi/PyAstroPol", - "avatar": "https://avatars1.githubusercontent.com/u/69858702?v=4", - "description": "Instrumental Polarization Analysis of Astronomical Optics", + "uid": "github/astro-informatics/s2", + "url": "https://github.com/astro-informatics/s2", + "rel": "/software/repository/github/astro-informatics/s2", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Functions on the sphere", "topics": [] }, { - "uid": "github/cmoestl/3DCORE", - "url": "https://github.com/cmoestl/3DCORE", - "rel": "/software/repository/github/cmoestl/3DCORE", - "avatar": "https://avatars.githubusercontent.com/u/14162616?v=4", - "description": "3D coronal mass ejection flux rope modeling", + "uid": "github/astro-informatics/sleplet", + "url": "https://github.com/astro-informatics/sleplet", + "rel": "/software/repository/github/astro-informatics/sleplet", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Slepian Scale-Discretised Wavelets", "topics": [ - "heliophysics", - "spaceweather", - "spacephysics", - "solarwind" + "manifolds", + "python", + "slepian-functions", + "sphere", + "wavelets" ] }, { - "uid": "github/AstarVienna/skycalc_ipy", - "url": "https://github.com/AstarVienna/skycalc_ipy", - "rel": "/software/repository/github/AstarVienna/skycalc_ipy", - "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", - "description": "iPython version of skycalc_cli", - "topics": [] + "uid": "github/astro-informatics/QuantifAI", + "url": "https://github.com/astro-informatics/QuantifAI", + "rel": "/software/repository/github/astro-informatics/QuantifAI", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "PyTorch-based RI imaging reconstruction package with scalable Bayesian uncertainty quantification relying on data-driven (learned) priors", + "topics": [ + "machine-learning", + "radio-interferometry", + "uncertainty-quantification", + "high-dimensional-data", + "pytorch" + ] }, { - "uid": "github/AstarVienna/ScopeSim_Templates", - "url": "https://github.com/AstarVienna/ScopeSim_Templates", - "rel": "/software/repository/github/AstarVienna/ScopeSim_Templates", - "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", - "description": null, + "uid": "github/astro-informatics/massmappy", + "url": "https://github.com/astro-informatics/massmappy", + "rel": "/software/repository/github/astro-informatics/massmappy", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Mapping dark matter on the celestial sphere", "topics": [] }, { - "uid": "github/AstarVienna/irdb", - "url": "https://github.com/AstarVienna/irdb", - "rel": "/software/repository/github/AstarVienna/irdb", - "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", - "description": "A database containing instrument data for infrared telescopes", + "uid": "github/astro-informatics/flag-archive", + "url": "https://github.com/astro-informatics/flag-archive", + "rel": "/software/repository/github/astro-informatics/flag-archive", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Fast Fourier-Laguerre transform on the ball and exact spherical Bessel and Fourier-Bessel transforms", "topics": [] }, { - "uid": "github/AstarVienna/Pyckles", - "url": "https://github.com/AstarVienna/Pyckles", - "rel": "/software/repository/github/AstarVienna/Pyckles", - "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", - "description": "A super lightweight interface to load spectra from the Pickles 1998 catalogue", + "uid": "github/astro-informatics/ssht", + "url": "https://github.com/astro-informatics/ssht", + "rel": "/software/repository/github/astro-informatics/ssht", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Fast and exact spin spherical harmonic transforms", "topics": [] }, { - "uid": "github/AstarVienna/AnisoCADO", - "url": "https://github.com/AstarVienna/AnisoCADO", - "rel": "/software/repository/github/AstarVienna/AnisoCADO", - "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", - "description": "A package to generate off-axis PSFs for the SCAO mode for MICADO at the ELT", - "topics": [] + "uid": "github/astro-informatics/harmonic", + "url": "https://github.com/astro-informatics/harmonic", + "rel": "/software/repository/github/astro-informatics/harmonic", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Machine learning assisted marginal likelihood (Bayesian evidence) estimation for Bayesian model selection", + "topics": [ + "bayesian-inference", + "machine-learning", + "statistics-toolbox", + "code" + ] }, { - "uid": "github/flabarga/iSTARMOD", - "url": "https://github.com/flabarga/iSTARMOD", - "rel": "/software/repository/github/flabarga/iSTARMOD", - "avatar": "https://avatars.githubusercontent.com/u/38010370?v=4", - "description": "python code implementing Spectral Subtraction Technique to study chromospheric activity in Cool Stars", - "topics": [] + "uid": "github/astro-informatics/DarkMappy", + "url": "https://github.com/astro-informatics/DarkMappy", + "rel": "/software/repository/github/astro-informatics/DarkMappy", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Scalable mapping of the dark universe", + "topics": [ + "dark-matter", + "bayesian", + "inverse-problems", + "signal-processing", + "harmonic-analysis" + ] }, { - "uid": "github/IRL2/nanover-server-py", - "url": "https://github.com/IRL2/nanover-server-py", - "rel": "/software/repository/github/IRL2/nanover-server-py", - "avatar": "https://avatars.githubusercontent.com/u/1699106?v=4", - "description": "Interactive Molecular Dynamics (iMD) in VR", + "uid": "github/astro-informatics/comb", + "url": "https://github.com/astro-informatics/comb", + "rel": "/software/repository/github/astro-informatics/comb", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Compact object simulations on the sphere", "topics": [] }, { - "uid": "github/uclchem/Chemulator", - "url": "https://github.com/uclchem/Chemulator", - "rel": "/software/repository/github/uclchem/Chemulator", - "avatar": "https://avatars.githubusercontent.com/u/14346619?v=4", - "description": "The thermochemical emulator for hydrodynamical modelling", + "uid": "github/astro-informatics/s2let", + "url": "https://github.com/astro-informatics/s2let", + "rel": "/software/repository/github/astro-informatics/s2let", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Fast wavelet transforms on the sphere.", "topics": [] }, { - "uid": "github/uclchem/SpectralRadex", - "url": "https://github.com/uclchem/SpectralRadex", - "rel": "/software/repository/github/uclchem/SpectralRadex", - "avatar": "https://avatars.githubusercontent.com/u/14346619?v=4", - "description": "A Python library for spectral modelling and RADEX", + "uid": "github/astro-informatics/stringgen", + "url": "https://github.com/astro-informatics/stringgen", + "rel": "/software/repository/github/astro-informatics/stringgen", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Scattering based cosmic string emulation", "topics": [ - "astrophysics", - "radiative-transfer", - "radex", - "astronomy", - "python" + "cosmic-strings", + "cosmology", + "emulation", + "scattering-transform", + "statistics", + "wavelet-transform" ] }, { - "uid": "github/xinyiguan/py2lispIDyOM", - "url": "https://github.com/xinyiguan/py2lispIDyOM", - "rel": "/software/repository/github/xinyiguan/py2lispIDyOM", - "avatar": "https://avatars.githubusercontent.com/u/43217135?v=4", - "description": "A Python package for IDyOM", + "uid": "github/astro-informatics/RequiSim", + "url": "https://github.com/astro-informatics/RequiSim", + "rel": "/software/repository/github/astro-informatics/RequiSim", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": null, "topics": [] }, { - "uid": "github/InfOmics/PanDelos-frags", - "url": "https://github.com/InfOmics/PanDelos-frags", - "rel": "/software/repository/github/InfOmics/PanDelos-frags", - "avatar": "https://avatars.githubusercontent.com/u/37143442?v=4", - "description": "A version of PanDelos that discovers pangenomic content in fragmented genomes", + "uid": "github/astro-informatics/flaglet-archive", + "url": "https://github.com/astro-informatics/flaglet-archive", + "rel": "/software/repository/github/astro-informatics/flaglet-archive", + "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", + "description": "Fast and exact wavelet transform on the ball", "topics": [] }, { - "uid": "github/Sm00thix/IKPLS", - "url": "https://github.com/Sm00thix/IKPLS", - "rel": "/software/repository/github/Sm00thix/IKPLS", - "avatar": "https://avatars.githubusercontent.com/u/12599803?v=4", - "description": "Fast CPU and GPU Python implementations of Improved Kernel PLS by Dayal and MacGregor (1997) and Shortcutting Cross-Validation by Engstr\u00f8m (2024).", + "uid": "github/AgrDataSci/climatrends", + "url": "https://github.com/AgrDataSci/climatrends", + "rel": "/software/repository/github/AgrDataSci/climatrends", + "avatar": "https://avatars.githubusercontent.com/u/50193892?v=4", + "description": "Climate Variability Indices for Ecological Modelling", "topics": [ - "data-science", - "gpu-support", - "linear-regression", - "partial-least-squares", - "partial-least-squares-regression", - "pls", - "plsda", - "plsr", - "algorithm", - "tpu-acceleration" + "climate-data", + "climatology", + "timeseries-analysis" ] }, { - "uid": "github/joglekara/VlaPy", - "url": "https://github.com/joglekara/VlaPy", - "rel": "/software/repository/github/joglekara/VlaPy", - "avatar": "https://avatars1.githubusercontent.com/u/13438206?v=4", - "description": "1D-1V Vlasov-Poisson(-Fokker-Planck) Plasma Physics Simulation Tool", + "uid": "github/vojtech-sidorin/quickclump", + "url": "https://github.com/vojtech-sidorin/quickclump", + "rel": "/software/repository/github/vojtech-sidorin/quickclump", + "avatar": "https://avatars.githubusercontent.com/u/10384347?v=4", + "description": "Identify clumps within a 3D FITS datacube.", "topics": [] }, { - "uid": "github/pratheesh3780/grapesAgri1", - "url": "https://github.com/pratheesh3780/grapesAgri1", - "rel": "/software/repository/github/pratheesh3780/grapesAgri1", - "avatar": "https://avatars.githubusercontent.com/u/67531873?v=4", - "description": "Collection of shiny apps for Agricultural research Data Analysis. Allows user to have graphical user interface to perform analysis of Agricultural experimental data. On using the functions in this package a Graphical User Interface will pop up. Apps Works by simple upload of files in CSV format.", + "uid": "github/DrexelLenser/Lenser", + "url": "https://github.com/DrexelLenser/Lenser", + "rel": "/software/repository/github/DrexelLenser/Lenser", + "avatar": "https://avatars.githubusercontent.com/u/65193950?v=4", + "description": "A tool for measuring weak gravitational flexion", "topics": [] }, { - "uid": "github/vbaliga/gaussplotR", - "url": "https://github.com/vbaliga/gaussplotR", - "rel": "/software/repository/github/vbaliga/gaussplotR", - "avatar": "https://avatars.githubusercontent.com/u/9795391?v=4", - "description": "\ud83d\udd14 Fit, predict, and plot 2D Gaussians in R", - "topics": [ - "gaussian", - "r", - "rstats", - "gaussian-interpolation", - "gaussian-plot", - "plotting", - "gaussian-volume", - "2d-gaussian", - "gaussian-fit" - ] - }, - { - "uid": "github/shankarpandala/lazypredict", - "url": "https://github.com/shankarpandala/lazypredict", - "rel": "/software/repository/github/shankarpandala/lazypredict", - "avatar": "https://avatars.githubusercontent.com/u/8924320?v=4", - "description": "Lazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning", + "uid": "github/tum-esm/pyra", + "url": "https://github.com/tum-esm/pyra", + "rel": "/software/repository/github/tum-esm/pyra", + "avatar": "https://avatars.githubusercontent.com/u/89810129?v=4", + "description": "Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software", "topics": [ - "machine-learning", - "automl", - "regression", - "classification" + "bruker", + "opus", + "python", + "tauri", + "camtracker", + "em27", + "cli", + "click", + "fabric", + "docusaurus", + "poetry", + "tailwindcss", + "typescript", + "climate", + "spectrometry", + "autonomous", + "sensor", + "emissions", + "monitoring", + "mypy" ] }, { - "uid": "github/jradavenport/appaloosa", - "url": "https://github.com/jradavenport/appaloosa", - "rel": "/software/repository/github/jradavenport/appaloosa", - "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", - "description": "Python-based flare finding code for Kepler light curves.", - "topics": [] - }, - { - "uid": "github/jradavenport/FBEYE", - "url": "https://github.com/jradavenport/FBEYE", - "rel": "/software/repository/github/jradavenport/FBEYE", - "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", - "description": "Flares By Eye, an IDL suite for analyzing Kepler light curves and validating flares", + "uid": "github/tum-esm/ivy", + "url": "https://github.com/tum-esm/ivy", + "rel": "/software/repository/github/tum-esm/ivy", + "avatar": "https://avatars.githubusercontent.com/u/89810129?v=4", + "description": "a python boilerplate for an IoT node data acqusition system (DAS)", "topics": [] }, { - "uid": "github/jradavenport/TheHammer", - "url": "https://github.com/jradavenport/TheHammer", - "rel": "/software/repository/github/jradavenport/TheHammer", - "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", - "description": "The Hammer: An IDL Spectral Typing Suite", + "uid": "github/sbraden/circle-craters", + "url": "https://github.com/sbraden/circle-craters", + "rel": "/software/repository/github/sbraden/circle-craters", + "avatar": "https://avatars.githubusercontent.com/u/1332595?v=4", + "description": "A planetary science crater-counting plugin for QGIS ", "topics": [] }, { - "uid": "github/logological/gpp", - "url": "https://github.com/logological/gpp", - "rel": "/software/repository/github/logological/gpp", - "avatar": "https://avatars2.githubusercontent.com/u/831326?v=4", - "description": "GPP, a generic preprocessor", + "uid": "github/zonca/dst", + "url": "https://github.com/zonca/dst", + "rel": "/software/repository/github/zonca/dst", + "avatar": "https://avatars.githubusercontent.com/u/383090?v=4", + "description": null, "topics": [] }, { - "uid": "github/nbarbey/TomograPy", - "url": "https://github.com/nbarbey/TomograPy", - "rel": "/software/repository/github/nbarbey/TomograPy", - "avatar": "https://avatars.githubusercontent.com/u/295277?v=4", - "description": "Siddon tomography algorithm", + "uid": "github/zonca/python-qucs", + "url": "https://github.com/zonca/python-qucs", + "rel": "/software/repository/github/zonca/python-qucs", + "avatar": "https://avatars.githubusercontent.com/u/383090?v=4", + "description": "QUCS, (http://qucs.sf.net), is a powerful open-source circuit simulator, python-qucs is a Python package that allows to automate the process of preparing input netlists for several simulations, run them, and export the results.", "topics": [] }, { - "uid": "github/Qiskit-Extensions/qiskit-dynamics", - "url": "https://github.com/Qiskit-Extensions/qiskit-dynamics", - "rel": "/software/repository/github/Qiskit-Extensions/qiskit-dynamics", - "avatar": "https://avatars.githubusercontent.com/u/91233108?v=4", - "description": "Tools for building and solving models of quantum systems in Qiskit", + "uid": "github/jeffdaily/parasail-python", + "url": "https://github.com/jeffdaily/parasail-python", + "rel": "/software/repository/github/jeffdaily/parasail-python", + "avatar": "https://avatars.githubusercontent.com/u/904248?v=4", + "description": "Python bindings for the parasail C library.", "topics": [] }, { - "uid": "github/TPI-Immunogenetics/igmat", - "url": "https://github.com/TPI-Immunogenetics/igmat", - "rel": "/software/repository/github/TPI-Immunogenetics/igmat", - "avatar": "https://avatars.githubusercontent.com/u/87307668?v=4", - "description": "Antibody Multispecies Annotation Tool", + "uid": "github/jeffdaily/parasail", + "url": "https://github.com/jeffdaily/parasail", + "rel": "/software/repository/github/jeffdaily/parasail", + "avatar": "https://avatars.githubusercontent.com/u/904248?v=4", + "description": "Pairwise Sequence Alignment Library", "topics": [] }, { - "uid": "github/comprna/reorientexpress", - "url": "https://github.com/comprna/reorientexpress", - "rel": "/software/repository/github/comprna/reorientexpress", - "avatar": "https://avatars0.githubusercontent.com/u/23315864?v=4", - "description": "Transcriptome long-read orientation with Deep Learning", + "uid": "github/temuller/hostphot", + "url": "https://github.com/temuller/hostphot", + "rel": "/software/repository/github/temuller/hostphot", + "avatar": "https://avatars.githubusercontent.com/u/20286110?v=4", + "description": "HostPhot: global and local photometry of galaxies hosting supernovae or other transients", "topics": [ - "long-read-sequencing", - "nanopore-sequencing", - "deep-learning", - "convolutional-neural-networks", - "multilayer-perceptron-network", - "machine-learning" + "cosmology", + "supernova", + "galaxy", + "python", + "photometry", + "sep", + "sextractor", + "transients" ] }, { - "uid": "github/comprna/SUPPA", - "url": "https://github.com/comprna/SUPPA", - "rel": "/software/repository/github/comprna/SUPPA", - "avatar": "https://avatars.githubusercontent.com/u/23315864?v=4", - "description": " SUPPA2: Fast quantification of differential splicing ", + "uid": "github/temuller/piscola", + "url": "https://github.com/temuller/piscola", + "rel": "/software/repository/github/temuller/piscola", + "avatar": "https://avatars.githubusercontent.com/u/20286110?v=4", + "description": "Supernova light-curve fitting code", "topics": [ - "psi-calculation", - "splicing-quantification", - "differential-splicing-analysis", - "transcript-isoform", - "psi-values", - "clustered-events", - "inclusion-level" + "python", + "supernova", + "lightcurves", + "gaussian-processes", + "reproducible-science", + "data-science", + "data-driven", + "supernovae" ] }, { - "uid": "github/infer-actively/pymdp", - "url": "https://github.com/infer-actively/pymdp", - "rel": "/software/repository/github/infer-actively/pymdp", - "avatar": "https://avatars.githubusercontent.com/u/75545318?v=4", - "description": "A Python implementation of active inference for Markov Decision Processes", - "topics": [] - }, - { - "uid": "github/SimVascular/svZeroDSolver", - "url": "https://github.com/SimVascular/svZeroDSolver", - "rel": "/software/repository/github/SimVascular/svZeroDSolver", - "avatar": "https://avatars.githubusercontent.com/u/13788322?v=4", - "description": "A C++ lumped-parameter solver for blood flow and pressure in hemodynamic networks", + "uid": "github/MASILab/pyPheWAS", + "url": "https://github.com/MASILab/pyPheWAS", + "rel": "/software/repository/github/MASILab/pyPheWAS", + "avatar": "https://avatars.githubusercontent.com/u/34776698?v=4", + "description": "MASI Lab Implementation of PheWAS in Python", "topics": [] }, { - "uid": "github/pikarpov-LANL/Sapsan", - "url": "https://github.com/pikarpov-LANL/Sapsan", - "rel": "/software/repository/github/pikarpov-LANL/Sapsan", - "avatar": "https://avatars.githubusercontent.com/u/57731529?v=4", - "description": "ML-based turbulence modeling for astrophysics", + "uid": "github/ChemaPalencia/M_SMiLe", + "url": "https://github.com/ChemaPalencia/M_SMiLe", + "rel": "/software/repository/github/ChemaPalencia/M_SMiLe", + "avatar": "https://avatars.githubusercontent.com/u/100603350?v=4", + "description": "Code to provide approximate magnification probability distributions under microlensing by compact objects such as stars or PBHs of strongly lensed stars.", "topics": [ - "turbulence", - "astrophysics", - "machine-learning" + "dark-matter", + "gravitational-lensing", + "microlensing", + "primordial-black-holes", + "strong-lensing", + "high-redshift-stars" ] }, { - "uid": "github/jpmens/jo", - "url": "https://github.com/jpmens/jo", - "rel": "/software/repository/github/jpmens/jo", - "avatar": "https://avatars.githubusercontent.com/u/60706?v=4", - "description": "JSON output from a shell", - "topics": [] - }, - { - "uid": "github/moble/scri", - "url": "https://github.com/moble/scri", - "rel": "/software/repository/github/moble/scri", - "avatar": "https://avatars.githubusercontent.com/u/1470769?v=4", - "description": "Python/numba code for manipulating time-dependent functions of spin-weighted spherical harmonics", + "uid": "github/smirik/resonances", + "url": "https://github.com/smirik/resonances", + "rel": "/software/repository/github/smirik/resonances", + "avatar": "https://avatars.githubusercontent.com/u/354907?v=4", + "description": "A python package for identification of mean-motion resonances in the Solar system and other planetary systems.", "topics": [ "astronomy", - "gravitational-waves", - "python" + "mean-motion-resonance", + "solar-system-simulation" ] }, { - "uid": "github/moble/GWFrames", - "url": "https://github.com/moble/GWFrames", - "rel": "/software/repository/github/moble/GWFrames", - "avatar": "https://avatars.githubusercontent.com/u/1470769?v=4", - "description": "Manipulate gravitational waveforms\u2014changing frames, and so on.", + "uid": "github/nombac/optab", + "url": "https://github.com/nombac/optab", + "rel": "/software/repository/github/nombac/optab", + "avatar": "https://avatars.githubusercontent.com/u/38897846?v=4", + "description": "Public Fortran90 code package for generating ideal-gas opacity tables", "topics": [] }, { - "uid": "github/damcb/tyssue", - "url": "https://github.com/DamCB/tyssue", - "rel": "/software/repository/github/damcb/tyssue", - "avatar": "https://avatars.githubusercontent.com/u/7861101?v=4", - "description": "An epithelium simulation library", - "topics": [ - "vertex", - "pandas", - "biological-simulations", - "geometry", - "notebook" - ] - }, - { - "uid": "github/recipy/recipy", - "url": "https://github.com/recipy/recipy", - "rel": "/software/repository/github/recipy/recipy", - "avatar": "https://avatars2.githubusercontent.com/u/11677462?v=4", - "description": "Effortless method to record provenance in Python", - "topics": [ - "python", - "recipy", - "science", - "reproducible-research", - "database", - "provenance" - ] + "uid": "github/putonti/virmine", + "url": "https://github.com/putonti/virMine", + "rel": "/software/repository/github/putonti/virmine", + "avatar": "https://avatars.githubusercontent.com/u/10090771?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Nicholaswogan/photochem", - "url": "https://github.com/Nicholaswogan/photochem", - "rel": "/software/repository/github/Nicholaswogan/photochem", - "avatar": "https://avatars.githubusercontent.com/u/18489667?v=4", - "description": "A chemical model of planetary atmospheres", + "uid": "github/JuliaOcean/AIBECS.jl", + "url": "https://github.com/JuliaOcean/AIBECS.jl", + "rel": "/software/repository/github/JuliaOcean/AIBECS.jl", + "avatar": "https://avatars.githubusercontent.com/u/41747359?v=4", + "description": "The ideal tool for exploring global marine biogeochemical cycles.", "topics": [ - "photochemistry", - "photochemical-model", - "earth-science", - "atmosphere", - "cython", - "fortran", - "python", - "exoplanets", - "astrobiology" + "ocean", + "oceanography", + "ocean-circulation", + "modeling", + "model", + "models", + "global", + "optimization", + "inverse-model", + "marine", + "marine-tracer", + "tracer", + "transport", + "julia", + "awesome", + "biogeochemistry", + "biogeochemical", + "biogeochemical-model", + "pathways", + "fluxes" ] }, { - "uid": "github/Nicholaswogan/PhotochemPy", - "url": "https://github.com/Nicholaswogan/PhotochemPy", - "rel": "/software/repository/github/Nicholaswogan/PhotochemPy", - "avatar": "https://avatars.githubusercontent.com/u/18489667?v=4", - "description": "Photochemical model of rocky planet's atmospheres.", - "topics": [ - "fortran-source", - "photochemical-model", - "atmosphere", - "python" - ] + "uid": "github/JuliaOcean/PlanktonIndividuals.jl", + "url": "https://github.com/JuliaOcean/PlanktonIndividuals.jl", + "rel": "/software/repository/github/JuliaOcean/PlanktonIndividuals.jl", + "avatar": "https://avatars.githubusercontent.com/u/41747359?v=4", + "description": "This package simulates the behaviors of an ensemble of phytoplankton individuals.", + "topics": [] }, { - "uid": "github/AOtools/aotools", - "url": "https://github.com/AOtools/aotools", - "rel": "/software/repository/github/AOtools/aotools", - "avatar": "https://avatars.githubusercontent.com/u/17499079?v=4", - "description": "A useful set of tools for Adaptive Optics in Python", - "topics": [ - "adaptive-optics", - "python", - "astronomy-library", - "python-package" - ] + "uid": "github/zkdtc/MLC_ELGs", + "url": "https://github.com/zkdtc/MLC_ELGs", + "rel": "/software/repository/github/zkdtc/MLC_ELGs", + "avatar": "https://avatars.githubusercontent.com/u/26392765?v=4", + "description": "Machine Learning Classifiers for intermediate redshift Emission Line Galaxies", + "topics": [] }, { - "uid": "github/hsergi/Roman_Coronagraph_ETC", - "url": "https://github.com/hsergi/Roman_Coronagraph_ETC", - "rel": "/software/repository/github/hsergi/Roman_Coronagraph_ETC", - "avatar": "https://avatars.githubusercontent.com/u/883244?v=4", - "description": "Exposure Time Calculator for the Roman Coronagraph Instrument", + "uid": "github/samwaseda/mamonca", + "url": "https://github.com/samwaseda/mamonca", + "rel": "/software/repository/github/samwaseda/mamonca", + "avatar": "https://avatars.githubusercontent.com/u/37879103?v=4", + "description": null, "topics": [] }, { - "uid": "github/HUST-DataMan/FRMC", - "url": "https://github.com/HUST-DataMan/FRMC", - "rel": "/software/repository/github/HUST-DataMan/FRMC", - "avatar": "https://avatars.githubusercontent.com/u/75129706?v=4", - "description": "FRMC is a fast and robust imputation software for single cell RNA-Seq data.", + "uid": "github/snystrom/memes", + "url": "https://github.com/snystrom/memes", + "rel": "/software/repository/github/snystrom/memes", + "avatar": "https://avatars.githubusercontent.com/u/17264973?v=4", + "description": "An R interface to the MEME Suite", "topics": [] }, { - "uid": "github/amueller/word_cloud", - "url": "https://github.com/amueller/word_cloud", - "rel": "/software/repository/github/amueller/word_cloud", - "avatar": "https://avatars.githubusercontent.com/u/449558?v=4", - "description": "A little word cloud generator in Python", + "uid": "github/JSB-UCLA/scPNMF", + "url": "https://github.com/JSB-UCLA/scPNMF", + "rel": "/software/repository/github/JSB-UCLA/scPNMF", + "avatar": "https://avatars.githubusercontent.com/u/70451103?v=4", + "description": null, "topics": [] }, { - "uid": "github/SynxFlow/SynxFlow", - "url": "https://github.com/SynxFlow/SynxFlow", - "rel": "/software/repository/github/SynxFlow/SynxFlow", - "avatar": "https://avatars.githubusercontent.com/u/145569668?v=4", - "description": "Simulates flood, landslide and debris flow dynamically using GPUs", - "topics": [ - "debrisflow", - "flood", - "landslide", - "modelling" - ] - }, - { - "uid": "github/gokalpcelik/ROHMMCLI", - "url": "https://github.com/gokalpcelik/ROHMMCLI", - "rel": "/software/repository/github/gokalpcelik/ROHMMCLI", - "avatar": "https://avatars.githubusercontent.com/u/37572619?v=4", - "description": "ROHMMCLI - Flexible HMM based homozygosity predictor.", - "topics": [ - "science-research", - "next-generation-sequencing", - "genotyping", - "homozygosity" - ] + "uid": "github/moustakas/iSEDfit", + "url": "https://github.com/moustakas/iSEDfit", + "rel": "/software/repository/github/moustakas/iSEDfit", + "avatar": "https://avatars.githubusercontent.com/u/1431820?v=4", + "description": "iSEDfit is a Bayesian spectral energy distribution fitting code designed to extract the physical properties of galaxies from broadband photometry.", + "topics": [] }, { - "uid": "github/kolikem/loma", - "url": "https://github.com/kolikem/loma", - "rel": "/software/repository/github/kolikem/loma", - "avatar": "https://avatars.githubusercontent.com/u/100743374?v=4", + "uid": "github/adammoss/supernovae", + "url": "https://github.com/adammoss/supernovae", + "rel": "/software/repository/github/adammoss/supernovae", + "avatar": "https://avatars.githubusercontent.com/u/3430494?v=4", "description": null, "topics": [] }, { - "uid": "github/FofanovLab/mtsv_tools", - "url": "https://github.com/FofanovLab/mtsv_tools", - "rel": "/software/repository/github/FofanovLab/mtsv_tools", - "avatar": "https://avatars.githubusercontent.com/u/33037734?v=4", - "description": "Core metagenomic binning tools for mtsv", + "uid": "github/isglobal-brge/dsExposome", + "url": "https://github.com/isglobal-brge/dsExposome", + "rel": "/software/repository/github/isglobal-brge/dsExposome", + "avatar": "https://avatars.githubusercontent.com/u/22591681?v=4", + "description": "DataSHIELD server functions for the exposome data analysis", "topics": [] }, { - "uid": "github/r-cas/caracas", - "url": "https://github.com/r-cas/caracas", - "rel": "/software/repository/github/r-cas/caracas", - "avatar": "https://avatars.githubusercontent.com/u/58435783?v=4", - "description": "Computer algebra in R", + "uid": "github/scrook/neuroml-db", + "url": "https://github.com/scrook/neuroml-db", + "rel": "/software/repository/github/scrook/neuroml-db", + "avatar": "https://avatars.githubusercontent.com/u/2678602?v=4", + "description": "database of neuroml models", "topics": [] }, { - "uid": "github/stedolan/jq", - "url": "https://github.com/stedolan/jq", - "rel": "/software/repository/github/stedolan/jq", - "avatar": "https://avatars.githubusercontent.com/u/79765?v=4", - "description": "Command-line JSON processor", - "topics": [] + "uid": "github/dmentipl/plonk", + "url": "https://github.com/dmentipl/plonk", + "rel": "/software/repository/github/dmentipl/plonk", + "avatar": "https://avatars.githubusercontent.com/u/8281189?v=4", + "description": "Smoothed particle hydrodynamics analysis and visualization with Python.", + "topics": [ + "smoothed-particle-hydrodynamics", + "python", + "astronomy", + "visualization" + ] }, { - "uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", - "url": "https://github.com/sunnyvagnozzi/Braneworld-extra-dimensions", - "rel": "/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", - "avatar": "https://avatars.githubusercontent.com/u/18328923?v=4", - "description": null, + "uid": "github/zhang-zhixiang/spectool", + "url": "https://github.com/zhang-zhixiang/spectool", + "rel": "/software/repository/github/zhang-zhixiang/spectool", + "avatar": "https://avatars.githubusercontent.com/u/12471308?v=4", + "description": "spectool is a collection of common reduction functions for spectroscopic data, providing tools for rebinning, smoothing, normalization, radial velocity measurement, and more.", "topics": [] }, { - "uid": "github/johannesulf/dsigma", - "url": "https://github.com/johannesulf/dsigma", - "rel": "/software/repository/github/johannesulf/dsigma", - "avatar": "https://avatars.githubusercontent.com/u/4167911?v=4", - "description": "A Galaxy-Galaxy Lensing Python Package", + "uid": "github/zhang-zhixiang/stellarSpecModel", + "url": "https://github.com/zhang-zhixiang/stellarSpecModel", + "rel": "/software/repository/github/zhang-zhixiang/stellarSpecModel", + "avatar": "https://avatars.githubusercontent.com/u/12471308?v=4", + "description": "This is a simple package to interpolate the stellar spectral grid. Users provide a group of stellar parameters (Teff, FeH, logg), the package will return the corresponding stellar spectrum.", "topics": [] }, { - "uid": "github/melobio/Attune", - "url": "https://github.com/melobio/Attune", - "rel": "/software/repository/github/melobio/Attune", - "avatar": "https://avatars.githubusercontent.com/u/82862879?v=4", - "description": null, + "uid": "github/emhuff/Balrog", + "url": "https://github.com/emhuff/Balrog", + "rel": "/software/repository/github/emhuff/Balrog", + "avatar": "https://avatars.githubusercontent.com/u/2623781?v=4", + "description": "DES image simulation software: We dug too deeply and too greedily", "topics": [] }, { - "uid": "github/maserlib/ExPRES", - "url": "https://github.com/maserlib/ExPRES", - "rel": "/software/repository/github/maserlib/ExPRES", - "avatar": "https://avatars.githubusercontent.com/u/22966577?v=4", - "description": "Exoplanetary and Planetary Radio Emission Simulator", + "uid": "github/johnh2o2/cuvarbase", + "url": "https://github.com/johnh2o2/cuvarbase", + "rel": "/software/repository/github/johnh2o2/cuvarbase", + "avatar": "https://avatars.githubusercontent.com/u/5678551?v=4", + "description": "Python library for fast time-series analysis on CUDA GPUs", "topics": [ - "uws", - "idl", - "radio-astronomy", - "jupiter", - "padc" + "time-series", + "nfft", + "lomb-scargle-periodogram", + "fourier-methods", + "cuda", + "python", + "python-3", + "gpu-computing", + "gpu" ] }, { - "uid": "github/mcfrith/dnarrange", - "url": "https://github.com/mcfrith/dnarrange", - "rel": "/software/repository/github/mcfrith/dnarrange", - "avatar": "https://avatars.githubusercontent.com/u/17116542?v=4", - "description": "Method to find rearrangements in long DNA reads relative to a genome seq", + "uid": "github/prolfqua/prolfquapp", + "url": "https://github.com/prolfqua/prolfquapp", + "rel": "/software/repository/github/prolfqua/prolfquapp", + "avatar": "https://avatars.githubusercontent.com/u/164514960?v=4", + "description": "Generating Dynamic DEA Reports with the prolfqua R Package", "topics": [] }, { - "uid": "github/mcfrith/tandem-genotypes", - "url": "https://github.com/mcfrith/tandem-genotypes", - "rel": "/software/repository/github/mcfrith/tandem-genotypes", - "avatar": "https://avatars.githubusercontent.com/u/17116542?v=4", - "description": "compare lengths of duplications in DNA sequences", + "uid": "github/pontoppi/radlite", + "url": "https://github.com/pontoppi/radlite", + "rel": "/software/repository/github/pontoppi/radlite", + "avatar": "https://avatars.githubusercontent.com/u/3697922?v=4", + "description": "RADLite is the fast 2D/3D raytracer for infrared lines", "topics": [] }, { - "uid": "github/fair-data/fairdatapoint-client", - "url": "https://github.com/fair-data/fairdatapoint-client", - "rel": "/software/repository/github/fair-data/fairdatapoint-client", - "avatar": "https://avatars.githubusercontent.com/u/78078886?v=4", - "description": "Interact with your resources (catalogs/datasets/distributions) in a FDP using python", + "uid": "github/pontoppi/ctool", + "url": "https://github.com/pontoppi/ctool", + "rel": "/software/repository/github/pontoppi/ctool", + "avatar": "https://avatars.githubusercontent.com/u/3697922?v=4", + "description": null, "topics": [] }, { - "uid": "github/NicOudart/PyBWE", - "url": "https://github.com/NicOudart/PyBWE", - "rel": "/software/repository/github/NicOudart/PyBWE", - "avatar": "https://avatars.githubusercontent.com/u/152175898?v=4", - "description": "Python library for radar Bandwidth Extrapolation (BWE)", + "uid": "github/tolkit/telomeric-identifier", + "url": "https://github.com/tolkit/telomeric-identifier", + "rel": "/software/repository/github/tolkit/telomeric-identifier", + "avatar": "https://avatars.githubusercontent.com/u/67783554?v=4", + "description": "Identify and find telomeres, or telomeric repeats in a genome.", "topics": [ - "astronomy", - "astrophysics", - "bandwidth", - "bwe", - "extrapolation", - "planetary-science", - "radar", - "resolution", - "sounder", - "pybwe" + "genome", + "rust", + "telomere", + "repeats", + "telomeric", + "telomeres", + "bioinformatics" ] }, { - "uid": "github/tessgi/tvguide", - "url": "https://github.com/tessgi/tvguide", - "rel": "/software/repository/github/tessgi/tvguide", - "avatar": "https://avatars.githubusercontent.com/u/27449508?v=4", - "description": "A tool for determining whether stars and galaxies are observable by TESS.", + "uid": "github/pyxnat/pyxnat", + "url": "https://github.com/pyxnat/pyxnat", + "rel": "/software/repository/github/pyxnat/pyxnat", + "avatar": "https://avatars.githubusercontent.com/u/809417?v=4", + "description": "XNAT in Python", "topics": [] }, { - "uid": "github/gbernstein/gbdes", - "url": "https://github.com/gbernstein/gbdes", - "rel": "/software/repository/github/gbernstein/gbdes", - "avatar": "https://avatars.githubusercontent.com/u/1461152?v=4", - "description": "Gary's DES instrumental signature removal / fitting programs", + "uid": "github/SpyDust/SpyDust", + "url": "https://github.com/SpyDust/SpyDust", + "rel": "/software/repository/github/SpyDust/SpyDust", + "avatar": "https://avatars.githubusercontent.com/u/187758865?v=4", + "description": "An improved implementation of SPDust for modeling spinning dust radiation", "topics": [] }, { - "uid": "github/gbernstein/pixmappy", - "url": "https://github.com/gbernstein/pixmappy", - "rel": "/software/repository/github/gbernstein/pixmappy", - "avatar": "https://avatars.githubusercontent.com/u/1461152?v=4", - "description": "Python interface to gbdes pixel map (astrometry) solutions", + "uid": "github/JuliaGeometry/DelaunayTriangulation.jl", + "url": "https://github.com/JuliaGeometry/DelaunayTriangulation.jl", + "rel": "/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", + "avatar": "https://avatars.githubusercontent.com/u/10924607?v=4", + "description": "DelaunayTriangulation.jl: A Julia package for Delaunay triangulations and Voronoi tessellations in the plane", + "topics": [ + "delaunay-triangulation", + "tessellation", + "triangulation", + "computational-geometry", + "geometry", + "voronoi", + "voronoi-diagram", + "delaunay", + "meshing", + "power-diagram" + ] + }, + { + "uid": "github/Dfam-consortium/RepeatModeler", + "url": "https://github.com/Dfam-consortium/RepeatModeler", + "rel": "/software/repository/github/Dfam-consortium/RepeatModeler", + "avatar": "https://avatars0.githubusercontent.com/u/40807771?v=4", + "description": "De-Novo Repeat Discovery Tool", "topics": [] }, { - "uid": "github/ProfessorBrunner/rc3-pipeline", - "url": "https://github.com/ProfessorBrunner/rc3-pipeline", - "rel": "/software/repository/github/ProfessorBrunner/rc3-pipeline", - "avatar": "https://avatars.githubusercontent.com/u/2030065?v=4", - "description": "Make digital images of RC3 galaxies by using final, calibrated SDSS images", + "uid": "github/dvallesp/vortex", + "url": "https://github.com/dvallesp/vortex", + "rel": "/software/repository/github/dvallesp/vortex", + "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", + "description": "Implements Helmholtz-Hodge decomposition for an AMR velocity field", "topics": [] }, { - "uid": "github/netrias/rnassist", - "url": "https://github.com/netrias/rnassist", - "rel": "/software/repository/github/netrias/rnassist", - "avatar": "https://avatars.githubusercontent.com/u/31782484?v=4", - "description": null, + "uid": "github/dvallesp/asohf", + "url": "https://github.com/dvallesp/ASOHF", + "rel": "/software/repository/github/dvallesp/asohf", + "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", + "description": "Adaptive Spherical Overdensity Halo Finder (Planelles & Quilis, 2010. A&A, 519:A94; Vall\u00e9s-P\u00e9rez, Planelles & Quilis, 2022. A&A in press)", "topics": [] }, { - "uid": "github/childmindresearch/wristpy", - "url": "https://github.com/childmindresearch/wristpy", - "rel": "/software/repository/github/childmindresearch/wristpy", - "avatar": "https://avatars.githubusercontent.com/u/132617703?v=4", - "description": "A Python package for wrist-worn accelerometer data processing.", + "uid": "github/dvallesp/vortex-p", + "url": "https://github.com/dvallesp/vortex-p", + "rel": "/software/repository/github/dvallesp/vortex-p", + "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", + "description": "Implements a Helmholtz-Hodge decomposition and a Reynolds decomposition for the velocity field of general particle-based simulation outputs", "topics": [] }, { - "uid": "github/childmindresearch/actisleep-tracker", - "url": "https://github.com/childmindresearch/actisleep-tracker", - "rel": "/software/repository/github/childmindresearch/actisleep-tracker", - "avatar": "https://avatars.githubusercontent.com/u/132617703?v=4", - "description": "A webapp for annotating actigraphy data", - "topics": [ - "actigraphy" - ] + "uid": "github/nexml/nexml.java", + "url": "https://github.com/nexml/nexml.java", + "rel": "/software/repository/github/nexml/nexml.java", + "avatar": "https://avatars.githubusercontent.com/u/1506716?v=4", + "description": "Java API for NeXML.", + "topics": [] }, { - "uid": "github/ColdThunder/NR-code", - "url": "https://github.com/ColdThunder/NR-code", - "rel": "/software/repository/github/ColdThunder/NR-code", - "avatar": "https://avatars.githubusercontent.com/u/3037902?v=4", - "description": "Nonlinear reconstruction code", + "uid": "github/fwhigh/stellar-locus-regression", + "url": "https://github.com/fwhigh/stellar-locus-regression", + "rel": "/software/repository/github/fwhigh/stellar-locus-regression", + "avatar": "https://avatars.githubusercontent.com/u/3476531?v=4", + "description": "Automatically exported from code.google.com/p/stellar-locus-regression", "topics": [] }, { - "uid": "github/lysovosyl/NanoDeep", - "url": "https://github.com/lysovosyl/NanoDeep", - "rel": "/software/repository/github/lysovosyl/NanoDeep", - "avatar": "https://avatars.githubusercontent.com/u/133856851?v=4", + "uid": "github/vishwas1984/LaplaceInterpolation.jl", + "url": "https://github.com/vishwas1984/LaplaceInterpolation.jl", + "rel": "/software/repository/github/vishwas1984/LaplaceInterpolation.jl", + "avatar": "https://avatars.githubusercontent.com/u/29146465?v=4", "description": null, "topics": [] }, { - "uid": "github/gaelforget/MITgcm.jl", - "url": "https://github.com/gaelforget/MITgcm.jl", - "rel": "/software/repository/github/gaelforget/MITgcm.jl", - "avatar": "https://avatars.githubusercontent.com/u/20276764?v=4", - "description": "Julia interface to MITgcm", + "uid": "github/intake/intake", + "url": "https://github.com/intake/intake", + "rel": "/software/repository/github/intake/intake", + "avatar": "https://avatars.githubusercontent.com/u/1469464?v=4", + "description": "Intake is a lightweight package for finding, investigating, loading and disseminating data.", "topics": [ - "adjoint", - "adjoint-sensitivities", - "biogeochemistry", - "climate", - "climate-model", - "climate-science", - "ecology", - "model", - "ocean", - "ocean-modelling", - "ocean-sciences", - "particles", - "seaice", - "tracers", - "transport" + "python", + "data-access", + "data-catalog" ] }, { - "uid": "github/HKU-BAL/Clair3", - "url": "https://github.com/HKU-BAL/Clair3", - "rel": "/software/repository/github/HKU-BAL/Clair3", - "avatar": "https://avatars.githubusercontent.com/u/13270645?v=4", - "description": "Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling", + "uid": "github/simonbesnard1/gedidb", + "url": "https://github.com/simonbesnard1/gedidb", + "rel": "/software/repository/github/simonbesnard1/gedidb", + "avatar": "https://avatars.githubusercontent.com/u/162727763?v=4", + "description": "A toolbox for processing and providing Global Ecosystem Dynamics Investigation (GEDI) L2A-B and L4A-C data", "topics": [ - "deep-learning", - "variant-calling", - "computational-biology", - "nanopore", - "long-reads", - "genomics", - "ont-data", - "ont-models", - "illumina", - "pacbio", - "variant-detection" + "gedi", + "python", + "remote-sensing", + "tiledb" ] }, { - "uid": "github/bretthandrews/flexCE", - "url": "https://github.com/bretthandrews/flexce", - "rel": "/software/repository/github/bretthandrews/flexCE", - "avatar": "https://avatars.githubusercontent.com/u/12723826?v=4", - "description": "A flexible Chemical Evolution model in python", - "topics": [] - }, - { - "uid": "github/sdnjly/WSDL-AD", - "url": "https://github.com/sdnjly/WSDL-AD", - "rel": "/software/repository/github/sdnjly/WSDL-AD", - "avatar": "https://avatars.githubusercontent.com/u/6623062?v=4", + "uid": "github/girder/viime", + "url": "https://github.com/girder/viime", + "rel": "/software/repository/github/girder/viime", + "avatar": "https://avatars2.githubusercontent.com/u/5150517?v=4", "description": null, "topics": [] }, { - "uid": "github/ec-jrc/nrt", - "url": "https://github.com/ec-jrc/nrt", - "rel": "/software/repository/github/ec-jrc/nrt", - "avatar": "https://avatars.githubusercontent.com/u/39263635?v=4", - "description": "Near Real Time monitoring of satellite image time-series", - "topics": [ - "anomalies-detection", - "sentinel-2", - "monitoring", - "datacube", - "forest-disturbances" - ] + "uid": "github/galactic-ai/haloflow", + "url": "https://github.com/galactic-ai/haloflow", + "rel": "/software/repository/github/galactic-ai/haloflow", + "avatar": "https://avatars.githubusercontent.com/u/180338519?v=4", + "description": "Simulation-Based Inference (SBI) using forward modeled galaxy photometry", + "topics": [] }, { - "uid": "github/materialsproject/pymatgen-analysis-defects", - "url": "https://github.com/materialsproject/pymatgen-analysis-defects", - "rel": "/software/repository/github/materialsproject/pymatgen-analysis-defects", - "avatar": "https://avatars.githubusercontent.com/u/867057?v=4", - "description": "Defect analysis modules for pymatgen", + "uid": "github/SysBioUAB/hpi_predictor", + "url": "https://github.com/SysBioUAB/hpi_predictor", + "rel": "/software/repository/github/SysBioUAB/hpi_predictor", + "avatar": "https://avatars.githubusercontent.com/u/78474998?v=4", + "description": "Bash+R tool to predict host-pathogen protein-protein interactions based on numerical encoding of physicochemical descriptors", "topics": [] }, { - "uid": "github/Degiacomi-Lab/molearn", - "url": "https://github.com/Degiacomi-Lab/molearn", - "rel": "/software/repository/github/Degiacomi-Lab/molearn", - "avatar": "https://avatars.githubusercontent.com/u/102035266?v=4", - "description": "protein conformational spaces meet machine learning", - "topics": [ - "machine-learning", - "molecular-dynamics", - "molecular-modeling", - "protein-structure" - ] + "uid": "github/james-trayford/strauss", + "url": "https://github.com/james-trayford/strauss", + "rel": "/software/repository/github/james-trayford/strauss", + "avatar": "https://avatars.githubusercontent.com/u/25175083?v=4", + "description": "Sonification Tools and Resources for Analysis Using Sound Synthesis", + "topics": [] }, { - "uid": "github/bge-barcoding/gene_fetch", - "url": "https://github.com/bge-barcoding/gene_fetch", - "rel": "/software/repository/github/bge-barcoding/gene_fetch", - "avatar": "https://avatars.githubusercontent.com/u/157588017?v=4", - "description": "A Python tool for high-throughput retrieval of protein and/or gene sequences from NCBI GenBank for single or multiple taxa.", + "uid": "github/HUPO-PSI/mzspeclib-py", + "url": "https://github.com/HUPO-PSI/mzspeclib-py", + "rel": "/software/repository/github/HUPO-PSI/mzspeclib-py", + "avatar": "https://avatars.githubusercontent.com/u/11966779?v=4", + "description": "A python reference implementation of the mzSpecLib spectral library format", "topics": [] }, { - "uid": "github/surf-eds/one-button-compute", - "url": "https://github.com/surf-eds/one-button-compute", - "rel": "/software/repository/github/surf-eds/one-button-compute", - "avatar": "https://avatars1.githubusercontent.com/u/14886505?v=4", - "description": "Web API for dynamic compute", + "uid": "github/leonardlab/COMET", + "url": "https://github.com/leonardlab/COMET", + "rel": "/software/repository/github/leonardlab/COMET", + "avatar": "https://avatars.githubusercontent.com/u/46577112?v=4", + "description": "The COMET toolkit for composing customizable genetic programs in mammalian cells", "topics": [] }, { - "uid": "github/FengTaoSMU/MOBFinder", - "url": "https://github.com/FengTaoSMU/MOBFinder", - "rel": "/software/repository/github/FengTaoSMU/MOBFinder", - "avatar": "https://avatars.githubusercontent.com/u/104297870?v=4", - "description": "MOB typing for plasmid metagenomic fragments", + "uid": "github/kieranatkins/silique-detector", + "url": "https://github.com/kieranatkins/silique-detector", + "rel": "/software/repository/github/kieranatkins/silique-detector", + "avatar": "https://avatars.githubusercontent.com/u/22368431?v=4", + "description": "Model weights, inference code and phenotyping code associated with the paper \"Deep Learning Phenotyping of Arabidopsis Fruits with QTL Analysis Verification\" by Atkins et al.", "topics": [] }, { - "uid": "github/shbhuk/mrexo", - "url": "https://github.com/shbhuk/mrexo", - "rel": "/software/repository/github/shbhuk/mrexo", - "avatar": "https://avatars.githubusercontent.com/u/25436514?v=4", - "description": "Non parametric Mass - Radius relationship for exoplanets", + "uid": "github/kieranatkins/gimp-image-annotator", + "url": "https://github.com/kieranatkins/gimp-image-annotator", + "rel": "/software/repository/github/kieranatkins/gimp-image-annotator", + "avatar": "https://avatars.githubusercontent.com/u/22368431?v=4", + "description": "A GIMP plug-in to allow for direct generation of semantic segementation masks for use in machine learning projects, using the power of the GIMP selection tools.", "topics": [] }, { - "uid": "github/shbhuk/barycorrpy", - "url": "https://github.com/shbhuk/barycorrpy", - "rel": "/software/repository/github/shbhuk/barycorrpy", - "avatar": "https://avatars.githubusercontent.com/u/25436514?v=4", - "description": "Python version of Barycorr", - "topics": [] + "uid": "github/cwieder/py-ssPA", + "url": "https://github.com/cwieder/py-ssPA", + "rel": "/software/repository/github/cwieder/py-ssPA", + "avatar": "https://avatars.githubusercontent.com/u/59842155?v=4", + "description": "Single sample pathway analysis tools for omics data", + "topics": [ + "bioinformatics", + "identifier-mapping", + "pathway-analysis", + "pathway-enrichment-analysis", + "pathway-databases", + "metabolomics", + "omics" + ] }, { - "uid": "github/zjupgx/modig", - "url": "https://github.com/zjupgx/modig", - "rel": "/software/repository/github/zjupgx/modig", - "avatar": "https://avatars.githubusercontent.com/u/94656251?v=4", - "description": "MODIG: Integrating Multi-Omics and Multi-Dimensional Gene Network for Cancer Driver Gene Identification based on Graph Attention Network Model", + "uid": "github/mbonav/Exo_DMC", + "url": "https://github.com/mbonav/Exo_DMC", + "rel": "/software/repository/github/mbonav/Exo_DMC", + "avatar": "https://avatars.githubusercontent.com/u/34315578?v=4", + "description": "Exoplanet Detection Map Calculator ", "topics": [] }, { - "uid": "github/miguelcarcamov/csromer", - "url": "https://github.com/miguelcarcamov/csromer", - "rel": "/software/repository/github/miguelcarcamov/csromer", - "avatar": "https://avatars.githubusercontent.com/u/5432126?v=4", - "description": "Compressive Sensing and Optimization Framework to reconstruct Faraday Depth signals", + "uid": "github/tensorly/viz", + "url": "https://github.com/tensorly/viz", + "rel": "/software/repository/github/tensorly/viz", + "avatar": "https://avatars.githubusercontent.com/u/22989719?v=4", + "description": "Easy visualization and evaluation of matrix and tensor factorization models", "topics": [ - "faraday-rotation", - "faraday-depth", - "compressed-sensing", - "python", - "framework", - "linear-polarization", - "object-oriented", - "object-oriented-programming", - "faraday-tomography", - "signal-reconstruction", - "magnetic-fields", - "astronomy-astrophysics", - "astrophysics" + "tensor-methods", + "tensorly", + "tensors", + "visualization" ] }, { - "uid": "github/miguelcarcamov/gpuvmem", - "url": "https://github.com/miguelcarcamov/gpuvmem", - "rel": "/software/repository/github/miguelcarcamov/gpuvmem", - "avatar": "https://avatars.githubusercontent.com/u/5432126?v=4", - "description": "GPU Framework for Radio Astronomical Image Synthesis", + "uid": "github/yrkhalil/SPIBACK", + "url": "https://github.com/yrkhalil/SPIBACK", + "rel": "/software/repository/github/yrkhalil/SPIBACK", + "avatar": "https://avatars.githubusercontent.com/u/126723765?v=4", + "description": "Backward-integration-based non-axisymmetric models of the Milky Way disk", "topics": [ - "telescope", - "gpu-computing", - "gpu-acceleration", - "multi-gpu", - "alma", - "ska", - "vla", - "astronomical-images", - "astronomy", - "astrophysics", - "optimization-methods", - "complex-systems", - "radioastronomy", - "maximum-entropy", - "astronomical-algorithms", - "image-synthesis", - "cuda", - "radio-imaging", - "radio-interferometry", - "gpu" + "astronomy-astrophysics", + "milky-way-galaxy" ] }, { - "uid": "github/joacoh/wise2mbh", - "url": "https://github.com/joacoh/wise2mbh", - "rel": "/software/repository/github/joacoh/wise2mbh", - "avatar": "https://avatars.githubusercontent.com/u/86896662?v=4", - "description": "WISE2MBH is a simple an effective algorithm that uses infrared cataloged data from the Wide-field Infrared Survey Explorer (WISE) to estimate the mass of super massive black holes (SMBH)", + "uid": "github/LiuJJ0327/CCPE", + "url": "https://github.com/LiuJJ0327/CCPE", + "rel": "/software/repository/github/LiuJJ0327/CCPE", + "avatar": "https://avatars.githubusercontent.com/u/49144614?v=4", + "description": "Cell cycle pseudotome estimation for scRNA-seq data", "topics": [] }, { - "uid": "github/samuelmurail/af_analysis", - "url": "https://github.com/samuelmurail/af_analysis", - "rel": "/software/repository/github/samuelmurail/af_analysis", - "avatar": "https://avatars.githubusercontent.com/u/31649605?v=4", - "description": " Analysis of alphafold and colabfold results", - "topics": [] + "uid": "github/gnudatalanguage/gdl", + "url": "https://github.com/gnudatalanguage/gdl", + "rel": "/software/repository/github/gnudatalanguage/gdl", + "avatar": "https://avatars.githubusercontent.com/u/8539759?v=4", + "description": "GDL - GNU Data Language", + "topics": [ + "astronomy", + "data-analysis", + "antlr", + "python", + "pv-wave", + "programming-language", + "geophysics", + "mapping", + "scientific-computing", + "scientific-visualization", + "plplot", + "gsl-library", + "plotting", + "netcdf", + "hdf5", + "hdf", + "dicom", + "fits-files", + "grib", + "eigen3" + ] }, { - "uid": "github/FergusDonnan/PAHDecomp", - "url": "https://github.com/FergusDonnan/PAHDecomp", - "rel": "/software/repository/github/FergusDonnan/PAHDecomp", - "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", - "description": null, - "topics": [] + "uid": "github/secimTools/SECIMTools", + "url": "https://github.com/secimTools/SECIMTools", + "rel": "/software/repository/github/secimTools/SECIMTools", + "avatar": "https://avatars.githubusercontent.com/u/13206950?v=4", + "description": "A set of metabolomics tools for use in Galaxy", + "topics": [ + "metabolomics", + "galaxy", + "secim", + "lasso", + "anova", + "random-forest", + "pca-analysis" + ] }, { - "uid": "github/FergusDonnan/PyROA", - "url": "https://github.com/FergusDonnan/PyROA", - "rel": "/software/repository/github/FergusDonnan/PyROA", - "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", - "description": null, + "uid": "github/biaslab/RxInfer.jl", + "url": "https://github.com/biaslab/RxInfer.jl", + "rel": "/software/repository/github/biaslab/RxInfer.jl", + "avatar": "https://avatars.githubusercontent.com/u/6670190?v=4", + "description": "Julia package for automated Bayesian inference on a factor graph with reactive message passing", "topics": [] }, { - "uid": "github/FergusDonnan/Running-Optimal-Average", - "url": "https://github.com/FergusDonnan/Running-Optimal-Average", - "rel": "/software/repository/github/FergusDonnan/Running-Optimal-Average", - "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", - "description": null, + "uid": "github/containers/podman", + "url": "https://github.com/containers/podman", + "rel": "/software/repository/github/containers/podman", + "avatar": "https://avatars.githubusercontent.com/u/5874934?v=4", + "description": "Podman: A tool for managing OCI containers and pods", "topics": [] }, { - "uid": "github/openneuropet/PET2BIDS", - "url": "https://github.com/openneuropet/PET2BIDS", - "rel": "/software/repository/github/openneuropet/PET2BIDS", - "avatar": "https://avatars.githubusercontent.com/u/81369350?v=4", - "description": "PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @JOSS https://doi.org/10.21105/joss.06067", + "uid": "github/theosanderson/chronumental", + "url": "https://github.com/theosanderson/chronumental", + "rel": "/software/repository/github/theosanderson/chronumental", + "avatar": "https://avatars.githubusercontent.com/u/19732295?v=4", + "description": "Estimating time trees from very large phylogenies", "topics": [ - "metadata", - "converter", - "json", - "bids" + "phylogenetics", + "timetree", + "jax", + "numpyro" ] }, { - "uid": "github/joshuakt/Oxygen-False-Positives", - "url": "https://github.com/joshuakt/Oxygen-False-Positives", - "rel": "/software/repository/github/joshuakt/Oxygen-False-Positives", - "avatar": "https://avatars.githubusercontent.com/u/37488322?v=4", - "description": "Python source code for planetary evolution model described in Krissansen-Totton et al. (2021; AGU Advances)", + "uid": "github/mchalela/GriSPy", + "url": "https://github.com/mchalela/GriSPy", + "rel": "/software/repository/github/mchalela/GriSPy", + "avatar": "https://avatars.githubusercontent.com/u/26146886?v=4", + "description": "GriSPy is a regular grid search algorithm for quick nearest-neighbor lookup.", "topics": [] }, { - "uid": "github/Bahler-Lab/pyphe", - "url": "https://github.com/Bahler-Lab/pyphe", - "rel": "/software/repository/github/Bahler-Lab/pyphe", - "avatar": "https://avatars.githubusercontent.com/u/15102975?v=4", - "description": "Python toolbox for phenotype analysis of arrayed microbial colonies", + "uid": "github/hover2pi/SEDkit", + "url": "https://github.com/hover2pi/sedkit", + "rel": "/software/repository/github/hover2pi/SEDkit", + "avatar": "https://avatars.githubusercontent.com/u/34687?v=4", + "description": "Spectral energy distribution construction and analysis tools", "topics": [] }, { - "uid": "github/leapigufpb/FuzzyClass", - "url": "https://github.com/leapigufpb/FuzzyClass", - "rel": "/software/repository/github/leapigufpb/FuzzyClass", - "avatar": "https://avatars.githubusercontent.com/u/126794664?v=4", - "description": null, - "topics": [ - "fuzzy", - "machine-learning", - "package", - "r" - ] + "uid": "github/kno10/python-kmedoids", + "url": "https://github.com/kno10/python-kmedoids", + "rel": "/software/repository/github/kno10/python-kmedoids", + "avatar": "https://avatars.githubusercontent.com/u/3997899?v=4", + "description": "Fast K-Medoids clustering in Python with FasterPAM", + "topics": [] }, { - "uid": "github/oliveirara/polyMV", - "url": "https://github.com/oliveirara/polyMV", - "rel": "/software/repository/github/oliveirara/polyMV", - "avatar": "https://avatars.githubusercontent.com/u/12023276?v=4", - "description": "Python package that converts multipolar coefficients into Multipole Vectors and Fr\u00e9chet Vectors", + "uid": "github/abacusorg/zeldovich-PLT", + "url": "https://github.com/abacusorg/zeldovich-PLT", + "rel": "/software/repository/github/abacusorg/zeldovich-PLT", + "avatar": "https://avatars.githubusercontent.com/u/42353087?v=4", + "description": "Generates initial conditions for cosmological N-body simulations, optionally applying Particle Linear Theory corrections.", "topics": [ "cosmology", - "multipole-vectors", - "frechet-vectors" + "nbody", + "nbody-simulation" ] }, { - "uid": "github/yyZhang14/dbEssLnc", - "url": "https://github.com/yyZhang14/dbEssLnc", - "rel": "/software/repository/github/yyZhang14/dbEssLnc", - "avatar": "https://avatars.githubusercontent.com/u/86227741?v=4", - "description": "a Vue.js project", + "uid": "github/mirnylab/pairtools", + "url": "https://github.com/open2c/pairtools", + "rel": "/software/repository/github/mirnylab/pairtools", + "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", + "description": "CLI tools to process mapped Hi-C data", "topics": [] }, { - "uid": "github/Cascella-Group-UiO/HyMD", - "url": "https://github.com/Cascella-Group-UiO/HyMD", - "rel": "/software/repository/github/Cascella-Group-UiO/HyMD", - "avatar": "https://avatars.githubusercontent.com/u/63226974?v=4", - "description": "Massively parallel hybrid particle-field molecular dynamics in Python.", + "uid": "github/mirnylab/cooler", + "url": "https://github.com/open2c/cooler", + "rel": "/software/repository/github/mirnylab/cooler", + "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", + "description": "is a support library for a sparse, compressed, binary persistent storage format, also called cooler, used to store genomic interaction data, such as Hi-C contact matrices.", "topics": [ - "hybrid-particle-field", - "coarse-grained", - "chemistry", - "physics", - "molecular-dynamics" + "contact-matrix", + "hdf5", + "python", + "sparse", + "genomics", + "hi-c", + "bioinformatics", + "file-format", + "cooler" ] }, { - "uid": "github/thegenemyers/DAMAPPER", - "url": "https://github.com/thegenemyers/DAMAPPER", - "rel": "/software/repository/github/thegenemyers/DAMAPPER", - "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", - "description": "Long read to reference genome mapping tool", + "uid": "github/tariqdaouda/CAMAP", + "url": "https://github.com/tariqdaouda/CAMAP", + "rel": "/software/repository/github/tariqdaouda/CAMAP", + "avatar": "https://avatars.githubusercontent.com/u/7224902?v=4", + "description": "Codon Arrangement MAP Predictor, predicting MHC-I Associated Peptides presentation form mRNA", "topics": [] }, { - "uid": "github/thegenemyers/DAZZ_DB", - "url": "https://github.com/thegenemyers/DAZZ_DB", - "rel": "/software/repository/github/thegenemyers/DAZZ_DB", - "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", - "description": "The Dazzler Data Base", + "uid": "github/psheehan/pdspy", + "url": "https://github.com/psheehan/pdspy", + "rel": "/software/repository/github/psheehan/pdspy", + "avatar": "https://avatars.githubusercontent.com/u/5460275?v=4", + "description": "pdspy: MCMC for Monte Carlo Dust Radiative Transfer Modeling", "topics": [] }, { - "uid": "github/thegenemyers/FASTK", - "url": "https://github.com/thegenemyers/FASTK", - "rel": "/software/repository/github/thegenemyers/FASTK", - "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", - "description": "A fast K-mer counter for high-fidelity shotgun datasets", + "uid": "github/nadvornikjiri/HiSS-Cube", + "url": "https://github.com/nadvornikjiri/HiSS-Cube", + "rel": "/software/repository/github/nadvornikjiri/HiSS-Cube", + "avatar": "https://avatars.githubusercontent.com/u/3609910?v=4", + "description": "Software package for handling multi-dimensional multi-resolution data within Database.", "topics": [] }, { - "uid": "github/thegenemyers/DEXTRACTOR", - "url": "https://github.com/thegenemyers/DEXTRACTOR", - "rel": "/software/repository/github/thegenemyers/DEXTRACTOR", - "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", - "description": "bax file decoder and data compressor.", + "uid": "github/fgerick/Limace.jl", + "url": "https://github.com/fgerick/Limace.jl", + "rel": "/software/repository/github/fgerick/Limace.jl", + "avatar": "https://avatars.githubusercontent.com/u/12558460?v=4", + "description": null, "topics": [] }, { - "uid": "github/thegenemyers/DALIGNER", - "url": "https://github.com/thegenemyers/DALIGNER", - "rel": "/software/repository/github/thegenemyers/DALIGNER", - "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", - "description": "finds all significant local alignments between reads.", + "uid": "github/PFPE/shipgrav", + "url": "https://github.com/PFPE/shipgrav", + "rel": "/software/repository/github/PFPE/shipgrav", + "avatar": "https://avatars.githubusercontent.com/u/173928896?v=4", + "description": "Marine gravity processing for UNOLS (Python)", "topics": [] }, { - "uid": "github/qmarcou/IGoR", - "url": "https://github.com/qmarcou/IGoR", - "rel": "/software/repository/github/qmarcou/IGoR", - "avatar": "https://avatars.githubusercontent.com/u/18257721?v=4", - "description": "IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:", + "uid": "github/easybuilders/easybuild", + "url": "https://github.com/easybuilders/easybuild", + "rel": "/software/repository/github/easybuilders/easybuild", + "avatar": "https://avatars1.githubusercontent.com/u/29568382?v=4", + "description": "EasyBuild - building software with ease", + "topics": [] + }, + { + "uid": "github/UCL/rmcmc", + "url": "https://github.com/UCL/rmcmc", + "rel": "/software/repository/github/UCL/rmcmc", + "avatar": "https://avatars.githubusercontent.com/u/2951150?v=4", + "description": "Robust Markov chain Monte Carlo methods in R", "topics": [ - "inference", - "igor", - "recombination", - "immunology", - "simulation", - "hypermutation" + "approximate-inference", + "mcmc", + "r" ] }, { - "uid": "github/hover2pi/SEDkit", - "url": "https://github.com/hover2pi/sedkit", - "rel": "/software/repository/github/hover2pi/SEDkit", - "avatar": "https://avatars.githubusercontent.com/u/34687?v=4", - "description": "Spectral energy distribution construction and analysis tools", + "uid": "github/rasg-affiliates/healvis", + "url": "https://github.com/rasg-affiliates/healvis", + "rel": "/software/repository/github/rasg-affiliates/healvis", + "avatar": "https://avatars.githubusercontent.com/u/57962800?v=4", + "description": "Visibility simulation off of HEALPix shells.", "topics": [] }, { - "uid": "github/EnricoCorsaro/DIAMONDS", - "url": "https://github.com/EnricoCorsaro/DIAMONDS", - "rel": "/software/repository/github/EnricoCorsaro/DIAMONDS", - "avatar": "https://avatars.githubusercontent.com/u/23703395?v=4", - "description": "DIAMONDS (high-DImensional And multi-MOdal NesteD Sampling) - Bayesian Inference Software", + "uid": "github/rasg-affiliates/21cmSense", + "url": "https://github.com/rasg-affiliates/21cmSense", + "rel": "/software/repository/github/rasg-affiliates/21cmSense", + "avatar": "https://avatars.githubusercontent.com/u/57962800?v=4", + "description": "Code for calculating the sensitivity of 21cm experiments to the EoR power spectrum", "topics": [] }, { - "uid": "github/EnricoCorsaro/FAMED", - "url": "https://github.com/EnricoCorsaro/FAMED", - "rel": "/software/repository/github/EnricoCorsaro/FAMED", - "avatar": "https://avatars.githubusercontent.com/u/23703395?v=4", - "description": "FAMED (Fast and AutoMated pEak bagging with DIAMONDS) - Pipeline", + "uid": "github/Markusjsommer/BalrogCPP", + "url": "https://github.com/Markusjsommer/BalrogCPP", + "rel": "/software/repository/github/Markusjsommer/BalrogCPP", + "avatar": "https://avatars.githubusercontent.com/u/16809312?v=4", + "description": "A universal protein model for prokaryotic gene prediction", "topics": [] }, { - "uid": "github/daiqile96/OTTERS_paper", - "url": "https://github.com/daiqile96/OTTERS_paper", - "rel": "/software/repository/github/daiqile96/OTTERS_paper", - "avatar": "https://avatars.githubusercontent.com/u/55097180?v=4", - "description": null, - "topics": [] + "uid": "github/ictr/covid19-outbreak-simulator", + "url": "https://github.com/ictr/covid19-outbreak-simulator", + "rel": "/software/repository/github/ictr/covid19-outbreak-simulator", + "avatar": "https://avatars.githubusercontent.com/u/62562139?v=4", + "description": "Population-based Forward-time Simulator for the Outbreak of COVID-19", + "topics": [ + "covid-19", + "simulation", + "quarantine", + "virus", + "outbreak", + "simulate-scenarios", + "population-model" + ] }, { - "uid": "github/EdoardoCarlesi/cmbeasy", - "url": "https://github.com/EdoardoCarlesi/cmbeasy", - "rel": "/software/repository/github/EdoardoCarlesi/cmbeasy", - "avatar": "https://avatars.githubusercontent.com/u/4144770?v=4", - "description": "My CMBEASY implementation", + "uid": "github/mecobpsu/bacseq", + "url": "https://github.com/tmrcpsu/bacseq", + "rel": "/software/repository/github/mecobpsu/bacseq", + "avatar": "https://avatars.githubusercontent.com/u/85468876?v=4", + "description": null, "topics": [] }, { - "uid": "github/kuanrongchan/COVID19-severity", - "url": "https://github.com/kuanrongchan/COVID19-severity", - "rel": "/software/repository/github/kuanrongchan/COVID19-severity", - "avatar": "https://avatars.githubusercontent.com/u/91276553?v=4", - "description": null, + "uid": "github/cdominik/optool", + "url": "https://github.com/cdominik/optool", + "rel": "/software/repository/github/cdominik/optool", + "avatar": "https://avatars.githubusercontent.com/u/32773?v=4", + "description": "Command-line driven tool to create dust opacities", "topics": [] }, { - "uid": "github/acbecker/hotpants", - "url": "https://github.com/acbecker/hotpants", - "rel": "/software/repository/github/acbecker/hotpants", - "avatar": "https://avatars.githubusercontent.com/u/901357?v=4", - "description": "hotpants", - "topics": [] + "uid": "github/sheryl-ai/MetaPred", + "url": "https://github.com/sheryl-ai/MetaPred", + "rel": "/software/repository/github/sheryl-ai/MetaPred", + "avatar": "https://avatars.githubusercontent.com/u/28990004?v=4", + "description": "MetaPred: Meta-Learning for Clinical Risk Prediction with Limited Patient Electronic Health Records (KDD 2019)", + "topics": [ + "meta-learning" + ] }, { - "uid": "github/tjiangHIT/cuteSV", - "url": "https://github.com/tjiangHIT/cuteSV", - "rel": "/software/repository/github/tjiangHIT/cuteSV", - "avatar": "https://avatars.githubusercontent.com/u/7637156?v=4", - "description": "Long read based human genomic structural variation detection with cuteSV", + "uid": "github/hanyue36/nanoplexer", + "url": "https://github.com/hanyue36/nanoplexer", + "rel": "/software/repository/github/hanyue36/nanoplexer", + "avatar": "https://avatars.githubusercontent.com/u/8010327?v=4", + "description": "Tool for demultiplexing Nanopore barcode sequence data", "topics": [ - "structural-variation", - "pacbio-data", - "oxford-nanopore" + "bioinformatics", + "genomics", + "nanopore", + "barcode" ] }, { - "uid": "github/tombisho/dsSyntheticClient", - "url": "https://github.com/tombisho/dsSyntheticClient", - "rel": "/software/repository/github/tombisho/dsSyntheticClient", - "avatar": "https://avatars.githubusercontent.com/u/8521654?v=4", + "uid": "github/christiangil/StellarSpectraObservationFitting.jl", + "url": "https://github.com/christiangil/StellarSpectraObservationFitting.jl", + "rel": "/software/repository/github/christiangil/StellarSpectraObservationFitting.jl", + "avatar": "https://avatars.githubusercontent.com/u/32468452?v=4", + "description": "Data-driven models for extremely precise radial velocity (EPRV) spectra", + "topics": [] + }, + { + "uid": "github/berenslab/fundus_image_toolbox", + "url": "https://github.com/berenslab/fundus_image_toolbox", + "rel": "/software/repository/github/berenslab/fundus_image_toolbox", + "avatar": "https://avatars.githubusercontent.com/u/20125525?v=4", + "description": "A Python package for fundus image processing.", + "topics": [] + }, + { + "uid": "github/berenslab/MorphoPy", + "url": "https://github.com/berenslab/MorphoPy", + "rel": "/software/repository/github/berenslab/MorphoPy", + "avatar": "https://avatars3.githubusercontent.com/u/20125525?v=4", "description": null, "topics": [] }, { - "uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", - "url": "https://github.com/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", - "rel": "/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", - "avatar": "https://avatars.githubusercontent.com/u/68844397?v=4", - "description": "Extreme Value Theory for comparing periodograms: Optimizing future transiting exoplanet surveys", - "topics": [ - "exoplanet-transits", - "extreme-value-statistics", - "periodogram" - ] + "uid": "github/lnasellentin/DALI", + "url": "https://github.com/Lnasellentin/DALI", + "rel": "/software/repository/github/lnasellentin/DALI", + "avatar": "https://avatars.githubusercontent.com/u/11210388?v=4", + "description": "Non-Gaussian Likelihood Approximations", + "topics": [] }, { - "uid": "github/Yash-10/beta-sgp", - "url": "https://github.com/Yash-10/beta-sgp", - "rel": "/software/repository/github/Yash-10/beta-sgp", - "avatar": "https://avatars.githubusercontent.com/u/68844397?v=4", - "description": "Scaled Gradient Projection (SGP) algorithm with beta divergence", + "uid": "github/walaj/svaba", + "url": "https://github.com/walaj/svaba", + "rel": "/software/repository/github/walaj/svaba", + "avatar": "https://avatars.githubusercontent.com/u/6922120?v=4", + "description": "Structural variation and indel detection by local assembly", "topics": [ - "astronomy", - "image-restoration", - "mathematical-optimization" + "indels", + "variants", + "assembled-contigs", + "structural-variations", + "c-plus-plus" ] }, { - "uid": "github/xszhu-lab/AGImpute", - "url": "https://github.com/xszhu-lab/AGImpute", - "rel": "/software/repository/github/xszhu-lab/AGImpute", - "avatar": "https://avatars.githubusercontent.com/u/65640906?v=4", - "description": "A composite structure model for single-cell RNA-seq imputation", - "topics": [] + "uid": "github/walaj/SeqLib", + "url": "https://github.com/walaj/SeqLib", + "rel": "/software/repository/github/walaj/SeqLib", + "avatar": "https://avatars.githubusercontent.com/u/6922120?v=4", + "description": "C++ htslib/bwa-mem/fermi interface for interrogating sequence data", + "topics": [ + "bwa-mem", + "fermi", + "htslib", + "c-plus-plus", + "sequence-alignments" + ] }, { - "uid": "github/icecube/TauRunner", - "url": "https://github.com/icecube/TauRunner", - "rel": "/software/repository/github/icecube/TauRunner", - "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", - "description": "Code to propagate tau neutrinos at very high energies", + "uid": "github/GabrielaCR/AGNfitter", + "url": "https://github.com/GabrielaCR/AGNfitter", + "rel": "/software/repository/github/GabrielaCR/AGNfitter", + "avatar": "https://avatars.githubusercontent.com/u/5812461?v=4", + "description": "SED-fitting code for AGN and galaxies from a MCMC approach", "topics": [] }, { - "uid": "github/icecube/toise", - "url": "https://github.com/icecube/toise", - "rel": "/software/repository/github/icecube/toise", - "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", - "description": "Framework to describe the performance of high-energy neutrino detectors", - "topics": [] + "uid": "github/tidyverse/ggplot2", + "url": "https://github.com/tidyverse/ggplot2", + "rel": "/software/repository/github/tidyverse/ggplot2", + "avatar": "https://avatars.githubusercontent.com/u/22032646?v=4", + "description": "An implementation of the Grammar of Graphics in R", + "topics": [ + "r", + "visualisation", + "data-visualisation" + ] }, { - "uid": "github/icecube/FIRESONG", - "url": "https://github.com/icecube/FIRESONG", - "rel": "/software/repository/github/icecube/FIRESONG", - "avatar": "https://avatars.githubusercontent.com/u/74313698?v=4", - "description": "FIRst Extragalactic Simulation Of Neutrino and Gamma-ray", - "topics": [] + "uid": "github/tidyverse/glue", + "url": "https://github.com/tidyverse/glue", + "rel": "/software/repository/github/tidyverse/glue", + "avatar": "https://avatars2.githubusercontent.com/u/22032646?v=4", + "description": "Glue strings to data in R. Small, fast, dependency free interpreted string literals.", + "topics": [ + "r", + "strings", + "string-interpolation" + ] }, { - "uid": "github/macs3-project/MACS", - "url": "https://github.com/macs3-project/MACS", - "rel": "/software/repository/github/macs3-project/MACS", - "avatar": "https://avatars.githubusercontent.com/u/66320751?v=4", - "description": "MACS -- Model-based Analysis of ChIP-Seq", + "uid": "github/gianthk/ciclope", + "url": "https://github.com/gianthk/ciclope", + "rel": "/software/repository/github/gianthk/ciclope", + "avatar": "https://avatars.githubusercontent.com/u/15721147?v=4", + "description": "Computed Tomography to Finite Elements", "topics": [ - "chip-seq", - "atac-seq", - "dnase-seq", - "peak-caller", + "simulation", + "finite-elements", + "computed-tomography", "python", - "poisson-equation", - "macs" + "engineering", + "biomechanics" ] }, { - "uid": "github/Kuifje02/vrpy", - "url": "https://github.com/Kuifje02/vrpy", - "rel": "/software/repository/github/Kuifje02/vrpy", - "avatar": "https://avatars0.githubusercontent.com/u/19840033?v=4", - "description": "A python framework for solving the VRP and its variants with column generation.", + "uid": "github/esheldon/ngmix", + "url": "https://github.com/esheldon/ngmix", + "rel": "/software/repository/github/esheldon/ngmix", + "avatar": "https://avatars.githubusercontent.com/u/621661?v=4", + "description": "Gaussian mixtures and image processing implemented in python", "topics": [ - "optimization", - "cspy", - "column-generation", - "vrp", - "cvrp", - "vrptw", "python", - "networkx", - "pulp", - "coinor" + "image-processing", + "c" ] }, { - "uid": "github/COMBINE-lab/RapMap", - "url": "https://github.com/COMBINE-lab/RapMap", - "rel": "/software/repository/github/COMBINE-lab/RapMap", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "Rapid sensitive and accurate read mapping via quasi-mapping", + "uid": "github/aibhleog/baryon-sweep", + "url": "https://github.com/aibhleog/baryon-sweep", + "rel": "/software/repository/github/aibhleog/baryon-sweep", + "avatar": "https://avatars.githubusercontent.com/u/13223263?v=4", + "description": "a custom outlier rejection algorithm for JWST/NIRSpec IFS data, described in Hutchison et al. (submitted to PASP)", "topics": [] }, { - "uid": "github/COMBINE-lab/salmon", - "url": "https://github.com/COMBINE-lab/salmon", - "rel": "/software/repository/github/COMBINE-lab/salmon", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "\ud83d\udc1f \ud83c\udf63 \ud83c\udf71 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment", + "uid": "github/python-streamz/streamz", + "url": "https://github.com/python-streamz/streamz", + "rel": "/software/repository/github/python-streamz/streamz", + "avatar": "https://avatars.githubusercontent.com/u/49496449?v=4", + "description": "Real-time stream processing for python", + "topics": [ + "streaming-data", + "python", + "async", + "real-time" + ] + }, + { + "uid": "github/widdowquinn/pyani", + "url": "https://github.com/widdowquinn/pyani", + "rel": "/software/repository/github/widdowquinn/pyani", + "avatar": "https://avatars.githubusercontent.com/u/63981?v=4", + "description": "Application and Python module for average nucleotide identity analyses of microbes.", "topics": [ - "quasi-mapping", "bioinformatics", - "rna-seq", - "rnaseq", - "salmon", - "quantification", - "sailfish", - "c-plus-plus", - "gene-expression", - "scrna-seq", - "single-cell", - "10x", - "selective-alignment", - "rna-seq-quantification", - "single-cell-rna-seq", - "transcriptome" + "average-nucleotide-identity", + "taxonomy", + "taxonomy-assignment", + "classification", + "ani" ] }, { - "uid": "github/COMBINE-lab/terminus", - "url": "https://github.com/COMBINE-lab/terminus", - "rel": "/software/repository/github/COMBINE-lab/terminus", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "enables the discovery of data-driven, robust transcript groups from RNA-seq data.", + "uid": "github/Pometry/Raphtory", + "url": "https://github.com/Pometry/Raphtory", + "rel": "/software/repository/github/Pometry/Raphtory", + "avatar": "https://avatars.githubusercontent.com/u/89028534?v=4", + "description": "Blazingly fast, vectorised, parallel, and scalable temporal graph engine for Rust, Python and JavaScript", "topics": [ - "rna-seq", - "transcriptomics", - "gene-expression" + "graph", + "graph-algorithms", + "graph-analysis", + "graph-theory", + "graphviz", + "python", + "rust", + "temporal-networks", + "analytics", + "embeddable-database", + "graph-database", + "time-series" ] }, { - "uid": "github/COMBINE-lab/pufferfish", - "url": "https://github.com/COMBINE-lab/pufferfish", - "rel": "/software/repository/github/COMBINE-lab/pufferfish", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "An efficient index for the colored, compacted, de Bruijn graph", + "uid": "github/caimeng2/seesus", + "url": "https://github.com/caimeng2/seesus", + "rel": "/software/repository/github/caimeng2/seesus", + "avatar": "https://avatars.githubusercontent.com/u/51100838?v=4", + "description": "A Python package that identifies 17 Sustainable Development Goals and their 169 Targets in text, and classifies into social, environmental, and economic sustainability.", "topics": [ - "debruijn-graph", - "debruijn", - "index", - "hash", - "contigs", - "genome", - "dbg" + "classification", + "regular-expressions", + "sdg", + "sustainability", + "sustainability-developoment-goals", + "text-mining" ] }, { - "uid": "github/COMBINE-lab/simpleaf", - "url": "https://github.com/COMBINE-lab/simpleaf", - "rel": "/software/repository/github/COMBINE-lab/simpleaf", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "A rust framework to make using alevin-fry even simpler", + "uid": "github/ndrakos/ICICLE", + "url": "https://github.com/ndrakos/ICICLE", + "rel": "/software/repository/github/ndrakos/ICICLE", + "avatar": "https://avatars.githubusercontent.com/u/24570695?v=4", + "description": "Initial Conditions for Isolated CoLlisionless systEms", "topics": [] }, { - "uid": "github/COMBINE-lab/oarfish", - "url": "https://github.com/COMBINE-lab/oarfish", - "rel": "/software/repository/github/COMBINE-lab/oarfish", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "long read RNA-seq quantification", + "uid": "github/etal/cnvkit", + "url": "https://github.com/etal/cnvkit", + "rel": "/software/repository/github/etal/cnvkit", + "avatar": "https://avatars.githubusercontent.com/u/52723?v=4", + "description": "a command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from high-throughput sequencing.", "topics": [] }, { - "uid": "github/COMBINE-lab/libgff", - "url": "https://github.com/COMBINE-lab/libgff", - "rel": "/software/repository/github/COMBINE-lab/libgff", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "GFF/GTF parsing from cufflinks as a library", - "topics": [] + "uid": "github/Yash-10/beta-sgp", + "url": "https://github.com/Yash-10/beta-sgp", + "rel": "/software/repository/github/Yash-10/beta-sgp", + "avatar": "https://avatars.githubusercontent.com/u/68844397?v=4", + "description": "Scaled Gradient Projection (SGP) algorithm with beta divergence", + "topics": [ + "astronomy", + "image-restoration", + "mathematical-optimization" + ] }, { - "uid": "github/COMBINE-lab/alevin-fry", - "url": "https://github.com/COMBINE-lab/alevin-fry", - "rel": "/software/repository/github/COMBINE-lab/alevin-fry", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "\ud83d\udc1f \ud83d\udd2c\ud83e\udd80 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.", + "uid": "github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", + "url": "https://github.com/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", + "rel": "/software/repository/github/Yash-10/Periodogram-Comparison-Optimize-Planet-Detection", + "avatar": "https://avatars.githubusercontent.com/u/68844397?v=4", + "description": "Extreme Value Theory for comparing periodograms: Optimizing future transiting exoplanet surveys", "topics": [ - "single-cell", - "rust", - "transcriptomics", - "rna-seq", - "single-cell-rna-seq", - "quantification", - "10x" + "exoplanet-transits", + "extreme-value-statistics", + "periodogram" ] }, { - "uid": "github/COMBINE-lab/cuttlefish", - "url": "https://github.com/COMBINE-lab/cuttlefish", - "rel": "/software/repository/github/COMBINE-lab/cuttlefish", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "a fast, parallel, and very lightweight memory tool to construct the compacted de Bruijn graph from genome reference(s).", + "uid": "github/CIBERER/nf-CBRA-snvs", + "url": "https://github.com/CIBERER/nf-CBRA-snvs", + "rel": "/software/repository/github/CIBERER/nf-CBRA-snvs", + "avatar": "https://avatars.githubusercontent.com/u/105356203?v=4", + "description": null, "topics": [] }, { - "uid": "github/matta-research-group/SwiftPol", - "url": "https://github.com/matta-research-group/SwiftPol", - "rel": "/software/repository/github/matta-research-group/SwiftPol", - "avatar": "https://avatars.githubusercontent.com/u/98654089?v=4", - "description": "Tools for polymer molecular dynamics simulations", - "topics": [] + "uid": "github/HKU-BAL/Clair3", + "url": "https://github.com/HKU-BAL/Clair3", + "rel": "/software/repository/github/HKU-BAL/Clair3", + "avatar": "https://avatars.githubusercontent.com/u/13270645?v=4", + "description": "Clair3 - Symphonizing pileup and full-alignment for high-performance long-read variant calling", + "topics": [ + "deep-learning", + "variant-calling", + "computational-biology", + "nanopore", + "long-reads", + "genomics", + "ont-data", + "ont-models", + "illumina", + "pacbio", + "variant-detection" + ] }, { - "uid": "github/RafaelSdeSouza/capivara", - "url": "https://github.com/RafaelSdeSouza/capivara", - "rel": "/software/repository/github/RafaelSdeSouza/capivara", - "avatar": "https://avatars.githubusercontent.com/u/3153856?v=4", + "uid": "github/robynlm/ebweyl", + "url": "https://github.com/robynlm/ebweyl", + "rel": "/software/repository/github/robynlm/ebweyl", + "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", "description": null, "topics": [] }, { - "uid": "github/RafaelSdeSouza/qrpca", - "url": "https://github.com/RafaelSdeSouza/qrpca", - "rel": "/software/repository/github/RafaelSdeSouza/qrpca", - "avatar": "https://avatars.githubusercontent.com/u/3153856?v=4", - "description": "QR based Principal Components Analysis", - "topics": [ - "pca", - "r", - "dimensionality-reduction" - ] + "uid": "github/robynlm/sphereint", + "url": "https://github.com/robynlm/sphereint", + "rel": "/software/repository/github/robynlm/sphereint", + "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", + "description": "Code to integrate data on a grid within a sphere", + "topics": [] }, { - "uid": "github/qiankunzizairen/PanGIA", - "url": "https://github.com/qiankunzizairen/PanGIA", - "rel": "/software/repository/github/qiankunzizairen/PanGIA", - "avatar": "https://avatars.githubusercontent.com/u/207340525?v=4", + "uid": "github/robynlm/ICPertFLRW", + "url": "https://github.com/robynlm/ICPertFLRW", + "rel": "/software/repository/github/robynlm/ICPertFLRW", + "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", "description": null, "topics": [] }, { - "uid": "github/alesantuz/musclesyneRgies", - "url": "https://github.com/alesantuz/musclesyneRgies", - "rel": "/software/repository/github/alesantuz/musclesyneRgies", - "avatar": "https://avatars.githubusercontent.com/u/7524938?v=4", - "description": "R package to extract muscle synergies from electromyogram", - "topics": [ - "muscle-synergies", - "emg", - "nmf", - "rstudio", - "r", - "physiol" - ] + "uid": "github/facom/tidev", + "url": "https://github.com/facom/tidev", + "rel": "/software/repository/github/facom/tidev", + "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", + "description": null, + "topics": [] }, { - "uid": "github/bd-j/prospector", - "url": "https://github.com/bd-j/prospector", - "rel": "/software/repository/github/bd-j/prospector", - "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", - "description": "Python code for Stellar Population Inference from Spectra and SEDs", - "topics": [ - "stellar-population-properties", - "fitting" - ] + "uid": "github/facom/BHMcalc", + "url": "https://github.com/facom/BHMcalc", + "rel": "/software/repository/github/facom/BHMcalc", + "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", + "description": "Binary Habitability Mechanism - Calculator", + "topics": [] }, { - "uid": "github/bd-j/sedpy", - "url": "https://github.com/bd-j/sedpy", - "rel": "/software/repository/github/bd-j/sedpy", - "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", - "description": "Utilities for astronomical spectral energy distributions", + "uid": "github/facom/exorings", + "url": "https://github.com/facom/exorings", + "rel": "/software/repository/github/facom/exorings", + "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", + "description": "Code Repository for Exoring Transit Properties", "topics": [] }, { - "uid": "github/bd-j/forcepho", - "url": "https://github.com/bd-j/forcepho", - "rel": "/software/repository/github/bd-j/forcepho", - "avatar": "https://avatars.githubusercontent.com/u/4146628?v=4", - "description": "Generative modeling galaxy photometry for JWST", + "uid": "github/ngbusca/QuasarNET", + "url": "https://github.com/ngbusca/QuasarNET", + "rel": "/software/repository/github/ngbusca/QuasarNET", + "avatar": "https://avatars.githubusercontent.com/u/4727509?v=4", + "description": null, "topics": [] }, { - "uid": "github/lczech/gappa", - "url": "https://github.com/lczech/gappa", - "rel": "/software/repository/github/lczech/gappa", - "avatar": "https://avatars.githubusercontent.com/u/4741887?v=4", - "description": "A toolkit for analyzing and visualizing phylogenetic (placement) data", + "uid": "github/jonas/tig", + "url": "https://github.com/jonas/tig", + "rel": "/software/repository/github/jonas/tig", + "avatar": "https://avatars.githubusercontent.com/u/8417?v=4", + "description": "Text-mode interface for git", "topics": [ - "c-plus-plus", - "phylogenetics", - "phylogenetic-data", - "phylogenetic-placement", - "evolutionary-placement", - "placement", - "genesis", - "gappa" + "git", + "c", + "ncurses", + "tui" ] }, { - "uid": "github/devanshkv/fetch", - "url": "https://github.com/devanshkv/fetch", - "rel": "/software/repository/github/devanshkv/fetch", - "avatar": "https://avatars.githubusercontent.com/u/5568950?v=4", - "description": "A set of deep learning models for FRB/RFI binary classification. ", + "uid": "github/tcherninceline/PPInteractions", + "url": "https://github.com/tcherninceline/PPInteractions", + "rel": "/software/repository/github/tcherninceline/PPInteractions", + "avatar": "https://avatars.githubusercontent.com/u/11919405?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/xmuyulab/DreamDIA-XMBD", + "url": "https://github.com/xmuyulab/DreamDIA-XMBD", + "rel": "/software/repository/github/xmuyulab/DreamDIA-XMBD", + "avatar": "https://avatars.githubusercontent.com/u/36484498?v=4", + "description": "Software for data-independent acquisition (DIA) proteomic data processing with deep representation features.", + "topics": [] + }, + { + "uid": "github/klb2/qmkpy", + "url": "https://github.com/klb2/qmkpy", + "rel": "/software/repository/github/klb2/qmkpy", + "avatar": "https://avatars.githubusercontent.com/u/58686048?v=4", + "description": "Python testbed for the Quadratic Multiple Knapsack Problem (QMKP)", "topics": [ - "fast-radio-bursts", - "deep-learning", - "transfer-learning", - "binary-classification" + "knapsack-problem", + "operations-research", + "optimization" ] }, { - "uid": "github/robdjeff/eagles", - "url": "https://github.com/robdjeff/eagles", - "rel": "/software/repository/github/robdjeff/eagles", - "avatar": "https://avatars.githubusercontent.com/u/104770145?v=4", - "description": "Estimating AGes from Lithium Equivalent widthS", + "uid": "github/mjrfringes/haystacks", + "url": "https://github.com/mjrfringes/haystacks", + "rel": "/software/repository/github/mjrfringes/haystacks", + "avatar": "https://avatars.githubusercontent.com/u/13844169?v=4", + "description": null, "topics": [] }, { - "uid": "github/mcataneo/pyLDT-cosmo", - "url": "https://github.com/mcataneo/pyLDT-cosmo", - "rel": "/software/repository/github/mcataneo/pyLDT-cosmo", - "avatar": "https://avatars.githubusercontent.com/u/10965274?v=4", - "description": "Python code to generate matter PDF predictions in Large Deviation Theory", + "uid": "github/mifumagalli/cluster-cloc", + "url": "https://github.com/mifumagalli/cluster-cloc", + "rel": "/software/repository/github/mifumagalli/cluster-cloc", + "avatar": "https://avatars.githubusercontent.com/u/12461695?v=4", + "description": "Automatically exported from code.google.com/p/cluster-cloc", "topics": [] }, { - "uid": "github/mcataneo/mochi_class_public", - "url": "https://github.com/mcataneo/mochi_class_public", - "rel": "/software/repository/github/mcataneo/mochi_class_public", - "avatar": "https://avatars.githubusercontent.com/u/10965274?v=4", + "uid": "github/fermisurfaces/IFermi", + "url": "https://github.com/fermisurfaces/IFermi", + "rel": "/software/repository/github/fermisurfaces/IFermi", + "avatar": "https://avatars.githubusercontent.com/u/78813965?v=4", + "description": "Fermi surface generation, analysis and visualisation.", + "topics": [ + "fermi-surface", + "fermi-slice", + "vasp" + ] + }, + { + "uid": "github/wchenastro/Mosaic", + "url": "https://github.com/wchenastro/Mosaic", + "rel": "/software/repository/github/wchenastro/Mosaic", + "avatar": "https://avatars.githubusercontent.com/u/34242412?v=4", "description": null, "topics": [] }, { - "uid": "github/raddleverse/MimiBRICK.jl", - "url": "https://github.com/raddleverse/MimiBRICK.jl", - "rel": "/software/repository/github/raddleverse/MimiBRICK.jl", - "avatar": "https://avatars.githubusercontent.com/u/66496801?v=4", - "description": null, + "uid": "github/felixbosco/KeplerFit", + "url": "https://github.com/felixbosco/KeplerFit", + "rel": "/software/repository/github/felixbosco/KeplerFit", + "avatar": "https://avatars.githubusercontent.com/u/43186689?v=4", + "description": "A small piece of code to fit a Keplerian velocity distribution model to position-velocity data", "topics": [] }, { - "uid": "github/cdanielmachado/reframed", - "url": "https://github.com/cdanielmachado/reframed", - "rel": "/software/repository/github/cdanielmachado/reframed", - "avatar": "https://avatars.githubusercontent.com/u/2588245?v=4", - "description": "ReFramed: metabolic modeling package", + "uid": "github/nhejazi/haldensify", + "url": "https://github.com/nhejazi/haldensify", + "rel": "/software/repository/github/nhejazi/haldensify", + "avatar": "https://avatars.githubusercontent.com/u/8527276?v=4", + "description": ":package: R/haldensify: Highly Adaptive Lasso Conditional Density Estimation", "topics": [ - "metabolism", - "modeling", - "python" + "machine-learning", + "density-estimation", + "nonparametric-regression", + "highly-adaptive-lasso", + "propensity-score", + "conditional-density-estimates", + "causal-inference", + "inverse-probability-weights" ] }, { - "uid": "github/cdanielmachado/carveme", - "url": "https://github.com/cdanielmachado/carveme", - "rel": "/software/repository/github/cdanielmachado/carveme", - "avatar": "https://avatars.githubusercontent.com/u/2588245?v=4", - "description": "CarveMe: genome-scale metabolic model reconstruction", + "uid": "github/nhejazi/medoutcon", + "url": "https://github.com/nhejazi/medoutcon", + "rel": "/software/repository/github/nhejazi/medoutcon", + "avatar": "https://avatars.githubusercontent.com/u/8527276?v=4", + "description": ":package: R/medoutcon: Efficient Causal Mediation Analysis with Natural and Interventional Direct/Indirect Effects", "topics": [ - "metabolism", - "modeling", - "python", - "reconstruction", - "genome-scale" + "causal-inference", + "mediation-analysis", + "stochastic-interventions", + "machine-learning", + "targeted-learning", + "inverse-probability-weights", + "treatment-effects", + "r-package", + "r", + "causal-machine-learning" ] }, { - "uid": "github/HeracleBT/vEMstitch", - "url": "https://github.com/HeracleBT/vEMstitch", - "rel": "/software/repository/github/HeracleBT/vEMstitch", - "avatar": "https://avatars.githubusercontent.com/u/27627517?v=4", - "description": null, - "topics": [] + "uid": "github/nhejazi/txshift", + "url": "https://github.com/nhejazi/txshift", + "rel": "/software/repository/github/nhejazi/txshift", + "avatar": "https://avatars0.githubusercontent.com/u/8527276?v=4", + "description": ":package: :game_die: R/txshift: Efficient Estimation of the Causal Effects of Stochastic Interventions, with Two-Phase Sampling Corrections", + "topics": [ + "causal-inference", + "targeted-learning", + "machine-learning", + "stochastic-interventions", + "treatment-effects", + "variable-importance", + "censored-data", + "causal-effects", + "statistics", + "robust-statistics", + "stochastic-treatment-regimes" + ] }, { - "uid": "github/daehwankimlab/hisat2", - "url": "https://github.com/DaehwanKimLab/hisat2", - "rel": "/software/repository/github/daehwankimlab/hisat2", - "avatar": "https://avatars.githubusercontent.com/u/55465846?v=4", - "description": "Graph-based alignment (Hierarchical Graph FM index)", + "uid": "github/anmolter/XLUR", + "url": "https://github.com/anmolter/XLUR", + "rel": "/software/repository/github/anmolter/XLUR", + "avatar": "https://avatars3.githubusercontent.com/u/34544873?v=4", + "description": "A Python toolbox for ArcGIS Pro that enables the development and application of land use regression models.", "topics": [] }, { - "uid": "github/CHRF-Genomics/Paratype", - "url": "https://github.com/CHRF-Genomics/Paratype", - "rel": "/software/repository/github/CHRF-Genomics/Paratype", - "avatar": "https://avatars.githubusercontent.com/u/74655325?v=4", - "description": "Assign genotypes to Salmonella Paratyphi A isolates using their whole-genome data.", + "uid": "github/UU-ER/AdOpT-NET0", + "url": "https://github.com/UU-ER/AdOpT-NET0", + "rel": "/software/repository/github/UU-ER/AdOpT-NET0", + "avatar": "https://avatars.githubusercontent.com/u/40859062?v=4", + "description": "AdOpT-NET0 - Advanced Optimization Tool for Networks and Energy Technologies", "topics": [] }, { - "uid": "github/smeingast/PNICER", - "url": "https://github.com/smeingast/PNICER", - "rel": "/software/repository/github/smeingast/PNICER", - "avatar": "https://avatars.githubusercontent.com/u/4977153?v=4", - "description": null, + "uid": "github/andresGranadosC/GalRotpy", + "url": "https://github.com/andresGranadosC/GalRotpy", + "rel": "/software/repository/github/andresGranadosC/GalRotpy", + "avatar": "https://avatars.githubusercontent.com/u/24868453?v=4", + "description": "A Python-based tool to parametrize the rotation curve and the gravitational potential of disk-like galaxies", "topics": [] }, { - "uid": "github/Sulstice/cocktail-shaker", - "url": "https://github.com/Sulstice/cocktail-shaker", - "rel": "/software/repository/github/Sulstice/cocktail-shaker", - "avatar": "https://avatars0.githubusercontent.com/u/11812946?v=4", + "uid": "github/damocles-code/damocles", + "url": "https://github.com/damocles-code/damocles", + "rel": "/software/repository/github/damocles-code/damocles", + "avatar": "https://avatars.githubusercontent.com/u/16516847?v=4", "description": null, "topics": [] }, { - "uid": "github/cdominik/optool", - "url": "https://github.com/cdominik/optool", - "rel": "/software/repository/github/cdominik/optool", - "avatar": "https://avatars.githubusercontent.com/u/32773?v=4", - "description": "Command-line driven tool to create dust opacities", - "topics": [] + "uid": "github/python-hydro/pyro2", + "url": "https://github.com/python-hydro/pyro2", + "rel": "/software/repository/github/python-hydro/pyro2", + "avatar": "https://avatars.githubusercontent.com/u/40966363?v=4", + "description": "A framework for hydrodynamics explorations and prototyping", + "topics": [ + "finite-volume", + "finite-volume-methods", + "hydrodynamics", + "pyro", + "python", + "solver", + "advection", + "multigrid", + "simulation", + "astrophysical-simulation", + "pde" + ] }, { - "uid": "github/PEJpOhno/SMiPoly", - "url": "https://github.com/PEJpOhno/SMiPoly", - "rel": "/software/repository/github/PEJpOhno/SMiPoly", - "avatar": "https://avatars.githubusercontent.com/u/88958109?v=4", - "description": "rule-based virtual polymer library generator", + "uid": "github/EhsanGharibNezhad/TelescopeML", + "url": "https://github.com/EhsanGharibNezhad/TelescopeML", + "rel": "/software/repository/github/EhsanGharibNezhad/TelescopeML", + "avatar": "https://avatars.githubusercontent.com/u/22139918?v=4", + "description": "Deep Convolutional Neural Networks and Machine Learning Models for Analyzing Stellar and Exoplanetary Telescope Spectra", "topics": [ - "library", - "polymer", - "synthesis" + "astronomy", + "atmospheric-modelling", + "convolutional-neural-networks", + "machine-learning", + "star", + "telescope" ] }, { - "uid": "github/youngkaneda/DemeterWatch", - "url": "https://github.com/youngkaneda/DemeterWatch", - "rel": "/software/repository/github/youngkaneda/DemeterWatch", - "avatar": "https://avatars.githubusercontent.com/u/17750608?v=4", + "uid": "github/Simthembile/cosmo-pipeline", + "url": "https://github.com/Simthembile/cosmo-pipeline", + "rel": "/software/repository/github/Simthembile/cosmo-pipeline", + "avatar": "https://avatars.githubusercontent.com/u/20681273?v=4", "description": null, "topics": [] }, { - "uid": "github/zblz/naima", - "url": "https://github.com/zblz/naima", - "rel": "/software/repository/github/zblz/naima", - "avatar": "https://avatars.githubusercontent.com/u/576258?v=4", - "description": "Derivation of non-thermal particle distributions through MCMC spectral fitting", - "topics": [ - "astronomy", - "astrophysics", - "python", - "data-analysis", - "gamma-ray-astronomy" - ] + "uid": "github/helonghuangastro/exolyn", + "url": "https://github.com/helonghuangastro/ExoLyn", + "rel": "/software/repository/github/helonghuangastro/exolyn", + "avatar": "https://avatars.githubusercontent.com/u/172606016?v=4", + "description": null, + "topics": [] }, { - "uid": "github/QibangLiu/PDLSM-FEM_mpi", - "url": "https://github.com/QibangLiu/PDLSM-FEM_mpi", - "rel": "/software/repository/github/QibangLiu/PDLSM-FEM_mpi", - "avatar": "https://avatars.githubusercontent.com/u/62950134?v=4", - "description": "PDLSM-FEM solver is a parallel implementation of (adaptively) coupled peridynamics least squares minimization and finite element method (PDLSM-FEM) in 2D and 3D using MPI parallelism. This cross-platform solver is written in a C++ language and includes implicit static, explicit dynamic, and implicit dynamic solvers for structure analysis under displacement or traction loading.", + "uid": "github/julia-wrobel/registr", + "url": "https://github.com/julia-wrobel/registr", + "rel": "/software/repository/github/julia-wrobel/registr", + "avatar": "https://avatars.githubusercontent.com/u/11615315?v=4", + "description": "Register exponential family curves", "topics": [] }, { - "uid": "github/danmoser/pyhdust", - "url": "https://github.com/danmoser/pyhdust", - "rel": "/software/repository/github/danmoser/pyhdust", - "avatar": "https://avatars.githubusercontent.com/u/2973004?v=4", - "description": "Analysis tools for multi-technique astronomical data and hdust models", + "uid": "github/tomasplsek/CADET", + "url": "https://github.com/tomasplsek/CADET", + "rel": "/software/repository/github/tomasplsek/CADET", + "avatar": "https://avatars.githubusercontent.com/u/34679051?v=4", + "description": "Machine learning pipeline trained for finding and size-estimating X-ray cavities from noisy Chandra images of early-type galaxies.", "topics": [ - "python", - "astronomy", - "astrophysics" + "jax", + "segmentation", + "cavities", + "convolutional-neural-networks", + "keras", + "agn-feedback" ] }, { - "uid": "github/kegiljarhus/pyBEMT", - "url": "https://github.com/kegiljarhus/pyBEMT", - "rel": "/software/repository/github/kegiljarhus/pyBEMT", - "avatar": "https://avatars3.githubusercontent.com/u/19799448?v=4", - "description": "Implementation of the Blade Element Momentum Theory for turbines and propellers in Python", - "topics": [] + "uid": "github/MannLabs/alphapept", + "url": "https://github.com/MannLabs/alphapept", + "rel": "/software/repository/github/MannLabs/alphapept", + "avatar": "https://avatars.githubusercontent.com/u/46714192?v=4", + "description": "A modular, python-based framework for mass spectrometry. Powered by nbdev.", + "topics": [ + "mass-spectrometry", + "bioinformatics", + "proteomics" + ] }, { - "uid": "github/probml/dynamax", - "url": "https://github.com/probml/dynamax", - "rel": "/software/repository/github/probml/dynamax", - "avatar": "https://avatars.githubusercontent.com/u/6309387?v=4", - "description": "A Python package for probabilistic state space modeling with JAX", + "uid": "github/MikeHeiber/Excimontec", + "url": "https://github.com/MikeHeiber/Excimontec", + "rel": "/software/repository/github/MikeHeiber/Excimontec", + "avatar": "https://avatars3.githubusercontent.com/u/7010095?v=4", + "description": "Excimontec is an open-source KMC simulation software package for modeling the optoelectronic processes in organic semiconductor materials and devices, such as OPVs, OLEDs, and more. ", "topics": [ - "state-space-models", - "hidden-markov-models", - "jax", - "python", - "kalman-filter" + "kinetic-monte-carlo", + "mpi", + "organic-semiconductors" ] }, { - "uid": "github/ComtekAdvancedStructures/cmstatr", - "url": "https://github.com/ComtekAdvancedStructures/cmstatr", - "rel": "/software/repository/github/ComtekAdvancedStructures/cmstatr", - "avatar": "https://avatars3.githubusercontent.com/u/9559756?v=4", - "description": "An R Package for Statistical Analysis of Composite Material Data", + "uid": "github/CDCgov/BART-Survival", + "url": "https://github.com/CDCgov/BART-Survival", + "rel": "/software/repository/github/CDCgov/BART-Survival", + "avatar": "https://avatars.githubusercontent.com/u/12104975?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/google/caliban", + "url": "https://github.com/google/caliban", + "rel": "/software/repository/github/google/caliban", + "avatar": "https://avatars1.githubusercontent.com/u/1342004?v=4", + "description": "Research workflows made easy, locally and in the Cloud.", "topics": [ - "statistics", - "r", - "data", - "materials-science" + "docker", + "python3", + "research-tool", + "google-cloud", + "ai-platform" ] }, { - "uid": "github/BIMSBbioinfo/pigx_rnaseq", - "url": "https://github.com/BIMSBbioinfo/pigx_rnaseq", - "rel": "/software/repository/github/BIMSBbioinfo/pigx_rnaseq", - "avatar": "https://avatars.githubusercontent.com/u/6482905?v=4", - "description": "Pipeline for RNAseq", + "uid": "github/google/jax", + "url": "https://github.com/google/jax", + "rel": "/software/repository/github/google/jax", + "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", + "description": "Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more", "topics": [ - "rnaseq", - "pipeline", - "snakemake", - "guix", - "reproducibility" + "jax" ] }, { - "uid": "github/BIMSBbioinfo/pigx_scrnaseq", - "url": "https://github.com/BIMSBbioinfo/pigx_scrnaseq", - "rel": "/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", - "avatar": "https://avatars.githubusercontent.com/u/6482905?v=4", - "description": "Pipeline for analysis of Dropseq single cell data", + "uid": "github/google/best", + "url": "https://github.com/google/best", + "rel": "/software/repository/github/google/best", + "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", + "description": "Bam Error Stats Tool (best): analysis of error types in aligned reads.", "topics": [ - "dropseq", - "single-cell-rna-seq", - "snakemake-workflows", - "guix" + "bioinformatics", + "sequencing" ] }, { - "uid": "github/Jeremycouturier/NcorpiON", - "url": "https://github.com/Jeremycouturier/NcorpiON", - "rel": "/software/repository/github/Jeremycouturier/NcorpiON", - "avatar": "https://avatars.githubusercontent.com/u/49401230?v=4", - "description": "The official github repository of NcorpiON", - "topics": [] + "uid": "github/google/flax", + "url": "https://github.com/google/flax", + "rel": "/software/repository/github/google/flax", + "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", + "description": "Flax is a neural network library for JAX that is designed for flexibility.", + "topics": [ + "jax" + ] }, { - "uid": "github/ghislainv/forestatrisk", - "url": "https://github.com/ghislainv/forestatrisk", - "rel": "/software/repository/github/ghislainv/forestatrisk", - "avatar": "https://avatars.githubusercontent.com/u/4931332?v=4", - "description": ":package: :snake: Python package to model and forecast the risk of deforestation", + "uid": "github/Vini2/GraphBin", + "url": "https://github.com/metagentools/GraphBin", + "rel": "/software/repository/github/Vini2/GraphBin", + "avatar": "https://avatars.githubusercontent.com/u/105288780?v=4", + "description": "GraphBin: Refined binning of metagenomic contigs using assembly graphs", "topics": [ - "python", - "land-use-change", - "spatial-modelling", - "spatial-analysis", - "forecasting", - "spatial-autocorrelation", - "tropical-forests", - "roads", - "protected-areas", - "biodiversity-scenario", - "ipbes", - "co2-emissions", - "ipcc", - "forest-cover-change", - "deforestation", - "deforestation-risk", - "redd" + "metagenomics", + "binning", + "contigs", + "assembly-graph", + "label-propagation" ] }, { - "uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", - "url": "https://github.com/DreamCloud-Project/AMALTHEA-Microworkload-Generator", - "rel": "/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", - "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", - "description": "Command line tool generating micro workloads from an AMALTHEA application", + "uid": "github/buschlab/fhirspark", + "url": "https://github.com/buschlab/fhirspark", + "rel": "/software/repository/github/buschlab/fhirspark", + "avatar": "https://avatars.githubusercontent.com/u/41995646?v=4", + "description": null, "topics": [] }, { - "uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", - "url": "https://github.com/DreamCloud-Project/McSim-Cycle-accurate-Xbar", - "rel": "/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", - "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", - "description": "Manycore platform Simulation tool for crossbar-based platform at a Cycle-accurate level", + "uid": "github/liushang17/AEnet", + "url": "https://github.com/liushang17/AEnet", + "rel": "/software/repository/github/liushang17/AEnet", + "avatar": "https://avatars.githubusercontent.com/u/34593951?v=4", + "description": "This study constructs two new methods to study alternative splicing events at the single-cell level, namely DESJ-detection and AEN. DESJ-detection can detect alternative splicing differences at the single-cell level. AEN can not only systematically analyze the relationship between alternative splicing events and cell states, but also detect alternative splicing events in the process of cell state changes. At the same time, AEN also optimized the ability of DESJ-detection to detect differential alternative splicing.", "topics": [] }, { - "uid": "github/DreamCloud-Project/McSim-TLM-NoC", - "url": "https://github.com/DreamCloud-Project/McSim-TLM-NoC", - "rel": "/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", - "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", - "description": "Manycore platform Simulation tool for NoC-based platform at a Transactional Level Modeling level", + "uid": "github/pmaxted/pycheops", + "url": "https://github.com/pmaxted/pycheops", + "rel": "/software/repository/github/pmaxted/pycheops", + "avatar": "https://avatars.githubusercontent.com/u/19465694?v=4", + "description": "Python module for the analysis of light curves from the ESA Cheops mission", "topics": [] }, { - "uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", - "url": "https://github.com/DreamCloud-Project/AMALTHEA-SimGrid", - "rel": "/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", - "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", - "description": "Simulator for cloud applications described using the Amalthea application model on top of SimGrid", - "topics": [] + "uid": "github/pymatting/pymatting", + "url": "https://github.com/pymatting/pymatting", + "rel": "/software/repository/github/pymatting/pymatting", + "avatar": "https://avatars0.githubusercontent.com/u/59248113?v=4", + "description": "A Python library for alpha matting", + "topics": [ + "alpha-matting", + "image-processing", + "foreground", + "python3" + ] }, { - "uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", - "url": "https://github.com/DreamCloud-Project/McSim-Cycle-accurate-NoC", - "rel": "/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", - "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", - "description": "Manycore platform Simulation tool for NoC-based platform at a Cycle-accurate level", + "uid": "github/NRDD-constraints/NRDD", + "url": "https://github.com/NRDD-constraints/NRDD", + "rel": "/software/repository/github/NRDD-constraints/NRDD", + "avatar": "https://avatars.githubusercontent.com/u/43461532?v=4", + "description": "A python tool for calculating the exclusion plot for Dark Matter interaction with the Standard Model in non-relativistic Effective Theory Models. ", "topics": [] }, { - "uid": "github/ska-sa/katdal", - "url": "https://github.com/ska-sa/katdal", - "rel": "/software/repository/github/ska-sa/katdal", - "avatar": "https://avatars.githubusercontent.com/u/1210238?v=4", - "description": "Data access library for the MeerKAT radio telescope", + "uid": "github/justincfeng/PoMiN", + "url": "https://github.com/justincfeng/PoMiN", + "rel": "/software/repository/github/justincfeng/PoMiN", + "avatar": "https://avatars.githubusercontent.com/u/37278639?v=4", + "description": "PoMiN is a Post-Minkowskian N-Body Solver", "topics": [] }, { - "uid": "github/ska-sa/hibayes", - "url": "https://github.com/ska-sa/hibayes", - "rel": "/software/repository/github/ska-sa/hibayes", - "avatar": "https://avatars.githubusercontent.com/u/1210238?v=4", - "description": "Reverend 21 work", + "uid": "github/varlociraptor/varlociraptorhub.io", + "url": null, + "rel": "/software/repository/github/varlociraptor/varlociraptorhub.io", + "avatar": "", + "description": "flexible, arbitrary-scenario, uncertainty-aware variant calling with parameter free filtration via FDR control.", "topics": [] }, { - "uid": "github/artis-mcrt/artis", - "url": "https://github.com/artis-mcrt/artis", - "rel": "/software/repository/github/artis-mcrt/artis", - "avatar": "https://avatars.githubusercontent.com/u/80631204?v=4", - "description": "3D Monte Carlo radiative transfer code for supernovae", + "uid": "github/metawards/MetaWards", + "url": "https://github.com/metawards/MetaWards", + "rel": "/software/repository/github/metawards/MetaWards", + "avatar": "https://avatars.githubusercontent.com/u/63117563?v=4", + "description": "MetaWards disease metapopulation analysis and modelling software. Professional geographical SIR model with a flexible plugin architecture to support complex scenario modelling", "topics": [ - "monte-carlo" + "epidemiology", + "epidemic-simulations", + "sir-model", + "epidemiology-analysis", + "epidemic-model", + "epidemics", + "covid-19", + "covid", + "coronavirus" ] }, { - "uid": "github/vanheeringen-lab/gimmemotifs", - "url": "https://github.com/vanheeringen-lab/gimmemotifs", - "rel": "/software/repository/github/vanheeringen-lab/gimmemotifs", - "avatar": "https://avatars.githubusercontent.com/u/42635190?v=4", - "description": "Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.", - "topics": [] - }, - { - "uid": "github/IRCAD/camp", - "url": "https://github.com/IRCAD/camp", - "rel": "/software/repository/github/IRCAD/camp", - "avatar": "https://avatars.githubusercontent.com/u/45239033?v=4", - "description": "C++ multi-purpose reflection library", + "uid": "github/cire-thk/BifacialSimu", + "url": "https://github.com/cire-thk/BifacialSimu", + "rel": "/software/repository/github/cire-thk/BifacialSimu", + "avatar": "https://avatars.githubusercontent.com/u/60656081?v=4", + "description": "Simulation of bifacial PV", "topics": [] }, { - "uid": "github/constantAmateur/SoupX", - "url": "https://github.com/constantAmateur/SoupX", - "rel": "/software/repository/github/constantAmateur/SoupX", - "avatar": "https://avatars2.githubusercontent.com/u/1410525?v=4", - "description": "R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data", + "uid": "github/RuiningZHAO/wcpy", + "url": "https://github.com/RuiningZHAO/wcpy", + "rel": "/software/repository/github/RuiningZHAO/wcpy", + "avatar": "https://avatars.githubusercontent.com/u/16609408?v=4", + "description": "A UI for wavelength calibration.", "topics": [] }, { - "uid": "github/rfeldmann/leopy", - "url": "https://github.com/rfeldmann/leopy", - "rel": "/software/repository/github/rfeldmann/leopy", - "avatar": "https://avatars.githubusercontent.com/u/11809604?v=4", - "description": "Likelihood Estimation of Observational data with Python", + "uid": "github/pratheesh3780/grapesAgri1", + "url": "https://github.com/pratheesh3780/grapesAgri1", + "rel": "/software/repository/github/pratheesh3780/grapesAgri1", + "avatar": "https://avatars.githubusercontent.com/u/67531873?v=4", + "description": "Collection of shiny apps for Agricultural research Data Analysis. Allows user to have graphical user interface to perform analysis of Agricultural experimental data. On using the functions in this package a Graphical User Interface will pop up. Apps Works by simple upload of files in CSV format.", "topics": [] }, { - "uid": "github/pmoulos/metaseqR2", - "url": "https://github.com/pmoulos/metaseqR2", - "rel": "/software/repository/github/pmoulos/metaseqR2", - "avatar": "https://avatars0.githubusercontent.com/u/2979517?v=4", - "description": "An R package for the analysis, meta-analysis and result reporting of RNA-Seq gene expression data - Next Generation!", - "topics": [] + "uid": "github/aarondotter/iso", + "url": "https://github.com/aarondotter/iso", + "rel": "/software/repository/github/aarondotter/iso", + "avatar": "https://avatars.githubusercontent.com/u/3239471?v=4", + "description": "MESA isochrone code", + "topics": [ + "stars", + "evolution", + "isochrones" + ] }, { - "uid": "github/he2016012996/CABnet", - "url": "https://github.com/he2016012996/CABnet", - "rel": "/software/repository/github/he2016012996/CABnet", - "avatar": "https://avatars.githubusercontent.com/u/47880931?v=4", - "description": null, + "uid": "github/CosmoStatGW/DarkSirensStat", + "url": "https://github.com/CosmoStatGW/DarkSirensStat", + "rel": "/software/repository/github/CosmoStatGW/DarkSirensStat", + "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", + "description": "Statistical method for measuring modified GW propagation and Hubble parameter with dark sirens and galaxy catalogues", "topics": [] }, { - "uid": "github/pharo-project/pharo", - "url": "https://github.com/pharo-project/pharo", - "rel": "/software/repository/github/pharo-project/pharo", - "avatar": "https://avatars.githubusercontent.com/u/1838382?v=4", - "description": "Pharo is a dynamic reflective pure object-oriented language supporting live programming inspired by Smalltalk.", - "topics": [ - "pharo", - "reflective", - "language", - "tools", - "bootstrap", - "object-oriented-programming", - "live-programming", - "mit" - ] - }, - { - "uid": "github/bthorne93/PySM_public", - "url": "https://github.com/bthorne93/PySM_public", - "rel": "/software/repository/github/bthorne93/PySM_public", - "avatar": "https://avatars.githubusercontent.com/u/16899444?v=4", - "description": "PySM: Software for simulating the Galactic microwave sky", + "uid": "github/CosmoStatGW/gwfast", + "url": "https://github.com/CosmoStatGW/gwfast", + "rel": "/software/repository/github/CosmoStatGW/gwfast", + "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", + "description": "A Fisher information matrix python package for GW detector networks.", "topics": [ - "dust", - "polarization", - "planck", - "intensity", - "ame", - "sky", - "cmb" + "automatic-differentiation", + "fisher-information", + "gravitational-waves", + "jax", + "python" ] }, { - "uid": "github/IAMconsortium/pyam", - "url": "https://github.com/IAMconsortium/pyam", - "rel": "/software/repository/github/IAMconsortium/pyam", - "avatar": "https://avatars.githubusercontent.com/u/19565808?v=4", - "description": "Analysis & visualization of energy & climate scenarios", + "uid": "github/CosmoStatGW/MGCosmoPop", + "url": "https://github.com/CosmoStatGW/MGCosmoPop", + "rel": "/software/repository/github/CosmoStatGW/MGCosmoPop", + "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", + "description": "Modified Gravity and Cosmology with Binary Black Holes' Population models : hierarchical bayesian method for constraining modified GW propagation and BBH population models with GWs.", "topics": [ - "integrated-assessment", - "scenario", - "analysis", - "iamc-format", - "visualization", - "macro-energy", - "energy-systems", - "modeling", - "timeseries-format", - "integrated-assessment-scenarios", - "scenario-data", - "pyam" + "gravitational-waves", + "hierarchical-bayesian-analysis", + "cosmology" ] }, { - "uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", - "url": "https://github.com/Aarhus-Psychiatry-Research/timeseriesflattener", - "rel": "/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", - "avatar": "https://avatars.githubusercontent.com/u/81359711?v=4", - "description": "A package for converting irregularly spaced time series, such as eletronic health records, into statically shaped dataframes. ", + "uid": "github/CosmoStatGW/WF4Py", + "url": "https://github.com/CosmoStatGW/WF4Py", + "rel": "/software/repository/github/CosmoStatGW/WF4Py", + "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", + "description": "Gravitational waves waveform models in pure Python language", "topics": [ - "electronic-healthcare-data", - "machine-learning", - "time-series-analysis", - "irregular-time-series", - "python", - "python3" + "gravitational-waves", + "waveforms" ] }, + { + "uid": "github/Guo-Jian-Wang/colfi", + "url": "https://github.com/Guo-Jian-Wang/colfi", + "rel": "/software/repository/github/Guo-Jian-Wang/colfi", + "avatar": "https://avatars.githubusercontent.com/u/50233380?v=4", + "description": "Likelihood-free Inference with neural density estimators", + "topics": [] + }, { "uid": "github/isovic/graphmap", "url": "https://github.com/isovic/graphmap", @@ -33508,9518 +32226,9795 @@ "topics": [] }, { - "uid": "github/erling6232/imagedata", - "url": "https://github.com/erling6232/imagedata", - "rel": "/software/repository/github/erling6232/imagedata", - "avatar": "https://avatars.githubusercontent.com/u/26794739?v=4", - "description": "Read/write medical image data", + "uid": "github/flyaflya/causact", + "url": "https://github.com/flyaflya/causact", + "rel": "/software/repository/github/flyaflya/causact", + "avatar": "https://avatars.githubusercontent.com/u/17184441?v=4", + "description": "causact: R package to accelerate Bayesian analytics workflows.", "topics": [] }, { - "uid": "github/refresh-bio/agc", - "url": "https://github.com/refresh-bio/agc", - "rel": "/software/repository/github/refresh-bio/agc", - "avatar": "https://avatars.githubusercontent.com/u/16046310?v=4", - "description": "Assembled Genomes Compressor", + "uid": "github/bolverk/huji-rich", + "url": "https://github.com/bolverk/huji-rich", + "rel": "/software/repository/github/bolverk/huji-rich", + "avatar": "https://avatars.githubusercontent.com/u/5267267?v=4", + "description": "A hydrodynamic simulation on a moving mesh", "topics": [] }, { - "uid": "github/refresh-bio/whisper", - "url": "https://github.com/refresh-bio/Whisper", - "rel": "/software/repository/github/refresh-bio/whisper", - "avatar": "https://avatars3.githubusercontent.com/u/16046310?v=4", - "description": null, + "uid": "github/ianfhunter/GNOLL", + "url": "https://github.com/ianfhunter/GNOLL", + "rel": "/software/repository/github/ianfhunter/GNOLL", + "avatar": "https://avatars.githubusercontent.com/u/1540737?v=4", + "description": "GNOLL is an efficient dice notation parser for multiple programming languages that supports a wide set of dice notation", + "topics": [ + "dice", + "dice-roller", + "dice-notation", + "board-game", + "c", + "cpp", + "dice-rolls", + "python", + "roleplaying-games", + "ttrpg", + "perl", + "golang", + "javascript", + "go", + "js", + "rpg-dice-roller", + "julia", + "r", + "java", + "haskell" + ] + }, + { + "uid": "github/skovaka/UNCALLED", + "url": "https://github.com/skovaka/UNCALLED", + "rel": "/software/repository/github/skovaka/UNCALLED", + "avatar": "https://avatars.githubusercontent.com/u/1577544?v=4", + "description": "Raw nanopore signal mapper that enables real-time targeted sequencing", "topics": [] }, { - "uid": "github/RaRe-Technologies/gensim", - "url": "https://github.com/RaRe-Technologies/gensim", - "rel": "/software/repository/github/RaRe-Technologies/gensim", - "avatar": "https://avatars3.githubusercontent.com/u/12515886?v=4", - "description": "Topic Modelling for Humans", + "uid": "github/subhk/BiGSTARS.jl", + "url": "https://github.com/subhk/BiGSTARS.jl", + "rel": "/software/repository/github/subhk/BiGSTARS.jl", + "avatar": "https://avatars.githubusercontent.com/u/13347479?v=4", + "description": "A Julia toolkit for bi-global linear stability analysis for geophysical flows using Chebyshev-Fourier spectral collocation method.", + "topics": [] + }, + { + "uid": "github/pyro-ppl/pyro", + "url": "https://github.com/pyro-ppl/pyro", + "rel": "/software/repository/github/pyro-ppl/pyro", + "avatar": "https://avatars.githubusercontent.com/u/46794900?v=4", + "description": "Deep universal probabilistic programming with Python and PyTorch", "topics": [ - "gensim", - "topic-modeling", - "information-retrieval", - "machine-learning", - "natural-language-processing", - "nlp", - "data-science", "python", - "data-mining", - "word2vec", - "word-embeddings", - "neural-network", - "document-similarity", - "word-similarity", - "fasttext" + "pytorch", + "machine-learning", + "bayesian", + "probabilistic-programming", + "bayesian-inference", + "variational-inference", + "probabilistic-modeling", + "deep-learning" ] }, { - "uid": "github/telegraphic/fits2hdf", - "url": "https://github.com/telegraphic/fits2hdf", - "rel": "/software/repository/github/telegraphic/fits2hdf", - "avatar": "https://avatars.githubusercontent.com/u/713251?v=4", - "description": "FITS to HDFITS conversion utility", + "uid": "github/pyro-ppl/numpyro", + "url": "https://github.com/pyro-ppl/numpyro", + "rel": "/software/repository/github/pyro-ppl/numpyro", + "avatar": "https://avatars.githubusercontent.com/u/46794900?v=4", + "description": "Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.", + "topics": [ + "pyro", + "jax", + "hmc", + "inference-algorithms", + "numpy", + "bayesian-inference", + "probabilistic-programming", + "mcmc" + ] + }, + { + "uid": "github/OxES/k2sc", + "url": "https://github.com/OxES/k2sc", + "rel": "/software/repository/github/OxES/k2sc", + "avatar": "https://avatars.githubusercontent.com/u/2815367?v=4", + "description": "K2 systematics correction using Gaussian processes", + "topics": [ + "exoplanets", + "exoplanet-transits", + "kepler", + "k2", + "k2-light-curves", + "astronomy", + "gaussian-processes", + "mast-light-curve" + ] + }, + { + "uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", + "url": "https://github.com/Julian-Sommer/chen-dai-2025-lightcurve-model", + "rel": "/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", + "avatar": "https://avatars.githubusercontent.com/u/65716879?v=4", + "description": "This code generates lightcurves based on the theoretical model of electromagnetic counterparts of BBH mergers embedded in AGN disks from Chen & Dai (2025), ApJ, 987, 214.", "topics": [] }, { - "uid": "github/telegraphic/pygsm", - "url": "https://github.com/telegraphic/PyGSM", - "rel": "/software/repository/github/telegraphic/pygsm", - "avatar": "https://avatars.githubusercontent.com/u/713251?v=4", - "description": "Python implementation of the Global Sky Model (GSM) for the radio sky between 10 MHz - 5 THz", + "uid": "github/bionlplab/GlaucomaNet", + "url": "https://github.com/bionlplab/GlaucomaNet", + "rel": "/software/repository/github/bionlplab/GlaucomaNet", + "avatar": "https://avatars.githubusercontent.com/u/64240964?v=4", + "description": "A deep-learning algorithm for the diagnosis of primary open-angle glaucoma from fundus photographs", "topics": [] }, { - "uid": "github/STAR-Fusion/STAR-Fusion", - "url": "https://github.com/STAR-Fusion/STAR-Fusion", - "rel": "/software/repository/github/STAR-Fusion/STAR-Fusion", - "avatar": "https://avatars.githubusercontent.com/u/11923838?v=4", - "description": "STAR-Fusion codebase", + "uid": "github/DrSoulain/PREVIS", + "url": "https://github.com/DrSoulain/PREVIS", + "rel": "/software/repository/github/DrSoulain/PREVIS", + "avatar": "https://avatars.githubusercontent.com/u/11616707?v=4", + "description": "Python Request Engine for Virtual Interferometric Survey", + "topics": [ + "astronomy", + "interferometry", + "observational-data" + ] + }, + { + "uid": "github/tne-lab/py-behav-box-v2", + "url": "https://github.com/tne-lab/py-behav-box-v2", + "rel": "/software/repository/github/tne-lab/py-behav-box-v2", + "avatar": "https://avatars.githubusercontent.com/u/30088789?v=4", + "description": "Pybehave is an open source software interface and framework for controlling behavioral experiments in neuroscience and psychology.", "topics": [] }, { - "uid": "github/MASILab/pyPheWAS", - "url": "https://github.com/MASILab/pyPheWAS", - "rel": "/software/repository/github/MASILab/pyPheWAS", - "avatar": "https://avatars.githubusercontent.com/u/34776698?v=4", - "description": "MASI Lab Implementation of PheWAS in Python", + "uid": "github/khowe/quick", + "url": null, + "rel": "/software/repository/github/khowe/quick", + "avatar": "", + "description": "an efficient implementation of the Neighbor-Joining algorithm.", "topics": [] }, { - "uid": "github/suneeshjacob/ACRoD", - "url": "https://github.com/suneeshjacob/ACRoD", - "rel": "/software/repository/github/suneeshjacob/ACRoD", - "avatar": "https://avatars.githubusercontent.com/u/20991408?v=4", - "description": "Automatic Computation for Robot Design", + "uid": "github/khowe/quicktree", + "url": "https://github.com/khowe/quicktree", + "rel": "/software/repository/github/khowe/quicktree", + "avatar": "https://avatars.githubusercontent.com/u/708483?v=4", + "description": "Fast implementation of the neighbour-joining phylogenetic inference method", "topics": [] }, { - "uid": "github/clawpack/pyclaw", - "url": "https://github.com/clawpack/pyclaw", - "rel": "/software/repository/github/clawpack/pyclaw", - "avatar": "https://avatars3.githubusercontent.com/u/725474?v=4", - "description": "PyClaw is a Python-based interface to the algorithms of Clawpack and SharpClaw. It also contains the PetClaw package, which adds parallelism through PETSc.", + "uid": "github/SteveMacenski/slam_toolbox", + "url": "https://github.com/SteveMacenski/slam_toolbox", + "rel": "/software/repository/github/SteveMacenski/slam_toolbox", + "avatar": "https://avatars.githubusercontent.com/u/14944147?v=4", + "description": "Slam Toolbox for lifelong mapping and localization in potentially massive maps with ROS", "topics": [] }, { - "uid": "github/clawpack/clawpack", - "url": "https://github.com/clawpack/clawpack", - "rel": "/software/repository/github/clawpack/clawpack", - "avatar": "https://avatars3.githubusercontent.com/u/725474?v=4", - "description": "Package for solving hyperbolic systems of partial differential equations", + "uid": "github/ScionResearch/genomesizeR", + "url": "https://github.com/ScionResearch/genomesizeR", + "rel": "/software/repository/github/ScionResearch/genomesizeR", + "avatar": "https://avatars.githubusercontent.com/u/18411016?v=4", + "description": "R package for genome size prediction", "topics": [] }, { - "uid": "github/kylejgillett/sounderpy", - "url": "https://github.com/kylejgillett/sounderpy", - "rel": "/software/repository/github/kylejgillett/sounderpy", - "avatar": "https://avatars.githubusercontent.com/u/100786530?v=4", - "description": "SounderPy is an open-source Python package for retrieving, processing, and visualizing atmospheric sounding data.", - "topics": [ - "data-analysis-python", - "meteorology", - "python", - "weather", - "weather-data", - "atmospheric-science", - "atmospheric-sciences" - ] + "uid": "github/AndreNicolasChene/DRAGRACES", + "url": "https://github.com/AndreNicolasChene/DRAGRACES", + "rel": "/software/repository/github/AndreNicolasChene/DRAGRACES", + "avatar": "https://avatars.githubusercontent.com/u/22158780?v=4", + "description": "Reduction pipeline for GRACES spectra (Gemini spectrograph)", + "topics": [] }, { - "uid": "github/econ-ark/HARK", - "url": "https://github.com/econ-ark/HARK", - "rel": "/software/repository/github/econ-ark/HARK", - "avatar": "https://avatars2.githubusercontent.com/u/19330676?v=4", - "description": "Heterogenous Agents Resources & toolKit", + "uid": "github/robertwissing/EOS", + "url": "https://github.com/robertwissing/EOS", + "rel": "/software/repository/github/robertwissing/EOS", + "avatar": "https://avatars.githubusercontent.com/u/32805862?v=4", + "description": null, "topics": [] }, { - "uid": "github/poissonconsulting/bbousuite", - "url": "https://github.com/poissonconsulting/bbousuite", - "rel": "/software/repository/github/poissonconsulting/bbousuite", - "avatar": "https://avatars.githubusercontent.com/u/1679318?v=4", - "description": "Easily install and load bbou (boreal caribou) R packages", + "uid": "github/yatiml/yatiml", + "url": "https://github.com/yatiml/yatiml", + "rel": "/software/repository/github/yatiml/yatiml", + "avatar": "https://avatars3.githubusercontent.com/u/42937038?v=4", + "description": "Python library for YAML type inference, schema checking and syntactic sugar", "topics": [] }, { - "uid": "github/poissonconsulting/bisonpicsuite", - "url": "https://github.com/poissonconsulting/bisonpicsuite", - "rel": "/software/repository/github/poissonconsulting/bisonpicsuite", - "avatar": "https://avatars.githubusercontent.com/u/1679318?v=4", - "description": "Loads the three bisonpic packages (bisonpictools, shinybisonpic, and runbisonpic)", + "uid": "github/mathworks/Simscape-Medical-Ventilator", + "url": "https://github.com/mathworks/Simscape-Medical-Ventilator", + "rel": "/software/repository/github/mathworks/Simscape-Medical-Ventilator", + "avatar": "https://avatars.githubusercontent.com/u/8590076?v=4", + "description": "Positive-pressure medical ventilator system using Simscape\u2122", "topics": [] }, { - "uid": "github/pyiron/executorlib", - "url": "https://github.com/pyiron/executorlib", - "rel": "/software/repository/github/pyiron/executorlib", - "avatar": "https://avatars.githubusercontent.com/u/25691954?v=4", - "description": "Up-scale python functions for high performance computing (HPC)", - "topics": [ - "hpc", - "mpi", - "mpi4py", - "multiprocessing", - "pyiron" - ] + "uid": "github/vimc/vaultr", + "url": "https://github.com/vimc/vaultr", + "rel": "/software/repository/github/vimc/vaultr", + "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", + "description": ":lock: API client for Hashicorp's vault (https://www.vaultproject.io/)", + "topics": [] }, { - "uid": "github/Deyht/CIANNA", - "url": "https://github.com/Deyht/CIANNA", - "rel": "/software/repository/github/Deyht/CIANNA", - "avatar": "https://avatars.githubusercontent.com/u/21009408?v=4", - "description": "Convolutional Interactive Artificial Neural Networks by/for Astrophysicists", - "topics": [ - "deep-neural-networks", - "deep-learning", - "convolutional-neural-networks", - "machine-learning", - "ml", - "astrophysics", - "astronomy", - "neural-network", - "cuda", - "gpu", - "object-detection", - "yolo" - ] + "uid": "github/vimc/dettl", + "url": "https://github.com/vimc/dettl", + "rel": "/software/repository/github/vimc/dettl", + "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", + "description": ":bar_chart::shower: Data extract, transform, test and load", + "topics": [] }, { - "uid": "github/pyranges/pyrle", - "url": "https://github.com/pyranges/pyrle", - "rel": "/software/repository/github/pyranges/pyrle", - "avatar": "https://avatars.githubusercontent.com/u/49520481?v=4", - "description": "Numerical Run Length Encoding and Arithmetic in Cython", + "uid": "github/vimc/orderly", + "url": "https://github.com/vimc/orderly", + "rel": "/software/repository/github/vimc/orderly", + "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", + "description": ":hospital::ambulance: Lightweight Reproducible Reporting for R", "topics": [] }, { - "uid": "github/SeamusClarke/FragMent", - "url": "https://github.com/SeamusClarke/FragMent", - "rel": "/software/repository/github/SeamusClarke/FragMent", - "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", - "description": "A collection of fragmentation techniques for studying filaments", + "uid": "github/AlexanderLabWHOI/EUKulele", + "url": "https://github.com/AlexanderLabWHOI/EUKulele", + "rel": "/software/repository/github/AlexanderLabWHOI/EUKulele", + "avatar": "https://avatars0.githubusercontent.com/u/44212672?v=4", + "description": "Automatic eukaryotic taxonomic classification", "topics": [] }, { - "uid": "github/SeamusClarke/BTS", - "url": "https://github.com/SeamusClarke/BTS", - "rel": "/software/repository/github/SeamusClarke/BTS", - "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", - "description": "Behind The Spectrum (BTS) fitter ", + "uid": "github/CoastEgo/microlux", + "url": "https://github.com/CoastEgo/microlux", + "rel": "/software/repository/github/CoastEgo/microlux", + "avatar": "https://avatars.githubusercontent.com/u/117350929?v=4", + "description": "Implementation of automatic differentiation in VBozza's BinaryLensing", "topics": [ - "astrophysics", - "fitting-algorithm", - "spectra" + "astronomy", + "jax", + "microlensing", + "gravitational-lensing" ] }, { - "uid": "github/linDing-groups/Deep-4mCW2V", - "url": "https://github.com/linDing-groups/Deep-4mCW2V", - "rel": "/software/repository/github/linDing-groups/Deep-4mCW2V", - "avatar": "https://avatars.githubusercontent.com/u/72026915?v=4", - "description": "A sequence-based deep learning approach to predict N4-methylcytosine sites in Escherichia coli ", + "uid": "github/nekStab/LightKrylov", + "url": "https://github.com/nekStab/LightKrylov", + "rel": "/software/repository/github/nekStab/LightKrylov", + "avatar": "https://avatars.githubusercontent.com/u/97961581?v=4", + "description": "Lightweight implementation of Krylov subspace techniques in Fortran.", "topics": [] }, { - "uid": "github/timchurches/NetEpi-Collection", - "url": "https://github.com/timchurches/NetEpi-Collection", - "rel": "/software/repository/github/timchurches/NetEpi-Collection", - "avatar": "https://avatars.githubusercontent.com/u/2859105?v=4", - "description": "Communicable disease and epidemiological data collection and management system", - "topics": [] + "uid": "github/wouterpeere/GHEtool", + "url": "https://github.com/wouterpeere/GHEtool", + "rel": "/software/repository/github/wouterpeere/GHEtool", + "avatar": "https://avatars.githubusercontent.com/u/52632307?v=4", + "description": "GHEtool is an open-source tool for borefield sizing and ground temperature evolution plotting.", + "topics": [ + "geothermal-energy", + "borefields", + "sizing", + "energy", + "storage", + "geothermal" + ] }, { - "uid": "github/timchurches/NetEpi-Analysis", - "url": "https://github.com/timchurches/NetEpi-Analysis", - "rel": "/software/repository/github/timchurches/NetEpi-Analysis", - "avatar": "https://avatars.githubusercontent.com/u/2859105?v=4", - "description": "Web-based object-oriented data exploration and analysis system", - "topics": [] + "uid": "github/rajeshrinet/pystokes", + "url": "https://github.com/rajeshrinet/pystokes", + "rel": "/software/repository/github/rajeshrinet/pystokes", + "avatar": "https://avatars2.githubusercontent.com/u/5037991?v=4", + "description": "PyStokes: phoresis and Stokesian hydrodynamics in Python: https://github.com/rajeshrinet/pystokes", + "topics": [ + "hydrodynamic-interactions", + "phoretic-interactions", + "force-fields", + "stokesian-hydrodynamics", + "active-particles", + "colloids", + "stokes-flow", + "traction", + "python", + "cython", + "phase-separation", + "crystallization", + "pystokes", + "active-colloids", + "autophoretic-suspensions" + ] }, { - "uid": "github/johnlees/pp-sketchlib", - "url": "https://github.com/bacpop/pp-sketchlib", - "rel": "/software/repository/github/johnlees/pp-sketchlib", - "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", - "description": "Library of sketching functions used by PopPUNK", + "uid": "github/erikhom/aida", + "url": "https://github.com/erikhom/aida", + "rel": "/software/repository/github/erikhom/aida", + "avatar": "https://avatars.githubusercontent.com/u/4625918?v=4", + "description": "Code for the Adaptive Image Deconvolution Algorithm (AIDA) of Hom et al. (2007) J. Opt. Soc. Amer. A", "topics": [] }, { - "uid": "github/johnlees/PopPUNK", - "url": "https://github.com/bacpop/PopPUNK", - "rel": "/software/repository/github/johnlees/PopPUNK", - "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", - "description": "PopPUNK \ud83d\udc68\u200d\ud83c\udfa4 (POPulation Partitioning Using Nucleotide Kmers)", + "uid": "github/thorstone25/qups", + "url": "https://github.com/thorstone25/qups", + "rel": "/software/repository/github/thorstone25/qups", + "avatar": "https://avatars.githubusercontent.com/u/10552188?v=4", + "description": "A MATLAB toolbox for prototyping and simulating diagnostic ultrasound imaging systems", "topics": [ - "bacteria", - "genomics", - "population-genetics", - "k-mer", - "sketching" + "matlab", + "matlab-toolbox", + "prototyping", + "ultrasound-imaging", + "imaging", + "toolbox", + "ultrasound", + "digital-signal-processing", + "signal-processing" ] }, { - "uid": "github/johnlees/seer", - "url": "https://github.com/johnlees/seer", - "rel": "/software/repository/github/johnlees/seer", - "avatar": "https://avatars.githubusercontent.com/u/6331837?v=4", - "description": "sequence element (kmer) enrichment analysis", + "uid": "github/byuflowlab/GXBeam.jl", + "url": "https://github.com/byuflowlab/GXBeam.jl", + "rel": "/software/repository/github/byuflowlab/GXBeam.jl", + "avatar": "https://avatars.githubusercontent.com/u/10734941?v=4", + "description": "Pure Julia Implementation of Geometrically Exact Beam Theory", "topics": [ - "gwas", - "bacteria", - "k-mer" + "gebt", + "beam-elements", + "finite-element-analysis", + "julia", + "nonlinear" ] }, { - "uid": "github/dh4gan/taktent", - "url": "https://github.com/dh4gan/taktent", - "rel": "/software/repository/github/dh4gan/taktent", - "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", - "description": "A Python framework for agent-based simulations of (radio) SETI observations", - "topics": [ - "seti", - "agent-based", - "simulator", - "extraterrestrial", - "intelligence" - ] + "uid": "github/FluidityProject/fluidity", + "url": "https://github.com/FluidityProject/fluidity", + "rel": "/software/repository/github/FluidityProject/fluidity", + "avatar": "https://avatars.githubusercontent.com/u/7604133?v=4", + "description": "Fluidity", + "topics": [] }, { - "uid": "github/dh4gan/oberon", - "url": "https://github.com/dh4gan/oberon", - "rel": "/software/repository/github/dh4gan/oberon", - "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", - "description": "This C++ code models the climate of Earthlike planets under the effects of an arbitrary number and arrangement of other bodies, such as stars, planets and moons.", + "uid": "github/garrelt/C2-Ray3Dm1D_Helium", + "url": "https://github.com/garrelt/C2-Ray3Dm1D_Helium", + "rel": "/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", + "avatar": "https://avatars.githubusercontent.com/u/856731?v=4", + "description": "C2-Ray radiative transfer / photo-ionziation code, version with helium, combining 1D and 3D", "topics": [ - "climate", - "planet", - "star", - "astrophysics", - "simulation" + "cosmic-dawn", + "reionization", + "cosmology", + "radiative-transfer" ] }, { - "uid": "github/dh4gan/grapus", - "url": "https://github.com/dh4gan/grapus", - "rel": "/software/repository/github/dh4gan/grapus", - "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", - "description": "Population synthesis of self-gravitating disc fragmentation and tidal downsizing in protostellar discs", + "uid": "github/garrelt/C2-Ray1D", + "url": "https://github.com/garrelt/C2-Ray1D", + "rel": "/software/repository/github/garrelt/C2-Ray1D", + "avatar": "https://avatars.githubusercontent.com/u/856731?v=4", + "description": "1D version of C2-Ray", "topics": [] }, { - "uid": "github/dh4gan/tache", - "url": "https://github.com/dh4gan/tache", - "rel": "/software/repository/github/dh4gan/tache", - "avatar": "https://avatars.githubusercontent.com/u/2436460?v=4", - "description": "TensoriAl Classification of Hydrodynamic Elements", + "uid": "github/FrederickHuangLin/ANCOMBC", + "url": "https://github.com/FrederickHuangLin/ANCOMBC", + "rel": "/software/repository/github/FrederickHuangLin/ANCOMBC", + "avatar": "https://avatars.githubusercontent.com/u/7278887?v=4", + "description": "Differential abundance (DA) and correlation analyses for microbial absolute abundance data", "topics": [ - "sph", - "simulation", - "tensor", - "hydrodynamics" + "ancom", + "differential-abundance-analysis", + "microbiome", + "normalization", + "sequencing", + "correlation", + "secom", + "ancombc", + "ancombc2" ] }, { - "uid": "github/ynop/audiomate", - "url": "https://github.com/ynop/audiomate", - "rel": "/software/repository/github/ynop/audiomate", - "avatar": "https://avatars0.githubusercontent.com/u/5406826?v=4", - "description": "Python library for handling audio datasets.", + "uid": "github/brocklab/pycashier", + "url": "https://github.com/brocklab/pycashier", + "rel": "/software/repository/github/brocklab/pycashier", + "avatar": "https://avatars.githubusercontent.com/u/41652738?v=4", + "description": "cash in on DNA barcode tags", "topics": [ - "audio", - "speech-recognition", - "corpus-tools", - "dataset-manager", - "audio-datasets", - "data-loader", - "dataset-filtering", - "dataset-creation", - "speech", - "music", - "noise" + "bioinformatics", + "pipeline" ] }, { - "uid": "github/folsomcp/specpolFlow", - "url": "https://github.com/folsomcp/specpolFlow", - "rel": "/software/repository/github/folsomcp/specpolFlow", - "avatar": "https://avatars.githubusercontent.com/u/26417587?v=4", - "description": "Tools and tutorials for the analysis of stellar spectropolarimetric observations.", + "uid": "github/rhernandvel/ViromeXplore", + "url": "https://github.com/rhernandvel/ViromeXplore", + "rel": "/software/repository/github/rhernandvel/ViromeXplore", + "avatar": "https://avatars.githubusercontent.com/u/115227890?v=4", + "description": "Nextflow workflow for the analysis and discovery of viral sequences from metagenomes and viromes", "topics": [] }, { - "uid": "github/PENTACLE-Team/PENTACLE", - "url": "https://github.com/PENTACLE-Team/PENTACLE", - "rel": "/software/repository/github/PENTACLE-Team/PENTACLE", - "avatar": "https://avatars.githubusercontent.com/u/23567420?v=4", - "description": null, + "uid": "github/vsbuffalo/scythe", + "url": "https://github.com/vsbuffalo/scythe", + "rel": "/software/repository/github/vsbuffalo/scythe", + "avatar": "https://avatars.githubusercontent.com/u/160549?v=4", + "description": "A 3'-end adapter contaminant trimmer", "topics": [] }, { - "uid": "github/riogroup/SORA", - "url": "https://github.com/riogroup/SORA", - "rel": "/software/repository/github/riogroup/SORA", - "avatar": "https://avatars.githubusercontent.com/u/64388000?v=4", - "description": null, + "uid": "github/perfanalytics/pose2sim", + "url": "https://github.com/perfanalytics/pose2sim", + "rel": "/software/repository/github/perfanalytics/pose2sim", + "avatar": "https://avatars.githubusercontent.com/u/106652625?v=4", + "description": "Markerless kinematics, from OpenPose to OpenSim", + "topics": [ + "kinematics", + "markerless", + "openpose", + "opensim", + "3d-kinematics", + "biomechanics", + "motion-capture", + "pose-estimation", + "sports" + ] + }, + { + "uid": "github/ProfessorBrunner/rc3-pipeline", + "url": "https://github.com/ProfessorBrunner/rc3-pipeline", + "rel": "/software/repository/github/ProfessorBrunner/rc3-pipeline", + "avatar": "https://avatars.githubusercontent.com/u/2030065?v=4", + "description": "Make digital images of RC3 galaxies by using final, calibrated SDSS images", "topics": [] }, { - "uid": "github/parsotat/batanalysis", - "url": "https://github.com/parsotat/BatAnalysis", - "rel": "/software/repository/github/parsotat/batanalysis", - "avatar": "https://avatars.githubusercontent.com/u/25468716?v=4", - "description": "A python HEASOFT wrapper for processing Swift-BAT data.", + "uid": "github/carlosandrepaes/GaPP", + "url": "https://github.com/carlosandrepaes/GaPP", + "rel": "/software/repository/github/carlosandrepaes/GaPP", + "avatar": "https://avatars.githubusercontent.com/u/9978975?v=4", + "description": "Gaussian Processes GaPP code auxiliary repository ", "topics": [] }, { - "uid": "github/sherpa-deproject/deproject", - "url": "https://github.com/sherpa-deproject/deproject", - "rel": "/software/repository/github/sherpa-deproject/deproject", - "avatar": "https://avatars.githubusercontent.com/u/47479958?v=4", - "description": "CIAO Sherpa extension package for deprojection of two-dimensional annular X-ray spectra to recover the three-dimensional source properties.", + "uid": "github/wf4ever/astrotaverna", + "url": "https://github.com/wf4ever/astrotaverna", + "rel": "/software/repository/github/wf4ever/astrotaverna", + "avatar": "https://avatars.githubusercontent.com/u/557448?v=4", + "description": "Astronomy plugins for Taverna Workbench", "topics": [] }, { - "uid": "github/VILLASframework/node", - "url": "https://github.com/VILLASframework/node", - "rel": "/software/repository/github/VILLASframework/node", - "avatar": "https://avatars.githubusercontent.com/u/33834284?v=4", - "description": "Connecting real-time power grid simulation equipment", - "topics": [ - "simulation", - "villas" - ] + "uid": "github/Pranab-JD/LeXInt", + "url": "https://github.com/Pranab-JD/LeXInt", + "rel": "/software/repository/github/Pranab-JD/LeXInt", + "avatar": "https://avatars.githubusercontent.com/u/61944428?v=4", + "description": "Leja Exponential Integrators", + "topics": [] }, { - "uid": "github/tingyuansen/The_Payne", - "url": "https://github.com/tingyuansen/The_Payne", - "rel": "/software/repository/github/tingyuansen/The_Payne", - "avatar": "https://avatars.githubusercontent.com/u/1833554?v=4", - "description": null, + "uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", + "url": "https://github.com/Pranab-JD/iPIC3D-CPU-SPACE-CoE", + "rel": "/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", + "avatar": "https://avatars.githubusercontent.com/u/61944428?v=4", + "description": "the CPU version of iPIC3D supporting MPI and OpenMP", "topics": [] }, { - "uid": "github/nksaunders/giants", - "url": "https://github.com/nksaunders/giants", - "rel": "/software/repository/github/nksaunders/giants", - "avatar": "https://avatars.githubusercontent.com/u/17130840?v=4", - "description": "Finding Giant Planets in TESS FFIs", + "uid": "github/tamarervin/SolAster", + "url": "https://github.com/tamarervin/SolAster", + "rel": "/software/repository/github/tamarervin/SolAster", + "avatar": "https://avatars.githubusercontent.com/u/53492021?v=4", + "description": "Python package to independently derive 'Sun-as-a-star' radial velocity variations.", "topics": [] }, { - "uid": "github/kathrinnp/DarkRayNet", - "url": "https://github.com/kathrinnp/DarkRayNet", - "rel": "/software/repository/github/kathrinnp/DarkRayNet", - "avatar": "https://avatars.githubusercontent.com/u/55040575?v=4", - "description": "Quick cosmic ray antiproton simulations for dark matter annihilation models using neural networks", + "uid": "github/kathlandgren/SWAMPE", + "url": "https://github.com/kathlandgren/SWAMPE", + "rel": "/software/repository/github/kathlandgren/SWAMPE", + "avatar": "https://avatars.githubusercontent.com/u/78450083?v=4", + "description": "2D spectral-core shallow-water exoplanet atmosphere model", "topics": [] }, { - "uid": "github/Nicole-DH/ACP-MLC", - "url": "https://github.com/Nicole-DH/ACP-MLC", - "rel": "/software/repository/github/Nicole-DH/ACP-MLC", - "avatar": "https://avatars.githubusercontent.com/u/58495382?v=4", - "description": "ACP-MLC: A two-level prediction engine for identification of anticancer peptides and multi-label classification of their functional types", + "uid": "github/pr2database/pr2-primers", + "url": "https://github.com/pr2database/pr2-primers", + "rel": "/software/repository/github/pr2database/pr2-primers", + "avatar": "https://avatars.githubusercontent.com/u/44997718?v=4", + "description": "Scripts for paper Vaulot et al. 2022", "topics": [ - "anticancer-peptides", - "machine-learning", - "multilabel-classification", - "sequence-analysis" + "database", + "18s-rrna", + "primers", + "eukaryotes", + "taxonomy", + "metabarcoding" ] }, { - "uid": "github/nathandecaux/labelprop", - "url": "https://github.com/nathandecaux/labelprop", - "rel": "/software/repository/github/nathandecaux/labelprop", - "avatar": "https://avatars.githubusercontent.com/u/50906750?v=4", + "uid": "github/jvc2688/K2-CPM", + "url": "https://github.com/jvc2688/K2-CPM", + "rel": "/software/repository/github/jvc2688/K2-CPM", + "avatar": "https://avatars.githubusercontent.com/u/4012293?v=4", "description": null, "topics": [] }, { - "uid": "github/Jacks0nJ/PyFPT", - "url": "https://github.com/Jacks0nJ/PyFPT", - "rel": "/software/repository/github/Jacks0nJ/PyFPT", - "avatar": "https://avatars.githubusercontent.com/u/73479437?v=4", - "description": "Stochastic first-passage time (FPT) simulations using importance sampling.", + "uid": "github/vprusso/toqito", + "url": "https://github.com/vprusso/toqito", + "rel": "/software/repository/github/vprusso/toqito", + "avatar": "https://avatars.githubusercontent.com/u/1562214?v=4", + "description": "|toqito> (Theory of Quantum Information Toolkit) in Python :snake:", "topics": [ - "cosmology", - "cython", - "first-passage-times", - "importance-sampling", - "inflation", - "stochastic" + "quantum-computing", + "python", + "quantum-information", + "matrix-analysis", + "python-3", + "unitaryhack", + "physics", + "quantum" ] }, { - "uid": "github/fjprichard/PyAFBF", - "url": "https://github.com/fjprichard/PyAFBF", - "rel": "/software/repository/github/fjprichard/PyAFBF", - "avatar": "https://avatars.githubusercontent.com/u/84329965?v=4", - "description": "A python library for sampling image textures from the anisotropic fractional Brownian field.", + "uid": "github/edgardomortiz/Captus", + "url": "https://github.com/edgardomortiz/Captus", + "rel": "/software/repository/github/edgardomortiz/Captus", + "avatar": "https://avatars.githubusercontent.com/u/5767612?v=4", + "description": "Assembly of Phylogenomic Datasets from High-Throughput Sequencing data", "topics": [ - "texture-synthesis", - "random-field", - "random-fields", - "image-synthesis", - "fractional-gaussian-noise", - "fractional-brownian-motion", - "anisotropy" + "ngs", + "phylogenomics", + "alignment", + "genome-skimming", + "high-throughput-sequencing", + "hybridization-capture", + "next-generation-sequencing", + "phylogenetics", + "rna-seq", + "whole-genome-sequencing", + "phylotranscriptomics", + "targeted-capture", + "orthologs", + "paralogs" ] }, { - "uid": "github/scikit-learn/scikit-learn", - "url": "https://github.com/scikit-learn/scikit-learn", - "rel": "/software/repository/github/scikit-learn/scikit-learn", - "avatar": "https://avatars2.githubusercontent.com/u/365630?v=4", - "description": "scikit-learn: machine learning in Python", + "uid": "github/mongibellili/QuantizedSystemSolver.jl", + "url": "https://github.com/mongibellili/QuantizedSystemSolver.jl", + "rel": "/software/repository/github/mongibellili/QuantizedSystemSolver.jl", + "avatar": "https://avatars.githubusercontent.com/u/59377156?v=4", + "description": "This is an ODE solver that implements the quantized state system methods: An approach that builds the solution by updating the system variables independently.", + "topics": [] + }, + { + "uid": "github/FrancesBW/bellamy", + "url": "https://github.com/FrancesBW/bellamy", + "rel": "/software/repository/github/FrancesBW/bellamy", + "avatar": "https://avatars.githubusercontent.com/u/38412724?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/bmorris3/aesop", + "url": "https://github.com/bmorris3/aesop", + "rel": "/software/repository/github/bmorris3/aesop", + "avatar": "https://avatars.githubusercontent.com/u/3497584?v=4", + "description": "ARC Echelle Spectroscopic Observation Pipeline (aesop)", "topics": [ - "machine-learning", "python", - "statistics", - "data-science", - "data-analysis" + "astronomy", + "spectroscopy" ] }, { - "uid": "github/aiidateam/aiida-core", - "url": "https://github.com/aiidateam/aiida-core", - "rel": "/software/repository/github/aiidateam/aiida-core", - "avatar": "https://avatars3.githubusercontent.com/u/22181836?v=4", - "description": "The official repository for the AiiDA code", - "topics": [ - "aiida", - "workflow", - "workflow-engine", - "provenance", - "database", - "ssh", - "scheduler", - "query-builder" - ] + "uid": "github/bmorris3/fleck", + "url": "https://github.com/bmorris3/fleck", + "rel": "/software/repository/github/bmorris3/fleck", + "avatar": "https://avatars.githubusercontent.com/u/3497584?v=4", + "description": "Fast approximate light curves for starspot rotational modulation", + "topics": [] }, { - "uid": "github/aiidateam/kiwipy", - "url": "https://github.com/aiidateam/kiwipy", - "rel": "/software/repository/github/aiidateam/kiwipy", - "avatar": "https://avatars3.githubusercontent.com/u/22181836?v=4", - "description": "A python messaging library for RPC, task queues and broadcasts", + "uid": "github/Bioinformatics-Munich/scas_dashboard", + "url": "https://github.com/Bioinformatics-Munich/scas_dashboard", + "rel": "/software/repository/github/Bioinformatics-Munich/scas_dashboard", + "avatar": "https://avatars.githubusercontent.com/u/116272517?v=4", + "description": "SCAS dashboard: A tool to intuitively and interactively analyze Slurm cluster usage", "topics": [] }, { - "uid": "github/markmbaum/GEOCLIM.jl", - "url": "https://github.com/markmbaum/GEOCLIM.jl", - "rel": "/software/repository/github/markmbaum/GEOCLIM.jl", - "avatar": "https://avatars.githubusercontent.com/u/18745581?v=4", - "description": "Estimation of global silicate weathering for paleoclimate and exoplanet climate applications", + "uid": "github/MichielCottaar/velbin", + "url": "https://github.com/MichielCottaar/velbin", + "rel": "/software/repository/github/MichielCottaar/velbin", + "avatar": "https://avatars.githubusercontent.com/u/4652580?v=4", + "description": "No relation to the Russian village", + "topics": [] + }, + { + "uid": "github/gerthmicha/wolbachia-mlst", + "url": "https://github.com/gerthmicha/wolbachia-mlst", + "rel": "/software/repository/github/gerthmicha/wolbachia-mlst", + "avatar": "https://avatars2.githubusercontent.com/u/17022831?v=4", + "description": "Data from Bleidorn & Gerth (2017) A critical re-evaluation of multilocus sequence typing (MLST) efforts in Wolbachia. https://doi.org/10.1093/femsec/fix163", + "topics": [] + }, + { + "uid": "github/herjy/SLIT", + "url": "https://github.com/herjy/SLIT", + "rel": "/software/repository/github/herjy/SLIT", + "avatar": "https://avatars.githubusercontent.com/u/16084926?v=4", + "description": "SLIT is a python code that provides a method for invertion of lensed images in the frame of strong gravitational lensing", + "topics": [] + }, + { + "uid": "github/mishioo/tesliper", + "url": "https://github.com/mishioo/tesliper", + "rel": "/software/repository/github/mishioo/tesliper", + "avatar": "https://avatars.githubusercontent.com/u/28956908?v=4", + "description": "Theoretical Spectroscopist's Little Helper", "topics": [ - "climate", - "weathering", - "paleoclimate", - "julia", - "exoplanets" + "python", + "chemistry", + "spectroscopy", + "chemical-computing", + "optical-spectroscopy", + "spectral-simulations", + "gaussian", + "workflow-automation", + "batch-processing" ] }, { - "uid": "github/torrance/pigi", - "url": "https://github.com/torrance/Pigi", - "rel": "/software/repository/github/torrance/pigi", - "avatar": "https://avatars.githubusercontent.com/u/90064?v=4", - "description": "Pigi (pronounced like 'piggy') is the parallel interfermetric GPU imager for producing images from radio astronomy observations.", + "uid": "github/RoelofBerg/limereg", + "url": "https://github.com/RoelofBerg/limereg", + "rel": "/software/repository/github/RoelofBerg/limereg", + "avatar": "https://avatars.githubusercontent.com/u/7037594?v=4", + "description": "Lightweight, derivative based, rigid, 2D Image Registration", "topics": [] }, { - "uid": "github/m-d-grunnill/MetaCast", - "url": "https://github.com/m-d-grunnill/MetaCast", - "rel": "/software/repository/github/m-d-grunnill/MetaCast", - "avatar": "https://avatars.githubusercontent.com/u/47453723?v=4", - "description": "A package for broadcasting epidimiological and ecological models over metapopulations.", + "uid": "github/gabo-di/AquaCrop.jl", + "url": "https://github.com/gabo-di/AquaCrop.jl", + "rel": "/software/repository/github/gabo-di/AquaCrop.jl", + "avatar": "https://avatars.githubusercontent.com/u/53311264?v=4", + "description": "FAO's Aqua Crop in Julia as part of Persefone.jl", "topics": [] }, { - "uid": "github/FINNGEN/lavaa-react", - "url": "https://github.com/FINNGEN/lavaa-react", - "rel": "/software/repository/github/FINNGEN/lavaa-react", - "avatar": "https://avatars.githubusercontent.com/u/33527341?v=4", - "description": "lavaa-react", + "uid": "github/EESI/Complet-Plus", + "url": "https://github.com/EESI/Complet-Plus", + "rel": "/software/repository/github/EESI/Complet-Plus", + "avatar": "https://avatars.githubusercontent.com/u/4440331?v=4", + "description": "Complet-Plus by Rachel Nguyen and Drexel EESI Lab", "topics": [] }, { - "uid": "github/vmplacco/linemake", - "url": "https://github.com/vmplacco/linemake", - "rel": "/software/repository/github/vmplacco/linemake", - "avatar": "https://avatars.githubusercontent.com/u/13039187?v=4", - "description": "linelist generator", + "uid": "github/meta-logic/sequoia", + "url": "https://github.com/meta-logic/sequoia", + "rel": "/software/repository/github/meta-logic/sequoia", + "avatar": "https://avatars.githubusercontent.com/u/11968006?v=4", + "description": "Design, play with, and analyze sequent calculus proof systems.", "topics": [] }, { - "uid": "github/vals/umis", - "url": "https://github.com/vals/umis", - "rel": "/software/repository/github/vals/umis", - "avatar": "https://avatars.githubusercontent.com/u/668803?v=4", - "description": "Tools for processing UMI RNA-tag data", + "uid": "github/zhanghe9704/tpsa", + "url": "https://github.com/zhanghe9704/tpsa", + "rel": "/software/repository/github/zhanghe9704/tpsa", + "avatar": "https://avatars.githubusercontent.com/u/8061962?v=4", + "description": "C++ and Python TPSA/DA codes", "topics": [] }, { - "uid": "github/low-sky/cprops", - "url": "https://github.com/low-sky/cprops", - "rel": "/software/repository/github/low-sky/cprops", - "avatar": "https://avatars.githubusercontent.com/u/1139910?v=4", - "description": "Rosolowsky and Leroy (2006) Algorithm", + "uid": "github/zhanghe9704/tpsa_sym", + "url": "https://github.com/zhanghe9704/tpsa_sym", + "rel": "/software/repository/github/zhanghe9704/tpsa_sym", + "avatar": "https://avatars.githubusercontent.com/u/8061962?v=4", + "description": null, "topics": [] }, { - "uid": "github/EvolOMICS-TU/ETENLNC", - "url": "https://github.com/EvolOMICS-TU/ETENLNC", - "rel": "/software/repository/github/EvolOMICS-TU/ETENLNC", - "avatar": "https://avatars.githubusercontent.com/u/113347720?v=4", - "description": "ETENLNC (End-To-End-Novel-NonCoding) lncRNA identification and analysis framework", + "uid": "github/sbmlteam/moccasin", + "url": "https://github.com/sbmlteam/moccasin", + "rel": "/software/repository/github/sbmlteam/moccasin", + "avatar": "https://avatars.githubusercontent.com/u/1799692?v=4", + "description": "MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.", + "topics": [ + "matlab", + "sbml", + "conversion", + "python", + "systems-biology", + "differential-equations", + "ode", + "ode-model" + ] + }, + { + "uid": "github/ADThomas-astro/oxaf", + "url": "https://github.com/ADThomas-astro/oxaf", + "rel": "/software/repository/github/ADThomas-astro/oxaf", + "avatar": "https://avatars.githubusercontent.com/u/20833207?v=4", + "description": null, "topics": [] }, { - "uid": "github/kellino/DiscreteEntropy.jl", - "url": "https://github.com/kellino/DiscreteEntropy.jl", - "rel": "/software/repository/github/kellino/DiscreteEntropy.jl", - "avatar": "https://avatars.githubusercontent.com/u/12098944?v=4", - "description": "Estimation of Shannon Entropy for Discrete Random Variables", + "uid": "github/wiki/Install-macs2", + "url": null, + "rel": "/software/repository/github/wiki/Install-macs2", + "avatar": "", + "description": "(Model Based Analysis of ChIP-Seq data) a novel algorithm for identifying transcript factor binding sites.", "topics": [] }, { - "uid": "github/ajohnson-uoregon/llvm-project", - "url": "https://github.com/ajohnson-uoregon/llvm-project", - "rel": "/software/repository/github/ajohnson-uoregon/llvm-project", - "avatar": "https://avatars.githubusercontent.com/u/37465135?v=4", - "description": "The LLVM Project is a collection of modular and reusable compiler and toolchain technologies. Note: the repository does not accept github pull requests at this moment. Please submit your patches at http://reviews.llvm.org.", + "uid": "github/lberaldoesilva/naif", + "url": "https://github.com/lberaldoesilva/naif", + "rel": "/software/repository/github/lberaldoesilva/naif", + "avatar": "https://avatars.githubusercontent.com/u/44235490?v=4", + "description": "pure-python package for numerical analysis of frequencies of numerically integrated orbits", "topics": [] }, { - "uid": "github/zpliulab/GENELink", - "url": "https://github.com/zpliulab/GENELink", - "rel": "/software/repository/github/zpliulab/GENELink", - "avatar": "https://avatars.githubusercontent.com/u/54654413?v=4", - "description": null, + "uid": "github/lberaldoesilva/tropygal", + "url": "https://github.com/lberaldoesilva/tropygal", + "rel": "/software/repository/github/lberaldoesilva/tropygal", + "avatar": "https://avatars.githubusercontent.com/u/44235490?v=4", + "description": "Entropy estimates and distribution functions for galactic dynamics", "topics": [] }, { - "uid": "github/zpliulab/GeoBind", - "url": "https://github.com/zpliulab/GeoBind", - "rel": "/software/repository/github/zpliulab/GeoBind", - "avatar": "https://avatars.githubusercontent.com/u/54654413?v=4", - "description": "Segmentation of nucleic acid binding interface on protein surface with geometric deep learning", + "uid": "github/sethspjohnso/satmc", + "url": "https://github.com/sethspjohnso/satmc", + "rel": "/software/repository/github/sethspjohnso/satmc", + "avatar": "https://avatars.githubusercontent.com/u/5375696?v=4", + "description": "Current versions of IDL and Python based SATMC", "topics": [] }, { - "uid": "github/HofstadterTools/HofstadterTools", - "url": "https://github.com/HofstadterTools/HofstadterTools", - "rel": "/software/repository/github/HofstadterTools/HofstadterTools", - "avatar": "https://avatars.githubusercontent.com/u/146359056?v=4", - "description": "A Python package for analyzing the Hofstadter model.", - "topics": [ - "band-theory", - "condensed-matter-physics", - "electromagnetism", - "fractals", - "mathematical-physics", - "quantum-hall-effect", - "quantum-physics", - "theoretical-physics", - "topological-materials", - "topological-order" - ] + "uid": "github/IBMTRostock/GIFT", + "url": "https://github.com/IBMTRostock/GIFT", + "rel": "/software/repository/github/IBMTRostock/GIFT", + "avatar": "https://avatars.githubusercontent.com/u/93711119?v=4", + "description": "This work comes from the Institute for Biomedical Engineering (https://ibmt.med.uni-rostock.de/en/) at the University Medical Center Rostock", + "topics": [] + }, + { + "uid": "github/Jieyu126/Jitter", + "url": "https://github.com/Jieyu126/Jitter", + "rel": "/software/repository/github/Jieyu126/Jitter", + "avatar": "https://avatars.githubusercontent.com/u/16110010?v=4", + "description": null, + "topics": [] }, { - "uid": "github/KULL-Centre/DEERpredict", - "url": "https://github.com/KULL-Centre/DEERpredict", - "rel": "/software/repository/github/KULL-Centre/DEERpredict", - "avatar": "https://avatars.githubusercontent.com/u/45874707?v=4", - "description": "Software for the prediction of DEER and PRE data from conformational ensembles.", - "topics": [ - "deer", - "epr", - "nmr-spectroscopy", - "molecular-simulation", - "biophysics" - ] + "uid": "github/BioinfoUNIBA/REDItools2", + "url": "https://github.com/BioinfoUNIBA/REDItools2", + "rel": "/software/repository/github/BioinfoUNIBA/REDItools2", + "avatar": "https://avatars.githubusercontent.com/u/50454732?v=4", + "description": null, + "topics": [] }, { - "uid": "github/alexfields/ORF-RATER", - "url": "https://github.com/alexfields/ORF-RATER", - "rel": "/software/repository/github/alexfields/ORF-RATER", - "avatar": "https://avatars.githubusercontent.com/u/5758587?v=4", - "description": "Regression-based annotation of protein-coding sequences from ribosome profiling data", + "uid": "github/zd1/telseq", + "url": "https://github.com/zd1/telseq", + "rel": "/software/repository/github/zd1/telseq", + "avatar": "https://avatars.githubusercontent.com/u/814295?v=4", + "description": "A software for calculating telomere length", "topics": [] }, { - "uid": "github/mncrowe/QGDipoles.jl", - "url": "https://github.com/mncrowe/QGDipoles.jl", - "rel": "/software/repository/github/mncrowe/QGDipoles.jl", - "avatar": "https://avatars.githubusercontent.com/u/87329513?v=4", - "description": "Julia package for creating steady dipolar vortex solutions to the quasi-geostrophic equations", + "uid": "github/CNuge/BOLD-CLI", + "url": "https://github.com/CNuge/BOLD-CLI", + "rel": "/software/repository/github/CNuge/BOLD-CLI", + "avatar": "https://avatars.githubusercontent.com/u/17327173?v=4", + "description": "Command line interface for the retrieval of data from http://www.boldsystems.org", "topics": [] }, { - "uid": "github/JakobRoche/OCSVM-Transit-Detection", - "url": "https://github.com/JakobRoche/OCSVM-Transit-Detection", - "rel": "/software/repository/github/JakobRoche/OCSVM-Transit-Detection", - "avatar": "https://avatars.githubusercontent.com/u/175963631?v=4", - "description": "The source code for a One-Class SVM model designed to detect exoplanet transit events.", + "uid": "github/dfm/photodynam", + "url": "https://github.com/dfm/photodynam", + "rel": "/software/repository/github/dfm/photodynam", + "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", + "description": "Photodynamical code for fitting the light curves of multiple body systems written by Josh Carter", "topics": [] }, { - "uid": "github/octapps/octapps", - "url": "https://github.com/octapps/octapps", - "rel": "/software/repository/github/octapps/octapps", - "avatar": "https://avatars.githubusercontent.com/u/38090409?v=4", - "description": "Library of Octave functions for continuous gravitational-wave data analysis", + "uid": "github/dfm/ketu", + "url": "https://github.com/dfm/ketu", + "rel": "/software/repository/github/dfm/ketu", + "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", + "description": "I can haz planetz?", "topics": [] }, { - "uid": "github/walaj/svaba", - "url": "https://github.com/walaj/svaba", - "rel": "/software/repository/github/walaj/svaba", - "avatar": "https://avatars.githubusercontent.com/u/6922120?v=4", - "description": "Structural variation and indel detection by local assembly", + "uid": "github/dfm/exopop", + "url": "https://github.com/dfm/exopop", + "rel": "/software/repository/github/dfm/exopop", + "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", + "description": "Inferring the population of exoplanets", + "topics": [] + }, + { + "uid": "github/dfm/celerite", + "url": "https://github.com/dfm/celerite", + "rel": "/software/repository/github/dfm/celerite", + "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", + "description": "Scalable 1D Gaussian Processes in C++, Python, and Julia", "topics": [ - "indels", - "variants", - "assembled-contigs", - "structural-variations", + "python", + "gaussian-processes", + "astronomy", + "time-series", + "stars", + "exoplanets", + "julia", + "cpp", "c-plus-plus" ] }, { - "uid": "github/walaj/SeqLib", - "url": "https://github.com/walaj/SeqLib", - "rel": "/software/repository/github/walaj/SeqLib", - "avatar": "https://avatars.githubusercontent.com/u/6922120?v=4", - "description": "C++ htslib/bwa-mem/fermi interface for interrogating sequence data", + "uid": "github/dfm/corner.py", + "url": "https://github.com/dfm/corner.py", + "rel": "/software/repository/github/dfm/corner.py", + "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", + "description": "Make some beautiful corner plots", "topics": [ - "bwa-mem", - "fermi", - "htslib", - "c-plus-plus", - "sequence-alignments" + "python", + "plotting", + "data-analysis", + "data-visualization" ] }, { - "uid": "github/hsinnan75/MapCaller", - "url": "https://github.com/hsinnan75/MapCaller", - "rel": "/software/repository/github/hsinnan75/MapCaller", - "avatar": "https://avatars.githubusercontent.com/u/10265769?v=4", - "description": "MapCaller \u2013 An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes", + "uid": "github/ocean-eddy-cpt/gcm-filters", + "url": "https://github.com/ocean-eddy-cpt/gcm-filters", + "rel": "/software/repository/github/ocean-eddy-cpt/gcm-filters", + "avatar": "https://avatars.githubusercontent.com/u/54479818?v=4", + "description": "Diffusion-based Spatial Filtering of Gridded Data", "topics": [] }, { - "uid": "github/hsinnan75/GSAlign", - "url": "https://github.com/hsinnan75/GSAlign", - "rel": "/software/repository/github/hsinnan75/GSAlign", - "avatar": "https://avatars.githubusercontent.com/u/10265769?v=4", - "description": "GSAlign: an ultra-fast sequence alignment algorithm for intra-species genome comparison", + "uid": "github/samuelmurail/af_analysis", + "url": "https://github.com/samuelmurail/af_analysis", + "rel": "/software/repository/github/samuelmurail/af_analysis", + "avatar": "https://avatars.githubusercontent.com/u/31649605?v=4", + "description": " Analysis of alphafold and colabfold results", "topics": [] }, { - "uid": "github/dmitryduev/penquins", - "url": "https://github.com/dmitryduev/penquins", - "rel": "/software/repository/github/dmitryduev/penquins", - "avatar": "https://avatars.githubusercontent.com/u/7557205?v=4", - "description": "A python client for Kowalski", - "topics": [ - "kowalski", - "python-client", - "ztf", - "ztf-ii" - ] + "uid": "github/quinlanW/dbMisLoc", + "url": "https://github.com/quinlanW/dbMisLoc", + "rel": "/software/repository/github/quinlanW/dbMisLoc", + "avatar": "https://avatars.githubusercontent.com/u/57059991?v=4", + "description": null, + "topics": [] }, { - "uid": "github/leonardlab/COMET", - "url": "https://github.com/leonardlab/COMET", - "rel": "/software/repository/github/leonardlab/COMET", - "avatar": "https://avatars.githubusercontent.com/u/46577112?v=4", - "description": "The COMET toolkit for composing customizable genetic programs in mammalian cells", + "uid": "github/s2mLab/pyScienceMode", + "url": "https://github.com/s2mLab/pyScienceMode", + "rel": "/software/repository/github/s2mLab/pyScienceMode", + "avatar": "https://avatars.githubusercontent.com/u/38570329?v=4", + "description": null, "topics": [] }, { - "uid": "github/Xomics/ACTIONdemonstrator_workflow", - "url": "https://github.com/Xomics/ACTIONdemonstrator_workflow", - "rel": "/software/repository/github/Xomics/ACTIONdemonstrator_workflow", - "avatar": "https://avatars.githubusercontent.com/u/60345209?v=4", - "description": "X-omics ACTION demonstrator multi-omics analysis workflow", + "uid": "github/meantrix/corrp", + "url": "https://github.com/meantrix/corrp", + "rel": "/software/repository/github/meantrix/corrp", + "avatar": "https://avatars.githubusercontent.com/u/49562545?v=4", + "description": "Compute multiple types of correlations analysis (Pearson correlation, R^2 coefficient of linear regression, Cramer's V measure of association, Distance Correlation,The Maximal Information Coefficient, Uncertainty coefficient and Predictive Power Score) in large dataframes with mixed columns classes(integer, numeric, factor and character) in parallel backend.", + "topics": [ + "correlation", + "dataframe", + "compute-correlations", + "mixed-types", + "statistical-tests", + "parallel", + "r", + "clustering-algorithm", + "acca", + "pearson-correlation", + "correlation-matrix", + "correlation-calculations", + "uncertainty-coefficient" + ] + }, + { + "uid": "github/nand1155/CausNet", + "url": "https://github.com/nand1155/CausNet", + "rel": "/software/repository/github/nand1155/CausNet", + "avatar": "https://avatars.githubusercontent.com/u/109425599?v=4", + "description": "Generational orderings based search for optimal Bayesian networks via dynamic programming with parent set constraints", "topics": [] }, { - "uid": "github/daniellefenech/SERPent", - "url": "https://github.com/daniellefenech/SERPent", - "rel": "/software/repository/github/daniellefenech/SERPent", - "avatar": "https://avatars.githubusercontent.com/u/9569819?v=4", - "description": "RFI mitigation software", + "uid": "github/bxskdh/TSTA", + "url": "https://github.com/bxskdh/TSTA", + "rel": "/software/repository/github/bxskdh/TSTA", + "avatar": "https://avatars.githubusercontent.com/u/137745769?v=4", + "description": "pairwise and multiple sequence alignment accelerated by simd and threads", "topics": [] }, { - "uid": "github/symmy596/SurfinPy", - "url": "https://github.com/symmy596/SurfinPy", - "rel": "/software/repository/github/symmy596/SurfinPy", - "avatar": "https://avatars.githubusercontent.com/u/26469895?v=4", - "description": "Thermodynamic Phase Diagram Generator", + "uid": "github/AlgoLab/shark", + "url": "https://github.com/AlgoLab/shark", + "rel": "/software/repository/github/AlgoLab/shark", + "avatar": "https://avatars1.githubusercontent.com/u/449800?v=4", + "description": "Mapping-free filtering of irrelevant RNA-Seq reads", "topics": [ - "density-functional-theory", - "thermodynamic-properties" + "bioinformatics", + "rna-seq", + "alignment-free", + "filtering" ] }, { - "uid": "github/symmy596/Polypy", - "url": "https://github.com/symmy596/Polypy", - "rel": "/software/repository/github/symmy596/Polypy", - "avatar": "https://avatars.githubusercontent.com/u/26469895?v=4", - "description": "polypy - Analysis Tools for Solid State Molecular Dynamics and Monte Carlo Trajectories", + "uid": "github/inab/trimal", + "url": "https://github.com/inab/trimal", + "rel": "/software/repository/github/inab/trimal", + "avatar": "https://avatars.githubusercontent.com/u/3019853?v=4", + "description": "A tool for automated alignment trimming in large-scale phylogenetic analyses. Development version: 2.0", "topics": [ - "monte-carlo-simulation", - "molecular-dynamics-simulation", - "materials-science", - "solid-state-chemistry", - "solid-state-physics", - "simulation", - "chemistry" + "multiple-sequence-alignment", + "trimming", + "bioinformatics-tool" ] }, { - "uid": "github/akdeniz-uzay/A-Track", - "url": "https://github.com/akdeniz-uzay/A-Track", - "rel": "/software/repository/github/akdeniz-uzay/A-Track", - "avatar": "https://avatars.githubusercontent.com/u/10726366?v=4", - "description": "A-Track: Detecting Moving Objects in FITS images.", + "uid": "github/nextgenusfs/amptk", + "url": "https://github.com/nextgenusfs/amptk", + "rel": "/software/repository/github/nextgenusfs/amptk", + "avatar": "https://avatars.githubusercontent.com/u/6164308?v=4", + "description": "AMPtk: Amplicon ToolKit for NGS data (formally UFITS)", "topics": [ - "astronomy", - "asteroids", - "image-processing" + "amplicons", + "microbiome", + "mycobiome", + "next-generation-sequencing", + "fungi", + "rdna", + "coi", + "lsu", + "co1", + "mtco1" ] }, { - "uid": "github/RajLabMSSM/echolocatoR", - "url": "https://github.com/RajLabMSSM/echolocatoR", - "rel": "/software/repository/github/RajLabMSSM/echolocatoR", - "avatar": "https://avatars.githubusercontent.com/u/43655912?v=4", - "description": "Automated statistical and functional fine-mapping pipeline with extensive API access to datasets.", + "uid": "github/nextgenusfs/funannotate", + "url": "https://github.com/nextgenusfs/funannotate", + "rel": "/software/repository/github/nextgenusfs/funannotate", + "avatar": "https://avatars.githubusercontent.com/u/6164308?v=4", + "description": "Eukaryotic Genome Annotation Pipeline", "topics": [ - "bioinformatics", - "finemap", - "colocalization", - "linkage-disequilibrium", - "gwas", - "qtl", - "variant-annotation", - "echoverse" + "genome-annotation", + "gene-models", + "comparative-genomics", + "ncbi-submission" ] }, { - "uid": "github/felipeelorrieta/IAR_Model", - "url": "https://github.com/felipeelorrieta/IAR_Model", - "rel": "/software/repository/github/felipeelorrieta/IAR_Model", - "avatar": "https://avatars.githubusercontent.com/u/41742849?v=4", - "description": "This folder contains R and Python functions to fit unequally spaced time series from the Irregular Autoregressive (IAR). From the functions of this folder we can generate observations for each process, compute the negative of the log likelihood of these process, fit each model to irregularly sampled data, and test the significance of the estimated parameters.", - "topics": [] + "uid": "github/atfrank/PyShifts", + "url": "https://github.com/atfrank/PyShifts", + "rel": "/software/repository/github/atfrank/PyShifts", + "avatar": "https://avatars.githubusercontent.com/u/5891136?v=4", + "description": "Pyshifts: A Pymol Plugin for Chemical Shift-Based Analysis of Biomolecular Ensembles", + "topics": [ + "chemical-shift", + "pymol-plugin", + "pymol", + "error-analysis" + ] }, { - "uid": "github/cl3425/Clairvoyance", - "url": "https://github.com/cl3425/Clairvoyance", - "rel": "/software/repository/github/cl3425/Clairvoyance", - "avatar": "https://avatars.githubusercontent.com/u/16911363?v=4", - "description": "Predicting multiple-planet systems for TESS", - "topics": [] + "uid": "github/reproducible-biomedical-modeling/Biosimulations", + "url": "https://github.com/biosimulations/Biosimulations", + "rel": "/software/repository/github/reproducible-biomedical-modeling/Biosimulations", + "avatar": "https://avatars0.githubusercontent.com/u/53012665?v=4", + "description": "Platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results", + "topics": [ + "biology", + "modeling", + "simulation", + "standards", + "sbml", + "sed-ml", + "vega", + "reproducibility", + "biochemical-networks", + "biosimulations" + ] }, { - "uid": "github/husseinaluie/FlowSieve", - "url": "https://github.com/husseinaluie/FlowSieve", - "rel": "/software/repository/github/husseinaluie/FlowSieve", - "avatar": "https://avatars.githubusercontent.com/u/16828501?v=4", - "description": "FlowSieve coarse-graining code base", + "uid": "github/PaulRitsche/DLTrack", + "url": "https://github.com/PaulRitsche/DL_Track_US", + "rel": "/software/repository/github/PaulRitsche/DLTrack", + "avatar": "https://avatars.githubusercontent.com/u/71383228?v=4", + "description": "This repositories contains code for automatic analysis of human lower limb ultrasonography images.", "topics": [] }, { - "uid": "github/STOmics/cs-benchmark", - "url": "https://github.com/STOmics/cs-benchmark", - "rel": "/software/repository/github/STOmics/cs-benchmark", - "avatar": "https://avatars.githubusercontent.com/u/129851450?v=4", - "description": "This repository is for cell segmentation benchmark", + "uid": "github/YesselmanLab/rna_map", + "url": "https://github.com/YesselmanLab/rna_map", + "rel": "/software/repository/github/YesselmanLab/rna_map", + "avatar": "https://avatars.githubusercontent.com/u/59420481?v=4", + "description": "tools to do mutational profiling (MaP) analysis for RNA chemical mapping experiments.", "topics": [] }, { - "uid": "github/STOmics/EAGS", - "url": "https://github.com/STOmics/EAGS", - "rel": "/software/repository/github/STOmics/EAGS", - "avatar": "https://avatars.githubusercontent.com/u/129851450?v=4", - "description": "EAGS:efficient and adaptive Gaussian smoothing", - "topics": [] + "uid": "github/sebastian-zieba/PACMAN", + "url": "https://github.com/sebastian-zieba/PACMAN", + "rel": "/software/repository/github/sebastian-zieba/PACMAN", + "avatar": "https://avatars.githubusercontent.com/u/44154733?v=4", + "description": "PACMAN is a pipeline to reduce and analyze data collected by Hubble Wide Field Camera 3 (HST/WFC3) using either the G102 or G141 grism.", + "topics": [ + "python", + "exoplanets", + "hst", + "astronomy", + "wfc3" + ] }, { - "uid": "github/iomega/paired-data-form", - "url": "https://github.com/iomega/paired-data-form", - "rel": "/software/repository/github/iomega/paired-data-form", - "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", - "description": "Linking mas spectra and genomic information to discover new chemistry", + "uid": "github/vijayvarma392/binaryBHexp", + "url": "https://github.com/vijayvarma392/binaryBHexp", + "rel": "/software/repository/github/vijayvarma392/binaryBHexp", + "avatar": "https://avatars.githubusercontent.com/u/9355891?v=4", + "description": "The binary Black Hole explorer (visualizations)", "topics": [] }, { - "uid": "github/iomega/spec2vec_gnps_data_analysis", - "url": "https://github.com/iomega/spec2vec_gnps_data_analysis", - "rel": "/software/repository/github/iomega/spec2vec_gnps_data_analysis", - "avatar": "https://avatars.githubusercontent.com/u/39822447?v=4", - "description": "Analysis and benchmarking of mass spectra similarity measures using gnps data set.", - "topics": [] + "uid": "github/baoxingsong/AnchorWave", + "url": "https://github.com/baoxingsong/AnchorWave", + "rel": "/software/repository/github/baoxingsong/AnchorWave", + "avatar": "https://avatars.githubusercontent.com/u/18551962?v=4", + "description": "Sensitive alignment of genomes with high sequence diversity, extensive structural polymorphism and whole-genome duplication variation", + "topics": [ + "genome", + "genome-alignment" + ] }, { - "uid": "github/iomega/spec2vec", - "url": "https://github.com/iomega/spec2vec", - "rel": "/software/repository/github/iomega/spec2vec", - "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", - "description": "Word2Vec based similarity measure of mass spectrometry data.", + "uid": "github/jonas-fuchs/varVAMP", + "url": "https://github.com/jonas-fuchs/varVAMP", + "rel": "/software/repository/github/jonas-fuchs/varVAMP", + "avatar": "https://avatars.githubusercontent.com/u/78491186?v=4", + "description": "Design degenerated primers on highly variable alignments for full genome sequencing or qPCR. Specifically developed for viruses.", "topics": [ - "word2vec", - "mass-spectrometry", - "fuzzy-matching", - "fuzzy-search" + "illumina", + "oxford-nanopore", + "primer", + "primer-design", + "qpcr", + "sanger", + "multiplex-pcr", + "pypi-package", + "virus", + "amplicons", + "ampliconseq", + "sequencing", + "conda", + "consensus-sequences", + "container", + "degenerate-primers", + "easy-to-use", + "pcr", + "python3", + "primer-blast" ] }, { - "uid": "github/iomega/zenodo-upload", - "url": "https://github.com/iomega/zenodo-upload", - "rel": "/software/repository/github/iomega/zenodo-upload", - "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", - "description": "JS package to create a new version of a Zenodo upload with a file", + "uid": "github/UK-Digital-Heart-Project/4Dsegment", + "url": "https://github.com/UK-Digital-Heart-Project/4Dsegment", + "rel": "/software/repository/github/UK-Digital-Heart-Project/4Dsegment", + "avatar": "https://avatars.githubusercontent.com/u/13782814?v=4", + "description": null, "topics": [] }, { - "uid": "github/EcoJulia/SimpleSDMLayers.jl", - "url": "https://github.com/EcoJulia/SimpleSDMLayers.jl", - "rel": "/software/repository/github/EcoJulia/SimpleSDMLayers.jl", - "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", - "description": "Simple layers for species distribution modeling and bioclimatic data", + "uid": "github/UK-Digital-Heart-Project/4Dsurvival", + "url": "https://github.com/UK-Digital-Heart-Project/4Dsurvival", + "rel": "/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", + "avatar": "https://avatars.githubusercontent.com/u/13782814?v=4", + "description": "Deep learning cardiac motion analysis for survival prediction", "topics": [] }, { - "uid": "github/EcoJulia/EcologicalNetworks.jl", - "url": "https://github.com/EcoJulia/EcologicalNetworks.jl", - "rel": "/software/repository/github/EcoJulia/EcologicalNetworks.jl", - "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", - "description": "Everything you've never dreamed about measuring on ecological networks.", + "uid": "github/damcb/tyssue", + "url": "https://github.com/DamCB/tyssue", + "rel": "/software/repository/github/damcb/tyssue", + "avatar": "https://avatars.githubusercontent.com/u/7861101?v=4", + "description": "An epithelium simulation library", "topics": [ - "julia", - "ecology", - "networks" + "vertex", + "pandas", + "biological-simulations", + "geometry", + "notebook" ] }, { - "uid": "github/EcoJulia/Microbiome.jl", - "url": "https://github.com/EcoJulia/Microbiome.jl", - "rel": "/software/repository/github/EcoJulia/Microbiome.jl", - "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", - "description": "For analysis of microbiome and microbial community data", + "uid": "github/kateharborne/SimSpin", + "url": "https://github.com/kateharborne/SimSpin", + "rel": "/software/repository/github/kateharborne/SimSpin", + "avatar": "https://avatars.githubusercontent.com/u/29746421?v=4", + "description": "SimSpin - A package for the kinematic analysis of galaxy simulations", "topics": [ - "microbiome", - "julia-language", - "ecology", - "biology" + "simulation", + "ifs", + "kinematics", + "galaxies" ] }, { - "uid": "github/sundarjhu/2-DUST", - "url": "https://github.com/sundarjhu/2-DUST", - "rel": "/software/repository/github/sundarjhu/2-DUST", - "avatar": "https://avatars.githubusercontent.com/u/15619959?v=4", - "description": "2-DUST is a general-purpose dust radiative transfer code for an axisymmetric system that reveals the global energetics of dust grains in the shell and the 2-D projected morphologies of the shell that are strongly dependent on the mixed effects of the axisymmetric dust distribution and inclination angle. It can be used to model a variety of axisymmetric astronomical dust systems.", - "topics": [] - }, - { - "uid": "github/liniguez/Insplico_simulations", - "url": "https://github.com/liniguez/Insplico_simulations", - "rel": "/software/repository/github/liniguez/Insplico_simulations", - "avatar": "https://avatars.githubusercontent.com/u/36859003?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/JuliaMatrices/LazyBandedMatrices.jl", - "url": "https://github.com/JuliaMatrices/LazyBandedMatrices.jl", - "rel": "/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", - "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", - "description": "A Julia package for lazy banded matrices", - "topics": [] - }, - { - "uid": "github/JuliaMatrices/BlockBandedMatrices.jl", - "url": "https://github.com/JuliaMatrices/BlockBandedMatrices.jl", - "rel": "/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", - "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", - "description": "A Julia package for representing block-banded matrices and banded-block-banded matrices", - "topics": [] + "uid": "github/lcpp-org/RustBCA", + "url": "https://github.com/lcpp-org/RustBCA", + "rel": "/software/repository/github/lcpp-org/RustBCA", + "avatar": "https://avatars.githubusercontent.com/u/37936084?v=4", + "description": "A Binary Collision Approximation (BCA) code for arbitrary ion-material interactions", + "topics": [ + "binary-collision-approximation", + "ion-solid-interactions", + "plasma-material-interactions", + "fusion", + "materials-science", + "sputtering", + "implantation", + "range", + "bca-codes", + "bca", + "incident-ion", + "ion-material-interactions", + "rust", + "binary-collisions", + "nuclear-fusion", + "simulation", + "yamamura", + "bohdansky", + "nuclear-stopping", + "electronic-stopping" + ] }, { - "uid": "github/JuliaMatrices/BandedMatrices.jl", - "url": "https://github.com/JuliaMatrices/BandedMatrices.jl", - "rel": "/software/repository/github/JuliaMatrices/BandedMatrices.jl", - "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", - "description": "A Julia package for representing banded matrices", + "uid": "github/blankhaar/PORTAL", + "url": "https://github.com/blankhaar/PORTAL", + "rel": "/software/repository/github/blankhaar/PORTAL", + "avatar": "https://avatars.githubusercontent.com/u/50137743?v=4", + "description": "POlarized Radiative Transfer Adapted to Lines", "topics": [] }, { - "uid": "github/elkebir-group/derna", - "url": "https://github.com/elkebir-group/derna", - "rel": "/software/repository/github/elkebir-group/derna", - "avatar": "https://avatars.githubusercontent.com/u/37197144?v=4", - "description": "RNA sequence design for a target protein sequence", - "topics": [] + "uid": "github/dfujim/bfit", + "url": "https://github.com/dfujim/bfit", + "rel": "/software/repository/github/dfujim/bfit", + "avatar": "https://avatars.githubusercontent.com/u/7872559?v=4", + "description": "A Python application for the analysis of \u03b2-NMR and \u03b2-NQR data taken at TRIUMF.", + "topics": [ + "b-nmr", + "b-nqr", + "triumf" + ] }, { - "uid": "github/elkebir-group/Jumper", - "url": "https://github.com/elkebir-group/Jumper", - "rel": "/software/repository/github/elkebir-group/Jumper", - "avatar": "https://avatars.githubusercontent.com/u/37197144?v=4", - "description": "Discontinuous Transcript Assembly in Nidovirales", - "topics": [] + "uid": "github/jiwoncpark/baobab", + "url": "https://github.com/jiwoncpark/baobab", + "rel": "/software/repository/github/jiwoncpark/baobab", + "avatar": "https://avatars.githubusercontent.com/u/15166916?v=4", + "description": "Generates the training data for hierarchical inference of strongly-lensed systems with Bayesian neural networks", + "topics": [ + "lenstronomy", + "bayesian-neural-networks", + "hierarchical-bayesian-analysis", + "strong-lensing" + ] }, { - "uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", - "url": "https://github.com/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", - "rel": "/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", - "avatar": "https://avatars.githubusercontent.com/u/52074443?v=4", - "description": null, - "topics": [] + "uid": "github/mnets/pymnet", + "url": "https://github.com/mnets/pymnet", + "rel": "/software/repository/github/mnets/pymnet", + "avatar": "https://avatars.githubusercontent.com/u/167196783?v=4", + "description": "The original library for analyzing multilayer networks.", + "topics": [ + "network-analysis", + "python", + "multilayer-networks" + ] }, { - "uid": "github/felixbosco/KeplerFit", - "url": "https://github.com/felixbosco/KeplerFit", - "rel": "/software/repository/github/felixbosco/KeplerFit", - "avatar": "https://avatars.githubusercontent.com/u/43186689?v=4", - "description": "A small piece of code to fit a Keplerian velocity distribution model to position-velocity data", + "uid": "github/astro-otter/otter", + "url": "https://github.com/astro-otter/otter", + "rel": "/software/repository/github/astro-otter/otter", + "avatar": "https://avatars.githubusercontent.com/u/153562482?v=4", + "description": "Repository for the new TDE Catalog", "topics": [] }, { - "uid": "github/LSARP/ProteomicsQC", - "url": "https://github.com/LSARP/ProteomicsQC", - "rel": "/software/repository/github/LSARP/ProteomicsQC", - "avatar": "https://avatars.githubusercontent.com/u/43147062?v=4", + "uid": "github/sorenwacker/ProteomicsQC", + "url": "https://github.com/sorenwacker/ProteomicsQC", + "rel": "/software/repository/github/sorenwacker/ProteomicsQC", + "avatar": "https://avatars.githubusercontent.com/u/3391614?v=4", "description": "Quality Control Pipeline Server for quantitative Proteomics", "topics": [ "proteomics", - "proteomics-data", - "proteomics-data-analysis", - "quality-control", - "pipelines", - "pipeline-framework", + "pipeline", + "server", + "api", "docker-compose" ] }, { - "uid": "github/HHTpy/HHTpywrapper", - "url": "https://github.com/HHTpy/HHTpywrapper", - "rel": "/software/repository/github/HHTpy/HHTpywrapper", - "avatar": "https://avatars.githubusercontent.com/u/20867883?v=4", - "description": "Python Wrapper for Hilbert\u2013Huang Transform MATLAB Package", - "topics": [] - }, - { - "uid": "github/OxES/k2sc", - "url": "https://github.com/OxES/k2sc", - "rel": "/software/repository/github/OxES/k2sc", - "avatar": "https://avatars.githubusercontent.com/u/2815367?v=4", - "description": "K2 systematics correction using Gaussian processes", + "uid": "github/artefactory/choice-learn", + "url": "https://github.com/artefactory/choice-learn", + "rel": "/software/repository/github/artefactory/choice-learn", + "avatar": "https://avatars.githubusercontent.com/u/86767100?v=4", + "description": "Discrete choice modeling in Python with large datasets & models - Assortment & Pricing Optimization .", "topics": [ - "exoplanets", - "exoplanet-transits", - "kepler", - "k2", - "k2-light-curves", - "astronomy", - "gaussian-processes", - "mast-light-curve" + "assortment", + "choice", + "discrete", + "learning", + "machine", + "ml", + "model", + "supermarket", + "gurobi", + "optimization", + "or-tools", + "pricing", + "tensorflow", + "deep", + "neural-networks", + "conditional-logit-model", + "rum", + "choice-modeling" ] }, { - "uid": "github/WGLab/LongGF", - "url": "https://github.com/WGLab/LongGF", - "rel": "/software/repository/github/WGLab/LongGF", - "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", - "description": "A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing", - "topics": [] - }, - { - "uid": "github/WGLab/InterVar", - "url": "https://github.com/WGLab/InterVar", - "rel": "/software/repository/github/WGLab/InterVar", - "avatar": "https://avatars1.githubusercontent.com/u/5926337?v=4", - "description": "A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline", - "topics": [] - }, - { - "uid": "github/WGLab/PhenoGPT2", - "url": "https://github.com/WGLab/PhenoGPT2", - "rel": "/software/repository/github/WGLab/PhenoGPT2", - "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", - "description": "PhenoGPT2 is an advanced phenotype recognition model, leveraging the robust capabilities of large language models.", - "topics": [] - }, - { - "uid": "github/WGLab/LongReadSum", - "url": "https://github.com/WGLab/LongReadSum", - "rel": "/software/repository/github/WGLab/LongReadSum", - "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", - "description": "LongReadSum supports FASTA, FASTQ, BAM, FAST5, and sequencing_summary.txt file formats for quick generation of QC data in HTML and text format.", - "topics": [] + "uid": "github/abs-tudelft/variant-calling-at-scale", + "url": "https://github.com/abs-tudelft/variant-calling-at-scale", + "rel": "/software/repository/github/abs-tudelft/variant-calling-at-scale", + "avatar": "https://avatars.githubusercontent.com/u/49724060?v=4", + "description": "Scalable and Efficient Variant Calling on Apache Spark cluster", + "topics": [ + "gcp-dataproc-cluster", + "bwa", + "duplicates-removal", + "variant-calling", + "deepvariant", + "minimap2" + ] }, { - "uid": "github/YihePang/DisoFLAG", - "url": "https://github.com/YihePang/DisoFLAG", - "rel": "/software/repository/github/YihePang/DisoFLAG", - "avatar": "https://avatars.githubusercontent.com/u/38775429?v=4", - "description": "Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model", + "uid": "github/creanero/locus", + "url": "https://github.com/creanero/locus", + "rel": "/software/repository/github/creanero/locus", + "avatar": "https://avatars.githubusercontent.com/u/10131613?v=4", + "description": "code and script for Locus Algorithm", "topics": [] }, { - "uid": "github/raghuastro/GRIZZLY", - "url": "https://github.com/raghuastro/GRIZZLY", - "rel": "/software/repository/github/raghuastro/GRIZZLY", - "avatar": "https://avatars.githubusercontent.com/u/25389315?v=4", - "description": null, - "topics": [] + "uid": "github/BioMeCIS-Lab/OpenOmics", + "url": "https://github.com/BioMeCIS-Lab/OpenOmics", + "rel": "/software/repository/github/BioMeCIS-Lab/OpenOmics", + "avatar": "https://avatars.githubusercontent.com/u/55261376?v=4", + "description": "A bioinformatics API and web-app to integrate multi-omics datasets & interface with public databases.", + "topics": [ + "genomics", + "multi-omics", + "data-integration", + "python", + "data-manipulation" + ] }, { - "uid": "github/cbib/decontaminator", - "url": "https://github.com/cbib/decontaminator", - "rel": "/software/repository/github/cbib/decontaminator", - "avatar": "https://avatars.githubusercontent.com/u/4851523?v=4", - "description": "deep learning contamination filtering tool", + "uid": "github/rsnemmen/BCES", + "url": "https://github.com/rsnemmen/BCES", + "rel": "/software/repository/github/rsnemmen/BCES", + "avatar": "https://avatars.githubusercontent.com/u/4562573?v=4", + "description": "Python module for performing linear regression for data with measurement errors and intrinsic scatter", "topics": [ - "deep-learning", - "genomics", - "rnaseq", - "viruses" + "linear-regression", + "python", + "statistics" ] }, { - "uid": "github/Ruiz-HCI-Lab/ggMOB", - "url": "https://github.com/Ruiz-HCI-Lab/ggMOB", - "rel": "/software/repository/github/Ruiz-HCI-Lab/ggMOB", - "avatar": "https://avatars.githubusercontent.com/u/41012125?v=4", + "uid": "github/yiling0210/APIR", + "url": "https://github.com/yiling0210/APIR", + "rel": "/software/repository/github/yiling0210/APIR", + "avatar": "https://avatars.githubusercontent.com/u/7484707?v=4", "description": null, "topics": [] }, { - "uid": "github/oliverphilcox/RascalC", - "url": "https://github.com/oliverphilcox/RascalC", - "rel": "/software/repository/github/oliverphilcox/RascalC", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "RascalC: A Fast Code for Galaxy Covariance Matrix Estimation", + "uid": "github/qiankunzizairen/PanGIA", + "url": "https://github.com/qiankunzizairen/PanGIA", + "rel": "/software/repository/github/qiankunzizairen/PanGIA", + "avatar": "https://avatars.githubusercontent.com/u/207340525?v=4", + "description": null, "topics": [] }, { - "uid": "github/oliverphilcox/OneLoopBispectrum", - "url": "https://github.com/oliverphilcox/OneLoopBispectrum", - "rel": "/software/repository/github/oliverphilcox/OneLoopBispectrum", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "Computation of the one-loop bispectrum of galaxies in redshift space", + "uid": "github/kathrinnp/DarkRayNet", + "url": "https://github.com/kathrinnp/DarkRayNet", + "rel": "/software/repository/github/kathrinnp/DarkRayNet", + "avatar": "https://avatars.githubusercontent.com/u/55040575?v=4", + "description": "Quick cosmic ray antiproton simulations for dark matter annihilation models using neural networks", "topics": [] }, { - "uid": "github/oliverphilcox/PolyBin", - "url": "https://github.com/oliverphilcox/PolyBin", - "rel": "/software/repository/github/oliverphilcox/PolyBin", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "Binned polyspectrum estimation on the full sky, optionally polarized and mask-deconvolved", - "topics": [] + "uid": "github/jonaspleyer/cellular_raza", + "url": "https://github.com/jonaspleyer/cellular_raza", + "rel": "/software/repository/github/jonaspleyer/cellular_raza", + "avatar": "https://avatars.githubusercontent.com/u/59249415?v=4", + "description": "Cellular agent-based modeling from a clean slate", + "topics": [ + "agent-based", + "agent-based-modeling", + "biology", + "cellular", + "rust", + "rust-library", + "simulation" + ] }, { - "uid": "github/oliverphilcox/Spectra-Without-Windows", - "url": "https://github.com/oliverphilcox/Spectra-Without-Windows", - "rel": "/software/repository/github/oliverphilcox/Spectra-Without-Windows", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "Estimators and data for window-free analysis of power spectra and bispectra", + "uid": "github/amusecode/amuse", + "url": "https://github.com/amusecode/amuse", + "rel": "/software/repository/github/amusecode/amuse", + "avatar": "https://avatars1.githubusercontent.com/u/3786289?v=4", + "description": "Astrophysical Multipurpose Software Environment. This is the main repository for AMUSE", "topics": [ - "large-scale-structure", - "bispectrum", - "power-spectrum", - "cosmology", - "parameter-inference", - "boss-dr12" + "astrophysics", + "astronomy", + "simulations", + "python" ] }, { - "uid": "github/oliverphilcox/EffectiveHalos", - "url": "https://github.com/oliverphilcox/EffectiveHalos", - "rel": "/software/repository/github/oliverphilcox/EffectiveHalos", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "A 1% accurate model of the matter power spectrum and cluster counts covariance, accurate to k = 1 h/Mpc.", + "uid": "github/amusecode/TRES", + "url": "https://github.com/amusecode/TRES", + "rel": "/software/repository/github/amusecode/TRES", + "avatar": "https://avatars.githubusercontent.com/u/3786289?v=4", + "description": "TRiple Evolution Simulation package", "topics": [] }, { - "uid": "github/oliverphilcox/Keplers-Goat-Herd", - "url": "https://github.com/oliverphilcox/Keplers-Goat-Herd", - "rel": "/software/repository/github/oliverphilcox/Keplers-Goat-Herd", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "Solving Kepler's equation via contour integration, implemented in C++", - "topics": [] + "uid": "github/E3SM-Project/gdess", + "url": "https://github.com/E3SM-Project/gdess", + "rel": "/software/repository/github/E3SM-Project/gdess", + "avatar": "https://avatars.githubusercontent.com/u/7558558?v=4", + "description": "Tool for evaluating atmospheric carbon dioxide concentrations as simulated by Earth system models", + "topics": [ + "earth-system-model", + "model-diagnostics", + "earth-observation", + "python", + "data-visualization" + ] }, { - "uid": "github/oliverphilcox/PolyBin3D", - "url": "https://github.com/oliverphilcox/PolyBin3D", - "rel": "/software/repository/github/oliverphilcox/PolyBin3D", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "Binned polyspectrum estimation for 3D large-scale structure, optionally mask-deconvolved ", + "uid": "github/dixonlab/hic_breakfinder", + "url": "https://github.com/dixonlab/hic_breakfinder", + "rel": "/software/repository/github/dixonlab/hic_breakfinder", + "avatar": "https://avatars.githubusercontent.com/u/31485027?v=4", + "description": "a framework that integrates optical mapping, high-throughput chromosome conformation capture (Hi-C), and whole genome sequencing to systematically detect SVs in a variety of normal or cancer samples and cell lines.", "topics": [] }, { - "uid": "github/oliverphilcox/HIPSTER", - "url": "https://github.com/oliverphilcox/HIPSTER", - "rel": "/software/repository/github/oliverphilcox/HIPSTER", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "HIPSTER: HIgh-k Power SpecTrum and bispectrum EstimatoR", + "uid": "github/xpsi-group/neost", + "url": "https://github.com/xpsi-group/neost", + "rel": "/software/repository/github/xpsi-group/neost", + "avatar": "https://avatars.githubusercontent.com/u/87758280?v=4", + "description": null, "topics": [] }, { - "uid": "github/oliverphilcox/HADES", - "url": "https://github.com/oliverphilcox/HADES", - "rel": "/software/repository/github/oliverphilcox/HADES", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "A Hexadecapolar Analysis for Dust Estimation in Simulations (of CMB B-mode thermal dust emission)", - "topics": [] + "uid": "github/xpsi-group/xpsi", + "url": "https://github.com/xpsi-group/xpsi", + "rel": "/software/repository/github/xpsi-group/xpsi", + "avatar": "https://avatars.githubusercontent.com/u/87758280?v=4", + "description": "X-PSI: X-ray Pulse Simulation and Inference", + "topics": [ + "astrophysics", + "astronomy", + "astronomical-algorithms", + "astrophysical-simulation", + "sampling", + "parameter-estimation", + "statistics-modeling", + "modeling", + "likelihood-functions", + "posterior-sampling", + "x-ray-astronomy" + ] }, { - "uid": "github/oliverphilcox/encore", - "url": "https://github.com/oliverphilcox/encore", - "rel": "/software/repository/github/oliverphilcox/encore", - "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", - "description": "encore: Efficient isotropic 2-, 3-, 4-, 5- and 6-point correlation functions in C++ and CUDA", + "uid": "github/meerklass/MeerFish", + "url": "https://github.com/meerklass/MeerFish", + "rel": "/software/repository/github/meerklass/MeerFish", + "avatar": "https://avatars.githubusercontent.com/u/48520445?v=4", + "description": null, "topics": [] }, { - "uid": "github/carlodev/SegregatedVMSSolver.jl", - "url": "https://github.com/carlodev/SegregatedVMSSolver.jl", - "rel": "/software/repository/github/carlodev/SegregatedVMSSolver.jl", - "avatar": "https://avatars.githubusercontent.com/u/100294007?v=4", - "description": null, - "topics": [] + "uid": "github/BioMedIA/MIRTK", + "url": "https://github.com/BioMedIA/MIRTK", + "rel": "/software/repository/github/BioMedIA/MIRTK", + "avatar": "https://avatars.githubusercontent.com/u/7911500?v=4", + "description": "The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at", + "topics": [ + "image-processing", + "image-registration", + "medical-imaging", + "toolkit", + "free-form-deformation", + "ffd" + ] }, { - "uid": "github/carlodev/SyntheticEddyMethod.jl", - "url": "https://github.com/carlodev/SyntheticEddyMethod.jl", - "rel": "/software/repository/github/carlodev/SyntheticEddyMethod.jl", - "avatar": "https://avatars.githubusercontent.com/u/100294007?v=4", - "description": null, + "uid": "github/eliotayache/GAMMA", + "url": "https://github.com/eliotayache/GAMMA", + "rel": "/software/repository/github/eliotayache/GAMMA", + "avatar": "https://avatars.githubusercontent.com/u/28777824?v=4", + "description": "Relativistic hydro and local cooling on a moving mesh", "topics": [] }, { - "uid": "github/bwengals/CCSNMultivar", - "url": "https://github.com/bwengals/ccsnmultivar", - "rel": "/software/repository/github/bwengals/CCSNMultivar", - "avatar": "https://avatars.githubusercontent.com/u/6325473?v=4", - "description": null, + "uid": "github/jcombs1/blasr", + "url": "https://github.com/jcombs1/blasr", + "rel": "/software/repository/github/jcombs1/blasr", + "avatar": "https://avatars.githubusercontent.com/u/3442275?v=4", + "description": "BLASR: The PacBio\u00ae long read aligner", "topics": [] }, { - "uid": "github/LinkedEarth/pylipd", - "url": "https://github.com/LinkedEarth/pylipd", - "rel": "/software/repository/github/LinkedEarth/pylipd", - "avatar": "https://avatars.githubusercontent.com/u/17730148?v=4", - "description": "PyLiPD: Creating, editing, and manipulating LiPD-formatted datasets in Python", + "uid": "github/iric-soft/km", + "url": "https://github.com/iric-soft/km", + "rel": "/software/repository/github/iric-soft/km", + "avatar": "https://avatars.githubusercontent.com/u/26148135?v=4", + "description": "km : a software for RNA-seq investigation using k-mer decomposition", "topics": [] }, { - "uid": "github/EvolBioInf/phylonium", - "url": "https://github.com/EvolBioInf/phylonium", - "rel": "/software/repository/github/EvolBioInf/phylonium", - "avatar": "https://avatars.githubusercontent.com/u/7930865?v=4", - "description": "\u2665 Fast and Accurate Estimation of Evolutionary Distances", - "topics": [ - "bioinformatics", - "alignment-free", - "phylogenetics" - ] + "uid": "github/rhenanbartels/hrv", + "url": "https://github.com/rhenanbartels/hrv", + "rel": "/software/repository/github/rhenanbartels/hrv", + "avatar": "https://avatars3.githubusercontent.com/u/2186646?v=4", + "description": "A Python package for heart rate variability analysis", + "topics": [] }, { - "uid": "github/EvolBioInf/andi", - "url": "https://github.com/EvolBioInf/andi", - "rel": "/software/repository/github/EvolBioInf/andi", - "avatar": "https://avatars.githubusercontent.com/u/7930865?v=4", - "description": "\u2665 Efficient Estimation of Evolutionary Distances", + "uid": "github/Juke34/AliNe", + "url": "https://github.com/Juke34/AliNe", + "rel": "/software/repository/github/Juke34/AliNe", + "avatar": "https://avatars.githubusercontent.com/u/6769395?v=4", + "description": "Nextflow Alignment Pipeline - from fastq.gz to sorted bam with ease", "topics": [ - "bioinformatics", - "alignment-free" + "bowtie2", + "bwa", + "hisat2", + "minimap2", + "nextflow", + "nucmer", + "star", + "graphmap2", + "bbmap", + "bowtie", + "kallisto", + "ngmlr", + "novoalign", + "subread", + "bwa-sw", + "sublong", + "bmw-mem2", + "salmon", + "starlong", + "last" ] }, { - "uid": "github/combine-lab/salmon", - "url": "https://github.com/COMBINE-lab/salmon", - "rel": "/software/repository/github/combine-lab/salmon", - "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", - "description": "\ud83d\udc1f \ud83c\udf63 \ud83c\udf71 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment", + "uid": "github/gerlero/foamlib", + "url": "https://github.com/gerlero/foamlib", + "rel": "/software/repository/github/gerlero/foamlib", + "avatar": "https://avatars.githubusercontent.com/u/15150530?v=4", + "description": "A modern Python package for interacting with OpenFOAM", "topics": [ - "quasi-mapping", - "bioinformatics", - "rna-seq", - "rnaseq", - "salmon", - "quantification", - "sailfish", - "c-plus-plus", - "gene-expression", - "scrna-seq", - "single-cell", - "10x", - "selective-alignment", - "rna-seq-quantification", - "single-cell-rna-seq", - "transcriptome" + "asyncio", + "openfoam", + "parsing", + "python", + "cases", + "dictionaries", + "fields", + "files", + "slurm" ] }, { - "uid": "github/tomlouden/spiderman", - "url": "https://github.com/tomlouden/SPIDERMAN", - "rel": "/software/repository/github/tomlouden/spiderman", - "avatar": "https://avatars.githubusercontent.com/u/6517539?v=4", - "description": "A fast code to simulate secondary transits and phase curves", + "uid": "github/leigh2/cetra", + "url": "https://github.com/leigh2/cetra", + "rel": "/software/repository/github/leigh2/cetra", + "avatar": "https://avatars.githubusercontent.com/u/7989763?v=4", + "description": "Cambridge Exoplanet Transit Recovery Algorithm", "topics": [] }, { - "uid": "github/madupite/madupite", - "url": "https://github.com/madupite/madupite", - "rel": "/software/repository/github/madupite/madupite", - "avatar": "https://avatars.githubusercontent.com/u/179175157?v=4", - "description": "a High-Performance Distributed Solver for Large-Scale Markov Decision Processes (MDP) relying on Inexact Policy Iteration; for Python and C++", + "uid": "github/astroml/gatspy", + "url": "https://github.com/astroML/gatspy", + "rel": "/software/repository/github/astroml/gatspy", + "avatar": "https://avatars.githubusercontent.com/u/1971246?v=4", + "description": "General tools for Astronomical Time Series in Python", + "topics": [] + }, + { + "uid": "github/enveda/RPath", + "url": "https://github.com/enveda/RPath", + "rel": "/software/repository/github/enveda/RPath", + "avatar": "https://avatars.githubusercontent.com/u/57016420?v=4", + "description": "Source code and data for \"Causal reasoning over knowledge graphs leveraging drug-perturbed and disease-specific transcriptomic signatures for drug discovery\"", "topics": [ - "dynamic-programming", - "high-performance-computing", - "markov-decision-processes", - "mdp", - "mpi", - "nanobind", - "optimal-control", - "petsc", - "stochastic-optimization", - "ethz", - "policy-iteration", - "optimization", - "solver", - "stochastic-optimal-control", - "cpp", - "python", - "python3", - "mdpsolver" + "knowledge-graph", + "causal-networks", + "drug-discovery", + "mechanism-of-action", + "transcriptomics", + "network-biology" ] }, { - "uid": "github/nell-byler/cloudyfsps", - "url": "https://github.com/nell-byler/cloudyfsps", - "rel": "/software/repository/github/nell-byler/cloudyfsps", - "avatar": "https://avatars.githubusercontent.com/u/2601325?v=4", - "description": "Python interface between FSPS and Cloudy.", + "uid": "github/cullanhowlett/l-picola", + "url": "https://github.com/CullanHowlett/l-picola", + "rel": "/software/repository/github/cullanhowlett/l-picola", + "avatar": "https://avatars.githubusercontent.com/u/5528370?v=4", + "description": "A public repository for the code L-PICOLA", "topics": [] }, { - "uid": "github/donaldRwilliams/GGMnonreg", - "url": "https://github.com/donaldRwilliams/GGMnonreg", - "rel": "/software/repository/github/donaldRwilliams/GGMnonreg", - "avatar": "https://avatars.githubusercontent.com/u/19657194?v=4", - "description": null, + "uid": "github/MartianColonist/Cthulhu", + "url": "https://github.com/MartianColonist/Cthulhu", + "rel": "/software/repository/github/MartianColonist/Cthulhu", + "avatar": "https://avatars.githubusercontent.com/u/22718554?v=4", + "description": "A Python package to calculate cross sections for substellar atmospheres", "topics": [] }, { - "uid": "github/donaldRwilliams/BGGM", - "url": "https://github.com/donaldRwilliams/BGGM", - "rel": "/software/repository/github/donaldRwilliams/BGGM", - "avatar": "https://avatars3.githubusercontent.com/u/19657194?v=4", - "description": "Bayesian Gaussian Graphical Models", - "topics": [ - "gaussian-graphical-models", - "bayes-factors", - "bayesian-hypothesis-testing" - ] + "uid": "github/MartianColonist/POSEIDON", + "url": "https://github.com/MartianColonist/POSEIDON", + "rel": "/software/repository/github/MartianColonist/POSEIDON", + "avatar": "https://avatars.githubusercontent.com/u/22718554?v=4", + "description": "Multidimensional atmospheric retrieval of exoplanet spectra.", + "topics": [] }, { - "uid": "github/meantrix/corrp", - "url": "https://github.com/meantrix/corrp", - "rel": "/software/repository/github/meantrix/corrp", - "avatar": "https://avatars.githubusercontent.com/u/49562545?v=4", - "description": "Compute multiple types of correlations analysis (Pearson correlation, R^2 coefficient of linear regression, Cramer's V measure of association, Distance Correlation,The Maximal Information Coefficient, Uncertainty coefficient and Predictive Power Score) in large dataframes with mixed columns classes(integer, numeric, factor and character) in parallel backend.", + "uid": "github/GermanHeim/globalsearch-rs", + "url": "https://github.com/GermanHeim/globalsearch-rs", + "rel": "/software/repository/github/GermanHeim/globalsearch-rs", + "avatar": "https://avatars.githubusercontent.com/u/77305706?v=4", + "description": "A multistart framework for global optimization with scatter search and local NLP solvers written in Rust", "topics": [ - "correlation", - "dataframe", - "compute-correlations", - "mixed-types", - "statistical-tests", - "parallel", - "r", - "clustering-algorithm", - "acca", - "pearson-correlation", - "correlation-matrix", - "correlation-calculations", - "uncertainty-coefficient" + "math", + "optimization", + "optimization-algorithms", + "rust", + "scatter-search", + "numerical-optimization" ] }, { - "uid": "github/silkemaes/MACE", - "url": "https://github.com/silkemaes/MACE", - "rel": "/software/repository/github/silkemaes/MACE", - "avatar": "https://avatars.githubusercontent.com/u/25978534?v=4", - "description": "MACE, a Machine-learning Approach to Chemistry Emulation", + "uid": "github/arjunsavel/cortecs", + "url": "https://github.com/arjunsavel/cortecs", + "rel": "/software/repository/github/arjunsavel/cortecs", + "avatar": "https://avatars.githubusercontent.com/u/35353555?v=4", + "description": "Compressed representations of opacity for radiative transfer!", "topics": [ - "astrochemistry", - "autoencoder", - "machine-learning", - "astrophysics", - "simulation" + "astronomy", + "atmospheres", + "exoplanets", + "radiative-transfer" ] }, { - "uid": "github/fcs-analysis/PyScanFCS", - "url": "https://github.com/FCS-analysis/PyScanFCS", - "rel": "/software/repository/github/fcs-analysis/PyScanFCS", - "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", - "description": "data evaluation in perpendicular line scanning FCS", - "topics": [] - }, - { - "uid": "github/fcs-analysis/PyCorrFit", - "url": "https://github.com/FCS-analysis/PyCorrFit", - "rel": "/software/repository/github/fcs-analysis/PyCorrFit", - "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", - "description": "data analysis and fitting software for fluorescence correlation spectroscopy (FCS)", - "topics": [] - }, - { - "uid": "github/SJaffa/Jplots", - "url": "https://github.com/SJaffa/Jplots", - "rel": "/software/repository/github/SJaffa/Jplots", - "avatar": "https://avatars.githubusercontent.com/u/13678317?v=4", - "description": "Astrophysical data analysis tool: quantifying the shape of pixelated structures using moments", + "uid": "github/arjunsavel/SImMER", + "url": "https://github.com/arjunsavel/SImMER", + "rel": "/software/repository/github/arjunsavel/SImMER", + "avatar": "https://avatars.githubusercontent.com/u/35353555?v=4", + "description": "An open-source & modular reduction pipeline for astronomical images of point sources.", "topics": [ "astronomy", "astrophysics", - "structure", - "dendrogram", - "molecular-clouds", - "filaments" + "python", + "astronomical-images", + "stars" ] }, { - "uid": "github/hillerlab/GenomeAlignmentTools", - "url": "https://github.com/hillerlab/GenomeAlignmentTools", - "rel": "/software/repository/github/hillerlab/GenomeAlignmentTools", - "avatar": "https://avatars0.githubusercontent.com/u/8512188?v=4", - "description": "Tools for improving the sensitivity and specificity of genome alignments", - "topics": [] - }, - { - "uid": "github/ropensci-org/roblog", - "url": "https://github.com/ropensci-org/roblog", - "rel": "/software/repository/github/ropensci-org/roblog", - "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", - "description": "rOpenSci's blog guidance", + "uid": "github/Yida-Lin/libxdf", + "url": "https://github.com/xdf-modules/libxdf", + "rel": "/software/repository/github/Yida-Lin/libxdf", + "avatar": "https://avatars.githubusercontent.com/u/49031462?v=4", + "description": "C++ library for loading XDF files", "topics": [ - "r", - "r-package", - "rstats", - "scalereprod" + "xdf", + "sigviewer" ] }, { - "uid": "github/ropensci-org/pkgreviewr", - "url": "https://github.com/ropensci-org/pkgreviewr", - "rel": "/software/repository/github/ropensci-org/pkgreviewr", - "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", - "description": "R package to facilitate rOpenSci package reviews.", + "uid": "github/wjakethompson/measr", + "url": "https://github.com/wjakethompson/measr", + "rel": "/software/repository/github/wjakethompson/measr", + "avatar": "https://avatars.githubusercontent.com/u/6980750?v=4", + "description": "R package for the Bayesian estimation of diagnostic classification models using Stan", "topics": [ - "unconf18", + "bayesian", + "cdm", + "cmdstanr", + "cognitive-diagnostic-models", + "dcm", "r", "r-package", + "rstan", "rstats", - "review", - "ropensci-reviews", - "ropensci", - "unconf", - "review", - "ropensci", - "ropensci-reviews", - "unconf", - "unconf18", - "scalereprod" + "stan", + "diagnostic-classification-models", + "cognitive-diagnosis", + "psychometrics" ] }, { - "uid": "github/ropensci-org/rotemplate", - "url": "https://github.com/ropensci-org/rotemplate", - "rel": "/software/repository/github/ropensci-org/rotemplate", - "avatar": "https://avatars.githubusercontent.com/u/55517264?v=4", - "description": "pkgdown template for rOpenSci packages :nail_care: :sparkles:", - "topics": [ - "pkgdown", - "r", - "r-package", - "rstats", - "pkgdown" - ] + "uid": "github/kylemede/ExoSOFT", + "url": "https://github.com/kylemede/ExoSOFT", + "rel": "/software/repository/github/kylemede/ExoSOFT", + "avatar": "https://avatars.githubusercontent.com/u/5855140?v=4", + "description": "The Exoplanet Simple Orbit Fitting Toolbox (ExoSOFT). Solves for the orbital elements of any single companion, provided observed radial velocity and/or astrometry.", + "topics": [] }, { - "uid": "github/trinotate/trinotatehub.io", - "url": null, - "rel": "/software/repository/github/trinotate/trinotatehub.io", - "avatar": "", - "description": "a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms.", + "uid": "github/lllangWV/ParquetDB", + "url": "https://github.com/lllangWV/ParquetDB", + "rel": "/software/repository/github/lllangWV/ParquetDB", + "avatar": "https://avatars.githubusercontent.com/u/120115419?v=4", + "description": null, "topics": [] }, { - "uid": "github/atzberg/mlmod", - "url": "https://github.com/atzberg/mlmod", - "rel": "/software/repository/github/atzberg/mlmod", - "avatar": "https://avatars.githubusercontent.com/u/8550758?v=4", - "description": "Machine learning package for data-driven modeling and simulation in LAMMPs.", - "topics": [ - "data-science", - "machine-learning", - "scientific-computation", - "simulations" - ] + "uid": "github/Aravind-Sundararajan/MocoExtendProblem", + "url": "https://github.com/Aravind-Sundararajan/MocoExtendProblem", + "rel": "/software/repository/github/Aravind-Sundararajan/MocoExtendProblem", + "avatar": "https://avatars.githubusercontent.com/u/26929285?v=4", + "description": "this is an example of how to add custom Moco goals to existing matlab scripts instead of constructing an omoco file or porting your existing matlab code to c++", + "topics": [] }, { - "uid": "github/kyleaoman/martini", - "url": "https://github.com/kyleaoman/martini", - "rel": "/software/repository/github/kyleaoman/martini", - "avatar": "https://avatars.githubusercontent.com/u/32932511?v=4", - "description": "Mock spatially resolved spectral line observations of simulated galaxies. Documentation:", + "uid": "github/cython/cython", + "url": "https://github.com/cython/cython", + "rel": "/software/repository/github/cython/cython", + "avatar": "https://avatars3.githubusercontent.com/u/486082?v=4", + "description": "The most widely used Python to C compiler", "topics": [ - "astrophysics", - "radio-astronomy" + "python", + "cython", + "cpython", + "cpython-extensions", + "c", + "cpp", + "performance", + "big-data" ] }, { - "uid": "github/EGaraldi/corecon", - "url": "https://github.com/EGaraldi/corecon", - "rel": "/software/repository/github/EGaraldi/corecon", - "avatar": "https://avatars.githubusercontent.com/u/13069963?v=4", - "description": "User-friendly collection of Reionization-related constraints", + "uid": "github/AstroVPK/kali", + "url": "https://github.com/AstroVPK/kali", + "rel": "/software/repository/github/AstroVPK/kali", + "avatar": "https://avatars.githubusercontent.com/u/11365671?v=4", + "description": "A library to model a time series as a Continuous-time ARMA process", "topics": [] }, { - "uid": "github/EGaraldi/ZInCo", - "url": "https://github.com/EGaraldi/ZInCo", - "rel": "/software/repository/github/EGaraldi/ZInCo", - "avatar": "https://avatars.githubusercontent.com/u/13069963?v=4", - "description": "The ZInCo code for manipulating GADGET initial conditions", - "topics": [] + "uid": "github/Effective-Quadratures/Effective-Quadratures", + "url": "https://github.com/Effective-Quadratures/Effective-Quadratures", + "rel": "/software/repository/github/Effective-Quadratures/Effective-Quadratures", + "avatar": "https://avatars3.githubusercontent.com/u/20475765?v=4", + "description": null, + "topics": [ + "polynomials", + "quadratures", + "least-squares", + "interpolation", + "approximation", + "effective-quadratures", + "python", + "matrix-factorization" + ] }, { - "uid": "github/mdsufz/MuDoGeR", - "url": "https://github.com/mdsufz/MuDoGeR", - "rel": "/software/repository/github/mdsufz/MuDoGeR", - "avatar": "https://avatars.githubusercontent.com/u/53437593?v=4", - "description": "MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.", + "uid": "github/nanograv/PINT", + "url": "https://github.com/nanograv/PINT", + "rel": "/software/repository/github/nanograv/PINT", + "avatar": "https://avatars.githubusercontent.com/u/1416848?v=4", + "description": "PINT is not TEMPO3 -- Software for high-precision pulsar timing", "topics": [] }, { - "uid": "github/fizban007/Aperture4", - "url": "https://github.com/fizban007/Aperture4", - "rel": "/software/repository/github/fizban007/Aperture4", - "avatar": "https://avatars.githubusercontent.com/u/4934996?v=4", - "description": null, + "uid": "github/nanograv/enterprise", + "url": "https://github.com/nanograv/enterprise", + "rel": "/software/repository/github/nanograv/enterprise", + "avatar": "https://avatars.githubusercontent.com/u/1416848?v=4", + "description": "ENTERPRISE (Enhanced Numerical Toolbox Enabling a Robust PulsaR Inference SuitE) is a pulsar timing analysis code, aimed at noise analysis, gravitational-wave searches, and timing model analysis.", "topics": [] }, { - "uid": "github/dblaschke-LANL/PyDislocDyn", - "url": "https://github.com/dblaschke-LANL/PyDislocDyn", - "rel": "/software/repository/github/dblaschke-LANL/PyDislocDyn", - "avatar": "https://avatars.githubusercontent.com/u/40176390?v=4", - "description": null, + "uid": "github/HengyueZ/astrofix", + "url": "https://github.com/HengyueZ/astrofix", + "rel": "/software/repository/github/HengyueZ/astrofix", + "avatar": "https://avatars.githubusercontent.com/u/67264128?v=4", + "description": "Correcting Astronomical Bad Pixels in Python", "topics": [] }, { - "uid": "github/ronnyerrmann/HiFLEx", - "url": "https://github.com/ronnyerrmann/HiFLEx", - "rel": "/software/repository/github/ronnyerrmann/HiFLEx", - "avatar": "https://avatars.githubusercontent.com/u/36272471?v=4", - "description": "Pipeline to reduce echelle data (taken with a single or bifurcated fiber input)", + "uid": "github/complextissue/pytximport", + "url": "https://github.com/complextissue/pytximport", + "rel": "/software/repository/github/complextissue/pytximport", + "avatar": "https://avatars.githubusercontent.com/u/124284698?v=4", + "description": "Feature-rich Python implementation of the tximport package for gene count estimation.", "topics": [ - "data-reduction", - "echelle", - "spectroscopy", "python", - "wavelength-solution", - "serval", - "ceres", - "terra" + "rna", + "rna-seq", + "scverse", + "tximport", + "bioinformatics", + "deseq2", + "anndata" ] }, { - "uid": "github/Kaixhin/Autoencoders", - "url": "https://github.com/Kaixhin/Autoencoders", - "rel": "/software/repository/github/Kaixhin/Autoencoders", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Torch implementations of various types of autoencoders", - "topics": [ - "autoencoder", - "deep-learning" - ] + "uid": "github/gilestrolab/ethoscope", + "url": "https://github.com/gilestrolab/ethoscope", + "rel": "/software/repository/github/gilestrolab/ethoscope", + "avatar": "https://avatars.githubusercontent.com/u/5263770?v=4", + "description": "a platform from monitoring animal behaviour in real time from a raspberry pi", + "topics": [] }, { - "uid": "github/Kaixhin/spinning-up-basic", - "url": "https://github.com/Kaixhin/spinning-up-basic", - "rel": "/software/repository/github/Kaixhin/spinning-up-basic", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Basic versions of agents from Spinning Up in Deep RL written in PyTorch", - "topics": [ - "deep-learning", - "deep-reinforcement-learning" - ] + "uid": "github/gilestrolab/pySolo", + "url": "https://github.com/gilestrolab/pySolo", + "rel": "/software/repository/github/gilestrolab/pySolo", + "avatar": "https://avatars.githubusercontent.com/u/5263770?v=4", + "description": "A software for sleep analysis in Drosophila", + "topics": [] }, { - "uid": "github/Kaixhin/dockerfiles", - "url": "https://github.com/Kaixhin/dockerfiles", - "rel": "/software/repository/github/Kaixhin/dockerfiles", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Compilation of Dockerfiles with automated builds enabled on the Docker Registry", + "uid": "github/xragua/xraybinaryorbit", + "url": "https://github.com/xragua/xraybinaryorbit", + "rel": "/software/repository/github/xragua/xraybinaryorbit", + "avatar": "https://avatars.githubusercontent.com/u/152065965?v=4", + "description": " A Python Package for Analyzing Orbital Modulations in X-ray Binaries", "topics": [ - "docker", - "dockerfiles", - "machine-learning", - "cuda", - "vnc", - "deep-learning" + "orbital-mechanics", + "x-ray-binaries", + "astrophysics" ] }, { - "uid": "github/Kaixhin/FGLab", - "url": "https://github.com/Kaixhin/FGLab", - "rel": "/software/repository/github/Kaixhin/FGLab", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Future Gadget Laboratory", - "topics": [ - "machine-learning", - "reproducible-research", - "reproducible-science" - ] + "uid": "github/fluhus/blini", + "url": "https://github.com/fluhus/blini", + "rel": "/software/repository/github/fluhus/blini", + "avatar": "https://avatars.githubusercontent.com/u/5978130?v=4", + "description": "Lightweight nucleotide sequence search and dereplication.", + "topics": [] }, { - "uid": "github/Kaixhin/Atari", - "url": "https://github.com/Kaixhin/Atari", - "rel": "/software/repository/github/Kaixhin/Atari", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Persistent advantage learning dueling double DQN for the Arcade Learning Environment", - "topics": [ - "deep-reinforcement-learning", - "deep-learning" - ] + "uid": "github/BoPeng/simuPOP", + "url": "https://github.com/BoPeng/simuPOP", + "rel": "/software/repository/github/BoPeng/simuPOP", + "avatar": "https://avatars.githubusercontent.com/u/9889312?v=4", + "description": "A general-purpose forward-time population genetics simulation environment.", + "topics": [] }, { - "uid": "github/Kaixhin/Rainbow", - "url": "https://github.com/Kaixhin/Rainbow", - "rel": "/software/repository/github/Kaixhin/Rainbow", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Rainbow: Combining Improvements in Deep Reinforcement Learning", - "topics": [ - "deep-learning", - "deep-reinforcement-learning" - ] + "uid": "github/PyTables/PyTables", + "url": "https://github.com/PyTables/PyTables", + "rel": "/software/repository/github/PyTables/PyTables", + "avatar": "https://avatars1.githubusercontent.com/u/828302?v=4", + "description": "A Python package to manage extremely large amounts of data", + "topics": [] }, { - "uid": "github/Kaixhin/FGMachine", - "url": "https://github.com/Kaixhin/FGMachine", - "rel": "/software/repository/github/Kaixhin/FGMachine", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Future Gadget Machine", - "topics": [ - "machine-learning", - "reproducible-research", - "reproducible-science" - ] + "uid": "github/AndresRTejedor/Mold", + "url": "https://github.com/AndresRTejedor/Mold", + "rel": "/software/repository/github/AndresRTejedor/Mold", + "avatar": "https://avatars.githubusercontent.com/u/62102050?v=4", + "description": "Lammps package including square-like well potential to implement Mold integration and Lattice mold techniques", + "topics": [] }, { - "uid": "github/Kaixhin/PlaNet", - "url": "https://github.com/Kaixhin/PlaNet", - "rel": "/software/repository/github/Kaixhin/PlaNet", - "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", - "description": "Deep Planning Network: Control from pixels by latent planning with learned dynamics", + "uid": "github/silburt/DeepMoon", + "url": "https://github.com/silburt/DeepMoon", + "rel": "/software/repository/github/silburt/DeepMoon", + "avatar": "https://avatars.githubusercontent.com/u/9949184?v=4", + "description": "Convolutional neural network code for extracting Lunar craters from Digital Elevation Maps (DEMs).", "topics": [ + "convnet", + "tensorflow", + "moon", + "astrophysics", + "keras", + "python", "deep-learning", - "deep-reinforcement-learning" + "machine-learning" ] }, { - "uid": "github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", - "url": "https://github.com/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", - "rel": "/software/repository/github/Pediatric-Accelerated-Intelligence-Lab/HOPE-Segmenter-Kids", - "avatar": "https://avatars.githubusercontent.com/u/108754960?v=4", - "description": "CNH Pediatric Brain Tumor Segmenter", + "uid": "github/imr-framework/OCTOPUS", + "url": "https://github.com/imr-framework/OCTOPUS", + "rel": "/software/repository/github/imr-framework/OCTOPUS", + "avatar": "https://avatars.githubusercontent.com/u/37110500?v=4", + "description": "Off-resonance Correction OPen soUrce Software", + "topics": [] + }, + { + "uid": "github/dgarrimar/sqtlseeker2-nf", + "url": "https://github.com/dgarrimar/sqtlseeker2-nf", + "rel": "/software/repository/github/dgarrimar/sqtlseeker2-nf", + "avatar": "https://avatars2.githubusercontent.com/u/22029639?v=4", + "description": "An automated sQTL mapping pipeline using Nextflow", "topics": [] }, { - "uid": "github/gem-pasteur/Integron_Finder", - "url": "https://github.com/gem-pasteur/Integron_Finder", - "rel": "/software/repository/github/gem-pasteur/Integron_Finder", - "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", - "description": "Bioinformatics tool to find integrons in bacterial genomes", + "uid": "github/hyosubkim/bayes-toolbox", + "url": "https://github.com/hyosubkim/bayes-toolbox", + "rel": "/software/repository/github/hyosubkim/bayes-toolbox", + "avatar": "https://avatars.githubusercontent.com/u/32351455?v=4", + "description": "bayes-toolbox", "topics": [ - "bioinformatics", - "bacterial-genomes", - "identification" + "bayesian-inference", + "bayesian-statistics", + "kruschke", + "probabilistic-programming", + "python", + "statistics" ] }, { - "uid": "github/gem-pasteur/macsylib", - "url": "https://github.com/gem-pasteur/macsylib", - "rel": "/software/repository/github/gem-pasteur/macsylib", - "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", - "description": "Python library that help to detect of macromolecular, systems genetic pathways\u2026 in prokaryotes protein datasets", + "uid": "github/haiyang1986/TVAR", + "url": "https://github.com/haiyang1986/TVAR", + "rel": "/software/repository/github/haiyang1986/TVAR", + "avatar": "https://avatars.githubusercontent.com/u/52192058?v=4", + "description": "a deep learning approach for assessing tissue-specific functional effects of non-coding variants", "topics": [] }, { - "uid": "github/gem-pasteur/macsyfinder", - "url": "https://github.com/gem-pasteur/macsyfinder", - "rel": "/software/repository/github/gem-pasteur/macsyfinder", - "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", - "description": "MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.", + "uid": "github/LiShuTJ/NDNet", + "url": "https://github.com/LiShuTJ/NDNet", + "rel": "/software/repository/github/LiShuTJ/NDNet", + "avatar": "https://avatars.githubusercontent.com/u/100602054?v=4", + "description": null, "topics": [] }, { - "uid": "github/kiyo-masui/bitshuffle", - "url": "https://github.com/kiyo-masui/bitshuffle", - "rel": "/software/repository/github/kiyo-masui/bitshuffle", - "avatar": "https://avatars.githubusercontent.com/u/399263?v=4", - "description": "Filter for improving compression of typed binary data.", + "uid": "github/AarhusCosmology/connect_public", + "url": "https://github.com/AarhusCosmology/connect_public", + "rel": "/software/repository/github/AarhusCosmology/connect_public", + "avatar": "https://avatars.githubusercontent.com/u/61975979?v=4", + "description": "Public branch of CONNECT", "topics": [] }, { - "uid": "github/jfwallin/JSPAM", - "url": "https://github.com/jfwallin/JSPAM", - "rel": "/software/repository/github/jfwallin/JSPAM", - "avatar": "https://avatars.githubusercontent.com/u/1709158?v=4", - "description": "Software for simulating interacting galaxies using a restricted three-body approximation", + "uid": "github/AarhusCosmology/prospect_public", + "url": "https://github.com/AarhusCosmology/prospect_public", + "rel": "/software/repository/github/AarhusCosmology/prospect_public", + "avatar": "https://avatars.githubusercontent.com/u/61975979?v=4", + "description": null, "topics": [] }, { - "uid": "github/NGSolve/ngsPETSc", - "url": "https://github.com/NGSolve/ngsPETSc", - "rel": "/software/repository/github/NGSolve/ngsPETSc", - "avatar": "https://avatars.githubusercontent.com/u/30256916?v=4", - "description": "ngsPETSc Docs", + "uid": "github/BartoszBartmanski/StoSpa2", + "url": "https://github.com/BartoszBartmanski/StoSpa2", + "rel": "/software/repository/github/BartoszBartmanski/StoSpa2", + "avatar": "https://avatars2.githubusercontent.com/u/16625050?v=4", + "description": "A C++ software package for stochastic simulations of spatially extended systems", "topics": [] }, { - "uid": "github/yuhaoran/CUBE", - "url": "https://github.com/yuhaoran/CUBE", - "rel": "/software/repository/github/yuhaoran/CUBE", - "avatar": "https://avatars.githubusercontent.com/u/6211228?v=4", - "description": "Cosmological N-body simulation code", + "uid": "github/davidechicco/geneExpressionFromGEO", + "url": "https://github.com/davidechicco/geneExpressionFromGEO", + "rel": "/software/repository/github/davidechicco/geneExpressionFromGEO", + "avatar": "https://avatars.githubusercontent.com/u/12862995?v=4", + "description": "geneExpressionFromGEO", "topics": [] }, { - "uid": "github/blebon/directChillFoam", - "url": "https://github.com/blebon/directChillFoam", - "rel": "/software/repository/github/blebon/directChillFoam", - "avatar": "https://avatars.githubusercontent.com/u/3886030?v=4", - "description": "OpenFOAM solver for direct chill casting", - "topics": [ - "casting", - "openfoam", - "computational-fluid-dynamics", - "simulation" - ] + "uid": "github/UncertainLab/Enlsip.jl", + "url": "https://github.com/UncertainLab/Enlsip.jl", + "rel": "/software/repository/github/UncertainLab/Enlsip.jl", + "avatar": "https://avatars.githubusercontent.com/u/139942346?v=4", + "description": "Enlsip.jl is the Julia version of a Fortran77 optimization library designed to solve nonlinear least squares problems under general nonlinear constraints.", + "topics": [] }, { - "uid": "github/sintefmath/SurfaceWaterIntegratedModeling.jl", - "url": "https://github.com/sintefmath/SurfaceWaterIntegratedModeling.jl", - "rel": "/software/repository/github/sintefmath/SurfaceWaterIntegratedModeling.jl", - "avatar": "https://avatars.githubusercontent.com/u/1901550?v=4", - "description": "SWIM - Surface Water Integrated Modeling", + "uid": "github/CDSP-SCPO/metadata-middleware", + "url": "https://github.com/CDSP-SCPO/metadata-middleware", + "rel": "/software/repository/github/CDSP-SCPO/metadata-middleware", + "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", + "description": null, "topics": [] }, { - "uid": "github/Hegghammer/daiR", - "url": "https://github.com/Hegghammer/daiR", - "rel": "/software/repository/github/Hegghammer/daiR", - "avatar": "https://avatars.githubusercontent.com/u/64712218?v=4", - "description": "R package for Google Document AI ", - "topics": [ - "ocr", - "r", - "google-cloud" - ] + "uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", + "url": "https://github.com/CDSP-SCPO/WPSS-for-ESS-webpanel", + "rel": "/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", + "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Martin-Fahrenberger/GTestimate", - "url": "https://github.com/Martin-Fahrenberger/GTestimate", - "rel": "/software/repository/github/Martin-Fahrenberger/GTestimate", - "avatar": "https://avatars.githubusercontent.com/u/20248502?v=4", - "description": "scRNA-seq normalization method, based on the Simple Good-Turing estimator", + "uid": "github/CDSP-SCPO/dataverse-feed", + "url": "https://github.com/CDSP-SCPO/dataverse-feed", + "rel": "/software/repository/github/CDSP-SCPO/dataverse-feed", + "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", + "description": "Embed a feed of your Dataverse items (collections, datasets, files) in your webpage using the Dataverse search API. JavaScript module built with Svelte and Snowpack.", "topics": [ - "good-turing", - "scrna-seq" + "rdm", + "repository", + "research", + "data", + "javascript", + "dataverse", + "integration", + "api", + "svelte" ] }, { - "uid": "github/EigenDev/simbi", - "url": "https://github.com/EigenDev/simbi", - "rel": "/software/repository/github/EigenDev/simbi", - "avatar": "https://avatars.githubusercontent.com/u/29236993?v=4", - "description": "SIMBI is a 3D Heterogeneous Relativistic Gas Dynamics Code using the Cython framework to blend together C++, CUDA, HIP, and Python.", + "uid": "github/Eventdisplay/Eventdisplay", + "url": "https://github.com/Eventdisplay/Eventdisplay", + "rel": "/software/repository/github/Eventdisplay/Eventdisplay", + "avatar": "https://avatars.githubusercontent.com/u/50499294?v=4", + "description": "A reconstruction and analysis pipeline for ground-based imaging atmospheric Cherenkov Telescopes", "topics": [] }, { - "uid": "github/Sheng-Qi-Yang/HIILines", - "url": "https://github.com/Sheng-Qi-Yang/HIILines", - "rel": "/software/repository/github/Sheng-Qi-Yang/HIILines", - "avatar": "https://avatars.githubusercontent.com/u/31641147?v=4", - "description": "An analytical ionized ISM emission line model. ", + "uid": "github/s-goldman/Dusty-Evolved-Star-Kit", + "url": "https://github.com/s-goldman/Dusty-Evolved-Star-Kit", + "rel": "/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", + "avatar": "https://avatars3.githubusercontent.com/u/32876747?v=4", + "description": "SED-fitting python package for fitting evolved stars", "topics": [] }, { - "uid": "github/chainsawriot/sweater", - "url": "https://github.com/chainsawriot/sweater", - "rel": "/software/repository/github/chainsawriot/sweater", - "avatar": "https://avatars.githubusercontent.com/u/637269?v=4", - "description": "\ud83d\udc5a Speedy Word Embedding Association Test & Extras using R", + "uid": "github/ixakalabadie/ViSL3D", + "url": "https://github.com/ixakalabadie/ViSL3D", + "rel": "/software/repository/github/ixakalabadie/ViSL3D", + "avatar": "https://avatars.githubusercontent.com/u/71155566?v=4", + "description": "Python library to create interactive 3D visualisations of astrophysical spectral line data.", "topics": [ - "r", - "wordembedding", - "bias-detection", - "textanalysis" + "3d", + "astrophysics", + "datacube", + "spectral-lines", + "visualisation", + "interac" ] }, { - "uid": "github/chainsawriot/oolong", - "url": "https://github.com/chainsawriot/oolong", - "rel": "/software/repository/github/chainsawriot/oolong", - "avatar": "https://avatars1.githubusercontent.com/u/637269?v=4", - "description": "oolong \ud83c\udf75 : create and administrate validation tests for typical automated content analysis tools.", + "uid": "github/NERDSITU/superblockify", + "url": "https://github.com/NERDSITU/superblockify", + "rel": "/software/repository/github/NERDSITU/superblockify", + "avatar": "https://avatars.githubusercontent.com/u/95076718?v=4", + "description": "Source code for superblockify", "topics": [ - "r", - "textanalysis", - "topicmodeling", - "validation" + "superblocks", + "urban-data-science", + "geospatial", + "network-analysis", + "urban-mobility", + "urban-planning", + "gis", + "osmnx", + "transportation-network" ] }, { - "uid": "github/threeML/threeML", - "url": "https://github.com/threeML/threeML", - "rel": "/software/repository/github/threeML/threeML", - "avatar": "https://avatars.githubusercontent.com/u/44911645?v=4", - "description": "The Multi-Mission Maximum Likelihood framework (3ML)", - "topics": [ - "python-environment", - "xspec", - "fermi", - "fermi-science", - "xspec-models", - "python", - "astronomy", - "spectral-analysis", - "multi-wavelength", - "hawc" - ] + "uid": "github/aksholokhov/pysr3", + "url": "https://github.com/aksholokhov/pysr3", + "rel": "/software/repository/github/aksholokhov/pysr3", + "avatar": "https://avatars.githubusercontent.com/u/6594476?v=4", + "description": "SciKit-Learn compatible library for training mixed-effects models.", + "topics": [] }, { - "uid": "github/threeML/astromodels", - "url": "https://github.com/threeML/astromodels", - "rel": "/software/repository/github/threeML/astromodels", - "avatar": "https://avatars.githubusercontent.com/u/44911645?v=4", - "description": "Spatial and spectral models for astrophysics", - "topics": [ - "astrophysics", - "spectral-models", - "modeling-tool", - "astronomy", - "multi-wavelength", - "multi-messenger" - ] + "uid": "github/cma2015/iwa-miRNA", + "url": "https://github.com/cma2015/iwa-miRNA", + "rel": "/software/repository/github/cma2015/iwa-miRNA", + "avatar": "https://avatars.githubusercontent.com/u/14050193?v=4", + "description": "iwa-miRNA is a web-based platform for interactive annotation of plant miRNAs", + "topics": [] }, { - "uid": "github/jakevdp/wpca", - "url": "https://github.com/jakevdp/wpca", - "rel": "/software/repository/github/jakevdp/wpca", - "avatar": "https://avatars.githubusercontent.com/u/781659?v=4", - "description": "Weighted Principal Component Analysis (PCA) in Python", + "uid": "github/elizakempton/Exo_Transmit", + "url": "https://github.com/elizakempton/Exo_Transmit", + "rel": "/software/repository/github/elizakempton/Exo_Transmit", + "avatar": "https://avatars.githubusercontent.com/u/7716539?v=4", + "description": "Exo-Transmit radiative transfer code for calculating exoplanet transmission spectra", "topics": [] }, { - "uid": "github/exomishra/kobe", - "url": "https://github.com/exomishra/kobe", - "rel": "/software/repository/github/exomishra/kobe", - "avatar": "https://avatars.githubusercontent.com/u/40165860?v=4", - "description": "A program to add geometrical limitations and detection biases of a transit survey to theoretical planetary systems.", + "uid": "github/mariakotouza/TRIP-Tool", + "url": "https://github.com/mariakotouza/TRIP-Tool", + "rel": "/software/repository/github/mariakotouza/TRIP-Tool", + "avatar": "https://avatars0.githubusercontent.com/u/22618154?v=4", + "description": "Antigen receptor gene profiler: A software framework that provides analytics services on NGS Data", "topics": [] }, { - "uid": "github/johnveitch/cpnest", - "url": "https://github.com/johnveitch/cpnest", - "rel": "/software/repository/github/johnveitch/cpnest", - "avatar": "https://avatars.githubusercontent.com/u/3687399?v=4", - "description": "Parallel nested sampling", - "topics": [ - "bayesian-inference", - "python", - "nested-sampling" - ] + "uid": "github/CEA-MetroCarac/pystack3d", + "url": "https://github.com/CEA-MetroCarac/pystack3d", + "rel": "/software/repository/github/CEA-MetroCarac/pystack3d", + "avatar": "https://avatars.githubusercontent.com/u/111420199?v=4", + "description": "Package to process images stacks (typically from 3D FIB-SEM)", + "topics": [] }, { - "uid": "github/NBISweden/AGAT", - "url": "https://github.com/NBISweden/AGAT", - "rel": "/software/repository/github/NBISweden/AGAT", - "avatar": "https://avatars.githubusercontent.com/u/1224807?v=4", - "description": "Another Gtf/Gff Analysis Toolkit", + "uid": "github/CEA-MetroCarac/fitspy", + "url": "https://github.com/CEA-MetroCarac/fitspy", + "rel": "/software/repository/github/CEA-MetroCarac/fitspy", + "avatar": "https://avatars.githubusercontent.com/u/111420199?v=4", + "description": "Generic tool dedicated to fit spectra in python ", "topics": [ - "agat", - "gff", - "perl-scripts", - "gtf", - "standardisation", - "gff-format", - "toolkit" + "decomposition", + "fitting", + "gaussian", + "lmfit", + "lorentzian", + "map", + "python", + "spectral-analysis", + "spectrum" ] }, { - "uid": "github/GabrielaCR/AGNfitter", - "url": "https://github.com/GabrielaCR/AGNfitter", - "rel": "/software/repository/github/GabrielaCR/AGNfitter", - "avatar": "https://avatars.githubusercontent.com/u/5812461?v=4", - "description": "SED-fitting code for AGN and galaxies from a MCMC approach", - "topics": [] - }, - { - "uid": "github/sstadick/perbase", - "url": "https://github.com/sstadick/perbase", - "rel": "/software/repository/github/sstadick/perbase", - "avatar": "https://avatars.githubusercontent.com/u/6712477?v=4", - "description": "Per-base per-nucleotide depth analysis", + "uid": "github/pni-lab/mlconfound", + "url": "https://github.com/pni-lab/mlconfound", + "rel": "/software/repository/github/pni-lab/mlconfound", + "avatar": "https://avatars.githubusercontent.com/u/53299837?v=4", + "description": "Tools for analyzing and quantifying effects of counfounder variables on machine learning model predictions.", "topics": [ - "rust", - "bioinformatics", - "cli-app" + "confounders", + "machine-learning", + "predictive-modeling", + "permutation-test", + "conditional-independence" ] }, { - "uid": "github/sstadick/crabz", - "url": "https://github.com/sstadick/crabz", - "rel": "/software/repository/github/sstadick/crabz", - "avatar": "https://avatars.githubusercontent.com/u/6712477?v=4", - "description": "Like pigz, but rust", + "uid": "github/aprsa/ebai", + "url": "https://github.com/aprsa/ebai", + "rel": "/software/repository/github/aprsa/ebai", + "avatar": "https://avatars.githubusercontent.com/u/2669162?v=4", + "description": "Eclipsing Binaries with Artificial Intelligence", "topics": [] }, { - "uid": "github/bhhua/vacuumtunneling", - "url": "https://github.com/bhhua/VacuumTunneling", - "rel": "/software/repository/github/bhhua/vacuumtunneling", - "avatar": "https://avatars.githubusercontent.com/u/188728846?v=4", - "description": "A package for evaluating bubble profile with a renomalization factor", + "uid": "github/aprsa/dips", + "url": "https://github.com/aprsa/dips", + "rel": "/software/repository/github/aprsa/dips", + "avatar": "https://avatars.githubusercontent.com/u/2669162?v=4", + "description": "dips: detrending periodic signals in timeseries.", "topics": [] }, { - "uid": "github/caseyjlaw/tpipe", - "url": "https://github.com/caseyjlaw/tpipe", - "rel": "/software/repository/github/caseyjlaw/tpipe", - "avatar": "https://avatars.githubusercontent.com/u/1878317?v=4", - "description": "Python library to search radio interferometry data for dispersed (fast) transients **superseded by caseyjlaw/rtpipe**", + "uid": "github/neslusan/BELTCROSS2", + "url": "https://github.com/neslusan/BELTCROSS2", + "rel": "/software/repository/github/neslusan/BELTCROSS2", + "avatar": "https://avatars.githubusercontent.com/u/151740424?v=4", + "description": "A computer program calculating the closest approaches of asteroid to the mean orbits of meteoroid streams, new version upploaded on January 15, 2024.", "topics": [] }, { - "uid": "github/caseyjlaw/rtpipe", - "url": "https://github.com/caseyjlaw/rtpipe", - "rel": "/software/repository/github/caseyjlaw/rtpipe", - "avatar": "https://avatars.githubusercontent.com/u/1878317?v=4", - "description": "Pipeline for real-time fast transient detection in radio interferometric data (see also https://github.com/realfastvla/rfpipe)", - "topics": [ - "astronomy", - "interferometry", - "radio", - "casa", - "python", - "notebook", - "binder", - "jupyter-notebook", - "transients" - ] - }, - { - "uid": "github/sbmlteam/moccasin", - "url": "https://github.com/sbmlteam/moccasin", - "rel": "/software/repository/github/sbmlteam/moccasin", - "avatar": "https://avatars.githubusercontent.com/u/1799692?v=4", - "description": "MOCCASIN translates basic ODE-based MATLAB models of biological processes into SBML format.", - "topics": [ - "matlab", - "sbml", - "conversion", - "python", - "systems-biology", - "differential-equations", - "ode", - "ode-model" - ] - }, - { - "uid": "github/pierrepeterlongo/back_to_sequences", - "url": "https://github.com/pierrepeterlongo/back_to_sequences", - "rel": "/software/repository/github/pierrepeterlongo/back_to_sequences", - "avatar": "https://avatars.githubusercontent.com/u/8103041?v=4", - "description": null, + "uid": "github/ntveem/sterile-dm", + "url": "https://github.com/ntveem/sterile-dm", + "rel": "/software/repository/github/ntveem/sterile-dm", + "avatar": "https://avatars.githubusercontent.com/u/9044666?v=4", + "description": "A program to follow the production of sterile neutrino dark matter", "topics": [] }, { - "uid": "github/MaudeDavidLab/GMEmbeddings", - "url": "https://github.com/MaudeDavidLab/GMEmbeddings", - "rel": "/software/repository/github/MaudeDavidLab/GMEmbeddings", - "avatar": "https://avatars.githubusercontent.com/u/36453608?v=4", - "description": null, + "uid": "github/astrobrent/itera", + "url": "https://github.com/astrobrent/itera", + "rel": "/software/repository/github/astrobrent/itera", + "avatar": "https://avatars.githubusercontent.com/u/3286205?v=4", + "description": "ITERA: IDL line ratio tool", "topics": [] }, { - "uid": "github/everval/LongMemory.jl", - "url": "https://github.com/everval/LongMemory.jl", - "rel": "/software/repository/github/everval/LongMemory.jl", - "avatar": "https://avatars.githubusercontent.com/u/26837739?v=4", - "description": "Julia package to generate, estimate, and forecast long memory processes", - "topics": [ - "arfima", - "fractional-differencing", - "har-model", - "long-memory", - "long-range-dependence", - "time-series", - "time-series-analysis", - "cross-sectional-aggregation", - "stochastic-duration-shock", - "strong-persistence", - "forecasting" - ] + "uid": "github/astrobrent/mappings", + "url": "https://github.com/astrobrent/mappings", + "rel": "/software/repository/github/astrobrent/mappings", + "avatar": "https://avatars.githubusercontent.com/u/3286205?v=4", + "description": "MAPPINGSIII repository", + "topics": [] }, { - "uid": "github/EhsanGharibNezhad/TelescopeML", - "url": "https://github.com/EhsanGharibNezhad/TelescopeML", - "rel": "/software/repository/github/EhsanGharibNezhad/TelescopeML", - "avatar": "https://avatars.githubusercontent.com/u/22139918?v=4", - "description": "Deep Convolutional Neural Networks and Machine Learning Models for Analyzing Stellar and Exoplanetary Telescope Spectra", + "uid": "github/radicamc/applesoss", + "url": "https://github.com/radicamc/applesoss", + "rel": "/software/repository/github/radicamc/applesoss", + "avatar": "https://avatars.githubusercontent.com/u/44100686?v=4", + "description": "A Producer of ProfiLEs for SOSS", "topics": [ "astronomy", - "atmospheric-modelling", - "convolutional-neural-networks", - "machine-learning", - "star", - "telescope" + "exoplanet-atmospheres", + "exoplanets", + "jwst", + "niriss", + "python", + "soss", + "spectroscopy" ] }, { - "uid": "github/TRASAL/psrdada-python", - "url": "https://github.com/TRASAL/psrdada-python", - "rel": "/software/repository/github/TRASAL/psrdada-python", - "avatar": "https://avatars.githubusercontent.com/u/20970511?v=4", - "description": "Python bindings to the PSRDada ringbuffer implementation", + "uid": "github/radicamc/exoTEDRF", + "url": "https://github.com/radicamc/exoTEDRF", + "rel": "/software/repository/github/radicamc/exoTEDRF", + "avatar": "https://avatars.githubusercontent.com/u/44100686?v=4", + "description": "Tools for end-to-end reduction of JWST exoplanet observations", "topics": [ - "astronomy", - "data", - "ringbuffer", - "psrdada", - "python", - "nlesc" + "atmosphere", + "exoplanet", + "jwst", + "miri", + "niriss", + "nirspec", + "soss", + "spectroscopy", + "tedorf" ] }, { - "uid": "github/TRASAL/AMBER", - "url": "https://github.com/TRASAL/AMBER", - "rel": "/software/repository/github/TRASAL/AMBER", - "avatar": "https://avatars.githubusercontent.com/u/20970511?v=4", - "description": "A many-core transient searching pipeline, designed to search in real-time for Fast Radio Bursts.", - "topics": [] + "uid": "github/mariapetro/LeHaMoC", + "url": "https://github.com/mariapetro/LeHaMoC", + "rel": "/software/repository/github/mariapetro/LeHaMoC", + "avatar": "https://avatars.githubusercontent.com/u/34586264?v=4", + "description": "Leptonic-Hadronic Modeling Code for High-Energy Astrophysical Sources", + "topics": [ + "simulation" + ] }, { - "uid": "github/FZJ-IEK3-VSA/ETHOS_PeNALPS", - "url": "https://github.com/FZJ-IEK3-VSA/ETHOS_PeNALPS", - "rel": "/software/repository/github/FZJ-IEK3-VSA/ETHOS_PeNALPS", - "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", - "description": "Petri Net Agent based Load Profile Simulator", + "uid": "github/davtsang/slimplectic", + "url": "https://github.com/davtsang/slimplectic", + "rel": "/software/repository/github/davtsang/slimplectic", + "avatar": "https://avatars.githubusercontent.com/u/8050908?v=4", + "description": "Python code for generating and running \"slimplectic\" integrators (nonconservative variational integrators)", "topics": [] }, { - "uid": "github/FZJ-IEK3-VSA/FINE", - "url": "https://github.com/FZJ-IEK3-VSA/FINE", - "rel": "/software/repository/github/FZJ-IEK3-VSA/FINE", - "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", - "description": "The ETHOS.FINE python package provides a framework for modeling, optimizing and assessing energy systems", - "topics": [] + "uid": "github/sashakolpakov/dire-jax", + "url": "https://github.com/sashakolpakov/dire-jax", + "rel": "/software/repository/github/sashakolpakov/dire-jax", + "avatar": "https://avatars.githubusercontent.com/u/5302373?v=4", + "description": "DImensionality REduction in JAX", + "topics": [ + "data-science", + "data-visualization", + "dimensionality-reduction", + "embeddings", + "jax", + "machine-learning" + ] }, { - "uid": "github/FZJ-IEK3-VSA/LoadProfileGenerator", - "url": "https://github.com/FZJ-IEK3-VSA/LoadProfileGenerator", - "rel": "/software/repository/github/FZJ-IEK3-VSA/LoadProfileGenerator", - "avatar": "https://avatars.githubusercontent.com/u/28654423?v=4", - "description": "Program for generating load curves for residential consumers. Agentbased and extremly detailed.", + "uid": "github/latrop/DECA", + "url": "https://github.com/latrop/DECA", + "rel": "/software/repository/github/latrop/DECA", + "avatar": "https://avatars.githubusercontent.com/u/382630?v=4", + "description": "A tool for decomposition of images of galaxies", "topics": [] }, { - "uid": "github/sczesla/PyAstronomy", - "url": "https://github.com/sczesla/PyAstronomy", - "rel": "/software/repository/github/sczesla/PyAstronomy", - "avatar": "https://avatars.githubusercontent.com/u/330769?v=4", - "description": "A collection of astronomy-related routines in Python", + "uid": "github/moeyensj/atm", + "url": "https://github.com/moeyensj/atm", + "rel": "/software/repository/github/moeyensj/atm", + "avatar": "https://avatars.githubusercontent.com/u/4206654?v=4", + "description": "Asteroid Thermal Modeling", "topics": [ "python", + "asteroids", "astronomy", - "data-analysis" + "solar-system", + "mcmc", + "pymc3", + "minor-planets", + "open-source-project" ] }, { - "uid": "github/cblakeastro/intensitypower", - "url": "https://github.com/cblakeastro/intensitypower", - "rel": "/software/repository/github/cblakeastro/intensitypower", - "avatar": "https://avatars.githubusercontent.com/u/34926798?v=4", - "description": null, + "uid": "github/genouest/biomaj-cli", + "url": "https://github.com/genouest/biomaj-cli", + "rel": "/software/repository/github/genouest/biomaj-cli", + "avatar": "https://avatars.githubusercontent.com/u/1004255?v=4", + "description": "CLI for BioMAJ", "topics": [] }, { - "uid": "github/vterron/lemon", - "url": "https://github.com/vterron/lemon", - "rel": "/software/repository/github/vterron/lemon", - "avatar": "https://avatars.githubusercontent.com/u/1575425?v=4", - "description": "Differential photometry for humans (and astronomers)", + "uid": "github/genouest/biomaj-daemon", + "url": "https://github.com/genouest/biomaj-daemon", + "rel": "/software/repository/github/genouest/biomaj-daemon", + "avatar": "https://avatars.githubusercontent.com/u/1004255?v=4", + "description": "micro service to manage biomaj client requests and bank updates", "topics": [] }, { - "uid": "github/isaackd/wcloud", - "url": "https://github.com/isaackd/wcloud", - "rel": "/software/repository/github/isaackd/wcloud", - "avatar": "https://avatars.githubusercontent.com/u/24992665?v=4", - "description": "Create word clouds", + "uid": "github/ABard0/MDGF-MCEC", + "url": "https://github.com/ABard0/MDGF-MCEC", + "rel": "/software/repository/github/ABard0/MDGF-MCEC", + "avatar": "https://avatars.githubusercontent.com/u/39459832?v=4", + "description": null, "topics": [] }, { - "uid": "github/pacificbiosciences/bam2fastx", - "url": "https://github.com/PacificBiosciences/bam2fastx", - "rel": "/software/repository/github/pacificbiosciences/bam2fastx", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.", + "uid": "github/pangenome/smoothxg", + "url": "https://github.com/pangenome/smoothxg", + "rel": "/software/repository/github/pangenome/smoothxg", + "avatar": "https://avatars.githubusercontent.com/u/60657583?v=4", + "description": "linearize and simplify variation graphs using blocked partial order alignment", "topics": [] }, { - "uid": "github/CouncilDataProject/cookiecutter-cdp-deployment", - "url": "https://github.com/CouncilDataProject/cookiecutter-cdp-deployment", - "rel": "/software/repository/github/CouncilDataProject/cookiecutter-cdp-deployment", - "avatar": "https://avatars.githubusercontent.com/u/32205865?v=4", - "description": "Cookiecutter template for creating new CDP instances.", - "topics": [ - "cookiecutter-template", - "cdp-deployments", - "civic-tech", - "open-government", - "local-government", - "government-data", - "hacktoberfest" - ] - }, - { - "uid": "github/CouncilDataProject/speakerbox", - "url": "https://github.com/CouncilDataProject/speakerbox", - "rel": "/software/repository/github/CouncilDataProject/speakerbox", - "avatar": "https://avatars.githubusercontent.com/u/32205865?v=4", - "description": "Speakerbox: Fine-tune Audio Transformers for speaker identification.", - "topics": [ - "audio-classification", - "transformers", - "speaker-id", - "speaker-identification" - ] - }, - { - "uid": "github/phenology/cgc", - "url": "https://github.com/phenology/cgc", - "rel": "/software/repository/github/phenology/cgc", - "avatar": "https://avatars.githubusercontent.com/u/26253666?v=4", - "description": "A clustering tool for geospatial applications", + "uid": "github/ewanbarr/peasoup", + "url": "https://github.com/ewanbarr/peasoup", + "rel": "/software/repository/github/ewanbarr/peasoup", + "avatar": "https://avatars.githubusercontent.com/u/1140812?v=4", + "description": "C++/CUDA GPU pulsar searching library", "topics": [] }, { - "uid": "github/NREL/G2Aero", - "url": "https://github.com/NREL/G2Aero", - "rel": "/software/repository/github/NREL/G2Aero", - "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", - "description": "Separable shape tensors for aerodynamic design", + "uid": "github/Lyalpha/spalipy", + "url": "https://github.com/Lyalpha/spalipy", + "rel": "/software/repository/github/Lyalpha/spalipy", + "avatar": "https://avatars.githubusercontent.com/u/12103194?v=4", + "description": "Detection-based astronomical image registration.", "topics": [] }, { - "uid": "github/NREL/VirtualEngineering", - "url": "https://github.com/NREL/VirtualEngineering", - "rel": "/software/repository/github/NREL/VirtualEngineering", - "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", - "description": "The Virtual Engineering repository", + "uid": "github/OrlandoLam/SAMT", + "url": "https://github.com/OrlandoLam/SAMT", + "rel": "/software/repository/github/OrlandoLam/SAMT", + "avatar": "https://avatars.githubusercontent.com/u/67990560?v=4", + "description": "South Australian Macrobenthic Traits database ", "topics": [] }, { - "uid": "github/NREL/graph-env", - "url": "https://github.com/NREL/graph-env", - "rel": "/software/repository/github/NREL/graph-env", - "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", - "description": "Reinforcement learning for combinatorial optimization over directed graphs", - "topics": [ - "graph-algorithms", - "gym-environment", - "machine-learning", - "python", - "ray", - "reinforcement-learning" - ] - }, - { - "uid": "github/NREL/OpenOA", - "url": "https://github.com/NREL/OpenOA", - "rel": "/software/repository/github/NREL/OpenOA", - "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", - "description": "This library provides a framework for working with large timeseries data from wind plants, such as SCADA. Its development has been motivated by the WP3 Benchmarking (PRUF) project, which aims to provide a reference implementation for plant-level performance assessment.", + "uid": "github/danielemichilli/DM_phase", + "url": "https://github.com/danielemichilli/DM_phase", + "rel": "/software/repository/github/danielemichilli/DM_phase", + "avatar": "https://avatars.githubusercontent.com/u/7848257?v=4", + "description": "Tool to calculate the best dispersion measure for a burst using phase information.", "topics": [] }, { - "uid": "github/epic-astronomy/EPIC", - "url": "https://github.com/epic-astronomy/EPIC", - "rel": "/software/repository/github/epic-astronomy/EPIC", - "avatar": "https://avatars.githubusercontent.com/u/49343403?v=4", - "description": null, + "uid": "github/danielemichilli/SpS", + "url": "https://github.com/danielemichilli/SpS", + "rel": "/software/repository/github/danielemichilli/SpS", + "avatar": "https://avatars.githubusercontent.com/u/7848257?v=4", + "description": "Single-pulse Searcher", "topics": [] }, { - "uid": "github/BodeTobias/AutoPDEx", - "url": "https://github.com/BodeTobias/AutoPDEx", - "rel": "/software/repository/github/BodeTobias/AutoPDEx", - "avatar": "https://avatars.githubusercontent.com/u/149093216?v=4", - "description": "An Automized Partial Differential Equation solver based on JAX", + "uid": "github/PetroFit/petrofit", + "url": "https://github.com/PetroFit/petrofit", + "rel": "/software/repository/github/PetroFit/petrofit", + "avatar": "https://avatars.githubusercontent.com/u/80787894?v=4", + "description": "Package for calculating Petrosian properties and fitting galaxy light profiles", "topics": [ - "finite-element-method", - "jax", - "partial-differential-equations", - "sensitivity-analysis", - "differential-algebraic-equations", - "ordinary-differential-equations" + "petrosian", + "fitting", + "galfit", + "sersic", + "python", + "petrofit" ] }, { - "uid": "github/m2aia/m2aia", - "url": "https://github.com/m2aia/m2aia", - "rel": "/software/repository/github/m2aia/m2aia", - "avatar": "https://avatars.githubusercontent.com/u/115093852?v=4", - "description": "Mass spectrometry imaging applications for interactive analysis in MITK (M\u00b2aia)", + "uid": "github/sodascience/metasyn", + "url": "https://github.com/sodascience/metasyn", + "rel": "/software/repository/github/sodascience/metasyn", + "avatar": "https://avatars.githubusercontent.com/u/71822308?v=4", + "description": "Transparent and privacy-friendly synthetic data generation", "topics": [ - "interactive-analysis", - "mass-spectrometry-imaging", - "3d-reconstruction", - "multi-modal", - "docker" + "metadata", + "open-data", + "synthetic-data", + "privacy" ] }, { - "uid": "github/m2aia/pym2aia", - "url": "https://github.com/m2aia/pym2aia", - "rel": "/software/repository/github/m2aia/pym2aia", - "avatar": "https://avatars.githubusercontent.com/u/115093852?v=4", - "description": "pyM\u00b2aia is a Python package for memory-efficient access and processing of mass spectrometry image data. The I/O functionality is derived from the interactive desktop application M\u00b2aia. Special features are the batch generator utilities for deep learning applications.", + "uid": "github/TeaspoonTDA/teaspoon", + "url": "https://github.com/TeaspoonTDA/teaspoon", + "rel": "/software/repository/github/TeaspoonTDA/teaspoon", + "avatar": "https://avatars.githubusercontent.com/u/123311460?v=4", + "description": "Topological Signal Processing in Python", "topics": [ - "mass-spectrometry-imaging", + "persistent-homology", + "persistent-homology-graphs", + "signal-processing", + "tda", + "topological-data-analysis", + "topological-signal-processing", "python", - "deep-learning" + "tda-python" ] }, { - "uid": "github/AshleySpindler/AstroVaDEr-Public", - "url": "https://github.com/AshleySpindler/AstroVaDEr-Public", - "rel": "/software/repository/github/AshleySpindler/AstroVaDEr-Public", - "avatar": "https://avatars.githubusercontent.com/u/16287289?v=4", + "uid": "github/wordsworthgroup/mars_redox_2021", + "url": "https://github.com/wordsworthgroup/mars_redox_2021", + "rel": "/software/repository/github/wordsworthgroup/mars_redox_2021", + "avatar": "https://avatars.githubusercontent.com/u/10161055?v=4", "description": null, "topics": [] }, { - "uid": "github/mlares/hearsay", - "url": "https://github.com/mlares/hearsay", - "rel": "/software/repository/github/mlares/hearsay", - "avatar": "https://avatars.githubusercontent.com/u/4029546?v=4", - "description": "Simulations for the probability of alien contact", + "uid": "github/ishinder/EASTR", + "url": "https://github.com/ishinder/EASTR", + "rel": "/software/repository/github/ishinder/EASTR", + "avatar": "https://avatars.githubusercontent.com/u/32040472?v=4", + "description": "Emending Alignment of Spliced Transcript Reads", "topics": [] }, { - "uid": "github/MesquiteProject/MesquiteCore", - "url": "https://github.com/MesquiteProject/MesquiteCore", - "rel": "/software/repository/github/MesquiteProject/MesquiteCore", - "avatar": "https://avatars.githubusercontent.com/u/6061432?v=4", - "description": "The core Mesquite repository", - "topics": [] + "uid": "github/jupyterlab/jupyterlab", + "url": "https://github.com/jupyterlab/jupyterlab", + "rel": "/software/repository/github/jupyterlab/jupyterlab", + "avatar": "https://avatars.githubusercontent.com/u/22800682?v=4", + "description": "JupyterLab computational environment.", + "topics": [ + "jupyterlab", + "jupyter" + ] }, { - "uid": "github/andreasmang/claire", - "url": "https://github.com/andreasmang/claire", - "rel": "/software/repository/github/andreasmang/claire", - "avatar": "https://avatars.githubusercontent.com/u/13557296?v=4", - "description": "Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)", + "uid": "github/MD-Studio/MDStudio", + "url": "https://github.com/MD-Studio/MDStudio", + "rel": "/software/repository/github/MD-Studio/MDStudio", + "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", + "description": "A general framework for microservice based distributed applications", "topics": [ - "image-registration", - "parallel-computing", - "medical-image-computing" + "python", + "crossbar", + "microservice-framework", + "science", + "scientific-computing", + "molecular-dynamics" ] }, { - "uid": "github/lys-devel/lys", - "url": "https://github.com/lys-devel/lys", - "rel": "/software/repository/github/lys-devel/lys", - "avatar": "https://avatars.githubusercontent.com/u/136776639?v=4", - "description": "Interactive multi-dimensional data analysis and visualization", + "uid": "github/MD-Studio/cerise", + "url": "https://github.com/MD-Studio/cerise", + "rel": "/software/repository/github/MD-Studio/cerise", + "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", + "description": "A REST service for running CWL workflows on remote clusters", "topics": [] }, { - "uid": "github/bharathramh/STRIDE-DB_Codes", - "url": "https://github.com/bharathramh/STRIDE-DB_Codes", - "rel": "/software/repository/github/bharathramh/STRIDE-DB_Codes", - "avatar": "https://avatars.githubusercontent.com/u/32830450?v=4", - "description": null, + "uid": "github/MD-Studio/cerulean", + "url": "https://github.com/MD-Studio/cerulean", + "rel": "/software/repository/github/MD-Studio/cerulean", + "avatar": "https://avatars2.githubusercontent.com/u/30114651?v=4", + "description": "A Python 3 library for talking to HPC clusters and supercomputers", "topics": [] }, { - "uid": "github/s4hts/HTStream", - "url": "https://github.com/s4hts/HTStream", - "rel": "/software/repository/github/s4hts/HTStream", - "avatar": "https://avatars.githubusercontent.com/u/64926039?v=4", - "description": "A high throughput sequence read toolset using a streaming approach facilitated by Linux pipes", - "topics": [ - "bioinformatics", - "bioinformatics-tool", - "genomics", - "streaming", - "linux-pipes", - "sequence-analysis", - "next-generation-sequencing" - ] - }, - { - "uid": "github/NCIP/visda", - "url": "https://github.com/NCIP/visda", - "rel": "/software/repository/github/NCIP/visda", - "avatar": "https://avatars0.githubusercontent.com/u/2387173?v=4", - "description": "VISDA (VIsual Statistical Data Analyzer) is analytical tool for cluster modeling and visualization of microarray data.", + "uid": "github/ACCarnall/SpectRes", + "url": "https://github.com/ACCarnall/SpectRes", + "rel": "/software/repository/github/ACCarnall/SpectRes", + "avatar": "https://avatars.githubusercontent.com/u/15688485?v=4", + "description": "SpectRes is a Python module which efficiently resamples spectra and their associated uncertainties onto an arbitrary wavelength grid. Read the documentation at", "topics": [] }, { - "uid": "github/herrsalmi/FConverter", - "url": "https://github.com/herrsalmi/FConverter", - "rel": "/software/repository/github/herrsalmi/FConverter", - "avatar": "https://avatars0.githubusercontent.com/u/5948256?v=4", - "description": "File format converter for FImpute2", + "uid": "github/ACCarnall/bagpipes", + "url": "https://github.com/ACCarnall/bagpipes", + "rel": "/software/repository/github/ACCarnall/bagpipes", + "avatar": "https://avatars.githubusercontent.com/u/15688485?v=4", + "description": "Bagpipes is a state of the art code for generating realistic model galaxy spectra and fitting these to spectroscopic and photometric observations. Users should install with pip, not by cloning the repository.", "topics": [] }, { - "uid": "github/andresmegias/gildas-class-python", - "url": "https://github.com/andresmegias/gildas-class-python", - "rel": "/software/repository/github/andresmegias/gildas-class-python", - "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", - "description": "Python pipeline to use GILDAS-CLASS in an automated way", - "topics": [] + "uid": "github/dstansby/pfsspy", + "url": "https://github.com/dstansby/pfsspy", + "rel": "/software/repository/github/dstansby/pfsspy", + "avatar": "https://avatars0.githubusercontent.com/u/6197628?v=4", + "description": "Potential Field Source Surface model package for Python", + "topics": [ + "python", + "physics", + "solar-physics", + "sun" + ] }, { - "uid": "github/andresmegias/richvalues", - "url": "https://github.com/andresmegias/richvalues", - "rel": "/software/repository/github/andresmegias/richvalues", - "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", - "description": "Python library for dealing with uncertainties and upper/lower limits", - "topics": [] + "uid": "github/yaml2sbml-dev/yaml2sbml", + "url": "https://github.com/yaml2sbml-dev/yaml2sbml", + "rel": "/software/repository/github/yaml2sbml-dev/yaml2sbml", + "avatar": "https://avatars.githubusercontent.com/u/69810793?v=4", + "description": "Little tool to convert an ODE model specified in the YAML format to SBML.", + "topics": [ + "sbml", + "petab", + "ode", + "ode-model", + "yaml" + ] }, { - "uid": "github/andresmegias/radex-python", - "url": "https://github.com/andresmegias/radex-python", - "rel": "/software/repository/github/andresmegias/radex-python", - "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", - "description": "Python interface for using the software RADEX", + "uid": "github/Sydney-Informatics-Hub/OmixLitMiner", + "url": "https://github.com/Sydney-Informatics-Hub/OmixLitMiner", + "rel": "/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", + "avatar": "https://avatars.githubusercontent.com/u/38518764?v=4", + "description": "A bioinformatics tool for prioritising biological leads from omics data using literature mining.", "topics": [] }, { - "uid": "github/DReichLab/EIG", - "url": "https://github.com/DReichLab/EIG", - "rel": "/software/repository/github/DReichLab/EIG", - "avatar": "https://avatars.githubusercontent.com/u/11320607?v=4", - "description": "The EIGENSOFT package combines functionality from our population genetics methods (Patterson et al. 2006) and our EIGENSTRAT stratification correction method (Price et al. 2006).", + "uid": "github/Sydney-Informatics-Hub/geodata-harvester", + "url": "https://github.com/Sydney-Informatics-Hub/geodata-harvester", + "rel": "/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", + "avatar": "https://avatars.githubusercontent.com/u/38518764?v=4", + "description": "Jumpstart your geospatial analysis with a ready-made set of spatial-temporal aligned raster maps and data frames", "topics": [] }, { - "uid": "github/TARGENE/TMLE.jl", - "url": "https://github.com/TARGENE/TMLE.jl", - "rel": "/software/repository/github/TARGENE/TMLE.jl", - "avatar": "https://avatars.githubusercontent.com/u/103381328?v=4", - "description": "A Julia implementation of the Targeted Minimum Loss-based Estimation", + "uid": "github/sap218/jabberwocky", + "url": "https://github.com/sap218/jabberwocky", + "rel": "/software/repository/github/sap218/jabberwocky", + "avatar": "https://avatars1.githubusercontent.com/u/15181526?v=4", + "description": "toolkit for those nonsensical ontologies", "topics": [ - "julia", - "machine-learning", - "statistics", - "tmle", - "targeted-learning", - "non-parametric-statistics", - "causal-inference", - "double-robust" + "ontology", + "python", + "python3", + "text", + "tfidf", + "extraction", + "json", + "jabberwocky" ] }, { - "uid": "github/tlambert03/pycudadecon", - "url": "https://github.com/tlambert03/pycudadecon", - "rel": "/software/repository/github/tlambert03/pycudadecon", - "avatar": "https://avatars.githubusercontent.com/u/1609449?v=4", - "description": "Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy", + "uid": "github/kwkx/IPRP", + "url": "https://github.com/kwkx/IPRP", + "rel": "/software/repository/github/kwkx/IPRP", + "avatar": "https://avatars.githubusercontent.com/u/44075781?v=4", + "description": "The implement of IPRP and related nomograms.", "topics": [] }, { - "uid": "github/inonchiu/ComEst", - "url": "https://github.com/inonchiu/ComEst", - "rel": "/software/repository/github/inonchiu/ComEst", - "avatar": "https://avatars.githubusercontent.com/u/5868298?v=4", - "description": "ComEst - a completeness estimator", + "uid": "github/jan-rybizki/gdr2_completeness", + "url": "https://github.com/jan-rybizki/gdr2_completeness", + "rel": "/software/repository/github/jan-rybizki/gdr2_completeness", + "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", + "description": "This package helps with downloading GaiaDR2 data and gives approximate completeness maps over the sky and per G magntude bin. It also has a function to query the GDR2 RVS sample selection function.", "topics": [] }, { - "uid": "github/Collab4exaNBody/exaDEM", - "url": "https://github.com/Collab4exaNBody/exaDEM", - "rel": "/software/repository/github/Collab4exaNBody/exaDEM", - "avatar": "https://avatars.githubusercontent.com/u/138599032?v=4", - "description": "ExaDEM is a HPC software solution in the field of computational simulations. ExaDEM is built on top of exaNBody platform.", + "uid": "github/jan-rybizki/Chempy", + "url": "https://github.com/jan-rybizki/Chempy", + "rel": "/software/repository/github/jan-rybizki/Chempy", + "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", + "description": "Start with the Chempy tutorial", "topics": [ - "dem", - "gpu", - "granular-media", - "hpc", - "mpi" + "scientific-computations", + "astronomy", + "mcmc", + "tutorial" ] }, { - "uid": "github/cosmo-sims/DISCO-DJ", - "url": "https://github.com/cosmo-sims/DISCO-DJ", - "rel": "/software/repository/github/cosmo-sims/DISCO-DJ", - "avatar": "https://avatars.githubusercontent.com/u/134970301?v=4", - "description": "DISCO-DJ: DIfferentiable Simulations for COsmology - Done with Jax", - "topics": [ - "autodiff", - "cosmological-simulations", - "cosmology", - "inference", - "large-scale-structure", - "particle-mesh", - "perturbation-theory", - "cosmology-inference", - "jax" - ] + "uid": "github/jan-rybizki/Galaxia_wrap", + "url": "https://github.com/jan-rybizki/Galaxia_wrap", + "rel": "/software/repository/github/jan-rybizki/Galaxia_wrap", + "avatar": "https://avatars.githubusercontent.com/u/25322899?v=4", + "description": "A few python scripts and a tutorial notebook to create and manipulate Galaxia mock catalogues", + "topics": [] }, { - "uid": "github/raufs/skDER", - "url": "https://github.com/raufs/skDER", - "rel": "/software/repository/github/raufs/skDER", - "avatar": "https://avatars.githubusercontent.com/u/4260723?v=4", - "description": "skDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and metagenomics. ", + "uid": "github/Rnazx/Scaling-Relations", + "url": "https://github.com/Rnazx/Scaling-Relations", + "rel": "/software/repository/github/Rnazx/Scaling-Relations", + "avatar": "https://avatars.githubusercontent.com/u/42196798?v=4", + "description": "Python code to find the scaling relations for the galactic magnetic fields in terms of observables.", "topics": [] }, { - "uid": "github/ArnaudCassan/microlensing", - "url": "https://github.com/ArnaudCassan/microlensing", - "rel": "/software/repository/github/ArnaudCassan/microlensing", - "avatar": "https://avatars.githubusercontent.com/u/25842440?v=4", - "description": "Gravitational microlensing", + "uid": "github/Social-Evolution-and-Behavior/anTraX", + "url": "https://github.com/Social-Evolution-and-Behavior/anTraX", + "rel": "/software/repository/github/Social-Evolution-and-Behavior/anTraX", + "avatar": "https://avatars.githubusercontent.com/u/16811010?v=4", + "description": "anTraX: high throughput tracking of color-tagged insects", "topics": [ - "microlensing", - "astronomy", - "numerical-computation", - "caustics", - "critical-curves" + "video-tracking", + "behavioral-tracking", + "collective-behavior", + "social-behavior", + "social-insects", + "ants", + "machine-vision", + "machine-learning", + "tensorflow" ] }, { - "uid": "github/shirtsgroup/physical_validation", - "url": "https://github.com/shirtsgroup/physical_validation", - "rel": "/software/repository/github/shirtsgroup/physical_validation", - "avatar": "https://avatars.githubusercontent.com/u/6166660?v=4", - "description": "Physical validation of molecular simulations", - "topics": [ - "physical-validation", - "molecular-simulation", - "molecular-dynamics", - "molecular-mechanics", - "python" - ] + "uid": "github/remingtonsexton/BADASS3", + "url": "https://github.com/remingtonsexton/BADASS3", + "rel": "/software/repository/github/remingtonsexton/BADASS3", + "avatar": "https://avatars.githubusercontent.com/u/25069504?v=4", + "description": "Bayesian AGN Decomposition Analysis for SDSS Spectra", + "topics": [] }, { - "uid": "github/yesint/EnCurv", - "url": "https://github.com/yesint/EnCurv", - "rel": "/software/repository/github/yesint/EnCurv", - "avatar": "https://avatars.githubusercontent.com/u/14368585?v=4", - "description": "Tools for maintaining predefined membrane curvature in MD simulations", + "uid": "github/ValeevGroup/mpqc", + "url": "https://github.com/ValeevGroup/mpqc", + "rel": "/software/repository/github/ValeevGroup/mpqc", + "avatar": "https://avatars.githubusercontent.com/u/5217762?v=4", + "description": "The Massively Parallel Quantum Chemistry program, MPQC, computes properties of atoms and molecules from first principles using the time independent Schr\u00f6dinger equation.", "topics": [] }, { - "uid": "github/inducer/modepy", - "url": "https://github.com/inducer/modepy", - "rel": "/software/repository/github/inducer/modepy", - "avatar": "https://avatars.githubusercontent.com/u/352067?v=4", - "description": "Modes and nodes for high-order discretizations", + "uid": "github/igrins/plp", + "url": "https://github.com/igrins/plp", + "rel": "/software/repository/github/igrins/plp", + "avatar": "https://avatars.githubusercontent.com/u/7800768?v=4", + "description": "IGRINS pipeline package v3", "topics": [] }, { - "uid": "github/genomehubs/goat-cli", - "url": "https://github.com/genomehubs/goat-cli", - "rel": "/software/repository/github/genomehubs/goat-cli", - "avatar": "https://avatars.githubusercontent.com/u/25362364?v=4", - "description": "Command Line Interface for Genomes on a Tree.", + "uid": "github/slacgismo/solar-data-tools", + "url": "https://github.com/slacgismo/solar-data-tools", + "rel": "/software/repository/github/slacgismo/solar-data-tools", + "avatar": "https://avatars.githubusercontent.com/u/19895500?v=4", + "description": "Some data analysis tools for working with historical PV solar time-series data sets. ", "topics": [] }, { - "uid": "github/hajimes/mmh3", - "url": "https://github.com/hajimes/mmh3", - "rel": "/software/repository/github/hajimes/mmh3", - "avatar": "https://avatars.githubusercontent.com/u/1262041?v=4", - "description": "Python extension for MurmurHash (MurmurHash3), a set of fast and robust hash functions.", + "uid": "github/HWang-Summit/HCGrid", + "url": "https://github.com/HWang-Summit/HCGrid", + "rel": "/software/repository/github/HWang-Summit/HCGrid", + "avatar": "https://avatars.githubusercontent.com/u/43237606?v=4", + "description": "HCGrid is a convolution-based gridding framework for radio astronomy on hybrid computing environments", "topics": [ - "cpython", - "hash", - "murmurhash", - "python", - "murmurhash3" + "astronomy", + "gridding", + "heterogeneous-computing", + "gpu", + "cuda" ] }, { - "uid": "github/jumphone/inferloop", - "url": "https://github.com/jumphone/InferLoop", - "rel": "/software/repository/github/jumphone/inferloop", - "avatar": "https://avatars.githubusercontent.com/u/14286721?v=4", - "description": "InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop", + "uid": "github/a-renzini/pygwb", + "url": "https://github.com/a-renzini/pygwb", + "rel": "/software/repository/github/a-renzini/pygwb", + "avatar": "https://avatars.githubusercontent.com/u/26894726?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/stemangiola/tidyHeatmap", + "url": "https://github.com/stemangiola/tidyHeatmap", + "rel": "/software/repository/github/stemangiola/tidyHeatmap", + "avatar": "https://avatars2.githubusercontent.com/u/7232890?v=4", + "description": "Draw heatmap simply using a tidy data frame", "topics": [ - "chromatin-structure", - "scatac-seq", - "single-cell-3d-genome-structure", - "single-cell-chromatin-accessibility", - "single-cell-multi-omics", - "spatial-chromatin-accessibility" + "heatmap", + "tidyverse", + "r", + "rstudio", + "tidy", + "plotting", + "tidy-data-frame", + "graphviz", + "complexheatmap", + "brewer", + "viridis", + "scale", + "mtcars", + "dplyr", + "custom-palette", + "tidybulk", + "tibble" ] }, { - "uid": "github/Heldenkombinat/Logodetect", - "url": "https://github.com/Heldenkombinat/Logodetect", - "rel": "/software/repository/github/Heldenkombinat/Logodetect", - "avatar": "https://avatars.githubusercontent.com/u/29208764?v=4", - "description": "Find logos in images and videos in just one-shot. Never be embarrassed again to say that you have a small data situation!", + "uid": "github/rikenbit/dcTensor", + "url": "https://github.com/rikenbit/dcTensor", + "rel": "/software/repository/github/rikenbit/dcTensor", + "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", + "description": "R package for Discrete Matrix/Tensor Decomposition", + "topics": [] + }, + { + "uid": "github/rikenbit/OnlinePCA.jl", + "url": "https://github.com/rikenbit/OnlinePCA.jl", + "rel": "/software/repository/github/rikenbit/OnlinePCA.jl", + "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", + "description": "Online Principal Component Analysis", "topics": [ - "one-shot-learning", - "logo-detection", - "object-detection", - "image-processing", - "video-processing", - "small-dataset" + "bioinformatics", + "dimensionality-reduction", + "julia", + "out-of-core-processing", + "pca", + "sparse-matrix" ] }, { - "uid": "github/tidymess-code/tidymess", - "url": "https://github.com/tidymess-code/tidymess", - "rel": "/software/repository/github/tidymess-code/tidymess", - "avatar": "https://avatars.githubusercontent.com/u/129500042?v=4", - "description": "Tidal Dynamics of Multi-body ExtraSolar Systems", + "uid": "github/rikenbit/OnlineNMF.jl", + "url": "https://github.com/rikenbit/OnlineNMF.jl", + "rel": "/software/repository/github/rikenbit/OnlineNMF.jl", + "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", + "description": "Online Non-negative Matrix Factorization", + "topics": [ + "bioinformatics", + "dimensionality-reduction", + "julia", + "nmf", + "out-of-core-processing", + "sparse-matrix" + ] + }, + { + "uid": "github/rikenbit/iTensor", + "url": "https://github.com/rikenbit/iTensor", + "rel": "/software/repository/github/rikenbit/iTensor", + "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", + "description": "R package for ICA-based Matrix/Tensor Decomposition", "topics": [] }, { - "uid": "github/fforster/delight", - "url": "https://github.com/fforster/DELIGHT", - "rel": "/software/repository/github/fforster/delight", - "avatar": "https://avatars.githubusercontent.com/u/5090828?v=4", - "description": "Deep Learning Identification of Galaxy Hosts in Transients", + "uid": "github/rikenbit/nnTensor", + "url": "https://github.com/rikenbit/nnTensor", + "rel": "/software/repository/github/rikenbit/nnTensor", + "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", + "description": "R package for Non-negative Tensor Decomposition", "topics": [] }, { - "uid": "github/cython/cython", - "url": "https://github.com/cython/cython", - "rel": "/software/repository/github/cython/cython", - "avatar": "https://avatars3.githubusercontent.com/u/486082?v=4", - "description": "The most widely used Python to C compiler", + "uid": "github/tscnlab/LightLogR", + "url": "https://github.com/tscnlab/LightLogR", + "rel": "/software/repository/github/tscnlab/LightLogR", + "avatar": "https://avatars.githubusercontent.com/u/78920096?v=4", + "description": "R package for processing and analysing light logger and optical radiation dosimeter data", "topics": [ - "python", - "cython", - "cpython", - "cpython-extensions", - "c", - "cpp", - "performance", - "big-data" + "dosimetry", + "light", + "rstats-package", + "time-series-analysis", + "wearable-devices", + "wearable-sensors" ] }, { - "uid": "github/mongibellili/QuantizedSystemSolver.jl", - "url": "https://github.com/mongibellili/QuantizedSystemSolver.jl", - "rel": "/software/repository/github/mongibellili/QuantizedSystemSolver.jl", - "avatar": "https://avatars.githubusercontent.com/u/59377156?v=4", - "description": "This is an ODE solver that implements the quantized state system methods: An approach that builds the solution by updating the system variables independently.", + "uid": "github/laurazara/IgIDivA", + "url": "https://github.com/laurazara/IgIDivA", + "rel": "/software/repository/github/laurazara/IgIDivA", + "avatar": "https://avatars.githubusercontent.com/u/55143969?v=4", + "description": null, "topics": [] }, { - "uid": "github/maximewack/viroCapt", - "url": "https://github.com/MaximeWack/viroCapt", - "rel": "/software/repository/github/maximewack/viroCapt", - "avatar": "https://avatars.githubusercontent.com/u/2104109?v=4", + "uid": "github/Feng-Ji-Lab/FedIRT", + "url": "https://github.com/Feng-Ji-Lab/FedIRT", + "rel": "/software/repository/github/Feng-Ji-Lab/FedIRT", + "avatar": "https://avatars.githubusercontent.com/u/166061424?v=4", "description": null, "topics": [] }, { - "uid": "github/pachterlab/kb_python", - "url": "https://github.com/pachterlab/kb_python", - "rel": "/software/repository/github/pachterlab/kb_python", - "avatar": "https://avatars.githubusercontent.com/u/10359946?v=4", - "description": "A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing", - "topics": [ - "bustools", - "kallisto", - "single-cell-rna-seq", - "rna-velocity-estimation", - "scrna-seq", - "kb-python" - ] + "uid": "github/ccsb-scripps/Illustrate", + "url": "https://github.com/ccsb-scripps/Illustrate", + "rel": "/software/repository/github/ccsb-scripps/Illustrate", + "avatar": "https://avatars.githubusercontent.com/u/47901817?v=4", + "description": "Biomolecular Illustration Tool", + "topics": [] }, { - "uid": "github/pachterlab/kallisto", - "url": "https://github.com/pachterlab/kallisto", - "rel": "/software/repository/github/pachterlab/kallisto", - "avatar": "https://avatars.githubusercontent.com/u/10359946?v=4", - "description": "Near-optimal RNA-Seq quantification", - "topics": [ - "kallisto", - "rna-seq", - "pseudoalignment" - ] + "uid": "github/kennethcarrell/ATARRI", + "url": "https://github.com/kennethcarrell/ATARRI", + "rel": "/software/repository/github/kennethcarrell/ATARRI", + "avatar": "https://avatars.githubusercontent.com/u/63117072?v=4", + "description": "A TESS Archive RR Lyrae Classifier", + "topics": [] }, { - "uid": "github/bramvandijk88/cacatoo", - "url": "https://github.com/bramvandijk88/cacatoo", - "rel": "/software/repository/github/bramvandijk88/cacatoo", - "avatar": "https://avatars.githubusercontent.com/u/11132992?v=4", - "description": "A javascript library for building, exploring, and sharing spatially structured models of biological systems", + "uid": "github/ziyewang/ARG_SHINE", + "url": "https://github.com/ziyewang/ARG_SHINE", + "rel": "/software/repository/github/ziyewang/ARG_SHINE", + "avatar": "https://avatars.githubusercontent.com/u/37959011?v=4", + "description": null, "topics": [] }, { - "uid": "github/UrbanRuralSystems/ur-scape", - "url": "https://github.com/UrbanRuralSystems/ur-scape", - "rel": "/software/repository/github/UrbanRuralSystems/ur-scape", - "avatar": "https://avatars.githubusercontent.com/u/40052507?v=4", + "uid": "github/ziyewang/MetaBinner", + "url": "https://github.com/ziyewang/MetaBinner", + "rel": "/software/repository/github/ziyewang/MetaBinner", + "avatar": "https://avatars.githubusercontent.com/u/37959011?v=4", "description": null, "topics": [] }, { - "uid": "github/leesulab/arcMS", - "url": "https://github.com/leesulab/arcMS", - "rel": "/software/repository/github/leesulab/arcMS", - "avatar": "https://avatars.githubusercontent.com/u/151855212?v=4", - "description": "Mass spectrometry data converter from UNIFI to Parquet and HDF5 formats", + "uid": "github/JunTaoLuo/mctreesearch4j", + "url": "https://github.com/aqtech-ca/mctreesearch4j", + "rel": "/software/repository/github/JunTaoLuo/mctreesearch4j", + "avatar": "https://avatars.githubusercontent.com/u/92262712?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/Danko-Lab/dREG", + "url": "https://github.com/Danko-Lab/dREG", + "rel": "/software/repository/github/Danko-Lab/dREG", + "avatar": "https://avatars.githubusercontent.com/u/6503971?v=4", + "description": "Detecting Regulatory Elements using GRO-seq and PRO-seq", "topics": [ - "converter", - "mass-spectrometry", - "non-target", - "r" + "gene-regulation", + "gro-seq", + "pro-seq", + "chro-seq", + "transcription-regulatory-elements" ] }, { - "uid": "github/kjschmidlab/GGoutlieR", - "url": "https://github.com/kjschmidlab/GGoutlieR", - "rel": "/software/repository/github/kjschmidlab/GGoutlieR", - "avatar": "https://avatars.githubusercontent.com/u/131003993?v=4", + "uid": "github/mrc-ide/sircovid", + "url": "https://github.com/mrc-ide/sircovid", + "rel": "/software/repository/github/mrc-ide/sircovid", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", "description": null, "topics": [] }, { - "uid": "github/hotokezaka/HeatingRate", - "url": "https://github.com/hotokezaka/HeatingRate", - "rel": "/software/repository/github/hotokezaka/HeatingRate", - "avatar": "https://avatars.githubusercontent.com/u/38815342?v=4", + "uid": "github/mrc-ide/covid19-forecasts-orderly", + "url": "https://github.com/mrc-ide/covid19-forecasts-orderly", + "rel": "/software/repository/github/mrc-ide/covid19-forecasts-orderly", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", "description": null, "topics": [] }, { - "uid": "github/saezlab/PHONEMeS", - "url": "https://github.com/saezlab/PHONEMeS", - "rel": "/software/repository/github/saezlab/PHONEMeS", - "avatar": "https://avatars.githubusercontent.com/u/9979042?v=4", - "description": " PHONEMeS (PHOsphorylation NEtworks for Mass Spectrometry) is an R package to model signalling networks based on untargeted phosphoproteomics", + "uid": "github/mrc-ide/global-lmic-reports-orderly", + "url": "https://github.com/mrc-ide/global-lmic-reports-orderly", + "rel": "/software/repository/github/mrc-ide/global-lmic-reports-orderly", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "COVID-19 forecast reports for LMICs", "topics": [] }, { - "uid": "github/saezlab/liana-py", - "url": "https://github.com/saezlab/liana-py", - "rel": "/software/repository/github/saezlab/liana-py", - "avatar": "https://avatars.githubusercontent.com/u/9979042?v=4", - "description": "LIANA+: an all-in-one framework for cell-cell communication", - "topics": [ - "cell-cell-communication", - "ligand-receptor", - "python", - "single-cell", - "single-cell-rna-seq", - "spatial", - "spatialomics" - ] + "uid": "github/mrc-ide/dde", + "url": "https://github.com/mrc-ide/dde", + "rel": "/software/repository/github/mrc-ide/dde", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":clock1130::soon::clock9: Delay differential equation solver", + "topics": [] }, { - "uid": "github/mzkhalid039/DWBuilder", - "url": "https://github.com/mzkhalid039/DWBuilder", - "rel": "/software/repository/github/mzkhalid039/DWBuilder", - "avatar": "https://avatars.githubusercontent.com/u/52278972?v=4", - "description": "Ferroelectric/Ferroelastic domain wall builder", + "uid": "github/mrc-ide/drjacoby", + "url": "https://github.com/mrc-ide/drjacoby", + "rel": "/software/repository/github/mrc-ide/drjacoby", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "Flexible Markov chain monte carlo via reparameterization", + "topics": [] + }, + { + "uid": "github/mrc-ide/rrq", + "url": "https://github.com/mrc-ide/rrq", + "rel": "/software/repository/github/mrc-ide/rrq", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":runner::runner::runner: Lightweight Redis queues", "topics": [ - "ferroelectric-domains", - "ferroelectrics", - "domain-walls", - "atomic", - "interface-builder" + "infrastructure", + "cluster" ] }, { - "uid": "github/MichaelSel/edoJS", - "url": "https://github.com/MichaelSel/edoJS", - "rel": "/software/repository/github/MichaelSel/edoJS", - "avatar": "https://avatars.githubusercontent.com/u/6091960?v=4", - "description": "A set of functions for manipulating musical pitches within a given EDO", + "uid": "github/mrc-ide/PhyDyn", + "url": "https://github.com/mrc-ide/PhyDyn", + "rel": "/software/repository/github/mrc-ide/PhyDyn", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "PhyDyn: Epidemiological modelling in BEAST", "topics": [] }, { - "uid": "github/CrowdTruth/CrowdTruth", - "url": "https://github.com/CrowdTruth/CrowdTruth", - "rel": "/software/repository/github/CrowdTruth/CrowdTruth", - "avatar": "https://avatars3.githubusercontent.com/u/8793398?v=4", - "description": "Version 1.0 of the CrowdTruth Framework for crowdsourcing ground truth data, for training and evaluation of cognitive computing systems. Check out also version 2.0 at https://github.com/CrowdTruth/CrowdTruth-core. Data collected with CrowdTruth methodology: http://data.crowdtruth.org/. Our papers: http://crowdtruth.org/papers/", - "topics": [ - "crowdtruth-framework", - "crowdtruth-work-ow", - "quality", - "microtasks", - "javascript", - "evaluation" - ] + "uid": "github/mrc-ide/EpiEstim", + "url": "https://github.com/mrc-ide/EpiEstim", + "rel": "/software/repository/github/mrc-ide/EpiEstim", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "A tool to estimate time varying instantaneous reproduction number during epidemics", + "topics": [] }, { - "uid": "github/muzafferarikan/gNOMO2", - "url": "https://github.com/muzafferarikan/gNOMO2", - "rel": "/software/repository/github/muzafferarikan/gNOMO2", - "avatar": "https://avatars.githubusercontent.com/u/92356412?v=4", - "description": "gNOMO2 allows integrated multi-omics analyses of microbiomes", + "uid": "github/mrc-ide/provisionr", + "url": "https://github.com/mrc-ide/provisionr", + "rel": "/software/repository/github/mrc-ide/provisionr", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":package::package::arrow_right::classical_building: Provision a library of R packages", "topics": [ - "amplicon-sequencing", - "metagenomics", - "metaproteomics", - "metatranscriptomics", - "microbiome", - "multi-omics" + "infrastructure", + "cluster" ] }, { - "uid": "github/ecological-cities/home2park", - "url": "https://github.com/ecological-cities/home2park", - "rel": "/software/repository/github/ecological-cities/home2park", - "avatar": "https://avatars.githubusercontent.com/u/65454754?v=4", - "description": "home2park: Assess the spatial provision of urban parks", + "uid": "github/mrc-ide/cinterpolate", + "url": "https://github.com/mrc-ide/cinterpolate", + "rel": "/software/repository/github/mrc-ide/cinterpolate", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":bar_chart::arrow_right::wavy_dash: Interpolating functions from C, in R", "topics": [ - "cities", - "recreation", - "parks", - "geoinformatics", - "spatial" + "infrastructure" ] }, { - "uid": "github/EdgeVPNio/evio", - "url": "https://github.com/EdgeVPNio/evio", - "rel": "/software/repository/github/EdgeVPNio/evio", - "avatar": "https://avatars.githubusercontent.com/u/63874761?v=4", - "description": "Virtualized overlay networking for the fog. The Evio network spans the continuum, from the cloud to the edge, providing a virtual private layer 2 network suitable for edge devices in IoT workloads.", + "uid": "github/mrc-ide/dust", + "url": "https://github.com/mrc-ide/dust", + "rel": "/software/repository/github/mrc-ide/dust", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":sparkles::sparkles::sparkles: Iterate multiple realisations of stochastic models", "topics": [] }, { - "uid": "github/rkkuang/triplelens", - "url": "https://github.com/rkkuang/triplelens", - "rel": "/software/repository/github/rkkuang/triplelens", - "avatar": "https://avatars.githubusercontent.com/u/40119865?v=4", - "description": "Calculating light curves for triple microlensing systems", - "topics": [] + "uid": "github/mrc-ide/odin", + "url": "https://github.com/mrc-ide/odin", + "rel": "/software/repository/github/mrc-ide/odin", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "\u16a9 A DSL for describing and solving differential equations in R", + "topics": [ + "infrastructure" + ] }, { - "uid": "github/kblin/ncbi-acc-download", - "url": "https://github.com/kblin/ncbi-acc-download", - "rel": "/software/repository/github/kblin/ncbi-acc-download", - "avatar": "https://avatars.githubusercontent.com/u/76448?v=4", - "description": "Download files from NCBI Entrez by accession", + "uid": "github/mrc-ide/PlasmoMAPI", + "url": "https://github.com/mrc-ide/PlasmoMAPI", + "rel": "/software/repository/github/mrc-ide/PlasmoMAPI", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "Mapping Plasmodium Spatial Connectivity from Genetic Data", "topics": [] }, { - "uid": "github/joshjchayes/TransitFit", - "url": "https://github.com/joshjchayes/TransitFit", - "rel": "/software/repository/github/joshjchayes/TransitFit", - "avatar": "https://avatars.githubusercontent.com/u/29756283?v=4", - "description": "Transit light curve fitting using nested sampling", + "uid": "github/mrc-ide/individual", + "url": "https://github.com/mrc-ide/individual", + "rel": "/software/repository/github/mrc-ide/individual", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "R Package for individual based epidemiological models", + "topics": [ + "r", + "r-package", + "rstats", + "epidemiology", + "agent-based-modeling", + "individual-based-modelling", + "infectious-diseases" + ] + }, + { + "uid": "github/mrc-ide/covid-sim", + "url": "https://github.com/mrc-ide/covid-sim", + "rel": "/software/repository/github/mrc-ide/covid-sim", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "This is the COVID-19 CovidSim microsimulation model developed by the MRC Centre for Global Infectious Disease Analysis hosted at Imperial College, London.", "topics": [] }, { - "uid": "github/JesusTorrado/extrapops", - "url": "https://github.com/JesusTorrado/extrapops", - "rel": "/software/repository/github/JesusTorrado/extrapops", - "avatar": "https://avatars.githubusercontent.com/u/2233649?v=4", - "description": "extrapops: fast simulation and analysis of extra-galactic binary GW sources", - "topics": [ - "binary-black-holes", - "gravitational-waves" - ] + "uid": "github/mrc-ide/ring", + "url": "https://github.com/mrc-ide/ring", + "rel": "/software/repository/github/mrc-ide/ring", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": ":ring: Ring buffers", + "topics": [] }, { - "uid": "github/seshnadathur/Revolver", - "url": "https://github.com/seshnadathur/Revolver", - "rel": "/software/repository/github/seshnadathur/Revolver", - "avatar": "https://avatars.githubusercontent.com/u/39797132?v=4", - "description": "Real-space void locations from survey reconstruction", + "uid": "github/mrc-ide/squire", + "url": "https://github.com/mrc-ide/squire", + "rel": "/software/repository/github/mrc-ide/squire", + "avatar": "https://avatars.githubusercontent.com/u/25453642?v=4", + "description": "SEIR transmission model of COVID-19. Documentation at:", "topics": [] }, { - "uid": "github/conchoecia/pauvre", - "url": "https://github.com/conchoecia/pauvre", - "rel": "/software/repository/github/conchoecia/pauvre", - "avatar": "https://avatars.githubusercontent.com/u/3123273?v=4", - "description": "Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.", + "uid": "github/huanghua1994/HiGP", + "url": "https://github.com/huanghua1994/HiGP", + "rel": "/software/repository/github/huanghua1994/HiGP", + "avatar": "https://avatars.githubusercontent.com/u/22476972?v=4", + "description": null, "topics": [] }, { - "uid": "github/MrMinimal64/multivar_horner", - "url": "https://github.com/MrMinimal64/multivar_horner", - "rel": "/software/repository/github/MrMinimal64/multivar_horner", - "avatar": "https://avatars3.githubusercontent.com/u/15111305?v=4", - "description": "python package implementing a multivariate Horner scheme for efficiently evaluating multivariate polynomials ", - "topics": [ - "math", - "mathematics", - "polynomials", - "horner-scheme", - "multivariate", - "multivariate-polynomials", - "hornerscheme-solver", - "horner", - "python", - "python3", - "factorization", - "polynomial", - "polynomial-evaluation", - "evaluation" - ] + "uid": "github/ByrumLab/proteoDA", + "url": "https://github.com/ByrumLab/proteoDA", + "rel": "/software/repository/github/ByrumLab/proteoDA", + "avatar": "https://avatars.githubusercontent.com/u/55756150?v=4", + "description": null, + "topics": [] }, { - "uid": "github/zhouzilu/DENDRO", - "url": "https://github.com/zhouzilu/DENDRO", - "rel": "/software/repository/github/zhouzilu/DENDRO", - "avatar": "https://avatars.githubusercontent.com/u/26659843?v=4", - "description": "Genetic Heterogeneity Profiling by Single Cell RNA Sequencing ", - "topics": [ - "single-cell", - "tumor-heterogeneity", - "statistics", - "computational-biology", - "bioinformatics" - ] + "uid": "github/nkhorshid/simab", + "url": "https://github.com/nkhorshid/SimAb", + "rel": "/software/repository/github/nkhorshid/simab", + "avatar": "https://avatars.githubusercontent.com/u/43376977?v=4", + "description": "Planet formation model", + "topics": [] }, { - "uid": "github/QuantumPlasma/SFQEDtoolkit", - "url": "https://github.com/QuantumPlasma/SFQEDtoolkit", - "rel": "/software/repository/github/QuantumPlasma/SFQEDtoolkit", - "avatar": "https://avatars.githubusercontent.com/u/100681113?v=4", - "description": null, + "uid": "github/alphapsa/PIPE", + "url": "https://github.com/alphapsa/PIPE", + "rel": "/software/repository/github/alphapsa/PIPE", + "avatar": "https://avatars.githubusercontent.com/u/13644798?v=4", + "description": "PSF Imagette Photometric Extraction - PSF photometry for CHEOPS data", "topics": [] }, { - "uid": "github/stemangiola/tidyHeatmap", - "url": "https://github.com/stemangiola/tidyHeatmap", - "rel": "/software/repository/github/stemangiola/tidyHeatmap", - "avatar": "https://avatars2.githubusercontent.com/u/7232890?v=4", - "description": "Draw heatmap simply using a tidy data frame", - "topics": [ - "heatmap", - "tidyverse", - "r", - "rstudio", - "tidy", - "plotting", - "tidy-data-frame", - "graphviz", - "complexheatmap", - "brewer", - "viridis", - "scale", - "mtcars", - "dplyr", - "custom-palette", - "tidybulk", - "tibble" - ] + "uid": "github/antismash/antismash", + "url": "https://github.com/antismash/antismash", + "rel": "/software/repository/github/antismash/antismash", + "avatar": "https://avatars.githubusercontent.com/u/17174811?v=4", + "description": "antiSMASH", + "topics": [] }, { - "uid": "github/chhylp123/hifiasm", - "url": "https://github.com/chhylp123/hifiasm", - "rel": "/software/repository/github/chhylp123/hifiasm", - "avatar": "https://avatars.githubusercontent.com/u/11708053?v=4", - "description": "Hifiasm: a haplotype-resolved assembler for accurate Hifi reads ", - "topics": [ - "bioinformatics", - "denovo-assembly", - "genomics", - "hifi-read", - "pacbio" - ] + "uid": "github/haowang-astro/jetsimpy", + "url": "https://github.com/haowang-astro/jetsimpy", + "rel": "/software/repository/github/haowang-astro/jetsimpy", + "avatar": "https://avatars.githubusercontent.com/u/144850029?v=4", + "description": "A hydrodynamic model of gamma-ray burst jet and afterglow", + "topics": [] }, { - "uid": "github/SandoghdarLab/PiSCAT", - "url": "https://github.com/SandoghdarLab/PiSCAT", - "rel": "/software/repository/github/SandoghdarLab/PiSCAT", - "avatar": "https://avatars.githubusercontent.com/u/77978055?v=4", - "description": "PiSCAT is a python-based package with a graphical user interface for performing high-performance analysis on a variety of iSCAT measurements.", + "uid": "github/tkonolige/city2ba", + "url": "https://github.com/tkonolige/city2ba", + "rel": "/software/repository/github/tkonolige/city2ba", + "avatar": "https://avatars.githubusercontent.com/u/1501680?v=4", + "description": "Tools for generating synthetic bundle adjustment datasets", "topics": [ - "python", - "data-analysis", - "microscopy-images", - "nano-particles" + "bundle-adjustment" ] }, { - "uid": "github/mildpiggy/DEP2", - "url": "https://github.com/mildpiggy/DEP2", - "rel": "/software/repository/github/mildpiggy/DEP2", - "avatar": "https://avatars.githubusercontent.com/u/37103678?v=4", - "description": "An r package for proteomics data Analysis, developed from DEP.", + "uid": "github/tylertrimble/viswaternet", + "url": "https://github.com/tylertrimble/viswaternet", + "rel": "/software/repository/github/tylertrimble/viswaternet", + "avatar": "https://avatars.githubusercontent.com/u/102005076?v=4", + "description": "A Python package for easy generation and customization of water distribution network visualizations.", "topics": [] }, { - "uid": "github/domenico-simone/rmlst_api", - "url": "https://github.com/domenico-simone/rmlst_api", - "rel": "/software/repository/github/domenico-simone/rmlst_api", - "avatar": "https://avatars.githubusercontent.com/u/11278300?v=4", - "description": "Run rmlst API through python script", + "uid": "github/bluenote-1577/fairy", + "url": "https://github.com/bluenote-1577/fairy", + "rel": "/software/repository/github/bluenote-1577/fairy", + "avatar": "https://avatars.githubusercontent.com/u/12787948?v=4", + "description": "alignment-free coverage calculation for metagenomic binning >100 times faster ", "topics": [] }, { - "uid": "github/DeepRegNet/DeepReg", - "url": "https://github.com/DeepRegNet/DeepReg", - "rel": "/software/repository/github/DeepRegNet/DeepReg", - "avatar": "https://avatars2.githubusercontent.com/u/68382534?v=4", - "description": "Medical image registration using deep learning", + "uid": "github/bluenote-1577/sylph", + "url": "https://github.com/bluenote-1577/sylph", + "rel": "/software/repository/github/bluenote-1577/sylph", + "avatar": "https://avatars.githubusercontent.com/u/12787948?v=4", + "description": "ultrafast ANI querying and taxonomic profiling for metagenomic shotgun samples by abundance-corrected minhash.", "topics": [ - "image-registration", - "medical-image-registration", - "image-fusion", - "deep-learning", - "deep-neural-networks", - "neural-network", - "convolutional-neural-networks", - "tensorflow2", - "deepreg" + "average-nucleotide-identity", + "k-mer", + "metagenomics", + "sketching-algorithm", + "taxonomic-classification" ] }, { - "uid": "github/shenwei356/LexicMap", - "url": "https://github.com/shenwei356/LexicMap", - "rel": "/software/repository/github/shenwei356/LexicMap", - "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", - "description": "LexicMap: efficient sequence alignment against millions of prokaryotic genomes", + "uid": "github/neuroneural/brainchop", + "url": "https://github.com/neuroneural/brainchop", + "rel": "/software/repository/github/neuroneural/brainchop", + "avatar": "https://avatars.githubusercontent.com/u/77679632?v=4", + "description": "Brainchop: In-browser 3D MRI rendering and segmentation", "topics": [ - "prokaryotic-genomes", - "sequence-alignment", - "sequence-search", - "alignment", - "large-scale-dataset", - "microbial-genomes", - "bacterial-database", - "bacterial-genomes", - "lexichash" + "deep-learning", + "3d-segmentation", + "frontend-app", + "javascript", + "neuroimaging", + "pyodide", + "tensorflowjs", + "three-js", + "medical-imaging", + "mri", + "mri-segmentation" ] }, { - "uid": "github/shenwei356/kmcp", - "url": "https://github.com/shenwei356/kmcp", - "rel": "/software/repository/github/shenwei356/kmcp", - "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", - "description": "Accurate metagenomic profiling && Fast large-scale sequence/genome searching", + "uid": "github/sidiwang/snSMART", + "url": "https://github.com/sidiwang/snSMART", + "rel": "/software/repository/github/sidiwang/snSMART", + "avatar": "https://avatars.githubusercontent.com/u/56009989?v=4", + "description": "small n sequential multiple assignment randomized trial (snSMART)", "topics": [ - "kmer", - "sketch", - "searching", - "metagenomics", - "taxonomic-classification", - "taxonomic-profiling", - "scaled-minhash", - "syncmers", - "cobs", - "sketching", - "bigsi", - "fracminhash", - "virome" + "bayesian-analysis", + "clinical-trials", + "r", + "rare-disease", + "small-sample" ] }, { - "uid": "github/shenwei356/seqkit", - "url": "https://github.com/shenwei356/seqkit", - "rel": "/software/repository/github/shenwei356/seqkit", - "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", - "description": "A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang", - "topics": [ - "bioinformatics", - "cross-platform", - "fasta", - "golang", - "sequence", - "toolkit", - "fastq", - "tool", - "manipulation" - ] + "uid": "github/fatmasevinck/enetLTS", + "url": "https://github.com/fatmasevinck/enetLTS", + "rel": "/software/repository/github/fatmasevinck/enetLTS", + "avatar": "https://avatars.githubusercontent.com/u/98884658?v=4", + "description": "Robust and sparse methods for high diemnsional data including gaussian, binomial and multinomial families", + "topics": [] }, { - "uid": "github/shenwei356/csvtk", - "url": "https://github.com/shenwei356/csvtk", - "rel": "/software/repository/github/shenwei356/csvtk", - "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", - "description": "a set of tools for manipulation of CSV/TSV files. It is convenient for rapid data investigation and integration into analysis pipelines.", - "topics": [ - "csv", - "tsv", - "cross-platform", - "golang", - "toolkit", - "bioinformatics", - "command-line", - "tool" - ] + "uid": "github/haoharryfeng/NeuCA", + "url": "https://github.com/haoharryfeng/NeuCA", + "rel": "/software/repository/github/haoharryfeng/NeuCA", + "avatar": "https://avatars.githubusercontent.com/u/25249792?v=4", + "description": "Neural-network based Cell Annotation tool", + "topics": [] }, { - "uid": "github/shenwei356/unikmer", - "url": "https://github.com/shenwei356/unikmer", - "rel": "/software/repository/github/shenwei356/unikmer", - "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", - "description": "Toolkit for k-mer with taxonomic information", + "uid": "github/psi4/psi4", + "url": "https://github.com/psi4/psi4", + "rel": "/software/repository/github/psi4/psi4", + "avatar": "https://avatars.githubusercontent.com/u/2636883?v=4", + "description": "Open-Source Quantum Chemistry \u2013 an electronic structure package in C++ driven by Python", "topics": [ - "kmer", - "golang", - "unique", - "union", - "intersection", - "difference", - "unik", - "k-mer", - "set" + "quantum-chemistry", + "c-plus-plus", + "python", + "computational-chemistry", + "chemistry", + "physics" ] }, { - "uid": "github/radio1988/OneStopRNAseq", - "url": "https://github.com/radio1988/OneStopRNAseq", - "rel": "/software/repository/github/radio1988/OneStopRNAseq", - "avatar": "https://avatars.githubusercontent.com/u/11168803?v=4", - "description": null, + "uid": "github/exoml/plan-net", + "url": "https://github.com/exoml/plan-net", + "rel": "/software/repository/github/exoml/plan-net", + "avatar": "https://avatars.githubusercontent.com/u/47813244?v=4", + "description": "An Ensemble of Bayesian Neural Networks for Exoplanetary Atmospheric Retrieval", "topics": [] }, { - "uid": "github/davidpagnon/Sports2D", - "url": "https://github.com/davidpagnon/Sports2D", - "rel": "/software/repository/github/davidpagnon/Sports2D", - "avatar": "https://avatars.githubusercontent.com/u/54667644?v=4", - "description": "Compute 2D human pose and angles from a video or a webcam. ", + "uid": "github/gerddie/maxflow", + "url": "https://github.com/gerddie/maxflow", + "rel": "/software/repository/github/gerddie/maxflow", + "avatar": "https://avatars.githubusercontent.com/u/2786969?v=4", + "description": "A library that implements the maxflow-mincut algorithm. ", + "topics": [] + }, + { + "uid": "github/GrainLearning/grainLearning", + "url": "https://github.com/GrainLearning/grainLearning", + "rel": "/software/repository/github/GrainLearning/grainLearning", + "avatar": "https://avatars.githubusercontent.com/u/100259686?v=4", + "description": "A Bayesian uncertainty quantification toolbox for discrete and continuum numerical models of granular materials, developed by various projects of the University of Twente (NL), the Netherlands eScience Center (NL), University of Newcastle (AU), and Hiroshima University (JP).", "topics": [ - "biomechanics", - "blazepose", - "joint-angles", - "kinematics", - "markerless", - "openpose", - "sports-analytics", - "kinovea", - "pose-estimation", - "rtmpose" + "bayesian-inference", + "low-discrepancy-sequences", + "mixture-models", + "parameter-identification", + "sequential-monte-carlo", + "uncertainty-quantification" ] }, { - "uid": "github/1054/Crab.Toolkit.michi2", - "url": "https://github.com/1054/Crab.Toolkit.michi2", - "rel": "/software/repository/github/1054/Crab.Toolkit.michi2", - "avatar": "https://avatars.githubusercontent.com/u/6521499?v=4", - "description": "crab minimum chi2 toolkit", + "uid": "github/ajshajib/dolphin", + "url": "https://github.com/ajshajib/dolphin", + "rel": "/software/repository/github/ajshajib/dolphin", + "avatar": "https://avatars.githubusercontent.com/u/20169048?v=4", + "description": "Automated pipeline for lens modelling based on lenstronomy.", "topics": [] }, { - "uid": "github/MingBit/PySCNet", - "url": "https://github.com/MingBit/PySCNet", - "rel": "/software/repository/github/MingBit/PySCNet", - "avatar": "https://avatars.githubusercontent.com/u/22442392?v=4", - "description": "A python package for single cell network analysis", - "topics": [ - "single-cell", - "network-analysis", - "docker" - ] + "uid": "github/ajshajib/LensingETC", + "url": "https://github.com/ajshajib/LensingETC", + "rel": "/software/repository/github/ajshajib/LensingETC", + "avatar": "https://avatars.githubusercontent.com/u/20169048?v=4", + "description": "Lensing Exposure Time Calculator", + "topics": [] }, { - "uid": "github/trchudley/pdemtools", - "url": "https://github.com/trchudley/pdemtools", - "rel": "/software/repository/github/trchudley/pdemtools", - "avatar": "https://avatars.githubusercontent.com/u/24896931?v=4", - "description": "Conveniently search, download, and process ArcticDEM and REMA products", + "uid": "github/RiccardoBiondi/segmentation", + "url": "https://github.com/RiccardoBiondi/segmentation", + "rel": "/software/repository/github/RiccardoBiondi/segmentation", + "avatar": "https://avatars.githubusercontent.com/u/48323959?v=4", + "description": "COVID-19 Lung Segmentation", "topics": [ - "coregistration", - "dem", - "digital-elevation-model", - "geospatial", - "glaciers", - "python", - "rema", - "terrain-analysis", - "arcticdem", - "polar-geospatial-center", - "glaciology" + "ct-images", + "lung-regions", + "covid-19", + "segmentation" ] }, { - "uid": "github/nedRad88/SCALAR", - "url": "https://github.com/nedRad88/SCALAR", - "rel": "/software/repository/github/nedRad88/SCALAR", - "avatar": "https://avatars0.githubusercontent.com/u/12820298?v=4", - "description": "SCALAR - Streaming ChALlenge plAtfoRm", + "uid": "github/ELELAB/RosettaDDGPrediction", + "url": "https://github.com/ELELAB/RosettaDDGPrediction", + "rel": "/software/repository/github/ELELAB/RosettaDDGPrediction", + "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", + "description": null, "topics": [] }, { - "uid": "github/hongli-ma/RNANetMotif", - "url": "https://github.com/hongli-ma/RNANetMotif", - "rel": "/software/repository/github/hongli-ma/RNANetMotif", - "avatar": "https://avatars.githubusercontent.com/u/42988626?v=4", - "description": "RNA structural motif finder", + "uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", + "url": "https://github.com/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", + "rel": "/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", + "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", + "description": "The Cancer bioMarker Prediction Pipeline (CAMPP) ", "topics": [] }, { - "uid": "github/Jashcraf/katsu", - "url": "https://github.com/Jashcraf/katsu", - "rel": "/software/repository/github/Jashcraf/katsu", - "avatar": "https://avatars.githubusercontent.com/u/25557892?v=4", - "description": "Polarimetric Data Reduction and machine control for measuring the polarization of observatories", + "uid": "github/ELELAB/LipidDyn", + "url": "https://github.com/ELELAB/LipidDyn", + "rel": "/software/repository/github/ELELAB/LipidDyn", + "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", + "description": "repository associated to our pipeline for lipid dynamics", "topics": [] }, { - "uid": "github/Jashcraf/poke", - "url": "https://github.com/Jashcraf/poke", - "rel": "/software/repository/github/Jashcraf/poke", - "avatar": "https://avatars.githubusercontent.com/u/25557892?v=4", - "description": "Poke (pronounced poh-keh) is a Polarization Ray Tracing and Gaussian Beamlet module for Python", + "uid": "github/ELELAB/cancermuts", + "url": "https://github.com/ELELAB/cancermuts", + "rel": "/software/repository/github/ELELAB/cancermuts", + "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", + "description": "Software for the automatic annotation of cancer mutations", "topics": [] }, { - "uid": "github/aris-mav/NMRInversions.jl", - "url": "https://github.com/aris-mav/NMRInversions.jl", - "rel": "/software/repository/github/aris-mav/NMRInversions.jl", - "avatar": "https://avatars.githubusercontent.com/u/116081909?v=4", - "description": "Numerical inversions for Nuclear Magnetic Resonance relaxation and diffusion experiments. Click on the link below for the full documentation.", - "topics": [ - "inverse-problems", - "nmr", - "nmr-relaxation", - "nmr-diffusion" - ] - }, - { - "uid": "github/xenon-middleware/xenon", - "url": "https://github.com/xenon-middleware/xenon", - "rel": "/software/repository/github/xenon-middleware/xenon", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "A middleware abstraction library that provides a simple programming interface to various compute and storage resources.", - "topics": [ - "java", - "batch-job", - "middleware", - "library" - ] + "uid": "github/kmkuesters/pooledpeaks", + "url": "https://github.com/kmkuesters/pooledpeaks", + "rel": "/software/repository/github/kmkuesters/pooledpeaks", + "avatar": "https://avatars.githubusercontent.com/u/75321402?v=4", + "description": "The Pooled Peaks Package Developed by the Blanton Lab as part of Kathleen Kuesters' Dissertation", + "topics": [] }, { - "uid": "github/xenon-middleware/pyxenon", - "url": "https://github.com/xenon-middleware/pyxenon", - "rel": "/software/repository/github/xenon-middleware/pyxenon", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "Python bindings for the Xenon API", + "uid": "github/jianlin-cheng/DRCon", + "url": "https://github.com/jianlin-cheng/DRCon", + "rel": "/software/repository/github/jianlin-cheng/DRCon", + "avatar": "https://avatars.githubusercontent.com/u/20481009?v=4", + "description": "Deep dilated convolutional residual neural network for predicting interchain contacts of protein homodimers", "topics": [] }, { - "uid": "github/cosmostat/nicaea", - "url": "https://github.com/CosmoStat/nicaea", - "rel": "/software/repository/github/cosmostat/nicaea", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Numerical routines to calculate cosmology and weak-lensing quantities.", + "uid": "github/OpenHPS/openhps-core", + "url": "https://github.com/OpenHPS/openhps-core", + "rel": "/software/repository/github/OpenHPS/openhps-core", + "avatar": "https://avatars.githubusercontent.com/u/64551958?v=4", + "description": "OpenHPS: Core Component", "topics": [] }, { - "uid": "github/cosmostat/CosmoPMC", - "url": "https://github.com/CosmoStat/CosmoPMC", - "rel": "/software/repository/github/cosmostat/CosmoPMC", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Cosmology sampling with Population Monte Carlo (PMC)", - "topics": [] + "uid": "github/miriamkw/GluPredKit", + "url": "https://github.com/miriamkw/GluPredKit", + "rel": "/software/repository/github/miriamkw/GluPredKit", + "avatar": "https://avatars.githubusercontent.com/u/47831805?v=4", + "description": "GluPredKit aims to make blood glucose model training and prediction more accessible. ", + "topics": [ + "glucose-prediction", + "deep-learning", + "machine-learning", + "modelling-biological-systems" + ] }, { - "uid": "github/cosmostat/pmclib", - "url": "https://github.com/CosmoStat/pmclib", - "rel": "/software/repository/github/cosmostat/pmclib", - "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", - "description": "Population Monte Carlo (PMC) library", + "uid": "github/ahmedmoustafa/JAligner", + "url": "https://github.com/ahmedmoustafa/JAligner", + "rel": "/software/repository/github/ahmedmoustafa/JAligner", + "avatar": "https://avatars.githubusercontent.com/u/958957?v=4", + "description": "Biological Sequence Alignment", "topics": [] }, { - "uid": "github/arumugamlab/msamtools", - "url": "https://github.com/arumugamlab/msamtools", - "rel": "/software/repository/github/arumugamlab/msamtools", - "avatar": "https://avatars.githubusercontent.com/u/56064268?v=4", - "description": "Metagenomics-related extended functionalities to samtools", - "topics": [] + "uid": "github/MedMaxLab/selfEEG", + "url": "https://github.com/MedMaxLab/selfEEG", + "rel": "/software/repository/github/MedMaxLab/selfEEG", + "avatar": "https://avatars.githubusercontent.com/u/119063619?v=4", + "description": "selfEEG: a Python library for Self-Supervised Learning on Electroencephalography (EEG) data", + "topics": [ + "deep-learning", + "eeg", + "self-supervised-learning" + ] }, { - "uid": "github/cvs-health/langfair", - "url": "https://github.com/cvs-health/langfair", - "rel": "/software/repository/github/cvs-health/langfair", - "avatar": "https://avatars.githubusercontent.com/u/89528242?v=4", - "description": "LangFair is a Python library for conducting use-case level LLM bias and fairness assessments", + "uid": "github/malonge/RagTag", + "url": "https://github.com/malonge/RagTag", + "rel": "/software/repository/github/malonge/RagTag", + "avatar": "https://avatars.githubusercontent.com/u/10554710?v=4", + "description": "Tools for fast and flexible genome assembly scaffolding and improvement", "topics": [ - "ai", - "artificial-intelligence", - "bias", - "bias-detection", - "ethical-ai", - "fairness", - "fairness-ai", - "fairness-ml", - "fairness-testing", - "large-language-models", - "llm", - "responsible-ai", - "python", - "ai-safety", - "llm-evaluation", - "llm-evaluation-framework", - "llm-evaluation-metrics" + "genome-assembly", + "scaffolding", + "gap-filling" ] }, { - "uid": "github/EISy-as-Py/hardy", - "url": "https://github.com/EISy-as-Py/hardy", - "rel": "/software/repository/github/EISy-as-Py/hardy", - "avatar": "https://avatars.githubusercontent.com/u/60707649?v=4", - "description": "Handling Arbitrary Recognition of Data! y not?", - "topics": [] + "uid": "github/niess/calzone", + "url": "https://github.com/niess/calzone", + "rel": "/software/repository/github/niess/calzone", + "avatar": "https://avatars.githubusercontent.com/u/11327514?v=4", + "description": "A Geant4 Python wrapper for the simulation of outdoor particle detectors", + "topics": [ + "geant4", + "monte-carlo", + "python" + ] }, { - "uid": "github/madysonb/EVA", - "url": "https://github.com/madysonb/EVA", - "rel": "/software/repository/github/madysonb/EVA", - "avatar": "https://avatars.githubusercontent.com/u/54335494?v=4", - "description": "Calculate group age using Gaia excess uncertainties", + "uid": "github/LiesaSalzer/MobilityTransformR", + "url": "https://github.com/LiesaSalzer/MobilityTransformR", + "rel": "/software/repository/github/LiesaSalzer/MobilityTransformR", + "avatar": "https://avatars.githubusercontent.com/u/61467853?v=4", + "description": "Effective mobility Transformation for CE-MS data ", "topics": [] }, { - "uid": "github/tlverse/hal9001", - "url": "https://github.com/tlverse/hal9001", - "rel": "/software/repository/github/tlverse/hal9001", - "avatar": "https://avatars0.githubusercontent.com/u/36939258?v=4", - "description": "\ud83e\udd20 \ud83d\udcff The Highly Adaptive Lasso", + "uid": "github/gully/blase", + "url": "https://github.com/gully/blase", + "rel": "/software/repository/github/gully/blase", + "avatar": "https://avatars.githubusercontent.com/u/860227?v=4", + "description": "Interpretable Machine Learning for astronomical spectroscopy in PyTorch and JAX", "topics": [ - "machine-learning-algorithms", - "nonparametric-regression", - "cross-validation", - "lasso-regression" + "astronomy", + "interpretable-machine-learning", + "machine-learning", + "spectroscopy" ] }, { - "uid": "github/yongsukyee/uncertain_blackholemass", - "url": "https://github.com/yongsukyee/uncertain_blackholemass", - "rel": "/software/repository/github/yongsukyee/uncertain_blackholemass", - "avatar": "https://avatars.githubusercontent.com/u/11021594?v=4", - "description": "Uncertainty quantification of black hole mass estimation", + "uid": "github/aqlaboratory/openfold", + "url": "https://github.com/aqlaboratory/openfold", + "rel": "/software/repository/github/aqlaboratory/openfold", + "avatar": "https://avatars.githubusercontent.com/u/8396911?v=4", + "description": "Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2", "topics": [ - "agn", - "black-hole", - "conformal-prediction", - "neural-networks", - "prediction", - "prediction-intervals", "pytorch", - "quasar", - "uncertainty-quantification" - ] - }, - { - "uid": "github/pyplati/platipy", - "url": "https://github.com/pyplati/platipy", - "rel": "/software/repository/github/pyplati/platipy", - "avatar": "https://avatars.githubusercontent.com/u/71683675?v=4", - "description": "Processing Library and Analysis Toolkit for Medical Imaging in Python", - "topics": [ - "image-analysis", - "medical-imaging", - "python", - "registration", - "segmentation", - "visualization" + "protein-structure", + "alphafold2" ] }, { - "uid": "github/theLongLab/CATE", - "url": "https://github.com/theLongLab/CATE", - "rel": "/software/repository/github/theLongLab/CATE", - "avatar": "https://avatars.githubusercontent.com/u/37426791?v=4", - "description": "A fast and scalable CUDA implementation to conduct highly parallelized evolutionary tests on large scale genomic data.", + "uid": "github/ranocha/SummationByPartsOperators.jl", + "url": "https://github.com/ranocha/SummationByPartsOperators.jl", + "rel": "/software/repository/github/ranocha/SummationByPartsOperators.jl", + "avatar": "https://avatars.githubusercontent.com/u/12693098?v=4", + "description": "A Julia library of summation-by-parts (SBP) operators used in finite difference, Fourier pseudospectral, continuous Galerkin, and discontinuous Galerkin methods to get provably stable semidiscretizations, paying special attention to boundary conditions.", "topics": [ - "1000genomes", - "cuda", - "cuda-programming", - "evolutionary-algorithms", - "evolutionary-biology", - "evolutionary-computation", - "genetic-algorithm", - "genetics", - "neutrality-test", - "vcf", - "vcf-data", - "vcf-files", - "cuda-toolkit", - "ehh", - "extended-haplotype-homozygosity", - "mk-test", - "neutrality", - "tajima" + "finite-difference", + "summation-by-parts", + "sbp", + "boundary-conditions", + "julia", + "hacktoberfest", + "discontinuous-galerkin", + "continuous-galerkin", + "fourier", + "derivative-operator", + "dgsem", + "cgsem" ] }, { - "uid": "github/exoml/plan-net", - "url": "https://github.com/exoml/plan-net", - "rel": "/software/repository/github/exoml/plan-net", - "avatar": "https://avatars.githubusercontent.com/u/47813244?v=4", - "description": "An Ensemble of Bayesian Neural Networks for Exoplanetary Atmospheric Retrieval", + "uid": "github/reggiebernardo/PTAfast", + "url": "https://github.com/reggiebernardo/PTAfast", + "rel": "/software/repository/github/reggiebernardo/PTAfast", + "avatar": "https://avatars.githubusercontent.com/u/44859376?v=4", + "description": "Fast code for PTA correlations from SGWB", "topics": [] }, { - "uid": "github/xCDAT/xcdat", - "url": "https://github.com/xCDAT/xcdat", - "rel": "/software/repository/github/xCDAT/xcdat", - "avatar": "https://avatars.githubusercontent.com/u/87787695?v=4", - "description": "An extension of xarray for climate data analysis on structured grids.", + "uid": "github/mdshw5/pyfaidx", + "url": "https://github.com/mdshw5/pyfaidx", + "rel": "/software/repository/github/mdshw5/pyfaidx", + "avatar": "https://avatars.githubusercontent.com/u/819554?v=4", + "description": "Efficient pythonic random access to fasta subsequences", "topics": [ - "climate-data-analysis", - "xarray", - "climate-science", "python", - "climate-data", - "cdat", - "xcdat", - "climate-research", - "climate-analysis", - "climate-sciences", - "cf-conventions", - "cmip", - "cmip6", - "e3sm", - "pcmdi" + "bioinformatics", + "fasta", + "indexing", + "dna", + "protein", + "genomics", + "bgzf", + "samtools" ] }, { - "uid": "github/jkbonfield/io_lib", - "url": "https://github.com/jkbonfield/io_lib", - "rel": "/software/repository/github/jkbonfield/io_lib", - "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", - "description": "Staden Package \"io_lib\" (sometimes referred to as libstaden-read by distributions). This contains code for reading and writing a variety of Bioinformatics / DNA Sequence formats.", + "uid": "github/rezeebe/orbitN", + "url": "https://github.com/rezeebe/orbitN", + "rel": "/software/repository/github/rezeebe/orbitN", + "avatar": "https://avatars.githubusercontent.com/u/89117187?v=4", + "description": "Symplectic integrator for near-Keplerian planetary systems", "topics": [] }, { - "uid": "github/jkbonfield/crumble", - "url": "https://github.com/jkbonfield/crumble", - "rel": "/software/repository/github/jkbonfield/crumble", - "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", - "description": "controllable lossy compression of BAM/CRAM files.", + "uid": "github/pilon/wiki", + "url": null, + "rel": "/software/repository/github/pilon/wiki", + "avatar": "", + "description": "Pilon is a software tool which can be used to automatically improve draft assemblies and find variation among strains, including large event detection.", "topics": [] }, { - "uid": "github/jkbonfield/htscodecs", - "url": "https://github.com/jkbonfield/htscodecs", - "rel": "/software/repository/github/jkbonfield/htscodecs", - "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", - "description": "Custom compression for CRAM and others.", + "uid": "github/masoncarney/stepped_luneburg", + "url": "https://github.com/masoncarney/stepped_luneburg", + "rel": "/software/repository/github/masoncarney/stepped_luneburg", + "avatar": "https://avatars.githubusercontent.com/u/39119090?v=4", + "description": "Modeling of a stepped Luneburg lens for all-sky surveys", "topics": [] }, { - "uid": "github/dsavransky/EXOSIMS", - "url": "https://github.com/dsavransky/EXOSIMS", - "rel": "/software/repository/github/dsavransky/EXOSIMS", - "avatar": "https://avatars.githubusercontent.com/u/4950841?v=4", - "description": "Simulator for exoplanet direct imaging space missions", - "topics": [] + "uid": "github/pmlmodelling/nctoolkit", + "url": "https://github.com/pmlmodelling/nctoolkit", + "rel": "/software/repository/github/pmlmodelling/nctoolkit", + "avatar": "https://avatars.githubusercontent.com/u/72567641?v=4", + "description": "A Python package for netCDF analysis and post-processing", + "topics": [ + "cdo", + "python", + "netcdf" + ] }, { - "uid": "github/hydroframe/hf_hydrodata", - "url": "https://github.com/hydroframe/hf_hydrodata", - "rel": "/software/repository/github/hydroframe/hf_hydrodata", - "avatar": "https://avatars.githubusercontent.com/u/48289869?v=4", - "description": null, + "uid": "github/BarquistLab/mason_paper", + "url": "https://github.com/BarquistLab/mason_paper", + "rel": "/software/repository/github/BarquistLab/mason_paper", + "avatar": "https://avatars.githubusercontent.com/u/35298356?v=4", + "description": "Code and analysis for MASON paper", "topics": [] }, { - "uid": "github/hydroframe/subsettools", - "url": "https://github.com/hydroframe/subsettools", - "rel": "/software/repository/github/hydroframe/subsettools", - "avatar": "https://avatars.githubusercontent.com/u/48289869?v=4", - "description": "Subsetting tools and utilities for ParFlow hydrological modeling", + "uid": "github/epi2me-labs/mapula", + "url": "https://github.com/epi2me-labs/mapula", + "rel": "/software/repository/github/epi2me-labs/mapula", + "avatar": "https://avatars.githubusercontent.com/u/60506060?v=4", + "description": "Generate mapping stats at your chosen level of aggregation", "topics": [] }, { - "uid": "github/jorisparet/partycls", - "url": "https://github.com/jorisparet/partycls", - "rel": "/software/repository/github/jorisparet/partycls", - "avatar": "https://avatars.githubusercontent.com/u/57349320?v=4", - "description": "Unsupervised learning of structure in systems of interacting particles.", + "uid": "github/uab-cgds-worthey/quac", + "url": "https://github.com/uab-cgds-worthey/quac", + "rel": "/software/repository/github/uab-cgds-worthey/quac", + "avatar": "https://avatars.githubusercontent.com/u/110498780?v=4", + "description": "\ud83e\udd86 Quality Control of WGS and exome samples \ud83e\udd86", "topics": [ - "python", - "clustering", - "machine-learning", - "molecular-dynamics", - "physics" + "pipeline" ] }, { - "uid": "github/ajosephy/Clustering", - "url": "https://github.com/ajosephy/Clustering", - "rel": "/software/repository/github/ajosephy/Clustering", - "avatar": "https://avatars.githubusercontent.com/u/12819866?v=4", - "description": "Modified RRATrap + new DBSCAN codes to cluster single pulse events.", + "uid": "github/idptools/metapredict", + "url": "https://github.com/idptools/metapredict", + "rel": "/software/repository/github/idptools/metapredict", + "avatar": "https://avatars.githubusercontent.com/u/67078335?v=4", + "description": "A machine learning based protein disorder predictor.", "topics": [] }, { - "uid": "github/dianna-ai/dianna", - "url": "https://github.com/dianna-ai/dianna", - "rel": "/software/repository/github/dianna-ai/dianna", - "avatar": "https://avatars.githubusercontent.com/u/79975160?v=4", - "description": "Deep Insight And Neural Network Analysis", - "topics": [] + "uid": "github/tensorflow/tensorflow", + "url": "https://github.com/tensorflow/tensorflow", + "rel": "/software/repository/github/tensorflow/tensorflow", + "avatar": "https://avatars1.githubusercontent.com/u/15658638?v=4", + "description": "An Open Source Machine Learning Framework for Everyone", + "topics": [ + "tensorflow", + "machine-learning", + "python", + "deep-learning", + "deep-neural-networks", + "neural-network", + "ml", + "distributed" + ] }, { - "uid": "github/CoolWorlds/exoinformatics", - "url": "https://github.com/CoolWorlds/exoinformatics", - "rel": "/software/repository/github/CoolWorlds/exoinformatics", - "avatar": "https://avatars.githubusercontent.com/u/12749277?v=4", - "description": null, + "uid": "github/eucp-project/storyboards", + "url": "https://github.com/eucp-project/storyboards", + "rel": "/software/repository/github/eucp-project/storyboards", + "avatar": "https://avatars.githubusercontent.com/u/55438229?v=4", + "description": "Simple web application to show example use cases with some interactivity. (visitors via old url will be redirected to the website with new url)", "topics": [] }, { - "uid": "github/CoolWorlds/ExoPriors", - "url": "https://github.com/CoolWorlds/ExoPriors", - "rel": "/software/repository/github/CoolWorlds/ExoPriors", - "avatar": "https://avatars.githubusercontent.com/u/12749277?v=4", - "description": "Calculate log-likelihood penalties to account for observational bias in exoplanet detection.", + "uid": "github/eucp-project/atlas", + "url": "https://github.com/eucp-project/atlas", + "rel": "/software/repository/github/eucp-project/atlas", + "avatar": "https://avatars.githubusercontent.com/u/55438229?v=4", + "description": "prototype result browser", "topics": [] }, { - "uid": "github/BirkhoffG/jax-relax", - "url": "https://github.com/BirkhoffG/jax-relax", - "rel": "/software/repository/github/BirkhoffG/jax-relax", - "avatar": "https://avatars.githubusercontent.com/u/26811230?v=4", - "description": "Recourse Explanation Library in JAX", + "uid": "github/phelelani/nf-rnaSeqCount", + "url": "https://github.com/phelelani/nf-rnaSeqCount", + "rel": "/software/repository/github/phelelani/nf-rnaSeqCount", + "avatar": "https://avatars.githubusercontent.com/u/12947600?v=4", + "description": "Assembly and differential expression analysis", "topics": [] }, { - "uid": "github/exoclam/gaspery", - "url": "https://github.com/exoclam/gaspery", - "rel": "/software/repository/github/exoclam/gaspery", - "avatar": "https://avatars.githubusercontent.com/u/16911363?v=4", - "description": null, + "uid": "github/phelelani/nf-rnaSeqMetagen", + "url": "https://github.com/phelelani/nf-rnaSeqMetagen", + "rel": "/software/repository/github/phelelani/nf-rnaSeqMetagen", + "avatar": "https://avatars.githubusercontent.com/u/12947600?v=4", + "description": "Metagenomics pipeline", "topics": [] }, { - "uid": "github/Mulan-94/smops", - "url": "https://github.com/Mulan-94/smops", - "rel": "/software/repository/github/Mulan-94/smops", - "avatar": "https://avatars.githubusercontent.com/u/12611059?v=4", - "description": "Interpolate FITS model images over higher frequency intervals", + "uid": "github/pnsaevik/effluent", + "url": "https://github.com/pnsaevik/effluent", + "rel": "/software/repository/github/pnsaevik/effluent", + "avatar": "https://avatars.githubusercontent.com/u/12728107?v=4", + "description": null, "topics": [] }, { - "uid": "github/rgmyr/corebreakout", - "url": "https://github.com/rgmyr/corebreakout", - "rel": "/software/repository/github/rgmyr/corebreakout", - "avatar": "https://avatars1.githubusercontent.com/u/31017405?v=4", - "description": "Segmentation and depth-alignment of geological core sample image columns via Mask-RCNN", + "uid": "github/ExoSim/ExoSimPublic", + "url": "https://github.com/ExoSim/ExoSimPublic", + "rel": "/software/repository/github/ExoSim/ExoSimPublic", + "avatar": "https://avatars.githubusercontent.com/u/9990672?v=4", + "description": null, "topics": [] }, { - "uid": "github/mikaelLEROY/AxionNS_RayTracing", - "url": "https://github.com/mikaelLEROY/AxionNS_RayTracing", - "rel": "/software/repository/github/mikaelLEROY/AxionNS_RayTracing", - "avatar": "https://avatars.githubusercontent.com/u/31671771?v=4", - "description": null, + "uid": "github/benmontet/f3", + "url": "https://github.com/benmontet/f3", + "rel": "/software/repository/github/benmontet/f3", + "avatar": "https://avatars.githubusercontent.com/u/1314530?v=4", + "description": "Full Frame Fotometry from the Kepler Full Frame Images", "topics": [] }, { - "uid": "github/desmid/mview", - "url": "https://github.com/desmid/mview", - "rel": "/software/repository/github/desmid/mview", - "avatar": "https://avatars.githubusercontent.com/u/12565129?v=4", - "description": "MView extracts and reformats the results of a sequence database search or multiple alignment.", + "uid": "github/OpenMS/pyopenms-extra", + "url": "https://github.com/OpenMS/pyopenms-docs", + "rel": "/software/repository/github/OpenMS/pyopenms-extra", + "avatar": "https://avatars.githubusercontent.com/u/5994841?v=4", + "description": "pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.", "topics": [ - "bioinformatics", - "bioinformatics-tool", - "sequence-alignment-visualization", - "blast-search", - "blast", - "fasta", - "clustal" + "openms", + "python", + "ms-data", + "hacktoberfest", + "hacktoberfest2022" ] }, { - "uid": "github/matchms/matchms", - "url": "https://github.com/matchms/matchms", - "rel": "/software/repository/github/matchms/matchms", - "avatar": "https://avatars0.githubusercontent.com/u/62389017?v=4", - "description": "Python library for fuzzy comparison of mass spectrum data and other Python objects", + "uid": "github/OpenMS/OpenMS", + "url": "https://github.com/OpenMS/OpenMS", + "rel": "/software/repository/github/OpenMS/OpenMS", + "avatar": "https://avatars.githubusercontent.com/u/5994841?v=4", + "description": "The codebase of the OpenMS project", "topics": [ - "python3", - "similarity-measures", + "openms", + "c-plus-plus", + "ms-data", "mass-spectrometry", - "fuzzy-matching", - "fuzzy-search" + "linux", + "macos", + "windows", + "proteomics", + "analyses", + "algorithms", + "metabolomics", + "3-clause-bsd", + "hacktoberfest" ] }, - { - "uid": "github/matchms/ms2deepscore", - "url": "https://github.com/matchms/ms2deepscore", - "rel": "/software/repository/github/matchms/ms2deepscore", - "avatar": "https://avatars.githubusercontent.com/u/62389017?v=4", - "description": "Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity", - "topics": [] - }, - { - "uid": "github/hasindu2008/slow5tools", - "url": "https://github.com/hasindu2008/slow5tools", - "rel": "/software/repository/github/hasindu2008/slow5tools", - "avatar": "https://avatars.githubusercontent.com/u/12987163?v=4", - "description": "Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.", - "topics": [] - }, - { - "uid": "github/ryanoelkers/DIA", - "url": "https://github.com/ryanoelkers/DIA", - "rel": "/software/repository/github/ryanoelkers/DIA", - "avatar": "https://avatars.githubusercontent.com/u/18665480?v=4", - "description": "Difference Image Analysis for Wide-Field Surveys", - "topics": [] - }, - { - "uid": "github/chapmanb/bcbb", - "url": "https://github.com/chapmanb/bcbb", - "rel": "/software/repository/github/chapmanb/bcbb", - "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", - "description": "Incubator for useful bioinformatics code, primarily in Python and R", - "topics": [] - }, - { - "uid": "github/chapmanb/bcbio.variation", - "url": "https://github.com/chapmanb/bcbio.variation", - "rel": "/software/repository/github/chapmanb/bcbio.variation", - "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", - "description": "Toolkit to analyze genomic variation data, built on the GATK with Clojure", - "topics": [] - }, - { - "uid": "github/chapmanb/bcbio.prioritize", - "url": "https://github.com/chapmanb/bcbio.prioritize", - "rel": "/software/repository/github/chapmanb/bcbio.prioritize", - "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", - "description": "Prioritize small variants, structural variants and coverage based on biological inputs", + { + "uid": "github/trinotate/trinotatehub.io", + "url": null, + "rel": "/software/repository/github/trinotate/trinotatehub.io", + "avatar": "", + "description": "a comprehensive annotation suite designed for automatic functional annotation of transcriptomes, particularly de novo assembled transcriptomes, from model or non-model organisms.", "topics": [] }, { - "uid": "github/ORNL/tx2", - "url": "https://github.com/ORNL/tx2", - "rel": "/software/repository/github/ORNL/tx2", - "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", - "description": "Transformer eXplainability and eXploration", + "uid": "github/jiffyclub/palettable", + "url": "https://github.com/jiffyclub/palettable", + "rel": "/software/repository/github/jiffyclub/palettable", + "avatar": "https://avatars.githubusercontent.com/u/920492?v=4", + "description": "Color palettes for Python", "topics": [] }, { - "uid": "github/ORNL/icat", - "url": "https://github.com/ORNL/icat", - "rel": "/software/repository/github/ORNL/icat", - "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", - "description": "Interactive machine learning dashboard for textual data exploration", + "uid": "github/mdsteiner/EFAtools", + "url": "https://github.com/mdsteiner/EFAtools", + "rel": "/software/repository/github/mdsteiner/EFAtools", + "avatar": "https://avatars3.githubusercontent.com/u/26483702?v=4", + "description": null, "topics": [] }, { - "uid": "github/ORNL/Equilipy", - "url": "https://github.com/ORNL/Equilipy", - "rel": "/software/repository/github/ORNL/Equilipy", - "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", - "description": "Open-source python package for multicomponent multiphase equilibrium CALPHAD calculations", + "uid": "github/tuoyl/tat-pulsar", + "url": "https://github.com/tuoyl/tat-pulsar", + "rel": "/software/repository/github/tuoyl/tat-pulsar", + "avatar": "https://avatars.githubusercontent.com/u/9820896?v=4", + "description": "A Python based pulsar timing analysis tools (TAT).", "topics": [ - "calphad", - "python" + "pulsar", + "python", + "timing" ] }, { - "uid": "github/ORNL/curifactory", - "url": "https://github.com/ORNL/curifactory", - "rel": "/software/repository/github/ORNL/curifactory", - "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", - "description": "An experiment workflow and organization tool.", - "topics": [] + "uid": "github/gorpipe/gor", + "url": "https://github.com/gorpipe/gor", + "rel": "/software/repository/github/gorpipe/gor", + "avatar": "https://avatars.githubusercontent.com/u/60776787?v=4", + "description": "GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.", + "topics": [ + "genetics", + "genomics", + "gwas", + "bioinformatics", + "python", + "software", + "gor", + "gorpipe", + "vcf", + "spark", + "open-source", + "scala", + "java" + ] }, { - "uid": "github/ORNL/AdditiveFOAM", - "url": "https://github.com/ORNL/AdditiveFOAM", - "rel": "/software/repository/github/ORNL/AdditiveFOAM", - "avatar": "https://avatars.githubusercontent.com/u/5138006?v=4", - "description": "A continuum physics code for additive manufacturing built on OpenFOAM", + "uid": "github/QTC-UMD/rydiqule", + "url": "https://github.com/QTC-UMD/rydiqule", + "rel": "/software/repository/github/QTC-UMD/rydiqule", + "avatar": "https://avatars.githubusercontent.com/u/126897874?v=4", + "description": "Rydberg Sensor Interactive Quantum Physics Module", "topics": [ - "openfoam", - "additive-manufactering", - "fluid-flow", - "heat-transport", - "simulation-modeling" + "atomic-physics", + "atomic-sensors", + "electrometry", + "quantum-optics", + "rydberg" ] }, { - "uid": "github/xpsi-group/neost", - "url": "https://github.com/xpsi-group/neost", - "rel": "/software/repository/github/xpsi-group/neost", - "avatar": "https://avatars.githubusercontent.com/u/87758280?v=4", - "description": null, - "topics": [] + "uid": "github/natashabatalha/PandExo", + "url": "https://github.com/natashabatalha/PandExo", + "rel": "/software/repository/github/natashabatalha/PandExo", + "avatar": "https://avatars.githubusercontent.com/u/6554465?v=4", + "description": "A Community Tool for Transiting Exoplanet Science with the JWST & HST", + "topics": [ + "exoplanets", + "exoplanet-transits", + "jwst", + "spectroscopy", + "binning", + "stsci", + "hst", + "simulator", + "astronomy", + "astrophysics" + ] }, { - "uid": "github/xpsi-group/xpsi", - "url": "https://github.com/xpsi-group/xpsi", - "rel": "/software/repository/github/xpsi-group/xpsi", - "avatar": "https://avatars.githubusercontent.com/u/87758280?v=4", - "description": "X-PSI: X-ray Pulse Simulation and Inference", + "uid": "github/natashabatalha/picaso", + "url": "https://github.com/natashabatalha/picaso", + "rel": "/software/repository/github/natashabatalha/picaso", + "avatar": "https://avatars.githubusercontent.com/u/6554465?v=4", + "description": "A Planetary Intensity Code for Atmospheric Spectroscopy Observations", "topics": [ - "astrophysics", - "astronomy", - "astronomical-algorithms", - "astrophysical-simulation", - "sampling", - "parameter-estimation", - "statistics-modeling", - "modeling", - "likelihood-functions", - "posterior-sampling", - "x-ray-astronomy" + "exoplanets", + "atmospheric-science", + "planetary-science", + "scattering", + "atmospheres", + "direct-imaging", + "transmission", + "emission", + "reflected-light" ] }, { - "uid": "github/aimalz/qp", - "url": "https://github.com/aimalz/qp", - "rel": "/software/repository/github/aimalz/qp", - "avatar": "https://avatars.githubusercontent.com/u/8606810?v=4", - "description": "Quantile Parametrization for probability distribution functions module", + "uid": "github/rbrthogan/GAz", + "url": "https://github.com/rbrthogan/GAz", + "rel": "/software/repository/github/rbrthogan/GAz", + "avatar": "https://avatars.githubusercontent.com/u/9214671?v=4", + "description": "A genetic algorithm that finds optimal polynomial form to fit to data. ", "topics": [] }, { - "uid": "github/meerklass/MeerFish", - "url": "https://github.com/meerklass/MeerFish", - "rel": "/software/repository/github/meerklass/MeerFish", - "avatar": "https://avatars.githubusercontent.com/u/48520445?v=4", - "description": null, - "topics": [] + "uid": "github/IKNL/vantage6", + "url": "https://github.com/IKNL/vantage6", + "rel": "/software/repository/github/IKNL/vantage6", + "avatar": "https://avatars.githubusercontent.com/u/39300115?v=4", + "description": "Docker CLI package for the vantage6 infrastructure", + "topics": [ + "federated-learning", + "multi-party-computation", + "data-science", + "distributed-learning" + ] }, { - "uid": "github/jmiramont/mcsm-benchs", - "url": "https://github.com/jmiramont/mcsm-benchs", - "rel": "/software/repository/github/jmiramont/mcsm-benchs", - "avatar": "https://avatars.githubusercontent.com/u/62579770?v=4", - "description": "A toolbox that provides a common framework for benchmarks of multi-component signal processing methods.", - "topics": [] + "uid": "github/astro-group-bristol/Gradus.jl", + "url": "https://github.com/astro-group-bristol/Gradus.jl", + "rel": "/software/repository/github/astro-group-bristol/Gradus.jl", + "avatar": "https://avatars.githubusercontent.com/u/93991759?v=4", + "description": "Extensible spacetime agnostic general relativistic ray-tracing (GRRT).", + "topics": [ + "astrophysics", + "black-holes", + "general-relativity", + "julia", + "ray-tracing", + "physics", + "grrt", + "relativistic-ray-tracing", + "geodesic", + "raytracing", + "radiative-transfer" + ] }, { - "uid": "github/dwkim78/upsilon", - "url": "https://github.com/dwkim78/upsilon", - "rel": "/software/repository/github/dwkim78/upsilon", - "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", - "description": "Automated Classification of Periodic Variable Stars Using Machine Learning", + "uid": "github/vterron/lemon", + "url": "https://github.com/vterron/lemon", + "rel": "/software/repository/github/vterron/lemon", + "avatar": "https://avatars.githubusercontent.com/u/1575425?v=4", + "description": "Differential photometry for humans (and astronomers)", "topics": [] }, { - "uid": "github/dwkim78/ASTRiDE", - "url": "https://github.com/dwkim78/ASTRiDE", - "rel": "/software/repository/github/dwkim78/ASTRiDE", - "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", - "description": "AUTOMATED STREAK DETECTION FOR ASTRONOMICAL IMAGES", + "uid": "github/nvalimak/fsm-lite", + "url": "https://github.com/nvalimak/fsm-lite", + "rel": "/software/repository/github/nvalimak/fsm-lite", + "avatar": "https://avatars.githubusercontent.com/u/5276023?v=4", + "description": "frequency-based string mining (lite)", "topics": [] }, { - "uid": "github/dwkim78/pdtrend", - "url": "https://github.com/dwkim78/pdtrend", - "rel": "/software/repository/github/dwkim78/pdtrend", - "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", - "description": "Photometric Detrending Algorithm", + "uid": "github/mlipatov/paint_atmospheres", + "url": "https://github.com/mlipatov/paint_atmospheres", + "rel": "/software/repository/github/mlipatov/paint_atmospheres", + "avatar": "https://avatars.githubusercontent.com/u/2157807?v=4", + "description": "Synthetic spectra of rotating stars", "topics": [] }, { - "uid": "github/Joost987/MONDPMesh", - "url": "https://github.com/Joost987/MONDPMesh", - "rel": "/software/repository/github/Joost987/MONDPMesh", - "avatar": "https://avatars.githubusercontent.com/u/114094051?v=4", - "description": "Particle mesh code for modified Newtonian dynamics simulations", - "topics": [] + "uid": "github/cy-xu/cosmic-conn", + "url": "https://github.com/cy-xu/cosmic-conn", + "rel": "/software/repository/github/cy-xu/cosmic-conn", + "avatar": "https://avatars.githubusercontent.com/u/24612082?v=4", + "description": "Cosmic-CoNN: A Cosmic Ray Detection Deep-Learning Framework, Dataset, and Toolkit", + "topics": [ + "astronomy-data-reduction", + "cosmic-rays", + "ccd-observation", + "neural-networks", + "classification", + "deep-learning", + "convolutional-neural-networks" + ] }, { - "uid": "github/SpaceOdyssey/Blobby3D", - "url": "https://github.com/SpaceOdyssey/Blobby3D", - "rel": "/software/repository/github/SpaceOdyssey/Blobby3D", - "avatar": "https://avatars.githubusercontent.com/u/20017927?v=4", - "description": "Blobby3D is a tool to perform Bayesian inference for gas kinematics on emission line observations of galaxies using Integral Field Spectroscopy.", + "uid": "github/lorenzo-rovigatti/oxDNA", + "url": "https://github.com/lorenzo-rovigatti/oxDNA", + "rel": "/software/repository/github/lorenzo-rovigatti/oxDNA", + "avatar": "https://avatars.githubusercontent.com/u/68116?v=4", + "description": "A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings", "topics": [ - "astrophysics", - "bayesian-inference", - "spectroscopy" + "simulation", + "physics-simulation", + "dna" ] }, { - "uid": "github/Pranab-JD/LeXInt", - "url": "https://github.com/Pranab-JD/LeXInt", - "rel": "/software/repository/github/Pranab-JD/LeXInt", - "avatar": "https://avatars.githubusercontent.com/u/61944428?v=4", - "description": "Leja Exponential Integrators", + "uid": "github/matteobachetti/TOAextractor", + "url": "https://github.com/matteobachetti/TOAextractor", + "rel": "/software/repository/github/matteobachetti/TOAextractor", + "avatar": "https://avatars.githubusercontent.com/u/7190189?v=4", + "description": "A pipeline to extract TOAs from X-ray observations of the Crab pulsar and others. Mostly for cross-calibration purposes", "topics": [] }, { - "uid": "github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", - "url": "https://github.com/Pranab-JD/iPIC3D-CPU-SPACE-CoE", - "rel": "/software/repository/github/Pranab-JD/iPIC3D-CPU-SPACE-CoE", - "avatar": "https://avatars.githubusercontent.com/u/61944428?v=4", - "description": "the CPU version of iPIC3D supporting MPI and OpenMP", + "uid": "github/sintefore/TimeStruct.jl", + "url": "https://github.com/sintefore/TimeStruct.jl", + "rel": "/software/repository/github/sintefore/TimeStruct.jl", + "avatar": "https://avatars.githubusercontent.com/u/151619121?v=4", + "description": "Flexible time structures for optimization modeling", "topics": [] }, { - "uid": "github/Circuitscape/Omniscape.jl", - "url": "https://github.com/Circuitscape/Omniscape.jl", - "rel": "/software/repository/github/Circuitscape/Omniscape.jl", - "avatar": "https://avatars.githubusercontent.com/u/5827361?v=4", - "description": "Functions to compute omnidirectional landscape connectivity using circuit theory and the Omniscape algorithm.", + "uid": "github/GoekeLab/xpore", + "url": "https://github.com/GoekeLab/xpore", + "rel": "/software/repository/github/GoekeLab/xpore", + "avatar": "https://avatars.githubusercontent.com/u/46366103?v=4", + "description": "Identification of differential RNA modifications from nanopore direct RNA sequencing", "topics": [ - "julia-language", - "julia-package", - "connectivity", - "circuitscape", - "circuit-analysis", - "animal-movement", - "landscape-ecology", - "climate-change", - "circuit-theory", - "ecology" + "rna", + "modification", + "transcriptomics", + "machine-learning", + "genomics", + "nanopore-sequencing", + "rna-seq", + "rna-modifications", + "nanopore", + "python" ] }, { - "uid": "github/JoeMcEwen/FAST-PT", - "url": "https://github.com/JoeMcEwen/FAST-PT", - "rel": "/software/repository/github/JoeMcEwen/FAST-PT", - "avatar": "https://avatars.githubusercontent.com/u/8403883?v=4", - "description": null, + "uid": "github/justyncw/STAR_MELT", + "url": "https://github.com/justyncw/STAR_MELT", + "rel": "/software/repository/github/justyncw/STAR_MELT", + "avatar": "https://avatars.githubusercontent.com/u/19569135?v=4", + "description": "Repository for the STAR-MELT emission line analysis Jupyter notebook and Python package", "topics": [] }, { - "uid": "github/davek44/Glimmer-MG", - "url": "https://github.com/davek44/Glimmer-MG", - "rel": "/software/repository/github/davek44/Glimmer-MG", - "avatar": "https://avatars.githubusercontent.com/u/172688?v=4", - "description": "Gene prediction in metagenomic sequences using Glimmer augmented by phylogenetic classification and clustering", + "uid": "github/paulsengroup/StripePy", + "url": "https://github.com/paulsengroup/StripePy", + "rel": "/software/repository/github/paulsengroup/StripePy", + "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", + "description": "StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning", "topics": [] }, { - "uid": "github/angelmons/landlab", - "url": "https://github.com/angelmons/landlab", - "rel": "/software/repository/github/angelmons/landlab", - "avatar": "https://avatars.githubusercontent.com/u/96837810?v=4", - "description": "Landlab codebase, wiki, and tests", - "topics": [] + "uid": "github/paulsengroup/hictkR", + "url": "https://github.com/paulsengroup/hictkR", + "rel": "/software/repository/github/paulsengroup/hictkR", + "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", + "description": "R bindings for hictk: read .cool and .hic files directly from R", + "topics": [ + "bindings", + "bioinformatics", + "cooler", + "hic", + "hictk", + "r", + "hi-c" + ] }, { - "uid": "github/mariogrs/Simfast21", - "url": "https://github.com/mariogrs/Simfast21", - "rel": "/software/repository/github/mariogrs/Simfast21", - "avatar": "https://avatars.githubusercontent.com/u/7955603?v=4", - "description": "21cm code", - "topics": [] + "uid": "github/paulsengroup/hictk", + "url": "https://github.com/paulsengroup/hictk", + "rel": "/software/repository/github/paulsengroup/hictk", + "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", + "description": "Blazing fast toolkit to work with .hic and .cool files", + "topics": [ + "bioinformatics", + "cli-application", + "conversion", + "cooler", + "cxx", + "cxx-library", + "cxx17", + "hic", + "hictk" + ] }, { - "uid": "github/QCUncertainty/sigma", - "url": "https://github.com/QCUncertainty/sigma", - "rel": "/software/repository/github/QCUncertainty/sigma", - "avatar": "https://avatars.githubusercontent.com/u/168684162?v=4", - "description": "C++ Uncertainty Propagation", - "topics": [] + "uid": "github/paulsengroup/hictkpy", + "url": "https://github.com/paulsengroup/hictkpy", + "rel": "/software/repository/github/paulsengroup/hictkpy", + "avatar": "https://avatars.githubusercontent.com/u/100847901?v=4", + "description": "Python bindings for hictk: read and write .cool and .hic files directly from Python", + "topics": [ + "bindings", + "bioinformatics", + "cooler", + "hic", + "hictk", + "python3" + ] }, { - "uid": "github/kmkuesters/pooledpeaks", - "url": "https://github.com/kmkuesters/pooledpeaks", - "rel": "/software/repository/github/kmkuesters/pooledpeaks", - "avatar": "https://avatars.githubusercontent.com/u/75321402?v=4", - "description": "The Pooled Peaks Package Developed by the Blanton Lab as part of Kathleen Kuesters' Dissertation", - "topics": [] + "uid": "github/ramadatta/CPgeneProfiler", + "url": "https://github.com/ramadatta/CPgeneProfiler", + "rel": "/software/repository/github/ramadatta/CPgeneProfiler", + "avatar": "https://avatars3.githubusercontent.com/u/3212461?v=4", + "description": "CPgeneProfiler R package repository", + "topics": [ + "carbapenamase-genes", + "genome-assemblies", + "cp-gene", + "ncbi-blast", + "assembly-size", + "cocarriage" + ] }, { - "uid": "github/jmcbroome/BTE", - "url": "https://github.com/jmcbroome/BTE", - "rel": "/software/repository/github/jmcbroome/BTE", - "avatar": "https://avatars.githubusercontent.com/u/42075829?v=4", - "description": "Cython API for the Mutation Annotated Tree (MAT) Online Phylogenetics Toolkit", + "uid": "github/gramos/imagetooth", + "url": "https://github.com/gramos/imagetooth", + "rel": "/software/repository/github/gramos/imagetooth", + "avatar": "https://avatars.githubusercontent.com/u/10948?v=4", + "description": "This library allows to generate images of teeth for odontograms with tooth faces painted", "topics": [] }, { - "uid": "github/FitSNAP/FitSNAP", - "url": "https://github.com/FitSNAP/FitSNAP", - "rel": "/software/repository/github/FitSNAP/FitSNAP", - "avatar": "https://avatars.githubusercontent.com/u/55246404?v=4", - "description": "Software for generating SNAP machine-learning interatomic potentials", - "topics": [] + "uid": "github/jasonyangshadow/lpmx", + "url": "https://github.com/JasonYangShadow/lpmx", + "rel": "/software/repository/github/jasonyangshadow/lpmx", + "avatar": "https://avatars.githubusercontent.com/u/2051711?v=4", + "description": "A novel composable rootless container system", + "topics": [ + "docker", + "rootless", + "rootless-container", + "container-linux", + "unionfs", + "fakeroot", + "fakechroot", + "docker-image", + "singularity" + ] }, { - "uid": "github/aconley/mbb_emcee", - "url": "https://github.com/aconley/mbb_emcee", - "rel": "/software/repository/github/aconley/mbb_emcee", - "avatar": "https://avatars.githubusercontent.com/u/2012806?v=4", - "description": "Modified blackbody MCMC code", - "topics": [] + "uid": "github/ShaunFell/GRBoondi", + "url": "https://github.com/ShaunFell/GRBoondi", + "rel": "/software/repository/github/ShaunFell/GRBoondi", + "avatar": "https://avatars.githubusercontent.com/u/37465343?v=4", + "description": "An AMR-based open source code to evolve generalized Proca fields on arbitrary fixed backgrounds", + "topics": [ + "general-relativity", + "numerical-relativity" + ] }, { - "uid": "github/aconley/simple_cosfitter", - "url": "https://github.com/aconley/simple_cosfitter", - "rel": "/software/repository/github/aconley/simple_cosfitter", - "avatar": "https://avatars.githubusercontent.com/u/2012806?v=4", - "description": "Grid based SN cosmology fitting code", - "topics": [] + "uid": "github/pyamg/pyamg", + "url": "https://github.com/pyamg/pyamg", + "rel": "/software/repository/github/pyamg/pyamg", + "avatar": "https://avatars.githubusercontent.com/u/4763879?v=4", + "description": "Algebraic Multigrid Solvers in Python", + "topics": [ + "amg", + "solver", + "python", + "multigrid", + "sparse-matrix", + "pyamg", + "conda", + "krylov" + ] }, { - "uid": "github/eelregit/pmwd", - "url": "https://github.com/eelregit/pmwd", - "rel": "/software/repository/github/eelregit/pmwd", - "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", - "description": "Differentiable Cosmological Forward Model", + "uid": "github/Magritte-code/pomme", + "url": "https://github.com/Magritte-code/pomme", + "rel": "/software/repository/github/Magritte-code/pomme", + "avatar": "https://avatars.githubusercontent.com/u/34956055?v=4", + "description": "Bayesian model reconstruction based on astronomical spectral line observations.", "topics": [ - "cosmology", - "forward-model", - "simulation", - "differentiable", - "jax", - "n-body", - "nbody-simulation" + "3d-reconstruction", + "astronomy-astrophysics", + "astronomy-software", + "interferometry", + "spectral-lines", + "inverse-problem" ] }, { - "uid": "github/eelregit/mcfit", - "url": "https://github.com/eelregit/mcfit", - "rel": "/software/repository/github/eelregit/mcfit", - "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", - "description": "multiplicatively convolutional fast integral transforms", + "uid": "github/Magritte-code/Magritte", + "url": "https://github.com/Magritte-code/Magritte", + "rel": "/software/repository/github/Magritte-code/Magritte", + "avatar": "https://avatars.githubusercontent.com/u/34956055?v=4", + "description": "A modern software library for simulating radiation transport.", "topics": [ - "fftlog", - "integral-transform", - "numerical-integration", - "cosmology" + "radiative-transfer", + "astrophysics", + "physics-simulation" ] }, { - "uid": "github/eelregit/covdisc", - "url": "https://github.com/eelregit/covdisc", - "rel": "/software/repository/github/eelregit/covdisc", - "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", - "description": "Disconnected covariance of 2-point functions in large-scale structure of the Universe", + "uid": "github/mwanakijiji/rrlfe", + "url": "https://github.com/mwanakijiji/rrlfe", + "rel": "/software/repository/github/mwanakijiji/rrlfe", + "avatar": "https://avatars.githubusercontent.com/u/11987227?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/linneas/condetri", + "url": "https://github.com/linneas/condetri", + "rel": "/software/repository/github/linneas/condetri", + "avatar": "https://avatars.githubusercontent.com/u/11454758?v=4", + "description": "Automatically exported from code.google.com/p/condetri", "topics": [] }, { - "uid": "github/vdhooftcompmet/MS2LDA", - "url": "https://github.com/vdhooftcompmet/MS2LDA", - "rel": "/software/repository/github/vdhooftcompmet/MS2LDA", - "avatar": "https://avatars.githubusercontent.com/u/95919621?v=4", - "description": "Unsupervised Substructure Discovery using Topic Modelling with Automated Annotation.", + "uid": "github/seawander/centerRadon", + "url": "https://github.com/seawander/centerRadon", + "rel": "/software/repository/github/seawander/centerRadon", + "avatar": "https://avatars.githubusercontent.com/u/10532909?v=4", + "description": "Center determination code based on Radon Transform", "topics": [] }, { - "uid": "github/musoke/ultradark.jl", - "url": "https://github.com/musoke/UltraDark.jl", - "rel": "/software/repository/github/musoke/ultradark.jl", - "avatar": "https://avatars.githubusercontent.com/u/16665084?v=4", - "description": "Simulations of cosmological scalar fields", + "uid": "github/seawander/DebrisDiskFM", + "url": "https://github.com/seawander/DebrisDiskFM", + "rel": "/software/repository/github/seawander/DebrisDiskFM", + "avatar": "https://avatars.githubusercontent.com/u/10532909?v=4", + "description": "Debris Disk Forward Modeling", + "topics": [] + }, + { + "uid": "github/PaulHancock/Aegean", + "url": "https://github.com/PaulHancock/Aegean", + "rel": "/software/repository/github/PaulHancock/Aegean", + "avatar": "https://avatars.githubusercontent.com/u/8219382?v=4", + "description": "The Aegean source finding program and associated tools", "topics": [ - "cosmology", - "julia", - "dark-matter", - "reheating", - "scalar-dark-matter" + "astronomy-library", + "source-finding", + "python", + "cataloguer" ] }, { - "uid": "github/musoke/UltraDark.jl", - "url": "https://github.com/musoke/UltraDark.jl", - "rel": "/software/repository/github/musoke/UltraDark.jl", - "avatar": "https://avatars.githubusercontent.com/u/16665084?v=4", - "description": "Simulations of cosmological scalar fields", + "uid": "github/PaulHancock/Robbie", + "url": "https://github.com/PaulHancock/Robbie", + "rel": "/software/repository/github/PaulHancock/Robbie", + "avatar": "https://avatars.githubusercontent.com/u/8219382?v=4", + "description": "Robbie: A batch processing work-flow for the detection of radio transients and variables", + "topics": [] + }, + { + "uid": "github/B-UMMI/chewBBACA", + "url": "https://github.com/B-UMMI/chewBBACA", + "rel": "/software/repository/github/B-UMMI/chewBBACA", + "avatar": "https://avatars.githubusercontent.com/u/8566625?v=4", + "description": "A complete suite for gene-by-gene schema creation and strain identification.", "topics": [ - "cosmology", - "julia" + "wgmlst", + "cgmlst", + "mlst", + "genomics", + "outbreak-detection", + "bacterial-genome-analysis", + "bacterial-strains", + "allele-calling", + "bioinformatics" ] }, { - "uid": "github/LMJL-Alea/ktest", - "url": "https://github.com/LMJL-Alea/ktest", - "rel": "/software/repository/github/LMJL-Alea/ktest", - "avatar": "https://avatars.githubusercontent.com/u/85163893?v=4", + "uid": "github/astro-datalab/noaosourcecatalog", + "url": "https://github.com/astro-datalab/noaosourcecatalog", + "rel": "/software/repository/github/astro-datalab/noaosourcecatalog", + "avatar": "https://avatars.githubusercontent.com/u/38049825?v=4", + "description": "Source catalog of all NOAO imaging data", + "topics": [] + }, + { + "uid": "github/exoclam/gaspery", + "url": "https://github.com/exoclam/gaspery", + "rel": "/software/repository/github/exoclam/gaspery", + "avatar": "https://avatars.githubusercontent.com/u/16911363?v=4", "description": null, "topics": [] }, { - "uid": "github/twesterhout/lattice-symmetries", - "url": "https://github.com/twesterhout/lattice-symmetries", - "rel": "/software/repository/github/twesterhout/lattice-symmetries", - "avatar": "https://avatars.githubusercontent.com/u/14264576?v=4", - "description": "A package to simplify working with symmetry-adapted quantum many-body bases. Provides a good foundation for writing custom exact diagonalization and variational Monte Carlo software", - "topics": [ - "lattice-symmetries", - "symmetries", - "symmetry-groups", - "c", - "cpp17", - "quantum-mechanics", - "many-body-physics", - "exact-diagonalization", - "permutation", - "bit-manipulation", - "neural-network" - ] + "uid": "github/andymummeryastro/tidalspin", + "url": "https://github.com/andymummeryastro/tidalspin", + "rel": "/software/repository/github/andymummeryastro/tidalspin", + "avatar": "https://avatars.githubusercontent.com/u/87980281?v=4", + "description": "Python package for constraining black hole spins using the properties of relativistic tidal forces", + "topics": [] }, { - "uid": "github/ydLiu-HIT/deSALT", - "url": "https://github.com/ydLiu-HIT/deSALT", - "rel": "/software/repository/github/ydLiu-HIT/deSALT", - "avatar": "https://avatars.githubusercontent.com/u/27715065?v=4", - "description": "deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads", + "uid": "github/Onogi/VIGoR", + "url": "https://github.com/Onogi/VIGoR", + "rel": "/software/repository/github/Onogi/VIGoR", + "avatar": "https://avatars.githubusercontent.com/u/11764076?v=4", + "description": "Variational Bayesian Inference for Genome-Wide Regression", "topics": [] }, { - "uid": "github/Sydney-Informatics-Hub/OmixLitMiner", - "url": "https://github.com/Sydney-Informatics-Hub/OmixLitMiner", - "rel": "/software/repository/github/Sydney-Informatics-Hub/OmixLitMiner", - "avatar": "https://avatars.githubusercontent.com/u/38518764?v=4", - "description": "A bioinformatics tool for prioritising biological leads from omics data using literature mining.", + "uid": "github/equipeGST/RiboDoc", + "url": "https://github.com/equipeGST/RiboDoc", + "rel": "/software/repository/github/equipeGST/RiboDoc", + "avatar": "https://avatars.githubusercontent.com/u/75135539?v=4", + "description": "Docker based tool for ribosome profiling (RiboSeq) analysis", "topics": [] }, { - "uid": "github/Sydney-Informatics-Hub/geodata-harvester", - "url": "https://github.com/Sydney-Informatics-Hub/geodata-harvester", - "rel": "/software/repository/github/Sydney-Informatics-Hub/geodata-harvester", - "avatar": "https://avatars.githubusercontent.com/u/38518764?v=4", - "description": "Jumpstart your geospatial analysis with a ready-made set of spatial-temporal aligned raster maps and data frames", + "uid": "github/pencil-code/pencil-code", + "url": "https://github.com/pencil-code/pencil-code", + "rel": "/software/repository/github/pencil-code/pencil-code", + "avatar": "https://avatars.githubusercontent.com/u/11549701?v=4", + "description": "A high-order finite-difference code for compressible hydrodynamic flows with magnetic fields and particles", "topics": [] }, { - "uid": "github/RavenGan/GR2D2", - "url": "https://github.com/RavenGan/GR2D2", - "rel": "/software/repository/github/RavenGan/GR2D2", - "avatar": "https://avatars.githubusercontent.com/u/46891773?v=4", - "description": "Take Monte Carlo samples from the posterior distribution based on the graphical R2D2 prior, to estimate the precision matrix for multivariate Gaussian data", + "uid": "github/mateidavid/fast5", + "url": "https://github.com/mateidavid/fast5", + "rel": "/software/repository/github/mateidavid/fast5", + "avatar": "https://avatars.githubusercontent.com/u/1039002?v=4", + "description": "A C++ header-only library for reading Oxford Nanopore Fast5 files", "topics": [] }, { - "uid": "github/davidogara/hetGPy", - "url": "https://github.com/davidogara/hetGPy", - "rel": "/software/repository/github/davidogara/hetGPy", - "avatar": "https://avatars.githubusercontent.com/u/21281981?v=4", - "description": "Python implementation of the hetGP R package", + "uid": "github/mateidavid/nanocall", + "url": "https://github.com/mateidavid/nanocall", + "rel": "/software/repository/github/mateidavid/nanocall", + "avatar": "https://avatars.githubusercontent.com/u/1039002?v=4", + "description": "An Oxford Nanopore Basecaller", "topics": [] }, { - "uid": "github/hz1010/FIPRESCI_data_analysis", - "url": "https://github.com/hz1010/FIPRESCI_data_analysis", - "rel": "/software/repository/github/hz1010/FIPRESCI_data_analysis", - "avatar": "https://avatars.githubusercontent.com/u/47652056?v=4", - "description": "Code for FIPERSCI data", + "uid": "github/jakobherpich/pyICs", + "url": "https://github.com/jakobherpich/pyICs", + "rel": "/software/repository/github/jakobherpich/pyICs", + "avatar": "https://avatars.githubusercontent.com/u/5030846?v=4", + "description": "An initial conditions creator for isolated galaxy formation simulations.", "topics": [] }, { - "uid": "github/LeoEgidi/pivmet", - "url": "https://github.com/LeoEgidi/pivmet", - "rel": "/software/repository/github/LeoEgidi/pivmet", - "avatar": "https://avatars.githubusercontent.com/u/17299373?v=4", - "description": "pivmet: an R package proposing pivotal methods for consensus clustering and mixture modeling", + "uid": "github/NeoGeographyToolkit/StereoPipeline", + "url": "https://github.com/NeoGeographyToolkit/StereoPipeline", + "rel": "/software/repository/github/NeoGeographyToolkit/StereoPipeline", + "avatar": "https://avatars.githubusercontent.com/u/302310?v=4", + "description": "The NASA Ames Stereo Pipeline is a suite of automated geodesy & stereogrammetry tools designed for processing planetary imagery captured from orbiting and landed robotic explorers on other planets.", "topics": [] }, { - "uid": "github/longfei8533/SDC", - "url": "https://github.com/longfei8533/SDC", - "rel": "/software/repository/github/longfei8533/SDC", - "avatar": "https://avatars.githubusercontent.com/u/37660840?v=4", - "description": "Sex Differences in Cancer", + "uid": "github/macrocosme/amber_meta", + "url": "https://github.com/macrocosme/amber_meta", + "rel": "/software/repository/github/macrocosme/amber_meta", + "avatar": "https://avatars.githubusercontent.com/u/569279?v=4", + "description": "Routines to launch amber in a meta manner", "topics": [] }, { - "uid": "github/bids-standard/bids-validator", - "url": "https://github.com/bids-standard/bids-validator", - "rel": "/software/repository/github/bids-standard/bids-validator", - "avatar": "https://avatars.githubusercontent.com/u/43044189?v=4", - "description": "Validator for the Brain Imaging Data Structure", + "uid": "github/macrocosme/time_domain_astronomy_sandbox", + "url": "https://github.com/macrocosme/time_domain_astronomy_sandbox", + "rel": "/software/repository/github/macrocosme/time_domain_astronomy_sandbox", + "avatar": "https://avatars.githubusercontent.com/u/569279?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/yhoogstrate/fastafs", + "url": "https://github.com/yhoogstrate/fastafs", + "rel": "/software/repository/github/yhoogstrate/fastafs", + "avatar": "https://avatars.githubusercontent.com/u/2264697?v=4", + "description": "toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files", "topics": [ - "bids", - "neuroimaging", - "data-validation" + "dna-sequences", + "compression", + "filesystem", + "fuse-filesystem", + "fasta", + "2bit" ] }, { - "uid": "github/miche-levi/pncbc-eftofpng", - "url": "https://github.com/miche-levi/pncbc-eftofpng", - "rel": "/software/repository/github/miche-levi/pncbc-eftofpng", - "avatar": "https://avatars.githubusercontent.com/u/28704109?v=4", + "uid": "github/NuSpaceSim/nupyprop", + "url": "https://github.com/NuSpaceSim/nupyprop", + "rel": "/software/repository/github/NuSpaceSim/nupyprop", + "avatar": "https://avatars.githubusercontent.com/u/47796399?v=4", "description": null, "topics": [] }, { - "uid": "github/sbi-dev/sbi", - "url": "https://github.com/sbi-dev/sbi", - "rel": "/software/repository/github/sbi-dev/sbi", - "avatar": "https://avatars.githubusercontent.com/u/141135423?v=4", - "description": "Simulation-based inference toolkit", + "uid": "github/sihanjiao/j-comb", + "url": "https://github.com/SihanJiao/J-comb", + "rel": "/software/repository/github/sihanjiao/j-comb", + "avatar": "https://avatars.githubusercontent.com/u/31346093?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/T-CAIREM/physionet-build", + "url": "https://github.com/T-CAIREM/physionet-build", + "rel": "/software/repository/github/T-CAIREM/physionet-build", + "avatar": "https://avatars.githubusercontent.com/u/83592847?v=4", + "description": "The new PhysioNet platform.", + "topics": [] + }, + { + "uid": "github/tdaylan/pcat", + "url": "https://github.com/tdaylan/pcat", + "rel": "/software/repository/github/tdaylan/pcat", + "avatar": "https://avatars.githubusercontent.com/u/10747142?v=4", + "description": "A transdimensional, hierarchical, Bayesian framework to sample from a metamodel", + "topics": [] + }, + { + "uid": "github/ISISNeutronMuon/quickBayes", + "url": "https://github.com/ISISNeutronMuon/quickBayes", + "rel": "/software/repository/github/ISISNeutronMuon/quickBayes", + "avatar": "https://avatars.githubusercontent.com/u/30296974?v=4", + "description": "A Python package for Bayesian analysis of data.", "topics": [ - "simulation-based-inference", - "likelihood-free-inference", - "bayesian-inference", - "parameter-estimation", - "pytorch", - "machine-learning" + "python", + "bayes" ] }, { - "uid": "github/pydata/xarray", - "url": "https://github.com/pydata/xarray", - "rel": "/software/repository/github/pydata/xarray", - "avatar": "https://avatars0.githubusercontent.com/u/1284191?v=4", - "description": "N-D labeled arrays and datasets in Python", + "uid": "github/takafumi291/ESSENCE", + "url": "https://github.com/takafumi291/ESSENCE", + "rel": "/software/repository/github/takafumi291/ESSENCE", + "avatar": "https://avatars.githubusercontent.com/u/44293952?v=4", + "description": "A python package for evaluating the statistical significance of the image analysis and signal detection under correlated noise in the interferometric images (e.g., ALMA, NOEMA).", "topics": [ - "python", - "netcdf", - "numpy", - "pandas", - "xarray", - "dask" + "astronomy", + "astronomy-astrophysics", + "image", + "noise-generator", + "image-processing", + "statistics" ] }, { - "uid": "github/jesford/cluster-lensing", - "url": "https://github.com/jesford/cluster-lensing", - "rel": "/software/repository/github/jesford/cluster-lensing", - "avatar": "https://avatars.githubusercontent.com/u/6848077?v=4", - "description": "Galaxy Cluster and Weak Lensing Tools", + "uid": "github/thejackal360/OpenPelt-Public", + "url": "https://github.com/thejackal360/OpenPelt-Public", + "rel": "/software/repository/github/thejackal360/OpenPelt-Public", + "avatar": "https://avatars.githubusercontent.com/u/85142351?v=4", + "description": null, "topics": [] }, { - "uid": "github/calboo/Potential_Field_Calculator", - "url": "https://github.com/calboo/Potential_Field_Calculator", - "rel": "/software/repository/github/calboo/Potential_Field_Calculator", - "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", - "description": "A collection of codes for generating and visualising potential magnetic fields. If this numerical code is used, authors kindly request an acknowledgment via citation of paper https://www.aanda.org/articles/aa/full_html/2019/05/aa34684-18/aa34684-18.html", + "uid": "github/conda/pycosat", + "url": "https://github.com/conda/pycosat", + "rel": "/software/repository/github/conda/pycosat", + "avatar": "https://avatars.githubusercontent.com/u/6392739?v=4", + "description": "Python bindings to picosat (a SAT solver)", "topics": [] }, { - "uid": "github/calboo/wigglewave", - "url": "https://github.com/calboo/Wigglewave", - "rel": "/software/repository/github/calboo/wigglewave", - "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", - "description": "Wigglewave is a FORTRAN code that uses an RK4 finite difference method to solve the linearised governing equations for Torsional Alfv\u00e9n Waves (TAWs) propagating in a plasma with negligible plasma beta and in a force-free axisymmetric magnetic field, with no azimuthal component, embedded in a high density divergent tube structure.", - "topics": [] + "uid": "github/conda/conda", + "url": "https://github.com/conda/conda", + "rel": "/software/repository/github/conda/conda", + "avatar": "https://avatars0.githubusercontent.com/u/6392739?v=4", + "description": "OS-agnostic, system-level binary package manager and ecosystem", + "topics": [ + "conda", + "package-management" + ] }, { - "uid": "github/calboo/TAWAS", - "url": "https://github.com/calboo/TAWAS", - "rel": "/software/repository/github/calboo/TAWAS", - "avatar": "https://avatars.githubusercontent.com/u/33519577?v=4", - "description": "TAWAS is an IDL script for solving the wave equation for torsional Alfv\u00e8n waves in a viscous plasma. The background magnetic field is axisymmetric and force-free with no azimuthal component and the plasma beta is assumed to be negligable. The solution is calculated using the analytical formula presented in https://academic.oup.com/mnras/article-abstract/510/2/1910/6449388?redirectedFrom=fulltext. ", + "uid": "github/conda/conda-package-handling", + "url": "https://github.com/conda/conda-package-handling", + "rel": "/software/repository/github/conda/conda-package-handling", + "avatar": "https://avatars.githubusercontent.com/u/6392739?v=4", + "description": "Create and extract conda packages of various formats", "topics": [] }, { - "uid": "github/yqiuu/starduster", - "url": "https://github.com/yqiuu/starduster", - "rel": "/software/repository/github/yqiuu/starduster", - "avatar": "https://avatars.githubusercontent.com/u/26683739?v=4", - "description": "A multi-wavelength SED model based on radiative transfer and deep learning.", - "topics": [ - "deep-neural-networks", - "radiative-transfer", - "astronomy" - ] + "uid": "github/AntonelliLab/seqcap_processor", + "url": "https://github.com/AntonelliLab/seqcap_processor", + "rel": "/software/repository/github/AntonelliLab/seqcap_processor", + "avatar": "https://avatars.githubusercontent.com/u/15021707?v=4", + "description": "Bioinformatic pipeline for processing Sequence Capture data for Phylogenetics", + "topics": [] }, { - "uid": "github/yqiuu/spectuner", - "url": "https://github.com/yqiuu/spectuner", - "rel": "/software/repository/github/yqiuu/spectuner", - "avatar": "https://avatars.githubusercontent.com/u/26683739?v=4", - "description": "A tool for automated line identification of interstellar molecules.", + "uid": "github/michauhl/RBPBench", + "url": "https://github.com/michauhl/RBPBench", + "rel": "/software/repository/github/michauhl/RBPBench", + "avatar": "https://avatars.githubusercontent.com/u/10600238?v=4", + "description": "Evaluate CLIP-seq and other genomic region data using a comprehensive collection of known RBP binding motifs", "topics": [] }, { - "uid": "github/ABSESpy/ABSESpy", - "url": "https://github.com/ABSESpy/ABSESpy", - "rel": "/software/repository/github/ABSESpy/ABSESpy", - "avatar": "https://avatars.githubusercontent.com/u/148390310?v=4", - "description": "An Agent-based Social-ecological System python framework for coupling human-nature researches. ", + "uid": "github/xfengnefx/hifiasm-meta", + "url": "https://github.com/xfengnefx/hifiasm-meta", + "rel": "/software/repository/github/xfengnefx/hifiasm-meta", + "avatar": "https://avatars.githubusercontent.com/u/61363437?v=4", + "description": "hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.", "topics": [] }, { - "uid": "github/athulpg007/AMAT", - "url": "https://github.com/athulpg007/AMAT", - "rel": "/software/repository/github/athulpg007/AMAT", - "avatar": "https://avatars.githubusercontent.com/u/6537239?v=4", - "description": "Home of the Aerocapture Mission Analysis Tool (AMAT). For project documentation visit:", + "uid": "github/genialis/RNAnorm", + "url": "https://github.com/genialis/RNAnorm", + "rel": "/software/repository/github/genialis/RNAnorm", + "avatar": "https://avatars.githubusercontent.com/u/2120224?v=4", + "description": "Normalization of RNA-seq gene expression", "topics": [] }, { - "uid": "github/kutaslab/fitgrid", - "url": "https://github.com/kutaslab/fitgrid", - "rel": "/software/repository/github/kutaslab/fitgrid", - "avatar": "https://avatars.githubusercontent.com/u/39499147?v=4", - "description": "Multichannel event-related time-series regression modeling for EEG, MEG, and sensor array data", + "uid": "github/hknd23/idcempy", + "url": "https://github.com/hknd23/idcempy", + "rel": "/software/repository/github/hknd23/idcempy", + "avatar": "https://avatars.githubusercontent.com/u/35204932?v=4", + "description": "Inflated Discrete Choice Models", "topics": [ - "python", - "eeg", - "regression" + "mixture-model", + "discrete-choice", + "multinomial-logistic-regression", + "ordered-probit-regression" ] }, { - "uid": "github/laristra/flecsph", - "url": "https://github.com/laristra/flecsph", - "rel": "/software/repository/github/laristra/flecsph", - "avatar": "https://avatars.githubusercontent.com/u/24596390?v=4", - "description": "A Parallel and Distributed SPH Implementation Based on the FleCSI", + "uid": "github/farhanferoz/MultiNest", + "url": "https://github.com/farhanferoz/MultiNest", + "rel": "/software/repository/github/farhanferoz/MultiNest", + "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", + "description": "MultiNest is a Bayesian inference tool which calculates the evidence and explores the parameter space which may contain multiple posterior modes and pronounced (curving) degeneracies in moderately high dimensions. ", "topics": [] }, { - "uid": "github/bodulic/CATS-rb", - "url": "https://github.com/bodulic/CATS-rb", - "rel": "/software/repository/github/bodulic/CATS-rb", - "avatar": "https://avatars.githubusercontent.com/u/43442824?v=4", + "uid": "github/farhanferoz/BAMBI", + "url": "https://github.com/farhanferoz/BAMBI", + "rel": "/software/repository/github/farhanferoz/BAMBI", + "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", "description": null, "topics": [] }, { - "uid": "github/bodulic/CATS-rf", - "url": "https://github.com/bodulic/CATS-rf", - "rel": "/software/repository/github/bodulic/CATS-rf", - "avatar": "https://avatars.githubusercontent.com/u/43442824?v=4", - "description": null, + "uid": "github/farhanferoz/SkyNet", + "url": "https://github.com/farhanferoz/SkyNet", + "rel": "/software/repository/github/farhanferoz/SkyNet", + "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", + "description": "SkyNet is an efficient and robust neural network training code for machine learning.", "topics": [] }, { - "uid": "github/a-griffiths/AutoSpec", - "url": "https://github.com/a-griffiths/AutoSpec", - "rel": "/software/repository/github/a-griffiths/AutoSpec", - "avatar": "https://avatars.githubusercontent.com/u/26306805?v=4", - "description": "Fast Automated Spectral Extraction Software for IFU Datacubes", - "topics": [ - "cross-correlation", - "spectra", - "datacube", - "astronomy", - "muse", - "automated", - "ifu" - ] + "uid": "github/AFD-Illinois/ebhlight", + "url": "https://github.com/AFD-Illinois/ebhlight", + "rel": "/software/repository/github/AFD-Illinois/ebhlight", + "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", + "description": "Two-temperature General Relativistic Radiation Magnetohydrodynamics", + "topics": [] }, { - "uid": "github/CompNet/Renard", - "url": "https://github.com/CompNet/Renard", - "rel": "/software/repository/github/CompNet/Renard", - "avatar": "https://avatars.githubusercontent.com/u/1487813?v=4", - "description": "Relationships Extraction from NARrative Documents", - "topics": [ - "character-networks", - "coreference-resolution", - "ner", - "network-extraction", - "novels", - "speaker-attribution", - "alias-resolution" - ] + "uid": "github/AFD-Illinois/iharm3d", + "url": "https://github.com/AFD-Illinois/iharm3d", + "rel": "/software/repository/github/AFD-Illinois/iharm3d", + "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", + "description": "Hybrid MPI/OpenMP 3D HARM with vectorization", + "topics": [] }, { - "uid": "github/lbcb-sci/raven", - "url": "https://github.com/lbcb-sci/raven", - "rel": "/software/repository/github/lbcb-sci/raven", - "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", - "description": "De novo genome assembler for long uncorrected reads", - "topics": [] + "uid": "github/landoskape/syd", + "url": "https://github.com/landoskape/syd", + "rel": "/software/repository/github/landoskape/syd", + "avatar": "https://avatars.githubusercontent.com/u/17303166?v=4", + "description": "A package to help you share your data by making GUIs the easiest thing in the world!", + "topics": [ + "data-science", + "data-visualization", + "flask", + "gui", + "interactive-visualizations", + "matplotlib", + "python" + ] }, { - "uid": "github/lbcb-sci/racon", - "url": "https://github.com/lbcb-sci/racon", - "rel": "/software/repository/github/lbcb-sci/racon", - "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", - "description": "Ultrafast consensus module for raw de novo genome assembly of long uncorrected reads", + "uid": "github/peterjc/galaxy_blast", + "url": "https://github.com/peterjc/galaxy_blast", + "rel": "/software/repository/github/peterjc/galaxy_blast", + "avatar": "https://avatars.githubusercontent.com/u/63959?v=4", + "description": "Galaxy wrappers for NCBI BLAST+ and related BLAST tools.", "topics": [] }, { - "uid": "github/lbcb-sci/graphmap2", - "url": "https://github.com/lbcb-sci/graphmap2", - "rel": "/software/repository/github/lbcb-sci/graphmap2", - "avatar": "https://avatars.githubusercontent.com/u/45172103?v=4", - "description": "GraphMap - A highly sensitive and accurate mapper for long, error-prone reads http://www.nature.com/ncomms/2016/160415/ncomms11307/full/ncomms11307.html https://www.biorxiv.org/content/10.1101/720458v1", + "uid": "github/rfeldmann/leopy", + "url": "https://github.com/rfeldmann/leopy", + "rel": "/software/repository/github/rfeldmann/leopy", + "avatar": "https://avatars.githubusercontent.com/u/11809604?v=4", + "description": "Likelihood Estimation of Observational data with Python", "topics": [] }, { - "uid": "github/Balaje/iceFem", - "url": "https://github.com/Balaje/iceFem", - "rel": "/software/repository/github/Balaje/iceFem", - "avatar": "https://avatars.githubusercontent.com/u/4852064?v=4", - "description": "Contains FreeFem source codes for modelling wave induced ice-shelf vibrations", + "uid": "github/mfem/mfem", + "url": "https://github.com/mfem/mfem", + "rel": "/software/repository/github/mfem/mfem", + "avatar": "https://avatars.githubusercontent.com/u/12879105?v=4", + "description": "Lightweight, general, scalable C++ library for finite element methods", "topics": [ - "freefem", - "ice-shelf" + "finite-elements", + "high-order", + "high-performance-computing", + "parallel-computing", + "amr", + "computational-science", + "fem", + "scientific-computing", + "hpc", + "math-physics", + "radiuss" ] }, { - "uid": "github/lucian-ilie/DELPHI", - "url": "https://github.com/lucian-ilie/DELPHI", - "rel": "/software/repository/github/lucian-ilie/DELPHI", - "avatar": "https://avatars.githubusercontent.com/u/12052304?v=4", - "description": "Deep learning protein-protein binding sites prediction", - "topics": [] - }, - { - "uid": "github/altjerue/paramo", - "url": "https://github.com/altjerue/paramo", - "rel": "/software/repository/github/altjerue/paramo", - "avatar": "https://avatars.githubusercontent.com/u/9192916?v=4", - "description": "Vine a Comala porque me dijeron que ac\u00e1 viv\u00eda mi padre, un tal Pedro P\u00e1ramo.", + "uid": "github/yuansliu/minirmd", + "url": "https://github.com/yuansliu/minirmd", + "rel": "/software/repository/github/yuansliu/minirmd", + "avatar": "https://avatars2.githubusercontent.com/u/7776655?v=4", + "description": null, "topics": [] }, { - "uid": "github/RudolfCardinal/camcops", - "url": "https://github.com/ucam-department-of-psychiatry/camcops", - "rel": "/software/repository/github/RudolfCardinal/camcops", - "avatar": "https://avatars.githubusercontent.com/u/47028450?v=4", - "description": "Cambridge Cognitive and Psychiatric Test Kit (CamCOPS)", + "uid": "github/HinodeXRT/xrtpy", + "url": "https://github.com/HinodeXRT/xrtpy", + "rel": "/software/repository/github/HinodeXRT/xrtpy", + "avatar": "https://avatars.githubusercontent.com/u/77019319?v=4", + "description": null, "topics": [] }, { - "uid": "github/CLIMADA-project/climada_python", - "url": "https://github.com/CLIMADA-project/climada_python", - "rel": "/software/repository/github/CLIMADA-project/climada_python", - "avatar": "https://avatars.githubusercontent.com/u/44439051?v=4", - "description": "Python (3.8+) version of CLIMADA", + "uid": "github/fripon/freeture", + "url": "https://github.com/fripon/freeture", + "rel": "/software/repository/github/fripon/freeture", + "avatar": "https://avatars.githubusercontent.com/u/9007954?v=4", + "description": "A Free software to capTure meteors ", "topics": [] }, { - "uid": "github/toruseo/UXsim", - "url": "https://github.com/toruseo/UXsim", - "rel": "/software/repository/github/toruseo/UXsim", - "avatar": "https://avatars.githubusercontent.com/u/34780089?v=4", - "description": "Vehicular traffic flow simulator in road network, written in pure Python", - "topics": [ - "traffic", - "traffic-flow", - "traffic-flow-simulation", - "traffic-simulation", - "dynamic-traffic-assignment", - "simulation", - "transportation", - "transportation-network" - ] - }, - { - "uid": "github/martinvonk/SPEI", - "url": "https://github.com/martinvonk/SPEI", - "rel": "/software/repository/github/martinvonk/SPEI", - "avatar": "https://avatars.githubusercontent.com/u/66305055?v=4", - "description": "A Python package to calculate and visualize some popular drought indices such as the SPI, SPEI and SGI.", + "uid": "github/erikbern/ann-benchmarks", + "url": "https://github.com/erikbern/ann-benchmarks", + "rel": "/software/repository/github/erikbern/ann-benchmarks", + "avatar": "https://avatars2.githubusercontent.com/u/1027979?v=4", + "description": "Benchmarks of approximate nearest neighbor libraries in Python", "topics": [ - "drought", - "groundwater", - "hydrology", - "python", - "sgi", - "spei", - "timeseries", - "spi", - "drought-index", - "drought-indices" + "nearest-neighbors", + "benchmark", + "docker" ] }, { - "uid": "github/ColemanRHarris/mxnorm", - "url": "https://github.com/ColemanRHarris/mxnorm", - "rel": "/software/repository/github/ColemanRHarris/mxnorm", - "avatar": "https://avatars.githubusercontent.com/u/29362888?v=4", - "description": "R package to normalize multiplexed imaging data.", + "uid": "github/mlpack/mlpack", + "url": "https://github.com/mlpack/mlpack", + "rel": "/software/repository/github/mlpack/mlpack", + "avatar": "https://avatars0.githubusercontent.com/u/10216045?v=4", + "description": "mlpack: a scalable C++ machine learning library -- ", "topics": [ - "r", - "package", - "cran" + "machine-learning-library", + "c-plus-plus", + "deep-learning", + "nearest-neighbor-search", + "regression", + "machine-learning" ] }, { - "uid": "github/riatelab/osrm", - "url": "https://github.com/riatelab/osrm", - "rel": "/software/repository/github/riatelab/osrm", - "avatar": "https://avatars.githubusercontent.com/u/17590565?v=4", - "description": "Shortest Paths and Travel Time from OpenStreetMap with R", + "uid": "github/peterspackman/occ", + "url": "https://github.com/peterspackman/occ", + "rel": "/software/repository/github/peterspackman/occ", + "avatar": "https://avatars.githubusercontent.com/u/7966525?v=4", + "description": "Open Computational Chemistry in C++", "topics": [ - "osrm", - "travel", - "openstreetmap", - "r", - "cran", - "shortest-paths", - "r-package" + "chemistry", + "library", + "quantum-chemistry", + "cpp17" ] }, { - "uid": "github/vhaasteren/piccard", - "url": "https://github.com/vhaasteren/piccard", - "rel": "/software/repository/github/vhaasteren/piccard", - "avatar": "https://avatars.githubusercontent.com/u/3092444?v=4", - "description": "Piccard: pulsar timing data analysis package", + "uid": "github/marziarivi/RadioLensfit2", + "url": "https://github.com/marziarivi/RadioLensfit2", + "rel": "/software/repository/github/marziarivi/RadioLensfit2", + "avatar": "https://avatars.githubusercontent.com/u/6614454?v=4", + "description": "Radio Weak Lensing shear measurement in the Visibility Domain ", "topics": [] }, { - "uid": "github/ExaScience/elprep", - "url": "https://github.com/ExaScience/elprep", - "rel": "/software/repository/github/ExaScience/elprep", - "avatar": "https://avatars.githubusercontent.com/u/5629178?v=4", - "description": "a high-performance tool for analyzing .sam/.bam files (up to and including variant calling) in sequencing pipelines.", + "uid": "github/C-Briddon/SELCIE", + "url": "https://github.com/C-Briddon/SELCIE", + "rel": "/software/repository/github/C-Briddon/SELCIE", + "avatar": "https://avatars.githubusercontent.com/u/57907108?v=4", + "description": null, "topics": [] }, { - "uid": "github/JoWestermann/smolyax", - "url": "https://github.com/JoWestermann/smolyax", - "rel": "/software/repository/github/JoWestermann/smolyax", - "avatar": "https://avatars.githubusercontent.com/u/91186482?v=4", - "description": "Fast high-dimensional interpolation of vector valued functions in JAX", - "topics": [ - "barycentric-interpolation", - "jax", - "polynomial-interpolation", - "sparse-grids", - "smolyak-operator", - "numba", - "polynomial-chaos" - ] - }, - { - "uid": "github/carlosborca/CrystaLattE", - "url": "https://github.com/carlosborca/CrystaLattE", - "rel": "/software/repository/github/carlosborca/CrystaLattE", - "avatar": "https://avatars2.githubusercontent.com/u/23508182?v=4", - "description": "Set of scripts to automate the calculation of crystal lattice energies.", + "uid": "github/afd-illinois/grim", + "url": "https://github.com/AFD-Illinois/grim", + "rel": "/software/repository/github/afd-illinois/grim", + "avatar": "https://avatars.githubusercontent.com/u/10577421?v=4", + "description": "General Relativistic Implicit Magnetohydrodynamics", "topics": [] }, { - "uid": "github/epi2me-labs/mapula", - "url": "https://github.com/epi2me-labs/mapula", - "rel": "/software/repository/github/epi2me-labs/mapula", - "avatar": "https://avatars.githubusercontent.com/u/60506060?v=4", - "description": "Generate mapping stats at your chosen level of aggregation", + "uid": "github/ec363/parsleyapp", + "url": "https://github.com/ec363/parsleyapp", + "rel": "/software/repository/github/ec363/parsleyapp", + "avatar": "https://avatars.githubusercontent.com/u/51139488?v=4", + "description": "Data parsing (data extraction, tidying and metadata joining) for plate reader export files", "topics": [] }, { - "uid": "github/eggplantbren/Exoplanet", - "url": "https://github.com/eggplantbren/Exoplanet", - "rel": "/software/repository/github/eggplantbren/Exoplanet", - "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", - "description": "Exoplanet stuff with RJObject and lookup tables", + "uid": "github/ec363/fpcountr", + "url": "https://github.com/ec363/fpcountr", + "rel": "/software/repository/github/ec363/fpcountr", + "avatar": "https://avatars.githubusercontent.com/u/51139488?v=4", + "description": "Fluorescent protein calibration for plate readers", "topics": [] }, { - "uid": "github/eggplantbren/DNest4", - "url": "https://github.com/eggplantbren/DNest4", - "rel": "/software/repository/github/eggplantbren/DNest4", - "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", - "description": "Diffusive Nested Sampling", - "topics": [ - "bayesian-inference", - "markov-chain-monte-carlo", - "nested-sampling", - "probability", - "probabilistic-programming" - ] + "uid": "github/YaoGroup/DIFFICE_jax", + "url": "https://github.com/YaoGroup/DIFFICE_jax", + "rel": "/software/repository/github/YaoGroup/DIFFICE_jax", + "avatar": "https://avatars.githubusercontent.com/u/85553836?v=4", + "description": "Differentiable neural-network solver for data assimilation of ice shelves written in JAX", + "topics": [] }, { - "uid": "github/eggplantbren/RJObject", - "url": "https://github.com/eggplantbren/RJObject", - "rel": "/software/repository/github/eggplantbren/RJObject", - "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", - "description": "General code for birth/death stuff within DNest3", + "uid": "github/MDamiano/ExoTR", + "url": "https://github.com/MDamiano/ExoTR", + "rel": "/software/repository/github/MDamiano/ExoTR", + "avatar": "https://avatars.githubusercontent.com/u/7510364?v=4", + "description": "A Bayesian inverse retrieval algorithm to interpret exoplanetary transmission spectra. ", "topics": [] }, { - "uid": "github/eggplantbren/DNest3", - "url": "https://github.com/eggplantbren/DNest3", - "rel": "/software/repository/github/eggplantbren/DNest3", - "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", - "description": "Diffusive Nested Sampling", + "uid": "github/venkateshgopinath/FAlCon-DNS", + "url": "https://github.com/venkateshgopinath/FAlCon-DNS", + "rel": "/software/repository/github/venkateshgopinath/FAlCon-DNS", + "avatar": "https://avatars.githubusercontent.com/u/80627921?v=4", + "description": "FAlCon-DNS (Framework of time schemes for Direct Numerical Simulation of Annular Convection) is a code to solve 2D thermal convection in an annulus. It has a suite of IMEX time integration schemes.", "topics": [] }, { - "uid": "github/eggplantbren/RMHB", - "url": "https://github.com/eggplantbren/RMHB", - "rel": "/software/repository/github/eggplantbren/RMHB", - "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", - "description": "Source code for 'hierarchical reverberation mapping'", - "topics": [] + "uid": "github/GOMC-WSU/GOMC", + "url": "https://github.com/GOMC-WSU/GOMC", + "rel": "/software/repository/github/GOMC-WSU/GOMC", + "avatar": "https://avatars.githubusercontent.com/u/11666264?v=4", + "description": "GOMC - GPU Optimized Monte Carlo is a parallel molecular simulation code designed for high-performance simulation of large systems", + "topics": [ + "monte-carlo", + "monte-carlo-simulation", + "gpu", + "openmp", + "adsorption", + "free-energy", + "phase-equilibrium", + "surface-tension", + "cuda", + "gibbs-ensemble", + "grand-canonical-monte-carlo" + ] }, { - "uid": "github/EnsembleGovServices/kamodo-core", - "url": "https://github.com/EnsembleGovServices/kamodo-core", - "rel": "/software/repository/github/EnsembleGovServices/kamodo-core", - "avatar": "https://avatars.githubusercontent.com/u/73653894?v=4", - "description": "A functional API for space weather models and data", + "uid": "github/GOMC-WSU/MoSDeF-dihedral-fit", + "url": "https://github.com/GOMC-WSU/MoSDeF-dihedral-fit", + "rel": "/software/repository/github/GOMC-WSU/MoSDeF-dihedral-fit", + "avatar": "https://avatars.githubusercontent.com/u/11666264?v=4", + "description": "MoSDeF-dihedral-fit: A simple software package to fit dihedrals via the MoSDeF software", "topics": [] }, { - "uid": "github/Ecos-platform/ecos", - "url": "https://github.com/Ecos-platform/ecos", - "rel": "/software/repository/github/Ecos-platform/ecos", - "avatar": "https://avatars.githubusercontent.com/u/89104260?v=4", - "description": "A simple, fast and easy to use co-simulation engine.", + "uid": "github/cosimoNigro/agnpy", + "url": "https://github.com/cosimoNigro/agnpy", + "rel": "/software/repository/github/cosimoNigro/agnpy", + "avatar": "https://avatars.githubusercontent.com/u/26409711?v=4", + "description": "Modelling jetted Active Galactic Nuclei radiative processes with python", "topics": [ - "co-simulation", - "fmi-standard", - "ssp-standard", - "command-line-tool", - "cpp20", - "fmi2", - "fmi3", - "python3", - "fmi1" + "leptonic", + "radiative-processes", + "agn", + "numpy", + "astropy", + "python", + "jets", + "blazar" ] }, { - "uid": "github/asalda/FiCUS", - "url": "https://github.com/asalda/FiCUS", - "rel": "/software/repository/github/asalda/FiCUS", - "avatar": "https://avatars.githubusercontent.com/u/89804075?v=4", - "description": "FItting the stellar Continuum of Uv Spectra (FiCUS)", - "topics": [] + "uid": "github/csinva/imodels", + "url": "https://github.com/csinva/imodels", + "rel": "/software/repository/github/csinva/imodels", + "avatar": "https://avatars.githubusercontent.com/u/4960970?v=4", + "description": "Interpretable ML package \ud83d\udd0d for concise, transparent, and accurate predictive modeling (sklearn-compatible).", + "topics": [ + "interpretability", + "machine-learning", + "data-science", + "artificial-intelligence", + "ml", + "ai", + "statistics", + "scikit-learn", + "python", + "bayesian-rule-lists", + "optimal-classification-tree", + "rulefit", + "uncertainty", + "demo", + "tutorial", + "imodels", + "rule-learning", + "supervised-learning" + ] }, { - "uid": "github/Battery-Intelligence-Lab/dtw-cpp", - "url": "https://github.com/Battery-Intelligence-Lab/dtw-cpp", - "rel": "/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", - "avatar": "https://avatars.githubusercontent.com/u/93661605?v=4", - "description": "DTWC++", + "uid": "github/mariuzka/pop2net", + "url": "https://github.com/mariuzka/pop2net", + "rel": "/software/repository/github/mariuzka/pop2net", + "avatar": "https://avatars.githubusercontent.com/u/64357369?v=4", + "description": "Pop2net simplifies the creation of network structures for agent-based models.", "topics": [ - "dynamic-time-warping", - "time-series-clustering" + "agent-based-modeling", + "bipartite-graphs", + "network-generator", + "survey-data" ] }, { - "uid": "github/paumard/cubefit", - "url": "https://github.com/paumard/cubefit", - "rel": "/software/repository/github/paumard/cubefit", - "avatar": "https://avatars.githubusercontent.com/u/620826?v=4", + "uid": "github/zenitani/OpenMHD", + "url": "https://github.com/zenitani/OpenMHD", + "rel": "/software/repository/github/zenitani/OpenMHD", + "avatar": "https://avatars.githubusercontent.com/u/97611?v=4", "description": null, "topics": [] }, { - "uid": "github/mehdirezaie/SYSNet", - "url": "https://github.com/mehdirezaie/SYSNet", - "rel": "/software/repository/github/mehdirezaie/SYSNet", - "avatar": "https://avatars.githubusercontent.com/u/15114808?v=4", - "description": "End-to-End pipeline for Neural Network modeling of imaging systematics in Galaxy Surveys", + "uid": "github/srigas/jaxkan", + "url": "https://github.com/srigas/jaxKAN", + "rel": "/software/repository/github/srigas/jaxkan", + "avatar": "https://avatars.githubusercontent.com/u/70939180?v=4", + "description": "Kolmogorov-Arnold Networks built on JAX", "topics": [ - "neural-networks", - "galaxy-survey", - "big-data" + "flax", + "jax", + "kolmogorov-arnold-networks" ] }, { - "uid": "github/BMILAB/scLINE", - "url": "https://github.com/BMILAB/scLINE", - "rel": "/software/repository/github/BMILAB/scLINE", - "avatar": "https://avatars.githubusercontent.com/u/33172581?v=4", + "uid": "github/Jayshil/pycdata", + "url": "https://github.com/Jayshil/pycdata", + "rel": "/software/repository/github/Jayshil/pycdata", + "avatar": "https://avatars.githubusercontent.com/u/40012574?v=4", + "description": "A module to import datasets from various instruments in pycheops", + "topics": [] + }, + { + "uid": "github/davidogara/hetGPy", + "url": "https://github.com/davidogara/hetGPy", + "rel": "/software/repository/github/davidogara/hetGPy", + "avatar": "https://avatars.githubusercontent.com/u/21281981?v=4", + "description": "Python implementation of the hetGP R package", + "topics": [] + }, + { + "uid": "github/sys-bio/ratesb_python", + "url": "https://github.com/sys-bio/ratesb_python", + "rel": "/software/repository/github/sys-bio/ratesb_python", + "avatar": "https://avatars.githubusercontent.com/u/5590646?v=4", + "description": "Analysis of rate laws in reaction networks.", + "topics": [] + }, + { + "uid": "github/Computational-NeuroGenetics/deMeta-beta", + "url": "https://github.com/Computational-NeuroGenetics/deMeta-beta", + "rel": "/software/repository/github/Computational-NeuroGenetics/deMeta-beta", + "avatar": "https://avatars.githubusercontent.com/u/69991253?v=4", "description": null, "topics": [] }, { - "uid": "github/JorenSix/Olaf", - "url": "https://github.com/JorenSix/Olaf", - "rel": "/software/repository/github/JorenSix/Olaf", - "avatar": "https://avatars.githubusercontent.com/u/60453?v=4", - "description": "Olaf: Overly Lightweight Acoustic Fingerprinting is a portable acoustic fingerprinting system.", - "topics": [ - "music-information-retrieval", - "audio-fingerprinting", - "acoustic-fingerprinting", - "wasm", - "esp32" - ] + "uid": "github/davidpamos/MultiModes", + "url": "https://github.com/davidpamos/MultiModes", + "rel": "/software/repository/github/davidpamos/MultiModes", + "avatar": "https://avatars.githubusercontent.com/u/69325417?v=4", + "description": "An efficient tool for the analysis of pulsating stars", + "topics": [] }, { - "uid": "github/JorenSix/Panako", - "url": "https://github.com/JorenSix/Panako", - "rel": "/software/repository/github/JorenSix/Panako", - "avatar": "https://avatars.githubusercontent.com/u/60453?v=4", - "description": "The Panako acoustic fingerprinting system.", + "uid": "github/JuliaHealth/NeuroAnalyzer.jl", + "url": "https://github.com/JuliaHealth/NeuroAnalyzer.jl", + "rel": "/software/repository/github/JuliaHealth/NeuroAnalyzer.jl", + "avatar": "https://avatars.githubusercontent.com/u/64336345?v=4", + "description": "Julia toolbox for analyzing neurophysiological data", "topics": [ - "music-information-retrieval", - "acoustic-fingerprinting", - "duplicate-detection", - "audio-processing" + "ecog", + "eeg", + "ieeg", + "meg", + "neuroscience", + "nirs", + "psychology", + "seeg", + "tdcs", + "brain", + "julia", + "tacs", + "tms", + "trns" ] }, { - "uid": "github/wwood/kingfisher-download", - "url": "https://github.com/wwood/kingfisher-download", - "rel": "/software/repository/github/wwood/kingfisher-download", - "avatar": "https://avatars.githubusercontent.com/u/15348?v=4", - "description": "Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.", - "topics": [ - "sra", - "aspera-client", - "fastq-files" - ] + "uid": "github/SeamusClarke/FragMent", + "url": "https://github.com/SeamusClarke/FragMent", + "rel": "/software/repository/github/SeamusClarke/FragMent", + "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", + "description": "A collection of fragmentation techniques for studying filaments", + "topics": [] }, { - "uid": "github/NuGrid/NuPyCEE", - "url": "https://github.com/NuGrid/NuPyCEE", - "rel": "/software/repository/github/NuGrid/NuPyCEE", - "avatar": "https://avatars.githubusercontent.com/u/17138624?v=4", - "description": "You can find the website of NuPyCEE at ", + "uid": "github/SeamusClarke/BTS", + "url": "https://github.com/SeamusClarke/BTS", + "rel": "/software/repository/github/SeamusClarke/BTS", + "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", + "description": "Behind The Spectrum (BTS) fitter ", "topics": [ - "galaxies", - "chemical-evolution", - "nugrid" + "astrophysics", + "fitting-algorithm", + "spectra" ] }, { - "uid": "github/SandyYuan/GRAND-HOD", - "url": "https://github.com/SandyYuan/GRAND-HOD", - "rel": "/software/repository/github/SandyYuan/GRAND-HOD", - "avatar": "https://avatars.githubusercontent.com/u/12791861?v=4", - "description": "A decorated HOD code in Python that is differentiable and incorporates various generalizations to the standard HOD.", + "uid": "github/cancerit/alleleCount", + "url": "https://github.com/cancerit/alleleCount", + "rel": "/software/repository/github/cancerit/alleleCount", + "avatar": "https://avatars.githubusercontent.com/u/7450587?v=4", + "description": "Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings)", + "topics": [] + }, + { + "uid": "github/saeyslab/CytoNorm_Figures", + "url": "https://github.com/saeyslab/CytoNorm_Figures", + "rel": "/software/repository/github/saeyslab/CytoNorm_Figures", + "avatar": "https://avatars0.githubusercontent.com/u/18485264?v=4", + "description": "Scripts to replicate the figures reported in the CytofNorm publication. ", + "topics": [] + }, + { + "uid": "github/saeyslab/PeacoQC", + "url": "https://github.com/saeyslab/PeacoQC", + "rel": "/software/repository/github/saeyslab/PeacoQC", + "avatar": "https://avatars.githubusercontent.com/u/18485264?v=4", + "description": "Peak-based selection of high quality cytometry data", "topics": [] }, { - "uid": "github/SandyYuan/s3PCF", - "url": "https://github.com/SandyYuan/s3PCF", - "rel": "/software/repository/github/SandyYuan/s3PCF", - "avatar": "https://avatars.githubusercontent.com/u/12791861?v=4", - "description": "squeezed 3PCF package", + "uid": "github/saeyslab/nichenetr", + "url": "https://github.com/saeyslab/nichenetr", + "rel": "/software/repository/github/saeyslab/nichenetr", + "avatar": "https://avatars0.githubusercontent.com/u/18485264?v=4", + "description": "NicheNet: predict active ligand-target links between interacting cells", "topics": [] }, { - "uid": "github/shaniAmare/long_read_tools", - "url": "https://github.com/shaniAmare/long_read_tools", - "rel": "/software/repository/github/shaniAmare/long_read_tools", - "avatar": "https://avatars1.githubusercontent.com/u/43805905?v=4", - "description": "A catalogue of available long read sequencing data analysis tools", + "uid": "github/materialsproject/pymatgen-analysis-defects", + "url": "https://github.com/materialsproject/pymatgen-analysis-defects", + "rel": "/software/repository/github/materialsproject/pymatgen-analysis-defects", + "avatar": "https://avatars.githubusercontent.com/u/867057?v=4", + "description": "Defect analysis modules for pymatgen", "topics": [] }, { - "uid": "github/jakeret/tf_unet", - "url": "https://github.com/jakeret/tf_unet", - "rel": "/software/repository/github/jakeret/tf_unet", - "avatar": "https://avatars.githubusercontent.com/u/11830719?v=4", - "description": "Generic U-Net Tensorflow implementation for image segmentation", - "topics": [ - "image-segmentation", - "neural-network", - "deep-learning", - "tensorflow" - ] + "uid": "github/IPESE/REHO", + "url": "https://github.com/IPESE/REHO", + "rel": "/software/repository/github/IPESE/REHO", + "avatar": "https://avatars.githubusercontent.com/u/150812261?v=4", + "description": "Decision Support Tool for Renewable Energy Communities", + "topics": [] }, { - "uid": "github/jakeret/abcpmc", - "url": "https://github.com/jakeret/abcpmc", - "rel": "/software/repository/github/jakeret/abcpmc", - "avatar": "https://avatars.githubusercontent.com/u/11830719?v=4", - "description": "Approximate Bayesian Computation Population Monte Carlo", + "uid": "github/COBRAPROsimulator/COBRAPRO", + "url": "https://github.com/COBRAPROsimulator/COBRAPRO", + "rel": "/software/repository/github/COBRAPROsimulator/COBRAPRO", + "avatar": "https://avatars.githubusercontent.com/u/159205140?v=4", + "description": null, "topics": [] }, { - "uid": "github/samuelyeewl/specmatch-emp", - "url": "https://github.com/samuelyeewl/specmatch-emp", - "rel": "/software/repository/github/samuelyeewl/specmatch-emp", - "avatar": "https://avatars.githubusercontent.com/u/7497009?v=4", - "description": "Empirical SpecMatch", + "uid": "github/NCIP/visda", + "url": "https://github.com/NCIP/visda", + "rel": "/software/repository/github/NCIP/visda", + "avatar": "https://avatars0.githubusercontent.com/u/2387173?v=4", + "description": "VISDA (VIsual Statistical Data Analyzer) is analytical tool for cluster modeling and visualization of microarray data.", "topics": [] }, { - "uid": "github/ml-evs/matador", - "url": "https://github.com/ml-evs/matador", - "rel": "/software/repository/github/ml-evs/matador", - "avatar": "https://avatars2.githubusercontent.com/u/7916000?v=4", - "description": "\u2697\ufe0f matador is an aggregator, manipulator and runner of first-principles calculations, written with a bent towards battery \ud83d\udd0b electrode materials.", + "uid": "github/florianfranz/topo_chronia", + "url": "https://github.com/florianfranz/topo_chronia", + "rel": "/software/repository/github/florianfranz/topo_chronia", + "avatar": "https://avatars.githubusercontent.com/u/42937007?v=4", + "description": "TopoChronia: A QGIS plugin for the creation of fully quantified palaeogeographic maps", "topics": [ - "materials-science", - "python", - "computational-chemistry" + "palaeogeography", + "tectonics", + "palaeotopography", + "panalesis", + "palaeoclimate", + "plate-tectonics", + "qgis", + "qgis-plugin" ] }, { - "uid": "github/lomereiter/sambamba", - "url": "https://github.com/biod/sambamba", - "rel": "/software/repository/github/lomereiter/sambamba", - "avatar": "https://avatars.githubusercontent.com/u/3667078?v=4", - "description": "Tools for working with SAM/BAM data", + "uid": "github/leapigufpb/FuzzyClass", + "url": "https://github.com/leapigufpb/FuzzyClass", + "rel": "/software/repository/github/leapigufpb/FuzzyClass", + "avatar": "https://avatars.githubusercontent.com/u/126794664?v=4", + "description": null, "topics": [ - "sam", - "bam", - "bioinformatics" + "fuzzy", + "machine-learning", + "package", + "r" ] }, { - "uid": "github/imcgreer/simqso", - "url": "https://github.com/imcgreer/simqso", - "rel": "/software/repository/github/imcgreer/simqso", - "avatar": "https://avatars.githubusercontent.com/u/9142924?v=4", - "description": "Module for generating simulated quasar spectra", - "topics": [] + "uid": "github/fzi-forschungszentrum-informatik/TSInterpret", + "url": "https://github.com/fzi-forschungszentrum-informatik/TSInterpret", + "rel": "/software/repository/github/fzi-forschungszentrum-informatik/TSInterpret", + "avatar": "https://avatars.githubusercontent.com/u/8257565?v=4", + "description": "An Open-Source Library for the interpretability of time series classifiers", + "topics": [ + "counterfactual-explanations", + "explainable-ai", + "explainable-artificial-intelligence", + "explainable-ml", + "feature-attribution", + "interpretability", + "interpretable-machine-learning", + "interpretable-ml", + "time-series" + ] }, { - "uid": "github/PBjam-projects/PBjam", - "url": "https://github.com/PBjam-projects/PBjam", - "rel": "/software/repository/github/PBjam-projects/PBjam", - "avatar": "https://avatars.githubusercontent.com/u/229987229?v=4", - "description": "A repo for our peak baggin code and tips on jam", + "uid": "github/baiwenjia/ukbb_cardiac", + "url": "https://github.com/baiwenjia/ukbb_cardiac", + "rel": "/software/repository/github/baiwenjia/ukbb_cardiac", + "avatar": "https://avatars.githubusercontent.com/u/10883629?v=4", + "description": "Some code for processing and analysing UK Biobank cardiac MR images.", "topics": [] }, { - "uid": "github/wiki/Install-macs2", - "url": null, - "rel": "/software/repository/github/wiki/Install-macs2", - "avatar": "", - "description": "(Model Based Analysis of ChIP-Seq data) a novel algorithm for identifying transcript factor binding sites.", + "uid": "github/daniloceano/CycloPhaser", + "url": "https://github.com/daniloceano/CycloPhaser", + "rel": "/software/repository/github/daniloceano/CycloPhaser", + "avatar": "https://avatars.githubusercontent.com/u/56005607?v=4", + "description": "This package calculates extratropical cyclone life cycle phases from vorticity data using Python.", "topics": [] }, { - "uid": "github/rnajena/sugar", - "url": "https://github.com/rnajena/sugar", - "rel": "/software/repository/github/rnajena/sugar", - "avatar": "https://avatars.githubusercontent.com/u/45449800?v=4", - "description": "S*R -- A Python framework for bioinformatics", - "topics": [] + "uid": "github/daniloceano/LorenzCycleToolkit", + "url": "https://github.com/daniloceano/LorenzCycleToolkit", + "rel": "/software/repository/github/daniloceano/LorenzCycleToolkit", + "avatar": "https://avatars.githubusercontent.com/u/56005607?v=4", + "description": "Program for computing the Lorenz Energy Cycle (LEC) in a closed region of the atmosphere.", + "topics": [ + "atmospheric-science", + "data-analysis-python", + "energetics", + "meteorology", + "scientific-research" + ] }, { - "uid": "github/Huang-lab/BEACON", - "url": "https://github.com/Huang-lab/BEACON", - "rel": "/software/repository/github/Huang-lab/BEACON", - "avatar": "https://avatars.githubusercontent.com/u/43595388?v=4", + "uid": "github/mjshao06/pdifFinder", + "url": "https://github.com/mjshao06/pdifFinder", + "rel": "/software/repository/github/mjshao06/pdifFinder", + "avatar": "https://avatars.githubusercontent.com/u/91299313?v=4", "description": null, "topics": [] }, { - "uid": "github/DeltaRCM/pyDeltaRCM", - "url": "https://github.com/DeltaRCM/pyDeltaRCM", - "rel": "/software/repository/github/DeltaRCM/pyDeltaRCM", - "avatar": "https://avatars.githubusercontent.com/u/45898483?v=4", - "description": "Delta model with a reduced-complexity approach", - "topics": [] - }, - { - "uid": "github/secastel/phaser", - "url": "https://github.com/secastel/phaser", - "rel": "/software/repository/github/secastel/phaser", - "avatar": "https://avatars.githubusercontent.com/u/9827367?v=4", - "description": "phasing and Allele Specific Expression from RNA-seq", - "topics": [] - }, - { - "uid": "github/ridgelab/ExtRampOnline", - "url": "https://github.com/ridgelab/ExtRampOnline", - "rel": "/software/repository/github/ridgelab/ExtRampOnline", - "avatar": "https://avatars.githubusercontent.com/u/12803582?v=4", + "uid": "github/COINtoolbox/DRACULA", + "url": "https://github.com/COINtoolbox/DRACULA", + "rel": "/software/repository/github/COINtoolbox/DRACULA", + "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", "description": null, - "topics": [] + "topics": [ + "dimensionality-reduction", + "clustering", + "clustering-methods", + "spectra", + "som" + ] }, { - "uid": "github/ridgelab/rampAtlas", - "url": "https://github.com/ridgelab/rampAtlas", - "rel": "/software/repository/github/ridgelab/rampAtlas", - "avatar": "https://avatars.githubusercontent.com/u/12803582?v=4", - "description": "Code used to retrieve, organize, and analyze data for the Ramp Atlas", + "uid": "github/COINtoolbox/ActSNClass", + "url": "https://github.com/COINtoolbox/ActSNClass", + "rel": "/software/repository/github/COINtoolbox/ActSNClass", + "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", + "description": "Active Learning for SN photometric classification", "topics": [] }, { - "uid": "github/jczarnowski/DeepFactors", - "url": "https://github.com/jczarnowski/DeepFactors", - "rel": "/software/repository/github/jczarnowski/DeepFactors", - "avatar": "https://avatars.githubusercontent.com/u/1465574?v=4", - "description": "Real-Time Probabilistic Dense Monocular SLAM Using Compact Code Representation", + "uid": "github/COINtoolbox/CosmoPhotoz", + "url": "https://github.com/COINtoolbox/CosmoPhotoz", + "rel": "/software/repository/github/COINtoolbox/CosmoPhotoz", + "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", + "description": "Photometric redshift estimator utilising Generalized Linear Models.", "topics": [] }, { - "uid": "github/hopr-framework/PyHOPE", - "url": "https://github.com/hopr-framework/PyHOPE", - "rel": "/software/repository/github/hopr-framework/PyHOPE", - "avatar": "https://avatars.githubusercontent.com/u/72623927?v=4", - "description": "Python High-Order Preprocessing Environment", + "uid": "github/ICESat2-SlideRule/paper", + "url": "https://github.com/ICESat2-SlideRule/paper", + "rel": "/software/repository/github/ICESat2-SlideRule/paper", + "avatar": "https://avatars.githubusercontent.com/u/63428847?v=4", + "description": "JOSS paper materials", "topics": [] }, { - "uid": "github/scrook/neuroml-db", - "url": "https://github.com/scrook/neuroml-db", - "rel": "/software/repository/github/scrook/neuroml-db", - "avatar": "https://avatars.githubusercontent.com/u/2678602?v=4", - "description": "database of neuroml models", + "uid": "github/agsreejith/CONTROL", + "url": "https://github.com/agsreejith/CONTROL", + "rel": "/software/repository/github/agsreejith/CONTROL", + "avatar": "https://avatars.githubusercontent.com/u/32366864?v=4", + "description": "V1.0 of CUTE data reduction pipeline", "topics": [] }, { - "uid": "github/rqtl/qtl2", - "url": "https://github.com/rqtl/qtl2", - "rel": "/software/repository/github/rqtl/qtl2", - "avatar": "https://avatars.githubusercontent.com/u/9142954?v=4", - "description": "QTL analysis software for high-dimensional data and complex cross designs", - "topics": [] + "uid": "github/cds-astro/mocpy", + "url": "https://github.com/cds-astro/mocpy", + "rel": "/software/repository/github/cds-astro/mocpy", + "avatar": "https://avatars.githubusercontent.com/u/26145382?v=4", + "description": "Python library to easily create and manipulate MOCs (Multi-Order Coverage maps)", + "topics": [ + "astronomy", + "astronomy-astrophysics", + "tesselation", + "healpix", + "moc", + "astrophysics", + "astropy-affiliated", + "gravitational-waves", + "open-source", + "python" + ] }, { - "uid": "github/kambrian/SubGen", - "url": "https://github.com/Kambrian/SubGen", - "rel": "/software/repository/github/kambrian/SubGen", - "avatar": "https://avatars.githubusercontent.com/u/7944948?v=4", - "description": "a fast subhalo sampler", + "uid": "github/mmelwani/AccretR", + "url": "https://github.com/mmelwani/AccretR", + "rel": "/software/repository/github/mmelwani/AccretR", + "avatar": "https://avatars.githubusercontent.com/u/38257523?v=4", + "description": "A planet accretion program that calculates mass, radius and composition along a growth track", "topics": [] }, { - "uid": "github/LucindaLilley/PIRATES", - "url": "https://github.com/LucindaLilley/PIRATES", - "rel": "/software/repository/github/LucindaLilley/PIRATES", - "avatar": "https://avatars.githubusercontent.com/u/82076657?v=4", - "description": "Code for PIRATES Image Reconstruction Algorithm", + "uid": "github/Muszeb/ENQUIRE", + "url": "https://github.com/Muszeb/ENQUIRE", + "rel": "/software/repository/github/Muszeb/ENQUIRE", + "avatar": "https://avatars.githubusercontent.com/u/83875826?v=4", + "description": "Expanding Networks by Querying Unexpectedly Inter-Related Entities", "topics": [] }, { - "uid": "github/ITA-Solar/rh", - "url": "https://github.com/ITA-Solar/rh", - "rel": "/software/repository/github/ITA-Solar/rh", - "avatar": "https://avatars.githubusercontent.com/u/8429185?v=4", - "description": "RH 1.5D", - "topics": [] + "uid": "github/YonghuiDong/RawHummus", + "url": "https://github.com/YonghuiDong/RawHummus", + "rel": "/software/repository/github/YonghuiDong/RawHummus", + "avatar": "https://avatars.githubusercontent.com/u/22663189?v=4", + "description": "QC Check Tool for Metabolomics", + "topics": [ + "metabolomics", + "lcms", + "orbitrap", + "quality-control" + ] }, { - "uid": "github/astrom-tom/dfitspy", - "url": "https://github.com/astrom-tom/dfitspy", - "rel": "/software/repository/github/astrom-tom/dfitspy", - "avatar": "https://avatars.githubusercontent.com/u/26314073?v=4", - "description": null, + "uid": "github/creaneroDIAS/beamModelTester", + "url": "https://github.com/creaneroDIAS/beamModelTester", + "rel": "/software/repository/github/creaneroDIAS/beamModelTester", + "avatar": "https://avatars.githubusercontent.com/u/35535656?v=4", + "description": "a general-purpose tool for evaluation of models of radio telescope beams.", "topics": [] }, { - "uid": "github/astrom-tom/specstack", - "url": "https://github.com/astrom-tom/specstack", - "rel": "/software/repository/github/astrom-tom/specstack", - "avatar": "https://avatars.githubusercontent.com/u/26314073?v=4", - "description": "Simple spectral stacking from command line interface", + "uid": "github/deweylab/RSEM", + "url": "https://github.com/deweylab/RSEM", + "rel": "/software/repository/github/deweylab/RSEM", + "avatar": "https://avatars.githubusercontent.com/u/8928563?v=4", + "description": "RSEM: accurate quantification of gene and isoform expression from RNA-Seq data", "topics": [] }, { - "uid": "github/Stat-Cook/deident", - "url": "https://github.com/Stat-Cook/deident", - "rel": "/software/repository/github/Stat-Cook/deident", - "avatar": "https://avatars.githubusercontent.com/u/51404549?v=4", - "description": null, - "topics": [] + "uid": "github/ashleychontos/pySYD", + "url": "https://github.com/ashleychontos/pySYD", + "rel": "/software/repository/github/ashleychontos/pySYD", + "avatar": "https://avatars.githubusercontent.com/u/13820495?v=4", + "description": "automated measurements of global asteroseismic parameters", + "topics": [ + "time-series-analysis", + "asteroseismology", + "power-spectrum-analysis", + "photometry", + "kepler", + "k2", + "tess", + "astronomy", + "astrophysics", + "fundamental-analysis", + "stars", + "stellar-parameters", + "stellar-physics", + "stellar-astrophysics", + "python" + ] }, { - "uid": "github/bio2byte/constava", - "url": "https://github.com/Bio2Byte/constava", - "rel": "/software/repository/github/bio2byte/constava", - "avatar": "https://avatars.githubusercontent.com/u/97734147?v=4", - "description": "Constava analyzes conformational ensembles calculating conformational state propensities and conformational state variability.", + "uid": "github/dokkum/maskfill", + "url": "https://github.com/dokkum/maskfill", + "rel": "/software/repository/github/dokkum/maskfill", + "avatar": "https://avatars.githubusercontent.com/u/30157643?v=4", + "description": "Fill in masked values in an image", "topics": [] }, { - "uid": "github/fannyhb/fargene", - "url": "https://github.com/fannyhb/fargene", - "rel": "/software/repository/github/fannyhb/fargene", - "avatar": "https://avatars.githubusercontent.com/u/25587784?v=4", - "description": null, + "uid": "github/GijsMulders/epos", + "url": "https://github.com/GijsMulders/epos", + "rel": "/software/repository/github/GijsMulders/epos", + "avatar": "https://avatars.githubusercontent.com/u/13457058?v=4", + "description": "Exoplanet Population Observation Simulator", "topics": [] }, { - "uid": "github/CM2S/piglot", - "url": "https://github.com/CM2S/piglot", - "rel": "/software/repository/github/CM2S/piglot", - "avatar": "https://avatars.githubusercontent.com/u/25201360?v=4", - "description": "A package for the optimisation of numerical responses", + "uid": "github/reizio/reiz.io", + "url": "https://github.com/reizio/reiz.io", + "rel": "/software/repository/github/reizio/reiz.io", + "avatar": "https://avatars.githubusercontent.com/u/71179352?v=4", + "description": "Structural Source Code Search Engine", "topics": [ - "python", - "parameter-identification", - "optimisation", - "bayesian-optimization", - "physics-solvers" + "source", + "source-code", + "search-engine", + "python-ast", + "ast-matcher" ] }, { - "uid": "github/vsbuffalo/scythe", - "url": "https://github.com/vsbuffalo/scythe", - "rel": "/software/repository/github/vsbuffalo/scythe", - "avatar": "https://avatars.githubusercontent.com/u/160549?v=4", - "description": "A 3'-end adapter contaminant trimmer", - "topics": [] + "uid": "github/i4Ds/Karabo-Pipeline", + "url": "https://github.com/i4Ds/Karabo-Pipeline", + "rel": "/software/repository/github/i4Ds/Karabo-Pipeline", + "avatar": "https://avatars.githubusercontent.com/u/9019602?v=4", + "description": "The Karabo Pipeline can be used as Digital Twin for SKA", + "topics": [ + "ska" + ] }, { - "uid": "github/aztekas-code/aztekas-main", - "url": "https://github.com/aztekas-code/aztekas-main", - "rel": "/software/repository/github/aztekas-code/aztekas-main", - "avatar": "https://avatars.githubusercontent.com/u/46830656?v=4", - "description": "GRHD numerical code ", + "uid": "github/SAMI-Galaxy-Survey/sami", + "url": "https://github.com/SAMI-Galaxy-Survey/sami", + "rel": "/software/repository/github/SAMI-Galaxy-Survey/sami", + "avatar": "https://avatars.githubusercontent.com/u/64873436?v=4", + "description": "Data reduction pipeline for the SAMI instrument", "topics": [] }, { - "uid": "github/VegeWaterDynamics/motrainer", - "url": "https://github.com/VegeWaterDynamics/motrainer", - "rel": "/software/repository/github/VegeWaterDynamics/motrainer", - "avatar": "https://avatars.githubusercontent.com/u/62881306?v=4", - "description": "Distributed Measurement Operator Trainer for Data Assimilation Applications", + "uid": "github/nekokoe/Plasmer", + "url": "https://github.com/nekokoe/Plasmer", + "rel": "/software/repository/github/nekokoe/Plasmer", + "avatar": "https://avatars.githubusercontent.com/u/3713987?v=4", + "description": "An accurate and sensitive bacterial plasmid identification tool based on deep machine-learning of shared k-mers and genomic features.", "topics": [ - "data-assimilation", - "distributed-computing", - "kalman-filter", - "machine-learning" + "bioinformatics", + "plasmid" ] }, { - "uid": "github/Mec-iS/arrowspace-rs", - "url": "https://github.com/Mec-iS/arrowspace-rs", - "rel": "/software/repository/github/Mec-iS/arrowspace-rs", - "avatar": "https://avatars.githubusercontent.com/u/3146196?v=4", - "description": null, - "topics": [] + "uid": "github/sciris/sciris", + "url": "https://github.com/sciris/sciris", + "rel": "/software/repository/github/sciris/sciris", + "avatar": "https://avatars.githubusercontent.com/u/43378155?v=4", + "description": "Fast, flexible tools to simplify scientific Python", + "topics": [ + "python", + "computational-science", + "containers", + "data-science", + "matplotlib", + "numpy", + "parallelization", + "plotting", + "scientific-computing", + "utilities" + ] }, { - "uid": "github/shadden/celmech", - "url": "https://github.com/shadden/celmech", - "rel": "/software/repository/github/shadden/celmech", - "avatar": "https://avatars.githubusercontent.com/u/1007148?v=4", - "description": "Sandbox for celestial mechanics calculations", + "uid": "github/tberlok/paicos", + "url": "https://github.com/tberlok/paicos", + "rel": "/software/repository/github/tberlok/paicos", + "avatar": "https://avatars.githubusercontent.com/u/10655136?v=4", + "description": "An object-oriented Python package for analysis of (cosmological) simulations performed with Arepo", "topics": [] }, { - "uid": "github/jiahecui/SenAOReFoc", - "url": "https://github.com/jiahecui/SenAOReFoc", - "rel": "/software/repository/github/jiahecui/SenAOReFoc", - "avatar": "https://avatars.githubusercontent.com/u/44090103?v=4", - "description": "A closed-loop sensorbased adaptive optics and remote focusing control software that works with a deformable mirror and a Shack-Hartmann wavefront sensor.", + "uid": "github/phil-mansfield/shellfish", + "url": "https://github.com/phil-mansfield/shellfish", + "rel": "/software/repository/github/phil-mansfield/shellfish", + "avatar": "https://avatars.githubusercontent.com/u/4722826?v=4", + "description": "A Go-based package which identifies the splashback shell of halos from N-body simulations.", "topics": [] }, { - "uid": "github/trixi-framework/HOHQMesh", - "url": "https://github.com/trixi-framework/HOHQMesh", - "rel": "/software/repository/github/trixi-framework/HOHQMesh", - "avatar": "https://avatars.githubusercontent.com/u/67895161?v=4", - "description": "High Order Hex-Quad Mesh (HOHQMesh) package to automatically generate all-quadrilateral meshes with high order boundary information.", + "uid": "github/phil-mansfield/gotetra", + "url": "https://github.com/phil-mansfield/gotetra", + "rel": "/software/repository/github/phil-mansfield/gotetra", + "avatar": "https://avatars.githubusercontent.com/u/4722826?v=4", + "description": "A Go-based tracking of cosmic velocity fields through the use of tetrahedra", "topics": [] }, { - "uid": "github/trixi-framework/TrixiParticles.jl", - "url": "https://github.com/trixi-framework/TrixiParticles.jl", - "rel": "/software/repository/github/trixi-framework/TrixiParticles.jl", - "avatar": "https://avatars.githubusercontent.com/u/67895161?v=4", - "description": "TrixiParticles.jl: Particle-based multiphysics simulations in Julia", + "uid": "github/slcs-jsc/mptrac", + "url": "https://github.com/slcs-jsc/mptrac", + "rel": "/software/repository/github/slcs-jsc/mptrac", + "avatar": "https://avatars.githubusercontent.com/u/14200814?v=4", + "description": "Massive-Parallel Trajectory Calculations (MPTRAC) is a Lagrangian particle dispersion model for the analysis of atmospheric transport processes in the free troposphere and stratosphere.", "topics": [ - "julia", - "multiphysics", - "simulation", - "smoothed-particle-hydrodynamics" + "atmospheric-modelling", + "dispersion-model", + "stratosphere", + "trajectories", + "dispersion", + "atmospheric-science", + "climate", + "climate-science", + "troposphere", + "meteorology", + "high-performance-computing" ] }, { - "uid": "github/YuSugihara/MutMap", - "url": "https://github.com/YuSugihara/MutMap", - "rel": "/software/repository/github/YuSugihara/MutMap", - "avatar": "https://avatars.githubusercontent.com/u/34593586?v=4", - "description": "MutMap pipeline to identify causative mutations responsible for a phenotype", - "topics": [] - }, - { - "uid": "github/anchal-009/SAVED21cm", - "url": "https://github.com/anchal-009/SAVED21cm", - "rel": "/software/repository/github/anchal-009/SAVED21cm", - "avatar": "https://avatars.githubusercontent.com/u/79319338?v=4", - "description": "A toolbox for extracting the 21cm signal from the simulated mock observation for REACH.", - "topics": [] - }, - { - "uid": "github/AmruteLab/PyChelator", - "url": "https://github.com/AmruteLab/PyChelator", - "rel": "/software/repository/github/AmruteLab/PyChelator", - "avatar": "https://avatars.githubusercontent.com/u/146719149?v=4", - "description": "PyChelator performs metal chelator calculations taking into account pH, temperature, and ionic strength", + "uid": "github/MJTemple/qsogen", + "url": "https://github.com/MJTemple/qsogen", + "rel": "/software/repository/github/MJTemple/qsogen", + "avatar": "https://avatars.githubusercontent.com/u/34741764?v=4", + "description": "Model quasar SEDs", "topics": [] }, { - "uid": "github/JLBLine/PUMA", - "url": "https://github.com/JLBLine/PUMA", - "rel": "/software/repository/github/JLBLine/PUMA", - "avatar": "https://avatars.githubusercontent.com/u/7925164?v=4", - "description": null, - "topics": [] + "uid": "github/BlueBrain/BlueCelluLab", + "url": "https://github.com/BlueBrain/BlueCelluLab", + "rel": "/software/repository/github/BlueBrain/BlueCelluLab", + "avatar": "https://avatars.githubusercontent.com/u/1479142?v=4", + "description": "Biologically detailed neural network simulations and analysis API", + "topics": [ + "biology", + "brain", + "cell", + "neural-network", + "neuron", + "neuroscience", + "python", + "simulation", + "circuit", + "emodel", + "api", + "connection", + "network" + ] }, { - "uid": "github/JLBLine/WODEN", - "url": "https://github.com/JLBLine/WODEN", - "rel": "/software/repository/github/JLBLine/WODEN", - "avatar": "https://avatars.githubusercontent.com/u/7925164?v=4", - "description": "CUDA code designed to simulate interferometric data using point, Gaussian, and shapelet sky models", + "uid": "github/sauddy/GRINN", + "url": "https://github.com/sauddy/GRINN", + "rel": "/software/repository/github/sauddy/GRINN", + "avatar": "https://avatars.githubusercontent.com/u/46558389?v=4", + "description": "We solve hydrodynamical equation including self-gravitating using Physics Informed Neural Networks. We study Jeans instability in self-gravitating gas in star forming molecular clouds", "topics": [] }, { - "uid": "github/ExoCTK/exoctk", - "url": "https://github.com/ExoCTK/exoctk", - "rel": "/software/repository/github/ExoCTK/exoctk", - "avatar": "https://avatars.githubusercontent.com/u/24390627?v=4", - "description": "The Exoplanet Characterization Tool Kit", + "uid": "github/alercebroker/ATAT", + "url": "https://github.com/alercebroker/ATAT", + "rel": "/software/repository/github/alercebroker/ATAT", + "avatar": "https://avatars.githubusercontent.com/u/46603914?v=4", + "description": "Astronomical Transformer for time series And Tabular data", "topics": [] }, { - "uid": "github/CEED/libCEED", - "url": "https://github.com/CEED/libCEED", - "rel": "/software/repository/github/CEED/libCEED", - "avatar": "https://avatars.githubusercontent.com/u/23178852?v=4", - "description": "CEED Library: Code for Efficient Extensible Discretizations", + "uid": "github/dominic-chang/Krang.jl", + "url": "https://github.com/dominic-chang/Krang.jl", + "rel": "/software/repository/github/dominic-chang/Krang.jl", + "avatar": "https://avatars.githubusercontent.com/u/12768908?v=4", + "description": "Fast analytic raytracing around Kerr black holes", "topics": [ - "ceed", - "high-order", - "exascale-computing", - "api", - "ecp", - "high-performance-computing" + "black-hole", + "general-relativity", + "julia", + "kerr", + "raytracer", + "raytracing", + "automatic-differentiation", + "gpu-acceleration" ] }, { - "uid": "github/pynbody/tangos", - "url": "https://github.com/pynbody/tangos", - "rel": "/software/repository/github/pynbody/tangos", - "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", - "description": "The Agile Numerical Galaxy Organisation System", + "uid": "github/tumcms/Open-Infra-Platform", + "url": "https://github.com/tumcms/Open-Infra-Platform", + "rel": "/software/repository/github/tumcms/Open-Infra-Platform", + "avatar": "https://avatars.githubusercontent.com/u/13763357?v=4", + "description": "This is the official repository of the open-source Open Infra Platform software (as of April 2020).", "topics": [ - "python", - "cosmology", - "simulation" + "ifc", + "infrastructure", + "boost", + "point-cloud", + "building-information-modelling", + "okstra" ] }, { - "uid": "github/pynbody/pynbody", - "url": "https://github.com/pynbody/pynbody", - "rel": "/software/repository/github/pynbody/pynbody", - "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", - "description": "N-body and hydro analysis tools for Python 3. (Older versions support Python 2.)", + "uid": "github/rega-cev/virulign", + "url": "https://github.com/rega-cev/virulign", + "rel": "/software/repository/github/rega-cev/virulign", + "avatar": "https://avatars.githubusercontent.com/u/6450884?v=4", + "description": "VIRULIGN: fast codon-correct alignment and annotation of viral genomes", "topics": [] }, { - "uid": "github/pynbody/genetIC", - "url": "https://github.com/pynbody/genetIC", - "rel": "/software/repository/github/pynbody/genetIC", - "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", - "description": "The GM initial conditions generator", + "uid": "github/pacificbiosciences/bam2fastx", + "url": "https://github.com/PacificBiosciences/bam2fastx", + "rel": "/software/repository/github/pacificbiosciences/bam2fastx", + "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", + "description": "Converting and demultiplexing of PacBio BAM files into gzipped fasta and fastq files.", "topics": [] }, { - "uid": "github/NctuICLab/PredCRP", - "url": "https://github.com/NctuICLab/PredCRP", - "rel": "/software/repository/github/NctuICLab/PredCRP", - "avatar": "https://avatars.githubusercontent.com/u/25690048?v=4", - "description": "Predicting the regulatory role of CRP transcription factor in Escherichia coli ", - "topics": [ - "crp", - "escherichia-coli", - "libsvm", - "feature-selection", - "predcrp", - "transcription-factor" - ] + "uid": "github/kendomaniac/rCASC", + "url": "https://github.com/kendomaniac/rCASC", + "rel": "/software/repository/github/kendomaniac/rCASC", + "avatar": "https://avatars2.githubusercontent.com/u/10886147?v=4", + "description": "rCASC: reproducible Classification Analysis of Single Cell Sequencing Data", + "topics": [] }, { - "uid": "github/nemesiscode/radtrancode", - "url": "https://github.com/nemesiscode/radtrancode", - "rel": "/software/repository/github/nemesiscode/radtrancode", - "avatar": "https://avatars.githubusercontent.com/u/47110639?v=4", - "description": "This is the repository of the NEMESIS/RADTRANS project. It is described on the associated web page listed here.", + "uid": "github/kendomaniac/docker4seq", + "url": "https://github.com/kendomaniac/docker4seq", + "rel": "/software/repository/github/kendomaniac/docker4seq", + "avatar": "https://avatars2.githubusercontent.com/u/10886147?v=4", + "description": "Running NGS computing demanding applications, e.g reads mapping and counting, wrapped in docker containers.", "topics": [] }, { - "uid": "github/CmPA/iPic3D", - "url": "https://github.com/CmPA/iPic3D", - "rel": "/software/repository/github/CmPA/iPic3D", - "avatar": "https://avatars.githubusercontent.com/u/4458477?v=4", - "description": "Particle-in-Cell code using the implicit moment method", + "uid": "github/jruffio/breads", + "url": "https://github.com/jruffio/breads", + "rel": "/software/repository/github/jruffio/breads", + "avatar": "https://avatars.githubusercontent.com/u/14828518?v=4", + "description": "Broad Repository for Exoplanet Analysis and Discovery", "topics": [] }, { - "uid": "github/jlenain/flaapluc", - "url": "https://github.com/jlenain/flaapluc", - "rel": "/software/repository/github/jlenain/flaapluc", - "avatar": "https://avatars.githubusercontent.com/u/5399958?v=4", - "description": "Dirty but quick Fermi-LAT analysis", + "uid": "github/TianlaiProject/tlpipe", + "url": "https://github.com/TianlaiProject/tlpipe", + "rel": "/software/repository/github/TianlaiProject/tlpipe", + "avatar": "https://avatars.githubusercontent.com/u/15796092?v=4", + "description": "The Tianlai pipeline.", "topics": [] }, { - "uid": "github/rbturnbull/ausdex", - "url": "https://github.com/rbturnbull/ausdex", - "rel": "/software/repository/github/rbturnbull/ausdex", - "avatar": "https://avatars.githubusercontent.com/u/43091272?v=4", - "description": "A Python package for adjusting Australian dollars for inflation", + "uid": "github/WilliamLwj/PyXAB", + "url": "https://github.com/WilliamLwj/PyXAB", + "rel": "/software/repository/github/WilliamLwj/PyXAB", + "avatar": "https://avatars.githubusercontent.com/u/28475711?v=4", + "description": "PyXAB - A Python Library for X-Armed Bandit and Online Blackbox Optimization Algorithms", "topics": [ - "inflation", - "australia" + "algorithm", + "bandit-algorithms", + "blackbox-optimization", + "optimization", + "lipschitz-bandit", + "hyperparameter-optimization", + "hyperparameter-tuning", + "reinforcement-learning", + "data-science", + "machine-learning-algorithms", + "online-learning", + "continuous-armed-bandit", + "x-armed-bandit", + "automl", + "machine-learning", + "optimization-algorithms" ] }, { - "uid": "github/orcasgit/python-fitbit", - "url": "https://github.com/orcasgit/python-fitbit", - "rel": "/software/repository/github/orcasgit/python-fitbit", - "avatar": "https://avatars.githubusercontent.com/u/9833?v=4", - "description": "Fitbit API Python Client Implementation", + "uid": "github/cmateu/galstreams", + "url": "https://github.com/cmateu/galstreams", + "rel": "/software/repository/github/cmateu/galstreams", + "avatar": "https://avatars.githubusercontent.com/u/4968584?v=4", + "description": "Milky Way Streams Footprint Library and Toolkit for Python", "topics": [] }, { - "uid": "github/tgrimes/SeqNet", - "url": "https://github.com/tgrimes/SeqNet", - "rel": "/software/repository/github/tgrimes/SeqNet", - "avatar": "https://avatars.githubusercontent.com/u/16945884?v=4", - "description": "An R package for simulating RNA-sequence datasets from regulatory networks", + "uid": "github/cmateu/PyMGC3", + "url": "https://github.com/cmateu/PyMGC3", + "rel": "/software/repository/github/cmateu/PyMGC3", + "avatar": "https://avatars.githubusercontent.com/u/4968584?v=4", + "description": "Python toolkit for mGC3 method", "topics": [] }, { - "uid": "github/jessecambon/tidygeocoder", - "url": "https://github.com/jessecambon/tidygeocoder", - "rel": "/software/repository/github/jessecambon/tidygeocoder", - "avatar": "https://avatars.githubusercontent.com/u/31526206?v=4", - "description": "Geocoding Made Easy", - "topics": [ - "r", - "geocoding", - "tidyverse", - "rstats", - "rspatial" - ] + "uid": "github/ch-var/SMART", + "url": "https://github.com/ch-var/SMART", + "rel": "/software/repository/github/ch-var/SMART", + "avatar": "https://avatars.githubusercontent.com/u/155535455?v=4", + "description": "SMART (Spectral energy distributions Markov chain Analysis with Radiative Transfer models) is an open-source tool that implements a Bayesian Markov chain Monte Carlo (MCMC) method to fit the ultraviolet to millimetre spectral energy distributions (SEDs) of galaxies exclusively with radiative transfer models.", + "topics": [] }, { - "uid": "github/pokynmr/ipick", - "url": "https://github.com/pokynmr/iPick", - "rel": "/software/repository/github/pokynmr/ipick", - "avatar": "https://avatars.githubusercontent.com/u/46821344?v=4", - "description": "Multiprocessing Peak Picking Software for UCSF NMR Spectra", + "uid": "github/Ciela-Institute/caustics", + "url": "https://github.com/Ciela-Institute/caustics", + "rel": "/software/repository/github/Ciela-Institute/caustics", + "avatar": "https://avatars.githubusercontent.com/u/110192370?v=4", + "description": "A gravitational lensing simulator for the machine learning era.", "topics": [ - "peaks", - "nmrfam-sparky", - "reliability-score", - "noise-peaks", - "spectra", - "nmr" + "gravitational-lensing", + "pytorch" ] }, { - "uid": "github/scikit-learn-contrib/hdbscan", - "url": "https://github.com/scikit-learn-contrib/hdbscan", - "rel": "/software/repository/github/scikit-learn-contrib/hdbscan", - "avatar": "https://avatars.githubusercontent.com/u/17349883?v=4", - "description": "A high performance implementation of HDBSCAN clustering.", + "uid": "github/peterk87/sistr_cmd", + "url": "https://github.com/phac-nml/sistr_cmd", + "rel": "/software/repository/github/peterk87/sistr_cmd", + "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", + "description": "SISTR (Salmonella In Silico Typing Resource) command-line tool", "topics": [ - "machine-learning", - "machine-learning-algorithms", - "clustering", - "clustering-algorithm", - "cluster-analysis", - "clustering-evaluation" + "bioinformatics", + "serotyping", + "salmonella", + "cgmlst", + "sistr" ] }, { - "uid": "github/marieBvr/virAnnot", - "url": "https://github.com/marieBvr/virAnnot", - "rel": "/software/repository/github/marieBvr/virAnnot", - "avatar": "https://avatars2.githubusercontent.com/u/20929578?v=4", - "description": null, + "uid": "github/amiralih/MembraneAnalysis.jl", + "url": "https://github.com/amiralih/MembraneAnalysis.jl", + "rel": "/software/repository/github/amiralih/MembraneAnalysis.jl", + "avatar": "https://avatars.githubusercontent.com/u/13348763?v=4", + "description": "A package for analyzing molecular dynamics simulations of lipid membranes", "topics": [] }, { - "uid": "github/liulei/volks2", - "url": "https://github.com/liulei/volks2", - "rel": "/software/repository/github/liulei/volks2", - "avatar": "https://avatars.githubusercontent.com/u/95010?v=4", - "description": "VLBI Observation for single pulse Localization Keen Searcher, 2nd release", + "uid": "github/LLNL/popclass", + "url": "https://github.com/LLNL/popclass", + "rel": "/software/repository/github/LLNL/popclass", + "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", + "description": "A python package that allows flexible, probabilistic classification of a microlensing event", "topics": [] }, { - "uid": "github/konradhoeffner/hdt", - "url": "https://github.com/KonradHoeffner/hdt", - "rel": "/software/repository/github/konradhoeffner/hdt", - "avatar": "https://avatars.githubusercontent.com/u/839577?v=4", - "description": "Library for the Header Dictionary Triples (HDT) compression file format for RDF data.", - "topics": [] + "uid": "github/LLNL/echemfem", + "url": "https://github.com/LLNL/echemfem", + "rel": "/software/repository/github/LLNL/echemfem", + "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", + "description": "Finite Element Method for Electrochemical Transport (EchemFEM)", + "topics": [ + "discontinuous-galerkin", + "electrochemistry", + "finite-element-method", + "firedrake", + "python" + ] }, { - "uid": "github/jhkorhonen/MOODS", - "url": "https://github.com/jhkorhonen/MOODS", - "rel": "/software/repository/github/jhkorhonen/MOODS", - "avatar": "https://avatars.githubusercontent.com/u/3216254?v=4", - "description": "MOODS: Motif Occurrence Detection Suite", - "topics": [] + "uid": "github/LLNL/SSAPy", + "url": "https://github.com/LLNL/SSAPy", + "rel": "/software/repository/github/LLNL/SSAPy", + "avatar": "https://avatars.githubusercontent.com/u/5921419?v=4", + "description": "A Python package allowing for fast and precise orbital modeling.", + "topics": [ + "application", + "python" + ] }, { - "uid": "github/Muszeb/ENQUIRE", - "url": "https://github.com/Muszeb/ENQUIRE", - "rel": "/software/repository/github/Muszeb/ENQUIRE", - "avatar": "https://avatars.githubusercontent.com/u/83875826?v=4", - "description": "Expanding Networks by Querying Unexpectedly Inter-Related Entities", + "uid": "github/hippylib/soupy", + "url": "https://github.com/hippylib/soupy", + "rel": "/software/repository/github/hippylib/soupy", + "avatar": "https://avatars.githubusercontent.com/u/16692537?v=4", + "description": "Stochastic Optimization under Uncertainty in Python.", "topics": [] }, { - "uid": "github/hetalang/heta-compiler", - "url": "https://github.com/hetalang/heta-compiler", - "rel": "/software/repository/github/hetalang/heta-compiler", - "avatar": "https://avatars.githubusercontent.com/u/56396891?v=4", - "description": "Software tool for the compilation of Heta-based QSP modeling platform", - "topics": [ - "pharmacokinetics", - "pharmacometrics", - "pharmacodynamics", - "systems-pharmacology", - "systems-biology" - ] + "uid": "github/bretthandrews/flexCE", + "url": "https://github.com/bretthandrews/flexce", + "rel": "/software/repository/github/bretthandrews/flexCE", + "avatar": "https://avatars.githubusercontent.com/u/12723826?v=4", + "description": "A flexible Chemical Evolution model in python", + "topics": [] }, { - "uid": "github/jfowkes/pycutest", - "url": "https://github.com/jfowkes/pycutest", - "rel": "/software/repository/github/jfowkes/pycutest", - "avatar": "https://avatars.githubusercontent.com/u/5586192?v=4", - "description": "Python interface to CUTEst", + "uid": "github/qmarcou/IGoR", + "url": "https://github.com/qmarcou/IGoR", + "rel": "/software/repository/github/qmarcou/IGoR", + "avatar": "https://avatars.githubusercontent.com/u/18257721?v=4", + "description": "IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:", "topics": [ - "optimization-tools" + "inference", + "igor", + "recombination", + "immunology", + "simulation", + "hypermutation" ] }, { - "uid": "github/JeffLuo9/Hep_Ploidy_protocol", - "url": "https://github.com/JeffLuo9/Hep_Ploidy_protocol", - "rel": "/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", - "avatar": "https://avatars.githubusercontent.com/u/218604512?v=4", - "description": "Hepatocyte ploidy protocol", + "uid": "github/MetaboComp/TriplotGUI", + "url": "https://github.com/MetaboComp/TriplotGUI", + "rel": "/software/repository/github/MetaboComp/TriplotGUI", + "avatar": "https://avatars.githubusercontent.com/u/110531427?v=4", + "description": null, "topics": [] }, { - "uid": "github/emrecdem/emo-spectre", - "url": "https://github.com/emrecdem/emo-spectre", - "rel": "/software/repository/github/emrecdem/emo-spectre", - "avatar": "https://avatars.githubusercontent.com/u/33319427?v=4", - "description": null, + "uid": "github/birnstiel/two-pop-py", + "url": "https://github.com/birnstiel/two-pop-py", + "rel": "/software/repository/github/birnstiel/two-pop-py", + "avatar": "https://avatars.githubusercontent.com/u/3997171?v=4", + "description": "Implementation of the 2-population model for dust evolution in protoplanetary disks after Birnstiel, Klahr, & Ercolano, A&A 2012", "topics": [] }, { - "uid": "github/loosolab/TOBIAS", - "url": "https://github.com/loosolab/TOBIAS", - "rel": "/software/repository/github/loosolab/TOBIAS", - "avatar": "https://avatars.githubusercontent.com/u/12712804?v=4", - "description": "Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal ", - "topics": [ - "bioinformatics", - "atac-seq", - "footprinting" - ] + "uid": "github/PRIS-CV/DS-UI", + "url": "https://github.com/PRIS-CV/DS-UI", + "rel": "/software/repository/github/PRIS-CV/DS-UI", + "avatar": "https://avatars.githubusercontent.com/u/64245328?v=4", + "description": "DS-UI: Dual-Supervised Mixture of Gaussian Mixture Models for Uncertainty Inference in Image Recognition (IEEE TIP 2021)", + "topics": [] }, { - "uid": "github/cpinte/mcfost", - "url": "https://github.com/cpinte/mcfost", - "rel": "/software/repository/github/cpinte/mcfost", - "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", - "description": "MCFOST radiative transfer code", + "uid": "github/SJaffa/Jplots", + "url": "https://github.com/SJaffa/Jplots", + "rel": "/software/repository/github/SJaffa/Jplots", + "avatar": "https://avatars.githubusercontent.com/u/13678317?v=4", + "description": "Astrophysical data analysis tool: quantifying the shape of pixelated structures using moments", "topics": [ "astronomy", "astrophysics", - "astrophysical-simulation", - "radiative-transfer", - "fortran" + "structure", + "dendrogram", + "molecular-clouds", + "filaments" ] }, { - "uid": "github/cpinte/pymcfost", - "url": "https://github.com/cpinte/pymcfost", - "rel": "/software/repository/github/cpinte/pymcfost", - "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", - "description": "python interface to the 3D radiative transfer code mcfost", + "uid": "github/lpfworld/DMPNet", + "url": "https://github.com/lpfworld/DMPNet", + "rel": "/software/repository/github/lpfworld/DMPNet", + "avatar": "https://avatars.githubusercontent.com/u/22807794?v=4", + "description": "DMPNet", "topics": [] }, { - "uid": "github/cpinte/casa_cube", - "url": "https://github.com/cpinte/casa_cube", - "rel": "/software/repository/github/cpinte/casa_cube", - "avatar": "https://avatars.githubusercontent.com/u/4163533?v=4", - "description": "python tool to display and analysis astronomical data cubes", + "uid": "github/umbralcalc/foxi", + "url": "https://github.com/umbralcalc/foxi", + "rel": "/software/repository/github/umbralcalc/foxi", + "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", + "description": "Futuristic Observations and their eXpected Information: package for automated computation of a suite of information-theoretic and Bayesian expected utilities for deciding between scientific experimental designs ", "topics": [] }, { - "uid": "github/trivnguyen/florah", - "url": "https://github.com/trivnguyen/florah", - "rel": "/software/repository/github/trivnguyen/florah", - "avatar": "https://avatars.githubusercontent.com/u/27309647?v=4", - "description": "Generate galaxy merger tree with machine learning", + "uid": "github/umbralcalc/nfield", + "url": "https://github.com/umbralcalc/nfield", + "rel": "/software/repository/github/umbralcalc/nfield", + "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", + "description": "Code for generally computing IR correlators during inflation with n-field dimensions - makes use of the formalism of Stochastic Inflation and hence 'mlsolver'", "topics": [] }, { - "uid": "github/logan-pearce/lofti_gaia", - "url": "https://github.com/logan-pearce/lofti_gaia", - "rel": "/software/repository/github/logan-pearce/lofti_gaia", - "avatar": "https://avatars.githubusercontent.com/u/27641243?v=4", - "description": "Python package for orbit fitting with Gaia astrometry", + "uid": "github/umbralcalc/helmpy", + "url": "https://github.com/umbralcalc/helmpy", + "rel": "/software/repository/github/umbralcalc/helmpy", + "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", + "description": "An all-in-one python class for optimised stochastic simulation and forecasting the effect of mass drug administration on helminth (parasitic worm) disease transmission", "topics": [] }, { - "uid": "github/mazzalab/pyntacle", - "url": "https://github.com/mazzalab/pyntacle", - "rel": "/software/repository/github/mazzalab/pyntacle", - "avatar": "https://avatars0.githubusercontent.com/u/10012441?v=4", - "description": "A high performance python package for network analysis based on non canonical metrics", + "uid": "github/giswqs/geemap", + "url": "https://github.com/giswqs/geemap", + "rel": "/software/repository/github/giswqs/geemap", + "avatar": "https://avatars1.githubusercontent.com/u/5016453?v=4", + "description": "A Python package for interactive mapping with Google Earth Engine, ipyleaflet, and ipywidgets", + "topics": [ + "google-earth-engine", + "gis", + "remote-sensing", + "image-processing", + "python", + "jupyter-notebook", + "ipyleaflet", + "mapping", + "earth-engine" + ] + }, + { + "uid": "github/giswqs/leafmap", + "url": "https://github.com/giswqs/leafmap", + "rel": "/software/repository/github/giswqs/leafmap", + "avatar": "https://avatars.githubusercontent.com/u/5016453?v=4", + "description": "A Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment", + "topics": [ + "ipyleaflet", + "folium", + "mapping", + "python", + "geopython", + "jupyter-notebook", + "jupyter", + "gis", + "dataviz", + "data-science", + "whiteboxtools", + "geospatial", + "geospatial-analysis" + ] + }, + { + "uid": "github/giswqs/lidar", + "url": "https://github.com/giswqs/lidar", + "rel": "/software/repository/github/giswqs/lidar", + "avatar": "https://avatars.githubusercontent.com/u/5016453?v=4", + "description": "A Python package for delineating nested surface depressions from digital elevation data.", + "topics": [ + "python", + "lidar", + "digital-elevation-model", + "gis", + "remote-sensing", + "image-processing", + "terrain-analysis", + "hydrological" + ] + }, + { + "uid": "github/miche-levi/pncbc-eftofpng", + "url": "https://github.com/miche-levi/pncbc-eftofpng", + "rel": "/software/repository/github/miche-levi/pncbc-eftofpng", + "avatar": "https://avatars.githubusercontent.com/u/28704109?v=4", + "description": null, "topics": [] }, { - "uid": "github/ltlancas/walter", - "url": "https://github.com/ltlancas/walter", - "rel": "/software/repository/github/ltlancas/walter", - "avatar": "https://avatars.githubusercontent.com/u/15038244?v=4", - "description": "A code to make predictions for the number of resolved stars in a given observation with the future Nancy Grace Roman Space Telescope (RST)", - "topics": [] + "uid": "github/pymc-devs/pymc3", + "url": "https://github.com/pymc-devs/pymc3", + "rel": "/software/repository/github/pymc-devs/pymc3", + "avatar": "https://avatars3.githubusercontent.com/u/81121?v=4", + "description": "Probabilistic Programming in Python: Bayesian Modeling and Probabilistic Machine Learning with Theano", + "topics": [ + "python", + "statistical-analysis", + "bayesian-inference", + "mcmc", + "variational-inference", + "theano", + "probabilistic-programming" + ] }, { - "uid": "github/obreschkow/dftools", - "url": "https://github.com/obreschkow/dftools", - "rel": "/software/repository/github/obreschkow/dftools", - "avatar": "https://avatars.githubusercontent.com/u/28353939?v=4", + "uid": "github/rajmadan96/StochasticDominance.jl", + "url": "https://github.com/rajmadan96/StochasticDominance.jl", + "rel": "/software/repository/github/rajmadan96/StochasticDominance.jl", + "avatar": "https://avatars.githubusercontent.com/u/62553056?v=4", "description": null, "topics": [] }, { - "uid": "github/manulera/OpenCloning_frontend", - "url": "https://github.com/manulera/OpenCloning_frontend", - "rel": "/software/repository/github/manulera/OpenCloning_frontend", - "avatar": "https://avatars.githubusercontent.com/u/22526102?v=4", - "description": "The frontend application for OpenCloning", - "topics": [] - }, - { - "uid": "github/LindaNab/mecor", - "url": "https://github.com/LindaNab/mecor", - "rel": "/software/repository/github/LindaNab/mecor", - "avatar": "https://avatars.githubusercontent.com/u/34091575?v=4", - "description": "measurement error correction", + "uid": "github/AtrCheema/SeqMetrics", + "url": "https://github.com/AtrCheema/SeqMetrics", + "rel": "/software/repository/github/AtrCheema/SeqMetrics", + "avatar": "https://avatars.githubusercontent.com/u/25817388?v=4", + "description": "Various errors for tabular/structured/time-series data", "topics": [ - "measurement-error", - "statistics", - "linear-models" + "performance-metrics", + "errors", + "score", + "loss" ] }, { - "uid": "github/tupui/scipy", - "url": "https://github.com/tupui/scipy", - "rel": "/software/repository/github/tupui/scipy", - "avatar": "https://avatars.githubusercontent.com/u/23188539?v=4", - "description": "Scipy library main repository", + "uid": "github/DochtermannLab/BehavioralHeritability", + "url": "https://github.com/DochtermannLab/BehavioralHeritability", + "rel": "/software/repository/github/DochtermannLab/BehavioralHeritability", + "avatar": "https://avatars.githubusercontent.com/u/47366531?v=4", + "description": null, "topics": [] }, { - "uid": "github/JuliaOpt/JuMP.jl", - "url": "https://github.com/jump-dev/JuMP.jl", - "rel": "/software/repository/github/JuliaOpt/JuMP.jl", - "avatar": "https://avatars3.githubusercontent.com/u/48496332?v=4", - "description": "Modeling language for Mathematical Optimization (linear, mixed-integer, conic, semidefinite, nonlinear)", - "topics": [ - "optimization", - "julia", - "modeling-language" - ] + "uid": "github/DochtermannLab/G-PopComparison", + "url": "https://github.com/DochtermannLab/G-PopComparison", + "rel": "/software/repository/github/DochtermannLab/G-PopComparison", + "avatar": "https://avatars.githubusercontent.com/u/47366531?v=4", + "description": null, + "topics": [] }, { - "uid": "github/haiyang1986/TVAR", - "url": "https://github.com/haiyang1986/TVAR", - "rel": "/software/repository/github/haiyang1986/TVAR", - "avatar": "https://avatars.githubusercontent.com/u/52192058?v=4", - "description": "a deep learning approach for assessing tissue-specific functional effects of non-coding variants", + "uid": "github/Parsoa/SVDSS", + "url": "https://github.com/Parsoa/SVDSS", + "rel": "/software/repository/github/Parsoa/SVDSS", + "avatar": "https://avatars.githubusercontent.com/u/10050811?v=4", + "description": "Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)", "topics": [] }, { - "uid": "github/kd0kfo/cosmology", - "url": "https://github.com/kd0kfo/cosmology", - "rel": "/software/repository/github/kd0kfo/cosmology", - "avatar": "https://avatars.githubusercontent.com/u/2445911?v=4", - "description": "Applications to simulate gravitational lensing, through ray tracing and shear calculation. See http://research.davecoss.com for more details.", + "uid": "github/potassco/clingo", + "url": "https://github.com/potassco/clingo", + "rel": "/software/repository/github/potassco/clingo", + "avatar": "https://avatars.githubusercontent.com/u/19286215?v=4", + "description": "\ud83e\udd14 A grounder and solver for logic programs.", "topics": [] }, { - "uid": "github/teoxxx/nemiss_pbl", - "url": "https://github.com/teoxxx/nemiss_pbl", - "rel": "/software/repository/github/teoxxx/nemiss_pbl", - "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", - "description": "nemiss neutrino emission from hydrocode data describing a simulated stellar binary system", - "topics": [] + "uid": "github/Jwindler/PlotHiC", + "url": "https://github.com/Jwindler/PlotHiC", + "rel": "/software/repository/github/Jwindler/PlotHiC", + "avatar": "https://avatars.githubusercontent.com/u/41459206?v=4", + "description": "The tool is employed for the visualisation of genome-wide contact heatmaps.", + "topics": [ + "autohic" + ] }, { - "uid": "github/teoxxx/nemiss_proper", - "url": "https://github.com/teoxxx/nemiss_proper", - "rel": "/software/repository/github/teoxxx/nemiss_proper", - "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", - "description": "nemiss code repo 2023", + "uid": "github/poissonconsulting/bisonpicsuite", + "url": "https://github.com/poissonconsulting/bisonpicsuite", + "rel": "/software/repository/github/poissonconsulting/bisonpicsuite", + "avatar": "https://avatars.githubusercontent.com/u/1679318?v=4", + "description": "Loads the three bisonpic packages (bisonpictools, shinybisonpic, and runbisonpic)", "topics": [] }, { - "uid": "github/teoxxx/rlos", - "url": "https://github.com/teoxxx/rlos", - "rel": "/software/repository/github/teoxxx/rlos", - "avatar": "https://avatars.githubusercontent.com/u/40962945?v=4", - "description": "RLOS Relativistic Line of Sight, time-resolved imaging of model astrophysical jets", + "uid": "github/poissonconsulting/bbousuite", + "url": "https://github.com/poissonconsulting/bbousuite", + "rel": "/software/repository/github/poissonconsulting/bbousuite", + "avatar": "https://avatars.githubusercontent.com/u/1679318?v=4", + "description": "Easily install and load bbou (boreal caribou) R packages", "topics": [] }, { - "uid": "github/YongyiLuo98/BVSim", - "url": "https://github.com/YongyiLuo98/BVSim", - "rel": "/software/repository/github/YongyiLuo98/BVSim", - "avatar": "https://avatars.githubusercontent.com/u/128009982?v=4", - "description": "BVSim: A Benchmarking Variation Simulator Mimicking Human Variation Spectrum", + "uid": "github/hongli-ma/RNANetMotif", + "url": "https://github.com/hongli-ma/RNANetMotif", + "rel": "/software/repository/github/hongli-ma/RNANetMotif", + "avatar": "https://avatars.githubusercontent.com/u/42988626?v=4", + "description": "RNA structural motif finder", "topics": [] }, { - "uid": "github/Multiversario/satcand", - "url": "https://github.com/Multiversario/satcand", - "rel": "/software/repository/github/Multiversario/satcand", - "avatar": "https://avatars.githubusercontent.com/u/50124332?v=4", - "description": "Tools to apply theoretical constraints of orbital stability and tidal migration to KOI exomoon candidates. ", + "uid": "github/bioinfo-ut/GenomeTester4", + "url": "https://github.com/bioinfo-ut/GenomeTester4", + "rel": "/software/repository/github/bioinfo-ut/GenomeTester4", + "avatar": "https://avatars.githubusercontent.com/u/12512365?v=4", + "description": "A toolkit for performing set operations - union, intersection and complement - on k-mer lists.", "topics": [] }, { - "uid": "github/humanfactors/FIPS", - "url": "https://github.com/humanfactors/FIPS", - "rel": "/software/repository/github/humanfactors/FIPS", - "avatar": "https://avatars2.githubusercontent.com/u/16096044?v=4", - "description": "The Fatigue Impairment Prediction Suite (for R)", - "topics": [ - "r", - "rstats", - "fatigue", - "human-factors", - "biomathematics" - ] + "uid": "github/bioinfo-ut/PlasmidSeeker", + "url": "https://github.com/bioinfo-ut/PlasmidSeeker", + "rel": "/software/repository/github/bioinfo-ut/PlasmidSeeker", + "avatar": "https://avatars.githubusercontent.com/u/12512365?v=4", + "description": "A k-mer based program for the identification of known plasmids from whole-genome sequencing reads", + "topics": [] }, { - "uid": "github/phitterio/phitter-kernel", - "url": "https://github.com/phitter-core/phitter-kernel", - "rel": "/software/repository/github/phitterio/phitter-kernel", - "avatar": "https://avatars.githubusercontent.com/u/106888809?v=4", - "description": "Phitter is a python library for accurately fitting statistical distributions to datasets, offering intuitive usage, comprehensive visualization, and support for multiple distributions to enhance data analysis projects.", + "uid": "github/geospace-code/h5fortran", + "url": "https://github.com/geospace-code/h5fortran", + "rel": "/software/repository/github/geospace-code/h5fortran", + "avatar": "https://avatars.githubusercontent.com/u/61321120?v=4", + "description": "Lightweight HDF5 polymorphic Fortran: h5write() h5read()", "topics": [ - "operations-research", - "probability-distribution", - "probability-models", - "simulation" + "fortran2018", + "hdf5", + "hdf5-wrapper", + "modern-fortran", + "object-oriented-fortran" ] }, { - "uid": "github/sebhaan/geobo", - "url": "https://github.com/sebhaan/geobo", - "rel": "/software/repository/github/sebhaan/geobo", - "avatar": "https://avatars.githubusercontent.com/u/13387042?v=4", - "description": "Python package for Multi-Objective Bayesian Optimisation and Joint Inversion", - "topics": [] - }, - { - "uid": "github/widdowquinn/pyani", - "url": "https://github.com/widdowquinn/pyani", - "rel": "/software/repository/github/widdowquinn/pyani", - "avatar": "https://avatars.githubusercontent.com/u/63981?v=4", - "description": "Application and Python module for average nucleotide identity analyses of microbes.", + "uid": "github/quadram-institute-bioscience/dadaist2", + "url": "https://github.com/quadram-institute-bioscience/dadaist2", + "rel": "/software/repository/github/quadram-institute-bioscience/dadaist2", + "avatar": "https://avatars.githubusercontent.com/u/37581082?v=4", + "description": "\ud83c\udfa8 dadaist2 - Highway to R", "topics": [ + "dada2", + "asv", "bioinformatics", - "average-nucleotide-identity", + "16s", + "amplicon-pipeline", "taxonomy", - "taxonomy-assignment", - "classification", - "ani" + "phyloseq", + "metabarcoding" ] }, { - "uid": "github/facebookresearch/segment-anything", - "url": "https://github.com/facebookresearch/segment-anything", - "rel": "/software/repository/github/facebookresearch/segment-anything", - "avatar": "https://avatars.githubusercontent.com/u/16943930?v=4", - "description": "The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.", + "uid": "github/EmmanuelSchaan/LaSSI", + "url": "https://github.com/EmmanuelSchaan/LaSSI", + "rel": "/software/repository/github/EmmanuelSchaan/LaSSI", + "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", + "description": "Lightweight Fisher forecast for LSS.", "topics": [] }, { - "uid": "github/facebookresearch/faiss", - "url": "https://github.com/facebookresearch/faiss", - "rel": "/software/repository/github/facebookresearch/faiss", - "avatar": "https://avatars.githubusercontent.com/u/16943930?v=4", - "description": "A library for efficient similarity search and clustering of dense vectors.", + "uid": "github/EmmanuelSchaan/ThumbStack", + "url": "https://github.com/EmmanuelSchaan/ThumbStack", + "rel": "/software/repository/github/EmmanuelSchaan/ThumbStack", + "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", + "description": null, "topics": [] }, { - "uid": "github/alessiospuriomancini/cosmopower", - "url": "https://github.com/alessiospuriomancini/cosmopower", - "rel": "/software/repository/github/alessiospuriomancini/cosmopower", - "avatar": "https://avatars.githubusercontent.com/u/16155457?v=4", - "description": "Machine Learning - accelerated Bayesian inference", - "topics": [ - "machine-learning", - "deep-learning", - "tensorflow", - "cosmology", - "bayesian-inference" - ] + "uid": "github/EmmanuelSchaan/HaloGen", + "url": "https://github.com/EmmanuelSchaan/HaloGen", + "rel": "/software/repository/github/EmmanuelSchaan/HaloGen", + "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", + "description": "Modular halo model code for matter, galaxies, lensing, tSZ and CIB.", + "topics": [] }, { - "uid": "github/lucabaldini/ixpeobssim", - "url": "https://github.com/lucabaldini/ixpeobssim", - "rel": "/software/repository/github/lucabaldini/ixpeobssim", - "avatar": "https://avatars.githubusercontent.com/u/8972541?v=4", - "description": "Simulation and analysis framework for the Imaging X-ray Polarimetry Explorer", - "topics": [ - "astronomy", - "polarimetry", - "python", - "x-ray", - "ixpe" - ] + "uid": "github/EmmanuelSchaan/LensQuEst", + "url": "https://github.com/EmmanuelSchaan/LensQuEst", + "rel": "/software/repository/github/EmmanuelSchaan/LensQuEst", + "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", + "description": "CMB lensing: standard quadratic estimator, shear and magnification (https://arxiv.org/abs/1804.06403).", + "topics": [] }, { - "uid": "github/pierrexyz/cbird", - "url": "https://github.com/pierrexyz/cbird", - "rel": "/software/repository/github/pierrexyz/cbird", - "avatar": "https://avatars.githubusercontent.com/u/27974627?v=4", - "description": "Code for Bias tracers In Redshift space", + "uid": "github/eleniadam/npgreat", + "url": "https://github.com/eleniadam/npgreat", + "rel": "/software/repository/github/eleniadam/npgreat", + "avatar": "https://avatars.githubusercontent.com/u/31490261?v=4", + "description": "A hybrid assembly method that utilizes Nanopore and Linked-Reads datasets for the assembly of the human subtelomere regions.", "topics": [] }, { - "uid": "github/pierrexyz/pybird", - "url": "https://github.com/pierrexyz/pybird", - "rel": "/software/repository/github/pierrexyz/pybird", - "avatar": "https://avatars.githubusercontent.com/u/27974627?v=4", - "description": "Python code for Biased tracers in redshift space", + "uid": "github/wmalab/EnHiC", + "url": "https://github.com/wmalab/EnHiC", + "rel": "/software/repository/github/wmalab/EnHiC", + "avatar": "https://avatars.githubusercontent.com/u/59233777?v=4", + "description": "Enhancing Hi-C matrix resolution", "topics": [] }, { - "uid": "github/fitbenchmarking/fitbenchmarking", - "url": "https://github.com/fitbenchmarking/fitbenchmarking", - "rel": "/software/repository/github/fitbenchmarking/fitbenchmarking", - "avatar": "https://avatars.githubusercontent.com/u/49585251?v=4", - "description": "Tool for comparing the run time and accuracy of minimizers on fit benchmarking problems", + "uid": "github/sid-krish/Rhometa_Full_Genome", + "url": "https://github.com/sid-krish/Rhometa_Full_Genome", + "rel": "/software/repository/github/sid-krish/Rhometa_Full_Genome", + "avatar": "https://avatars.githubusercontent.com/u/56985355?v=4", + "description": null, "topics": [] }, { - "uid": "github/fabian-sp/GGLasso", - "url": "https://github.com/fabian-sp/GGLasso", - "rel": "/software/repository/github/fabian-sp/GGLasso", - "avatar": "https://avatars.githubusercontent.com/u/51907567?v=4", - "description": "Implementations for solving the Group and Fused Graphical Lasso problem", - "topics": [ - "graphical-models", - "optimization", - "latent-variable-models", - "network-inference", - "graphical-lasso" - ] + "uid": "github/richteague/eddy", + "url": "https://github.com/richteague/eddy", + "rel": "/software/repository/github/richteague/eddy", + "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", + "description": "Python tools to recover precise rotation profiles of disks.", + "topics": [] }, { - "uid": "github/jmhuie/Slicer-SegmentGeometry", - "url": "https://github.com/jmhuie/Slicer-SegmentGeometry", - "rel": "/software/repository/github/jmhuie/Slicer-SegmentGeometry", - "avatar": "https://avatars.githubusercontent.com/u/52302862?v=4", - "description": "Extension to calculate second moment of area and other cross-sectional properties in 3D Slicer", - "topics": [ - "3d-slicer-extension" - ] + "uid": "github/richteague/disksurf", + "url": "https://github.com/richteague/disksurf", + "rel": "/software/repository/github/richteague/disksurf", + "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", + "description": "Measure the molecular emission surface of protoplanetary disks. Based on Pinte et al. (2018).", + "topics": [] }, { - "uid": "github/itsoulos/GlobalOptimus", - "url": "https://github.com/itsoulos/GlobalOptimus", - "rel": "/software/repository/github/itsoulos/GlobalOptimus", - "avatar": "https://avatars.githubusercontent.com/u/6303921?v=4", - "description": null, + "uid": "github/richteague/gofish", + "url": "https://github.com/richteague/gofish", + "rel": "/software/repository/github/richteague/gofish", + "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", + "description": "\ud83c\udfa3 Fish for line detections by exploiting the known velocity structure of the disk.", "topics": [] }, { - "uid": "github/oloBion/Retip", - "url": "https://github.com/oloBion/Retip", - "rel": "/software/repository/github/oloBion/Retip", - "avatar": "https://avatars.githubusercontent.com/u/71494435?v=4", - "description": "Retip - Retention Time prediction for metabolomics", + "uid": "github/richteague/bettermoments", + "url": "https://github.com/richteague/bettermoments", + "rel": "/software/repository/github/richteague/bettermoments", + "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", + "description": "A robust way to calculate line-of-sight velocities.", + "topics": [] + }, + { + "uid": "github/connectomicslab/connectomemapper3", + "url": "https://github.com/connectomicslab/connectomemapper3", + "rel": "/software/repository/github/connectomicslab/connectomemapper3", + "avatar": "https://avatars.githubusercontent.com/u/49934994?v=4", + "description": "Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD data, and preprocessed EEG to multi-resolution brain parcellation with corresponding connection matrices.", "topics": [ - "metabolomics", - "retention-time", - "lcms" + "bids", + "bidsapp", + "dmri", + "fmri", + "connectome", + "bids-apps", + "pipelines", + "chuv", + "brain", + "parcellation", + "python", + "eeg" ] }, { - "uid": "github/rvaser/thread_pool", - "url": "https://github.com/rvaser/thread_pool", - "rel": "/software/repository/github/rvaser/thread_pool", - "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", - "description": "C++ thread pool library", + "uid": "github/mattwarkentin/openmpp", + "url": "https://github.com/mattwarkentin/openmpp", + "rel": "/software/repository/github/mattwarkentin/openmpp", + "avatar": "https://avatars.githubusercontent.com/u/27825069?v=4", + "description": "Programmatic interface to the OpenM++ microsimulation platform", "topics": [] }, { - "uid": "github/rvaser/spoa", - "url": "https://github.com/rvaser/spoa", - "rel": "/software/repository/github/rvaser/spoa", - "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", - "description": "SIMD partial order alignment tool/library", + "uid": "github/matplotlib/matplotlib", + "url": "https://github.com/matplotlib/matplotlib", + "rel": "/software/repository/github/matplotlib/matplotlib", + "avatar": "https://avatars0.githubusercontent.com/u/215947?v=4", + "description": "matplotlib: plotting with Python", "topics": [] }, { - "uid": "github/rvaser/bioparser", - "url": "https://github.com/rvaser/bioparser", - "rel": "/software/repository/github/rvaser/bioparser", - "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", - "description": "C++ library for parsing several formats in bioinformatics", + "uid": "github/ben-cassese/squishyplanet", + "url": "https://github.com/ben-cassese/squishyplanet", + "rel": "/software/repository/github/ben-cassese/squishyplanet", + "avatar": "https://avatars.githubusercontent.com/u/10929214?v=4", + "description": "Transits of non-spherical exoplanets", "topics": [] }, { - "uid": "github/rvaser/sword", - "url": "https://github.com/rvaser/sword", - "rel": "/software/repository/github/rvaser/sword", - "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", - "description": "SWORD - a highly efficient protein database search", + "uid": "github/FelixKrueger/TrimGalore", + "url": "https://github.com/FelixKrueger/TrimGalore", + "rel": "/software/repository/github/FelixKrueger/TrimGalore", + "avatar": "https://avatars.githubusercontent.com/u/5870509?v=4", + "description": "A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data", "topics": [] }, { - "uid": "github/rvaser/rampler", - "url": "https://github.com/rvaser/rampler", - "rel": "/software/repository/github/rvaser/rampler", - "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", - "description": "module for sampling genomic sequences", - "topics": [] + "uid": "github/mad-lab-fau/tpcp", + "url": "https://github.com/mad-lab-fau/tpcp", + "rel": "/software/repository/github/mad-lab-fau/tpcp", + "avatar": "https://avatars.githubusercontent.com/u/48119197?v=4", + "description": "Pipeline and Dataset helpers for complex algorithm evaluation.", + "topics": [ + "machine-learning", + "python" + ] }, { - "uid": "github/JulianZDing/UniMAP", - "url": "https://github.com/JulianZDing/UniMAP", - "rel": "/software/repository/github/JulianZDing/UniMAP", - "avatar": "https://avatars.githubusercontent.com/u/50474891?v=4", - "description": null, + "uid": "github/mad-lab-fau/imucal", + "url": "https://github.com/mad-lab-fau/imucal", + "rel": "/software/repository/github/mad-lab-fau/imucal", + "avatar": "https://avatars.githubusercontent.com/u/48119197?v=4", + "description": "A Python library to calibrate 6 DOF IMUs", "topics": [] }, { - "uid": "github/vmalnathnambiar/exfilms", - "url": "https://github.com/vmalnathnambiar/exfilms", - "rel": "/software/repository/github/vmalnathnambiar/exfilms", - "avatar": "https://avatars.githubusercontent.com/u/104112048?v=4", - "description": "A cross-platform, command line interface tool to extract mass spectrometry data from mzML formatted files, with filtering capabilities.", + "uid": "github/sumn2u/annotate-lab", + "url": "https://github.com/sumn2u/annotate-lab", + "rel": "/software/repository/github/sumn2u/annotate-lab", + "avatar": "https://avatars.githubusercontent.com/u/6531541?v=4", + "description": "Annotate-lab is an open-source image annotation tool for efficient dataset creation. With an intuitive interface and flexible export options, it streamlines your machine learning workflow. \ud83d\uddbc\ufe0f\u270f\ufe0f\ud83d\udcd1", "topics": [ - "data-extraction", - "mass-spectrometry", - "spectrum-filtering", - "command-line-tool", - "data-standardisation", - "open-source" + "annotation-tool", + "image-annotation", + "image-labeling", + "image-segmentation", + "collaborate", + "computer-vision", + "machine-learning", + "classification", + "image-masking", + "segmentation", + "python", + "react" ] }, { - "uid": "github/ttgump/scDHMap", - "url": "https://github.com/ttgump/scDHMap", - "rel": "/software/repository/github/ttgump/scDHMap", - "avatar": "https://avatars.githubusercontent.com/u/1187979?v=4", - "description": "Model-based deep hyperbolic manifold learning for visualizing complex hierarchical structures in single-cell genomics data", + "uid": "github/masadcv/FastGeodis", + "url": "https://github.com/masadcv/FastGeodis", + "rel": "/software/repository/github/masadcv/FastGeodis", + "avatar": "https://avatars.githubusercontent.com/u/3410225?v=4", + "description": "Fast Implementation of Generalised Geodesic Distance Transform for CPU (OpenMP) and GPU (CUDA)", "topics": [ "deep-learning", - "hyperbolic-embeddings", - "single-cell", - "dimensionality-reduction", - "manifold-learning", - "visualization" + "gpu", + "pytorch" + ] + }, + { + "uid": "github/kevin-tofu/scikit-topt", + "url": "https://github.com/kevin-tofu/scikit-topt", + "rel": "/software/repository/github/kevin-tofu/scikit-topt", + "avatar": "https://avatars.githubusercontent.com/u/85769623?v=4", + "description": "Scikit Topology Optimization with Scipy Family", + "topics": [ + "topology-optimization", + "scikit-fem", + "fem", + "scikit", + "mesh", + "mesh-based", + "finite-element-analysis", + "unstructured", + "unstructured-meshes" ] }, { - "uid": "github/ttgump/scDeepCluster_pytorch", - "url": "https://github.com/ttgump/scDeepCluster_pytorch", - "rel": "/software/repository/github/ttgump/scDeepCluster_pytorch", - "avatar": "https://avatars.githubusercontent.com/u/1187979?v=4", - "description": "Pytorch implementation of scDeepCluster for Single Cell RNA-seq data", + "uid": "github/exoclime/Helios-r2", + "url": "https://github.com/exoclime/Helios-r2", + "rel": "/software/repository/github/exoclime/Helios-r2", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "A Bayesian Nested-Sampling Retrieval Code", "topics": [ - "deep-learning", - "unsupervised-learning", - "single-cell-rna-seq", - "clustering", - "single-cell" + "cuda", + "exoplanets", + "retrieval" ] }, { - "uid": "github/sfarrens/sf_deconvolve", - "url": "https://github.com/sfarrens/sf_deconvolve", - "rel": "/software/repository/github/sfarrens/sf_deconvolve", - "avatar": "https://avatars.githubusercontent.com/u/6851839?v=4", - "description": "A Python code designed for PSF deconvolution using a low-rank approximation and sparsity. The code can handle a fixed PSF for the entire field or a stack of PSFs for each galaxy position.", + "uid": "github/exoclime/THOR", + "url": "https://github.com/exoclime/THOR", + "rel": "/software/repository/github/exoclime/THOR", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "Atmospheric fluid dynamics solver optimized for GPUs.", "topics": [] }, { - "uid": "github/sfarrens/sfof", - "url": "https://github.com/sfarrens/sfof", - "rel": "/software/repository/github/sfarrens/sfof", - "avatar": "https://avatars.githubusercontent.com/u/6851839?v=4", - "description": "SFoF is a friends-of-friends galaxy cluster detection algorithm that operates in either spectroscopic or photometric redshift space. The linking parameters, both transverse and along the line-of-sight, change as a function of redshift to account for selection effects. The code is written in C++ and implements OMP to loop through the photometric redshift bins.", - "topics": [ - "redshift", - "percolation", - "galaxy", - "clusters", - "cosmology" - ] + "uid": "github/exoclime/HELA", + "url": "https://github.com/exoclime/HELA", + "rel": "/software/repository/github/exoclime/HELA", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "Random Forest retrieval for exoplanet atmospheres", + "topics": [] }, { - "uid": "github/CavendishAstrophysics/anmap", - "url": "https://github.com/CavendishAstrophysics/anmap", - "rel": "/software/repository/github/CavendishAstrophysics/anmap", - "avatar": "https://avatars.githubusercontent.com/u/7826375?v=4", - "description": "MRAO image and data analysis system", + "uid": "github/exoclime/HELIOS-K", + "url": "https://github.com/exoclime/HELIOS-K", + "rel": "/software/repository/github/exoclime/HELIOS-K", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "Ultrafast opacity calculator for exoplanetary atmospheres.", "topics": [] }, { - "uid": "github/CavendishAstrophysics/postmortem", - "url": "https://github.com/CavendishAstrophysics/postmortem", - "rel": "/software/repository/github/CavendishAstrophysics/postmortem", - "avatar": "https://avatars.githubusercontent.com/u/7826375?v=4", - "description": " Visibility data reduction and map making package from MRAO", + "uid": "github/exoclime/VULCAN", + "url": "https://github.com/exoclime/VULCAN", + "rel": "/software/repository/github/exoclime/VULCAN", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "Chemical Kinetics For Exoplanetary Atmospheres", "topics": [] }, { - "uid": "github/bokulich-lab/q2-fondue", - "url": "https://github.com/bokulich-lab/q2-fondue", - "rel": "/software/repository/github/bokulich-lab/q2-fondue", - "avatar": "https://avatars.githubusercontent.com/u/66746566?v=4", - "description": "Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere", + "uid": "github/exoclime/FastChem", + "url": "https://github.com/exoclime/FastChem", + "rel": "/software/repository/github/exoclime/FastChem", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "An ultra-fast equilibrium chemistry", "topics": [] }, { - "uid": "github/Effective-Quadratures/Effective-Quadratures", - "url": "https://github.com/Effective-Quadratures/Effective-Quadratures", - "rel": "/software/repository/github/Effective-Quadratures/Effective-Quadratures", - "avatar": "https://avatars3.githubusercontent.com/u/20475765?v=4", - "description": null, + "uid": "github/exoclime/HELIOS", + "url": "https://github.com/exoclime/HELIOS", + "rel": "/software/repository/github/exoclime/HELIOS", + "avatar": "https://avatars.githubusercontent.com/u/61202311?v=4", + "description": "GPU-Accelerated Radiative Transfer Code For Exoplanetary Atmospheres", + "topics": [] + }, + { + "uid": "github/cosmo-ethz/CosmoHammer", + "url": "https://github.com/cosmo-ethz/CosmoHammer", + "rel": "/software/repository/github/cosmo-ethz/CosmoHammer", + "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", + "description": "Cosmological parameter estimation with the MCMC Hammer, please use https://cosmo-gitlab.phys.ethz.ch/cosmo/CosmoHammer, this repository is outdated ! Docs at http://cosmo-docs.phys.ethz.ch/cosmoHammer/", "topics": [ - "polynomials", - "quadratures", - "least-squares", - "interpolation", - "approximation", - "effective-quadratures", - "python", - "matrix-factorization" + "cosmology", + "outdated", + "eth-zurich", + "markov-chains" ] }, { - "uid": "github/JMLascar/SUSHI", - "url": "https://github.com/JMLascar/SUSHI", - "rel": "/software/repository/github/JMLascar/SUSHI", - "avatar": "https://avatars.githubusercontent.com/u/54967118?v=4", - "description": null, + "uid": "github/cosmo-ethz/seek", + "url": "https://github.com/cosmo-ethz/seek", + "rel": "/software/repository/github/cosmo-ethz/seek", + "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", + "description": "A flexible and easy-to-extend data processing pipeline for single dish radio telescopes", "topics": [] }, { - "uid": "github/mithun218/GiNaCDE", - "url": "https://github.com/mithun218/GiNaCDE", - "rel": "/software/repository/github/mithun218/GiNaCDE", - "avatar": "https://avatars.githubusercontent.com/u/9692622?v=4", - "description": "GiNaC Differential Equation Solver", + "uid": "github/cosmo-ethz/hide", + "url": "https://github.com/cosmo-ethz/hide", + "rel": "/software/repository/github/cosmo-ethz/hide", + "avatar": "https://avatars.githubusercontent.com/u/8969967?v=4", + "description": "A package for simulating of a single dish radio telescope survey", "topics": [] }, { - "uid": "github/FZJ-PGI-12/QAOA.jl", - "url": "https://github.com/FZJ-PGI-12/QAOA.jl", - "rel": "/software/repository/github/FZJ-PGI-12/QAOA.jl", - "avatar": "https://avatars.githubusercontent.com/u/123086565?v=4", + "uid": "github/tanhevg/GpABC.jl", + "url": "https://github.com/tanhevg/GpABC.jl", + "rel": "/software/repository/github/tanhevg/GpABC.jl", + "avatar": "https://avatars.githubusercontent.com/u/5775458?v=4", "description": null, "topics": [] }, { - "uid": "github/jonathanHuwP/CrystalGrowthTracker", - "url": "https://github.com/jonathanHuwP/CrystalGrowthTracker", - "rel": "/software/repository/github/jonathanHuwP/CrystalGrowthTracker", - "avatar": "https://avatars.githubusercontent.com/u/63852810?v=4", - "description": "Extract face growth rate data from x-ray video of growing crystals.", + "uid": "github/zgazak/TAP", + "url": "https://github.com/zgazak/TAP", + "rel": "/software/repository/github/zgazak/TAP", + "avatar": "https://avatars.githubusercontent.com/u/6148069?v=4", + "description": "Transit Analysis Package for IDL", "topics": [] }, { - "uid": "github/dmnfarrell/snpgenie", - "url": "https://github.com/dmnfarrell/snpgenie", - "rel": "/software/repository/github/dmnfarrell/snpgenie", - "avatar": "https://avatars0.githubusercontent.com/u/7859189?v=4", - "description": "command line and desktop tool for microbial variant calling", - "topics": [ - "bioinformatics", - "genomics", - "ngs-pipeline", - "python", - "pyside2" - ] - }, - { - "uid": "github/dmnfarrell/epitopepredict", - "url": "https://github.com/dmnfarrell/epitopepredict", - "rel": "/software/repository/github/dmnfarrell/epitopepredict", - "avatar": "https://avatars0.githubusercontent.com/u/7859189?v=4", - "description": "Python package and command line tool for epitope prediction", - "topics": [ - "epitope-prediction-methods", - "immunology", - "bioinformatics" - ] - }, - { - "uid": "github/ShubhadeepSadhukhan1993/fastSF", - "url": "https://github.com/ShubhadeepSadhukhan1993/fastSF", - "rel": "/software/repository/github/ShubhadeepSadhukhan1993/fastSF", - "avatar": "https://avatars0.githubusercontent.com/u/60309103?v=4", - "description": "A hybrid parallel C++ code to compute structure function of different order", + "uid": "github/theonefromnowhere/FitCov", + "url": "https://github.com/theonefromnowhere/FitCov", + "rel": "/software/repository/github/theonefromnowhere/FitCov", + "avatar": "https://avatars.githubusercontent.com/u/74179509?v=4", + "description": "The code for the Fitted Covariance generation based on %paper link%", "topics": [] }, { - "uid": "github/xuequan818/MatrixFuns.jl", - "url": "https://github.com/xuequan818/MatrixFuns.jl", - "rel": "/software/repository/github/xuequan818/MatrixFuns.jl", - "avatar": "https://avatars.githubusercontent.com/u/56442655?v=4", - "description": "Matrix functions in Julia", + "uid": "github/seheonoh/baygaud", + "url": "https://github.com/seheonoh/baygaud", + "rel": "/software/repository/github/seheonoh/baygaud", + "avatar": "https://avatars.githubusercontent.com/u/24447326?v=4", + "description": null, "topics": [] }, { - "uid": "github/ulebreui/shark", - "url": "https://github.com/ulebreui/shark", - "rel": "/software/repository/github/ulebreui/shark", - "avatar": "https://avatars.githubusercontent.com/u/74534531?v=4", - "description": "This is the public repository of the shark code (Lebreuilly et al., 2023)", + "uid": "github/seheonoh/2dbat", + "url": "https://github.com/seheonoh/2dbat", + "rel": "/software/repository/github/seheonoh/2dbat", + "avatar": "https://avatars.githubusercontent.com/u/24447326?v=4", + "description": "2dbat v1.0", "topics": [] }, { - "uid": "github/yaml2sbml-dev/yaml2sbml", - "url": "https://github.com/yaml2sbml-dev/yaml2sbml", - "rel": "/software/repository/github/yaml2sbml-dev/yaml2sbml", - "avatar": "https://avatars.githubusercontent.com/u/69810793?v=4", - "description": "Little tool to convert an ODE model specified in the YAML format to SBML.", + "uid": "github/FEniCS/basix", + "url": "https://github.com/FEniCS/basix", + "rel": "/software/repository/github/FEniCS/basix", + "avatar": "https://avatars.githubusercontent.com/u/3868708?v=4", + "description": "FEniCS finite element basis evaluation library", "topics": [ - "sbml", - "petab", - "ode", - "ode-model", - "yaml" + "finite-elements", + "high-order", + "fenics-x" ] }, { - "uid": "github/spyder-ide/spyder", - "url": "https://github.com/spyder-ide/spyder", - "rel": "/software/repository/github/spyder-ide/spyder", - "avatar": "https://avatars1.githubusercontent.com/u/1284937?v=4", - "description": "Official repository for Spyder - The Scientific Python Development Environment", + "uid": "github/FEniCS/ffcx", + "url": "https://github.com/FEniCS/ffcx", + "rel": "/software/repository/github/FEniCS/ffcx", + "avatar": "https://avatars2.githubusercontent.com/u/3868708?v=4", + "description": "Next generation FEniCS Form Compiler", "topics": [ - "spyder", - "python", - "pyqt5", - "anaconda", - "anaconda-distribution", - "winpython", - "qt" + "partial-differential-equations", + "finite-element-methods", + "variational-method", + "code-generation", + "fenics" ] }, { - "uid": "github/cancerit/alleleCount", - "url": "https://github.com/cancerit/alleleCount", - "rel": "/software/repository/github/cancerit/alleleCount", - "avatar": "https://avatars.githubusercontent.com/u/7450587?v=4", - "description": "Support code for NGS copy number algorithms. Takes a file of locations and a [cr|b]am file and generates a count of coverage of each allele [ACGT] at that location (given any filter settings)", + "uid": "github/open2c/pairtools", + "url": "https://github.com/open2c/pairtools", + "rel": "/software/repository/github/open2c/pairtools", + "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", + "description": "CLI tools to process mapped Hi-C data", "topics": [] }, { - "uid": "github/hall-lab/speedseq", - "url": "https://github.com/hall-lab/speedseq", - "rel": "/software/repository/github/hall-lab/speedseq", - "avatar": "https://avatars.githubusercontent.com/u/7242168?v=4", - "description": "A flexible framework for rapid genome analysis and interpretation", - "topics": [] + "uid": "github/open2c/polychrom", + "url": "https://github.com/open2c/polychrom", + "rel": "/software/repository/github/open2c/polychrom", + "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", + "description": "Chromosome polymer simulations and in silico capture experiments", + "topics": [ + "loop-extrusion", + "simulation", + "polymer", + "chromatin", + "chromosomes", + "hi-c" + ] }, { - "uid": "github/hall-lab/bamkit", - "url": "https://github.com/hall-lab/bamkit", - "rel": "/software/repository/github/hall-lab/bamkit", - "avatar": "https://avatars.githubusercontent.com/u/7242168?v=4", - "description": "Tools for common BAM file manipulations", + "uid": "github/shergreen/SatGen", + "url": "https://github.com/shergreen/SatGen", + "rel": "/software/repository/github/shergreen/SatGen", + "avatar": "https://avatars.githubusercontent.com/u/842217?v=4", + "description": "A semi-analytical satellite galaxy and dark matter halo generator", "topics": [] }, { - "uid": "github/VasilyKokorev/stardust", - "url": "https://github.com/VasilyKokorev/stardust", - "rel": "/software/repository/github/VasilyKokorev/stardust", - "avatar": "https://avatars.githubusercontent.com/u/45940362?v=4", - "description": "Stardust - SED fitting code for UV-optical and FIR.", - "topics": [] + "uid": "github/chervias/DustFilaments", + "url": "https://github.com/chervias/DustFilaments", + "rel": "/software/repository/github/chervias/DustFilaments", + "avatar": "https://avatars.githubusercontent.com/u/22419110?v=4", + "description": "Paint filaments to produce a thermal dust full sky map at mm frequencies", + "topics": [ + "cosmology", + "planck", + "dust", + "microwave" + ] }, { - "uid": "github/mjuvela/ISM", - "url": "https://github.com/mjuvela/ISM", - "rel": "/software/repository/github/mjuvela/ISM", - "avatar": "https://avatars.githubusercontent.com/u/46849781?v=4", - "description": "Various programs related to interstellar medium (ISM) studies", - "topics": [] + "uid": "github/homerjed/sbgm", + "url": "https://github.com/homerjed/sbgm", + "rel": "/software/repository/github/homerjed/sbgm", + "avatar": "https://avatars.githubusercontent.com/u/47306716?v=4", + "description": "Score-based Diffusion models in JAX.", + "topics": [ + "diffusion", + "diffusion-models", + "equinox", + "jax", + "score-based-generative-modeling", + "score-based-generative-models" + ] }, { - "uid": "github/PlanetHunters/watson", - "url": "https://github.com/PlanetHunters/watson", - "rel": "/software/repository/github/PlanetHunters/watson", - "avatar": "https://avatars.githubusercontent.com/u/78312991?v=4", - "description": "Visual Vetting and Analysis of Transits of Space ObservatioNs", + "uid": "github/homerjed/sbiax", + "url": "https://github.com/homerjed/sbiax", + "rel": "/software/repository/github/homerjed/sbiax", + "avatar": "https://avatars.githubusercontent.com/u/47306716?v=4", + "description": "Fast, lightweight and parallelised simulation-based inference in JAX.", "topics": [ - "exoplanets", - "tess", - "kepler", - "k2", - "pipeline", - "transits" + "generative-models", + "jax", + "normalizing-flows", + "simulation-based-inference" ] }, { - "uid": "github/PlanetHunters/tkmatrix", - "url": "https://github.com/PlanetHunters/tkmatrix", - "rel": "/software/repository/github/PlanetHunters/tkmatrix", - "avatar": "https://avatars.githubusercontent.com/u/78312991?v=4", - "description": "Transits Inject and Recovery Multi-phase Analysis", + "uid": "github/thegenemyers/DALIGNER", + "url": "https://github.com/thegenemyers/DALIGNER", + "rel": "/software/repository/github/thegenemyers/DALIGNER", + "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", + "description": "finds all significant local alignments between reads.", "topics": [] }, { - "uid": "github/shergreen/SatGen", - "url": "https://github.com/shergreen/SatGen", - "rel": "/software/repository/github/shergreen/SatGen", - "avatar": "https://avatars.githubusercontent.com/u/842217?v=4", - "description": "A semi-analytical satellite galaxy and dark matter halo generator", + "uid": "github/thegenemyers/DAMAPPER", + "url": "https://github.com/thegenemyers/DAMAPPER", + "rel": "/software/repository/github/thegenemyers/DAMAPPER", + "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", + "description": "Long read to reference genome mapping tool", "topics": [] }, { - "uid": "github/nu-radio/NuRadioMC", - "url": "https://github.com/nu-radio/NuRadioMC", - "rel": "/software/repository/github/nu-radio/NuRadioMC", - "avatar": "https://avatars.githubusercontent.com/u/40645116?v=4", - "description": "A Monte Carlo simulation package for radio neutrino detectors", - "topics": [ - "simulation", - "neutrino", - "radio" - ] + "uid": "github/thegenemyers/FASTK", + "url": "https://github.com/thegenemyers/FASTK", + "rel": "/software/repository/github/thegenemyers/FASTK", + "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", + "description": "A fast K-mer counter for high-fidelity shotgun datasets", + "topics": [] }, { - "uid": "github/FiorenSt/AutoSourceID-Light", - "url": "https://github.com/FiorenSt/AutoSourceID-Light", - "rel": "/software/repository/github/FiorenSt/AutoSourceID-Light", - "avatar": "https://avatars.githubusercontent.com/u/96529703?v=4", - "description": null, + "uid": "github/thegenemyers/DAZZ_DB", + "url": "https://github.com/thegenemyers/DAZZ_DB", + "rel": "/software/repository/github/thegenemyers/DAZZ_DB", + "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", + "description": "The Dazzler Data Base", "topics": [] }, { - "uid": "github/potree/PotreeConverter", - "url": "https://github.com/potree/PotreeConverter", - "rel": "/software/repository/github/potree/PotreeConverter", - "avatar": "https://avatars2.githubusercontent.com/u/2094934?v=4", - "description": "Create multi res point cloud to use with potree", + "uid": "github/thegenemyers/DEXTRACTOR", + "url": "https://github.com/thegenemyers/DEXTRACTOR", + "rel": "/software/repository/github/thegenemyers/DEXTRACTOR", + "avatar": "https://avatars.githubusercontent.com/u/6890550?v=4", + "description": "bax file decoder and data compressor.", "topics": [] }, { - "uid": "github/mdlreyes/void-dwarf-analysis", - "url": "https://github.com/mdlreyes/void-dwarf-analysis", - "rel": "/software/repository/github/mdlreyes/void-dwarf-analysis", - "avatar": "https://avatars.githubusercontent.com/u/33469801?v=4", - "description": "Reduction and analysis code used to measure kinematics of void dwarf galaxies", + "uid": "github/RussellJurek/busy-function-fitting", + "url": "https://github.com/RussellJurek/busy-function-fitting", + "rel": "/software/repository/github/RussellJurek/busy-function-fitting", + "avatar": "https://avatars.githubusercontent.com/u/7555210?v=4", + "description": "A C/C++ library and Python module that allows users to fit the Busy Function (Westmeier, Jurek, Obreschkow, Koribalski & Staveley-Smith 2013) to data. Previously available at code.google.com/p/busy-function-fitting", "topics": [] }, { - "uid": "github/bioturing/hera", - "url": "https://github.com/bioturing/hera", - "rel": "/software/repository/github/bioturing/hera", - "avatar": "https://avatars.githubusercontent.com/u/30481444?v=4", - "description": "a bioinformatics tool that helps analyze RNA-seq data, providing base-to-base alignment BAM files, transcript abundance estimation, and fusion gene detection.", + "uid": "github/EACcodes/TigerCI", + "url": "https://github.com/EACcodes/TigerCI", + "rel": "/software/repository/github/EACcodes/TigerCI", + "avatar": "https://avatars.githubusercontent.com/u/19611690?v=4", + "description": null, "topics": [] }, { - "uid": "github/sbird/fake_spectra", - "url": "https://github.com/sbird/fake_spectra", - "rel": "/software/repository/github/sbird/fake_spectra", - "avatar": "https://avatars.githubusercontent.com/u/1325948?v=4", - "description": "A code for generating fake spectra from a cosmological simulation", + "uid": "github/hoechenberger/questplus", + "url": "https://github.com/hoechenberger/questplus", + "rel": "/software/repository/github/hoechenberger/questplus", + "avatar": "https://avatars.githubusercontent.com/u/2046265?v=4", + "description": "A QUEST+ implementation in Python.", + "topics": [ + "psychophysics", + "psychology" + ] + }, + { + "uid": "github/refresh-bio/agc", + "url": "https://github.com/refresh-bio/agc", + "rel": "/software/repository/github/refresh-bio/agc", + "avatar": "https://avatars.githubusercontent.com/u/16046310?v=4", + "description": "Assembled Genomes Compressor", "topics": [] }, { - "uid": "github/sbird/GenPK", - "url": "https://github.com/sbird/GenPK", - "rel": "/software/repository/github/sbird/GenPK", - "avatar": "https://avatars.githubusercontent.com/u/1325948?v=4", - "description": "Program for finding the matter power spectrum from Gadget format files. Uses FFTW3 and GadgetReader.", + "uid": "github/refresh-bio/whisper", + "url": "https://github.com/refresh-bio/Whisper", + "rel": "/software/repository/github/refresh-bio/whisper", + "avatar": "https://avatars3.githubusercontent.com/u/16046310?v=4", + "description": null, "topics": [] }, { - "uid": "github/tmux/tmux", - "url": "https://github.com/tmux/tmux", - "rel": "/software/repository/github/tmux/tmux", - "avatar": "https://avatars.githubusercontent.com/u/12054114?v=4", - "description": "tmux source code", + "uid": "github/seqcode/allo", + "url": "https://github.com/seqcode/allo", + "rel": "/software/repository/github/seqcode/allo", + "avatar": "https://avatars.githubusercontent.com/u/18726545?v=4", + "description": "Allo: a multi-mapped read rescue strategy for peak based gene regulatory analyses", "topics": [] }, { - "uid": "github/CHES2023/PyMsOfa", - "url": "https://github.com/CHES2023/PyMsOfa", - "rel": "/software/repository/github/CHES2023/PyMsOfa", - "avatar": "https://avatars.githubusercontent.com/u/144224535?v=4", - "description": "a Python package for the Standards of Fundamental Astronomy (SOFA) service", + "uid": "github/AngusWright/LAMBDAR", + "url": "https://github.com/AngusWright/LAMBDAR", + "rel": "/software/repository/github/AngusWright/LAMBDAR", + "avatar": "https://avatars.githubusercontent.com/u/5625880?v=4", + "description": "LAMBDAR: Lambda Adaptive Multi-Band Deblending Algorithm in R", "topics": [] }, { - "uid": "github/temuller/piscola", - "url": "https://github.com/temuller/piscola", - "rel": "/software/repository/github/temuller/piscola", - "avatar": "https://avatars.githubusercontent.com/u/20286110?v=4", - "description": "Supernova light-curve fitting code", - "topics": [ - "python", - "supernova", - "lightcurves", - "gaussian-processes", - "reproducible-science", - "data-science", - "data-driven", - "supernovae" - ] + "uid": "github/beckermr/calclens", + "url": "https://github.com/beckermr/calclens", + "rel": "/software/repository/github/beckermr/calclens", + "avatar": "https://avatars.githubusercontent.com/u/5296416?v=4", + "description": "Curved-sky grAvitational Lensing for Cosmological Light conE simulatioNS", + "topics": [] }, { - "uid": "github/temuller/hostphot", - "url": "https://github.com/temuller/hostphot", - "rel": "/software/repository/github/temuller/hostphot", - "avatar": "https://avatars.githubusercontent.com/u/20286110?v=4", - "description": "HostPhot: global and local photometry of galaxies hosting supernovae or other transients", + "uid": "github/bblodfon/emba", + "url": "https://github.com/bblodfon/emba", + "rel": "/software/repository/github/bblodfon/emba", + "avatar": "https://avatars2.githubusercontent.com/u/10909555?v=4", + "description": "Ensemble Model Biomarker Analysis R package", "topics": [ - "cosmology", - "supernova", - "galaxy", - "python", - "photometry", - "sep", - "sextractor", - "transients" + "r", + "r-package", + "biomarkers", + "ensemble-models" ] }, { - "uid": "github/rasg-affiliates/21cmSense", - "url": "https://github.com/rasg-affiliates/21cmSense", - "rel": "/software/repository/github/rasg-affiliates/21cmSense", - "avatar": "https://avatars.githubusercontent.com/u/57962800?v=4", - "description": "Code for calculating the sensitivity of 21cm experiments to the EoR power spectrum", + "uid": "github/helenqu/scone", + "url": "https://github.com/helenqu/scone", + "rel": "/software/repository/github/helenqu/scone", + "avatar": "https://avatars.githubusercontent.com/u/8826297?v=4", + "description": null, "topics": [] }, { - "uid": "github/rasg-affiliates/healvis", - "url": "https://github.com/rasg-affiliates/healvis", - "rel": "/software/repository/github/rasg-affiliates/healvis", - "avatar": "https://avatars.githubusercontent.com/u/57962800?v=4", - "description": "Visibility simulation off of HEALPix shells.", + "uid": "github/IBM/topography-searcher", + "url": "https://github.com/IBM/topography-searcher", + "rel": "/software/repository/github/IBM/topography-searcher", + "avatar": "https://avatars.githubusercontent.com/u/1459110?v=4", + "description": "This Python package is designed for mapping the solution space of machine learning models. An understanding of the organisation of the solution space can answer important questions about the reproducibility, explainability and performance of ML methods.", "topics": [] }, { - "uid": "github/SteveMacenski/slam_toolbox", - "url": "https://github.com/SteveMacenski/slam_toolbox", - "rel": "/software/repository/github/SteveMacenski/slam_toolbox", - "avatar": "https://avatars.githubusercontent.com/u/14944147?v=4", - "description": "Slam Toolbox for lifelong mapping and localization in potentially massive maps with ROS", + "uid": "github/IBM/fold2seq", + "url": "https://github.com/IBM/fold2seq", + "rel": "/software/repository/github/IBM/fold2seq", + "avatar": "https://avatars.githubusercontent.com/u/1459110?v=4", + "description": "Code for Fold2Seq paper from ICML 2021", "topics": [] }, { - "uid": "github/Jingxuan97/nemesispy", - "url": "https://github.com/Jingxuan97/nemesispy", - "rel": "/software/repository/github/Jingxuan97/nemesispy", - "avatar": "https://avatars.githubusercontent.com/u/64174530?v=4", - "description": "Tools for modelling exoplanet spectra", + "uid": "github/GunzIvan28/rMAP", + "url": "https://github.com/GunzIvan28/rMAP", + "rel": "/software/repository/github/GunzIvan28/rMAP", + "avatar": "https://avatars.githubusercontent.com/u/32091245?v=4", + "description": "Bacterial analysis Toolbox for profiling the Resistome of ESKAPE pathogens using WGS", "topics": [ - "exoplanet-analysis", - "exoplanet-atmospheres", - "exoplanets", - "radiative-transfer" + "bacteria", + "resistome", + "eskape", + "wgs", + "illumina" ] }, { - "uid": "github/sonjageorgievska/CClusTera", - "url": "https://github.com/sonjageorgievska/CClusTera", - "rel": "/software/repository/github/sonjageorgievska/CClusTera", - "avatar": "https://avatars0.githubusercontent.com/u/12493538?v=4", - "description": "A javascript library for interactive hierarchical visualization of 3D points (suitable for large hierarchical datasets) . Based on graphosaurus.js (https://github.com/frewsxcv/graphosaurus), which runs on Three.js. ", + "uid": "github/VNNikolaidis/nnlib2Rcpp", + "url": "https://github.com/VNNikolaidis/nnlib2Rcpp", + "rel": "/software/repository/github/VNNikolaidis/nnlib2Rcpp", + "avatar": "https://avatars.githubusercontent.com/u/39312360?v=4", + "description": "An R package for Neural Nets created using nnlib2", "topics": [] }, { - "uid": "github/MarkMageeAstro/Riddler", - "url": "https://github.com/MarkMageeAstro/Riddler", - "rel": "/software/repository/github/MarkMageeAstro/Riddler", - "avatar": "https://avatars.githubusercontent.com/u/53613663?v=4", + "uid": "github/aritrachakrabarty/GPS", + "url": "https://github.com/aritrachakrabarty/GPS", + "rel": "/software/repository/github/aritrachakrabarty/GPS", + "avatar": "https://avatars.githubusercontent.com/u/17982881?v=4", "description": null, "topics": [] }, { - "uid": "github/pypeit/PypeIt", - "url": "https://github.com/pypeit/PypeIt", - "rel": "/software/repository/github/pypeit/PypeIt", - "avatar": "https://avatars1.githubusercontent.com/u/41153172?v=4", - "description": "The Python Spectroscopic Data Reduction Pipeline", + "uid": "github/cadop/seg1d", + "url": "https://github.com/cadop/seg1d", + "rel": "/software/repository/github/cadop/seg1d", + "avatar": "https://avatars0.githubusercontent.com/u/11399119?v=4", + "description": "Automated segmentation of one-dimensional (1D) data", "topics": [] }, { - "uid": "github/SchmollerLab/Cell_ACDC", - "url": "https://github.com/SchmollerLab/Cell_ACDC", - "rel": "/software/repository/github/SchmollerLab/Cell_ACDC", - "avatar": "https://avatars.githubusercontent.com/u/79653821?v=4", - "description": "A Python GUI-based framework for segmentation, tracking and cell cycle annotations of micrscopy data", + "uid": "github/napakalas/casbert", + "url": "https://github.com/napakalas/casbert", + "rel": "/software/repository/github/napakalas/casbert", + "avatar": "https://avatars.githubusercontent.com/u/3060947?v=4", + "description": null, "topics": [] }, { - "uid": "github/rahulshah1397/LADDER", - "url": "https://github.com/rahulshah1397/LADDER", - "rel": "/software/repository/github/rahulshah1397/LADDER", - "avatar": "https://avatars.githubusercontent.com/u/28998141?v=4", - "description": "Public release of LADDER (https://doi.org/10.3847/1538-4365/ad5558) [arXiv: 2401.17029]", + "uid": "github/BapMel/mesocalc", + "url": "https://github.com/BapMel/mesocalc", + "rel": "/software/repository/github/BapMel/mesocalc", + "avatar": "https://avatars.githubusercontent.com/u/9018123?v=4", + "description": "MesoCalc is a Mesopotamian calculator.", "topics": [] }, { - "uid": "github/labxscut/ksak", - "url": "https://github.com/labxscut/ksak", - "rel": "/software/repository/github/labxscut/ksak", - "avatar": "https://avatars.githubusercontent.com/u/114787145?v=4", - "description": null, + "uid": "github/splicebox/PsiCLASS", + "url": "https://github.com/splicebox/PsiCLASS", + "rel": "/software/repository/github/splicebox/PsiCLASS", + "avatar": "https://avatars.githubusercontent.com/u/39348708?v=4", + "description": "Simultaneous multi-sample transcript assembler for RNA-seq data", "topics": [] }, { - "uid": "github/BitSeq/BitSeq", - "url": "https://github.com/BitSeq/BitSeq", - "rel": "/software/repository/github/BitSeq/BitSeq", - "avatar": "https://avatars.githubusercontent.com/u/6389353?v=4", - "description": "BitSeq code", + "uid": "github/vidarsko/ComFiT", + "url": "https://github.com/vidarsko/ComFiT", + "rel": "/software/repository/github/vidarsko/ComFiT", + "avatar": "https://avatars.githubusercontent.com/u/8513212?v=4", + "description": "A python library for simulating field theories with topological defects", "topics": [] }, { - "uid": "github/pnsaevik/effluent", - "url": "https://github.com/pnsaevik/effluent", - "rel": "/software/repository/github/pnsaevik/effluent", - "avatar": "https://avatars.githubusercontent.com/u/12728107?v=4", - "description": null, + "uid": "github/trygvrad/DF-XRM_viz", + "url": "https://github.com/trygvrad/DF-XRM_viz", + "rel": "/software/repository/github/trygvrad/DF-XRM_viz", + "avatar": "https://avatars.githubusercontent.com/u/2361452?v=4", + "description": "Visualization of DF-XRM", "topics": [] }, { - "uid": "github/EBI-Metagenomics/EukCC", - "url": "https://github.com/EBI-Metagenomics/EukCC", - "rel": "/software/repository/github/EBI-Metagenomics/EukCC", - "avatar": "https://avatars.githubusercontent.com/u/32897658?v=4", - "description": " Tool to estimate genome quality of microbial eukaryotes ", + "uid": "github/deepmind/alphafold", + "url": "https://github.com/deepmind/alphafold", + "rel": "/software/repository/github/deepmind/alphafold", + "avatar": "https://avatars.githubusercontent.com/u/8596759?v=4", + "description": "Open source code for AlphaFold.", "topics": [] }, { - "uid": "github/institut-de-genomique/HAPO-G", - "url": "https://github.com/institut-de-genomique/HAPO-G", - "rel": "/software/repository/github/institut-de-genomique/HAPO-G", - "avatar": "https://avatars.githubusercontent.com/u/6636916?v=4", - "description": "Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.", - "topics": [ - "genomics", - "polishing", - "bioinformatics", - "genome" - ] - }, - { - "uid": "github/mscroggs/symfem", - "url": "https://github.com/mscroggs/symfem", - "rel": "/software/repository/github/mscroggs/symfem", - "avatar": "https://avatars.githubusercontent.com/u/9850599?v=4", - "description": "A symbolic finite element definition library", + "uid": "github/mdtanker/polartoolkit", + "url": "https://github.com/mdtanker/polartoolkit", + "rel": "/software/repository/github/mdtanker/polartoolkit", + "avatar": "https://avatars.githubusercontent.com/u/81199856?v=4", + "description": "Helpful tools for polar researchers", "topics": [ - "finite-elements", - "symbolic-algebra" + "antarctica", + "bedmachine", + "pygmt", + "jupyter-notebook", + "bedmap", + "plotting", + "gmt", + "python", + "profiles", + "arctic", + "cryosphere", + "greenland", + "polar" ] }, { - "uid": "github/YosefLab/scvi-tools", - "url": "https://github.com/scverse/scvi-tools", - "rel": "/software/repository/github/YosefLab/scvi-tools", - "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", - "description": "Deep probabilistic analysis of single-cell omics data", - "topics": [ - "scrna-seq", - "variational-bayes", - "variational-autoencoder", - "cite-seq", - "single-cell-genomics", - "single-cell-rna-seq", - "deep-generative-model", - "human-cell-atlas", - "scverse", - "deep-learning" - ] + "uid": "github/casacore/casacore", + "url": "https://github.com/casacore/casacore", + "rel": "/software/repository/github/casacore/casacore", + "avatar": "https://avatars.githubusercontent.com/u/11732311?v=4", + "description": "Suite of C++ libraries for radio astronomy data processing", + "topics": [] }, { - "uid": "github/cadop/seg1d", - "url": "https://github.com/cadop/seg1d", - "rel": "/software/repository/github/cadop/seg1d", - "avatar": "https://avatars0.githubusercontent.com/u/11399119?v=4", - "description": "Automated segmentation of one-dimensional (1D) data", + "uid": "github/Multiversario/satcand", + "url": "https://github.com/Multiversario/satcand", + "rel": "/software/repository/github/Multiversario/satcand", + "avatar": "https://avatars.githubusercontent.com/u/50124332?v=4", + "description": "Tools to apply theoretical constraints of orbital stability and tidal migration to KOI exomoon candidates. ", "topics": [] }, { - "uid": "github/3fon3fonov/exostriker", - "url": "https://github.com/3fon3fonov/exostriker", - "rel": "/software/repository/github/3fon3fonov/exostriker", - "avatar": "https://avatars.githubusercontent.com/u/44244057?v=4", - "description": "Transit and Radial velocity Interactive Fitting tool for Orbital analysis and N-body simulations: The Exo-Striker", + "uid": "github/JLiangLab/TransVW", + "url": "https://github.com/fhaghighi/TransVW", + "rel": "/software/repository/github/JLiangLab/TransVW", + "avatar": "https://avatars.githubusercontent.com/u/31901902?v=4", + "description": "Official Keras & PyTorch Implementation and Pre-trained Models for TransVW", "topics": [ - "exoplanet", - "exoplanets", - "periodogram", - "radial-velocity", - "transit-modeling", - "ttv-modeling", - "multi-planet-systems" + "self-supervised-learning", + "transfer-learning", + "3d-models", + "medical-imaging", + "fine-tuning" ] }, { - "uid": "github/chadagreene/Tide-Model-Driver", - "url": "https://github.com/chadagreene/Tide-Model-Driver", - "rel": "/software/repository/github/chadagreene/Tide-Model-Driver", - "avatar": "https://avatars.githubusercontent.com/u/15901019?v=4", - "description": "Tide Model Driver for MATLAB, version 3.0", + "uid": "github/arangrhie/merfin", + "url": "https://github.com/arangrhie/merfin", + "rel": "/software/repository/github/arangrhie/merfin", + "avatar": "https://avatars.githubusercontent.com/u/12814549?v=4", + "description": "Evaluate variant calls and its combination with k-mer multiplicity", "topics": [] }, { - "uid": "github/indraniel/fqgrep", - "url": "https://github.com/indraniel/fqgrep", - "rel": "/software/repository/github/indraniel/fqgrep", - "avatar": "https://avatars.githubusercontent.com/u/42710?v=4", - "description": "An approximate sequence pattern matcher for FASTQ/FASTA files.", + "uid": "github/R-Computing-Lab/ggpedigree", + "url": "https://github.com/R-Computing-Lab/ggpedigree", + "rel": "/software/repository/github/R-Computing-Lab/ggpedigree", + "avatar": "https://avatars.githubusercontent.com/u/70174445?v=4", + "description": "Graphing pedigrees and family trees with ggplot2", "topics": [] }, { - "uid": "github/AlphonsG/Rainbow-Optical-Flow-For-ALI", - "url": "https://github.com/AlphonsG/Rainbow-Optical-Flow-For-ALI", - "rel": "/software/repository/github/AlphonsG/Rainbow-Optical-Flow-For-ALI", - "avatar": "https://avatars.githubusercontent.com/u/45003643?v=4", - "description": "Repository for software detailed in 'Rainbow: Automated Air-Liquid Interface Cell Culture Analysis Using Deep Optical Flow' software paper. See Readme for more details.", - "topics": [ - "deep-learning", - "biology", - "image-analysis", - "bioinformatics", - "optical-flow", - "python", - "pytorch" - ] - }, - { - "uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", - "url": "https://github.com/jmason86/James-s-EVE-Dimming-Index-JEDI", - "rel": "/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", - "avatar": "https://avatars.githubusercontent.com/u/947614?v=4", - "description": "Detect and characterize coronal dimming in the Solar Dynamics Observatory Extreme Ultraviolet Variability Experiment data", - "topics": [ - "solar-physics", - "machine-learning", - "space-weather", - "data-science", - "data-analysis" - ] - }, - { - "uid": "github/reedacartwright/dawg", - "url": "https://github.com/reedacartwright/dawg", - "rel": "/software/repository/github/reedacartwright/dawg", - "avatar": "https://avatars.githubusercontent.com/u/101918?v=4", - "description": "Simulating Sequence Evolution", + "uid": "github/sntioudis/papreca", + "url": "https://github.com/sntioudis/papreca", + "rel": "/software/repository/github/sntioudis/papreca", + "avatar": "https://avatars.githubusercontent.com/u/42137665?v=4", + "description": "PAPRECA hybrid off-lattice kinetic Monte Carlo/molecular dynamics (kMC/MD) simulator", "topics": [] }, { - "uid": "github/reedacartwright/ngila", - "url": "https://github.com/reedacartwright/ngila", - "rel": "/software/repository/github/reedacartwright/ngila", - "avatar": "https://avatars.githubusercontent.com/u/101918?v=4", - "description": "Ngila is a global alignment program that can align pairs of sequences using logarithmic and affine gap penalties.", + "uid": "github/mbaes/SpheCow", + "url": "https://github.com/mbaes/SpheCow", + "rel": "/software/repository/github/mbaes/SpheCow", + "avatar": "https://avatars.githubusercontent.com/u/8056588?v=4", + "description": "Flexible dynamical models for galaxies and dark matter haloes ", "topics": [] }, { - "uid": "github/jiujiezz/tsnad", - "url": "https://github.com/jiujiezz/tsnad", - "rel": "/software/repository/github/jiujiezz/tsnad", - "avatar": "https://avatars.githubusercontent.com/u/19741719?v=4", - "description": "Detecting somatic mutations and predicting tumor-specific neo-antigens", + "uid": "github/pyvisa/pyvisa", + "url": "https://github.com/pyvisa/pyvisa", + "rel": "/software/repository/github/pyvisa/pyvisa", + "avatar": "https://avatars.githubusercontent.com/u/29079824?v=4", + "description": "A Python package with bindings to the \"Virtual Instrument Software Architecture\" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB.", "topics": [] }, { - "uid": "github/omerveille/VSMOD", - "url": "https://github.com/omerveille/VSMOD", - "rel": "/software/repository/github/omerveille/VSMOD", - "avatar": "https://avatars.githubusercontent.com/u/8049869?v=4", - "description": null, + "uid": "github/djones1040/PythonPhot", + "url": "https://github.com/djones1040/PythonPhot", + "rel": "/software/repository/github/djones1040/PythonPhot", + "avatar": "https://avatars.githubusercontent.com/u/1512537?v=4", + "description": "Simple DAOPHOT-type photometry in Python translated from IDL AstroLib photometry algorithms. Please email me with bugs, suggestions, omissions, etc. The code is citable as part of the Astrophysics Source Code Library (http://ascl.net/1501.010).", "topics": [] }, { - "uid": "github/dolaver/calsagos", - "url": "https://github.com/dolaver/calsagos", - "rel": "/software/repository/github/dolaver/calsagos", - "avatar": "https://avatars.githubusercontent.com/u/77640476?v=4", - "description": "Config files for my GitHub profile.", + "uid": "github/pytorch/vision", + "url": "https://github.com/pytorch/vision", + "rel": "/software/repository/github/pytorch/vision", + "avatar": "https://avatars.githubusercontent.com/u/21003710?v=4", + "description": "Datasets, Transforms and Models specific to Computer Vision", "topics": [ - "config", - "github-config" + "computer-vision", + "machine-learning" ] }, { - "uid": "github/chfeder/turbulence_generator", - "url": "https://github.com/chfeder/turbulence_generator", - "rel": "/software/repository/github/chfeder/turbulence_generator", - "avatar": "https://avatars.githubusercontent.com/u/11024175?v=4", - "description": "Turbulence driving and initial conditions generator", + "uid": "github/esplint/IRACpm", + "url": "https://github.com/esplint/IRACpm", + "rel": "/software/repository/github/esplint/IRACpm", + "avatar": "https://avatars.githubusercontent.com/u/15931750?v=4", + "description": "IRACpm R Package: Applies a 7-8 order distortion correction to IRAC astrometric data from the Spitzer Space Telescope", "topics": [] }, { - "uid": "github/SWAT-Sheffield/SAC", - "url": "https://github.com/SWAT-Sheffield/SAC", - "rel": "/software/repository/github/SWAT-Sheffield/SAC", - "avatar": "https://avatars.githubusercontent.com/u/9036395?v=4", - "description": "The Sheffield Advanced Code", + "uid": "github/cochran4/GEMB", + "url": "https://github.com/cochran4/GEMB", + "rel": "/software/repository/github/cochran4/GEMB", + "avatar": "https://avatars3.githubusercontent.com/u/47640953?v=4", + "description": "Gene-set enrichment with math biology", "topics": [] }, { - "uid": "github/qurit/rt-utils", - "url": "https://github.com/qurit/rt-utils", - "rel": "/software/repository/github/qurit/rt-utils", - "avatar": "https://avatars.githubusercontent.com/u/58281965?v=4", - "description": "A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs. ", + "uid": "github/viromelab/tracespipe", + "url": "https://github.com/viromelab/tracespipe", + "rel": "/software/repository/github/viromelab/tracespipe", + "avatar": "https://avatars.githubusercontent.com/u/52006995?v=4", + "description": "Reconstruction and analysis of viral and host genomes at multi-organ level", "topics": [ - "dicom", - "rtstruct", - "mask", - "roi", - "pydicom", - "ai", - "medical-imaging", - "medical-image-processing", - "nuclear-medicine", - "typed", - "rt-structs", - "binary-masks", - "rt-utils" + "virus", + "metagenomics", + "pipeline", + "forensics", + "clinical", + "virology", + "mtdna", + "multi-organ", + "ngs", + "ngs-pipeline" ] }, { - "uid": "github/jboynyc/textnets", - "url": "https://github.com/jboynyc/textnets", - "rel": "/software/repository/github/jboynyc/textnets", - "avatar": "https://avatars1.githubusercontent.com/u/2187261?v=4", - "description": "Text analysis with networks.", + "uid": "github/MDU-PHL/emmtyper", + "url": "https://github.com/MDU-PHL/emmtyper", + "rel": "/software/repository/github/MDU-PHL/emmtyper", + "avatar": "https://avatars.githubusercontent.com/u/11035838?v=4", + "description": "emm Automatic Isolate Labeller", "topics": [ - "nlp", - "network-analysis", - "sociology", - "visualization", - "text-analysis", - "text-as-data", - "computational-social-science" + "bioinformatics", + "streptococcus-pyogenes", + "emm-typing", + "genotyping", + "genome-annotation" ] }, { - "uid": "github/metaOmics/MetaPath", - "url": "https://github.com/metaOmics/MetaPath", - "rel": "/software/repository/github/metaOmics/MetaPath", - "avatar": "https://avatars.githubusercontent.com/u/32662743?v=4", - "description": "Meta analysis pathway enrichment", + "uid": "github/MDU-PHL/abritamr", + "url": "https://github.com/MDU-PHL/abritamr", + "rel": "/software/repository/github/MDU-PHL/abritamr", + "avatar": "https://avatars.githubusercontent.com/u/11035838?v=4", + "description": "A pipeline for running AMRfinderPlus and collating results into functional classes", "topics": [] }, { - "uid": "github/DavidLapous/multipers", - "url": "https://github.com/DavidLapous/multipers", - "rel": "/software/repository/github/DavidLapous/multipers", - "avatar": "https://avatars.githubusercontent.com/u/15857585?v=4", - "description": "[NeurIPS2023,ICML2024] Multiparameter Persistence for Machine Learning ", - "topics": [ - "persistent-homology", - "topological-data-analysis", - "tda", - "python", - "cpp", - "cython", - "neurips-2023", - "icml-2024", - "multiparameter-persistence" - ] + "uid": "github/MJCliffe/PASCal", + "url": "https://github.com/MJCliffe/PASCal", + "rel": "/software/repository/github/MJCliffe/PASCal", + "avatar": "https://avatars.githubusercontent.com/u/10605244?v=4", + "description": "Codebase for PASCal strain calculator", + "topics": [] }, { - "uid": "github/SDTC-CPMed/scDrugPrio", - "url": "https://github.com/SDTC-CPMed/scDrugPrio", - "rel": "/software/repository/github/SDTC-CPMed/scDrugPrio", - "avatar": "https://avatars.githubusercontent.com/u/61544709?v=4", - "description": "Network analyses of single cell-based digital twins for personalized treatment of inflammatory disease", + "uid": "github/metageni/FOCUS", + "url": "https://github.com/metageni/FOCUS", + "rel": "/software/repository/github/metageni/FOCUS", + "avatar": "https://avatars.githubusercontent.com/u/614762?v=4", + "description": "FOCUS: An Agile Profiler for Metagenomic Data", "topics": [ - "single-cell" + "metagenomes", + "kmer", + "identify-organisms", + "bioinformatics", + "microbiome" ] }, { - "uid": "github/marinebon/obisindicators", - "url": "https://github.com/marinebon/obisindicators", - "rel": "/software/repository/github/marinebon/obisindicators", - "avatar": "https://avatars.githubusercontent.com/u/11562325?v=4", - "description": "R package for generating indicators from OBIS", - "topics": [ - "biodiversity", - "marine", - "marine-biology", - "r" - ] + "uid": "github/ToyotaCRDL/mahos", + "url": "https://github.com/ToyotaCRDL/mahos", + "rel": "/software/repository/github/ToyotaCRDL/mahos", + "avatar": "https://avatars.githubusercontent.com/u/91861326?v=4", + "description": "Measurement Automation Handling and Orchestration System", + "topics": [] }, { - "uid": "github/ntveem/sterile-dm", - "url": "https://github.com/ntveem/sterile-dm", - "rel": "/software/repository/github/ntveem/sterile-dm", - "avatar": "https://avatars.githubusercontent.com/u/9044666?v=4", - "description": "A program to follow the production of sterile neutrino dark matter", + "uid": "github/ColmTalbot/gwpopulation", + "url": "https://github.com/ColmTalbot/gwpopulation", + "rel": "/software/repository/github/ColmTalbot/gwpopulation", + "avatar": "https://avatars.githubusercontent.com/u/25602909?v=4", + "description": "CPU/GPU agnostic gravitational-wave population inference", "topics": [] }, { - "uid": "github/buschlab/fhirspark", - "url": "https://github.com/buschlab/fhirspark", - "rel": "/software/repository/github/buschlab/fhirspark", - "avatar": "https://avatars.githubusercontent.com/u/41995646?v=4", + "uid": "github/tatekawa-astron/3LPT-init", + "url": "https://github.com/tatekawa-astron/3LPT-init", + "rel": "/software/repository/github/tatekawa-astron/3LPT-init", + "avatar": "https://avatars.githubusercontent.com/u/47408759?v=4", "description": null, "topics": [] }, { - "uid": "github/CompiledAtBirth/pyCARPool", - "url": "https://github.com/CompiledAtBirth/pyCARPool", - "rel": "/software/repository/github/CompiledAtBirth/pyCARPool", - "avatar": "https://avatars.githubusercontent.com/u/47000650?v=4", + "uid": "github/tatekawa-astron/PN", + "url": "https://github.com/tatekawa-astron/PN", + "rel": "/software/repository/github/tatekawa-astron/PN", + "avatar": "https://avatars.githubusercontent.com/u/47408759?v=4", "description": null, "topics": [] }, { - "uid": "github/Yu606/odyssey", - "url": "https://github.com/Yu606/odyssey", - "rel": "/software/repository/github/Yu606/odyssey", - "avatar": "https://avatars.githubusercontent.com/u/31619679?v=4", - "description": null, + "uid": "github/AmruteLab/PyChelator", + "url": "https://github.com/AmruteLab/PyChelator", + "rel": "/software/repository/github/AmruteLab/PyChelator", + "avatar": "https://avatars.githubusercontent.com/u/146719149?v=4", + "description": "PyChelator performs metal chelator calculations taking into account pH, temperature, and ionic strength", "topics": [] }, { - "uid": "github/BrownDwarf/gollum", - "url": "https://github.com/BrownDwarf/gollum", - "rel": "/software/repository/github/BrownDwarf/gollum", - "avatar": "https://avatars.githubusercontent.com/u/8246702?v=4", - "description": "A microservice for programmatic access to precomputed synthetic spectral model grids in astronomy", + "uid": "github/xstarkit/mpi_xstar", + "url": "https://github.com/xstarkit/MPI_XSTAR", + "rel": "/software/repository/github/xstarkit/mpi_xstar", + "avatar": "https://avatars.githubusercontent.com/u/20077044?v=4", + "description": "MPI_XSTAR - MPI-based Parallelization of XSTAR Photoionization Program", "topics": [ - "astronomy", - "spectroscopy", - "science", - "astrophysics", - "stars", - "physics", - "python" + "mpi-xstar", + "xstar-photoionization" ] }, { - "uid": "github/tronsgaard/barycorr", - "url": "https://github.com/tronsgaard/barycorr", - "rel": "/software/repository/github/tronsgaard/barycorr", - "avatar": "https://avatars.githubusercontent.com/u/10196208?v=4", - "description": "Python interface for barycentric correction web applets", - "topics": [] - }, - { - "uid": "github/xoopR/set6", - "url": "https://github.com/xoopR/set6", - "rel": "/software/repository/github/xoopR/set6", - "avatar": "https://avatars2.githubusercontent.com/u/62353263?v=4", - "description": "R6 object-oriented interface for mathematical sets.", + "uid": "github/bioinform/somaticseq", + "url": "https://github.com/bioinform/somaticseq", + "rel": "/software/repository/github/bioinform/somaticseq", + "avatar": "https://avatars.githubusercontent.com/u/7563198?v=4", + "description": "An ensemble approach to accurately detect somatic mutations using SomaticSeq", "topics": [ - "r", - "sets", - "oop", - "r6", - "intervals" + "somatic-variants", + "cancer-genomics" ] }, { - "uid": "github/cvjena/JeFaPaTo", - "url": "https://github.com/cvjena/JeFaPaTo", - "rel": "/software/repository/github/cvjena/JeFaPaTo", - "avatar": "https://avatars.githubusercontent.com/u/1272801?v=4", - "description": "JeFaPaTo - A tool for the analysis of facial features", - "topics": [] + "uid": "github/desResLab/LINFA", + "url": "https://github.com/desResLab/LINFA", + "rel": "/software/repository/github/desResLab/LINFA", + "avatar": "https://avatars.githubusercontent.com/u/39108751?v=4", + "description": "A Python library for variational inference with normalizing flow and annealing", + "topics": [ + "annealing", + "normalizing-flows", + "variational-inference", + "computational-expensive-models" + ] }, { - "uid": "github/cvjena/freestylo", - "url": "https://github.com/cvjena/freestylo", - "rel": "/software/repository/github/cvjena/freestylo", - "avatar": "https://avatars.githubusercontent.com/u/1272801?v=4", - "description": "Stylistic Device Detection Tool", + "uid": "github/davidsoergel/rtax", + "url": "https://github.com/davidsoergel/rtax", + "rel": "/software/repository/github/davidsoergel/rtax", + "avatar": "https://avatars.githubusercontent.com/u/1347381?v=4", + "description": "Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene.", "topics": [] }, { - "uid": "github/HadrienG/InSilicoSeq", - "url": "https://github.com/HadrienG/InSilicoSeq", - "rel": "/software/repository/github/HadrienG/InSilicoSeq", - "avatar": "https://avatars.githubusercontent.com/u/7337110?v=4", - "description": ":rocket: A sequencing simulator", + "uid": "github/fcastagna/preprofit", + "url": "https://github.com/fcastagna/preprofit", + "rel": "/software/repository/github/fcastagna/preprofit", + "avatar": "https://avatars.githubusercontent.com/u/44572424?v=4", + "description": "Pressure Profile Fitter for galaxy clusters in Python", "topics": [ - "bioinformatics", - "illumina-sequencing", - "sequencing", - "simulation", - "metagenomics" + "python", + "galaxy-clusters", + "pressure-profile", + "bayesian" ] }, { - "uid": "github/sjteresi/TE_Density", - "url": "https://github.com/sjteresi/TE_Density", - "rel": "/software/repository/github/sjteresi/TE_Density", - "avatar": "https://avatars.githubusercontent.com/u/27462523?v=4", - "description": "Python script calculating transposable element density for all genes in a genome. Publication: https://mobilednajournal.biomedcentral.com/articles/10.1186/s13100-022-00264-4", + "uid": "github/fcastagna/JoXSZ", + "url": "https://github.com/fcastagna/JoXSZ", + "rel": "/software/repository/github/fcastagna/JoXSZ", + "avatar": "https://avatars.githubusercontent.com/u/44572424?v=4", + "description": "Joint X-ray and SZ data fitting code for galaxy clusters in Python", "topics": [ - "transposable-elements", - "genome" + "python", + "astrostatistics", + "mcmc", + "galaxy-clusters" ] }, { - "uid": "github/opencobra/cobrapy", - "url": "https://github.com/opencobra/cobrapy", - "rel": "/software/repository/github/opencobra/cobrapy", - "avatar": "https://avatars.githubusercontent.com/u/2708410?v=4", - "description": "COBRApy is a package for constraint-based modeling of metabolic networks.", + "uid": "github/benstahl92/deepSIP", + "url": "https://github.com/benstahl92/deepSIP", + "rel": "/software/repository/github/benstahl92/deepSIP", + "avatar": "https://avatars.githubusercontent.com/u/13010209?v=4", + "description": "Deep Learning of Supernova Ia Parameters", "topics": [ - "modeling", - "metabolic-models", - "metabolic-network", - "metabolism", - "flux", - "bioinformatics", - "biochemistry", - "computational-biology", - "systems-biology", - "cell-design", - "strain-engineering", - "python", - "cobra", - "sbml", - "sbml-model", - "sbml-simulation" + "supernovae", + "supernova-ia-identification", + "deep-learning", + "convolutional-neural-networks", + "transients", + "astronomy", + "astrophysics", + "spectra", + "cosmology" ] }, { - "uid": "github/onnela-lab/beiwe-backend", - "url": "https://github.com/onnela-lab/beiwe-backend", - "rel": "/software/repository/github/onnela-lab/beiwe-backend", - "avatar": "https://avatars.githubusercontent.com/u/12967946?v=4", - "description": "Beiwe is a smartphone-based digital phenotyping research platform. This is the Beiwe backend code", + "uid": "github/TRI-AMDD/GMP-featurizer", + "url": "https://github.com/TRI-AMDD/GMP-featurizer", + "rel": "/software/repository/github/TRI-AMDD/GMP-featurizer", + "avatar": "https://avatars.githubusercontent.com/u/62159728?v=4", + "description": "Feature calculator for GMP features", "topics": [] }, { - "uid": "github/justincfeng/PoMiN", - "url": "https://github.com/justincfeng/PoMiN", - "rel": "/software/repository/github/justincfeng/PoMiN", - "avatar": "https://avatars.githubusercontent.com/u/37278639?v=4", - "description": "PoMiN is a Post-Minkowskian N-Body Solver", + "uid": "github/koustavchandra/gwforge", + "url": "https://github.com/koustavchandra/gwforge", + "rel": "/software/repository/github/koustavchandra/gwforge", + "avatar": "https://avatars.githubusercontent.com/u/56917539?v=4", + "description": "A lightweight code to generate mock gravitational wave detector data using user-defined population and arbritary detector sensitivity.", "topics": [] }, { - "uid": "github/raredd/kmdata", - "url": "https://github.com/raredd/kmdata", - "rel": "/software/repository/github/raredd/kmdata", - "avatar": "https://avatars.githubusercontent.com/u/6332718?v=4", - "description": "kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical trials", + "uid": "github/RadioAstronomySoftwareGroup/pyradiosky", + "url": "https://github.com/RadioAstronomySoftwareGroup/pyradiosky", + "rel": "/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", + "avatar": "https://avatars.githubusercontent.com/u/41453363?v=4", + "description": "Python objects and interfaces for representing diffuse, extended and compact astrophysical radio sources", "topics": [] }, { - "uid": "github/v-morello/riptide", - "url": "https://github.com/v-morello/riptide", - "rel": "/software/repository/github/v-morello/riptide", - "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", - "description": "Pulsar searching with the Fast Folding Algorithm (FFA)", - "topics": [] + "uid": "github/RadioAstronomySoftwareGroup/pyuvdata", + "url": "https://github.com/RadioAstronomySoftwareGroup/pyuvdata", + "rel": "/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", + "avatar": "https://avatars.githubusercontent.com/u/41453363?v=4", + "description": "A pythonic interface for radio astronomy interferometry data (uvfits, miriad, others)", + "topics": [ + "python", + "astronomy", + "radio-astronomy", + "interferometry" + ] }, { - "uid": "github/v-morello/clfd", - "url": "https://github.com/v-morello/clfd", - "rel": "/software/repository/github/v-morello/clfd", - "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", - "description": " Smart RFI removal algorithms to be used on folded pulsar search and timing data", - "topics": [] + "uid": "github/Jingxuan97/nemesispy", + "url": "https://github.com/Jingxuan97/nemesispy", + "rel": "/software/repository/github/Jingxuan97/nemesispy", + "avatar": "https://avatars.githubusercontent.com/u/64174530?v=4", + "description": "Tools for modelling exoplanet spectra", + "topics": [ + "exoplanet-analysis", + "exoplanet-atmospheres", + "exoplanets", + "radiative-transfer" + ] }, { - "uid": "github/v-morello/iqrm", - "url": "https://github.com/v-morello/iqrm", - "rel": "/software/repository/github/v-morello/iqrm", - "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", - "description": "A minimal implementation of the IQRM interference flagging algorithm for radio pulsar and transient searches", + "uid": "github/kuenzelab/ENDURE", + "url": "https://github.com/kuenzelab/ENDURE", + "rel": "/software/repository/github/kuenzelab/ENDURE", + "avatar": "https://avatars.githubusercontent.com/u/121185423?v=4", + "description": "Tool for energy breakdown analysis of protein designs", "topics": [] }, { - "uid": "github/francescoa97outlook/pyExoRaMa", - "url": "https://github.com/francescoa97outlook/pyExoRaMa", - "rel": "/software/repository/github/francescoa97outlook/pyExoRaMa", - "avatar": "https://avatars.githubusercontent.com/u/70694319?v=4", - "description": null, + "uid": "github/amueller/word_cloud", + "url": "https://github.com/amueller/word_cloud", + "rel": "/software/repository/github/amueller/word_cloud", + "avatar": "https://avatars.githubusercontent.com/u/449558?v=4", + "description": "A little word cloud generator in Python", "topics": [] }, { - "uid": "github/cboursnell/crb-blast", - "url": "https://github.com/cboursnell/crb-blast", - "rel": "/software/repository/github/cboursnell/crb-blast", - "avatar": "https://avatars.githubusercontent.com/u/969401?v=4", - "description": "Conditional Reciprocal Best Blast", + "uid": "github/Caltech-IPAC/kete", + "url": "https://github.com/Caltech-IPAC/kete", + "rel": "/software/repository/github/Caltech-IPAC/kete", + "avatar": "https://avatars.githubusercontent.com/u/9708378?v=4", + "description": "Kete Solar System Survey tools", "topics": [] }, { - "uid": "github/LuisScoccola/persistable", - "url": "https://github.com/LuisScoccola/persistable", - "rel": "/software/repository/github/LuisScoccola/persistable", - "avatar": "https://avatars.githubusercontent.com/u/1679929?v=4", - "description": "density-based clustering for exploratory data analysis based on multi-parameter persistence", - "topics": [ - "cluster-analysis", - "clustering", - "clustering-algorithm", - "machine-learning", - "machine-learning-algorithms", - "topological-data-analysis", - "unsupervised-learning" - ] + "uid": "github/Caltech-IPAC/Montage", + "url": "https://github.com/Caltech-IPAC/Montage", + "rel": "/software/repository/github/Caltech-IPAC/Montage", + "avatar": "https://avatars.githubusercontent.com/u/9708378?v=4", + "description": "Image Mosaics for Astronomers", + "topics": [] }, { - "uid": "github/bwinkel/cygrid", - "url": "https://github.com/bwinkel/cygrid", - "rel": "/software/repository/github/bwinkel/cygrid", - "avatar": "https://avatars.githubusercontent.com/u/6582333?v=4", - "description": "Cygrid is a cython-powered convolution-based gridding module for astronomy", + "uid": "github/engyasin/Offline_MOT", + "url": "https://github.com/engyasin/Offline_MOT", + "rel": "/software/repository/github/engyasin/Offline_MOT", + "avatar": "https://avatars.githubusercontent.com/u/15736151?v=4", + "description": "Multiple traffic entities detection and tracking from bird-view drone stationary videos https://engyasin.github.io/Offline_MOT/", "topics": [ - "astronomy", - "python", - "gridding", - "resampling" + "multiple-object-tracking", + "drone", + "object-detection", + "python" ] }, { - "uid": "github/PaulSt/NGSTrefftz", - "url": "https://github.com/PaulSt/NGSTrefftz", - "rel": "/software/repository/github/PaulSt/NGSTrefftz", - "avatar": "https://avatars.githubusercontent.com/u/28690104?v=4", - "description": "Add-On to NGSolve for Trefftz methods", + "uid": "github/MehrnooshTahani/MappingBLOS_MolecularClouds", + "url": "https://github.com/MehrnooshTahani/MappingBLOS_MolecularClouds", + "rel": "/software/repository/github/MehrnooshTahani/MappingBLOS_MolecularClouds", + "avatar": "https://avatars.githubusercontent.com/u/38359939?v=4", + "description": "Software to determine line of sight magnetic fields of molecular clouds (Tahani et al. 2018)", "topics": [ - "numerical-methods", - "finite-element-method", - "trefftz-methods", - "open-source" + "faraday-rotation", + "molecular-clouds", + "magnetic-fields" ] }, { - "uid": "github/jianlin-cheng/DRCon", - "url": "https://github.com/jianlin-cheng/DRCon", - "rel": "/software/repository/github/jianlin-cheng/DRCon", - "avatar": "https://avatars.githubusercontent.com/u/20481009?v=4", - "description": "Deep dilated convolutional residual neural network for predicting interchain contacts of protein homodimers", + "uid": "github/mlaparie/sigh", + "url": "https://github.com/mlaparie/sigh", + "rel": "/software/repository/github/mlaparie/sigh", + "avatar": "https://avatars.githubusercontent.com/u/80409402?v=4", + "description": "sigh, a program to cure optimism and automatically scrape worldwide data about reported disaster and perturbation events.", "topics": [] }, { - "uid": "github/lucaborsato/trades", - "url": "https://github.com/lucaborsato/trades", - "rel": "/software/repository/github/lucaborsato/trades", - "avatar": "https://avatars.githubusercontent.com/u/8124268?v=4", - "description": "Fortran90 code for the orbital simulation of exoplanetary system with simultaneous fit of Transit Times and Radial Velocities. ", - "topics": [] + "uid": "github/mlaparie/phidget-tools", + "url": "https://github.com/mlaparie/phidget-tools", + "rel": "/software/repository/github/mlaparie/phidget-tools", + "avatar": "https://avatars.githubusercontent.com/u/80409402?v=4", + "description": "Terminal tools to record/monitor from Phidget 1048_1B USB-thermocouple devices", + "topics": [ + "data", + "data-visualization", + "data-visualisation", + "thermocouple", + "temperature", + "temperature-sensor", + "temperature-monitoring", + "phidgets", + "phidget", + "tui", + "cli", + "terminal-based", + "terminal-app", + "terminal", + "command-line", + "command-line-tool", + "commandline" + ] }, { - "uid": "github/TORCH-Consortium/MAGMA", - "url": "https://github.com/TORCH-Consortium/MAGMA", - "rel": "/software/repository/github/TORCH-Consortium/MAGMA", - "avatar": "https://avatars.githubusercontent.com/u/101628119?v=4", - "description": "A pipeline for comprehensive genomic analyses of Mycobacterium tuberculosis with a focus on clinical decision making as well as research", + "uid": "github/eweitz/ideogram", + "url": "https://github.com/eweitz/ideogram", + "rel": "/software/repository/github/eweitz/ideogram", + "avatar": "https://avatars1.githubusercontent.com/u/1334561?v=4", + "description": "Chromosome visualization for the web", "topics": [ + "visualization", "genomics", - "pipeline", - "mycobacterium-tuberculosis", - "tuberculosis", - "nextflow-pipeline", - "nextflow" + "cytogenetics", + "karyotype", + "cancer-genomics", + "comparative-genomics", + "personal-genomics" ] }, { - "uid": "github/hansenjohnson/WhaleMap", - "url": "https://github.com/hansenjohnson/WhaleMap", - "rel": "/software/repository/github/hansenjohnson/WhaleMap", - "avatar": "https://avatars.githubusercontent.com/u/24778637?v=4", - "description": "Collate and visualize whale survey results in the NW Atlantic", - "topics": [] - }, - { - "uid": "github/JeremyLezmy/hypergal", - "url": "https://github.com/JeremyLezmy/hypergal", - "rel": "/software/repository/github/JeremyLezmy/hypergal", - "avatar": "https://avatars.githubusercontent.com/u/49833410?v=4", - "description": "Pipeline for supernovae extraction and classification within the SEDm/ZTF project.", - "topics": [] - }, - { - "uid": "github/lofar-astron/DP3", - "url": "https://github.com/lofar-astron/DP3", - "rel": "/software/repository/github/lofar-astron/DP3", - "avatar": "https://avatars.githubusercontent.com/u/13587881?v=4", - "description": "DP3: streaming processing pipeline for radio interferometric data", + "uid": "github/rreischke/OneCovariance", + "url": "https://github.com/rreischke/OneCovariance", + "rel": "/software/repository/github/rreischke/OneCovariance", + "avatar": "https://avatars.githubusercontent.com/u/31727230?v=4", + "description": "OneCovariance code for KiDS to play", "topics": [] }, { - "uid": "github/lofar-astron/RMextract", - "url": "https://github.com/lofar-astron/RMextract", - "rel": "/software/repository/github/lofar-astron/RMextract", - "avatar": "https://avatars.githubusercontent.com/u/13587881?v=4", - "description": "extract TEC, vTEC, Earthmagnetic field and Rotation Measures from GPS and WMM data for radio interferometry observations ", + "uid": "github/rreischke/frb_covariance", + "url": "https://github.com/rreischke/frb_covariance", + "rel": "/software/repository/github/rreischke/frb_covariance", + "avatar": "https://avatars.githubusercontent.com/u/31727230?v=4", + "description": null, "topics": [] }, { - "uid": "github/statsmodels/statsmodels", - "url": "https://github.com/statsmodels/statsmodels", - "rel": "/software/repository/github/statsmodels/statsmodels", - "avatar": "https://avatars3.githubusercontent.com/u/717666?v=4", - "description": "Statsmodels: statistical modeling and econometrics in Python", + "uid": "github/AOtools/aotools", + "url": "https://github.com/AOtools/aotools", + "rel": "/software/repository/github/AOtools/aotools", + "avatar": "https://avatars.githubusercontent.com/u/17499079?v=4", + "description": "A useful set of tools for Adaptive Optics in Python", "topics": [ + "adaptive-optics", "python", - "statistics", - "econometrics", - "data-analysis", - "generalized-linear-models", - "timeseries-analysis", - "regression-models" + "astronomy-library", + "python-package" ] }, { - "uid": "github/weber1158/eds-classification", - "url": "https://github.com/weber1158/eds-classification", - "rel": "/software/repository/github/weber1158/eds-classification", - "avatar": "https://avatars.githubusercontent.com/u/133900499?v=4", - "description": "Functions for working with SEM-EDS data in MATLAB, including different algorithms for performing mineral classification.", + "uid": "github/brsynth/rp2paths", + "url": "https://github.com/brsynth/rp2paths", + "rel": "/software/repository/github/brsynth/rp2paths", + "avatar": "https://avatars.githubusercontent.com/u/33053548?v=4", + "description": "RetroPath2.0 to pathways", "topics": [] }, { - "uid": "github/mpi4jax/mpi4jax", - "url": "https://github.com/mpi4jax/mpi4jax", - "rel": "/software/repository/github/mpi4jax/mpi4jax", - "avatar": "https://avatars.githubusercontent.com/u/81360121?v=4", - "description": "Zero-copy MPI communication of JAX arrays, for turbo-charged HPC applications in Python :zap:", + "uid": "github/llrs/experDesign", + "url": "https://github.com/llrs/experDesign", + "rel": "/software/repository/github/llrs/experDesign", + "avatar": "https://avatars.githubusercontent.com/u/6818218?v=4", + "description": "Design experiments distributed in several batches", "topics": [ - "mpi", - "jax", - "jit", - "xla", - "gpu", - "parallel-computing", - "high-performance-computing" + "experiment-design", + "batch", + "cran" ] }, { - "uid": "github/JamieDietrich/dynamite", - "url": "https://github.com/JamieDietrich/dynamite", - "rel": "/software/repository/github/JamieDietrich/dynamite", - "avatar": "https://avatars.githubusercontent.com/u/67653347?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/pcingola/SnpEff", - "url": "https://github.com/pcingola/SnpEff", - "rel": "/software/repository/github/pcingola/SnpEff", - "avatar": "https://avatars.githubusercontent.com/u/1334427?v=4", - "description": "genetic variant annotation and effect prediction toolbox - tool", - "topics": [] + "uid": "github/DaymudeLab/assembly-theory", + "url": "https://github.com/DaymudeLab/assembly-theory", + "rel": "/software/repository/github/DaymudeLab/assembly-theory", + "avatar": "https://avatars.githubusercontent.com/u/120212518?v=4", + "description": "Open, reproducible calculation of assembly indices in Rust, Python, or the command line", + "topics": [ + "assembly-theory" + ] }, { - "uid": "github/GRChombo/GRFolres", - "url": "https://github.com/GRTLCollaboration/GRFolres", - "rel": "/software/repository/github/GRChombo/GRFolres", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "Extension to GRChombo for Modified Gravity simulations", - "topics": [] + "uid": "github/henrikmelin/h3ppy", + "url": "https://github.com/henrikmelin/h3ppy", + "rel": "/software/repository/github/henrikmelin/h3ppy", + "avatar": "https://avatars.githubusercontent.com/u/345794?v=4", + "description": "A python package for modelling and fitting H3+ spectra", + "topics": [ + "astronomy", + "data-analysis", + "planetary-science", + "python3", + "spectroscopy" + ] }, { - "uid": "github/GRChombo/GRChombo", - "url": "https://github.com/GRChombo/GRChombo", - "rel": "/software/repository/github/GRChombo/GRChombo", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "An AMR based open-source code for numerical relativity simulations.", + "uid": "github/dewberryjanosz/polyrot", + "url": "https://github.com/dewberryjanosz/polyrot", + "rel": "/software/repository/github/dewberryjanosz/polyrot", + "avatar": "https://avatars.githubusercontent.com/u/54084498?v=4", + "description": "A small package for computing polytropic models of rapidly rotating planets and stars", "topics": [] }, { - "uid": "github/GRChombo/GRDzhadzha", - "url": "https://github.com/GRTLCollaboration/GRDzhadzha", - "rel": "/software/repository/github/GRChombo/GRDzhadzha", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "A code to evolve matter on curved spacetimes with an analytic time and space dependence, e.g. black holes", + "uid": "github/christopherlovell/sengi", + "url": "https://github.com/christopherlovell/sengi", + "rel": "/software/repository/github/christopherlovell/sengi", + "avatar": "https://avatars.githubusercontent.com/u/4648092?v=4", + "description": "A small, fast, interactive viewer for SPS spectral outputs", "topics": [] }, { - "uid": "github/dolfin-adjoint/pyadjoint", - "url": "https://github.com/dolfin-adjoint/pyadjoint", - "rel": "/software/repository/github/dolfin-adjoint/pyadjoint", - "avatar": "https://avatars.githubusercontent.com/u/58938451?v=4", - "description": "The algorithmic differentation tool pyadjoint and add-ons.", - "topics": [] + "uid": "github/nlppln/nlppln", + "url": "https://github.com/nlppln/nlppln", + "rel": "/software/repository/github/nlppln/nlppln", + "avatar": "https://avatars3.githubusercontent.com/u/25154063?v=4", + "description": "NLP pipeline software using common workflow language", + "topics": [ + "nlp", + "cwl", + "workflow", + "pipeline", + "text-mining" + ] }, { - "uid": "github/genner-lab/meta-fish-lib", - "url": "https://github.com/genner-lab/meta-fish-lib", - "rel": "/software/repository/github/genner-lab/meta-fish-lib", - "avatar": "https://avatars.githubusercontent.com/u/74772033?v=4", - "description": "A generalised, dynamic DNA reference library for metabarcoding of fishes", + "uid": "github/TransDecoder/wiki", + "url": null, + "rel": "/software/repository/github/TransDecoder/wiki", + "avatar": "", + "description": "identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.", "topics": [] }, { - "uid": "github/dparks1134/RefineM", - "url": "https://github.com/donovan-h-parks/RefineM", - "rel": "/software/repository/github/dparks1134/RefineM", - "avatar": "https://avatars.githubusercontent.com/u/3688336?v=4", - "description": "A toolbox for improving metagenome-assembled genomes.", + "uid": "github/muttenthalerlab/PeptideMiner", + "url": "https://github.com/muttenthalerlab/PeptideMiner", + "rel": "/software/repository/github/muttenthalerlab/PeptideMiner", + "avatar": "https://avatars.githubusercontent.com/u/177279911?v=4", + "description": null, "topics": [] }, { - "uid": "github/LidkeLab/matlab-instrument-control", - "url": "https://github.com/LidkeLab/matlab-instrument-control", - "rel": "/software/repository/github/LidkeLab/matlab-instrument-control", - "avatar": "https://avatars.githubusercontent.com/u/13421505?v=4", - "description": "A collection of MATLAB classes to control various equipment used in fluorescence microscopy", + "uid": "github/baxmittens/VTUFileHandler", + "url": "https://github.com/baxmittens/VTUFileHandler.jl", + "rel": "/software/repository/github/baxmittens/VTUFileHandler", + "avatar": "https://avatars.githubusercontent.com/u/100423479?v=4", + "description": "A VTU library in the Julia language that implements an algebra for basic mathematical operations on VTU data.", "topics": [] }, { - "uid": "github/marcelm/cutadapt", - "url": "https://github.com/marcelm/cutadapt", - "rel": "/software/repository/github/marcelm/cutadapt", - "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", - "description": "finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.", - "topics": [ - "python", - "bioinformatics" - ] - }, - { - "uid": "github/marcelm/dnaio", - "url": "https://github.com/marcelm/dnaio", - "rel": "/software/repository/github/marcelm/dnaio", - "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", - "description": "Read and write FASTQ and FASTA efficiently from Python", - "topics": [ - "python", - "bioinformatics" - ] - }, - { - "uid": "github/marcelm/tinyalign", - "url": "https://github.com/marcelm/tinyalign", - "rel": "/software/repository/github/marcelm/tinyalign", - "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", - "description": "numerical representation of differences between strings", + "uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", + "url": "https://github.com/baxmittens/OpenGeoSysUncertaintyQuantification.jl", + "rel": "/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", + "avatar": "https://avatars.githubusercontent.com/u/100423479?v=4", + "description": "An uncertainty quantification toolbox for OpenGeoSys 6", "topics": [] }, { - "uid": "github/marcelm/alignlib", - "url": "https://github.com/marcelm/tinyalign", - "rel": "/software/repository/github/marcelm/alignlib", - "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", - "description": "edit and Hamming distances for biological sequences", + "uid": "github/toshiyan/cmblensplus", + "url": "https://github.com/toshiyan/cmblensplus", + "rel": "/software/repository/github/toshiyan/cmblensplus", + "avatar": "https://avatars.githubusercontent.com/u/16786258?v=4", + "description": null, "topics": [] }, { - "uid": "github/fjankowsk/fitpdf", - "url": "https://github.com/fjankowsk/fitpdf", - "rel": "/software/repository/github/fjankowsk/fitpdf", - "avatar": "https://avatars.githubusercontent.com/u/10989149?v=4", - "description": "Bayesian distribution fitting for pulsar and FRB data.", - "topics": [ - "astrophysics", - "data-analysis", - "distributions", - "fast-radio-bursts", - "fitting", - "fitting-distributions", - "pulsars", - "python" - ] + "uid": "github/UNSW-CEEM/nempy", + "url": "https://github.com/UNSW-CEEM/nempy", + "rel": "/software/repository/github/UNSW-CEEM/nempy", + "avatar": "https://avatars.githubusercontent.com/u/33536784?v=4", + "description": "A flexible tool kit for modelling Australia's National Electricity Market dispatch procedure.", + "topics": [] }, { - "uid": "github/fjankowsk/scatfit", - "url": "https://github.com/fjankowsk/scatfit", - "rel": "/software/repository/github/fjankowsk/scatfit", - "avatar": "https://avatars.githubusercontent.com/u/10989149?v=4", - "description": "Scattering fits of Fast Radio Burst and pulsar data.", + "uid": "github/UNSW-CEEM/NEMSEER", + "url": "https://github.com/UNSW-CEEM/NEMSEER", + "rel": "/software/repository/github/UNSW-CEEM/NEMSEER", + "avatar": "https://avatars.githubusercontent.com/u/33536784?v=4", + "description": "A package for downloading and handling forecasts for the National Electricity Market (NEM) from the Australian Energy Market Operator (AEMO).", "topics": [ - "astronomy", - "astrophysics", - "fastradiobursts", - "pulsars", - "ionised-media", - "radio-astronomy" + "energy", + "python", + "aemo", + "pasa", + "forecast", + "national-electricity-market", + "nem", + "pre-dispatch", + "australia", + "nemweb" ] }, { - "uid": "github/nugent-lab/FindPOTATOS-stable", - "url": "https://github.com/nugent-lab/FindPOTATOs-stable", - "rel": "/software/repository/github/nugent-lab/FindPOTATOS-stable", - "avatar": "https://avatars.githubusercontent.com/u/51678793?v=4", + "uid": "github/maormizrachi/MadVoro", + "url": "https://github.com/maormizrachi/MadVoro", + "rel": "/software/repository/github/maormizrachi/MadVoro", + "avatar": "https://avatars.githubusercontent.com/u/85169126?v=4", "description": null, "topics": [] }, { - "uid": "github/pfaucon/PBSIM-PacBio-Simulator", - "url": "https://github.com/pfaucon/PBSIM-PacBio-Simulator", - "rel": "/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", - "avatar": "https://avatars.githubusercontent.com/u/3473919?v=4", - "description": "This is an updated mirror of the original PacBio Read Simulator", + "uid": "github/data4goodlab/wgand", + "url": "https://github.com/data4goodlab/wgand", + "rel": "/software/repository/github/data4goodlab/wgand", + "avatar": "https://avatars.githubusercontent.com/u/48566529?v=4", + "description": "Weighted graph anomalous node detection ", "topics": [] }, { - "uid": "github/federicomarulli/CosmoBolognaLib", - "url": "https://github.com/federicomarulli/CosmoBolognaLib", - "rel": "/software/repository/github/federicomarulli/CosmoBolognaLib", - "avatar": "https://avatars.githubusercontent.com/u/6041560?v=4", - "description": "free software C++ libraries for cosmological calculations", + "uid": "github/NLeSC-GO-common-infrastructure/marzipan", + "url": "https://github.com/NLeSC-GO-common-infrastructure/marzipan", + "rel": "/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", + "avatar": "https://avatars.githubusercontent.com/u/71445287?v=4", + "description": "Automated OpenNebula instantiation and provisioning (e.g SURF HPC)", "topics": [] }, { - "uid": "github/LiesaSalzer/MobilityTransformR", - "url": "https://github.com/LiesaSalzer/MobilityTransformR", - "rel": "/software/repository/github/LiesaSalzer/MobilityTransformR", - "avatar": "https://avatars.githubusercontent.com/u/61467853?v=4", - "description": "Effective mobility Transformation for CE-MS data ", + "uid": "github/sambit-giri/BCMemu", + "url": "https://github.com/sambit-giri/BCMemu", + "rel": "/software/repository/github/sambit-giri/BCMemu", + "avatar": "https://avatars.githubusercontent.com/u/16431442?v=4", + "description": null, "topics": [] }, { - "uid": "github/siminegroup/E2EDNA2", - "url": "https://github.com/siminegroup/E2EDNA2", - "rel": "/software/repository/github/siminegroup/E2EDNA2", - "avatar": "https://avatars.githubusercontent.com/u/98241471?v=4", + "uid": "github/sambit-giri/BCemu", + "url": "https://github.com/sambit-giri/BCemu", + "rel": "/software/repository/github/sambit-giri/BCemu", + "avatar": "https://avatars.githubusercontent.com/u/16431442?v=4", "description": null, "topics": [] }, { - "uid": "github/tum-pbs/PhiML", - "url": "https://github.com/tum-pbs/PhiML", - "rel": "/software/repository/github/tum-pbs/PhiML", - "avatar": "https://avatars.githubusercontent.com/u/57992617?v=4", - "description": "Intuitive scientific computing with dimension types for Jax, PyTorch, TensorFlow & NumPy", + "uid": "github/sambit-giri/tools21cm", + "url": "https://github.com/sambit-giri/tools21cm", + "rel": "/software/repository/github/sambit-giri/tools21cm", + "avatar": "https://avatars0.githubusercontent.com/u/16431442?v=4", + "description": null, "topics": [] }, { - "uid": "github/COBRAPROsimulator/COBRAPRO", - "url": "https://github.com/COBRAPROsimulator/COBRAPRO", - "rel": "/software/repository/github/COBRAPROsimulator/COBRAPRO", - "avatar": "https://avatars.githubusercontent.com/u/159205140?v=4", - "description": null, + "uid": "github/0satoken/Eclairs", + "url": "https://github.com/0satoken/Eclairs", + "rel": "/software/repository/github/0satoken/Eclairs", + "avatar": "https://avatars.githubusercontent.com/u/9446410?v=4", + "description": "Efficient Codes for the LArge scales of the unIveRSe", "topics": [] }, { - "uid": "github/complextissue/pytximport", - "url": "https://github.com/complextissue/pytximport", - "rel": "/software/repository/github/complextissue/pytximport", - "avatar": "https://avatars.githubusercontent.com/u/124284698?v=4", - "description": "Feature-rich Python implementation of the tximport package for gene count estimation.", + "uid": "github/canimus/cuallee", + "url": "https://github.com/canimus/cuallee", + "rel": "/software/repository/github/canimus/cuallee", + "avatar": "https://avatars.githubusercontent.com/u/278303?v=4", + "description": "Possibly the fastest DataFrame-agnostic quality check library in town.", "topics": [ - "python", - "rna", - "rna-seq", - "scverse", - "tximport", - "bioinformatics", - "deseq2", - "anndata" + "bigdata", + "performance-metrics", + "pyspark", + "python3", + "unit-testing", + "pydeequ", + "pandas", + "snowpark", + "dataquality", + "data-quality", + "data-quality-checks" ] }, { - "uid": "github/carlacupcake/hashin_shtrikman_mp", - "url": "https://github.com/carlacupcake/hashin_shtrikman_mp", - "rel": "/software/repository/github/carlacupcake/hashin_shtrikman_mp", - "avatar": "https://avatars.githubusercontent.com/u/13389734?v=4", - "description": null, - "topics": [] + "uid": "github/ScialdoneLab/MitoHEAR", + "url": "https://github.com/ScialdoneLab/MitoHEAR", + "rel": "/software/repository/github/ScialdoneLab/MitoHEAR", + "avatar": "https://avatars.githubusercontent.com/u/42929618?v=4", + "description": "MitoHEAR (Mitochondrial HEteroplasmy AnalyzeR) is an R package that allows the estimation as well as downstream statistical analysis of the mtDNA heteroplasmy calculated from single-cell datasets.", + "topics": [ + "bioinformatics-analysis", + "heteroplasmy", + "open-source", + "rstats-package" + ] }, { - "uid": "github/jmsdsouzaPhD/GWDALI", - "url": "https://github.com/jmsdsouzaPhD/GWDALI", - "rel": "/software/repository/github/jmsdsouzaPhD/GWDALI", - "avatar": "https://avatars.githubusercontent.com/u/70079111?v=4", - "description": "A Fisher-Based Software for Parameter Estimation from Gravitational Waves", + "uid": "github/FreBio/komics", + "url": "https://github.com/FreBio/komics", + "rel": "/software/repository/github/FreBio/komics", + "avatar": "https://avatars.githubusercontent.com/u/7162054?v=4", + "description": "Kinetoplast genOMICS", "topics": [] }, { - "uid": "github/JuliaSmoothOptimizers/DCISolver.jl", - "url": "https://github.com/JuliaSmoothOptimizers/DCISolver.jl", - "rel": "/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", - "avatar": "https://avatars.githubusercontent.com/u/15710294?v=4", - "description": null, - "topics": [] + "uid": "github/songweizhi/Binning_refiner", + "url": "https://github.com/songweizhi/Binning_refiner", + "rel": "/software/repository/github/songweizhi/Binning_refiner", + "avatar": "https://avatars.githubusercontent.com/u/11952278?v=4", + "description": "Improving genome bins through the combination of different binning programs ", + "topics": [ + "metagenomics", + "binning", + "refinement", + "binning-refiner", + "bioinformatics" + ] }, { - "uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", - "url": "https://github.com/JuliaSmoothOptimizers/PDENLPModels.jl", - "rel": "/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", - "avatar": "https://avatars.githubusercontent.com/u/15710294?v=4", - "description": "A NLPModel API for optimization problems with PDE-constraints", - "topics": [] + "uid": "github/SirSharpest/NarrowEscapeSimulator", + "url": "https://github.com/AoifeHughes/NarrowEscapeSimulator", + "rel": "/software/repository/github/SirSharpest/NarrowEscapeSimulator", + "avatar": "https://avatars.githubusercontent.com/u/10923695?v=4", + "description": "Developed during my PhD at the John Innes Centre (Norwich Research Park, Doctoral Training Programme). ", + "topics": [ + "biophysics", + "simulations", + "particle", + "python" + ] }, { - "uid": "github/MetazoaPhylogenomicsLab/FANTASIA", - "url": "https://github.com/MetazoaPhylogenomicsLab/FANTASIA", - "rel": "/software/repository/github/MetazoaPhylogenomicsLab/FANTASIA", - "avatar": "https://avatars.githubusercontent.com/u/62691665?v=4", - "description": null, + "uid": "github/exomishra/kobe", + "url": "https://github.com/exomishra/kobe", + "rel": "/software/repository/github/exomishra/kobe", + "avatar": "https://avatars.githubusercontent.com/u/40165860?v=4", + "description": "A program to add geometrical limitations and detection biases of a transit survey to theoretical planetary systems.", "topics": [] }, { - "uid": "github/cdslaborg/paramonte", - "url": "https://github.com/cdslaborg/paramonte", - "rel": "/software/repository/github/cdslaborg/paramonte", - "avatar": "https://avatars.githubusercontent.com/u/45322013?v=4", - "description": "ParaMonte: Plain Powerful Parallel Monte Carlo and MCMC Library for Python, MATLAB, Fortran, C++, C.", + "uid": "github/voutcn/megahit", + "url": "https://github.com/voutcn/megahit", + "rel": "/software/repository/github/voutcn/megahit", + "avatar": "https://avatars.githubusercontent.com/u/6329785?v=4", + "description": "Ultra-fast and memory-efficient (meta-)genome assembler", "topics": [ - "monte-carlo", - "parallel-library", - "markov-chain", - "adaptive-learning", - "bayesian-inference", - "bayesian-statistics", - "machine-learning", - "machine-learning-algorithms", - "machine-learning-library", - "sampling", - "intergration", - "c", - "cpp", - "fortran", + "bioinformatics", + "metagenomics", + "succinct", + "data-structures", + "genomics", + "genome-assembly" + ] + }, + { + "uid": "github/PRIDE-Archive/pridepy", + "url": "https://github.com/PRIDE-Archive/pridepy", + "rel": "/software/repository/github/PRIDE-Archive/pridepy", + "avatar": "https://avatars.githubusercontent.com/u/10128554?v=4", + "description": "Python client for PRIDE Archive Rest API. ", + "topics": [ + "pride-database", + "pride", "python", - "matlab", - "paramonte-library", - "monte-carlo-simulations", - "mpi", - "mcmc" + "proteomics", + "mass-spectrometry", + "python-client" ] }, { - "uid": "github/yuhuan-wu/mobilesal", - "url": "https://github.com/yuhuan-wu/MobileSal", - "rel": "/software/repository/github/yuhuan-wu/mobilesal", - "avatar": "https://avatars.githubusercontent.com/u/10758259?v=4", - "description": "[IEEE TPAMI21] MobileSal: Extremely Efficient RGB-D Salient Object Detection [PyTorch & Jittor]", + "uid": "github/tramarobin/fctSPM", + "url": "https://github.com/tramarobin/fctSnPM", + "rel": "/software/repository/github/tramarobin/fctSPM", + "avatar": "https://avatars.githubusercontent.com/u/56997117?v=4", + "description": "Using spm1d package (v.0.4.3), compute anova and post-hoc tests from anova1 to anova3rm, with a non-parametric approach (permutation tests)", "topics": [] }, { - "uid": "github/Keck-DataReductionPipelines/KcwiDRP", - "url": "https://github.com/Keck-DataReductionPipelines/KcwiDRP", - "rel": "/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", - "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", - "description": "KCWI data reduction pipeline. Developers: Don Neill, Matt Matuszewski, Chris Martin (Caltech)", + "uid": "github/icesat2py/icepyx", + "url": "https://github.com/icesat2py/icepyx", + "rel": "/software/repository/github/icesat2py/icepyx", + "avatar": "https://avatars.githubusercontent.com/u/57814535?v=4", + "description": "Python tools for obtaining and working with ICESat-2 data", "topics": [ - "kcwi", - "keck", - "drp", - "idl" + "icesat-2", + "community-driven", + "python3", + "hacktoberfest", + "closember" ] }, { - "uid": "github/Keck-DataReductionPipelines/KCWI_DRP", - "url": "https://github.com/Keck-DataReductionPipelines/KCWI_DRP", - "rel": "/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", - "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", - "description": "KCWI python DRP", + "uid": "github/jakelever/civicmine", + "url": "https://github.com/jakelever/civicmine", + "rel": "/software/repository/github/jakelever/civicmine", + "avatar": "https://avatars0.githubusercontent.com/u/3662147?v=4", + "description": "Text mining cancer biomarkers for the CIVIC database", "topics": [ - "keck", - "kcwi", - "drp", - "python" + "text-mining", + "cancer", + "bionlp", + "biomarkers", + "precision-medicine" ] }, { - "uid": "github/LCOGT/banzai", - "url": "https://github.com/LCOGT/banzai", - "rel": "/software/repository/github/LCOGT/banzai", - "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", - "description": "Beautiful Algorithms to Normalize Zillions of Astronomical Images", - "topics": [ - "backend" - ] + "uid": "github/tjlcbakx/redshift-search-graphs", + "url": "https://github.com/tjlcbakx/redshift-search-graphs", + "rel": "/software/repository/github/tjlcbakx/redshift-search-graphs", + "avatar": "https://avatars.githubusercontent.com/u/12699391?v=4", + "description": "Efficient analysis of bandwidth coverage and spectral lines for finding z-specs", + "topics": [] }, { - "uid": "github/LCOGT/neoexchange", - "url": "https://github.com/LCOGT/neoexchange", - "rel": "/software/repository/github/LCOGT/neoexchange", - "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", - "description": "NEO observing portal", + "uid": "github/pachterlab/kallisto", + "url": "https://github.com/pachterlab/kallisto", + "rel": "/software/repository/github/pachterlab/kallisto", + "avatar": "https://avatars.githubusercontent.com/u/10359946?v=4", + "description": "Near-optimal RNA-Seq quantification", "topics": [ - "backend", - "end-user", - "astronomy", - "asteroids" + "kallisto", + "rna-seq", + "pseudoalignment" ] }, { - "uid": "github/LCOGT/banzai-nres", - "url": "https://github.com/LCOGT/banzai-nres", - "rel": "/software/repository/github/LCOGT/banzai-nres", - "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", - "description": "BANZAI Data Reduction Pipeline for NRES", + "uid": "github/pachterlab/kb_python", + "url": "https://github.com/pachterlab/kb_python", + "rel": "/software/repository/github/pachterlab/kb_python", + "avatar": "https://avatars.githubusercontent.com/u/10359946?v=4", + "description": "A wrapper for the kallisto | bustools workflow for single-cell RNA-seq pre-processing", "topics": [ - "backend" + "bustools", + "kallisto", + "single-cell-rna-seq", + "rna-velocity-estimation", + "scrna-seq", + "kb-python" ] }, { - "uid": "github/twosixlabs/magicwand-datatool", - "url": "https://github.com/twosixlabs/magicwand-datatool", - "rel": "/software/repository/github/twosixlabs/magicwand-datatool", - "avatar": "https://avatars.githubusercontent.com/u/6350922?v=4", - "description": "Magicwand tool to generate tcp traffic data", + "uid": "github/Illumina/akt", + "url": "https://github.com/Illumina/akt", + "rel": "/software/repository/github/Illumina/akt", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "Ancestry and Kinship Tools", "topics": [] }, { - "uid": "github/linuxscout/pyarabic", - "url": "https://github.com/linuxscout/pyarabic", - "rel": "/software/repository/github/linuxscout/pyarabic", - "avatar": "https://avatars.githubusercontent.com/u/450792?v=4", - "description": "pyarabic", + "uid": "github/Illumina/MarViN", + "url": "https://github.com/Illumina/MarViN", + "rel": "/software/repository/github/Illumina/MarViN", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "a method for rapid genotype refinement for whole-genome sequencing data using multi-variate normal distribution. Whole-genome low-coverage sequencing has been combined with linkage-disequilibrium (LD) based genotype refinement to accurately and cost-effectively infer genotypes in large cohorts of individuals.", + "topics": [] + }, + { + "uid": "github/Illumina/manta", + "url": "https://github.com/Illumina/manta", + "rel": "/software/repository/github/Illumina/manta", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "Structural variant and indel caller for mapped sequencing data", "topics": [ - "nlp-library", - "arabic-language", - "text-processing" + "bioinformatics", + "indels", + "structural-variation", + "structural-variations" ] }, { - "uid": "github/MRCIEU/metaboprep", - "url": "https://github.com/MRCIEU/metaboprep", - "rel": "/software/repository/github/MRCIEU/metaboprep", - "avatar": "https://avatars.githubusercontent.com/u/15654827?v=4", - "description": "a pipeline of metabolomics data processing and quality control", + "uid": "github/Illumina/ExpansionHunterDenovo", + "url": "https://github.com/Illumina/ExpansionHunterDenovo", + "rel": "/software/repository/github/Illumina/ExpansionHunterDenovo", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "(EHdn) is a suite of tools for detecting novel expansions of short tandem repeats (STRs).", "topics": [] }, { - "uid": "github/MRCIEU/PHESANT", - "url": "https://github.com/MRCIEU/PHESANT", - "rel": "/software/repository/github/MRCIEU/PHESANT", - "avatar": "https://avatars.githubusercontent.com/u/15654827?v=4", - "description": "PHESANT - PHEnome Scan ANalysis Tool (pheWAS, Mendelian randomisation (MR)-pheWAS etc.) in UK Biobank", + "uid": "github/Illumina/SpliceAI", + "url": "https://github.com/Illumina/SpliceAI", + "rel": "/software/repository/github/Illumina/SpliceAI", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "A deep learning-based tool to identify splice variants", "topics": [] }, { - "uid": "github/bobleesj/cifkit", - "url": "https://github.com/bobleesj/cifkit", - "rel": "/software/repository/github/bobleesj/cifkit", - "avatar": "https://avatars.githubusercontent.com/u/14892262?v=4", - "description": "High-throughput .cif analysis made easy. Visit: https://bobleesj.github.io/cifkit/", + "uid": "github/Illumina/canvas", + "url": "https://github.com/Illumina/canvas", + "rel": "/software/repository/github/Illumina/canvas", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "a tool for calling copy number variants (CNVs) from human DNA sequencing data.", + "topics": [] + }, + { + "uid": "github/Illumina/strelka", + "url": "https://github.com/Illumina/strelka", + "rel": "/software/repository/github/Illumina/strelka", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "Strelka2 germline and somatic small variant caller", "topics": [ - "coordination-number", - "crystallography", - "high-throughput", - "site-analysis", - "solid-state" + "bioinformatics", + "snvs", + "indels", + "snps" ] }, { - "uid": "github/MFaymon/spINAR", - "url": "https://github.com/MFaymon/spINAR", - "rel": "/software/repository/github/MFaymon/spINAR", - "avatar": "https://avatars.githubusercontent.com/u/105346023?v=4", - "description": "Semiparametric and parametric estimation and bootstrapping of integer-valued autoregressive (INAR) models.", + "uid": "github/chhylp123/hifiasm", + "url": "https://github.com/chhylp123/hifiasm", + "rel": "/software/repository/github/chhylp123/hifiasm", + "avatar": "https://avatars.githubusercontent.com/u/11708053?v=4", + "description": "Hifiasm: a haplotype-resolved assembler for accurate Hifi reads ", "topics": [ - "bootstrapping", - "count-data", - "parametric-estimation", - "penalization", - "semiparametric-estimation", - "simulation", - "time-series", - "validation" + "bioinformatics", + "denovo-assembly", + "genomics", + "hifi-read", + "pacbio" ] }, { - "uid": "github/streamlit/streamlit", - "url": "https://github.com/streamlit/streamlit", - "rel": "/software/repository/github/streamlit/streamlit", - "avatar": "https://avatars.githubusercontent.com/u/45109972?v=4", - "description": "Streamlit \u2014 The fastest way to build data apps in Python", - "topics": [ - "python", - "machine-learning", - "data-science", - "deep-learning", - "data-visualization", - "streamlit", - "data-analysis", - "developer-tools" - ] + "uid": "github/lutteropp/NetRAX", + "url": "https://github.com/lutteropp/NetRAX", + "rel": "/software/repository/github/lutteropp/NetRAX", + "avatar": "https://avatars.githubusercontent.com/u/1059869?v=4", + "description": "Phylogenetic Network Inference without ILS", + "topics": [] }, { - "uid": "github/el2718/FastQSL", - "url": "https://github.com/el2718/FastQSL", - "rel": "/software/repository/github/el2718/FastQSL", - "avatar": "https://avatars.githubusercontent.com/u/45861675?v=4", - "description": null, + "uid": "github/wdecoster/chopper", + "url": "https://github.com/wdecoster/chopper", + "rel": "/software/repository/github/wdecoster/chopper", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Rust implementation of NanoFilt+NanoLyse, both originally written in Python. This tool, intended for long read sequencing such as PacBio or ONT, filters and trims a fastq file.", "topics": [] }, { - "uid": "github/datalad/datalad", - "url": "https://github.com/datalad/datalad", - "rel": "/software/repository/github/datalad/datalad", - "avatar": "https://avatars.githubusercontent.com/u/8927200?v=4", - "description": "Keep code, data, containers under control with git and git-annex", - "topics": [ - "python", - "git-annex", - "data-storage", - "dataset", - "usable" - ] + "uid": "github/wdecoster/nanolyse", + "url": "https://github.com/wdecoster/nanolyse", + "rel": "/software/repository/github/wdecoster/nanolyse", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Remove lambda phage reads from a fastq file", + "topics": [] }, { - "uid": "github/tribshms/tRIBS", - "url": "https://github.com/tribshms/tRIBS", - "rel": "/software/repository/github/tribshms/tRIBS", - "avatar": "https://avatars.githubusercontent.com/u/69878127?v=4", - "description": "TIN-based Real-time Integrated Basin Simulator (tRIBS) Distributed Hydrological Model", - "topics": [ - "hydrology", - "hydrology-modeling", - "hydrology-simulation" - ] + "uid": "github/wdecoster/nano-snakemake", + "url": "https://github.com/wdecoster/nano-snakemake", + "rel": "/software/repository/github/wdecoster/nano-snakemake", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "A snakemake pipeline for SV analysis from nanopore genome sequencing", + "topics": [] }, { - "uid": "github/azizka/IUCNN", - "url": "https://github.com/IUCNN/IUCNN", - "rel": "/software/repository/github/azizka/IUCNN", - "avatar": "https://avatars.githubusercontent.com/u/90766685?v=4", - "description": " Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of \"Not Evaluated\" or \"Data Deficient\" species, for any taxon or geographic region of interest. https://iucnn.github.io/IUCNN/", - "topics": [ - "tensorflow", - "deep-learning", - "machine-learning", - "conservation-prioritization", - "conservation" - ] + "uid": "github/wdecoster/nanomath", + "url": "https://github.com/wdecoster/nanomath", + "rel": "/software/repository/github/wdecoster/nanomath", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "A few simple math function for other Oxford Nanopore processing scripts", + "topics": [] }, { - "uid": "github/hope-data-science/tidyfst", - "url": "https://github.com/hope-data-science/tidyfst", - "rel": "/software/repository/github/hope-data-science/tidyfst", - "avatar": "https://avatars1.githubusercontent.com/u/32947502?v=4", - "description": "Tidy Verbs for Fast Data Manipulation", + "uid": "github/wdecoster/nanoQC", + "url": "https://github.com/wdecoster/nanoQC", + "rel": "/software/repository/github/wdecoster/nanoQC", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Quality control tools for nanopore sequencing data", "topics": [] }, { - "uid": "github/danielemelini/ALMA3", - "url": "https://github.com/danielemelini/ALMA3", - "rel": "/software/repository/github/danielemelini/ALMA3", - "avatar": "https://avatars.githubusercontent.com/u/3519150?v=4", - "description": "the plAnetary Love nuMbers cAlculator", + "uid": "github/wdecoster/NanoComp", + "url": "https://github.com/wdecoster/nanocomp", + "rel": "/software/repository/github/wdecoster/NanoComp", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Comparison of multiple long read datasets", "topics": [] }, { - "uid": "github/jalombar/starsmasher", - "url": "https://github.com/jalombar/starsmasher", - "rel": "/software/repository/github/jalombar/starsmasher", - "avatar": "https://avatars.githubusercontent.com/u/22803843?v=4", - "description": "A Smoothed Particle Hydrodynamics code for smashing stars (and planets)", + "uid": "github/wdecoster/NanoPlot", + "url": "https://github.com/wdecoster/NanoPlot", + "rel": "/software/repository/github/wdecoster/NanoPlot", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Plotting scripts for long read sequencing data", "topics": [] }, { - "uid": "github/scipion-em/scipion-em-continuousflex", - "url": "https://github.com/scipion-em/scipion-em-continuousflex", - "rel": "/software/repository/github/scipion-em/scipion-em-continuousflex", - "avatar": "https://avatars.githubusercontent.com/u/41120294?v=4", - "description": "Plugin for continuous conformational flexibility analysis containing HEMNMA, StructMap, HEMNMA-3D and TomoFlow for in vitro and in situ cryo-EM/ET.", + "uid": "github/wdecoster/nanofilt", + "url": "https://github.com/wdecoster/nanofilt", + "rel": "/software/repository/github/wdecoster/nanofilt", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Filtering and trimming of long read sequencing data", "topics": [] }, { - "uid": "github/Bios4Biol/intronSeeker", - "url": "https://github.com/Bios4Biol/intronSeeker", - "rel": "/software/repository/github/Bios4Biol/intronSeeker", - "avatar": "https://avatars.githubusercontent.com/u/38938508?v=4", - "description": "IntronSeeker identifies potentially retained introns in de novo RNA-seq assembly in order to quantify and remove them.", + "uid": "github/wdecoster/nanopack", + "url": "https://github.com/wdecoster/nanopack", + "rel": "/software/repository/github/wdecoster/nanopack", + "avatar": "https://avatars2.githubusercontent.com/u/11660522?v=4", + "description": "Easily install all nanopack scripts together", "topics": [] }, { - "uid": "github/vitor-de-oliveira/rheovolution", - "url": "https://github.com/vitor-de-oliveira/rheovolution", - "rel": "/software/repository/github/vitor-de-oliveira/rheovolution", - "avatar": "https://avatars.githubusercontent.com/u/52892492?v=4", - "description": "Software for numerically investigating the tidal evolution of celestial bodies", + "uid": "github/wdecoster/nanoget", + "url": "https://github.com/wdecoster/nanoget", + "rel": "/software/repository/github/wdecoster/nanoget", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Functions to extract information from Oxford Nanopore sequencing data and alignments", "topics": [] }, { - "uid": "github/Single-Cell-Graph-Learning/scSGL", - "url": "https://github.com/Single-Cell-Graph-Learning/scSGL", - "rel": "/software/repository/github/Single-Cell-Graph-Learning/scSGL", - "avatar": "https://avatars.githubusercontent.com/u/79270392?v=4", - "description": "Signed Graph Learning for single cell RNA-seq data", + "uid": "github/wdecoster/nanostat", + "url": "https://github.com/wdecoster/nanostat", + "rel": "/software/repository/github/wdecoster/nanostat", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Create statistic summary of an Oxford Nanopore read dataset", "topics": [] }, { - "uid": "github/benmontet/f3", - "url": "https://github.com/benmontet/f3", - "rel": "/software/repository/github/benmontet/f3", - "avatar": "https://avatars.githubusercontent.com/u/1314530?v=4", - "description": "Full Frame Fotometry from the Kepler Full Frame Images", + "uid": "github/wdecoster/nanocomp", + "url": "https://github.com/wdecoster/nanocomp", + "rel": "/software/repository/github/wdecoster/nanocomp", + "avatar": "https://avatars.githubusercontent.com/u/11660522?v=4", + "description": "Comparison of multiple long read datasets", "topics": [] }, { - "uid": "github/ShaunFell/GRBoondi", - "url": "https://github.com/ShaunFell/GRBoondi", - "rel": "/software/repository/github/ShaunFell/GRBoondi", - "avatar": "https://avatars.githubusercontent.com/u/37465343?v=4", - "description": "An AMR-based open source code to evolve generalized Proca fields on arbitrary fixed backgrounds", + "uid": "github/FePhyFoFum/phyx", + "url": "https://github.com/FePhyFoFum/phyx", + "rel": "/software/repository/github/FePhyFoFum/phyx", + "avatar": "https://avatars.githubusercontent.com/u/3589956?v=4", + "description": "phylogenetics tools for linux (and other mostly posix compliant) computers", "topics": [ - "general-relativity", - "numerical-relativity" + "phylogenetics", + "molecular-evolution", + "simulation" ] }, { - "uid": "github/thorstone25/qups", - "url": "https://github.com/thorstone25/qups", - "rel": "/software/repository/github/thorstone25/qups", - "avatar": "https://avatars.githubusercontent.com/u/10552188?v=4", - "description": "A MATLAB toolbox for prototyping and simulating diagnostic ultrasound imaging systems", + "uid": "github/Cloud-Drift/clouddrift", + "url": "https://github.com/Cloud-Drift/clouddrift", + "rel": "/software/repository/github/Cloud-Drift/clouddrift", + "avatar": "https://avatars.githubusercontent.com/u/91622877?v=4", + "description": "CloudDrift accelerates the use of Lagrangian data for atmospheric, oceanic, and climate sciences.", "topics": [ - "matlab", - "matlab-toolbox", - "prototyping", - "ultrasound-imaging", - "imaging", - "toolbox", - "ultrasound", - "digital-signal-processing", - "signal-processing" + "climate-data", + "climate-science", + "data-structures", + "oceanography", + "python" ] }, { - "uid": "github/pfeinsper/drone-swarm-search", - "url": "https://github.com/pfeinsper/drone-swarm-search", - "rel": "/software/repository/github/pfeinsper/drone-swarm-search", - "avatar": "https://avatars.githubusercontent.com/u/81260905?v=4", - "description": "The Drone Swarm Search project provides an environment for SAR missions built on PettingZoo, where agents, represented by drones, are tasked with locating targets identified as shipwrecked individuals.", + "uid": "github/connor-lab/vapor", + "url": "https://github.com/connor-lab/vapor", + "rel": "/software/repository/github/connor-lab/vapor", + "avatar": "https://avatars.githubusercontent.com/u/41902601?v=4", + "description": "is a tool for classification of Influenza samples from raw short read sequence data for downstream bioinformatics analysis.", + "topics": [] + }, + { + "uid": "github/r3w0p/bobocep", + "url": "https://github.com/r3w0p/bobocep", + "rel": "/software/repository/github/r3w0p/bobocep", + "avatar": "https://avatars.githubusercontent.com/u/23155844?v=4", + "description": "A fault-tolerant Complex Event Processing engine designed for edge computing in Internet of Things systems.", "topics": [ - "pettingzoo", - "rl", - "ai", - "pygame", - "python", - "multi-agent-reinforcement-learning", - "multiagent-reinforcement-learning" + "internet-of-things", + "complex-event-processing", + "edge-computing", + "fault-tolerance", + "distributed-systems" ] }, { - "uid": "github/yukiteruono/pbsim2", - "url": "https://github.com/yukiteruono/pbsim2", - "rel": "/software/repository/github/yukiteruono/pbsim2", - "avatar": "https://avatars.githubusercontent.com/u/17718124?v=4", - "description": "PBSIM2: a simulator for long read sequencers with a novel generative model of quality scores", + "uid": "github/ChristopheBerthod/Piecewise.jl", + "url": "https://github.com/ChristopheBerthod/Piecewise.jl", + "rel": "/software/repository/github/ChristopheBerthod/Piecewise.jl", + "avatar": "https://avatars.githubusercontent.com/u/36079222?v=4", + "description": null, "topics": [] }, { - "uid": "github/Cadaei-Yuvxvs/OSHy-X", - "url": "https://github.com/Cadaei-Yuvxvs/OSHy-X", - "rel": "/software/repository/github/Cadaei-Yuvxvs/OSHy-X", - "avatar": "https://avatars.githubusercontent.com/u/56923643?v=4", - "description": "Open Source Hypothalamic Atlas and Segmentation for 3T and 7T", + "uid": "github/jamesaird/FAST", + "url": "https://github.com/jamesaird/FAST", + "rel": "/software/repository/github/jamesaird/FAST", + "avatar": "https://avatars.githubusercontent.com/u/1553912?v=4", + "description": "Fitting and Assessment of Synthetic Templates - an IDL-based code that fits stellar population synthesis templates to broadband photometry and/or spectra.", "topics": [] }, { - "uid": "github/spastras/galclass", - "url": "https://github.com/spastras/galclass", - "rel": "/software/repository/github/spastras/galclass", - "avatar": "https://avatars.githubusercontent.com/u/79917367?v=4", - "description": "A python module for the morphological classification of galaxies", + "uid": "github/privong/pyMCspearman", + "url": "https://github.com/privong/pyMCSpearman", + "rel": "/software/repository/github/privong/pyMCspearman", + "avatar": "https://avatars.githubusercontent.com/u/1630295?v=4", + "description": "Monte carlo calculation of Spearman's rank correlation coefficient with uncertainties. Following Curran (2014)", + "topics": [ + "spearman-rho", + "bootstrapping-statistics", + "monte-carlo" + ] + }, + { + "uid": "github/privong/pymccorrelation", + "url": "https://github.com/privong/pymccorrelation", + "rel": "/software/repository/github/privong/pymccorrelation", + "avatar": "https://avatars.githubusercontent.com/u/1630295?v=4", + "description": "Correlation coefficients with uncertainties", + "topics": [ + "bootstrapping-statistics", + "monte-carlo", + "correlation-coefficient" + ] + }, + { + "uid": "github/lynx-x-ray-observatory/soxs", + "url": "https://github.com/lynx-x-ray-observatory/soxs", + "rel": "/software/repository/github/lynx-x-ray-observatory/soxs", + "avatar": "https://avatars.githubusercontent.com/u/47825814?v=4", + "description": "SOXS: Simulated Observations of X-ray Sources", "topics": [] }, { - "uid": "github/Illumina/ExpansionHunterDenovo", - "url": "https://github.com/Illumina/ExpansionHunterDenovo", - "rel": "/software/repository/github/Illumina/ExpansionHunterDenovo", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "(EHdn) is a suite of tools for detecting novel expansions of short tandem repeats (STRs).", + "uid": "github/lydialucchesi/Vizumap", + "url": "https://github.com/lydialucchesi/Vizumap", + "rel": "/software/repository/github/lydialucchesi/Vizumap", + "avatar": "https://avatars.githubusercontent.com/u/20309551?v=4", + "description": "R package for visualizing uncertainty in spatial data", "topics": [] }, { - "uid": "github/Illumina/SpliceAI", - "url": "https://github.com/Illumina/SpliceAI", - "rel": "/software/repository/github/Illumina/SpliceAI", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "A deep learning-based tool to identify splice variants", + "uid": "github/fizban007/Aperture4", + "url": "https://github.com/fizban007/Aperture4", + "rel": "/software/repository/github/fizban007/Aperture4", + "avatar": "https://avatars.githubusercontent.com/u/4934996?v=4", + "description": null, "topics": [] }, { - "uid": "github/Illumina/akt", - "url": "https://github.com/Illumina/akt", - "rel": "/software/repository/github/Illumina/akt", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "Ancestry and Kinship Tools", + "uid": "github/morriscb/The-wiZZ", + "url": "https://github.com/morriscb/the-wizz", + "rel": "/software/repository/github/morriscb/The-wiZZ", + "avatar": "https://avatars.githubusercontent.com/u/3270927?v=4", + "description": "A clustering redshift estimation code for us folks. For information on the method see Schmidt et al. 2013, Menard et al. 2013, and Rahman et al. 2015, 2016b. Details on this implementation can be found in Morrison et al. 2017", "topics": [] }, { - "uid": "github/Illumina/manta", - "url": "https://github.com/Illumina/manta", - "rel": "/software/repository/github/Illumina/manta", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "Structural variant and indel caller for mapped sequencing data", + "uid": "github/husseinaluie/FlowSieve", + "url": "https://github.com/husseinaluie/FlowSieve", + "rel": "/software/repository/github/husseinaluie/FlowSieve", + "avatar": "https://avatars.githubusercontent.com/u/16828501?v=4", + "description": "FlowSieve coarse-graining code base", + "topics": [] + }, + { + "uid": "github/stan-dev/stan", + "url": "https://github.com/stan-dev/stan", + "rel": "/software/repository/github/stan-dev/stan", + "avatar": "https://avatars2.githubusercontent.com/u/3374820?v=4", + "description": "Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details. ", "topics": [ - "bioinformatics", - "indels", - "structural-variation", - "structural-variations" + "stan", + "bayesian-inference", + "bayesian", + "bayesian-methods", + "bayesian-statistics", + "bayesian-data-analysis" ] }, { - "uid": "github/Illumina/canvas", - "url": "https://github.com/Illumina/canvas", - "rel": "/software/repository/github/Illumina/canvas", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "a tool for calling copy number variants (CNVs) from human DNA sequencing data.", + "uid": "github/danielemelini/ALMA3", + "url": "https://github.com/danielemelini/ALMA3", + "rel": "/software/repository/github/danielemelini/ALMA3", + "avatar": "https://avatars.githubusercontent.com/u/3519150?v=4", + "description": "the plAnetary Love nuMbers cAlculator", "topics": [] }, { - "uid": "github/Illumina/MarViN", - "url": "https://github.com/Illumina/MarViN", - "rel": "/software/repository/github/Illumina/MarViN", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "a method for rapid genotype refinement for whole-genome sequencing data using multi-variate normal distribution. Whole-genome low-coverage sequencing has been combined with linkage-disequilibrium (LD) based genotype refinement to accurately and cost-effectively infer genotypes in large cohorts of individuals.", + "uid": "github/telatin/bamtocov", + "url": "https://github.com/telatin/bamtocov", + "rel": "/software/repository/github/telatin/bamtocov", + "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", + "description": "\ud83c\udfd4 coverage extraction from BAM/CRAM files, supporting targets \ud83d\udcca \u00a0", + "topics": [ + "bioinformatics", + "bam", + "coverage", + "alignment", + "gff", + "bed", + "ngs" + ] + }, + { + "uid": "github/telatin/covtobed", + "url": "https://github.com/telatin/covtobed", + "rel": "/software/repository/github/telatin/covtobed", + "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", + "description": "\u26f0 covtobed | Convert the coverage track from a BAM file into a BED file", + "topics": [ + "bioinformatics", + "bioinformatics-tool", + "bioconda", + "bed", + "alignments", + "bam-files", + "sequence-coverage" + ] + }, + { + "uid": "github/telatin/qax", + "url": "https://github.com/telatin/qax", + "rel": "/software/repository/github/telatin/qax", + "avatar": "https://avatars0.githubusercontent.com/u/15690844?v=4", + "description": "Qiime2 Artifact eXtractor", "topics": [] }, { - "uid": "github/Illumina/strelka", - "url": "https://github.com/Illumina/strelka", - "rel": "/software/repository/github/Illumina/strelka", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "Strelka2 germline and somatic small variant caller", + "uid": "github/telatin/seqfu2", + "url": "https://github.com/telatin/seqfu2", + "rel": "/software/repository/github/telatin/seqfu2", + "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", + "description": ":rocket: seqfu - Sequece Fastx Utilities", "topics": [ + "fastq", + "fasta", "bioinformatics", - "snvs", - "indels", - "snps" + "bioinformatics-tool", + "bioconda", + "genomics", + "ngs", + "sequencing" ] }, { - "uid": "github/neurogeriatricskiel/NGMT", - "url": "https://github.com/neurogeriatricskiel/KielMAT", - "rel": "/software/repository/github/neurogeriatricskiel/NGMT", - "avatar": "https://avatars.githubusercontent.com/u/63721960?v=4", - "description": "Python based toolbox for processing motion data", + "uid": "github/mrazomej/AutoEncoderToolkit.jl", + "url": "https://github.com/mrazomej/AutoEncoderToolkit.jl", + "rel": "/software/repository/github/mrazomej/AutoEncoderToolkit.jl", + "avatar": "https://avatars.githubusercontent.com/u/8460891?v=4", + "description": "Julia package with several functions to train and analyze Autoencoder-based neural networks", "topics": [] }, { - "uid": "github/ADThomas-astro/oxaf", - "url": "https://github.com/ADThomas-astro/oxaf", - "rel": "/software/repository/github/ADThomas-astro/oxaf", - "avatar": "https://avatars.githubusercontent.com/u/20833207?v=4", + "uid": "github/DotBots/qrkey", + "url": "https://github.com/DotBots/qrkey", + "rel": "/software/repository/github/DotBots/qrkey", + "avatar": "https://avatars.githubusercontent.com/u/80765534?v=4", + "description": "Simply and Securely Control Robots Swarms", + "topics": [] + }, + { + "uid": "github/RafaelSdeSouza/capivara", + "url": "https://github.com/RafaelSdeSouza/capivara", + "rel": "/software/repository/github/RafaelSdeSouza/capivara", + "avatar": "https://avatars.githubusercontent.com/u/3153856?v=4", "description": null, "topics": [] }, { - "uid": "github/Open-Minds-Lab/MRdataset", - "url": "https://github.com/Open-Minds-Lab/MRdataset", - "rel": "/software/repository/github/Open-Minds-Lab/MRdataset", - "avatar": "https://avatars.githubusercontent.com/u/71519641?v=4", - "description": "MRdataset : unified interface to various neuroimaging dataset formats", + "uid": "github/RafaelSdeSouza/qrpca", + "url": "https://github.com/RafaelSdeSouza/qrpca", + "rel": "/software/repository/github/RafaelSdeSouza/qrpca", + "avatar": "https://avatars.githubusercontent.com/u/3153856?v=4", + "description": "QR based Principal Components Analysis", "topics": [ - "neuroimaging", - "mri", - "neuroscience", - "quality-control", - "niqc" + "pca", + "r", + "dimensionality-reduction" ] }, { - "uid": "github/Jane110111107/IsoTree", - "url": null, - "rel": "/software/repository/github/Jane110111107/IsoTree", - "avatar": "", - "description": "an efficient de novo trascriptome assembler for RNA-Seq data. It can assemble transcripts from RNA-Seq reads (in fasta format). Unlike most of de novo assembly methods that build de Bruijn graph or splicing graph by connecting k-mers which are sets of overlapping substrings generated from reads, IsoTree constructs splicing graph by connecting reads directly. For each splicing graph, IsoTree applies an iterative scheme of \u2026", + "uid": "github/AgentOxygen/HDP", + "url": "https://github.com/AgentOxygen/HDP", + "rel": "/software/repository/github/AgentOxygen/HDP", + "avatar": "https://avatars.githubusercontent.com/u/13355009?v=4", + "description": "Heatwave Diagnostics Package (HDP) for efficiently quantifying multiple heatwave metrics from GCM output across large parameters spaces.", + "topics": [] + }, + { + "uid": "github/Valcin/BE_HaPPy", + "url": "https://github.com/Valcin/BE_HaPPy", + "rel": "/software/repository/github/Valcin/BE_HaPPy", + "avatar": "https://avatars.githubusercontent.com/u/40492877?v=4", + "description": "Bias Emulator for Halo Power Spectrum ", + "topics": [] + }, + { + "uid": "github/YihePang/DisoFLAG", + "url": "https://github.com/YihePang/DisoFLAG", + "rel": "/software/repository/github/YihePang/DisoFLAG", + "avatar": "https://avatars.githubusercontent.com/u/38775429?v=4", + "description": "Accurate prediction of protein intrinsic disorder and its functions using graph-based interaction protein language model", "topics": [] }, { - "uid": "github/maayane/catsHTM", - "url": "https://github.com/maayane/catsHTM", - "rel": "/software/repository/github/maayane/catsHTM", - "avatar": "https://avatars.githubusercontent.com/u/9591631?v=4", - "description": "A tool for fast accessing and cross-matching large astronomical catalogs", + "uid": "github/DS4Ag/dpest", + "url": "https://github.com/DS4Ag/dpest", + "rel": "/software/repository/github/DS4Ag/dpest", + "avatar": "https://avatars.githubusercontent.com/u/11559844?v=4", + "description": "Python package automating PEST file creation for DSSAT crop model calibration. Generates template files for Cultivar and Ecotype parameters, instruction files for OVERVIEW.OUT and PlantGro.OUT, and the main PEST control file. Includes utility to extend PlantGro.OUT files for complete time series compatibility.", "topics": [] }, { - "uid": "github/drupke/questfit", - "url": "https://github.com/drupke/questfit", - "rel": "/software/repository/github/drupke/questfit", - "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", - "description": "fitter for mid-infrared galaxy spectra", + "uid": "github/smoh/kinesis", + "url": "https://github.com/smoh/kinesis", + "rel": "/software/repository/github/smoh/kinesis", + "avatar": "https://avatars.githubusercontent.com/u/1384435?v=4", + "description": "kinematic modelling of clusters with gaia", "topics": [] }, { - "uid": "github/drupke/ifsred", - "url": "https://github.com/drupke/ifsred", - "rel": "/software/repository/github/drupke/ifsred", - "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", - "description": "Astronomy software tools for reducing data from an integral field spectrograph (IFS).", + "uid": "github/tribshms/tRIBS", + "url": "https://github.com/tribshms/tRIBS", + "rel": "/software/repository/github/tribshms/tRIBS", + "avatar": "https://avatars.githubusercontent.com/u/69878127?v=4", + "description": "TIN-based Real-time Integrated Basin Simulator (tRIBS) Distributed Hydrological Model", + "topics": [ + "hydrology", + "hydrology-modeling", + "hydrology-simulation" + ] + }, + { + "uid": "github/cwru-pat/cmb-multipole_vectors", + "url": "https://github.com/cwru-pat/cmb-multipole_vectors", + "rel": "/software/repository/github/cwru-pat/cmb-multipole_vectors", + "avatar": "https://avatars.githubusercontent.com/u/10934368?v=4", + "description": "Multipole Vector formalism", "topics": [] }, { - "uid": "github/drupke/ifsfit", - "url": "https://github.com/drupke/ifsfit", - "rel": "/software/repository/github/drupke/ifsfit", - "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", - "description": "Astronomy spectral fitting software optimized for integral field spectroscopy (IFS).", + "uid": "github/cwru-pat/cosmograph", + "url": "https://github.com/cwru-pat/cosmograph", + "rel": "/software/repository/github/cwru-pat/cosmograph", + "avatar": "https://avatars.githubusercontent.com/u/10934368?v=4", + "description": "COSMOlogical General Relativity And (Perfect fluid | Particle) Hydrodynamics", "topics": [] }, { - "uid": "github/cjneely10/EukMetaSanity", - "url": "https://github.com/cjneely10/EukMetaSanity", - "rel": "/software/repository/github/cjneely10/EukMetaSanity", - "avatar": "https://avatars.githubusercontent.com/u/31027651?v=4", - "description": "Structural and functional annotation of eukaryotic metagenome-assembled genomes", + "uid": "github/bjmorgan/py-sc-fermi", + "url": "https://github.com/bjmorgan/py-sc-fermi", + "rel": "/software/repository/github/bjmorgan/py-sc-fermi", + "avatar": "https://avatars.githubusercontent.com/u/1182923?v=4", + "description": "py-sc-fermi is a materials modelling code for calculating self-consistent Fermi energies and defect concentrations under thermodynamic equilibrium (or quasi-equilibrium) given defect formation energies.", "topics": [] }, { - "uid": "github/asmusskar/ALVA", - "url": "https://github.com/asmusskar/ALVA", - "rel": "/software/repository/github/asmusskar/ALVA", - "avatar": "https://avatars2.githubusercontent.com/u/46743643?v=4", - "description": "ALVA is a MATLAB-package for advanced pavement modeling that is highly adaptive", + "uid": "github/pipliggins/EVolve", + "url": "https://github.com/pipliggins/EVolve", + "rel": "/software/repository/github/pipliggins/EVolve", + "avatar": "https://avatars.githubusercontent.com/u/55396775?v=4", + "description": "An atmospheric growth and evolution model based on the EVo degassing model and FastChem 2.0", "topics": [] }, { - "uid": "github/huangnengCSU/compleasm", - "url": "https://github.com/huangnengCSU/compleasm", - "rel": "/software/repository/github/huangnengCSU/compleasm", - "avatar": "https://avatars.githubusercontent.com/u/28866823?v=4", - "description": "A genome completeness evaluation tool based on miniprot", + "uid": "github/EcoJulia/EcologicalNetworks.jl", + "url": "https://github.com/EcoJulia/EcologicalNetworks.jl", + "rel": "/software/repository/github/EcoJulia/EcologicalNetworks.jl", + "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", + "description": "Everything you've never dreamed about measuring on ecological networks.", "topics": [ - "bioinformatics" + "julia", + "ecology", + "networks" ] }, { - "uid": "github/lijing28101/maize_pyrpipe", - "url": "https://github.com/lijing28101/maize_pyrpipe", - "rel": "/software/repository/github/lijing28101/maize_pyrpipe", - "avatar": "https://avatars.githubusercontent.com/u/22349573?v=4", - "description": null, + "uid": "github/EcoJulia/SimpleSDMLayers.jl", + "url": "https://github.com/EcoJulia/SimpleSDMLayers.jl", + "rel": "/software/repository/github/EcoJulia/SimpleSDMLayers.jl", + "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", + "description": "Simple layers for species distribution modeling and bioclimatic data", "topics": [] }, { - "uid": "github/ymocquar/HOODESolver.jl", - "url": "https://github.com/ymocquar/HOODESolver.jl", - "rel": "/software/repository/github/ymocquar/HOODESolver.jl", - "avatar": "https://avatars.githubusercontent.com/u/22094571?v=4", - "description": "High Oscillatory Ordinary Differential Equation Solver (write in Julia language)", + "uid": "github/EcoJulia/Microbiome.jl", + "url": "https://github.com/EcoJulia/Microbiome.jl", + "rel": "/software/repository/github/EcoJulia/Microbiome.jl", + "avatar": "https://avatars.githubusercontent.com/u/22506369?v=4", + "description": "For analysis of microbiome and microbial community data", "topics": [ - "julia", - "high-oscillatory", - "fft", - "ode-solver", - "adams-bashforth-methods" + "microbiome", + "julia-language", + "ecology", + "biology" ] }, { - "uid": "github/dfm/corner.py", - "url": "https://github.com/dfm/corner.py", - "rel": "/software/repository/github/dfm/corner.py", - "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", - "description": "Make some beautiful corner plots", + "uid": "github/arshajii/ema", + "url": "https://github.com/arshajii/ema", + "rel": "/software/repository/github/arshajii/ema", + "avatar": "https://avatars.githubusercontent.com/u/2407176?v=4", + "description": "Fast & accurate alignment of barcoded short-reads", "topics": [ - "python", - "plotting", - "data-analysis", - "data-visualization" + "bioinformatics", + "sequence-alignment" ] }, { - "uid": "github/dfm/ketu", - "url": "https://github.com/dfm/ketu", - "rel": "/software/repository/github/dfm/ketu", - "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", - "description": "I can haz planetz?", - "topics": [] - }, - { - "uid": "github/dfm/photodynam", - "url": "https://github.com/dfm/photodynam", - "rel": "/software/repository/github/dfm/photodynam", - "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", - "description": "Photodynamical code for fitting the light curves of multiple body systems written by Josh Carter", + "uid": "github/csbioinfopk/iSumoK-PseAAC", + "url": "https://github.com/csbioinfopk/iSumoK-PseAAC", + "rel": "/software/repository/github/csbioinfopk/iSumoK-PseAAC", + "avatar": "https://avatars.githubusercontent.com/u/53048263?v=4", + "description": "This is a GitHub repository page that is maintained by Bioinformatics Lab at the Department of Computer Science, University of Management and Technology, Lahore, Pakistan.", "topics": [] }, { - "uid": "github/dfm/exopop", - "url": "https://github.com/dfm/exopop", - "rel": "/software/repository/github/dfm/exopop", - "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", - "description": "Inferring the population of exoplanets", + "uid": "github/maayane/catsHTM", + "url": "https://github.com/maayane/catsHTM", + "rel": "/software/repository/github/maayane/catsHTM", + "avatar": "https://avatars.githubusercontent.com/u/9591631?v=4", + "description": "A tool for fast accessing and cross-matching large astronomical catalogs", "topics": [] }, { - "uid": "github/dfm/celerite", - "url": "https://github.com/dfm/celerite", - "rel": "/software/repository/github/dfm/celerite", - "avatar": "https://avatars.githubusercontent.com/u/350282?v=4", - "description": "Scalable 1D Gaussian Processes in C++, Python, and Julia", + "uid": "github/HAWinther/MG-PICOLA-PUBLIC", + "url": "https://github.com/HAWinther/MG-PICOLA-PUBLIC", + "rel": "/software/repository/github/HAWinther/MG-PICOLA-PUBLIC", + "avatar": "https://avatars.githubusercontent.com/u/10915858?v=4", + "description": "This is a modified version of the L-PICOLA code extending the COLA approach for simulating cosmological structure formation to theories that exhibit scale-dependent growth. It can compute matter power-spectra (CDM and total), redshift-space multipole power-spectra P0,P2,P4 and do halofinding on the fly. It can also include the effects of massive neutrinos on structure formation.", "topics": [ - "python", - "gaussian-processes", - "astronomy", - "time-series", - "stars", - "exoplanets", - "julia", - "cpp", - "c-plus-plus" + "n-body", + "n-body-simulator", + "lcdm", + "cola", + "cosmology", + "power-spectrum", + "growth-factor" ] }, { - "uid": "github/N-BodyShop/smooth", - "url": "https://github.com/N-BodyShop/smooth", - "rel": "/software/repository/github/N-BodyShop/smooth", - "avatar": "https://avatars.githubusercontent.com/u/6473052?v=4", - "description": "A Smoothing Program for N-body Simulations", + "uid": "github/HAWinther/FML", + "url": "https://github.com/HAWinther/FML", + "rel": "/software/repository/github/HAWinther/FML", + "avatar": "https://avatars.githubusercontent.com/u/10915858?v=4", + "description": "A C++ library for working with particles and grids in a parallel setting.", "topics": [] }, { - "uid": "github/N-BodyShop/fof", - "url": "https://github.com/N-BodyShop/fof", - "rel": "/software/repository/github/N-BodyShop/fof", - "avatar": "https://avatars.githubusercontent.com/u/6473052?v=4", - "description": "Friends of Friends halo finder", + "uid": "github/jstuecker/adiabatic-tides", + "url": "https://github.com/jstuecker/adiabatic-tides", + "rel": "/software/repository/github/jstuecker/adiabatic-tides", + "avatar": "https://avatars.githubusercontent.com/u/17026809?v=4", + "description": "Code for evaluating the tidal stripping of dark matter (sub)haloes in the adiabatic limit", "topics": [] }, { - "uid": "github/marver17/DICOMSEG_Converter", - "url": "https://github.com/marver17/DICOMSEG_Converter", - "rel": "/software/repository/github/marver17/DICOMSEG_Converter", - "avatar": "https://avatars.githubusercontent.com/u/55630091?v=4", - "description": "Nifti and rtstruct converter in dicomseg making for EUCAIM project", + "uid": "github/gt1/bambamc", + "url": "https://github.com/gt1/bambamc", + "rel": "/software/repository/github/gt1/bambamc", + "avatar": "https://avatars.githubusercontent.com/u/3490790?v=4", + "description": "lightweight C implementation of name collating BAM file input and BAM file output ", "topics": [] }, { - "uid": "github/CederGroupHub/smol", - "url": "https://github.com/CederGroupHub/smol", - "rel": "/software/repository/github/CederGroupHub/smol", - "avatar": "https://avatars.githubusercontent.com/u/34322218?v=4", - "description": "Statistical Mechanics on Lattices", + "uid": "github/sjvrijn/mf2", + "url": "https://github.com/sjvrijn/mf2", + "rel": "/software/repository/github/sjvrijn/mf2", + "avatar": "https://avatars2.githubusercontent.com/u/8833517?v=4", + "description": "Collection of Multi-Fidelity benchmark functions", "topics": [ - "cluster-expansion", - "materials-science", - "monte-carlo", - "statistical-mechanics" + "multi-fidelity", + "benchmark-functions", + "benchmark-suite", + "benchmarking-suite", + "python" ] }, { - "uid": "github/CederGroupHub/sparse-lm", - "url": "https://github.com/CederGroupHub/sparse-lm", - "rel": "/software/repository/github/CederGroupHub/sparse-lm", - "avatar": "https://avatars.githubusercontent.com/u/34322218?v=4", - "description": "Sparse Linear Regression Models", + "uid": "github/Qiskit-Extensions/qiskit-dynamics", + "url": "https://github.com/Qiskit-Extensions/qiskit-dynamics", + "rel": "/software/repository/github/Qiskit-Extensions/qiskit-dynamics", + "avatar": "https://avatars.githubusercontent.com/u/91233108?v=4", + "description": "Tools for building and solving models of quantum systems in Qiskit", "topics": [] }, { - "uid": "github/skyfielders/python-skyfield", - "url": "https://github.com/skyfielders/python-skyfield", - "rel": "/software/repository/github/skyfielders/python-skyfield", - "avatar": "https://avatars.githubusercontent.com/u/11967071?v=4", - "description": "Elegant astronomy for Python", + "uid": "github/SJ001/AI-Feynman", + "url": "https://github.com/SJ001/AI-Feynman", + "rel": "/software/repository/github/SJ001/AI-Feynman", + "avatar": "https://avatars.githubusercontent.com/u/10308578?v=4", + "description": null, "topics": [] }, { - "uid": "github/bcjaeger/aorsf", - "url": "https://github.com/ropensci/aorsf", - "rel": "/software/repository/github/bcjaeger/aorsf", - "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", - "description": "Accelerated Oblique Random Survival Forests", - "topics": [ - "rstats", - "data-science", - "oblique", - "random-forest", - "survival" - ] + "uid": "github/NIFTI-Imaging/nifti_clib", + "url": "https://github.com/NIFTI-Imaging/nifti_clib", + "rel": "/software/repository/github/NIFTI-Imaging/nifti_clib", + "avatar": "https://avatars.githubusercontent.com/u/45666806?v=4", + "description": "C libraries for NIFTI support", + "topics": [] }, { - "uid": "github/UcarLab/AMULET", - "url": "https://github.com/UcarLab/AMULET", - "rel": "/software/repository/github/UcarLab/AMULET", - "avatar": "https://avatars.githubusercontent.com/u/16825298?v=4", - "description": "A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.", + "uid": "github/valentingar/confluxpro", + "url": "https://github.com/valentingar/ConFluxPro", + "rel": "/software/repository/github/valentingar/confluxpro", + "avatar": "https://avatars.githubusercontent.com/u/74970146?v=4", + "description": "A toolkit for soil gas analysis", "topics": [] }, { - "uid": "github/feature-engine/feature_engine", - "url": "https://github.com/feature-engine/feature_engine", - "rel": "/software/repository/github/feature-engine/feature_engine", - "avatar": "https://avatars.githubusercontent.com/u/87381597?v=4", - "description": "Feature engineering package with sklearn like functionality", + "uid": "github/ants-project/ANTs", + "url": "https://github.com/ants-project/ANTs", + "rel": "/software/repository/github/ants-project/ANTs", + "avatar": "https://avatars.githubusercontent.com/u/54352578?v=4", + "description": null, "topics": [] }, { - "uid": "github/SERVIR/servir-aces", - "url": "https://github.com/SERVIR/servir-aces", - "rel": "/software/repository/github/SERVIR/servir-aces", - "avatar": "https://avatars.githubusercontent.com/u/8176548?v=4", - "description": "Agricultural Classification and Estimation Service", + "uid": "github/anuradhawick/LRBinner", + "url": "https://github.com/anuradhawick/LRBinner", + "rel": "/software/repository/github/anuradhawick/LRBinner", + "avatar": "https://avatars.githubusercontent.com/u/9621844?v=4", + "description": "LRBinner is a long-read binning tool published in WABI 2021 proceedings and AMB.", "topics": [ - "agriculture", - "mapping", - "remote-sensing" + "bioinformatics", + "metagenomics", + "metagenomic-analysis", + "metagenomics-binning", + "python", + "pacbio", + "nanopore-sequencing" ] }, { - "uid": "github/rdpstaff/AlignmentTools", - "url": "https://github.com/rdpstaff/AlignmentTools", - "rel": "/software/repository/github/rdpstaff/AlignmentTools", - "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", - "description": "Tools for pairwise sequence comparison, distance calculation, and hidden markov model sequence scoring (using HMMER3 models). Many RDP Projects require this package.", + "uid": "github/iomega/zenodo-upload", + "url": "https://github.com/iomega/zenodo-upload", + "rel": "/software/repository/github/iomega/zenodo-upload", + "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", + "description": "JS package to create a new version of a Zenodo upload with a file", "topics": [] }, { - "uid": "github/rdpstaff/classifier", - "url": "https://github.com/rdpstaff/classifier", - "rel": "/software/repository/github/rdpstaff/classifier", - "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", - "description": "RDP extensible sequence classifier for fungal lsu, bacterial and archaeal 16s", + "uid": "github/iomega/spec2vec_gnps_data_analysis", + "url": "https://github.com/iomega/spec2vec_gnps_data_analysis", + "rel": "/software/repository/github/iomega/spec2vec_gnps_data_analysis", + "avatar": "https://avatars.githubusercontent.com/u/39822447?v=4", + "description": "Analysis and benchmarking of mass spectra similarity measures using gnps data set.", "topics": [] }, { - "uid": "github/rdpstaff/ReadSeq", - "url": "https://github.com/rdpstaff/ReadSeq", - "rel": "/software/repository/github/rdpstaff/ReadSeq", - "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", - "description": "Java based common sequence file format reader and sequence file manipulation. Most RDP projects require this package.", + "uid": "github/iomega/spec2vec", + "url": "https://github.com/iomega/spec2vec", + "rel": "/software/repository/github/iomega/spec2vec", + "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", + "description": "Word2Vec based similarity measure of mass spectrometry data.", + "topics": [ + "word2vec", + "mass-spectrometry", + "fuzzy-matching", + "fuzzy-search" + ] + }, + { + "uid": "github/iomega/paired-data-form", + "url": "https://github.com/iomega/paired-data-form", + "rel": "/software/repository/github/iomega/paired-data-form", + "avatar": "https://avatars3.githubusercontent.com/u/39822447?v=4", + "description": "Linking mas spectra and genomic information to discover new chemistry", "topics": [] }, { - "uid": "github/rdpstaff/TaxonomyTree", - "url": "https://github.com/rdpstaff/TaxonomyTree", - "rel": "/software/repository/github/rdpstaff/TaxonomyTree", - "avatar": "https://avatars.githubusercontent.com/u/2041409?v=4", - "description": "TaxonomyTree building and traversal utility classes.", + "uid": "github/minterpy-project/minterpy", + "url": "https://github.com/minterpy-project/minterpy", + "rel": "/software/repository/github/minterpy-project/minterpy", + "avatar": "https://avatars.githubusercontent.com/u/127753488?v=4", + "description": "Multivariate polynomial interpolation in Python", "topics": [] }, { - "uid": "github/igrins/plp", - "url": "https://github.com/igrins/plp", - "rel": "/software/repository/github/igrins/plp", - "avatar": "https://avatars.githubusercontent.com/u/7800768?v=4", - "description": "IGRINS pipeline package v3", + "uid": "github/thomasorb/orcs", + "url": "https://github.com/thomasorb/orcs", + "rel": "/software/repository/github/thomasorb/orcs", + "avatar": "https://avatars.githubusercontent.com/u/30360191?v=4", + "description": "ORCS is an analysis engine for SITELLE spectral cubes.", "topics": [] }, { - "uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", - "url": "https://github.com/FSEC-Photovoltaics/pvrpm-lcoe", - "rel": "/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", - "avatar": "https://avatars.githubusercontent.com/u/72280691?v=4", - "description": "PV Simulation using SAM and Python", + "uid": "github/thomasorb/orbs", + "url": "https://github.com/thomasorb/orbs", + "rel": "/software/repository/github/thomasorb/orbs", + "avatar": "https://avatars.githubusercontent.com/u/30360191?v=4", + "description": "ORBS is the data reduction pipeline for SITELLE", "topics": [] }, { - "uid": "github/mzytnicki/srnaMapper", - "url": "https://github.com/mzytnicki/srnaMapper", - "rel": "/software/repository/github/mzytnicki/srnaMapper", - "avatar": "https://avatars.githubusercontent.com/u/34034101?v=4", - "description": "Mapping small RNA data to a genome.", + "uid": "github/BiocomputeLab/paraSBOLv", + "url": "https://github.com/BiocomputeLab/paraSBOLv", + "rel": "/software/repository/github/BiocomputeLab/paraSBOLv", + "avatar": "https://avatars.githubusercontent.com/u/13359083?v=4", + "description": "A lightweight Python library designed to simplify the development of tools that render SBOL Visual diagrams.", + "topics": [ + "sbol", + "synbio", + "biodesign", + "sbolv", + "svg", + "sbol-visual" + ] + }, + { + "uid": "github/CSUBioGroup/GraphLncLoc", + "url": "https://github.com/CSUBioGroup/GraphLncLoc", + "rel": "/software/repository/github/CSUBioGroup/GraphLncLoc", + "avatar": "https://avatars.githubusercontent.com/u/52996140?v=4", + "description": null, "topics": [] }, { - "uid": "github/gromacs/gromacs", - "url": "https://github.com/gromacs/gromacs", - "rel": "/software/repository/github/gromacs/gromacs", - "avatar": "https://avatars.githubusercontent.com/u/92540?v=4", - "description": "Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/gromacs/gromacs for code review and issue tracking.", + "uid": "github/imcgreer/simqso", + "url": "https://github.com/imcgreer/simqso", + "rel": "/software/repository/github/imcgreer/simqso", + "avatar": "https://avatars.githubusercontent.com/u/9142924?v=4", + "description": "Module for generating simulated quasar spectra", "topics": [] }, { - "uid": "github/brainets/frites", - "url": "https://github.com/brainets/frites", - "rel": "/software/repository/github/brainets/frites", - "avatar": "https://avatars.githubusercontent.com/u/47176497?v=4", - "description": "Framework for Information Theoretical analysis of Electrophysiological data and Statistics", + "uid": "github/aiproteomics/aiproteomics", + "url": "https://github.com/aiproteomics/aiproteomics", + "rel": "/software/repository/github/aiproteomics/aiproteomics", + "avatar": "https://avatars.githubusercontent.com/u/89943033?v=4", + "description": "A package for MSMS spectral library prediction models from the field of (phospho-)proteomics, intended to facilitate the testing and comparison of different neural network architectures and existing models.", "topics": [ - "information-theory", - "electrophysiological-data", - "statistics", - "group-level", - "rfx", - "ffx", - "gaussian-copula", - "cluster-based", - "neurophysiological-data", - "functional-connectivity", - "brainweb" + "msms", + "mass-spectrometry", + "deep-learning", + "spectral-library" ] }, { - "uid": "github/reizio/reiz.io", - "url": "https://github.com/reizio/reiz.io", - "rel": "/software/repository/github/reizio/reiz.io", - "avatar": "https://avatars.githubusercontent.com/u/71179352?v=4", - "description": "Structural Source Code Search Engine", + "uid": "github/Stuermer/EchelleSimulator", + "url": "https://github.com/Stuermer/EchelleSimulator", + "rel": "/software/repository/github/Stuermer/EchelleSimulator", + "avatar": "https://avatars.githubusercontent.com/u/6728233?v=4", + "description": null, "topics": [ - "source", - "source-code", - "search-engine", - "python-ast", - "ast-matcher" + "spectrograph", + "zemax", + "echelle-simulation" ] }, { - "uid": "github/dartoon/galight", - "url": "https://github.com/dartoon/galight", - "rel": "/software/repository/github/dartoon/galight", - "avatar": "https://avatars.githubusercontent.com/u/12727027?v=4", - "description": "A python package that decompose the light into PSF and Sersic, fitting based on lenstronomy", + "uid": "github/RaRe-Technologies/gensim", + "url": "https://github.com/RaRe-Technologies/gensim", + "rel": "/software/repository/github/RaRe-Technologies/gensim", + "avatar": "https://avatars3.githubusercontent.com/u/12515886?v=4", + "description": "Topic Modelling for Humans", + "topics": [ + "gensim", + "topic-modeling", + "information-retrieval", + "machine-learning", + "natural-language-processing", + "nlp", + "data-science", + "python", + "data-mining", + "word2vec", + "word-embeddings", + "neural-network", + "document-similarity", + "word-similarity", + "fasttext" + ] + }, + { + "uid": "github/Natsiopoulos/ARDL", + "url": "https://github.com/Natsiopoulos/ARDL", + "rel": "/software/repository/github/Natsiopoulos/ARDL", + "avatar": "https://avatars.githubusercontent.com/u/38705190?v=4", + "description": "ARDL, ECM and Bounds-Test for Cointegration", + "topics": [] + }, + { + "uid": "github/morphometry/papaya2", + "url": "https://github.com/morphometry/papaya2", + "rel": "/software/repository/github/morphometry/papaya2", + "avatar": "https://avatars1.githubusercontent.com/u/48016973?v=4", + "description": "compute 2D irreducible Minkowski tensors", + "topics": [] + }, + { + "uid": "github/msalibian/RBF", + "url": "https://github.com/msalibian/RBF", + "rel": "/software/repository/github/msalibian/RBF", + "avatar": "https://avatars.githubusercontent.com/u/5422467?v=4", + "description": "A Robust backfitting algorithm", "topics": [] }, { - "uid": "github/elizabethnewman/hessQuik", - "url": "https://github.com/elizabethnewman/hessQuik", - "rel": "/software/repository/github/elizabethnewman/hessQuik", - "avatar": "https://avatars.githubusercontent.com/u/39045034?v=4", - "description": "Computing gradients and Hessians of feed-forward networks with GPU acceleration", - "topics": [ - "neural-network", - "derivatives", - "gpu-acceleration" - ] + "uid": "github/RAMP-project/RAMP", + "url": "https://github.com/RAMP-project/RAMP", + "rel": "/software/repository/github/RAMP-project/RAMP", + "avatar": "https://avatars.githubusercontent.com/u/65850039?v=4", + "description": "Repository of the open-source RAMP model for generating multi-energy loads profiles", + "topics": [] }, { - "uid": "github/range-et/PGL", - "url": "https://github.com/range-et/PGL", - "rel": "/software/repository/github/range-et/PGL", - "avatar": "https://avatars.githubusercontent.com/u/64481693?v=4", - "description": "The Plebeian Graph Library: A WebGL based network visusalisation and diagnostics package", + "uid": "github/jbussemaker/SBArchOpt", + "url": "https://github.com/jbussemaker/SBArchOpt", + "rel": "/software/repository/github/jbussemaker/SBArchOpt", + "avatar": "https://avatars.githubusercontent.com/u/6481229?v=4", + "description": "Surrogate-Based Architecture Optimization toolbox", "topics": [ - "data-visualization", - "graph", - "graph-theory", - "visualization", - "webgl" + "architecture", + "multi-objective", + "optimization", + "sbo", + "system" ] }, { - "uid": "github/astroweaver/the_farmer", - "url": "https://github.com/astroweaver/the_farmer", - "rel": "/software/repository/github/astroweaver/the_farmer", - "avatar": "https://avatars.githubusercontent.com/u/39458378?v=4", - "description": "The Farmer", + "uid": "github/SarveshVGharat/Plages-Identification", + "url": "https://github.com/SarveshVGharat/Plages-Identification", + "rel": "/software/repository/github/SarveshVGharat/Plages-Identification", + "avatar": "https://avatars.githubusercontent.com/u/89913681?v=4", + "description": null, "topics": [] }, { - "uid": "github/fmicompbio/ez_zarr", - "url": "https://github.com/fmicompbio/ez_zarr", - "rel": "/software/repository/github/fmicompbio/ez_zarr", - "avatar": "https://avatars.githubusercontent.com/u/35133054?v=4", - "description": "GIve easy, high-level access to ome-zarr fileset", + "uid": "github/twinl/website", + "url": "https://github.com/twinl/website", + "rel": "/software/repository/github/twinl/website", + "avatar": "https://avatars2.githubusercontent.com/u/33551224?v=4", + "description": "TwiNL: website code", + "topics": [] + }, + { + "uid": "github/amrex-astro/Castro", + "url": "https://github.com/AMReX-Astro/Castro", + "rel": "/software/repository/github/amrex-astro/Castro", + "avatar": "https://avatars1.githubusercontent.com/u/28324385?v=4", + "description": "An adaptive mesh, astrophysical compressible (radiation-, magneto-) hydrodynamics simulation code for massively parallel CPU and GPU architectures.", "topics": [ - "ome-zarr" + "hydrodynamics", + "cfd", + "pde", + "gravity", + "radiation", + "castro", + "amr", + "adaptive-mesh-refinement", + "reactions", + "astrophysical-simulation", + "astrophysics" ] }, { - "uid": "github/Electrostatics/apbs", - "url": "https://github.com/Electrostatics/apbs", - "rel": "/software/repository/github/Electrostatics/apbs", - "avatar": "https://avatars.githubusercontent.com/u/6935492?v=4", - "description": "Software for biomolecular electrostatics and solvation calculations", + "uid": "github/amrex-astro/MAESTRO", + "url": "https://github.com/AMReX-Astro/MAESTRO", + "rel": "/software/repository/github/amrex-astro/MAESTRO", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "A low Mach number stellar hydrodynamics code", "topics": [ - "chemistry", - "bioinformatics", - "biophysics" + "hydrodynamics", + "reactions", + "cfd", + "pde", + "low-mach", + "amr", + "adaptive-mesh-refinement", + "maestro", + "astrophysics", + "astrophysical-simulation", + "simulation" ] }, { - "uid": "github/JuliaGeodynamics/GeophysicalModelGenerator.jl", - "url": "https://github.com/JuliaGeodynamics/GeophysicalModelGenerator.jl", - "rel": "/software/repository/github/JuliaGeodynamics/GeophysicalModelGenerator.jl", - "avatar": "https://avatars.githubusercontent.com/u/84014489?v=4", - "description": "Import, process and interpret geophysical data sets to be used in numerical models.", + "uid": "github/amrex-astro/Nyx", + "url": "https://github.com/AMReX-Astro/Nyx", + "rel": "/software/repository/github/amrex-astro/Nyx", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "An adaptive mesh, N-body hydro cosmological simulation code", "topics": [] }, { - "uid": "github/pyccel/pyccel", - "url": "https://github.com/pyccel/pyccel", - "rel": "/software/repository/github/pyccel/pyccel", - "avatar": "https://avatars.githubusercontent.com/u/34218410?v=4", - "description": "Python extension language using accelerators", + "uid": "github/RichardMoot/GrailLight", + "url": "https://github.com/RichardMoot/GrailLight", + "rel": "/software/repository/github/RichardMoot/GrailLight", + "avatar": "https://avatars.githubusercontent.com/u/1473033?v=4", + "description": "Light-weight chart parser for multimodal type-logical grammars", "topics": [ - "hpc", - "mpi", - "openmp", - "fortran", - "dsl", - "sympy", - "openacc", - "python", - "python3", - "transpiler" + "parser", + "parsing", + "logical-grammars", + "logic-programming", + "chart-parser", + "categorial-grammar", + "natural-language-processing", + "natural-language-understanding" ] }, { - "uid": "github/hiddenSymmetries/simsopt", - "url": "https://github.com/hiddenSymmetries/simsopt", - "rel": "/software/repository/github/hiddenSymmetries/simsopt", - "avatar": "https://avatars.githubusercontent.com/u/61125640?v=4", - "description": "Simons Stellarator Optimizer Code", + "uid": "github/RichardMoot/LinearOne", + "url": "https://github.com/RichardMoot/LinearOne", + "rel": "/software/repository/github/RichardMoot/LinearOne", + "avatar": "https://avatars.githubusercontent.com/u/1473033?v=4", + "description": "LinearOne is a prototype theorem prover for first-order (multiplicative, intuitionistic) linear logic.", "topics": [ - "stellarator", - "stellarators", - "plasma", - "fusion", - "optimization", - "plasma-physics", - "nuclear-fusion" + "linear-logic", + "first-order-logic", + "theorem-proving", + "proof-net", + "displacement-calculus-grammars", + "swi-prolog", + "logic-programming", + "latex" ] }, { - "uid": "github/tbrown122387/pf", - "url": "https://github.com/tbrown122387/pf", - "rel": "/software/repository/github/tbrown122387/pf", - "avatar": "https://avatars0.githubusercontent.com/u/1740324?v=4", - "description": "PF: a header only template library for fast particle filtering!", + "uid": "github/showteeth/GEfetch2R", + "url": "https://github.com/showteeth/GEfetch2R", + "rel": "/software/repository/github/showteeth/GEfetch2R", + "avatar": "https://avatars.githubusercontent.com/u/43517166?v=4", + "description": "GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools", "topics": [ - "particle-filter", - "statistics", - "statistical-methods", - "statistical-models" + "geo", + "single-cell-rna-seq", + "zenodo", + "panglaodb", + "ucsc-cell-browser", + "bam", + "fastq", + "format-conversion-tool", + "human-cell-atlas", + "sra", + "cellxgene" ] }, { - "uid": "github/tresoldi/ngesh", - "url": "https://github.com/tresoldi/ngesh", - "rel": "/software/repository/github/tresoldi/ngesh", - "avatar": "https://avatars.githubusercontent.com/u/437239?v=4", - "description": "A Python library for generating random phylogenetic trees and related data", + "uid": "github/cistrome/MIRA", + "url": "https://github.com/cistrome/MIRA", + "rel": "/software/repository/github/cistrome/MIRA", + "avatar": "https://avatars.githubusercontent.com/u/92589386?v=4", + "description": "Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.", "topics": [] }, { - "uid": "github/geoffryan/afterglowpy", - "url": "https://github.com/geoffryan/afterglowpy", - "rel": "/software/repository/github/geoffryan/afterglowpy", - "avatar": "https://avatars.githubusercontent.com/u/3049235?v=4", - "description": "Python module to compute and fit GRB afterglows.", + "uid": "github/exosports/MARGE", + "url": "https://github.com/exosports/MARGE", + "rel": "/software/repository/github/exosports/MARGE", + "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", + "description": "Machine learning Algorithm for Radiative transfer of Generated Exoplanets", "topics": [] }, { - "uid": "github/UNSW-CEEM/nempy", - "url": "https://github.com/UNSW-CEEM/nempy", - "rel": "/software/repository/github/UNSW-CEEM/nempy", - "avatar": "https://avatars.githubusercontent.com/u/33536784?v=4", - "description": "A flexible tool kit for modelling Australia's National Electricity Market dispatch procedure.", + "uid": "github/exosports/transit", + "url": "https://github.com/exosports/transit", + "rel": "/software/repository/github/exosports/transit", + "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", + "description": "Radiative-transfer code for planetary atmospheres", "topics": [] }, { - "uid": "github/UNSW-CEEM/NEMSEER", - "url": "https://github.com/UNSW-CEEM/NEMSEER", - "rel": "/software/repository/github/UNSW-CEEM/NEMSEER", - "avatar": "https://avatars.githubusercontent.com/u/33536784?v=4", - "description": "A package for downloading and handling forecasts for the National Electricity Market (NEM) from the Australian Energy Market Operator (AEMO).", - "topics": [ - "energy", - "python", - "aemo", - "pasa", - "forecast", - "national-electricity-market", - "nem", - "pre-dispatch", - "australia", - "nemweb" - ] + "uid": "github/exosports/BART", + "url": "https://github.com/exosports/BART", + "rel": "/software/repository/github/exosports/BART", + "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", + "description": "Bayesian Atmospheric Radiative Transfer fitting code", + "topics": [] }, { - "uid": "github/lammps/lammps", - "url": "https://github.com/lammps/lammps", - "rel": "/software/repository/github/lammps/lammps", - "avatar": "https://avatars.githubusercontent.com/u/5199009?v=4", - "description": "Public development project of the LAMMPS MD software package ", - "topics": [ - "molecular-dynamics", - "lammps", - "simulation" - ] + "uid": "github/exosports/homer", + "url": "https://github.com/exosports/HOMER", + "rel": "/software/repository/github/exosports/homer", + "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", + "description": "Helper Of My Eternal Retrievals", + "topics": [] }, { - "uid": "github/kim554/wdec", - "url": "https://github.com/kim554/wdec", - "rel": "/software/repository/github/kim554/wdec", - "avatar": "https://avatars.githubusercontent.com/u/17088833?v=4", - "description": "White Dwarf Evolution Code", - "topics": [] + "uid": "github/NorwegianVeterinaryInstitute/ALPPACA", + "url": "https://github.com/NorwegianVeterinaryInstitute/ALPPACA", + "rel": "/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", + "avatar": "https://avatars.githubusercontent.com/u/17404400?v=4", + "description": "A tooL for Prokaryotic Phylogeny And Clustering Analysis", + "topics": [ + "phylogeny", + "clustering", + "nextflow", + "pipeline" + ] }, { - "uid": "github/SharmaLlama/ticktack", - "url": "https://github.com/SharmaLlama/ticktack", - "rel": "/software/repository/github/SharmaLlama/ticktack", - "avatar": "https://avatars.githubusercontent.com/u/72532670?v=4", - "description": "An open-source carbon box model implementation built on JAX.", + "uid": "github/BoevaLab/FREEC", + "url": "https://github.com/BoevaLab/FREEC", + "rel": "/software/repository/github/BoevaLab/FREEC", + "avatar": "https://avatars.githubusercontent.com/u/20792557?v=4", + "description": "Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data", "topics": [] }, { - "uid": "github/tamarervin/SolAster", - "url": "https://github.com/tamarervin/SolAster", - "rel": "/software/repository/github/tamarervin/SolAster", - "avatar": "https://avatars.githubusercontent.com/u/53492021?v=4", - "description": "Python package to independently derive 'Sun-as-a-star' radial velocity variations.", + "uid": "github/pepamengual/UEP", + "url": "https://github.com/pepamengual/UEP", + "rel": "/software/repository/github/pepamengual/UEP", + "avatar": "https://avatars.githubusercontent.com/u/31403723?v=4", + "description": null, "topics": [] }, { - "uid": "github/dgrun/FateID", - "url": "https://github.com/dgrun/FateID", - "rel": "/software/repository/github/dgrun/FateID", - "avatar": "https://avatars.githubusercontent.com/u/11157236?v=4", - "description": "R package for the inference of cell fate bias from single-cell RNA-seq data.", + "uid": "github/konkolyseismolab/seismolab", + "url": "https://github.com/konkolyseismolab/seismolab", + "rel": "/software/repository/github/konkolyseismolab/seismolab", + "avatar": "https://avatars.githubusercontent.com/u/92322252?v=4", + "description": "Open-source python framework for downloading, analyzing, and visualizing data of variable stars from space-based surveys.", "topics": [] }, { - "uid": "github/backyardworlds/wiseview", - "url": "https://github.com/backyardworlds/wiseview", - "rel": "/software/repository/github/backyardworlds/wiseview", - "avatar": "https://avatars.githubusercontent.com/u/25831678?v=4", - "description": "WiseView: Visualizing Motion and Variability of Faint WISE Sources", + "uid": "github/vwesselkamp/ernie-extension", + "url": "https://github.com/vwesselkamp/ernie-extension", + "rel": "/software/repository/github/vwesselkamp/ernie-extension", + "avatar": "https://avatars.githubusercontent.com/u/48735289?v=4", + "description": "Contains the source code of the extension ERNIE from the WPES 2021 paper \"In-Depth Technical and Legal Analysis of Tracking on Health Related Websites with ERNIE Extension\"", "topics": [] }, { - "uid": "github/precice/aste", - "url": "https://github.com/precice/aste", - "rel": "/software/repository/github/precice/aste", - "avatar": "https://avatars.githubusercontent.com/u/12561035?v=4", - "description": "Artificial Solver Testing Environment", + "uid": "github/drwaseemsheikh/audiometry", + "url": "https://github.com/drwaseemsheikh/audiometry", + "rel": "/software/repository/github/drwaseemsheikh/audiometry", + "avatar": "https://avatars1.githubusercontent.com/u/56233110?v=4", + "description": "Audiometry is an application framework written in C# and based on WPF and .NET that enables accurate digital recording, search, analysis, graphical visualization, and reproduction of human audio-vestibular impairment test data to assist in hearing loss or disability diagnosis.", "topics": [] }, { - "uid": "github/precice/micro-manager", - "url": "https://github.com/precice/micro-manager", - "rel": "/software/repository/github/precice/micro-manager", - "avatar": "https://avatars.githubusercontent.com/u/12561035?v=4", - "description": "A manager tool to facilitate two-scale coupling in multi-physics simulations using preCICE.", + "uid": "github/NASA-PDS/naif-pds4-bundler", + "url": "https://github.com/NASA-PDS/naif-pds4-bundler", + "rel": "/software/repository/github/NASA-PDS/naif-pds4-bundler", + "avatar": "https://avatars.githubusercontent.com/u/46757714?v=4", + "description": "Package to generate PDS4 SPICE Kernels Archives", "topics": [ - "coupling", - "macro-micro", - "multiphysics", - "multiscale", - "research-and-development" + "python", + "planetary-science", + "planetary-data", + "data", + "archive", + "spice", + "geometry", + "geometry-processing", + "navigation" ] }, { - "uid": "github/huishenlab/biscuit", - "url": "https://github.com/huishenlab/biscuit", - "rel": "/software/repository/github/huishenlab/biscuit", - "avatar": "https://avatars.githubusercontent.com/u/57234878?v=4", - "description": "BISulfite-seq CUI Toolkit", + "uid": "github/AnantharamanLab/vRhyme", + "url": "https://github.com/AnantharamanLab/vRhyme", + "rel": "/software/repository/github/AnantharamanLab/vRhyme", + "avatar": "https://avatars.githubusercontent.com/u/47664496?v=4", + "description": "Binning Virus Genomes from Metagenomes", "topics": [] }, { - "uid": "github/intelligent-soft-robots/o80", - "url": "https://github.com/intelligent-soft-robots/o80", - "rel": "/software/repository/github/intelligent-soft-robots/o80", - "avatar": "https://avatars.githubusercontent.com/u/62772003?v=4", - "description": "synchronization of c++ processes via a custom python API", + "uid": "github/QITI/pySLM2", + "url": "https://github.com/QITI/pySLM2", + "rel": "/software/repository/github/QITI/pySLM2", + "avatar": "https://avatars.githubusercontent.com/u/25394117?v=4", + "description": null, "topics": [] }, { - "uid": "github/Starfish-develop/Starfish", - "url": "https://github.com/Starfish-develop/Starfish", - "rel": "/software/repository/github/Starfish-develop/Starfish", - "avatar": "https://avatars.githubusercontent.com/u/85192441?v=4", - "description": "Tools for Flexible Spectroscopic Inference", + "uid": "github/pysal/spaghetti", + "url": "https://github.com/pysal/spaghetti", + "rel": "/software/repository/github/pysal/spaghetti", + "avatar": "https://avatars.githubusercontent.com/u/3769919?v=4", + "description": "SPAtial GrapHs: nETworks, Topology, & Inference", "topics": [ - "starfish", + "spatial-network", + "network-analysis", "python", - "spectra", - "astronomy", - "astrophysics", - "inference", - "mcmc" + "graph-theory", + "topology", + "pysal", + "gis" ] }, { - "uid": "github/lllangWV/ParquetDB", - "url": "https://github.com/lllangWV/ParquetDB", - "rel": "/software/repository/github/lllangWV/ParquetDB", - "avatar": "https://avatars.githubusercontent.com/u/120115419?v=4", - "description": null, + "uid": "github/pysal/pysal", + "url": "https://github.com/pysal/pysal", + "rel": "/software/repository/github/pysal/pysal", + "avatar": "https://avatars1.githubusercontent.com/u/3769919?v=4", + "description": "PySAL: Python Spatial Analysis Library Meta-Package", "topics": [] }, { - "uid": "github/interactivereport/OmicsView0", - "url": "https://github.com/interactivereport/OmicsView0", - "rel": "/software/repository/github/interactivereport/OmicsView0", - "avatar": "https://avatars.githubusercontent.com/u/29576524?v=4", - "description": null, + "uid": "github/pysal/spopt", + "url": "https://github.com/pysal/spopt", + "rel": "/software/repository/github/pysal/spopt", + "avatar": "https://avatars.githubusercontent.com/u/3769919?v=4", + "description": "Spatial Optimization", + "topics": [ + "spatial-optimization", + "regionalization", + "facility-location", + "routing", + "transportation", + "spatial-analysis", + "location-allocation", + "location-modeling", + "resource-planning", + "python" + ] + }, + { + "uid": "github/legacysurvey/legacypipe", + "url": "https://github.com/legacysurvey/legacypipe", + "rel": "/software/repository/github/legacysurvey/legacypipe", + "avatar": "https://avatars.githubusercontent.com/u/13069388?v=4", + "description": "Image reduction pipeline for the DESI Legacy Imaging Surveys, using the Tractor framework", "topics": [] }, { - "uid": "github/interactivereport/scRNASequest", - "url": "https://github.com/interactivereport/scRNAsequest", - "rel": "/software/repository/github/interactivereport/scRNASequest", - "avatar": "https://avatars.githubusercontent.com/u/29576524?v=4", - "description": "scRNASequest: an ecosystem of scRNA-seq analysis, visualization and publishing", + "uid": "github/legacysurvey/unwise_psf", + "url": "https://github.com/legacysurvey/unwise_psf", + "rel": "/software/repository/github/legacysurvey/unwise_psf", + "avatar": "https://avatars.githubusercontent.com/u/13069388?v=4", + "description": "per-coadd PSF for unWISE forced photometry", "topics": [] }, { - "uid": "github/ashleychontos/pySYD", - "url": "https://github.com/ashleychontos/pySYD", - "rel": "/software/repository/github/ashleychontos/pySYD", - "avatar": "https://avatars.githubusercontent.com/u/13820495?v=4", - "description": "automated measurements of global asteroseismic parameters", + "uid": "github/natir/rustyread", + "url": "https://github.com/natir/rustyread", + "rel": "/software/repository/github/natir/rustyread", + "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", + "description": "A long read simulator based on badread idea", "topics": [ - "time-series-analysis", - "asteroseismology", - "power-spectrum-analysis", - "photometry", - "kepler", - "k2", - "tess", - "astronomy", - "astrophysics", - "fundamental-analysis", - "stars", - "stellar-parameters", - "stellar-physics", - "stellar-astrophysics", - "python" + "bioinformatics", + "long-reads" ] }, { - "uid": "github/venkateshgopinath/FAlCon-DNS", - "url": "https://github.com/venkateshgopinath/FAlCon-DNS", - "rel": "/software/repository/github/venkateshgopinath/FAlCon-DNS", - "avatar": "https://avatars.githubusercontent.com/u/80627921?v=4", - "description": "FAlCon-DNS (Framework of time schemes for Direct Numerical Simulation of Annular Convection) is a code to solve 2D thermal convection in an annulus. It has a suite of IMEX time integration schemes.", + "uid": "github/natir/vcf2parquet", + "url": "https://github.com/natir/vcf2parquet", + "rel": "/software/repository/github/natir/vcf2parquet", + "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", + "description": "Convert vcf in parquet ", "topics": [] }, { - "uid": "github/reneheller/pile-up", - "url": "https://github.com/reneheller/pile-up", - "rel": "/software/repository/github/reneheller/pile-up", - "avatar": "https://avatars.githubusercontent.com/u/7735050?v=4", - "description": "A gnuplot script for Monte Carlo simulations of disk and stellar tidal torques acting on hot Jupiters", - "topics": [] + "uid": "github/natir/yacrd", + "url": "https://github.com/natir/yacrd", + "rel": "/software/repository/github/natir/yacrd", + "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", + "description": "Yet Another Chimeric Read Detector", + "topics": [ + "bioinformatics", + "long-reads", + "sequence", + "chimera" + ] }, { - "uid": "github/gnave/Xgremlin", - "url": "https://github.com/gnave/Xgremlin", - "rel": "/software/repository/github/gnave/Xgremlin", - "avatar": "https://avatars.githubusercontent.com/u/11167058?v=4", - "description": "A code for analyzing interferograms and spectra from Fourier transform spectrometers", + "uid": "github/jfalconbarroso/BAYES-LOSVD", + "url": "https://github.com/jfalconbarroso/BAYES-LOSVD", + "rel": "/software/repository/github/jfalconbarroso/BAYES-LOSVD", + "avatar": "https://avatars.githubusercontent.com/u/41444018?v=4", + "description": "Non-parametric recovery of the LOSVD of galaxies", "topics": [] }, { - "uid": "github/gnave/pybranch", - "url": "https://github.com/gnave/pybranch", - "rel": "/software/repository/github/gnave/pybranch", - "avatar": "https://avatars.githubusercontent.com/u/11167058?v=4", - "description": "A program to calculate experimental branching fractions and transition probabilities from atomic spectra", - "topics": [] + "uid": "github/cbib/decontaminator", + "url": "https://github.com/cbib/decontaminator", + "rel": "/software/repository/github/cbib/decontaminator", + "avatar": "https://avatars.githubusercontent.com/u/4851523?v=4", + "description": "deep learning contamination filtering tool", + "topics": [ + "deep-learning", + "genomics", + "rnaseq", + "viruses" + ] + }, + { + "uid": "github/radiosunpy/RadioSunPy", + "url": "https://github.com/radiosunpy/RadioSunPy", + "rel": "/software/repository/github/radiosunpy/RadioSunPy", + "avatar": "https://avatars.githubusercontent.com/u/181330173?v=4", + "description": "RATAN-600 radioastronomical solar data and methods Python library ", + "topics": [ + "physics", + "radio-astronomy", + "solar-physics" + ] }, { - "uid": "github/ericmandel/funtools", - "url": "https://github.com/ericmandel/funtools", - "rel": "/software/repository/github/ericmandel/funtools", - "avatar": "https://avatars.githubusercontent.com/u/3028875?v=4", - "description": "a \"minimal buy-in\" FITS library and utility package for astronomical data analysis", + "uid": "github/ABSESpy/ABSESpy", + "url": "https://github.com/ABSESpy/ABSESpy", + "rel": "/software/repository/github/ABSESpy/ABSESpy", + "avatar": "https://avatars.githubusercontent.com/u/148390310?v=4", + "description": "An Agent-based Social-ecological System python framework for coupling human-nature researches. ", "topics": [] }, { - "uid": "github/Jayshil/pycdata", - "url": "https://github.com/Jayshil/pycdata", - "rel": "/software/repository/github/Jayshil/pycdata", - "avatar": "https://avatars.githubusercontent.com/u/40012574?v=4", - "description": "A module to import datasets from various instruments in pycheops", + "uid": "github/bio-tools/biotoolsSum", + "url": "https://github.com/bio-tools/biotoolsSum", + "rel": "/software/repository/github/bio-tools/biotoolsSum", + "avatar": "https://avatars3.githubusercontent.com/u/15219975?v=4", + "description": "bio.tools interface with report generation features", "topics": [] }, { - "uid": "github/plazar/coast_guard", - "url": "https://github.com/plazar/coast_guard", - "rel": "/software/repository/github/plazar/coast_guard", - "avatar": "https://avatars.githubusercontent.com/u/212219?v=4", - "description": "A python/PSRCHIVE-based timing pipeline for reducing Effelsberg data.", - "topics": [] + "uid": "github/ParBLiSS/FastANI", + "url": "https://github.com/ParBLiSS/FastANI", + "rel": "/software/repository/github/ParBLiSS/FastANI", + "avatar": "https://avatars.githubusercontent.com/u/16827085?v=4", + "description": "Fast Whole-Genome Similarity (ANI) Estimation", + "topics": [ + "microbial-genomics" + ] }, { - "uid": "github/plazar/TOASTER", - "url": "https://github.com/plazar/TOASTER", - "rel": "/software/repository/github/plazar/TOASTER", - "avatar": "https://avatars.githubusercontent.com/u/212219?v=4", - "description": "A framework for generating, storing and tracking high-precision TOAs for PTAs as well as observation meta data and processing details.", + "uid": "github/Theano/Theano", + "url": "https://github.com/Theano/Theano", + "rel": "/software/repository/github/Theano/Theano", + "avatar": "https://avatars2.githubusercontent.com/u/970517?v=4", + "description": "Theano is a Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. It can use GPUs and perform efficient symbolic differentiation.", "topics": [] }, { - "uid": "github/vinisalazar/metaphor", - "url": "https://github.com/vinisalazar/metaphor", - "rel": "/software/repository/github/vinisalazar/metaphor", - "avatar": "https://avatars.githubusercontent.com/u/17276653?v=4", - "description": "Metaphor: a general-purpose workflow for assembly and binning of metagenomes", + "uid": "github/signaturescience/skater", + "url": "https://github.com/signaturescience/skater", + "rel": "/software/repository/github/signaturescience/skater", + "avatar": "https://avatars.githubusercontent.com/u/36040935?v=4", + "description": "SKATE R Utilities", "topics": [] }, { - "uid": "github/MIT-LAE/TASOPT.jl", - "url": "https://github.com/MIT-LAE/TASOPT.jl", - "rel": "/software/repository/github/MIT-LAE/TASOPT.jl", - "avatar": "https://avatars.githubusercontent.com/u/98771357?v=4", - "description": "Medium fidelity aircraft-propulsion system design and optimization. ", - "topics": [] + "uid": "github/fjprichard/PyAFBF", + "url": "https://github.com/fjprichard/PyAFBF", + "rel": "/software/repository/github/fjprichard/PyAFBF", + "avatar": "https://avatars.githubusercontent.com/u/84329965?v=4", + "description": "A python library for sampling image textures from the anisotropic fractional Brownian field.", + "topics": [ + "texture-synthesis", + "random-field", + "random-fields", + "image-synthesis", + "fractional-gaussian-noise", + "fractional-brownian-motion", + "anisotropy" + ] }, { - "uid": "github/jpierel14/sntd", - "url": "https://github.com/jpierel14/sntd", - "rel": "/software/repository/github/jpierel14/sntd", - "avatar": "https://avatars.githubusercontent.com/u/22748184?v=4", - "description": "SNTD is a Python package dedicated to measuring time delays for strongly lensed and multiply-imaged SN. The package can simulate lensed SN, fit for each SN time delay, and propagate the results all the way through to cosmological constraints.", + "uid": "github/ALive-research/Slicer-Liver", + "url": "https://github.com/ALive-research/Slicer-Liver", + "rel": "/software/repository/github/ALive-research/Slicer-Liver", + "avatar": "https://avatars.githubusercontent.com/u/65019699?v=4", + "description": "3D Slicer extension for liver analysis and therapy planning", "topics": [ - "cosmology", - "gravitational-lensing", - "supernova" + "liver", + "visualization", + "analysis", + "3d-slicer-extension", + "surgical-planning" ] }, { - "uid": "github/jpierel14/snsed", - "url": "https://github.com/jpierel14/snsed", - "rel": "/software/repository/github/jpierel14/snsed", - "avatar": "https://avatars.githubusercontent.com/u/22748184?v=4", - "description": null, + "uid": "github/JamesKirk11/Tiberius", + "url": "https://github.com/JamesKirk11/Tiberius", + "rel": "/software/repository/github/JamesKirk11/Tiberius", + "avatar": "https://avatars.githubusercontent.com/u/13677312?v=4", + "description": "The Tiberius pipeline to extract time-series spectra and fit exoplanet transit light curves.", "topics": [] }, { - "uid": "github/sharmalab/eaglescope", - "url": "https://github.com/sharmalab/eaglescope", - "rel": "/software/repository/github/sharmalab/eaglescope", - "avatar": "https://avatars.githubusercontent.com/u/16709393?v=4", - "description": "Hierarchical and Cohort Visualization", + "uid": "github/leraman/Hopla", + "url": "https://github.com/CenterForMedicalGeneticsGhent/Hopla", + "rel": "/software/repository/github/leraman/Hopla", + "avatar": "https://avatars.githubusercontent.com/u/39293794?v=4", + "description": " Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML ", "topics": [] }, { - "uid": "github/tp2vis/distribute", - "url": "https://github.com/tp2vis/distribute", - "rel": "/software/repository/github/tp2vis/distribute", - "avatar": "https://avatars.githubusercontent.com/u/34458220?v=4", - "description": null, + "uid": "github/ColemanRHarris/mxnorm", + "url": "https://github.com/ColemanRHarris/mxnorm", + "rel": "/software/repository/github/ColemanRHarris/mxnorm", + "avatar": "https://avatars.githubusercontent.com/u/29362888?v=4", + "description": "R package to normalize multiplexed imaging data.", "topics": [ - "total", - "power", - "to", - "visibilities", - "tp2vis", - "alma", - "development", - "study" + "r", + "package", + "cran" ] }, { - "uid": "github/cmillion/gPhoton", - "url": "https://github.com/cmillion/gPhoton", - "rel": "/software/repository/github/cmillion/gPhoton", - "avatar": "https://avatars.githubusercontent.com/u/1483210?v=4", - "description": "The GALEX photon database and tools project.", + "uid": "github/mlares/hearsay", + "url": "https://github.com/mlares/hearsay", + "rel": "/software/repository/github/mlares/hearsay", + "avatar": "https://avatars.githubusercontent.com/u/4029546?v=4", + "description": "Simulations for the probability of alien contact", "topics": [] }, { - "uid": "github/q1cui/discourseGT", - "url": "https://github.com/q1cui/discourseGT", - "rel": "/software/repository/github/q1cui/discourseGT", - "avatar": "https://avatars.githubusercontent.com/u/85658927?v=4", - "description": "discourseGT \u2014 Analyze Group Patterns using Graph Theory in Educational Settings", - "topics": [] + "uid": "github/LindaNab/mecor", + "url": "https://github.com/LindaNab/mecor", + "rel": "/software/repository/github/LindaNab/mecor", + "avatar": "https://avatars.githubusercontent.com/u/34091575?v=4", + "description": "measurement error correction", + "topics": [ + "measurement-error", + "statistics", + "linear-models" + ] }, { - "uid": "github/ialbert/genescape-central", - "url": "https://github.com/ialbert/genescape-central", - "rel": "/software/repository/github/ialbert/genescape-central", - "avatar": "https://avatars.githubusercontent.com/u/46249?v=4", - "description": "Gene Ontology subgraph visualizations", + "uid": "github/KarchinLab/open-cravat-readthedocs", + "url": "https://github.com/KarchinLab/open-cravat-readthedocs", + "rel": "/software/repository/github/KarchinLab/open-cravat-readthedocs", + "avatar": "https://avatars.githubusercontent.com/u/12953773?v=4", + "description": null, "topics": [] }, { - "uid": "github/ageller/firefly", - "url": "https://github.com/ageller/Firefly", - "rel": "/software/repository/github/ageller/firefly", - "avatar": "https://avatars.githubusercontent.com/u/753117?v=4", - "description": "A WebGL interactive particle viewer", + "uid": "github/subisarkar/JexoSim", + "url": "https://github.com/subisarkar/JexoSim", + "rel": "/software/repository/github/subisarkar/JexoSim", + "avatar": "https://avatars.githubusercontent.com/u/10596082?v=4", + "description": "JexoSim (JWST Exoplanet Observation Simulator) 2.0, is a time-domain simulator of JWST exoplanet transit observations.", "topics": [] }, { - "uid": "github/cov-lineages/pangoLEARN", - "url": "https://github.com/cov-lineages/pangoLEARN", - "rel": "/software/repository/github/cov-lineages/pangoLEARN", - "avatar": "https://avatars.githubusercontent.com/u/63172559?v=4", - "description": "Store of the trained model for pangolin to access.", + "uid": "github/genomehubs/goat-cli", + "url": "https://github.com/genomehubs/goat-cli", + "rel": "/software/repository/github/genomehubs/goat-cli", + "avatar": "https://avatars.githubusercontent.com/u/25362364?v=4", + "description": "Command Line Interface for Genomes on a Tree.", "topics": [] }, { - "uid": "github/cov-lineages/pangolin", - "url": "https://github.com/cov-lineages/pangolin", - "rel": "/software/repository/github/cov-lineages/pangolin", - "avatar": "https://avatars.githubusercontent.com/u/63172559?v=4", - "description": "Software package for assigning SARS-CoV-2 genome sequences to global lineages.", + "uid": "github/duffell/Duffell_Gap", + "url": "https://github.com/duffell/Duffell_Gap", + "rel": "/software/repository/github/duffell/Duffell_Gap", + "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", + "description": "A 1D Model for the Shape of Planet-Induced Gaps in Protoplanetary Disks", "topics": [] }, { - "uid": "github/HERA-Team/matvis", - "url": "https://github.com/HERA-Team/matvis", - "rel": "/software/repository/github/HERA-Team/matvis", - "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", - "description": "Fast matrix-based visibility simulator", - "topics": [ - "21cm-signal", - "radio-astronomy", - "simulation", - "telescopes" - ] + "uid": "github/duffell/RT1D", + "url": "https://github.com/duffell/RT1D", + "rel": "/software/repository/github/duffell/RT1D", + "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", + "description": "A 1D Model for Rayleigh-Taylor Instability", + "topics": [] }, { - "uid": "github/HERA-Team/aipy", - "url": "https://github.com/HERA-Team/aipy", - "rel": "/software/repository/github/HERA-Team/aipy", - "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", - "description": "Astronomical Interferometry in PYthon (AIPY)", + "uid": "github/duffell/Disco", + "url": "https://github.com/duffell/Disco", + "rel": "/software/repository/github/duffell/Disco", + "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", + "description": "A moving-mesh magnetohydrodynamics code designed for the study of astrophysical disks.", "topics": [] }, { - "uid": "github/HERA-Team/hera_opm", - "url": "https://github.com/HERA-Team/hera_opm", - "rel": "/software/repository/github/HERA-Team/hera_opm", - "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", - "description": "Online processing of HERA data", + "uid": "github/decargroup/pykoop", + "url": "https://github.com/decargroup/pykoop", + "rel": "/software/repository/github/decargroup/pykoop", + "avatar": "https://avatars.githubusercontent.com/u/65682789?v=4", + "description": "Koopman operator identification library in Python, compatible with `scikit-learn`", "topics": [ - "pipeline" + "koopman", + "machine-learning", + "dynamical-systems", + "control", + "scikit-learn" ] }, { - "uid": "github/jpuritz/dDocent", - "url": "https://github.com/jpuritz/dDocent", - "rel": "/software/repository/github/jpuritz/dDocent", - "avatar": "https://avatars.githubusercontent.com/u/4837703?v=4", - "description": "a bash pipeline for RAD sequencing", + "uid": "github/nipy/heudiconv", + "url": "https://github.com/nipy/heudiconv", + "rel": "/software/repository/github/nipy/heudiconv", + "avatar": "https://avatars.githubusercontent.com/u/233707?v=4", + "description": "Flexible DICOM conversion into structured directory layouts", "topics": [] }, { - "uid": "github/google/flax", - "url": "https://github.com/google/flax", - "rel": "/software/repository/github/google/flax", - "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", - "description": "Flax is a neural network library for JAX that is designed for flexibility.", - "topics": [ - "jax" - ] + "uid": "github/shishirdholakia/eclipsoid", + "url": "https://github.com/shishirdholakia/eclipsoid", + "rel": "/software/repository/github/shishirdholakia/eclipsoid", + "avatar": "https://avatars.githubusercontent.com/u/38153050?v=4", + "description": "Transit models for ellipsoidal planets in Jax", + "topics": [] }, { - "uid": "github/google/best", - "url": "https://github.com/google/best", - "rel": "/software/repository/github/google/best", - "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", - "description": "Bam Error Stats Tool (best): analysis of error types in aligned reads.", - "topics": [ - "bioinformatics", - "sequencing" - ] + "uid": "github/FRED-2/OptiType", + "url": "https://github.com/FRED-2/OptiType", + "rel": "/software/repository/github/FRED-2/OptiType", + "avatar": "https://avatars.githubusercontent.com/u/7511864?v=4", + "description": "Precision HLA typing from next-generation sequencing data", + "topics": [] }, { - "uid": "github/google/caliban", - "url": "https://github.com/google/caliban", - "rel": "/software/repository/github/google/caliban", - "avatar": "https://avatars1.githubusercontent.com/u/1342004?v=4", - "description": "Research workflows made easy, locally and in the Cloud.", + "uid": "github/CyclotronResearchCentre/bidsme", + "url": "https://github.com/CyclotronResearchCentre/bidsme", + "rel": "/software/repository/github/CyclotronResearchCentre/bidsme", + "avatar": "https://avatars.githubusercontent.com/u/2012195?v=4", + "description": "Flexible bidsificator for multimodal datasets", "topics": [ - "docker", - "python3", - "research-tool", - "google-cloud", - "ai-platform" + "bids", + "mri-data", + "dicom", + "nifti", + "eeg", + "brainvision" ] }, { - "uid": "github/google/jax", - "url": "https://github.com/google/jax", - "rel": "/software/repository/github/google/jax", - "avatar": "https://avatars.githubusercontent.com/u/1342004?v=4", - "description": "Composable transformations of Python+NumPy programs: differentiate, vectorize, JIT to GPU/TPU, and more", - "topics": [ - "jax" - ] + "uid": "github/elixir-luxembourg/daisy", + "url": "https://github.com/elixir-luxembourg/daisy", + "rel": "/software/repository/github/elixir-luxembourg/daisy", + "avatar": "https://avatars2.githubusercontent.com/u/47946340?v=4", + "description": "Data Information System (DAISY) is a data bookkeeping application designed to help Biomedical Research institutions with their GDPR compliance.", + "topics": [] }, { - "uid": "github/beastraban/INSANE", - "url": "https://github.com/beastraban/INSANE", - "rel": "/software/repository/github/beastraban/INSANE", - "avatar": "https://avatars.githubusercontent.com/u/33986427?v=4", - "description": "INflationary potential Simulator and ANalysis Engine", + "uid": "github/FireflySpectra/firefly_release", + "url": "https://github.com/FireflySpectra/firefly_release", + "rel": "/software/repository/github/FireflySpectra/firefly_release", + "avatar": "https://avatars.githubusercontent.com/u/32545453?v=4", + "description": "Firefly, a full spectral fitting code. This repository contains the main code and examples on how to use it.", "topics": [] }, { - "uid": "github/manchunyeung/wolensing", - "url": "https://github.com/manchunyeung/wolensing", - "rel": "/software/repository/github/manchunyeung/wolensing", - "avatar": "https://avatars.githubusercontent.com/u/84583396?v=4", - "description": null, + "uid": "github/SeaIce-Math/SubZero", + "url": "https://github.com/SeaIce-Math/SubZero", + "rel": "/software/repository/github/SeaIce-Math/SubZero", + "avatar": "https://avatars.githubusercontent.com/u/63267895?v=4", + "description": "Discrete element sea ice model", "topics": [] }, { - "uid": "github/vosjo/speedyfit", - "url": "https://github.com/vosjo/speedyfit", - "rel": "/software/repository/github/vosjo/speedyfit", - "avatar": "https://avatars.githubusercontent.com/u/2445164?v=4", - "description": "Python package to fit single and binary photometric SEDs. Automatically pull archive photometry from the main surveys and use Bayesian inference to derive atmospheric parameters.", + "uid": "github/quatrope/ProperImage", + "url": "https://github.com/quatrope/ProperImage", + "rel": "/software/repository/github/quatrope/ProperImage", + "avatar": "https://avatars.githubusercontent.com/u/53583309?v=4", + "description": "Proper Image utils for astronomy. ", "topics": [ - "photometry", - "mcmc", - "atmospheric-modelling", + "data-analysis-python", + "image-processing", + "coaad-images", + "psf-estimation", "astronomy", - "python" + "zogy", + "image-difference", + "python", + "dia", + "image-subtraction" ] }, { - "uid": "github/marziarivi/RadioLensfit2", - "url": "https://github.com/marziarivi/RadioLensfit2", - "rel": "/software/repository/github/marziarivi/RadioLensfit2", - "avatar": "https://avatars.githubusercontent.com/u/6614454?v=4", - "description": "Radio Weak Lensing shear measurement in the Visibility Domain ", - "topics": [] - }, - { - "uid": "github/aaryapatil/tapify", - "url": "https://github.com/aaryapatil/tapify", - "rel": "/software/repository/github/aaryapatil/tapify", - "avatar": "https://avatars.githubusercontent.com/u/15609154?v=4", - "description": "Multitaper spectrum for time-series analysis", + "uid": "github/quatrope/feets", + "url": "https://github.com/quatrope/feets", + "rel": "/software/repository/github/quatrope/feets", + "avatar": "https://avatars.githubusercontent.com/u/53583309?v=4", + "description": "feATURE eXTRACTOR FOR tIME sERIES", "topics": [ - "spectral-analysis", - "time-series-analysis" + "machine-learning", + "feature-extraction", + "timeseries", + "astronomy", + "python2", + "python3", + "scipy", + "astropy" ] }, { - "uid": "github/vcftools/index.html", - "url": null, - "rel": "/software/repository/github/vcftools/index.html", - "avatar": "", - "description": "a program package designed to provide easily accessible methods for working with complex genetic variation data in the form of VCF files, such as those generated by the 1000 Genomes Project.", + "uid": "github/msolpera/pyUPMASK", + "url": "https://github.com/msolpera/pyUPMASK", + "rel": "/software/repository/github/msolpera/pyUPMASK", + "avatar": "https://avatars.githubusercontent.com/u/49573356?v=4", + "description": "Unsupervised clustering method for stellar clusters.", "topics": [] }, { - "uid": "github/Pometry/Raphtory", - "url": "https://github.com/Pometry/Raphtory", - "rel": "/software/repository/github/Pometry/Raphtory", - "avatar": "https://avatars.githubusercontent.com/u/89028534?v=4", - "description": "Blazingly fast, vectorised, parallel, and scalable temporal graph engine for Rust, Python and JavaScript", + "uid": "github/CRPropa/CRPropa2", + "url": "https://github.com/CRPropa/CRPropa2", + "rel": "/software/repository/github/CRPropa/CRPropa2", + "avatar": "https://avatars.githubusercontent.com/u/2363457?v=4", + "description": "Previous version of CRPropa", + "topics": [] + }, + { + "uid": "github/CRPropa/CRPropa3", + "url": "https://github.com/CRPropa/CRPropa3", + "rel": "/software/repository/github/CRPropa/CRPropa3", + "avatar": "https://avatars.githubusercontent.com/u/2363457?v=4", + "description": " CRPropa is a public astrophysical simulation framework for propagating extraterrestrial ultra-high energy particles. https://crpropa.github.io/CRPropa3/", "topics": [ - "graph", - "graph-algorithms", - "graph-analysis", - "graph-theory", - "graphviz", - "python", - "rust", - "temporal-networks", - "analytics", - "embeddable-database", - "graph-database", - "time-series" + "cosmic-rays", + "propagation", + "monte-carlo-simulation", + "astroparticle-physics" ] }, { - "uid": "github/18parkky/NanoMnT", - "url": "https://github.com/18parkky/NanoMnT", - "rel": "/software/repository/github/18parkky/NanoMnT", - "avatar": "https://avatars.githubusercontent.com/u/111036812?v=4", - "description": "Python package for analyzing STR from ONT data", + "uid": "github/FraunhoferIWES/foxes", + "url": "https://github.com/FraunhoferIWES/foxes", + "rel": "/software/repository/github/FraunhoferIWES/foxes", + "avatar": "https://avatars.githubusercontent.com/u/88376562?v=4", + "description": "Farm Optimization and eXtended yield Evaluation Software", "topics": [] }, { - "uid": "github/SHF-NAILResearchGroup/HINA", - "url": "https://github.com/SHF-NAILResearchGroup/HINA", - "rel": "/software/repository/github/SHF-NAILResearchGroup/HINA", - "avatar": "https://avatars.githubusercontent.com/u/199019566?v=4", + "uid": "github/berczik/phi-GPU-mole", + "url": "https://github.com/berczik/phi-GPU-mole", + "rel": "/software/repository/github/berczik/phi-GPU-mole", + "avatar": "https://avatars.githubusercontent.com/u/109957403?v=4", + "description": "Parallel Hermite Integration on GPU (Direct N-body on MOLE-8.5 cluster)", + "topics": [] + }, + { + "uid": "github/VU-BEAM-Lab/GENRE", + "url": "https://github.com/VU-BEAM-Lab/GENRE", + "rel": "/software/repository/github/VU-BEAM-Lab/GENRE", + "avatar": "https://avatars2.githubusercontent.com/u/64437600?v=4", "description": null, "topics": [] }, { - "uid": "github/pepkit/geofetch", - "url": "https://github.com/pepkit/geofetch", - "rel": "/software/repository/github/pepkit/geofetch", - "avatar": "https://avatars.githubusercontent.com/u/29280461?v=4", - "description": "Builds a PEP from SRA or GEO accessions", - "topics": [ - "download-manager", - "sra", - "geo", - "sra-data", - "metadata" - ] + "uid": "github/light-curve/light-curve", + "url": "https://github.com/light-curve/light-curve", + "rel": "/software/repository/github/light-curve/light-curve", + "avatar": "https://avatars.githubusercontent.com/u/88137069?v=4", + "description": "Collection of Rust packages for time-series analysis", + "topics": [] }, { - "uid": "github/tariqdaouda/CAMAP", - "url": "https://github.com/tariqdaouda/CAMAP", - "rel": "/software/repository/github/tariqdaouda/CAMAP", - "avatar": "https://avatars.githubusercontent.com/u/7224902?v=4", - "description": "Codon Arrangement MAP Predictor, predicting MHC-I Associated Peptides presentation form mRNA", + "uid": "github/light-curve/light-curve-python", + "url": "https://github.com/light-curve/light-curve-python", + "rel": "/software/repository/github/light-curve/light-curve-python", + "avatar": "https://avatars.githubusercontent.com/u/88137069?v=4", + "description": "light-curve feature extraction library for Python", "topics": [] }, { - "uid": "github/sagepublishing/rejected_article_tracker_pkg", - "url": "https://github.com/sagepublishing/rejected_article_tracker_pkg", - "rel": "/software/repository/github/sagepublishing/rejected_article_tracker_pkg", - "avatar": "https://avatars.githubusercontent.com/u/30350605?v=4", - "description": null, + "uid": "github/OSSOS/SurveySimulator", + "url": "https://github.com/OSSOS/SurveySimulator", + "rel": "/software/repository/github/OSSOS/SurveySimulator", + "avatar": "https://avatars.githubusercontent.com/u/7736642?v=4", + "description": "Simulate detecting TNOs, nearly as fun as really detecting TNOs.", "topics": [] }, { - "uid": "github/OBrink/RanDepict", - "url": "https://github.com/OBrink/RanDepict", - "rel": "/software/repository/github/OBrink/RanDepict", - "avatar": "https://avatars.githubusercontent.com/u/59618901?v=4", - "description": "This repository contains RanDepict, an easy-to-use utility to generate a big variety of chemical structure depictions (random depiction styles and image augmentations) based on RDKit, CDK, Indigo and PIKAChU.", + "uid": "github/jbattat/pep_core", + "url": "https://github.com/jbattat/pep_core", + "rel": "/software/repository/github/jbattat/pep_core", + "avatar": "https://avatars.githubusercontent.com/u/8468957?v=4", + "description": "PEP: Planetary Ephemeris Program core files", "topics": [] }, { - "uid": "github/YenWenWang/HapDipKinship", - "url": "https://github.com/YenWenWang/HapDipKinship", - "rel": "/software/repository/github/YenWenWang/HapDipKinship", - "avatar": "https://avatars.githubusercontent.com/u/43101774?v=4", - "description": "Algorithms to estimate kinship in haploid-diploid mixed populations", + "uid": "github/rizkg/BBHash", + "url": "https://github.com/rizkg/BBHash", + "rel": "/software/repository/github/rizkg/BBHash", + "avatar": "https://avatars.githubusercontent.com/u/16080526?v=4", + "description": "Bloom-filter based minimal perfect hash function library", "topics": [] }, { - "uid": "github/JoelForamitti/agentpy", - "url": "https://github.com/JoelForamitti/agentpy", - "rel": "/software/repository/github/JoelForamitti/agentpy", - "avatar": "https://avatars.githubusercontent.com/u/57440945?v=4", - "description": "AgentPy is an open-source framework for the development and analysis of agent-based models in Python.", + "uid": "github/single-cell-genetics/cellsnp-lite", + "url": "https://github.com/single-cell-genetics/cellsnp-lite", + "rel": "/software/repository/github/single-cell-genetics/cellsnp-lite", + "avatar": "https://avatars.githubusercontent.com/u/57483384?v=4", + "description": "Efficient genotyping bi-allelic SNPs on single cells", "topics": [ - "agent-based-modeling", - "agent-based-simulation", - "abm", - "agentpy", - "python", - "networks", - "complex-systems", - "networkx", - "salib" + "single-cell", + "genetic-variants", + "genotyping" ] }, { - "uid": "github/astrostat/BASCS", - "url": "https://github.com/astrostat/BASCS", - "rel": "/software/repository/github/astrostat/BASCS", - "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", - "description": "Bayesian Separation of Close Sources", - "topics": [] + "uid": "github/single-cell-genetics/vireo", + "url": "https://github.com/single-cell-genetics/vireo", + "rel": "/software/repository/github/single-cell-genetics/vireo", + "avatar": "https://avatars.githubusercontent.com/u/57483384?v=4", + "description": "Demultiplexing pooled scRNA-seq data with or without genotype reference", + "topics": [ + "single-cells", + "scrna-seq", + "demultiplex", + "donor-deconvolution", + "variational-inference" + ] }, { - "uid": "github/astrostat/TD-CARMA", - "url": "https://github.com/astrostat/TD-CARMA", - "rel": "/software/repository/github/astrostat/TD-CARMA", - "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", - "description": null, + "uid": "github/zarr-developers/zarr-python", + "url": "https://github.com/zarr-developers/zarr-python", + "rel": "/software/repository/github/zarr-developers/zarr-python", + "avatar": "https://avatars0.githubusercontent.com/u/35050297?v=4", + "description": "An implementation of chunked, compressed, N-dimensional arrays for Python.", "topics": [] }, { - "uid": "github/astrostat/Automark", - "url": "https://github.com/astrostat/Automark", - "rel": "/software/repository/github/astrostat/Automark", - "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", - "description": "Automatic marking of marked Poisson process in astronomical high-dimensional datasets", + "uid": "github/ryanvarley/exodata", + "url": "https://github.com/ryanvarley/ExoData", + "rel": "/software/repository/github/ryanvarley/exodata", + "avatar": "https://avatars.githubusercontent.com/u/1278326?v=4", + "description": "Exoplanet catalogue interface and exploratory analysis tool", "topics": [] }, { - "uid": "github/astrostat/LIRA", - "url": "https://github.com/astrostat/LIRA", - "rel": "/software/repository/github/astrostat/LIRA", - "avatar": "https://avatars.githubusercontent.com/u/7632236?v=4", - "description": "Low-counts Image Reconstruction and Analysis", + "uid": "github/hera-team/librarian", + "url": "https://github.com/HERA-Team/librarian", + "rel": "/software/repository/github/hera-team/librarian", + "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", + "description": "The HERA Librarian.", "topics": [] }, { - "uid": "github/nicolet5/DiffCapAnalyzer", - "url": "https://github.com/nicolet5/DiffCapAnalyzer", - "rel": "/software/repository/github/nicolet5/DiffCapAnalyzer", - "avatar": "https://avatars0.githubusercontent.com/u/34557361?v=4", - "description": "A tool for quantitative analysis of differential capacity data! ", + "uid": "github/dalya/WeirdestGalaxies", + "url": "https://github.com/dalya/WeirdestGalaxies", + "rel": "/software/repository/github/dalya/WeirdestGalaxies", + "avatar": "https://avatars.githubusercontent.com/u/3278167?v=4", + "description": "This repository contains the basic outlier detection algorithm that we use to find the weirdest SDSS galaxies.", "topics": [] }, { - "uid": "github/LINNAE-project/SFB-Annotator", - "url": "https://github.com/LINNAE-project/SFB-Annotator", - "rel": "/software/repository/github/LINNAE-project/SFB-Annotator", - "avatar": "https://avatars.githubusercontent.com/u/65170433?v=4", - "description": "This web app is intended for demo purposes only!", + "uid": "github/SimonPfeifer/cows", + "url": "https://github.com/SimonPfeifer/cows", + "rel": "/software/repository/github/SimonPfeifer/cows", + "avatar": "https://avatars.githubusercontent.com/u/32218575?v=4", + "description": null, "topics": [] }, { - "uid": "github/marccanby/linguiphyr", - "url": "https://github.com/marccanby/linguiphyr", - "rel": "/software/repository/github/marccanby/linguiphyr", - "avatar": "https://avatars.githubusercontent.com/u/12547184?v=4", - "description": "Linguistic Phylogenetic Analysis in R", + "uid": "github/OBrink/RanDepict", + "url": "https://github.com/OBrink/RanDepict", + "rel": "/software/repository/github/OBrink/RanDepict", + "avatar": "https://avatars.githubusercontent.com/u/59618901?v=4", + "description": "This repository contains RanDepict, an easy-to-use utility to generate a big variety of chemical structure depictions (random depiction styles and image augmentations) based on RDKit, CDK, Indigo and PIKAChU.", "topics": [] }, { - "uid": "github/ICRAR/shark", - "url": "https://github.com/ICRAR/shark", - "rel": "/software/repository/github/ICRAR/shark", - "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", - "description": null, - "topics": [] + "uid": "github/jodyphelan/TBProfiler", + "url": "https://github.com/jodyphelan/TBProfiler", + "rel": "/software/repository/github/jodyphelan/TBProfiler", + "avatar": "https://avatars.githubusercontent.com/u/8697224?v=4", + "description": "Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data", + "topics": [ + "drug-resistance", + "tb-profiler" + ] }, { - "uid": "github/ICRAR/libprofit", - "url": "https://github.com/ICRAR/libprofit", - "rel": "/software/repository/github/ICRAR/libprofit", - "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", - "description": "A C++ library that produces images based on different luminosity profiles", + "uid": "github/jodyphelan/tb-ml", + "url": "https://github.com/jodyphelan/tb-ml", + "rel": "/software/repository/github/jodyphelan/tb-ml", + "avatar": "https://avatars.githubusercontent.com/u/8697224?v=4", + "description": "A simple tool for creating machine learning antimicrobial resistance prediction pipelines using Docker containers for M. tuberculosis", "topics": [ - "astronomy", - "photometry", - "opencl", - "openmp", - "convolution" + "amr", + "ml" ] }, { - "uid": "github/ICRAR/ProFit", - "url": "https://github.com/ICRAR/ProFit", - "rel": "/software/repository/github/ICRAR/ProFit", - "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", - "description": "ProFit is a galaxy image bulge-disk decomposition program", + "uid": "github/mjuric/galfast", + "url": "https://github.com/mjuric/galfast", + "rel": "/software/repository/github/mjuric/galfast", + "avatar": "https://avatars.githubusercontent.com/u/620059?v=4", + "description": "Milky Way Mock Catalog Generator", "topics": [] }, { - "uid": "github/hpparvi/opents", - "url": "https://github.com/hpparvi/opents", - "rel": "/software/repository/github/hpparvi/opents", - "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", - "description": "Open exoplanet transit search pipeline", + "uid": "github/Multiscale-Genomics/VRE", + "url": "https://github.com/Multiscale-Genomics/VRE", + "rel": "/software/repository/github/Multiscale-Genomics/VRE", + "avatar": "https://avatars.githubusercontent.com/u/19903538?v=4", + "description": "MuG Virtual Research Environment", "topics": [ - "exoplanets", - "tess", - "kepler", - "k2", - "transiting-exoplanets", - "transiting-planets", - "astronomy" + "php", + "vre" ] }, { - "uid": "github/hpparvi/PyTransit", - "url": "https://github.com/hpparvi/PyTransit", - "rel": "/software/repository/github/hpparvi/PyTransit", - "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", - "description": "Fast and easy exoplanet transit light curve modelling.", + "uid": "github/WelbornGroup/ELECTRIC", + "url": "https://github.com/WelbornGroup/ELECTRIC", + "rel": "/software/repository/github/WelbornGroup/ELECTRIC", + "avatar": "https://avatars2.githubusercontent.com/u/49160194?v=4", + "description": "ELECTRIC: Electric fields Leveraged from multipole Expansion Calculations in Tinker Rapid Interface Code.", + "topics": [] + }, + { + "uid": "github/mgieles/limepy", + "url": "https://github.com/mgieles/limepy", + "rel": "/software/repository/github/mgieles/limepy", + "avatar": "https://avatars.githubusercontent.com/u/2310401?v=4", + "description": "Lowered Isothermal Model Explorer in Python", + "topics": [] + }, + { + "uid": "github/mlower/rmnest", + "url": "https://github.com/mlower/rmnest", + "rel": "/software/repository/github/mlower/rmnest", + "avatar": "https://avatars.githubusercontent.com/u/26099415?v=4", + "description": "A standard (and generalised) rotation measures fitting package written in Python.", "topics": [ - "transiting-exoplanets", "python", - "light-curve-models", - "transit-model", - "astrophysics", + "radio", "astronomy", - "exoplanets" + "astrophysics", + "faraday-rotation", + "pulsar", + "frb" ] }, { - "uid": "github/hpparvi/MuSCAT2_transit_pipeline", - "url": "https://github.com/hpparvi/MuSCAT2_transit_pipeline", - "rel": "/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", - "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", - "description": "MuSCAT2 transit analysis pipeline", + "uid": "github/florent-leclercq/pyselfi", + "url": "https://github.com/florent-leclercq/pyselfi", + "rel": "/software/repository/github/florent-leclercq/pyselfi", + "avatar": "https://avatars.githubusercontent.com/u/17030569?v=4", + "description": "Simulator Expansion for Likelihood-Free Inference (SELFI): a python implementation", "topics": [ - "astronomy", - "astrophysics", - "exoplanets", - "photometry", - "exoplanet-transits" + "bayesian-data-analysis", + "likelihood-free-inference", + "approximate-bayesian-computation", + "cosmology", + "large-scale-structure", + "galaxy-clustering" ] }, { - "uid": "github/hpparvi/ldtk", - "url": "https://github.com/hpparvi/ldtk", - "rel": "/software/repository/github/hpparvi/ldtk", - "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", - "description": "Python toolkit for calculating stellar limb darkening profiles and model-specific coefficients using the stellar atmosphere spectrum library by Husser et al. (2013). Described in Parviainen & Aigrain, MNRAS 453, 3821\u20133826 (2015).", + "uid": "github/recipy/recipy", + "url": "https://github.com/recipy/recipy", + "rel": "/software/repository/github/recipy/recipy", + "avatar": "https://avatars2.githubusercontent.com/u/11677462?v=4", + "description": "Effortless method to record provenance in Python", "topics": [ "python", - "limb-darkening-profiles", - "limb-darkening-models", - "astrophysics", - "astronomy", - "exoplanets", - "exoplanet-transits" + "recipy", + "science", + "reproducible-research", + "database", + "provenance" ] }, { - "uid": "github/hpparvi/spright", - "url": "https://github.com/hpparvi/spright", - "rel": "/software/repository/github/hpparvi/spright", - "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", - "description": "Bayesian mass-radius relation for small planets.", - "topics": [ - "astronomy", - "astrophysics", - "exoplanet-analysis", - "exoplanets" - ] + "uid": "github/xinglunju/pyAmor", + "url": "https://github.com/xinglunju/pyAmor", + "rel": "/software/repository/github/xinglunju/pyAmor", + "avatar": "https://avatars.githubusercontent.com/u/3944252?v=4", + "description": "python code to derive temperatures using Ammonia spectral lines", + "topics": [] }, { - "uid": "github/radis/radis", - "url": "https://github.com/radis/radis", - "rel": "/software/repository/github/radis/radis", - "avatar": "https://avatars.githubusercontent.com/u/35809936?v=4", - "description": "\ud83c\udf31 A fast line-by-line code for high-resolution infrared molecular spectra", - "topics": [ - "spectroscopy", - "spectra", - "infrared", - "hitran", - "hitemp", - "plasma", - "plasma-physics", - "combustion", - "radiation", - "astrophysics", - "exoplanets", - "closember" - ] + "uid": "github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", + "url": "https://github.com/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", + "rel": "/software/repository/github/Liltsliverfish/A-time-series-reconstruction-method-of-massive-astronomical-catalogues-based-on-Spark", + "avatar": "https://avatars.githubusercontent.com/u/55935283?v=4", + "description": "A method for time-series reconstruction of massive astronomical catalogues.", + "topics": [] }, { - "uid": "github/lcpp-org/RustBCA", - "url": "https://github.com/lcpp-org/RustBCA", - "rel": "/software/repository/github/lcpp-org/RustBCA", - "avatar": "https://avatars.githubusercontent.com/u/37936084?v=4", - "description": "A Binary Collision Approximation (BCA) code for arbitrary ion-material interactions", + "uid": "github/ronshnapp/MyPTV", + "url": "https://github.com/ronshnapp/MyPTV", + "rel": "/software/repository/github/ronshnapp/MyPTV", + "avatar": "https://avatars.githubusercontent.com/u/34024910?v=4", + "description": "MyPTV is an open source library designed for 3D particle Tracking (3D-PTV) measurements", "topics": [ - "binary-collision-approximation", - "ion-solid-interactions", - "plasma-material-interactions", - "fusion", - "materials-science", - "sputtering", - "implantation", - "range", - "bca-codes", - "bca", - "incident-ion", - "ion-material-interactions", - "rust", - "binary-collisions", - "nuclear-fusion", - "simulation", - "yamamura", - "bohdansky", - "nuclear-stopping", - "electronic-stopping" + "python", + "particle-tracking", + "fluid-mechanics", + "experiments", + "measurements", + "photogrammetry", + "turbulence", + "3d-ptv" ] }, { - "uid": "github/ppmim/PAPI4K", - "url": "https://github.com/ppmim/PAPI4K", - "rel": "/software/repository/github/ppmim/PAPI4K", - "avatar": "https://avatars.githubusercontent.com/u/44784?v=4", - "description": "PANIC data reduction pipeline", - "topics": [ - "data", - "infra-red", - "processing", - "python" - ] + "uid": "github/CGATOxford/UMI-tools", + "url": "https://github.com/CGATOxford/UMI-tools", + "rel": "/software/repository/github/CGATOxford/UMI-tools", + "avatar": "https://avatars.githubusercontent.com/u/5339854?v=4", + "description": "Tools for handling Unique Molecular Identifiers in NGS data sets", + "topics": [] }, { - "uid": "github/SouthGreenPlatform/PyRice", - "url": "https://github.com/SouthGreenPlatform/PyRice", - "rel": "/software/repository/github/SouthGreenPlatform/PyRice", - "avatar": "https://avatars.githubusercontent.com/u/6577134?v=4", - "description": "PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a smart query system which fits the computing resources to optimize the query speed.", - "topics": [ - "rice", - "bioinformatics-analysis" - ] + "uid": "github/RabadanLab/arcasHLA", + "url": "https://github.com/RabadanLab/arcasHLA", + "rel": "/software/repository/github/RabadanLab/arcasHLA", + "avatar": "https://avatars.githubusercontent.com/u/7584451?v=4", + "description": "Fast and accurate in silico inference of HLA genotypes from RNA-seq", + "topics": [] }, { - "uid": "github/SNEWS2/snewpy", - "url": "https://github.com/SNEWS2/snewpy", - "rel": "/software/repository/github/SNEWS2/snewpy", - "avatar": "https://avatars.githubusercontent.com/u/56884608?v=4", - "description": "collection of models from the community in common format for use by the SNEWS teams", + "uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", + "url": "https://github.com/SnirMeiri/LCOI_local_crystalline_orientation_identifier", + "rel": "/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", + "avatar": "https://avatars.githubusercontent.com/u/98456826?v=4", + "description": "MATLAB based application for colloidal crystal's directionality detection and analysis. Applies to microscope images of the crystal's cross-section. Able to detect triangular, rectangular and hexagonal local order.", "topics": [] }, { - "uid": "github/singularityhub/sregistry", - "url": "https://github.com/singularityhub/sregistry", - "rel": "/software/repository/github/singularityhub/sregistry", - "avatar": "https://avatars1.githubusercontent.com/u/24552884?v=4", - "description": "server for storage and management of singularity images", - "topics": [ - "singularityhub", - "singularity", - "singularity-containers", - "containers", - "management", - "registry" - ] + "uid": "github/PopMedNet-Team/popmednet", + "url": "https://github.com/PopMedNet-Team/popmednet", + "rel": "/software/repository/github/PopMedNet-Team/popmednet", + "avatar": "https://avatars.githubusercontent.com/u/12749811?v=4", + "description": "This is the repository for the open source code of the distributed data network platform PopMedNet", + "topics": [] }, { - "uid": "github/singularityhub/singularity-hpc", - "url": "https://github.com/singularityhub/singularity-hpc", - "rel": "/software/repository/github/singularityhub/singularity-hpc", - "avatar": "https://avatars.githubusercontent.com/u/24552884?v=4", - "description": "Local filesystem registry for containers (intended for HPC) using Lmod or Environement Modules. Works for users and admins.", + "uid": "github/fjankowsk/fitpdf", + "url": "https://github.com/fjankowsk/fitpdf", + "rel": "/software/repository/github/fjankowsk/fitpdf", + "avatar": "https://avatars.githubusercontent.com/u/10989149?v=4", + "description": "Bayesian distribution fitting for pulsar and FRB data.", "topics": [ - "singularity", - "hpc", - "lmod", - "containers", - "reproducibility" + "astrophysics", + "data-analysis", + "distributions", + "fast-radio-bursts", + "fitting", + "fitting-distributions", + "pulsars", + "python" ] }, { - "uid": "github/singularityhub/singularity-compose", - "url": "https://github.com/singularityhub/singularity-compose", - "rel": "/software/repository/github/singularityhub/singularity-compose", - "avatar": "https://avatars1.githubusercontent.com/u/24552884?v=4", - "description": "orchestration for singularity containers (under development)", + "uid": "github/fjankowsk/scatfit", + "url": "https://github.com/fjankowsk/scatfit", + "rel": "/software/repository/github/fjankowsk/scatfit", + "avatar": "https://avatars.githubusercontent.com/u/10989149?v=4", + "description": "Scattering fits of Fast Radio Burst and pulsar data.", "topics": [ - "singularity-compose", - "container-orchestration", - "singularity" + "astronomy", + "astrophysics", + "fastradiobursts", + "pulsars", + "ionised-media", + "radio-astronomy" ] }, { - "uid": "github/binzhulab/SUITOR", - "url": "https://github.com/binzhulab/SUITOR", - "rel": "/software/repository/github/binzhulab/SUITOR", - "avatar": "https://avatars.githubusercontent.com/u/51965629?v=4", - "description": null, + "uid": "github/matteozennaro/reps", + "url": "https://github.com/matteozennaro/reps", + "rel": "/software/repository/github/matteozennaro/reps", + "avatar": "https://avatars.githubusercontent.com/u/16953721?v=4", + "description": "REPS - rescaled power spectra for initial conditions with massive neutrinos", "topics": [] }, { - "uid": "github/adammoss/supernovae", - "url": "https://github.com/adammoss/supernovae", - "rel": "/software/repository/github/adammoss/supernovae", - "avatar": "https://avatars.githubusercontent.com/u/3430494?v=4", - "description": null, + "uid": "github/jharno/cubep3m", + "url": "https://github.com/jharno/cubep3m", + "rel": "/software/repository/github/jharno/cubep3m", + "avatar": "https://avatars.githubusercontent.com/u/1123485?v=4", + "description": "cosmological n-body code", "topics": [] }, { - "uid": "github/IFCA-Advanced-Computing/FAIR_eva", - "url": "https://github.com/IFCA-Advanced-Computing/FAIR_eva", - "rel": "/software/repository/github/IFCA-Advanced-Computing/FAIR_eva", - "avatar": "https://avatars.githubusercontent.com/u/2565514?v=4", - "description": null, + "uid": "github/PCMSolver/pcmsolver", + "url": "https://github.com/PCMSolver/pcmsolver", + "rel": "/software/repository/github/PCMSolver/pcmsolver", + "avatar": "https://avatars.githubusercontent.com/u/8494579?v=4", + "description": "An API for the Polarizable Continuum Model", "topics": [] }, { - "uid": "github/sunpy/sunpy", - "url": "https://github.com/sunpy/sunpy", - "rel": "/software/repository/github/sunpy/sunpy", - "avatar": "https://avatars0.githubusercontent.com/u/963197?v=4", - "description": "SunPy - Python for Solar Physics", - "topics": [ - "sunpy", - "python", - "astronomy", - "solar", - "astropy", - "solar-physics", - "sun" - ] + "uid": "github/dgrin1/axionCAMB", + "url": "https://github.com/dgrin1/axionCAMB", + "rel": "/software/repository/github/dgrin1/axionCAMB", + "avatar": "https://avatars.githubusercontent.com/u/14116622?v=4", + "description": null, + "topics": [] }, { - "uid": "github/sunpy/ndcube", - "url": "https://github.com/sunpy/ndcube", - "rel": "/software/repository/github/sunpy/ndcube", - "avatar": "https://avatars.githubusercontent.com/u/963197?v=4", - "description": "A base package for multi-dimensional contiguous and non-contiguous coordinate-aware arrays. Maintainers: @danryanirish & @Cadair", + "uid": "github/jrenaud90/TidalPy", + "url": "https://github.com/jrenaud90/TidalPy", + "rel": "/software/repository/github/jrenaud90/TidalPy", + "avatar": "https://avatars.githubusercontent.com/u/6547310?v=4", + "description": "Software suite to perform solid-body tidal dissipation calculations for rocky and icy worlds", "topics": [ - "sunpy", - "nddata", - "wcs", - "numfocus", - "astropy" - ] - }, - { - "uid": "github/smirarab/sepp", - "url": "https://github.com/smirarab/sepp", - "rel": "/software/repository/github/smirarab/sepp", - "avatar": "https://avatars.githubusercontent.com/u/826296?v=4", - "description": "Ensemble of HMM methods (SEPP, TIPP, UPP)", - "topics": [] + "science-research", + "tides", + "exoplanets", + "planetary-science", + "orbital-mechanics", + "orbital-dynamics" + ] }, { - "uid": "github/smirarab/pasta", - "url": "https://github.com/smirarab/pasta", - "rel": "/software/repository/github/smirarab/pasta", - "avatar": "https://avatars.githubusercontent.com/u/826296?v=4", - "description": "PASTA (Practical Alignment using SATe and Transitivity) ", + "uid": "github/liamedeiros/ehtplot", + "url": "https://github.com/liamedeiros/ehtplot", + "rel": "/software/repository/github/liamedeiros/ehtplot", + "avatar": "https://avatars.githubusercontent.com/u/20053280?v=4", + "description": "Plotting functions for the Event Horizon Telescope", "topics": [] }, { - "uid": "github/turbo-sim/TurboFlow", - "url": "https://github.com/turbo-sim/turboflow", - "rel": "/software/repository/github/turbo-sim/TurboFlow", - "avatar": "https://avatars.githubusercontent.com/u/171229041?v=4", - "description": "Meanline model for performance prediction and preliminary design of turbomachinery", + "uid": "github/milicolazo/Pyedra", + "url": "https://github.com/milicolazo/Pyedra", + "rel": "/software/repository/github/milicolazo/Pyedra", + "avatar": "https://avatars.githubusercontent.com/u/43006757?v=4", + "description": null, "topics": [] }, { - "uid": "github/ahmedmoustafa/JAligner", - "url": "https://github.com/ahmedmoustafa/JAligner", - "rel": "/software/repository/github/ahmedmoustafa/JAligner", - "avatar": "https://avatars.githubusercontent.com/u/958957?v=4", - "description": "Biological Sequence Alignment", - "topics": [] + "uid": "github/musevlt/origin", + "url": "https://github.com/musevlt/origin", + "rel": "/software/repository/github/musevlt/origin", + "avatar": "https://avatars.githubusercontent.com/u/28007568?v=4", + "description": "ORIGIN: detectiOn and extRactIon of Galaxy emIssion liNes", + "topics": [ + "python", + "astronomy", + "astrophysics", + "source-detection", + "musevlt" + ] }, { - "uid": "github/takafumi291/ESSENCE", - "url": "https://github.com/takafumi291/ESSENCE", - "rel": "/software/repository/github/takafumi291/ESSENCE", - "avatar": "https://avatars.githubusercontent.com/u/44293952?v=4", - "description": "A python package for evaluating the statistical significance of the image analysis and signal detection under correlated noise in the interferometric images (e.g., ALMA, NOEMA).", + "uid": "github/musevlt/muse-psfr", + "url": "https://github.com/musevlt/muse-psfr", + "rel": "/software/repository/github/musevlt/muse-psfr", + "avatar": "https://avatars.githubusercontent.com/u/28007568?v=4", + "description": "MUSE-PSFR - PSF reconstruction for MUSE WFM-AO", "topics": [ + "python", "astronomy", - "astronomy-astrophysics", - "image", - "noise-generator", - "image-processing", - "statistics" + "astrophysics", + "musevlt", + "adaptive-optics" ] }, { - "uid": "github/pierfied/karmma", - "url": "https://github.com/pierfied/karmma", - "rel": "/software/repository/github/pierfied/karmma", - "avatar": "https://avatars.githubusercontent.com/u/6539506?v=4", - "description": "KaRMMa - Kappa Reconstruction for Mass Mapping", + "uid": "github/mikejohnson51/AHGestimation", + "url": "https://github.com/mikejohnson51/AHGestimation", + "rel": "/software/repository/github/mikejohnson51/AHGestimation", + "avatar": "https://avatars.githubusercontent.com/u/30052272?v=4", + "description": "Estimating robust, mass conserving AHG relationships", "topics": [] }, { - "uid": "github/ester-project/ester", - "url": "https://github.com/ester-project/ester", - "rel": "/software/repository/github/ester-project/ester", - "avatar": "https://avatars.githubusercontent.com/u/9047981?v=4", - "description": "Evolution STEllaire en Rotation.", + "uid": "github/zooniverse/starpy", + "url": "https://github.com/zooniverse/starpy", + "rel": "/software/repository/github/zooniverse/starpy", + "avatar": "https://avatars.githubusercontent.com/u/106856?v=4", + "description": "Code to determine sfh parameters of galaxy populations with emcee", "topics": [] }, { - "uid": "github/simd-everywhere/simde", - "url": "https://github.com/simd-everywhere/simde", - "rel": "/software/repository/github/simd-everywhere/simde", - "avatar": "https://avatars.githubusercontent.com/u/67172048?v=4", - "description": "Implementations of SIMD instruction sets for systems which don't natively support them.", + "uid": "github/jianhuupenn/SpaGCN", + "url": "https://github.com/jianhuupenn/SpaGCN", + "rel": "/software/repository/github/jianhuupenn/SpaGCN", + "avatar": "https://avatars.githubusercontent.com/u/26659799?v=4", + "description": "SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network", "topics": [ - "simd-intrinsics", - "sse", - "neon", - "arm", - "avx", - "simd", - "sse2", - "sse3", - "ssse3", - "sse41", - "sse42", - "avx2", - "avx512", - "fma", - "gfni", - "mmx", - "altivec", - "powerpc", - "arm64", - "vectorization" + "spatial-transcriptomics", + "graph-convolutional-network", + "spatial-domains", + "spatially-variable-genes" ] }, { - "uid": "github/weizhouUMICH/SAIGE", - "url": "https://github.com/weizhouUMICH/SAIGE", - "rel": "/software/repository/github/weizhouUMICH/SAIGE", - "avatar": "https://avatars.githubusercontent.com/u/9952559?v=4", - "description": null, + "uid": "github/mtlam/PyPulse", + "url": "https://github.com/mtlam/PyPulse", + "rel": "/software/repository/github/mtlam/PyPulse", + "avatar": "https://avatars.githubusercontent.com/u/9340836?v=4", + "description": "Python package for handling and analyzing PSRFITS files", + "topics": [ + "psrfits", + "python", + "pulsar", + "psrchive" + ] + }, + { + "uid": "github/jan-orkisz/colume", + "url": "https://github.com/jan-orkisz/colume", + "rel": "/software/repository/github/jan-orkisz/colume", + "avatar": "https://avatars.githubusercontent.com/u/191116973?v=4", + "description": "Estimating volume density of dense insterstellar clouds based on column density maps.", "topics": [] }, { - "uid": "github/ChrisBoettner/skaro", - "url": "https://github.com/ChrisBoettner/skaro", - "rel": "/software/repository/github/ChrisBoettner/skaro", - "avatar": "https://avatars.githubusercontent.com/u/92692767?v=4", - "description": "This project combines the HESTIA suite of high-resolution constrained hydrodynamical galaxy formation simulations with the New Generation Planet Population Synthesis (NGPPS) models from Bern to characterize exoplanet demographics across different regions of the Milky Way.", + "uid": "github/odlomax/spamcart-dev", + "url": "https://github.com/odlomax/spamcart-dev", + "rel": "/software/repository/github/odlomax/spamcart-dev", + "avatar": "https://avatars.githubusercontent.com/u/20695114?v=4", + "description": "Development repository for SPAMCART radiative transfer code", "topics": [] }, { - "uid": "github/gnudatalanguage/gdl", - "url": "https://github.com/gnudatalanguage/gdl", - "rel": "/software/repository/github/gnudatalanguage/gdl", - "avatar": "https://avatars.githubusercontent.com/u/8539759?v=4", - "description": "GDL - GNU Data Language", + "uid": "github/IAMconsortium/pyam", + "url": "https://github.com/IAMconsortium/pyam", + "rel": "/software/repository/github/IAMconsortium/pyam", + "avatar": "https://avatars.githubusercontent.com/u/19565808?v=4", + "description": "Analysis & visualization of energy & climate scenarios", "topics": [ - "astronomy", - "data-analysis", - "antlr", - "python", - "pv-wave", - "programming-language", - "geophysics", - "mapping", - "scientific-computing", - "scientific-visualization", - "plplot", - "gsl-library", - "plotting", - "netcdf", - "hdf5", - "hdf", - "dicom", - "fits-files", - "grib", - "eigen3" + "integrated-assessment", + "scenario", + "analysis", + "iamc-format", + "visualization", + "macro-energy", + "energy-systems", + "modeling", + "timeseries-format", + "integrated-assessment-scenarios", + "scenario-data", + "pyam" ] }, { - "uid": "github/dgobbi/vtk-dicom", - "url": "https://github.com/dgobbi/vtk-dicom", - "rel": "/software/repository/github/dgobbi/vtk-dicom", - "avatar": "https://avatars.githubusercontent.com/u/223404?v=4", - "description": "A set of classes for using DICOM in VTK.", + "uid": "github/danielenricocahall/elephas", + "url": "https://github.com/danielenricocahall/elephas", + "rel": "/software/repository/github/danielenricocahall/elephas", + "avatar": "https://avatars.githubusercontent.com/u/33044223?v=4", + "description": "Distributed Deep learning with Keras & Spark", "topics": [] }, { - "uid": "github/rajeshmondal18/ReionYuga", - "url": "https://github.com/rajeshmondal18/ReionYuga", - "rel": "/software/repository/github/rajeshmondal18/ReionYuga", - "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", - "description": "A semi-numerical code to generate the Epoch of Reionization (EoR) neutral Hydrogen (HI) field.", + "uid": "github/GATB/bcalm", + "url": "https://github.com/GATB/bcalm", + "rel": "/software/repository/github/GATB/bcalm", + "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", + "description": "compacted de Bruijn graph construction in low memory", "topics": [ - "cosmology", - "reionization", - "large-scale-structure", - "semi-numerical", - "21cm-signal", - "eor" + "bioinformatics", + "debruijn", + "unitigs", + "graph" ] }, { - "uid": "github/rajeshmondal18/MAPS", - "url": "https://github.com/rajeshmondal18/MAPS", - "rel": "/software/repository/github/rajeshmondal18/MAPS", - "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", - "description": "The Multi-frequency Angular Power Spectrum (MAPS) estimator", - "topics": [] - }, - { - "uid": "github/rajeshmondal18/N-body", - "url": "https://github.com/rajeshmondal18/N-body", - "rel": "/software/repository/github/rajeshmondal18/N-body", - "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", - "description": "A code to compute the non-linear evolution of the cosmological matter density contrast.", + "uid": "github/GATB/gatb-core", + "url": "https://github.com/GATB/gatb-core", + "rel": "/software/repository/github/GATB/gatb-core", + "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", + "description": "Core library of the Genome Analysis Toolbox with de-Bruijn graph", "topics": [ - "cosmology", - "simulation", - "n-body", - "particle-mesh", - "reionization", - "nbody", - "parallel" + "bioinformatics", + "de-bruijn-graphs", + "genomics", + "gatb" ] }, { - "uid": "github/rajeshmondal18/DviSukta", - "url": "https://github.com/rajeshmondal18/DviSukta", - "rel": "/software/repository/github/rajeshmondal18/DviSukta", - "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", - "description": "A direct estimator of the bispectrum", + "uid": "github/GATB/simka", + "url": "https://github.com/GATB/simka", + "rel": "/software/repository/github/GATB/simka", + "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", + "description": "Simka and SimkaMin are comparative metagenomics methods dedicated to NGS datasets.", "topics": [] }, { - "uid": "github/rajeshmondal18/FoF-Halo-finder", - "url": "https://github.com/rajeshmondal18/FoF-Halo-finder", - "rel": "/software/repository/github/rajeshmondal18/FoF-Halo-finder", - "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", - "description": "A code to identify the location and size of the gravitationally collapsed dark matter halos.", + "uid": "github/GATB/MindTheGap", + "url": "https://github.com/GATB/MindTheGap", + "rel": "/software/repository/github/GATB/MindTheGap", + "avatar": "https://avatars.githubusercontent.com/u/10297284?v=4", + "description": "MindTheGap is a SV caller for short read sequencing data dedicated to insertion variants (all sizes and types). It can also be used as a local assembly tool.", "topics": [ - "cosmology", - "halo-finding", - "halos", - "reionization", - "n-body", - "fof-halo-finder", - "collapsed-objects", - "algorithm" + "bioinformatics", + "genomics", + "gatb", + "debruijn-graph", + "structural-variants" ] }, { - "uid": "github/bvalot/pyMLST", - "url": "https://github.com/bvalot/pyMLST", - "rel": "/software/repository/github/bvalot/pyMLST", - "avatar": "https://avatars.githubusercontent.com/u/16573222?v=4", - "description": "whole genome MLST analysis ", - "topics": [] + "uid": "github/Robaina/Pynteny", + "url": "https://github.com/Robaina/Pynteny", + "rel": "/software/repository/github/Robaina/Pynteny", + "avatar": "https://avatars.githubusercontent.com/u/21340147?v=4", + "description": "Query sequence database by HMMs arranged in predefined synteny structure", + "topics": [ + "bioinformatics", + "genomics", + "hmmer", + "metagenomics", + "prokaryotic-genomes", + "synteny", + "hmm", + "python", + "synteny-block", + "computational-biology" + ] }, { - "uid": "github/SciML/DataInterpolations.jl", - "url": "https://github.com/SciML/DataInterpolations.jl", - "rel": "/software/repository/github/SciML/DataInterpolations.jl", - "avatar": "https://avatars.githubusercontent.com/u/21238080?v=4", - "description": "A library of data interpolation and smoothing functions", + "uid": "github/connor-makowski/type_enforced", + "url": "https://github.com/connor-makowski/type_enforced", + "rel": "/software/repository/github/connor-makowski/type_enforced", + "avatar": "https://avatars.githubusercontent.com/u/32932187?v=4", + "description": "A pure python runtime type enforcer for annotations. Enforce types in python functions and methods.", "topics": [] }, { - "uid": "github/SciML/GlobalSensitivity.jl", - "url": "https://github.com/SciML/GlobalSensitivity.jl", - "rel": "/software/repository/github/SciML/GlobalSensitivity.jl", - "avatar": "https://avatars.githubusercontent.com/u/21238080?v=4", - "description": null, + "uid": "github/askap-craco/CELEBI", + "url": "https://github.com/askap-craco/CELEBI", + "rel": "/software/repository/github/askap-craco/CELEBI", + "avatar": "https://avatars.githubusercontent.com/u/93304506?v=4", + "description": "The CRAFT Effortless Localisation and Enhanced Burst Inspection Pipeline", "topics": [] }, { - "uid": "github/ci-for-research/self-hosted-runners", - "url": "https://github.com/ci-for-research/self-hosted-runners", - "rel": "/software/repository/github/ci-for-research/self-hosted-runners", - "avatar": "https://avatars3.githubusercontent.com/u/67105980?v=4", - "description": "Recipe to install and configure a GitHub action runner using Ansible", + "uid": "github/taxprofiler/taxpasta", + "url": "https://github.com/taxprofiler/taxpasta", + "rel": "/software/repository/github/taxprofiler/taxpasta", + "avatar": "https://avatars.githubusercontent.com/u/104501065?v=4", + "description": "TAXnomic Profile Aggregation and STAndardisation", "topics": [ - "continuous-integration", - "github-actions" + "metagenomics", + "python", + "standardisation", + "bioinformatics", + "profiling", + "classification", + "metagenomic-classification", + "taxonomic-classifications", + "taxonomic-profiling" ] }, { - "uid": "github/OpenMS/OpenMS", - "url": "https://github.com/OpenMS/OpenMS", - "rel": "/software/repository/github/OpenMS/OpenMS", - "avatar": "https://avatars.githubusercontent.com/u/5994841?v=4", - "description": "The codebase of the OpenMS project", + "uid": "github/ShubhadeepSadhukhan1993/fastSF", + "url": "https://github.com/ShubhadeepSadhukhan1993/fastSF", + "rel": "/software/repository/github/ShubhadeepSadhukhan1993/fastSF", + "avatar": "https://avatars0.githubusercontent.com/u/60309103?v=4", + "description": "A hybrid parallel C++ code to compute structure function of different order", + "topics": [] + }, + { + "uid": "github/lazear/sage", + "url": "https://github.com/lazear/sage", + "rel": "/software/repository/github/lazear/sage", + "avatar": "https://avatars.githubusercontent.com/u/14057244?v=4", + "description": "Proteomics search & quantification so fast that it feels like magic", "topics": [ - "openms", - "c-plus-plus", - "ms-data", - "mass-spectrometry", - "linux", - "macos", - "windows", + "bioinformatics", "proteomics", - "analyses", - "algorithms", - "metabolomics", - "3-clause-bsd", - "hacktoberfest" + "mass-spectrometry" ] }, { - "uid": "github/OpenMS/pyopenms-extra", - "url": "https://github.com/OpenMS/pyopenms-docs", - "rel": "/software/repository/github/OpenMS/pyopenms-extra", - "avatar": "https://avatars.githubusercontent.com/u/5994841?v=4", - "description": "pyOpenMS readthedocs documentation, additional utilities, addons, scripts, and examples.", - "topics": [ - "openms", - "python", - "ms-data", - "hacktoberfest", - "hacktoberfest2022" - ] + "uid": "github/matta-research-group/SwiftPol", + "url": "https://github.com/matta-research-group/SwiftPol", + "rel": "/software/repository/github/matta-research-group/SwiftPol", + "avatar": "https://avatars.githubusercontent.com/u/98654089?v=4", + "description": "Tools for polymer molecular dynamics simulations", + "topics": [] }, { - "uid": "github/AMReX-Combustion/PeleLMeX", - "url": "https://github.com/AMReX-Combustion/PeleLMeX", - "rel": "/software/repository/github/AMReX-Combustion/PeleLMeX", - "avatar": "https://avatars.githubusercontent.com/u/28372265?v=4", - "description": "An adaptive mesh hydrodynamics simulation code for low Mach number reacting flows without level sub-cycling.", + "uid": "github/tpapp/MCMCDiagnostics.jl", + "url": "https://github.com/tpapp/MCMCDiagnostics.jl", + "rel": "/software/repository/github/tpapp/MCMCDiagnostics.jl", + "avatar": "https://avatars.githubusercontent.com/u/84122?v=4", + "description": "Markov Chain Monte Carlo convergence diagnostics in Julia", "topics": [ - "amrex", - "combustion", - "low-mach-number", - "gpu-acceleration" + "julia", + "julia-language", + "bayesian", + "bayesian-statistics", + "bayesian-methods", + "bayesian-inference" ] }, { - "uid": "github/freebayes/freebayes", - "url": "https://github.com/freebayes/freebayes", - "rel": "/software/repository/github/freebayes/freebayes", - "avatar": "https://avatars.githubusercontent.com/u/15815823?v=4", - "description": "Bayesian haplotype-based genetic polymorphism discovery and genotyping.", + "uid": "github/CosmoStat/score", + "url": "https://github.com/CosmoStat/score", + "rel": "/software/repository/github/CosmoStat/score", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Shape COnstraint REstoration", "topics": [] }, { - "uid": "github/MichielsenM/FOAM", - "url": "https://github.com/MichielsenM/FOAM", - "rel": "/software/repository/github/MichielsenM/FOAM", - "avatar": "https://avatars.githubusercontent.com/u/33225623?v=4", - "description": "A Python package for forward asteroseismic modelling of gravity modes", - "topics": [ - "asteroseismology", - "astronomy", - "python", - "astrophysics" - ] + "uid": "github/CosmoStat/shapepipe", + "url": "https://github.com/CosmoStat/shapepipe", + "rel": "/software/repository/github/CosmoStat/shapepipe", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Shape Measurement Pipeline", + "topics": [] }, { - "uid": "github/babelomics/impuSARS", - "url": "https://github.com/babelomics/impuSARS", - "rel": "/software/repository/github/babelomics/impuSARS", - "avatar": "https://avatars.githubusercontent.com/u/6276325?v=4", - "description": "Software tool for the imputation of whole-genome SARS-CoV-2 sequences.", + "uid": "github/CosmoStat/Glimpse", + "url": "https://github.com/CosmoStat/Glimpse", + "rel": "/software/repository/github/CosmoStat/Glimpse", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Sparsity based weak lensing mass-mapping tool", "topics": [] }, { - "uid": "github/minzastro/unidam", - "url": "https://github.com/minzastro/unidam", - "rel": "/software/repository/github/minzastro/unidam", - "avatar": "https://avatars.githubusercontent.com/u/7056224?v=4", - "description": "UniDAM tool: A Unified tool to estimate Distances, Ages, and Masses of stars from spectrophotometric, astrometric (Gaia) and asteroseismic data", + "uid": "github/CosmoStat/mccd", + "url": "https://github.com/CosmoStat/mccd", + "rel": "/software/repository/github/CosmoStat/mccd", + "avatar": "https://avatars.githubusercontent.com/u/16947949?v=4", + "description": "Multi-CCD data-driven PSF modelling", "topics": [ - "astrophysics", - "astronomy", - "python", - "isochrones" + "python" ] }, { - "uid": "github/lnferris/ocean_data_tools", - "url": "https://github.com/lnferris/ocean_data_tools", - "rel": "/software/repository/github/lnferris/ocean_data_tools", - "avatar": "https://avatars1.githubusercontent.com/u/24570061?v=4", - "description": "A MATLAB toolbox for interacting with bulk freely-available oceanographic data.", + "uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", + "url": "https://github.com/uaf-arctic-eco-modeling/dvm-dos-tem", + "rel": "/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", + "avatar": "https://avatars.githubusercontent.com/u/115209183?v=4", + "description": "A process based Dynamic Vegetation, Dynamic Organic Soil, Terrestrial Ecosystem Model.", "topics": [ - "oceanography", - "matlab", - "hycom", - "argo-floats", - "physical-oceanography", - "ocean", - "ocean-data" + "vegetation-dynamics", + "ecosystem-modeling", + "soil-thermal-dynamics", + "fire-dynamics", + "carbon-cycling", + "permafrost-dynamics", + "arctic", + "boreal", + "carbon", + "cryosphere", + "permafrost", + "terrestrial-ecosystem-modeling" ] }, { - "uid": "github/markheckmann/OpenRepGrid.ic", - "url": "https://github.com/markheckmann/OpenRepGrid.ic", - "rel": "/software/repository/github/markheckmann/OpenRepGrid.ic", - "avatar": "https://avatars.githubusercontent.com/u/152927?v=4", - "description": "shiny app for interpretive clustering of repgrids:", + "uid": "github/DrDaveShaw/INCHEM-Py", + "url": "https://github.com/DrDaveShaw/INCHEM-Py", + "rel": "/software/repository/github/DrDaveShaw/INCHEM-Py", + "avatar": "https://avatars.githubusercontent.com/u/75995570?v=4", + "description": "The INdoor CHEMical model in Python (INCHEM-Py) is an open source and accessible box-model built to give researchers deeper insight into the chemical mechanisms behind indoor air chemistry.", + "topics": [] + }, + { + "uid": "github/stinefm/relsad", + "url": "https://github.com/stinefm/relsad", + "rel": "/software/repository/github/stinefm/relsad", + "avatar": "https://avatars.githubusercontent.com/u/61108213?v=4", + "description": "A Python package for reliability assessment of modern distribution systems.", "topics": [ - "repgrid", - "clustering", - "repertory", - "grid", - "constructs", - "shiny" + "electrical-power-engineering", + "reliability" ] }, { - "uid": "github/francescodc87/ipaPy2", - "url": "https://github.com/francescodc87/ipaPy2", - "rel": "/software/repository/github/francescodc87/ipaPy2", - "avatar": "https://avatars.githubusercontent.com/u/16557692?v=4", - "description": "New Python implementation of the Integrated Probabilistic Annotation (IPA) - A Bayesian annotation method for LC/MS data integrating biochemical relations, isotope patterns and adduct formation", + "uid": "github/MIAnalyzer/MIA", + "url": "https://github.com/MIAnalyzer/MIA", + "rel": "/software/repository/github/MIAnalyzer/MIA", + "avatar": "https://avatars.githubusercontent.com/u/96290353?v=4", + "description": "Microsopic Image Analyzer (MIA)", "topics": [] }, { - "uid": "github/ec363/fpcountr", - "url": "https://github.com/ec363/fpcountr", - "rel": "/software/repository/github/ec363/fpcountr", - "avatar": "https://avatars.githubusercontent.com/u/51139488?v=4", - "description": "Fluorescent protein calibration for plate readers", + "uid": "github/IPIS-XieLei/CNTSeg", + "url": "https://github.com/IPIS-XieLei/CNTSeg", + "rel": "/software/repository/github/IPIS-XieLei/CNTSeg", + "avatar": "https://avatars.githubusercontent.com/u/103489682?v=4", + "description": "CNTSeg: A multimodal deep-learning-based network for cranial nerves tract segmentation", "topics": [] }, { - "uid": "github/ec363/parsleyapp", - "url": "https://github.com/ec363/parsleyapp", - "rel": "/software/repository/github/ec363/parsleyapp", - "avatar": "https://avatars.githubusercontent.com/u/51139488?v=4", - "description": "Data parsing (data extraction, tidying and metadata joining) for plate reader export files", + "uid": "github/fenderglass/Flye", + "url": "https://github.com/fenderglass/Flye", + "rel": "/software/repository/github/fenderglass/Flye", + "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", + "description": "De novo assembler for single molecule sequencing reads using repeat graphs", "topics": [] }, { - "uid": "github/NickSwainston/pulsar_spectra", - "url": "https://github.com/NickSwainston/pulsar_spectra", - "rel": "/software/repository/github/NickSwainston/pulsar_spectra", - "avatar": "https://avatars.githubusercontent.com/u/18390846?v=4", - "description": "A simple interface to record pulsar's flux density measurements for a large number of papers and perform fitting of spectral models.", + "uid": "github/fenderglass/Ragout", + "url": "https://github.com/fenderglass/Ragout", + "rel": "/software/repository/github/fenderglass/Ragout", + "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", + "description": "Chromosome-level scaffolding using multiple references", "topics": [] }, { - "uid": "github/colour-science/colour", - "url": "https://github.com/colour-science/colour", - "rel": "/software/repository/github/colour-science/colour", - "avatar": "https://avatars3.githubusercontent.com/u/8414607?v=4", - "description": "Colour Science for Python", - "topics": [ - "color", - "color-science", - "color-space", - "color-spaces", - "colorspace", - "colorspaces", - "colour", - "colour-science", - "colour-space", - "colour-spaces", - "colourspace", - "colourspaces", - "data", - "dataset", - "datasets", - "python", - "spectral-data", - "spectral-dataset", - "spectral-datasets" - ] + "uid": "github/ModellingWebLab/chaste-codegen", + "url": "https://github.com/ModellingWebLab/chaste-codegen", + "rel": "/software/repository/github/ModellingWebLab/chaste-codegen", + "avatar": "https://avatars.githubusercontent.com/u/29707434?v=4", + "description": "Code generation for Chaste based on cellmlmanip", + "topics": [] }, { - "uid": "github/esquivas/guacho", - "url": "https://github.com/esquivas/guacho", - "rel": "/software/repository/github/esquivas/guacho", - "avatar": "https://avatars.githubusercontent.com/u/7807803?v=4", - "description": "A 3D uniform mesh parallel HD/MHD code for astrophysics", + "uid": "github/editeodoro/Bbarolo", + "url": "https://github.com/editeodoro/Bbarolo", + "rel": "/software/repository/github/editeodoro/Bbarolo", + "avatar": "https://avatars.githubusercontent.com/u/10964144?v=4", + "description": "Bbarolo is a 3D fitting tool to derive the kinematics of galaxies from emission-line observations.", "topics": [] }, { - "uid": "github/jkimlab/msPIPE", - "url": "https://github.com/jkimlab/msPIPE", - "rel": "/software/repository/github/jkimlab/msPIPE", - "avatar": "https://avatars.githubusercontent.com/u/19523543?v=4", - "description": null, + "uid": "github/studla/RYUTO", + "url": "https://github.com/studla/RYUTO", + "rel": "/software/repository/github/studla/RYUTO", + "avatar": "https://avatars.githubusercontent.com/u/18547406?v=4", + "description": "Ryuto: Network-Flow based Transcriptome Reconstruction", "topics": [] }, { - "uid": "github/alexrhowe/APOLLO", - "url": "https://github.com/alexrhowe/APOLLO", - "rel": "/software/repository/github/alexrhowe/APOLLO", - "avatar": "https://avatars.githubusercontent.com/u/53234440?v=4", - "description": "Atmosphere retrieval code for exoplanets", + "uid": "github/ltlancas/walter", + "url": "https://github.com/ltlancas/walter", + "rel": "/software/repository/github/ltlancas/walter", + "avatar": "https://avatars.githubusercontent.com/u/15038244?v=4", + "description": "A code to make predictions for the number of resolved stars in a given observation with the future Nancy Grace Roman Space Telescope (RST)", "topics": [] }, { - "uid": "github/exoplanet-dev/celerite2", - "url": "https://github.com/exoplanet-dev/celerite2", - "rel": "/software/repository/github/exoplanet-dev/celerite2", - "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", - "description": "Fast & scalable Gaussian Processes in one dimension", + "uid": "github/CosmoTool/ECLIPSE", + "url": "https://github.com/CosmoTool/ECLIPSE", + "rel": "/software/repository/github/CosmoTool/ECLIPSE", + "avatar": "https://avatars.githubusercontent.com/u/82119585?v=4", + "description": null, "topics": [] }, { - "uid": "github/exoplanet-dev/jaxoplanet", - "url": "https://github.com/exoplanet-dev/jaxoplanet", - "rel": "/software/repository/github/exoplanet-dev/jaxoplanet", - "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", - "description": "Astronomical time series analysis with JAX", + "uid": "github/BrownDwarf/gollum", + "url": "https://github.com/BrownDwarf/gollum", + "rel": "/software/repository/github/BrownDwarf/gollum", + "avatar": "https://avatars.githubusercontent.com/u/8246702?v=4", + "description": "A microservice for programmatic access to precomputed synthetic spectral model grids in astronomy", "topics": [ "astronomy", + "spectroscopy", + "science", "astrophysics", - "bayesian-inference", - "exoplanets", - "jax", - "python", - "time-series" + "stars", + "physics", + "python" ] }, { - "uid": "github/exoplanet-dev/exoplanet", - "url": "https://github.com/exoplanet-dev/exoplanet", - "rel": "/software/repository/github/exoplanet-dev/exoplanet", - "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", - "description": "Fast & scalable MCMC for all your exoplanet needs! ", + "uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", + "url": "https://github.com/VIRAC-SPACE/Automatic_Correlation_information_system", + "rel": "/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", + "avatar": "https://avatars.githubusercontent.com/u/126678283?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/baharmon/r.earthworks", + "url": "https://github.com/baharmon/r.earthworks", + "rel": "/software/repository/github/baharmon/r.earthworks", + "avatar": "https://avatars.githubusercontent.com/u/10392927?v=4", + "description": "A terrain modeling tool for the GRASS geocomputation engine", "topics": [ - "exoplanet", - "exoplanet-transits", - "exoplanet-radial-velocities", - "mcmc", - "gaussian-processes", - "bayesian-inference", - "pymc3", - "time-series", - "time-series-analysis", - "astronomy", - "astrophysics", - "exoplanets" + "earthworks", + "terrain", + "grass-gis" ] }, { - "uid": "github/jpcoles/mosaic", - "url": "https://github.com/jpcoles/mosaic", - "rel": "/software/repository/github/jpcoles/mosaic", - "avatar": "https://avatars.githubusercontent.com/u/2162148?v=4", - "description": "Multipole Operators in Symbols, Automatically Improved and Condensed", + "uid": "github/nh13/DWGSIM", + "url": "https://github.com/nh13/DWGSIM", + "rel": "/software/repository/github/nh13/DWGSIM", + "avatar": "https://avatars.githubusercontent.com/u/846274?v=4", + "description": "a whole genome simulator for next-generation sequencing based off of wgsim found in SAMtools, which was written by Heng Li, and forked from DNAA. It was modified to handle ABI SOLiD and Ion Torrent data, as well as various assumptions about aligners and positions of indels. Many new features have been subsequently added.", "topics": [] }, { - "uid": "github/jpcoles/glass", - "url": "https://github.com/jpcoles/glass", - "rel": "/software/repository/github/jpcoles/glass", - "avatar": "https://avatars.githubusercontent.com/u/2162148?v=4", - "description": "A parallel, free-form gravitational lens modeling tool and framework", + "uid": "github/drgmk/vis-r", + "url": "https://github.com/drgmk/vis-r", + "rel": "/software/repository/github/drgmk/vis-r", + "avatar": "https://avatars.githubusercontent.com/u/15953646?v=4", + "description": "fast radial profile modelling for radio interferometric data", "topics": [] }, { - "uid": "github/davidharvey1986/pyRRG", - "url": "https://github.com/davidharvey1986/pyRRG", - "rel": "/software/repository/github/davidharvey1986/pyRRG", - "avatar": "https://avatars.githubusercontent.com/u/2930696?v=4", - "description": "pyRRG weak lensing shape measurement code. Measuring the 2nd and 4th order moments it uses a TinyTim model to correct for PSF distortions. It is invariant to number exposures, ortientation of the drizzle images. Using a machine learning algorithm it automatically star and galaxy classifies, howeve the user is able to do this manually if not accurate enough. For more see https://arxiv.org/abs/astro-ph/9905090. For bugs please report them to https://github.com/davidharvey1986/pyRRG or contact harvey@lorentz.leidenuniv.nl", + "uid": "github/McPHAC/McPHAC", + "url": "https://github.com/McPHAC/McPHAC", + "rel": "/software/repository/github/McPHAC/McPHAC", + "avatar": "https://avatars.githubusercontent.com/u/1452620?v=4", + "description": "The McGill Planar Hydrogen Atmosphere Code", "topics": [] }, { - "uid": "github/moead-framework/framework", - "url": "https://github.com/moead-framework/framework", - "rel": "/software/repository/github/moead-framework/framework", - "avatar": "https://avatars.githubusercontent.com/u/57288529?v=4", - "description": "MOEA/D is a general-purpose algorithm framework. It decomposes a multi-objective optimization problem into a number of single-objective optimization sub-problems and then uses a search heuristic to optimize these sub-problems simultaneously and cooperatively.", - "topics": [ - "moead", - "framework", - "multi-objective-optimization", - "multi-objective", - "operations-research", - "pypi", - "modular-framework", - "moea", - "python" - ] - }, - { - "uid": "github/KennethEnevoldsen/augmenty", - "url": "https://github.com/KennethEnevoldsen/augmenty", - "rel": "/software/repository/github/KennethEnevoldsen/augmenty", - "avatar": "https://avatars.githubusercontent.com/u/23721977?v=4", - "description": "Augmenty is an augmentation library based on spaCy for augmenting texts.", - "topics": [ - "augmentation", - "spacy-extension", - "spacy", - "nlp", - "nlproc", - "natural-language-processing", - "python", - "text-classification", - "training-data", - "text-augmentation", - "spacy-nlp" - ] - }, - { - "uid": "github/Rohit-Kundu/ET-NET_Covid-Detection", - "url": "https://github.com/Rohit-Kundu/ET-NET_Covid-Detection", - "rel": "/software/repository/github/Rohit-Kundu/ET-NET_Covid-Detection", - "avatar": "https://avatars.githubusercontent.com/u/80497999?v=4", - "description": "An Ensemble Transfer Learning Network for COVID-19 detection from lung CT-scan images.", - "topics": [ - "deep-learning", - "ensemble-learning", - "covid-19", - "ct-scan-images" - ] + "uid": "github/ckarako/RRATtrap", + "url": "https://github.com/ckarako/RRATtrap", + "rel": "/software/repository/github/ckarako/RRATtrap", + "avatar": "https://avatars.githubusercontent.com/u/12614480?v=4", + "description": "A single-pulse sifting algorithm to identify RRATs and transients using output from Scott Ransom's PRESTO single_pulse_search.py . Code described and applied in Karako-Argaman et al. 2015: http://adsabs.harvard.edu/abs/2015ApJ...809...67K", + "topics": [] }, { - "uid": "github/cylammarco/WDPhotTools", - "url": "https://github.com/cylammarco/WDPhotTools", - "rel": "/software/repository/github/cylammarco/WDPhotTools", - "avatar": "https://avatars.githubusercontent.com/u/2545839?v=4", - "description": "The Python White Dwarf Photometric SED Fitter and Luminosity Function Builder", + "uid": "github/songningqiang/CosmoLED", + "url": "https://github.com/songningqiang/CosmoLED", + "rel": "/software/repository/github/songningqiang/CosmoLED", + "avatar": "https://avatars.githubusercontent.com/u/44472287?v=4", + "description": null, "topics": [] }, { - "uid": "github/cylammarco/ASPIRED", - "url": "https://github.com/cylammarco/ASPIRED", - "rel": "/software/repository/github/cylammarco/ASPIRED", - "avatar": "https://avatars.githubusercontent.com/u/2545839?v=4", - "description": "Automated SpectroPhotometric Image REDuction (ASPIRED)", + "uid": "github/furrer-lab/abn", + "url": "https://github.com/furrer-lab/abn", + "rel": "/software/repository/github/furrer-lab/abn", + "avatar": "https://avatars.githubusercontent.com/u/151543411?v=4", + "description": "Bayesian network analysis in R", "topics": [ - "spectroscopy", - "astronomy", - "astrophysics", - "data-reduction", - "calibration", - "spectrophotometry" + "bayesian-network", + "binomial", + "categorical-data", + "gaussian", + "grouped-datasets", + "mixed-effects", + "multinomial", + "multivariate", + "poisson", + "structure-learning" ] }, { - "uid": "github/nlesc-ave/ave-rest-service", - "url": "https://github.com/nlesc-ave/ave-rest-service", - "rel": "/software/repository/github/nlesc-ave/ave-rest-service", - "avatar": "https://avatars0.githubusercontent.com/u/15281028?v=4", - "description": "visualize (clustered) single-nucleotide variants across genomes", + "uid": "github/diCenzo-GC/Tn-Core-webserver", + "url": "https://github.com/diCenzo-GC/Tn-Core-webserver", + "rel": "/software/repository/github/diCenzo-GC/Tn-Core-webserver", + "avatar": "https://avatars.githubusercontent.com/u/32292590?v=4", + "description": "Help files and sample data for the Tn-Core webserver. The code supporting the web server is also included.", "topics": [] }, { - "uid": "github/leirufeng/iEnhancer-DCSV", - "url": "https://github.com/leirufeng/iEnhancer-DCSV", - "rel": "/software/repository/github/leirufeng/iEnhancer-DCSV", - "avatar": "https://avatars.githubusercontent.com/u/65327942?v=4", - "description": null, + "uid": "github/ntcockroft/STarFish", + "url": "https://github.com/ntcockroft/STarFish", + "rel": "/software/repository/github/ntcockroft/STarFish", + "avatar": "https://avatars0.githubusercontent.com/u/9052387?v=4", + "description": "Tool for predicting the protein targets of bioactive small molecules", "topics": [] }, { - "uid": "github/SuLab/Wikidata-phenomizer", - "url": "https://github.com/SuLab/Wikidata-phenomizer", - "rel": "/software/repository/github/SuLab/Wikidata-phenomizer", - "avatar": "https://avatars3.githubusercontent.com/u/1891115?v=4", - "description": "Incorporate wikidata statements into phenomizer", + "uid": "github/CheerfulUser/starkiller", + "url": "https://github.com/CheerfulUser/starkiller", + "rel": "/software/repository/github/CheerfulUser/starkiller", + "avatar": "https://avatars.githubusercontent.com/u/25831737?v=4", + "description": "Pipeline to simulate and subtract stars and satellites in an IFU data cube.", "topics": [] }, { - "uid": "github/htjb/maxsmooth", - "url": "https://github.com/htjb/maxsmooth", - "rel": "/software/repository/github/htjb/maxsmooth", - "avatar": "https://avatars3.githubusercontent.com/u/40355093?v=4", - "description": "Constrained Derivative Function Optimisation", + "uid": "github/zachetienne/nrpytutorial", + "url": "https://github.com/zachetienne/nrpytutorial", + "rel": "/software/repository/github/zachetienne/nrpytutorial", + "avatar": "https://avatars.githubusercontent.com/u/23526265?v=4", + "description": "NRPy+, BlackHoles@Home, SENRv2, and the NRPy+ Jupyter Tutorial: Python-Based Code Generation for Numerical Relativity... and Beyond!", "topics": [ - "astrophysics", - "science", - "maths", - "physics", - "optimisation", - "optimisation-algorithms" + "automatic", + "code", + "generation", + "bssn", + "covariant", + "hyperbolic", + "pdes", + "python", + "sympy", + "numerical", + "relativity", + "general", + "adm", + "codegen", + "nrpy" ] }, { - "uid": "github/htjb/margarine", - "url": "https://github.com/htjb/margarine", - "rel": "/software/repository/github/htjb/margarine", - "avatar": "https://avatars.githubusercontent.com/u/40355093?v=4", - "description": "Code to replicate posterior probability distributions with bijectors/KDEs and perform marginal KL/bayesian dimensionality calculations.", - "topics": [] - }, - { - "uid": "github/htjb/globalemu", - "url": "https://github.com/htjb/globalemu", - "rel": "/software/repository/github/htjb/globalemu", - "avatar": "https://avatars.githubusercontent.com/u/40355093?v=4", - "description": "Robust and fast global (sky-averaged) 21-cm signal emulation", + "uid": "github/DynaSlum/satsense", + "url": "https://github.com/DynaSlum/satsense", + "rel": "/software/repository/github/DynaSlum/satsense", + "avatar": "https://avatars1.githubusercontent.com/u/23557167?v=4", + "description": "Satsense is a Python library for land use/cover classification using satellite imagery", "topics": [ - "astrophysics", - "cosmology", - "neural-networks", - "emulator" + "satellite-images", + "classification", + "machine-learning", + "machine-learning-algorithms", + "land-use", + "land-cover", + "earth-observation" ] }, { - "uid": "github/OliverFHD/GPUniverse", - "url": "https://github.com/OliverFHD/GPUniverse", - "rel": "/software/repository/github/OliverFHD/GPUniverse", - "avatar": "https://avatars.githubusercontent.com/u/16794844?v=4", - "description": "Modelling holographic quantum fields in finite dimensional Hilbert spaces with Generalised Pauli Operators (GPOs) and overlapping degrees of freedom. Also: simulate overlapping qubits with GPUs.", - "topics": [] - }, - { - "uid": "github/HIPS/autograd", - "url": "https://github.com/HIPS/autograd", - "rel": "/software/repository/github/HIPS/autograd", - "avatar": "https://avatars1.githubusercontent.com/u/7935606?v=4", - "description": "Efficiently computes derivatives of numpy code.", - "topics": [] - }, - { - "uid": "github/yjx1217/RecombineX", - "url": "https://github.com/yjx1217/RecombineX", - "rel": "/software/repository/github/yjx1217/RecombineX", - "avatar": "https://avatars.githubusercontent.com/u/701942?v=4", - "description": "A computational framework for tetrad-based genotyping & recombination landscape analysis", + "uid": "github/dazhwu/pydynpd", + "url": "https://github.com/dazhwu/pydynpd", + "rel": "/software/repository/github/dazhwu/pydynpd", + "avatar": "https://avatars.githubusercontent.com/u/63244649?v=4", + "description": "This python package estimates dynamic panel data model using difference GMM and system GMM.", "topics": [ - "tetrad", - "recombination", - "meiosis", - "spore" + "arellano-bond", + "dynamic-panel-data", + "system-gmm", + "dynamic", + "panel", + "data" ] }, { - "uid": "github/junkoda/sidm-nbody", - "url": "https://github.com/junkoda/sidm-nbody", - "rel": "/software/repository/github/junkoda/sidm-nbody", - "avatar": "https://avatars.githubusercontent.com/u/5052171?v=4", - "description": "Monte Carlo N-body Simulation for Self-Interacting Dark Matter", + "uid": "github/mpip/pfft", + "url": "https://github.com/mpip/pfft", + "rel": "/software/repository/github/mpip/pfft", + "avatar": "https://avatars.githubusercontent.com/u/4056386?v=4", + "description": "Parallel fast Fourier transforms", "topics": [] }, { - "uid": "github/junkoda/cola_halo", - "url": "https://github.com/junkoda/cola_halo", - "rel": "/software/repository/github/junkoda/cola_halo", - "avatar": "https://avatars.githubusercontent.com/u/5052171?v=4", - "description": "Parallel COLA cosmological simulation + 2LPT initial condition generator + FoF halo finder", + "uid": "github/mindearth/mobilkit", + "url": "https://github.com/mindearth/mobilkit", + "rel": "/software/repository/github/mindearth/mobilkit", + "avatar": "https://avatars.githubusercontent.com/u/79261696?v=4", + "description": "A Python Toolkit for Urban Resilience and Disaster Risk Management Analytics using High Frequency Human Mobility Data", "topics": [] }, { - "uid": "github/pyomeca/biosiglive", - "url": "https://github.com/pyomeca/biosiglive", - "rel": "/software/repository/github/pyomeca/biosiglive", - "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", - "description": null, + "uid": "github/mncrowe/QGDipoles.jl", + "url": "https://github.com/mncrowe/QGDipoles.jl", + "rel": "/software/repository/github/mncrowe/QGDipoles.jl", + "avatar": "https://avatars.githubusercontent.com/u/87329513?v=4", + "description": "Julia package for creating steady dipolar vortex solutions to the quasi-geostrophic equations", "topics": [] }, { - "uid": "github/pyomeca/biorbd", - "url": "https://github.com/pyomeca/biorbd", - "rel": "/software/repository/github/pyomeca/biorbd", - "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", - "description": "Biomechanical add-ons to the RigidBody Dynamics Library", - "topics": [] + "uid": "github/AndrewGibbs/PathFinder", + "url": "https://github.com/AndrewGibbs/PathFinder", + "rel": "/software/repository/github/AndrewGibbs/PathFinder", + "avatar": "https://avatars.githubusercontent.com/u/32740541?v=4", + "description": "A Matlab/Octave package for oscillatory integration", + "topics": [ + "oscillatory-integrals", + "steepest-descent", + "saddle-point" + ] }, { - "uid": "github/pyomeca/ezc3d", - "url": "https://github.com/pyomeca/ezc3d", - "rel": "/software/repository/github/pyomeca/ezc3d", - "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", - "description": "Easy to use C3D reader/writer for C++, Python and Matlab", + "uid": "github/hartwigmedical/hmftools", + "url": "https://github.com/hartwigmedical/hmftools", + "rel": "/software/repository/github/hartwigmedical/hmftools", + "avatar": "https://avatars.githubusercontent.com/u/16318013?v=4", + "description": "Various algorithms for analysing genomics data", "topics": [] }, { - "uid": "github/occupationMeasurement/occupationMeasurement", - "url": "https://github.com/occupationMeasurement/occupationMeasurement", - "rel": "/software/repository/github/occupationMeasurement/occupationMeasurement", - "avatar": "https://avatars.githubusercontent.com/u/113119771?v=4", - "description": "A package to help with the (interactive) coding and measurement of occupations", + "uid": "github/RemoteSensingTools/vSmartMOM.jl", + "url": "https://github.com/RemoteSensingTools/vSmartMOM.jl", + "rel": "/software/repository/github/RemoteSensingTools/vSmartMOM.jl", + "avatar": "https://avatars.githubusercontent.com/u/83097293?v=4", + "description": "A full end-to-end modular software suite for radiative transfer and related atmospheric analysis", "topics": [] }, { - "uid": "github/chombo-discharge/chombo-discharge", - "url": "https://github.com/chombo-discharge/chombo-discharge", - "rel": "/software/repository/github/chombo-discharge/chombo-discharge", - "avatar": "https://avatars.githubusercontent.com/u/82454163?v=4", - "description": "Beta release of chombo-discharge, a research code for low-temperature plasma which uses a Cartesian cut-cell formalism.", + "uid": "github/linsalrob/PhiSpy", + "url": "https://github.com/linsalrob/PhiSpy", + "rel": "/software/repository/github/linsalrob/PhiSpy", + "avatar": "https://avatars.githubusercontent.com/u/836231?v=4", + "description": "Prediction of prophages from bacterial genomes", "topics": [] }, { - "uid": "github/dsoave/JLS", - "url": "https://github.com/dsoave/JLS", - "rel": "/software/repository/github/dsoave/JLS", - "avatar": "https://avatars.githubusercontent.com/u/18703690?v=4", - "description": "JLS", - "topics": [] + "uid": "github/qurit/rt-utils", + "url": "https://github.com/qurit/rt-utils", + "rel": "/software/repository/github/qurit/rt-utils", + "avatar": "https://avatars.githubusercontent.com/u/58281965?v=4", + "description": "A minimal Python library to facilitate the creation and manipulation of DICOM RTStructs. ", + "topics": [ + "dicom", + "rtstruct", + "mask", + "roi", + "pydicom", + "ai", + "medical-imaging", + "medical-image-processing", + "nuclear-medicine", + "typed", + "rt-structs", + "binary-masks", + "rt-utils" + ] }, { - "uid": "github/DochtermannLab/BehavioralHeritability", - "url": "https://github.com/DochtermannLab/BehavioralHeritability", - "rel": "/software/repository/github/DochtermannLab/BehavioralHeritability", - "avatar": "https://avatars.githubusercontent.com/u/47366531?v=4", - "description": null, - "topics": [] + "uid": "github/a-slide/pycoQC", + "url": "https://github.com/a-slide/pycoQC", + "rel": "/software/repository/github/a-slide/pycoQC", + "avatar": "https://avatars.githubusercontent.com/u/5701192?v=4", + "description": "pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)", + "topics": [ + "jupyter-notebook", + "generates-plots", + "computing-metrics", + "nanopore" + ] }, { - "uid": "github/DochtermannLab/G-PopComparison", - "url": "https://github.com/DochtermannLab/G-PopComparison", - "rel": "/software/repository/github/DochtermannLab/G-PopComparison", - "avatar": "https://avatars.githubusercontent.com/u/47366531?v=4", - "description": null, + "uid": "github/davidebolo1993/TRiCoLOR", + "url": "https://github.com/davidebolo1993/TRiCoLOR", + "rel": "/software/repository/github/davidebolo1993/TRiCoLOR", + "avatar": "https://avatars3.githubusercontent.com/u/39052119?v=4", + "description": "Tadem Repeats Caller for LOng Reads", "topics": [] }, { - "uid": "github/HenrykHaniewicz/PSRVoid", - "url": "https://github.com/HenrykHaniewicz/PSRVoid", - "rel": "/software/repository/github/HenrykHaniewicz/PSRVoid", - "avatar": "https://avatars.githubusercontent.com/u/19167137?v=4", - "description": "The statistical suite to determine which integrated pulse profiles should go into your times-of-arrival! Also able to mine data from the ATNF catalog.", + "uid": "github/davidebolo1993/VISOR", + "url": "https://github.com/davidebolo1993/VISOR", + "rel": "/software/repository/github/davidebolo1993/VISOR", + "avatar": "https://avatars3.githubusercontent.com/u/39052119?v=4", + "description": "VarIant SimulatOR for short, long and linked reads", "topics": [] }, { - "uid": "github/Rformassspectrometry/Spectra", - "url": "https://github.com/rformassspectrometry/Spectra", - "rel": "/software/repository/github/Rformassspectrometry/Spectra", - "avatar": "https://avatars.githubusercontent.com/u/51361942?v=4", - "description": "Low level infrastructure to handle MS spectra", + "uid": "github/cosmo-sims/DISCO-DJ", + "url": "https://github.com/cosmo-sims/DISCO-DJ", + "rel": "/software/repository/github/cosmo-sims/DISCO-DJ", + "avatar": "https://avatars.githubusercontent.com/u/134970301?v=4", + "description": "DISCO-DJ: DIfferentiable Simulations for COsmology - Done with Jax", "topics": [ - "rstats", - "mass-spectrometry", - "proteomics", - "metabolomics", - "bioconductor", - "hacktoberfest" + "autodiff", + "cosmological-simulations", + "cosmology", + "inference", + "large-scale-structure", + "particle-mesh", + "perturbation-theory", + "cosmology-inference", + "jax" ] }, { - "uid": "github/NVlabs/scene_synthesizer", - "url": "https://github.com/NVlabs/scene_synthesizer", - "rel": "/software/repository/github/NVlabs/scene_synthesizer", - "avatar": "https://avatars.githubusercontent.com/u/2695301?v=4", - "description": "Python package to create manipulation scenes.", + "uid": "github/slzarate/parliament2", + "url": "https://github.com/slzarate/parliament2", + "rel": "/software/repository/github/slzarate/parliament2", + "avatar": "https://avatars0.githubusercontent.com/u/12899963?v=4", + "description": "Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data", "topics": [] }, { - "uid": "github/petigura/terra", - "url": "https://github.com/petigura/terra", - "rel": "/software/repository/github/petigura/terra", - "avatar": "https://avatars.githubusercontent.com/u/694371?v=4", - "description": "Transit Detection Code", + "uid": "github/UM-Bridge/umbridge", + "url": "https://github.com/UM-Bridge/umbridge", + "rel": "/software/repository/github/UM-Bridge/umbridge", + "avatar": "https://avatars.githubusercontent.com/u/84285209?v=4", + "description": null, "topics": [] }, { - "uid": "github/Rostlab/ConSurf", - "url": "https://github.com/Rostlab/ConSurf", - "rel": "/software/repository/github/Rostlab/ConSurf", - "avatar": "https://avatars.githubusercontent.com/u/4093405?v=4", - "description": "Evolutionary conservation estimation of residues or nucleotides", + "uid": "github/chemprop/chemprop_benchmark", + "url": "https://github.com/chemprop/chemprop_benchmark", + "rel": "/software/repository/github/chemprop/chemprop_benchmark", + "avatar": "https://avatars.githubusercontent.com/u/60978260?v=4", + "description": " Chemprop benchmarking scripts and data", "topics": [] }, { @@ -43036,25750 +42031,26762 @@ ] }, { - "uid": "github/mroosmalen/nanosv", - "url": "https://github.com/mroosmalen/nanosv", - "rel": "/software/repository/github/mroosmalen/nanosv", - "avatar": "https://avatars.githubusercontent.com/u/7425822?v=4", - "description": "SV caller for nanopore data", - "topics": [] - }, - { - "uid": "github/kimpenn/VERSE", - "url": "https://github.com/kimpenn/VERSE", - "rel": "/software/repository/github/kimpenn/VERSE", - "avatar": "https://avatars.githubusercontent.com/u/66026549?v=4", - "description": "A versatile and efficient RNA-Seq read counting tool", + "uid": "github/FRBs/FRB", + "url": "https://github.com/FRBs/FRB", + "rel": "/software/repository/github/FRBs/FRB", + "avatar": "https://avatars.githubusercontent.com/u/26460191?v=4", + "description": "Python code related to DM calculations, estimations, and analysis", "topics": [] }, { - "uid": "github/QITI/pySLM2", - "url": "https://github.com/QITI/pySLM2", - "rel": "/software/repository/github/QITI/pySLM2", - "avatar": "https://avatars.githubusercontent.com/u/25394117?v=4", + "uid": "github/Mec-iS/arrowspace-rs", + "url": "https://github.com/Mec-iS/arrowspace-rs", + "rel": "/software/repository/github/Mec-iS/arrowspace-rs", + "avatar": "https://avatars.githubusercontent.com/u/3146196?v=4", "description": null, "topics": [] }, { - "uid": "github/MarkusPic/intensity_duration_frequency_analysis", - "url": "https://github.com/MarkusPic/intensity_duration_frequency_analysis", - "rel": "/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", - "avatar": "https://avatars.githubusercontent.com/u/11568131?v=4", - "description": "heavy rain as a function of the duration and the return period acc. to DWA-A 531 (2012) This program reads the measurement data of the rainfall and calculates the distribution of the rainfall as a function of the return period and the duration for duration steps up to 12 hours (and more) and return period in a range of '0.5a <= T_n <= 100a'", - "topics": [ - "heavy-rain", - "idf", - "intensity-duration-frequency", - "design-rainfall", - "rainfall", - "precipitation", - "analysis", - "duration", - "dwa", - "measurement-data", - "duration-steps", - "return-period", - "dwa-a-531", - "kostra", - "dwd", - "python" - ] - }, - { - "uid": "github/quantum-exeter/SpiDy.jl", - "url": "https://github.com/quantum-exeter/SpiDy.jl", - "rel": "/software/repository/github/quantum-exeter/SpiDy.jl", - "avatar": "https://avatars.githubusercontent.com/u/99965031?v=4", - "description": ":spider: Non-Markovian stochastic SPIn (and harmonic oscillator) DYnamics. ", - "topics": [ - "open-systems", - "spin-dynamics", - "harmonic-oscillator", - "stochastic" - ] - }, - { - "uid": "github/GeoffDuniam/FITS-Code-Examples", - "url": "https://github.com/GeoffDuniam/FITS-Code-Examples", - "rel": "/software/repository/github/GeoffDuniam/FITS-Code-Examples", - "avatar": "https://avatars.githubusercontent.com/u/7960786?v=4", - "description": "Jupyter notes books and code examples for the FITS data modelling paper", - "topics": [] - }, - { - "uid": "github/multiwavelength/gleam", - "url": "https://github.com/multiwavelength/gleam", - "rel": "/software/repository/github/multiwavelength/gleam", - "avatar": "https://avatars.githubusercontent.com/u/59348944?v=4", - "description": "Galaxy Line Emission & Absorption Modeling", - "topics": [ - "astronomy", - "astronomy-library", - "spectroscopy", - "galaxies", - "agn", - "extragalactic", - "spectral-lines", - "emission-lines", - "absorption-lines", - "astronomy-software", - "1d-spectra" - ] - }, - { - "uid": "github/multiwavelength/redshifts", - "url": "https://github.com/multiwavelength/redshifts", - "rel": "/software/repository/github/multiwavelength/redshifts", - "avatar": "https://avatars.githubusercontent.com/u/59348944?v=4", - "description": "Search the VizieR and NED databases for spectroscopic redshifts around positions of interest.", + "uid": "github/shilpagarg/WHdenovo", + "url": "https://github.com/shilpagarg/WHdenovo", + "rel": "/software/repository/github/shilpagarg/WHdenovo", + "avatar": "https://avatars2.githubusercontent.com/u/7416551?v=4", + "description": null, "topics": [] }, { - "uid": "github/meenakshi-kushwaha/mmaqshiny", - "url": "https://github.com/meenakshi-kushwaha/mmaqshiny", - "rel": "/software/repository/github/meenakshi-kushwaha/mmaqshiny", - "avatar": "https://avatars1.githubusercontent.com/u/52627451?v=4", - "description": "R-Shiny package to explore Air-Pollution Mobile Monitoring data ", + "uid": "github/spinicist/riesling", + "url": "https://github.com/spinicist/riesling", + "rel": "/software/repository/github/spinicist/riesling", + "avatar": "https://avatars.githubusercontent.com/u/11050744?v=4", + "description": "Radial Interstices Enable Speedy Low-Volume Imaging", "topics": [] }, { - "uid": "github/atmos-cloud-sim-uj/PyMPDATA", - "url": "https://github.com/atmos-cloud-sim-uj/PyMPDATA", - "rel": "/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", - "avatar": "https://avatars.githubusercontent.com/u/48702007?v=4", - "description": "Numba-accelerated Pythonic implementation of MPDATA with examples in Python, Julia and Matlab", + "uid": "github/JetBrains-Research/spbla", + "url": "https://github.com/JetBrains-Research/spbla", + "rel": "/software/repository/github/JetBrains-Research/spbla", + "avatar": "https://avatars.githubusercontent.com/u/10167268?v=4", + "description": "Sparse Boolean linear algebra for Nvidia Cuda, OpenCL and CPU computations", "topics": [ - "pde-solver", - "numerical-integration", - "advection", - "numba", - "advection-diffusion", - "atmospheric-modelling", + "cplusplus", + "sparse-matrix", + "boolean-algebra", + "cuda", + "opencl", + "graphblas", + "suitesparse", "python", - "simulation", - "research", - "pypi-package" + "graph-algorithms" ] }, { - "uid": "github/atmos-cloud-sim-uj/PySDM", - "url": "https://github.com/atmos-cloud-sim-uj/PySDM", - "rel": "/software/repository/github/atmos-cloud-sim-uj/PySDM", - "avatar": "https://avatars.githubusercontent.com/u/48702007?v=4", - "description": "Pythonic particle-based (super-droplet) warm-rain/aqueous-chemistry cloud microphysics package with box, parcel & 1D/2D prescribed-flow examples in Python, Julia and Matlab", + "uid": "github/elsoroka/Satisfiability.jl", + "url": "https://github.com/elsoroka/Satisfiability.jl", + "rel": "/software/repository/github/elsoroka/Satisfiability.jl", + "avatar": "https://avatars.githubusercontent.com/u/14230800?v=4", + "description": "Specify satisfiability modulo theories problems in Julia and use the SMT-LIB format to interact with SMT solvers.", "topics": [ - "physics-simulation", - "monte-carlo-simulation", - "gpu-computing", - "atmospheric-modelling", - "particle-system", - "numba", - "thrust", - "nvrtc", - "pint", - "atmospheric-physics", - "python", - "simulation", - "gpu", - "cuda", - "research", - "pypi-package" + "satisfiability-modulo-theories", + "smt-lib" ] }, { - "uid": "github/artefactory/choice-learn", - "url": "https://github.com/artefactory/choice-learn", - "rel": "/software/repository/github/artefactory/choice-learn", - "avatar": "https://avatars.githubusercontent.com/u/86767100?v=4", - "description": "Discrete choice modeling in Python with large datasets & models - Assortment & Pricing Optimization .", - "topics": [ - "assortment", - "choice", - "discrete", - "learning", - "machine", - "ml", - "model", - "supermarket", - "gurobi", - "optimization", - "or-tools", - "pricing", - "tensorflow", - "deep", - "neural-networks", - "conditional-logit-model", - "rum", - "choice-modeling" - ] + "uid": "github/akcochrane/TEfits", + "url": "https://github.com/akcochrane/TEfits", + "rel": "/software/repository/github/akcochrane/TEfits", + "avatar": "https://avatars2.githubusercontent.com/u/56330575?v=4", + "description": "R package for streamlined nonlinear regression", + "topics": [] }, { - "uid": "github/RJArthern/WAVI.jl", - "url": "https://github.com/RJArthern/WAVI.jl", - "rel": "/software/repository/github/RJArthern/WAVI.jl", - "avatar": "https://avatars.githubusercontent.com/u/69319382?v=4", - "description": "WAVI ice sheet model", + "uid": "github/pscicluna/precision", + "url": "https://github.com/pscicluna/precision", + "rel": "/software/repository/github/pscicluna/precision", + "avatar": "https://avatars.githubusercontent.com/u/509178?v=4", + "description": "A python pipeline to reduce astronomical IR imaging data. Written with SPHERE data in mind, it provides a fast and easy reduction of bright sources suitable for science. While it may not extract the absolute maximum amount of science, the objective is to provide a means to get science-ready data with minimal computing time or human interaction. Development is ongoing.", "topics": [] }, { - "uid": "github/SietzeN/glottospace", - "url": "https://github.com/SietzeN/glottospace", - "rel": "/software/repository/github/SietzeN/glottospace", - "avatar": "https://avatars.githubusercontent.com/u/29064687?v=4", - "description": "Geospatial analysis of linguistic data", + "uid": "github/CHES2023/PyMsOfa", + "url": "https://github.com/CHES2023/PyMsOfa", + "rel": "/software/repository/github/CHES2023/PyMsOfa", + "avatar": "https://avatars.githubusercontent.com/u/144224535?v=4", + "description": "a Python package for the Standards of Fundamental Astronomy (SOFA) service", "topics": [] }, { - "uid": "github/levitsky/pyteomics", - "url": "https://github.com/levitsky/pyteomics", - "rel": "/software/repository/github/levitsky/pyteomics", - "avatar": "https://avatars.githubusercontent.com/u/3358268?v=4", - "description": "Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provides a growing set of modules to facilitate the most common tasks in proteomics data analysis.", + "uid": "github/AaronDavidSchneider/chemcomp", + "url": "https://github.com/AaronDavidSchneider/chemcomp", + "rel": "/software/repository/github/AaronDavidSchneider/chemcomp", + "avatar": "https://avatars.githubusercontent.com/u/7556347?v=4", + "description": "Modeling the chemical composition of planets formed in protoplanetary disks.", "topics": [] }, { - "uid": "github/astrockragh/Mangrove", - "url": "https://github.com/astrockragh/Mangrove", - "rel": "/software/repository/github/astrockragh/Mangrove", - "avatar": "https://avatars.githubusercontent.com/u/47056775?v=4", - "description": "Using Graph Neural Networks to regress baryonic properties directly from full dark matter merger trees.", + "uid": "github/jrkerns/pylinac", + "url": "https://github.com/jrkerns/pylinac", + "rel": "/software/repository/github/jrkerns/pylinac", + "avatar": "https://avatars.githubusercontent.com/u/4803336?v=4", + "description": "A TG-142 toolkit for doing routine linear accelerator quality assurance", "topics": [ - "astrophysics", - "gnn", - "graphs" + "python", + "medical-physics", + "radiation-oncology" ] }, { - "uid": "github/henrikju/resolve", - "url": "https://github.com/henrikju/resolve", - "rel": "/software/repository/github/henrikju/resolve", - "avatar": "https://avatars.githubusercontent.com/u/2954303?v=4", - "description": "A Bayesian radio aperture synthesis algorithm.", - "topics": [] - }, - { - "uid": "github/mkargo/pipeline", - "url": "https://github.com/mkargo/pipeline", - "rel": "/software/repository/github/mkargo/pipeline", - "avatar": "https://avatars.githubusercontent.com/u/7713971?v=4", - "description": "Data reduction pipeline for e-MERLIN", + "uid": "github/KorfLab/SNAP", + "url": "https://github.com/KorfLab/SNAP", + "rel": "/software/repository/github/KorfLab/SNAP", + "avatar": "https://avatars.githubusercontent.com/u/2348742?v=4", + "description": "Gene prediction software", "topics": [] }, { - "uid": "github/funkyheatmap/funkyheatmap", - "url": "https://github.com/funkyheatmap/funkyheatmap", - "rel": "/software/repository/github/funkyheatmap/funkyheatmap", - "avatar": "https://avatars.githubusercontent.com/u/131779657?v=4", - "description": "Visualising data frames as funky heatmaps \ud83d\udcca", + "uid": "github/wcoulton/CompressedFisher", + "url": "https://github.com/wcoulton/CompressedFisher", + "rel": "/software/repository/github/wcoulton/CompressedFisher", + "avatar": "https://avatars.githubusercontent.com/u/6866783?v=4", + "description": null, "topics": [] }, { - "uid": "github/klevis-a/kinematics-vis", - "url": "https://github.com/klevis-a/kinematics-vis", - "rel": "/software/repository/github/klevis-a/kinematics-vis", - "avatar": "https://avatars.githubusercontent.com/u/22669455?v=4", - "description": "JavaScript application for visualizing and analyzing shoulder joint kinematics", + "uid": "github/konfound-project/konfound", + "url": "https://github.com/konfound-project/konfound", + "rel": "/software/repository/github/konfound-project/konfound", + "avatar": "https://avatars.githubusercontent.com/u/108297920?v=4", + "description": "R package for carrying out sensitivity analysis", "topics": [] }, { - "uid": "github/fabiopardo/qmap", - "url": "https://github.com/fabiopardo/qmap", - "rel": "/software/repository/github/fabiopardo/qmap", - "avatar": "https://avatars.githubusercontent.com/u/13062117?v=4", - "description": "Scaling All-Goals Updates in Reinforcement Learning Using Convolutional Neural Networks", - "topics": [ - "reinforcement-learning", - "q-learning", - "mario-bros" - ] - }, - { - "uid": "github/fabiopardo/tonic", - "url": "https://github.com/fabiopardo/tonic", - "rel": "/software/repository/github/fabiopardo/tonic", - "avatar": "https://avatars.githubusercontent.com/u/13062117?v=4", - "description": "Tonic RL library", + "uid": "github/jiujiezz/tsnad", + "url": "https://github.com/jiujiezz/tsnad", + "rel": "/software/repository/github/jiujiezz/tsnad", + "avatar": "https://avatars.githubusercontent.com/u/19741719?v=4", + "description": "Detecting somatic mutations and predicting tumor-specific neo-antigens", "topics": [] }, { - "uid": "github/djbard/ccogs", - "url": "https://github.com/djbard/ccogs", - "rel": "/software/repository/github/djbard/ccogs", - "avatar": "https://avatars.githubusercontent.com/u/1790559?v=4", - "description": "Cosmological Calculations on GPUS. A collection of code used to perform calculations use in Cosmology studies and written for GPUs. ", + "uid": "github/sgshulman/DGEM", + "url": "https://github.com/sgshulman/DGEM", + "rel": "/software/repository/github/sgshulman/DGEM", + "avatar": "https://avatars.githubusercontent.com/u/25725978?v=4", + "description": "A simple three-dimensional dust continuum radiative transfer code for method comparison", "topics": [] }, { - "uid": "github/danhey/maelstrom", - "url": "https://github.com/danhey/maelstrom", - "rel": "/software/repository/github/danhey/maelstrom", - "avatar": "https://avatars0.githubusercontent.com/u/38233719?v=4", - "description": "Forward modelling of pulsating stars in binaries", + "uid": "github/hombit/freddi", + "url": "https://github.com/hombit/freddi", + "rel": "/software/repository/github/hombit/freddi", + "avatar": "https://avatars.githubusercontent.com/u/1784493?v=4", + "description": "Compute FRED light curves of LMXBs outbursts", "topics": [ - "asteroseismology", - "mcmc", - "bayesian-inference", - "pymc3", - "astronomy", + "accretion-disks", "astrophysics", - "binaries" + "x-ray-binaries", + "fred", + "science", + "lmxb" ] }, { - "uid": "github/danhey/echelle", - "url": "https://github.com/danhey/echelle", - "rel": "/software/repository/github/danhey/echelle", - "avatar": "https://avatars.githubusercontent.com/u/38233719?v=4", - "description": "Dynamic echelle diagrams for asteroseismology", - "topics": [] - }, - { - "uid": "github/michalychforever/CLASS-PT", - "url": "https://github.com/Michalychforever/CLASS-PT", - "rel": "/software/repository/github/michalychforever/CLASS-PT", - "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", - "description": "Nonlinear perturbation theory extension of the Boltzmann code CLASS", + "uid": "github/eggplantbren/RJObject", + "url": "https://github.com/eggplantbren/RJObject", + "rel": "/software/repository/github/eggplantbren/RJObject", + "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", + "description": "General code for birth/death stuff within DNest3", "topics": [] }, { - "uid": "github/LoganAMorrison/Hazma", - "url": "https://github.com/LoganAMorrison/Hazma", - "rel": "/software/repository/github/LoganAMorrison/Hazma", - "avatar": "https://avatars.githubusercontent.com/u/22247102?v=4", - "description": "Python package for computing indirect detection constraints on sub-GeV dark matter.", - "topics": [ - "physics", - "quantum-field-theory", - "astrophysics", - "python" - ] - }, - { - "uid": "github/LoganAMorrison/blackthorn", - "url": "https://github.com/LoganAMorrison/blackthorn", - "rel": "/software/repository/github/LoganAMorrison/blackthorn", - "avatar": "https://avatars.githubusercontent.com/u/22247102?v=4", - "description": "Project for computing spectra from right-handed neutrino decays", + "uid": "github/eggplantbren/DNest3", + "url": "https://github.com/eggplantbren/DNest3", + "rel": "/software/repository/github/eggplantbren/DNest3", + "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", + "description": "Diffusive Nested Sampling", "topics": [] }, { - "uid": "github/online-behaviour/find-journalists", - "url": "https://github.com/online-behaviour/find-journalists", - "rel": "/software/repository/github/online-behaviour/find-journalists", - "avatar": "https://avatars3.githubusercontent.com/u/26790167?v=4", - "description": null, + "uid": "github/eggplantbren/Exoplanet", + "url": "https://github.com/eggplantbren/Exoplanet", + "rel": "/software/repository/github/eggplantbren/Exoplanet", + "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", + "description": "Exoplanet stuff with RJObject and lookup tables", "topics": [] }, { - "uid": "github/online-behaviour/machine-learning", - "url": "https://github.com/online-behaviour/machine-learning", - "rel": "/software/repository/github/online-behaviour/machine-learning", - "avatar": "https://avatars3.githubusercontent.com/u/26790167?v=4", - "description": "Python scripts for tweet retrieval and machine learning in the eScience project Automated Analysis of Online Behaviour on Social Media", + "uid": "github/eggplantbren/RMHB", + "url": "https://github.com/eggplantbren/RMHB", + "rel": "/software/repository/github/eggplantbren/RMHB", + "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", + "description": "Source code for 'hierarchical reverberation mapping'", "topics": [] - }, - { - "uid": "github/yymao/abundancematching", - "url": "https://github.com/yymao/abundancematching", - "rel": "/software/repository/github/yymao/abundancematching", - "avatar": "https://avatars.githubusercontent.com/u/3792659?v=4", - "description": "A Python package for subhalo abundance matching (SHAM) with scatter.", - "topics": [ - "subhalo-abundance-matching", - "abundance-matching", - "python", - "deconvolution", - "astrophysics" - ] - }, - { - "uid": "github/yymao/adstex", - "url": "https://github.com/yymao/adstex", - "rel": "/software/repository/github/yymao/adstex", - "avatar": "https://avatars.githubusercontent.com/u/3792659?v=4", - "description": "Automated generation of NASA ADS bibtex entries directly from citation keys in your TeX source files", + }, + { + "uid": "github/eggplantbren/DNest4", + "url": "https://github.com/eggplantbren/DNest4", + "rel": "/software/repository/github/eggplantbren/DNest4", + "avatar": "https://avatars.githubusercontent.com/u/1578298?v=4", + "description": "Diffusive Nested Sampling", "topics": [ - "latex", - "astronomy", - "bibliography", - "bibtex-files", - "nasa-ads", - "python" + "bayesian-inference", + "markov-chain-monte-carlo", + "nested-sampling", + "probability", + "probabilistic-programming" ] }, { - "uid": "github/bauer-alex/fuzzyclara", - "url": "https://github.com/bauer-alex/fuzzyclara", - "rel": "/software/repository/github/bauer-alex/fuzzyclara", - "avatar": "https://avatars.githubusercontent.com/u/20172676?v=4", - "description": "Efficient medoid-based clustering algorithms for large and fuzzy data", + "uid": "github/yanliang-astro/aestra", + "url": "https://github.com/yanliang-astro/aestra", + "rel": "/software/repository/github/yanliang-astro/aestra", + "avatar": "https://avatars.githubusercontent.com/u/71669502?v=4", + "description": "AESTRA (Auto-Encoding STellar Radial-velocity and Activity) is a deep learning method for precise radial velocity measurements in the presence of stellar activity noise. ", "topics": [] }, { - "uid": "github/napakalas/casbert", - "url": "https://github.com/napakalas/casbert", - "rel": "/software/repository/github/napakalas/casbert", - "avatar": "https://avatars.githubusercontent.com/u/3060947?v=4", - "description": null, - "topics": [] + "uid": "github/mathopt/DynamicOED.jl", + "url": "https://github.com/mathopt/DynamicOED.jl", + "rel": "/software/repository/github/mathopt/DynamicOED.jl", + "avatar": "https://avatars.githubusercontent.com/u/98813390?v=4", + "description": "Optimal experimental design of ODE and DAE systems in julia", + "topics": [ + "mixed-integer-programming", + "optimal-control", + "optimal-experimental-design", + "sciml" + ] }, { - "uid": "github/eaobservatory/jcmt_coadd", - "url": "https://github.com/eaobservatory/jcmt_coadd", - "rel": "/software/repository/github/eaobservatory/jcmt_coadd", - "avatar": "https://avatars.githubusercontent.com/u/2035640?v=4", - "description": "UKT14 photometry data reduction tool", + "uid": "github/pezmaster31/bamtools", + "url": "https://github.com/pezmaster31/bamtools", + "rel": "/software/repository/github/pezmaster31/bamtools", + "avatar": "https://avatars.githubusercontent.com/u/282978?v=4", + "description": "C++ API & command-line toolkit for working with BAM data", "topics": [] }, { - "uid": "github/bcgov/bcdata", - "url": "https://github.com/bcgov/bcdata", - "rel": "/software/repository/github/bcgov/bcdata", - "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", - "description": "An R package for searching & retrieving data from the B.C. Data Catalogue", + "uid": "github/kutaslab/fitgrid", + "url": "https://github.com/kutaslab/fitgrid", + "rel": "/software/repository/github/kutaslab/fitgrid", + "avatar": "https://avatars.githubusercontent.com/u/39499147?v=4", + "description": "Multichannel event-related time-series regression modeling for EEG, MEG, and sensor array data", "topics": [ - "env", - "rstats", - "r", - "data-science", - "r-package", - "citz", - "bcdc" + "python", + "eeg", + "regression" ] }, { - "uid": "github/bcgov/shinyssdtools", - "url": "https://github.com/bcgov/shinyssdtools", - "rel": "/software/repository/github/bcgov/shinyssdtools", - "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", - "description": "Shiny interface to ssdtools R package", + "uid": "github/gear-genomics/dicey", + "url": "https://github.com/gear-genomics/dicey", + "rel": "/software/repository/github/gear-genomics/dicey", + "avatar": "https://avatars.githubusercontent.com/u/31348883?v=4", + "description": "In-silico PCR, primer design and padlock design for in-situ sequencing", "topics": [ - "ssd", - "env", - "species-sensitivity-distribution", - "water-quality-guideline" + "gear-genomics", + "pcr", + "primer", + "primer-design", + "in-silico", + "sanger-sequencing", + "amplicon", + "amplicon-sequencing", + "padlock", + "in-situ-sequencing" ] }, { - "uid": "github/bcgov/ssdtools", - "url": "https://github.com/bcgov/ssdtools", - "rel": "/software/repository/github/bcgov/ssdtools", - "avatar": "https://avatars.githubusercontent.com/u/916280?v=4", - "description": "An R package to fit and plot Species Sensitivity Distributions (SSDs)", + "uid": "github/gear-genomics/tracy", + "url": "https://github.com/gear-genomics/tracy", + "rel": "/software/repository/github/gear-genomics/tracy", + "avatar": "https://avatars.githubusercontent.com/u/31348883?v=4", + "description": "Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files", "topics": [ - "rstats", - "ecotoxicology", - "species-sensitivity-distribution", - "env" + "chromatogram", + "pcr", + "tracy", + "sanger-trace-alignment", + "sanger-sequencing", + "sequencing", + "variant-calling", + "alignment", + "genetic-engineering", + "pcr-products", + "crispr-cas9", + "crispr-analysis", + "indel", + "indel-discovery", + "sanger-chromatograms" ] }, { - "uid": "github/danielacarrasco/GLACiAR", - "url": "https://github.com/danielacarrasco/GLACiAR", - "rel": "/software/repository/github/danielacarrasco/GLACiAR", - "avatar": "https://avatars.githubusercontent.com/u/17707372?v=4", - "description": "GLACiAR (GaLAxy survey Completeness AlgoRithm) is an open-source python tool for simulations of source recovery and completeness in galaxy surveys.", + "uid": "github/apaolillo/pythainer", + "url": "https://github.com/apaolillo/pythainer", + "rel": "/software/repository/github/apaolillo/pythainer", + "avatar": "https://avatars.githubusercontent.com/u/4931290?v=4", + "description": "A pythonic toolkit for composing, managing, and deploying Docker images and containers.", "topics": [] }, { - "uid": "github/Autostronomy/AstroPhot", - "url": "https://github.com/Autostronomy/AstroPhot", - "rel": "/software/repository/github/Autostronomy/AstroPhot", - "avatar": "https://avatars.githubusercontent.com/u/136352278?v=4", - "description": "A fast, flexible, automated, and differentiable astronomical image modelling tool for precise parallel multi-wavelength photometry", - "topics": [ - "astronomy", - "python", - "pytorch", - "scientific-computing", - "science-research" - ] + "uid": "github/gsuissa/hardCORE", + "url": "https://github.com/gsuissa/hardCORE", + "rel": "/software/repository/github/gsuissa/hardCORE", + "avatar": "https://avatars.githubusercontent.com/u/31299942?v=4", + "description": null, + "topics": [] }, { - "uid": "github/drwaseemsheikh/audiometry", - "url": "https://github.com/drwaseemsheikh/audiometry", - "rel": "/software/repository/github/drwaseemsheikh/audiometry", - "avatar": "https://avatars1.githubusercontent.com/u/56233110?v=4", - "description": "Audiometry is an application framework written in C# and based on WPF and .NET that enables accurate digital recording, search, analysis, graphical visualization, and reproduction of human audio-vestibular impairment test data to assist in hearing loss or disability diagnosis.", + "uid": "github/DrJieZheng/meanoffset", + "url": "https://github.com/DrJieZheng/meanoffset", + "rel": "/software/repository/github/DrJieZheng/meanoffset", + "avatar": "https://avatars.githubusercontent.com/u/168158969?v=4", + "description": null, "topics": [] }, { - "uid": "github/collinlewin/STELA-Toolkit", - "url": "https://github.com/collinlewin/STELA-Toolkit", - "rel": "/software/repository/github/collinlewin/STELA-Toolkit", - "avatar": "https://avatars.githubusercontent.com/u/28280691?v=4", - "description": "A Python package for interpolating astrophysical light curves using Gaussian Processes (more ML models to come!) in order to compute frequency-domain and standard time domain data products.", + "uid": "github/LTLA/gesel.js", + "url": "https://github.com/LTLA/gesel.js", + "rel": "/software/repository/github/LTLA/gesel.js", + "avatar": "https://avatars.githubusercontent.com/u/8166669?v=4", + "description": "Client-side gene set queries.", "topics": [] }, { - "uid": "github/csiro-risk-assessment/mozzie", - "url": "https://github.com/csiro-risk-assessment/mozzie", - "rel": "/software/repository/github/csiro-risk-assessment/mozzie", - "avatar": "https://avatars.githubusercontent.com/u/180230676?v=4", - "description": "Mosquito lifecycle, diffusion and advection", + "uid": "github/LTLA/basilisk", + "url": "https://github.com/LTLA/basilisk", + "rel": "/software/repository/github/LTLA/basilisk", + "avatar": "https://avatars.githubusercontent.com/u/8166669?v=4", + "description": "Clone of the Bioconductor repository for the basilisk package.", "topics": [] }, { - "uid": "github/PennyLaneAI/catalyst", - "url": "https://github.com/PennyLaneAI/catalyst", - "rel": "/software/repository/github/PennyLaneAI/catalyst", - "avatar": "https://avatars.githubusercontent.com/u/64286425?v=4", - "description": "A JIT compiler for hybrid quantum programs in PennyLane", + "uid": "github/PyTorchLightning/metrics", + "url": "https://github.com/PyTorchLightning/metrics", + "rel": "/software/repository/github/PyTorchLightning/metrics", + "avatar": "https://avatars.githubusercontent.com/u/58386951?v=4", + "description": "Machine learning metrics for distributed, scalable PyTorch applications.", "topics": [ - "jit", - "mlir", - "qir", - "quantum-compiler", - "autodiff", - "automatic-differentiation", - "jax", - "llvm", "python", - "quantum", - "quantum-computing", - "pennylane" + "data-science", + "machine-learning", + "pytorch", + "deep-learning", + "metrics", + "analyses" ] }, { - "uid": "github/FrederickHuangLin/ANCOMBC", - "url": "https://github.com/FrederickHuangLin/ANCOMBC", - "rel": "/software/repository/github/FrederickHuangLin/ANCOMBC", - "avatar": "https://avatars.githubusercontent.com/u/7278887?v=4", - "description": "Differential abundance (DA) and correlation analyses for microbial absolute abundance data", + "uid": "github/SebastianBocquet/pygtc", + "url": "https://github.com/SebastianBocquet/pygtc", + "rel": "/software/repository/github/SebastianBocquet/pygtc", + "avatar": "https://avatars.githubusercontent.com/u/9337470?v=4", + "description": "Make a sweet giant triangle confusogram (GTC) plot", "topics": [ - "ancom", - "differential-abundance-analysis", - "microbiome", - "normalization", - "sequencing", - "correlation", - "secom", - "ancombc", - "ancombc2" + "mcmc", + "bayesian-data-analysis", + "data-visualization" ] }, { - "uid": "github/antonpannekoek/sunbather", - "url": "https://github.com/antonpannekoek/sunbather", - "rel": "/software/repository/github/antonpannekoek/sunbather", - "avatar": "https://avatars.githubusercontent.com/u/13951037?v=4", - "description": "Python/Cloudy package for simulating escaping exoplanet atmospheres and their transit spectra.", + "uid": "github/marseille-proteomique/DIAgui", + "url": "https://github.com/marseille-proteomique/DIAgui", + "rel": "/software/repository/github/marseille-proteomique/DIAgui", + "avatar": "https://avatars.githubusercontent.com/u/58274920?v=4", + "description": "An interactive shiny app for processing DIA-nn output (filtering, MaxLFQ, Top3, iBAQ, etc.)", "topics": [] }, { - "uid": "github/jbuisine/macop", - "url": "https://github.com/jbuisine/macop", - "rel": "/software/repository/github/jbuisine/macop", - "avatar": "https://avatars.githubusercontent.com/u/11876986?v=4", - "description": "Minimalist And Customisable Optimisation python Package", - "topics": [ - "algorithms", - "python", - "generic", - "optimisation", - "evolutionary-algorithms" - ] - }, - { - "uid": "github/alex-b-davis/gubas", - "url": "https://github.com/alex-b-davis/gubas", - "rel": "/software/repository/github/alex-b-davis/gubas", - "avatar": "https://avatars.githubusercontent.com/u/54447759?v=4", - "description": "General Use Binary Asteroid Simulator", + "uid": "github/stamatak/AxPcoords.dist", + "url": "https://github.com/stamatak/AxPcoords.dist", + "rel": "/software/repository/github/stamatak/AxPcoords.dist", + "avatar": "https://avatars.githubusercontent.com/u/880890?v=4", + "description": "AxPcoords implementation ", "topics": [] }, { - "uid": "github/rgcgithub/regenie", - "url": "https://github.com/rgcgithub/regenie", - "rel": "/software/repository/github/rgcgithub/regenie", - "avatar": "https://avatars.githubusercontent.com/u/14313709?v=4", - "description": "regenie is a C++ program for whole genome regression modelling of large genome-wide association studies.", + "uid": "github/stamatak/ExaML", + "url": "https://github.com/stamatak/ExaML", + "rel": "/software/repository/github/stamatak/ExaML", + "avatar": "https://avatars.githubusercontent.com/u/880890?v=4", + "description": "Exascale Maximum Likelihood (ExaML) code for phylogenetic inference using MPI", "topics": [] }, { - "uid": "github/castro-gzlz/TESS-cont", - "url": "https://github.com/castro-gzlz/TESS-cont", - "rel": "/software/repository/github/castro-gzlz/TESS-cont", - "avatar": "https://avatars.githubusercontent.com/u/132309889?v=4", - "description": "Flux contamination analysis (TESS)", + "uid": "github/HofstadterTools/HofstadterTools", + "url": "https://github.com/HofstadterTools/HofstadterTools", + "rel": "/software/repository/github/HofstadterTools/HofstadterTools", + "avatar": "https://avatars.githubusercontent.com/u/146359056?v=4", + "description": "A Python package for analyzing the Hofstadter model.", "topics": [ - "exoplanet-detection", - "exoplanets", - "tess", - "contamination", - "tess-photometry" + "band-theory", + "condensed-matter-physics", + "electromagnetism", + "fractals", + "mathematical-physics", + "quantum-hall-effect", + "quantum-physics", + "theoretical-physics", + "topological-materials", + "topological-order" ] }, { - "uid": "github/castro-gzlz/mr-plotter", - "url": "https://github.com/castro-gzlz/mr-plotter", - "rel": "/software/repository/github/castro-gzlz/mr-plotter", - "avatar": "https://avatars.githubusercontent.com/u/132309889?v=4", - "description": "Mass-Radius diagrams with a wide range of models and relationships", + "uid": "github/PabloMSanAla/fabada", + "url": "https://github.com/PabloMSanAla/fabada", + "rel": "/software/repository/github/PabloMSanAla/fabada", + "avatar": "https://avatars.githubusercontent.com/u/48026860?v=4", + "description": "Fully Adaptive Bayesian Algorithm for Data Analysis (FABADA) is a new approach of noise reduction methods. In this repository is shown the package developed for this new method based on \\citepaper.", "topics": [ - "exoplanets", - "exoplanet-composition", - "exoplanet-interiors", - "exoplanet-atmospheres" + "python", + "noise-reduction", + "astronomy" ] }, { - "uid": "github/JungleComputing/rocket", - "url": "https://github.com/JungleComputing/rocket", - "rel": "/software/repository/github/JungleComputing/rocket", - "avatar": "https://avatars.githubusercontent.com/u/34010042?v=4", - "description": "Rocket is a Constellation-based runtime system for efficient execution of all-pair compute problem on distributed heterogeneous platforms", + "uid": "github/ejeschke/ginga", + "url": "https://github.com/ejeschke/ginga", + "rel": "/software/repository/github/ejeschke/ginga", + "avatar": "https://avatars.githubusercontent.com/u/1305473?v=4", + "description": "The Ginga astronomical FITS file viewer", "topics": [] }, { - "uid": "github/UTEL-UIUC/gtfs_segments", - "url": "https://github.com/UTEL-UIUC/gtfs_segments", - "rel": "/software/repository/github/UTEL-UIUC/gtfs_segments", - "avatar": "https://avatars.githubusercontent.com/u/90534722?v=4", - "description": "GTFS Segments: A fast and efficient library to generate bus stop spacings", + "uid": "github/hishamhm/htop", + "url": "https://github.com/hishamhm/htop", + "rel": "/software/repository/github/hishamhm/htop", + "avatar": "https://avatars.githubusercontent.com/u/245621?v=4", + "description": "htop is an interactive text-mode process viewer for Unix systems. It aims to be a better 'top'.", "topics": [ - "bus", - "stop", - "distribution", - "gtfs-feed", - "python", - "transit", - "transit-data" + "c", + "terminal", + "process-monitor", + "htop", + "tui", + "system", + "console", + "console-application", + "linux", + "freebsd", + "openbsd", + "macos" ] }, { - "uid": "github/SoSongzhi/PVGA", - "url": "https://github.com/SoSongzhi/PVGA", - "rel": "/software/repository/github/SoSongzhi/PVGA", - "avatar": "https://avatars.githubusercontent.com/u/74604653?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/ebachelet/pyLIMA", - "url": "https://github.com/ebachelet/pyLIMA", - "rel": "/software/repository/github/ebachelet/pyLIMA", - "avatar": "https://avatars.githubusercontent.com/u/14871821?v=4", + "uid": "github/UrbanRuralSystems/ur-scape", + "url": "https://github.com/UrbanRuralSystems/ur-scape", + "rel": "/software/repository/github/UrbanRuralSystems/ur-scape", + "avatar": "https://avatars.githubusercontent.com/u/40052507?v=4", "description": null, "topics": [] }, { - "uid": "github/OSS-Lab/ChemChaste", - "url": "https://github.com/OSS-Lab/ChemChaste", - "rel": "/software/repository/github/OSS-Lab/ChemChaste", - "avatar": "https://avatars.githubusercontent.com/u/7525127?v=4", + "uid": "github/eabaron/synow", + "url": "https://github.com/eabaron/synow", + "rel": "/software/repository/github/eabaron/synow", + "avatar": "https://avatars.githubusercontent.com/u/12874798?v=4", "description": null, "topics": [] }, { - "uid": "github/fredstro/hilbertmodgroup", - "url": "https://github.com/fredstro/hilbertmodgroup", - "rel": "/software/repository/github/fredstro/hilbertmodgroup", - "avatar": "https://avatars.githubusercontent.com/u/1598083?v=4", - "description": "Implementation of Hilbert modular groups using SageMath", + "uid": "github/citiususc/veryfasttree", + "url": "https://github.com/citiususc/veryfasttree", + "rel": "/software/repository/github/citiususc/veryfasttree", + "avatar": "https://avatars.githubusercontent.com/u/5822373?v=4", + "description": "Speeding up the estimation of phylogenetic trees for large alignments through parallelization and vectorization strategies", "topics": [] }, { - "uid": "github/mjacob1002/Eir", - "url": "https://github.com/mjacob1002/Eir", - "rel": "/software/repository/github/mjacob1002/Eir", - "avatar": "https://avatars.githubusercontent.com/u/63362973?v=4", - "description": "Eir is a package that helps researchers simulate the spread of epidemics, mainly focusing on discrete-time Markovian spatial models. ", + "uid": "github/citiususc/BigSeqKit", + "url": "https://github.com/citiususc/BigSeqKit", + "rel": "/software/repository/github/citiususc/BigSeqKit", + "avatar": "https://avatars.githubusercontent.com/u/5822373?v=4", + "description": "BigSeqKit: a parallel Big Data toolkit to process FASTA and FASTQ files at scale", "topics": [] }, { - "uid": "github/grburgess/ronswanson", - "url": "https://github.com/grburgess/ronswanson", - "rel": "/software/repository/github/grburgess/ronswanson", - "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", - "description": "Ron Swanson builds tables for 3ML", + "uid": "github/BradhamLab/icat", + "url": "https://github.com/BradhamLab/icat", + "rel": "/software/repository/github/BradhamLab/icat", + "avatar": "https://avatars.githubusercontent.com/u/39013433?v=4", + "description": "Identifying Cell-states Across Treatments", "topics": [ - "3ml", - "astromodels", - "data-analysis", - "interpolation", - "python", - "ron-swanson", - "spectral-fitting" + "clustering", + "machine-learning", + "self-supervised-learning", + "semi-supervised-learning", + "single-cell", + "single-cell-analysis", + "single-cell-rna-seq" ] }, { - "uid": "github/grburgess/pynchrotron", - "url": "https://github.com/grburgess/pynchrotron", - "rel": "/software/repository/github/grburgess/pynchrotron", - "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", - "description": "Implements synchrotron emission from cooling electrons", - "topics": [ - "gamma-ray-astronomy", - "synchrotron", - "chang-cooper", - "electrons", - "grb", - "numerics", - "threeml", - "astromodels" - ] + "uid": "github/ggmichael/craterstats", + "url": "https://github.com/ggmichael/craterstats", + "rel": "/software/repository/github/ggmichael/craterstats", + "avatar": "https://avatars.githubusercontent.com/u/75208810?v=4", + "description": "Craterstats - a tool to analyse and plot crater count data for planetary surface dating", + "topics": [] }, { - "uid": "github/grburgess/nazgul", - "url": "https://github.com/grburgess/nazgul", - "rel": "/software/repository/github/grburgess/nazgul", - "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", - "description": "GRB triangulation via non-stationary time-series models", + "uid": "github/migp11/pyfastcore", + "url": "https://github.com/migp11/pyfastcore", + "rel": "/software/repository/github/migp11/pyfastcore", + "avatar": "https://avatars.githubusercontent.com/u/6224685?v=4", + "description": "A python implementation of the context-specific model extraction method FastCore by Vlassis et al. (2014).", + "topics": [] + }, + { + "uid": "github/HLasse/TextDescriptives", + "url": "https://github.com/HLasse/TextDescriptives", + "rel": "/software/repository/github/HLasse/TextDescriptives", + "avatar": "https://avatars.githubusercontent.com/u/23191638?v=4", + "description": "A Python library for calculating a large variety of metrics from text", "topics": [ - "grb", - "localization", - "random-fourier-features", - "non-parametric-inference", - "time-series-analysis", - "stan", - "fermi" + "nlp", + "python", + "statistics", + "syntactic-analysis", + "readability", + "readability-scores", + "descriptive-statistics", + "spacy", + "spacy-extension", + "dependency-distance" ] }, { - "uid": "github/grburgess/polarpy", - "url": "https://github.com/grburgess/polarpy", - "rel": "/software/repository/github/grburgess/polarpy", - "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", - "description": "Tools for polar", + "uid": "github/zblz/naima", + "url": "https://github.com/zblz/naima", + "rel": "/software/repository/github/zblz/naima", + "avatar": "https://avatars.githubusercontent.com/u/576258?v=4", + "description": "Derivation of non-thermal particle distributions through MCMC spectral fitting", "topics": [ - "polarization", - "polarization-data", - "grb", + "astronomy", + "astrophysics", + "python", "data-analysis", - "3ml" + "gamma-ray-astronomy" ] }, { - "uid": "github/grburgess/popsynth", - "url": "https://github.com/grburgess/popsynth", - "rel": "/software/repository/github/grburgess/popsynth", - "avatar": "https://avatars.githubusercontent.com/u/6764007?v=4", - "description": "A generic flux/parameter population synthesis code", + "uid": "github/cogent3/cogent3", + "url": "https://github.com/cogent3/cogent3", + "rel": "/software/repository/github/cogent3/cogent3", + "avatar": "https://avatars.githubusercontent.com/u/55074560?v=4", + "description": "Comparative Genomics Toolkit 3", "topics": [ - "population", - "simulation", + "bioinformatics", + "pycogent", "statistics", - "population-synthesis", - "astrophysics", - "astronomy" + "data-science", + "biology", + "genomics", + "evolution", + "biopython", + "markov-chain", + "molecular-evolution", + "non-stationary", + "phylogenetic-trees", + "phylogenetics", + "python", + "parallel", + "signal-processing", + "maximum-likelihood", + "biological-sequence-analysis", + "sequence-alignment" ] }, { - "uid": "github/me-manu/gammaALPs", - "url": "https://github.com/me-manu/gammaALPs", - "rel": "/software/repository/github/me-manu/gammaALPs", - "avatar": "https://avatars.githubusercontent.com/u/1806684?v=4", - "description": "A python code to calculate the conversion probability between photons and axions / axionlike particles", + "uid": "github/esoPanda/FTbg", + "url": "https://github.com/esoPanda/FTbg", + "rel": "/software/repository/github/esoPanda/FTbg", + "avatar": "https://avatars.githubusercontent.com/u/10759043?v=4", + "description": "Background removal using Fourier Transform", "topics": [] }, { - "uid": "github/UgoLomoio/gtex_visualizer", - "url": "https://github.com/UgoLomoio/gtex_visualizer", - "rel": "/software/repository/github/UgoLomoio/gtex_visualizer", - "avatar": "https://avatars.githubusercontent.com/u/87126937?v=4", - "description": null, + "uid": "github/ethz-randomwalk/polytopewalk", + "url": "https://github.com/ethz-randomwalk/polytopewalk", + "rel": "/software/repository/github/ethz-randomwalk/polytopewalk", + "avatar": "https://avatars.githubusercontent.com/u/169664313?v=4", + "description": "PolytopeWalk: fast sparse and dense random walks on polytope, with C++ backend and Python interface", "topics": [] }, { - "uid": "github/ryneches/SuchTree", - "url": "https://github.com/ryneches/SuchTree", - "rel": "/software/repository/github/ryneches/SuchTree", - "avatar": "https://avatars.githubusercontent.com/u/440383?v=4", - "description": "A Python library for fast, thread-safe computations on phylogenetic trees", + "uid": "github/Julian/jsonschema", + "url": "https://github.com/Julian/jsonschema", + "rel": "/software/repository/github/Julian/jsonschema", + "avatar": "https://avatars.githubusercontent.com/u/329822?v=4", + "description": "An(other) implementation of JSON Schema for Python", "topics": [] }, { - "uid": "github/xfcui/onn4arg", - "url": "https://github.com/xfcui/onn4arg", - "rel": "/software/repository/github/xfcui/onn4arg", - "avatar": "https://avatars.githubusercontent.com/u/25788176?v=4", - "description": null, - "topics": [] + "uid": "github/jbytecode/LinRegOutliers", + "url": "https://github.com/jbytecode/LinRegOutliers", + "rel": "/software/repository/github/jbytecode/LinRegOutliers", + "avatar": "https://avatars1.githubusercontent.com/u/8011702?v=4", + "description": "Direct and robust methods for outlier detection in linear regression", + "topics": [ + "outliers-detection", + "linear-regression", + "robust-statistics" + ] }, { - "uid": "github/lauralwatkins/cjam", - "url": "https://github.com/lauralwatkins/cjam", - "rel": "/software/repository/github/lauralwatkins/cjam", - "avatar": "https://avatars.githubusercontent.com/u/1694844?v=4", - "description": "CJAM : Jeans Anisotropic MGE modelling code written in C from Watkins et al. 2013, MNRAS, 436, 2598", + "uid": "github/jbytecode/JMcDM", + "url": "https://github.com/jbytecode/JMcDM", + "rel": "/software/repository/github/jbytecode/JMcDM", + "avatar": "https://avatars.githubusercontent.com/u/8011702?v=4", + "description": "A package for Multiple criteria decision-making techniques in Julia", "topics": [] }, { - "uid": "github/gevaertlab/DUNE", - "url": "https://github.com/gevaertlab/DUNE", - "rel": "/software/repository/github/gevaertlab/DUNE", - "avatar": "https://avatars.githubusercontent.com/u/37343740?v=4", - "description": "DUNE", - "topics": [] + "uid": "github/jbytecode/OperationsResearchModels.jl", + "url": "https://github.com/jbytecode/OperationsResearchModels.jl", + "rel": "/software/repository/github/jbytecode/OperationsResearchModels.jl", + "avatar": "https://avatars.githubusercontent.com/u/8011702?v=4", + "description": "A Julia package for operations research problems", + "topics": [ + "assignment-problem", + "maximum-flow", + "shortest-path", + "transportation-problem", + "cpm", + "johnson-algorithm", + "knapsack-problem", + "p-median-problem", + "pert", + "scheduling", + "minimum-spanning-tree" + ] }, { - "uid": "github/moustakas/iSEDfit", - "url": "https://github.com/moustakas/iSEDfit", - "rel": "/software/repository/github/moustakas/iSEDfit", - "avatar": "https://avatars.githubusercontent.com/u/1431820?v=4", - "description": "iSEDfit is a Bayesian spectral energy distribution fitting code designed to extract the physical properties of galaxies from broadband photometry.", - "topics": [] + "uid": "github/chemfiles/chemfiles", + "url": "https://github.com/chemfiles/chemfiles", + "rel": "/software/repository/github/chemfiles/chemfiles", + "avatar": "https://avatars.githubusercontent.com/u/15002707?v=4", + "description": "Library for reading and writing chemistry files", + "topics": [ + "computational-chemistry", + "library", + "files", + "compchem", + "cheminformatics", + "chemistry", + "hacktoberfest" + ] }, { - "uid": "github/ThomasMBury/ewstools", - "url": "https://github.com/ThomasMBury/ewstools", - "rel": "/software/repository/github/ThomasMBury/ewstools", - "avatar": "https://avatars.githubusercontent.com/u/36854425?v=4", - "description": "Python package for early warning signals (EWS) of bifurcations in time series data.", + "uid": "github/SatelliteShorelines/CoastSeg", + "url": "https://github.com/SatelliteShorelines/CoastSeg", + "rel": "/software/repository/github/SatelliteShorelines/CoastSeg", + "avatar": "https://avatars.githubusercontent.com/u/113170084?v=4", + "description": "An interactive toolbox for downloading satellite imagery, applying image segmentation models, mapping shoreline positions and more. The mapping extension for CoastSat and Zoo.", "topics": [ - "time-series", - "forecasting", - "early-warning-signals", - "early-warning-indicators", - "bifurcation", - "critical-transitions", - "resilience-indicators", - "tipping-point", - "autocorrelation", - "power-spectrum", - "bootstrapping", - "complex-systems", + "earth-engine", + "jupyter", "python", - "ipynb", - "visualization" + "landsat", + "colab" ] }, { - "uid": "github/manodeep/Corrfunc", - "url": "https://github.com/manodeep/Corrfunc", - "rel": "/software/repository/github/manodeep/Corrfunc", - "avatar": "https://avatars.githubusercontent.com/u/3004941?v=4", - "description": "\u26a1\ufe0f\u26a1\ufe0f\u26a1\ufe0fBlazing fast correlation functions on the CPU.", + "uid": "github/votca/xtp", + "url": "https://github.com/votca/xtp", + "rel": "/software/repository/github/votca/xtp", + "avatar": "https://avatars0.githubusercontent.com/u/4510560?v=4", + "description": "GW-BSE for excited state Quantum Chemistry in a Gaussian Orbital basis, electronic spectroscopy with QM/MM, charge and energy dynamics in complex molecular systems", "topics": [ - "astrophysics", - "galaxies", - "cosmology", - "large-scale-structure", - "pair-counting", - "intrinsics", - "python", - "c", - "openmp", - "simd", - "avx512", - "avx2", - "avx", - "sse42", - "correlation-functions" + "quantum-chemistry", + "gw-bse", + "quantum-classical", + "excited-states", + "multiscale-simulation", + "computational-physics", + "computational-chemistry" ] }, { - "uid": "github/manodeep/TesseRACt", - "url": "https://github.com/manodeep/TesseRACt", - "rel": "/software/repository/github/manodeep/TesseRACt", - "avatar": "https://avatars.githubusercontent.com/u/3004941?v=4", - "description": null, + "uid": "github/phipsonlab/propeller-paper-analysis", + "url": "https://github.com/phipsonlab/propeller-paper-analysis", + "rel": "/software/repository/github/phipsonlab/propeller-paper-analysis", + "avatar": "https://avatars.githubusercontent.com/u/103480133?v=4", + "description": "The website hosts the analysis and evaluation of different statistical methods for determining differences in cell type proportions in single cell RNA-seq data.", "topics": [] }, { - "uid": "github/haowenz/chromap", - "url": "https://github.com/haowenz/chromap", - "rel": "/software/repository/github/haowenz/chromap", - "avatar": "https://avatars.githubusercontent.com/u/7692599?v=4", - "description": "is an ultrafast method for aligning and preprocessing high throughput chromatin profiles.", + "uid": "github/brentp/somalier", + "url": "https://github.com/brentp/somalier", + "rel": "/software/repository/github/brentp/somalier", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... \"like damn that is one smart wine guy\"", "topics": [ + "cancer-genomics", "bioinformatics", - "sequence-analysis", - "genomics", - "chromatin-profiles" + "genomics" ] }, { - "uid": "github/gwastro/pycbc", - "url": "https://github.com/gwastro/pycbc", - "rel": "/software/repository/github/gwastro/pycbc", - "avatar": "https://avatars.githubusercontent.com/u/11262917?v=4", - "description": "Core package to analyze gravitational-wave data, find signals, and study their parameters. This package was used in the first direct detection of gravitational waves (GW150914), and is used in the ongoing analysis of LIGO/Virgo data. ", + "uid": "github/brentp/goleft", + "url": "https://github.com/brentp/goleft", + "rel": "/software/repository/github/brentp/goleft", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary", "topics": [ - "astronomy", - "physics", - "gravity", - "ligo", - "gravitational-waves", - "pycbc", - "analysis", - "python", - "black-hole", - "neutron-star", - "gwastro", - "virgo", - "signal-processing", - "open-science", - "cosmic-explorer", - "einstein-telescope", - "lisa" + "genomics", + "bioinformatics", + "coverage", + "golang", + "depth" ] }, { - "uid": "github/wmglab-duke/ascent", - "url": "https://github.com/wmglab-duke/ascent", - "rel": "/software/repository/github/wmglab-duke/ascent", - "avatar": "https://avatars.githubusercontent.com/u/86266914?v=4", - "description": "ASCENT (Automated Simulations to Characterize Electrical Nerve Thresholds): A pipeline for sample-specific computational modeling of electrical stimulation of peripheral nerves", - "topics": [] - }, - { - "uid": "github/forrest-lab/scMatch", - "url": "https://github.com/forrest-lab/scMatch", - "rel": "/software/repository/github/forrest-lab/scMatch", - "avatar": "https://avatars.githubusercontent.com/u/12759531?v=4", - "description": "scMatch: a single-cell gene expression profile annotation tool using reference datasets", - "topics": [] - }, - { - "uid": "github/bmoster/emerge", - "url": "https://github.com/bmoster/emerge", - "rel": "/software/repository/github/bmoster/emerge", - "avatar": "https://avatars.githubusercontent.com/u/53537956?v=4", - "description": "Emerge - the smooth empirical model for galaxy formation", + "uid": "github/brentp/kexpr-nim", + "url": "https://github.com/brentp/kexpr-nim", + "rel": "/software/repository/github/brentp/kexpr-nim", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "nim wrapper for Heng Li's kexpr math expression evaluator library", "topics": [ - "cosmology", - "dark-matter", - "galaxy-formation" + "nim-lang", + "math-expressions", + "math", + "evaluator" ] }, { - "uid": "github/Michalychforever/CLASS_LVDM", - "url": "https://github.com/Michalychforever/CLASS_LVDM", - "rel": "/software/repository/github/Michalychforever/CLASS_LVDM", - "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", - "description": "CLASS extension that incorporates a model with Lorentz invariance violation in gravity and dark matter", - "topics": [] - }, - { - "uid": "github/Michalychforever/AsPy", - "url": "https://github.com/Michalychforever/AsPy", - "rel": "/software/repository/github/Michalychforever/AsPy", - "avatar": "https://avatars.githubusercontent.com/u/25805568?v=4", - "description": "Code to compute the determinant of aspherical fluctuations in spherical collapse background", + "uid": "github/brentp/cigar", + "url": "https://github.com/brentp/cigar", + "rel": "/software/repository/github/brentp/cigar", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "simple library for dealing with SAM cigar strings", "topics": [] }, { - "uid": "github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", - "url": "https://github.com/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", - "rel": "/software/repository/github/haile493/Colorectal-cancer-detection-using-ColoPola-dataset", - "avatar": "https://avatars.githubusercontent.com/u/26425008?v=4", - "description": null, + "uid": "github/brentp/gsort", + "url": "https://github.com/brentp/gsort", + "rel": "/software/repository/github/brentp/gsort", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "sort genomic data", "topics": [] }, { - "uid": "github/gvilitechltd/LibSWIFFT", - "url": "https://github.com/gvilitechltd/LibSWIFFT", - "rel": "/software/repository/github/gvilitechltd/LibSWIFFT", - "avatar": "https://avatars.githubusercontent.com/u/72996922?v=4", - "description": "LibSWIFFT - A fast C/C++ library for the SWIFFT secure homomorphic hash function", + "uid": "github/brentp/hts-nim-tools", + "url": "https://github.com/brentp/hts-nim-tools", + "rel": "/software/repository/github/brentp/hts-nim-tools", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "useful command-line tools written to showcase hts-nim", "topics": [ - "cryptography", - "lattice-based-crypto", - "secure-hashing", - "hash-functions", - "homomorphic", - "c", - "cpp", - "cpp11", - "c-plus-plus", - "c-plus-plus-11", - "swifft" + "genomics", + "bioinformatics", + "nim", + "nim-lang", + "bam", + "vcf", + "vcf-filtering" ] }, { - "uid": "github/Ompha/CLUES", - "url": "https://github.com/Ompha/CLUES", - "rel": "/software/repository/github/Ompha/CLUES", - "avatar": "https://avatars.githubusercontent.com/u/12269235?v=4", - "description": "CLustering UnsupErvised with Sequencer: A fully interpretable clustering tool for analyzing spectral data ", - "topics": [] + "uid": "github/brentp/vcfanno", + "url": "https://github.com/brentp/vcfanno", + "rel": "/software/repository/github/brentp/vcfanno", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "annotate a VCF with other VCFs/BEDs/tabixed files ", + "topics": [ + "bioinformatics", + "vcf", + "annotation", + "genomics" + ] }, { - "uid": "github/storyofthewolf/ExoRT", - "url": "https://github.com/storyofthewolf/ExoRT", - "rel": "/software/repository/github/storyofthewolf/ExoRT", - "avatar": "https://avatars.githubusercontent.com/u/19943455?v=4", - "description": "radiative transfer code, designed for use with CESM/CAM", - "topics": [] + "uid": "github/brentp/smoove", + "url": "https://github.com/brentp/smoove", + "rel": "/software/repository/github/brentp/smoove", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "structural variant calling and genotyping with existing tools, but, smoothly.", + "topics": [ + "structural-variation", + "genomics", + "lumpy" + ] }, { - "uid": "github/storyofthewolf/ExoCAM", - "url": "https://github.com/storyofthewolf/ExoCAM", - "rel": "/software/repository/github/storyofthewolf/ExoCAM", - "avatar": "https://avatars.githubusercontent.com/u/19943455?v=4", - "description": null, + "uid": "github/brentp/geneimpacts", + "url": "https://github.com/brentp/geneimpacts", + "rel": "/software/repository/github/brentp/geneimpacts", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "prioritize effects of variant annotations from VEP, SnpEff, et al.", "topics": [] }, { - "uid": "github/VSPEC-collab/VSPEC", - "url": "https://github.com/VSPEC-collab/VSPEC", - "rel": "/software/repository/github/VSPEC-collab/VSPEC", - "avatar": "https://avatars.githubusercontent.com/u/126274339?v=4", - "description": "Variable Star PhasE Curve: A Python tool that uses the NASA Planetary Spectrum Generator (PSG) and a variable star model to simulate observations of exoplanets.", + "uid": "github/brentp/cyvcf2", + "url": "https://github.com/brentp/cyvcf2", + "rel": "/software/repository/github/brentp/cyvcf2", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "a cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files.", "topics": [ - "exoplanet" + "vcf", + "htslib", + "cython", + "genomics", + "bioinformatics" ] }, { - "uid": "github/Crick-CancerGenomics/ascat", - "url": "https://github.com/VanLoo-lab/ascat", - "rel": "/software/repository/github/Crick-CancerGenomics/ascat", - "avatar": "https://avatars.githubusercontent.com/u/11769973?v=4", - "description": "ASCAT copy number R package", - "topics": [] - }, - { - "uid": "github/justyncw/STAR_MELT", - "url": "https://github.com/justyncw/STAR_MELT", - "rel": "/software/repository/github/justyncw/STAR_MELT", - "avatar": "https://avatars.githubusercontent.com/u/19569135?v=4", - "description": "Repository for the STAR-MELT emission line analysis Jupyter notebook and Python package", - "topics": [] + "uid": "github/brentp/nim-lapper", + "url": "https://github.com/brentp/nim-lapper", + "rel": "/software/repository/github/brentp/nim-lapper", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "fast easy interval overlapping for nim-lang", + "topics": [ + "nim-lang", + "interval", + "search", + "nim", + "overlap" + ] }, { - "uid": "github/nnssa/gallumi_public", - "url": "https://github.com/NNSSA/GALLUMI_public", - "rel": "/software/repository/github/nnssa/gallumi_public", - "avatar": "https://avatars.githubusercontent.com/u/33321316?v=4", - "description": "A Galaxy Luminosity Function Pipeline for Cosmology and Astrophysics", - "topics": [] + "uid": "github/brentp/peddy", + "url": "https://github.com/brentp/peddy", + "rel": "/software/repository/github/brentp/peddy", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF", + "topics": [ + "genomics", + "vcf", + "bioinformatics", + "pedigree", + "genotype", + "ancestry" + ] }, { - "uid": "github/stinefm/relsad", - "url": "https://github.com/stinefm/relsad", - "rel": "/software/repository/github/stinefm/relsad", - "avatar": "https://avatars.githubusercontent.com/u/61108213?v=4", - "description": "A Python package for reliability assessment of modern distribution systems.", + "uid": "github/brentp/mosdepth", + "url": "https://github.com/brentp/mosdepth", + "rel": "/software/repository/github/brentp/mosdepth", + "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", + "description": "fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing", "topics": [ - "electrical-power-engineering", - "reliability" + "coverage", + "genome", + "depth", + "exome", + "wgs", + "sequencing", + "nim", + "nim-lang", + "hacktoberfest" ] }, { - "uid": "github/autotwin/automesh", - "url": "https://github.com/autotwin/automesh", - "rel": "/software/repository/github/autotwin/automesh", - "avatar": "https://avatars.githubusercontent.com/u/110108019?v=4", - "description": "Automatic mesh generation.", + "uid": "github/swiftbiosciences/primerclip", + "url": "https://github.com/swiftbiosciences/primerclip", + "rel": "/software/repository/github/swiftbiosciences/primerclip", + "avatar": "https://avatars.githubusercontent.com/u/34242556?v=4", + "description": "Swift Accel-Amplicon primer trimming tool for fast alignment-based primer trimming", "topics": [] }, { - "uid": "github/astronomical-data-processing/RAPP", - "url": "https://github.com/astronomical-data-processing/RAPP", - "rel": "/software/repository/github/astronomical-data-processing/RAPP", - "avatar": "https://avatars.githubusercontent.com/u/47811859?v=4", - "description": null, + "uid": "github/big-data-lab-team/spot", + "url": "https://github.com/big-data-lab-team/spot", + "rel": "/software/repository/github/big-data-lab-team/spot", + "avatar": "https://avatars0.githubusercontent.com/u/22078250?v=4", + "description": "A set of tools to evaluate the reproducibility of computations", "topics": [] }, { - "uid": "github/davidaknowles/leafcutter", - "url": "https://github.com/davidaknowles/leafcutter", - "rel": "/software/repository/github/davidaknowles/leafcutter", - "avatar": "https://avatars.githubusercontent.com/u/4521734?v=4", - "description": "Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae Kyung Im, Jonathan K. Pritchard", + "uid": "github/percolator/percolator", + "url": "https://github.com/percolator/percolator", + "rel": "/software/repository/github/percolator/percolator", + "avatar": "https://avatars.githubusercontent.com/u/95488?v=4", + "description": "Semi-supervised learning for peptide identification from shotgun proteomics datasets ", "topics": [] }, { - "uid": "github/anwarbio/bioassays", - "url": "https://github.com/anwarbio/bioassays", - "rel": "/software/repository/github/anwarbio/bioassays", - "avatar": "https://avatars3.githubusercontent.com/u/7861503?v=4", + "uid": "github/QingyuLiaib/PLA-MoRe", + "url": "https://github.com/QingyuLiaib/PLA-MoRe", + "rel": "/software/repository/github/QingyuLiaib/PLA-MoRe", + "avatar": "https://avatars.githubusercontent.com/u/48451498?v=4", "description": null, "topics": [] }, { - "uid": "github/IanevskiAleksandr/sc-type", - "url": "https://github.com/IanevskiAleksandr/sc-type", - "rel": "/software/repository/github/IanevskiAleksandr/sc-type", - "avatar": "https://avatars.githubusercontent.com/u/22654591?v=4", - "description": null, + "uid": "github/atzberg/mlmod", + "url": "https://github.com/atzberg/mlmod", + "rel": "/software/repository/github/atzberg/mlmod", + "avatar": "https://avatars.githubusercontent.com/u/8550758?v=4", + "description": "Machine learning package for data-driven modeling and simulation in LAMMPs.", + "topics": [ + "data-science", + "machine-learning", + "scientific-computation", + "simulations" + ] + }, + { + "uid": "github/huishenlab/biscuit", + "url": "https://github.com/huishenlab/biscuit", + "rel": "/software/repository/github/huishenlab/biscuit", + "avatar": "https://avatars.githubusercontent.com/u/57234878?v=4", + "description": "BISulfite-seq CUI Toolkit", "topics": [] }, { - "uid": "github/coccoinomane/zelda", - "url": "https://github.com/coccoinomane/zelda", - "rel": "/software/repository/github/coccoinomane/zelda", - "avatar": "https://avatars.githubusercontent.com/u/3920436?v=4", - "description": "Tool to generate correlation functions & power spectra from a galaxy catalogue.", + "uid": "github/sjbeckett/localcovid19now", + "url": "https://github.com/sjbeckett/localcovid19now", + "rel": "/software/repository/github/sjbeckett/localcovid19now", + "avatar": "https://avatars.githubusercontent.com/u/4902758?v=4", + "description": "processing and mapping COVID-19 case data at subnational scales", "topics": [] }, { - "uid": "github/coccoinomane/song", - "url": "https://github.com/coccoinomane/song", - "rel": "/software/repository/github/coccoinomane/song", - "avatar": "https://avatars.githubusercontent.com/u/3920436?v=4", - "description": "SONG (Second Order Non-Gaussianity) is a Boltzmann code that computes many observables related to the Cosmic Microwave Background and to the cosmological perturbations at second order in perturbation theory.", - "topics": [] + "uid": "github/USEPA/MCSimMod", + "url": "https://github.com/USEPA/MCSimMod", + "rel": "/software/repository/github/USEPA/MCSimMod", + "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", + "description": "MCSim Models in R", + "topics": [ + "ode-model", + "pbpk", + "pbpk-modeling", + "r", + "ode" + ] }, { - "uid": "github/iipharma/pharmamind-molminer", - "url": "https://github.com/iipharma/pharmamind-molminer", - "rel": "/software/repository/github/iipharma/pharmamind-molminer", - "avatar": "https://avatars.githubusercontent.com/u/106510298?v=4", - "description": "PharmaMind\u00ae is an innovative drug discovery platform that integrates advanced artificial intelligence and computational simulation design techniques, which is suitable for real-world novel drug R&D.", - "topics": [] + "uid": "github/USEPA/harmonize-wq", + "url": "https://github.com/USEPA/harmonize-wq", + "rel": "/software/repository/github/USEPA/harmonize-wq", + "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", + "description": "Standardize, clean, and wrangle Water Quality Portal data into more analytic-ready formats", + "topics": [ + "ord" + ] }, { - "uid": "github/sys-bio/ratesb_python", - "url": "https://github.com/sys-bio/ratesb_python", - "rel": "/software/repository/github/sys-bio/ratesb_python", - "avatar": "https://avatars.githubusercontent.com/u/5590646?v=4", - "description": "Analysis of rate laws in reaction networks.", + "uid": "github/USEPA/peat", + "url": "https://github.com/USEPA/peat", + "rel": "/software/repository/github/USEPA/peat", + "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", + "description": null, "topics": [] }, { - "uid": "github/kdeck/TTVFast", - "url": "https://github.com/kdeck/TTVFast", - "rel": "/software/repository/github/kdeck/TTVFast", - "avatar": "https://avatars.githubusercontent.com/u/6886360?v=4", - "description": "TTVFast efficiently calculates transit times for n-planet systems and the corresponding radial velocities.", + "uid": "github/USEPA/SSN2", + "url": "https://github.com/USEPA/SSN2", + "rel": "/software/repository/github/USEPA/SSN2", + "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", + "description": "SSN2: Spatial Modeling on Stream Networks in R", "topics": [] }, { - "uid": "github/QuaCaTeam/quaca", - "url": "https://github.com/QuaCaTeam/quaca", - "rel": "/software/repository/github/QuaCaTeam/quaca", - "avatar": "https://avatars.githubusercontent.com/u/65653300?v=4", - "description": "QuaCa is an open-source library which provides fast calculations of nonequilibrium atom-surface interactions.", + "uid": "github/USEPA/nsink", + "url": "https://github.com/USEPA/nsink", + "rel": "/software/repository/github/USEPA/nsink", + "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", + "description": null, "topics": [ - "physics", - "fluctuations", - "integration", - "casimir", - "quantum" + "ord" ] }, { - "uid": "github/Goobley/Radynversion", - "url": "https://github.com/Goobley/Radynversion", - "rel": "/software/repository/github/Goobley/Radynversion", - "avatar": "https://avatars.githubusercontent.com/u/9143392?v=4", - "description": "Inverting Solar Flare Observations with Invertible Neural Nets (with RADYN physics) ", - "topics": [] - }, - { - "uid": "github/light-curve/light-curve-python", - "url": "https://github.com/light-curve/light-curve-python", - "rel": "/software/repository/github/light-curve/light-curve-python", - "avatar": "https://avatars.githubusercontent.com/u/88137069?v=4", - "description": "light-curve feature extraction library for Python", + "uid": "github/PhysiBoSS/PhysiBoSS", + "url": "https://github.com/PhysiBoSS/PhysiBoSS", + "rel": "/software/repository/github/PhysiBoSS/PhysiBoSS", + "avatar": "https://avatars.githubusercontent.com/u/77400927?v=4", + "description": "PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks", "topics": [] }, { - "uid": "github/light-curve/light-curve", - "url": "https://github.com/light-curve/light-curve", - "rel": "/software/repository/github/light-curve/light-curve", - "avatar": "https://avatars.githubusercontent.com/u/88137069?v=4", - "description": "Collection of Rust packages for time-series analysis", + "uid": "github/GeodynamicWorldBuilder/WorldBuilder", + "url": "https://github.com/GeodynamicWorldBuilder/WorldBuilder", + "rel": "/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", + "avatar": "https://avatars.githubusercontent.com/u/40909724?v=4", + "description": "World Builder: An initial conditions generator for geodynamic modeling", "topics": [] }, { - "uid": "github/marschall-lab/panacus", - "url": "https://github.com/marschall-lab/panacus", - "rel": "/software/repository/github/marschall-lab/panacus", - "avatar": "https://avatars.githubusercontent.com/u/86833642?v=4", - "description": "Panacus is a tool for computing statistics for GFA-formatted pangenome graphs", + "uid": "github/2decomp-fft/2decomp-fft", + "url": "https://github.com/2decomp-fft/2decomp-fft", + "rel": "/software/repository/github/2decomp-fft/2decomp-fft", + "avatar": "https://avatars.githubusercontent.com/u/110181849?v=4", + "description": "The 2DECOMP&FFT library provides access to a slabs and pencil decompositions as well as FFTs. ", "topics": [ - "gfa", - "pangenomics", - "pangenome-growth", - "graph", - "pangenome", - "pangenome-graph" + "fast-fourier-transform", + "finite-difference-method", + "pencil-decomposition" ] }, { - "uid": "github/biosimulations/Biosimulations", - "url": "https://github.com/biosimulations/Biosimulations", - "rel": "/software/repository/github/biosimulations/Biosimulations", - "avatar": "https://avatars0.githubusercontent.com/u/53012665?v=4", - "description": "Platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results", - "topics": [ - "biology", - "modeling", - "simulation", - "standards", - "sbml", - "sed-ml", - "vega", - "reproducibility", - "biochemical-networks", - "biosimulations" - ] + "uid": "github/COSMIC-PopSynth/COSMIC", + "url": "https://github.com/COSMIC-PopSynth/COSMIC", + "rel": "/software/repository/github/COSMIC-PopSynth/COSMIC", + "avatar": "https://avatars.githubusercontent.com/u/32782229?v=4", + "description": "COSMIC (Compact Object Synthesis and Monte Carlo Investigation Code)", + "topics": [] }, { - "uid": "github/ruanjue/wtdbg2", - "url": "https://github.com/ruanjue/wtdbg2", - "rel": "/software/repository/github/ruanjue/wtdbg2", - "avatar": "https://avatars1.githubusercontent.com/u/16264260?v=4", - "description": "Redbean: A fuzzy Bruijn graph approach to long noisy reads assembly", + "uid": "github/DrMarc/slab", + "url": "https://github.com/DrMarc/slab", + "rel": "/software/repository/github/DrMarc/slab", + "avatar": "https://avatars.githubusercontent.com/u/7555727?v=4", + "description": "python classes for working with sounds and conducting psychoacoustic experiments", "topics": [ - "pacbio", - "nanopore", - "assembly", - "alignment" + "psychoacoustics", + "audio", + "sound" ] }, { - "uid": "github/JanCBrammer/biopeaks", - "url": "https://github.com/JanCBrammer/biopeaks", - "rel": "/software/repository/github/JanCBrammer/biopeaks", - "avatar": "https://avatars0.githubusercontent.com/u/30125107?v=4", - "description": "biopeaks: a graphical user interface for feature extraction from heart- and breathing biosignals", + "uid": "github/RozanskiT/suppnet", + "url": "https://github.com/RozanskiT/suppnet", + "rel": "/software/repository/github/RozanskiT/suppnet", + "avatar": "https://avatars.githubusercontent.com/u/30845410?v=4", + "description": "SUPPNet: Neural network for stellar spectrum normalisation", "topics": [ - "biosignals", - "bitalino", - "opensignals", - "ecg", - "breathing", - "signal-analysis", - "python", - "gui", - "heart", - "peak-detection", - "heart-rate", - "breathing-rate", - "edf", - "electrophysiology", - "ppg" + "spectroscopy", + "astronomy", + "astronomy-software" ] }, { - "uid": "github/henrycousins/gspa", - "url": "https://github.com/henrycousins/gspa", - "rel": "/software/repository/github/henrycousins/gspa", - "avatar": "https://avatars.githubusercontent.com/u/55973825?v=4", - "description": "Python implementation of gene set proximity analysis", - "topics": [] - }, - { - "uid": "github/ChileanVirtualObservatory/indexing_utfsm", - "url": "https://github.com/ChileanVirtualObservatory/indexing_utfsm", - "rel": "/software/repository/github/ChileanVirtualObservatory/indexing_utfsm", - "avatar": "https://avatars.githubusercontent.com/u/3382185?v=4", - "description": "R implementation of RoiSE algorithm", + "uid": "github/YenWenWang/HapDipKinship", + "url": "https://github.com/YenWenWang/HapDipKinship", + "rel": "/software/repository/github/YenWenWang/HapDipKinship", + "avatar": "https://avatars.githubusercontent.com/u/43101774?v=4", + "description": "Algorithms to estimate kinship in haploid-diploid mixed populations", "topics": [] }, { - "uid": "github/fzagaria/COpops", - "url": "https://github.com/fzagaria/COpops", - "rel": "/software/repository/github/fzagaria/COpops", - "avatar": "https://avatars.githubusercontent.com/u/124464817?v=4", - "description": "A Jupyter notebook with a simple class to compute CO sizes and fluxes using the semi-analytical method developed by Zagaria et al. (2023b).", + "uid": "github/BradyAJohnston/MolecularNodes", + "url": "https://github.com/BradyAJohnston/MolecularNodes", + "rel": "/software/repository/github/BradyAJohnston/MolecularNodes", + "avatar": "https://avatars.githubusercontent.com/u/36021261?v=4", + "description": "Toolbox for molecular animations in Blender, powered by Geometry Nodes.", "topics": [ - "interferometry", - "jupyter-notebook", - "modelling", - "population-synthesis", - "protoplanetary-discs", - "python" + "blender", + "biochemistry", + "geometry-nodes", + "protein", + "protein-structure", + "protein-visualization", + "sciart", + "visualisation", + "structural-biology", + "blender-addon", + "protein-data-bank", + "molecule", + "proteins", + "pdb", + "molecular-modeling", + "molecular", + "molecular-graphics", + "molecular-dynamics" ] }, { - "uid": "github/CNIC-Proteomics/TurboPutative-web", - "url": "https://github.com/CNIC-Proteomics/TurboPutative-web", - "rel": "/software/repository/github/CNIC-Proteomics/TurboPutative-web", - "avatar": "https://avatars.githubusercontent.com/u/28892822?v=4", - "description": null, + "uid": "github/rribeiro-sci/pygomodo", + "url": "https://github.com/rribeiro-sci/pygomodo", + "rel": "/software/repository/github/rribeiro-sci/pygomodo", + "avatar": "https://avatars.githubusercontent.com/u/33298926?v=4", + "description": "GPCRs modeling and docking with python", "topics": [ - "metabolomics", - "lc-ms", - "untargeted-metabolomics", - "data-processing" + "bioinformatics", + "bioinformatics-pipeline", + "bioinformatics-tool", + "gpcr", + "homology-modeling", + "molecular-docking" ] }, { - "uid": "github/mikegrudic/MakeCloud", - "url": "https://github.com/mikegrudic/MakeCloud", - "rel": "/software/repository/github/mikegrudic/MakeCloud", - "avatar": "https://avatars.githubusercontent.com/u/2715993?v=4", - "description": "MakeCloud: Make turbulent GMC initial conditions for GIZMO", - "topics": [] - }, - { - "uid": "github/mikegrudic/pytreegrav", - "url": "https://github.com/mikegrudic/pytreegrav", - "rel": "/software/repository/github/mikegrudic/pytreegrav", - "avatar": "https://avatars.githubusercontent.com/u/2715993?v=4", - "description": "Fast N-body gravitational force and potential in Python", - "topics": [] - }, - { - "uid": "github/moritzobenauer/ProjectRaccoon", - "url": "https://github.com/moritzobenauer/ProjectRaccoon", - "rel": "/software/repository/github/moritzobenauer/ProjectRaccoon", - "avatar": "https://avatars.githubusercontent.com/u/132915491?v=4", - "description": "Automated construction of atomistic and coarse-grained models in the PDB format for polymer peptide conjugates.", + "uid": "github/vrodgom/statmorph", + "url": "https://github.com/vrodgom/statmorph", + "rel": "/software/repository/github/vrodgom/statmorph", + "avatar": "https://avatars.githubusercontent.com/u/10121557?v=4", + "description": "Python code for calculating non-parametric morphological diagnostics of galaxy images.", "topics": [ - "molecular-dynamics-simulation", - "molecular-modeling", - "cheminformatics", - "pdb-files" + "astronomy", + "galaxies", + "galaxy-morphology", + "non-parametric" ] }, { - "uid": "github/EoRImaging/FHD", - "url": "https://github.com/EoRImaging/FHD", - "rel": "/software/repository/github/EoRImaging/FHD", - "avatar": "https://avatars.githubusercontent.com/u/18563618?v=4", - "description": "Fast Holographic Deconvolution", + "uid": "github/VALENCE-software/VALENCE", + "url": "https://github.com/VALENCE-software/VALENCE", + "rel": "/software/repository/github/VALENCE-software/VALENCE", + "avatar": "https://avatars.githubusercontent.com/u/45109653?v=4", + "description": "quantum chemistry software", "topics": [] }, { - "uid": "github/Julian/jsonschema", - "url": "https://github.com/Julian/jsonschema", - "rel": "/software/repository/github/Julian/jsonschema", - "avatar": "https://avatars.githubusercontent.com/u/329822?v=4", - "description": "An(other) implementation of JSON Schema for Python", + "uid": "github/RenLabBioinformatics/M6Allele", + "url": "https://github.com/RenLabBioinformatics/M6Allele", + "rel": "/software/repository/github/RenLabBioinformatics/M6Allele", + "avatar": "https://avatars.githubusercontent.com/u/36150099?v=4", + "description": "M6Allele: A toolkit for detection of allele-specific RNA N6-methyladenosine modifications", "topics": [] }, { - "uid": "github/BioComputingUP/ring-pymol", - "url": "https://github.com/BioComputingUP/ring-pymol", - "rel": "/software/repository/github/BioComputingUP/ring-pymol", - "avatar": "https://avatars.githubusercontent.com/u/7839689?v=4", - "description": "This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua", - "topics": [ - "bioinformatics", - "pymol", - "plugin" - ] + "uid": "github/jesford/cluster-lensing", + "url": "https://github.com/jesford/cluster-lensing", + "rel": "/software/repository/github/jesford/cluster-lensing", + "avatar": "https://avatars.githubusercontent.com/u/6848077?v=4", + "description": "Galaxy Cluster and Weak Lensing Tools", + "topics": [] }, { - "uid": "github/CheerfulUser/starkiller", - "url": "https://github.com/CheerfulUser/starkiller", - "rel": "/software/repository/github/CheerfulUser/starkiller", - "avatar": "https://avatars.githubusercontent.com/u/25831737?v=4", - "description": "Pipeline to simulate and subtract stars and satellites in an IFU data cube.", + "uid": "github/unmannedlab/ekf_cal", + "url": "https://github.com/unmannedlab/ekf_cal", + "rel": "/software/repository/github/unmannedlab/ekf_cal", + "avatar": "https://avatars.githubusercontent.com/u/57012544?v=4", + "description": "Extended Kalman Filter-Based Calibration and Localization", "topics": [] }, { - "uid": "github/arielmission-space/ExoSim2-public", - "url": "https://github.com/arielmission-space/ExoSim2-public", - "rel": "/software/repository/github/arielmission-space/ExoSim2-public", - "avatar": "https://avatars.githubusercontent.com/u/72981825?v=4", - "description": "ExoSim 2 is the next generation of the Exoplanet Observation Simulator (ExoSim) tailored for spectro-photometric observations of transiting exoplanets from space, ground, and sub-orbital platforms. This software is a complete rewrite implemented in Python 3, embracing object-oriented design principles.", + "uid": "github/guynir42/radon", + "url": "https://github.com/guynir42/radon", + "rel": "/software/repository/github/guynir42/radon", + "avatar": "https://avatars.githubusercontent.com/u/37179063?v=4", + "description": "Streak detection using the Fast Radon Transform", "topics": [] }, { - "uid": "github/arielmission-space/PAOS", - "url": "https://github.com/arielmission-space/PAOS", - "rel": "/software/repository/github/arielmission-space/PAOS", - "avatar": "https://avatars.githubusercontent.com/u/72981825?v=4", - "description": "PAOS is a fast, modern, and reliable Python package for Physical Optics studies.", + "uid": "github/Blosc/c-blosc", + "url": "https://github.com/Blosc/c-blosc", + "rel": "/software/repository/github/Blosc/c-blosc", + "avatar": "https://avatars3.githubusercontent.com/u/6469856?v=4", + "description": "A blocking, shuffling and loss-less compression library that can be faster than `memcpy()`.", "topics": [ - "fresnel", - "gui", - "open-source", - "optics", - "optics-simulation", - "paos", - "psf", - "python", - "ray-tracing", - "wavefront" + "c", + "compression", + "fast" ] }, { - "uid": "github/rformassspectrometry/SpectriPy", - "url": "https://github.com/rformassspectrometry/SpectriPy", - "rel": "/software/repository/github/rformassspectrometry/SpectriPy", - "avatar": "https://avatars.githubusercontent.com/u/51361942?v=4", - "description": "Interfacing R's Spectra package with the Python world.", + "uid": "github/amkrajewski/nimCSO", + "url": "https://github.com/amkrajewski/nimCSO", + "rel": "/software/repository/github/amkrajewski/nimCSO", + "avatar": "https://avatars.githubusercontent.com/u/54290107?v=4", + "description": "nim Composition Space Optimization is a high-performance tool leveraging metaprogramming to implement several methods for selecting components (data dimensions) in compositional datasets, as to optimize the data availability and density for applications such as machine learning.", "topics": [ - "mass-spectrometry", - "infrastructure", - "rstats", - "python" + "data-analysis", + "data-optimization", + "data-science", + "materials-informatics", + "metaprogramming", + "nim", + "nim-lang" ] }, { - "uid": "github/zhangyk8/sconce-scms", - "url": "https://github.com/zhangyk8/sconce-scms", - "rel": "/software/repository/github/zhangyk8/sconce-scms", - "avatar": "https://avatars.githubusercontent.com/u/30488853?v=4", - "description": "Spherical and Conic Cosmic Web Finders with Extended SCMS Algorithms", + "uid": "github/ouyang-lab/PRAS", + "url": "https://github.com/ouyang-lab/PRAS", + "rel": "/software/repository/github/ouyang-lab/PRAS", + "avatar": "https://avatars2.githubusercontent.com/u/44652339?v=4", + "description": "PRAS: predicting functional targets of RNA binding proteins based on CLIP-seq peaks", "topics": [] }, { - "uid": "github/ypmen/PulsarX", - "url": "https://github.com/ypmen/PulsarX", - "rel": "/software/repository/github/ypmen/PulsarX", - "avatar": "https://avatars.githubusercontent.com/u/16458116?v=4", - "description": "Pulsar searching", + "uid": "github/ogotoh/spaln", + "url": "https://github.com/ogotoh/spaln", + "rel": "/software/repository/github/ogotoh/spaln", + "avatar": "https://avatars.githubusercontent.com/u/33304110?v=4", + "description": "Genome mapping and spliced alignment of cDNA or amino acid sequences", "topics": [] }, { - "uid": "github/ssadedin/bazam", - "url": "https://github.com/ssadedin/bazam", - "rel": "/software/repository/github/ssadedin/bazam", - "avatar": "https://avatars.githubusercontent.com/u/138868?v=4", - "description": "A read extraction and realignment tool for next generation sequencing data", + "uid": "github/lanzen/ampliconnoise", + "url": "https://github.com/lanzen/ampliconnoise", + "rel": "/software/repository/github/lanzen/ampliconnoise", + "avatar": "https://avatars.githubusercontent.com/u/7382097?v=4", + "description": "Automatically exported from code.google.com/p/ampliconnoise", "topics": [] }, { - "uid": "github/JanLeppert/GasChromatographySimulator.jl", - "url": "https://github.com/JanLeppert/GasChromatographySimulator.jl", - "rel": "/software/repository/github/JanLeppert/GasChromatographySimulator.jl", - "avatar": "https://avatars.githubusercontent.com/u/68964801?v=4", - "description": "A package for the simulation of gas chromatography (GC)", + "uid": "github/jaschers/damspi", + "url": "https://github.com/jaschers/damspi", + "rel": "/software/repository/github/jaschers/damspi", + "avatar": "https://avatars.githubusercontent.com/u/39126851?v=4", + "description": null, "topics": [] }, { - "uid": "github/pyamg/pyamg", - "url": "https://github.com/pyamg/pyamg", - "rel": "/software/repository/github/pyamg/pyamg", - "avatar": "https://avatars.githubusercontent.com/u/4763879?v=4", - "description": "Algebraic Multigrid Solvers in Python", + "uid": "github/uclchem/SpectralRadex", + "url": "https://github.com/uclchem/SpectralRadex", + "rel": "/software/repository/github/uclchem/SpectralRadex", + "avatar": "https://avatars.githubusercontent.com/u/14346619?v=4", + "description": "A Python library for spectral modelling and RADEX", "topics": [ - "amg", - "solver", - "python", - "multigrid", - "sparse-matrix", - "pyamg", - "conda", - "krylov" + "astrophysics", + "radiative-transfer", + "radex", + "astronomy", + "python" ] }, { - "uid": "github/steineggerlab/foldmason", - "url": "https://github.com/steineggerlab/foldmason", - "rel": "/software/repository/github/steineggerlab/foldmason", - "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4", - "description": "Multiple Protein Structure Alignment at Scale with FoldMason", - "topics": [ - "bioinformatics", - "msa", - "protein-structure" - ] + "uid": "github/uclchem/Chemulator", + "url": "https://github.com/uclchem/Chemulator", + "rel": "/software/repository/github/uclchem/Chemulator", + "avatar": "https://avatars.githubusercontent.com/u/14346619?v=4", + "description": "The thermochemical emulator for hydrodynamical modelling", + "topics": [] }, { - "uid": "github/steineggerlab/foldseek", - "url": "https://github.com/steineggerlab/foldseek", - "rel": "/software/repository/github/steineggerlab/foldseek", - "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4", - "description": "Foldseek enables fast and sensitive comparisons of large structure sets.", - "topics": [ - "protein-structure", - "alignments" - ] + "uid": "github/Orin-beep/PlasGO", + "url": "https://github.com/Orin-beep/PlasGO", + "rel": "/software/repository/github/Orin-beep/PlasGO", + "avatar": "https://avatars.githubusercontent.com/u/56922562?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/nathanchara/l1periodogram", + "url": "https://github.com/nathanchara/l1periodogram", + "rel": "/software/repository/github/nathanchara/l1periodogram", + "avatar": "https://avatars.githubusercontent.com/u/31962940?v=4", + "description": "This repository contains a Python implementation of the l1 periodogram as described in Hara, Bou\u00e9, Laskar, Correia 2017, MNRAS, Vol. 464, Issue 1, p.1220-1246, with a few additions.", + "topics": [] + }, + { + "uid": "github/hasindu2008/slow5tools", + "url": "https://github.com/hasindu2008/slow5tools", + "rel": "/software/repository/github/hasindu2008/slow5tools", + "avatar": "https://avatars.githubusercontent.com/u/12987163?v=4", + "description": "Slow5tools is a toolkit for converting (FAST5 <-> SLOW5), compressing, viewing, indexing and manipulating data in SLOW5 format.", + "topics": [] }, { - "uid": "github/abs2k12/COCOA", - "url": "https://github.com/abs2k12/COCOA", - "rel": "/software/repository/github/abs2k12/COCOA", - "avatar": "https://avatars.githubusercontent.com/u/2988762?v=4", - "description": "COCOA Code for Simulating Observations of Star Cluster Simulations", + "uid": "github/fair-software/fairtally", + "url": "https://github.com/fair-software/fairtally", + "rel": "/software/repository/github/fair-software/fairtally", + "avatar": "https://avatars.githubusercontent.com/u/48952865?v=4", + "description": "Make a report based on howfairis results", "topics": [] }, { - "uid": "github/LiyrAstroph/PyCALI", - "url": "https://github.com/LiyrAstroph/PyCALI", - "rel": "/software/repository/github/LiyrAstroph/PyCALI", - "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", - "description": "A Python package to intercalibrate light curves. ", + "uid": "github/fair-software/howfairis", + "url": "https://github.com/fair-software/howfairis", + "rel": "/software/repository/github/fair-software/howfairis", + "avatar": "https://avatars0.githubusercontent.com/u/48952865?v=4", + "description": "Command line tool to analyze a GitHub or GitLab repository's compliance with the fair-software.eu recommendations", "topics": [] }, { - "uid": "github/LiyrAstroph/RECON", - "url": "https://github.com/LiyrAstroph/RECON", - "rel": "/software/repository/github/LiyrAstroph/RECON", - "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", - "description": "A method for measuring spectral power and reconstructing time series in active galactic nuclei", + "uid": "github/rvaser/sword", + "url": "https://github.com/rvaser/sword", + "rel": "/software/repository/github/rvaser/sword", + "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", + "description": "SWORD - a highly efficient protein database search", "topics": [] }, { - "uid": "github/LiyrAstroph/BRAINS", - "url": "https://github.com/LiyrAstroph/BRAINS", - "rel": "/software/repository/github/LiyrAstroph/BRAINS", - "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", - "description": "A package for dynamically modeling broad-line regions in active galactic nucleus, analyzing reverberation-mapping and spectro-astrometric data, and measuring the central black hole mass", + "uid": "github/rvaser/rampler", + "url": "https://github.com/rvaser/rampler", + "rel": "/software/repository/github/rvaser/rampler", + "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", + "description": "module for sampling genomic sequences", "topics": [] }, { - "uid": "github/LiyrAstroph/PIXON", - "url": "https://github.com/LiyrAstroph/PIXON", - "rel": "/software/repository/github/LiyrAstroph/PIXON", - "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", - "description": "a pixon-based method for reverberation mapping analysis in active galactic nuclei", + "uid": "github/rvaser/spoa", + "url": "https://github.com/rvaser/spoa", + "rel": "/software/repository/github/rvaser/spoa", + "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", + "description": "SIMD partial order alignment tool/library", "topics": [] }, { - "uid": "github/kitokamada/QUIDS", - "url": "https://github.com/kitokamada/QUIDS", - "rel": "/software/repository/github/kitokamada/QUIDS", - "avatar": "https://avatars.githubusercontent.com/u/135876292?v=4", - "description": "Q/U Integrated Dust Shells", + "uid": "github/rvaser/bioparser", + "url": "https://github.com/rvaser/bioparser", + "rel": "/software/repository/github/rvaser/bioparser", + "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", + "description": "C++ library for parsing several formats in bioinformatics", "topics": [] }, { - "uid": "github/PyTorchLightning/metrics", - "url": "https://github.com/PyTorchLightning/metrics", - "rel": "/software/repository/github/PyTorchLightning/metrics", - "avatar": "https://avatars.githubusercontent.com/u/58386951?v=4", - "description": "Machine learning metrics for distributed, scalable PyTorch applications.", + "uid": "github/rvaser/thread_pool", + "url": "https://github.com/rvaser/thread_pool", + "rel": "/software/repository/github/rvaser/thread_pool", + "avatar": "https://avatars.githubusercontent.com/u/6094359?v=4", + "description": "C++ thread pool library", + "topics": [] + }, + { + "uid": "github/Zilong-Li/PCAone", + "url": "https://github.com/Zilong-Li/PCAone", + "rel": "/software/repository/github/Zilong-Li/PCAone", + "avatar": "https://avatars.githubusercontent.com/u/11785793?v=4", + "description": "Principal Component Analysis All in One", "topics": [ - "python", - "data-science", - "machine-learning", - "pytorch", - "deep-learning", - "metrics", - "analyses" + "bioinformatics", + "population-genetics", + "pca", + "svd", + "scrna-seq", + "ukb" ] }, { - "uid": "github/jonaselgammal/GPry", - "url": "https://github.com/jonaselgammal/GPry", - "rel": "/software/repository/github/jonaselgammal/GPry", - "avatar": "https://avatars.githubusercontent.com/u/77438543?v=4", - "description": "A Package for Bayesian inference of expensive likelihoods with Gaussian Processes", + "uid": "github/PACurran/MCSpearman", + "url": "https://github.com/PACurran/MCSpearman", + "rel": "/software/repository/github/PACurran/MCSpearman", + "avatar": "https://avatars.githubusercontent.com/u/9524144?v=4", + "description": "Monte Carlo error analyses of Spearman\u2019s rank test", "topics": [] }, { - "uid": "github/jonaselgammal/SIGWAY", - "url": "https://github.com/jonaselgammal/SIGWAY", - "rel": "/software/repository/github/jonaselgammal/SIGWAY", - "avatar": "https://avatars.githubusercontent.com/u/77438543?v=4", - "description": "A code to calculate SIGW for either single-field, a function of curvature perturbations or an empirical spectrum of curvature perturbations", + "uid": "github/flu-crew/smot", + "url": "https://github.com/flu-crew/smot", + "rel": "/software/repository/github/flu-crew/smot", + "avatar": "https://avatars.githubusercontent.com/u/48957009?v=4", + "description": "Simple Manipulation Of Trees", "topics": [] }, { - "uid": "github/slimgroup/InvertibleNetworks.jl", - "url": "https://github.com/slimgroup/InvertibleNetworks.jl", - "rel": "/software/repository/github/slimgroup/InvertibleNetworks.jl", - "avatar": "https://avatars.githubusercontent.com/u/352217?v=4", - "description": "A Julia framework for invertible neural networks", + "uid": "github/hypre-space/hypredrive", + "url": "https://github.com/hypre-space/hypredrive", + "rel": "/software/repository/github/hypre-space/hypredrive", + "avatar": "https://avatars.githubusercontent.com/u/44828226?v=4", + "description": "High-level interface for solving linear systems with hypre", + "topics": [] + }, + { + "uid": "github/yymao/abundancematching", + "url": "https://github.com/yymao/abundancematching", + "rel": "/software/repository/github/yymao/abundancematching", + "avatar": "https://avatars.githubusercontent.com/u/3792659?v=4", + "description": "A Python package for subhalo abundance matching (SHAM) with scatter.", "topics": [ - "machine-learning", - "invertible-neural-networks", - "deep-invertible-networks", - "invertible-1x1-convolutions", - "normalizing-flows", - "julia", - "deep-learning", - "bayesian-inference", - "julia-language", - "normalizing-flow" + "subhalo-abundance-matching", + "abundance-matching", + "python", + "deconvolution", + "astrophysics" ] }, { - "uid": "github/Maison-de-la-Simulation/heraclespp", - "url": "https://github.com/Maison-de-la-Simulation/heraclespp", - "rel": "/software/repository/github/Maison-de-la-Simulation/heraclespp", - "avatar": "https://avatars.githubusercontent.com/u/60662067?v=4", - "description": "HERACLES++ is a hydrodynamic code with a moving grid, designed to run on different architectures using Kokkos.", - "topics": [] + "uid": "github/yymao/adstex", + "url": "https://github.com/yymao/adstex", + "rel": "/software/repository/github/yymao/adstex", + "avatar": "https://avatars.githubusercontent.com/u/3792659?v=4", + "description": "Automated generation of NASA ADS bibtex entries directly from citation keys in your TeX source files", + "topics": [ + "latex", + "astronomy", + "bibliography", + "bibtex-files", + "nasa-ads", + "python" + ] }, { - "uid": "github/SpeedyWeather/SpeedyWeather.jl", - "url": "https://github.com/SpeedyWeather/SpeedyWeather.jl", - "rel": "/software/repository/github/SpeedyWeather/SpeedyWeather.jl", - "avatar": "https://avatars.githubusercontent.com/u/117775587?v=4", - "description": "Play atmospheric modelling like it's LEGO.", + "uid": "github/ZhaiLab-SUSTech/FLEPSeq", + "url": "https://github.com/ZhaiLab-SUSTech/FLEPSeq", + "rel": "/software/repository/github/ZhaiLab-SUSTech/FLEPSeq", + "avatar": "https://avatars.githubusercontent.com/u/70678303?v=4", + "description": "The analysis pipeline for FLEP-seq", "topics": [] }, { - "uid": "github/karllark/DIRTY_dustrt", - "url": "https://github.com/karllark/DIRTY_dustrt", - "rel": "/software/repository/github/karllark/DIRTY_dustrt", - "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", - "description": "DIRTY: 3D dust radiative transfer for dusty astrophysical sources", + "uid": "github/COVID-IWG/epimargin", + "url": "https://github.com/COVID-IWG/epimargin", + "rel": "/software/repository/github/COVID-IWG/epimargin", + "avatar": "https://avatars.githubusercontent.com/u/82750933?v=4", + "description": "networked, stochastic SIRD epidemiological model with Bayesian parameter estimation and policy scenario comparison tools ", "topics": [ - "radiative-transfer", - "radiative-transfer-models", - "monte-carlo", - "interstellar-medium", - "dust" + "covid19", + "bayesian-methods", + "india", + "sird-model", + "stochastic-modeling" ] }, { - "uid": "github/karllark/measure_extinction", - "url": "https://github.com/karllark/measure_extinction", - "rel": "/software/repository/github/karllark/measure_extinction", - "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", - "description": "Measure interstellar dust extinction using pair method", + "uid": "github/marius311/cosmoslik", + "url": "https://github.com/marius311/cosmoslik", + "rel": "/software/repository/github/marius311/cosmoslik", + "avatar": "https://avatars.githubusercontent.com/u/1510968?v=4", + "description": "Cosmology Sampler of LIKelihoods", "topics": [ - "hacktoberfest" + "cosmology", + "mcmc", + "likelihood" ] }, { - "uid": "github/karllark/dust_extinction", - "url": "https://github.com/karllark/dust_extinction", - "rel": "/software/repository/github/karllark/dust_extinction", - "avatar": "https://avatars.githubusercontent.com/u/1554536?v=4", - "description": "Astronomical Dust Extinction", + "uid": "github/marius311/pypico", + "url": "https://github.com/marius311/pypico", + "rel": "/software/repository/github/marius311/pypico", + "avatar": "https://avatars.githubusercontent.com/u/1510968?v=4", + "description": "Quickly compute the CMB powerspectra and matter transfer functions.", + "topics": [] + }, + { + "uid": "github/paulbrodersen/netgraph", + "url": "https://github.com/paulbrodersen/netgraph", + "rel": "/software/repository/github/paulbrodersen/netgraph", + "avatar": "https://avatars.githubusercontent.com/u/8046146?v=4", + "description": "Publication-quality network visualisations in python", "topics": [ - "dust-extinction", - "extinction", - "astronomy", - "astrophysics", - "astropy", - "dust", - "hacktoberfest" + "network", + "visualization", + "network-analysis", + "publication-quality-plots", + "graph", + "graph-tool", + "igraph", + "matplotlib", + "network-science", + "networkx", + "python" ] }, { - "uid": "github/dentalfloss1/transients-simulations", - "url": "https://github.com/dentalfloss1/transients-simulations", - "rel": "/software/repository/github/dentalfloss1/transients-simulations", - "avatar": "https://avatars.githubusercontent.com/u/24629883?v=4", - "description": null, + "uid": "github/LuisGoncalves1/CLOWN", + "url": "https://github.com/LuisGoncalves1/CLOWN", + "rel": "/software/repository/github/LuisGoncalves1/CLOWN", + "avatar": "https://avatars.githubusercontent.com/u/80974501?v=4", + "description": "Cloud detection software to be applied in observatories with an all-sky camera.", "topics": [] }, { - "uid": "github/mib-unitn/SoFT", - "url": "https://github.com/mib-unitn/SoFT", - "rel": "/software/repository/github/mib-unitn/SoFT", - "avatar": "https://avatars.githubusercontent.com/u/150249871?v=4", - "description": "Feature tracking suite for the solar atmosphere", + "uid": "github/domschrei/mallob", + "url": "https://github.com/domschrei/mallob", + "rel": "/software/repository/github/domschrei/mallob", + "avatar": "https://avatars.githubusercontent.com/u/17687040?v=4", + "description": "Malleable Load Balancer. Massively Parallel Logic Backend. Award-winning SAT solving for the cloud.", "topics": [] }, { - "uid": "github/ArenA-Crowds/Crowds", - "url": "https://github.com/ArenA-Crowds/Crowds", - "rel": "/software/repository/github/ArenA-Crowds/Crowds", - "avatar": "https://avatars1.githubusercontent.com/u/27482561?v=4", - "description": "Jupyter python notebooks related to the ArenA project", + "uid": "github/wetransform-os/ProMCDA", + "url": "https://github.com/wetransform-os/ProMCDA", + "rel": "/software/repository/github/wetransform-os/ProMCDA", + "avatar": "https://avatars.githubusercontent.com/u/19746183?v=4", + "description": "A tool to estimate ranks of alternatives and their uncertainties based on the Multi Criteria Decision Analysis approach.", "topics": [] }, { - "uid": "github/JinxinMonash/PhageGE", - "url": "https://github.com/JinxinMonash/PhageGE", - "rel": "/software/repository/github/JinxinMonash/PhageGE", - "avatar": "https://avatars.githubusercontent.com/u/24647078?v=4", - "description": "Phage Genome Exploration", + "uid": "github/youngjookim/sdr", + "url": "https://github.com/youngjookim/sdr", + "rel": "/software/repository/github/youngjookim/sdr", + "avatar": "https://avatars.githubusercontent.com/u/6983325?v=4", + "description": null, "topics": [] }, { - "uid": "github/rochoa85/NTDHealth_Forms", - "url": "https://github.com/rochoa85/NTDHealth_Forms", - "rel": "/software/repository/github/rochoa85/NTDHealth_Forms", - "avatar": "https://avatars.githubusercontent.com/u/2809964?v=4", - "description": "Based on the OpenMRS HTML Form Entry module, you can find in this github repository a set of forms personalized for neglected tropical virus, including clinical assesment, personal history and epidemiological data. ", + "uid": "github/brandon-rhodes/python-jplephem", + "url": "https://github.com/brandon-rhodes/python-jplephem", + "rel": "/software/repository/github/brandon-rhodes/python-jplephem", + "avatar": "https://avatars.githubusercontent.com/u/166162?v=4", + "description": "Python version of NASA DE4xx ephemerides, the basis for the Astronomical Alamanac", "topics": [] }, { - "uid": "github/CliMA/CalibrateEmulateSample.jl", - "url": "https://github.com/CliMA/CalibrateEmulateSample.jl", - "rel": "/software/repository/github/CliMA/CalibrateEmulateSample.jl", - "avatar": "https://avatars.githubusercontent.com/u/43161188?v=4", - "description": "Stochastic Optimization, Learning, Uncertainty and Sampling", + "uid": "github/thomaspinder/GPJax", + "url": "https://github.com/thomaspinder/GPJax", + "rel": "/software/repository/github/thomaspinder/GPJax", + "avatar": "https://avatars.githubusercontent.com/u/20796877?v=4", + "description": "A didactic Gaussian process package for researchers in Jax.", + "topics": [ + "gaussian-processes", + "jax", + "probabilistic-programming", + "bayesian-inference", + "machine-learning" + ] + }, + { + "uid": "github/marver17/DICOMSEG_Converter", + "url": "https://github.com/marver17/DICOMSEG_Converter", + "rel": "/software/repository/github/marver17/DICOMSEG_Converter", + "avatar": "https://avatars.githubusercontent.com/u/55630091?v=4", + "description": "Nifti and rtstruct converter in dicomseg making for EUCAIM project", "topics": [] }, { - "uid": "github/CliMA/EnsembleKalmanProcesses.jl", - "url": "https://github.com/CliMA/EnsembleKalmanProcesses.jl", - "rel": "/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", - "avatar": "https://avatars.githubusercontent.com/u/43161188?v=4", - "description": "Implements Optimization and approximate uncertainty quantification algorithms, Ensemble Kalman Inversion, and Ensemble Kalman Processes.", + "uid": "github/rajewsky-lab/dropbead", + "url": "https://github.com/rajewsky-lab/dropbead", + "rel": "/software/repository/github/rajewsky-lab/dropbead", + "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", + "description": "Basic Exploration and Analysis of Drop-seq Data", "topics": [] }, { - "uid": "github/lzx325/DeeReCT-APA-repo", - "url": "https://github.com/lzx325/DeeReCT-APA-repo", - "rel": "/software/repository/github/lzx325/DeeReCT-APA-repo", - "avatar": "https://avatars.githubusercontent.com/u/18619553?v=4", + "uid": "github/rajewsky-lab/novosparc", + "url": "https://github.com/rajewsky-lab/novosparc", + "rel": "/software/repository/github/rajewsky-lab/novosparc", + "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", "description": null, "topics": [] }, { - "uid": "github/snad-space/ztf-viewer", - "url": "https://github.com/snad-space/ztf-viewer", - "rel": "/software/repository/github/snad-space/ztf-viewer", - "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", - "description": "ZTF data releases light curve viewer", + "uid": "github/rajewsky-lab/spacemake", + "url": "https://github.com/rajewsky-lab/spacemake", + "rel": "/software/repository/github/rajewsky-lab/spacemake", + "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", + "description": null, "topics": [] }, { - "uid": "github/snad-space/coniferest", - "url": "https://github.com/snad-space/coniferest", - "rel": "/software/repository/github/snad-space/coniferest", - "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", - "description": null, + "uid": "github/JulianKarlBauer/mechkit", + "url": "https://github.com/JulianKarlBauer/mechkit", + "rel": "/software/repository/github/JulianKarlBauer/mechkit", + "avatar": "https://avatars.githubusercontent.com/u/55383008?v=4", + "description": "Continuum mechanics toolkit", "topics": [ - "anomaly-detection", - "machine-learning" + "mechanics", + "mechanics-of-materials", + "python", + "continuum-mechanics" ] }, { - "uid": "github/snad-space/zwad", - "url": "https://github.com/snad-space/zwad", - "rel": "/software/repository/github/snad-space/zwad", - "avatar": "https://avatars.githubusercontent.com/u/63704930?v=4", - "description": "ZTF anomaly detection", + "uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", + "url": "https://github.com/ismael-mendoza/ShapeMeasurementFisherFormalism", + "rel": "/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", + "avatar": "https://avatars.githubusercontent.com/u/11745764?v=4", + "description": "Fisher Formalism for Weak Lensing using 1 or 2 Galsim galaxies.", + "topics": [ + "galsim", + "fisher-formalism", + "cosmology" + ] + }, + { + "uid": "github/martenlourens/pySDR", + "url": "https://github.com/martenlourens/pySDR", + "rel": "/software/repository/github/martenlourens/pySDR", + "avatar": "https://avatars.githubusercontent.com/u/14141310?v=4", + "description": "A Python library for performing local gradient clustering (LGC) based sharpened dimensionality reduction (SDR).", "topics": [] }, { - "uid": "github/Health-RI/img2catalog", - "url": "https://github.com/Health-RI/img2catalog", - "rel": "/software/repository/github/Health-RI/img2catalog", - "avatar": "https://avatars.githubusercontent.com/u/80106593?v=4", - "description": "Repository for a tool to help make XNAT into a FAIR Data Point", + "uid": "github/martenlourens/SHARC", + "url": "https://github.com/martenlourens/SHARC", + "rel": "/software/repository/github/martenlourens/SHARC", + "avatar": "https://avatars.githubusercontent.com/u/14141310?v=4", + "description": "A Python library for performing local gradient clustering (LGC) based SHArpened dimensionality Reduction (SDR) and Classification.", "topics": [] }, { - "uid": "github/INCEPTdk/adaptr", - "url": "https://github.com/INCEPTdk/adaptr", - "rel": "/software/repository/github/INCEPTdk/adaptr", - "avatar": "https://avatars.githubusercontent.com/u/82316354?v=4", - "description": "Adaptive Trial Simulator", + "uid": "github/suneeshjacob/ACRoD", + "url": "https://github.com/suneeshjacob/ACRoD", + "rel": "/software/repository/github/suneeshjacob/ACRoD", + "avatar": "https://avatars.githubusercontent.com/u/20991408?v=4", + "description": "Automatic Computation for Robot Design", "topics": [] }, { - "uid": "github/McPHAC/McPHAC", - "url": "https://github.com/McPHAC/McPHAC", - "rel": "/software/repository/github/McPHAC/McPHAC", - "avatar": "https://avatars.githubusercontent.com/u/1452620?v=4", - "description": "The McGill Planar Hydrogen Atmosphere Code", + "uid": "github/sagepublishing/rejected_article_tracker_pkg", + "url": "https://github.com/sagepublishing/rejected_article_tracker_pkg", + "rel": "/software/repository/github/sagepublishing/rejected_article_tracker_pkg", + "avatar": "https://avatars.githubusercontent.com/u/30350605?v=4", + "description": null, "topics": [] }, { - "uid": "github/csinva/imodels", - "url": "https://github.com/csinva/imodels", - "rel": "/software/repository/github/csinva/imodels", - "avatar": "https://avatars.githubusercontent.com/u/4960970?v=4", - "description": "Interpretable ML package \ud83d\udd0d for concise, transparent, and accurate predictive modeling (sklearn-compatible).", + "uid": "github/liuhao-cn/fastSHT", + "url": "https://github.com/liuhao-cn/fastSHT", + "rel": "/software/repository/github/liuhao-cn/fastSHT", + "avatar": "https://avatars.githubusercontent.com/u/31798291?v=4", + "description": "Fast Spherical Harmonic Transforms for a large number of sky maps", "topics": [ - "interpretability", - "machine-learning", - "data-science", - "artificial-intelligence", - "ml", - "ai", - "statistics", - "scikit-learn", - "python", - "bayesian-rule-lists", - "optimal-classification-tree", - "rulefit", - "uncertainty", - "demo", - "tutorial", - "imodels", - "rule-learning", - "supervised-learning" + "gpu-computing", + "spherical-harmonics", + "cosmic-microwave-background" ] }, { - "uid": "github/DataBiosphere/wdl-parsers", - "url": "https://github.com/DataBiosphere/wdl-parsers", - "rel": "/software/repository/github/DataBiosphere/wdl-parsers", - "avatar": "https://avatars.githubusercontent.com/u/32805087?v=4", - "description": "A package that provides the generated ANTLR4 WDL parsers for Python.", + "uid": "github/LucaMalavolta/CCFpams", + "url": "https://github.com/LucaMalavolta/CCFpams", + "rel": "/software/repository/github/LucaMalavolta/CCFpams", + "avatar": "https://avatars.githubusercontent.com/u/15183346?v=4", + "description": "Atmospheric Stellar Parameters from Cross-Correlation Functions for HARPS & HARPS-N", "topics": [] }, { - "uid": "github/uaf-arctic-eco-modeling/dvm-dos-tem", - "url": "https://github.com/uaf-arctic-eco-modeling/dvm-dos-tem", - "rel": "/software/repository/github/uaf-arctic-eco-modeling/dvm-dos-tem", - "avatar": "https://avatars.githubusercontent.com/u/115209183?v=4", - "description": "A process based Dynamic Vegetation, Dynamic Organic Soil, Terrestrial Ecosystem Model.", + "uid": "github/LucaMalavolta/PyORBIT", + "url": "https://github.com/LucaMalavolta/PyORBIT", + "rel": "/software/repository/github/LucaMalavolta/PyORBIT", + "avatar": "https://avatars.githubusercontent.com/u/15183346?v=4", + "description": "PyORBIT: a code for exoplanet orbital parameters and stellar activity.", + "topics": [] + }, + { + "uid": "github/ericmandel/funtools", + "url": "https://github.com/ericmandel/funtools", + "rel": "/software/repository/github/ericmandel/funtools", + "avatar": "https://avatars.githubusercontent.com/u/3028875?v=4", + "description": "a \"minimal buy-in\" FITS library and utility package for astronomical data analysis", + "topics": [] + }, + { + "uid": "github/carrerajimenez/pyCatIndex", + "url": "https://github.com/carrerajimenez/pyCatIndex", + "rel": "/software/repository/github/carrerajimenez/pyCatIndex", + "avatar": "https://avatars.githubusercontent.com/u/51076902?v=4", + "description": "Determination of CaT line strength", + "topics": [] + }, + { + "uid": "github/hyex-research/AquaFetch", + "url": "https://github.com/hyex-research/AquaFetch", + "rel": "/software/repository/github/hyex-research/AquaFetch", + "avatar": "https://avatars.githubusercontent.com/u/144527953?v=4", + "description": "A Unified Python Interface for Water Resource Data Acquisition", "topics": [ - "vegetation-dynamics", - "ecosystem-modeling", - "soil-thermal-dynamics", - "fire-dynamics", - "carbon-cycling", - "permafrost-dynamics", - "arctic", - "boreal", - "carbon", - "cryosphere", - "permafrost", - "terrestrial-ecosystem-modeling" + "big-data", + "database", + "hydrology", + "wastewater-treatment", + "water", + "water-quality" + ] + }, + { + "uid": "github/oliverphilcox/Spectra-Without-Windows", + "url": "https://github.com/oliverphilcox/Spectra-Without-Windows", + "rel": "/software/repository/github/oliverphilcox/Spectra-Without-Windows", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "Estimators and data for window-free analysis of power spectra and bispectra", + "topics": [ + "large-scale-structure", + "bispectrum", + "power-spectrum", + "cosmology", + "parameter-inference", + "boss-dr12" ] }, { - "uid": "github/magnuspalmblad/averageRegions", - "url": "https://github.com/magnuspalmblad/averageRegions", - "rel": "/software/repository/github/magnuspalmblad/averageRegions", - "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", - "description": "averageRegions averages the spectra in all or a defined subset of regions in a SCiLS Lab dataset and outputs this a Bruker-style .xy file.", + "uid": "github/oliverphilcox/PolyBin3D", + "url": "https://github.com/oliverphilcox/PolyBin3D", + "rel": "/software/repository/github/oliverphilcox/PolyBin3D", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "Binned polyspectrum estimation for 3D large-scale structure, optionally mask-deconvolved ", "topics": [] }, { - "uid": "github/magnuspalmblad/shic", - "url": "https://github.com/magnuspalmblad/shic", - "rel": "/software/repository/github/magnuspalmblad/shic", - "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", - "description": "shic is a collection of shims for use in automated workflow composition", + "uid": "github/oliverphilcox/EffectiveHalos", + "url": "https://github.com/oliverphilcox/EffectiveHalos", + "rel": "/software/repository/github/oliverphilcox/EffectiveHalos", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "A 1% accurate model of the matter power spectrum and cluster counts covariance, accurate to k = 1 h/Mpc.", "topics": [] }, { - "uid": "github/magnuspalmblad/navpa", - "url": "https://github.com/magnuspalmblad/navpa", - "rel": "/software/repository/github/magnuspalmblad/navpa", - "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", - "description": "Navpa is non-software, deriving its name from nav pa', Klingon for paper town.", + "uid": "github/oliverphilcox/HADES", + "url": "https://github.com/oliverphilcox/HADES", + "rel": "/software/repository/github/oliverphilcox/HADES", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "A Hexadecapolar Analysis for Dust Estimation in Simulations (of CMB B-mode thermal dust emission)", "topics": [] }, { - "uid": "github/magnuspalmblad/addFeatures", - "url": "https://github.com/magnuspalmblad/addFeatures", - "rel": "/software/repository/github/magnuspalmblad/addFeatures", - "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", - "description": "addFeatures adds spot images to a SCiLS Lab dataset from a list of defined mass spectral features", + "uid": "github/oliverphilcox/PolyBin", + "url": "https://github.com/oliverphilcox/PolyBin", + "rel": "/software/repository/github/oliverphilcox/PolyBin", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "Binned polyspectrum estimation on the full sky, optionally polarized and mask-deconvolved", "topics": [] }, { - "uid": "github/dawolfgang/MRrelation", - "url": "https://github.com/dawolfgang/MRrelation", - "rel": "/software/repository/github/dawolfgang/MRrelation", - "avatar": "https://avatars.githubusercontent.com/u/7773526?v=4", - "description": null, + "uid": "github/oliverphilcox/HIPSTER", + "url": "https://github.com/oliverphilcox/HIPSTER", + "rel": "/software/repository/github/oliverphilcox/HIPSTER", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "HIPSTER: HIgh-k Power SpecTrum and bispectrum EstimatoR", "topics": [] }, { - "uid": "github/klebgenomics/Kleborate", - "url": "https://github.com/klebgenomics/Kleborate", - "rel": "/software/repository/github/klebgenomics/Kleborate", - "avatar": "https://avatars.githubusercontent.com/u/129378057?v=4", - "description": "Kleborate: a tool for typing and screening pathogen genome assemblies", + "uid": "github/oliverphilcox/Keplers-Goat-Herd", + "url": "https://github.com/oliverphilcox/Keplers-Goat-Herd", + "rel": "/software/repository/github/oliverphilcox/Keplers-Goat-Herd", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "Solving Kepler's equation via contour integration, implemented in C++", "topics": [] }, { - "uid": "github/bruce-chappell/SunnyNet", - "url": "https://github.com/bruce-chappell/SunnyNet", - "rel": "/software/repository/github/bruce-chappell/SunnyNet", - "avatar": "https://avatars.githubusercontent.com/u/54310776?v=4", - "description": "Repository for SunnyNet network", + "uid": "github/oliverphilcox/encore", + "url": "https://github.com/oliverphilcox/encore", + "rel": "/software/repository/github/oliverphilcox/encore", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "encore: Efficient isotropic 2-, 3-, 4-, 5- and 6-point correlation functions in C++ and CUDA", "topics": [] }, { - "uid": "github/kdmurray91/libqes", - "url": "https://github.com/kdm9/libqes", - "rel": "/software/repository/github/kdmurray91/libqes", - "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", - "description": "A small C library, with a bioinformatic focus. Optimised for speed and a clean API", + "uid": "github/oliverphilcox/RascalC", + "url": "https://github.com/oliverphilcox/RascalC", + "rel": "/software/repository/github/oliverphilcox/RascalC", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "RascalC: A Fast Code for Galaxy Covariance Matrix Estimation", "topics": [] }, { - "uid": "github/kdmurray91/libqcpp", - "url": "https://github.com/kdm9/libqcpp", - "rel": "/software/repository/github/kdmurray91/libqcpp", - "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", - "description": "libqc++: C++11 library for next-gen sequence quality control and assessment.", + "uid": "github/oliverphilcox/OneLoopBispectrum", + "url": "https://github.com/oliverphilcox/OneLoopBispectrum", + "rel": "/software/repository/github/oliverphilcox/OneLoopBispectrum", + "avatar": "https://avatars.githubusercontent.com/u/30410089?v=4", + "description": "Computation of the one-loop bispectrum of galaxies in redshift space", "topics": [] }, { - "uid": "github/kdmurray91/axe", - "url": "https://github.com/kdm9/axe", - "rel": "/software/repository/github/kdmurray91/axe", - "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", - "description": "Rapid competitive read demulitplexer. Made with tries.", + "uid": "github/Peter-Hogg/SLAP2_Utils", + "url": "https://github.com/Peter-Hogg/SLAP2_Utils", + "rel": "/software/repository/github/Peter-Hogg/SLAP2_Utils", + "avatar": "https://avatars.githubusercontent.com/u/39841502?v=4", + "description": "SLAP2 Helper Functions", "topics": [] }, { - "uid": "github/williamjameshandley/fgivenx", - "url": "https://github.com/williamjameshandley/fgivenx", - "rel": "/software/repository/github/williamjameshandley/fgivenx", - "avatar": "https://avatars.githubusercontent.com/u/3708486?v=4", - "description": "Functional Posterior Plotter", - "topics": [ - "bayesian-inference", - "astrostatistics", - "astrophysics", - "cosmology", - "statistics", - "matplotlib", - "plotting" - ] + "uid": "github/nach00gar/16SMicrobiomeMLFS", + "url": "https://github.com/nach00gar/16SMicrobiomeMLFS", + "rel": "/software/repository/github/nach00gar/16SMicrobiomeMLFS", + "avatar": "https://avatars.githubusercontent.com/u/44344214?v=4", + "description": "Data & Code for the 16S Microbiome Disease Classification Article", + "topics": [] }, { - "uid": "github/williamjameshandley/anesthetic", - "url": "https://github.com/williamjameshandley/anesthetic", - "rel": "/software/repository/github/williamjameshandley/anesthetic", - "avatar": "https://avatars.githubusercontent.com/u/3708486?v=4", - "description": "Nested Sampling post-processing and plotting", + "uid": "github/HERA-Team/hera_opm", + "url": "https://github.com/HERA-Team/hera_opm", + "rel": "/software/repository/github/HERA-Team/hera_opm", + "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", + "description": "Online processing of HERA data", "topics": [ - "nested-sampling", - "bayesian-inference", - "mcmc", - "samples", - "matplotlib", - "pandas", - "fastkde", - "numpy", - "scipy" + "pipeline" ] }, { - "uid": "github/PeterKamphuis/FAT", - "url": "https://github.com/PeterKamphuis/FAT", - "rel": "/software/repository/github/PeterKamphuis/FAT", - "avatar": "https://avatars.githubusercontent.com/u/11264005?v=4", - "description": "An IDL/GDL wrapper to automate TiRiFiC", + "uid": "github/HERA-Team/matvis", + "url": "https://github.com/HERA-Team/matvis", + "rel": "/software/repository/github/HERA-Team/matvis", + "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", + "description": "Fast matrix-based visibility simulator", "topics": [ - "gdl", - "fat" + "21cm-signal", + "radio-astronomy", + "simulation", + "telescopes" ] }, { - "uid": "github/PeterKamphuis/pyFAT-astro", - "url": "https://github.com/PeterKamphuis/pyFAT-astro", - "rel": "/software/repository/github/PeterKamphuis/pyFAT-astro", - "avatar": "https://avatars.githubusercontent.com/u/11264005?v=4", - "description": "Python3 version of FAT. Extensive documentation can be found at https://pyfat-astro.readthedocs.io/en/latest/", - "topics": [] - }, - { - "uid": "github/BrockWW/BubbleFindingAlgorithm", - "url": "https://github.com/BrockWW/BubbleFindingAlgorithm", - "rel": "/software/repository/github/BrockWW/BubbleFindingAlgorithm", - "avatar": "https://avatars.githubusercontent.com/u/89614213?v=4", - "description": "Repository for developed algorithm used to find and measure supernovae bubbles in galaxy column density images.", - "topics": [] - }, - { - "uid": "github/kotekan/kotekan", - "url": "https://github.com/kotekan/kotekan", - "rel": "/software/repository/github/kotekan/kotekan", - "avatar": "https://avatars.githubusercontent.com/u/36037416?v=4", - "description": "High performance radio data processing pipeline", + "uid": "github/HERA-Team/aipy", + "url": "https://github.com/HERA-Team/aipy", + "rel": "/software/repository/github/HERA-Team/aipy", + "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", + "description": "Astronomical Interferometry in PYthon (AIPY)", "topics": [] }, { - "uid": "github/Dfam-consortium/RepeatModeler", - "url": "https://github.com/Dfam-consortium/RepeatModeler", - "rel": "/software/repository/github/Dfam-consortium/RepeatModeler", - "avatar": "https://avatars0.githubusercontent.com/u/40807771?v=4", - "description": "De-Novo Repeat Discovery Tool", + "uid": "github/rychallener/ThERESA", + "url": "https://github.com/rychallener/theresa", + "rel": "/software/repository/github/rychallener/ThERESA", + "avatar": "https://avatars.githubusercontent.com/u/11049765?v=4", + "description": "3D Exoplanet Cartography", "topics": [] }, { - "uid": "github/jeffcsauer/arcos_arcospy_information", - "url": "https://github.com/jeffcsauer/arcos_arcospy_information", - "rel": "/software/repository/github/jeffcsauer/arcos_arcospy_information", - "avatar": "https://avatars2.githubusercontent.com/u/31426294?v=4", - "description": "This is an informational landing page for the R arcos and Python arcospy software", - "topics": [] + "uid": "github/nationalparkservice/NPSdataverse", + "url": "https://github.com/nationalparkservice/NPSdataverse", + "rel": "/software/repository/github/nationalparkservice/NPSdataverse", + "avatar": "https://avatars.githubusercontent.com/u/1126069?v=4", + "description": "Loads a suite of R packages for creating and manipulating data packages including interacting with DataStore.", + "topics": [ + "datastore", + "eml-metadata", + "metadata", + "national-parks", + "data-packages", + "r", + "r-package", + "ecological-metadata-language", + "eml", + "accessible", + "data-package", + "findable", + "interoperable", + "machine-readable", + "national-park-service", + "open-data", + "reuseable" + ] }, { - "uid": "github/asgr/ProFuse", - "url": "https://github.com/asgr/ProFuse", - "rel": "/software/repository/github/asgr/ProFuse", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "ProFound + ProFit + ProSpect = ProFuse", + "uid": "github/c3s-magic/c3s-magic-wps", + "url": "https://github.com/c3s-magic/c3s-magic-wps", + "rel": "/software/repository/github/c3s-magic/c3s-magic-wps", + "avatar": "https://avatars1.githubusercontent.com/u/22588564?v=4", + "description": null, "topics": [] }, { - "uid": "github/asgr/hyper.fit", - "url": "https://github.com/asgr/hyper.fit", - "rel": "/software/repository/github/asgr/hyper.fit", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "The hyper.fit hyperplane fitting package.", + "uid": "github/LBNL-ETA/MSWH", + "url": "https://github.com/LBNL-ETA/MSWH", + "rel": "/software/repository/github/LBNL-ETA/MSWH", + "avatar": "https://avatars1.githubusercontent.com/u/14825882?v=4", + "description": "Multiscale Solar Water Heating", "topics": [] }, { - "uid": "github/asgr/Rwcs", - "url": "https://github.com/asgr/Rwcs", - "rel": "/software/repository/github/asgr/Rwcs", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "Interface to C wcslib", + "uid": "github/UcarLab/AMULET", + "url": "https://github.com/UcarLab/AMULET", + "rel": "/software/repository/github/UcarLab/AMULET", + "avatar": "https://avatars.githubusercontent.com/u/16825298?v=4", + "description": "A count based method for detecting doublets from single nucleus ATAC-seq (snATAC-seq) data.", "topics": [] }, { - "uid": "github/asgr/ProPane", - "url": "https://github.com/asgr/ProPane", - "rel": "/software/repository/github/asgr/ProPane", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "Package of stacking related functions, replacing older Rwcs and ProFound related functions.", - "topics": [] + "uid": "github/biosimulations/Biosimulations", + "url": "https://github.com/biosimulations/Biosimulations", + "rel": "/software/repository/github/biosimulations/Biosimulations", + "avatar": "https://avatars0.githubusercontent.com/u/53012665?v=4", + "description": "Platform for sharing and reusing biomodeling studies including models, simulations, and visualizations of their results", + "topics": [ + "biology", + "modeling", + "simulation", + "standards", + "sbml", + "sed-ml", + "vega", + "reproducibility", + "biochemical-networks", + "biosimulations" + ] }, { - "uid": "github/asgr/ProSpect", - "url": "https://github.com/asgr/ProSpect", - "rel": "/software/repository/github/asgr/ProSpect", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "Spectral Generation Package", + "uid": "github/ToHanwei/Genome2OR", + "url": "https://github.com/ToHanwei/Genome2OR", + "rel": "/software/repository/github/ToHanwei/Genome2OR", + "avatar": "https://avatars.githubusercontent.com/u/34996314?v=4", + "description": "Annotate Olfactory receptor CDS from genome", "topics": [] }, { - "uid": "github/asgr/celestial", - "url": "https://github.com/asgr/celestial", - "rel": "/software/repository/github/asgr/celestial", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "celestial R package", + "uid": "github/gem-pasteur/macsylib", + "url": "https://github.com/gem-pasteur/macsylib", + "rel": "/software/repository/github/gem-pasteur/macsylib", + "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", + "description": "Python library that help to detect of macromolecular, systems genetic pathways\u2026 in prokaryotes protein datasets", "topics": [] }, { - "uid": "github/asgr/ProFound", - "url": "https://github.com/asgr/ProFound", - "rel": "/software/repository/github/asgr/ProFound", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "ProFound source finding and extraction", - "topics": [] + "uid": "github/gem-pasteur/Integron_Finder", + "url": "https://github.com/gem-pasteur/Integron_Finder", + "rel": "/software/repository/github/gem-pasteur/Integron_Finder", + "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", + "description": "Bioinformatics tool to find integrons in bacterial genomes", + "topics": [ + "bioinformatics", + "bacterial-genomes", + "identification" + ] }, { - "uid": "github/asgr/NFWdist", - "url": "https://github.com/asgr/NFWdist", - "rel": "/software/repository/github/asgr/NFWdist", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "Density, distribution function, quantile function and random generation for the 3D NFW profile", + "uid": "github/gem-pasteur/macsyfinder", + "url": "https://github.com/gem-pasteur/macsyfinder", + "rel": "/software/repository/github/gem-pasteur/macsyfinder", + "avatar": "https://avatars.githubusercontent.com/u/5920106?v=4", + "description": "MacSyFinder - Detection of macromolecular systems in protein datasets using systems modelling and similarity search.", "topics": [] }, { - "uid": "github/asgr/Rfits", - "url": "https://github.com/asgr/Rfits", - "rel": "/software/repository/github/asgr/Rfits", - "avatar": "https://avatars.githubusercontent.com/u/5617132?v=4", - "description": "Rfits stuff", + "uid": "github/hildebra/LCA", + "url": "https://github.com/hildebra/LCA", + "rel": "/software/repository/github/hildebra/LCA", + "avatar": "https://avatars.githubusercontent.com/u/19647604?v=4", + "description": "least common ancestor evaluation given tax database and ", "topics": [] }, { - "uid": "github/jpahlers/LASR", - "url": "https://github.com/jpahlers/LASR", - "rel": "/software/repository/github/jpahlers/LASR", - "avatar": "https://avatars.githubusercontent.com/u/38013473?v=4", - "description": "Code and dependencies for the Linear Algorithm for Significance Reduction, developed by various members of the University of Idaho's Department of Physics.", + "uid": "github/hildebra/sdm", + "url": "https://github.com/hildebra/sdm", + "rel": "/software/repository/github/hildebra/sdm", + "avatar": "https://avatars.githubusercontent.com/u/19647604?v=4", + "description": "Fast tool for sequence related tasks", "topics": [] }, { - "uid": "github/openCARP-org/FACILE-RS", - "url": "https://github.com/openCARP-org/FACILE-RS", - "rel": "/software/repository/github/openCARP-org/FACILE-RS", - "avatar": "https://avatars.githubusercontent.com/u/179502374?v=4", - "description": "This repository is a mirror of the main FACILE-RS repository at https://git.opencarp.org/openCARP/FACILE-RS. You can use this mirror to submit pull requests and contribute to the project.", + "uid": "github/JakobBD/pounce", + "url": "https://github.com/JakobBD/pounce", + "rel": "/software/repository/github/JakobBD/pounce", + "avatar": "https://avatars.githubusercontent.com/u/44020564?v=4", + "description": null, "topics": [] }, { - "uid": "github/KolmogorovLab/Severus", - "url": "https://github.com/KolmogorovLab/Severus", - "rel": "/software/repository/github/KolmogorovLab/Severus", - "avatar": "https://avatars.githubusercontent.com/u/115726369?v=4", - "description": "A tool for somatic structural variant calling using long reads", + "uid": "github/Pinlyu3/LRLoop", + "url": "https://github.com/Pinlyu3/LRLoop", + "rel": "/software/repository/github/Pinlyu3/LRLoop", + "avatar": "https://avatars.githubusercontent.com/u/76225738?v=4", + "description": "LRLoop", "topics": [] }, { - "uid": "github/pmeier/pystiche", - "url": "https://github.com/pmeier/pystiche", - "rel": "/software/repository/github/pmeier/pystiche", - "avatar": "https://avatars0.githubusercontent.com/u/6849766?v=4", - "description": "Framework for Neural Style Transfer (NST) built upon PyTorch", - "topics": [ - "python", - "neural-style-transfer", - "framework", - "pytorch" - ] - }, - { - "uid": "github/torognes/swarm", - "url": "https://github.com/torognes/swarm", - "rel": "/software/repository/github/torognes/swarm", - "avatar": "https://avatars.githubusercontent.com/u/2765754?v=4", - "description": "A robust and fast clustering method for amplicon-based studies", - "topics": [ - "metabarcoding", - "clustering", - "bioinformatics", - "microbiome", - "sequence", - "fasta" - ] - }, - { - "uid": "github/torognes/vsearch", - "url": "https://github.com/torognes/vsearch", - "rel": "/software/repository/github/torognes/vsearch", - "avatar": "https://avatars.githubusercontent.com/u/2765754?v=4", - "description": "Versatile open-source tool for microbiome analysis", - "topics": [ - "metabarcoding", - "metagenomics", - "chimera", - "bioinformatics", - "fastq", - "fasta", - "microbiome", - "amplicon", - "sequence-alignment", - "clustering", - "search" - ] - }, - { - "uid": "github/2decomp-fft/2decomp-fft", - "url": "https://github.com/2decomp-fft/2decomp-fft", - "rel": "/software/repository/github/2decomp-fft/2decomp-fft", - "avatar": "https://avatars.githubusercontent.com/u/110181849?v=4", - "description": "The 2DECOMP&FFT library provides access to a slabs and pencil decompositions as well as FFTs. ", + "uid": "github/pharo-project/pharo", + "url": "https://github.com/pharo-project/pharo", + "rel": "/software/repository/github/pharo-project/pharo", + "avatar": "https://avatars.githubusercontent.com/u/1838382?v=4", + "description": "Pharo is a dynamic reflective pure object-oriented language supporting live programming inspired by Smalltalk.", "topics": [ - "fast-fourier-transform", - "finite-difference-method", - "pencil-decomposition" + "pharo", + "reflective", + "language", + "tools", + "bootstrap", + "object-oriented-programming", + "live-programming", + "mit" ] }, { - "uid": "github/flintproject/Flint", - "url": "https://github.com/flintproject/Flint", - "rel": "/software/repository/github/flintproject/Flint", - "avatar": "https://avatars2.githubusercontent.com/u/11284249?v=4", - "description": "A simulator for biological and physiological models", + "uid": "github/dspelaez/extended-wdm", + "url": "https://github.com/dspelaez/extended-wdm", + "rel": "/software/repository/github/dspelaez/extended-wdm", + "avatar": "https://avatars.githubusercontent.com/u/6423179?v=4", + "description": "Python toolkit for estimating directional wave spectra of ocean waves based on wavelet transform", "topics": [ - "simulator", - "biology", - "physiology", - "cellml", - "phml", - "sbml", - "ode", - "sde" + "spotter", + "wavelets", + "waves", + "wdm", + "adcps", + "directional-spectrum", + "wavestaffs" ] }, { - "uid": "github/benyhh/ml-telescope-pointing-correction", - "url": "https://github.com/benyhh/ml-telescope-pointing-correction", - "rel": "/software/repository/github/benyhh/ml-telescope-pointing-correction", - "avatar": "https://avatars.githubusercontent.com/u/59779138?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/aobr/gsf", - "url": "https://github.com/aobr/gsf", - "rel": "/software/repository/github/aobr/gsf", - "avatar": "https://avatars.githubusercontent.com/u/7265091?v=4", - "description": "galactic structure finder", + "uid": "github/nayu0419/stMMR", + "url": "https://github.com/nayu0419/stMMR", + "rel": "/software/repository/github/nayu0419/stMMR", + "avatar": "https://avatars.githubusercontent.com/u/49137187?v=4", + "description": "stMMR", "topics": [] }, { - "uid": "github/BiomedSciAI/fuse-med-ml", - "url": "https://github.com/BiomedSciAI/fuse-med-ml", - "rel": "/software/repository/github/BiomedSciAI/fuse-med-ml", - "avatar": "https://avatars.githubusercontent.com/u/108874137?v=4", - "description": "A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)", + "uid": "github/AstraZeneca/kallisto", + "url": "https://github.com/AstraZeneca/kallisto", + "rel": "/software/repository/github/AstraZeneca/kallisto", + "avatar": "https://avatars.githubusercontent.com/u/16338928?v=4", + "description": "Efficiently calculate 3D-atomic/molecular features for quantitative structure-activity relationship approaches.", "topics": [ - "deep-learning", - "machine-learning", - "pytorch", - "collaboration", - "fuse-med-ml", - "fusemedml", - "fuse", - "medical", - "medical-imaging", - "healthcare", - "vision", - "multimodality", - "ai", - "python", - "cmmd", - "isic", - "ct", - "stoic", - "knight-challenge", - "hacktoberfest" + "chemistry", + "computational-chemistry", + "machinelearning", + "quantum-chemistry" ] }, { - "uid": "github/mrline/CHIMERA", - "url": "https://github.com/mrline/CHIMERA", - "rel": "/software/repository/github/mrline/CHIMERA", - "avatar": "https://avatars.githubusercontent.com/u/23504081?v=4", - "description": "Atmospheric Retrieval Codes for Exoplanets", - "topics": [] + "uid": "github/CaymanUnterborn/ExoPlex", + "url": "https://github.com/CaymanUnterborn/ExoPlex", + "rel": "/software/repository/github/CaymanUnterborn/ExoPlex", + "avatar": "https://avatars.githubusercontent.com/u/7727288?v=4", + "description": "A thermodynamically self-consistent mass-radius-composition calculator", + "topics": [ + "exoplanets", + "interiors", + "mineralogy" + ] }, { - "uid": "github/liamedeiros/ehtplot", - "url": "https://github.com/liamedeiros/ehtplot", - "rel": "/software/repository/github/liamedeiros/ehtplot", - "avatar": "https://avatars.githubusercontent.com/u/20053280?v=4", - "description": "Plotting functions for the Event Horizon Telescope", + "uid": "github/auranic/ClinTrajan", + "url": "https://github.com/auranic/ClinTrajan", + "rel": "/software/repository/github/auranic/ClinTrajan", + "avatar": "https://avatars0.githubusercontent.com/u/15074578?v=4", + "description": "Finding trajectories, bifurcations and quantifying pseudotime in large clinical datasets", "topics": [] }, { - "uid": "github/nye17/javelin", - "url": "https://github.com/nye17/javelin", - "rel": "/software/repository/github/nye17/javelin", - "avatar": "https://avatars.githubusercontent.com/u/1127638?v=4", - "description": "JAVELIN is now working under Python 3!", + "uid": "github/pjcigan/obsplanning", + "url": "https://github.com/pjcigan/obsplanning", + "rel": "/software/repository/github/pjcigan/obsplanning", + "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", + "description": "Python tools for planning astronomical observations", "topics": [] }, { - "uid": "github/gdefazio/kMetaShot", - "url": "https://github.com/gdefazio/kMetaShot", - "rel": "/software/repository/github/gdefazio/kMetaShot", - "avatar": "https://avatars.githubusercontent.com/u/48283042?v=4", - "description": null, + "uid": "github/pjcigan/pysymlog", + "url": "https://github.com/pjcigan/pysymlog", + "rel": "/software/repository/github/pjcigan/pysymlog", + "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", + "description": "Utilities for plotting in matplotlib, plotly, etc. using a symmetric or signed log transform. This allows the plotting of positive and negative data with a pseudo-log axis scale or stretch. ", "topics": [] }, { - "uid": "github/hera-team/librarian", - "url": "https://github.com/HERA-Team/librarian", - "rel": "/software/repository/github/hera-team/librarian", - "avatar": "https://avatars.githubusercontent.com/u/14352544?v=4", - "description": "The HERA Librarian.", + "uid": "github/pjcigan/multicolorfits", + "url": "https://github.com/pjcigan/multicolorfits", + "rel": "/software/repository/github/pjcigan/multicolorfits", + "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", + "description": "Python tool for colorizing and combining fits images.", "topics": [] }, { - "uid": "github/chandra-marx/marxs", - "url": "https://github.com/Chandra-MARX/marxs", - "rel": "/software/repository/github/chandra-marx/marxs", - "avatar": "https://avatars.githubusercontent.com/u/10633195?v=4", - "description": "Multi-Architecture-Raytrace-Xraymission-Simulator", + "uid": "github/pavolgaj/OCFit", + "url": "https://github.com/pavolgaj/OCFit", + "rel": "/software/repository/github/pavolgaj/OCFit", + "avatar": "https://avatars.githubusercontent.com/u/17177193?v=4", + "description": "Python package for fitting of O-C diagrams.", "topics": [ "python", - "raytracing", - "astronomy" + "astronomy", + "fitting-algorithm" ] }, { - "uid": "github/mlegr/EqualISER", - "url": "https://github.com/mlegr/EqualISER", - "rel": "/software/repository/github/mlegr/EqualISER", - "avatar": "https://avatars.githubusercontent.com/u/92648586?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/BioSTEAMDevelopmentGroup/thermosteam", - "url": "https://github.com/BioSTEAMDevelopmentGroup/thermosteam", - "rel": "/software/repository/github/BioSTEAMDevelopmentGroup/thermosteam", - "avatar": "https://avatars0.githubusercontent.com/u/61621970?v=4", - "description": "BioSTEAM's Premier Thermodynamic Engine", + "uid": "github/pavolgaj/ObsPlanner", + "url": "https://github.com/pavolgaj/ObsPlanner", + "rel": "/software/repository/github/pavolgaj/ObsPlanner", + "avatar": "https://avatars.githubusercontent.com/u/17177193?v=4", + "description": "Simple program for planning and managing astronomical observations", "topics": [ - "thermodynamics", - "reaction", - "chemical", - "mixture", - "properties", - "vapor-liquid-equilibrium", - "material-and-energy-balance", - "chemical-engineering", - "equations-of-state", - "liquid-liquid-equilibrium" + "astronomy", + "observation" ] }, { - "uid": "github/opengenomebrowser/opengenomebrowser", - "url": "https://github.com/opengenomebrowser/opengenomebrowser", - "rel": "/software/repository/github/opengenomebrowser/opengenomebrowser", - "avatar": "https://avatars.githubusercontent.com/u/75793699?v=4", - "description": null, - "topics": [] + "uid": "github/henrysky/astroNN", + "url": "https://github.com/henrysky/astroNN", + "rel": "/software/repository/github/henrysky/astroNN", + "avatar": "https://avatars.githubusercontent.com/u/28623434?v=4", + "description": "Deep Learning for Astronomers with Tensorflow", + "topics": [ + "tensorflow", + "neural-network", + "python", + "astronomy", + "astrophysics", + "science", + "neural-networks" + ] }, { - "uid": "github/dputhier/pygtftk", - "url": "https://github.com/dputhier/pygtftk", - "rel": "/software/repository/github/dputhier/pygtftk", - "avatar": "https://avatars.githubusercontent.com/u/1831198?v=4", - "description": "A python package and a set of shell commands to handle GTF files", + "uid": "github/dankelley/oce", + "url": "https://github.com/dankelley/oce", + "rel": "/software/repository/github/dankelley/oce", + "avatar": "https://avatars.githubusercontent.com/u/99469?v=4", + "description": "R package for oceanographic processing", "topics": [ - "bioinformatics", - "gene", - "gtf", - "bed", - "bigwig", - "genomics", - "transcript", - "exon", - "cds", - "genomic", - "tss", - "tts", - "splicing", - "dna-sequences", - "intron", - "ngs", - "chip-seq", - "rna-seq" + "oceanography", + "r" ] }, { - "uid": "github/FoxFortino/ABC-SN", - "url": "https://github.com/FoxFortino/ABC-SN", - "rel": "/software/repository/github/FoxFortino/ABC-SN", - "avatar": "https://avatars.githubusercontent.com/u/29548930?v=4", - "description": "The Attention Based Classifier for Supernovae (ABC-SN) is a neural network, inspired by the Transformer, to classify supernova into subtypes based on their spectra.", + "uid": "github/Ramialison-Lab-ARMI/3DCardiomics", + "url": "https://github.com/Ramialison-Lab-ARMI/3DCardiomics", + "rel": "/software/repository/github/Ramialison-Lab-ARMI/3DCardiomics", + "avatar": "https://avatars2.githubusercontent.com/u/11384379?v=4", + "description": "A visual system for the exploration of cardiac transcriptome data", "topics": [] }, { - "uid": "github/ShixiangWang/sigminer", - "url": "https://github.com/ShixiangWang/sigminer", - "rel": "/software/repository/github/ShixiangWang/sigminer", - "avatar": "https://avatars1.githubusercontent.com/u/25057508?v=4", - "description": "\ud83c\udf32 An easy-to-use and scalable toolkit for genomic alteration (mutational) signature analysis and visualization in R", + "uid": "github/hauselin/ollama-r", + "url": "https://github.com/hauselin/ollama-r", + "rel": "/software/repository/github/hauselin/ollama-r", + "avatar": "https://avatars.githubusercontent.com/u/7620977?v=4", + "description": "R library to run Ollama language models", "topics": [ - "mutational-signatures", - "copynumber-signatures", - "somatic-variants", - "somatic-mutations", - "cosmic-signatures", - "signature-extraction", - "nmf", - "nmf-extraction", - "bayesian-nmf", - "bioinformatics", + "llms", "r", - "cancer-research", - "visualization", - "sbs", - "dbs", - "indel", - "cnv", - "easy-to-use" + "ollama", + "ollama-api", + "ai", + "llm", + "api" ] }, { - "uid": "github/ogotoh/spaln", - "url": "https://github.com/ogotoh/spaln", - "rel": "/software/repository/github/ogotoh/spaln", - "avatar": "https://avatars.githubusercontent.com/u/33304110?v=4", - "description": "Genome mapping and spliced alignment of cDNA or amino acid sequences", - "topics": [] + "uid": "github/statsmodels/statsmodels", + "url": "https://github.com/statsmodels/statsmodels", + "rel": "/software/repository/github/statsmodels/statsmodels", + "avatar": "https://avatars3.githubusercontent.com/u/717666?v=4", + "description": "Statsmodels: statistical modeling and econometrics in Python", + "topics": [ + "python", + "statistics", + "econometrics", + "data-analysis", + "generalized-linear-models", + "timeseries-analysis", + "regression-models" + ] }, { - "uid": "github/daler/gffutils", - "url": "https://github.com/daler/gffutils", - "rel": "/software/repository/github/daler/gffutils", - "avatar": "https://avatars.githubusercontent.com/u/115406?v=4", - "description": "GFF and GTF file manipulation and interconversion", + "uid": "github/takfung/ResDisMapper", + "url": "https://github.com/takfung/ResDisMapper", + "rel": "/software/repository/github/takfung/ResDisMapper", + "avatar": "https://avatars2.githubusercontent.com/u/40194137?v=4", + "description": null, "topics": [] }, { - "uid": "github/daler/pybedtools", - "url": "https://github.com/daler/pybedtools", - "rel": "/software/repository/github/daler/pybedtools", - "avatar": "https://avatars.githubusercontent.com/u/115406?v=4", - "description": "Python wrapper -- and more -- for BEDTools (bioinformatics tools for \"genome arithmetic\")", + "uid": "github/bengeof/QPoweredCompound2DeNovoDrugPropMax", + "url": "https://github.com/bengeof/QPoweredCompound2DeNovoDrugPropMax", + "rel": "/software/repository/github/bengeof/QPoweredCompound2DeNovoDrugPropMax", + "avatar": "https://avatars.githubusercontent.com/u/65452898?v=4", + "description": null, "topics": [] }, { - "uid": "github/EMSL-Computing/Pore2Chip", - "url": "https://github.com/EMSL-Computing/Pore2Chip", - "rel": "/software/repository/github/EMSL-Computing/Pore2Chip", - "avatar": "https://avatars.githubusercontent.com/u/43354427?v=4", - "description": "A python package that takes XCT images of porous materials and generates representative digital twin micromodels", + "uid": "github/scikit-learn/scikit-learn", + "url": "https://github.com/scikit-learn/scikit-learn", + "rel": "/software/repository/github/scikit-learn/scikit-learn", + "avatar": "https://avatars2.githubusercontent.com/u/365630?v=4", + "description": "scikit-learn: machine learning in Python", "topics": [ - "lab", - "openpnm", - "pore-network", - "soil", - "xct", - "experimental-design", - "flow", - "model-data-fusion", - "neural-networks", - "reactive-transport", - "terraforms", - "lab-on-chip", - "microfluidics-chip-enrichment", - "porous-materials", - "porous-media", + "machine-learning", "python", - "scientific-visualization", - "data-analysis", - "data-visualization", - "machine-learning" + "statistics", + "data-science", + "data-analysis" ] }, { - "uid": "github/SSAGESproject/SSAGES", - "url": "https://github.com/SSAGESproject/SSAGES", - "rel": "/software/repository/github/SSAGESproject/SSAGES", - "avatar": "https://avatars.githubusercontent.com/u/22507151?v=4", - "description": "Software Suite for Advanced General Ensemble Simulations", + "uid": "github/nickk124/RCR", + "url": "https://github.com/nickk124/RCR", + "rel": "/software/repository/github/nickk124/RCR", + "avatar": "https://avatars.githubusercontent.com/u/37184532?v=4", + "description": "Robust Chauvenet Rejection: RCR is advanced, but easy to use, outlier rejection.", "topics": [ - "enhanced-sampling", - "collective-variables", - "lammps", - "gromacs", - "hoomd-blue", - "scientific-machine-learning", - "qbox", - "miccom" + "outlier-rejection", + "outlier-detection", + "regression", + "robust", + "robust-statistics" ] }, { - "uid": "github/davidkipping/LDC3", - "url": "https://github.com/davidkipping/LDC3", - "rel": "/software/repository/github/davidkipping/LDC3", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/davidkipping/MACULA", - "url": "https://github.com/davidkipping/MACULA", - "rel": "/software/repository/github/davidkipping/MACULA", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "uid": "github/devosoft/avida", + "url": "https://github.com/devosoft/avida", + "rel": "/software/repository/github/devosoft/avida", + "avatar": "https://avatars.githubusercontent.com/u/468914?v=4", "description": null, - "topics": [] - }, - { - "uid": "github/davidkipping/ECCSAMPLES", - "url": "https://github.com/davidkipping/ECCSAMPLES", - "rel": "/software/repository/github/davidkipping/ECCSAMPLES", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", - "description": "Sample from an informative prior to enforce a realistic prior on parameters such as the orbital eccentricity of an extrasolar planet. This is done by evaluating the inverse cumulative density function of the prior distribution.", - "topics": [] + "topics": [ + "avida" + ] }, { - "uid": "github/davidkipping/inversebeta", - "url": "https://github.com/davidkipping/inversebeta", - "rel": "/software/repository/github/davidkipping/inversebeta", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", - "description": "Inverse transform sampler of the Beta distribution", - "topics": [] + "uid": "github/MingBit/PySCNet", + "url": "https://github.com/MingBit/PySCNet", + "rel": "/software/repository/github/MingBit/PySCNet", + "avatar": "https://avatars.githubusercontent.com/u/22442392?v=4", + "description": "A python package for single cell network analysis", + "topics": [ + "single-cell", + "network-analysis", + "docker" + ] }, { - "uid": "github/davidkipping/flicker", - "url": "https://github.com/davidkipping/flicker", - "rel": "/software/repository/github/davidkipping/flicker", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "uid": "github/RelNucAs/bns_nurates", + "url": "https://github.com/RelNucAs/bns_nurates", + "rel": "/software/repository/github/RelNucAs/bns_nurates", + "avatar": "https://avatars.githubusercontent.com/u/108818779?v=4", "description": null, "topics": [] }, { - "uid": "github/davidkipping/MAH", - "url": "https://github.com/davidkipping/MAH", - "rel": "/software/repository/github/davidkipping/MAH", - "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", - "description": "Calculate the posterior distribution of the \"minimum atmospheric height\" (MAH) of an exoplanet by inputting the joint posterior distribution of the mass and radius.", - "topics": [] + "uid": "github/MOSAICS-NIH/MOSAICS", + "url": "https://github.com/MOSAICS-NIH/MOSAICS", + "rel": "/software/repository/github/MOSAICS-NIH/MOSAICS", + "avatar": "https://avatars.githubusercontent.com/u/113941588?v=4", + "description": "A collection of tools for characterizing membrane structure and dynamics within simulated trajectories of molecular systems.", + "topics": [ + "biophysics", + "dynamics", + "grid", + "lattice", + "lipids", + "membrane", + "mosaics", + "simulations", + "structure", + "nih" + ] }, { - "uid": "github/rnikutta/rhocube", - "url": "https://github.com/rnikutta/rhocube", - "rel": "/software/repository/github/rnikutta/rhocube", - "avatar": "https://avatars.githubusercontent.com/u/7537690?v=4", - "description": "Compute 3D density models, and integrate over dz if requested", + "uid": "github/purmortal/galcraft", + "url": "https://github.com/purmortal/galcraft", + "rel": "/software/repository/github/purmortal/galcraft", + "avatar": "https://avatars.githubusercontent.com/u/53634598?v=4", + "description": "Mocking IFS data cube of the Milky Way", "topics": [] }, { - "uid": "github/miRTop/mirtop", - "url": "https://github.com/miRTop/mirtop", - "rel": "/software/repository/github/miRTop/mirtop", - "avatar": "https://avatars.githubusercontent.com/u/15463928?v=4", - "description": "command lines tool to annotate miRNAs with a standard mirna/isomir naming", + "uid": "github/aritraghsh09/GaMorNet", + "url": "https://github.com/aritraghsh09/GaMorNet", + "rel": "/software/repository/github/aritraghsh09/GaMorNet", + "avatar": "https://avatars.githubusercontent.com/u/6251857?v=4", + "description": "GaMorNet is a CNN based on AlexNet to classify galaxies morphologically", "topics": [ - "mirna", - "isomirs", - "formatter", - "gff", - "smallrna-seq" + "astrophysics", + "astronomy", + "galaxies", + "convolutional-neural-networks", + "tflearn", + "tensorflow", + "morphological-analysis", + "machine-learning", + "neural-networks", + "sdss", + "candels" ] }, { - "uid": "github/sambit-giri/BCemu", - "url": "https://github.com/sambit-giri/BCemu", - "rel": "/software/repository/github/sambit-giri/BCemu", - "avatar": "https://avatars.githubusercontent.com/u/16431442?v=4", - "description": null, - "topics": [] + "uid": "github/aritraghsh09/GaMPEN", + "url": "https://github.com/aritraghsh09/GaMPEN", + "rel": "/software/repository/github/aritraghsh09/GaMPEN", + "avatar": "https://avatars.githubusercontent.com/u/6251857?v=4", + "description": "ML framework to estimate Bayesian posteriors of galaxy morphological parameters", + "topics": [ + "astrophysics", + "deep-neural-networks", + "galaxy-morphology", + "pytorch", + "spatial-transformer-networks", + "uncertainty-neural-networks" + ] }, { - "uid": "github/sambit-giri/tools21cm", - "url": "https://github.com/sambit-giri/tools21cm", - "rel": "/software/repository/github/sambit-giri/tools21cm", - "avatar": "https://avatars0.githubusercontent.com/u/16431442?v=4", + "uid": "github/lijing28101/maize_pyrpipe", + "url": "https://github.com/lijing28101/maize_pyrpipe", + "rel": "/software/repository/github/lijing28101/maize_pyrpipe", + "avatar": "https://avatars.githubusercontent.com/u/22349573?v=4", "description": null, "topics": [] }, { - "uid": "github/sambit-giri/BCMemu", - "url": "https://github.com/sambit-giri/BCMemu", - "rel": "/software/repository/github/sambit-giri/BCMemu", - "avatar": "https://avatars.githubusercontent.com/u/16431442?v=4", - "description": null, + "uid": "github/ashleefv/ACEInhibPKPD", + "url": "https://github.com/ashleefv/ACEInhibPKPD", + "rel": "/software/repository/github/ashleefv/ACEInhibPKPD", + "avatar": "https://avatars.githubusercontent.com/u/12647990?v=4", + "description": "PKPD model for ACE inhibition; educational drug dosing app for treatment of high blood pressure", "topics": [] }, { - "uid": "github/sheryl-ai/MetaPred", - "url": "https://github.com/sheryl-ai/MetaPred", - "rel": "/software/repository/github/sheryl-ai/MetaPred", - "avatar": "https://avatars.githubusercontent.com/u/28990004?v=4", - "description": "MetaPred: Meta-Learning for Clinical Risk Prediction with Limited Patient Electronic Health Records (KDD 2019)", - "topics": [ - "meta-learning" - ] - }, - { - "uid": "github/YuRui8879/MRASleepNet", - "url": "https://github.com/YuRui8879/MRASleepNet", - "rel": "/software/repository/github/YuRui8879/MRASleepNet", - "avatar": "https://avatars.githubusercontent.com/u/46178344?v=4", - "description": null, + "uid": "github/Jashcraf/katsu", + "url": "https://github.com/Jashcraf/katsu", + "rel": "/software/repository/github/Jashcraf/katsu", + "avatar": "https://avatars.githubusercontent.com/u/25557892?v=4", + "description": "Polarimetric Data Reduction and machine control for measuring the polarization of observatories", "topics": [] }, { - "uid": "github/JGCRI/osiris", - "url": "https://github.com/JGCRI/osiris", - "rel": "/software/repository/github/JGCRI/osiris", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Processes climate impacts on agricultural yields for GCAM", + "uid": "github/Jashcraf/poke", + "url": "https://github.com/Jashcraf/poke", + "rel": "/software/repository/github/Jashcraf/poke", + "avatar": "https://avatars.githubusercontent.com/u/25557892?v=4", + "description": "Poke (pronounced poh-keh) is a Polarization Ray Tracing and Gaussian Beamlet module for Python", "topics": [] }, { - "uid": "github/JGCRI/gaia", - "url": "https://github.com/JGCRI/gaia", - "rel": "/software/repository/github/JGCRI/gaia", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "gaia is an empirical econometric model designed to estimate annual crop yield responses to climate impacts.", + "uid": "github/sinc-lab/miRe2e", + "url": "https://github.com/sinc-lab/miRe2e", + "rel": "/software/repository/github/sinc-lab/miRe2e", + "avatar": "https://avatars.githubusercontent.com/u/44381855?v=4", + "description": null, "topics": [] }, { - "uid": "github/JGCRI/HELPS", - "url": "https://github.com/JGCRI/HELPS", - "rel": "/software/repository/github/JGCRI/HELPS", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Explore future Heat Effects on Labor Productivity by Sector", + "uid": "github/ska-sa/hibayes", + "url": "https://github.com/ska-sa/hibayes", + "rel": "/software/repository/github/ska-sa/hibayes", + "avatar": "https://avatars.githubusercontent.com/u/1210238?v=4", + "description": "Reverend 21 work", "topics": [] }, { - "uid": "github/JGCRI/rfasst", - "url": "https://github.com/JGCRI/rfasst", - "rel": "/software/repository/github/JGCRI/rfasst", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Estimation of a consistent range of adverse health and agricultural effects attributable to air pollution for a GCAM scenario", + "uid": "github/ska-sa/katdal", + "url": "https://github.com/ska-sa/katdal", + "rel": "/software/repository/github/ska-sa/katdal", + "avatar": "https://avatars.githubusercontent.com/u/1210238?v=4", + "description": "Data access library for the MeerKAT radio telescope", "topics": [] }, { - "uid": "github/JGCRI/tethys", - "url": "https://github.com/JGCRI/tethys", - "rel": "/software/repository/github/JGCRI/tethys", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Spatiotemporal downscaling model for global water use", - "topics": [ - "gcims", - "gcam" - ] + "uid": "github/snakesonabrain/groundhog", + "url": "https://github.com/snakesonabrain/groundhog", + "rel": "/software/repository/github/snakesonabrain/groundhog", + "avatar": "https://avatars.githubusercontent.com/u/26286969?v=4", + "description": "Groundhog, a general-purpose geotechnical library", + "topics": [] }, { - "uid": "github/JGCRI/rmap", - "url": "https://github.com/JGCRI/rmap", - "rel": "/software/repository/github/JGCRI/rmap", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Mapping software with pre-loaded global and local maps", + "uid": "github/Gaiana/nirdust", + "url": "https://github.com/Gaiana/nirdust", + "rel": "/software/repository/github/Gaiana/nirdust", + "avatar": "https://avatars.githubusercontent.com/u/71792014?v=4", + "description": "Nirdust is a python package that uses K-band (2.2 micrometers) spectra to measure the temperature of the dust heated by a type 2 Active Galactic Nuclei (AGN) accretion disk.", "topics": [ - "mapping", - "maps" + "spectra", + "dust", + "agn", + "astronomy", + "galaxies" ] }, { - "uid": "github/JGCRI/gcamfaostat", - "url": "https://github.com/JGCRI/gcamfaostat", - "rel": "/software/repository/github/JGCRI/gcamfaostat", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "An R package to prepare, process, and synthesize FAOSTAT data for global agroeconomic and multisector dynamic modeling", + "uid": "github/dsavransky/EXOSIMS", + "url": "https://github.com/dsavransky/EXOSIMS", + "rel": "/software/repository/github/dsavransky/EXOSIMS", + "avatar": "https://avatars.githubusercontent.com/u/4950841?v=4", + "description": "Simulator for exoplanet direct imaging space missions", "topics": [] }, { - "uid": "github/JGCRI/stitches", - "url": "https://github.com/JGCRI/stitches", - "rel": "/software/repository/github/JGCRI/stitches", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "Amalgamate existing climate data to create monthly climate variable fields.", + "uid": "github/gpantel/MolPainter", + "url": "https://github.com/gpantel/MolPainter", + "rel": "/software/repository/github/gpantel/MolPainter", + "avatar": "https://avatars.githubusercontent.com/u/5740723?v=4", + "description": "A Tool for Drawing Complex Planar Molecular Systems of Arbitrary Composition and Placement", "topics": [] }, { - "uid": "github/JGCRI/ambrosia", - "url": "https://github.com/JGCRI/ambrosia", - "rel": "/software/repository/github/JGCRI/ambrosia", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": "An R package for calculating and analyzing food demand and in accordance with the Edmonds et al food demand model", + "uid": "github/merenlab/anvio", + "url": "https://github.com/merenlab/anvio", + "rel": "/software/repository/github/merenlab/anvio", + "avatar": "https://avatars.githubusercontent.com/u/22106511?v=4", + "description": "An analysis and visualization platform for 'omics data", "topics": [ - "economics", - "food-security", - "scientific-computing" + "metagenomics", + "metatranscriptomics", + "pangenomics", + "comparative-genomics", + "science", + "visualization", + "bioinformatics", + "phylogenomics", + "population-genetics", + "python", + "javascript", + "anvio" ] }, { - "uid": "github/JGCRI/plutus", - "url": "https://github.com/JGCRI/plutus", - "rel": "/software/repository/github/JGCRI/plutus", - "avatar": "https://avatars.githubusercontent.com/u/8431983?v=4", - "description": null, - "topics": [] + "uid": "github/BobChallen/Basic-mzml-plotter", + "url": "https://github.com/BobChallen/Basic-mzml-plotter", + "rel": "/software/repository/github/BobChallen/Basic-mzml-plotter", + "avatar": "https://avatars.githubusercontent.com/u/122879668?v=4", + "description": "A very basic mzml file plotting program that can plot single scans, merge all scans from a file, plot the TIC, and plot an EIC of a chosen m/z value.", + "topics": [ + "mass-spectrometry", + "massspectrometry", + "mzml", + "mzml-files", + "plotting-in-python" + ] }, { - "uid": "github/fstrozzi/Fastool", - "url": "https://github.com/fstrozzi/Fastool", - "rel": "/software/repository/github/fstrozzi/Fastool", - "avatar": "https://avatars.githubusercontent.com/u/16617?v=4", - "description": "Simple and quick FastQ and FastA tool for file reading and conversion", + "uid": "github/PENTACLE-Team/PENTACLE", + "url": "https://github.com/PENTACLE-Team/PENTACLE", + "rel": "/software/repository/github/PENTACLE-Team/PENTACLE", + "avatar": "https://avatars.githubusercontent.com/u/23567420?v=4", + "description": null, "topics": [] }, { - "uid": "github/muttenthalerlab/PeptideMiner", - "url": "https://github.com/muttenthalerlab/PeptideMiner", - "rel": "/software/repository/github/muttenthalerlab/PeptideMiner", - "avatar": "https://avatars.githubusercontent.com/u/177279911?v=4", + "uid": "github/AlidesChimin/SATA", + "url": "https://github.com/AlidesChimin/SATA", + "rel": "/software/repository/github/AlidesChimin/SATA", + "avatar": "https://avatars.githubusercontent.com/u/172922030?v=4", "description": null, "topics": [] }, { - "uid": "github/chervias/DustFilaments", - "url": "https://github.com/chervias/DustFilaments", - "rel": "/software/repository/github/chervias/DustFilaments", - "avatar": "https://avatars.githubusercontent.com/u/22419110?v=4", - "description": "Paint filaments to produce a thermal dust full sky map at mm frequencies", - "topics": [ - "cosmology", - "planck", - "dust", - "microwave" - ] + "uid": "github/baptklein/ATMOSPHERIX_DATA_RED", + "url": "https://github.com/baptklein/ATMOSPHERIX_DATA_RED", + "rel": "/software/repository/github/baptklein/ATMOSPHERIX_DATA_RED", + "avatar": "https://avatars.githubusercontent.com/u/57224454?v=4", + "description": null, + "topics": [] }, { - "uid": "github/martinjzhang/scDRS", - "url": "https://github.com/martinjzhang/scDRS", - "rel": "/software/repository/github/martinjzhang/scDRS", - "avatar": "https://avatars.githubusercontent.com/u/27316293?v=4", - "description": "Single-cell disease relevance score (scDRS)", + "uid": "github/niosh-mining/obsplus", + "url": "https://github.com/niosh-mining/obsplus", + "rel": "/software/repository/github/niosh-mining/obsplus", + "avatar": "https://avatars.githubusercontent.com/u/32000029?v=4", + "description": "A Pandas-Centric ObsPy Expansion Pack", "topics": [ - "cell-state", - "gwas", - "single-cell-rna-seq", - "diseases-and-complex-traits", - "within-cell-type-heterogeneity" + "seismology", + "pandas" ] }, { - "uid": "github/markblokpoel/mathlib", - "url": "https://github.com/markblokpoel/mathlib", - "rel": "/software/repository/github/markblokpoel/mathlib", - "avatar": "https://avatars.githubusercontent.com/u/35800854?v=4", - "description": null, + "uid": "github/OliverFHD/GPUniverse", + "url": "https://github.com/OliverFHD/GPUniverse", + "rel": "/software/repository/github/OliverFHD/GPUniverse", + "avatar": "https://avatars.githubusercontent.com/u/16794844?v=4", + "description": "Modelling holographic quantum fields in finite dimensional Hilbert spaces with Generalised Pauli Operators (GPOs) and overlapping degrees of freedom. Also: simulate overlapping qubits with GPUs.", "topics": [] }, { - "uid": "github/ianfhunter/GNOLL", - "url": "https://github.com/ianfhunter/GNOLL", - "rel": "/software/repository/github/ianfhunter/GNOLL", - "avatar": "https://avatars.githubusercontent.com/u/1540737?v=4", - "description": "GNOLL is an efficient dice notation parser for multiple programming languages that supports a wide set of dice notation", + "uid": "github/savage13/sacio", + "url": "https://github.com/savage13/sacio", + "rel": "/software/repository/github/savage13/sacio", + "avatar": "https://avatars.githubusercontent.com/u/126514?v=4", + "description": "sacio library", "topics": [ - "dice", - "dice-roller", - "dice-notation", - "board-game", - "c", - "cpp", - "dice-rolls", - "python", - "roleplaying-games", - "ttrpg", - "perl", - "golang", - "javascript", - "go", - "js", - "rpg-dice-roller", - "julia", - "r", - "java", - "haskell" + "sac", + "iris", + "sacio-library", + "seismic" ] }, { - "uid": "github/ants-project/ANTs", - "url": "https://github.com/ants-project/ANTs", - "rel": "/software/repository/github/ants-project/ANTs", - "avatar": "https://avatars.githubusercontent.com/u/54352578?v=4", - "description": null, - "topics": [] + "uid": "github/changhoonhahn/pySpectrum", + "url": "https://github.com/changhoonhahn/pySpectrum", + "rel": "/software/repository/github/changhoonhahn/pySpectrum", + "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", + "description": "python package to measure power spectrum and bispectrum", + "topics": [ + "cosmology", + "astrostatistics" + ] }, { - "uid": "github/SpyDust/SpyDust", - "url": "https://github.com/SpyDust/SpyDust", - "rel": "/software/repository/github/SpyDust/SpyDust", - "avatar": "https://avatars.githubusercontent.com/u/187758865?v=4", - "description": "An improved implementation of SPDust for modeling spinning dust radiation", + "uid": "github/changhoonhahn/provabgs", + "url": "https://github.com/changhoonhahn/provabgs", + "rel": "/software/repository/github/changhoonhahn/provabgs", + "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", + "description": "PRObabilistic Value-Added Bright Galaxy Survey (PROVABGS)", "topics": [] }, { - "uid": "github/alejostark/phase_space_cosmo_fisher", - "url": "https://github.com/alejostark/phase_space_cosmo_fisher", - "rel": "/software/repository/github/alejostark/phase_space_cosmo_fisher", - "avatar": "https://avatars.githubusercontent.com/u/5475327?v=4", - "description": "Code used to produce Fisher matrix contours in Stark, Miller Huterer 2016", + "uid": "github/changhoonhahn/haloflow", + "url": "https://github.com/changhoonhahn/haloflow", + "rel": "/software/repository/github/changhoonhahn/haloflow", + "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", + "description": "Simulation-Based Inference (SBI) using forward modeled galaxy photometry", "topics": [] }, { - "uid": "github/SPARC-FAIR-Codeathon/aqua", - "url": "https://github.com/SPARC-FAIR-Codeathon/aqua", - "rel": "/software/repository/github/SPARC-FAIR-Codeathon/aqua", - "avatar": "https://avatars.githubusercontent.com/u/86933347?v=4", - "description": "Advanced Query Architecture for the SPARC Portal.", + "uid": "github/dkirkby/gphist", + "url": "https://github.com/dkirkby/gphist", + "rel": "/software/repository/github/dkirkby/gphist", + "avatar": "https://avatars.githubusercontent.com/u/185007?v=4", + "description": "Cosmological expansion history inference using Gaussian processes", "topics": [ - "nlp", - "search-engine", + "cosmology", "machine-learning", - "hackathon", - "scigraph", - "docker" + "gaussian-processes" ] }, { - "uid": "github/mkunimoto/LEO-vetter", - "url": "https://github.com/mkunimoto/LEO-vetter", - "rel": "/software/repository/github/mkunimoto/LEO-vetter", - "avatar": "https://avatars.githubusercontent.com/u/33587249?v=4", - "description": "Automated vetting for TESS planet candidates", - "topics": [] - }, - { - "uid": "github/libdynd/dynd-python", - "url": "https://github.com/libdynd/dynd-python", - "rel": "/software/repository/github/libdynd/dynd-python", - "avatar": "https://avatars1.githubusercontent.com/u/10065955?v=4", - "description": "Python exposure of dynd", - "topics": [] + "uid": "github/musoke/ultradark.jl", + "url": "https://github.com/musoke/UltraDark.jl", + "rel": "/software/repository/github/musoke/ultradark.jl", + "avatar": "https://avatars.githubusercontent.com/u/16665084?v=4", + "description": "Simulations of cosmological scalar fields", + "topics": [ + "cosmology", + "julia", + "dark-matter", + "reheating", + "scalar-dark-matter" + ] }, { - "uid": "github/PhenoApps/Coordinate", - "url": "https://github.com/PhenoApps/Coordinate", - "rel": "/software/repository/github/PhenoApps/Coordinate", - "avatar": "https://avatars.githubusercontent.com/u/28616659?v=4", - "description": null, - "topics": [] + "uid": "github/musoke/UltraDark.jl", + "url": "https://github.com/musoke/UltraDark.jl", + "rel": "/software/repository/github/musoke/UltraDark.jl", + "avatar": "https://avatars.githubusercontent.com/u/16665084?v=4", + "description": "Simulations of cosmological scalar fields", + "topics": [ + "cosmology", + "julia" + ] }, { - "uid": "github/rribeiro-sci/pygomodo", - "url": "https://github.com/rribeiro-sci/pygomodo", - "rel": "/software/repository/github/rribeiro-sci/pygomodo", - "avatar": "https://avatars.githubusercontent.com/u/33298926?v=4", - "description": "GPCRs modeling and docking with python", + "uid": "github/nuc-astro/winnet", + "url": "https://github.com/nuc-astro/WinNet", + "rel": "/software/repository/github/nuc-astro/winnet", + "avatar": "https://avatars.githubusercontent.com/u/35767561?v=4", + "description": "The WinNet nuclear reaction network", "topics": [ - "bioinformatics", - "bioinformatics-pipeline", - "bioinformatics-tool", - "gpcr", - "homology-modeling", - "molecular-docking" + "astrophysics", + "codes", + "nuclear-physics" ] }, { - "uid": "github/ukoethe/vigra", - "url": "https://github.com/ukoethe/vigra", - "rel": "/software/repository/github/ukoethe/vigra", - "avatar": "https://avatars.githubusercontent.com/u/897680?v=4", - "description": "a generic C++ library for image analysis", + "uid": "github/PapenfussLab/gridss", + "url": "https://github.com/PapenfussLab/gridss", + "rel": "/software/repository/github/PapenfussLab/gridss", + "avatar": "https://avatars.githubusercontent.com/u/13462296?v=4", + "description": "GRIDSS: the Genomic Rearrangement IDentification Software Suite", "topics": [] }, { - "uid": "github/jkrogager/VoigtFit", - "url": "https://github.com/jkrogager/VoigtFit", - "rel": "/software/repository/github/jkrogager/VoigtFit", - "avatar": "https://avatars.githubusercontent.com/u/23232265?v=4", - "description": "Python code to fit absorption lines semi-interactively", + "uid": "github/pyro-kinetics/pyrokinetics", + "url": "https://github.com/pyro-kinetics/pyrokinetics", + "rel": "/software/repository/github/pyro-kinetics/pyrokinetics", + "avatar": "https://avatars.githubusercontent.com/u/84965465?v=4", + "description": "Python library to run and analyse gyrokinetics simulations", "topics": [] }, { - "uid": "github/bow/crimson", - "url": "https://github.com/bow/crimson", - "rel": "/software/repository/github/bow/crimson", - "avatar": "https://avatars.githubusercontent.com/u/343998?v=4", - "description": "Bioinformatics tool outputs converter to JSON or YAML", + "uid": "github/illumina/pyflow", + "url": "https://github.com/Illumina/pyflow", + "rel": "/software/repository/github/illumina/pyflow", + "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", + "description": "A lightweight parallel task engine", "topics": [ - "bioinformatics", - "json", - "yaml", - "converter" + "workflow", + "workflow-engine", + "task-runner" ] }, { - "uid": "github/bow/fsnviz", - "url": "https://github.com/bow/fsnviz", - "rel": "/software/repository/github/bow/fsnviz", - "avatar": "https://avatars.githubusercontent.com/u/343998?v=4", - "description": "Tool for plotting gene fusion events using Circos.", + "uid": "github/tidymodels/stacks", + "url": "https://github.com/tidymodels/stacks", + "rel": "/software/repository/github/tidymodels/stacks", + "avatar": "https://avatars.githubusercontent.com/u/29100987?v=4", + "description": "An R package for tidy stacked ensemble modeling", "topics": [] }, { - "uid": "github/fkeruzore/picasso", - "url": "https://github.com/fkeruzore/picasso", - "rel": "/software/repository/github/fkeruzore/picasso", - "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", - "description": "Painting intracluster gas on gravity-only simulations, using JAX and flax", + "uid": "github/tidymodels/infer", + "url": "https://github.com/tidymodels/infer", + "rel": "/software/repository/github/tidymodels/infer", + "avatar": "https://avatars.githubusercontent.com/u/29100987?v=4", + "description": "An R package for tidyverse-friendly statistical inference", "topics": [] }, { - "uid": "github/fkeruzore/panco2", - "url": "https://github.com/fkeruzore/panco2", - "rel": "/software/repository/github/fkeruzore/panco2", - "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", - "description": "A Python library for pressure profile measurements in SZ observations of galaxy clusters.", - "topics": [] + "uid": "github/tlverse/hal9001", + "url": "https://github.com/tlverse/hal9001", + "rel": "/software/repository/github/tlverse/hal9001", + "avatar": "https://avatars0.githubusercontent.com/u/36939258?v=4", + "description": "\ud83e\udd20 \ud83d\udcff The Highly Adaptive Lasso", + "topics": [ + "machine-learning-algorithms", + "nonparametric-regression", + "cross-validation", + "lasso-regression" + ] }, { - "uid": "github/fkeruzore/halox", - "url": "https://github.com/fkeruzore/halox", - "rel": "/software/repository/github/fkeruzore/halox", - "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", - "description": "Dark matter halo properties and halo mass functions using JAX", + "uid": "github/microplastics-cluster/fragment-mnp", + "url": "https://github.com/microplastics-cluster/fragment-mnp", + "rel": "/software/repository/github/microplastics-cluster/fragment-mnp", + "avatar": "https://avatars.githubusercontent.com/u/99332985?v=4", + "description": "Model of Micro and NanoPlastic FRAGMentation in the ENvironmenT", "topics": [] }, { - "uid": "github/tschad/pycelp", - "url": "https://github.com/tschad/pycelp", - "rel": "/software/repository/github/tschad/pycelp", - "avatar": "https://avatars.githubusercontent.com/u/13107102?v=4", - "description": "a Python package for Coronal Emission Line Polarization ", + "uid": "github/NiallJeffrey/DeepMass", + "url": "https://github.com/NiallJeffrey/DeepMass", + "rel": "/software/repository/github/NiallJeffrey/DeepMass", + "avatar": "https://avatars.githubusercontent.com/u/15345794?v=4", + "description": "Cosmological map inference with deep learning", + "topics": [ + "deep-learning", + "tensorflow", + "python", + "cosmology" + ] + }, + { + "uid": "github/NiallJeffrey/BornRaytrace", + "url": "https://github.com/NiallJeffrey/BornRaytrace", + "rel": "/software/repository/github/NiallJeffrey/BornRaytrace", + "avatar": "https://avatars.githubusercontent.com/u/15345794?v=4", + "description": "BornRaytrace: simulating weak gravitational lensing effects", "topics": [] }, { - "uid": "github/StevenGolovkine/FDApy", - "url": "https://github.com/StevenGolovkine/FDApy", - "rel": "/software/repository/github/StevenGolovkine/FDApy", - "avatar": "https://avatars.githubusercontent.com/u/22517192?v=4", - "description": "Python Package for Functional Data Analysis", + "uid": "github/rainwoodman/bigfile", + "url": "https://github.com/rainwoodman/bigfile", + "rel": "/software/repository/github/rainwoodman/bigfile", + "avatar": "https://avatars.githubusercontent.com/u/138060?v=4", + "description": "A reproducible massively parallel IO library for hierarchical data", "topics": [] }, { - "uid": "github/xfengnefx/hifiasm-meta", - "url": "https://github.com/xfengnefx/hifiasm-meta", - "rel": "/software/repository/github/xfengnefx/hifiasm-meta", - "avatar": "https://avatars.githubusercontent.com/u/61363437?v=4", - "description": "hifiasm_meta - de novo metagenome assembler, based on hifiasm, a haplotype-resolved de novo assembler for PacBio Hifi reads.", + "uid": "github/rainwoodman/kdcount", + "url": "https://github.com/rainwoodman/kdcount", + "rel": "/software/repository/github/rainwoodman/kdcount", + "avatar": "https://avatars.githubusercontent.com/u/138060?v=4", + "description": "KDTree for low dimensional spatial indexing, a Python extension", "topics": [] }, { - "uid": "github/AtrCheema/SeqMetrics", - "url": "https://github.com/AtrCheema/SeqMetrics", - "rel": "/software/repository/github/AtrCheema/SeqMetrics", - "avatar": "https://avatars.githubusercontent.com/u/25817388?v=4", - "description": "Various errors for tabular/structured/time-series data", + "uid": "github/bethgelab/foolbox", + "url": "https://github.com/bethgelab/foolbox", + "rel": "/software/repository/github/bethgelab/foolbox", + "avatar": "https://avatars2.githubusercontent.com/u/7590370?v=4", + "description": "A Python toolbox to create adversarial examples that fool neural networks in PyTorch, TensorFlow, and JAX", "topics": [ - "performance-metrics", - "errors", - "score", - "loss" + "adversarial-examples", + "machine-learning", + "python", + "adversarial-attacks", + "pytorch", + "tensorflow", + "jax", + "keras" ] }, { - "uid": "github/JD2112/methylr", - "url": "https://github.com/JD2112/methylr", - "rel": "/software/repository/github/JD2112/methylr", - "avatar": "https://avatars.githubusercontent.com/u/15922543?v=4", - "description": "methylR: a single shiny solution from sequencer data to pathway analysis", - "topics": [ - "r", - "shiny-apps", - "dna-methylation", - "docker-container", - "documentation", - "illumina", - "testdata", - "web-server" - ] + "uid": "github/alexdobin/STAR", + "url": "https://github.com/alexdobin/STAR", + "rel": "/software/repository/github/alexdobin/STAR", + "avatar": "https://avatars.githubusercontent.com/u/6960419?v=4", + "description": "RNA-seq aligner", + "topics": [] }, { - "uid": "github/JD2112/TwistMethylFlow", - "url": "https://github.com/JD2112/TwistMethylFlow", - "rel": "/software/repository/github/JD2112/TwistMethylFlow", - "avatar": "https://avatars.githubusercontent.com/u/15922543?v=4", - "description": "A NextFlow pipeline for Twist NGS DNA Methylation data analysis", - "topics": [ - "dna", - "dna-methylation", - "docker", - "nextflow", - "singularity", - "twist" - ] + "uid": "github/SWIFTSIM/emulator", + "url": "https://github.com/SWIFTSIM/emulator", + "rel": "/software/repository/github/SWIFTSIM/emulator", + "avatar": "https://avatars.githubusercontent.com/u/37541309?v=4", + "description": "The SWIFT simulation cosmological emulator (swift-emulator)", + "topics": [] }, { - "uid": "github/hombit/freddi", - "url": "https://github.com/hombit/freddi", - "rel": "/software/repository/github/hombit/freddi", - "avatar": "https://avatars.githubusercontent.com/u/1784493?v=4", - "description": "Compute FRED light curves of LMXBs outbursts", + "uid": "github/SWIFTSIM/SOAP", + "url": "https://github.com/SWIFTSIM/SOAP", + "rel": "/software/repository/github/SWIFTSIM/SOAP", + "avatar": "https://avatars.githubusercontent.com/u/37541309?v=4", + "description": "Spherical Overdensity Aperture Processor: MPI parallel Python code to compute properties of halos in SWIFT n-body simulations", "topics": [ - "accretion-disks", - "astrophysics", - "x-ray-binaries", - "fred", - "science", - "lmxb" + "simulation", + "galaxy-evolution", + "halo-finding", + "nbody", + "cosmology" ] }, { - "uid": "github/abonaldi/TRECS", - "url": "https://github.com/abonaldi/TRECS", - "rel": "/software/repository/github/abonaldi/TRECS", - "avatar": "https://avatars.githubusercontent.com/u/29225487?v=4", - "description": "This repository contains the code used to produce the Tiered Radio Extragalactic Continuum Simulation (T-RECS, Bonaldi et al. 2018)", + "uid": "github/utpal-singh/SAnTex", + "url": "https://github.com/utpal-singh/SAnTex", + "rel": "/software/repository/github/utpal-singh/SAnTex", + "avatar": "https://avatars.githubusercontent.com/u/63436627?v=4", + "description": null, "topics": [] }, { - "uid": "github/SchedMD/slurm", - "url": "https://github.com/SchedMD/slurm", - "rel": "/software/repository/github/SchedMD/slurm", - "avatar": "https://avatars1.githubusercontent.com/u/740245?v=4", - "description": "Slurm: A Highly Scalable Workload Manager", + "uid": "github/alexfields/ORF-RATER", + "url": "https://github.com/alexfields/ORF-RATER", + "rel": "/software/repository/github/alexfields/ORF-RATER", + "avatar": "https://avatars.githubusercontent.com/u/5758587?v=4", + "description": "Regression-based annotation of protein-coding sequences from ribosome profiling data", "topics": [] }, { - "uid": "github/jendelel/PrankWebApp", - "url": "https://github.com/jendelel/PrankWebApp", - "rel": "/software/repository/github/jendelel/PrankWebApp", - "avatar": "https://avatars0.githubusercontent.com/u/16251857?v=4", - "description": "Web application for protein-ligand binding sites analysis and visualization", + "uid": "github/OpenMDAO/dymos", + "url": "https://github.com/OpenMDAO/dymos", + "rel": "/software/repository/github/OpenMDAO/dymos", + "avatar": "https://avatars.githubusercontent.com/u/861615?v=4", + "description": "Open Source Optimization of Dynamic Multidisciplinary Systems", "topics": [ - "protein-ligand-interactions", - "web-application", - "protein-homology", - "visualization", - "protein", - "conservation", - "web", - "webapp", - "ligand", - "protein-structure", - "protein-sequence", - "pdb", - "conservation-scores", - "analyses" + "nasa", + "optimal-control", + "trajectory-optimization", + "pseudospectral", + "openmdao", + "co-design" ] }, { - "uid": "github/ConnorStoneAstro/AutoProf", - "url": "https://github.com/ConnorStoneAstro/AutoProf", - "rel": "/software/repository/github/ConnorStoneAstro/AutoProf", - "avatar": "https://avatars.githubusercontent.com/u/78555321?v=4", - "description": "Automatic Isophotal solutions for galaxy images", + "uid": "github/edwardoughton/itmlogic", + "url": "https://github.com/edwardoughton/itmlogic", + "rel": "/software/repository/github/edwardoughton/itmlogic", + "avatar": "https://avatars0.githubusercontent.com/u/11899151?v=4", + "description": "Longley-Rice Irregular Terrain Model (itmlogic)", "topics": [] }, { - "uid": "github/AMSSwanglab/SpecVar", - "url": "https://github.com/AMSSwanglab/SpecVar", - "rel": "/software/repository/github/AMSSwanglab/SpecVar", - "avatar": "https://avatars.githubusercontent.com/u/44538141?v=4", - "description": "SpecVar is a convenient tool for estimating interpretable genetic correlation of human complex traits and annotating the SNPs with context specific regulatory networks", - "topics": [ - "gwas", - "regulatory-networks", - "variant-interpretation", - "phenotopic-correlation", - "relevant-tissue" - ] + "uid": "github/elkebir-group/derna", + "url": "https://github.com/elkebir-group/derna", + "rel": "/software/repository/github/elkebir-group/derna", + "avatar": "https://avatars.githubusercontent.com/u/37197144?v=4", + "description": "RNA sequence design for a target protein sequence", + "topics": [] }, { - "uid": "github/AMSSwanglab/RE-GOA", - "url": "https://github.com/AMSSwanglab/RE-GOA", - "rel": "/software/repository/github/AMSSwanglab/RE-GOA", - "avatar": "https://avatars.githubusercontent.com/u/44538141?v=4", - "description": "A tool for non-coding genomic regions function enrichment analysis based on Regulatory Elements Gene Ontology Annotation (RE-GOA)", - "topics": [ - "gene-ontology", - "network-embedding", - "regulatory-elements" - ] + "uid": "github/elkebir-group/Jumper", + "url": "https://github.com/elkebir-group/Jumper", + "rel": "/software/repository/github/elkebir-group/Jumper", + "avatar": "https://avatars.githubusercontent.com/u/37197144?v=4", + "description": "Discontinuous Transcript Assembly in Nidovirales", + "topics": [] }, { - "uid": "github/santeripuranen/SpydrPick", - "url": "https://github.com/santeripuranen/SpydrPick", - "rel": "/software/repository/github/santeripuranen/SpydrPick", - "avatar": "https://avatars.githubusercontent.com/u/26481940?v=4", - "description": "SpydrPick: mutual information based detection of pairs of genomic loci co-evolving under a shared selective pressure.", + "uid": "github/altjerue/paramo", + "url": "https://github.com/altjerue/paramo", + "rel": "/software/repository/github/altjerue/paramo", + "avatar": "https://avatars.githubusercontent.com/u/9192916?v=4", + "description": "Vine a Comala porque me dijeron que ac\u00e1 viv\u00eda mi padre, un tal Pedro P\u00e1ramo.", "topics": [] }, { - "uid": "github/KBNLresearch/ochre", - "url": "https://github.com/KBNLresearch/ochre", - "rel": "/software/repository/github/KBNLresearch/ochre", - "avatar": "https://avatars1.githubusercontent.com/u/3776439?v=4", - "description": "Toolbox for OCR post-correction", + "uid": "github/KerryAM-R/ggVolcanoR", + "url": "https://github.com/KerryAM-R/ggVolcanoR", + "rel": "/software/repository/github/KerryAM-R/ggVolcanoR", + "avatar": "https://avatars.githubusercontent.com/u/83262343?v=4", + "description": null, "topics": [] }, { - "uid": "github/soundata/soundata", - "url": "https://github.com/soundata/soundata", - "rel": "/software/repository/github/soundata/soundata", - "avatar": "https://avatars.githubusercontent.com/u/73146954?v=4", - "description": "Python library for downloading, loading & working with sound datasets", + "uid": "github/HUST-DataMan/FRMC", + "url": "https://github.com/HUST-DataMan/FRMC", + "rel": "/software/repository/github/HUST-DataMan/FRMC", + "avatar": "https://avatars.githubusercontent.com/u/75129706?v=4", + "description": "FRMC is a fast and robust imputation software for single cell RNA-Seq data.", + "topics": [] + }, + { + "uid": "github/BD2KGenomics/toil", + "url": "https://github.com/DataBiosphere/toil", + "rel": "/software/repository/github/BD2KGenomics/toil", + "avatar": "https://avatars.githubusercontent.com/u/32805087?v=4", + "description": "A scalable, efficient, cross-platform (Linux/macOS) and easy-to-use workflow engine in pure Python.", "topics": [ - "audio", + "cwl", "python", - "dataset", - "environmental-sound", - "bioacoustics", - "urban-sound" + "mesos", + "slurm", + "gridengine", + "workflow", + "pipeline", + "aws", + "common-workflow-language", + "kubernetes" ] }, { - "uid": "github/sdss/marvin", - "url": "https://github.com/sdss/marvin", - "rel": "/software/repository/github/sdss/marvin", - "avatar": "https://avatars.githubusercontent.com/u/22940388?v=4", - "description": "Data access and visualization for MaNGA. http://sdss-marvin.readthedocs.io/en/latest/", + "uid": "github/sib-swiss/pftools3", + "url": "https://github.com/sib-swiss/pftools3", + "rel": "/software/repository/github/sib-swiss/pftools3", + "avatar": "https://avatars.githubusercontent.com/u/17580039?v=4", + "description": "A suite of tools to build and search generalized profiles", "topics": [ - "astronomy", - "manga", - "marvin", - "sdss" + "profile", + "protein-domains", + "motif", + "sequence-analysis" ] }, { - "uid": "github/BlueBrain/BlueCelluLab", - "url": "https://github.com/BlueBrain/BlueCelluLab", - "rel": "/software/repository/github/BlueBrain/BlueCelluLab", - "avatar": "https://avatars.githubusercontent.com/u/1479142?v=4", - "description": "Biologically detailed neural network simulations and analysis API", + "uid": "github/sib-swiss/glittr", + "url": "https://github.com/sib-swiss/glittr", + "rel": "/software/repository/github/sib-swiss/glittr", + "avatar": "https://avatars.githubusercontent.com/u/17580039?v=4", + "description": "A web application for finding and comparing bioinformatics training materials on GitHub and GitLab", + "topics": [] + }, + { + "uid": "github/Acellera/htmd", + "url": "https://github.com/Acellera/htmd", + "rel": "/software/repository/github/Acellera/htmd", + "avatar": "https://avatars.githubusercontent.com/u/7776839?v=4", + "description": "HTMD: Programming Environment for Molecular Discovery", "topics": [ - "biology", - "brain", - "cell", - "neural-network", - "neuron", - "neuroscience", - "python", - "simulation", - "circuit", - "emodel", - "api", - "connection", - "network" + "molecular-simulations", + "drug-discovery", + "automate", + "htmd" ] }, { - "uid": "github/openmopac/MOPAC", - "url": "https://github.com/openmopac/mopac", - "rel": "/software/repository/github/openmopac/MOPAC", - "avatar": "https://avatars.githubusercontent.com/u/83091952?v=4", - "description": "Molecular Orbital PACkage", + "uid": "github/JanLeppert/GasChromatographySimulator.jl", + "url": "https://github.com/JanLeppert/GasChromatographySimulator.jl", + "rel": "/software/repository/github/JanLeppert/GasChromatographySimulator.jl", + "avatar": "https://avatars.githubusercontent.com/u/68964801?v=4", + "description": "A package for the simulation of gas chromatography (GC)", + "topics": [] + }, + { + "uid": "github/roualdes/bridgestan", + "url": "https://github.com/roualdes/bridgestan", + "rel": "/software/repository/github/roualdes/bridgestan", + "avatar": "https://avatars.githubusercontent.com/u/3252729?v=4", + "description": "BridgeStan provides efficient in-memory access through Python, Julia, and R to the methods of a Stan model.", "topics": [ - "quantum-chemistry", - "electronic-structure", - "molecular-orbital-theory", - "semiempirical-methods" + "c", + "cpp", + "julia", + "python", + "r", + "stan" ] }, { - "uid": "github/kowallus/mbgc", - "url": "https://github.com/kowallus/mbgc", - "rel": "/software/repository/github/kowallus/mbgc", - "avatar": "https://avatars.githubusercontent.com/u/6030543?v=4", - "description": "Multiple Bacteria Genome Compressor (MBGC)", + "uid": "github/FabioRigamonti/pyADfit", + "url": "https://github.com/FabioRigamonti/pyADfit", + "rel": "/software/repository/github/FabioRigamonti/pyADfit", + "avatar": "https://avatars.githubusercontent.com/u/65313023?v=4", + "description": "A nested sampling approach to QSO accretion disc fitting.", "topics": [] }, { - "uid": "github/BiocomputeLab/paraSBOLv", - "url": "https://github.com/BiocomputeLab/paraSBOLv", - "rel": "/software/repository/github/BiocomputeLab/paraSBOLv", - "avatar": "https://avatars.githubusercontent.com/u/13359083?v=4", - "description": "A lightweight Python library designed to simplify the development of tools that render SBOL Visual diagrams.", + "uid": "github/PolyChord/PolyChordLite", + "url": "https://github.com/PolyChord/PolyChordLite", + "rel": "/software/repository/github/PolyChord/PolyChordLite", + "avatar": "https://avatars.githubusercontent.com/u/38859081?v=4", + "description": "Public version of PolyChord: See polychord.co.uk for PolyChordPro", "topics": [ - "sbol", - "synbio", - "biodesign", - "sbolv", - "svg", - "sbol-visual" + "bayesian-inference", + "nested-sampling", + "astronomy", + "cosmology", + "particle-physics", + "sampling-methods", + "statistics", + "polychord", + "log-likelihood", + "mpi", + "posterior", + "openmpi", + "gfortran" ] }, { - "uid": "github/ArkajyotiSaha/RandomForestsGLS", - "url": "https://github.com/ArkajyotiSaha/RandomForestsGLS", - "rel": "/software/repository/github/ArkajyotiSaha/RandomForestsGLS", - "avatar": "https://avatars.githubusercontent.com/u/24556858?v=4", + "uid": "github/mranuraggarg/supernovae_classification", + "url": "https://github.com/mranuraggarg/supernovae_classification", + "rel": "/software/repository/github/mranuraggarg/supernovae_classification", + "avatar": "https://avatars.githubusercontent.com/u/66897782?v=4", + "description": "Classifying type Ia supernovae through their light curve using ML. ", + "topics": [] + }, + { + "uid": "github/computproteomics/ProteoMaker", + "url": "https://github.com/computproteomics/ProteoMaker", + "rel": "/software/repository/github/computproteomics/ProteoMaker", + "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", "description": null, "topics": [] }, { - "uid": "github/pysal/spopt", - "url": "https://github.com/pysal/spopt", - "rel": "/software/repository/github/pysal/spopt", - "avatar": "https://avatars.githubusercontent.com/u/3769919?v=4", - "description": "Spatial Optimization", + "uid": "github/computproteomics/OmicsQ", + "url": "https://github.com/computproteomics/OmicsQ", + "rel": "/software/repository/github/computproteomics/OmicsQ", + "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", + "description": "OmicsQ: a toolkit for quantitative Omics analysis", + "topics": [] + }, + { + "uid": "github/computproteomics/PolySTest", + "url": "https://github.com/computproteomics/PolySTest", + "rel": "/software/repository/github/computproteomics/PolySTest", + "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", + "description": "PolySTest: Statistical testing with missing values", + "topics": [] + }, + { + "uid": "github/annajenul/UBayFS", + "url": "https://github.com/annajenul/UBayFS", + "rel": "/software/repository/github/annajenul/UBayFS", + "avatar": "https://avatars.githubusercontent.com/u/60505157?v=4", + "description": "UBayFS implements the UBayFS feature selection framework, together with an interactive Shiny dashbord.", "topics": [ - "spatial-optimization", - "regionalization", - "facility-location", - "routing", - "transportation", - "spatial-analysis", - "location-allocation", - "location-modeling", - "resource-planning", - "python" + "feature-selection", + "r", + "ensemble-models", + "user-knowledge", + "bayesian-statistics" ] }, { - "uid": "github/pysal/pysal", - "url": "https://github.com/pysal/pysal", - "rel": "/software/repository/github/pysal/pysal", - "avatar": "https://avatars1.githubusercontent.com/u/3769919?v=4", - "description": "PySAL: Python Spatial Analysis Library Meta-Package", + "uid": "github/yi-jia-li/cue", + "url": "https://github.com/yi-jia-li/cue", + "rel": "/software/repository/github/yi-jia-li/cue", + "avatar": "https://avatars.githubusercontent.com/u/78584993?v=4", + "description": "nebular emission modeling", "topics": [] }, { - "uid": "github/pysal/spaghetti", - "url": "https://github.com/pysal/spaghetti", - "rel": "/software/repository/github/pysal/spaghetti", - "avatar": "https://avatars.githubusercontent.com/u/3769919?v=4", - "description": "SPAtial GrapHs: nETworks, Topology, & Inference", + "uid": "github/JHayoz/CROCODILE", + "url": "https://github.com/JHayoz/CROCODILE", + "rel": "/software/repository/github/JHayoz/CROCODILE", + "avatar": "https://avatars.githubusercontent.com/u/77056052?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/deniswerth/cosmoflow", + "url": "https://github.com/deniswerth/CosmoFlow", + "rel": "/software/repository/github/deniswerth/cosmoflow", + "avatar": "https://avatars.githubusercontent.com/u/62261961?v=4", + "description": "The Cosmological Flow -- a systematic approach to primordial correlators", "topics": [ - "spatial-network", - "network-analysis", - "python", - "graph-theory", - "topology", - "pysal", - "gis" + "correlators", + "cosmology", + "inflation", + "cosmologicalflow", + "non-gaussianities" ] }, { - "uid": "github/kerkelae/disimpy", - "url": "https://github.com/kerkelae/disimpy", - "rel": "/software/repository/github/kerkelae/disimpy", - "avatar": "https://avatars3.githubusercontent.com/u/15076450?v=4", - "description": "Massively parallelized Monte Carlo diffusion MRI simulator written in Python.", + "uid": "github/bshoshany/OGRe", + "url": "https://github.com/bshoshany/OGRe", + "rel": "/software/repository/github/bshoshany/OGRe", + "avatar": "https://avatars.githubusercontent.com/u/61846320?v=4", + "description": "An object-oriented general relativity package for Mathematica.", "topics": [ - "diffusion-mri", - "diffusion-mri-simulation", - "monte-carlo-simulation", - "gpu-computing", - "cuda" + "tensor", + "tensors", + "general-relativity", + "differential-geometry", + "scientific-computing" ] }, { - "uid": "github/vwesselkamp/ernie-extension", - "url": "https://github.com/vwesselkamp/ernie-extension", - "rel": "/software/repository/github/vwesselkamp/ernie-extension", - "avatar": "https://avatars.githubusercontent.com/u/48735289?v=4", - "description": "Contains the source code of the extension ERNIE from the WPES 2021 paper \"In-Depth Technical and Legal Analysis of Tracking on Health Related Websites with ERNIE Extension\"", + "uid": "github/jianhuig/fairmetrics", + "url": "https://github.com/jianhuig/fairmetrics", + "rel": "/software/repository/github/jianhuig/fairmetrics", + "avatar": "https://avatars.githubusercontent.com/u/58570421?v=4", + "description": null, "topics": [] }, { - "uid": "github/Exo-TiC/ExoTiC-LD", - "url": "https://github.com/Exo-TiC/ExoTiC-LD", - "rel": "/software/repository/github/Exo-TiC/ExoTiC-LD", - "avatar": "https://avatars.githubusercontent.com/u/98596129?v=4", - "description": "Limb-darkening package to calculate the coefficients for specific instruments, stars, and wavelength ranges", + "uid": "github/Kennicutt/SAUSERO", + "url": "https://github.com/Kennicutt/SAUSERO", + "rel": "/software/repository/github/Kennicutt/SAUSERO", + "avatar": "https://avatars.githubusercontent.com/u/176087051?v=4", + "description": null, "topics": [] }, { - "uid": "github/cbio-astar-tools/GeneCloudOmics", - "url": "https://github.com/cbio-astar-tools/GeneCloudOmics", - "rel": "/software/repository/github/cbio-astar-tools/GeneCloudOmics", - "avatar": "https://avatars.githubusercontent.com/u/73512938?v=4", - "description": "A Biostatistical tool for Transcriptomics Analysis", + "uid": "github/xfcui/onn4arg", + "url": "https://github.com/xfcui/onn4arg", + "rel": "/software/repository/github/xfcui/onn4arg", + "avatar": "https://avatars.githubusercontent.com/u/25788176?v=4", + "description": null, "topics": [] }, { - "uid": "github/deepsphere/deepsphere-cosmo-tf1", - "url": "https://github.com/deepsphere/deepsphere-cosmo-tf1", - "rel": "/software/repository/github/deepsphere/deepsphere-cosmo-tf1", - "avatar": "https://avatars.githubusercontent.com/u/39727223?v=4", - "description": "A spherical convolutional neural network for cosmology (TFv1).", - "topics": [ - "graph-neural-networks", - "deep-learning", - "cosmology", - "spherical-harmonics", - "sphere", - "tensorflow", - "deepsphere" - ] - }, - { - "uid": "github/ifilot/edp", - "url": "https://github.com/ifilot/edp", - "rel": "/software/repository/github/ifilot/edp", - "avatar": "https://avatars.githubusercontent.com/u/1659768?v=4", - "description": "Electron Density Plotter", + "uid": "github/RWTH-EBC/FiLiP", + "url": "https://github.com/RWTH-EBC/FiLiP", + "rel": "/software/repository/github/RWTH-EBC/FiLiP", + "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", + "description": "FIWARE Library for Python (FiLiP) to work with FIWARE API", "topics": [ - "electron-density", - "vasp", - "color-scheme", - "density", - "visualization" + "fiware", + "hacktoberfest", + "fiware-orion", + "fiware-iot-agents", + "fiware-ngsi-v2", + "python", + "iot", + "fiware-quantum-leap" ] }, { - "uid": "github/DeepRank/iScore", - "url": "https://github.com/DeepRank/iScore", - "rel": "/software/repository/github/DeepRank/iScore", - "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", - "description": "iScore: an MPI supported software for ranking protein-protein docking models based on a random walk graph kernel and support vector machines", + "uid": "github/RWTH-EBC/AixCaliBuHA", + "url": "https://github.com/RWTH-EBC/AixCaliBuHA", + "rel": "/software/repository/github/RWTH-EBC/AixCaliBuHA", + "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", + "description": "Wield this tool to be King Arthur of your models.", "topics": [] }, { - "uid": "github/DeepRank/deeprank", - "url": "https://github.com/DeepRank/deeprank", - "rel": "/software/repository/github/DeepRank/deeprank", - "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", - "description": "Deep learning framework for data mining protein-protein interactions using CNN", + "uid": "github/RWTH-EBC/AixWeather", + "url": "https://github.com/RWTH-EBC/AixWeather", + "rel": "/software/repository/github/RWTH-EBC/AixWeather", + "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", + "description": "A weather data generation tool for building energy system simulations. Pull, Transform, Export.", "topics": [ - "3d-cnn", - "protein-protein-interaction", - "docking", - "pytorch" + "dwd", + "epw", + "tmy3", + "try", + "weather", + "weatherdata", + "weatherdatacollection", + "converter" ] }, { - "uid": "github/DeepRank/pssmgen", - "url": "https://github.com/DeepRank/PSSMGen", - "rel": "/software/repository/github/DeepRank/pssmgen", - "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", - "description": "Generates consistent PSSM and/or PDB files for protein-protein complexes", - "topics": [] + "uid": "github/RWTH-EBC/districtgenerator", + "url": "https://github.com/RWTH-EBC/districtgenerator", + "rel": "/software/repository/github/RWTH-EBC/districtgenerator", + "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", + "description": "Tool for demand profile generation in districts", + "topics": [ + "maintained", + "tool" + ] }, { - "uid": "github/DeepRank/deeprank-core", - "url": "https://github.com/DeepRank/deeprank-core", - "rel": "/software/repository/github/DeepRank/deeprank-core", - "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", - "description": null, + "uid": "github/ybillchen/particle_spray", + "url": "https://github.com/ybillchen/particle_spray", + "rel": "/software/repository/github/ybillchen/particle_spray", + "avatar": "https://avatars.githubusercontent.com/u/33487119?v=4", + "description": "Particle spray algorithm by Chen et al. (2024).", "topics": [] }, { - "uid": "github/DeepRank/DeepRank-GNN", - "url": "https://github.com/DeepRank/Deeprank-GNN", - "rel": "/software/repository/github/DeepRank/DeepRank-GNN", - "avatar": "https://avatars.githubusercontent.com/u/31408512?v=4", - "description": "Graph Network for protein-protein interface", - "topics": [ - "graph", - "protein" + "uid": "github/elizabethnewman/hessQuik", + "url": "https://github.com/elizabethnewman/hessQuik", + "rel": "/software/repository/github/elizabethnewman/hessQuik", + "avatar": "https://avatars.githubusercontent.com/u/39045034?v=4", + "description": "Computing gradients and Hessians of feed-forward networks with GPU acceleration", + "topics": [ + "neural-network", + "derivatives", + "gpu-acceleration" ] }, { - "uid": "github/DeepRank/pdb2sql", - "url": "https://github.com/DeepRank/pdb2sql", - "rel": "/software/repository/github/DeepRank/pdb2sql", - "avatar": "https://avatars1.githubusercontent.com/u/31408512?v=4", - "description": "Fast and versatile biomolecular structure PDB file parser using SQL queries", + "uid": "github/mperezcarrasco/AnomalyALeRCE", + "url": "https://github.com/mperezcarrasco/AnomalyALeRCE", + "rel": "/software/repository/github/mperezcarrasco/AnomalyALeRCE", + "avatar": "https://avatars.githubusercontent.com/u/26337065?v=4", + "description": "Anomaly Detector for ALeRCE broker \ud83e\udd16", "topics": [] }, { - "uid": "github/kennethcarrell/ATARRI", - "url": "https://github.com/kennethcarrell/ATARRI", - "rel": "/software/repository/github/kennethcarrell/ATARRI", - "avatar": "https://avatars.githubusercontent.com/u/63117072?v=4", - "description": "A TESS Archive RR Lyrae Classifier", + "uid": "github/hsci-r/finnish-media-scrapers", + "url": "https://github.com/hsci-r/finnish-media-scrapers", + "rel": "/software/repository/github/hsci-r/finnish-media-scrapers", + "avatar": "https://avatars.githubusercontent.com/u/58025542?v=4", + "description": "Scrapers for extracting articles from major Finnish journalistic media outlets", "topics": [] }, { - "uid": "github/DarkQuestCosmology/dark_emulator_public", - "url": "https://github.com/DarkQuestCosmology/dark_emulator_public", - "rel": "/software/repository/github/DarkQuestCosmology/dark_emulator_public", - "avatar": "https://avatars.githubusercontent.com/u/63082669?v=4", - "description": "A cosmological tool for emulation of various basic statistics of dark matter haloes based on Dark Quest project (https://darkquestcosmology.github.io/).", + "uid": "github/Climdyn/qgs", + "url": "https://github.com/Climdyn/qgs", + "rel": "/software/repository/github/Climdyn/qgs", + "avatar": "https://avatars0.githubusercontent.com/u/17494336?v=4", + "description": "A 2-layer quasi-geostrophic atmospheric model in Python. Can be coupled to a simple land or shallow-water ocean component.", "topics": [ - "emulators", - "cosmology" + "atmospheric-models", + "python", + "anaconda", + "meteorology", + "climate-variability", + "numba", + "ocean-atmosphere-model" ] }, { - "uid": "github/henrikdvn/CRSocket", - "url": "https://github.com/henrikdvn/CRSocket", - "rel": "/software/repository/github/henrikdvn/CRSocket", - "avatar": "https://avatars.githubusercontent.com/u/115465257?v=4", - "description": "Controller-Responder Socket", + "uid": "github/Climdyn/auto-AUTO", + "url": "https://github.com/Climdyn/auto-AUTO", + "rel": "/software/repository/github/Climdyn/auto-AUTO", + "avatar": "https://avatars.githubusercontent.com/u/17494336?v=4", + "description": "An AUTO-07p automatic search algorithm codebase", "topics": [] }, { - "uid": "github/ColmTalbot/gwpopulation", - "url": "https://github.com/ColmTalbot/gwpopulation", - "rel": "/software/repository/github/ColmTalbot/gwpopulation", - "avatar": "https://avatars.githubusercontent.com/u/25602909?v=4", - "description": "CPU/GPU agnostic gravitational-wave population inference", + "uid": "github/Ajstros/pyripherals", + "url": "https://github.com/Ajstros/pyripherals", + "rel": "/software/repository/github/Ajstros/pyripherals", + "avatar": "https://avatars.githubusercontent.com/u/69999361?v=4", + "description": "Python solution for communicating with peripheral ICs", "topics": [] }, { - "uid": "github/rabrahm/ceres", - "url": "https://github.com/rabrahm/ceres", - "rel": "/software/repository/github/rabrahm/ceres", - "avatar": "https://avatars.githubusercontent.com/u/16330156?v=4", - "description": "A set of pipelines and routines for echelle spectrographs", + "uid": "github/faircloth-lab/phyluce", + "url": "https://github.com/faircloth-lab/phyluce", + "rel": "/software/repository/github/faircloth-lab/phyluce", + "avatar": "https://avatars.githubusercontent.com/u/1105384?v=4", + "description": "software for UCE (and general) phylogenomics", "topics": [] }, { - "uid": "github/rabrahm/zaspe", - "url": "https://github.com/rabrahm/zaspe", - "rel": "/software/repository/github/rabrahm/zaspe", - "avatar": "https://avatars.githubusercontent.com/u/16330156?v=4", - "description": "A Code to Measure Stellar Atmospheric Parameters and their Covariance from Spectra", - "topics": [] + "uid": "github/Freakwill/pyrimidine", + "url": "https://github.com/Freakwill/pyrimidine", + "rel": "/software/repository/github/Freakwill/pyrimidine", + "avatar": "https://avatars.githubusercontent.com/u/30965609?v=4", + "description": "\ud83e\uddecOO implement of genetic algorithm by python", + "topics": [ + "genetic-algorithm", + "python", + "pyrimidine", + "iteration" + ] }, { - "uid": "github/dkirkby/gphist", - "url": "https://github.com/dkirkby/gphist", - "rel": "/software/repository/github/dkirkby/gphist", - "avatar": "https://avatars.githubusercontent.com/u/185007?v=4", - "description": "Cosmological expansion history inference using Gaussian processes", + "uid": "github/pyiron/executorlib", + "url": "https://github.com/pyiron/executorlib", + "rel": "/software/repository/github/pyiron/executorlib", + "avatar": "https://avatars.githubusercontent.com/u/25691954?v=4", + "description": "Up-scale python functions for high performance computing (HPC)", "topics": [ - "cosmology", - "machine-learning", - "gaussian-processes" + "hpc", + "mpi", + "mpi4py", + "multiprocessing", + "pyiron" ] }, { - "uid": "github/Dailer/RCausticMass", - "url": "https://github.com/Dailer/RCausticMass", - "rel": "/software/repository/github/Dailer/RCausticMass", - "avatar": "https://avatars.githubusercontent.com/u/33109275?v=4", - "description": "Caustic Mass Estimator for Galaxy Clusters", + "uid": "github/Open-ET/flux-data-qaqc", + "url": "https://github.com/Open-ET/flux-data-qaqc", + "rel": "/software/repository/github/Open-ET/flux-data-qaqc", + "avatar": "https://avatars.githubusercontent.com/u/18035656?v=4", + "description": "Energy Balance Closure Analysis and Eddy Flux Data Post-Processing", "topics": [] }, { - "uid": "github/pyro-kinetics/pyrokinetics", - "url": "https://github.com/pyro-kinetics/pyrokinetics", - "rel": "/software/repository/github/pyro-kinetics/pyrokinetics", - "avatar": "https://avatars.githubusercontent.com/u/84965465?v=4", - "description": "Python library to run and analyse gyrokinetics simulations", + "uid": "github/wokast/RePrimAnd", + "url": "https://github.com/wokast/RePrimAnd", + "rel": "/software/repository/github/wokast/RePrimAnd", + "avatar": "https://avatars.githubusercontent.com/u/28341738?v=4", + "description": "Support library providing EOS and primitive recovery framework for general relativistic ideal MHD", "topics": [] }, { - "uid": "github/nimble-dev/nimbleHMC", - "url": "https://github.com/nimble-dev/nimbleHMC", - "rel": "/software/repository/github/nimble-dev/nimbleHMC", - "avatar": "https://avatars.githubusercontent.com/u/7871767?v=4", - "description": "HMC and other derivative-based MCMC sampling algorithms for the nimble package", + "uid": "github/wokast/PyCactus", + "url": "https://github.com/wokast/PyCactus", + "rel": "/software/repository/github/wokast/PyCactus", + "avatar": "https://avatars.githubusercontent.com/u/28341738?v=4", + "description": "Python packages for post-processing Cactus computational toolkit simulation data", "topics": [] }, { - "uid": "github/jobovy/streamgap-pepper", - "url": "https://github.com/jobovy/streamgap-pepper", - "rel": "/software/repository/github/jobovy/streamgap-pepper", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Code exploring the effect of peppering of streams with many small impacts", + "uid": "github/LabTranslationalArchitectomics/riboWaltz", + "url": "https://github.com/LabTranslationalArchitectomics/riboWaltz", + "rel": "/software/repository/github/LabTranslationalArchitectomics/riboWaltz", + "avatar": "https://avatars.githubusercontent.com/u/21190963?v=4", + "description": "optimization of ribosome P-site positioning in ribosome profiling data", "topics": [] }, { - "uid": "github/jobovy/stream-stream", - "url": "https://github.com/jobovy/stream-stream", - "rel": "/software/repository/github/jobovy/stream-stream", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Investigation of the interaction between stellar and dark-matter streams", + "uid": "github/FCS-analysis/multipletau", + "url": "https://github.com/FCS-analysis/multipletau", + "rel": "/software/repository/github/FCS-analysis/multipletau", + "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", + "description": "python multiple-tau correlation algorithm", "topics": [] }, { - "uid": "github/jobovy/simple-m2m", - "url": "https://github.com/jobovy/simple-m2m", - "rel": "/software/repository/github/jobovy/simple-m2m", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Simple M2M setup to explore some new ideas", + "uid": "github/KBNLresearch/ochre", + "url": "https://github.com/KBNLresearch/ochre", + "rel": "/software/repository/github/KBNLresearch/ochre", + "avatar": "https://avatars1.githubusercontent.com/u/3776439?v=4", + "description": "Toolbox for OCR post-correction", "topics": [] }, { - "uid": "github/jobovy/extreme-deconvolution", - "url": "https://github.com/jobovy/extreme-deconvolution", - "rel": "/software/repository/github/jobovy/extreme-deconvolution", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Density estimation using Gaussian mixtures in the presence of noisy, heterogeneous and incomplete data", + "uid": "github/NeotomaDB/neotoma2", + "url": "https://github.com/NeotomaDB/neotoma2", + "rel": "/software/repository/github/NeotomaDB/neotoma2", + "avatar": "https://avatars.githubusercontent.com/u/19538006?v=4", + "description": "Repository for the updated neotoma R package.", "topics": [ - "density-estimation", - "machine-learning", - "gaussian-mixture-models", - "python", - "c", - "uncertainty" + "neotoma", + "paleoecology", + "rstats", + "r", + "earthcube", + "nsf" ] }, { - "uid": "github/jobovy/galpy", - "url": "https://github.com/jobovy/galpy", - "rel": "/software/repository/github/jobovy/galpy", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Galactic Dynamics in python", + "uid": "github/kibokov/grumpy", + "url": "https://github.com/kibokov/GRUMPY", + "rel": "/software/repository/github/kibokov/grumpy", + "avatar": "https://avatars.githubusercontent.com/u/44586619?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/yongsukyee/uncertain_blackholemass", + "url": "https://github.com/yongsukyee/uncertain_blackholemass", + "rel": "/software/repository/github/yongsukyee/uncertain_blackholemass", + "avatar": "https://avatars.githubusercontent.com/u/11021594?v=4", + "description": "Uncertainty quantification of black hole mass estimation", "topics": [ - "astrophysics", - "astronomy", - "python", - "dynamics", - "scientific-computing", - "physics", - "astropy-affiliated" + "agn", + "black-hole", + "conformal-prediction", + "neural-networks", + "prediction", + "prediction-intervals", + "pytorch", + "quasar", + "uncertainty-quantification" ] }, { - "uid": "github/jobovy/apogee", - "url": "https://github.com/jobovy/apogee", - "rel": "/software/repository/github/jobovy/apogee", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Tools for dealing with APOGEE data", + "uid": "github/matthewholman/assist", + "url": "https://github.com/matthewholman/assist", + "rel": "/software/repository/github/matthewholman/assist", + "avatar": "https://avatars.githubusercontent.com/u/3812057?v=4", + "description": "ASSIST is a software package for ephemeris-quality integrations of test particles.", "topics": [ "astrophysics", - "python", - "spectroscopy", - "data", - "data-analysis", - "astronomy" + "integrator", + "n-body", + "planetary-science" ] }, { - "uid": "github/jobovy/segueSelect", - "url": "https://github.com/jobovy/segueSelect", - "rel": "/software/repository/github/jobovy/segueSelect", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Selection function for the SDSS/SEGUE survey (G and K star samples)", + "uid": "github/aineniamh/snipit", + "url": "https://github.com/aineniamh/snipit", + "rel": "/software/repository/github/aineniamh/snipit", + "avatar": "https://avatars.githubusercontent.com/u/11678307?v=4", + "description": "snipit: summarise snps relative to your reference sequence", "topics": [] }, { - "uid": "github/jobovy/gaia_tools", - "url": "https://github.com/jobovy/gaia_tools", - "rel": "/software/repository/github/jobovy/gaia_tools", - "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", - "description": "Tools for working with the @ESAGaia data and related data sets", - "topics": [ - "astrophysics", - "astronomy", - "gaia", - "python" - ] - }, - { - "uid": "github/gogetdata/ggd-utils", - "url": "https://github.com/gogetdata/ggd-utils", - "rel": "/software/repository/github/gogetdata/ggd-utils", - "avatar": "https://avatars.githubusercontent.com/u/18429455?v=4", - "description": "programs for use in ggd", + "uid": "github/aineniamh/squirrel", + "url": "https://github.com/aineniamh/squirrel", + "rel": "/software/repository/github/aineniamh/squirrel", + "avatar": "https://avatars.githubusercontent.com/u/11678307?v=4", + "description": null, "topics": [] }, { - "uid": "github/sanctuuary/ape", - "url": "https://github.com/sanctuuary/APE", - "rel": "/software/repository/github/sanctuuary/ape", - "avatar": "https://avatars.githubusercontent.com/u/58854891?v=4", - "description": "APE (Automated Pipeline Explorer)", + "uid": "github/GreenScheduler/cats", + "url": "https://github.com/GreenScheduler/cats", + "rel": "/software/repository/github/GreenScheduler/cats", + "avatar": "https://avatars.githubusercontent.com/u/132558689?v=4", + "description": "CATS: the Climate-Aware Task Scheduler \ud83d\udc08 \ud83d\udc08\u200d\u2b1b", "topics": [ - "automated-pipeline", - "workflow-synthesis", - "program-synthesis", - "java" + "climate", + "computing", + "scheduling", + "carbon", + "carbon-footprint", + "electricity", + "electricity-consumption", + "energy", + "energy-consumption", + "job-scheduler" ] }, { - "uid": "github/iosefa/PyForestScan", - "url": "https://github.com/iosefa/PyForestScan", - "rel": "/software/repository/github/iosefa/PyForestScan", - "avatar": "https://avatars.githubusercontent.com/u/24607032?v=4", - "description": "A python package for calculating forest structural metrics from airborne point clouds.", + "uid": "github/PIK-LPJmL/lpjmlkit", + "url": "https://github.com/PIK-LPJmL/lpjmlkit", + "rel": "/software/repository/github/PIK-LPJmL/lpjmlkit", + "avatar": "https://avatars.githubusercontent.com/u/39558205?v=4", + "description": "A collection of basic functions to facilitate the work with the DGVM LPJmL hosted at the Potsdam Institute for Climate Impact Research. It provides functions for running LPJmL, as well as reading, processing and writing model-related data such as inputs and outputs or configuration files.", "topics": [ - "ecology", - "lidar", - "point-cloud", - "forest-structure" + "cran", + "r", + "r-package" ] }, { - "uid": "github/bjmorgan/py-sc-fermi", - "url": "https://github.com/bjmorgan/py-sc-fermi", - "rel": "/software/repository/github/bjmorgan/py-sc-fermi", - "avatar": "https://avatars.githubusercontent.com/u/1182923?v=4", - "description": "py-sc-fermi is a materials modelling code for calculating self-consistent Fermi energies and defect concentrations under thermodynamic equilibrium (or quasi-equilibrium) given defect formation energies.", + "uid": "github/cosmodesi/pycorr", + "url": "https://github.com/cosmodesi/pycorr", + "rel": "/software/repository/github/cosmodesi/pycorr", + "avatar": "https://avatars.githubusercontent.com/u/8990486?v=4", + "description": "2-pt correlation function estimation", "topics": [] }, { - "uid": "github/maormizrachi/MadVoro", - "url": "https://github.com/maormizrachi/MadVoro", - "rel": "/software/repository/github/maormizrachi/MadVoro", - "avatar": "https://avatars.githubusercontent.com/u/85169126?v=4", - "description": null, - "topics": [] + "uid": "github/tbrown122387/pf", + "url": "https://github.com/tbrown122387/pf", + "rel": "/software/repository/github/tbrown122387/pf", + "avatar": "https://avatars0.githubusercontent.com/u/1740324?v=4", + "description": "PF: a header only template library for fast particle filtering!", + "topics": [ + "particle-filter", + "statistics", + "statistical-methods", + "statistical-models" + ] }, { - "uid": "github/galactic-ai/haloflow", - "url": "https://github.com/galactic-ai/haloflow", - "rel": "/software/repository/github/galactic-ai/haloflow", - "avatar": "https://avatars.githubusercontent.com/u/180338519?v=4", - "description": "Simulation-Based Inference (SBI) using forward modeled galaxy photometry", + "uid": "github/karlotness/adrt", + "url": "https://github.com/karlotness/adrt", + "rel": "/software/repository/github/karlotness/adrt", + "avatar": "https://avatars.githubusercontent.com/u/8847665?v=4", + "description": "Fast approximate discrete Radon transform for NumPy arrays", "topics": [] }, { - "uid": "github/SciOmicsLab/PhenoComb", - "url": "https://github.com/SciOmicsLab/PhenoComb", - "rel": "/software/repository/github/SciOmicsLab/PhenoComb", - "avatar": "https://avatars.githubusercontent.com/u/69360691?v=4", - "description": "An R package for combinatorial analysis of phenotypes", + "uid": "github/DavidT3/XGA", + "url": "https://github.com/DavidT3/XGA", + "rel": "/software/repository/github/DavidT3/XGA", + "avatar": "https://avatars.githubusercontent.com/u/17744555?v=4", + "description": "X-ray: Generate and Analyse is a module designed to make the analysis of XMM observations simple and efficient. It provides an interface with SAS for the creation of XMM data products, as well as a way to easily perform fits (scalable for multiple observations) and retrieve information about an object, all within a Python package. ", + "topics": [ + "xga", + "xmm", + "xmm-science-analysis", + "xspec", + "xmm-observations", + "sas", + "heasoft", + "x-ray", + "astrophysics", + "astronomy", + "galaxy-clusters", + "x-ray-astronomy" + ] + }, + { + "uid": "github/DavidT3/DAXA", + "url": "https://github.com/DavidT3/DAXA", + "rel": "/software/repository/github/DavidT3/DAXA", + "avatar": "https://avatars.githubusercontent.com/u/17744555?v=4", + "description": "Democratising Archival X-ray Astronomy (DAXA) is an easy-to-use Python module for downloading multi-mission X-ray telescope data and processing it into usable archives. Users can acquire entire archives, or filter observations based on ID/positions/time. Supports XMM; partial support eROSITA, Chandra, NuSTAR, Swift, Suzaku, ASCA, ROSAT, INTEGRAL", + "topics": [ + "astronomy", + "astrophysics", + "python", + "x-ray-astronomy", + "xmm", + "chandra", + "erosita", + "xga", + "archival-astronomy", + "nustar", + "rosat", + "asca", + "integral", + "suzaku", + "swift" + ] + }, + { + "uid": "github/florian-lienhard/MM-LSD", + "url": "https://github.com/florian-lienhard/MM-LSD", + "rel": "/software/repository/github/florian-lienhard/MM-LSD", + "avatar": "https://avatars.githubusercontent.com/u/72667280?v=4", + "description": null, "topics": [] }, { - "uid": "github/cjtu/craterpy", - "url": "https://github.com/cjtu/craterpy", - "rel": "/software/repository/github/cjtu/craterpy", - "avatar": "https://avatars.githubusercontent.com/u/10285279?v=4", - "description": "A python library for impact crater data science", + "uid": "github/lamyj/odil", + "url": "https://github.com/lamyj/odil", + "rel": "/software/repository/github/lamyj/odil", + "avatar": "https://avatars.githubusercontent.com/u/4102070?v=4", + "description": "Odil is a C++11 library for the DICOM standard", "topics": [ - "planetary", - "data-science", + "c-plus-plus", + "dicom", "python", - "open-science" + "medical-imaging" ] }, { - "uid": "github/egjergo/galcem", - "url": "https://github.com/egjergo/GalCEM", - "rel": "/software/repository/github/egjergo/galcem", - "avatar": "https://avatars.githubusercontent.com/u/7225502?v=4", - "description": "Please email us to get a JupyterHub account, or for any other queries", + "uid": "github/keflavich/HiGal_SEDfitter", + "url": "https://github.com/keflavich/HiGal_SEDfitter", + "rel": "/software/repository/github/keflavich/HiGal_SEDfitter", + "avatar": "https://avatars.githubusercontent.com/u/143715?v=4", + "description": "SED fitting tools for Herschel Hi-Gal data", "topics": [] }, { - "uid": "github/hallamlab/TreeSAPP", - "url": "https://github.com/hallamlab/TreeSAPP", - "rel": "/software/repository/github/hallamlab/TreeSAPP", - "avatar": "https://avatars.githubusercontent.com/u/2644334?v=4", - "description": "A Python package for gene-centric taxonomic and functional classification using phylogenetic placement", + "uid": "github/dellytools/delly", + "url": "https://github.com/dellytools/delly", + "rel": "/software/repository/github/dellytools/delly", + "avatar": "https://avatars3.githubusercontent.com/u/23377671?v=4", + "description": "DELLY2: Structural variant discovery by integrated paired-end and split-read analysis", "topics": [ - "bioinformatics", - "phylogenetics", - "microbial-genomics" + "structural-variation", + "sv-discovery", + "delly-users", + "delly", + "rearrangement", + "genomic", + "cancer-genomics", + "germline", + "tumor", + "svs" ] }, { - "uid": "github/single-cell-genetics/vireo", - "url": "https://github.com/single-cell-genetics/vireo", - "rel": "/software/repository/github/single-cell-genetics/vireo", - "avatar": "https://avatars.githubusercontent.com/u/57483384?v=4", - "description": "Demultiplexing pooled scRNA-seq data with or without genotype reference", + "uid": "github/dellytools/sansa", + "url": "https://github.com/dellytools/sansa", + "rel": "/software/repository/github/dellytools/sansa", + "avatar": "https://avatars.githubusercontent.com/u/23377671?v=4", + "description": "Structural variant annotation", "topics": [ - "single-cells", - "scrna-seq", - "demultiplex", - "donor-deconvolution", - "variational-inference" + "structural-variation", + "sv-annotation", + "gene-annotation", + "delly" ] }, { - "uid": "github/single-cell-genetics/cellsnp-lite", - "url": "https://github.com/single-cell-genetics/cellsnp-lite", - "rel": "/software/repository/github/single-cell-genetics/cellsnp-lite", - "avatar": "https://avatars.githubusercontent.com/u/57483384?v=4", - "description": "Efficient genotyping bi-allelic SNPs on single cells", + "uid": "github/d-tear/SIAL", + "url": "https://github.com/d-tear/SIAL", + "rel": "/software/repository/github/d-tear/SIAL", + "avatar": "https://avatars0.githubusercontent.com/u/19397687?v=4", + "description": "Simple Image Analysis Library", + "topics": [] + }, + { + "uid": "github/arkavo/CUDA-METRO", + "url": "https://github.com/arkavo/CUDA-METRO", + "rel": "/software/repository/github/arkavo/CUDA-METRO", + "avatar": "https://avatars.githubusercontent.com/u/16555024?v=4", + "description": "Based on the pyCUDA enabled Metropolis MCMC for spintronics simulations.", + "topics": [] + }, + { + "uid": "github/MillionConcepts/lhorizon", + "url": "https://github.com/MillionConcepts/lhorizon", + "rel": "/software/repository/github/MillionConcepts/lhorizon", + "avatar": "https://avatars.githubusercontent.com/u/56450892?v=4", + "description": "lhorizon helps you find things in the Solar System.", "topics": [ - "single-cell", - "genetic-variants", - "genotyping" + "python", + "planetary-science", + "ephemerides" ] }, { - "uid": "github/GreiffLab/immuneREF", - "url": "https://github.com/GreiffLab/immuneREF", - "rel": "/software/repository/github/GreiffLab/immuneREF", - "avatar": "https://avatars.githubusercontent.com/u/38805362?v=4", + "uid": "github/dengzhuo-AI/Real-Fundus", + "url": "https://github.com/dengzhuo-AI/Real-Fundus", + "rel": "/software/repository/github/dengzhuo-AI/Real-Fundus", + "avatar": "https://avatars.githubusercontent.com/u/63216977?v=4", "description": null, "topics": [] }, { - "uid": "github/codemeleon/seqPanther", - "url": "https://github.com/codemeleon/seqPanther", - "rel": "/software/repository/github/codemeleon/seqPanther", - "avatar": "https://avatars.githubusercontent.com/u/7693569?v=4", - "description": "Variant Caller and Patcher", + "uid": "github/szwiep/py_SBeLT", + "url": "https://github.com/szwiep/py_SBeLT", + "rel": "/software/repository/github/szwiep/py_SBeLT", + "avatar": "https://avatars.githubusercontent.com/u/57023024?v=4", + "description": "A Markov-type numerical model of sediment particle transport in rivers", "topics": [] }, { - "uid": "github/astropy/SPISEA", - "url": "https://github.com/astropy/SPISEA", - "rel": "/software/repository/github/astropy/SPISEA", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Stellar Population Synthesis Modeling", + "uid": "github/jonathansick/MoAstro", + "url": "https://github.com/jonathansick/MoAstro", + "rel": "/software/repository/github/jonathansick/MoAstro", + "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", + "description": "MongoDB framework for observational astronomy", "topics": [] }, { - "uid": "github/astropy/halotools", - "url": "https://github.com/astropy/halotools", - "rel": "/software/repository/github/astropy/halotools", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models", + "uid": "github/jonathansick/starfish", + "url": "https://github.com/jonathansick/starfish", + "rel": "/software/repository/github/jonathansick/starfish", + "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", + "description": "GitHub StarFISH mirror (with patches)", "topics": [] }, { - "uid": "github/astropy/astroplan", - "url": "https://github.com/astropy/astroplan", - "rel": "/software/repository/github/astropy/astroplan", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Observation planning package for astronomers", + "uid": "github/jonathansick/skyoffset", + "url": "https://github.com/jonathansick/skyoffset", + "rel": "/software/repository/github/jonathansick/skyoffset", + "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", + "description": "Sky offset optimization and mosaicing toolkit used by ANDROIDS", "topics": [] }, { - "uid": "github/astropy/astropy", - "url": "https://github.com/astropy/astropy", - "rel": "/software/repository/github/astropy/astropy", - "avatar": "https://avatars0.githubusercontent.com/u/847984?v=4", - "description": "Repository for the Astropy core package", + "uid": "github/YuLab-SMU/treeio", + "url": "https://github.com/YuLab-SMU/treeio", + "rel": "/software/repository/github/YuLab-SMU/treeio", + "avatar": "https://avatars.githubusercontent.com/u/40430016?v=4", + "description": ":seedling: Base Classes and Functions for Phylogenetic Tree Input and Output", "topics": [ - "python", - "astronomy", - "science" + "phylogenetic-trees", + "parser", + "exporter", + "exporter", + "parser", + "phylogenetic-trees", + "data-extraction" ] }, { - "uid": "github/astropy/astroscrappy", - "url": "https://github.com/astropy/astroscrappy", - "rel": "/software/repository/github/astropy/astroscrappy", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Speedy Cosmic Ray Annihilation Package in Python", + "uid": "github/GENtle-persons/gentle-m", + "url": "https://github.com/GENtle-persons/gentle-m", + "rel": "/software/repository/github/GENtle-persons/gentle-m", + "avatar": "https://avatars.githubusercontent.com/u/141044235?v=4", + "description": null, "topics": [] }, { - "uid": "github/astropy/specutils", - "url": "https://github.com/astropy/specutils", - "rel": "/software/repository/github/astropy/specutils", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "An Astropy coordinated package for astronomical spectroscopy. Maintainers: @nmearl @rosteen @keflavich @eteq", - "topics": [ - "astropy" - ] + "uid": "github/sheneman/clearcut", + "url": "https://github.com/sheneman/clearcut", + "rel": "/software/repository/github/sheneman/clearcut", + "avatar": "https://avatars.githubusercontent.com/u/3028345?v=4", + "description": "This is clearcut, the reference implementation for the Relaxed Neighbor Joining algorithm.", + "topics": [] }, { - "uid": "github/astropy/ccdproc", - "url": "https://github.com/astropy/ccdproc", - "rel": "/software/repository/github/astropy/ccdproc", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Astropy affiliated package for reducing optical/IR CCD data", - "topics": [ - "python", - "astropy-affiliated", - "ccd", - "astronomy" - ] + "uid": "github/piernik-dev/piernik", + "url": "https://github.com/piernik-dev/piernik", + "rel": "/software/repository/github/piernik-dev/piernik", + "avatar": "https://avatars.githubusercontent.com/u/4697368?v=4", + "description": "Piernik MHD Code", + "topics": [] }, { - "uid": "github/astropy/astroquery", - "url": "https://github.com/astropy/astroquery", - "rel": "/software/repository/github/astropy/astroquery", - "avatar": "https://avatars.githubusercontent.com/u/847984?v=4", - "description": "Functions and classes to access online data resources. Maintainers: @keflavich and @bsipocz and @ceb8", + "uid": "github/BRAIN-TO/GIRFReco.jl", + "url": "https://github.com/BRAIN-TO/GIRFReco.jl", + "rel": "/software/repository/github/BRAIN-TO/GIRFReco.jl", + "avatar": "https://avatars.githubusercontent.com/u/62714197?v=4", + "description": "An Open-Source End-to-End Pipeline for Spiral Magnetic Resonance Image (MRI) Reconstruction in Julia", "topics": [ - "astropy", - "python", - "astropy-affiliated", - "astronomy", - "hacktoberfest", - "closember" + "mri", + "mri-brain", + "mri-reconstruction" ] }, { - "uid": "github/jaimerzp/limberjack.jl", - "url": "https://github.com/JaimeRZP/LimberJack.jl", - "rel": "/software/repository/github/jaimerzp/limberjack.jl", - "avatar": "https://avatars.githubusercontent.com/u/39957598?v=4", - "description": "Auto-differentiable methods for Cosmology", - "topics": [ - "auto-differentiation", - "cosmology" - ] + "uid": "github/cjneely10/EukMetaSanity", + "url": "https://github.com/cjneely10/EukMetaSanity", + "rel": "/software/repository/github/cjneely10/EukMetaSanity", + "avatar": "https://avatars.githubusercontent.com/u/31027651?v=4", + "description": "Structural and functional annotation of eukaryotic metagenome-assembled genomes", + "topics": [] }, { - "uid": "github/mlarichardson/ramses2hsim", - "url": "https://github.com/mlarichardson/ramses2hsim", - "rel": "/software/repository/github/mlarichardson/ramses2hsim", - "avatar": "https://avatars.githubusercontent.com/u/10811587?v=4", - "description": "A simulation pipeline for converting cosmological RAMSES simulations into input FITS cubes for the hsim pipeline.", + "uid": "github/octapps/octapps", + "url": "https://github.com/octapps/octapps", + "rel": "/software/repository/github/octapps/octapps", + "avatar": "https://avatars.githubusercontent.com/u/38090409?v=4", + "description": "Library of Octave functions for continuous gravitational-wave data analysis", "topics": [] }, { - "uid": "github/mlarichardson/CosmosCanvas", - "url": "https://github.com/mlarichardson/CosmosCanvas", - "rel": "/software/repository/github/mlarichardson/CosmosCanvas", - "avatar": "https://avatars.githubusercontent.com/u/10811587?v=4", - "description": "A library that incorporates Gilles Ferrand's colourspace, creating useful colour maps for different astrophysical properties.", + "uid": "github/uwssg/APS", + "url": "https://github.com/uwssg/APS", + "rel": "/software/repository/github/uwssg/APS", + "avatar": "https://avatars.githubusercontent.com/u/1728180?v=4", + "description": "an alternative to Markov chain Monte Carlo", "topics": [] }, { - "uid": "github/a-slide/pycoQC", - "url": "https://github.com/a-slide/pycoQC", - "rel": "/software/repository/github/a-slide/pycoQC", - "avatar": "https://avatars.githubusercontent.com/u/5701192?v=4", - "description": "pycoQC computes metrics and generates Interactive QC plots from the sequencing summary report generated by Oxford Nanopore technologies basecaller (Albacore/Guppy)", + "uid": "github/stammler/dustpy", + "url": "https://github.com/stammler/dustpy", + "rel": "/software/repository/github/stammler/dustpy", + "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", + "description": "Python package for the simulation of dust evolution in protoplanetary disks.", + "topics": [] + }, + { + "uid": "github/stammler/dustpylib", + "url": "https://github.com/stammler/dustpylib", + "rel": "/software/repository/github/stammler/dustpylib", + "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", + "description": "Library with auxiliary modules for DustPy", "topics": [ - "jupyter-notebook", - "generates-plots", - "computing-metrics", - "nanopore" + "astrophysics", + "planetary-science", + "python" ] }, { - "uid": "github/mlhutchins/LWPC", - "url": "https://github.com/mlhutchins/LWPC", - "rel": "/software/repository/github/mlhutchins/LWPC", - "avatar": "https://avatars.githubusercontent.com/u/5377015?v=4", - "description": "Version 2.1 of the U.S. Navy Long Wave Propagation Capability code with alterations for running as a MATLAB function. The altered version has most warning and error reporting removed.", + "uid": "github/stammler/simframe", + "url": "https://github.com/stammler/simframe", + "rel": "/software/repository/github/stammler/simframe", + "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", + "description": "Python framework for setting up and running scientific simulations. It comes with a variety of integration schemes and some infrastructure of reading and writing data files.", + "topics": [ + "python" + ] + }, + { + "uid": "github/MyWebIntelligence/MyWebIntelligencePython", + "url": "https://github.com/MyWebIntelligence/MyWebIntelligencePython", + "rel": "/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", + "avatar": "https://avatars.githubusercontent.com/u/9200321?v=4", + "description": "Class Python App of My Web Intelligence", "topics": [] }, { - "uid": "github/SJTU-CGM/ivTerm", - "url": "https://github.com/SJTU-CGM/ivTerm", - "rel": "/software/repository/github/SJTU-CGM/ivTerm", - "avatar": "https://avatars.githubusercontent.com/u/10217715?v=4", - "description": null, + "uid": "github/Wytamma/snk", + "url": "https://github.com/Wytamma/snk", + "rel": "/software/repository/github/Wytamma/snk", + "avatar": "https://avatars.githubusercontent.com/u/13726005?v=4", + "description": "Snakemake workflow management system and CLI generation tool", "topics": [] }, { - "uid": "github/catboost/catboost", - "url": "https://github.com/catboost/catboost", - "rel": "/software/repository/github/catboost/catboost", - "avatar": "https://avatars.githubusercontent.com/u/29043415?v=4", - "description": "A fast, scalable, high performance Gradient Boosting on Decision Trees library, used for ranking, classification, regression and other machine learning tasks for Python, R, Java, C++. Supports computation on CPU and GPU.", + "uid": "github/bacpop/ska.rust", + "url": "https://github.com/bacpop/ska.rust", + "rel": "/software/repository/github/bacpop/ska.rust", + "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", + "description": "Split k-mer analysis \u2013 version 2", "topics": [ - "machine-learning", - "decision-trees", - "gradient-boosting", - "gbm", - "gbdt", - "python", - "r", - "kaggle", - "gpu-computing", - "catboost", - "tutorial", - "categorical-features", - "gpu", - "coreml", - "data-science", - "big-data", - "cuda", - "data-mining" + "bioinformatics", + "sequence", + "ska", + "rust", + "alignment", + "k-mer" ] }, { - "uid": "github/TheMillerLab/genetex", - "url": "https://github.com/TheMillerLab/genetex", - "rel": "/software/repository/github/TheMillerLab/genetex", - "avatar": "https://avatars.githubusercontent.com/u/80731901?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/adtzlr/felupe", - "url": "https://github.com/adtzlr/felupe", - "rel": "/software/repository/github/adtzlr/felupe", - "avatar": "https://avatars.githubusercontent.com/u/5793153?v=4", - "description": "finite element analysis for continuum mechanics of solid bodies", + "uid": "github/bacpop/PopPUNK", + "url": "https://github.com/bacpop/PopPUNK", + "rel": "/software/repository/github/bacpop/PopPUNK", + "avatar": "https://avatars.githubusercontent.com/u/78856671?v=4", + "description": "PopPUNK \ud83d\udc68\u200d\ud83c\udfa4 (POPulation Partitioning Using Nucleotide Kmers)", "topics": [ - "finite-element-analysis", - "python", - "hyperelasticity", - "fem", - "partial-differential-equations", - "pde", - "scientific-computing", - "solid-mechanics", - "fea", - "finite-element-methods", - "solid-mechanics-codes", - "finite-elements", - "umat", - "3d", - "jax" + "bacteria", + "genomics", + "population-genetics", + "k-mer", + "sketching" ] }, { - "uid": "github/dstansby/pfsspy", - "url": "https://github.com/dstansby/pfsspy", - "rel": "/software/repository/github/dstansby/pfsspy", - "avatar": "https://avatars0.githubusercontent.com/u/6197628?v=4", - "description": "Potential Field Source Surface model package for Python", + "uid": "github/bcalden/ClusterPyXT", + "url": "https://github.com/bcalden/ClusterPyXT", + "rel": "/software/repository/github/bcalden/ClusterPyXT", + "avatar": "https://avatars.githubusercontent.com/u/10778805?v=4", + "description": "The Galaxy Cluster \u2018Pypeline\u2019 for X-ray Temperature Maps", "topics": [ - "python", - "physics", - "solar-physics", - "sun" + "galaxy-clusters", + "pipeline", + "astronomy", + "x-ray-astronomy", + "astrophysics", + "spectral-analysis", + "cosmology" ] }, { - "uid": "github/DataIntellSystLab/KARGA", - "url": "https://github.com/DataIntellSystLab/KARGA", - "rel": "/software/repository/github/DataIntellSystLab/KARGA", - "avatar": "https://avatars.githubusercontent.com/u/59449016?v=4", - "description": "Multi-platform Toolkit for k-mer-based Antibiotic Resistance Gene Analysis of High-throughput Sequencing Data", + "uid": "github/NLESC-JCER/QMCTorch", + "url": "https://github.com/NLESC-JCER/QMCTorch", + "rel": "/software/repository/github/NLESC-JCER/QMCTorch", + "avatar": "https://avatars.githubusercontent.com/u/44467875?v=4", + "description": "Pytorch Implementation of Real Space Quantum Monte Carlo Simulations of Molecular Systems", "topics": [] }, { - "uid": "github/saopicc/DDFacet", - "url": "https://github.com/saopicc/DDFacet", - "rel": "/software/repository/github/saopicc/DDFacet", - "avatar": "https://avatars.githubusercontent.com/u/23380437?v=4", - "description": "DDFacet Imaging Project", - "topics": [] + "uid": "github/NLESC-JCER/EigenCuda", + "url": "https://github.com/NLESC-JCER/EigenCuda", + "rel": "/software/repository/github/NLESC-JCER/EigenCuda", + "avatar": "https://avatars3.githubusercontent.com/u/44467875?v=4", + "description": "Offload Eigen operations to GPUs", + "topics": [ + "eigen3", + "gpu-computing", + "cpp14", + "matrix-multiplication" + ] }, { - "uid": "github/saopicc/killMS", - "url": "https://github.com/saopicc/killMS", - "rel": "/software/repository/github/saopicc/killMS", - "avatar": "https://avatars.githubusercontent.com/u/23380437?v=4", - "description": "Package for direction dependent calibration", - "topics": [] + "uid": "github/NLESC-JCER/Fortran_Davidson", + "url": "https://github.com/NLESC-JCER/Fortran_Davidson", + "rel": "/software/repository/github/NLESC-JCER/Fortran_Davidson", + "avatar": "https://avatars3.githubusercontent.com/u/44467875?v=4", + "description": "Davidson eigensolver implemented in Fortran", + "topics": [ + "eigenvalues", + "linear-algebra", + "davidson-eigensolver", + "modern-fortran", + "research-and-development" + ] }, { - "uid": "github/quinlanW/dbMisLoc", - "url": "https://github.com/quinlanW/dbMisLoc", - "rel": "/software/repository/github/quinlanW/dbMisLoc", - "avatar": "https://avatars.githubusercontent.com/u/57059991?v=4", + "uid": "github/NLESC-JCER/QMCblip", + "url": "https://github.com/NLESC-JCER/QMCblip", + "rel": "/software/repository/github/NLESC-JCER/QMCblip", + "avatar": "https://avatars.githubusercontent.com/u/44467875?v=4", "description": null, "topics": [] }, { - "uid": "github/PfizerRD/sit2standpy", - "url": "https://github.com/PfizerRD/sit2standpy", - "rel": "/software/repository/github/PfizerRD/sit2standpy", - "avatar": "https://avatars1.githubusercontent.com/u/19213564?v=4", - "description": "Python based module framework for detecting sit-to-stand transitions", - "topics": [] - }, - { - "uid": "github/datngu/Circall", - "url": "https://github.com/datngu/Circall", - "rel": "/software/repository/github/datngu/Circall", - "avatar": "https://avatars.githubusercontent.com/u/59732388?v=4", - "description": "Circall is a novel method to discover circular RNA from paired-end RNA sequencing data", + "uid": "github/Sarc-Graph/sarcgraph", + "url": "https://github.com/Sarc-Graph/sarcgraph", + "rel": "/software/repository/github/Sarc-Graph/sarcgraph", + "avatar": "https://avatars.githubusercontent.com/u/111386973?v=4", + "description": null, "topics": [] }, { - "uid": "github/ropensci-review-tools/pkgcheck", - "url": "https://github.com/ropensci-review-tools/pkgcheck", - "rel": "/software/repository/github/ropensci-review-tools/pkgcheck", - "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", - "description": "Check whether a package is ready for submission to rOpenSci's peer-review system", + "uid": "github/chenzhaiyu/abspy", + "url": "https://github.com/chenzhaiyu/abspy", + "rel": "/software/repository/github/chenzhaiyu/abspy", + "avatar": "https://avatars.githubusercontent.com/u/24312770?v=4", + "description": "3D adaptive binary space partitioning and beyond", "topics": [ - "scalereprod" + "point-cloud", + "3d", + "adaptive", + "binary-space-partition", + "reconstruction", + "python" ] }, { - "uid": "github/ropensci-review-tools/autotest", - "url": "https://github.com/ropensci-review-tools/autotest", - "rel": "/software/repository/github/ropensci-review-tools/autotest", - "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", - "description": "Automatic testing of R packages", + "uid": "github/Yingjie4Science/SDGdetector", + "url": "https://github.com/Yingjie4Science/SDGdetector", + "rel": "/software/repository/github/Yingjie4Science/SDGdetector", + "avatar": "https://avatars.githubusercontent.com/u/40079217?v=4", + "description": "A novel R package that can identify and visualize 17 Sustainable Development Goals and associated 169 Targets in text", "topics": [ - "scalereprod" + "r-package", + "sdg", + "sdgs", + "sustainable-development-goals", + "text-mining" ] }, { - "uid": "github/ropensci-review-tools/pkgstats", - "url": "https://github.com/ropensci-review-tools/pkgstats", - "rel": "/software/repository/github/ropensci-review-tools/pkgstats", - "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", - "description": "Historical statistics of every R package ever", - "topics": [ - "scalereprod" - ] + "uid": "github/dkoslicki/TAMPA", + "url": "https://github.com/dkoslicki/TAMPA", + "rel": "/software/repository/github/dkoslicki/TAMPA", + "avatar": "https://avatars.githubusercontent.com/u/6362936?v=4", + "description": "A collection of tools to visualize CAMI profiling outputs", + "topics": [] }, { - "uid": "github/ropensci-review-tools/roreviewapi", - "url": "https://github.com/ropensci-review-tools/roreviewapi", - "rel": "/software/repository/github/ropensci-review-tools/roreviewapi", - "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", - "description": "API endpoint for package reviews via ropensci-review-bot", - "topics": [ - "scalereprod" - ] + "uid": "github/TRIQS/ctseg", + "url": "https://github.com/TRIQS/ctseg", + "rel": "/software/repository/github/TRIQS/ctseg", + "avatar": "https://avatars.githubusercontent.com/u/1140373?v=4", + "description": "A segment picture impurity solver with spin-spin interactions. ", + "topics": [] }, { - "uid": "github/ropensci-review-tools/srr", - "url": "https://github.com/ropensci-review-tools/srr", - "rel": "/software/repository/github/ropensci-review-tools/srr", - "avatar": "https://avatars.githubusercontent.com/u/85607140?v=4", - "description": "Software Review Roclets", + "uid": "github/TRIQS/solid_dmft", + "url": "https://github.com/TRIQS/solid_dmft", + "rel": "/software/repository/github/TRIQS/solid_dmft", + "avatar": "https://avatars.githubusercontent.com/u/1140373?v=4", + "description": "solid_dmft is a versatile python wrapper to perform DFT+DMFT calculations utilizing the TRIQS software library.", "topics": [ - "scalereprod" + "solid-state-physics", + "dmft", + "correlated-electrons" ] }, { - "uid": "github/PrincetonUniversity/FastTemplatePeriodogram", - "url": "https://github.com/PrincetonUniversity/FastTemplatePeriodogram", - "rel": "/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", - "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", - "description": "NlogN algorithm for least-squares fitting of periodic templates to noisy, non-equispaced time-series data.", - "topics": [ - "periodogram", - "nfft", - "fourier-series", - "harmonics", - "lomb-scargle-periodogram", - "frequencies", - "optimal-parameters", - "time-series", - "astronomy", - "periodic", - "signal-processing" - ] + "uid": "github/yangxiaolinyn/Lemon", + "url": "https://github.com/yangxiaolinyn/Lemon", + "rel": "/software/repository/github/yangxiaolinyn/Lemon", + "avatar": "https://avatars.githubusercontent.com/u/78379254?v=4", + "description": null, + "topics": [] }, { - "uid": "github/PrincetonUniversity/athena", - "url": "https://github.com/PrincetonUniversity/athena", - "rel": "/software/repository/github/PrincetonUniversity/athena", - "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", - "description": "Athena++ GRMHD code and adaptive mesh refinement (AMR) framework", - "topics": [] + "uid": "github/montilab/nf-gwas-pipeline", + "url": "https://github.com/montilab/nf-gwas-pipeline", + "rel": "/software/repository/github/montilab/nf-gwas-pipeline", + "avatar": "https://avatars.githubusercontent.com/u/52213315?v=4", + "description": "A Nextflow Genome-Wide Association Study (GWAS) Pipeline", + "topics": [ + "nextflow", + "bioinformatics-pipeline" + ] }, { - "uid": "github/PrincetonUniversity/Athena-Cversion", - "url": "https://github.com/PrincetonUniversity/Athena-Cversion", - "rel": "/software/repository/github/PrincetonUniversity/Athena-Cversion", - "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", - "description": null, + "uid": "github/prdm0/ropenblas", + "url": "https://github.com/prdm0/ropenblas", + "rel": "/software/repository/github/prdm0/ropenblas", + "avatar": "https://avatars.githubusercontent.com/u/4948384?v=4", + "description": "Package to link R language to OpenBLAS library", "topics": [] }, { - "uid": "github/bcerutti/Zeltron-code", - "url": "https://github.com/bcerutti/Zeltron-code", - "rel": "/software/repository/github/bcerutti/Zeltron-code", - "avatar": "https://avatars.githubusercontent.com/u/39200874?v=4", - "description": null, + "uid": "github/yungkipreos/Min-CaLM", + "url": "https://github.com/yungkipreos/Min-CaLM", + "rel": "/software/repository/github/yungkipreos/Min-CaLM", + "avatar": "https://avatars.githubusercontent.com/u/47731788?v=4", + "description": "This python package can perform automated mineral compositional analysis on debris disk spectra. It will determine which minerals are present and what their relative abundances are within the debris disk. This code is used in a paper that has been submitted to the American Journal of Undergraduate Research (AJUR), titled \"An Unbiased Mineral Compositional Analysis Technique for Debris Disks\" by Yung Kipreos and Dr. Inseok Song..", "topics": [] }, { - "uid": "github/mrvollger/fibertools-rs", - "url": "https://github.com/mrvollger/fibertools-rs", - "rel": "/software/repository/github/mrvollger/fibertools-rs", - "avatar": "https://avatars.githubusercontent.com/u/6935283?v=4", - "description": "Tools for fiberseq data written in rust. ", + "uid": "github/lpantano/seqbuster", + "url": "https://github.com/lpantano/seqbuster", + "rel": "/software/repository/github/lpantano/seqbuster", + "avatar": "https://avatars.githubusercontent.com/u/1621788?v=4", + "description": "pipeline for the analysis of small RNA data", "topics": [] }, { - "uid": "github/mrvollger/rustybam", - "url": "https://github.com/mrvollger/rustybam", - "rel": "/software/repository/github/mrvollger/rustybam", - "avatar": "https://avatars.githubusercontent.com/u/6935283?v=4", - "description": "bioinformatics toolkit in rust", + "uid": "github/lpantano/seqcluster", + "url": "https://github.com/lpantano/seqcluster", + "rel": "/software/repository/github/lpantano/seqcluster", + "avatar": "https://avatars.githubusercontent.com/u/1621788?v=4", + "description": "small RNA analysis from NGS data", "topics": [ - "bioinformatics", - "genomics" + "smallrna", + "mirna", + "trna", + "report", + "sequencing" ] }, { - "uid": "github/bmorris3/aesop", - "url": "https://github.com/bmorris3/aesop", - "rel": "/software/repository/github/bmorris3/aesop", - "avatar": "https://avatars.githubusercontent.com/u/3497584?v=4", - "description": "ARC Echelle Spectroscopic Observation Pipeline (aesop)", + "uid": "github/blebon/directChillFoam", + "url": "https://github.com/blebon/directChillFoam", + "rel": "/software/repository/github/blebon/directChillFoam", + "avatar": "https://avatars.githubusercontent.com/u/3886030?v=4", + "description": "OpenFOAM solver for direct chill casting", "topics": [ - "python", - "astronomy", - "spectroscopy" + "casting", + "openfoam", + "computational-fluid-dynamics", + "simulation" ] }, { - "uid": "github/bmorris3/fleck", - "url": "https://github.com/bmorris3/fleck", - "rel": "/software/repository/github/bmorris3/fleck", - "avatar": "https://avatars.githubusercontent.com/u/3497584?v=4", - "description": "Fast approximate light curves for starspot rotational modulation", + "uid": "github/andycasey/sick", + "url": "https://github.com/andycasey/sick", + "rel": "/software/repository/github/andycasey/sick", + "avatar": "https://avatars.githubusercontent.com/u/504436?v=4", + "description": "sick, the spectroscopic inference crank", "topics": [] }, { - "uid": "github/jeremysanders/mbproj2", - "url": "https://github.com/jeremysanders/mbproj2", - "rel": "/software/repository/github/jeremysanders/mbproj2", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Multi-Band x-ray surface brightness PROJector 2", + "uid": "github/andycasey/smhr", + "url": "https://github.com/andycasey/smhr", + "rel": "/software/repository/github/andycasey/smhr", + "avatar": "https://avatars.githubusercontent.com/u/504436?v=4", + "description": "Spectroscopy Made Hard(er)", "topics": [] }, { - "uid": "github/jeremysanders/dsdeproj", - "url": "https://github.com/jeremysanders/dsdeproj", - "rel": "/software/repository/github/jeremysanders/dsdeproj", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Direct Spectral Deprojection code", + "uid": "github/JDabringhausen/BiPoS1", + "url": "https://github.com/JDabringhausen/BiPoS1", + "rel": "/software/repository/github/JDabringhausen/BiPoS1", + "avatar": "https://avatars.githubusercontent.com/u/85243796?v=4", + "description": "This is the first version of the Binary Population Synthesizer (BiPoS1)", "topics": [] }, { - "uid": "github/jeremysanders/contbin", - "url": "https://github.com/jeremysanders/contbin", - "rel": "/software/repository/github/jeremysanders/contbin", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Contour binning code", + "uid": "github/BioDepot/biodepot-launcher", + "url": "https://github.com/BioDepot/biodepot-launcher", + "rel": "/software/repository/github/BioDepot/biodepot-launcher", + "avatar": "https://avatars.githubusercontent.com/u/17000008?v=4", + "description": null, "topics": [] }, { - "uid": "github/jeremysanders/xspec_emcee", - "url": "https://github.com/jeremysanders/xspec_emcee", - "rel": "/software/repository/github/jeremysanders/xspec_emcee", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Use EMCEE to do MCMC analyses of spectra in XSPEC", + "uid": "github/hibridon/hibridon", + "url": "https://github.com/hibridon/hibridon", + "rel": "/software/repository/github/hibridon/hibridon", + "avatar": "https://avatars.githubusercontent.com/u/81297253?v=4", + "description": "Hibridon is a program package to solve the close-coupled equations which occur in the quantum treatment of inelastic atomic and molecular collisions. Gas-phase scattering, photodissociation, collisions of atoms and/or molecules with flat surfaces, and bound states of weakly-bound complexes can be treated", "topics": [] }, { - "uid": "github/jeremysanders/spex_to_xspec", - "url": "https://github.com/jeremysanders/spex_to_xspec", - "rel": "/software/repository/github/jeremysanders/spex_to_xspec", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Tool to dump SPEX spectral models into APEC-format tables", + "uid": "github/rathnakumars/difference-smoothing", + "url": "https://github.com/rathnakumars/difference-smoothing", + "rel": "/software/repository/github/rathnakumars/difference-smoothing", + "avatar": "https://avatars.githubusercontent.com/u/13029625?v=4", + "description": "MATLAB implementation of difference-smoothing algorithm and detailed results obtained by testing the codes on a large sample of simulated light curves from TDC1, described in an article published in MNRAS (arXiv:1704.00706)", "topics": [] }, { - "uid": "github/jeremysanders/ggm", - "url": "https://github.com/jeremysanders/ggm", - "rel": "/software/repository/github/jeremysanders/ggm", - "avatar": "https://avatars.githubusercontent.com/u/274711?v=4", - "description": "Gaussian gradient magnitude filtering of astronomical images", + "uid": "github/SterlingYM/astroPIPS", + "url": "https://github.com/SterlingYM/astroPIPS", + "rel": "/software/repository/github/SterlingYM/astroPIPS", + "avatar": "https://avatars.githubusercontent.com/u/45109159?v=4", + "description": "A set of tools for photometric analysis. Determines the period of short-period variable stars.", + "topics": [ + "python", + "jupyter-notebook", + "astronomy", + "variable-stars", + "pipelines" + ] + }, + { + "uid": "github/jalombar/starsmasher", + "url": "https://github.com/jalombar/starsmasher", + "rel": "/software/repository/github/jalombar/starsmasher", + "avatar": "https://avatars.githubusercontent.com/u/22803843?v=4", + "description": "A Smoothed Particle Hydrodynamics code for smashing stars (and planets)", "topics": [] }, { - "uid": "github/MICCoM/SSAGES-public", - "url": "https://github.com/SSAGESproject/SSAGES", - "rel": "/software/repository/github/MICCoM/SSAGES-public", - "avatar": "https://avatars.githubusercontent.com/u/22507151?v=4", - "description": "Software Suite for Advanced General Ensemble Simulations", + "uid": "github/paranoya/population-synthesis-toolkit", + "url": "https://github.com/paranoya/population-synthesis-toolkit", + "rel": "/software/repository/github/paranoya/population-synthesis-toolkit", + "avatar": "https://avatars.githubusercontent.com/u/24282523?v=4", + "description": "A Python library for stellar population synthesis in galaxies: spectral synthesis, broadband photometry, SED fitting, etc.", "topics": [ - "enhanced-sampling", - "collective-variables", - "lammps", - "gromacs", - "hoomd-blue", - "scientific-machine-learning", - "qbox", - "miccom" + "astronomy-astrophysics", + "galaxies" ] }, { - "uid": "github/galkintool/galkin", - "url": "https://github.com/galkintool/galkin", - "rel": "/software/repository/github/galkintool/galkin", - "avatar": "https://avatars.githubusercontent.com/u/20191718?v=4", + "uid": "github/astrogilda/mirkwood", + "url": "https://github.com/astrogilda/mirkwood", + "rel": "/software/repository/github/astrogilda/mirkwood", + "avatar": "https://avatars.githubusercontent.com/u/23521054?v=4", "description": null, "topics": [] }, { - "uid": "github/andycasey/smhr", - "url": "https://github.com/andycasey/smhr", - "rel": "/software/repository/github/andycasey/smhr", - "avatar": "https://avatars.githubusercontent.com/u/504436?v=4", - "description": "Spectroscopy Made Hard(er)", + "uid": "github/chasmani/piecewise-regression", + "url": "https://github.com/chasmani/piecewise-regression", + "rel": "/software/repository/github/chasmani/piecewise-regression", + "avatar": "https://avatars.githubusercontent.com/u/6584368?v=4", + "description": "piecewise-regression (aka segmented regression) in python. For fitting straight line models to data with one or more breakpoints where the gradient changes. ", + "topics": [ + "segmented-regression", + "piecewise-regression", + "regression", + "data-analysis", + "statistics", + "model-fitting", + "linear-regression", + "python3" + ] + }, + { + "uid": "github/fabiorigamonti/bang", + "url": "https://github.com/FabioRigamonti/BANG", + "rel": "/software/repository/github/fabiorigamonti/bang", + "avatar": "https://avatars.githubusercontent.com/u/65313023?v=4", + "description": "GPU/CPU optimized software for morpho-kinematic galaxy parameter estimation.", "topics": [] }, { - "uid": "github/andycasey/sick", - "url": "https://github.com/andycasey/sick", - "rel": "/software/repository/github/andycasey/sick", - "avatar": "https://avatars.githubusercontent.com/u/504436?v=4", - "description": "sick, the spectroscopic inference crank", + "uid": "github/zpenoyre/OoT", + "url": "https://github.com/zpenoyre/OoT", + "rel": "/software/repository/github/zpenoyre/OoT", + "avatar": "https://avatars.githubusercontent.com/u/20628747?v=4", + "description": "Out-of-Transit Light Curve Generator", "topics": [] }, { - "uid": "github/ALive-research/Slicer-Liver", - "url": "https://github.com/ALive-research/Slicer-Liver", - "rel": "/software/repository/github/ALive-research/Slicer-Liver", - "avatar": "https://avatars.githubusercontent.com/u/65019699?v=4", - "description": "3D Slicer extension for liver analysis and therapy planning", - "topics": [ - "liver", - "visualization", - "analysis", - "3d-slicer-extension", - "surgical-planning" - ] + "uid": "github/zpenoyre/CausticFrog", + "url": "https://github.com/zpenoyre/CausticFrog", + "rel": "/software/repository/github/zpenoyre/CausticFrog", + "avatar": "https://avatars.githubusercontent.com/u/20628747?v=4", + "description": "1D Lagrangian Simulation Package", + "topics": [] }, { - "uid": "github/annacrnn/rebound_fragmentation", - "url": "https://github.com/ANNACRNN/REBOUND_fragmentation", - "rel": "/software/repository/github/annacrnn/rebound_fragmentation", - "avatar": "https://avatars.githubusercontent.com/u/40207212?v=4", - "description": "Fragmentation and bulk composition tracking code for the C version of REBOUND. Based on Childs & Steffen 2021.", - "topics": [ - "n-body", - "module", - "fragmentation", - "composition", - "tracking-algorithm" - ] + "uid": "github/agordon/fastx_toolkit", + "url": "https://github.com/agordon/fastx_toolkit", + "rel": "/software/repository/github/agordon/fastx_toolkit", + "avatar": "https://avatars.githubusercontent.com/u/523057?v=4", + "description": "FASTA/FASTQ pre-processing programs", + "topics": [] }, { - "uid": "github/bareid/cosmoxi2d", - "url": "https://github.com/bareid/cosmoxi2d", - "rel": "/software/repository/github/bareid/cosmoxi2d", - "avatar": "https://avatars.githubusercontent.com/u/4365718?v=4", - "description": "Evaluates the theoretical prediction for correlation function multipoles based on perturbation theory evaluation of the input real space clustering and velocity statistics to the Gaussian streaming model.", + "uid": "github/jpober/21cmSense", + "url": "https://github.com/jpober/21cmSense", + "rel": "/software/repository/github/jpober/21cmSense", + "avatar": "https://avatars.githubusercontent.com/u/1482671?v=4", + "description": "Code for calculating the sensitivity of 21cm experiments to the EoR power spectrum", "topics": [] }, { - "uid": "github/kartheikiyer/dense_basis", - "url": "https://github.com/kartheikiyer/dense_basis", - "rel": "/software/repository/github/kartheikiyer/dense_basis", - "avatar": "https://avatars.githubusercontent.com/u/14657226?v=4", - "description": "Dense Basis SED fitting", - "topics": [ - "sed-fitting", - "galaxy-evolution", - "star-formation-history", - "data-compression" - ] + "uid": "github/mlarichardson/CosmosCanvas", + "url": "https://github.com/mlarichardson/CosmosCanvas", + "rel": "/software/repository/github/mlarichardson/CosmosCanvas", + "avatar": "https://avatars.githubusercontent.com/u/10811587?v=4", + "description": "A library that incorporates Gilles Ferrand's colourspace, creating useful colour maps for different astrophysical properties.", + "topics": [] }, { - "uid": "github/ekerrison/RadioSED", - "url": "https://github.com/ekerrison/RadioSED", - "rel": "/software/repository/github/ekerrison/RadioSED", - "avatar": "https://avatars.githubusercontent.com/u/58801416?v=4", - "description": "Radio SED fitting for AGN", + "uid": "github/mlarichardson/ramses2hsim", + "url": "https://github.com/mlarichardson/ramses2hsim", + "rel": "/software/repository/github/mlarichardson/ramses2hsim", + "avatar": "https://avatars.githubusercontent.com/u/10811587?v=4", + "description": "A simulation pipeline for converting cosmological RAMSES simulations into input FITS cubes for the hsim pipeline.", "topics": [] }, { - "uid": "github/PopovIILab/KrakenParser", - "url": "https://github.com/PopovIILab/KrakenParser", - "rel": "/software/repository/github/PopovIILab/KrakenParser", - "avatar": "https://avatars.githubusercontent.com/u/170358473?v=4", - "description": "\ud83d\uddc2\ufe0fParse multiple Kraken2 reports into CSV files on 6 taxonomical levels", - "topics": [ - "kraken2", - "metagenomic-pipeline", - "metagenomics", - "krakentools" - ] + "uid": "github/RitchieLab/hudson", + "url": "https://github.com/RitchieLab/hudson", + "rel": "/software/repository/github/RitchieLab/hudson", + "avatar": "https://avatars.githubusercontent.com/u/28302846?v=4", + "description": "An R package for creating mirrored Manhattan plots", + "topics": [] }, { - "uid": "github/weecology/retriever", - "url": "https://github.com/weecology/retriever", - "rel": "/software/repository/github/weecology/retriever", - "avatar": "https://avatars3.githubusercontent.com/u/1156696?v=4", - "description": "Quickly download, clean up, and install public datasets into a database management system", - "topics": [ - "data-retrieval", - "dataset", - "python", - "data", - "data-science", - "datasets" - ] + "uid": "github/jacobblum/simDRIFT", + "url": "https://github.com/jacobblum/simDRIFT", + "rel": "/software/repository/github/jacobblum/simDRIFT", + "avatar": "https://avatars.githubusercontent.com/u/77986408?v=4", + "description": "simDRIFT - A software package for massively parallel forward simulation of Pulsed Gradient Spin Echo diffusion weighted MRI experiments on biophysically accurate tissue systems. ", + "topics": [] }, { - "uid": "github/lpfworld/DMPNet", - "url": "https://github.com/lpfworld/DMPNet", - "rel": "/software/repository/github/lpfworld/DMPNet", - "avatar": "https://avatars.githubusercontent.com/u/22807794?v=4", - "description": "DMPNet", + "uid": "github/carlacupcake/hashin_shtrikman_mp", + "url": "https://github.com/carlacupcake/hashin_shtrikman_mp", + "rel": "/software/repository/github/carlacupcake/hashin_shtrikman_mp", + "avatar": "https://avatars.githubusercontent.com/u/13389734?v=4", + "description": null, "topics": [] }, { - "uid": "github/YaleTHz/nelly", - "url": "https://github.com/YaleTHz/nelly", - "rel": "/software/repository/github/YaleTHz/nelly", - "avatar": "https://avatars.githubusercontent.com/u/69858984?v=4", - "description": "Nelly is a package for extracing refractice indices and conductivities from time-domain terahertz spectroscopy data", + "uid": "github/DavidLapous/multipers", + "url": "https://github.com/DavidLapous/multipers", + "rel": "/software/repository/github/DavidLapous/multipers", + "avatar": "https://avatars.githubusercontent.com/u/15857585?v=4", + "description": "[NeurIPS2023,ICML2024] Multiparameter Persistence for Machine Learning ", "topics": [ - "terahertz", - "conductivity", - "spectroscopy", - "refractive-index" + "persistent-homology", + "topological-data-analysis", + "tda", + "python", + "cpp", + "cython", + "neurips-2023", + "icml-2024", + "multiparameter-persistence" ] }, { - "uid": "github/gijut/gnucash", - "url": "https://github.com/gijut/gnucash", - "rel": "/software/repository/github/gijut/gnucash", - "avatar": "https://avatars2.githubusercontent.com/u/12998308?v=4", - "description": "Public Mirror of code.gnucash.org/gnucash", + "uid": "github/BrianAronson/birankr", + "url": "https://github.com/BrianAronson/birankr", + "rel": "/software/repository/github/BrianAronson/birankr", + "avatar": "https://avatars0.githubusercontent.com/u/6536984?v=4", + "description": "CRAN package for estimating various rank (centrality) measures of nodes in bipartite graphs (two-mode networks).", "topics": [] }, { - "uid": "github/pkgw/pwkit", - "url": "https://github.com/pkgw/pwkit", - "rel": "/software/repository/github/pkgw/pwkit", - "avatar": "https://avatars.githubusercontent.com/u/59598?v=4", - "description": "Miscellaneous science/astronomy tools.", - "topics": [] + "uid": "github/mingzehuang/latentcor", + "url": "https://github.com/mingzehuang/latentcor", + "rel": "/software/repository/github/mingzehuang/latentcor", + "avatar": "https://avatars.githubusercontent.com/u/70076112?v=4", + "description": "latentcor is an R package provides estimation for latent correlation with mixed data types (continuous, binary, truncated and ternary).", + "topics": [ + "statistics", + "data-science", + "mixed-types", + "r", + "data-analysis", + "data-mining", + "machine-learning", + "data-structures", + "data-processing" + ] }, { - "uid": "github/Planet-AI-GmbH/tfaip", - "url": "https://github.com/Planet-AI-GmbH/tfaip", - "rel": "/software/repository/github/Planet-AI-GmbH/tfaip", - "avatar": "https://avatars.githubusercontent.com/u/73832289?v=4", - "description": "Python-based research framework for developing, organizing, and deploying Deep Learning models powered by Tensorflow.", + "uid": "github/kircherlab/cfDNA-UniFlow", + "url": "https://github.com/kircherlab/cfDNA-UniFlow", + "rel": "/software/repository/github/kircherlab/cfDNA-UniFlow", + "avatar": "https://avatars.githubusercontent.com/u/26594270?v=4", + "description": "Workflow for preprocessing cfDNA samples.", "topics": [] }, { - "uid": "github/gkulkarni/QLF", - "url": "https://github.com/gkulkarni/QLF", - "rel": "/software/repository/github/gkulkarni/QLF", - "avatar": "https://avatars.githubusercontent.com/u/1303822?v=4", - "description": null, + "uid": "github/kircherlab/ReMM", + "url": "https://github.com/kircherlab/ReMM", + "rel": "/software/repository/github/kircherlab/ReMM", + "avatar": "https://avatars.githubusercontent.com/u/26594270?v=4", + "description": "ReMM score snakemake workflow ", "topics": [] }, { - "uid": "github/sodascience/metasyn", - "url": "https://github.com/sodascience/metasyn", - "rel": "/software/repository/github/sodascience/metasyn", - "avatar": "https://avatars.githubusercontent.com/u/71822308?v=4", - "description": "Transparent and privacy-friendly synthetic data generation", + "uid": "github/dirmeier/surjectors", + "url": "https://github.com/dirmeier/surjectors", + "rel": "/software/repository/github/dirmeier/surjectors", + "avatar": "https://avatars.githubusercontent.com/u/16086606?v=4", + "description": "Surjection layers for density estimation with normalizing flows", "topics": [ - "metadata", - "open-data", - "synthetic-data", - "privacy" + "normalizing-flows", + "python", + "surjections", + "density-estimation", + "bijections" ] }, { - "uid": "github/mjuric/galfast", - "url": "https://github.com/mjuric/galfast", - "rel": "/software/repository/github/mjuric/galfast", - "avatar": "https://avatars.githubusercontent.com/u/620059?v=4", - "description": "Milky Way Mock Catalog Generator", + "uid": "github/sirocco-rt/sirocco", + "url": "https://github.com/sirocco-rt/sirocco", + "rel": "/software/repository/github/sirocco-rt/sirocco", + "avatar": "https://avatars.githubusercontent.com/u/3064657?v=4", + "description": "This is the repository for Sirocco, the radiative transfer code used to model winds in AGN and other systems", "topics": [] }, { - "uid": "github/ideasrule/pyTPCI", - "url": "https://github.com/ideasrule/pyTPCI", - "rel": "/software/repository/github/ideasrule/pyTPCI", - "avatar": "https://avatars.githubusercontent.com/u/1724065?v=4", - "description": "Python version of TPCI", + "uid": "github/Hoecker-Lab/atligator", + "url": "https://github.com/Hoecker-Lab/atligator", + "rel": "/software/repository/github/Hoecker-Lab/atligator", + "avatar": "https://avatars.githubusercontent.com/u/72266843?v=4", + "description": "Analysis and design of protein-protein or protein-peptide interactions based on atlas database.", "topics": [] }, { - "uid": "github/ideasrule/platon", - "url": "https://github.com/ideasrule/platon", - "rel": "/software/repository/github/ideasrule/platon", - "avatar": "https://avatars.githubusercontent.com/u/1724065?v=4", - "description": "Fast exoplanet transmission spectrum calculator", + "uid": "github/debian-tex/texlive-nonbin", + "url": "https://github.com/debian-tex/texlive-nonbin", + "rel": "/software/repository/github/debian-tex/texlive-nonbin", + "avatar": "https://avatars.githubusercontent.com/u/46477164?v=4", + "description": "debian non-bin texlive pkgs", "topics": [] }, { - "uid": "github/OttoStruve/muler", - "url": "https://github.com/OttoStruve/muler", - "rel": "/software/repository/github/OttoStruve/muler", - "avatar": "https://avatars.githubusercontent.com/u/6210657?v=4", - "description": "A Python package for working with pipeline-produced spectra from IGRINS, HPF, and Keck NIRSPEC", - "topics": [ - "astronomy", - "spectroscopy", - "exoplanets", - "stars", - "stellar-atmospheres", - "data-analysis", - "astronomical-algorithms", - "infrared", - "echelle", - "python", - "data-science" - ] - }, - { - "uid": "github/farhanferoz/SkyNet", - "url": "https://github.com/farhanferoz/SkyNet", - "rel": "/software/repository/github/farhanferoz/SkyNet", - "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", - "description": "SkyNet is an efficient and robust neural network training code for machine learning.", + "uid": "github/debian-tex/biber", + "url": "https://github.com/debian-tex/biber", + "rel": "/software/repository/github/debian-tex/biber", + "avatar": "https://avatars.githubusercontent.com/u/46477164?v=4", + "description": "Much-augmented BibTeX replacement for BibLaTeX users", "topics": [] }, { - "uid": "github/farhanferoz/MultiNest", - "url": "https://github.com/farhanferoz/MultiNest", - "rel": "/software/repository/github/farhanferoz/MultiNest", - "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", - "description": "MultiNest is a Bayesian inference tool which calculates the evidence and explores the parameter space which may contain multiple posterior modes and pronounced (curving) degeneracies in moderately high dimensions. ", - "topics": [] + "uid": "github/opencollab/arpack-ng", + "url": "https://github.com/opencollab/arpack-ng", + "rel": "/software/repository/github/opencollab/arpack-ng", + "avatar": "https://avatars.githubusercontent.com/u/7782996?v=4", + "description": "Collection of Fortran77 subroutines designed to solve large scale eigenvalue problems.", + "topics": [ + "eigenvalue", + "linear-algebra", + "arpack", + "parpack" + ] }, { - "uid": "github/farhanferoz/BAMBI", - "url": "https://github.com/farhanferoz/BAMBI", - "rel": "/software/repository/github/farhanferoz/BAMBI", - "avatar": "https://avatars.githubusercontent.com/u/34422685?v=4", + "uid": "github/radio1988/OneStopRNAseq", + "url": "https://github.com/radio1988/OneStopRNAseq", + "rel": "/software/repository/github/radio1988/OneStopRNAseq", + "avatar": "https://avatars.githubusercontent.com/u/11168803?v=4", "description": null, "topics": [] }, { - "uid": "github/Natsiopoulos/ARDL", - "url": "https://github.com/Natsiopoulos/ARDL", - "rel": "/software/repository/github/Natsiopoulos/ARDL", - "avatar": "https://avatars.githubusercontent.com/u/38705190?v=4", - "description": "ARDL, ECM and Bounds-Test for Cointegration", - "topics": [] + "uid": "github/oschwengers/platon", + "url": "https://github.com/oschwengers/platon", + "rel": "/software/repository/github/oschwengers/platon", + "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", + "description": "Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.", + "topics": [ + "microbiology", + "bioinformatics", + "plasmids", + "ngs", + "wgs", + "contigs", + "bacteria", + "assembly" + ] }, { - "uid": "github/r-spatialecology/shar", - "url": "https://github.com/r-spatialecology/shar", - "rel": "/software/repository/github/r-spatialecology/shar", - "avatar": "https://avatars.githubusercontent.com/u/42056187?v=4", - "description": ":package: Analyse species-habitat associations in R", + "uid": "github/oschwengers/referenceseeker", + "url": "https://github.com/oschwengers/referenceseeker", + "rel": "/software/repository/github/oschwengers/referenceseeker", + "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", + "description": "Rapid determination of appropriate reference genomes.", "topics": [ - "landscape-ecology", - "point-pattern-analysis", - "spatial-analysis", - "habitat-association" + "bioinformatics", + "reference-genomes", + "mash", + "refseq", + "wgs", + "microbiology", + "ani" ] }, { - "uid": "github/jiffyclub/palettable", - "url": "https://github.com/jiffyclub/palettable", - "rel": "/software/repository/github/jiffyclub/palettable", - "avatar": "https://avatars.githubusercontent.com/u/920492?v=4", - "description": "Color palettes for Python", + "uid": "github/oschwengers/bakta", + "url": "https://github.com/oschwengers/bakta", + "rel": "/software/repository/github/oschwengers/bakta", + "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", + "description": "Rapid & standardized annotation of bacterial genomes & plasmids", + "topics": [ + "bioinformatics", + "microbial-genomics", + "genome-annotation", + "bacteria", + "bacterial-genomes", + "plasmids" + ] + }, + { + "uid": "github/ratt-ru/breizorro", + "url": "https://github.com/ratt-ru/breizorro", + "rel": "/software/repository/github/ratt-ru/breizorro", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Image masking tool(s) possibly of Breton spiritual origin", "topics": [] }, { - "uid": "github/bioinfo-ut/GenomeTester4", - "url": "https://github.com/bioinfo-ut/GenomeTester4", - "rel": "/software/repository/github/bioinfo-ut/GenomeTester4", - "avatar": "https://avatars.githubusercontent.com/u/12512365?v=4", - "description": "A toolkit for performing set operations - union, intersection and complement - on k-mer lists.", + "uid": "github/ratt-ru/rodrigues", + "url": "https://github.com/ratt-ru/rodrigues", + "rel": "/software/repository/github/ratt-ru/rodrigues", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "web based radio telescope calibration simulation", "topics": [] }, { - "uid": "github/bioinfo-ut/PlasmidSeeker", - "url": "https://github.com/bioinfo-ut/PlasmidSeeker", - "rel": "/software/repository/github/bioinfo-ut/PlasmidSeeker", - "avatar": "https://avatars.githubusercontent.com/u/12512365?v=4", - "description": "A k-mer based program for the identification of known plasmids from whole-genome sequencing reads", + "uid": "github/ratt-ru/PyMORESANE", + "url": "https://github.com/ratt-ru/PyMORESANE", + "rel": "/software/repository/github/ratt-ru/PyMORESANE", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Repository for the Python version of the MORESANE deconvolution algorithm", "topics": [] }, { - "uid": "github/timothyas/xesn", - "url": "https://github.com/timothyas/xesn", - "rel": "/software/repository/github/timothyas/xesn", - "avatar": "https://avatars.githubusercontent.com/u/28659578?v=4", - "description": "Large scale Echo State Networks powered by xarray and dask.", + "uid": "github/ratt-ru/CubiCal", + "url": "https://github.com/ratt-ru/CubiCal", + "rel": "/software/repository/github/ratt-ru/CubiCal", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "A fast radio interferometric calibration suite.", "topics": [] }, { - "uid": "github/artic-network/readucks", - "url": "https://github.com/artic-network/readucks", - "rel": "/software/repository/github/artic-network/readucks", - "avatar": "https://avatars.githubusercontent.com/u/30041437?v=4", - "description": "Nanopore read de-multiplexer", + "uid": "github/ratt-ru/montblanc", + "url": "https://github.com/ratt-ru/montblanc", + "rel": "/software/repository/github/ratt-ru/montblanc", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "GPU-accelerated RIME implementations. An offshoot of the BIRO projects, and one of the foothills of Mt Exaflop.", "topics": [] }, { - "uid": "github/artic-network/fieldbioinformatics", - "url": "https://github.com/artic-network/fieldbioinformatics", - "rel": "/software/repository/github/artic-network/fieldbioinformatics", - "avatar": "https://avatars.githubusercontent.com/u/30041437?v=4", - "description": "The ARTIC field bioinformatics pipeline", + "uid": "github/ratt-ru/solarkat", + "url": "https://github.com/ratt-ru/solarkat", + "rel": "/software/repository/github/ratt-ru/solarkat", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "MeerKAT as a solar telescope", "topics": [] }, { - "uid": "github/klb2/qmkpy", - "url": "https://github.com/klb2/qmkpy", - "rel": "/software/repository/github/klb2/qmkpy", - "avatar": "https://avatars.githubusercontent.com/u/58686048?v=4", - "description": "Python testbed for the Quadratic Multiple Knapsack Problem (QMKP)", + "uid": "github/ratt-ru/Stimela", + "url": "https://github.com/ratt-ru/Stimela", + "rel": "/software/repository/github/ratt-ru/Stimela", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "A containerized radio interferometry scripting framework", "topics": [ - "knapsack-problem", - "operations-research", - "optimization" + "pipelines", + "astronomical-algorithms", + "workflow-management" ] }, { - "uid": "github/p-sira/ellip", - "url": "https://github.com/p-sira/ellip", - "rel": "/software/repository/github/p-sira/ellip", - "avatar": "https://avatars.githubusercontent.com/u/186296676?v=4", - "description": "Elliptic integrals for Rust", - "topics": [ - "elliptic-integrals", - "math", - "rust", - "special-functions" - ] + "uid": "github/ratt-ru/smops", + "url": "https://github.com/ratt-ru/smops", + "rel": "/software/repository/github/ratt-ru/smops", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Interpolate FITS model images over higher frequency intervals", + "topics": [] }, { - "uid": "github/fripon/freeture", - "url": "https://github.com/fripon/freeture", - "rel": "/software/repository/github/fripon/freeture", - "avatar": "https://avatars.githubusercontent.com/u/9007954?v=4", - "description": "A Free software to capTure meteors ", + "uid": "github/ratt-ru/eidos", + "url": "https://github.com/ratt-ru/eidos", + "rel": "/software/repository/github/ratt-ru/eidos", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Modelling primary beams of radio astronomy antennas", "topics": [] }, { - "uid": "github/jrkerns/pylinac", - "url": "https://github.com/jrkerns/pylinac", - "rel": "/software/repository/github/jrkerns/pylinac", - "avatar": "https://avatars.githubusercontent.com/u/4803336?v=4", - "description": "A TG-142 toolkit for doing routine linear accelerator quality assurance", + "uid": "github/ratt-ru/Stimela-classic", + "url": "https://github.com/ratt-ru/Stimela-classic", + "rel": "/software/repository/github/ratt-ru/Stimela-classic", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Containerized radio interferometry scripting framework -- NB: Classic version is no longer in active development, use stimela 2! See README for details.", "topics": [ - "python", - "medical-physics", - "radiation-oncology" + "pipelines", + "astronomical-algorithms", + "workflow-management" ] }, { - "uid": "github/jorgensd/adios4dolfinx", - "url": "https://github.com/jorgensd/adios4dolfinx", - "rel": "/software/repository/github/jorgensd/adios4dolfinx", - "avatar": "https://avatars.githubusercontent.com/u/8554300?v=4", - "description": "Extending DOLFINx with checkpointing functionality", + "uid": "github/ratt-ru/codex-africanus", + "url": "https://github.com/ratt-ru/codex-africanus", + "rel": "/software/repository/github/ratt-ru/codex-africanus", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Radio Astronomy Algorithms Library", "topics": [ - "adios2", - "fenicsx", - "checkpointing", - "mpi-applications" + "radio-astronomy", + "python", + "numba", + "dask" ] }, { - "uid": "github/vocalpy/crowsetta", - "url": "https://github.com/vocalpy/crowsetta", - "rel": "/software/repository/github/vocalpy/crowsetta", - "avatar": "https://avatars.githubusercontent.com/u/99543036?v=4", - "description": "A tool to work with any format for annotating vocalizations", + "uid": "github/ratt-ru/QuartiCal", + "url": "https://github.com/ratt-ru/QuartiCal", + "rel": "/software/repository/github/ratt-ru/QuartiCal", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "CubiCal, but with greater power.", + "topics": [] + }, + { + "uid": "github/ratt-ru/dask-ms", + "url": "https://github.com/ratt-ru/dask-ms", + "rel": "/software/repository/github/ratt-ru/dask-ms", + "avatar": "https://avatars.githubusercontent.com/u/7933570?v=4", + "description": "Implementation of a dask/xarray dataset backed by a CASA MS", "topics": [ - "dataset", - "annotation", - "csv", - "python", - "python3", - "annotation-format", - "birdsong", - "animal-communication", - "animal-vocalizations", - "bioacoustics", - "bioacoustic-analysis" + "dask", + "casacore", + "radio-astronomy", + "xarray" ] }, { - "uid": "github/MNGuenther/allesfitter", - "url": "https://github.com/MNGuenther/allesfitter", - "rel": "/software/repository/github/MNGuenther/allesfitter", - "avatar": "https://avatars.githubusercontent.com/u/11521683?v=4", - "description": "allesfitter is a convenient wrapper around the packages ellc (light curve and RV models), dynesty (static and dynamic nested sampling) emcee (Markov Chain Monte Carlo sampling) and celerite (Gaussian Process models).", + "uid": "github/keckert7/codes", + "url": "https://github.com/keckert7/codes", + "rel": "/software/repository/github/keckert7/codes", + "avatar": "https://avatars.githubusercontent.com/u/10523969?v=4", + "description": null, "topics": [] }, { - "uid": "github/signalling-games-org/evoke", - "url": "https://github.com/signalling-games-org/evoke", - "rel": "/software/repository/github/signalling-games-org/evoke", - "avatar": "https://avatars.githubusercontent.com/u/124157910?v=4", - "description": "A Python package for evolutionary signalling games", + "uid": "github/JMLascar/SUSHI", + "url": "https://github.com/JMLascar/SUSHI", + "rel": "/software/repository/github/JMLascar/SUSHI", + "avatar": "https://avatars.githubusercontent.com/u/54967118?v=4", + "description": null, "topics": [] }, { - "uid": "github/mzemp/halogen", - "url": "https://github.com/mzemp/halogen", - "rel": "/software/repository/github/mzemp/halogen", - "avatar": "https://avatars.githubusercontent.com/u/7420777?v=4", - "description": "Tool to generate spherically symmetric initial conditions for N-body simulations.", - "topics": [] + "uid": "github/Keck-DataReductionPipelines/KcwiDRP", + "url": "https://github.com/Keck-DataReductionPipelines/KcwiDRP", + "rel": "/software/repository/github/Keck-DataReductionPipelines/KcwiDRP", + "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", + "description": "KCWI data reduction pipeline. Developers: Don Neill, Matt Matuszewski, Chris Martin (Caltech)", + "topics": [ + "kcwi", + "keck", + "drp", + "idl" + ] }, { - "uid": "github/ANTsX/ANTs", - "url": "https://github.com/ANTsX/ANTs", - "rel": "/software/repository/github/ANTsX/ANTs", - "avatar": "https://avatars.githubusercontent.com/u/31454717?v=4", - "description": "Advanced Normalization Tools (ANTs) ", - "topics": [] + "uid": "github/Keck-DataReductionPipelines/KCWI_DRP", + "url": "https://github.com/Keck-DataReductionPipelines/KCWI_DRP", + "rel": "/software/repository/github/Keck-DataReductionPipelines/KCWI_DRP", + "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", + "description": "KCWI python DRP", + "topics": [ + "keck", + "kcwi", + "drp", + "python" + ] }, { - "uid": "github/eucp-project/storyboards", - "url": "https://github.com/eucp-project/storyboards", - "rel": "/software/repository/github/eucp-project/storyboards", - "avatar": "https://avatars.githubusercontent.com/u/55438229?v=4", - "description": "Simple web application to show example use cases with some interactivity. (visitors via old url will be redirected to the website with new url)", + "uid": "github/ExoCTK/exoctk", + "url": "https://github.com/ExoCTK/exoctk", + "rel": "/software/repository/github/ExoCTK/exoctk", + "avatar": "https://avatars.githubusercontent.com/u/24390627?v=4", + "description": "The Exoplanet Characterization Tool Kit", "topics": [] }, { - "uid": "github/eucp-project/atlas", - "url": "https://github.com/eucp-project/atlas", - "rel": "/software/repository/github/eucp-project/atlas", - "avatar": "https://avatars.githubusercontent.com/u/55438229?v=4", - "description": "prototype result browser", + "uid": "github/MatthijsHak/MetalDock", + "url": "https://github.com/MatthijsHak/MetalDock", + "rel": "/software/repository/github/MatthijsHak/MetalDock", + "avatar": "https://avatars.githubusercontent.com/u/95848709?v=4", + "description": "Dock organometallic compounds to proteins/DNA/biomolecules", "topics": [] }, { - "uid": "github/rferdman/afr", - "url": "https://github.com/rferdman/afr", - "rel": "/software/repository/github/rferdman/afr", - "avatar": "https://avatars.githubusercontent.com/u/1636743?v=4", - "description": "Software package that includes various routines and tools allowing the user to reduce, process, and manipulate pulsar data, and create times-of-arrival compatible with tempo and tempo2 timing software. ", + "uid": "github/constantAmateur/SoupX", + "url": "https://github.com/constantAmateur/SoupX", + "rel": "/software/repository/github/constantAmateur/SoupX", + "avatar": "https://avatars2.githubusercontent.com/u/1410525?v=4", + "description": "R package to quantify and remove cell free mRNAs from droplet based scRNA-seq data", "topics": [] }, { - "uid": "github/drgmk/vis-r", - "url": "https://github.com/drgmk/vis-r", - "rel": "/software/repository/github/drgmk/vis-r", - "avatar": "https://avatars.githubusercontent.com/u/15953646?v=4", - "description": "fast radial profile modelling for radio interferometric data", + "uid": "github/amoradinejad/limHaloPT", + "url": "https://github.com/amoradinejad/limHaloPT", + "rel": "/software/repository/github/amoradinejad/limHaloPT", + "avatar": "https://avatars.githubusercontent.com/u/25491836?v=4", + "description": "The public repository of limHaloPT (master for the most recent version of the code)", "topics": [] }, { - "uid": "github/DKMS/hapl-o-Mat_WinBin", - "url": "https://github.com/DKMS/Hapl-o-Mat_WinBin", - "rel": "/software/repository/github/DKMS/hapl-o-Mat_WinBin", - "avatar": "https://avatars.githubusercontent.com/u/16760698?v=4", - "description": "Windows binary version of the Graphical User Interface to Hapl-o-Mat. Includes also a binary version of the command line interface.", + "uid": "github/MIC-DKFZ/TractSeg", + "url": "https://github.com/MIC-DKFZ/TractSeg", + "rel": "/software/repository/github/MIC-DKFZ/TractSeg", + "avatar": "https://avatars.githubusercontent.com/u/31731892?v=4", + "description": "Automatic White Matter Bundle Segmentation", "topics": [] }, { - "uid": "github/tofflemire/saphires", - "url": "https://github.com/tofflemire/saphires", - "rel": "/software/repository/github/tofflemire/saphires", - "avatar": "https://avatars.githubusercontent.com/u/5099866?v=4", - "description": "Analysis tools for stellar spectroscopy", + "uid": "github/MIC-DKFZ/HD-BET", + "url": "https://github.com/MIC-DKFZ/HD-BET", + "rel": "/software/repository/github/MIC-DKFZ/HD-BET", + "avatar": "https://avatars.githubusercontent.com/u/31731892?v=4", + "description": "MRI brain extraction tool", "topics": [] }, { - "uid": "github/alekseyzimin/ufasta", - "url": "https://github.com/alekseyzimin/ufasta", - "rel": "/software/repository/github/alekseyzimin/ufasta", - "avatar": "https://avatars.githubusercontent.com/u/27226909?v=4", - "description": "Utility to manipulate fasta files", - "topics": [] + "uid": "github/chainsawriot/oolong", + "url": "https://github.com/chainsawriot/oolong", + "rel": "/software/repository/github/chainsawriot/oolong", + "avatar": "https://avatars1.githubusercontent.com/u/637269?v=4", + "description": "oolong \ud83c\udf75 : create and administrate validation tests for typical automated content analysis tools.", + "topics": [ + "r", + "textanalysis", + "topicmodeling", + "validation" + ] }, { - "uid": "github/dask/dask", - "url": "https://github.com/dask/dask", - "rel": "/software/repository/github/dask/dask", - "avatar": "https://avatars1.githubusercontent.com/u/17131925?v=4", - "description": "Parallel computing with task scheduling", + "uid": "github/chainsawriot/sweater", + "url": "https://github.com/chainsawriot/sweater", + "rel": "/software/repository/github/chainsawriot/sweater", + "avatar": "https://avatars.githubusercontent.com/u/637269?v=4", + "description": "\ud83d\udc5a Speedy Word Embedding Association Test & Extras using R", "topics": [ - "dask", - "python", - "pydata", - "numpy", - "pandas", - "scikit-learn", - "scipy" + "r", + "wordembedding", + "bias-detection", + "textanalysis" ] }, { - "uid": "github/kkma89/dmcalc", - "url": "https://github.com/kkma89/dmcalc", - "rel": "/software/repository/github/kkma89/dmcalc", - "avatar": "https://avatars.githubusercontent.com/u/44204165?v=4", - "description": "Python code to calculate in-band dispersion measure of pulsars", + "uid": "github/trixi-framework/TrixiParticles.jl", + "url": "https://github.com/trixi-framework/TrixiParticles.jl", + "rel": "/software/repository/github/trixi-framework/TrixiParticles.jl", + "avatar": "https://avatars.githubusercontent.com/u/67895161?v=4", + "description": "TrixiParticles.jl: Particle-based multiphysics simulations in Julia", + "topics": [ + "julia", + "multiphysics", + "simulation", + "smoothed-particle-hydrodynamics" + ] + }, + { + "uid": "github/trixi-framework/HOHQMesh", + "url": "https://github.com/trixi-framework/HOHQMesh", + "rel": "/software/repository/github/trixi-framework/HOHQMesh", + "avatar": "https://avatars.githubusercontent.com/u/67895161?v=4", + "description": "High Order Hex-Quad Mesh (HOHQMesh) package to automatically generate all-quadrilateral meshes with high order boundary information.", "topics": [] }, { - "uid": "github/LangeLab/SQuAPP", - "url": "https://github.com/LangeLab/SQuAPP", - "rel": "/software/repository/github/LangeLab/SQuAPP", - "avatar": "https://avatars.githubusercontent.com/u/22403445?v=4", - "description": "Shiny App allows streamlined analysis of multiple levels of proteomics data.", + "uid": "github/bancaditalia/black-it", + "url": "https://github.com/bancaditalia/black-it", + "rel": "/software/repository/github/bancaditalia/black-it", + "avatar": "https://avatars.githubusercontent.com/u/14347148?v=4", + "description": "Black-box abm calibration kit by the Bank of Italy", "topics": [ - "shiny", - "proteomics", - "peptidomics", - "interactive-apps", - "data-analysis", - "bioinformatics-tool" + "agent-based-modeling", + "calibration-toolbox" ] }, { - "uid": "github/seisman/HinetPy", - "url": "https://github.com/seisman/HinetPy", - "rel": "/software/repository/github/seisman/HinetPy", - "avatar": "https://avatars.githubusercontent.com/u/3974108?v=4", - "description": "A Python package for accessing and processing NIED Hi-net seismic data.", + "uid": "github/ComputationalBiomechanicsLab/opensim-creator", + "url": "https://github.com/ComputationalBiomechanicsLab/opensim-creator", + "rel": "/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", + "avatar": "https://avatars.githubusercontent.com/u/65425720?v=4", + "description": "A UI for building OpenSim models", "topics": [ - "python", - "seismology", - "sac", - "win32", - "hinet" + "biomechanics", + "opensim", + "physics-simulation" ] }, { - "uid": "github/BasilioRuiz/SIR-code", - "url": "https://github.com/BasilioRuiz/SIR-code", - "rel": "/software/repository/github/BasilioRuiz/SIR-code", - "avatar": "https://avatars.githubusercontent.com/u/27848748?v=4", - "description": null, + "uid": "github/logological/gpp", + "url": "https://github.com/logological/gpp", + "rel": "/software/repository/github/logological/gpp", + "avatar": "https://avatars2.githubusercontent.com/u/831326?v=4", + "description": "GPP, a generic preprocessor", "topics": [] }, { - "uid": "github/FarnazFouladi/HashSeq_Manuscript", - "url": "https://github.com/FarnazFouladi/HashSeq_Manuscript", - "rel": "/software/repository/github/FarnazFouladi/HashSeq_Manuscript", - "avatar": "https://avatars.githubusercontent.com/u/33106787?v=4", - "description": null, - "topics": [] + "uid": "github/ropenscilabs/allcontributors", + "url": "https://github.com/ropenscilabs/allcontributors", + "rel": "/software/repository/github/ropenscilabs/allcontributors", + "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", + "description": "all-contributions as an R package", + "topics": [ + "scalereprod" + ] }, { - "uid": "github/wcxve/elisa", - "url": "https://github.com/wcxve/elisa", - "rel": "/software/repository/github/wcxve/elisa", - "avatar": "https://avatars.githubusercontent.com/u/58248583?v=4", - "description": "Efficient library for spectral analysis in high-energy astrophysics.", + "uid": "github/ropenscilabs/r2readthedocs", + "url": "https://github.com/ropenscilabs/r2readthedocs", + "rel": "/software/repository/github/ropenscilabs/r2readthedocs", + "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", + "description": "Convert R package documentation to a 'readthedocs' website", "topics": [ - "spectral-analysis", - "python", - "astrophysics", - "astronomy", - "jax", - "numpyro", - "elisa", - "gamma-ray", - "x-ray" + "scalereprod" ] }, { - "uid": "github/biocore/emperor", - "url": "https://github.com/biocore/emperor", - "rel": "/software/repository/github/biocore/emperor", - "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", - "description": "Emperor a tool for the analysis and visualization of large microbial ecology datasets", + "uid": "github/ropenscilabs/gendercoder", + "url": "https://github.com/ropenscilabs/gendercoder", + "rel": "/software/repository/github/ropenscilabs/gendercoder", + "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", + "description": "Creating R package to code free text gender responses", "topics": [ - "microbiome", - "visualization", - "emperor", - "python", - "bioinformatics", - "ordination", - "biplots" + "ozunconf18", + "unconf", + "r", + "r-package", + "rstats", + "gender-diversity", + "gender-diversity", + "ozunconf18", + "unconf", + "data-extraction" ] }, { - "uid": "github/biocore/unifrac", - "url": "https://github.com/biocore/unifrac", - "rel": "/software/repository/github/biocore/unifrac", - "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", - "description": "high-performance phylogenetic diversity calculations (dev)", + "uid": "github/ropenscilabs/qcoder", + "url": "https://github.com/ropenscilabs/qcoder", + "rel": "/software/repository/github/ropenscilabs/qcoder", + "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", + "description": "Lightweight package to do qualitative coding", + "topics": [ + "unconf18", + "r", + "r-package", + "rstats", + "unconf", + "unconf", + "unconf18", + "data-extraction" + ] + }, + { + "uid": "github/dipangwvu/SPEGID", + "url": "https://github.com/dipangwvu/SPEGID", + "rel": "/software/repository/github/dipangwvu/SPEGID", + "avatar": "https://avatars.githubusercontent.com/u/22922797?v=4", + "description": "Single-pulse Search Approach", "topics": [] }, { - "uid": "github/biocore/unifrac-binaries", - "url": "https://github.com/biocore/unifrac-binaries", - "rel": "/software/repository/github/biocore/unifrac-binaries", - "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", - "description": "Fast phylogenetic diversity calculations", + "uid": "github/sahasuparna/DeMoS", + "url": "https://github.com/sahasuparna/DeMoS", + "rel": "/software/repository/github/sahasuparna/DeMoS", + "avatar": "https://avatars.githubusercontent.com/u/32774833?v=4", + "description": null, "topics": [] }, { - "uid": "github/biocore/sortmerna", - "url": "https://github.com/biocore/sortmerna", - "rel": "/software/repository/github/biocore/sortmerna", - "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", - "description": "SortMeRNA: next-generation sequence filtering and alignment tool", - "topics": [ - "cpp", - "python", - "alignment", - "bioinformatics" - ] + "uid": "github/Astroua/TurbuStat", + "url": "https://github.com/Astroua/TurbuStat", + "rel": "/software/repository/github/Astroua/TurbuStat", + "avatar": "https://avatars.githubusercontent.com/u/5502523?v=4", + "description": "Statistics of Turbulence Python Package", + "topics": [] }, { - "uid": "github/biocore/scikit-bio", - "url": "https://github.com/biocore/scikit-bio", - "rel": "/software/repository/github/biocore/scikit-bio", - "avatar": "https://avatars3.githubusercontent.com/u/6241857?v=4", - "description": "scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.", + "uid": "github/Astroua/SCIMES", + "url": "https://github.com/Astroua/SCIMES", + "rel": "/software/repository/github/Astroua/SCIMES", + "avatar": "https://avatars.githubusercontent.com/u/5502523?v=4", + "description": "Spectral Clustering for Interstellar Molecular Emission Segmentation", "topics": [] }, { - "uid": "github/biocore/deblur", - "url": "https://github.com/biocore/deblur", - "rel": "/software/repository/github/biocore/deblur", - "avatar": "https://avatars.githubusercontent.com/u/6241857?v=4", - "description": "Deblur is a greedy deconvolution algorithm based on known read error profiles.", + "uid": "github/spjuhel/BoARIO", + "url": "https://github.com/spjuhel/BoARIO", + "rel": "/software/repository/github/spjuhel/BoARIO", + "avatar": "https://avatars.githubusercontent.com/u/10011382?v=4", + "description": "Python implementation of ARIO model", "topics": [] }, { - "uid": "github/thraraujo/pysymmpol", - "url": "https://github.com/thraraujo/pysymmpol", - "rel": "/software/repository/github/thraraujo/pysymmpol", - "avatar": "https://avatars.githubusercontent.com/u/74145572?v=4", - "description": "A Python package for calculating and performing basic manipulations on symmetric polynomials.", - "topics": [ - "combinatorics", - "jupyerlab", - "physics", - "python" - ] + "uid": "github/nanoporetech/ont_fast5_api", + "url": "https://github.com/nanoporetech/ont_fast5_api", + "rel": "/software/repository/github/nanoporetech/ont_fast5_api", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Oxford Nanopore Technologies fast5 API software", + "topics": [] }, { - "uid": "github/mtlam/PyPulse", - "url": "https://github.com/mtlam/PyPulse", - "rel": "/software/repository/github/mtlam/PyPulse", - "avatar": "https://avatars.githubusercontent.com/u/9340836?v=4", - "description": "Python package for handling and analyzing PSRFITS files", - "topics": [ - "psrfits", - "python", - "pulsar", - "psrchive" - ] + "uid": "github/nanoporetech/flappie", + "url": "https://github.com/nanoporetech/flappie", + "rel": "/software/repository/github/nanoporetech/flappie", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Flip-flop basecaller for Oxford Nanopore reads", + "topics": [] }, { - "uid": "github/JuliaQuantumControl/GRAPE.jl", - "url": "https://github.com/JuliaQuantumControl/GRAPE.jl", - "rel": "/software/repository/github/JuliaQuantumControl/GRAPE.jl", - "avatar": "https://avatars.githubusercontent.com/u/88603846?v=4", - "description": "Gradient Ascent Pulse Engineering in Julia", + "uid": "github/nanoporetech/dorado", + "url": "https://github.com/nanoporetech/dorado", + "rel": "/software/repository/github/nanoporetech/dorado", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Oxford Nanopore's Basecaller", "topics": [ - "julia", - "grape", - "quantum", - "optimal-control" + "basecalling", + "libtorch", + "nanopore", + "genomics" ] }, { - "uid": "github/GreenBankObservatory/gbtgridder", - "url": "https://github.com/GreenBankObservatory/gbtgridder", - "rel": "/software/repository/github/GreenBankObservatory/gbtgridder", - "avatar": "https://avatars.githubusercontent.com/u/20340212?v=4", - "description": "A stand-alone spectral gridder and imager for the Green Bank Telescope", + "uid": "github/nanoporetech/pomoxis", + "url": "https://github.com/nanoporetech/pomoxis", + "rel": "/software/repository/github/nanoporetech/pomoxis", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Analysis components from Oxford Nanopore Research", "topics": [] }, { - "uid": "github/IKNL/vantage6", - "url": "https://github.com/IKNL/vantage6", - "rel": "/software/repository/github/IKNL/vantage6", - "avatar": "https://avatars.githubusercontent.com/u/39300115?v=4", - "description": "Docker CLI package for the vantage6 infrastructure", + "uid": "github/nanoporetech/pinfish", + "url": "https://github.com/nanoporetech/pinfish", + "rel": "/software/repository/github/nanoporetech/pinfish", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Tools to annotate genomes using long read transcriptomics data", "topics": [ - "federated-learning", - "multi-party-computation", - "data-science", - "distributed-learning" + "rna-seq", + "cdna", + "transcriptomics", + "genome-annotation", + "nanopore" ] }, { - "uid": "github/tjlcbakx/redshift-search-graphs", - "url": "https://github.com/tjlcbakx/redshift-search-graphs", - "rel": "/software/repository/github/tjlcbakx/redshift-search-graphs", - "avatar": "https://avatars.githubusercontent.com/u/12699391?v=4", - "description": "Efficient analysis of bandwidth coverage and spectral lines for finding z-specs", - "topics": [] - }, - { - "uid": "github/berczik/phi-GPU-mole", - "url": "https://github.com/berczik/phi-GPU-mole", - "rel": "/software/repository/github/berczik/phi-GPU-mole", - "avatar": "https://avatars.githubusercontent.com/u/109957403?v=4", - "description": "Parallel Hermite Integration on GPU (Direct N-body on MOLE-8.5 cluster)", + "uid": "github/nanoporetech/index.html#", + "url": null, + "rel": "/software/repository/github/nanoporetech/index.html#", + "avatar": "", + "description": "a suite of tools primarily for the identification of modified nucleotides from nanopore sequencing data.", "topics": [] }, { - "uid": "github/neuromodulation/py_neuromodulation", - "url": "https://github.com/neuromodulation/py_neuromodulation", - "rel": "/software/repository/github/neuromodulation/py_neuromodulation", - "avatar": "https://avatars.githubusercontent.com/u/58917760?v=4", - "description": "Real-time analysis of intracranial neurophysiology recordings.", + "uid": "github/nanoporetech/pychopper", + "url": "https://github.com/nanoporetech/pychopper", + "rel": "/software/repository/github/nanoporetech/pychopper", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "A tool to identify, orient, trim and rescue full length cDNA reads", "topics": [ - "python", - "deep-brain-stimulation", - "electrocorticography", - "ecog", - "dbs", - "machine-learning", - "real-time" + "rna-seq", + "cdna", + "transcriptomics", + "nanopore", + "full-length" ] }, { - "uid": "github/bioinform/somaticseq", - "url": "https://github.com/bioinform/somaticseq", - "rel": "/software/repository/github/bioinform/somaticseq", - "avatar": "https://avatars.githubusercontent.com/u/7563198?v=4", - "description": "An ensemble approach to accurately detect somatic mutations using SomaticSeq", + "uid": "github/nanoporetech/megalodon", + "url": "https://github.com/nanoporetech/megalodon", + "rel": "/software/repository/github/nanoporetech/megalodon", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": " Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network output to a reference genome/transriptome.", "topics": [ - "somatic-variants", - "cancer-genomics" + "basecalling", + "epigenetics", + "variant-calling", + "guppy" ] }, { - "uid": "github/usnistgov/imppy3d", - "url": "https://github.com/usnistgov/imppy3d", - "rel": "/software/repository/github/usnistgov/imppy3d", - "avatar": "https://avatars.githubusercontent.com/u/5330158?v=4", - "description": "Image processing in python for 3d image stacks", - "topics": [] - }, - { - "uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", - "url": "https://github.com/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", - "rel": "/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", - "avatar": "https://avatars.githubusercontent.com/u/110973012?v=4", - "description": "This project analyzes spectroscopic data to detect helium, oxygen, and heliox in O and B-type stars, neutron stars, and white dwarfs. Using tools like SDSS and Astropy, it provides insights into stellar compositions and evolution through data visualization and analysis.", + "uid": "github/nanoporetech/tombo", + "url": "https://github.com/nanoporetech/tombo", + "rel": "/software/repository/github/nanoporetech/tombo", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Tombo is a suite of tools primarily for the identification of modified nucleotides from raw nanopore sequencing data. ", "topics": [ - "spectroscopy", - "stellar-composition" + "epigenetics" ] }, { - "uid": "github/SzokeMark-Andor/AstroDataProcessing", - "url": "https://github.com/SzokeMark-Andor/AstroDataProcessing", - "rel": "/software/repository/github/SzokeMark-Andor/AstroDataProcessing", - "avatar": "https://avatars.githubusercontent.com/u/110973012?v=4", - "description": "This repository contains scripts and tools for analyzing and visualizing astronomical data, specifically targeting the moment-0 maps of NGC 0628 using various methods.", - "topics": [] - }, - { - "uid": "github/bcalden/ClusterPyXT", - "url": "https://github.com/bcalden/ClusterPyXT", - "rel": "/software/repository/github/bcalden/ClusterPyXT", - "avatar": "https://avatars.githubusercontent.com/u/10778805?v=4", - "description": "The Galaxy Cluster \u2018Pypeline\u2019 for X-ray Temperature Maps", + "uid": "github/nanoporetech/medaka", + "url": "https://github.com/nanoporetech/medaka", + "rel": "/software/repository/github/nanoporetech/medaka", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Sequence correction provided by ONT Research", "topics": [ - "galaxy-clusters", - "pipeline", - "astronomy", - "x-ray-astronomy", - "astrophysics", - "spectral-analysis", - "cosmology" + "nanopore", + "medaka" ] }, { - "uid": "github/annagraff/densify", - "url": "https://github.com/annagraff/densify", - "rel": "/software/repository/github/annagraff/densify", - "avatar": "https://avatars.githubusercontent.com/u/42563257?v=4", - "description": null, + "uid": "github/nanoporetech/qcat", + "url": "https://github.com/nanoporetech/qcat", + "rel": "/software/repository/github/nanoporetech/qcat", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": " qcat is a Python command-line tool for demultiplexing Oxford Nanopore reads from FASTQ files.", "topics": [] }, { - "uid": "github/songlabcodes/MSC", - "url": "https://github.com/songlabcodes/MSC", - "rel": "/software/repository/github/songlabcodes/MSC", - "avatar": "https://avatars.githubusercontent.com/u/141258673?v=4", - "description": "single-cell multiscale clustering repository", + "uid": "github/nanoporetech/scrappie", + "url": "https://github.com/nanoporetech/scrappie", + "rel": "/software/repository/github/nanoporetech/scrappie", + "avatar": "https://avatars.githubusercontent.com/u/7668184?v=4", + "description": "Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group", "topics": [] }, { - "uid": "github/stefanofisc/dartvetter_apj", - "url": "https://github.com/stefanofisc/dartvetter_apj", - "rel": "/software/repository/github/stefanofisc/dartvetter_apj", - "avatar": "https://avatars.githubusercontent.com/u/47246021?v=4", + "uid": "github/eEcoLiDAR/laserchicken", + "url": "https://github.com/eEcoLiDAR/laserchicken", + "rel": "/software/repository/github/eEcoLiDAR/laserchicken", + "avatar": "https://avatars3.githubusercontent.com/u/29599373?v=4", "description": null, "topics": [] }, { - "uid": "github/prajwel/curvit", - "url": "https://github.com/prajwel/curvit", - "rel": "/software/repository/github/prajwel/curvit", - "avatar": "https://avatars.githubusercontent.com/u/1685962?v=4", - "description": "Create light curves from UVIT data.", - "topics": [ - "astronomy", - "uvit-data", - "ultraviolet", - "variability", - "python", - "science", - "lightcurves", - "astrosat", - "uvit", - "light-curves", - "instrument-coordinate" - ] + "uid": "github/eEcoLiDAR/Laserfarm", + "url": "https://github.com/eEcoLiDAR/Laserfarm", + "rel": "/software/repository/github/eEcoLiDAR/Laserfarm", + "avatar": "https://avatars.githubusercontent.com/u/29599373?v=4", + "description": "Laserchicken Framework for Applications in Research in Macro-ecology", + "topics": [] }, { - "uid": "github/bokunoBike/m6AGE", - "url": "https://github.com/bokunoBike/m6AGE", - "rel": "/software/repository/github/bokunoBike/m6AGE", - "avatar": "https://avatars.githubusercontent.com/u/31384108?v=4", - "description": "A predictor for m6A sites.", + "uid": "github/mkenworthy/exorings", + "url": "https://github.com/mkenworthy/exorings", + "rel": "/software/repository/github/mkenworthy/exorings", + "avatar": "https://avatars.githubusercontent.com/u/1846189?v=4", + "description": "Tools for fitting and displaying giant extrasolar planet ring systems.", "topics": [] }, { - "uid": "github/biod/sambamba", - "url": "https://github.com/biod/sambamba", - "rel": "/software/repository/github/biod/sambamba", - "avatar": "https://avatars.githubusercontent.com/u/3667078?v=4", - "description": "Tools for working with SAM/BAM data", + "uid": "github/tobiasrausch/alfred", + "url": "https://github.com/tobiasrausch/alfred", + "rel": "/software/repository/github/tobiasrausch/alfred", + "avatar": "https://avatars1.githubusercontent.com/u/5946458?v=4", + "description": "BAM Statistics, Feature Counting and Annotation", "topics": [ - "sam", - "bam", - "bioinformatics" + "insert-size", + "coverage-distribution", + "sequencing", + "quality", + "read-counts", + "quality-control", + "alfred", + "alignment-metrics", + "feature-counting" ] }, { - "uid": "github/oruhnau/when2heat", - "url": "https://github.com/oruhnau/when2heat", - "rel": "/software/repository/github/oruhnau/when2heat", - "avatar": "https://avatars2.githubusercontent.com/u/40352101?v=4", - "description": "Heating Profiles", - "topics": [] + "uid": "github/tobiasrausch/lorax", + "url": "https://github.com/tobiasrausch/lorax", + "rel": "/software/repository/github/tobiasrausch/lorax", + "avatar": "https://avatars.githubusercontent.com/u/5946458?v=4", + "description": "A long-read analysis toolbox for cancer genomics", + "topics": [ + "long-reads", + "long-read-sequencing", + "cancer-genomics", + "genomics", + "bioinformatics", + "telomere", + "amplicon" + ] }, { - "uid": "github/fredericlemoine/goalign", - "url": "https://github.com/evolbioinfo/goalign", - "rel": "/software/repository/github/fredericlemoine/goalign", - "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", - "description": "Goalign is a set of command line tools and an API to manipulate multiple alignments. It is implemented in Go language.", + "uid": "github/tobiasrausch/wally", + "url": "https://github.com/tobiasrausch/wally", + "rel": "/software/repository/github/tobiasrausch/wally", + "avatar": "https://avatars.githubusercontent.com/u/5946458?v=4", + "description": "Wally: Visualization of aligned sequencing reads and contigs", "topics": [ - "phylogeny", + "genomics", + "sequencing", + "visualization", "alignment", - "phylip", - "fasta", - "phylip-alignment", - "nexus" + "sequencing-data", + "mapping", + "plotting", + "assembly", + "contigs" ] }, { - "uid": "github/bandframework/Taweret", - "url": "https://github.com/bandframework/Taweret", - "rel": "/software/repository/github/bandframework/Taweret", - "avatar": "https://avatars.githubusercontent.com/u/63761723?v=4", - "description": "Python package for Bayesian Model Mixing", - "topics": [ - "bayesian-model-mixing", - "bayesian-statistics", - "regression-trees" - ] + "uid": "github/hpdps-group/SolarZip", + "url": "https://github.com/hpdps-group/SolarZip", + "rel": "/software/repository/github/hpdps-group/SolarZip", + "avatar": "https://avatars.githubusercontent.com/u/64717357?v=4", + "description": "SolarZip\uff1aAn efficient and adaptive compression framework for Sloar EUV data", + "topics": [] }, { - "uid": "github/PCMSolver/pcmsolver", - "url": "https://github.com/PCMSolver/pcmsolver", - "rel": "/software/repository/github/PCMSolver/pcmsolver", - "avatar": "https://avatars.githubusercontent.com/u/8494579?v=4", - "description": "An API for the Polarizable Continuum Model", + "uid": "github/finagle29/DBSP_DRP", + "url": "https://github.com/finagle29/DBSP_DRP", + "rel": "/software/repository/github/finagle29/DBSP_DRP", + "avatar": "https://avatars.githubusercontent.com/u/5816532?v=4", + "description": "Fully-automated data reduction pipeline for DBSP built with PypeIt", "topics": [] }, { - "uid": "github/florent-leclercq/pyselfi", - "url": "https://github.com/florent-leclercq/pyselfi", - "rel": "/software/repository/github/florent-leclercq/pyselfi", - "avatar": "https://avatars.githubusercontent.com/u/17030569?v=4", - "description": "Simulator Expansion for Likelihood-Free Inference (SELFI): a python implementation", + "uid": "github/CornellLabofOrnithology/auk", + "url": "https://github.com/CornellLabofOrnithology/auk", + "rel": "/software/repository/github/CornellLabofOrnithology/auk", + "avatar": "https://avatars.githubusercontent.com/u/1395442?v=4", + "description": "Working with eBird data in R", "topics": [ - "bayesian-data-analysis", - "likelihood-free-inference", - "approximate-bayesian-computation", - "cosmology", - "large-scale-structure", - "galaxy-clustering" + "r", + "ebird", + "dataset", + "dataset", + "ebird", + "data-access" ] }, { - "uid": "github/astro-seanwhy/ExoInt", - "url": "https://github.com/astro-seanwhy/ExoInt", - "rel": "/software/repository/github/astro-seanwhy/ExoInt", - "avatar": "https://avatars.githubusercontent.com/u/30588030?v=4", - "description": "Rocky planets as devolatilized stars (Source codes for Wang et al. 2019, MNRAS, doi.org/10.1093/mnras/sty2749). Purpose: devolatilize stellar abundances to produce rocky exoplanetary bulk composition, with which constrain the modelling of the exoplanet interiors. ", + "uid": "github/MelanieKahl/MechAnalyze", + "url": "https://github.com/MelanieKahl/MechAnalyze", + "rel": "/software/repository/github/MelanieKahl/MechAnalyze", + "avatar": "https://avatars.githubusercontent.com/u/63041177?v=4", + "description": "an algorithm for standardization and automation of unconfined compression test analysis", "topics": [] }, { - "uid": "github/EmmanuelSchaan/LensQuEst", - "url": "https://github.com/EmmanuelSchaan/LensQuEst", - "rel": "/software/repository/github/EmmanuelSchaan/LensQuEst", - "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", - "description": "CMB lensing: standard quadratic estimator, shear and magnification (https://arxiv.org/abs/1804.06403).", + "uid": "github/alphaparrot/ExoPlaSim", + "url": "https://github.com/alphaparrot/ExoPlaSim", + "rel": "/software/repository/github/alphaparrot/ExoPlaSim", + "avatar": "https://avatars.githubusercontent.com/u/14878016?v=4", + "description": "Exoplanet Planet Simulator (PlaSim extended for different planet types (including tidally-locked) and evolution on geological timescales--glaciers and carbon cycle)", "topics": [] }, { - "uid": "github/EmmanuelSchaan/ThumbStack", - "url": "https://github.com/EmmanuelSchaan/ThumbStack", - "rel": "/software/repository/github/EmmanuelSchaan/ThumbStack", - "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", + "uid": "github/tinglabs/scAIDE", + "url": "https://github.com/tinglabs/scAIDE", + "rel": "/software/repository/github/tinglabs/scAIDE", + "avatar": "https://avatars.githubusercontent.com/u/63091741?v=4", "description": null, "topics": [] }, { - "uid": "github/EmmanuelSchaan/HaloGen", - "url": "https://github.com/EmmanuelSchaan/HaloGen", - "rel": "/software/repository/github/EmmanuelSchaan/HaloGen", - "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", - "description": "Modular halo model code for matter, galaxies, lensing, tSZ and CIB.", + "uid": "github/nextflow-io/nextflow", + "url": "https://github.com/nextflow-io/nextflow", + "rel": "/software/repository/github/nextflow-io/nextflow", + "avatar": "https://avatars3.githubusercontent.com/u/6698688?v=4", + "description": "A DSL for data-driven computational pipelines", + "topics": [ + "bioinformatics", + "workflow-engine", + "pipeline", + "pipeline-framework", + "nextflow", + "cloud", + "groovy", + "sge", + "slurm", + "aws", + "docker", + "singularity", + "hpc", + "singularity-containers", + "reproducible-science", + "reproducible-research", + "dataflow" + ] + }, + { + "uid": "github/mrilikecoding/StreamPoseML", + "url": "https://github.com/mrilikecoding/StreamPoseML", + "rel": "/software/repository/github/mrilikecoding/StreamPoseML", + "avatar": "https://avatars.githubusercontent.com/u/3507761?v=4", + "description": "pose estimation / ML model wrapper and annotation utility", "topics": [] }, { - "uid": "github/EmmanuelSchaan/LaSSI", - "url": "https://github.com/EmmanuelSchaan/LaSSI", - "rel": "/software/repository/github/EmmanuelSchaan/LaSSI", - "avatar": "https://avatars.githubusercontent.com/u/2760268?v=4", - "description": "Lightweight Fisher forecast for LSS.", + "uid": "github/vocalpy/crowsetta", + "url": "https://github.com/vocalpy/crowsetta", + "rel": "/software/repository/github/vocalpy/crowsetta", + "avatar": "https://avatars.githubusercontent.com/u/99543036?v=4", + "description": "A tool to work with any format for annotating vocalizations", + "topics": [ + "dataset", + "annotation", + "csv", + "python", + "python3", + "annotation-format", + "birdsong", + "animal-communication", + "animal-vocalizations", + "bioacoustics", + "bioacoustic-analysis" + ] + }, + { + "uid": "github/simpeg/aurora", + "url": "https://github.com/simpeg/aurora", + "rel": "/software/repository/github/simpeg/aurora", + "avatar": "https://avatars.githubusercontent.com/u/6043842?v=4", + "description": "software for processing natural source electromagnetic data ", + "topics": [] + }, + { + "uid": "github/highamm/sptotal", + "url": "https://github.com/highamm/sptotal", + "rel": "/software/repository/github/highamm/sptotal", + "avatar": "https://avatars.githubusercontent.com/u/34220951?v=4", + "description": "Package for Fitting Spatial Linear Models and Predicting Total Abundances for Finite Populations", "topics": [] }, { - "uid": "github/CoastEgo/microlux", - "url": "https://github.com/CoastEgo/microlux", - "rel": "/software/repository/github/CoastEgo/microlux", - "avatar": "https://avatars.githubusercontent.com/u/117350929?v=4", - "description": "Implementation of automatic differentiation in VBozza's BinaryLensing", - "topics": [ - "astronomy", - "jax", - "microlensing", - "gravitational-lensing" - ] + "uid": "github/samhforbes/PupillometryR", + "url": "https://github.com/samhforbes/PupillometryR", + "rel": "/software/repository/github/samhforbes/PupillometryR", + "avatar": "https://avatars3.githubusercontent.com/u/18288098?v=4", + "description": "An R package for preparing and analysing pupillometry data", + "topics": [] }, { - "uid": "github/NLESC-JCER/QMCblip", - "url": "https://github.com/NLESC-JCER/QMCblip", - "rel": "/software/repository/github/NLESC-JCER/QMCblip", - "avatar": "https://avatars.githubusercontent.com/u/44467875?v=4", - "description": null, + "uid": "github/JustinYKC/FEPOPS", + "url": "https://github.com/JustinYKC/FEPOPS", + "rel": "/software/repository/github/JustinYKC/FEPOPS", + "avatar": "https://avatars.githubusercontent.com/u/50987508?v=4", + "description": "Python implementation of the FEPOPS molecular descriptors", "topics": [] }, { - "uid": "github/NLESC-JCER/QMCTorch", - "url": "https://github.com/NLESC-JCER/QMCTorch", - "rel": "/software/repository/github/NLESC-JCER/QMCTorch", - "avatar": "https://avatars.githubusercontent.com/u/44467875?v=4", - "description": "Pytorch Implementation of Real Space Quantum Monte Carlo Simulations of Molecular Systems", + "uid": "github/optimusmoose/jsms", + "url": "https://github.com/optimusmoose/jsms", + "rel": "/software/repository/github/optimusmoose/jsms", + "avatar": "https://avatars2.githubusercontent.com/u/1541778?v=4", + "description": "A modular JavaScript viewer for mass spectrometry data", "topics": [] }, { - "uid": "github/NLESC-JCER/EigenCuda", - "url": "https://github.com/NLESC-JCER/EigenCuda", - "rel": "/software/repository/github/NLESC-JCER/EigenCuda", - "avatar": "https://avatars3.githubusercontent.com/u/44467875?v=4", - "description": "Offload Eigen operations to GPUs", + "uid": "github/madupite/madupite", + "url": "https://github.com/madupite/madupite", + "rel": "/software/repository/github/madupite/madupite", + "avatar": "https://avatars.githubusercontent.com/u/179175157?v=4", + "description": "a High-Performance Distributed Solver for Large-Scale Markov Decision Processes (MDP) relying on Inexact Policy Iteration; for Python and C++", "topics": [ - "eigen3", - "gpu-computing", - "cpp14", - "matrix-multiplication" + "dynamic-programming", + "high-performance-computing", + "markov-decision-processes", + "mdp", + "mpi", + "nanobind", + "optimal-control", + "petsc", + "stochastic-optimization", + "ethz", + "policy-iteration", + "optimization", + "solver", + "stochastic-optimal-control", + "cpp", + "python", + "python3", + "mdpsolver" ] }, { - "uid": "github/NLESC-JCER/Fortran_Davidson", - "url": "https://github.com/NLESC-JCER/Fortran_Davidson", - "rel": "/software/repository/github/NLESC-JCER/Fortran_Davidson", - "avatar": "https://avatars3.githubusercontent.com/u/44467875?v=4", - "description": "Davidson eigensolver implemented in Fortran", - "topics": [ - "eigenvalues", - "linear-algebra", - "davidson-eigensolver", - "modern-fortran", - "research-and-development" - ] + "uid": "github/kitokamada/QUIDS", + "url": "https://github.com/kitokamada/QUIDS", + "rel": "/software/repository/github/kitokamada/QUIDS", + "avatar": "https://avatars.githubusercontent.com/u/135876292?v=4", + "description": "Q/U Integrated Dust Shells", + "topics": [] }, { - "uid": "github/vijayvarma392/binaryBHexp", - "url": "https://github.com/vijayvarma392/binaryBHexp", - "rel": "/software/repository/github/vijayvarma392/binaryBHexp", - "avatar": "https://avatars.githubusercontent.com/u/9355891?v=4", - "description": "The binary Black Hole explorer (visualizations)", + "uid": "github/pytoolz/toolz", + "url": "https://github.com/pytoolz/toolz", + "rel": "/software/repository/github/pytoolz/toolz", + "avatar": "https://avatars.githubusercontent.com/u/5448828?v=4", + "description": "A functional standard library for Python.", "topics": [] }, { - "uid": "github/AsterLight0626/Twinkle", - "url": "https://github.com/AsterLight0626/Twinkle", - "rel": "/software/repository/github/AsterLight0626/Twinkle", - "avatar": "https://avatars.githubusercontent.com/u/102959521?v=4", - "description": "A GPU-based High-efficiency binary microlensing code", - "topics": [] + "uid": "github/BobAubouin/Python_Anesthesia_Simulator", + "url": "https://github.com/BobAubouin/Python_Anesthesia_Simulator", + "rel": "/software/repository/github/BobAubouin/Python_Anesthesia_Simulator", + "avatar": "https://avatars.githubusercontent.com/u/32908518?v=4", + "description": "Simulate the effect of drugs during total intrevenous anesthesia", + "topics": [ + "anesthesia", + "simulation", + "drug-dosage" + ] }, { - "uid": "github/IBMTRostock/GIFT", - "url": "https://github.com/IBMTRostock/GIFT", - "rel": "/software/repository/github/IBMTRostock/GIFT", - "avatar": "https://avatars.githubusercontent.com/u/93711119?v=4", - "description": "This work comes from the Institute for Biomedical Engineering (https://ibmt.med.uni-rostock.de/en/) at the University Medical Center Rostock", + "uid": "github/rhenkin/visxhclust", + "url": "https://github.com/rhenkin/visxhclust", + "rel": "/software/repository/github/rhenkin/visxhclust", + "avatar": "https://avatars.githubusercontent.com/u/1545093?v=4", + "description": "A Shiny app and functions for visual exploration of hierarchical clustering.", "topics": [] }, { - "uid": "github/GEUS-Glaciology-and-Climate/GrIML", - "url": "https://github.com/GEUS-Glaciology-and-Climate/GrIML", - "rel": "/software/repository/github/GEUS-Glaciology-and-Climate/GrIML", - "avatar": "https://avatars.githubusercontent.com/u/71171316?v=4", - "description": "Remote sensing classification of ice marginal lakes", + "uid": "github/optuna/optuna", + "url": "https://github.com/optuna/optuna", + "rel": "/software/repository/github/optuna/optuna", + "avatar": "https://avatars3.githubusercontent.com/u/57251745?v=4", + "description": "A hyperparameter optimization framework", "topics": [ - "esa", - "remote-sensing", - "glacial-lakes", - "satellite-imagery", - "glofs", - "ice-marginal-lakes", - "cryosphere" + "python", + "machine-learning", + "parallel", + "distributed", + "hyperparameter-optimization" ] }, { - "uid": "github/GEUS-Glaciology-and-Climate/pypromice", - "url": "https://github.com/GEUS-Glaciology-and-Climate/pypromice", - "rel": "/software/repository/github/GEUS-Glaciology-and-Climate/pypromice", - "avatar": "https://avatars.githubusercontent.com/u/71171316?v=4", - "description": "Process AWS data from L0 (raw logger) through Lx (end user)", + "uid": "github/egonw/bacting", + "url": "https://github.com/egonw/bacting", + "rel": "/software/repository/github/egonw/bacting", + "avatar": "https://avatars.githubusercontent.com/u/26721?v=4", + "description": "Bacting := acting as the Bioclipse TNG", "topics": [ - "greenland", - "weather", - "weather-station" + "cheminformatics", + "bioinformatics", + "rdf", + "bioclipse", + "excel", + "blueobelisk" ] }, { - "uid": "github/RETURN-project/BenchmarkRecovery", - "url": "https://github.com/RETURN-project/BenchmarkRecovery", - "rel": "/software/repository/github/RETURN-project/BenchmarkRecovery", - "avatar": "https://avatars.githubusercontent.com/u/54841522?v=4", - "description": "Benchmarking recovery indicators from remote sensing time series", + "uid": "github/ziotom78/libpolycomp", + "url": "https://github.com/ziotom78/libpolycomp", + "rel": "/software/repository/github/ziotom78/libpolycomp", + "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", + "description": "A compression library for one-dimensional numerical datastreams", "topics": [] }, { - "uid": "github/Ensembl/WiggleTools", - "url": "https://github.com/Ensembl/WiggleTools", - "rel": "/software/repository/github/Ensembl/WiggleTools", - "avatar": "https://avatars.githubusercontent.com/u/5832463?v=4", - "description": "Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency", + "uid": "github/ziotom78/dacapo_calibration", + "url": "https://github.com/ziotom78/dacapo_calibration", + "rel": "/software/repository/github/ziotom78/dacapo_calibration", + "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", + "description": "Calibrating TODs using the Da Capo algorithm", "topics": [] }, { - "uid": "github/Ensembl/ensembl-vep", - "url": "https://github.com/Ensembl/ensembl-vep", - "rel": "/software/repository/github/Ensembl/ensembl-vep", - "avatar": "https://avatars.githubusercontent.com/u/5832463?v=4", - "description": "The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants", + "uid": "github/ziotom78/Healpix.jl", + "url": "https://github.com/ziotom78/Healpix.jl", + "rel": "/software/repository/github/ziotom78/Healpix.jl", + "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", + "description": "Healpix library written in Julia", "topics": [] }, { - "uid": "github/tylertrimble/viswaternet", - "url": "https://github.com/tylertrimble/viswaternet", - "rel": "/software/repository/github/tylertrimble/viswaternet", - "avatar": "https://avatars.githubusercontent.com/u/102005076?v=4", - "description": "A Python package for easy generation and customization of water distribution network visualizations.", + "uid": "github/eelregit/covdisc", + "url": "https://github.com/eelregit/covdisc", + "rel": "/software/repository/github/eelregit/covdisc", + "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", + "description": "Disconnected covariance of 2-point functions in large-scale structure of the Universe", "topics": [] }, { - "uid": "github/tomalf2/recombinhunt-cov", - "url": "https://github.com/tomalf2/recombinhunt-cov", - "rel": "/software/repository/github/tomalf2/recombinhunt-cov", - "avatar": "https://avatars.githubusercontent.com/u/16090037?v=4", - "description": "RecombinHunt (alias for the software contained in this repository) is a Python library implementing a data-driven novel method for identifying contributing lineages and breakpoints in recombinant viral sequences.", + "uid": "github/eelregit/mcfit", + "url": "https://github.com/eelregit/mcfit", + "rel": "/software/repository/github/eelregit/mcfit", + "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", + "description": "multiplicatively convolutional fast integral transforms", "topics": [ - "big-data", - "bioinformatics", - "data-science", - "recombination", - "research", - "viral-genomics" + "fftlog", + "integral-transform", + "numerical-integration", + "cosmology" ] }, { - "uid": "github/floodlight-sports/floodlight", - "url": "https://github.com/floodlight-sports/floodlight", - "rel": "/software/repository/github/floodlight-sports/floodlight", - "avatar": "https://avatars.githubusercontent.com/u/92793483?v=4", - "description": "Python package for streamlined analysis of sports data.", + "uid": "github/eelregit/pmwd", + "url": "https://github.com/eelregit/pmwd", + "rel": "/software/repository/github/eelregit/pmwd", + "avatar": "https://avatars.githubusercontent.com/u/7311098?v=4", + "description": "Differentiable Cosmological Forward Model", "topics": [ - "python", - "sports-analytics", - "sports-stats" + "cosmology", + "forward-model", + "simulation", + "differentiable", + "jax", + "n-body", + "nbody-simulation" ] }, { - "uid": "github/izsvenezie-virology/genin2", - "url": "https://github.com/izsvenezie-virology/genin2", - "rel": "/software/repository/github/izsvenezie-virology/genin2", - "avatar": "https://avatars.githubusercontent.com/u/172770299?v=4", - "description": "Genin2 is a lightining-fast bioinformatic tool to predict genotypes for H5 viruses belonging to the European clade 2.3.4.4b", - "topics": [ - "avian-influenza", - "genotype-identification" - ] + "uid": "github/pfaucon/PBSIM-PacBio-Simulator", + "url": "https://github.com/pfaucon/PBSIM-PacBio-Simulator", + "rel": "/software/repository/github/pfaucon/PBSIM-PacBio-Simulator", + "avatar": "https://avatars.githubusercontent.com/u/3473919?v=4", + "description": "This is an updated mirror of the original PacBio Read Simulator", + "topics": [] }, { - "uid": "github/izsvenezie-virology/FluMut", - "url": "https://github.com/izsvenezie-virology/FluMut", - "rel": "/software/repository/github/izsvenezie-virology/FluMut", - "avatar": "https://avatars.githubusercontent.com/u/172770299?v=4", - "description": "FluMut is a command-line tool to find markers of interest in H5N1 avian influenza viruses.", + "uid": "github/JulienPeloton/lenscov", + "url": "https://github.com/JulienPeloton/lenscov", + "rel": "/software/repository/github/JulienPeloton/lenscov", + "avatar": "https://avatars.githubusercontent.com/u/20426972?v=4", + "description": "Full CMB and lensing covariances", "topics": [ - "avian-influenza", - "virology", - "flumut", - "izsve", - "izsvenezie", - "zoonotic-markers" + "lensing", + "cmb", + "covariance" ] }, { - "uid": "github/umbralcalc/nfield", - "url": "https://github.com/umbralcalc/nfield", - "rel": "/software/repository/github/umbralcalc/nfield", - "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", - "description": "Code for generally computing IR correlators during inflation with n-field dimensions - makes use of the formalism of Stochastic Inflation and hence 'mlsolver'", - "topics": [] + "uid": "github/JulienPeloton/s4cmb", + "url": "https://github.com/JulienPeloton/s4cmb", + "rel": "/software/repository/github/JulienPeloton/s4cmb", + "avatar": "https://avatars.githubusercontent.com/u/20426972?v=4", + "description": "Simulation of instrumental systematic effects in the context of CMB observations", + "topics": [ + "instrument", + "cmb", + "systematics", + "simulation" + ] }, { - "uid": "github/umbralcalc/foxi", - "url": "https://github.com/umbralcalc/foxi", - "rel": "/software/repository/github/umbralcalc/foxi", - "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", - "description": "Futuristic Observations and their eXpected Information: package for automated computation of a suite of information-theoretic and Bayesian expected utilities for deciding between scientific experimental designs ", + "uid": "github/mraveri/tensiometer", + "url": "https://github.com/mraveri/tensiometer", + "rel": "/software/repository/github/mraveri/tensiometer", + "avatar": "https://avatars.githubusercontent.com/u/8779332?v=4", + "description": null, "topics": [] }, { - "uid": "github/umbralcalc/helmpy", - "url": "https://github.com/umbralcalc/helmpy", - "rel": "/software/repository/github/umbralcalc/helmpy", - "avatar": "https://avatars.githubusercontent.com/u/12143658?v=4", - "description": "An all-in-one python class for optimised stochastic simulation and forecasting the effect of mass drug administration on helminth (parasitic worm) disease transmission", + "uid": "github/mggg/ecological-inference", + "url": "https://github.com/mggg/ecological-inference", + "rel": "/software/repository/github/mggg/ecological-inference", + "avatar": "https://avatars.githubusercontent.com/u/42822281?v=4", + "description": null, "topics": [] }, { - "uid": "github/svi-opensource/libics", - "url": "https://github.com/svi-opensource/libics", - "rel": "/software/repository/github/svi-opensource/libics", - "avatar": "https://avatars.githubusercontent.com/u/22935556?v=4", - "description": "Image Cytometry Standard file reading and writing.", + "uid": "github/mggg/votekit", + "url": "https://github.com/mggg/VoteKit", + "rel": "/software/repository/github/mggg/votekit", + "avatar": "https://avatars.githubusercontent.com/u/42822281?v=4", + "description": "A Swiss Army Knife for computational social choice research", "topics": [] }, { - "uid": "github/quantling/pyndl", - "url": "https://github.com/quantling/pyndl", - "rel": "/software/repository/github/quantling/pyndl", - "avatar": "https://avatars.githubusercontent.com/u/26636658?v=4", - "description": "pyndl implements a Naive discriminative learning which is a learning and classification models based on the Rescorla-Wagner equations in python3.", + "uid": "github/mlegr/EqualISER", + "url": "https://github.com/mlegr/EqualISER", + "rel": "/software/repository/github/mlegr/EqualISER", + "avatar": "https://avatars.githubusercontent.com/u/92648586?v=4", + "description": null, "topics": [] }, { - "uid": "github/dipto4/falcon_dm", - "url": "https://github.com/dipto4/falcon_dm", - "rel": "/software/repository/github/dipto4/falcon_dm", - "avatar": "https://avatars.githubusercontent.com/u/8073870?v=4", - "description": "Codebase for Falcon-DM: N-body code specifically tuned for simulating intermediate mass ratio inspirals in DM spikes. ", - "topics": [] + "uid": "github/damar-wicaksono/uqtestfuns", + "url": "https://github.com/damar-wicaksono/uqtestfuns", + "rel": "/software/repository/github/damar-wicaksono/uqtestfuns", + "avatar": "https://avatars.githubusercontent.com/u/5500067?v=4", + "description": "A Python3 library of test functions from the uncertainty quantification community with a common interface for validation and benchmarking purposes.", + "topics": [ + "python", + "uncertainty-quantification", + "metamodeling", + "sensitivity-analysis", + "test-functions", + "reliability-analysis" + ] }, { - "uid": "github/arnauqb/Qwind.jl", - "url": "https://github.com/arnauqb/Qwind.jl", - "rel": "/software/repository/github/arnauqb/Qwind.jl", - "avatar": "https://avatars.githubusercontent.com/u/21260922?v=4", - "description": "Computation of UV line-driven winds in AGNs", + "uid": "github/johnpaulett/python-hl7", + "url": "https://github.com/johnpaulett/python-hl7", + "rel": "/software/repository/github/johnpaulett/python-hl7", + "avatar": "https://avatars.githubusercontent.com/u/30702?v=4", + "description": "A simple library for parsing messages of Health Level 7 (HL7) version 2.x into Python objects.", "topics": [] }, { - "uid": "github/arnauqb/qwind", - "url": "https://github.com/arnauqb/qwind", - "rel": "/software/repository/github/arnauqb/qwind", - "avatar": "https://avatars.githubusercontent.com/u/21260922?v=4", - "description": "A non-hydrodynamical model for AGN line-drive winds.", - "topics": [] + "uid": "github/BonsonW/slow5curl", + "url": "https://github.com/BonsonW/slow5curl", + "rel": "/software/repository/github/BonsonW/slow5curl", + "avatar": "https://avatars.githubusercontent.com/u/57890355?v=4", + "description": "A library and tool for accessing remote BLOW5 files.", + "topics": [ + "api", + "c", + "fetching-data-from-server", + "library", + "slow5", + "tool", + "blow5", + "command-line-tool", + "curl" + ] }, { - "uid": "github/davidsoergel/rtax", - "url": "https://github.com/davidsoergel/rtax", - "rel": "/software/repository/github/davidsoergel/rtax", - "avatar": "https://avatars.githubusercontent.com/u/1347381?v=4", - "description": "Rapid and accurate taxonomic classification of short paired-end sequence reads from the 16S ribosomal RNA gene.", + "uid": "github/ejsafron/SATCHEL", + "url": "https://github.com/ejsafron/SATCHEL", + "rel": "/software/repository/github/ejsafron/SATCHEL", + "avatar": "https://avatars.githubusercontent.com/u/36644265?v=4", + "description": "Pipeline to search for long-period exoplanet signals in Kepler time-series data classified on the Planet Hunters website.", "topics": [] }, { - "uid": "github/lu-yizhou/ClusterSeg", - "url": "https://github.com/lu-yizhou/ClusterSeg", - "rel": "/software/repository/github/lu-yizhou/ClusterSeg", - "avatar": "https://avatars.githubusercontent.com/u/51467771?v=4", - "description": null, - "topics": [] + "uid": "github/guillochon/MOSFiT", + "url": "https://github.com/guillochon/MOSFiT", + "rel": "/software/repository/github/guillochon/MOSFiT", + "avatar": "https://avatars.githubusercontent.com/u/4998058?v=4", + "description": "Modular Open Source Fitter for Transients", + "topics": [ + "astronomy", + "python", + "supernovae", + "transients" + ] }, { - "uid": "github/wetransform-os/ProMCDA", - "url": "https://github.com/wetransform-os/ProMCDA", - "rel": "/software/repository/github/wetransform-os/ProMCDA", - "avatar": "https://avatars.githubusercontent.com/u/19746183?v=4", - "description": "A tool to estimate ranks of alternatives and their uncertainties based on the Multi Criteria Decision Analysis approach.", - "topics": [] + "uid": "github/pierrebarbera/epa-ng", + "url": "https://github.com/pierrebarbera/epa-ng", + "rel": "/software/repository/github/pierrebarbera/epa-ng", + "avatar": "https://avatars.githubusercontent.com/u/6584572?v=4", + "description": "Massively parallel phylogenetic placement of genetic sequences", + "topics": [ + "phylogenetics", + "bioinformatics", + "taxonomic-classification", + "mpi", + "openmp", + "mpi-io", + "placement" + ] }, { - "uid": "github/BapMel/mesocalc", - "url": "https://github.com/BapMel/mesocalc", - "rel": "/software/repository/github/BapMel/mesocalc", - "avatar": "https://avatars.githubusercontent.com/u/9018123?v=4", - "description": "MesoCalc is a Mesopotamian calculator.", + "uid": "github/ArtRand/signalAlign", + "url": "https://github.com/ArtRand/signalAlign", + "rel": "/software/repository/github/ArtRand/signalAlign", + "avatar": "https://avatars.githubusercontent.com/u/8851152?v=4", + "description": "HMM-HDP models for MinION signal alignments", "topics": [] }, { - "uid": "github/Jieyu126/Jitter", - "url": "https://github.com/Jieyu126/Jitter", - "rel": "/software/repository/github/Jieyu126/Jitter", - "avatar": "https://avatars.githubusercontent.com/u/16110010?v=4", - "description": null, + "uid": "github/ntoles/tristan-mp-pitp", + "url": "https://github.com/ntoles/tristan-mp-pitp", + "rel": "/software/repository/github/ntoles/tristan-mp-pitp", + "avatar": "https://avatars.githubusercontent.com/u/2400148?v=4", + "description": "Particle-in-cell code TRISTAN-MP", "topics": [] }, { - "uid": "github/idem-lab/conmat", - "url": "https://github.com/idem-lab/conmat", - "rel": "/software/repository/github/idem-lab/conmat", - "avatar": "https://avatars.githubusercontent.com/u/146308556?v=4", - "description": "Create Contact Matrices from Population Data", + "uid": "github/ECP-copa/Cabana", + "url": "https://github.com/ECP-copa/Cabana", + "rel": "/software/repository/github/ECP-copa/Cabana", + "avatar": "https://avatars.githubusercontent.com/u/24921631?v=4", + "description": "Performance-portable library for particle-based simulations", "topics": [ - "contact-matrices", - "population-data", - "r", - "public-health", - "infectious-diseases" + "particles", + "exascale-computing", + "exascale", + "kokkos", + "co-design" ] }, { - "uid": "github/joannegger/plaNETic", - "url": "https://github.com/joannegger/plaNETic", - "rel": "/software/repository/github/joannegger/plaNETic", - "avatar": "https://avatars.githubusercontent.com/u/103075328?v=4", - "description": "A neural network-based Bayesian internal structure modelling framework for small exoplanets", - "topics": [] - }, - { - "uid": "github/lifs-tools/goslin", - "url": "https://github.com/lifs-tools/goslin", - "rel": "/software/repository/github/lifs-tools/goslin", - "avatar": "https://avatars.githubusercontent.com/u/43466647?v=4", - "description": "Goslin is the Grammar on succinct lipid nomenclature.", + "uid": "github/CLARIAH/grlc", + "url": "https://github.com/CLARIAH/grlc", + "rel": "/software/repository/github/CLARIAH/grlc", + "avatar": "https://avatars0.githubusercontent.com/u/15210767?v=4", + "description": "grlc builds Web APIs using shared SPARQL queries", "topics": [ - "parsing", - "nomenclature", - "grammar", - "metabolomics", - "mass-spectrometry", - "lipid", - "lipidomics" + "swagger-ui", + "sparql", + "linked-data", + "semantic-web", + "api", + "linked-data-api", + "open-api" ] }, { - "uid": "github/lifs-tools/jmzTab-m", - "url": "https://github.com/lifs-tools/jmzTab-m", - "rel": "/software/repository/github/lifs-tools/jmzTab-m", - "avatar": "https://avatars1.githubusercontent.com/u/43466647?v=4", - "description": "Reference implementation for mzTab-M 2.0 for metabolomics", + "uid": "github/AgatheSenellart/MultiVae", + "url": "https://github.com/AgatheSenellart/MultiVae", + "rel": "/software/repository/github/AgatheSenellart/MultiVae", + "avatar": "https://avatars.githubusercontent.com/u/60698682?v=4", + "description": "Unifying Multimodal Variational Autoencoders (VAEs) in Pytorch", "topics": [] }, { - "uid": "github/ClusterMonteCarlo/CMC-COSMIC", - "url": "https://github.com/ClusterMonteCarlo/CMC-COSMIC", - "rel": "/software/repository/github/ClusterMonteCarlo/CMC-COSMIC", - "avatar": "https://avatars.githubusercontent.com/u/23002054?v=4", - "description": null, + "uid": "github/kingyin3613/RingsPy", + "url": "https://github.com/kingyin3613/ringspy", + "rel": "/software/repository/github/kingyin3613/RingsPy", + "avatar": "https://avatars.githubusercontent.com/u/17798082?v=4", + "description": "A Python automated geometric generation tool that generates 3D meshes of prismatic cellular solids with radial growth rules based on Voronoi diagrams.", "topics": [] }, { - "uid": "github/DrexelLenser/Lenser", - "url": "https://github.com/DrexelLenser/Lenser", - "rel": "/software/repository/github/DrexelLenser/Lenser", - "avatar": "https://avatars.githubusercontent.com/u/65193950?v=4", - "description": "A tool for measuring weak gravitational flexion", - "topics": [] + "uid": "github/MolMeDB/MolMeDB", + "url": "https://github.com/MolMeDB/MolMeDB", + "rel": "/software/repository/github/MolMeDB/MolMeDB", + "avatar": "https://avatars3.githubusercontent.com/u/62621831?v=4", + "description": "MolMeDB is an open chemistry database about interactions of molecules with membranes.", + "topics": [ + "chemistry", + "lipids", + "membranes", + "cheminformatics", + "database", + "small-molecule", + "permeability" + ] }, { - "uid": "github/ejikeugba/serp", - "url": "https://github.com/ejikeugba/serp", - "rel": "/software/repository/github/ejikeugba/serp", - "avatar": "https://avatars.githubusercontent.com/u/32841384?v=4", - "description": "Smooth Effects on Response Penalty for CLM", + "uid": "github/wangjun1996/VisFeature", + "url": "https://github.com/wangjun1996/VisFeature", + "rel": "/software/repository/github/wangjun1996/VisFeature", + "avatar": "https://avatars0.githubusercontent.com/u/43462056?v=4", + "description": "A stand-alone program for visualizing and analyzing statistical features of biological sequences", "topics": [] }, { - "uid": "github/ejikeugba/gofcat", - "url": "https://github.com/ejikeugba/gofcat", - "rel": "/software/repository/github/ejikeugba/gofcat", - "avatar": "https://avatars.githubusercontent.com/u/32841384?v=4", - "description": "Goodness-of-fit tests for categorical response models", + "uid": "github/cjtu/craterpy", + "url": "https://github.com/cjtu/craterpy", + "rel": "/software/repository/github/cjtu/craterpy", + "avatar": "https://avatars.githubusercontent.com/u/10285279?v=4", + "description": "A python library for impact crater data science", "topics": [ - "hosmer-lemeshow-test", - "lipsitz-test", - "pulkstenis-robinson-test", - "brant-test", - "likelihood-ratio-test", - "proportional-odds-test", - "pseudo-r2", - "brier-scores", - "log-loss-score-metric", - "misclassification", - "logistic-regression", - "ordinal-regression" + "planetary", + "data-science", + "python", + "open-science" ] }, { - "uid": "github/project-lighter/lighter", - "url": "https://github.com/project-lighter/lighter", - "rel": "/software/repository/github/project-lighter/lighter", - "avatar": "https://avatars.githubusercontent.com/u/122651785?v=4", - "description": "Streamline deep learning experiments using config files", + "uid": "github/rformassspectrometry/SpectriPy", + "url": "https://github.com/rformassspectrometry/SpectriPy", + "rel": "/software/repository/github/rformassspectrometry/SpectriPy", + "avatar": "https://avatars.githubusercontent.com/u/51361942?v=4", + "description": "Interfacing R's Spectra package with the Python world.", "topics": [ - "classification", - "config", - "monai", - "object-detection", - "pytorch", - "pytorch-lightning", - "segmentation", - "self-supervised-learning", - "hydra", - "yaml", - "deep-learning" + "mass-spectrometry", + "infrastructure", + "rstats", + "python" ] }, { - "uid": "github/unfoldtoolbox/UnfoldSim.jl", - "url": "https://github.com/unfoldtoolbox/UnfoldSim.jl", - "rel": "/software/repository/github/unfoldtoolbox/UnfoldSim.jl", - "avatar": "https://avatars.githubusercontent.com/u/35995464?v=4", - "description": "Simulate EEG / ERP data with overlap, non-linear effects, multiple regression", - "topics": [ - "eeg", - "erp", - "julia", - "simulation", - "time-series" - ] + "uid": "github/ulebreui/shark", + "url": "https://github.com/ulebreui/shark", + "rel": "/software/repository/github/ulebreui/shark", + "avatar": "https://avatars.githubusercontent.com/u/74534531?v=4", + "description": "This is the public repository of the shark code (Lebreuilly et al., 2023)", + "topics": [] }, { - "uid": "github/takfung/ResDisMapper", - "url": "https://github.com/takfung/ResDisMapper", - "rel": "/software/repository/github/takfung/ResDisMapper", - "avatar": "https://avatars2.githubusercontent.com/u/40194137?v=4", - "description": null, + "uid": "github/mihanke/athos", + "url": "https://github.com/mihanke/athos", + "rel": "/software/repository/github/mihanke/athos", + "avatar": "https://avatars.githubusercontent.com/u/42927573?v=4", + "description": "ATHOS: On-the-fly stellar parameter determination of FGK stars based on flux ratios from optical spectra", "topics": [] }, { - "uid": "github/Tomcxf/FASTdRNA", - "url": "https://github.com/Tomcxf/FASTdRNA", - "rel": "/software/repository/github/Tomcxf/FASTdRNA", - "avatar": "https://avatars.githubusercontent.com/u/75790226?v=4", - "description": "FASTdRNA is a workflow for analysis of ONT direct RNA seq dataset", + "uid": "github/bxia888/CEFCIG", + "url": "https://github.com/bxia888/CEFCIG", + "rel": "/software/repository/github/bxia888/CEFCIG", + "avatar": "https://avatars.githubusercontent.com/u/43397735?v=4", + "description": "CEFCIG (Computational Epigenetic Framework for Cell Identity Gene Discovery)", "topics": [] }, { - "uid": "github/dondi/GRNsight", - "url": "https://github.com/dondi/GRNsight", - "rel": "/software/repository/github/dondi/GRNsight", - "avatar": "https://avatars.githubusercontent.com/u/382242?v=4", - "description": "Web app and service for modeling and visualizing gene regulatory networks.", + "uid": "github/mrtommyb/ktransit", + "url": "https://github.com/mrtommyb/ktransit", + "rel": "/software/repository/github/mrtommyb/ktransit", + "avatar": "https://avatars.githubusercontent.com/u/1900573?v=4", + "description": "A simple exoplanet transit modeling tool in python", "topics": [] }, { - "uid": "github/deepmodeling/DMFF", - "url": "https://github.com/deepmodeling/DMFF", - "rel": "/software/repository/github/deepmodeling/DMFF", - "avatar": "https://avatars.githubusercontent.com/u/32671488?v=4", - "description": "DMFF (Differentiable Molecular Force Field) is a Jax-based python package that provides a full differentiable implementation of molecular force field models. ", + "uid": "github/remi-adam/minot", + "url": "https://github.com/remi-adam/minot", + "rel": "/software/repository/github/remi-adam/minot", + "avatar": "https://avatars.githubusercontent.com/u/49564579?v=4", + "description": "minot: Modeling of the ICM (Non-)thermal content and Observables prediction Tools", "topics": [] }, { - "uid": "github/HLasse/TextDescriptives", - "url": "https://github.com/HLasse/TextDescriptives", - "rel": "/software/repository/github/HLasse/TextDescriptives", - "avatar": "https://avatars.githubusercontent.com/u/23191638?v=4", - "description": "A Python library for calculating a large variety of metrics from text", + "uid": "github/SISPO-developers/sispo", + "url": "https://github.com/SISPO-developers/sispo", + "rel": "/software/repository/github/SISPO-developers/sispo", + "avatar": "https://avatars.githubusercontent.com/u/64485559?v=4", + "description": "Space Imaging Simulator for Proximity Operations (SISPO)", + "topics": [] + }, + { + "uid": "github/rkkuang/triplelens", + "url": "https://github.com/rkkuang/triplelens", + "rel": "/software/repository/github/rkkuang/triplelens", + "avatar": "https://avatars.githubusercontent.com/u/40119865?v=4", + "description": "Calculating light curves for triple microlensing systems", + "topics": [] + }, + { + "uid": "github/deepsphere/deepsphere-cosmo-tf1", + "url": "https://github.com/deepsphere/deepsphere-cosmo-tf1", + "rel": "/software/repository/github/deepsphere/deepsphere-cosmo-tf1", + "avatar": "https://avatars.githubusercontent.com/u/39727223?v=4", + "description": "A spherical convolutional neural network for cosmology (TFv1).", "topics": [ - "nlp", - "python", - "statistics", - "syntactic-analysis", - "readability", - "readability-scores", - "descriptive-statistics", - "spacy", - "spacy-extension", - "dependency-distance" + "graph-neural-networks", + "deep-learning", + "cosmology", + "spherical-harmonics", + "sphere", + "tensorflow", + "deepsphere" ] }, { - "uid": "github/gourabghoshroy/MPVNN", - "url": "https://github.com/gourabghoshroy/MPVNN", - "rel": "/software/repository/github/gourabghoshroy/MPVNN", - "avatar": "https://avatars.githubusercontent.com/u/10203845?v=4", - "description": "MUTATED PATHWAY VISIBLE NEURAL NETWORK FOR CANCER SPECIFIC SURVIVAL RISK PREDICTION", + "uid": "github/austinpeel/herculens", + "url": "https://github.com/austinpeel/herculens", + "rel": "/software/repository/github/austinpeel/herculens", + "avatar": "https://avatars.githubusercontent.com/u/17024310?v=4", + "description": "Auto-differentiable strong lens modelling with JAX", "topics": [] }, { - "uid": "github/rossjturner/RAiSERed", - "url": "https://github.com/rossjturner/RAiSERed", - "rel": "/software/repository/github/rossjturner/RAiSERed", - "avatar": "https://avatars.githubusercontent.com/u/51308689?v=4", - "description": null, + "uid": "github/bcbio/bcbio-nextgen", + "url": "https://github.com/bcbio/bcbio-nextgen", + "rel": "/software/repository/github/bcbio/bcbio-nextgen", + "avatar": "https://avatars.githubusercontent.com/u/14271794?v=4", + "description": "Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis", "topics": [] }, { - "uid": "github/yanrong-stacy-song/creditr", - "url": "https://github.com/yanrong-stacy-song/creditr", - "rel": "/software/repository/github/yanrong-stacy-song/creditr", - "avatar": "https://avatars.githubusercontent.com/u/48292717?v=4", - "description": null, + "uid": "github/bcbio/bcbio.variation.recall", + "url": "https://github.com/bcbio/bcbio.variation.recall", + "rel": "/software/repository/github/bcbio/bcbio.variation.recall", + "avatar": "https://avatars.githubusercontent.com/u/14271794?v=4", + "description": "Parallel merging, squaring off and ensemble calling for genomic variants", "topics": [] }, { - "uid": "github/EMBL-Hentze-group/htseq-clip", - "url": "https://github.com/EMBL-Hentze-group/htseq-clip", - "rel": "/software/repository/github/EMBL-Hentze-group/htseq-clip", - "avatar": "https://avatars.githubusercontent.com/u/55585244?v=4", - "description": "a toolset designed for the processing and analysis of eCLIP/iCLIP dataset", + "uid": "github/jsh58/Genrich", + "url": "https://github.com/jsh58/Genrich", + "rel": "/software/repository/github/jsh58/Genrich", + "avatar": "https://avatars.githubusercontent.com/u/4921955?v=4", + "description": "Detecting sites of genomic enrichment", + "topics": [] + }, + { + "uid": "github/RandyRDavila/GraphCalc", + "url": "https://github.com/RandyRDavila/GraphCalc", + "rel": "/software/repository/github/RandyRDavila/GraphCalc", + "avatar": "https://avatars.githubusercontent.com/u/33989989?v=4", + "description": "A repository for computation of graph invariants", "topics": [ - "bioinformatics", - "ngs-analysis", - "eclip" + "graphs-theory", + "optimization" ] }, { - "uid": "github/yangyanli/DO-Conv", - "url": "https://github.com/yangyanli/DO-Conv", - "rel": "/software/repository/github/yangyanli/DO-Conv", - "avatar": "https://avatars.githubusercontent.com/u/2976460?v=4", - "description": "Depthwise Over-parameterized Convolutional Layer", + "uid": "github/rahil-makadia/grss", + "url": "https://github.com/rahil-makadia/grss", + "rel": "/software/repository/github/rahil-makadia/grss", + "avatar": "https://avatars.githubusercontent.com/u/40069449?v=4", + "description": "Gauss-Radau Small-body Simulator. Maintainer: @rahil-makadia", "topics": [ - "deep-learning", - "convolutional-neural-networks", - "tensorflow", - "pytorch", - "gluoncv" + "asteroids", + "astronomy", + "orbit-determination", + "comets", + "orbit-propagation" ] }, { - "uid": "github/Substra/substra", - "url": "https://github.com/Substra/substra", - "rel": "/software/repository/github/Substra/substra", - "avatar": "https://avatars.githubusercontent.com/u/84009910?v=4", - "description": "Low-level Python library used to interact with a Substra network", + "uid": "github/cdslaborg/paramonte", + "url": "https://github.com/cdslaborg/paramonte", + "rel": "/software/repository/github/cdslaborg/paramonte", + "avatar": "https://avatars.githubusercontent.com/u/45322013?v=4", + "description": "ParaMonte: Plain Powerful Parallel Monte Carlo and MCMC Library for Python, MATLAB, Fortran, C++, C.", "topics": [ - "federated-learning", - "federated-learning-framework" + "monte-carlo", + "parallel-library", + "markov-chain", + "adaptive-learning", + "bayesian-inference", + "bayesian-statistics", + "machine-learning", + "machine-learning-algorithms", + "machine-learning-library", + "sampling", + "intergration", + "c", + "cpp", + "fortran", + "python", + "matlab", + "paramonte-library", + "monte-carlo-simulations", + "mpi", + "mcmc" ] }, { - "uid": "github/rikenbit/iTensor", - "url": "https://github.com/rikenbit/iTensor", - "rel": "/software/repository/github/rikenbit/iTensor", - "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", - "description": "R package for ICA-based Matrix/Tensor Decomposition", - "topics": [] + "uid": "github/AMReX-Combustion/PeleLMeX", + "url": "https://github.com/AMReX-Combustion/PeleLMeX", + "rel": "/software/repository/github/AMReX-Combustion/PeleLMeX", + "avatar": "https://avatars.githubusercontent.com/u/28372265?v=4", + "description": "An adaptive mesh hydrodynamics simulation code for low Mach number reacting flows without level sub-cycling.", + "topics": [ + "amrex", + "combustion", + "low-mach-number", + "gpu-acceleration" + ] }, { - "uid": "github/rikenbit/OnlineNMF.jl", - "url": "https://github.com/rikenbit/OnlineNMF.jl", - "rel": "/software/repository/github/rikenbit/OnlineNMF.jl", - "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", - "description": "Online Non-negative Matrix Factorization", + "uid": "github/traja-team/traja", + "url": "https://github.com/traja-team/traja", + "rel": "/software/repository/github/traja-team/traja", + "avatar": "https://avatars.githubusercontent.com/u/60182006?v=4", + "description": "Python tools for spatial trajectory and time-series data analysis", "topics": [ - "bioinformatics", - "dimensionality-reduction", - "julia", - "nmf", - "out-of-core-processing", - "sparse-matrix" + "time-series-analysis", + "animal-behavior", + "trajectory-analysis", + "python", + "spatial-data-analysis" ] }, { - "uid": "github/rikenbit/nnTensor", - "url": "https://github.com/rikenbit/nnTensor", - "rel": "/software/repository/github/rikenbit/nnTensor", - "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", - "description": "R package for Non-negative Tensor Decomposition", + "uid": "github/PyDL/cat-puma", + "url": "https://github.com/PyDL/cat-puma", + "rel": "/software/repository/github/PyDL/cat-puma", + "avatar": "https://avatars.githubusercontent.com/u/7454038?v=4", + "description": "CME Arrival Time Prediction Using Machine learning Algorithms", "topics": [] }, { - "uid": "github/rikenbit/OnlinePCA.jl", - "url": "https://github.com/rikenbit/OnlinePCA.jl", - "rel": "/software/repository/github/rikenbit/OnlinePCA.jl", - "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", - "description": "Online Principal Component Analysis", - "topics": [ - "bioinformatics", - "dimensionality-reduction", - "julia", - "out-of-core-processing", - "pca", - "sparse-matrix" - ] + "uid": "github/dparkins/CosmoNest", + "url": "https://github.com/dparkins/CosmoNest", + "rel": "/software/repository/github/dparkins/CosmoNest", + "avatar": "https://avatars.githubusercontent.com/u/3622802?v=4", + "description": "Cosmological Nested Sampling (to be used with cosmomc)", + "topics": [] }, { - "uid": "github/rikenbit/dcTensor", - "url": "https://github.com/rikenbit/dcTensor", - "rel": "/software/repository/github/rikenbit/dcTensor", - "avatar": "https://avatars.githubusercontent.com/u/7158513?v=4", - "description": "R package for Discrete Matrix/Tensor Decomposition", + "uid": "github/sbird/fake_spectra", + "url": "https://github.com/sbird/fake_spectra", + "rel": "/software/repository/github/sbird/fake_spectra", + "avatar": "https://avatars.githubusercontent.com/u/1325948?v=4", + "description": "A code for generating fake spectra from a cosmological simulation", "topics": [] }, { - "uid": "github/shinichiroando/sashimi-w", - "url": "https://github.com/shinichiroando/sashimi-w", - "rel": "/software/repository/github/shinichiroando/sashimi-w", - "avatar": "https://avatars.githubusercontent.com/u/3914962?v=4", - "description": null, + "uid": "github/sbird/GenPK", + "url": "https://github.com/sbird/GenPK", + "rel": "/software/repository/github/sbird/GenPK", + "avatar": "https://avatars.githubusercontent.com/u/1325948?v=4", + "description": "Program for finding the matter power spectrum from Gadget format files. Uses FFTW3 and GadgetReader.", "topics": [] }, { - "uid": "github/shinichiroando/sashimi-c", - "url": "https://github.com/shinichiroando/sashimi-c", - "rel": "/software/repository/github/shinichiroando/sashimi-c", - "avatar": "https://avatars.githubusercontent.com/u/3914962?v=4", + "uid": "github/emrecdem/emo-spectre", + "url": "https://github.com/emrecdem/emo-spectre", + "rel": "/software/repository/github/emrecdem/emo-spectre", + "avatar": "https://avatars.githubusercontent.com/u/33319427?v=4", "description": null, "topics": [] }, { - "uid": "github/spglib/spgrep", - "url": "https://github.com/spglib/spgrep", - "rel": "/software/repository/github/spglib/spgrep", - "avatar": "https://avatars.githubusercontent.com/u/64672219?v=4", - "description": "On-the-fly generator of space-group irreducible representations", + "uid": "github/MikeSWang/Triumvirate", + "url": "https://github.com/MikeSWang/Triumvirate", + "rel": "/software/repository/github/MikeSWang/Triumvirate", + "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", + "description": "A Python/C++ package for three-point clustering measurements in LSS analyses", "topics": [ - "crystallography", - "group-theory", - "irreducible-representations", - "materials-science", "python", - "representation-theory" + "cpp", + "cosmology", + "cython" ] }, { - "uid": "github/EddyRivasLab/hmmer", - "url": "https://github.com/EddyRivasLab/hmmer", - "rel": "/software/repository/github/EddyRivasLab/hmmer", - "avatar": "https://avatars.githubusercontent.com/u/13962260?v=4", - "description": "HMMER: biological sequence analysis using profile HMMs", - "topics": [] + "uid": "github/MikeSWang/Harmonia", + "url": "https://github.com/MikeSWang/Harmonia", + "rel": "/software/repository/github/MikeSWang/Harmonia", + "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", + "description": "Hybrid-basis inference for large-scale galaxy clustering", + "topics": [ + "galaxy-clustering", + "cosmological-inference", + "large-scale-structure-cosmology" + ] }, { - "uid": "github/EddyRivasLab/infernal", - "url": "https://github.com/EddyRivasLab/infernal", - "rel": "/software/repository/github/EddyRivasLab/infernal", - "avatar": "https://avatars.githubusercontent.com/u/13962260?v=4", - "description": "RNA secondary structure/sequence profiles for homology search and alignment", + "uid": "github/MikeSWang/HorizonGRound", + "url": "https://github.com/MikeSWang/HorizonGRound", + "rel": "/software/repository/github/MikeSWang/HorizonGRound", + "avatar": "https://avatars.githubusercontent.com/u/32841762?v=4", + "description": "Relativistic effects in ultra-large-scale galaxy clustering", + "topics": [ + "large-scale-structure-cosmology", + "galaxy-clustering", + "cosmological-parameters", + "relativistic-effects" + ] + }, + { + "uid": "github/martinsparre/XSHPipelineManager", + "url": "https://github.com/martinsparre/XSHPipelineManager", + "rel": "/software/repository/github/martinsparre/XSHPipelineManager", + "avatar": "https://avatars.githubusercontent.com/u/1378739?v=4", + "description": "A script to run the X-shooter pipeline", "topics": [] }, { - "uid": "github/fxwiegand/predictosaurus", - "url": "https://github.com/fxwiegand/predictosaurus", - "rel": "/software/repository/github/fxwiegand/predictosaurus", - "avatar": "https://avatars.githubusercontent.com/u/39430842?v=4", - "description": "Uncertainty aware haplotype based genomic variant effect prediction", + "uid": "github/biboyd/SALSA", + "url": "https://github.com/biboyd/SALSA", + "rel": "/software/repository/github/biboyd/SALSA", + "avatar": "https://avatars0.githubusercontent.com/u/42776109?v=4", + "description": "Salsa is a Python package for constructing synthetic absorber catalogs from astrophysical hydrodynamic simulations", "topics": [] }, { - "uid": "github/grant-m-s/astronomicAL", - "url": "https://github.com/grant-m-s/AstronomicAL", - "rel": "/software/repository/github/grant-m-s/astronomicAL", - "avatar": "https://avatars.githubusercontent.com/u/12834844?v=4", - "description": "An interactive dashboard for visualisation, integration and classification of data using Active Learning.", + "uid": "github/barricklab/pLannotate", + "url": "https://github.com/barricklab/pLannotate", + "rel": "/software/repository/github/barricklab/pLannotate", + "avatar": "https://avatars.githubusercontent.com/u/11457754?v=4", + "description": "Webserver and command line tool for annotating engineered plasmids", "topics": [ - "machine-learning", - "active-learning", - "astronomy", - "interactive", - "labelling", - "python", - "data-visualization" + "plasmid-annotation", + "webserver" ] }, { - "uid": "github/hpc4cmb/toast", - "url": "https://github.com/hpc4cmb/toast", - "rel": "/software/repository/github/hpc4cmb/toast", - "avatar": "https://avatars.githubusercontent.com/u/19177696?v=4", - "description": "Time Ordered Astrophysics Scalable Tools", + "uid": "github/barricklab/seabreeze", + "url": "https://github.com/barricklab/seabreeze", + "rel": "/software/repository/github/barricklab/seabreeze", + "avatar": "https://avatars.githubusercontent.com/u/11457754?v=4", + "description": "seabreeze: A Pipeline for Analyzing Structural Variation Between Bacterial Genome Assemblies", + "topics": [ + "bioinformatics-pipeline", + "experimental-evolution", + "long-read-sequencing", + "structural-variation" + ] + }, + { + "uid": "github/JuliaSmoothOptimizers/DCISolver.jl", + "url": "https://github.com/JuliaSmoothOptimizers/DCISolver.jl", + "rel": "/software/repository/github/JuliaSmoothOptimizers/DCISolver.jl", + "avatar": "https://avatars.githubusercontent.com/u/15710294?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/JuliaSmoothOptimizers/PDENLPModels.jl", + "url": "https://github.com/JuliaSmoothOptimizers/PDENLPModels.jl", + "rel": "/software/repository/github/JuliaSmoothOptimizers/PDENLPModels.jl", + "avatar": "https://avatars.githubusercontent.com/u/15710294?v=4", + "description": "A NLPModel API for optimization problems with PDE-constraints", "topics": [] }, { - "uid": "github/research-software-directory/research-software-directory", - "url": "https://github.com/research-software-directory/research-software-directory", - "rel": "/software/repository/github/research-software-directory/research-software-directory", - "avatar": "https://avatars1.githubusercontent.com/u/35487281?v=4", - "description": "The Research Software Directory is a content management system that is tailored to software.", + "uid": "github/galaxyproject/ansible-tiaas2", + "url": "https://github.com/galaxyproject/ansible-tiaas2", + "rel": "/software/repository/github/galaxyproject/ansible-tiaas2", + "avatar": "https://avatars.githubusercontent.com/u/7937847?v=4", + "description": "Ansible role for deploying TIaaS2", + "topics": [] + }, + { + "uid": "github/galaxyproject/galaxy-lib", + "url": "https://github.com/galaxyproject/galaxy-lib", + "rel": "/software/repository/github/galaxyproject/galaxy-lib", + "avatar": "https://avatars.githubusercontent.com/u/7937847?v=4", + "description": "Subset of Galaxy (http://galaxyproject.org/) core code designed to be used as a library.", "topics": [ - "fair-for-software", - "reproducible-research", - "research-software-engineering", - "discoverability" + "usegalaxy", + "library", + "python" ] }, { - "uid": "github/sachsmc/cosinor", - "url": "https://github.com/sachsmc/cosinor", - "rel": "/software/repository/github/sachsmc/cosinor", - "avatar": "https://avatars2.githubusercontent.com/u/5464185?v=4", - "description": "R package for estimation and prediction of the cosinor model for periodic data", + "uid": "github/KCL-BMEIS/NiftySeg", + "url": "https://github.com/KCL-BMEIS/NiftySeg", + "rel": "/software/repository/github/KCL-BMEIS/NiftySeg", + "avatar": "https://avatars.githubusercontent.com/u/39486397?v=4", + "description": "contains programs to perform EM based segmentation of images in nifti or analyse format.", "topics": [] }, { - "uid": "github/SeaIce-Math/SubZero", - "url": "https://github.com/SeaIce-Math/SubZero", - "rel": "/software/repository/github/SeaIce-Math/SubZero", - "avatar": "https://avatars.githubusercontent.com/u/63267895?v=4", - "description": "Discrete element sea ice model", + "uid": "github/QCUncertainty/sigma", + "url": "https://github.com/QCUncertainty/sigma", + "rel": "/software/repository/github/QCUncertainty/sigma", + "avatar": "https://avatars.githubusercontent.com/u/168684162?v=4", + "description": "C++ Uncertainty Propagation", "topics": [] }, { - "uid": "github/CosmoLike/CosmoCov", - "url": "https://github.com/CosmoLike/CosmoCov", - "rel": "/software/repository/github/CosmoLike/CosmoCov", - "avatar": "https://avatars.githubusercontent.com/u/24500384?v=4", - "description": "Configuration Space Covariances for Projected Galaxy 2-Point Statistics", + "uid": "github/hamers/secularmultiple", + "url": "https://github.com/hamers/secularmultiple", + "rel": "/software/repository/github/hamers/secularmultiple", + "avatar": "https://avatars.githubusercontent.com/u/25057380?v=4", + "description": "Code to model the secular evolution of a hierarchical multiple system", "topics": [] }, { - "uid": "github/Dfupa/meTAline", - "url": "https://github.com/Dfupa/meTAline", - "rel": "/software/repository/github/Dfupa/meTAline", - "avatar": "https://avatars.githubusercontent.com/u/43205584?v=4", - "description": "WGS pipeline implementation in Snakemake", + "uid": "github/hamers/tpi", + "url": "https://github.com/hamers/tpi", + "rel": "/software/repository/github/hamers/tpi", + "avatar": "https://avatars.githubusercontent.com/u/25057380?v=4", + "description": "Test Particle Integrator: integrate test particles around a massive black hole", "topics": [] }, { - "uid": "github/jenniferlu717/Bracken", - "url": "https://github.com/jenniferlu717/Bracken", - "rel": "/software/repository/github/jenniferlu717/Bracken", - "avatar": "https://avatars.githubusercontent.com/u/3779419?v=4", - "description": "(Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.", - "topics": [] + "uid": "github/churchmanlab/genewalk", + "url": "https://github.com/churchmanlab/genewalk", + "rel": "/software/repository/github/churchmanlab/genewalk", + "avatar": "https://avatars.githubusercontent.com/u/1781555?v=4", + "description": "GeneWalk identifies relevant gene functions for a biological context using network representation learning", + "topics": [ + "functional-genomics", + "machine-learning-algorithm" + ] }, { - "uid": "github/SkywalkerLuke/TransHLA", - "url": "https://github.com/SkywalkerLuke/TransHLA", - "rel": "/software/repository/github/SkywalkerLuke/TransHLA", - "avatar": "https://avatars.githubusercontent.com/u/86698972?v=4", - "description": "TransHLA: A hybrid transformer model for peptide-HLA epitope detection.", + "uid": "github/KarrLab/de_sim", + "url": "https://github.com/KarrLab/de_sim", + "rel": "/software/repository/github/KarrLab/de_sim", + "avatar": "https://avatars3.githubusercontent.com/u/13785824?v=4", + "description": "Python-based object-oriented discrete-event simulation tool for complex, data-driven modeling", "topics": [ - "epitope", - "hla", - "transformers", - "llms" + "discrete-event-simulation", + "data-driven-model", + "computational-modelling", + "simulation", + "object-oriented-programming", + "python" ] }, { - "uid": "github/younglab/origami", - "url": "https://github.com/younglab/origami", - "rel": "/software/repository/github/younglab/origami", - "avatar": "https://avatars.githubusercontent.com/u/15201790?v=4", - "description": "Statistical Modeling of ChIA-PET interactions", + "uid": "github/LoganAMorrison/Hazma", + "url": "https://github.com/LoganAMorrison/Hazma", + "rel": "/software/repository/github/LoganAMorrison/Hazma", + "avatar": "https://avatars.githubusercontent.com/u/22247102?v=4", + "description": "Python package for computing indirect detection constraints on sub-GeV dark matter.", "topics": [ - "chia-pet", - "chromatin", - "chromatin-interaction" + "physics", + "quantum-field-theory", + "astrophysics", + "python" ] }, { - "uid": "github/cbml-forth/eucaim_wizard_tool", - "url": "https://github.com/cbml-forth/eucaim_wizard_tool", - "rel": "/software/repository/github/cbml-forth/eucaim_wizard_tool", - "avatar": "https://avatars.githubusercontent.com/u/24669067?v=4", - "description": "The EUCAIM Wizard tool is based on ARX software which is open-source data de-identification / anonymization software that supports various anonymization techniques. The freely available ARX software has been configured for the specific requirements of the EUCAIM platform taking into account the specific imaging and clinical data characteristics.", + "uid": "github/LoganAMorrison/blackthorn", + "url": "https://github.com/LoganAMorrison/blackthorn", + "rel": "/software/repository/github/LoganAMorrison/blackthorn", + "avatar": "https://avatars.githubusercontent.com/u/22247102?v=4", + "description": "Project for computing spectra from right-handed neutrino decays", "topics": [] }, { - "uid": "github/shenlab-sinai/ngsplot", - "url": "https://github.com/shenlab-sinai/ngsplot", - "rel": "/software/repository/github/shenlab-sinai/ngsplot", - "avatar": "https://avatars.githubusercontent.com/u/5775936?v=4", - "description": "Quick mining and visualization of NGS data by integrating genomic databases", + "uid": "github/steven-murray/powerbox", + "url": "https://github.com/steven-murray/powerbox", + "rel": "/software/repository/github/steven-murray/powerbox", + "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", + "description": "A python package for making arbitrarily structured, arbitrary-dimension boxes", "topics": [] }, { - "uid": "github/ngbusca/QuasarNET", - "url": "https://github.com/ngbusca/QuasarNET", - "rel": "/software/repository/github/ngbusca/QuasarNET", - "avatar": "https://avatars.githubusercontent.com/u/4727509?v=4", - "description": null, + "uid": "github/steven-murray/mrpy", + "url": "https://github.com/steven-murray/mrpy", + "rel": "/software/repository/github/steven-murray/mrpy", + "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", + "description": "A Python package for calculations with the MRP parameterisation of the Halo Mass Function.", "topics": [] }, { - "uid": "github/MetaCell/scicrunch-antibody-registry", - "url": "https://github.com/MetaCell/scicrunch-antibody-registry", - "rel": "/software/repository/github/MetaCell/scicrunch-antibody-registry", - "avatar": "https://avatars.githubusercontent.com/u/10982870?v=4", - "description": "A repo for the SciCrunch antibody registry portal ", + "uid": "github/steven-murray/pydftools", + "url": "https://github.com/steven-murray/pydftools", + "rel": "/software/repository/github/steven-murray/pydftools", + "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", + "description": "A pure-python port of the R dftools package", "topics": [] }, { - "uid": "github/ratschlab/metagraph", - "url": "https://github.com/ratschlab/metagraph", - "rel": "/software/repository/github/ratschlab/metagraph", - "avatar": "https://avatars.githubusercontent.com/u/1820852?v=4", - "description": "Scalable annotated de Bruijn graphs for DNA indexing, alignment, and assembly", - "topics": [ - "graph", - "dna", - "alignment", - "metagenomics", - "search", - "assembly" - ] + "uid": "github/rust-bio/rust-bio-tools", + "url": "https://github.com/rust-bio/rust-bio-tools", + "rel": "/software/repository/github/rust-bio/rust-bio-tools", + "avatar": "https://avatars.githubusercontent.com/u/13785584?v=4", + "description": "A set of command line utilities based on Rust-Bio.", + "topics": [] }, { - "uid": "github/xiaochuanle/MECAT2", - "url": "https://github.com/xiaochuanle/MECAT2", - "rel": "/software/repository/github/xiaochuanle/MECAT2", - "avatar": "https://avatars.githubusercontent.com/u/86280?v=4", - "description": "ultra-fast and accurate de novo assembly tools for SMRT reads", + "uid": "github/SCIInstitute/UncertainSCI", + "url": "https://github.com/SCIInstitute/UncertainSCI", + "rel": "/software/repository/github/SCIInstitute/UncertainSCI", + "avatar": "https://avatars.githubusercontent.com/u/1399384?v=4", + "description": null, "topics": [] }, { - "uid": "github/Music-and-Culture-Technology-Lab/omnizart", - "url": "https://github.com/Music-and-Culture-Technology-Lab/omnizart", - "rel": "/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", - "avatar": "https://avatars.githubusercontent.com/u/46015501?v=4", - "description": "Omniscient Mozart, being able to transcribe everything in the music, including vocal, drum, chord, beat, instruments, and more.", - "topics": [ - "music-transcription", - "drum-transcription", - "vocal", - "beat-tracking", - "chord", - "music-information-retrieval" - ] + "uid": "github/eas342/tshirt", + "url": "https://github.com/eas342/tshirt", + "rel": "/software/repository/github/eas342/tshirt", + "avatar": "https://avatars.githubusercontent.com/u/234377?v=4", + "description": "Tools for time series", + "topics": [] }, { - "uid": "github/brettc/partitionfinder", - "url": "https://github.com/brettc/partitionfinder", - "rel": "/software/repository/github/brettc/partitionfinder", - "avatar": "https://avatars.githubusercontent.com/u/457283?v=4", - "description": "PartitionFinder discovers optimal partitioning schemes for DNA sequences.", + "uid": "github/mzechmeister/serval", + "url": "https://github.com/mzechmeister/serval", + "rel": "/software/repository/github/mzechmeister/serval", + "avatar": "https://avatars.githubusercontent.com/u/32583239?v=4", + "description": "calculate radial velocities from stellar spectra", "topics": [] }, { - "uid": "github/inrae/RCaNmodel", - "url": "https://github.com/inrae/RCaNmodel", - "rel": "/software/repository/github/inrae/RCaNmodel", - "avatar": "https://avatars.githubusercontent.com/u/64418390?v=4", - "description": "repository for RCaN and RCaNconstructor", + "uid": "github/mzechmeister/viper", + "url": "https://github.com/mzechmeister/viper", + "rel": "/software/repository/github/mzechmeister/viper", + "avatar": "https://avatars.githubusercontent.com/u/32583239?v=4", + "description": null, "topics": [] }, { - "uid": "github/LTLA/basilisk", - "url": "https://github.com/LTLA/basilisk", - "rel": "/software/repository/github/LTLA/basilisk", - "avatar": "https://avatars.githubusercontent.com/u/8166669?v=4", - "description": "Clone of the Bioconductor repository for the basilisk package.", + "uid": "github/philbull/RadioFisher", + "url": "https://github.com/philbull/RadioFisher", + "rel": "/software/repository/github/philbull/RadioFisher", + "avatar": "https://avatars.githubusercontent.com/u/710867?v=4", + "description": "Fisher forecasting for 21cm intensity mapping and spectroscopic galaxy surveys", "topics": [] }, { - "uid": "github/LTLA/gesel.js", - "url": "https://github.com/LTLA/gesel.js", - "rel": "/software/repository/github/LTLA/gesel.js", - "avatar": "https://avatars.githubusercontent.com/u/8166669?v=4", - "description": "Client-side gene set queries.", + "uid": "github/brunettsp/myosothes", + "url": "https://github.com/brunettsp/myosothes", + "rel": "/software/repository/github/brunettsp/myosothes", + "avatar": "https://avatars.githubusercontent.com/u/107464966?v=4", + "description": "An automated Myofibers Segmentation wOrkflow Tuned for HE Staining", "topics": [] }, { - "uid": "github/soichiro-hattori/unpopular", - "url": "https://github.com/soichiro-hattori/unpopular", - "rel": "/software/repository/github/soichiro-hattori/unpopular", - "avatar": "https://avatars.githubusercontent.com/u/4204544?v=4", - "description": "An implementation of the Causal Pixel Model (CPM) for TESS data.", + "uid": "github/mwoodbri/MRIdb", + "url": "https://github.com/mwoodbri/MRIdb", + "rel": "/software/repository/github/mwoodbri/MRIdb", + "avatar": "https://avatars.githubusercontent.com/u/1724545?v=4", + "description": "An end-to-end data management system for MRI", "topics": [] }, { - "uid": "github/uw-ipd/RoseTTAFold2", - "url": "https://github.com/uw-ipd/RoseTTAFold2", - "rel": "/software/repository/github/uw-ipd/RoseTTAFold2", - "avatar": "https://avatars.githubusercontent.com/u/39229126?v=4", - "description": "RoseTTAFold2, extends the original three-track architecture of RoseTTAFold over the full network, incorporating the concepts of Frame-aligned point error, recycling during training, and the use of a distillation set from AlphaFold2.", + "uid": "github/WatsonLab/MAGpy", + "url": "https://github.com/WatsonLab/MAGpy", + "rel": "/software/repository/github/WatsonLab/MAGpy", + "avatar": "https://avatars.githubusercontent.com/u/29977047?v=4", + "description": "Snakemake pipeline for downstream analysis of metagenome-assembled genomes (MAGs) (pronounced mag-pie)", "topics": [] }, { - "uid": "github/ropensci-archive/monkeylearn", - "url": "https://github.com/ropensci-archive/monkeylearn", - "rel": "/software/repository/github/ropensci-archive/monkeylearn", - "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", - "description": ":no_entry: ARCHIVED :no_entry: :monkey: R package for text analysis with Monkeylearn :monkey:", - "topics": [ - "monkeylearn", - "nlp", - "nlp-machine-learning", - "extractor", - "classifier", - "r", - "rstats", - "r-package", - "peer-reviewed", - "classifier", - "extractor", - "monkeylearn", - "nlp", - "nlp-machine-learning", - "peer-reviewed", - "data-access" - ] + "uid": "github/jobovy/stream-stream", + "url": "https://github.com/jobovy/stream-stream", + "rel": "/software/repository/github/jobovy/stream-stream", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Investigation of the interaction between stellar and dark-matter streams", + "topics": [] }, { - "uid": "github/ropensci-archive/arresteddev", - "url": "https://github.com/ropensci-archive/arresteddev", - "rel": "/software/repository/github/ropensci-archive/arresteddev", - "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", - "description": "Arrested Development", - "topics": [ - "unconf17", - "r", - "r-package", - "rstats", - "unconf", - "unconf", - "unconf17" - ] + "uid": "github/jobovy/streamgap-pepper", + "url": "https://github.com/jobovy/streamgap-pepper", + "rel": "/software/repository/github/jobovy/streamgap-pepper", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Code exploring the effect of peppering of streams with many small impacts", + "topics": [] }, { - "uid": "github/ropensci-archive/rodev", - "url": "https://github.com/ropensci-archive/rodev", - "rel": "/software/repository/github/ropensci-archive/rodev", - "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", - "description": "Helpers for rOpenSci Package Authors :package: :sparkles:", + "uid": "github/jobovy/apogee", + "url": "https://github.com/jobovy/apogee", + "rel": "/software/repository/github/jobovy/apogee", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Tools for dealing with APOGEE data", "topics": [ - "r", - "r-package", - "rstats", - "scalereprod" + "astrophysics", + "python", + "spectroscopy", + "data", + "data-analysis", + "astronomy" ] }, { - "uid": "github/ropensci-archive/reviewer", - "url": "https://github.com/ropensci-archive/reviewer", - "rel": "/software/repository/github/ropensci-archive/reviewer", - "avatar": "https://avatars.githubusercontent.com/u/68704009?v=4", - "description": ":no_entry: ARCHIVED :no_entry: Improving the track changes and reviewing experience in R markdown", - "topics": [ - "ozunconf18", - "unconf", - "r", - "r-package", - "rstats", - "ozunconf18", - "unconf", - "scalereprod" - ] + "uid": "github/jobovy/segueSelect", + "url": "https://github.com/jobovy/segueSelect", + "rel": "/software/repository/github/jobovy/segueSelect", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Selection function for the SDSS/SEGUE survey (G and K star samples)", + "topics": [] }, { - "uid": "github/pyvisa/pyvisa", - "url": "https://github.com/pyvisa/pyvisa", - "rel": "/software/repository/github/pyvisa/pyvisa", - "avatar": "https://avatars.githubusercontent.com/u/29079824?v=4", - "description": "A Python package with bindings to the \"Virtual Instrument Software Architecture\" VISA library, in order to control measurement devices and test equipment via GPIB, RS232, or USB.", + "uid": "github/jobovy/simple-m2m", + "url": "https://github.com/jobovy/simple-m2m", + "rel": "/software/repository/github/jobovy/simple-m2m", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Simple M2M setup to explore some new ideas", "topics": [] }, { - "uid": "github/tudelft3d/3dfier", - "url": "https://github.com/tudelft3d/3dfier", - "rel": "/software/repository/github/tudelft3d/3dfier", - "avatar": "https://avatars.githubusercontent.com/u/1544391?v=4", - "description": "The open-source tool for creating of 3D models", + "uid": "github/jobovy/galpy", + "url": "https://github.com/jobovy/galpy", + "rel": "/software/repository/github/jobovy/galpy", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Galactic Dynamics in python", "topics": [ - "3dgis", - "gis", - "citygml", - "lidar", - "laz", - "cityjson", - "yaml-cpp", - "3d" + "astrophysics", + "astronomy", + "python", + "dynamics", + "scientific-computing", + "physics", + "astropy-affiliated" ] }, { - "uid": "github/phelelani/nf-rnaSeqMetagen", - "url": "https://github.com/phelelani/nf-rnaSeqMetagen", - "rel": "/software/repository/github/phelelani/nf-rnaSeqMetagen", - "avatar": "https://avatars.githubusercontent.com/u/12947600?v=4", - "description": "Metagenomics pipeline", - "topics": [] - }, - { - "uid": "github/phelelani/nf-rnaSeqCount", - "url": "https://github.com/phelelani/nf-rnaSeqCount", - "rel": "/software/repository/github/phelelani/nf-rnaSeqCount", - "avatar": "https://avatars.githubusercontent.com/u/12947600?v=4", - "description": "Assembly and differential expression analysis", - "topics": [] - }, - { - "uid": "github/tikk3r/lofar-h5plot", - "url": "https://github.com/tikk3r/lofar-h5plot", - "rel": "/software/repository/github/tikk3r/lofar-h5plot", - "avatar": "https://avatars.githubusercontent.com/u/2464769?v=4", - "description": "A small GUI for plotting H5Parms produced during LOFAR calibration.", - "topics": [] + "uid": "github/jobovy/gaia_tools", + "url": "https://github.com/jobovy/gaia_tools", + "rel": "/software/repository/github/jobovy/gaia_tools", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Tools for working with the @ESAGaia data and related data sets", + "topics": [ + "astrophysics", + "astronomy", + "gaia", + "python" + ] }, { - "uid": "github/tikk3r/legacystamps", - "url": "https://github.com/tikk3r/legacystamps", - "rel": "/software/repository/github/tikk3r/legacystamps", - "avatar": "https://avatars.githubusercontent.com/u/2464769?v=4", - "description": "A tiny Python module to allow easy retrieval of a cutout from the Legacy survey.", - "topics": [] + "uid": "github/jobovy/extreme-deconvolution", + "url": "https://github.com/jobovy/extreme-deconvolution", + "rel": "/software/repository/github/jobovy/extreme-deconvolution", + "avatar": "https://avatars.githubusercontent.com/u/1044876?v=4", + "description": "Density estimation using Gaussian mixtures in the presence of noisy, heterogeneous and incomplete data", + "topics": [ + "density-estimation", + "machine-learning", + "gaussian-mixture-models", + "python", + "c", + "uncertainty" + ] }, { - "uid": "github/snystrom/memes", - "url": "https://github.com/snystrom/memes", - "rel": "/software/repository/github/snystrom/memes", - "avatar": "https://avatars.githubusercontent.com/u/17264973?v=4", - "description": "An R interface to the MEME Suite", + "uid": "github/TommasoRonconi/scampy", + "url": "https://github.com/TommasoRonconi/scampy", + "rel": "/software/repository/github/TommasoRonconi/scampy", + "avatar": "https://avatars.githubusercontent.com/u/38346844?v=4", + "description": "A Python API for Sub-halo Clustering and Abundance Matching", "topics": [] }, { - "uid": "github/SALT-NIRWALS/nirwals", - "url": "https://github.com/SALT-NIRWALS/nirwals", - "rel": "/software/repository/github/SALT-NIRWALS/nirwals", - "avatar": "https://avatars.githubusercontent.com/u/95205451?v=4", - "description": null, - "topics": [] + "uid": "github/astroCV/astroCV", + "url": "https://github.com/astroCV/astroCV", + "rel": "/software/repository/github/astroCV/astroCV", + "avatar": "https://avatars.githubusercontent.com/u/29994772?v=4", + "description": "Computer Vision library for Astronomy", + "topics": [ + "computer-vision", + "image-processing", + "astronomy", + "lsst" + ] }, { - "uid": "github/metabolomicsworkbench/MetGENE", - "url": "https://github.com/metabolomicsworkbench/MetGENE", - "rel": "/software/repository/github/metabolomicsworkbench/MetGENE", - "avatar": "https://avatars.githubusercontent.com/u/55557713?v=4", - "description": "Gene-centric Metabolomics Information Retrieval Tool", - "topics": [] + "uid": "github/idaholab/moose", + "url": "https://github.com/idaholab/moose", + "rel": "/software/repository/github/idaholab/moose", + "avatar": "https://avatars0.githubusercontent.com/u/3855370?v=4", + "description": "Multiphysics Object Oriented Simulation Environment", + "topics": [ + "multiphysics", + "simulation", + "fem", + "finite-elements", + "object-oriented", + "parallel", + "amr" + ] }, { - "uid": "github/gorpipe/gor", - "url": "https://github.com/gorpipe/gor", - "rel": "/software/repository/github/gorpipe/gor", - "avatar": "https://avatars.githubusercontent.com/u/60776787?v=4", - "description": "GORpipe is a tool based on a genomic ordered relational architecture and allows analysis of large sets of genomic and phenotypic tabular data using declarative query language, in a parallel execution engine.", - "topics": [ - "genetics", - "genomics", - "gwas", - "bioinformatics", - "python", - "software", - "gor", - "gorpipe", - "vcf", - "spark", - "open-source", - "scala", - "java" + "uid": "github/idaholab/MontePy", + "url": "https://github.com/idaholab/MontePy", + "rel": "/software/repository/github/idaholab/MontePy", + "avatar": "https://avatars.githubusercontent.com/u/3855370?v=4", + "description": "MontePy is the most user friendly Python library (API) to read, edit, and write MCNP input files.", + "topics": [ + "mcnp6", + "monte-carlo", + "neutronics", + "api", + "radiation-transport", + "mcnp" ] }, { - "uid": "github/max0x7ba/atomic_queue", - "url": "https://github.com/max0x7ba/atomic_queue", - "rel": "/software/repository/github/max0x7ba/atomic_queue", - "avatar": "https://avatars.githubusercontent.com/u/765202?v=4", - "description": "C++ lockless queue.", + "uid": "github/extendr/extendr", + "url": "https://github.com/extendr/extendr", + "rel": "/software/repository/github/extendr/extendr", + "avatar": "https://avatars.githubusercontent.com/u/63346977?v=4", + "description": "R extension library for rust designed to be familiar to R users.", "topics": [ - "lock-free", - "lockfree", - "atomics", - "cplusplus", - "atomic", - "queue", - "multithreading", - "multi-threading", - "cpp", - "data-structures", - "datastructures", - "atomic-queues", - "ring-buffer-array", - "lockless", - "c-plus-plus", - "c-plusplus", - "circular-queue", - "benchmarks", - "low-latency", - "high-performance" + "rust", + "r", + "extension", + "api-wrapper", + "ffi-bindings" ] }, { - "uid": "github/silburt/DeepMoon", - "url": "https://github.com/silburt/DeepMoon", - "rel": "/software/repository/github/silburt/DeepMoon", - "avatar": "https://avatars.githubusercontent.com/u/9949184?v=4", - "description": "Convolutional neural network code for extracting Lunar craters from Digital Elevation Maps (DEMs).", + "uid": "github/UFParLab/aces4", + "url": "https://github.com/UFParLab/aces4", + "rel": "/software/repository/github/UFParLab/aces4", + "avatar": "https://avatars.githubusercontent.com/u/6758727?v=4", + "description": "Parallel Computational Chemistry Application", + "topics": [] + }, + { + "uid": "github/CEED/libCEED", + "url": "https://github.com/CEED/libCEED", + "rel": "/software/repository/github/CEED/libCEED", + "avatar": "https://avatars.githubusercontent.com/u/23178852?v=4", + "description": "CEED Library: Code for Efficient Extensible Discretizations", "topics": [ - "convnet", - "tensorflow", - "moon", - "astrophysics", - "keras", - "python", - "deep-learning", - "machine-learning" + "ceed", + "high-order", + "exascale-computing", + "api", + "ecp", + "high-performance-computing" ] }, { - "uid": "github/aineniamh/squirrel", - "url": "https://github.com/aineniamh/squirrel", - "rel": "/software/repository/github/aineniamh/squirrel", - "avatar": "https://avatars.githubusercontent.com/u/11678307?v=4", - "description": null, + "uid": "github/landlab/landlab", + "url": "https://github.com/landlab/landlab", + "rel": "/software/repository/github/landlab/landlab", + "avatar": "https://avatars1.githubusercontent.com/u/7543483?v=4", + "description": "Landlab codebase, wiki, and tests", "topics": [] }, { - "uid": "github/aineniamh/snipit", - "url": "https://github.com/aineniamh/snipit", - "rel": "/software/repository/github/aineniamh/snipit", - "avatar": "https://avatars.githubusercontent.com/u/11678307?v=4", - "description": "snipit: summarise snps relative to your reference sequence", + "uid": "github/hnikaein/stark", + "url": "https://github.com/hnikaein/stark", + "rel": "/software/repository/github/hnikaein/stark", + "avatar": "https://avatars.githubusercontent.com/u/3269519?v=4", + "description": "A tool for bluntifying a bidirected de bruijn graph by removing overlaps.", "topics": [] }, { - "uid": "github/xraypy/xraylarch", - "url": "https://github.com/xraypy/xraylarch", - "rel": "/software/repository/github/xraypy/xraylarch", - "avatar": "https://avatars.githubusercontent.com/u/1273713?v=4", - "description": "Larch: Applications and Python Library for Data Analysis of X-ray Absorption Spectroscopy (XAS, XANES, XAFS, EXAFS), X-ray Fluorescence (XRF) Spectroscopy and Imaging, and more.", + "uid": "github/grant-m-s/astronomicAL", + "url": "https://github.com/grant-m-s/AstronomicAL", + "rel": "/software/repository/github/grant-m-s/astronomicAL", + "avatar": "https://avatars.githubusercontent.com/u/12834844?v=4", + "description": "An interactive dashboard for visualisation, integration and classification of data using Active Learning.", "topics": [ + "machine-learning", + "active-learning", + "astronomy", + "interactive", + "labelling", "python", - "x-ray-absorption-fine-structure", - "x-ray-fluorescence", - "x-ray-physics", - "synchrotron" + "data-visualization" ] }, { - "uid": "github/dgarrimar/sqtlseeker2-nf", - "url": "https://github.com/dgarrimar/sqtlseeker2-nf", - "rel": "/software/repository/github/dgarrimar/sqtlseeker2-nf", - "avatar": "https://avatars2.githubusercontent.com/u/22029639?v=4", - "description": "An automated sQTL mapping pipeline using Nextflow", - "topics": [] - }, - { - "uid": "github/t00shadow/CryoDataBot", - "url": "https://github.com/t00shadow/CryoDataBot", - "rel": "/software/repository/github/t00shadow/CryoDataBot", - "avatar": "https://avatars.githubusercontent.com/u/111927716?v=4", - "description": "A Robust Pipeline for Curating High-Quality CryoEM Datasets for AI-Driven Structural Biology", - "topics": [] + "uid": "github/johnlee4/CoCoCoNet", + "url": "https://github.com/johnlee4/CoCoCoNet", + "rel": "/software/repository/github/johnlee4/CoCoCoNet", + "avatar": "https://avatars.githubusercontent.com/u/56409241?v=4", + "description": "Conserved and Comparative Co-expression across Diverse Species", + "topics": [ + "co-expression", + "comparative-genomics", + "conservation", + "gene-expression" + ] }, { - "uid": "github/RosettaCommons/RoseTTAFold", - "url": "https://github.com/RosettaCommons/RoseTTAFold", - "rel": "/software/repository/github/RosettaCommons/RoseTTAFold", - "avatar": "https://avatars.githubusercontent.com/u/3856847?v=4", - "description": "This package contains deep learning models and related scripts for RoseTTAFold", - "topics": [] + "uid": "github/zdelrosario/py_grama", + "url": "https://github.com/zdelrosario/py_grama", + "rel": "/software/repository/github/zdelrosario/py_grama", + "avatar": "https://avatars0.githubusercontent.com/u/6273681?v=4", + "description": "Implementation of a grammar of model analysis", + "topics": [ + "uq" + ] }, { - "uid": "github/RosettaCommons/RFDesign", - "url": "https://github.com/RosettaCommons/RFDesign", - "rel": "/software/repository/github/RosettaCommons/RFDesign", - "avatar": "https://avatars.githubusercontent.com/u/3856847?v=4", - "description": "Protein hallucination and inpainting with RoseTTAFold", + "uid": "github/ofionnad/radiowinds", + "url": "https://github.com/ofionnad/radiowinds", + "rel": "/software/repository/github/ofionnad/radiowinds", + "avatar": "https://avatars.githubusercontent.com/u/20027636?v=4", + "description": "Calculate the thermal bremsstrahlung emission from stellar winds", "topics": [] }, { - "uid": "github/CaymanUnterborn/ExoPlex", - "url": "https://github.com/CaymanUnterborn/ExoPlex", - "rel": "/software/repository/github/CaymanUnterborn/ExoPlex", - "avatar": "https://avatars.githubusercontent.com/u/7727288?v=4", - "description": "A thermodynamically self-consistent mass-radius-composition calculator", + "uid": "github/glotzerlab/freud", + "url": "https://github.com/glotzerlab/freud", + "rel": "/software/repository/github/glotzerlab/freud", + "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", + "description": "Powerful, efficient particle trajectory analysis in scientific Python.", "topics": [ - "exoplanets", - "interiors", - "mineralogy" + "molecular-dynamics", + "analysis", + "scientific-computing", + "python", + "monte-carlo-simulation", + "data-analysis", + "spatial-analysis", + "particle-system", + "computational-chemistry", + "computational-physics", + "science", + "hacktoberfest" ] }, { - "uid": "github/gear-genomics/dicey", - "url": "https://github.com/gear-genomics/dicey", - "rel": "/software/repository/github/gear-genomics/dicey", - "avatar": "https://avatars.githubusercontent.com/u/31348883?v=4", - "description": "In-silico PCR, primer design and padlock design for in-situ sequencing", + "uid": "github/glotzerlab/hoomd-blue", + "url": "https://github.com/glotzerlab/hoomd-blue", + "rel": "/software/repository/github/glotzerlab/hoomd-blue", + "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", + "description": "Molecular dynamics and Monte Carlo soft matter simulation on GPUs.", "topics": [ - "gear-genomics", - "pcr", - "primer", - "primer-design", - "in-silico", - "sanger-sequencing", - "amplicon", - "amplicon-sequencing", - "padlock", - "in-situ-sequencing" + "cuda", + "python", + "molecular-dynamics", + "hard-particle", + "hoomd-blue", + "simulation", + "gpu", + "singularity", + "docker", + "conda-forge", + "particle-system", + "monte-carlo-simulation" ] }, { - "uid": "github/gear-genomics/tracy", - "url": "https://github.com/gear-genomics/tracy", - "rel": "/software/repository/github/gear-genomics/tracy", - "avatar": "https://avatars.githubusercontent.com/u/31348883?v=4", - "description": "Basecalling, alignment, assembly and deconvolution of Sanger Chromatogram trace files", + "uid": "github/glotzerlab/coxeter", + "url": "https://github.com/glotzerlab/coxeter", + "rel": "/software/repository/github/glotzerlab/coxeter", + "avatar": "https://avatars.githubusercontent.com/u/25832198?v=4", + "description": "Collection of tools to help initialize and manipulate shapes.", "topics": [ - "chromatogram", - "pcr", - "tracy", - "sanger-trace-alignment", - "sanger-sequencing", - "sequencing", - "variant-calling", - "alignment", - "genetic-engineering", - "pcr-products", - "crispr-cas9", - "crispr-analysis", - "indel", - "indel-discovery", - "sanger-chromatograms" + "geometry", + "shapes", + "physics", + "computational-geometry", + "polyhedra", + "polygons" ] }, { - "uid": "github/heuermh/dishevelled-bio", - "url": "https://github.com/heuermh/dishevelled-bio", - "rel": "/software/repository/github/heuermh/dishevelled-bio", - "avatar": "https://avatars.githubusercontent.com/u/35293?v=4", - "description": "dishevelled.org bio", + "uid": "github/DLR-AMR/t8code", + "url": "https://github.com/DLR-AMR/t8code", + "rel": "/software/repository/github/DLR-AMR/t8code", + "avatar": "https://avatars.githubusercontent.com/u/109299884?v=4", + "description": "Parallel algorithms and data structures for tree-based adaptive mesh refinement (AMR) with arbitrary element shapes.", "topics": [ - "bioinformatics" + "high-performance-computing", + "adaptive-mesh-refinement", + "mesh", + "simulation", + "mpi", + "parallel", + "parallel-computing", + "hpc", + "modeling" ] }, { - "uid": "github/rcsb/mmtf-python", - "url": "https://github.com/rcsb/mmtf-python", - "rel": "/software/repository/github/rcsb/mmtf-python", - "avatar": "https://avatars.githubusercontent.com/u/4259216?v=4", - "description": "The python implementation of the MMTF API, decoder and encoder.", + "uid": "github/mostanes/umbrella2", + "url": "https://github.com/mostanes/umbrella2", + "rel": "/software/repository/github/mostanes/umbrella2", + "avatar": "https://avatars.githubusercontent.com/u/26716644?v=4", + "description": "Highly modular open-source asteroid detection library written under dotnet.", "topics": [] }, { - "uid": "github/iterize/tenta", - "url": "https://github.com/iterize/tenta", - "rel": "/software/repository/github/iterize/tenta", - "avatar": "https://avatars.githubusercontent.com/u/137326893?v=4", - "description": "Manage your sensors remotely and in real-time", + "uid": "github/Jinsl-lab/SDImpute", + "url": "https://github.com/Jinsl-lab/SDImpute", + "rel": "/software/repository/github/Jinsl-lab/SDImpute", + "avatar": "https://avatars.githubusercontent.com/u/65643584?v=4", + "description": "A R package.", + "topics": [] + }, + { + "uid": "github/UTEL-UIUC/gtfs_segments", + "url": "https://github.com/UTEL-UIUC/gtfs_segments", + "rel": "/software/repository/github/UTEL-UIUC/gtfs_segments", + "avatar": "https://avatars.githubusercontent.com/u/90534722?v=4", + "description": "GTFS Segments: A fast and efficient library to generate bus stop spacings", "topics": [ - "dashboard", - "internet-of-things", - "iot", - "mqtt", - "network", + "bus", + "stop", + "distribution", + "gtfs-feed", "python", - "real-time", - "sensor" + "transit", + "transit-data" ] }, { - "uid": "github/anddssan/CLOUDe", - "url": "https://github.com/anddssan/CLOUDe", - "rel": "/software/repository/github/anddssan/CLOUDe", - "avatar": "https://avatars.githubusercontent.com/u/19232027?v=4", - "description": "CLOUDe is an R implementation of Campelo dos Santos, DeGiorgio and Assis' (2023) suite of machine learning methods for predicting evolutionary targets of gene deletion events from expression data in two species.", + "uid": "github/cas-bioinf/rboAnalyzer", + "url": "https://github.com/cas-bioinf/rboAnalyzer", + "rel": "/software/repository/github/cas-bioinf/rboAnalyzer", + "avatar": "https://avatars1.githubusercontent.com/u/25302416?v=4", + "description": "Tool for analysing BLAST output for ncRNA sequences", + "topics": [ + "rna", + "rna-structure-prediction", + "blast", + "blast-search" + ] + }, + { + "uid": "github/hemantaph/ler", + "url": "https://github.com/hemantaph/ler", + "rel": "/software/repository/github/hemantaph/ler", + "avatar": "https://avatars.githubusercontent.com/u/53345498?v=4", + "description": "Gravitational waves lensing rate calculator", "topics": [] }, { - "uid": "github/TinkerTools/Tinker-HP", - "url": "https://github.com/TinkerTools/tinker-hp", - "rel": "/software/repository/github/TinkerTools/Tinker-HP", - "avatar": "https://avatars.githubusercontent.com/u/39835945?v=4", - "description": "Tinker-HP: High-Performance Massively Parallel Evolution of Tinker on CPUs & GPUs", + "uid": "github/hemantaph/gwsnr", + "url": "https://github.com/hemantaph/gwsnr", + "rel": "/software/repository/github/hemantaph/gwsnr", + "avatar": "https://avatars.githubusercontent.com/u/53345498?v=4", + "description": null, "topics": [] }, { - "uid": "github/TinkerTools/tinker9", - "url": "https://github.com/TinkerTools/tinker9", - "rel": "/software/repository/github/TinkerTools/tinker9", - "avatar": "https://avatars.githubusercontent.com/u/39835945?v=4", - "description": "Tinker9: Next Generation of Tinker with GPU Support", - "topics": [ - "molecular-dynamics", - "molecular-mechanics", - "force-fields", - "biomolecular-simulation", - "molecular-modeling", - "gpu-computing" - ] + "uid": "github/DJArmstrong/TransitSOM", + "url": "https://github.com/DJArmstrong/TransitSOM", + "rel": "/software/repository/github/DJArmstrong/TransitSOM", + "avatar": "https://avatars.githubusercontent.com/u/20772547?v=4", + "description": "A Self-Organising Map for Kepler and K2 Transits", + "topics": [] }, { - "uid": "github/samsledje/ConPLex_dev", - "url": "https://github.com/samsledje/ConPLex_dev", - "rel": "/software/repository/github/samsledje/ConPLex_dev", - "avatar": "https://avatars.githubusercontent.com/u/23251453?v=4", - "description": null, + "uid": "github/H-E-L-P/XID_plus", + "url": "https://github.com/H-E-L-P/XID_plus", + "rel": "/software/repository/github/H-E-L-P/XID_plus", + "avatar": "https://avatars.githubusercontent.com/u/7880370?v=4", + "description": "Next generation XID development", "topics": [] }, { - "uid": "github/ziyewang/ARG_SHINE", - "url": "https://github.com/ziyewang/ARG_SHINE", - "rel": "/software/repository/github/ziyewang/ARG_SHINE", - "avatar": "https://avatars.githubusercontent.com/u/37959011?v=4", - "description": null, + "uid": "github/jpcoles/mosaic", + "url": "https://github.com/jpcoles/mosaic", + "rel": "/software/repository/github/jpcoles/mosaic", + "avatar": "https://avatars.githubusercontent.com/u/2162148?v=4", + "description": "Multipole Operators in Symbols, Automatically Improved and Condensed", "topics": [] }, { - "uid": "github/ziyewang/MetaBinner", - "url": "https://github.com/ziyewang/MetaBinner", - "rel": "/software/repository/github/ziyewang/MetaBinner", - "avatar": "https://avatars.githubusercontent.com/u/37959011?v=4", - "description": null, + "uid": "github/jpcoles/glass", + "url": "https://github.com/jpcoles/glass", + "rel": "/software/repository/github/jpcoles/glass", + "avatar": "https://avatars.githubusercontent.com/u/2162148?v=4", + "description": "A parallel, free-form gravitational lens modeling tool and framework", "topics": [] }, { - "uid": "github/nlesc-dirac/sagecal", - "url": "https://github.com/nlesc-dirac/sagecal", - "rel": "/software/repository/github/nlesc-dirac/sagecal", - "avatar": "https://avatars0.githubusercontent.com/u/26144311?v=4", - "description": "SAGECal is a very fast, memory efficient and GPU accelerated radio interferometric calibration program. It supports all source models including points, Gaussians and Shapelets. Distributed calibration using MPI and consensus optimization is enabled. Tools to build/restore sky models are included.", + "uid": "github/DLR-RM/BlenderProc", + "url": "https://github.com/DLR-RM/BlenderProc", + "rel": "/software/repository/github/DLR-RM/BlenderProc", + "avatar": "https://avatars.githubusercontent.com/u/25227811?v=4", + "description": "A procedural Blender pipeline for photorealistic training image generation", "topics": [ - "lofar", - "ska", - "calibration", - "admm", - "cuda", - "nonlinear-optimization", - "radio-astronomy" + "blender-pipeline", + "segmentation", + "depth-images", + "camera-positions", + "suncg-scene", + "camera-sampling", + "blender-installation", + "synthetic", + "blender", + "rendering", + "pose-estimation", + "synthetic-data", + "python", + "3d-graphics", + "computer-graphics", + "3d-reconstruction", + "3d-engines", + "3d-front-dataset" ] }, { - "uid": "github/milicolazo/Pyedra", - "url": "https://github.com/milicolazo/Pyedra", - "rel": "/software/repository/github/milicolazo/Pyedra", - "avatar": "https://avatars.githubusercontent.com/u/43006757?v=4", + "uid": "github/weizhouUMICH/SAIGE", + "url": "https://github.com/weizhouUMICH/SAIGE", + "rel": "/software/repository/github/weizhouUMICH/SAIGE", + "avatar": "https://avatars.githubusercontent.com/u/9952559?v=4", "description": null, "topics": [] }, { - "uid": "github/SJLeo/FFSD", - "url": "https://github.com/SJLeo/FFSD", - "rel": "/software/repository/github/SJLeo/FFSD", - "avatar": "https://avatars.githubusercontent.com/u/25793304?v=4", - "description": "Pytorch implementation of our paper accepted by IEEE TNNLS, 2022 -- Distilling a Powerful Student Model via Online Knowledge Distillation", + "uid": "github/jorgefz/photoevolver", + "url": "https://github.com/jorgefz/photoevolver", + "rel": "/software/repository/github/jorgefz/photoevolver", + "avatar": "https://avatars.githubusercontent.com/u/55992591?v=4", + "description": "Planet evolver that takes into account energy-limited photoevaporation, the star's XUV history, and the planet's internal structure", "topics": [] }, { - "uid": "github/LalResearchGroup/CNV-clinviewer", - "url": "https://github.com/LalResearchGroup/CNV-clinviewer", - "rel": "/software/repository/github/LalResearchGroup/CNV-clinviewer", - "avatar": "https://avatars.githubusercontent.com/u/98547504?v=4", + "uid": "github/lzx325/DeeReCT-APA-repo", + "url": "https://github.com/lzx325/DeeReCT-APA-repo", + "rel": "/software/repository/github/lzx325/DeeReCT-APA-repo", + "avatar": "https://avatars.githubusercontent.com/u/18619553?v=4", "description": null, "topics": [] }, { - "uid": "github/arabic-digital-humanities/adhtools", - "url": "https://github.com/arabic-digital-humanities/adhtools", - "rel": "/software/repository/github/arabic-digital-humanities/adhtools", - "avatar": "https://avatars3.githubusercontent.com/u/35798486?v=4", - "description": "Scripts for manipulating Arabic texts", - "topics": [] - }, - { - "uid": "github/pixixiaonaogou/MLSDR", - "url": "https://github.com/pixixiaonaogou/MLSDR", - "rel": "/software/repository/github/pixixiaonaogou/MLSDR", - "avatar": "https://avatars.githubusercontent.com/u/34858642?v=4", - "description": null, + "uid": "github/kimberg/voxbo", + "url": "https://github.com/kimberg/voxbo", + "rel": "/software/repository/github/kimberg/voxbo", + "avatar": "https://avatars.githubusercontent.com/u/754848?v=4", + "description": "free software for brain image analysis", "topics": [] }, { - "uid": "github/omuse-geoscience/omuse", - "url": "https://github.com/omuse-geoscience/omuse", - "rel": "/software/repository/github/omuse-geoscience/omuse", - "avatar": "https://avatars.githubusercontent.com/u/61740914?v=4", - "description": " The Oceanographic Multi-purpose Software Environment: a package for multi-physics and multi-scale earth science simulations.", - "topics": [] + "uid": "github/GooglingTheCancerGenome/sv-gen", + "url": "https://github.com/GooglingTheCancerGenome/sv-gen", + "rel": "/software/repository/github/GooglingTheCancerGenome/sv-gen", + "avatar": "https://avatars1.githubusercontent.com/u/27248218?v=4", + "description": "Snakemake-based workflow for generating artificial genomes with structural variants", + "topics": [ + "bioinformatics", + "structural-variants", + "cancer-genomics", + "wgs", + "simulator", + "workflow", + "snakemake", + "hpc-applications" + ] }, { - "uid": "github/Yingjie4Science/SDGdetector", - "url": "https://github.com/Yingjie4Science/SDGdetector", - "rel": "/software/repository/github/Yingjie4Science/SDGdetector", - "avatar": "https://avatars.githubusercontent.com/u/40079217?v=4", - "description": "A novel R package that can identify and visualize 17 Sustainable Development Goals and associated 169 Targets in text", + "uid": "github/GooglingTheCancerGenome/sv-callers", + "url": "https://github.com/GooglingTheCancerGenome/sv-callers", + "rel": "/software/repository/github/GooglingTheCancerGenome/sv-callers", + "avatar": "https://avatars1.githubusercontent.com/u/27248218?v=4", + "description": "Snakemake-based workflow for detecting structural variants in WGS data", "topics": [ - "r-package", - "sdg", - "sdgs", - "sustainable-development-goals", - "text-mining" + "bioinformatics", + "structural-variants", + "sv-calling", + "germline-variants", + "somatic-variants", + "cancer-genomics", + "wgs", + "workflow", + "snakemake", + "hpc-applications" ] }, { - "uid": "github/HalHaggard/EARL", - "url": "https://github.com/HalHaggard/EARL", - "rel": "/software/repository/github/HalHaggard/EARL", - "avatar": "https://avatars.githubusercontent.com/u/35935417?v=4", - "description": "Exoplanet Analytic Reflected Lightcurves (EARL): This Mathematica code allows you to compute the analytic form of a reflected lightcurve given a spherical harmonic decomposition of the planet albedo map and the viewing and orbital geometries. The theoretical foundation for this code is laid out in the paper \"Analytic Reflected Lightcurves for Exoplanets\" by Hal M. Haggard and Nicolas B. Cowan, which can be found the arXiv.", + "uid": "github/GooglingTheCancerGenome/sv-channels", + "url": "https://github.com/GooglingTheCancerGenome/sv-channels", + "rel": "/software/repository/github/GooglingTheCancerGenome/sv-channels", + "avatar": "https://avatars.githubusercontent.com/u/27248218?v=4", + "description": "Deep learning-based structural variant caller", "topics": [] }, { - "uid": "github/IPK-BIT/divbrowse", - "url": "https://github.com/IPK-BIT/divbrowse", - "rel": "/software/repository/github/IPK-BIT/divbrowse", - "avatar": "https://avatars.githubusercontent.com/u/60338646?v=4", - "description": "A web application for interactive exploration and analysis of very large SNP matrices", + "uid": "github/fuyw-aisw/GALA", + "url": "https://github.com/fuyw-aisw/GALA", + "rel": "/software/repository/github/fuyw-aisw/GALA", + "avatar": "https://avatars.githubusercontent.com/u/118046924?v=4", + "description": null, "topics": [] }, { - "uid": "github/LiShuTJ/NDNet", - "url": "https://github.com/LiShuTJ/NDNet", - "rel": "/software/repository/github/LiShuTJ/NDNet", - "avatar": "https://avatars.githubusercontent.com/u/100602054?v=4", - "description": null, + "uid": "github/NETL-RIC/URC-Assessment-Method", + "url": "https://github.com/NETL-RIC/URC-Assessment-Method", + "rel": "/software/repository/github/NETL-RIC/URC-Assessment-Method", + "avatar": "https://avatars.githubusercontent.com/u/28026492?v=4", + "description": "Tool for evaluating the potential occurrence of URC resources using a series of validated heuristics.", "topics": [] }, { - "uid": "github/hartwigmedical/hmftools", - "url": "https://github.com/hartwigmedical/hmftools", - "rel": "/software/repository/github/hartwigmedical/hmftools", - "avatar": "https://avatars.githubusercontent.com/u/16318013?v=4", - "description": "Various algorithms for analysing genomics data", - "topics": [] + "uid": "github/T0ngChen/medRCT", + "url": "https://github.com/T0ngChen/medRCT", + "rel": "/software/repository/github/T0ngChen/medRCT", + "avatar": "https://avatars.githubusercontent.com/u/44077157?v=4", + "description": "\ud83d\udce6R package medRCT", + "topics": [ + "causal-inference", + "causal-mediation-analysis", + "interventional-effects", + "mediation", + "target-trial", + "rstats", + "mediation-analysis", + "rstat", + "rstats-package" + ] }, { - "uid": "github/thomasdenecker/START-R", - "url": "https://github.com/thomasdenecker/START-R", - "rel": "/software/repository/github/thomasdenecker/START-R", - "avatar": "https://avatars2.githubusercontent.com/u/21334113?v=4", - "description": "Simple Tool for Analysis of Replication Timing with R", + "uid": "github/VBlesius/RHRT", + "url": "https://github.com/VBlesius/RHRT", + "rel": "/software/repository/github/VBlesius/RHRT", + "avatar": "https://avatars.githubusercontent.com/u/71442854?v=4", + "description": "R package to assess Heart Rate Turbulence from RR interval data", "topics": [] }, { - "uid": "github/chenjj2/forecaster", - "url": "https://github.com/chenjj2/forecaster", - "rel": "/software/repository/github/chenjj2/forecaster", - "avatar": "https://avatars.githubusercontent.com/u/7421301?v=4", + "uid": "github/yogi-tud/space_gpu", + "url": "https://github.com/yogi-tud/space_gpu", + "rel": "/software/repository/github/yogi-tud/space_gpu", + "avatar": "https://avatars.githubusercontent.com/u/6371841?v=4", "description": null, "topics": [] }, { - "uid": "github/jfmrod/MAPseq", - "url": "https://github.com/jfmrod/MAPseq", - "rel": "/software/repository/github/jfmrod/MAPseq", - "avatar": "https://avatars.githubusercontent.com/u/5286814?v=4", - "description": "highthroughput rRNA sequence classification and OTU mapping for metagenomic samples", + "uid": "github/mkargo/pipeline", + "url": "https://github.com/mkargo/pipeline", + "rel": "/software/repository/github/mkargo/pipeline", + "avatar": "https://avatars.githubusercontent.com/u/7713971?v=4", + "description": "Data reduction pipeline for e-MERLIN", "topics": [] }, { - "uid": "github/wordsworthgroup/mars_redox_2021", - "url": "https://github.com/wordsworthgroup/mars_redox_2021", - "rel": "/software/repository/github/wordsworthgroup/mars_redox_2021", - "avatar": "https://avatars.githubusercontent.com/u/10161055?v=4", - "description": null, + "uid": "github/IlianPihlajamaa/ModeCouplingTheory.jl", + "url": "https://github.com/IlianPihlajamaa/ModeCouplingTheory.jl", + "rel": "/software/repository/github/IlianPihlajamaa/ModeCouplingTheory.jl", + "avatar": "https://avatars.githubusercontent.com/u/73794090?v=4", + "description": "A generic and fast solver of mode-coupling theory-like integrodifferential equations", + "topics": [ + "differential-equations", + "julia" + ] + }, + { + "uid": "github/21cmFAST/21cmFAST", + "url": "https://github.com/21cmfast/21cmFAST", + "rel": "/software/repository/github/21cmFAST/21cmFAST", + "avatar": "https://avatars1.githubusercontent.com/u/51762336?v=4", + "description": "Official repository for 21cmFAST: a code for generating fast simulations of the cosmological 21cm signal", "topics": [] }, { - "uid": "github/pyFFTW/pyFFTW", - "url": "https://github.com/pyFFTW/pyFFTW", - "rel": "/software/repository/github/pyFFTW/pyFFTW", - "avatar": "https://avatars.githubusercontent.com/u/16965121?v=4", - "description": "A pythonic python wrapper around FFTW", + "uid": "github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", + "url": "https://github.com/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", + "rel": "/software/repository/github/frarei312/ExceS-A-An-Exon-Centric-Split-Aligner", + "avatar": "https://avatars.githubusercontent.com/u/52074443?v=4", + "description": null, "topics": [] }, { - "uid": "github/jradcliffe5/multi_self_cal", - "url": "https://github.com/jradcliffe5/multi_self_cal", - "rel": "/software/repository/github/jradcliffe5/multi_self_cal", - "avatar": "https://avatars.githubusercontent.com/u/11754064?v=4", - "description": "Multi-Source Self-Calibration is a Parseltongue (Kettenis et al. 2012) script which provides an extra calibration for VLBI data sets that image multiple target source within one observation. More information is in the README & paper Radcliffe et. al 2016. If you use this script please reference Radcliffe et al. 2016 which is the paper that accompanies this release.", + "uid": "github/DEIB-GECO/BC_Intrinsic_subtyping", + "url": "https://github.com/DEIB-GECO/BC_Intrinsic_subtyping", + "rel": "/software/repository/github/DEIB-GECO/BC_Intrinsic_subtyping", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": null, "topics": [] }, { - "uid": "github/pedronachtigall/ToxCodAn-Genome", - "url": "https://github.com/pedronachtigall/ToxCodAn-Genome", - "rel": "/software/repository/github/pedronachtigall/ToxCodAn-Genome", - "avatar": "https://avatars.githubusercontent.com/u/32197975?v=4", - "description": "Toxin genes annotation in genome assembly", + "uid": "github/DEIB-GECO/MutViz", + "url": "https://github.com/DEIB-GECO/MutViz", + "rel": "/software/repository/github/DEIB-GECO/MutViz", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "MutViz - Analysis and Visualization of Mutation Enrichments for Selected Genomic Regions and Cancer Types", "topics": [] }, { - "uid": "github/RECETOX/recetox-xMSannotator", - "url": "https://github.com/RECETOX/recetox-xMSannotator", - "rel": "/software/repository/github/RECETOX/recetox-xMSannotator", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", - "description": "This is a custom adaptation of the original version of xMSannotator. It is a complete rewrite of the original functionality, following the same program structure.", + "uid": "github/DEIB-GECO/CRIS_single-sample", + "url": "https://github.com/DEIB-GECO/CRIS_single-sample", + "rel": "/software/repository/github/DEIB-GECO/CRIS_single-sample", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "Single-sample classifiers for CRIS on colorectal cancer data", "topics": [ - "mass-spectrometry", - "hacktoberfest" + "bioinformatics", + "oncogenomics" ] }, { - "uid": "github/RECETOX/wtv", - "url": "https://github.com/RECETOX/wtv", - "rel": "/software/repository/github/RECETOX/wtv", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", - "description": "An implementation of ion selection based on WTV-2.0", - "topics": [] + "uid": "github/DEIB-GECO/GeneNetFusion", + "url": "https://github.com/DEIB-GECO/GeneNetFusion", + "rel": "/software/repository/github/DEIB-GECO/GeneNetFusion", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": null, + "topics": [ + "co-expression", + "complex-networks", + "gene-network-inference", + "gene-expression-profiles", + "network-fusion", + "biomarkers" + ] }, { - "uid": "github/RECETOX/recetox-msfinder", - "url": "https://github.com/RECETOX/recetox-msfinder", - "rel": "/software/repository/github/RECETOX/recetox-msfinder", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "uid": "github/DEIB-GECO/flu-warning-system", + "url": "https://github.com/DEIB-GECO/flu-warning-system", + "rel": "/software/repository/github/DEIB-GECO/flu-warning-system", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", "description": null, "topics": [] }, { - "uid": "github/RECETOX/MSMetaEnhancer", - "url": "https://github.com/RECETOX/MSMetaEnhancer", - "rel": "/software/repository/github/RECETOX/MSMetaEnhancer", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", - "description": "Tool for mass spectra metadata annotation.", + "uid": "github/DEIB-GECO/CombSAFE", + "url": "https://github.com/DEIB-GECO/CombSAFE", + "rel": "/software/repository/github/DEIB-GECO/CombSAFE", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "Combinatorial and Semantic Analysis of Functional Elements", "topics": [ - "hacktoberfest", - "annotations", - "python", - "usegalaxy", - "mass-spectrometry" + "epigenetics", + "semantic-annotation", + "big-data-analysis", + "chromatin-state" ] }, { - "uid": "github/RECETOX/recetox-aplcms", - "url": "https://github.com/RECETOX/recetox-aplcms", - "rel": "/software/repository/github/RECETOX/recetox-aplcms", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", - "description": "This is a custom fork of apLCMS containing adaptations for large scale studies.", - "topics": [ - "mass-spectrometry", - "peak-detection", - "lcms", - "hacktoberfest" - ] + "uid": "github/DEIB-GECO/genereg", + "url": "https://github.com/DEIB-GECO/genereg", + "rel": "/software/repository/github/DEIB-GECO/genereg", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "Python library for the analysis of gene expression regulation systems of genes of interest in TCGA cancers.", + "topics": [] }, { - "uid": "github/RECETOX/RIAssigner", - "url": "https://github.com/RECETOX/RIAssigner", - "rel": "/software/repository/github/RECETOX/RIAssigner", - "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", - "description": "RIAssigner is a python tool for retention index (RI) computation for GC-MS data.", - "topics": [ - "mass-spectrometry", - "hacktoberfest" - ] + "uid": "github/DEIB-GECO/ReRa", + "url": "https://github.com/DEIB-GECO/ReRa", + "rel": "/software/repository/github/DEIB-GECO/ReRa", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "Supervised Relevance-Redundancy assessments for feature selection in omics-based classification", + "topics": [] }, { - "uid": "github/jellis18/PTMCMCSampler", - "url": "https://github.com/jellis18/PTMCMCSampler", - "rel": "/software/repository/github/jellis18/PTMCMCSampler", - "avatar": "https://avatars.githubusercontent.com/u/3458354?v=4", - "description": "Parallel tempering MCMC sampler package written in Python", + "uid": "github/DEIB-GECO/VarSum", + "url": "https://github.com/DEIB-GECO/VarSum", + "rel": "/software/repository/github/DEIB-GECO/VarSum", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "Data summarization tool for 1000 Genomes Project data", "topics": [] }, { - "uid": "github/antoinediez/Sisyphe", - "url": "https://github.com/antoinediez/Sisyphe", - "rel": "/software/repository/github/antoinediez/Sisyphe", - "avatar": "https://avatars.githubusercontent.com/u/70896255?v=4", - "description": "Simulation of Systems of interacting mean-field Particles with High Efficiency", - "topics": [ - "particles", - "gpu", - "mean-field", - "self-organization", - "swarming", - "agent-based-simulation", - "agent-based-model" - ] + "uid": "github/DEIB-GECO/OpenGDC", + "url": "https://github.com/DEIB-GECO/OpenGDC", + "rel": "/software/repository/github/DEIB-GECO/OpenGDC", + "avatar": "https://avatars.githubusercontent.com/u/26458078?v=4", + "description": "An open-source Java tool to automatically extract and convert all clinical and genomic data from the Genomic Data Commons to BED, GTF, CSV, and JSON format", + "topics": [] }, { - "uid": "github/COVID-IWG/epimargin", - "url": "https://github.com/COVID-IWG/epimargin", - "rel": "/software/repository/github/COVID-IWG/epimargin", - "avatar": "https://avatars.githubusercontent.com/u/82750933?v=4", - "description": "networked, stochastic SIRD epidemiological model with Bayesian parameter estimation and policy scenario comparison tools ", - "topics": [ - "covid19", - "bayesian-methods", - "india", - "sird-model", - "stochastic-modeling" - ] + "uid": "github/OPUS-MaLab/opus_fold3", + "url": "https://github.com/OPUS-MaLab/opus_fold3", + "rel": "/software/repository/github/OPUS-MaLab/opus_fold3", + "avatar": "https://avatars.githubusercontent.com/u/82582402?v=4", + "description": null, + "topics": [] }, { - "uid": "github/philip-long/constrained_manipulability", - "url": "https://github.com/philip-long/constrained_manipulability", - "rel": "/software/repository/github/philip-long/constrained_manipulability", - "avatar": "https://avatars.githubusercontent.com/u/12842810?v=4", - "description": "Constrained Manipulability is a library used to compute and visualize a robot's capacities in constrained environments. ", + "uid": "github/DrJCarson/BoundedCoalescent", + "url": "https://github.com/DrJCarson/BoundedCoalescent", + "rel": "/software/repository/github/DrJCarson/BoundedCoalescent", + "avatar": "https://avatars.githubusercontent.com/u/9008332?v=4", + "description": "Sampling and likelihood estimation for the bounded coalescent", "topics": [] }, { - "uid": "github/philip-long/robot_collision_checking", - "url": "https://github.com/philip-long/robot_collision_checking", - "rel": "/software/repository/github/philip-long/robot_collision_checking", - "avatar": "https://avatars.githubusercontent.com/u/12842810?v=4", - "description": "A ROS interface to FCL collision checking", + "uid": "github/vanheeringen-lab/gimmemotifs", + "url": "https://github.com/vanheeringen-lab/gimmemotifs", + "rel": "/software/repository/github/vanheeringen-lab/gimmemotifs", + "avatar": "https://avatars.githubusercontent.com/u/42635190?v=4", + "description": "Suite of motif tools, including a motif prediction pipeline for ChIP-seq experiments. See full GimmeMotifs documentation for detailed installation instructions and usage examples.", "topics": [] }, { - "uid": "github/SevgiAkten/pycellga", - "url": "https://github.com/SevgiAkten/pycellga", - "rel": "/software/repository/github/SevgiAkten/pycellga", - "avatar": "https://avatars.githubusercontent.com/u/43684746?v=4", - "description": "Cellular Genetic Algorithms in Python.", + "uid": "github/cmillion/gPhoton", + "url": "https://github.com/cmillion/gPhoton", + "rel": "/software/repository/github/cmillion/gPhoton", + "avatar": "https://avatars.githubusercontent.com/u/1483210?v=4", + "description": "The GALEX photon database and tools project.", + "topics": [] + }, + { + "uid": "github/Heldenkombinat/Logodetect", + "url": "https://github.com/Heldenkombinat/Logodetect", + "rel": "/software/repository/github/Heldenkombinat/Logodetect", + "avatar": "https://avatars.githubusercontent.com/u/29208764?v=4", + "description": "Find logos in images and videos in just one-shot. Never be embarrassed again to say that you have a small data situation!", "topics": [ - "cga", - "ieee-754", - "optimization", - "python", - "cellulargeneticalgorithm", - "machinecodedoperators" + "one-shot-learning", + "logo-detection", + "object-detection", + "image-processing", + "video-processing", + "small-dataset" ] }, { - "uid": "github/seung-lab/FlyWirePaper", - "url": "https://github.com/seung-lab/FlyWirePaper", - "rel": "/software/repository/github/seung-lab/FlyWirePaper", - "avatar": "https://avatars.githubusercontent.com/u/796718?v=4", - "description": "Source code and data to reproduce analyses from the FlyWire paper.", + "uid": "github/ferdymercury/amide", + "url": "https://github.com/ferdymercury/amide", + "rel": "/software/repository/github/ferdymercury/amide", + "avatar": "https://avatars.githubusercontent.com/u/10653970?v=4", + "description": "AMIDE: a Medical Imaging Data Examiner", "topics": [] }, { - "uid": "github/Schulik/aiolos", - "url": "https://github.com/Schulik/aiolos", - "rel": "/software/repository/github/Schulik/aiolos", - "avatar": "https://avatars.githubusercontent.com/u/72578233?v=4", - "description": "1-D hydrodynamics code for planetary atmosphere accretion and escape simulations", - "topics": [ - "computational-fluid-dynamics", - "gas-dynamics", - "radiation-transport", - "reacting-flow-simulations" - ] + "uid": "github/MeasureTransport/MParT", + "url": "https://github.com/MeasureTransport/MParT", + "rel": "/software/repository/github/MeasureTransport/MParT", + "avatar": "https://avatars.githubusercontent.com/u/97112235?v=4", + "description": "Monotone Parameterization Toolkit (MParT): A core library for constructing and using transport maps.", + "topics": [] }, { - "uid": "github/ryanhausen/fitsmap", - "url": "https://github.com/ryanhausen/fitsmap", - "rel": "/software/repository/github/ryanhausen/fitsmap", - "avatar": "https://avatars.githubusercontent.com/u/13540823?v=4", - "description": "FitsMap: A Simple, Lightweight Tool For Displaying Interactive Astronomical Image and Catalog Data", + "uid": "github/webbjj/clustertools", + "url": "https://github.com/webbjj/clustertools", + "rel": "/software/repository/github/webbjj/clustertools", + "avatar": "https://avatars.githubusercontent.com/u/8258656?v=4", + "description": "A Python package with tools for analysing star clusters.", "topics": [] }, { - "uid": "github/bsafdi/stellarWakes", - "url": "https://github.com/bsafdi/stellarWakes", - "rel": "/software/repository/github/bsafdi/stellarWakes", - "avatar": "https://avatars.githubusercontent.com/u/11068813?v=4", - "description": "Python package for dark matter subhalo searches using stellar kinematic data", + "uid": "github/webbjj/m2mcluster", + "url": "https://github.com/webbjj/m2mcluster", + "rel": "/software/repository/github/webbjj/m2mcluster", + "avatar": "https://avatars.githubusercontent.com/u/8258656?v=4", + "description": "A code for made to measure modelling of star clusters", "topics": [] }, { - "uid": "github/akinremisa/rfsed", - "url": "https://github.com/akinremisa/rfsed", - "rel": "/software/repository/github/akinremisa/rfsed", - "avatar": "https://avatars.githubusercontent.com/u/107252532?v=4", - "description": "Package for standard and sediment correction receiver functions analysis", + "uid": "github/smeingast/PNICER", + "url": "https://github.com/smeingast/PNICER", + "rel": "/software/repository/github/smeingast/PNICER", + "avatar": "https://avatars.githubusercontent.com/u/4977153?v=4", + "description": null, "topics": [] }, { - "uid": "github/TianlaiProject/tlpipe", - "url": "https://github.com/TianlaiProject/tlpipe", - "rel": "/software/repository/github/TianlaiProject/tlpipe", - "avatar": "https://avatars.githubusercontent.com/u/15796092?v=4", - "description": "The Tianlai pipeline.", + "uid": "github/thomaswilliamsastro/mcfine", + "url": "https://github.com/thomaswilliamsastro/mcfine", + "rel": "/software/repository/github/thomaswilliamsastro/mcfine", + "avatar": "https://avatars.githubusercontent.com/u/32936518?v=4", + "description": "Muli-component, hyperfine fitting tool", "topics": [] }, { - "uid": "github/cosmoinin/MGPT", - "url": "https://github.com/cosmoinin/MGPT", - "rel": "/software/repository/github/cosmoinin/MGPT", - "avatar": "https://avatars.githubusercontent.com/u/42773394?v=4", - "description": "Modified gravity perturbation theory code", + "uid": "github/secastel/phaser", + "url": "https://github.com/secastel/phaser", + "rel": "/software/repository/github/secastel/phaser", + "avatar": "https://avatars.githubusercontent.com/u/9827367?v=4", + "description": "phasing and Allele Specific Expression from RNA-seq", "topics": [] }, { - "uid": "github/nivha/three_body_integration", - "url": "https://github.com/nivha/three_body_integration", - "rel": "/software/repository/github/nivha/three_body_integration", - "avatar": "https://avatars.githubusercontent.com/u/7469704?v=4", + "uid": "github/tornede/py_experimenter", + "url": "https://github.com/tornede/py_experimenter", + "rel": "/software/repository/github/tornede/py_experimenter", + "avatar": "https://avatars.githubusercontent.com/u/47322192?v=4", + "description": "The PyExperimenter is a tool for the automatic execution of experiments, e.g. for machine learning (ML), capturing corresponding results in a unified manner in a database. ", + "topics": [ + "database", + "executor", + "experiments", + "python" + ] + }, + { + "uid": "github/rossjturner/RAiSERed", + "url": "https://github.com/rossjturner/RAiSERed", + "rel": "/software/repository/github/rossjturner/RAiSERed", + "avatar": "https://avatars.githubusercontent.com/u/51308689?v=4", "description": null, "topics": [] }, { - "uid": "github/devries/analytic_infall", - "url": "https://github.com/devries/analytic_infall", - "rel": "/software/repository/github/devries/analytic_infall", - "avatar": "https://avatars.githubusercontent.com/u/1096938?v=4", - "description": "Analytic 1-D radiative transfer model of blue-asymmetric spectral line profiles from infalling molecular clouds. The model is presented in the paper, \"Molecular Line Profile Fitting with Analytic Radiative Transfer Models\" by De Vries & Myers (2005).", + "uid": "github/snakemake/snakemake", + "url": "https://github.com/snakemake/snakemake", + "rel": "/software/repository/github/snakemake/snakemake", + "avatar": "https://avatars1.githubusercontent.com/u/33450111?v=4", + "description": "This is the development home of the workflow management system Snakemake. For general information, see", "topics": [ - "radiative-transfer", - "c", - "star-formation", - "interstellar-medium" + "snakemake", + "reproducibility", + "workflow-management" ] }, { - "uid": "github/icrar/daliuge", - "url": "https://github.com/ICRAR/daliuge", - "rel": "/software/repository/github/icrar/daliuge", - "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", - "description": "The DALiuGE Execution Engine", + "uid": "github/grzeimann/Diagnose", + "url": "https://github.com/grzeimann/Diagnose", + "rel": "/software/repository/github/grzeimann/Diagnose", + "avatar": "https://avatars.githubusercontent.com/u/18533172?v=4", + "description": null, "topics": [] }, { - "uid": "github/spm/spm", - "url": "https://github.com/spm/spm", - "rel": "/software/repository/github/spm/spm", - "avatar": "https://avatars.githubusercontent.com/u/14014701?v=4", - "description": "SPM (Statistical Parametric Mapping) - Development Version", + "uid": "github/barbagroup/geoclaw-landspill", + "url": "https://github.com/barbagroup/geoclaw-landspill", + "rel": "/software/repository/github/barbagroup/geoclaw-landspill", + "avatar": "https://avatars.githubusercontent.com/u/6503785?v=4", + "description": "An oil land-spill and overland flow simulator for pipeline rupture events", "topics": [ - "matlab", - "neuroscience", - "neuroimaging", - "spm", - "eeg", - "fmri", - "meg", - "pet", - "spect", - "mapping", - "parametric", - "statistical", - "opm", - "nifti", - "brain", - "dcm", - "vbm" + "geoclaw", + "overland-flow", + "pipeline", + "shallow-water-equations", + "pipeline-ruptures", + "land-spill" ] }, { - "uid": "github/user29A/fastrometry", - "url": "https://github.com/user29A/fastrometry", - "rel": "/software/repository/github/user29A/fastrometry", - "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", - "description": "Fast Automatic World Coordinate Solution Solver. See the github Wiki link below for more info.", + "uid": "github/vidakris/flatwrm", + "url": "https://github.com/vidakris/flatwrm", + "rel": "/software/repository/github/vidakris/flatwrm", + "avatar": "https://avatars.githubusercontent.com/u/37143945?v=4", + "description": "Python-based machine learning code for detecting and analyzing flares", + "topics": [] + }, + { + "uid": "github/jmschrei/pomegranate", + "url": "https://github.com/jmschrei/pomegranate", + "rel": "/software/repository/github/jmschrei/pomegranate", + "avatar": "https://avatars2.githubusercontent.com/u/3916816?v=4", + "description": "Fast, flexible and easy to use probabilistic modelling in Python.", "topics": [ - "world-coordinate-solution", - "fits", - "fits-image", - "wcs" + "python", + "machine-learning", + "probabilistic-graphical-models", + "cython", + "parallel" ] }, { - "uid": "github/user29A/CCDLAB", - "url": "https://github.com/user29A/CCDLAB", - "rel": "/software/repository/github/user29A/CCDLAB", - "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", - "description": "FITS image interaction, world coordinate solving, point source extraction, photometry, etc. See the github Wiki link below for more info. If you require CCDLAB for UVIT, please ensure you have the UVIT Calibration Database which you can find at the CCDLAB Wiki link below.", + "uid": "github/SHF-NAILResearchGroup/HINA", + "url": "https://github.com/SHF-NAILResearchGroup/HINA", + "rel": "/software/repository/github/SHF-NAILResearchGroup/HINA", + "avatar": "https://avatars.githubusercontent.com/u/199019566?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/philippbaumeister/ExoMDN", + "url": "https://github.com/philippbaumeister/ExoMDN", + "rel": "/software/repository/github/philippbaumeister/ExoMDN", + "avatar": "https://avatars.githubusercontent.com/u/48733466?v=4", + "description": "Rapid characterization of exoplanet interiors with Mixture Density Networks", "topics": [ - "image-processing", - "fits", - "world-coordinates", - "fits-image", - "fits-files", - "fits-bintables", - "fits-image-sets", - "wcs-solver" + "deep-learning", + "exoplanet-classification", + "exoplanets", + "machine-learning", + "mixture-density-networks", + "planetary-science", + "python" ] }, { - "uid": "github/user29A/JPFITS", - "url": "https://github.com/user29A/JPFITS", - "rel": "/software/repository/github/user29A/JPFITS", - "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", - "description": "FITS File interaction written in Visual Studio C# .Net, compatible across all .Net platforms. JPFITS is not based on any other implementations and is written from the ground-up, consistent with the FITS standard, designed to interact with FITS files as object-oriented structures. See the github Wiki link below for more info.", + "uid": "github/cwentland0/perform", + "url": "https://github.com/cwentland0/perform", + "rel": "/software/repository/github/cwentland0/perform", + "avatar": "https://avatars.githubusercontent.com/u/33126235?v=4", + "description": "One-dimensional unsteady compressible reacting flow simulation framework, designed for simple prototyping and testing of novel reduced-order model methods.", "topics": [ - "fits", - "fits-files", - "fits-image", - "fits-visualization", - "world-coordinates", - "world-coordinate-solution", - "point-source-extraction", - "bin-tables", - "fits-image-sets", - "astronomy", - "fitsharp", - "fitsio", - "fits-bintables" + "reduced-order-modeling", + "reacting-flow-simulations" ] }, { - "uid": "github/korcsmarosgroup/CytokineLink", - "url": "https://github.com/korcsmarosgroup/CytokineLink", - "rel": "/software/repository/github/korcsmarosgroup/CytokineLink", - "avatar": "https://avatars.githubusercontent.com/u/54137652?v=4", - "description": "CytokineLink: a map of cytokine communication for inflammatory and infectious diseases", + "uid": "github/clauswilke/PeptideBuilder", + "url": "https://github.com/clauswilke/PeptideBuilder", + "rel": "/software/repository/github/clauswilke/PeptideBuilder", + "avatar": "https://avatars.githubusercontent.com/u/4210929?v=4", + "description": "A simple Python library to generate model peptides", "topics": [] }, { - "uid": "github/korcsmarosgroup/TFlink", - "url": "https://github.com/korcsmarosgroup/TFlink", - "rel": "/software/repository/github/korcsmarosgroup/TFlink", - "avatar": "https://avatars.githubusercontent.com/u/54137652?v=4", - "description": "Repository for the TFlink.net website.", + "uid": "github/PabloVD/HAYASHI", + "url": "https://github.com/PabloVD/HAYASHI", + "rel": "/software/repository/github/PabloVD/HAYASHI", + "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", + "description": "Python library for 21 cm forest computations.", "topics": [] }, { - "uid": "github/uedaLabR/nanoDoc", - "url": "https://github.com/uedaLabR/nanoDoc", - "rel": "/software/repository/github/uedaLabR/nanoDoc", - "avatar": "https://avatars.githubusercontent.com/u/70622849?v=4", - "description": "RNA modification detection using Nanopore raw reads with Deep One Class classification", + "uid": "github/PabloVD/CosmoGraphNet", + "url": "https://github.com/PabloVD/CosmoGraphNet", + "rel": "/software/repository/github/PabloVD/CosmoGraphNet", + "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", + "description": "Graph Neural Networks to predict the cosmological parameters or the galaxy power spectrum from galaxy catalogs.", "topics": [] }, { - "uid": "github/samaygarg/fuelcell", - "url": "https://github.com/samaygarg/fuelcell", - "rel": "/software/repository/github/samaygarg/fuelcell", - "avatar": "https://avatars.githubusercontent.com/u/60327888?v=4", - "description": "Electrochemical data analysis package", + "uid": "github/PabloVD/21cmDeepLearning", + "url": "https://github.com/PabloVD/21cmDeepLearning", + "rel": "/software/repository/github/PabloVD/21cmDeepLearning", + "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", + "description": "Python codes to extract the matter density field from a 21 cm map.", "topics": [] }, { - "uid": "github/roban/CosmoloPy", - "url": "https://github.com/roban/CosmoloPy", - "rel": "/software/repository/github/roban/CosmoloPy", - "avatar": "https://avatars.githubusercontent.com/u/113354?v=4", - "description": "a basic numpy/scipy-based cosmology package for python", - "topics": [] + "uid": "github/PabloVD/HaloGraphNet", + "url": "https://github.com/PabloVD/HaloGraphNet", + "rel": "/software/repository/github/PabloVD/HaloGraphNet", + "avatar": "https://avatars.githubusercontent.com/u/55508726?v=4", + "description": "Predict halo masses from simulations via graph neural networks", + "topics": [ + "machine-learning", + "deep-learning", + "graph-neural-networks" + ] }, { - "uid": "github/danielenricocahall/elephas", - "url": "https://github.com/danielenricocahall/elephas", - "rel": "/software/repository/github/danielenricocahall/elephas", - "avatar": "https://avatars.githubusercontent.com/u/33044223?v=4", - "description": "Distributed Deep learning with Keras & Spark", - "topics": [] + "uid": "github/Substra/substra", + "url": "https://github.com/Substra/substra", + "rel": "/software/repository/github/Substra/substra", + "avatar": "https://avatars.githubusercontent.com/u/84009910?v=4", + "description": "Low-level Python library used to interact with a Substra network", + "topics": [ + "federated-learning", + "federated-learning-framework" + ] }, { - "uid": "github/andrew-saydjari/CloudCovErr.jl", - "url": "https://github.com/andrew-saydjari/CloudCovErr.jl", - "rel": "/software/repository/github/andrew-saydjari/CloudCovErr.jl", - "avatar": "https://avatars.githubusercontent.com/u/40186037?v=4", - "description": "Pipeline for debiasing and improving error bar estimates for photometry on top of structured/filamentary background.", + "uid": "github/nialov/fractopo", + "url": "https://github.com/nialov/fractopo", + "rel": "/software/repository/github/nialov/fractopo", + "avatar": "https://avatars.githubusercontent.com/u/47318483?v=4", + "description": "fractopo is a Python package with tools for validating and analyzing lineament and fracture trace maps", "topics": [ - "julia" + "analysis", + "fracture", + "geology", + "topology", + "geometry", + "spatial-analysis", + "fractopo", + "python" ] }, { - "uid": "github/JakobBD/pounce", - "url": "https://github.com/JakobBD/pounce", - "rel": "/software/repository/github/JakobBD/pounce", - "avatar": "https://avatars.githubusercontent.com/u/44020564?v=4", - "description": null, + "uid": "github/MIT-STARLab/deconfuser", + "url": "https://github.com/MIT-STARLab/deconfuser", + "rel": "/software/repository/github/MIT-STARLab/deconfuser", + "avatar": "https://avatars.githubusercontent.com/u/61555529?v=4", + "description": "Fast orbit fitting to directly imaged multi-planetary systems", "topics": [] }, { - "uid": "github/hanyk/BayeSED3", - "url": "https://github.com/hanyk/BayeSED3", - "rel": "/software/repository/github/hanyk/BayeSED3", - "avatar": "https://avatars.githubusercontent.com/u/7869600?v=4", - "description": "A code for Bayesian SED synthesis and analysis of galaxies and AGNs", + "uid": "github/DTsuna/binary_precursor", + "url": "https://github.com/DTsuna/binary_precursor", + "rel": "/software/repository/github/DTsuna/binary_precursor", + "avatar": "https://avatars.githubusercontent.com/u/20248820?v=4", + "description": "Light curve model of supernova precursors powered by compact object companions", "topics": [] }, { - "uid": "github/andizq/sf3dmodels", - "url": "https://github.com/andizq/sf3dmodels", - "rel": "/software/repository/github/andizq/sf3dmodels", - "avatar": "https://avatars.githubusercontent.com/u/33854784?v=4", - "description": "sf3dmodels: star-forming regions 3D modelling package in Python :partly_sunny:", + "uid": "github/DTsuna/CHIPS", + "url": "https://github.com/DTsuna/CHIPS", + "rel": "/software/repository/github/DTsuna/CHIPS", + "avatar": "https://avatars.githubusercontent.com/u/20248820?v=4", + "description": "Open source code to unveil the Complete History of Interaction-Powered Supernovae", "topics": [] }, { - "uid": "github/nkhorshid/simab", - "url": "https://github.com/nkhorshid/SimAb", - "rel": "/software/repository/github/nkhorshid/simab", - "avatar": "https://avatars.githubusercontent.com/u/43376977?v=4", - "description": "Planet formation model", - "topics": [] + "uid": "github/sanger-pathogens/Roary", + "url": "https://github.com/sanger-pathogens/Roary", + "rel": "/software/repository/github/sanger-pathogens/Roary", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Rapid large-scale prokaryote pan genome analysis", + "topics": [ + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" + ] }, { - "uid": "github/RelNucAs/bns_nurates", - "url": "https://github.com/RelNucAs/bns_nurates", - "rel": "/software/repository/github/RelNucAs/bns_nurates", - "avatar": "https://avatars.githubusercontent.com/u/108818779?v=4", - "description": null, - "topics": [] + "uid": "github/sanger-pathogens/ariba", + "url": "https://github.com/sanger-pathogens/ariba", + "rel": "/software/repository/github/sanger-pathogens/ariba", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Antimicrobial Resistance Identification By Assembly", + "topics": [ + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" + ] }, { - "uid": "github/nickhand/pyRSD", - "url": "https://github.com/nickhand/pyRSD", - "rel": "/software/repository/github/nickhand/pyRSD", - "avatar": "https://avatars.githubusercontent.com/u/2262496?v=4", - "description": "Accurate predictions for the clustering of galaxies in redshift-space in Python", + "uid": "github/sanger-pathogens/assembly-stats", + "url": "https://github.com/sanger-pathogens/assembly-stats", + "rel": "/software/repository/github/sanger-pathogens/assembly-stats", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Get assembly statistics from FASTA and FASTQ files", "topics": [ - "astrophysics", - "galaxies", - "cosmology", - "large-scale-structure", - "python", - "c-plus-plus", - "power-spectrum" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/PIK-LPJmL/lpjmlkit", - "url": "https://github.com/PIK-LPJmL/lpjmlkit", - "rel": "/software/repository/github/PIK-LPJmL/lpjmlkit", - "avatar": "https://avatars.githubusercontent.com/u/39558205?v=4", - "description": "A collection of basic functions to facilitate the work with the DGVM LPJmL hosted at the Potsdam Institute for Climate Impact Research. It provides functions for running LPJmL, as well as reading, processing and writing model-related data such as inputs and outputs or configuration files.", + "uid": "github/sanger-pathogens/gubbins", + "url": "https://github.com/nickjcroucher/gubbins", + "rel": "/software/repository/github/sanger-pathogens/gubbins", + "avatar": "https://avatars.githubusercontent.com/u/16579395?v=4", + "description": "Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins", "topics": [ - "cran", - "r", - "r-package" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/vrodgom/statmorph", - "url": "https://github.com/vrodgom/statmorph", - "rel": "/software/repository/github/vrodgom/statmorph", - "avatar": "https://avatars.githubusercontent.com/u/10121557?v=4", - "description": "Python code for calculating non-parametric morphological diagnostics of galaxy images.", + "uid": "github/sanger-pathogens/Fastaq", + "url": "https://github.com/sanger-pathogens/Fastaq", + "rel": "/software/repository/github/sanger-pathogens/Fastaq", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Python3 scripts to manipulate FASTA and FASTQ files", "topics": [ - "astronomy", - "galaxies", - "galaxy-morphology", - "non-parametric" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/phillippro/pexo", - "url": "https://github.com/phillippro/pexo", - "rel": "/software/repository/github/phillippro/pexo", - "avatar": "https://avatars.githubusercontent.com/u/3751474?v=4", - "description": "a global modeling framework for ns timing, \u03bcas astrometry, and \u03bcm/s radial velocities", - "topics": [] + "uid": "github/sanger-pathogens/Artemis", + "url": "https://github.com/sanger-pathogens/Artemis", + "rel": "/software/repository/github/sanger-pathogens/Artemis", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Artemis is a free genome viewer and annotation tool that allows visualization of sequence features and the results of analyses within the context of the sequence, and its six-frame translation", + "topics": [ + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" + ] }, { - "uid": "github/phillippro/agatha", - "url": "https://github.com/phillippro/agatha", - "rel": "/software/repository/github/phillippro/agatha", - "avatar": "https://avatars.githubusercontent.com/u/3751474?v=4", - "description": "Disentangling period signals from correlated noise in a periodogram framework", + "uid": "github/sanger-pathogens/snp-sites", + "url": "https://github.com/sanger-pathogens/snp-sites", + "rel": "/software/repository/github/sanger-pathogens/snp-sites", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Finds SNP sites from a multi-FASTA alignment file", "topics": [ - "periodogram", - "time-series", - "periodicity", - "data-analysis", - "data-science" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/dtamayo/reboundx", - "url": "https://github.com/dtamayo/reboundx", - "rel": "/software/repository/github/dtamayo/reboundx", - "avatar": "https://avatars.githubusercontent.com/u/3408023?v=4", - "description": "A library for adding additional forces to the REBOUND N-body integration package", + "uid": "github/sanger-pathogens/pymummer", + "url": "https://github.com/sanger-pathogens/pymummer", + "rel": "/software/repository/github/sanger-pathogens/pymummer", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Python3 module for running MUMmer and reading the output", "topics": [] }, { - "uid": "github/stan-dev/stan", - "url": "https://github.com/stan-dev/stan", - "rel": "/software/repository/github/stan-dev/stan", - "avatar": "https://avatars2.githubusercontent.com/u/3374820?v=4", - "description": "Stan development repository. The master branch contains the current release. The develop branch contains the latest stable development. See the Developer Process Wiki for details. ", + "uid": "github/sanger-pathogens/iva", + "url": "https://github.com/sanger-pathogens/iva", + "rel": "/software/repository/github/sanger-pathogens/iva", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "de novo virus assembler of Illumina paired reads", "topics": [ - "stan", - "bayesian-inference", - "bayesian", - "bayesian-methods", - "bayesian-statistics", - "bayesian-data-analysis" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/benallard/galileo", - "url": "https://github.com/benallard/galileo", - "rel": "/software/repository/github/benallard/galileo", - "avatar": "https://avatars.githubusercontent.com/u/178188?v=4", - "description": "Utility to securely synchronize a Fitbit device with the Fitbit web service", + "uid": "github/sanger-pathogens/circlator", + "url": "https://github.com/sanger-pathogens/circlator", + "rel": "/software/repository/github/sanger-pathogens/circlator", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "Circlator is a tool to circularize genome assemblies. The input is a genome assembly in FASTA format and corrected PacBio or nanopore reads in FASTA or FASTQ format. Circlator will attempt to identify each circular sequence and output a linearised version of it. It does this by assembling all reads that map to contig ends and comparing the resulting contigs with the input assembly.", "topics": [ - "python", - "fitbit", - "synchronization" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/dspelaez/extended-wdm", - "url": "https://github.com/dspelaez/extended-wdm", - "rel": "/software/repository/github/dspelaez/extended-wdm", - "avatar": "https://avatars.githubusercontent.com/u/6423179?v=4", - "description": "Python toolkit for estimating directional wave spectra of ocean waves based on wavelet transform", + "uid": "github/sanger-pathogens/Bio-Tradis", + "url": "https://github.com/sanger-pathogens/Bio-Tradis", + "rel": "/software/repository/github/sanger-pathogens/Bio-Tradis", + "avatar": "https://avatars.githubusercontent.com/u/130803?v=4", + "description": "A set of tools to analyse the output from TraDIS analyses", "topics": [ - "spotter", - "wavelets", - "waves", - "wdm", - "adcps", - "directional-spectrum", - "wavestaffs" + "genomics", + "sequencing", + "next-generation-sequencing", + "research", + "bioinformatics", + "bioinformatics-pipeline", + "global-health", + "infectious-diseases", + "pathogen" ] }, { - "uid": "github/edbiomedai/scmorph", - "url": "https://github.com/edbiomedai/scmorph", - "rel": "/software/repository/github/edbiomedai/scmorph", - "avatar": "https://avatars.githubusercontent.com/u/109510523?v=4", - "description": "Single-cell morphological analysis", + "uid": "github/automl/amltk", + "url": "https://github.com/automl/amltk", + "rel": "/software/repository/github/automl/amltk", + "avatar": "https://avatars.githubusercontent.com/u/6469053?v=4", + "description": "A build-it-yourself AutoML Framework", + "topics": [] + }, + { + "uid": "github/prajwel/curvit", + "url": "https://github.com/prajwel/curvit", + "rel": "/software/repository/github/prajwel/curvit", + "avatar": "https://avatars.githubusercontent.com/u/1685962?v=4", + "description": "Create light curves from UVIT data.", "topics": [ - "high-content", - "morphological-profiling", - "single-cell" + "astronomy", + "uvit-data", + "ultraviolet", + "variability", + "python", + "science", + "lightcurves", + "astrosat", + "uvit", + "light-curves", + "instrument-coordinate" ] }, { - "uid": "github/ouyang-lab/PRAS", - "url": "https://github.com/ouyang-lab/PRAS", - "rel": "/software/repository/github/ouyang-lab/PRAS", - "avatar": "https://avatars2.githubusercontent.com/u/44652339?v=4", - "description": "PRAS: predicting functional targets of RNA binding proteins based on CLIP-seq peaks", + "uid": "github/yyZhang14/dbEssLnc", + "url": "https://github.com/yyZhang14/dbEssLnc", + "rel": "/software/repository/github/yyZhang14/dbEssLnc", + "avatar": "https://avatars.githubusercontent.com/u/86227741?v=4", + "description": "a Vue.js project", "topics": [] }, { - "uid": "github/egstrom/cluster-in-a-box", - "url": "https://github.com/egstrom/cluster-in-a-box", - "rel": "/software/repository/github/egstrom/cluster-in-a-box", - "avatar": "https://avatars.githubusercontent.com/u/8138808?v=4", - "description": "Statistical model of protostellar clusters", - "topics": [] + "uid": "github/virgesmith/neworder", + "url": "https://github.com/virgesmith/neworder", + "rel": "/software/repository/github/virgesmith/neworder", + "avatar": "https://avatars.githubusercontent.com/u/19323577?v=4", + "description": "A dynamic microsimulation framework for python", + "topics": [ + "python3", + "microsimulation", + "monte-carlo", + "mpi", + "cplusplus-17", + "pybind11", + "numpy", + "pandas", + "markov-chain" + ] }, { - "uid": "github/Smith42/pix2prof", - "url": "https://github.com/Smith42/pix2prof", - "rel": "/software/repository/github/Smith42/pix2prof", - "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", - "description": "Pix2Prof: extracting sequential galaxy data with a language model", + "uid": "github/cschreib/egg", + "url": "https://github.com/cschreib/egg", + "rel": "/software/repository/github/cschreib/egg", + "avatar": "https://avatars.githubusercontent.com/u/2236577?v=4", + "description": "Tool to generate fake galaxy catalogs with realistic positions, morphologies and fluxes from the far-ultraviolet to the far-infrared.", "topics": [ - "galaxies", - "machine-learning", + "tool", "astronomy", - "natural-language-processing" + "astrophysics", + "catalog", + "mock" + ] + }, + { + "uid": "github/SouthGreenPlatform/PyRice", + "url": "https://github.com/SouthGreenPlatform/PyRice", + "rel": "/software/repository/github/SouthGreenPlatform/PyRice", + "avatar": "https://avatars.githubusercontent.com/u/6577134?v=4", + "description": "PyRice is an API to access some Rice public databases at the same time with consistent output. PyRice design is modular and implements a smart query system which fits the computing resources to optimize the query speed.", + "topics": [ + "rice", + "bioinformatics-analysis" ] }, { - "uid": "github/Smith42/astroPT", - "url": "https://github.com/Smith42/astroPT", - "rel": "/software/repository/github/Smith42/astroPT", - "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", - "description": "Transformer for galaxy images (and general astronomy)", + "uid": "github/tibordome/cosmic_profiles", + "url": "https://github.com/tibordome/cosmic_profiles", + "rel": "/software/repository/github/tibordome/cosmic_profiles", + "avatar": "https://avatars.githubusercontent.com/u/64734836?v=4", + "description": "Implements 3D point cloud algorithms for estimation and fitting of shape and density profiles", "topics": [ "astronomy", - "transformer", - "large-observation-model" + "cosmological-simulations", + "point-cloud" ] }, { - "uid": "github/Smith42/astroddpm", - "url": "https://github.com/Smith42/astroddpm", - "rel": "/software/repository/github/Smith42/astroddpm", - "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", - "description": "A denoising diffusion probabilistic model synthesises galaxies that are qualitatively and physically indistinguishable from the real thing.", + "uid": "github/nikhilroxtomar/FANet", + "url": "https://github.com/nikhilroxtomar/FANet", + "rel": "/software/repository/github/nikhilroxtomar/FANet", + "avatar": "https://avatars.githubusercontent.com/u/17056306?v=4", + "description": "FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation [IEEE Transactions on Neural Networks and Learning Systems]", "topics": [ + "semantic-segmentation", + "deep-learning", + "computer-vision", "machine-learning", - "astronomy", - "galaxies" + "unet", + "pytorch" ] }, { - "uid": "github/Smith42/XDF-GAN", - "url": "https://github.com/Smith42/XDF-GAN", - "rel": "/software/repository/github/Smith42/XDF-GAN", - "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", - "description": "A GAN for the generation of mock astronomical surveys", + "uid": "github/adamantine-sim/adamantine", + "url": "https://github.com/adamantine-sim/adamantine", + "rel": "/software/repository/github/adamantine-sim/adamantine", + "avatar": "https://avatars.githubusercontent.com/u/82662955?v=4", + "description": "Software to simulate heat transfer for additive manufacturing", "topics": [ - "gan", - "astronomy", - "machine-learning", - "deep-learning" + "3d-printing", + "heat-transfer", + "simulation" ] }, { - "uid": "github/cmzmasek/forester", - "url": "https://github.com/cmzmasek/forester", - "rel": "/software/repository/github/cmzmasek/forester", - "avatar": "https://avatars.githubusercontent.com/u/82889?v=4", - "description": "forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research", + "uid": "github/kadyb/rgugik", + "url": "https://github.com/kadyb/rgugik", + "rel": "/software/repository/github/kadyb/rgugik", + "avatar": "https://avatars.githubusercontent.com/u/35004826?v=4", + "description": "Download datasets from Polish Head Office of Geodesy and Cartography", "topics": [ - "evolution", - "java", - "ruby", - "genomics", - "biology", - "computational-biology", - "phylogenetics", - "visualization", - "phylogenetic-trees" + "geodesy", + "cartography", + "gis", + "open-data", + "poland", + "r" ] }, { - "uid": "github/arviz-devs/preliz", - "url": "https://github.com/arviz-devs/preliz", - "rel": "/software/repository/github/arviz-devs/preliz", - "avatar": "https://avatars.githubusercontent.com/u/13554846?v=4", - "description": "Tools to help you pick a prior", - "topics": [] - }, - { - "uid": "github/arviz-devs/arviz", - "url": "https://github.com/arviz-devs/arviz", - "rel": "/software/repository/github/arviz-devs/arviz", - "avatar": "https://avatars2.githubusercontent.com/u/13554846?v=4", - "description": "Exploratory analysis of Bayesian models with Python", + "uid": "github/puregome/notebooks", + "url": "https://github.com/puregome/notebooks", + "rel": "/software/repository/github/puregome/notebooks", + "avatar": "https://avatars1.githubusercontent.com/u/63842753?v=4", + "description": "Notebooks of the PuReGoMe Project of the Netherlands eScience Center and Utrecht University.", "topics": [] }, { - "uid": "github/Gabaldonlab/jloh", - "url": "https://github.com/Gabaldonlab/jloh", - "rel": "/software/repository/github/Gabaldonlab/jloh", - "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", - "description": "A tool to extract LOH blocks from VCF, BAM and FASTA data", + "uid": "github/thraraujo/pysymmpol", + "url": "https://github.com/thraraujo/pysymmpol", + "rel": "/software/repository/github/thraraujo/pysymmpol", + "avatar": "https://avatars.githubusercontent.com/u/74145572?v=4", + "description": "A Python package for calculating and performing basic manipulations on symmetric polynomials.", "topics": [ - "heterozygosity", - "bioinformatics", - "genomics" + "combinatorics", + "jupyerlab", + "physics", + "python" ] }, { - "uid": "github/Gabaldonlab/perSVade", - "url": "https://github.com/Gabaldonlab/perSVade", - "rel": "/software/repository/github/Gabaldonlab/perSVade", - "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", - "description": "perSVade: personalized Structural Variation detection", - "topics": [] - }, - { - "uid": "github/Gabaldonlab/crossmapper", - "url": "https://github.com/Gabaldonlab/crossmapper", - "rel": "/software/repository/github/Gabaldonlab/crossmapper", - "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", - "description": "Crossmapper software", - "topics": [] - }, - { - "uid": "github/Gabaldonlab/karyon", - "url": "https://github.com/Gabaldonlab/karyon", - "rel": "/software/repository/github/Gabaldonlab/karyon", - "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", - "description": "This is the Karyon Pipeline", + "uid": "github/bencebeky/spotrod", + "url": "https://github.com/bencebeky/spotrod", + "rel": "/software/repository/github/bencebeky/spotrod", + "avatar": "https://avatars.githubusercontent.com/u/6144440?v=4", + "description": "A semi-analytic model for transits of spotted stars -- C implementation and Python API", "topics": [] }, { - "uid": "github/supsi-dacd-isaac/BayesReconPy", - "url": "https://github.com/supsi-dacd-isaac/BayesReconPy", - "rel": "/software/repository/github/supsi-dacd-isaac/BayesReconPy", - "avatar": "https://avatars.githubusercontent.com/u/11190202?v=4", - "description": "Bayesian Reconciliation for Hierarchical Forecasting", + "uid": "github/kambrian/SubGen", + "url": "https://github.com/Kambrian/SubGen", + "rel": "/software/repository/github/kambrian/SubGen", + "avatar": "https://avatars.githubusercontent.com/u/7944948?v=4", + "description": "a fast subhalo sampler", "topics": [] }, { - "uid": "github/richteague/gofish", - "url": "https://github.com/richteague/gofish", - "rel": "/software/repository/github/richteague/gofish", - "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", - "description": "\ud83c\udfa3 Fish for line detections by exploiting the known velocity structure of the disk.", + "uid": "github/joannegger/plaNETic", + "url": "https://github.com/joannegger/plaNETic", + "rel": "/software/repository/github/joannegger/plaNETic", + "avatar": "https://avatars.githubusercontent.com/u/103075328?v=4", + "description": "A neural network-based Bayesian internal structure modelling framework for small exoplanets", "topics": [] }, { - "uid": "github/richteague/disksurf", - "url": "https://github.com/richteague/disksurf", - "rel": "/software/repository/github/richteague/disksurf", - "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", - "description": "Measure the molecular emission surface of protoplanetary disks. Based on Pinte et al. (2018).", + "uid": "github/AgentM-GEG/residual_feature_extraction", + "url": "https://github.com/AgentM-GEG/residual_feature_extraction", + "rel": "/software/repository/github/AgentM-GEG/residual_feature_extraction", + "avatar": "https://avatars.githubusercontent.com/u/20112557?v=4", + "description": "A pipeline that carries out feature extraction of residual substructure within the residual images produced by popular galaxy structural-fitting routines such as GALFIT, GIM2D, etc. This pipeline works on model-subtracted residual images by popular structural fitting routines (e.g., GALFIT, GIM2D, etc) to extract faint low surface brightness features by isolating flux-wise and area-wise significant contiguous pixels regions by rigourous masking routine. This routine accepts the image cubes (original image, model image, residual image) and generates several data products", "topics": [] }, { - "uid": "github/richteague/bettermoments", - "url": "https://github.com/richteague/bettermoments", - "rel": "/software/repository/github/richteague/bettermoments", - "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", - "description": "A robust way to calculate line-of-sight velocities.", + "uid": "github/renecotyfanboy/jaxspec", + "url": "https://github.com/renecotyfanboy/jaxspec", + "rel": "/software/repository/github/renecotyfanboy/jaxspec", + "avatar": "https://avatars.githubusercontent.com/u/49200287?v=4", + "description": "jaxspec is an X-ray spectra Bayesian analysis package, relying on JAX to enable just in time compilation", "topics": [] }, { - "uid": "github/richteague/eddy", - "url": "https://github.com/richteague/eddy", - "rel": "/software/repository/github/richteague/eddy", - "avatar": "https://avatars.githubusercontent.com/u/16056713?v=4", - "description": "Python tools to recover precise rotation profiles of disks.", + "uid": "github/jeffzhen/omnical", + "url": "https://github.com/jeffzhen/omnical", + "rel": "/software/repository/github/jeffzhen/omnical", + "avatar": "https://avatars.githubusercontent.com/u/7015126?v=4", + "description": "Redundant calibration code for low frequency radio interferometers, managed by Jeff Zheng", "topics": [] }, { - "uid": "github/ClapeyronThermo/GCIdentifier.jl", - "url": "https://github.com/ClapeyronThermo/GCIdentifier.jl", - "rel": "/software/repository/github/ClapeyronThermo/GCIdentifier.jl", - "avatar": "https://avatars.githubusercontent.com/u/122504744?v=4", - "description": "tools to perform group contribution (GC) identification, given the SMILES of a compound", + "uid": "github/wvanzeist/riroriro", + "url": "https://github.com/wvanzeist/riroriro", + "rel": "/software/repository/github/wvanzeist/riroriro", + "avatar": "https://avatars.githubusercontent.com/u/65263211?v=4", + "description": "A code for simulating gravitational waves and evaluating their detectability.", "topics": [ - "group-contribution", - "joback", - "smiles-strings", - "unifac" + "gravitational-waves", + "bpass" ] }, { - "uid": "github/KALMUS-Color-Toolkit/KALMUS", - "url": "https://github.com/KALMUS-Color-Toolkit/KALMUS", - "rel": "/software/repository/github/KALMUS-Color-Toolkit/KALMUS", - "avatar": "https://avatars.githubusercontent.com/u/77697488?v=4", - "description": "KALMUS Color Toolkit for color analysis and visualization in film studies.", - "topics": [ - "image-analysis", - "video-processing", - "digital-humanities", - "python3", - "pypi-package" - ] + "uid": "github/TRASAL/AMBER", + "url": "https://github.com/TRASAL/AMBER", + "rel": "/software/repository/github/TRASAL/AMBER", + "avatar": "https://avatars.githubusercontent.com/u/20970511?v=4", + "description": "A many-core transient searching pipeline, designed to search in real-time for Fast Radio Bursts.", + "topics": [] }, { - "uid": "github/jlustigy/coronagraph", - "url": "https://github.com/jlustigy/coronagraph", - "rel": "/software/repository/github/jlustigy/coronagraph", - "avatar": "https://avatars.githubusercontent.com/u/8882466?v=4", - "description": "A Python noise model for directly imaging exoplanets ", + "uid": "github/TRASAL/psrdada-python", + "url": "https://github.com/TRASAL/psrdada-python", + "rel": "/software/repository/github/TRASAL/psrdada-python", + "avatar": "https://avatars.githubusercontent.com/u/20970511?v=4", + "description": "Python bindings to the PSRDada ringbuffer implementation", "topics": [ - "exoplanets", - "coronagraph", - "spectroscopy", - "astronomy" + "astronomy", + "data", + "ringbuffer", + "psrdada", + "python", + "nlesc" ] }, { - "uid": "github/reznik-lab/MIRTH", - "url": "https://github.com/reznik-lab/MIRTH", - "rel": "/software/repository/github/reznik-lab/MIRTH", - "avatar": "https://avatars.githubusercontent.com/u/60795367?v=4", - "description": "Metabolite Imputation via Rank Transformation and Harmonization", + "uid": "github/andizq/sf3dmodels", + "url": "https://github.com/andizq/sf3dmodels", + "rel": "/software/repository/github/andizq/sf3dmodels", + "avatar": "https://avatars.githubusercontent.com/u/33854784?v=4", + "description": "sf3dmodels: star-forming regions 3D modelling package in Python :partly_sunny:", "topics": [] }, { - "uid": "github/davidpamos/MultiModes", - "url": "https://github.com/davidpamos/MultiModes", - "rel": "/software/repository/github/davidpamos/MultiModes", - "avatar": "https://avatars.githubusercontent.com/u/69325417?v=4", - "description": "An efficient tool for the analysis of pulsating stars", + "uid": "github/abrupt-climate/hyper-canny", + "url": "https://github.com/abrupt-climate/hyper-canny", + "rel": "/software/repository/github/abrupt-climate/hyper-canny", + "avatar": "https://avatars1.githubusercontent.com/u/26436945?v=4", + "description": "High dimensional Canny edge detection", "topics": [] }, { - "uid": "github/nrao/UniPOPS", - "url": "https://github.com/nrao/UniPOPS", - "rel": "/software/repository/github/nrao/UniPOPS", - "avatar": "https://avatars.githubusercontent.com/u/305020?v=4", - "description": "Archive of final NRAO UniPOPS source code distribution (version 3.5)", - "topics": [] + "uid": "github/EOSC-LOFAR/lofar-ld", + "url": "https://github.com/EOSC-LOFAR/lofar-ld", + "rel": "/software/repository/github/EOSC-LOFAR/lofar-ld", + "avatar": "https://avatars3.githubusercontent.com/u/33518451?v=4", + "description": "LOFAR Linked Data Platform", + "topics": [ + "radioastronomy", + "radio-astronomy", + "linked-data" + ] }, { - "uid": "github/esperlman/JetCurry", - "url": "https://github.com/esperlman/JetCurry", - "rel": "/software/repository/github/esperlman/JetCurry", - "avatar": "https://avatars.githubusercontent.com/u/19291620?v=4", - "description": null, - "topics": [] + "uid": "github/smillerc/CurvilinearGrids.jl", + "url": "https://github.com/smillerc/CurvilinearGrids.jl", + "rel": "/software/repository/github/smillerc/CurvilinearGrids.jl", + "avatar": "https://avatars.githubusercontent.com/u/1474554?v=4", + "description": "A Julia library for working with curvilinear grids", + "topics": [ + "cfd", + "julia", + "mesh-generation", + "pde" + ] }, { - "uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", - "url": "https://github.com/BDI-pathogens/OpenABM-Covid19-model-paper", - "rel": "/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", - "avatar": "https://avatars.githubusercontent.com/u/16707812?v=4", - "description": "Figures for the paper describing the OpenABM-Covid19 model", + "uid": "github/arnauqb/Qwind.jl", + "url": "https://github.com/arnauqb/Qwind.jl", + "rel": "/software/repository/github/arnauqb/Qwind.jl", + "avatar": "https://avatars.githubusercontent.com/u/21260922?v=4", + "description": "Computation of UV line-driven winds in AGNs", "topics": [] }, { - "uid": "github/leonidprinceton/LightweightSpaceCoronagraphSimulator", - "url": "https://github.com/leonidprinceton/LightweightSpaceCoronagraphSimulator", - "rel": "/software/repository/github/leonidprinceton/LightweightSpaceCoronagraphSimulator", - "avatar": "https://avatars.githubusercontent.com/u/35080336?v=4", - "description": "Simulating realistic high-contrast space imaging instruments in their linear regime", + "uid": "github/arnauqb/qwind", + "url": "https://github.com/arnauqb/qwind", + "rel": "/software/repository/github/arnauqb/qwind", + "avatar": "https://avatars.githubusercontent.com/u/21260922?v=4", + "description": "A non-hydrodynamical model for AGN line-drive winds.", "topics": [] }, { - "uid": "github/ctian282/DeepSSM", - "url": "https://github.com/ctian282/DeepSSM", - "rel": "/software/repository/github/ctian282/DeepSSM", - "avatar": "https://avatars.githubusercontent.com/u/11705333?v=4", - "description": "A Neural Network based emulator for GW spectrum from cosmological FOPTs", - "topics": [] + "uid": "github/nci/scores", + "url": "https://github.com/nci/scores", + "rel": "/software/repository/github/nci/scores", + "avatar": "https://avatars.githubusercontent.com/u/18274870?v=4", + "description": "Metrics for the verification, evaluation and optimisation of forecasts, predictions or models.", + "topics": [ + "dask", + "forecast-evaluation", + "forecast-verification", + "forecasting", + "model-validation", + "pandas", + "python", + "xarray", + "climate", + "oceanography", + "weather", + "verification", + "contingency-table" + ] }, { - "uid": "github/davidhoksza/traveler", - "url": "https://github.com/cusbg/traveler", - "rel": "/software/repository/github/davidhoksza/traveler", - "avatar": "https://avatars1.githubusercontent.com/u/73171224?v=4", - "description": "Template-based RNA secondary structure visualization", + "uid": "github/VChristiaens/special", + "url": "https://github.com/VChristiaens/special", + "rel": "/software/repository/github/VChristiaens/special", + "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", + "description": "Package for spectral characterization of (sub-)stellar objects", "topics": [] }, { - "uid": "github/davidhoksza/MolArt", - "url": "https://github.com/cusbg/MolArt", - "rel": "/software/repository/github/davidhoksza/MolArt", - "avatar": "https://avatars1.githubusercontent.com/u/73171224?v=4", - "description": "MOLeculAR structure annoTator", + "uid": "github/VChristiaens/vcal_sphere", + "url": "https://github.com/VChristiaens/vcal_sphere", + "rel": "/software/repository/github/VChristiaens/vcal_sphere", + "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", + "description": "Pipeline for calibration, pre-processing and post-processing of SPHERE IRDIS and IFS data, based on VIP routines..", "topics": [] }, { - "uid": "github/neuroneural/brainchop", - "url": "https://github.com/neuroneural/brainchop", - "rel": "/software/repository/github/neuroneural/brainchop", - "avatar": "https://avatars.githubusercontent.com/u/77679632?v=4", - "description": "Brainchop: In-browser 3D MRI rendering and segmentation", - "topics": [ - "deep-learning", - "3d-segmentation", - "frontend-app", - "javascript", - "neuroimaging", - "pyodide", - "tensorflowjs", - "three-js", - "medical-imaging", - "mri", - "mri-segmentation" - ] - }, - { - "uid": "github/evanhockings/QuantumACES.jl", - "url": "https://github.com/evanhockings/QuantumACES.jl", - "rel": "/software/repository/github/evanhockings/QuantumACES.jl", - "avatar": "https://avatars.githubusercontent.com/u/9377288?v=4", - "description": "Design scalable noise characterisation experiments for quantum computers", - "topics": [ - "julia", - "quantum", - "quantum-computing", - "quantum-error-correction" - ] + "uid": "github/VChristiaens/MINDS", + "url": "https://github.com/VChristiaens/MINDS", + "rel": "/software/repository/github/VChristiaens/MINDS", + "avatar": "https://avatars.githubusercontent.com/u/13889052?v=4", + "description": "MINDS pipeline for the reduction of MIRI-MRS data", + "topics": [] }, { - "uid": "github/bshoshany/OGRe", - "url": "https://github.com/bshoshany/OGRe", - "rel": "/software/repository/github/bshoshany/OGRe", - "avatar": "https://avatars.githubusercontent.com/u/61846320?v=4", - "description": "An object-oriented general relativity package for Mathematica.", + "uid": "github/lightning-project/lightning", + "url": "https://github.com/lightning-project/lightning", + "rel": "/software/repository/github/lightning-project/lightning", + "avatar": "https://avatars.githubusercontent.com/u/93259883?v=4", + "description": "Lightning: Fast data processing using GPUs on distributed platforms", "topics": [ - "tensor", - "tensors", - "general-relativity", - "differential-geometry", - "scientific-computing" + "rust", + "cuda", + "gpu", + "distributed-systems", + "cuda-kernels" ] }, { - "uid": "github/jfarek/xatlas", - "url": "https://github.com/jfarek/xatlas", - "rel": "/software/repository/github/jfarek/xatlas", - "avatar": "https://avatars.githubusercontent.com/u/20506792?v=4", - "description": "xAtlas is a fast and retrainable small variant caller that has been developed at the Baylor College of Medicine Human Genome Sequencing Center.", - "topics": [] - }, - { - "uid": "github/jfarek/alignstats", - "url": "https://github.com/jfarek/alignstats", - "rel": "/software/repository/github/jfarek/alignstats", - "avatar": "https://avatars.githubusercontent.com/u/20506792?v=4", - "description": "Comprehensive alignment, whole-genome coverage, and capture coverage statistics.", + "uid": "github/jenniferlu717/Bracken", + "url": "https://github.com/jenniferlu717/Bracken", + "rel": "/software/repository/github/jenniferlu717/Bracken", + "avatar": "https://avatars.githubusercontent.com/u/3779419?v=4", + "description": "(Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.", "topics": [] }, { - "uid": "github/etal/cnvkit", - "url": "https://github.com/etal/cnvkit", - "rel": "/software/repository/github/etal/cnvkit", - "avatar": "https://avatars.githubusercontent.com/u/52723?v=4", - "description": "a command-line toolkit and Python library for detecting copy number variants and alterations genome-wide from high-throughput sequencing.", + "uid": "github/xinyiguan/py2lispIDyOM", + "url": "https://github.com/xinyiguan/py2lispIDyOM", + "rel": "/software/repository/github/xinyiguan/py2lispIDyOM", + "avatar": "https://avatars.githubusercontent.com/u/43217135?v=4", + "description": "A Python package for IDyOM", "topics": [] }, { - "uid": "github/LiberTEM/LiberTEM", - "url": "https://github.com/LiberTEM/LiberTEM", - "rel": "/software/repository/github/LiberTEM/LiberTEM", - "avatar": "https://avatars0.githubusercontent.com/u/35299996?v=4", - "description": "Open pixelated STEM framework", + "uid": "github/blackjax-devs/blackjax", + "url": "https://github.com/blackjax-devs/blackjax", + "rel": "/software/repository/github/blackjax-devs/blackjax", + "avatar": "https://avatars.githubusercontent.com/u/75721977?v=4", + "description": "BlackJAX is a sampling library designed for ease of use, speed and modularity.", "topics": [ - "electron-microscopy", - "data-processing", - "image-processing", - "python" + "probabilistic-programming", + "bayesian-inference", + "sampling-methods", + "hamiltonian-monte-carlo" ] }, { - "uid": "github/iancze/PSOAP", - "url": "https://github.com/iancze/PSOAP", - "rel": "/software/repository/github/iancze/PSOAP", - "avatar": "https://avatars.githubusercontent.com/u/467948?v=4", - "description": "Tools for data-driven spectra models with Gaussian processes. Pronounced \"soap.\"", - "topics": [ - "astronomy", - "spectroscopy", - "radial", - "velocity", - "python", - "gaussian-processes", - "radial-velocities", - "spectra", - "exoplanet", - "orbit" - ] + "uid": "github/ankushaggarwal/pymecht", + "url": "https://github.com/ankushaggarwal/pymecht", + "rel": "/software/repository/github/ankushaggarwal/pymecht", + "avatar": "https://avatars.githubusercontent.com/u/1700130?v=4", + "description": null, + "topics": [] }, { - "uid": "github/iancze/DiskJockey", - "url": "https://github.com/iancze/DiskJockey", - "rel": "/software/repository/github/iancze/DiskJockey", - "avatar": "https://avatars.githubusercontent.com/u/467948?v=4", - "description": "Protoplanetary Disk Modeling for Dynamical Mass Derivation", + "uid": "github/JakobRoche/OCSVM-Transit-Detection", + "url": "https://github.com/JakobRoche/OCSVM-Transit-Detection", + "rel": "/software/repository/github/JakobRoche/OCSVM-Transit-Detection", + "avatar": "https://avatars.githubusercontent.com/u/175963631?v=4", + "description": "The source code for a One-Class SVM model designed to detect exoplanet transit events.", + "topics": [] + }, + { + "uid": "github/CrowdTruth/CrowdTruth", + "url": "https://github.com/CrowdTruth/CrowdTruth", + "rel": "/software/repository/github/CrowdTruth/CrowdTruth", + "avatar": "https://avatars3.githubusercontent.com/u/8793398?v=4", + "description": "Version 1.0 of the CrowdTruth Framework for crowdsourcing ground truth data, for training and evaluation of cognitive computing systems. Check out also version 2.0 at https://github.com/CrowdTruth/CrowdTruth-core. Data collected with CrowdTruth methodology: http://data.crowdtruth.org/. Our papers: http://crowdtruth.org/papers/", "topics": [ - "julia", - "radmc-3d", - "astronomy", - "astrophysics", - "radio-astronomy" + "crowdtruth-framework", + "crowdtruth-work-ow", + "quality", + "microtasks", + "javascript", + "evaluation" ] }, { - "uid": "github/kwkx/IPRP", - "url": "https://github.com/kwkx/IPRP", - "rel": "/software/repository/github/kwkx/IPRP", - "avatar": "https://avatars.githubusercontent.com/u/44075781?v=4", - "description": "The implement of IPRP and related nomograms.", - "topics": [] - }, - { - "uid": "github/aschafu/PSSH2", - "url": "https://github.com/aschafu/PSSH2", - "rel": "/software/repository/github/aschafu/PSSH2", - "avatar": "https://avatars.githubusercontent.com/u/2921478?v=4", - "description": "Scripts for generating pssh2", + "uid": "github/jonaselgammal/SIGWAY", + "url": "https://github.com/jonaselgammal/SIGWAY", + "rel": "/software/repository/github/jonaselgammal/SIGWAY", + "avatar": "https://avatars.githubusercontent.com/u/77438543?v=4", + "description": "A code to calculate SIGW for either single-field, a function of curvature perturbations or an empirical spectrum of curvature perturbations", "topics": [] }, { - "uid": "github/VALENCE-software/VALENCE", - "url": "https://github.com/VALENCE-software/VALENCE", - "rel": "/software/repository/github/VALENCE-software/VALENCE", - "avatar": "https://avatars.githubusercontent.com/u/45109653?v=4", - "description": "quantum chemistry software", + "uid": "github/jonaselgammal/GPry", + "url": "https://github.com/jonaselgammal/GPry", + "rel": "/software/repository/github/jonaselgammal/GPry", + "avatar": "https://avatars.githubusercontent.com/u/77438543?v=4", + "description": "A Package for Bayesian inference of expensive likelihoods with Gaussian Processes", "topics": [] }, { - "uid": "github/ToyotaCRDL/mahos", - "url": "https://github.com/ToyotaCRDL/mahos", - "rel": "/software/repository/github/ToyotaCRDL/mahos", - "avatar": "https://avatars.githubusercontent.com/u/91861326?v=4", - "description": "Measurement Automation Handling and Orchestration System", + "uid": "github/Via-Appia/via-appia-online-viewer", + "url": "https://github.com/Via-Appia/via-appia-online-viewer", + "rel": "/software/repository/github/Via-Appia/via-appia-online-viewer", + "avatar": "https://avatars.githubusercontent.com/u/84012063?v=4", + "description": "Via Appia viewer application", "topics": [] }, { - "uid": "github/csdms/bmi", - "url": "https://github.com/csdms/bmi", - "rel": "/software/repository/github/csdms/bmi", - "avatar": "https://avatars3.githubusercontent.com/u/6618239?v=4", - "description": "The Basic Model Interface", + "uid": "github/samirmartins/pydaq", + "url": "https://github.com/samirmartins/pydaq", + "rel": "/software/repository/github/samirmartins/pydaq", + "avatar": "https://avatars.githubusercontent.com/u/33382485?v=4", + "description": "Data Acquisition and Experimental Analysis with Python and Graphical User Interface", "topics": [ - "bmi", - "csdms", - "geosciences", - "c", - "fortran", + "national-instruments", + "nidaq", + "nidaqmx", + "pysimplegui", "python", - "cxx" + "step-response", + "arduino", + "arduino-library", + "graphical-user-interface", + "real-datasets" ] }, { - "uid": "github/dankelley/oce", - "url": "https://github.com/dankelley/oce", - "rel": "/software/repository/github/dankelley/oce", - "avatar": "https://avatars.githubusercontent.com/u/99469?v=4", - "description": "R package for oceanographic processing", + "uid": "github/TheJacksonLaboratory/drug-synergy", + "url": "https://github.com/TheJacksonLaboratory/drug-synergy", + "rel": "/software/repository/github/TheJacksonLaboratory/drug-synergy", + "avatar": "https://avatars.githubusercontent.com/u/19977120?v=4", + "description": "Drug synergy prediction tool", + "topics": [] + }, + { + "uid": "github/TheJacksonLaboratory/SvAnn", + "url": "https://github.com/TheJacksonLaboratory/SvAnna", + "rel": "/software/repository/github/TheJacksonLaboratory/SvAnn", + "avatar": "https://avatars.githubusercontent.com/u/19977120?v=4", + "description": "Efficient and accurate pathogenicity prediction for coding and regulatory structural variants in long-read genome sequencing", "topics": [ - "oceanography", - "r" + "genomics", + "long-read-sequencing", + "prioritization", + "bioinformatics", + "rare-disease" ] }, { - "uid": "github/mmann1123/xr_fresh", - "url": "https://github.com/mmann1123/xr_fresh", - "rel": "/software/repository/github/mmann1123/xr_fresh", - "avatar": "https://avatars.githubusercontent.com/u/5185364?v=4", - "description": "A faster way to raster times-series feature utopia", + "uid": "github/ColdThunder/NR-code", + "url": "https://github.com/ColdThunder/NR-code", + "rel": "/software/repository/github/ColdThunder/NR-code", + "avatar": "https://avatars.githubusercontent.com/u/3037902?v=4", + "description": "Nonlinear reconstruction code", "topics": [] }, { - "uid": "github/JSB-UCLA/scPNMF", - "url": "https://github.com/JSB-UCLA/scPNMF", - "rel": "/software/repository/github/JSB-UCLA/scPNMF", - "avatar": "https://avatars.githubusercontent.com/u/70451103?v=4", - "description": null, + "uid": "github/witseie/fpgaperm", + "url": "https://github.com/witseie/fpgaperm", + "rel": "/software/repository/github/witseie/fpgaperm", + "avatar": "https://avatars.githubusercontent.com/u/10668039?v=4", + "description": "Permutation testing for GWAS using FPGAs", "topics": [] }, { - "uid": "github/nikhilroxtomar/FANet", - "url": "https://github.com/nikhilroxtomar/FANet", - "rel": "/software/repository/github/nikhilroxtomar/FANet", - "avatar": "https://avatars.githubusercontent.com/u/17056306?v=4", - "description": "FANet: A Feedback Attention Network for Improved Biomedical Image Segmentation [IEEE Transactions on Neural Networks and Learning Systems]", - "topics": [ - "semantic-segmentation", - "deep-learning", - "computer-vision", - "machine-learning", - "unet", - "pytorch" - ] + "uid": "github/uw-comphys/shapelets", + "url": "https://github.com/uw-comphys/shapelets", + "rel": "/software/repository/github/uw-comphys/shapelets", + "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", + "description": "shapelets is a python package that implements several shapelet functions and some of their significant applications in science and astronomy.", + "topics": [] }, { - "uid": "github/hues-platform/cesar-p-core", - "url": "https://github.com/hues-platform/cesar-p-core", - "rel": "/software/repository/github/hues-platform/cesar-p-core", - "avatar": "https://avatars.githubusercontent.com/u/22130502?v=4", - "description": "CESAR-P code library", - "topics": [] + "uid": "github/uw-comphys/opencmp", + "url": "https://github.com/uw-comphys/opencmp", + "rel": "/software/repository/github/uw-comphys/opencmp", + "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", + "description": "OpenCMP is a computational multiphysics software package based on the finite element method. It is primarily intended for physicochemical processes involving significant convective flow.", + "topics": [ + "finite-element-methods", + "computational-fluid-dynamics", + "simulation", + "modeling" + ] }, { - "uid": "github/volkamerlab/opencadd", - "url": "https://github.com/volkamerlab/opencadd", - "rel": "/software/repository/github/volkamerlab/opencadd", - "avatar": "https://avatars.githubusercontent.com/u/44878588?v=4", - "description": "A Python library for structural cheminformatics", + "uid": "github/uw-comphys/openccm", + "url": "https://github.com/uw-comphys/openccm", + "rel": "/software/repository/github/uw-comphys/openccm", + "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", + "description": "OpenCCM is a CFD-based compartment modelling software package. It is primarily intended for convection dominated reactive flows which feature a weak or one-way coupling between the reactive species and the carrier fluid, i.e. the reaction does not substantially influence the fluid flow over the course of the simulation. ", "topics": [] }, { - "uid": "github/li-shaochuan/SEDIM", - "url": "https://github.com/li-shaochuan/SEDIM", - "rel": "/software/repository/github/li-shaochuan/SEDIM", - "avatar": "https://avatars.githubusercontent.com/u/52021016?v=4", - "description": null, + "uid": "github/LucindaLilley/PIRATES", + "url": "https://github.com/LucindaLilley/PIRATES", + "rel": "/software/repository/github/LucindaLilley/PIRATES", + "avatar": "https://avatars.githubusercontent.com/u/82076657?v=4", + "description": "Code for PIRATES Image Reconstruction Algorithm", "topics": [] }, { - "uid": "github/D-Crake/HEADSS", - "url": "https://github.com/D-Crake/HEADSS", - "rel": "/software/repository/github/D-Crake/HEADSS", - "avatar": "https://avatars.githubusercontent.com/u/84581147?v=4", - "description": "HiErArchical Data Splitting and Stitching Software for Non-Distributed Clustering Algorithms", - "topics": [] + "uid": "github/lammps/lammps", + "url": "https://github.com/lammps/lammps", + "rel": "/software/repository/github/lammps/lammps", + "avatar": "https://avatars.githubusercontent.com/u/5199009?v=4", + "description": "Public development project of the LAMMPS MD software package ", + "topics": [ + "molecular-dynamics", + "lammps", + "simulation" + ] }, { - "uid": "github/4DModeller/fdmr", - "url": "https://github.com/4DModeller/fdmr", - "rel": "/software/repository/github/4DModeller/fdmr", - "avatar": "https://avatars.githubusercontent.com/u/123073836?v=4", - "description": "4DModeller, Bayesian Spatio-temporal modeling in R", + "uid": "github/ZjuLiangsl/mmkp", + "url": "https://github.com/ZjuLiangsl/mmkp", + "rel": "/software/repository/github/ZjuLiangsl/mmkp", + "avatar": "https://avatars.githubusercontent.com/u/97502124?v=4", + "description": "A Mind Mapping Knowledgebase Prototyping Tool for Precision Medicine", "topics": [] }, { - "uid": "github/malonge/RagTag", - "url": "https://github.com/malonge/RagTag", - "rel": "/software/repository/github/malonge/RagTag", - "avatar": "https://avatars.githubusercontent.com/u/10554710?v=4", - "description": "Tools for fast and flexible genome assembly scaffolding and improvement", + "uid": "github/DFKI-NI/syclops", + "url": "https://github.com/DFKI-NI/syclops", + "rel": "/software/repository/github/DFKI-NI/syclops", + "avatar": "https://avatars.githubusercontent.com/u/69036303?v=4", + "description": "Syclops is a tool for creating synthetic data from 3D virtual environments with photorealistic renderings and pixel-perfect annotations.", "topics": [ - "genome-assembly", - "scaffolding", - "gap-filling" + "3d-rendering", + "annotation", + "asset-management", + "bounding-boxes", + "computer-vision", + "data-generation", + "dataset-creation", + "depth-estimation", + "instance-segmentation", + "keypoints", + "machine-learning", + "photorealistic", + "point-clouds", + "randomization", + "semantic-segmentation", + "structured-light", + "synthetic-data", + "virtual-environments" ] }, { - "uid": "github/Nic5472K/ScientificData2021_HealthGym", - "url": "https://github.com/Nic5472K/ScientificData2021_HealthGym", - "rel": "/software/repository/github/Nic5472K/ScientificData2021_HealthGym", - "avatar": "https://avatars.githubusercontent.com/u/32753860?v=4", - "description": null, + "uid": "github/jonathanHuwP/CrystalGrowthTracker", + "url": "https://github.com/jonathanHuwP/CrystalGrowthTracker", + "rel": "/software/repository/github/jonathanHuwP/CrystalGrowthTracker", + "avatar": "https://avatars.githubusercontent.com/u/63852810?v=4", + "description": "Extract face growth rate data from x-ray video of growing crystals.", "topics": [] }, { - "uid": "github/RobertHTyler/TROPF", - "url": "https://github.com/RobertHTyler/TROPF", - "rel": "/software/repository/github/RobertHTyler/TROPF", - "avatar": "https://avatars.githubusercontent.com/u/55106747?v=4", - "description": "Tidal Response Of Planetary Fluids (TROPF): a Matlab/Octave software package for calculating the tidal response of planetary fluids", + "uid": "github/eisascience/HISTA", + "url": "https://github.com/eisascience/HISTA", + "rel": "/software/repository/github/eisascience/HISTA", + "avatar": "https://avatars.githubusercontent.com/u/26265575?v=4", + "description": "Human Infertility Single-cell Testis Atlas", "topics": [] }, { - "uid": "github/tscnlab/LightLogR", - "url": "https://github.com/tscnlab/LightLogR", - "rel": "/software/repository/github/tscnlab/LightLogR", - "avatar": "https://avatars.githubusercontent.com/u/78920096?v=4", - "description": "R package for processing and analysing light logger and optical radiation dosimeter data", - "topics": [ - "dosimetry", - "light", - "rstats-package", - "time-series-analysis", - "wearable-devices", - "wearable-sensors" - ] + "uid": "github/beastraban/INSANE", + "url": "https://github.com/beastraban/INSANE", + "rel": "/software/repository/github/beastraban/INSANE", + "avatar": "https://avatars.githubusercontent.com/u/33986427?v=4", + "description": "INflationary potential Simulator and ANalysis Engine", + "topics": [] }, { - "uid": "github/SegataLab/lefse", - "url": "https://github.com/SegataLab/lefse", - "rel": "/software/repository/github/SegataLab/lefse", - "avatar": "https://avatars.githubusercontent.com/u/60979954?v=4", - "description": "determine features of organisms, clades, taxonomic units, genes", - "topics": [] + "uid": "github/EMResearch/EvoMaster", + "url": "https://github.com/EMResearch/EvoMaster", + "rel": "/software/repository/github/EMResearch/EvoMaster", + "avatar": "https://avatars2.githubusercontent.com/u/29148026?v=4", + "description": "A tool for automatically generating system-level test cases. Currently targeting REST APIs.", + "topics": [ + "testing", + "evolutionary-algorithms", + "rest", + "java", + "kotlin", + "test-case-generation", + "api-rest", + "api-testing" + ] }, { - "uid": "github/HingeAssembler/HINGE", - "url": "https://github.com/HingeAssembler/HINGE", - "rel": "/software/repository/github/HingeAssembler/HINGE", - "avatar": "https://avatars.githubusercontent.com/u/26515746?v=4", - "description": "Software accompanying \"HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution\"", + "uid": "github/navasmontilla/CAELUM", + "url": "https://github.com/navasmontilla/CAELUM", + "rel": "/software/repository/github/navasmontilla/CAELUM", + "avatar": "https://avatars.githubusercontent.com/u/45123014?v=4", + "description": "An academic high-order finite-volume solver for the compressible Euler equations and related problems", "topics": [ - "genome-assembly" + "atmospheric-modelling", + "compressible-flows", + "fluid-dynamics", + "numerical-simulation" ] }, { - "uid": "github/exosports/MARGE", - "url": "https://github.com/exosports/MARGE", - "rel": "/software/repository/github/exosports/MARGE", - "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", - "description": "Machine learning Algorithm for Radiative transfer of Generated Exoplanets", + "uid": "github/BioinformaticsPlatformWIV-ISP/PACU", + "url": "https://github.com/BioinformaticsPlatformWIV-ISP/PACU", + "rel": "/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", + "avatar": "https://avatars.githubusercontent.com/u/18479046?v=4", + "description": "Workflow for whole genome sequencing based phylogeny of Illumina and ONT R9/R10 data.", "topics": [] }, { - "uid": "github/exosports/homer", - "url": "https://github.com/exosports/HOMER", - "rel": "/software/repository/github/exosports/homer", - "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", - "description": "Helper Of My Eternal Retrievals", + "uid": "github/TeamPerie/CellDestiny", + "url": "https://github.com/TeamPerie/CellDestiny", + "rel": "/software/repository/github/TeamPerie/CellDestiny", + "avatar": "https://avatars.githubusercontent.com/u/74544908?v=4", + "description": null, "topics": [] }, { - "uid": "github/exosports/transit", - "url": "https://github.com/exosports/transit", - "rel": "/software/repository/github/exosports/transit", - "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", - "description": "Radiative-transfer code for planetary atmospheres", + "uid": "github/artic-network/fieldbioinformatics", + "url": "https://github.com/artic-network/fieldbioinformatics", + "rel": "/software/repository/github/artic-network/fieldbioinformatics", + "avatar": "https://avatars.githubusercontent.com/u/30041437?v=4", + "description": "The ARTIC field bioinformatics pipeline", "topics": [] }, { - "uid": "github/exosports/BART", - "url": "https://github.com/exosports/BART", - "rel": "/software/repository/github/exosports/BART", - "avatar": "https://avatars.githubusercontent.com/u/12954108?v=4", - "description": "Bayesian Atmospheric Radiative Transfer fitting code", + "uid": "github/artic-network/readucks", + "url": "https://github.com/artic-network/readucks", + "rel": "/software/repository/github/artic-network/readucks", + "avatar": "https://avatars.githubusercontent.com/u/30041437?v=4", + "description": "Nanopore read de-multiplexer", "topics": [] }, { - "uid": "github/dftd3/simple-dftd3", - "url": "https://github.com/dftd3/simple-dftd3", - "rel": "/software/repository/github/dftd3/simple-dftd3", - "avatar": "https://avatars.githubusercontent.com/u/104521936?v=4", - "description": "Library first implementation of the D3 dispersion correction", + "uid": "github/CExA-project/ddc", + "url": "https://github.com/CExA-project/ddc", + "rel": "/software/repository/github/CExA-project/ddc", + "avatar": "https://avatars.githubusercontent.com/u/134058568?v=4", + "description": "DDC is a discrete domain computation library.", "topics": [ - "quantum-chemistry", - "dispersion-correction", - "ase", - "computational-chemistry", - "pyscf", - "qcschema" + "modern-cpp", + "domain-decomposition", + "ddc", + "cpp", + "discretization", + "hpc", + "kokkos" ] }, { - "uid": "github/BritishGeologicalSurvey/pyvolcans", - "url": "https://github.com/BritishGeologicalSurvey/pyvolcans", - "rel": "/software/repository/github/BritishGeologicalSurvey/pyvolcans", - "avatar": "https://avatars.githubusercontent.com/u/3224218?v=4", - "description": "Python tool to identify analogue volcanoes via VOLCANS (https://doi.org/10.1007/s00445-019-1336-3)", + "uid": "github/mh-skjelvareid/synaptus", + "url": "https://github.com/mh-skjelvareid/synaptus", + "rel": "/software/repository/github/mh-skjelvareid/synaptus", + "avatar": "https://avatars.githubusercontent.com/u/16107898?v=4", + "description": "A Matlab/Octave toolbox for synthetic aperture ultrasound imaging", "topics": [] }, { - "uid": "github/devosoft/avida", - "url": "https://github.com/devosoft/avida", - "rel": "/software/repository/github/devosoft/avida", - "avatar": "https://avatars.githubusercontent.com/u/468914?v=4", - "description": null, - "topics": [ - "avida" - ] + "uid": "github/StevenGolovkine/FDApy", + "url": "https://github.com/StevenGolovkine/FDApy", + "rel": "/software/repository/github/StevenGolovkine/FDApy", + "avatar": "https://avatars.githubusercontent.com/u/22517192?v=4", + "description": "Python Package for Functional Data Analysis", + "topics": [] }, { - "uid": "github/mglodge/MANTA-Ray", - "url": "https://github.com/mglodge/MANTA-Ray", - "rel": "/software/repository/github/mglodge/MANTA-Ray", - "avatar": "https://avatars.githubusercontent.com/u/126600438?v=4", - "description": "MANTA-Ray (Modified Absorption of Non-spherical Tiny Aggregates in the RAYleigh regime) is a model used to estimate the optical properties of fractal aggregates. It correctly predicts the amount of absorption that occurs for particles in the long-wavelength limit, to within an average error of 30%.", + "uid": "github/LauraHerold/pinc", + "url": "https://github.com/LauraHerold/pinc", + "rel": "/software/repository/github/LauraHerold/pinc", + "avatar": "https://avatars.githubusercontent.com/u/28920885?v=4", + "description": "Simple simulated-annealing minimization for computing profile likelihoods in cosmology", "topics": [] }, { - "uid": "github/juzikong/photGalIMF", - "url": "https://github.com/juzikong/photGalIMF", - "rel": "/software/repository/github/juzikong/photGalIMF", - "avatar": "https://avatars.githubusercontent.com/u/20602290?v=4", - "description": "supplementary repository of the GalIMF galaxy chemical evolution code to calculate photometric luminosity of simulated galaxies", + "uid": "github/TeraTrees/TIPP", + "url": "https://github.com/TeraTrees/TIPP", + "rel": "/software/repository/github/TeraTrees/TIPP", + "avatar": "https://avatars.githubusercontent.com/u/78455348?v=4", + "description": "tool for Taxonomic Identification and Phylogenetic Profiling", "topics": [] }, { - "uid": "github/1313e/PRISM", - "url": "https://github.com/1313e/PRISM", - "rel": "/software/repository/github/1313e/PRISM", - "avatar": "https://avatars.githubusercontent.com/u/30159027?v=4", - "description": "An alternative to MCMC for rapid analysis of models", - "topics": [ - "model", - "analysis-pipeline", - "model-analysis", - "emulator", - "regression", - "python3", - "python" - ] + "uid": "github/achael/eht-imaging", + "url": "https://github.com/achael/eht-imaging", + "rel": "/software/repository/github/achael/eht-imaging", + "avatar": "https://avatars.githubusercontent.com/u/14789925?v=4", + "description": "Imaging, analysis, and simulation software for radio interferometry", + "topics": [] }, { - "uid": "github/1313e/CMasher", - "url": "https://github.com/1313e/CMasher", - "rel": "/software/repository/github/1313e/CMasher", - "avatar": "https://avatars.githubusercontent.com/u/30159027?v=4", - "description": "Scientific colormaps for making accessible, informative and 'cmashing' plots", + "uid": "github/CederGroupHub/smol", + "url": "https://github.com/CederGroupHub/smol", + "rel": "/software/repository/github/CederGroupHub/smol", + "avatar": "https://avatars.githubusercontent.com/u/34322218?v=4", + "description": "Statistical Mechanics on Lattices", "topics": [ - "python", - "colormaps", - "data-visualization", - "plotting", - "matplotlib", - "utility-functions" + "cluster-expansion", + "materials-science", + "monte-carlo", + "statistical-mechanics" ] }, { - "uid": "github/rdicosmo/parmap", - "url": "https://github.com/rdicosmo/parmap", - "rel": "/software/repository/github/rdicosmo/parmap", - "avatar": "https://avatars.githubusercontent.com/u/687807?v=4", - "description": "Parmap is a minimalistic library allowing to exploit multicore architecture for OCaml programs with minimal modifications.", + "uid": "github/CederGroupHub/sparse-lm", + "url": "https://github.com/CederGroupHub/sparse-lm", + "rel": "/software/repository/github/CederGroupHub/sparse-lm", + "avatar": "https://avatars.githubusercontent.com/u/34322218?v=4", + "description": "Sparse Linear Regression Models", "topics": [] }, { - "uid": "github/segasai/rvspecfit", - "url": "https://github.com/segasai/rvspecfit", - "rel": "/software/repository/github/segasai/rvspecfit", - "avatar": "https://avatars.githubusercontent.com/u/109513?v=4", - "description": "Radial velocity and stellar parameter fitting code for large surveys", + "uid": "github/evanhockings/QuantumACES.jl", + "url": "https://github.com/evanhockings/QuantumACES.jl", + "rel": "/software/repository/github/evanhockings/QuantumACES.jl", + "avatar": "https://avatars.githubusercontent.com/u/9377288?v=4", + "description": "Design scalable noise characterisation experiments for quantum computers", "topics": [ - "astrophysics", - "spectroscopy" + "julia", + "quantum", + "quantum-computing", + "quantum-error-correction" ] }, { - "uid": "github/segasai/q3c", - "url": "https://github.com/segasai/q3c", - "rel": "/software/repository/github/segasai/q3c", - "avatar": "https://avatars.githubusercontent.com/u/109513?v=4", - "description": "PostgreSQL extension for spatial indexing on a sphere", - "topics": [ - "postgresql", - "sphere", - "astronomy", - "nearest-neighbors", - "query", - "coordinates" + "uid": "github/XSLiuLab/Seq2Neo", + "url": "https://github.com/XSLiuLab/Seq2Neo", + "rel": "/software/repository/github/XSLiuLab/Seq2Neo", + "avatar": "https://avatars.githubusercontent.com/u/32289723?v=4", + "description": "Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction", + "topics": [] + }, + { + "uid": "github/gmbrandt/xwavecal", + "url": "https://github.com/gmbrandt/xwavecal", + "rel": "/software/repository/github/gmbrandt/xwavecal", + "avatar": "https://avatars.githubusercontent.com/u/38594712?v=4", + "description": "A library of routines for wavelength calibrating echelle spectrographs for high precision radial velocity work. A limited data-reduction pipeline is included.", + "topics": [] + }, + { + "uid": "github/gmbrandt/HTOF", + "url": "https://github.com/gmbrandt/HTOF", + "rel": "/software/repository/github/gmbrandt/HTOF", + "avatar": "https://avatars.githubusercontent.com/u/38594712?v=4", + "description": "HTOF: Code which parses the intermediate data from Hipparcos and Gaia and fits astrometric solutions to those data. Capable of computing likelyhoods and parameter errors in line with the catalog.", + "topics": [] + }, + { + "uid": "github/andersen-lab/ivar", + "url": "https://github.com/andersen-lab/ivar", + "rel": "/software/repository/github/andersen-lab/ivar", + "avatar": "https://avatars.githubusercontent.com/u/16296068?v=4", + "description": "iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.", + "topics": [ + "variant-calling", + "amplicon-sequencing" ] }, { - "uid": "github/captain-exoplanet/misttborn", - "url": "https://github.com/captain-exoplanet/misttborn", - "rel": "/software/repository/github/captain-exoplanet/misttborn", - "avatar": "https://avatars.githubusercontent.com/u/45567063?v=4", - "description": "MISTTBORN exoplanet fitting code, and various associated codes", + "uid": "github/andersen-lab/html", + "url": null, + "rel": "/software/repository/github/andersen-lab/html", + "avatar": "", + "description": "is a computational package that contains functions broadly useful for viral amplicon-based sequencing.", "topics": [] }, { - "uid": "github/Hi-COLACode/Hi-COLA", - "url": "https://github.com/Hi-COLACode/Hi-COLA", - "rel": "/software/repository/github/Hi-COLACode/Hi-COLA", - "avatar": "https://avatars.githubusercontent.com/u/125999519?v=4", - "description": "Hi-COLA simulates cosmological large-scale structure for a wide class of Horndeski theories. Built using a COLA solver forked from FML by HAWinther.", + "uid": "github/andersen-lab/Freyja", + "url": "https://github.com/andersen-lab/Freyja", + "rel": "/software/repository/github/andersen-lab/Freyja", + "avatar": "https://avatars.githubusercontent.com/u/16296068?v=4", + "description": "Depth-weighted De-Mixing ", "topics": [] }, { - "uid": "github/bxlab/metaWRAP", - "url": "https://github.com/bxlab/metaWRAP", - "rel": "/software/repository/github/bxlab/metaWRAP", - "avatar": "https://avatars.githubusercontent.com/u/2084107?v=4", - "description": "MetaWRAP - a flexible pipeline for genome-resolved metagenomic data analysis", + "uid": "github/SPARTA-dev/SPARTA", + "url": "https://github.com/SPARTA-dev/SPARTA", + "rel": "/software/repository/github/SPARTA-dev/SPARTA", + "avatar": "https://avatars.githubusercontent.com/u/63186054?v=4", + "description": null, "topics": [] }, { - "uid": "github/bxlab/bx-python", - "url": "https://github.com/bxlab/bx-python", - "rel": "/software/repository/github/bxlab/bx-python", - "avatar": "https://avatars.githubusercontent.com/u/2084107?v=4", - "description": "Tools for manipulating biological data, particularly multiple sequence alignments", + "uid": "github/Martindelosrios/ROGER", + "url": "https://github.com/Martindelosrios/ROGER", + "rel": "/software/repository/github/Martindelosrios/ROGER", + "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", + "description": null, "topics": [] }, { - "uid": "github/NCAS-CMS/cfdm", - "url": "https://github.com/NCAS-CMS/cfdm", - "rel": "/software/repository/github/NCAS-CMS/cfdm", - "avatar": "https://avatars3.githubusercontent.com/u/31280705?v=4", - "description": "A Python reference implementation of the CF data model", - "topics": [ - "cf", - "metadata", - "python", - "netcdf", - "climate", - "forecasting", - "ocean", - "atmosphere", - "atmospheric-science" - ] + "uid": "github/Martindelosrios/cosmic-kite", + "url": "https://github.com/Martindelosrios/cosmic-kite", + "rel": "/software/repository/github/Martindelosrios/cosmic-kite", + "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", + "description": null, + "topics": [] }, { - "uid": "github/legolason/PyQSOFit", - "url": "https://github.com/legolason/PyQSOFit", - "rel": "/software/repository/github/legolason/PyQSOFit", - "avatar": "https://avatars.githubusercontent.com/u/8182924?v=4", - "description": "A code to fit the spectrum of quasar", + "uid": "github/Martindelosrios/MeSsI", + "url": "https://github.com/Martindelosrios/MeSsI", + "rel": "/software/repository/github/Martindelosrios/MeSsI", + "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", + "description": null, "topics": [] }, { - "uid": "github/solerjuan/magnetar", - "url": "https://github.com/solerjuan/magnetar", - "rel": "/software/repository/github/solerjuan/magnetar", - "avatar": "https://avatars.githubusercontent.com/u/10508683?v=4", + "uid": "github/opengenomebrowser/opengenomebrowser", + "url": "https://github.com/opengenomebrowser/opengenomebrowser", + "rel": "/software/repository/github/opengenomebrowser/opengenomebrowser", + "avatar": "https://avatars.githubusercontent.com/u/75793699?v=4", "description": null, "topics": [] }, { - "uid": "github/solerjuan/astroHOG", - "url": "https://github.com/solerjuan/astroHOG", - "rel": "/software/repository/github/solerjuan/astroHOG", - "avatar": "https://avatars.githubusercontent.com/u/10508683?v=4", - "description": "Set of tools for the analysis correlations using the Histograms of Oriented Gradients", + "uid": "github/chrishales/pieflag", + "url": "https://github.com/chrishales/pieflag", + "rel": "/software/repository/github/chrishales/pieflag", + "avatar": "https://avatars.githubusercontent.com/u/8146490?v=4", + "description": "CASA task to flag bad data by drawing upon statistics from reference channels in bandpass-calibrated data", "topics": [] }, { - "uid": "github/dmey/synthia", - "url": "https://github.com/dmey/synthia", - "rel": "/software/repository/github/dmey/synthia", - "avatar": "https://avatars.githubusercontent.com/u/26348635?v=4", - "description": "\ud83d\udcc8 \ud83d\udc0d Multidimensional synthetic data generation in Python", - "topics": [ - "synthetic-data", - "copula", - "fpca", - "machine-learning", - "data-science", - "data-generation", - "xarray", - "weather", - "climate", - "finance", - "data-modelling", - "principal-component-analysis", - "dependency-analysis", - "dependency-modeling", - "statistics", - "augmentation", - "oversampling", - "data-augmentation", - "functional-data", - "data-generator" - ] + "uid": "github/weber1158/eds-classification", + "url": "https://github.com/weber1158/eds-classification", + "rel": "/software/repository/github/weber1158/eds-classification", + "avatar": "https://avatars.githubusercontent.com/u/133900499?v=4", + "description": "Functions for working with SEM-EDS data in MATLAB, including different algorithms for performing mineral classification.", + "topics": [] }, { - "uid": "github/earth-metabolome-initiative/earth_metabolome_ontology", - "url": "https://github.com/earth-metabolome-initiative/earth_metabolome_ontology", - "rel": "/software/repository/github/earth-metabolome-initiative/earth_metabolome_ontology", - "avatar": "https://avatars.githubusercontent.com/u/121333592?v=4", - "description": "The Earth Metabolome Initiative Ontology. The Earth Metabolome Initiative (EMI, https://www.earthmetabolome.org/ ) is a global effort to profile the metabolic content of all currently known species on our planet.", - "topics": [ - "metabolomics", - "ontology", - "owl-ontology", - "plants", - "rdf" - ] + "uid": "github/dcjones/quip", + "url": "https://github.com/dcjones/quip", + "rel": "/software/repository/github/dcjones/quip", + "avatar": "https://avatars.githubusercontent.com/u/210361?v=4", + "description": "Compressing next-generation sequencing data with extreme prejudice.", + "topics": [] }, { - "uid": "github/AIgnesti/PT-REX", - "url": "https://github.com/AIgnesti/PT-REX", - "rel": "/software/repository/github/AIgnesti/PT-REX", - "avatar": "https://avatars.githubusercontent.com/u/68424557?v=4", - "description": null, + "uid": "github/vallima/PRyMordial", + "url": "https://github.com/vallima/PRyMordial", + "rel": "/software/repository/github/vallima/PRyMordial", + "avatar": "https://avatars.githubusercontent.com/u/2189782?v=4", + "description": "A Python package for precise computations of BBN within and beyond the Standard Model", "topics": [] }, { - "uid": "github/mmp2/megaman", - "url": "https://github.com/mmp2/megaman", - "rel": "/software/repository/github/mmp2/megaman", - "avatar": "https://avatars.githubusercontent.com/u/5679461?v=4", - "description": "megaman: Manifold Learning for Millions of Points ", + "uid": "github/alekseyzimin/ufasta", + "url": "https://github.com/alekseyzimin/ufasta", + "rel": "/software/repository/github/alekseyzimin/ufasta", + "avatar": "https://avatars.githubusercontent.com/u/27226909?v=4", + "description": "Utility to manipulate fasta files", "topics": [] }, { - "uid": "github/pytorch/vision", - "url": "https://github.com/pytorch/vision", - "rel": "/software/repository/github/pytorch/vision", - "avatar": "https://avatars.githubusercontent.com/u/21003710?v=4", - "description": "Datasets, Transforms and Models specific to Computer Vision", + "uid": "github/jah1994/PyTorchDIA", + "url": "https://github.com/jah1994/PyTorchDIA", + "rel": "/software/repository/github/jah1994/PyTorchDIA", + "avatar": "https://avatars.githubusercontent.com/u/58561474?v=4", + "description": "PyTorchDIA is a Difference Image Analysis tool. It is built around the PyTorch machine learning framework, and uses automatic differentiation and (optional) GPU support to perform lightning fast optimisations of image models.", "topics": [ - "computer-vision", - "machine-learning" + "image-processing", + "astronomy" ] }, { - "uid": "github/ncbi/BAMscale", - "url": "https://github.com/ncbi/BAMscale", - "rel": "/software/repository/github/ncbi/BAMscale", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.", + "uid": "github/mfruzan/HaploMaker", + "url": "https://github.com/mfruzan/HaploMaker", + "rel": "/software/repository/github/mfruzan/HaploMaker", + "avatar": "https://avatars.githubusercontent.com/u/48665672?v=4", + "description": null, "topics": [] }, { - "uid": "github/ncbi/TPMCalculator", - "url": "https://github.com/ncbi/TPMCalculator", - "rel": "/software/repository/github/ncbi/TPMCalculator", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files", + "uid": "github/maserlib/ExPRES", + "url": "https://github.com/maserlib/ExPRES", + "rel": "/software/repository/github/maserlib/ExPRES", + "avatar": "https://avatars.githubusercontent.com/u/22966577?v=4", + "description": "Exoplanetary and Planetary Radio Emission Simulator", "topics": [ - "ngs", - "rna-seq", - "tpm" + "uws", + "idl", + "radio-astronomy", + "jupiter", + "padc" ] }, { - "uid": "github/ncbi/datasets", - "url": "https://github.com/ncbi/datasets", - "rel": "/software/repository/github/ncbi/datasets", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "NCBI Datasets is an experimental resource for finding and building datasets", + "uid": "github/zhongqiu1245/CCS-Net", + "url": "https://github.com/zhongqiu1245/CCS-Net", + "rel": "/software/repository/github/zhongqiu1245/CCS-Net", + "avatar": "https://avatars.githubusercontent.com/u/48090608?v=4", + "description": null, "topics": [] }, { - "uid": "github/ncbi/SRPRISM", - "url": "https://github.com/ncbi/SRPRISM", - "rel": "/software/repository/github/ncbi/SRPRISM", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "Short Read Alignment Tool", - "topics": [] + "uid": "github/xraypy/xraylarch", + "url": "https://github.com/xraypy/xraylarch", + "rel": "/software/repository/github/xraypy/xraylarch", + "avatar": "https://avatars.githubusercontent.com/u/1273713?v=4", + "description": "Larch: Applications and Python Library for Data Analysis of X-ray Absorption Spectroscopy (XAS, XANES, XAFS, EXAFS), X-ray Fluorescence (XRF) Spectroscopy and Imaging, and more.", + "topics": [ + "python", + "x-ray-absorption-fine-structure", + "x-ray-fluorescence", + "x-ray-physics", + "synchrotron" + ] }, { - "uid": "github/ncbi/ngs", - "url": "https://github.com/ncbi/ngs", - "rel": "/software/repository/github/ncbi/ngs", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "NGS Language Bindings", + "uid": "github/cieslar/Indri", + "url": "https://github.com/cieslar/Indri", + "rel": "/software/repository/github/cieslar/Indri", + "avatar": "https://avatars.githubusercontent.com/u/16241206?v=4", + "description": "The Markov chain Monte Carlo population synthesis code of single pulsars in the Milky Way", "topics": [] }, { - "uid": "github/ncbi/sra-tools", - "url": "https://github.com/ncbi/sra-tools", - "rel": "/software/repository/github/ncbi/sra-tools", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "SRA Tools", + "uid": "github/cwinpy/cwinpy", + "url": "https://github.com/cwinpy/cwinpy", + "rel": "/software/repository/github/cwinpy/cwinpy", + "avatar": "https://avatars.githubusercontent.com/u/47671702?v=4", + "description": "CW Inference in Python", "topics": [] }, { - "uid": "github/ncbi/SKESA", - "url": "https://github.com/ncbi/SKESA", - "rel": "/software/repository/github/ncbi/SKESA", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "SKESA assembler", + "uid": "github/agnesbrnb/MetIDfyR", + "url": "https://github.com/agnesbrnb/MetIDfyR", + "rel": "/software/repository/github/agnesbrnb/MetIDfyR", + "avatar": "https://avatars.githubusercontent.com/u/44233550?v=4", + "description": "MetIDfyR, an open-source and easy to use R script to predict and detect metabolites in mass spectrometry data", "topics": [] }, { - "uid": "github/ncbi/igblast", - "url": "https://github.com/ncbi/igblast", - "rel": "/software/repository/github/ncbi/igblast", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "Immunoglobulin and T cell receptor variable domain sequence analysis", + "uid": "github/bioAI-Oslo/Spikeometric", + "url": "https://github.com/bioAI-Oslo/Spikeometric", + "rel": "/software/repository/github/bioAI-Oslo/Spikeometric", + "avatar": "https://avatars.githubusercontent.com/u/84571881?v=4", + "description": "Spiking Neural Network Simulator based on Generalized Linear Models", "topics": [] }, { - "uid": "github/ncbi/vadr", - "url": "https://github.com/ncbi/vadr", - "rel": "/software/repository/github/ncbi/vadr", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation", + "uid": "github/geoffryan/afterglowpy", + "url": "https://github.com/geoffryan/afterglowpy", + "rel": "/software/repository/github/geoffryan/afterglowpy", + "avatar": "https://avatars.githubusercontent.com/u/3049235?v=4", + "description": "Python module to compute and fit GRB afterglows.", "topics": [] }, { - "uid": "github/ncbi/ncbi-vdb", - "url": "https://github.com/ncbi/ncbi-vdb", - "rel": "/software/repository/github/ncbi/ncbi-vdb", - "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", - "description": "ncbi-vdb", + "uid": "github/ppsp-team/PyNM", + "url": "https://github.com/ppsp-team/PyNM", + "rel": "/software/repository/github/ppsp-team/PyNM", + "avatar": "https://avatars.githubusercontent.com/u/65951336?v=4", + "description": "Lightweight Python implementation of Normative Modelling", "topics": [] }, { - "uid": "github/AstroAccelerateOrg/astro-accelerate", - "url": "https://github.com/AstroAccelerateOrg/astro-accelerate", - "rel": "/software/repository/github/AstroAccelerateOrg/astro-accelerate", - "avatar": "https://avatars.githubusercontent.com/u/25104377?v=4", - "description": "AstroAccelerate is a many-core accelerated software package for processing time-domain radio-astronomy data.", + "uid": "github/castro-gzlz/TESS-cont", + "url": "https://github.com/castro-gzlz/TESS-cont", + "rel": "/software/repository/github/castro-gzlz/TESS-cont", + "avatar": "https://avatars.githubusercontent.com/u/132309889?v=4", + "description": "Flux contamination analysis (TESS)", "topics": [ - "gpu", - "cuda", - "radio-astronomy" + "exoplanet-detection", + "exoplanets", + "tess", + "contamination", + "tess-photometry" ] }, { - "uid": "github/cieslar/Indri", - "url": "https://github.com/cieslar/Indri", - "rel": "/software/repository/github/cieslar/Indri", - "avatar": "https://avatars.githubusercontent.com/u/16241206?v=4", - "description": "The Markov chain Monte Carlo population synthesis code of single pulsars in the Milky Way", - "topics": [] + "uid": "github/castro-gzlz/mr-plotter", + "url": "https://github.com/castro-gzlz/mr-plotter", + "rel": "/software/repository/github/castro-gzlz/mr-plotter", + "avatar": "https://avatars.githubusercontent.com/u/132309889?v=4", + "description": "Mass-Radius diagrams with a wide range of models and relationships", + "topics": [ + "exoplanets", + "exoplanet-composition", + "exoplanet-interiors", + "exoplanet-atmospheres" + ] }, { - "uid": "github/RomainFeron/mwga-utils", - "url": "https://github.com/RomainFeron/mwga-utils", - "rel": "/software/repository/github/RomainFeron/mwga-utils", - "avatar": "https://avatars.githubusercontent.com/u/14352967?v=4", - "description": "Collection of utilities for processing Multispecies Whole Genome Alignments ", - "topics": [] + "uid": "github/jfowkes/pycutest", + "url": "https://github.com/jfowkes/pycutest", + "rel": "/software/repository/github/jfowkes/pycutest", + "avatar": "https://avatars.githubusercontent.com/u/5586192?v=4", + "description": "Python interface to CUTEst", + "topics": [ + "optimization-tools" + ] }, { - "uid": "github/AlexanderBartholomaeus/smORFer", - "url": "https://github.com/AlexanderBartholomaeus/smORFer", - "rel": "/software/repository/github/AlexanderBartholomaeus/smORFer", - "avatar": "https://avatars.githubusercontent.com/u/36157612?v=4", - "description": null, + "uid": "github/10XGenomics/bamtofastq", + "url": "https://github.com/10XGenomics/bamtofastq", + "rel": "/software/repository/github/10XGenomics/bamtofastq", + "avatar": "https://avatars.githubusercontent.com/u/9890104?v=4", + "description": "Convert 10x BAM files to the original FASTQs compatible with 10x pipelines", "topics": [] }, { - "uid": "github/R-Vessel-X/SlicerRVXLiverSegmentation", - "url": "https://github.com/R-Vessel-X/SlicerRVXLiverSegmentation", - "rel": "/software/repository/github/R-Vessel-X/SlicerRVXLiverSegmentation", - "avatar": "https://avatars.githubusercontent.com/u/86227908?v=4", - "description": "3D Slicer plugin for Liver Anatomy Annotation by R-Vessel-X", + "uid": "github/deepmedic/deepmedic", + "url": "https://github.com/deepmedic/deepmedic", + "rel": "/software/repository/github/deepmedic/deepmedic", + "avatar": "https://avatars.githubusercontent.com/u/29442582?v=4", + "description": "Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans", "topics": [ - "3d-slicer-extension" + "deep-learning", + "machine-learning", + "medical-imaging", + "neural-networks", + "convolutional-neural-networks" ] }, { - "uid": "github/davidechicco/geneExpressionFromGEO", - "url": "https://github.com/davidechicco/geneExpressionFromGEO", - "rel": "/software/repository/github/davidechicco/geneExpressionFromGEO", - "avatar": "https://avatars.githubusercontent.com/u/12862995?v=4", - "description": "geneExpressionFromGEO", - "topics": [] + "uid": "github/RTIInternational/gobbli", + "url": "https://github.com/RTIInternational/gobbli", + "rel": "/software/repository/github/RTIInternational/gobbli", + "avatar": "https://avatars.githubusercontent.com/u/10167032?v=4", + "description": "Deep learning with text doesn't have to be scary.", + "topics": [ + "docker", + "deep-learning", + "python", + "nlp" + ] }, { - "uid": "github/equipeGST/RiboDoc", - "url": "https://github.com/equipeGST/RiboDoc", - "rel": "/software/repository/github/equipeGST/RiboDoc", - "avatar": "https://avatars.githubusercontent.com/u/75135539?v=4", - "description": "Docker based tool for ribosome profiling (RiboSeq) analysis", + "uid": "github/lucydot/effmass", + "url": "https://github.com/lucydot/effmass", + "rel": "/software/repository/github/lucydot/effmass", + "avatar": "https://avatars.githubusercontent.com/u/2452935?v=4", + "description": "Calculates various definitions of effective mass from the electronic bandstructure of a semiconductor.", "topics": [] }, { - "uid": "github/andreyshabalin/TwinEQTL", - "url": "https://github.com/andreyshabalin/TwinEQTL", - "rel": "/software/repository/github/andreyshabalin/TwinEQTL", - "avatar": "https://avatars.githubusercontent.com/u/17608988?v=4", - "description": "TwinMeta: Fast and Powerful Association Analysis for eQTL and GWAS in Twin Studies", + "uid": "github/nikhil-sarin/redback", + "url": "https://github.com/nikhil-sarin/redback", + "rel": "/software/repository/github/nikhil-sarin/redback", + "avatar": "https://avatars.githubusercontent.com/u/42257246?v=4", + "description": "A Bayesian inference software package for end-to-end fitting and interpretation of electromagnetic transients", + "topics": [ + "kilonovae", + "supernovae", + "timedomainastronomy", + "astronomy", + "multi-messenger", + "tidal-disruptions", + "transients" + ] + }, + { + "uid": "github/babelomics/impuSARS", + "url": "https://github.com/babelomics/impuSARS", + "rel": "/software/repository/github/babelomics/impuSARS", + "avatar": "https://avatars.githubusercontent.com/u/6276325?v=4", + "description": "Software tool for the imputation of whole-genome SARS-CoV-2 sequences.", "topics": [] }, { - "uid": "github/mtazzari/uvplot", - "url": "https://github.com/mtazzari/uvplot", - "rel": "/software/repository/github/mtazzari/uvplot", - "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", - "description": "A simple package to make nice visibility plots and to export visibilites from MS tables", + "uid": "github/timkartar/RNAscape", + "url": "https://github.com/timkartar/RNAscape", + "rel": "/software/repository/github/timkartar/RNAscape", + "avatar": "https://avatars.githubusercontent.com/u/16060117?v=4", + "description": "Geometry faithful 2D RNA visualization", + "topics": [ + "dna", + "geometry", + "nucleic-acids", + "rna", + "structural-biology", + "visualization", + "webserver" + ] + }, + { + "uid": "github/Electrostatics/apbs", + "url": "https://github.com/Electrostatics/apbs", + "rel": "/software/repository/github/Electrostatics/apbs", + "avatar": "https://avatars.githubusercontent.com/u/6935492?v=4", + "description": "Software for biomolecular electrostatics and solvation calculations", + "topics": [ + "chemistry", + "bioinformatics", + "biophysics" + ] + }, + { + "uid": "github/exciting/excitingtools", + "url": "https://github.com/exciting/excitingtools", + "rel": "/software/repository/github/exciting/excitingtools", + "avatar": "https://avatars.githubusercontent.com/u/436341?v=4", + "description": "An exciting Workflow Tool", "topics": [] }, { - "uid": "github/mtazzari/galario", - "url": "https://github.com/mtazzari/galario", - "rel": "/software/repository/github/mtazzari/galario", - "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", - "description": "Gpu Accelerated Library for Analysing Radio Interferometer Observations", + "uid": "github/sbi-dev/sbi", + "url": "https://github.com/sbi-dev/sbi", + "rel": "/software/repository/github/sbi-dev/sbi", + "avatar": "https://avatars.githubusercontent.com/u/141135423?v=4", + "description": "Simulation-based inference toolkit", "topics": [ - "gpu-accelerated-library", - "gpu", - "astronomy", - "interferometry", - "radio", - "radio-astronomy", - "fourier-analysis" + "simulation-based-inference", + "likelihood-free-inference", + "bayesian-inference", + "parameter-estimation", + "pytorch", + "machine-learning" + ] + }, + { + "uid": "github/TrackerControl/tracker-control-android", + "url": "https://github.com/TrackerControl/tracker-control-android", + "rel": "/software/repository/github/TrackerControl/tracker-control-android", + "avatar": "https://avatars.githubusercontent.com/u/81009368?v=4", + "description": "TrackerControl: monitor and control trackers and ads.", + "topics": [ + "android", + "tracking-protection", + "privacy" ] }, { - "uid": "github/mtazzari/binary", - "url": "https://github.com/mtazzari/binary", - "rel": "/software/repository/github/mtazzari/binary", - "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", - "description": "This program computes the evolution of an accretion disc interacting with a binary system. Used in Tazzari, Lodato (2015).", + "uid": "github/PyPO-dev/PyPO", + "url": "https://github.com/PyPO-dev/PyPO", + "rel": "/software/repository/github/PyPO-dev/PyPO", + "avatar": "https://avatars.githubusercontent.com/u/133362839?v=4", + "description": "\ud83d\udce1 Open-source physical optics simulation package.", + "topics": [] + }, + { + "uid": "github/DMGW-Goethe/imripy", + "url": "https://github.com/DMGW-Goethe/imripy", + "rel": "/software/repository/github/DMGW-Goethe/imripy", + "avatar": "https://avatars.githubusercontent.com/u/93539226?v=4", + "description": "A python code able to simulate Intermediate Mass Ratio Inspirals (IMRI)", + "topics": [] + }, + { + "uid": "github/technic960183/spherimatch", + "url": "https://github.com/technic960183/spherimatch", + "rel": "/software/repository/github/technic960183/spherimatch", + "avatar": "https://avatars.githubusercontent.com/u/48866415?v=4", + "description": "A Python package for cross-matching and self-matching in spherical coordinates.", + "topics": [] + }, + { + "uid": "github/Ruiz-HCI-Lab/ggMOB", + "url": "https://github.com/Ruiz-HCI-Lab/ggMOB", + "rel": "/software/repository/github/Ruiz-HCI-Lab/ggMOB", + "avatar": "https://avatars.githubusercontent.com/u/41012125?v=4", + "description": null, "topics": [] }, { - "uid": "github/Schuch666/eva3dm", - "url": "https://github.com/Schuch666/eva3dm", - "rel": "/software/repository/github/Schuch666/eva3dm", - "avatar": "https://avatars.githubusercontent.com/u/32721340?v=4", - "description": "A package to evaluate 3d weather and air quality models", - "topics": [ - "air-quality-model", - "atmos", - "atmosphere", - "atmospheric-chemistry", - "atmospheric-modelling", - "atmospheric-models", - "atmospheric-science", - "evaluation", - "model-evaluation", - "model-evaluation-metrics", - "wrf-chem", - "air-quality-model-evaluation" - ] + "uid": "github/hveerten/katu", + "url": "https://github.com/hveerten/katu", + "rel": "/software/repository/github/hveerten/katu", + "avatar": "https://avatars.githubusercontent.com/u/7522566?v=4", + "description": null, + "topics": [] }, { - "uid": "github/twopin/CAMP", - "url": "https://github.com/twopin/CAMP", - "rel": "/software/repository/github/twopin/CAMP", - "avatar": "https://avatars.githubusercontent.com/u/22184602?v=4", - "description": "predicting peptide-protein interactions", + "uid": "github/hveerten/boxfit", + "url": "https://github.com/hveerten/boxfit", + "rel": "/software/repository/github/hveerten/boxfit", + "avatar": "https://avatars.githubusercontent.com/u/7522566?v=4", + "description": "boxfit, a gamma-ray burst afterglow light curve generator based on two-dimensional hydrodynamics simulations", "topics": [] }, { - "uid": "github/yrkhalil/SPIBACK", - "url": "https://github.com/yrkhalil/SPIBACK", - "rel": "/software/repository/github/yrkhalil/SPIBACK", - "avatar": "https://avatars.githubusercontent.com/u/126723765?v=4", - "description": "Backward-integration-based non-axisymmetric models of the Milky Way disk", - "topics": [ - "astronomy-astrophysics", - "milky-way-galaxy" - ] + "uid": "github/dnafinder/uroccomp", + "url": "https://github.com/dnafinder/uroccomp", + "rel": "/software/repository/github/dnafinder/uroccomp", + "avatar": "https://avatars.githubusercontent.com/u/37176275?v=4", + "description": "Compare two unpaired ROC curves", + "topics": [] }, { - "uid": "github/cas-bioinf/rboAnalyzer", - "url": "https://github.com/cas-bioinf/rboAnalyzer", - "rel": "/software/repository/github/cas-bioinf/rboAnalyzer", - "avatar": "https://avatars1.githubusercontent.com/u/25302416?v=4", - "description": "Tool for analysing BLAST output for ncRNA sequences", + "uid": "github/aymgal/COOLEST", + "url": "https://github.com/aymgal/COOLEST", + "rel": "/software/repository/github/aymgal/COOLEST", + "avatar": "https://avatars.githubusercontent.com/u/10706063?v=4", + "description": "Standard for strong gravitational lensing studies", "topics": [ - "rna", - "rna-structure-prediction", - "blast", - "blast-search" + "astrophysics", + "gravitational-lensing", + "lens-modeling", + "standardization" ] }, { - "uid": "github/sheydenreich/threepoint", - "url": "https://github.com/sheydenreich/threepoint", - "rel": "/software/repository/github/sheydenreich/threepoint", - "avatar": "https://avatars.githubusercontent.com/u/38494130?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/umami-hep/salt", - "url": "https://github.com/umami-hep/salt", - "rel": "/software/repository/github/umami-hep/salt", - "avatar": "https://avatars.githubusercontent.com/u/104375517?v=4", - "description": "Mirror of the Salt Gitlab project", + "uid": "github/grdspcht/ggret", + "url": "https://github.com/grdspcht/ggret", + "rel": "/software/repository/github/grdspcht/ggret", + "avatar": "https://avatars.githubusercontent.com/u/58748614?v=4", + "description": "ggret: Visualisation of tree-based phylogenetic networks", "topics": [] }, { - "uid": "github/spack/spack", - "url": "https://github.com/spack/spack", - "rel": "/software/repository/github/spack/spack", - "avatar": "https://avatars2.githubusercontent.com/u/25539161?v=4", - "description": "A flexible package manager that supports multiple versions, configurations, platforms, and compilers.", + "uid": "github/YangLab/CIRCexplorer2", + "url": "https://github.com/YangLab/CIRCexplorer2", + "rel": "/software/repository/github/YangLab/CIRCexplorer2", + "avatar": "https://avatars.githubusercontent.com/u/7710533?v=4", + "description": "a comprehensive and integrative circular RNA analysis toolset.", "topics": [ - "python", - "spack", - "package-manager", - "hpc", - "build-tools", - "radiuss", - "macos", - "scientific-computing", - "linux" + "circrna" ] }, { - "uid": "github/markfortune/luas", - "url": "https://github.com/markfortune/luas", - "rel": "/software/repository/github/markfortune/luas", - "avatar": "https://avatars.githubusercontent.com/u/51966164?v=4", - "description": "A small library with efficient implementations of Gaussian processes (GPs) primarily for analysing two-dimensional data sets", + "uid": "github/YangLab/RNAlight", + "url": "https://github.com/YangLab/RNAlight", + "rel": "/software/repository/github/YangLab/RNAlight", + "avatar": "https://avatars.githubusercontent.com/u/7710533?v=4", + "description": "a machine learning model to identify nucleotide features determining RNA subcellular localization", "topics": [] }, { - "uid": "github/eScatter/pyelsepa", - "url": "https://github.com/eScatter/pyelsepa", - "rel": "/software/repository/github/eScatter/pyelsepa", - "avatar": "https://avatars0.githubusercontent.com/u/18676359?v=4", - "description": "A Python wrapper for ELSEPA", + "uid": "github/jkbonfield/io_lib", + "url": "https://github.com/jkbonfield/io_lib", + "rel": "/software/repository/github/jkbonfield/io_lib", + "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", + "description": "Staden Package \"io_lib\" (sometimes referred to as libstaden-read by distributions). This contains code for reading and writing a variety of Bioinformatics / DNA Sequence formats.", "topics": [] }, { - "uid": "github/snakemake/snakemake", - "url": "https://github.com/snakemake/snakemake", - "rel": "/software/repository/github/snakemake/snakemake", - "avatar": "https://avatars1.githubusercontent.com/u/33450111?v=4", - "description": "This is the development home of the workflow management system Snakemake. For general information, see", - "topics": [ - "snakemake", - "reproducibility", - "workflow-management" - ] + "uid": "github/jkbonfield/htscodecs", + "url": "https://github.com/jkbonfield/htscodecs", + "rel": "/software/repository/github/jkbonfield/htscodecs", + "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", + "description": "Custom compression for CRAM and others.", + "topics": [] }, { - "uid": "github/JuliaManifolds/Manopt.jl", - "url": "https://github.com/JuliaManifolds/Manopt.jl", - "rel": "/software/repository/github/JuliaManifolds/Manopt.jl", - "avatar": "https://avatars.githubusercontent.com/u/62259457?v=4", - "description": "Optimization on Manifolds in Julia", - "topics": [ - "manifolds", - "julia", - "optimization", - "manopt" - ] + "uid": "github/jkbonfield/crumble", + "url": "https://github.com/jkbonfield/crumble", + "rel": "/software/repository/github/jkbonfield/crumble", + "avatar": "https://avatars.githubusercontent.com/u/2210525?v=4", + "description": "controllable lossy compression of BAM/CRAM files.", + "topics": [] }, { - "uid": "github/BioMedIA/MIRTK", - "url": "https://github.com/BioMedIA/MIRTK", - "rel": "/software/repository/github/BioMedIA/MIRTK", - "avatar": "https://avatars.githubusercontent.com/u/7911500?v=4", - "description": "The Medical Image Registration ToolKit (MIRTK), the successor of the IRTK, contains common CMake build configuration files, core libraries, and basic command-line tools. Extension packages are hosted by the MIRTK GitHub group at", + "uid": "github/bids-standard/bids-validator", + "url": "https://github.com/bids-standard/bids-validator", + "rel": "/software/repository/github/bids-standard/bids-validator", + "avatar": "https://avatars.githubusercontent.com/u/43044189?v=4", + "description": "Validator for the Brain Imaging Data Structure", "topics": [ - "image-processing", - "image-registration", - "medical-imaging", - "toolkit", - "free-form-deformation", - "ffd" + "bids", + "neuroimaging", + "data-validation" ] }, { - "uid": "github/matsen/pplacer", - "url": "https://github.com/matsen/pplacer", - "rel": "/software/repository/github/matsen/pplacer", - "avatar": "https://avatars.githubusercontent.com/u/112708?v=4", - "description": "Phylogenetic placement and downstream analysis", + "uid": "github/lemene/PECAT", + "url": "https://github.com/lemene/PECAT", + "rel": "/software/repository/github/lemene/PECAT", + "avatar": "https://avatars.githubusercontent.com/u/22316379?v=4", + "description": "PECAT, a phased error correct and assembly tool", "topics": [] }, { - "uid": "github/ni1o1/transbigdata", - "url": "https://github.com/ni1o1/transbigdata", - "rel": "/software/repository/github/ni1o1/transbigdata", - "avatar": "https://avatars.githubusercontent.com/u/53589767?v=4", - "description": "A Python package develop for transportation spatio-temporal big data processing, analysis and visualization.", + "uid": "github/mgcooper/baseflow", + "url": "https://github.com/mgcooper/baseflow", + "rel": "/software/repository/github/mgcooper/baseflow", + "avatar": "https://avatars.githubusercontent.com/u/9771768?v=4", + "description": "baseflow recession analysis toolbox", "topics": [ - "python", - "data-visualization", - "data-analysis", - "transportation", - "spatio-temporal-data", - "geospatial-data", - "data-quality-analysis", - "data-pre-processing", - "taxi-gps-data", - "bus-gps-data", - "bike-sharing-data" + "baseflow", + "groundwater", + "hydrology" ] }, { - "uid": "github/popgenmethods/smcpp", - "url": "https://github.com/popgenmethods/smcpp", - "rel": "/software/repository/github/popgenmethods/smcpp", - "avatar": "https://avatars.githubusercontent.com/u/12285311?v=4", - "description": "SMC++ infers population history from whole-genome sequence data.", - "topics": [] - }, - { - "uid": "github/tardis-sn/tardis", - "url": "https://github.com/tardis-sn/tardis", - "rel": "/software/repository/github/tardis-sn/tardis", - "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", - "description": "TARDIS - Temperature And Radiative Diffusion In Supernovae", + "uid": "github/hematthi/SysSimPyPlots", + "url": "https://github.com/hematthi/SysSimPyPlots", + "rel": "/software/repository/github/hematthi/SysSimPyPlots", + "avatar": "https://avatars.githubusercontent.com/u/29897790?v=4", + "description": "Loading, analyzing, and plotting catalogs from SysSim", "topics": [ - "science", - "astrophysics", + "exoplanets", + "kepler", + "models", + "plotting", "python", - "supernova", - "radiative-transfer" + "simulations" ] }, { - "uid": "github/tardis-sn/carsus", - "url": "https://github.com/tardis-sn/carsus", - "rel": "/software/repository/github/tardis-sn/carsus", - "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", - "description": "Atomic Database for Astronomy", + "uid": "github/hematthi/SysSimPyMMEN", + "url": "https://github.com/hematthi/SysSimPyMMEN", + "rel": "/software/repository/github/hematthi/SysSimPyMMEN", + "avatar": "https://avatars.githubusercontent.com/u/29897790?v=4", + "description": "Inferring the minimum-mass extrasolar nebula (MMEN) from SysSim", "topics": [ + "exoplanets", + "kepler", + "models", + "planet-formation", + "plotting", + "protoplanetary-disks", "python", - "astronomy", - "atomic-database" + "simulations" ] }, { - "uid": "github/tardis-sn/stardis", - "url": "https://github.com/tardis-sn/stardis", - "rel": "/software/repository/github/tardis-sn/stardis", - "avatar": "https://avatars.githubusercontent.com/u/6108234?v=4", - "description": "TARDIS stellar radiative transfer", - "topics": [] + "uid": "github/itpplasma/GORILLA", + "url": "https://github.com/itpplasma/GORILLA", + "rel": "/software/repository/github/itpplasma/GORILLA", + "avatar": "https://avatars.githubusercontent.com/u/48486978?v=4", + "description": "GORILLA: Guiding-center ORbit Integration with Local Linearization Approach", + "topics": [ + "fusion-reactor", + "hamiltonian-systems", + "kinetic-modeling", + "numerical-integration", + "numerical-methods", + "plasma-physics", + "simulation", + "stellarator", + "tokamak", + "guiding-center" + ] }, { - "uid": "github/Guo-Jian-Wang/colfi", - "url": "https://github.com/Guo-Jian-Wang/colfi", - "rel": "/software/repository/github/Guo-Jian-Wang/colfi", - "avatar": "https://avatars.githubusercontent.com/u/50233380?v=4", - "description": "Likelihood-free Inference with neural density estimators", + "uid": "github/CatarinaMMarques/FisherCosmology", + "url": "https://github.com/CatarinaMMarques/FisherCosmology", + "rel": "/software/repository/github/CatarinaMMarques/FisherCosmology", + "avatar": "https://avatars.githubusercontent.com/u/83832933?v=4", + "description": "Forecasting Code for Redshift Drift and Alpha Measurements", "topics": [] }, { - "uid": "github/MrOlm/drep", - "url": "https://github.com/MrOlm/drep", - "rel": "/software/repository/github/MrOlm/drep", - "avatar": "https://avatars.githubusercontent.com/u/13424205?v=4", - "description": "a python program for rapidly comparing large numbers of genomes, dRep can also \"de-replicate\" a genome set by identifying groups of highly similar genomes and choosing the best representative genome for each genome set.", - "topics": [ - "bioinformatics", - "metagenomics", - "microbiology", - "assembly", - "microbial-genomes" - ] - }, - { - "uid": "github/Qepanna/goFlux", - "url": "https://github.com/Qepanna/goFlux", - "rel": "/software/repository/github/Qepanna/goFlux", - "avatar": "https://avatars.githubusercontent.com/u/66706307?v=4", - "description": "goFlux: A user-friendly way to calculate GHG fluxes yourself, regardless of user experience", + "uid": "github/JosephIsaacTurner/pypaperretriever", + "url": "https://github.com/JosephIsaacTurner/pypaperretriever", + "rel": "/software/repository/github/JosephIsaacTurner/pypaperretriever", + "avatar": "https://avatars.githubusercontent.com/u/124412177?v=4", + "description": null, "topics": [] }, { - "uid": "github/jsh58/Genrich", - "url": "https://github.com/jsh58/Genrich", - "rel": "/software/repository/github/jsh58/Genrich", - "avatar": "https://avatars.githubusercontent.com/u/4921955?v=4", - "description": "Detecting sites of genomic enrichment", + "uid": "github/tum-pbs/PhiML", + "url": "https://github.com/tum-pbs/PhiML", + "rel": "/software/repository/github/tum-pbs/PhiML", + "avatar": "https://avatars.githubusercontent.com/u/57992617?v=4", + "description": "Intuitive scientific computing with dimension types for Jax, PyTorch, TensorFlow & NumPy", "topics": [] }, { - "uid": "github/BjoernBiltzinger/pyspi", - "url": "https://github.com/BjoernBiltzinger/pyspi", - "rel": "/software/repository/github/BjoernBiltzinger/pyspi", - "avatar": "https://avatars.githubusercontent.com/u/38947677?v=4", - "description": "Pure python tools for interfacing with INTEGRAL SPI data. It also provides a 3ML plugin for performing full forward folding spectral analysis of GRBs. The documentation with a few examples is available at https://pyspi.readthedocs.io/.", - "topics": [ - "spi-data", - "python", - "3ml" - ] + "uid": "github/CMC-lab/TranCIT", + "url": "https://github.com/CMC-lab/TranCIT", + "rel": "/software/repository/github/CMC-lab/TranCIT", + "avatar": "https://avatars.githubusercontent.com/u/149275802?v=4", + "description": "Transient Causal Interaction estimator", + "topics": [] }, { - "uid": "github/dnafinder/uroccomp", - "url": "https://github.com/dnafinder/uroccomp", - "rel": "/software/repository/github/dnafinder/uroccomp", - "avatar": "https://avatars.githubusercontent.com/u/37176275?v=4", - "description": "Compare two unpaired ROC curves", + "uid": "github/cbroeckl/RAMClustR", + "url": "https://github.com/cbroeckl/RAMClustR", + "rel": "/software/repository/github/cbroeckl/RAMClustR", + "avatar": "https://avatars.githubusercontent.com/u/4959997?v=4", + "description": "Assigning precursor-product ion relationships in indiscriminant MS/MS data", "topics": [] }, { - "uid": "github/nanograv/enterprise", - "url": "https://github.com/nanograv/enterprise", - "rel": "/software/repository/github/nanograv/enterprise", - "avatar": "https://avatars.githubusercontent.com/u/1416848?v=4", - "description": "ENTERPRISE (Enhanced Numerical Toolbox Enabling a Robust PulsaR Inference SuitE) is a pulsar timing analysis code, aimed at noise analysis, gravitational-wave searches, and timing model analysis.", + "uid": "github/ezquiaga/phazap", + "url": "https://github.com/ezquiaga/phazap", + "rel": "/software/repository/github/ezquiaga/phazap", + "avatar": "https://avatars.githubusercontent.com/u/58956463?v=4", + "description": "Gravitational wave phase reconstruction for low-latency identification of strongly lensed signals", "topics": [] }, { - "uid": "github/nanograv/PINT", - "url": "https://github.com/nanograv/PINT", - "rel": "/software/repository/github/nanograv/PINT", - "avatar": "https://avatars.githubusercontent.com/u/1416848?v=4", - "description": "PINT is not TEMPO3 -- Software for high-precision pulsar timing", + "uid": "github/OwenWard/ppdiag", + "url": "https://github.com/OwenWard/ppdiag", + "rel": "/software/repository/github/OwenWard/ppdiag", + "avatar": "https://avatars.githubusercontent.com/u/33092609?v=4", + "description": null, "topics": [] }, { - "uid": "github/jiwoncpark/baobab", - "url": "https://github.com/jiwoncpark/baobab", - "rel": "/software/repository/github/jiwoncpark/baobab", - "avatar": "https://avatars.githubusercontent.com/u/15166916?v=4", - "description": "Generates the training data for hierarchical inference of strongly-lensed systems with Bayesian neural networks", + "uid": "github/debbiemarkslab/plmc", + "url": "https://github.com/debbiemarkslab/plmc", + "rel": "/software/repository/github/debbiemarkslab/plmc", + "avatar": "https://avatars.githubusercontent.com/u/8976419?v=4", + "description": "Inference of couplings in proteins and RNAs from sequence variation", "topics": [ - "lenstronomy", - "bayesian-neural-networks", - "hierarchical-bayesian-analysis", - "strong-lensing" + "protein-sequences", + "sequence-alignments", + "undirected-graphs", + "protein-structure", + "protein-interaction" ] }, { - "uid": "github/icbm-iupui/STAFF", - "url": "https://github.com/icbm-iupui/STAFF", - "rel": "/software/repository/github/icbm-iupui/STAFF", - "avatar": "https://avatars3.githubusercontent.com/u/7242496?v=4", - "description": null, + "uid": "github/lucian-ilie/DELPHI", + "url": "https://github.com/lucian-ilie/DELPHI", + "rel": "/software/repository/github/lucian-ilie/DELPHI", + "avatar": "https://avatars.githubusercontent.com/u/12052304?v=4", + "description": "Deep learning protein-protein binding sites prediction", "topics": [] }, { - "uid": "github/BoPeng/simuPOP", - "url": "https://github.com/BoPeng/simuPOP", - "rel": "/software/repository/github/BoPeng/simuPOP", - "avatar": "https://avatars.githubusercontent.com/u/9889312?v=4", - "description": "A general-purpose forward-time population genetics simulation environment.", + "uid": "github/cytham/nanovar", + "url": "https://github.com/cytham/nanovar", + "rel": "/software/repository/github/cytham/nanovar", + "avatar": "https://avatars.githubusercontent.com/u/25361260?v=4", + "description": "Structural variant caller for low-depth long-read sequencing data", "topics": [] }, { - "uid": "github/AdriaJ/polyclean", - "url": "https://github.com/AdriaJ/polyclean", - "rel": "/software/repository/github/AdriaJ/polyclean", - "avatar": "https://avatars.githubusercontent.com/u/43072455?v=4", - "description": "PolyCLEAN algorithm for radio interferometric imaging, based on Polyatomic Frank-Wolfe.", + "uid": "github/nawrockie/vadr", + "url": "https://github.com/ncbi/vadr", + "rel": "/software/repository/github/nawrockie/vadr", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation", "topics": [] }, { - "uid": "github/DariaGangardt/pAGN", - "url": "https://github.com/DariaGangardt/pAGN", - "rel": "/software/repository/github/DariaGangardt/pAGN", - "avatar": "https://avatars.githubusercontent.com/u/74964676?v=4", - "description": "Python package to solve AGN disk model equations.", - "topics": [] + "uid": "github/haimengzhao/magic-microlensing", + "url": "https://github.com/haimengzhao/magic-microlensing", + "rel": "/software/repository/github/haimengzhao/magic-microlensing", + "avatar": "https://avatars.githubusercontent.com/u/25528207?v=4", + "description": "MAGIC: Microlensing Analysis Guided by Intelligent Computation. A PyTorch framework for automatic analysis of realistic microlensing light curves.", + "topics": [ + "ai4science", + "astronomy", + "machine-learning", + "microlensing" + ] }, { - "uid": "github/raspishake/rsudp", - "url": "https://github.com/raspishake/rsudp", - "rel": "/software/repository/github/raspishake/rsudp", - "avatar": "https://avatars.githubusercontent.com/u/26871117?v=4", - "description": "Continuous visual display, sudden motion monitoring, and historical replay of Raspberry Shake data", - "topics": [] + "uid": "github/aomlomics/tourmaline", + "url": "https://github.com/aomlomics/tourmaline", + "rel": "/software/repository/github/aomlomics/tourmaline", + "avatar": "https://avatars.githubusercontent.com/u/65427403?v=4", + "description": "Amplicon sequence processing workflow using QIIME 2 and Snakemake", + "topics": [ + "noaa-omics-software", + "amplicon-sequence-variants", + "dada2", + "deblur", + "snakemake" + ] }, { - "uid": "github/mtholder/ncl", - "url": "https://github.com/mtholder/ncl", - "rel": "/software/repository/github/mtholder/ncl", - "avatar": "https://avatars.githubusercontent.com/u/136067?v=4", - "description": "Nexus Class Library ", + "uid": "github/DerrickWood/kraken2", + "url": "https://github.com/DerrickWood/kraken2", + "rel": "/software/repository/github/DerrickWood/kraken2", + "avatar": "https://avatars.githubusercontent.com/u/5395172?v=4", + "description": "The second version of the Kraken taxonomic sequence classification system ", "topics": [] }, { - "uid": "github/adamjermyn/Skye", - "url": "https://github.com/adamjermyn/Skye", - "rel": "/software/repository/github/adamjermyn/Skye", - "avatar": "https://avatars.githubusercontent.com/u/6233759?v=4", - "description": "A differentiable equation of state", - "topics": [] + "uid": "github/geoelements/gns", + "url": "https://github.com/geoelements/gns", + "rel": "/software/repository/github/geoelements/gns", + "avatar": "https://avatars.githubusercontent.com/u/76979620?v=4", + "description": "Graph Network Simulator", + "topics": [ + "graph-network-simulator", + "deep-learning", + "machine-learning", + "pytorch" + ] }, { - "uid": "github/nhhaidee/WaveSeekerNet", - "url": "https://github.com/nhhaidee/WaveSeekerNet", - "rel": "/software/repository/github/nhhaidee/WaveSeekerNet", - "avatar": "https://avatars.githubusercontent.com/u/30271407?v=4", + "uid": "github/RichardPIII/Cumulative-Time-Dilation", + "url": "https://github.com/RichardPIII/Cumulative-Time-Dilation", + "rel": "/software/repository/github/RichardPIII/Cumulative-Time-Dilation", + "avatar": "https://avatars.githubusercontent.com/u/197427316?v=4", "description": null, "topics": [] }, { - "uid": "github/ABM4ALL/Melodie", - "url": "https://github.com/ABM4ALL/Melodie", - "rel": "/software/repository/github/ABM4ALL/Melodie", - "avatar": "https://avatars.githubusercontent.com/u/88455886?v=4", - "description": "A general framework for developing agent-based models in Python.", + "uid": "github/rohinkumar/correlcalc", + "url": "https://github.com/rohinkumar/correlcalc", + "rel": "/software/repository/github/rohinkumar/correlcalc", + "avatar": "https://avatars.githubusercontent.com/u/3352158?v=4", + "description": "A Python package to calculate 2-point correlation function from galaxy redshift surveys for any generic model of Cosmology or geometry", "topics": [] }, { - "uid": "github/zqfang/gseapy", - "url": "https://github.com/zqfang/GSEApy", - "rel": "/software/repository/github/zqfang/gseapy", - "avatar": "https://avatars.githubusercontent.com/u/5889336?v=4", - "description": "Gene Set Enrichment Analysis in Python", + "uid": "github/vsquicciarini/madys", + "url": "https://github.com/vsquicciarini/madys", + "rel": "/software/repository/github/vsquicciarini/madys", + "avatar": "https://avatars.githubusercontent.com/u/78115109?v=4", + "description": "MADYS: isochronal parameter determination for young stellar and substellar objects", "topics": [ - "gsea", - "enrichment-analysis", - "python3", - "rust" + "astronomy", + "direct-imaging", + "gaia", + "model-comparison", + "parameter-estimation", + "python", + "sql", + "stellar-astrophysics" ] }, { - "uid": "github/johnlee4/CoCoCoNet", - "url": "https://github.com/johnlee4/CoCoCoNet", - "rel": "/software/repository/github/johnlee4/CoCoCoNet", - "avatar": "https://avatars.githubusercontent.com/u/56409241?v=4", - "description": "Conserved and Comparative Co-expression across Diverse Species", + "uid": "github/VeinsOfTheEarth/rabpro", + "url": "https://github.com/VeinsOfTheEarth/rabpro", + "rel": "/software/repository/github/VeinsOfTheEarth/rabpro", + "avatar": "https://avatars.githubusercontent.com/u/88787335?v=4", + "description": "River and basin profiler", "topics": [ - "co-expression", - "comparative-genomics", - "conservation", - "gene-expression" + "python", + "manuscript" ] }, { - "uid": "github/NETL-RIC/URC-Assessment-Method", - "url": "https://github.com/NETL-RIC/URC-Assessment-Method", - "rel": "/software/repository/github/NETL-RIC/URC-Assessment-Method", - "avatar": "https://avatars.githubusercontent.com/u/28026492?v=4", - "description": "Tool for evaluating the potential occurrence of URC resources using a series of validated heuristics.", - "topics": [] - }, - { - "uid": "github/jeancmaia/mcglm", - "url": "https://github.com/jeancmaia/mcglm", - "rel": "/software/repository/github/jeancmaia/mcglm", - "avatar": "https://avatars.githubusercontent.com/u/33667670?v=4", - "description": "Python Framework for Multivariate Covariance Generalized Linear Models ", + "uid": "github/luizfelippesr/galmag", + "url": "https://github.com/luizfelippesr/galmag", + "rel": "/software/repository/github/luizfelippesr/galmag", + "avatar": "https://avatars.githubusercontent.com/u/11710467?v=4", + "description": "GalMag - A Python tool for computing realistic galactic magnetic fields", "topics": [ - "statistical-inference", - "statistical-models", - "data-science", + "galactic-magnetic-fields", + "astrophysics", + "mean-field-dynamo", "python" ] }, { - "uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", - "url": "https://github.com/JuliaDynamics/TransitionsInTimeseries.jl", - "rel": "/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", - "avatar": "https://avatars.githubusercontent.com/u/31774341?v=4", - "description": "Transition Indicators / Early Warning Signals / Regime Shifts / Change Point Detection", + "uid": "github/luizfelippesr/magnetizer", + "url": "https://github.com/luizfelippesr/magnetizer", + "rel": "/software/repository/github/luizfelippesr/magnetizer", + "avatar": "https://avatars.githubusercontent.com/u/11710467?v=4", + "description": "Magnetizer - A Fortran code that post-processes the output of a semi-analytic model of galaxy formation and produces a catalogue of galaxies with detailed radial dependent ISM properties, including magnetic fields", "topics": [ - "critical-transitions", - "early-warning-signals", - "nonlinear-dynamics", - "nonlinear-timeseries-analysis", - "tipping-points", - "hacktoberfest", - "change-point-detection", - "critical-slowing-down", - "resilience-loss" + "astrophysics", + "mean-field-dynamo", + "galaxies", + "interstellar-medium" ] }, { - "uid": "github/JuliaDynamics/DrWatson.jl", - "url": "https://github.com/JuliaDynamics/DrWatson.jl", - "rel": "/software/repository/github/JuliaDynamics/DrWatson.jl", - "avatar": "https://avatars1.githubusercontent.com/u/31774341?v=4", - "description": "The perfect sidekick to your scientific inquiries", + "uid": "github/stillwater-sc/universal", + "url": "https://github.com/stillwater-sc/universal", + "rel": "/software/repository/github/stillwater-sc/universal", + "avatar": "https://avatars.githubusercontent.com/u/18295447?v=4", + "description": "Large collection of number systems providing custom arithmetic and mixed-precision algorithms for AI, Machine Learning, Computer Vision, Signal Processing, CAE, EDA, control, optimization, estimation, and approximation.", "topics": [ - "science", - "science-research", - "project-management", - "project-assistant", - "simulations", - "setup-tool" + "arithmetic", + "integer-arithmetic", + "fixed-point-arithmetic", + "rational-arithmetic", + "floating-point-arithmetic", + "posit-arithmetic", + "interval-arithmetic", + "quarter-precision", + "half-precision", + "quad-precision", + "octa-precision", + "arbitrary-precision", + "arbitrary-precision-integers", + "arbitrary-precision-arithmetic", + "arbitrary-precision-floats", + "c-plus-plus", + "embedded-systems", + "artificial-intelligence", + "digital-signal-processing" ] }, { - "uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", - "url": "https://github.com/JuliaDynamics/TimeseriesSurrogates.jl", - "rel": "/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", - "avatar": "https://avatars.githubusercontent.com/u/31774341?v=4", - "description": "A Julia library for generating surrogate data.", - "topics": [ - "timeseries", - "nonlinear-time-series", - "surrogate", - "surrogates", - "hacktoberfest", - "hypothesis-testing", - "julia" - ] + "uid": "github/adriancorrendo/metrica", + "url": "https://github.com/adriancorrendo/metrica", + "rel": "/software/repository/github/adriancorrendo/metrica", + "avatar": "https://avatars.githubusercontent.com/u/46946511?v=4", + "description": "Prediction Performance Metrics", + "topics": [] }, { - "uid": "github/MatthijsHak/MetalDock", - "url": "https://github.com/MatthijsHak/MetalDock", - "rel": "/software/repository/github/MatthijsHak/MetalDock", - "avatar": "https://avatars.githubusercontent.com/u/95848709?v=4", - "description": "Dock organometallic compounds to proteins/DNA/biomolecules", - "topics": [] + "uid": "github/Mihart-web/CARBONETTE", + "url": "https://github.com/Mihart-web/CARBONETTE", + "rel": "/software/repository/github/Mihart-web/CARBONETTE", + "avatar": "https://avatars.githubusercontent.com/u/80395512?v=4", + "description": "CARBONETTE PIPELINE \u2014 INTERPRETATION GUIDE", + "topics": [ + "cnt", + "engine", + "hnt", + "spectral-analysis", + "spectral-data", + "spectral-methods" + ] }, { - "uid": "github/sustainableaviation/jetfuelburn", - "url": "https://github.com/sustainableaviation/jetfuelburn", - "rel": "/software/repository/github/sustainableaviation/jetfuelburn", - "avatar": "https://avatars.githubusercontent.com/u/139961793?v=4", - "description": "\ud83d\udee2\ufe0f\ud83d\udee9\ufe0f Calculation toolkit for aircraft fuel consumption", + "uid": "github/gasparl/possa", + "url": "https://github.com/gasparl/possa", + "rel": "/software/repository/github/gasparl/possa", + "avatar": "https://avatars.githubusercontent.com/u/37374850?v=4", + "description": "POSSA: Power simulation for sequential analyses and multiple hypotheses.", "topics": [ - "aviation", - "fuel", - "lca" + "multiple-testing", + "r", + "r-pkg", + "sequential-analyses", + "sequential-design", + "statistical-analysis" ] }, { - "uid": "github/yhoogstrate/fastafs", - "url": "https://github.com/yhoogstrate/fastafs", - "rel": "/software/repository/github/yhoogstrate/fastafs", - "avatar": "https://avatars.githubusercontent.com/u/2264697?v=4", - "description": "toolkit for file system virtualisation of random access compressed FASTA, FAI, DICT & TWOBIT files", + "uid": "github/dglaeser/gridformat", + "url": "https://github.com/dglaeser/gridformat", + "rel": "/software/repository/github/dglaeser/gridformat", + "avatar": "https://avatars.githubusercontent.com/u/49902895?v=4", + "description": "Header-only C++-Library for grid file I/O", "topics": [ - "dna-sequences", - "compression", - "filesystem", - "fuse-filesystem", - "fasta", - "2bit" + "computational-grid", + "input-output", + "numerical-modeling", + "simulation" ] }, { - "uid": "github/vidakris/flatwrm", - "url": "https://github.com/vidakris/flatwrm", - "rel": "/software/repository/github/vidakris/flatwrm", - "avatar": "https://avatars.githubusercontent.com/u/37143945?v=4", - "description": "Python-based machine learning code for detecting and analyzing flares", + "uid": "github/variomes/sibtm-variomes", + "url": "https://github.com/variomes/sibtm-variomes", + "rel": "/software/repository/github/variomes/sibtm-variomes", + "avatar": "https://avatars.githubusercontent.com/u/95295102?v=4", + "description": null, "topics": [] }, { - "uid": "github/solislemuslab/minaa", - "url": "https://github.com/solislemuslab/minaa", - "rel": "/software/repository/github/solislemuslab/minaa", - "avatar": "https://avatars.githubusercontent.com/u/57375595?v=4", - "description": "MiNAA aligns a pair of networks based their topologies and biologies.", + "uid": "github/iquasere/UPIMAPI", + "url": "https://github.com/iquasere/UPIMAPI", + "rel": "/software/repository/github/iquasere/UPIMAPI", + "avatar": "https://avatars.githubusercontent.com/u/16226371?v=4", + "description": "UniProt Id Mapping through API", "topics": [ - "graal", - "graph-algorithm", - "graphlets", - "interaction-network", - "microbiome", - "network-alignment", - "orca" + "genomics", + "uniprot", + "id-mapping", + "functional-information", + "taxonomic-information" ] }, { - "uid": "github/genouest/biomaj-cli", - "url": "https://github.com/genouest/biomaj-cli", - "rel": "/software/repository/github/genouest/biomaj-cli", - "avatar": "https://avatars.githubusercontent.com/u/1004255?v=4", - "description": "CLI for BioMAJ", + "uid": "github/mtceballos/SIRENAdoc", + "url": "https://github.com/mtceballos/SIRENAdoc", + "rel": "/software/repository/github/mtceballos/SIRENAdoc", + "avatar": "https://avatars.githubusercontent.com/u/7905495?v=4", + "description": "SIRENA documentation", "topics": [] }, { - "uid": "github/genouest/biomaj-daemon", - "url": "https://github.com/genouest/biomaj-daemon", - "rel": "/software/repository/github/genouest/biomaj-daemon", - "avatar": "https://avatars.githubusercontent.com/u/1004255?v=4", - "description": "micro service to manage biomaj client requests and bank updates", + "uid": "github/VirtualPhotonics/MieSimulatorGUI", + "url": "https://github.com/VirtualPhotonics/MieSimulatorGUI", + "rel": "/software/repository/github/VirtualPhotonics/MieSimulatorGUI", + "avatar": "https://avatars.githubusercontent.com/u/26932731?v=4", + "description": "Mie Simulator GUI", "topics": [] }, { - "uid": "github/lasseignelab/CINmetrics", - "url": "https://github.com/lasseignelab/CINmetrics", - "rel": "/software/repository/github/lasseignelab/CINmetrics", - "avatar": "https://avatars.githubusercontent.com/u/46378910?v=4", - "description": "CINmetrics R package", + "uid": "github/BPSB/combine-p-values-discrete", + "url": "https://github.com/BPSB/combine-p-values-discrete", + "rel": "/software/repository/github/BPSB/combine-p-values-discrete", + "avatar": "https://avatars.githubusercontent.com/u/37617749?v=4", + "description": null, "topics": [] }, { - "uid": "github/deepmind/alphafold", - "url": "https://github.com/deepmind/alphafold", - "rel": "/software/repository/github/deepmind/alphafold", - "avatar": "https://avatars.githubusercontent.com/u/8596759?v=4", - "description": "Open source code for AlphaFold.", + "uid": "github/bsumlin/PyMieScatt", + "url": "https://github.com/bsumlin/PyMieScatt", + "rel": "/software/repository/github/bsumlin/PyMieScatt", + "avatar": "https://avatars.githubusercontent.com/u/30328179?v=4", + "description": "A collection of forward and inverse Mie solving routines for Python 3, based on Bohren and Huffman's Mie Theory derivations", + "topics": [ + "python3", + "python-3", + "optics", + "light-scattering", + "electromagnetics", + "physics", + "mie", + "aerosol", + "atmospheric-science", + "atmospheric-scattering", + "science" + ] + }, + { + "uid": "github/lukapecnik/NiaAML", + "url": "https://github.com/lukapecnik/NiaAML", + "rel": "/software/repository/github/lukapecnik/NiaAML", + "avatar": "https://avatars.githubusercontent.com/u/23029992?v=4", + "description": "Python automated machine learning framework.", + "topics": [ + "machine-learning", + "automl", + "nature-inspired-algorithms", + "python", + "framework", + "classification", + "classification-pipelines" + ] + }, + { + "uid": "github/TinkerTools/tinker9", + "url": "https://github.com/TinkerTools/tinker9", + "rel": "/software/repository/github/TinkerTools/tinker9", + "avatar": "https://avatars.githubusercontent.com/u/39835945?v=4", + "description": "Tinker9: Next Generation of Tinker with GPU Support", + "topics": [ + "molecular-dynamics", + "molecular-mechanics", + "force-fields", + "biomolecular-simulation", + "molecular-modeling", + "gpu-computing" + ] + }, + { + "uid": "github/TinkerTools/Tinker-HP", + "url": "https://github.com/TinkerTools/tinker-hp", + "rel": "/software/repository/github/TinkerTools/Tinker-HP", + "avatar": "https://avatars.githubusercontent.com/u/39835945?v=4", + "description": "Tinker-HP: High-Performance Massively Parallel Evolution of Tinker on CPUs & GPUs", "topics": [] }, { - "uid": "github/askap-craco/CELEBI", - "url": "https://github.com/askap-craco/CELEBI", - "rel": "/software/repository/github/askap-craco/CELEBI", - "avatar": "https://avatars.githubusercontent.com/u/93304506?v=4", - "description": "The CRAFT Effortless Localisation and Enhanced Burst Inspection Pipeline", + "uid": "github/LidkeLab/matlab-instrument-control", + "url": "https://github.com/LidkeLab/matlab-instrument-control", + "rel": "/software/repository/github/LidkeLab/matlab-instrument-control", + "avatar": "https://avatars.githubusercontent.com/u/13421505?v=4", + "description": "A collection of MATLAB classes to control various equipment used in fluorescence microscopy", "topics": [] }, { - "uid": "github/PopGenClustering/Clumppling", - "url": "https://github.com/PopGenClustering/Clumppling", - "rel": "/software/repository/github/PopGenClustering/Clumppling", - "avatar": "https://avatars.githubusercontent.com/u/113391343?v=4", - "description": null, + "uid": "github/jradavenport/TheHammer", + "url": "https://github.com/jradavenport/TheHammer", + "rel": "/software/repository/github/jradavenport/TheHammer", + "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", + "description": "The Hammer: An IDL Spectral Typing Suite", "topics": [] }, { - "uid": "github/alvinxhan/Phydelity", - "url": "https://github.com/alvinxhan/Phydelity", - "rel": "/software/repository/github/alvinxhan/Phydelity", - "avatar": "https://avatars0.githubusercontent.com/u/17022871?v=4", - "description": "Inference of putative transmission phylogenetic clusters", + "uid": "github/jradavenport/appaloosa", + "url": "https://github.com/jradavenport/appaloosa", + "rel": "/software/repository/github/jradavenport/appaloosa", + "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", + "description": "Python-based flare finding code for Kepler light curves.", "topics": [] }, { - "uid": "github/juanaldayparejo/archnemesis-dist", - "url": "https://github.com/juanaldayparejo/archnemesis-dist", - "rel": "/software/repository/github/juanaldayparejo/archnemesis-dist", - "avatar": "https://avatars.githubusercontent.com/u/67833635?v=4", - "description": "Python version of the NEMESIS radiative transfer and retrieval tool.", + "uid": "github/jradavenport/FBEYE", + "url": "https://github.com/jradavenport/FBEYE", + "rel": "/software/repository/github/jradavenport/FBEYE", + "avatar": "https://avatars.githubusercontent.com/u/3179868?v=4", + "description": "Flares By Eye, an IDL suite for analyzing Kepler light curves and validating flares", "topics": [] }, { - "uid": "github/BPSB/combine-p-values-discrete", - "url": "https://github.com/BPSB/combine-p-values-discrete", - "rel": "/software/repository/github/BPSB/combine-p-values-discrete", - "avatar": "https://avatars.githubusercontent.com/u/37617749?v=4", + "uid": "github/sunnyvagnozzi/Braneworld-extra-dimensions", + "url": "https://github.com/sunnyvagnozzi/Braneworld-extra-dimensions", + "rel": "/software/repository/github/sunnyvagnozzi/Braneworld-extra-dimensions", + "avatar": "https://avatars.githubusercontent.com/u/18328923?v=4", "description": null, "topics": [] }, { - "uid": "github/dgbowl/yadg", - "url": "https://github.com/dgbowl/yadg", - "rel": "/software/repository/github/dgbowl/yadg", - "avatar": "https://avatars.githubusercontent.com/u/97680503?v=4", - "description": "yadg: yet another datagram", + "uid": "github/mikolmogorov/Flye", + "url": "https://github.com/mikolmogorov/Flye", + "rel": "/software/repository/github/mikolmogorov/Flye", + "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", + "description": "De novo assembler for single molecule sequencing reads using repeat graphs", + "topics": [] + }, + { + "uid": "github/areenberg/MDPSolver", + "url": "https://github.com/areenberg/MDPSolver", + "rel": "/software/repository/github/areenberg/MDPSolver", + "avatar": "https://avatars.githubusercontent.com/u/48519503?v=4", + "description": "A fast solver for Markov Decision Processes", "topics": [ - "parser", - "data-science", - "electrochemistry", - "chromatography", - "catalysis" + "decision-process", + "markov-decision-process", + "optimization", + "predictive-maintenance", + "reinforcement-learning", + "solver" ] }, { - "uid": "github/BioinfoUNIBA/REDItools2", - "url": "https://github.com/BioinfoUNIBA/REDItools2", - "rel": "/software/repository/github/BioinfoUNIBA/REDItools2", - "avatar": "https://avatars.githubusercontent.com/u/50454732?v=4", - "description": null, + "uid": "github/TNEL-UCSD/autolfads-deploy", + "url": "https://github.com/TNEL-UCSD/autolfads-deploy", + "rel": "/software/repository/github/TNEL-UCSD/autolfads-deploy", + "avatar": "https://avatars.githubusercontent.com/u/7026679?v=4", + "description": "Deployment strategies for AutoLFADS", "topics": [] }, { - "uid": "github/bedops/bedops", - "url": "https://github.com/bedops/bedops", - "rel": "/software/repository/github/bedops/bedops", - "avatar": "https://avatars.githubusercontent.com/u/5489260?v=4", - "description": ":microscope: BEDOPS: high-performance genomic feature operations", - "topics": [ - "bedops", - "c", - "c-plus-plus", - "bed", - "genomics", - "set", - "set-theory", - "conversion", - "compression", - "toolkit", - "parallel", - "pipeline", - "bioinformatics" - ] + "uid": "github/teuben/QAC", + "url": "https://github.com/teuben/QAC", + "rel": "/software/repository/github/teuben/QAC", + "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", + "description": "Quick Array Combinations: front end to CASA to run tp2vis, feather and various array combination methods", + "topics": [] }, { - "uid": "github/hydrosolutions/riversCentralAsia", - "url": "https://github.com/hydrosolutions/riversCentralAsia", - "rel": "/software/repository/github/hydrosolutions/riversCentralAsia", - "avatar": "https://avatars.githubusercontent.com/u/10865030?v=4", - "description": "Package with helper functions to load, manage and analyze hydrometeorological data from Central Asia", + "uid": "github/teuben/DataComb", + "url": "https://github.com/teuben/DataComb", + "rel": "/software/repository/github/teuben/DataComb", + "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", + "description": "Code for the DataComb paper", "topics": [] }, { - "uid": "github/jupyterlab/jupyterlab", - "url": "https://github.com/jupyterlab/jupyterlab", - "rel": "/software/repository/github/jupyterlab/jupyterlab", - "avatar": "https://avatars.githubusercontent.com/u/22800682?v=4", - "description": "JupyterLab computational environment.", + "uid": "github/teuben/nemo", + "url": "https://github.com/teuben/nemo", + "rel": "/software/repository/github/teuben/nemo", + "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", + "description": "a Stellar Dynamics Toolbox (Not Everybody Must Observe)", "topics": [ - "jupyterlab", - "jupyter" + "galactic-astronomy", + "image-analysis", + "orbital-simulation", + "fits-files", + "tabular-data", + "nbody-gravity" ] }, { - "uid": "github/casaluca/bolometric-corrections", - "url": "https://github.com/casaluca/bolometric-corrections", - "rel": "/software/repository/github/casaluca/bolometric-corrections", - "avatar": "https://avatars.githubusercontent.com/u/35479737?v=4", - "description": "compute bolometric corrections and synthetic colours for input values of stellar parameters", - "topics": [ - "stars", - "isochrones", - "photometry", - "colours", - "bolometric-corrections", - "synthetic-colours", - "astronomy", - "astrophysics" - ] + "uid": "github/ahcm/ffindex", + "url": "https://github.com/ahcm/ffindex", + "rel": "/software/repository/github/ahcm/ffindex", + "avatar": "https://avatars.githubusercontent.com/u/13995862?v=4", + "description": "simple index/database for huge amounts of small files", + "topics": [] }, { - "uid": "github/hungyipu/Odyssey", - "url": "https://github.com/hungyipu/Odyssey", - "rel": "/software/repository/github/hungyipu/Odyssey", - "avatar": "https://avatars.githubusercontent.com/u/14836746?v=4", - "description": "Odyssey: a public, GPU-based GRRT (general relativistic radiative transfer) code", + "uid": "github/apcamargo/prodigal-gv", + "url": "https://github.com/apcamargo/prodigal-gv", + "rel": "/software/repository/github/apcamargo/prodigal-gv", + "avatar": "https://avatars.githubusercontent.com/u/22940964?v=4", + "description": "A fork of Prodigal meant to improve gene calling for giant viruses and viruses that use alternative genetic codes", "topics": [] }, { - "uid": "github/niemasd/CoaTran", - "url": "https://github.com/niemasd/CoaTran", - "rel": "/software/repository/github/niemasd/CoaTran", - "avatar": "https://avatars.githubusercontent.com/u/4195510?v=4", - "description": "CoaTran: Coalescent tree simulation along a transmission network", + "uid": "github/pyomeca/biosiglive", + "url": "https://github.com/pyomeca/biosiglive", + "rel": "/software/repository/github/pyomeca/biosiglive", + "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", + "description": null, "topics": [] }, { - "uid": "github/CSi-Studio/G-Aligner", - "url": "https://github.com/CSi-Studio/G-Aligner", - "rel": "/software/repository/github/CSi-Studio/G-Aligner", - "avatar": "https://avatars.githubusercontent.com/u/50073614?v=4", - "description": "G-Aligner: a graph-based feature alignment method for untargeted LC-MS-based metabolomics", + "uid": "github/pyomeca/ezc3d", + "url": "https://github.com/pyomeca/ezc3d", + "rel": "/software/repository/github/pyomeca/ezc3d", + "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", + "description": "Easy to use C3D reader/writer for C++, Python and Matlab", "topics": [] }, { - "uid": "github/computational-chemical-biology/ChemWalker", - "url": "https://github.com/computational-chemical-biology/ChemWalker", - "rel": "/software/repository/github/computational-chemical-biology/ChemWalker", - "avatar": "https://avatars.githubusercontent.com/u/50704327?v=4", - "description": null, + "uid": "github/pyomeca/biorbd", + "url": "https://github.com/pyomeca/biorbd", + "rel": "/software/repository/github/pyomeca/biorbd", + "avatar": "https://avatars.githubusercontent.com/u/36738416?v=4", + "description": "Biomechanical add-ons to the RigidBody Dynamics Library", "topics": [] }, { - "uid": "github/damonge/CRIME", - "url": "https://github.com/damonge/CRIME", - "rel": "/software/repository/github/damonge/CRIME", - "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", - "description": "Cosmological Realizations for Intensity Mapping Experiments", + "uid": "github/PolymerGuy/recolo", + "url": "https://github.com/PolymerGuy/recolo", + "rel": "/software/repository/github/PolymerGuy/recolo", + "avatar": "https://avatars.githubusercontent.com/u/13745749?v=4", + "description": "Load reconstuction using virtual fields", "topics": [] }, { - "uid": "github/damonge/CoLoRe", - "url": "https://github.com/damonge/CoLoRe", - "rel": "/software/repository/github/damonge/CoLoRe", - "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", - "description": "CoLoRe - Cosmological Lofty Realizations", - "topics": [] + "uid": "github/pandegroup/openmm", + "url": "https://github.com/openmm/openmm", + "rel": "/software/repository/github/pandegroup/openmm", + "avatar": "https://avatars.githubusercontent.com/u/52428936?v=4", + "description": "OpenMM is a toolkit for molecular simulation using high performance GPU code. ", + "topics": [ + "simulation", + "molecular-dynamics" + ] }, { - "uid": "github/damonge/CUTE", - "url": "https://github.com/damonge/CUTE", - "rel": "/software/repository/github/damonge/CUTE", - "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", - "description": "Correlation Utilities and Two-point Estimation", - "topics": [] + "uid": "github/amanchokshi/EMBERS", + "url": "https://github.com/amanchokshi/EMBERS", + "rel": "/software/repository/github/amanchokshi/EMBERS", + "avatar": "https://avatars2.githubusercontent.com/u/40157844?v=4", + "description": "Experimental Measurement of BEam Responses with Satellites", + "topics": [ + "radio-astronomy", + "satellites", + "telescope", + "murchison-widefield-array" + ] }, { - "uid": "github/damonge/schNell", - "url": "https://github.com/damonge/schNell", - "rel": "/software/repository/github/damonge/schNell", - "avatar": "https://avatars.githubusercontent.com/u/8809493?v=4", - "description": "Fast calculation of N_ell for GW anisotropies", + "uid": "github/free1234hm/CLAM", + "url": "https://github.com/free1234hm/CLAM", + "rel": "/software/repository/github/free1234hm/CLAM", + "avatar": "https://avatars.githubusercontent.com/u/20533099?v=4", + "description": null, "topics": [] }, { - "uid": "github/sauddy/GRINN", - "url": "https://github.com/sauddy/GRINN", - "rel": "/software/repository/github/sauddy/GRINN", - "avatar": "https://avatars.githubusercontent.com/u/46558389?v=4", - "description": "We solve hydrodynamical equation including self-gravitating using Physics Informed Neural Networks. We study Jeans instability in self-gravitating gas in star forming molecular clouds", + "uid": "github/JensUweUlrich/ReadBouncer", + "url": "https://github.com/JensUweUlrich/ReadBouncer", + "rel": "/software/repository/github/JensUweUlrich/ReadBouncer", + "avatar": "https://avatars.githubusercontent.com/u/46562264?v=4", + "description": "Fast and scalable nanopore adaptive sampling", "topics": [] }, { - "uid": "github/oschwengers/platon", - "url": "https://github.com/oschwengers/platon", - "rel": "/software/repository/github/oschwengers/platon", - "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", - "description": "Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.", + "uid": "github/dftd3/simple-dftd3", + "url": "https://github.com/dftd3/simple-dftd3", + "rel": "/software/repository/github/dftd3/simple-dftd3", + "avatar": "https://avatars.githubusercontent.com/u/104521936?v=4", + "description": "Library first implementation of the D3 dispersion correction", "topics": [ - "microbiology", - "bioinformatics", - "plasmids", - "ngs", - "wgs", - "contigs", - "bacteria", - "assembly" + "quantum-chemistry", + "dispersion-correction", + "ase", + "computational-chemistry", + "pyscf", + "qcschema" ] }, { - "uid": "github/oschwengers/referenceseeker", - "url": "https://github.com/oschwengers/referenceseeker", - "rel": "/software/repository/github/oschwengers/referenceseeker", - "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", - "description": "Rapid determination of appropriate reference genomes.", + "uid": "github/ExeClim/Isca", + "url": "https://github.com/ExeClim/Isca", + "rel": "/software/repository/github/ExeClim/Isca", + "avatar": "https://avatars.githubusercontent.com/u/13350658?v=4", + "description": "Idealized GCM from the University of Exeter", "topics": [ - "bioinformatics", - "reference-genomes", - "mash", - "refseq", - "wgs", - "microbiology", - "ani" + "planetary-atmospheres", + "atmospheric-science", + "atmospheric-modelling", + "geophysical-fluid-dynamics", + "climate-model" ] }, { - "uid": "github/oschwengers/bakta", - "url": "https://github.com/oschwengers/bakta", - "rel": "/software/repository/github/oschwengers/bakta", - "avatar": "https://avatars.githubusercontent.com/u/10071818?v=4", - "description": "Rapid & standardized annotation of bacterial genomes & plasmids", - "topics": [ - "bioinformatics", - "microbial-genomics", - "genome-annotation", - "bacteria", - "bacterial-genomes", - "plasmids" - ] + "uid": "github/ebmonson/2DFFTUtils-Module", + "url": "https://github.com/ebmonson/2DFFTUtils-Module", + "rel": "/software/repository/github/ebmonson/2DFFTUtils-Module", + "avatar": "https://avatars.githubusercontent.com/u/12664505?v=4", + "description": "A Python module implementation of some tasks associated with measuring spiral galaxy pitch angle with 2DFFT. To be merged into the 2dfft_utils repository at a later date. TODO: Rename package and repository to SpiralUtils.", + "topics": [] }, { - "uid": "github/skschum/MFAssignR", - "url": "https://github.com/skschum/MFAssignR", - "rel": "/software/repository/github/skschum/MFAssignR", - "avatar": "https://avatars.githubusercontent.com/u/25142164?v=4", - "description": "The MFAssignR package was designed for multi-element molecular formula (MF) assignment of ultrahigh resolution mass spectrometry measurements. A number of tools for internal mass recalibration, MF assignment, signal-to-noise evaluation, and unambiguous formula selections are provided.", + "uid": "github/GeneDx/scramble", + "url": "https://github.com/GeneDx/scramble", + "rel": "/software/repository/github/GeneDx/scramble", + "avatar": "https://avatars.githubusercontent.com/u/43077724?v=4", + "description": "runs as a two-step process. First cluster_identifier is used to generate soft-clipped read cluster consensus sequences. Second, SCRAMBle-MEIs.R analyzes the cluster file for likely Mobile Element Insertions.", "topics": [] }, { - "uid": "github/MilesCranmer/PySR", - "url": "https://github.com/MilesCranmer/PySR", - "rel": "/software/repository/github/MilesCranmer/PySR", - "avatar": "https://avatars.githubusercontent.com/u/7593028?v=4", - "description": "High-Performance Symbolic Regression in Python and Julia", + "uid": "github/KskAdch/TopologicalNumbers.jl", + "url": "https://github.com/KskAdch/TopologicalNumbers.jl", + "rel": "/software/repository/github/KskAdch/TopologicalNumbers.jl", + "avatar": "https://avatars.githubusercontent.com/u/139373570?v=4", + "description": "A Julia package for calculating topological numbers", "topics": [ - "symbolic-regression", - "machine-learning", - "python", + "condensed-matter-physics", "julia", - "genetic-algorithm", - "automl", - "interpretable-ml", - "data-science", - "explainable-ai", - "scikit-learn", - "symbolic", - "algorithm", - "distributed-systems", - "evolutionary-algorithms", - "equation-discovery" + "julia-language", + "julia-package", + "julialang", + "chernnumbers", + "z2numbers" ] }, { - "uid": "github/matteozennaro/reps", - "url": "https://github.com/matteozennaro/reps", - "rel": "/software/repository/github/matteozennaro/reps", - "avatar": "https://avatars.githubusercontent.com/u/16953721?v=4", - "description": "REPS - rescaled power spectra for initial conditions with massive neutrinos", - "topics": [] - }, - { - "uid": "github/ScialdoneLab/MitoHEAR", - "url": "https://github.com/ScialdoneLab/MitoHEAR", - "rel": "/software/repository/github/ScialdoneLab/MitoHEAR", - "avatar": "https://avatars.githubusercontent.com/u/42929618?v=4", - "description": "MitoHEAR (Mitochondrial HEteroplasmy AnalyzeR) is an R package that allows the estimation as well as downstream statistical analysis of the mtDNA heteroplasmy calculated from single-cell datasets.", + "uid": "github/einsteinpy/einsteinpy", + "url": "https://github.com/einsteinpy/einsteinpy", + "rel": "/software/repository/github/einsteinpy/einsteinpy", + "avatar": "https://avatars.githubusercontent.com/u/47172316?v=4", + "description": "Repository for the EinsteinPy core package :rocket:", "topics": [ - "bioinformatics-analysis", - "heteroplasmy", - "open-source", - "rstats-package" + "gravitational-physics", + "orbital-simulation", + "perihelion", + "space-physics", + "general-relativity", + "geodesics" ] }, { - "uid": "github/twinl/website", - "url": "https://github.com/twinl/website", - "rel": "/software/repository/github/twinl/website", - "avatar": "https://avatars2.githubusercontent.com/u/33551224?v=4", - "description": "TwiNL: website code", + "uid": "github/YinanZhao21/SOAP_GPU", + "url": "https://github.com/YinanZhao21/SOAP_GPU", + "rel": "/software/repository/github/YinanZhao21/SOAP_GPU", + "avatar": "https://avatars.githubusercontent.com/u/104948851?v=4", + "description": null, "topics": [] }, { - "uid": "github/bethgelab/foolbox", - "url": "https://github.com/bethgelab/foolbox", - "rel": "/software/repository/github/bethgelab/foolbox", - "avatar": "https://avatars2.githubusercontent.com/u/7590370?v=4", - "description": "A Python toolbox to create adversarial examples that fool neural networks in PyTorch, TensorFlow, and JAX", + "uid": "github/opengeos/geoai", + "url": "https://github.com/opengeos/geoai", + "rel": "/software/repository/github/opengeos/geoai", + "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", + "description": "GeoAI: Artificial Intelligence for Geospatial Data", "topics": [ - "adversarial-examples", - "machine-learning", + "ai", + "data-science", + "geoai", + "geopython", + "geospatial", + "jupyter", "python", - "adversarial-attacks", + "deep-learning", + "earth-observation", "pytorch", - "tensorflow", - "jax", - "keras" + "remote-sensing", + "segmentation" ] }, { - "uid": "github/UCL/rmcmc", - "url": "https://github.com/UCL/rmcmc", - "rel": "/software/repository/github/UCL/rmcmc", - "avatar": "https://avatars.githubusercontent.com/u/2951150?v=4", - "description": "Robust Markov chain Monte Carlo methods in R", + "uid": "github/opengeos/segment-geospatial", + "url": "https://github.com/opengeos/segment-geospatial", + "rel": "/software/repository/github/opengeos/segment-geospatial", + "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", + "description": "A Python package for segmenting geospatial data with the Segment Anything Model (SAM)", "topics": [ - "approximate-inference", - "mcmc", - "r" + "artificial-intelligence", + "deep-learning", + "machine-learning", + "segmentation", + "geopython", + "geospatial", + "segment-anything" ] }, { - "uid": "github/VU-IVM/VineCopulas", - "url": "https://github.com/VU-IVM/VineCopulas", - "rel": "/software/repository/github/VU-IVM/VineCopulas", - "avatar": "https://avatars.githubusercontent.com/u/56406868?v=4", - "description": "A pure python implementation for vine copulas", - "topics": [] + "uid": "github/opengeos/HyperCoast", + "url": "https://github.com/opengeos/HyperCoast", + "rel": "/software/repository/github/opengeos/HyperCoast", + "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", + "description": "A Python Package for Visualizing and Analyzing Hyperspectral Data in Coastal Environments", + "topics": [ + "coastal", + "geospatial", + "hyperspectral", + "python", + "nasa", + "aviris", + "emit", + "ipyleaflet", + "ipywidgets", + "leafmap", + "neon", + "pace" + ] }, { - "uid": "github/UK-Digital-Heart-Project/4Dsurvival", - "url": "https://github.com/UK-Digital-Heart-Project/4Dsurvival", - "rel": "/software/repository/github/UK-Digital-Heart-Project/4Dsurvival", - "avatar": "https://avatars.githubusercontent.com/u/13782814?v=4", - "description": "Deep learning cardiac motion analysis for survival prediction", + "uid": "github/liulab-dfci/TRUST4", + "url": "https://github.com/liulab-dfci/TRUST4", + "rel": "/software/repository/github/liulab-dfci/TRUST4", + "avatar": "https://avatars.githubusercontent.com/u/52803964?v=4", + "description": "TCR and BCR assembly from RNA-seq data", "topics": [] }, { - "uid": "github/UK-Digital-Heart-Project/4Dsegment", - "url": "https://github.com/UK-Digital-Heart-Project/4Dsegment", - "rel": "/software/repository/github/UK-Digital-Heart-Project/4Dsegment", - "avatar": "https://avatars.githubusercontent.com/u/13782814?v=4", - "description": null, + "uid": "github/Jonathanfreundlich/CuspCore", + "url": "https://github.com/Jonathanfreundlich/CuspCore", + "rel": "/software/repository/github/Jonathanfreundlich/CuspCore", + "avatar": "https://avatars.githubusercontent.com/u/51839232?v=4", + "description": "A model for core formation in dark matter haloes and ultra-diffuse galaxies by outflow episodes", + "topics": [ + "galaxies", + "dark-matter", + "dark-matter-halos", + "feedback", + "galaxy-formation", + "galaxy-evolution" + ] + }, + { + "uid": "github/PaulSt/NGSTrefftz", + "url": "https://github.com/PaulSt/NGSTrefftz", + "rel": "/software/repository/github/PaulSt/NGSTrefftz", + "avatar": "https://avatars.githubusercontent.com/u/28690104?v=4", + "description": "Add-On to NGSolve for Trefftz methods", + "topics": [ + "numerical-methods", + "finite-element-method", + "trefftz-methods", + "open-source" + ] + }, + { + "uid": "github/mdruett/COCOPLOT", + "url": "https://github.com/mdruett/COCOPLOT", + "rel": "/software/repository/github/mdruett/COCOPLOT", + "avatar": "https://avatars.githubusercontent.com/u/42343001?v=4", + "description": "COlor COllapsed PLOTting quick-look and context image software is designed to convey spectral profile information from all of the spatial pixels in a 3D datacube as a single image, using color.", "topics": [] }, { - "uid": "github/bootphon/phonemizer", - "url": "https://github.com/bootphon/phonemizer", - "rel": "/software/repository/github/bootphon/phonemizer", - "avatar": "https://avatars.githubusercontent.com/u/6418875?v=4", - "description": "Simple text to phones converter for multiple languages", + "uid": "github/theia-dev/Qiber3D", + "url": "https://github.com/theia-dev/Qiber3D", + "rel": "/software/repository/github/theia-dev/Qiber3D", + "avatar": "https://avatars.githubusercontent.com/u/53050231?v=4", + "description": "Automated quantification of fibrous networks", "topics": [] }, { - "uid": "github/BonsonW/slow5curl", - "url": "https://github.com/BonsonW/slow5curl", - "rel": "/software/repository/github/BonsonW/slow5curl", - "avatar": "https://avatars.githubusercontent.com/u/57890355?v=4", - "description": "A library and tool for accessing remote BLOW5 files.", - "topics": [ - "api", - "c", - "fetching-data-from-server", - "library", - "slow5", - "tool", - "blow5", - "command-line-tool", - "curl" - ] + "uid": "github/LondonBiofoundry/basicsynbio", + "url": "https://github.com/LondonBiofoundry/basicsynbio", + "rel": "/software/repository/github/LondonBiofoundry/basicsynbio", + "avatar": "https://avatars.githubusercontent.com/u/61753978?v=4", + "description": "An open-source Python package to facilitate BASIC DNA Assembly workflows", + "topics": [] }, { - "uid": "github/bwkeller/PASTA", - "url": "https://github.com/bwkeller/PASTA", - "rel": "/software/repository/github/bwkeller/PASTA", - "avatar": "https://avatars.githubusercontent.com/u/935082?v=4", - "description": "Python Astronomical Stacking Tool Array", + "uid": "github/bcerutti/Zeltron-code", + "url": "https://github.com/bcerutti/Zeltron-code", + "rel": "/software/repository/github/bcerutti/Zeltron-code", + "avatar": "https://avatars.githubusercontent.com/u/39200874?v=4", + "description": null, "topics": [] }, { - "uid": "github/astroCV/astroCV", - "url": "https://github.com/astroCV/astroCV", - "rel": "/software/repository/github/astroCV/astroCV", - "avatar": "https://avatars.githubusercontent.com/u/29994772?v=4", - "description": "Computer Vision library for Astronomy", - "topics": [ - "computer-vision", - "image-processing", - "astronomy", - "lsst" - ] + "uid": "github/pierfied/karmma", + "url": "https://github.com/pierfied/karmma", + "rel": "/software/repository/github/pierfied/karmma", + "avatar": "https://avatars.githubusercontent.com/u/6539506?v=4", + "description": "KaRMMa - Kappa Reconstruction for Mass Mapping", + "topics": [] }, { - "uid": "github/ptriska/WavesDash", - "url": "https://github.com/ptriska/WavesDash", - "rel": "/software/repository/github/ptriska/WavesDash", - "avatar": "https://avatars.githubusercontent.com/u/45852775?v=4", - "description": "A web application for visualization of wastewater sequencing results", + "uid": "github/iobio-zjut/IPTDFold", + "url": "https://github.com/iobio-zjut/IPTDFold", + "rel": "/software/repository/github/iobio-zjut/IPTDFold", + "avatar": "https://avatars.githubusercontent.com/u/43274315?v=4", + "description": "A de novo protein structure prediction by iterative partition sampling, topology adjustment, and residue-level distance deviation optimization", "topics": [] }, { - "uid": "github/AMICI-dev/AMICI", - "url": "https://github.com/AMICI-dev/AMICI", - "rel": "/software/repository/github/AMICI-dev/AMICI", - "avatar": "https://avatars.githubusercontent.com/u/68919097?v=4", - "description": "Advanced Multilanguage Interface to CVODES and IDAS", - "topics": [ - "differentialequations", - "sensitivities", - "simulation", - "adjoint-sensitivities", - "forward-sensitivities", - "sbml", - "systemsbiology", - "cvode", - "python", - "kinetic-modeling", - "mechanistic-models", - "sensitivity-analysis", - "cvodes", - "idas", - "pysb", - "petab", - "ode", - "parameter-estimation", - "hacktoberfest", - "modeling" - ] + "uid": "github/andrewmoore73/SourceDetect", + "url": "https://github.com/andrewmoore73/SourceDetect", + "rel": "/software/repository/github/andrewmoore73/SourceDetect", + "avatar": "https://avatars.githubusercontent.com/u/95614601?v=4", + "description": "CNN based event search for TESS data", + "topics": [] }, { - "uid": "github/cadet/CADET-Core", - "url": "https://github.com/cadet/CADET-Core", - "rel": "/software/repository/github/cadet/CADET-Core", - "avatar": "https://avatars.githubusercontent.com/u/68232670?v=4", - "description": "The heart of CADET. A modular, fast, and accurate modeling and simulation framework for biotechnology processes.", + "uid": "github/ChenfuShi/HiChIP_peaks", + "url": "https://github.com/ChenfuShi/HiChIP_peaks", + "rel": "/software/repository/github/ChenfuShi/HiChIP_peaks", + "avatar": "https://avatars.githubusercontent.com/u/40122452?v=4", + "description": "A tool to analyse HiChIP data", "topics": [ - "chromatography", - "chromatography-analysis", - "simulator", - "general-rate-model", - "cadet" + "bioinformatics", + "bioinformatics-tool", + "hichip" ] }, { - "uid": "github/open-aviation/tangram", - "url": "https://github.com/open-aviation/tangram", - "rel": "/software/repository/github/open-aviation/tangram", - "avatar": "https://avatars.githubusercontent.com/u/104085040?v=4", - "description": "An open platform for modular, real-time aviation research", + "uid": "github/tongzhouxu/mashpit", + "url": "https://github.com/tongzhouxu/mashpit", + "rel": "/software/repository/github/tongzhouxu/mashpit", + "avatar": "https://avatars.githubusercontent.com/u/55856334?v=4", + "description": ":pencil: Sketch-based surveillance platform", "topics": [] }, { - "uid": "github/CSSEGISandData/COVID-19", - "url": "https://github.com/CSSEGISandData/COVID-19", - "rel": "/software/repository/github/CSSEGISandData/COVID-19", - "avatar": "https://avatars.githubusercontent.com/u/60674295?v=4", - "description": "Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE", + "uid": "github/aabdurrouf/piXedfit", + "url": "https://github.com/aabdurrouf/piXedfit", + "rel": "/software/repository/github/aabdurrouf/piXedfit", + "avatar": "https://avatars.githubusercontent.com/u/45021817?v=4", + "description": "piXedfit is a Python package designed for analyzing spatially resolved SEDs of galaxies ", "topics": [ - "johns-hopkins-university", - "systems-science", - "engineering", - "covid-19", - "2019-ncov", - "coronavirus", - "csse", - "jhu" + "astrophysics", + "galaxies", + "astronomical-images", + "astronomical-spectroscopy", + "pixel-binning", + "sed-fitting" ] }, { - "uid": "github/siara-cc/Unishox2", - "url": "https://github.com/siara-cc/Unishox2", - "rel": "/software/repository/github/siara-cc/Unishox2", - "avatar": "https://avatars.githubusercontent.com/u/12986780?v=4", - "description": "Guaranteed compression for Unicode short strings", - "topics": [ - "compression", - "arduino", - "string-compression-algorithms", - "string-compression", - "database-compression", - "iot", - "short-string", - "json-compression", - "xml-compression", - "cost-optimization", - "bandwidth-saver", - "storage-saving", - "cloud-cost-intelligence" + "uid": "github/tao-bioinfo/MiFish", + "url": "https://github.com/tao-bioinfo/MiFish", + "rel": "/software/repository/github/tao-bioinfo/MiFish", + "avatar": "https://avatars.githubusercontent.com/u/1146090?v=4", + "description": "This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers", + "topics": [ + "edna", + "edna-pipeline" ] }, { - "uid": "github/Lyalpha/spalipy", - "url": "https://github.com/Lyalpha/spalipy", - "rel": "/software/repository/github/Lyalpha/spalipy", - "avatar": "https://avatars.githubusercontent.com/u/12103194?v=4", - "description": "Detection-based astronomical image registration.", + "uid": "github/wasserman-group/pyCADMium", + "url": "https://github.com/wasserman-group/pyCADMium", + "rel": "/software/repository/github/wasserman-group/pyCADMium", + "avatar": "https://avatars.githubusercontent.com/u/54595041?v=4", + "description": "Solve the Kohn-Sham equations on a prolate spheroidal grid. ", "topics": [] }, { - "uid": "github/simple-crypto/SCALib", - "url": "https://github.com/simple-crypto/SCALib", - "rel": "/software/repository/github/simple-crypto/SCALib", - "avatar": "https://avatars.githubusercontent.com/u/82374905?v=4", - "description": "Side-Channel Analysis Library", + "uid": "github/cheng-zhao/FCFC", + "url": "https://github.com/cheng-zhao/FCFC", + "rel": "/software/repository/github/cheng-zhao/FCFC", + "avatar": "https://avatars.githubusercontent.com/u/13256863?v=4", + "description": "Fast Correlation Function Calculator", + "topics": [ + "correlation-function", + "cosmology", + "large-scale-structure-cosmology", + "galaxy-clustering", + "pair-counting", + "radial-distribution-function", + "pair-correlation-function" + ] + }, + { + "uid": "github/CajoterBraak/demc2", + "url": "https://github.com/CajoterBraak/demc2", + "rel": "/software/repository/github/CajoterBraak/demc2", + "avatar": "https://avatars.githubusercontent.com/u/12693502?v=4", + "description": "Differential Evolution Markov Chain parameter estimation", "topics": [] }, { - "uid": "github/uw-comphys/openccm", - "url": "https://github.com/uw-comphys/openccm", - "rel": "/software/repository/github/uw-comphys/openccm", - "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", - "description": "OpenCCM is a CFD-based compartment modelling software package. It is primarily intended for convection dominated reactive flows which feature a weak or one-way coupling between the reactive species and the carrier fluid, i.e. the reaction does not substantially influence the fluid flow over the course of the simulation. ", + "uid": "github/saltastro/pyhrs", + "url": "https://github.com/saltastro/pyhrs", + "rel": "/software/repository/github/saltastro/pyhrs", + "avatar": "https://avatars.githubusercontent.com/u/736730?v=4", + "description": "Software for reducing observations from the SALT High Resolution Spectrograph", "topics": [] }, { - "uid": "github/uw-comphys/shapelets", - "url": "https://github.com/uw-comphys/shapelets", - "rel": "/software/repository/github/uw-comphys/shapelets", - "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", - "description": "shapelets is a python package that implements several shapelet functions and some of their significant applications in science and astronomy.", + "uid": "github/DICP1810/ComMap", + "url": "https://github.com/DICP1810/ComMap", + "rel": "/software/repository/github/DICP1810/ComMap", + "avatar": "https://avatars.githubusercontent.com/u/46855251?v=4", + "description": "CXMS generated cross-linking pairs mapping to structures", "topics": [] }, { - "uid": "github/uw-comphys/opencmp", - "url": "https://github.com/uw-comphys/opencmp", - "rel": "/software/repository/github/uw-comphys/opencmp", - "avatar": "https://avatars.githubusercontent.com/u/81441154?v=4", - "description": "OpenCMP is a computational multiphysics software package based on the finite element method. It is primarily intended for physicochemical processes involving significant convective flow.", - "topics": [ - "finite-element-methods", - "computational-fluid-dynamics", - "simulation", - "modeling" - ] + "uid": "github/DICP1810/SpotLink", + "url": "https://github.com/DICP1810/SpotLink", + "rel": "/software/repository/github/DICP1810/SpotLink", + "avatar": "https://avatars.githubusercontent.com/u/46855251?v=4", + "description": "SpotLinkTest", + "topics": [] }, { - "uid": "github/changliao1025/pyflowline", - "url": "https://github.com/changliao1025/pyflowline", - "rel": "/software/repository/github/changliao1025/pyflowline", - "avatar": "https://avatars.githubusercontent.com/u/20618384?v=4", - "description": "A mesh independent river network generator for hydrologic models", - "topics": [ - "hydrology", - "gis", - "river", - "graph", - "earth-system-model" - ] + "uid": "github/valboz/VBMicroLensing", + "url": "https://github.com/valboz/VBMicrolensing", + "rel": "/software/repository/github/valboz/VBMicroLensing", + "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", + "description": "Microlensing computation code, including single, binary and multiple lenses", + "topics": [] }, { - "uid": "github/lisadang27/SPCA", - "url": "https://github.com/lisadang27/SPCA", - "rel": "/software/repository/github/lisadang27/SPCA", - "avatar": "https://avatars.githubusercontent.com/u/17075772?v=4", - "description": "Spitzer Phase Curve Analysis", + "uid": "github/valboz/VBBinaryLensing", + "url": "https://github.com/valboz/VBBinaryLensing", + "rel": "/software/repository/github/valboz/VBBinaryLensing", + "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", + "description": "Microlensing light curve calculation", "topics": [] }, { - "uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", - "url": "https://github.com/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", - "rel": "/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", - "avatar": "https://avatars.githubusercontent.com/u/120310498?v=4", - "description": null, + "uid": "github/valboz/RTModel", + "url": "https://github.com/valboz/RTModel", + "rel": "/software/repository/github/valboz/RTModel", + "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", + "description": "Microlensing modeling: fast and efficient exploration of the parameter space", "topics": [] }, { - "uid": "github/cosmo-epfl/chemiscope", - "url": "https://github.com/cosmo-epfl/chemiscope", - "rel": "/software/repository/github/cosmo-epfl/chemiscope", - "avatar": "https://avatars0.githubusercontent.com/u/7110305?v=4", - "description": "An interactive structure/property explorer for materials and molecules", + "uid": "github/BackmanLab/PWSpy", + "url": "https://github.com/BackmanLab/PWSpy", + "rel": "/software/repository/github/BackmanLab/PWSpy", + "avatar": "https://avatars.githubusercontent.com/u/68033654?v=4", + "description": "A Python library dedicated to the analysis of Partial Wave Microscopy (PWS) data.", "topics": [] }, { - "uid": "github/hdeeg/KvW", - "url": "https://github.com/hdeeg/KvW", - "rel": "/software/repository/github/hdeeg/KvW", - "avatar": "https://avatars.githubusercontent.com/u/28144968?v=4", - "description": "Kwee Van Woerden algorithm for eclipse or transit minimum timing, with improved error calculation", + "uid": "github/rgmyr/corebreakout", + "url": "https://github.com/rgmyr/corebreakout", + "rel": "/software/repository/github/rgmyr/corebreakout", + "avatar": "https://avatars1.githubusercontent.com/u/31017405?v=4", + "description": "Segmentation and depth-alignment of geological core sample image columns via Mask-RCNN", "topics": [] }, { - "uid": "github/AWehrhahn/SME", - "url": "https://github.com/AWehrhahn/SME", - "rel": "/software/repository/github/AWehrhahn/SME", - "avatar": "https://avatars.githubusercontent.com/u/31626864?v=4", - "description": "Spectroscopy Made Easy", + "uid": "github/gnuradio/gnuradio", + "url": "https://github.com/gnuradio/gnuradio", + "rel": "/software/repository/github/gnuradio/gnuradio", + "avatar": "https://avatars.githubusercontent.com/u/1278659?v=4", + "description": "GNU Radio \u2013 the Free and Open Software Radio Ecosystem", "topics": [ - "astronomy", - "spectroscopy", - "modelling" + "sdr", + "dsp", + "wireless", + "cybersecurity", + "c-plus-plus", + "python", + "gnu", + "radio", + "gnuradio", + "hacktoberfest" ] }, { - "uid": "github/sing-group/seda", - "url": "https://github.com/sing-group/seda", - "rel": "/software/repository/github/sing-group/seda", - "avatar": "https://avatars.githubusercontent.com/u/12700493?v=4", - "description": "SEquence DAtaset builder", - "topics": [ - "sequences", - "fasta", - "fasta-sequences", - "bioinformatics", - "java", - "sequence-dataset-builder" - ] + "uid": "github/YongyiLuo98/BVSim", + "url": "https://github.com/YongyiLuo98/BVSim", + "rel": "/software/repository/github/YongyiLuo98/BVSim", + "avatar": "https://avatars.githubusercontent.com/u/128009982?v=4", + "description": "BVSim: A Benchmarking Variation Simulator Mimicking Human Variation Spectrum", + "topics": [] }, { - "uid": "github/sing-group/my-brain-seq", - "url": "https://github.com/sing-group/my-brain-seq", - "rel": "/software/repository/github/sing-group/my-brain-seq", - "avatar": "https://avatars.githubusercontent.com/u/12700493?v=4", - "description": "myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry", - "topics": [ - "differential-expression", - "docker", - "mirna", - "mirna-seq", - "compi", - "pipeline" - ] + "uid": "github/Kkritos/Rapster", + "url": "https://github.com/Kkritos/Rapster", + "rel": "/software/repository/github/Kkritos/Rapster", + "avatar": "https://avatars.githubusercontent.com/u/82104258?v=4", + "description": "Rapid population synthesis code for binary black hole mergers in dynamical environments.", + "topics": [] }, { - "uid": "github/goualard-f/MicroFloatingPoints.jl", - "url": "https://github.com/goualard-f/MicroFloatingPoints.jl", - "rel": "/software/repository/github/goualard-f/MicroFloatingPoints.jl", - "avatar": "https://avatars.githubusercontent.com/u/26631692?v=4", - "description": "A Julia package to manipulate very small IEEE 754 standard-compliant floating-point numbers.", + "uid": "github/spyder-ide/spyder", + "url": "https://github.com/spyder-ide/spyder", + "rel": "/software/repository/github/spyder-ide/spyder", + "avatar": "https://avatars1.githubusercontent.com/u/1284937?v=4", + "description": "Official repository for Spyder - The Scientific Python Development Environment", "topics": [ - "floating-point", - "ieee-754" + "spyder", + "python", + "pyqt5", + "anaconda", + "anaconda-distribution", + "winpython", + "qt" ] }, { - "uid": "github/gacou54/pyorthanc", - "url": "https://github.com/gacou54/pyorthanc", - "rel": "/software/repository/github/gacou54/pyorthanc", - "avatar": "https://avatars.githubusercontent.com/u/25424166?v=4", - "description": "Python library that wrap the Orthanc REST API and facilitate the manipulation of data in Orthanc", - "topics": [] - }, - { - "uid": "github/vsulis5357/Sonification", - "url": "https://github.com/vsulis5357/Sonification", - "rel": "/software/repository/github/vsulis5357/Sonification", - "avatar": "https://avatars.githubusercontent.com/u/173300234?v=4", - "description": null, + "uid": "github/FrdCHK/serial-MultiView", + "url": "https://github.com/FrdCHK/serial-MultiView", + "rel": "/software/repository/github/FrdCHK/serial-MultiView", + "avatar": "https://avatars.githubusercontent.com/u/43998364?v=4", + "description": "Python scripts for serial-MultiView developed by Jingdong Zhang, Shanghai Astronomical Observatory, June 2024.", "topics": [] }, { - "uid": "github/mariapetro/LeHaMoC", - "url": "https://github.com/mariapetro/LeHaMoC", - "rel": "/software/repository/github/mariapetro/LeHaMoC", - "avatar": "https://avatars.githubusercontent.com/u/34586264?v=4", - "description": "Leptonic-Hadronic Modeling Code for High-Energy Astrophysical Sources", + "uid": "github/duetosymmetry/qnm", + "url": "https://github.com/duetosymmetry/qnm", + "rel": "/software/repository/github/duetosymmetry/qnm", + "avatar": "https://avatars.githubusercontent.com/u/679461?v=4", + "description": "Python package for computing Kerr quasinormal mode frequencies, separation constants, and spherical-spheroidal mixing coefficients", "topics": [ - "simulation" + "python", + "scientific-computing", + "numerical-methods", + "physics", + "black-holes", + "general-relativity" ] }, { - "uid": "github/wustat/rjaf", - "url": "https://github.com/wustat/rjaf", - "rel": "/software/repository/github/wustat/rjaf", - "avatar": "https://avatars.githubusercontent.com/u/19987326?v=4", - "description": "Regularized Joint Assignment Forest with Treatment Arm Clustering", - "topics": [ - "causal-inference", - "machine-learning" - ] + "uid": "github/SoSongzhi/PVGA", + "url": "https://github.com/SoSongzhi/PVGA", + "rel": "/software/repository/github/SoSongzhi/PVGA", + "avatar": "https://avatars.githubusercontent.com/u/74604653?v=4", + "description": null, + "topics": [] }, { - "uid": "github/khowe/quicktree", - "url": "https://github.com/khowe/quicktree", - "rel": "/software/repository/github/khowe/quicktree", - "avatar": "https://avatars.githubusercontent.com/u/708483?v=4", - "description": "Fast implementation of the neighbour-joining phylogenetic inference method", + "uid": "github/ParaFly/ParaFly", + "url": "https://github.com/ParaFly/ParaFly", + "rel": "/software/repository/github/ParaFly/ParaFly", + "avatar": "https://avatars.githubusercontent.com/u/31590597?v=4", + "description": "ParaFly - parallel cmd processing utility", "topics": [] }, { - "uid": "github/khowe/quick", - "url": null, - "rel": "/software/repository/github/khowe/quick", - "avatar": "", - "description": "an efficient implementation of the Neighbor-Joining algorithm.", + "uid": "github/multiply-org/sar-pre-processing", + "url": "https://github.com/multiply-org/sar-pre-processing", + "rel": "/software/repository/github/multiply-org/sar-pre-processing", + "avatar": "https://avatars.githubusercontent.com/u/22216958?v=4", + "description": "This is the MULTIPLY repository containing the functionality for SAR pre processing.", "topics": [] }, { - "uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", - "url": "https://github.com/mengyao/Complete-Striped-Smith-Waterman-Library", - "rel": "/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", - "avatar": "https://avatars.githubusercontent.com/u/611700?v=4", - "description": "Smith-Waterman aligner based on libssw", + "uid": "github/patkel/big-macs-calibrate", + "url": "https://github.com/patkel/big-macs-calibrate", + "rel": "/software/repository/github/patkel/big-macs-calibrate", + "avatar": "https://avatars.githubusercontent.com/u/5139900?v=4", + "description": "Automatically exported from code.google.com/p/big-macs-calibrate", "topics": [] }, { - "uid": "github/kavonrtep/dante", - "url": "https://github.com/kavonrtep/dante", - "rel": "/software/repository/github/kavonrtep/dante", - "avatar": "https://avatars2.githubusercontent.com/u/8256626?v=4", - "description": "Domain based annotation of transposable elements ", + "uid": "github/amerand/PMOIRED", + "url": "https://github.com/amerand/PMOIRED", + "rel": "/software/repository/github/amerand/PMOIRED", + "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", + "description": "Display and fit Optical (spectro-)Interferometric OIFITS data ", "topics": [] }, { - "uid": "github/cgobat/asymmetric_uncertainty", - "url": "https://github.com/cgobat/asymmetric_uncertainty", - "rel": "/software/repository/github/cgobat/asymmetric_uncertainty", - "avatar": "https://avatars.githubusercontent.com/u/36030084?v=4", - "description": "A package that implements a class to represent numeric quantities with asymmetric uncertainties.", - "topics": [ - "uncertainty-propagation", - "asymmetric-uncertainties", - "error-propagation", - "python" - ] + "uid": "github/amerand/SPIPS", + "url": "https://github.com/amerand/SPIPS", + "rel": "/software/repository/github/amerand/SPIPS", + "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", + "description": "Spectro-Photo-Interferometry of Pulsating Stars", + "topics": [] }, { - "uid": "github/juliotux/astropop", - "url": "https://github.com/juliotux/astropop", - "rel": "/software/repository/github/juliotux/astropop", - "avatar": "https://avatars.githubusercontent.com/u/497246?v=4", - "description": "The (non) famous ASTROnomical POlarimetry and Photometry pipeline", - "topics": [ - "photometry", - "pipeline", - "photometry-pipeline", - "scipy", - "astropy-affiliated", - "astrometry", - "astronomy", - "polarimetry" - ] + "uid": "github/amerand/CANDID", + "url": "https://github.com/amerand/CANDID", + "rel": "/software/repository/github/amerand/CANDID", + "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", + "description": "Companion Analysis and Non-Detection in Interferometric Data", + "topics": [] }, { - "uid": "github/COINtoolbox/CosmoPhotoz", - "url": "https://github.com/COINtoolbox/CosmoPhotoz", - "rel": "/software/repository/github/COINtoolbox/CosmoPhotoz", - "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", - "description": "Photometric redshift estimator utilising Generalized Linear Models.", + "uid": "github/johannes-titz/cofad", + "url": "https://github.com/johannes-titz/cofad", + "rel": "/software/repository/github/johannes-titz/cofad", + "avatar": "https://avatars.githubusercontent.com/u/32065313?v=4", + "description": null, "topics": [] }, { - "uid": "github/COINtoolbox/ActSNClass", - "url": "https://github.com/COINtoolbox/ActSNClass", - "rel": "/software/repository/github/COINtoolbox/ActSNClass", - "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", - "description": "Active Learning for SN photometric classification", + "uid": "github/seamusclarke/rjplots", + "url": "https://github.com/SeamusClarke/RJplots", + "rel": "/software/repository/github/seamusclarke/rjplots", + "avatar": "https://avatars.githubusercontent.com/u/34774908?v=4", + "description": "A Python package allowing for the automated and objective classification of 2D structures using a moments of inertia based method. This method is a further development of J-plots (https://github.com/SJaffa/Jplots)", "topics": [] }, { - "uid": "github/COINtoolbox/DRACULA", - "url": "https://github.com/COINtoolbox/DRACULA", - "rel": "/software/repository/github/COINtoolbox/DRACULA", - "avatar": "https://avatars.githubusercontent.com/u/8449310?v=4", - "description": null, + "uid": "github/LucyMcGowan/tipr", + "url": "https://github.com/LucyMcGowan/tipr", + "rel": "/software/repository/github/LucyMcGowan/tipr", + "avatar": "https://avatars.githubusercontent.com/u/8431897?v=4", + "description": "An R package for conducting sensitivity analyses for unmeasured confounders", + "topics": [] + }, + { + "uid": "github/plumed/plumed2", + "url": "https://github.com/plumed/plumed2", + "rel": "/software/repository/github/plumed/plumed2", + "avatar": "https://avatars.githubusercontent.com/u/4379652?v=4", + "description": "Development version of plumed 2", "topics": [ - "dimensionality-reduction", - "clustering", - "clustering-methods", - "spectra", - "som" + "molecular-dynamics", + "plugin", + "c-plus-plus", + "plumed", + "free-energy", + "plumed2", + "enhanced-sampling", + "trajectory-analysis" ] }, { - "uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", - "url": "https://github.com/semiautomaticgit/SemiAutomaticClassificationPlugin", - "rel": "/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", - "avatar": "https://avatars.githubusercontent.com/u/7038696?v=4", - "description": null, + "uid": "github/fstrozzi/Fastool", + "url": "https://github.com/fstrozzi/Fastool", + "rel": "/software/repository/github/fstrozzi/Fastool", + "avatar": "https://avatars.githubusercontent.com/u/16617?v=4", + "description": "Simple and quick FastQ and FastA tool for file reading and conversion", "topics": [] }, { - "uid": "github/mggg/ecological-inference", - "url": "https://github.com/mggg/ecological-inference", - "rel": "/software/repository/github/mggg/ecological-inference", - "avatar": "https://avatars.githubusercontent.com/u/42822281?v=4", - "description": null, + "uid": "github/jeffcsauer/arcos_arcospy_information", + "url": "https://github.com/jeffcsauer/arcos_arcospy_information", + "rel": "/software/repository/github/jeffcsauer/arcos_arcospy_information", + "avatar": "https://avatars2.githubusercontent.com/u/31426294?v=4", + "description": "This is an informational landing page for the R arcos and Python arcospy software", "topics": [] }, { - "uid": "github/mggg/votekit", - "url": "https://github.com/mggg/VoteKit", - "rel": "/software/repository/github/mggg/votekit", - "avatar": "https://avatars.githubusercontent.com/u/42822281?v=4", - "description": "A Swiss Army Knife for computational social choice research", + "uid": "github/barentsen/k2flix", + "url": "https://github.com/barentsen/k2flix", + "rel": "/software/repository/github/barentsen/k2flix", + "avatar": "https://avatars.githubusercontent.com/u/817669?v=4", + "description": "Create beautiful quicklook movies from the pixel data observed by NASA's Kepler/K2/TESS spacecraft.", "topics": [] }, { - "uid": "github/musevlt/muse-psfr", - "url": "https://github.com/musevlt/muse-psfr", - "rel": "/software/repository/github/musevlt/muse-psfr", - "avatar": "https://avatars.githubusercontent.com/u/28007568?v=4", - "description": "MUSE-PSFR - PSF reconstruction for MUSE WFM-AO", - "topics": [ - "python", - "astronomy", - "astrophysics", - "musevlt", - "adaptive-optics" - ] - }, - { - "uid": "github/musevlt/origin", - "url": "https://github.com/musevlt/origin", - "rel": "/software/repository/github/musevlt/origin", - "avatar": "https://avatars.githubusercontent.com/u/28007568?v=4", - "description": "ORIGIN: detectiOn and extRactIon of Galaxy emIssion liNes", - "topics": [ - "python", - "astronomy", - "astrophysics", - "source-detection", - "musevlt" - ] + "uid": "github/barentsen/dave", + "url": "https://github.com/barentsen/dave", + "rel": "/software/repository/github/barentsen/dave", + "avatar": "https://avatars.githubusercontent.com/u/817669?v=4", + "description": "Discovery And Vetting of K2 Exoplanets", + "topics": [] }, { - "uid": "github/mjoppich/bioGUItools", - "url": "https://github.com/mjoppich/bioGUItools", - "rel": "/software/repository/github/mjoppich/bioGUItools", - "avatar": "https://avatars0.githubusercontent.com/u/1136125?v=4", - "description": "Tools for bioGUI (e.g. CWL Parser/argparse2biogui/...)", + "uid": "github/xfangcosmo/FFTLog-and-beyond", + "url": "https://github.com/xfangcosmo/FFTLog-and-beyond", + "rel": "/software/repository/github/xfangcosmo/FFTLog-and-beyond", + "avatar": "https://avatars.githubusercontent.com/u/15255091?v=4", + "description": "An FFTLog code for efficiently computing integrals containing 1 spherical Bessel function or Bessel function or its 1st/2nd derivative.", "topics": [] }, { - "uid": "github/GalacticDynamics/unxt", - "url": "https://github.com/GalacticDynamics/unxt", - "rel": "/software/repository/github/GalacticDynamics/unxt", - "avatar": "https://avatars.githubusercontent.com/u/150391400?v=4", - "description": "Unitful Quantities in JAX", - "topics": [ - "jax", - "quantities", - "units", - "array", - "auto-differentiation" - ] + "uid": "github/xfangcosmo/2DFFTLog", + "url": "https://github.com/xfangcosmo/2DFFTLog", + "rel": "/software/repository/github/xfangcosmo/2DFFTLog", + "avatar": "https://avatars.githubusercontent.com/u/15255091?v=4", + "description": "2DFFTLog for Covariances from Fourier Space to Real Space", + "topics": [] }, { - "uid": "github/Qile0317/APackOfTheClones", - "url": "https://github.com/Qile0317/APackOfTheClones", - "rel": "/software/repository/github/Qile0317/APackOfTheClones", - "avatar": "https://avatars.githubusercontent.com/u/43093685?v=4", - "description": "Visualize clonal expansion via circle-packing. 'APackOfTheClones' extends 'scRepertoire' to produce a publication-ready visualization of clonal expansion at a single cell resolution, by representing expanded clones as differently sized circles.", - "topics": [ - "clonal-analysis", - "single-cell", - "single-cell-genomics", - "r", - "seurat", - "immune-repertoire", - "immune-system", - "scrna-seq", - "scrnaseq" - ] + "uid": "github/FitSNAP/FitSNAP", + "url": "https://github.com/FitSNAP/FitSNAP", + "rel": "/software/repository/github/FitSNAP/FitSNAP", + "avatar": "https://avatars.githubusercontent.com/u/55246404?v=4", + "description": "Software for generating SNAP machine-learning interatomic potentials", + "topics": [] }, { - "uid": "github/hippalectryon-0/pyloggrid", - "url": "https://github.com/hippalectryon-0/pyloggrid", - "rel": "/software/repository/github/hippalectryon-0/pyloggrid", - "avatar": "https://avatars.githubusercontent.com/u/6502864?v=4", - "description": "Public docs for the python package pyloggrid", + "uid": "github/deepmodeling/DMFF", + "url": "https://github.com/deepmodeling/DMFF", + "rel": "/software/repository/github/deepmodeling/DMFF", + "avatar": "https://avatars.githubusercontent.com/u/32671488?v=4", + "description": "DMFF (Differentiable Molecular Force Field) is a Jax-based python package that provides a full differentiable implementation of molecular force field models. ", "topics": [] }, { - "uid": "github/fastpm/fastpm", - "url": "https://github.com/fastpm/fastpm", - "rel": "/software/repository/github/fastpm/fastpm", - "avatar": "https://avatars.githubusercontent.com/u/69364119?v=4", - "description": "fastPM - A N-body Particle Mesh solver that scales", + "uid": "github/bonsai-team/Porechop_ABI", + "url": "https://github.com/bonsai-team/Porechop_ABI", + "rel": "/software/repository/github/bonsai-team/Porechop_ABI", + "avatar": "https://avatars.githubusercontent.com/u/24830634?v=4", + "description": "Adapter trimmer for Oxford Nanopore reads using ab initio method", "topics": [] }, { - "uid": "github/N-Wouda/ALNS", - "url": "https://github.com/N-Wouda/ALNS", - "rel": "/software/repository/github/N-Wouda/ALNS", - "avatar": "https://avatars.githubusercontent.com/u/16272507?v=4", - "description": "Adaptive large neighbourhood search (and more!) in Python.", + "uid": "github/bonsai-team/matam", + "url": "https://github.com/bonsai-team/matam", + "rel": "/software/repository/github/bonsai-team/matam", + "avatar": "https://avatars.githubusercontent.com/u/24830634?v=4", + "description": "Mapping-Assisted Targeted-Assembly for Metagenomics", "topics": [ - "adaptive-large-neighbourhood-search", - "alns", - "metaheuristic", - "operations-research", - "python", - "travelling-salesman-problem", - "cutting-stock-problem", - "vehicle-routing-problem", - "rcpsp", - "scheduling-problem", - "tsp", - "vrp", - "flow-shop" + "metagenomics", + "assembly", + "bioinformatics", + "rrna" ] }, { - "uid": "github/julianreul/mode_behave", - "url": "https://github.com/julianreul/mode_behave", - "rel": "/software/repository/github/julianreul/mode_behave", - "avatar": "https://avatars.githubusercontent.com/u/42872728?v=4", - "description": "A Python package for estimating mixed logit models with nonparametric distributions", - "topics": [] - }, - { - "uid": "github/biocircuits/bioscrape", - "url": "https://github.com/biocircuits/bioscrape", - "rel": "/software/repository/github/biocircuits/bioscrape", - "avatar": "https://avatars.githubusercontent.com/u/34864391?v=4", - "description": "BioSCRAPE (Bio-circuit Stochastic Single-cell Reaction Analysis and Parameter Estimation)", + "uid": "github/meinardmueller/synctoolbox", + "url": "https://github.com/meinardmueller/synctoolbox", + "rel": "/software/repository/github/meinardmueller/synctoolbox", + "avatar": "https://avatars.githubusercontent.com/u/40728202?v=4", + "description": "Sync Toolbox - Python package with reference implementations for efficient, robust, and accurate music synchronization based on dynamic time warping (DTW)", "topics": [ - "simulation", - "chemical-reaction-networks", - "crn", - "stochastic-simulation-algorithm", + "dtw", "python", - "cython", - "parameter-identification" + "synchronization", + "music", + "chromagram", + "onset" ] }, { - "uid": "github/dzerbino/velvet", - "url": "https://github.com/dzerbino/velvet", - "rel": "/software/repository/github/dzerbino/velvet", - "avatar": "https://avatars.githubusercontent.com/u/33239?v=4", - "description": "Short read de novo assembler using de Bruijn graphs, as published in: D.R. Zerbino and E. Birney. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Research, 18: 821-829", + "uid": "github/meinardmueller/libfmp", + "url": "https://github.com/meinardmueller/libfmp", + "rel": "/software/repository/github/meinardmueller/libfmp", + "avatar": "https://avatars.githubusercontent.com/u/40728202?v=4", + "description": null, "topics": [] }, { - "uid": "github/Zilong-Li/PCAone", - "url": "https://github.com/Zilong-Li/PCAone", - "rel": "/software/repository/github/Zilong-Li/PCAone", - "avatar": "https://avatars.githubusercontent.com/u/11785793?v=4", - "description": "Principal Component Analysis All in One", + "uid": "github/NLeSC/structure-from-motion", + "url": "https://github.com/NLeSC/structure-from-motion", + "rel": "/software/repository/github/NLeSC/structure-from-motion", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Structure from Motion Pipeline", + "topics": [] + }, + { + "uid": "github/NLeSC/xenon-flow", + "url": "https://github.com/xenon-middleware/xenon-flow", + "rel": "/software/repository/github/NLeSC/xenon-flow", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "Run CWL workflows using Xenon", "topics": [ - "bioinformatics", - "population-genetics", - "pca", - "svd", - "scrna-seq", - "ukb" + "xenon", + "cwl", + "workflow", + "java" ] }, { - "uid": "github/rainwoodman/kdcount", - "url": "https://github.com/rainwoodman/kdcount", - "rel": "/software/repository/github/rainwoodman/kdcount", - "avatar": "https://avatars.githubusercontent.com/u/138060?v=4", - "description": "KDTree for low dimensional spatial indexing, a Python extension", + "uid": "github/NLeSC/root-conda-recipes", + "url": "https://github.com/NLeSC/root-conda-recipes", + "rel": "/software/repository/github/NLeSC/root-conda-recipes", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Conda recipes for building ROOT 5 and ROOT 6 binaries, root_numpy, rootpy, root_pandas, with both Python 2 and Python 3 support.", "topics": [] }, { - "uid": "github/rainwoodman/bigfile", - "url": "https://github.com/rainwoodman/bigfile", - "rel": "/software/repository/github/rainwoodman/bigfile", - "avatar": "https://avatars.githubusercontent.com/u/138060?v=4", - "description": "A reproducible massively parallel IO library for hierarchical data", + "uid": "github/NLeSC/SalientDetector-python", + "url": "https://github.com/NLeSC/SalientDetector-python", + "rel": "/software/repository/github/NLeSC/SalientDetector-python", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Python package for Large Scale Imaging research @ NLeSC", "topics": [] }, { - "uid": "github/EMResearch/EvoMaster", - "url": "https://github.com/EMResearch/EvoMaster", - "rel": "/software/repository/github/EMResearch/EvoMaster", - "avatar": "https://avatars2.githubusercontent.com/u/29148026?v=4", - "description": "A tool for automatically generating system-level test cases. Currently targeting REST APIs.", - "topics": [ - "testing", - "evolutionary-algorithms", - "rest", - "java", - "kotlin", - "test-case-generation", - "api-rest", - "api-testing" - ] + "uid": "github/NLeSC/eEcology-SMS-reciever", + "url": "https://github.com/NLeSC/eEcology-SMS-reciever", + "rel": "/software/repository/github/NLeSC/eEcology-SMS-reciever", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Webservice to store SMS messages into a database table", + "topics": [] }, { - "uid": "github/sebastian-zieba/PACMAN", - "url": "https://github.com/sebastian-zieba/PACMAN", - "rel": "/software/repository/github/sebastian-zieba/PACMAN", - "avatar": "https://avatars.githubusercontent.com/u/44154733?v=4", - "description": "PACMAN is a pipeline to reduce and analyze data collected by Hubble Wide Field Camera 3 (HST/WFC3) using either the G102 or G141 grism.", - "topics": [ - "python", - "exoplanets", - "hst", - "astronomy", - "wfc3" - ] + "uid": "github/NLeSC/nlesc-serverless-boilerplate", + "url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", + "rel": "/software/repository/github/NLeSC/nlesc-serverless-boilerplate", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "An AWS amplify boilerplate web application", + "topics": [] }, { - "uid": "github/mneeleman/qubefit", - "url": "https://github.com/mneeleman/qubefit", - "rel": "/software/repository/github/mneeleman/qubefit", - "avatar": "https://avatars.githubusercontent.com/u/10130842?v=4", + "uid": "github/NLeSC/noodles", + "url": "https://github.com/NLeSC/noodles", + "rel": "/software/repository/github/NLeSC/noodles", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Computational workflow engine, making distributed computing in Python easy!", + "topics": [] + }, + { + "uid": "github/NLeSC/eAstroViz", + "url": "https://github.com/NLeSC/eAstroViz", + "rel": "/software/repository/github/NLeSC/eAstroViz", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", "description": null, "topics": [] }, { - "uid": "github/Blosc/c-blosc", - "url": "https://github.com/Blosc/c-blosc", - "rel": "/software/repository/github/Blosc/c-blosc", - "avatar": "https://avatars3.githubusercontent.com/u/6469856?v=4", - "description": "A blocking, shuffling and loss-less compression library that can be faster than `memcpy()`.", + "uid": "github/NLeSC/spot", + "url": "https://github.com/NLeSC/spot", + "rel": "/software/repository/github/NLeSC/spot", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Try the demo", "topics": [ - "c", - "compression", - "fast" + "spot", + "visualization", + "crossfilter", + "javascript", + "cross-platform", + "web-app" ] }, { - "uid": "github/ppsp-team/PyNM", - "url": "https://github.com/ppsp-team/PyNM", - "rel": "/software/repository/github/ppsp-team/PyNM", - "avatar": "https://avatars.githubusercontent.com/u/65951336?v=4", - "description": "Lightweight Python implementation of Normative Modelling", + "uid": "github/NLeSC/ahn-pointcloud-viewer-ws", + "url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", + "rel": "/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Webservice for ahn pointcloud viewer", "topics": [] }, { - "uid": "github/PaulRitsche/DLTrack", - "url": "https://github.com/PaulRitsche/DL_Track_US", - "rel": "/software/repository/github/PaulRitsche/DLTrack", - "avatar": "https://avatars.githubusercontent.com/u/71383228?v=4", - "description": "This repositories contains code for automatic analysis of human lower limb ultrasonography images.", + "uid": "github/NLeSC/docker-couch-admin", + "url": "https://github.com/NLeSC/docker-couch-admin", + "rel": "/software/repository/github/NLeSC/docker-couch-admin", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Configures a web service using angular-schema-form and CouchDB", "topics": [] }, { - "uid": "github/szpiech/selscan", - "url": "https://github.com/szpiech/selscan", - "rel": "/software/repository/github/szpiech/selscan", - "avatar": "https://avatars.githubusercontent.com/u/4237506?v=4", - "description": "Haplotype based scans for selection", + "uid": "github/NLeSC/xtas", + "url": "https://github.com/NLeSC/xtas", + "rel": "/software/repository/github/NLeSC/xtas", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Distributed text analysis suite based on Celery", "topics": [] }, { - "uid": "github/BayraktarLab/cell2location", - "url": "https://github.com/BayraktarLab/cell2location", - "rel": "/software/repository/github/BayraktarLab/cell2location", - "avatar": "https://avatars.githubusercontent.com/u/65139298?v=4", - "description": "Comprehensive mapping of tissue cell architecture via integrated single cell and spatial transcriptomics (cell2location model)", + "uid": "github/NLeSC/compressing-the-sky", + "url": "https://github.com/NLeSC/compressing-the-sky", + "rel": "/software/repository/github/NLeSC/compressing-the-sky", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Compressing the Sky project with CWI DA", "topics": [] }, { - "uid": "github/BoevaLab/FREEC", - "url": "https://github.com/BoevaLab/FREEC", - "rel": "/software/repository/github/BoevaLab/FREEC", - "avatar": "https://avatars.githubusercontent.com/u/20792557?v=4", - "description": "Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data", + "uid": "github/NLeSC/boatswain", + "url": "https://github.com/NLeSC/boatswain", + "rel": "/software/repository/github/NLeSC/boatswain", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "A simple build system for docker images", "topics": [] }, { - "uid": "github/anderslogg/geco", - "url": "https://github.com/anderslogg/geco", - "rel": "/software/repository/github/anderslogg/geco", - "avatar": "https://avatars.githubusercontent.com/u/125354137?v=4", - "description": "A collection of solvers for the Einstein-Vlasov equations", - "topics": [ - "axisymmetric", - "einstein-vlasov", - "fem", - "fenics", - "general-relativity", - "vlasov-poisson" - ] + "uid": "github/NLeSC/PattyData", + "url": "https://github.com/NLeSC/PattyData", + "rel": "/software/repository/github/NLeSC/PattyData", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": null, + "topics": [] }, { - "uid": "github/PGB-LIV/MHCVision", - "url": "https://github.com/PGB-LIV/MHCVision", - "rel": "/software/repository/github/PGB-LIV/MHCVision", - "avatar": "https://avatars.githubusercontent.com/u/22961411?v=4", - "description": "FDR/PEP estimation for MHC-peptide binding prediction", + "uid": "github/NLeSC/pycoeman", + "url": "https://github.com/NLeSC/pycoeman", + "rel": "/software/repository/github/NLeSC/pycoeman", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Python Commands Execution Manager", "topics": [] }, { - "uid": "github/OSeMOSYS/otoole", - "url": "https://github.com/OSeMOSYS/otoole", - "rel": "/software/repository/github/OSeMOSYS/otoole", - "avatar": "https://avatars.githubusercontent.com/u/14215860?v=4", - "description": "OSeMOSYS Tools for Energy", + "uid": "github/NLeSC/litstudy", + "url": "https://github.com/NLeSC/litstudy", + "rel": "/software/repository/github/NLeSC/litstudy", + "avatar": "https://avatars.githubusercontent.com/u/1705862?v=4", + "description": "Using the power of Python and Jupyter notebooks to automate analysis of scientific literature", "topics": [ - "energy", - "osemosys", - "energy-system-modelling", - "energy-system" + "literature-review", + "literature-search", + "literature-review-tool", + "python", + "jupyter", + "systematic-literature-reviews", + "systematic-reviews", + "bibliographics", + "bibliometric-analysis", + "bibliometric-visualization", + "bibliometrics", + "scientometrics" ] }, { - "uid": "github/dirac-institute/asterogap", - "url": "https://github.com/dirac-institute/asterogap", - "rel": "/software/repository/github/dirac-institute/asterogap", - "avatar": "https://avatars.githubusercontent.com/u/26352004?v=4", - "description": "A Bayesian-based Gaussian Process model set to fit sparsely-sampled asteroid light curves.", + "uid": "github/NLeSC/ShiCo", + "url": "https://github.com/NLeSC/ShiCo", + "rel": "/software/repository/github/NLeSC/ShiCo", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Netherlands eScience Center - Shifting Concepts Through Time project", "topics": [] }, { - "uid": "github/PhysiBoSS/PhysiBoSS", - "url": "https://github.com/PhysiBoSS/PhysiBoSS", - "rel": "/software/repository/github/PhysiBoSS/PhysiBoSS", - "avatar": "https://avatars.githubusercontent.com/u/77400927?v=4", - "description": "PhysiBoSS 2.0: a sustainable integration of stochastic Boolean and agent-based modelling frameworks", + "uid": "github/NLeSC/mcfly", + "url": "https://github.com/NLeSC/mcfly", + "rel": "/software/repository/github/NLeSC/mcfly", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "A deep learning tool for time series classification", "topics": [] }, { - "uid": "github/jstjohn/SeqPrep", - "url": "https://github.com/jstjohn/SeqPrep", - "rel": "/software/repository/github/jstjohn/SeqPrep", - "avatar": "https://avatars.githubusercontent.com/u/459014?v=4", - "description": "Tool for stripping adaptors and/or merging paired reads with overlap into single reads.", + "uid": "github/NLeSC/UncertaintyVisualization", + "url": "https://github.com/NLeSC/UncertaintyVisualization", + "rel": "/software/repository/github/NLeSC/UncertaintyVisualization", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": null, "topics": [] }, { - "uid": "github/cjcollin37/IsoFATE", - "url": "https://github.com/cjcollin37/IsoFATE", - "rel": "/software/repository/github/cjcollin37/IsoFATE", - "avatar": "https://avatars.githubusercontent.com/u/63514976?v=4", - "description": "Open source code for the numerical model IsoFATE: Isotopic Fractionation via ATmospheric Escape", + "uid": "github/NLeSC/eEcology-Annotation-WS", + "url": "https://github.com/NLeSC/eEcology-Annotation-WS", + "rel": "/software/repository/github/NLeSC/eEcology-Annotation-WS", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Webservice for eEcology Annotation project.", "topics": [] }, { - "uid": "github/utpal-singh/SAnTex", - "url": "https://github.com/utpal-singh/SAnTex", - "rel": "/software/repository/github/utpal-singh/SAnTex", - "avatar": "https://avatars.githubusercontent.com/u/63436627?v=4", - "description": null, - "topics": [] + "uid": "github/NLeSC/DiVE", + "url": "https://github.com/NLeSC/DiVE", + "rel": "/software/repository/github/NLeSC/DiVE", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "An interactive 3D web viewer of up to million points on one screen that represent data. Provides interaction for viewing high-dimensional data that has been previously embedded in 3D or 2D. Based on graphosaurus.js and three.js. For a Linux release of a complete embedding+visualization pipeline please visit https://github.com/sonjageorgievska/Embed-Dive.", + "topics": [ + "interactive-visualizations", + "3d-data", + "embedded-data", + "web-application", + "manifold-learning", + "non-linear-dimensionality-reduction", + "high-dimensional-data" + ] }, { - "uid": "github/ScionResearch/genomesizeR", - "url": "https://github.com/ScionResearch/genomesizeR", - "rel": "/software/repository/github/ScionResearch/genomesizeR", - "avatar": "https://avatars.githubusercontent.com/u/18411016?v=4", - "description": "R package for genome size prediction", + "uid": "github/NLeSC/pattyvis", + "url": "https://github.com/NLeSC/PattyVis", + "rel": "/software/repository/github/NLeSC/pattyvis", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Webgl pointcloud visualization of the Via Appia based on potree", "topics": [] }, { - "uid": "github/barnesgroupICL/Driftfusion", - "url": "https://github.com/barnesgroupICL/Driftfusion", - "rel": "/software/repository/github/barnesgroupICL/Driftfusion", - "avatar": "https://avatars.githubusercontent.com/u/30349028?v=4", - "description": "An open source drift diffusion code based in MATLAB for simulating solar cells", + "uid": "github/NLeSC/PattyAnalytics", + "url": "https://github.com/NLeSC/PattyAnalytics", + "rel": "/software/repository/github/NLeSC/PattyAnalytics", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Reusable point cloud analytics software. Includes segmentation, registration, file format conversion. ", "topics": [] }, { - "uid": "github/moscibrodzka/ipole", - "url": "https://github.com/moscibrodzka/ipole", - "rel": "/software/repository/github/moscibrodzka/ipole", - "avatar": "https://avatars.githubusercontent.com/u/24761726?v=4", - "description": "ipole (master, originally published), ipole-v2.0 (v2.0 is more compact with additional features). This is the original repository for the ipole code. ", + "uid": "github/NLeSC/esibayes", + "url": "https://github.com/NLeSC/esibayes", + "rel": "/software/repository/github/NLeSC/esibayes", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Optimization and state estimation of dynamic models", "topics": [] }, { - "uid": "github/KiranLDA/PAMLr", - "url": "https://github.com/KiranLDA/PAMLr", - "rel": "/software/repository/github/KiranLDA/PAMLr", - "avatar": "https://avatars.githubusercontent.com/u/15142638?v=4", - "description": "Pressure, Activity, Magnetism and Light data analysis in R", + "uid": "github/NLeSC/cptm", + "url": "https://github.com/NLeSC/cptm", + "rel": "/software/repository/github/NLeSC/cptm", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Cross-Perspective Topic Modeling", "topics": [] }, { - "uid": "github/lgbouma/gyro-interp", - "url": "https://github.com/lgbouma/gyro-interp", - "rel": "/software/repository/github/lgbouma/gyro-interp", - "avatar": "https://avatars.githubusercontent.com/u/13185735?v=4", - "description": "Gyrochronology via interpolation of open cluster rotation sequences.", + "uid": "github/NLeSC/Chemical-Analytics-Platform", + "url": "https://github.com/NLeSC/Chemical-Analytics-Platform", + "rel": "/software/repository/github/NLeSC/Chemical-Analytics-Platform", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Scripts to create chemical analytics platform based on Knime", "topics": [] }, { - "uid": "github/CobayaSampler/cobaya", - "url": "https://github.com/CobayaSampler/cobaya", - "rel": "/software/repository/github/CobayaSampler/cobaya", - "avatar": "https://avatars.githubusercontent.com/u/37546658?v=4", - "description": "Code for Bayesian Analysis", - "topics": [ - "bayesian-inference", - "cosmological-inference", - "mcmc-sampler" - ] - }, - { - "uid": "github/AStcherbinine/omegapy", - "url": "https://github.com/AStcherbinine/omegapy", - "rel": "/software/repository/github/AStcherbinine/omegapy", - "avatar": "https://avatars.githubusercontent.com/u/31817302?v=4", - "description": "Python tools for OMEGA/MEx observation data (importation/correction/display).", - "topics": [ - "astronomy", - "physics", - "python3", - "planetary-science" - ] + "uid": "github/NLeSC/xenon-grpc", + "url": "https://github.com/xenon-middleware/xenon-grpc", + "rel": "/software/repository/github/NLeSC/xenon-grpc", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "Xenon grpc based server", + "topics": [] }, { - "uid": "github/jgoodeve/streaktools", - "url": "https://github.com/jgoodeve/streaktools", - "rel": "/software/repository/github/jgoodeve/streaktools", - "avatar": "https://avatars.githubusercontent.com/u/71409619?v=4", - "description": "Python tools designed for the simulation, measurement and fitting of intentional satellite generated streaks for the purposes of photometric calibration", + "uid": "github/NLeSC/python-pcl", + "url": "https://github.com/NLeSC/python-pcl", + "rel": "/software/repository/github/NLeSC/python-pcl", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Python bindings to the pointcloud library (pcl)", "topics": [] }, { - "uid": "github/bloch-labs/bloch", - "url": "https://github.com/bloch-labs/bloch", - "rel": "/software/repository/github/bloch-labs/bloch", - "avatar": "https://avatars.githubusercontent.com/u/225359926?v=4", - "description": "The Bloch Quantum Programming Language", + "uid": "github/NLeSC/baklava", + "url": "https://github.com/NLeSC/baklava", + "rel": "/software/repository/github/NLeSC/baklava", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Deploy a Kubernetes cluster and big data services on the cloud.", "topics": [ - "quantum", - "hybrid", - "programming-language", - "strongly-typed" + "kubernetes", + "kubernetes-deployment", + "opennebula", + "ansible", + "terraform", + "kubespray", + "glusterfs" ] }, { - "uid": "github/MIT-STARLab/deconfuser", - "url": "https://github.com/MIT-STARLab/deconfuser", - "rel": "/software/repository/github/MIT-STARLab/deconfuser", - "avatar": "https://avatars.githubusercontent.com/u/61555529?v=4", - "description": "Fast orbit fitting to directly imaged multi-planetary systems", + "uid": "github/NLeSC/eEcology-script-wrapper", + "url": "https://github.com/NLeSC/eEcology-script-wrapper", + "rel": "/software/repository/github/NLeSC/eEcology-script-wrapper", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Web application to make Matlab, R scripts available.", "topics": [] }, { - "uid": "github/mzy2240/ESA", - "url": "https://github.com/mzy2240/ESA", - "rel": "/software/repository/github/mzy2240/ESA", - "avatar": "https://avatars0.githubusercontent.com/u/18620336?v=4", - "description": "Easy SimAuto (ESA): An easy-to-use Python connector to PowerWorld Simulator Automation Server (SimAuto)", + "uid": "github/NLeSC/fairdatapoint", + "url": "https://github.com/NLeSC/fairdatapoint", + "rel": "/software/repository/github/NLeSC/fairdatapoint", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Provide machine-readable descriptions of your data assets", "topics": [ - "python", - "powerworld", - "simulator", - "simauto", - "automation", - "powerworld-simulator", - "esa", - "simulator-automation-server", - "smart-grid", - "numpy", - "pandas" + "fair-data", + "metadata", + "dataset-interface", + "restful-api", + "rdf", + "dcat", + "dcmi" ] }, { - "uid": "github/Parsoa/SVDSS", - "url": "https://github.com/Parsoa/SVDSS", - "rel": "/software/repository/github/Parsoa/SVDSS", - "avatar": "https://avatars.githubusercontent.com/u/10050811?v=4", - "description": "Improved structural variant discovery in accurate long reads using sample-specific strings (SFS)", + "uid": "github/NLeSC/SalientDescriptor-matlab", + "url": "https://github.com/NLeSC/SalientDescriptor-matlab", + "rel": "/software/repository/github/NLeSC/SalientDescriptor-matlab", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": null, "topics": [] }, { - "uid": "github/ahwkuepper/mcluster", - "url": "https://github.com/ahwkuepper/mcluster", - "rel": "/software/repository/github/ahwkuepper/mcluster", - "avatar": "https://avatars.githubusercontent.com/u/4366828?v=4", - "description": "McLuster - a tool to make a star cluster", + "uid": "github/NLeSC/eSalsa-MPI", + "url": "https://github.com/NLeSC/eSalsa-MPI", + "rel": "/software/repository/github/NLeSC/eSalsa-MPI", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "This project contains the wide area MPI used in the eSalsa project", "topics": [] }, { - "uid": "github/mivp/encube", - "url": "https://github.com/mivp/encube", - "rel": "/software/repository/github/mivp/encube", - "avatar": "https://avatars.githubusercontent.com/u/6645755?v=4", - "description": "Encube: large-scale comparative visulisation of sets of multidimensional data", + "uid": "github/NLeSC/case-law-app", + "url": "https://github.com/NLeSC/case-law-app", + "rel": "/software/repository/github/NLeSC/case-law-app", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": null, "topics": [] }, { - "uid": "github/neeravkaushal/RIDs-in-WCDs", - "url": "https://github.com/neeravkaushal/RIDs-in-WCDs", - "rel": "/software/repository/github/neeravkaushal/RIDs-in-WCDs", - "avatar": "https://avatars.githubusercontent.com/u/48004241?v=4", - "description": null, + "uid": "github/NLeSC/eEcology-Classification", + "url": "https://github.com/NLeSC/eEcology-Classification", + "rel": "/software/repository/github/NLeSC/eEcology-Classification", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Classification tool", "topics": [] }, { - "uid": "github/HillLab/SomaticSiMu", - "url": "https://github.com/HillLab/SomaticSiMu", - "rel": "/software/repository/github/HillLab/SomaticSiMu", - "avatar": "https://avatars.githubusercontent.com/u/69210731?v=4", - "description": "SomaticSiMu generates single and double base pair substitutions, and single base pair insertions and deletions of biologically representative mutation signature probabilities and combinations.", - "topics": [ - "simulation", - "signature", - "mutation" - ] + "uid": "github/NLeSC/MAGMa", + "url": "https://github.com/NLeSC/MAGMa", + "rel": "/software/repository/github/NLeSC/MAGMa", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "eMetabolomics project: Mass Annotation based on in silico Generated Metabolites", + "topics": [] }, { - "uid": "github/Onogi/VIGoR", - "url": "https://github.com/Onogi/VIGoR", - "rel": "/software/repository/github/Onogi/VIGoR", - "avatar": "https://avatars.githubusercontent.com/u/11764076?v=4", - "description": "Variational Bayesian Inference for Genome-Wide Regression", + "uid": "github/NLeSC/xenon-cli", + "url": "https://github.com/xenon-middleware/xenon-cli", + "rel": "/software/repository/github/NLeSC/xenon-cli", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "Perform files and jobs operations with Xenon library from command line", "topics": [] }, { - "uid": "github/NeotomaDB/neotoma2", - "url": "https://github.com/NeotomaDB/neotoma2", - "rel": "/software/repository/github/NeotomaDB/neotoma2", - "avatar": "https://avatars.githubusercontent.com/u/19538006?v=4", - "description": "Repository for the updated neotoma R package.", + "uid": "github/NLeSC/lokum", + "url": "https://github.com/NLeSC/lokum", + "rel": "/software/repository/github/NLeSC/lokum", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Deploy GlusterFS, Docker, Spark and JupyterHub services on bare-metal cluster.", "topics": [ - "neotoma", - "paleoecology", - "rstats", - "r", - "earthcube", - "nsf" + "apache-spark", + "glusterfs", + "jupyterhub", + "cassandra", + "dask" ] }, { - "uid": "github/Kennicutt/SAUSERO", - "url": "https://github.com/Kennicutt/SAUSERO", - "rel": "/software/repository/github/Kennicutt/SAUSERO", - "avatar": "https://avatars.githubusercontent.com/u/176087051?v=4", - "description": null, + "uid": "github/NLeSC/Massive-PotreeConverter", + "url": "https://github.com/NLeSC/Massive-PotreeConverter", + "rel": "/software/repository/github/NLeSC/Massive-PotreeConverter", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Convert massive pointcloud, for example ahn2 (640 Billion points) to potree format.", "topics": [] }, { - "uid": "github/FEniCS/basix", - "url": "https://github.com/FEniCS/basix", - "rel": "/software/repository/github/FEniCS/basix", - "avatar": "https://avatars.githubusercontent.com/u/3868708?v=4", - "description": "FEniCS finite element basis evaluation library", - "topics": [ - "finite-elements", - "high-order", - "fenics-x" - ] - }, - { - "uid": "github/FEniCS/ffcx", - "url": "https://github.com/FEniCS/ffcx", - "rel": "/software/repository/github/FEniCS/ffcx", - "avatar": "https://avatars2.githubusercontent.com/u/3868708?v=4", - "description": "Next generation FEniCS Form Compiler", - "topics": [ - "partial-differential-equations", - "finite-element-methods", - "variational-method", - "code-generation", - "fenics" - ] + "uid": "github/NLeSC/hadrianus-scripts", + "url": "https://github.com/NLeSC/hadrianus-scripts", + "rel": "/software/repository/github/NLeSC/hadrianus-scripts", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Scripts used for the Hadrianus project", + "topics": [] }, { - "uid": "github/GreycLab/gmic", - "url": "https://github.com/GreycLab/gmic", - "rel": "/software/repository/github/GreycLab/gmic", - "avatar": "https://avatars.githubusercontent.com/u/110657271?v=4", - "description": "GREYC's Magic for Image Computing: A Full-Featured Open-Source Framework for Image Processing", + "uid": "github/NLeSC/EEG-epilepsy-diagnosis", + "url": "https://github.com/NLeSC/EEG-epilepsy-diagnosis", + "rel": "/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Detection of Epilepsy from EEG data (14 channel x 5 minutes)", "topics": [] }, { - "uid": "github/expressionanalysis/ea-utils", - "url": "https://github.com/ExpressionAnalysis/ea-utils", - "rel": "/software/repository/github/expressionanalysis/ea-utils", - "avatar": "https://avatars.githubusercontent.com/u/13385925?v=4", - "description": "Automatically exported from code.google.com/p/ea-utils", + "uid": "github/NLeSC/ExtJS-DateTime", + "url": "https://github.com/NLeSC/ExtJS-DateTime", + "rel": "/software/repository/github/NLeSC/ExtJS-DateTime", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "DateTime input field for Ext JS", "topics": [] }, { - "uid": "github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", - "url": "https://github.com/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", - "rel": "/software/repository/github/sibyllema/Fast-Multiscale-Diffusion-on-Graphs", - "avatar": "https://avatars.githubusercontent.com/u/68539461?v=4", - "description": "Standalone code to generate the figures for the paper \"Fast Multiscale Diffusion on Graphs\" accepted at ICASSP 2022.", + "uid": "github/NLeSC/OCTSegmentation", + "url": "https://github.com/NLeSC/OCTSegmentation", + "rel": "/software/repository/github/NLeSC/OCTSegmentation", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "EYR4-OCTSEG ", "topics": [] }, { - "uid": "github/simoncasassus/ConeRot", - "url": "https://github.com/simoncasassus/ConeRot", - "rel": "/software/repository/github/simoncasassus/ConeRot", - "avatar": "https://avatars.githubusercontent.com/u/22455693?v=4", - "description": null, + "uid": "github/NLeSC/SalientDetector-matlab", + "url": "https://github.com/NLeSC/SalientDetector-matlab", + "rel": "/software/repository/github/NLeSC/SalientDetector-matlab", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "MATLAB Software for Large Scale Imaging research @ NLeSc", "topics": [] }, { - "uid": "github/mirochaj/ares", - "url": "https://github.com/mirochaj/ares", - "rel": "/software/repository/github/mirochaj/ares", - "avatar": "https://avatars.githubusercontent.com/u/3018135?v=4", - "description": "Accelerated Reionization Era Simulations", + "uid": "github/NLeSC/python-template", + "url": "https://github.com/NLeSC/python-template", + "rel": "/software/repository/github/NLeSC/python-template", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Netherlands eScience Center Python Template", "topics": [ - "21-cm-cosmology", - "galaxy-formation", - "reionization", - "cosmic-dawn", - "intensity-mapping" + "cookiecutter", + "python" ] }, { - "uid": "github/mirochaj/sedop", - "url": "https://github.com/mirochaj/sedop", - "rel": "/software/repository/github/mirochaj/sedop", - "avatar": "https://avatars.githubusercontent.com/u/3018135?v=4", - "description": "Code for optimizing discrete versions of common SEDs.", - "topics": [] - }, - { - "uid": "github/FlorianThibord/OptimiR", - "url": "https://github.com/FlorianThibord/OptimiR", - "rel": "/software/repository/github/FlorianThibord/OptimiR", - "avatar": "https://avatars.githubusercontent.com/u/1457469?v=4", - "description": "miRSeq data alignment workflow - integrates genetic information to assess the impact of variants on miRNA expression", + "uid": "github/NLeSC/osmium", + "url": "https://github.com/xenon-middleware/osmium", + "rel": "/software/repository/github/NLeSC/osmium", + "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", + "description": "Xenon Job Webservice", "topics": [] }, { - "uid": "github/sibirrer/psfr", - "url": "https://github.com/sibirrer/psfr", - "rel": "/software/repository/github/sibirrer/psfr", - "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", - "description": "Point Spread Function reconstruction", + "uid": "github/toros-astro/corral", + "url": "https://github.com/toros-astro/corral", + "rel": "/software/repository/github/toros-astro/corral", + "avatar": "https://avatars.githubusercontent.com/u/11877437?v=4", + "description": "The Powerful Pipeline Framework", "topics": [ + "python", + "python3", + "framework", + "pipeline", "astronomy", - "psf-estimation", - "lenstronomy" + "database", + "data-science", + "oop" ] }, { - "uid": "github/sibirrer/lenstronomy", - "url": "https://github.com/sibirrer/lenstronomy", - "rel": "/software/repository/github/sibirrer/lenstronomy", - "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", - "description": "multi-purpose lens modeling software package", - "topics": [ - "gravitational-lensing", - "image-simulation", - "lenstronomy", - "astropy-affiliated", - "cosmology", - "astronomy", - "galaxies", - "galaxy-morphology", - "strong-lensing", - "astrophysics" - ] + "uid": "github/toros-astro/astroalign-legacy", + "url": "https://github.com/toros-astro/astroalign-legacy", + "rel": "/software/repository/github/toros-astro/astroalign-legacy", + "avatar": "https://avatars.githubusercontent.com/u/11877437?v=4", + "description": "A tool to align astronomical images based on asterism matching", + "topics": [] }, { - "uid": "github/sibirrer/hierArc", - "url": "https://github.com/sibirrer/hierArc", - "rel": "/software/repository/github/sibirrer/hierArc", - "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", - "description": "Hierarchical inference of cosmological parameters from a set of strong lensing systems", - "topics": [ - "lenstronomy", - "cosmology" - ] + "uid": "github/tingyuansen/The_Payne", + "url": "https://github.com/tingyuansen/The_Payne", + "rel": "/software/repository/github/tingyuansen/The_Payne", + "avatar": "https://avatars.githubusercontent.com/u/1833554?v=4", + "description": null, + "topics": [] }, { - "uid": "github/mgcooper/baseflow", - "url": "https://github.com/mgcooper/baseflow", - "rel": "/software/repository/github/mgcooper/baseflow", - "avatar": "https://avatars.githubusercontent.com/u/9771768?v=4", - "description": "baseflow recession analysis toolbox", + "uid": "github/MRChemSoft/mrchem", + "url": "https://github.com/MRChemSoft/mrchem", + "rel": "/software/repository/github/MRChemSoft/mrchem", + "avatar": "https://avatars.githubusercontent.com/u/16899707?v=4", + "description": "MultiResolution Chemistry", "topics": [ - "baseflow", - "groundwater", - "hydrology" + "multiwavelets", + "computational-chemistry", + "chemistry", + "physics", + "c-plus-plus", + "python", + "density-functional-theory" ] }, { - "uid": "github/potassco/clingo", - "url": "https://github.com/potassco/clingo", - "rel": "/software/repository/github/potassco/clingo", - "avatar": "https://avatars.githubusercontent.com/u/19286215?v=4", - "description": "\ud83e\udd14 A grounder and solver for logic programs.", + "uid": "github/esteinig/nanoq", + "url": "https://github.com/esteinig/nanoq", + "rel": "/software/repository/github/esteinig/nanoq", + "avatar": "https://avatars.githubusercontent.com/u/12873366?v=4", + "description": "Minimal but speedy quality control for nanopore reads in Rust :bear:", "topics": [] }, { - "uid": "github/Ecogenomics/GTDBTk", - "url": "https://github.com/Ecogenomics/GTDBTk", - "rel": "/software/repository/github/Ecogenomics/GTDBTk", - "avatar": "https://avatars.githubusercontent.com/u/1404161?v=4", - "description": "GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.", + "uid": "github/pybamm-team/liionpack", + "url": "https://github.com/pybamm-team/liionpack", + "rel": "/software/repository/github/pybamm-team/liionpack", + "avatar": "https://avatars.githubusercontent.com/u/48961907?v=4", + "description": "A battery pack simulation tool that uses the PyBaMM framework", + "topics": [] + }, + { + "uid": "github/pybamm-team/PyBaMM", + "url": "https://github.com/pybamm-team/PyBaMM", + "rel": "/software/repository/github/pybamm-team/PyBaMM", + "avatar": "https://avatars.githubusercontent.com/u/48961907?v=4", + "description": "Fast and flexible physics-based battery models in Python", "topics": [ - "taxonomy", - "species-assignments", - "phylogenetics", - "archaea", - "bacteria", - "nomenclature", - "bioinformatics", - "metagenomics" + "pybamm", + "battery-models", + "solvers", + "python", + "batteries", + "simulation" ] }, { - "uid": "github/gmorras/pyEFPE", - "url": "https://github.com/gmorras/pyEFPE", - "rel": "/software/repository/github/gmorras/pyEFPE", - "avatar": "https://avatars.githubusercontent.com/u/53296008?v=4", - "description": "Waveform model for inspiralling precessing-eccentric compact binaries", + "uid": "github/dgobbi/vtk-dicom", + "url": "https://github.com/dgobbi/vtk-dicom", + "rel": "/software/repository/github/dgobbi/vtk-dicom", + "avatar": "https://avatars.githubusercontent.com/u/223404?v=4", + "description": "A set of classes for using DICOM in VTK.", "topics": [] }, { - "uid": "github/JonasRieger/ldaPrototype", - "url": "https://github.com/JonasRieger/ldaPrototype", - "rel": "/software/repository/github/JonasRieger/ldaPrototype", - "avatar": "https://avatars0.githubusercontent.com/u/23215382?v=4", - "description": "Determine a Prototype from a number of runs of Latent Dirichlet Allocation (LDA) measuring its similarities with S-CLOP: A procedure to select the LDA run with highest mean pairwise similarity, which is measured by S-CLOP (Similarity of multiple sets by Clustering with Local Pruning), to all other runs.", - "topics": [ - "topicmodeling", - "topicmodelling", - "lda", - "topic-models", - "topic-model", - "topic-similarities", - "text-mining", - "textdata", - "latent-dirichlet-allocation", - "modelselection", - "model-selection" - ] + "uid": "github/denglab/SeqSero", + "url": "https://github.com/denglab/SeqSero", + "rel": "/software/repository/github/denglab/SeqSero", + "avatar": "https://avatars.githubusercontent.com/u/10891728?v=4", + "description": "Salmonella serotyping from genome sequencing data", + "topics": [] }, { - "uid": "github/NOSALRO/robot_dart", - "url": "https://github.com/NOSALRO/robot_dart", - "rel": "/software/repository/github/NOSALRO/robot_dart", - "avatar": "https://avatars.githubusercontent.com/u/117092888?v=4", - "description": "RobotDART: a versatile robot simulator for robotics and machine learning researchers", + "uid": "github/Cambridge-ICCS/FTorch", + "url": "https://github.com/Cambridge-ICCS/FTorch", + "rel": "/software/repository/github/Cambridge-ICCS/FTorch", + "avatar": "https://avatars.githubusercontent.com/u/97293575?v=4", + "description": "A library for directly calling PyTorch ML models from Fortran.", "topics": [ - "dart", - "magnum", - "eigen3" + "fortran", + "pytorch", + "machine-learning", + "deep-learning", + "interoperability", + "torch", + "python", + "hacktoberfest" ] }, { - "uid": "github/biomed-AI/GraphBepi", - "url": "https://github.com/biomed-AI/GraphBepi", - "rel": "/software/repository/github/biomed-AI/GraphBepi", - "avatar": "https://avatars.githubusercontent.com/u/57830798?v=4", - "description": null, + "uid": "github/harrispopgen/mutyper", + "url": "https://github.com/harrispopgen/mutyper", + "rel": "/software/repository/github/harrispopgen/mutyper", + "avatar": "https://avatars.githubusercontent.com/u/36174395?v=4", + "description": "Ancestral k-mer mutation types for SNP data", "topics": [] }, { - "uid": "github/rinikerlab/Ensembler", - "url": "https://github.com/rinikerlab/Ensembler", - "rel": "/software/repository/github/rinikerlab/Ensembler", - "avatar": "https://avatars.githubusercontent.com/u/48841290?v=4", - "description": null, + "uid": "github/AbeelLab/lorikeet", + "url": "https://github.com/AbeelLab/lorikeet", + "rel": "/software/repository/github/AbeelLab/lorikeet", + "avatar": "https://avatars.githubusercontent.com/u/10528646?v=4", + "description": "Digital spoligotyping of MTB strains from Illumina read data", "topics": [] }, { - "uid": "github/mpound/pdrtpy", - "url": "https://github.com/mpound/pdrtpy", - "rel": "/software/repository/github/mpound/pdrtpy", - "avatar": "https://avatars.githubusercontent.com/u/22331890?v=4", - "description": "PhotoDissociation Region Toolbox Python module", + "uid": "github/sandialabs/pvOps", + "url": "https://github.com/sandialabs/pvOps", + "rel": "/software/repository/github/sandialabs/pvOps", + "avatar": "https://avatars.githubusercontent.com/u/4993680?v=4", + "description": "A set of documented functions for supporting operations research of photovoltaic energy systems. ", "topics": [] }, { - "uid": "github/mpound/comb", - "url": "https://github.com/mpound/comb", - "rel": "/software/repository/github/mpound/comb", - "avatar": "https://avatars.githubusercontent.com/u/22331890?v=4", - "description": "The AT&T Bell labs singledish radio astronomy data reduction package", + "uid": "github/nimble-dev/nimbleHMC", + "url": "https://github.com/nimble-dev/nimbleHMC", + "rel": "/software/repository/github/nimble-dev/nimbleHMC", + "avatar": "https://avatars.githubusercontent.com/u/7871767?v=4", + "description": "HMC and other derivative-based MCMC sampling algorithms for the nimble package", "topics": [] }, { - "uid": "github/elwinter/nnde", - "url": "https://github.com/elwinter/nnde", - "rel": "/software/repository/github/elwinter/nnde", - "avatar": "https://avatars.githubusercontent.com/u/6576907?v=4", - "description": "nnde is a package of Python modules which implement a set of neural networks which solve ordinary and partial differential equations. This code is based on the previous package, nnode.", + "uid": "github/savila/halogen", + "url": "https://github.com/savila/HALOGEN", + "rel": "/software/repository/github/savila/halogen", + "avatar": "https://avatars.githubusercontent.com/u/6678454?v=4", + "description": null, "topics": [] }, { - "uid": "github/CMU-SAFARI/BLEND", - "url": "https://github.com/CMU-SAFARI/BLEND", - "rel": "/software/repository/github/CMU-SAFARI/BLEND", - "avatar": "https://avatars.githubusercontent.com/u/8065918?v=4", - "description": "BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applications: 1) finding overlapping reads and 2) read mapping. Described by Firtina et al. (published in NARGAB https://doi.org/10.1093/nargab/lqad004)", + "uid": "github/ReSurfEMG/ReSurfEMG", + "url": "https://github.com/ReSurfEMG/ReSurfEMG", + "rel": "/software/repository/github/ReSurfEMG/ReSurfEMG", + "avatar": "https://avatars.githubusercontent.com/u/107040410?v=4", + "description": "An open source library for analysis of respiratory EMG", "topics": [ - "bioinformatics", - "blend", - "de-novo-assembly", - "genome-analysis", - "genome-assembly", - "minimizers", - "read-mapping", - "strobemers", - "fuzzy-seeds", - "read-overlapping", - "seed-matching", - "spaced-seeds" + "electromyogram", + "electromyography", + "healthcare-analysis" ] }, { - "uid": "github/VirtualPlanetaryLaboratory/atmos", - "url": "https://github.com/VirtualPlanetaryLaboratory/atmos", - "rel": "/software/repository/github/VirtualPlanetaryLaboratory/atmos", - "avatar": "https://avatars.githubusercontent.com/u/6665798?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/VirtualPlanetaryLaboratory/vplanet", - "url": "https://github.com/VirtualPlanetaryLaboratory/vplanet", - "rel": "/software/repository/github/VirtualPlanetaryLaboratory/vplanet", - "avatar": "https://avatars.githubusercontent.com/u/6665798?v=4", - "description": "The Virtual Planet Simulator", + "uid": "github/JuliaManifolds/Manopt.jl", + "url": "https://github.com/JuliaManifolds/Manopt.jl", + "rel": "/software/repository/github/JuliaManifolds/Manopt.jl", + "avatar": "https://avatars.githubusercontent.com/u/62259457?v=4", + "description": "Optimization on Manifolds in Julia", "topics": [ - "habitability", - "n-body-simulator", - "galaxies", - "geophysics", - "orbits", - "tides", - "binary-stars", - "rotation", - "atmospheres", - "magnetic-fields", - "climate", - "exoplanets", - "stellar", - "geochemistry", - "atmospheric-escape", - "planetary-science", - "stellar-astrophysics", - "astrobiology" + "manifolds", + "julia", + "optimization", + "manopt" ] }, { - "uid": "github/mthorrell/gbnet", - "url": "https://github.com/mthorrell/gbnet", - "rel": "/software/repository/github/mthorrell/gbnet", - "avatar": "https://avatars.githubusercontent.com/u/15166269?v=4", - "description": "Gradient Boosting Modules for pytorch", - "topics": [] - }, - { - "uid": "github/FCS-analysis/multipletau", - "url": "https://github.com/FCS-analysis/multipletau", - "rel": "/software/repository/github/FCS-analysis/multipletau", - "avatar": "https://avatars.githubusercontent.com/u/16266790?v=4", - "description": "python multiple-tau correlation algorithm", + "uid": "github/Huracan-project/huracanpy", + "url": "https://github.com/Huracan-project/huracanpy", + "rel": "/software/repository/github/Huracan-project/huracanpy", + "avatar": "https://avatars.githubusercontent.com/u/167978010?v=4", + "description": "Package for working with various forms of feature tracking data", "topics": [] }, { - "uid": "github/ropenscilabs/allcontributors", - "url": "https://github.com/ropenscilabs/allcontributors", - "rel": "/software/repository/github/ropenscilabs/allcontributors", - "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", - "description": "all-contributions as an R package", + "uid": "github/0x0f0f0f/Metatheory.jl", + "url": "https://github.com/0x0f0f0f/Metatheory.jl", + "rel": "/software/repository/github/0x0f0f0f/Metatheory.jl", + "avatar": "https://avatars.githubusercontent.com/u/17289614?v=4", + "description": "General purpose metaprogramming and algebraic computation library for the Julia programming language", "topics": [ - "scalereprod" + "julia", + "symbolic", + "symbolic-computation", + "algebraic", + "cas", + "metatheory", + "programming-language", + "optimization", + "compiler-optimization", + "compiler-construction" ] }, { - "uid": "github/ropenscilabs/r2readthedocs", - "url": "https://github.com/ropenscilabs/r2readthedocs", - "rel": "/software/repository/github/ropenscilabs/r2readthedocs", - "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", - "description": "Convert R package documentation to a 'readthedocs' website", + "uid": "github/adtzlr/felupe", + "url": "https://github.com/adtzlr/felupe", + "rel": "/software/repository/github/adtzlr/felupe", + "avatar": "https://avatars.githubusercontent.com/u/5793153?v=4", + "description": "finite element analysis for continuum mechanics of solid bodies", "topics": [ - "scalereprod" + "finite-element-analysis", + "python", + "hyperelasticity", + "fem", + "partial-differential-equations", + "pde", + "scientific-computing", + "solid-mechanics", + "fea", + "finite-element-methods", + "solid-mechanics-codes", + "finite-elements", + "umat", + "3d", + "jax" ] }, { - "uid": "github/ropenscilabs/gendercoder", - "url": "https://github.com/ropenscilabs/gendercoder", - "rel": "/software/repository/github/ropenscilabs/gendercoder", - "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", - "description": "Creating R package to code free text gender responses", - "topics": [ - "ozunconf18", - "unconf", - "r", - "r-package", - "rstats", - "gender-diversity", - "gender-diversity", - "ozunconf18", - "unconf", - "data-extraction" - ] + "uid": "github/thetisproject/thetis", + "url": "https://github.com/thetisproject/thetis", + "rel": "/software/repository/github/thetisproject/thetis", + "avatar": "https://avatars.githubusercontent.com/u/17277005?v=4", + "description": "Finite element flow solver for simulating coastal and estuarine flows.", + "topics": [] }, { - "uid": "github/ropenscilabs/qcoder", - "url": "https://github.com/ropenscilabs/qcoder", - "rel": "/software/repository/github/ropenscilabs/qcoder", - "avatar": "https://avatars.githubusercontent.com/u/16314060?v=4", - "description": "Lightweight package to do qualitative coding", + "uid": "github/BodeTobias/AutoPDEx", + "url": "https://github.com/BodeTobias/AutoPDEx", + "rel": "/software/repository/github/BodeTobias/AutoPDEx", + "avatar": "https://avatars.githubusercontent.com/u/149093216?v=4", + "description": "An Automized Partial Differential Equation solver based on JAX", "topics": [ - "unconf18", - "r", - "r-package", - "rstats", - "unconf", - "unconf", - "unconf18", - "data-extraction" + "finite-element-method", + "jax", + "partial-differential-equations", + "sensitivity-analysis", + "differential-algebraic-equations", + "ordinary-differential-equations" ] }, { - "uid": "github/dellytools/sansa", - "url": "https://github.com/dellytools/sansa", - "rel": "/software/repository/github/dellytools/sansa", - "avatar": "https://avatars.githubusercontent.com/u/23377671?v=4", - "description": "Structural variant annotation", - "topics": [ - "structural-variation", - "sv-annotation", - "gene-annotation", - "delly" - ] + "uid": "github/ahoward-cf/ppmap", + "url": "https://github.com/ahoward-cf/ppmap", + "rel": "/software/repository/github/ahoward-cf/ppmap", + "avatar": "https://avatars.githubusercontent.com/u/29404906?v=4", + "description": "Code for column density mapping with extra dimensions (temperature and dust opacity index).", + "topics": [] }, { - "uid": "github/dellytools/delly", - "url": "https://github.com/dellytools/delly", - "rel": "/software/repository/github/dellytools/delly", - "avatar": "https://avatars3.githubusercontent.com/u/23377671?v=4", - "description": "DELLY2: Structural variant discovery by integrated paired-end and split-read analysis", - "topics": [ - "structural-variation", - "sv-discovery", - "delly-users", - "delly", - "rearrangement", - "genomic", - "cancer-genomics", - "germline", - "tumor", - "svs" - ] + "uid": "github/GreenBankObservatory/gbtgridder", + "url": "https://github.com/GreenBankObservatory/gbtgridder", + "rel": "/software/repository/github/GreenBankObservatory/gbtgridder", + "avatar": "https://avatars.githubusercontent.com/u/20340212?v=4", + "description": "A stand-alone spectral gridder and imager for the Green Bank Telescope", + "topics": [] }, { - "uid": "github/josegcpa/nnunet_serve", - "url": "https://github.com/josegcpa/nnunet_serve", - "rel": "/software/repository/github/josegcpa/nnunet_serve", - "avatar": "https://avatars.githubusercontent.com/u/40271262?v=4", - "description": "A one-size-fits-all solution to run nnU-Net models. Supports TotalSegmentator models.", - "topics": [ - "docker", - "nnunet", - "wrapper" - ] + "uid": "github/stevengj/nlopt", + "url": "https://github.com/stevengj/nlopt", + "rel": "/software/repository/github/stevengj/nlopt", + "avatar": "https://avatars.githubusercontent.com/u/2913679?v=4", + "description": "library for nonlinear optimization, wrapping many algorithms for global and local, constrained or unconstrained, optimization", + "topics": [] }, { - "uid": "github/mendezVKI/MODULO", - "url": "https://github.com/mendezVKI/MODULO", - "rel": "/software/repository/github/mendezVKI/MODULO", - "avatar": "https://avatars.githubusercontent.com/u/52033190?v=4", - "description": "MODULO (MODal mULtiscale pOd) is a software developed at the von Karman Institute to perform Multiscale Modal Analysis of numerical and experimental data using the mPOD. ", + "uid": "github/BGI-Qingdao/TGS-GapCloser", + "url": "https://github.com/BGI-Qingdao/TGS-GapCloser", + "rel": "/software/repository/github/BGI-Qingdao/TGS-GapCloser", + "avatar": "https://avatars.githubusercontent.com/u/39953106?v=4", + "description": "A gap-closing software tool that uses long reads to enhance genome assembly.", "topics": [] }, { - "uid": "github/fgbuster/fgbuster", - "url": "https://github.com/fgbuster/fgbuster", - "rel": "/software/repository/github/fgbuster/fgbuster", - "avatar": "https://avatars.githubusercontent.com/u/37635391?v=4", - "description": "Parametric component separation for Cosmic Microwave Background observations", + "uid": "github/tinawunderlich/MultichannelGPR", + "url": "https://github.com/tinawunderlich/MultichannelGPR", + "rel": "/software/repository/github/tinawunderlich/MultichannelGPR", + "avatar": "https://avatars.githubusercontent.com/u/61414307?v=4", + "description": "A collection of MATLAB scripts for proccesing and visualization of (Multichannel) GPR data", "topics": [] }, { - "uid": "github/wm75/vaporup", - "url": "https://github.com/wm75/vaporup", - "rel": "/software/repository/github/wm75/vaporup", - "avatar": "https://avatars.githubusercontent.com/u/4742081?v=4", - "description": null, + "uid": "github/tessgi/tvguide", + "url": "https://github.com/tessgi/tvguide", + "rel": "/software/repository/github/tessgi/tvguide", + "avatar": "https://avatars.githubusercontent.com/u/27449508?v=4", + "description": "A tool for determining whether stars and galaxies are observable by TESS.", "topics": [] }, { - "uid": "github/MDAnalysis/mdanalysis", - "url": "https://github.com/MDAnalysis/mdanalysis", - "rel": "/software/repository/github/MDAnalysis/mdanalysis", - "avatar": "https://avatars1.githubusercontent.com/u/11445951?v=4", - "description": "MDAnalysis is a Python library to analyze molecular dynamics trajectories.", - "topics": [ - "molecular-dynamics", - "python", - "science", - "trajectory-analysis", - "molecular-simulation", - "molecular-dynamics-simulation", - "mdanalysis", - "computational-chemistry" - ] + "uid": "github/cweniger/swordfish", + "url": "https://github.com/cweniger/swordfish", + "rel": "/software/repository/github/cweniger/swordfish", + "avatar": "https://avatars.githubusercontent.com/u/2024084?v=4", + "description": "A Python tool to study the information yield of counting experiments.", + "topics": [] }, { - "uid": "github/garrelt/C2-Ray3Dm1D_Helium", - "url": "https://github.com/garrelt/C2-Ray3Dm1D_Helium", - "rel": "/software/repository/github/garrelt/C2-Ray3Dm1D_Helium", - "avatar": "https://avatars.githubusercontent.com/u/856731?v=4", - "description": "C2-Ray radiative transfer / photo-ionziation code, version with helium, combining 1D and 3D", - "topics": [ - "cosmic-dawn", - "reionization", - "cosmology", - "radiative-transfer" - ] + "uid": "github/mmore500/hstrat", + "url": "https://github.com/mmore500/hstrat", + "rel": "/software/repository/github/mmore500/hstrat", + "avatar": "https://avatars.githubusercontent.com/u/10763333?v=4", + "description": "hstrat enables phylogenetic inference on distributed digital evolution populations", + "topics": [] }, { - "uid": "github/garrelt/C2-Ray1D", - "url": "https://github.com/garrelt/C2-Ray1D", - "rel": "/software/repository/github/garrelt/C2-Ray1D", - "avatar": "https://avatars.githubusercontent.com/u/856731?v=4", - "description": "1D version of C2-Ray", + "uid": "github/dkn16/H21F", + "url": "https://github.com/dkn16/H21F", + "rel": "/software/repository/github/dkn16/H21F", + "avatar": "https://avatars.githubusercontent.com/u/81129696?v=4", + "description": "A Gaussian Process based 21-cm foreground separation code.", "topics": [] }, { - "uid": "github/dcjones/quip", - "url": "https://github.com/dcjones/quip", - "rel": "/software/repository/github/dcjones/quip", - "avatar": "https://avatars.githubusercontent.com/u/210361?v=4", - "description": "Compressing next-generation sequencing data with extreme prejudice.", + "uid": "github/dkn16/Synax", + "url": "https://github.com/dkn16/Synax", + "rel": "/software/repository/github/dkn16/Synax", + "avatar": "https://avatars.githubusercontent.com/u/81129696?v=4", + "description": "All sky Synchrotron emission simulation with JAX", "topics": [] }, { - "uid": "github/LDEO-CREW/Pythonic-DISORT", - "url": "https://github.com/LDEO-CREW/Pythonic-DISORT", - "rel": "/software/repository/github/LDEO-CREW/Pythonic-DISORT", - "avatar": "https://avatars.githubusercontent.com/u/112423107?v=4", - "description": "Discrete Ordinates Solver for the (1D) Radiative Transfer Equation in a single or multi-layer plane-parallel atmosphere. Coded entirely in Python 3. Based on Stamnes' FORTRAN DISORT (see references in the Jupyter Notebook) and has its main features.", + "uid": "github/nsoranzo/sspace_basic", + "url": "https://github.com/nsoranzo/sspace_basic", + "rel": "/software/repository/github/nsoranzo/sspace_basic", + "avatar": "https://avatars.githubusercontent.com/u/4924623?v=4", + "description": "SSPACE Basic, SSAKE-based Scaffolding of Pre-Assembled Contigs after Extension", + "topics": [] + }, + { + "uid": "github/aertslab/pySCENIC", + "url": "https://github.com/aertslab/pySCENIC", + "rel": "/software/repository/github/aertslab/pySCENIC", + "avatar": "https://avatars.githubusercontent.com/u/3940817?v=4", + "description": "pySCENIC is a lightning-fast python implementation of the SCENIC pipeline (Single-Cell rEgulatory Network Inference and Clustering) which enables biologists to infer transcription factors, gene regulatory networks and cell types from single-cell RNA-seq data.", "topics": [ - "atmospheric-modelling", - "discrete-ordinates-method", - "disort", - "python", - "radiative-transfer", - "radiative-transfer-models" + "single-cell", + "transcriptomics", + "gene-regulatory-network", + "transcription-factors" ] }, { - "uid": "github/KarrLab/de_sim", - "url": "https://github.com/KarrLab/de_sim", - "rel": "/software/repository/github/KarrLab/de_sim", - "avatar": "https://avatars3.githubusercontent.com/u/13785824?v=4", - "description": "Python-based object-oriented discrete-event simulation tool for complex, data-driven modeling", + "uid": "github/mentatpsi/OSGenome", + "url": "https://github.com/mentatpsi/OSGenome", + "rel": "/software/repository/github/mentatpsi/OSGenome", + "avatar": "https://avatars.githubusercontent.com/u/1183961?v=4", + "description": "An Open Source Web Application for Genetic Data (SNPs) using 23AndMe and Data Crawling Technologies", "topics": [ - "discrete-event-simulation", - "data-driven-model", - "computational-modelling", - "simulation", - "object-oriented-programming", - "python" + "23andme", + "snps", + "genome", + "data-crawling", + "python", + "genetic-data", + "kendo", + "flask", + "genetics", + "snpedia", + "raw-data" ] }, { - "uid": "github/toshiyan/cmblensplus", - "url": "https://github.com/toshiyan/cmblensplus", - "rel": "/software/repository/github/toshiyan/cmblensplus", - "avatar": "https://avatars.githubusercontent.com/u/16786258?v=4", - "description": null, - "topics": [] + "uid": "github/pysat/pysat", + "url": "https://github.com/pysat/pysat", + "rel": "/software/repository/github/pysat/pysat", + "avatar": "https://avatars.githubusercontent.com/u/54805292?v=4", + "description": "Generalized satellite and space science data processing and file management. ", + "topics": [ + "space", + "satellite-data", + "space-science", + "measurements", + "python", + "netcdf", + "nasa-data", + "science-research", + "ionosphere", + "magnetosphere", + "thermosphere", + "radar-measurements", + "nasa", + "cubesat", + "plasma", + "electric-fields" + ] }, { - "uid": "github/cagrikymk/JAX-ReaxFF", - "url": "https://github.com/cagrikymk/JAX-ReaxFF", - "rel": "/software/repository/github/cagrikymk/JAX-ReaxFF", - "avatar": "https://avatars.githubusercontent.com/u/15324155?v=4", - "description": "JAX-ReaxFF: A Gradient Based Framework for Extremely Fast Optimization of Reactive Force Fields", + "uid": "github/yqiuu/spectuner", + "url": "https://github.com/yqiuu/spectuner", + "rel": "/software/repository/github/yqiuu/spectuner", + "avatar": "https://avatars.githubusercontent.com/u/26683739?v=4", + "description": "A tool for automated line identification of interstellar molecules.", "topics": [] }, { - "uid": "github/qianlivan/RPPPS", - "url": "https://github.com/qianlivan/RPPPS", - "rel": "/software/repository/github/qianlivan/RPPPS", - "avatar": "https://avatars.githubusercontent.com/u/15792950?v=4", - "description": null, - "topics": [] + "uid": "github/yqiuu/starduster", + "url": "https://github.com/yqiuu/starduster", + "rel": "/software/repository/github/yqiuu/starduster", + "avatar": "https://avatars.githubusercontent.com/u/26683739?v=4", + "description": "A multi-wavelength SED model based on radiative transfer and deep learning.", + "topics": [ + "deep-neural-networks", + "radiative-transfer", + "astronomy" + ] }, { - "uid": "github/patrickwest/EukRep", - "url": "https://github.com/patrickwest/EukRep", - "rel": "/software/repository/github/patrickwest/EukRep", - "avatar": "https://avatars.githubusercontent.com/u/21266477?v=4", - "description": "Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets", + "uid": "github/alixlam/fmristroke", + "url": "https://github.com/alixlam/fmristroke", + "rel": "/software/repository/github/alixlam/fmristroke", + "avatar": "https://avatars.githubusercontent.com/u/60109304?v=4", + "description": "Adding quality checks and confounds computation steps to fmriprep for stroke data.", "topics": [] }, { - "uid": "github/lucatelli/morphen", - "url": "https://github.com/lucatelli/morphen", - "rel": "/software/repository/github/lucatelli/morphen", - "avatar": "https://avatars.githubusercontent.com/u/11822348?v=4", - "description": "Collection of functions for astronomical image analysis and processing. These tools involves pure python, but also are integrated with CASA (https://casa.nrao.edu/)", + "uid": "github/mdsufz/MuDoGeR", + "url": "https://github.com/mdsufz/MuDoGeR", + "rel": "/software/repository/github/mdsufz/MuDoGeR", + "avatar": "https://avatars.githubusercontent.com/u/53437593?v=4", + "description": "MuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.", "topics": [] }, { - "uid": "github/ziotom78/libpolycomp", - "url": "https://github.com/ziotom78/libpolycomp", - "rel": "/software/repository/github/ziotom78/libpolycomp", - "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", - "description": "A compression library for one-dimensional numerical datastreams", - "topics": [] + "uid": "github/htjb/globalemu", + "url": "https://github.com/htjb/globalemu", + "rel": "/software/repository/github/htjb/globalemu", + "avatar": "https://avatars.githubusercontent.com/u/40355093?v=4", + "description": "Robust and fast global (sky-averaged) 21-cm signal emulation", + "topics": [ + "astrophysics", + "cosmology", + "neural-networks", + "emulator" + ] }, { - "uid": "github/ziotom78/Healpix.jl", - "url": "https://github.com/ziotom78/Healpix.jl", - "rel": "/software/repository/github/ziotom78/Healpix.jl", - "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", - "description": "Healpix library written in Julia", + "uid": "github/htjb/margarine", + "url": "https://github.com/htjb/margarine", + "rel": "/software/repository/github/htjb/margarine", + "avatar": "https://avatars.githubusercontent.com/u/40355093?v=4", + "description": "Code to replicate posterior probability distributions with bijectors/KDEs and perform marginal KL/bayesian dimensionality calculations.", "topics": [] }, { - "uid": "github/ziotom78/dacapo_calibration", - "url": "https://github.com/ziotom78/dacapo_calibration", - "rel": "/software/repository/github/ziotom78/dacapo_calibration", - "avatar": "https://avatars.githubusercontent.com/u/377795?v=4", - "description": "Calibrating TODs using the Da Capo algorithm", - "topics": [] + "uid": "github/htjb/maxsmooth", + "url": "https://github.com/htjb/maxsmooth", + "rel": "/software/repository/github/htjb/maxsmooth", + "avatar": "https://avatars3.githubusercontent.com/u/40355093?v=4", + "description": "Constrained Derivative Function Optimisation", + "topics": [ + "astrophysics", + "science", + "maths", + "physics", + "optimisation", + "optimisation-algorithms" + ] }, { - "uid": "github/pynucastro/pynucastro", - "url": "https://github.com/pynucastro/pynucastro", - "rel": "/software/repository/github/pynucastro/pynucastro", - "avatar": "https://avatars.githubusercontent.com/u/17711850?v=4", - "description": "python interfaces to the nuclear reaction rate databases", - "topics": [] + "uid": "github/klee/klee", + "url": "https://github.com/klee/klee", + "rel": "/software/repository/github/klee/klee", + "avatar": "https://avatars.githubusercontent.com/u/6224192?v=4", + "description": "KLEE Symbolic Execution Engine", + "topics": [ + "symbolic-execution", + "klee" + ] }, { - "uid": "github/fmichel/MaDKit", - "url": "https://github.com/fmichel/MaDKit", - "rel": "/software/repository/github/fmichel/MaDKit", - "avatar": "https://avatars.githubusercontent.com/u/645197?v=4", - "description": "MultiAgent Development Kit - version 5", + "uid": "github/oscaribv/citlalicue", + "url": "https://github.com/oscaribv/citlalicue", + "rel": "/software/repository/github/oscaribv/citlalicue", + "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", + "description": "Create and manipulate stellar light curves!", "topics": [ - "multi-agent", - "simulation", - "agent", - "java", - "artificial-intelligence", - "agent-based", - "agent-based-simulation" + "transits", + "light-curves", + "exoplanets", + "planets" ] }, { - "uid": "github/fmichel/TurtleKit", - "url": "https://github.com/fmichel/TurtleKit", - "rel": "/software/repository/github/fmichel/TurtleKit", - "avatar": "https://avatars.githubusercontent.com/u/645197?v=4", - "description": "TurtleKit 3 - Multi-Agent Based Simulation Platform", + "uid": "github/oscaribv/pyaneti", + "url": "https://github.com/oscaribv/pyaneti", + "rel": "/software/repository/github/oscaribv/pyaneti", + "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", + "description": "A multi-planet Radial Velocity and Transit modelling software", "topics": [ - "mabs", - "agent", - "java", - "abm" + "exoplanets", + "planets", + "mcmc", + "radial-velocities", + "multi-planet-fitting", + "transiting-planets" ] }, { - "uid": "github/SebastianBocquet/pygtc", - "url": "https://github.com/SebastianBocquet/pygtc", - "rel": "/software/repository/github/SebastianBocquet/pygtc", - "avatar": "https://avatars.githubusercontent.com/u/9337470?v=4", - "description": "Make a sweet giant triangle confusogram (GTC) plot", + "uid": "github/oscaribv/exotrending", + "url": "https://github.com/oscaribv/exotrending", + "rel": "/software/repository/github/oscaribv/exotrending", + "avatar": "https://avatars.githubusercontent.com/u/8753089?v=4", + "description": "A fast and easy-to-use light curve detrending software for exoplanets", "topics": [ - "mcmc", - "bayesian-data-analysis", - "data-visualization" + "exoplanets", + "astronomy", + "astrophysics" ] }, { - "uid": "github/bluefoxr/COINr", - "url": "https://github.com/bluefoxr/COINr", - "rel": "/software/repository/github/bluefoxr/COINr", - "avatar": "https://avatars.githubusercontent.com/u/72880276?v=4", - "description": "COINr", + "uid": "github/tcallister/autoregressive-bbh-inference", + "url": "https://github.com/tcallister/autoregressive-bbh-inference", + "rel": "/software/repository/github/tcallister/autoregressive-bbh-inference", + "avatar": "https://avatars.githubusercontent.com/u/11800515?v=4", + "description": "This repository holds code and data release products behind the paper \"A parameter-free tour of the binary black hole population\"", "topics": [] }, { - "uid": "github/putonti/virmine", - "url": "https://github.com/putonti/virMine", - "rel": "/software/repository/github/putonti/virmine", - "avatar": "https://avatars.githubusercontent.com/u/10090771?v=4", - "description": null, - "topics": [] + "uid": "github/PNNL-m-q/mza", + "url": "https://github.com/PNNL-m-q/mza", + "rel": "/software/repository/github/PNNL-m-q/mza", + "avatar": "https://avatars.githubusercontent.com/u/105317099?v=4", + "description": "Software to convert multidimensional MS data from files in proprietary vendor formats to HDF5 format in the simple MZA data structure.", + "topics": [ + "ion-mobility-spectrometry", + "mass-spectrometry", + "data-conversion" + ] }, { - "uid": "github/seahorce-scidac/REMORA", - "url": "https://github.com/seahorce-scidac/REMORA", - "rel": "/software/repository/github/seahorce-scidac/REMORA", - "avatar": "https://avatars.githubusercontent.com/u/111521647?v=4", - "description": "A GPU-enabled version of ROMS", + "uid": "github/PopovIILab/KrakenParser", + "url": "https://github.com/PopovIILab/KrakenParser", + "rel": "/software/repository/github/PopovIILab/KrakenParser", + "avatar": "https://avatars.githubusercontent.com/u/170358473?v=4", + "description": "\ud83d\uddc2\ufe0fParse multiple Kraken2 reports into CSV files on 6 taxonomical levels", "topics": [ - "amrex" + "kraken2", + "metagenomic-pipeline", + "metagenomics", + "krakentools" ] }, { - "uid": "github/rudeboybert/forestecology", - "url": "https://github.com/rudeboybert/forestecology", - "rel": "/software/repository/github/rudeboybert/forestecology", - "avatar": "https://avatars.githubusercontent.com/u/4574203?v=4", - "description": "forestecology R package of Methods and Data for Forest Ecology Model Fitting and Assessment", + "uid": "github/eggnogdb/eggnog-mapper", + "url": "https://github.com/eggnogdb/eggnog-mapper", + "rel": "/software/repository/github/eggnogdb/eggnog-mapper", + "avatar": "https://avatars.githubusercontent.com/u/44813203?v=4", + "description": "Fast genome-wide functional annotation through orthology assignment.", "topics": [ - "forestecology", - "tidyverse" + "annotations", + "orthology-assignments", + "functional-annotation", + "genomics" ] }, { - "uid": "github/containers/podman", - "url": "https://github.com/containers/podman", - "rel": "/software/repository/github/containers/podman", - "avatar": "https://avatars.githubusercontent.com/u/5874934?v=4", - "description": "Podman: A tool for managing OCI containers and pods", - "topics": [] + "uid": "github/0xCoto/Virgo", + "url": "https://github.com/0xCoto/Virgo", + "rel": "/software/repository/github/0xCoto/Virgo", + "avatar": "https://avatars.githubusercontent.com/u/25392776?v=4", + "description": "\ud83d\udce1 Virgo: A Versatile Spectrometer for Radio Astronomy", + "topics": [ + "sdr", + "virgo", + "radio-telescope", + "radio", + "telescope", + "astronomy", + "spectrometer", + "rf", + "rfi-mitigation", + "astrophysics", + "radio-astronomy" + ] }, { - "uid": "github/msalibian/RBF", - "url": "https://github.com/msalibian/RBF", - "rel": "/software/repository/github/msalibian/RBF", - "avatar": "https://avatars.githubusercontent.com/u/5422467?v=4", - "description": "A Robust backfitting algorithm", - "topics": [] + "uid": "github/jumphone/inferloop", + "url": "https://github.com/jumphone/InferLoop", + "rel": "/software/repository/github/jumphone/inferloop", + "avatar": "https://avatars.githubusercontent.com/u/14286721?v=4", + "description": "InferLoop: leveraging single-cell chromatin accessibility for the signal of chromatin loop", + "topics": [ + "chromatin-structure", + "scatac-seq", + "single-cell-3d-genome-structure", + "single-cell-chromatin-accessibility", + "single-cell-multi-omics", + "spatial-chromatin-accessibility" + ] }, { - "uid": "github/ivastar/clear", - "url": "https://github.com/ivastar/clear", - "rel": "/software/repository/github/ivastar/clear", - "avatar": "https://avatars.githubusercontent.com/u/4562253?v=4", - "description": "Library for the CLEAR collaboration codebase.", + "uid": "github/aztekas-code/aztekas-main", + "url": "https://github.com/aztekas-code/aztekas-main", + "rel": "/software/repository/github/aztekas-code/aztekas-main", + "avatar": "https://avatars.githubusercontent.com/u/46830656?v=4", + "description": "GRHD numerical code ", "topics": [] }, { - "uid": "github/astrosmili/smili", - "url": "https://github.com/astrosmili/smili", - "rel": "/software/repository/github/astrosmili/smili", - "avatar": "https://avatars.githubusercontent.com/u/37384851?v=4", - "description": "SMILI: Sparse Modeling Imaging Library for Interferometry", + "uid": "github/AncientNLP/potnia", + "url": "https://github.com/AncientNLP/potnia", + "rel": "/software/repository/github/AncientNLP/potnia", + "avatar": "https://avatars.githubusercontent.com/u/159224666?v=4", + "description": "Potnia is an open-source Python library designed to convert Romanized transliterations of ancient texts into Unicode representations of their respective native scripts.", "topics": [] }, { - "uid": "github/NKI-CCB/PRECISE", - "url": "https://github.com/NKI-CCB/PRECISE", - "rel": "/software/repository/github/NKI-CCB/PRECISE", - "avatar": "https://avatars1.githubusercontent.com/u/22322765?v=4", + "uid": "github/maddataanalyst/hextractor", + "url": "https://github.com/maddataanalyst/hextractor", + "rel": "/software/repository/github/maddataanalyst/hextractor", + "avatar": "https://avatars.githubusercontent.com/u/33813997?v=4", "description": null, "topics": [] }, { - "uid": "github/xfangcosmo/FFTLog-and-beyond", - "url": "https://github.com/xfangcosmo/FFTLog-and-beyond", - "rel": "/software/repository/github/xfangcosmo/FFTLog-and-beyond", - "avatar": "https://avatars.githubusercontent.com/u/15255091?v=4", - "description": "An FFTLog code for efficiently computing integrals containing 1 spherical Bessel function or Bessel function or its 1st/2nd derivative.", - "topics": [] - }, - { - "uid": "github/xfangcosmo/2DFFTLog", - "url": "https://github.com/xfangcosmo/2DFFTLog", - "rel": "/software/repository/github/xfangcosmo/2DFFTLog", - "avatar": "https://avatars.githubusercontent.com/u/15255091?v=4", - "description": "2DFFTLog for Covariances from Fourier Space to Real Space", + "uid": "github/hyperopt/hyperopt", + "url": "https://github.com/hyperopt/hyperopt", + "rel": "/software/repository/github/hyperopt/hyperopt", + "avatar": "https://avatars.githubusercontent.com/u/5280805?v=4", + "description": "Distributed Asynchronous Hyperparameter Optimization in Python", "topics": [] }, { - "uid": "github/broadinstitute/gatk", - "url": "https://github.com/broadinstitute/gatk", - "rel": "/software/repository/github/broadinstitute/gatk", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "Official code repository for GATK versions 4 and up", + "uid": "github/AP6YC/AdaptiveResonance.jl", + "url": "https://github.com/AP6YC/AdaptiveResonance.jl", + "rel": "/software/repository/github/AP6YC/AdaptiveResonance.jl", + "avatar": "https://avatars.githubusercontent.com/u/17498866?v=4", + "description": "A Julia package for Adaptive Resonance Theory (ART) algorithms.", "topics": [ - "genomics", - "spark", - "science", - "dna", - "ngs", - "sequencing", - "genome", - "bioinformatics", - "gatk" + "julia", + "machine-learning" ] }, { - "uid": "github/broadinstitute/CellBender", - "url": "https://github.com/broadinstitute/CellBender", - "rel": "/software/repository/github/broadinstitute/CellBender", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.", + "uid": "github/AP6YC/ClusterValidityIndices.jl", + "url": "https://github.com/AP6YC/ClusterValidityIndices.jl", + "rel": "/software/repository/github/AP6YC/ClusterValidityIndices.jl", + "avatar": "https://avatars.githubusercontent.com/u/17498866?v=4", + "description": "A Julia package for Cluster Validity Indices (CVIs).", "topics": [] }, { - "uid": "github/broadinstitute/wot", - "url": "https://github.com/broadinstitute/wot", - "rel": "/software/repository/github/broadinstitute/wot", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "A software package for analyzing snapshots of developmental processes", + "uid": "github/BjoernBiltzinger/pyspi", + "url": "https://github.com/BjoernBiltzinger/pyspi", + "rel": "/software/repository/github/BjoernBiltzinger/pyspi", + "avatar": "https://avatars.githubusercontent.com/u/38947677?v=4", + "description": "Pure python tools for interfacing with INTEGRAL SPI data. It also provides a 3ML plugin for performing full forward folding spectral analysis of GRBs. The documentation with a few examples is available at https://pyspi.readthedocs.io/.", "topics": [ - "single-cell", - "rna-seq", - "time-series", - "trajectory", - "optimal-transport" + "spi-data", + "python", + "3ml" ] }, { - "uid": "github/broadinstitute/Drop-seq", - "url": "https://github.com/broadinstitute/Drop-seq", - "rel": "/software/repository/github/broadinstitute/Drop-seq", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "Java tools for analyzing Drop-seq data", + "uid": "github/Imperial-visualizations/Physics-Visualizations", + "url": "https://github.com/Imperial-visualizations/Physics-Visualizations", + "rel": "/software/repository/github/Imperial-visualizations/Physics-Visualizations", + "avatar": "https://avatars.githubusercontent.com/u/40570406?v=4", + "description": "A computational project at Imperial College London to develop interactive visualizations for education.", "topics": [] }, { - "uid": "github/broadinstitute/cromwell", - "url": "https://github.com/broadinstitute/cromwell", - "rel": "/software/repository/github/broadinstitute/cromwell", - "avatar": "https://avatars0.githubusercontent.com/u/393552?v=4", - "description": "Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments", + "uid": "github/WBK-Robotics/pybullet_industrial", + "url": "https://github.com/WBK-Robotics/pybullet_industrial", + "rel": "/software/repository/github/WBK-Robotics/pybullet_industrial", + "avatar": "https://avatars.githubusercontent.com/u/104063446?v=4", + "description": "A simulation package extending pybullet for industrial robot applications", "topics": [ - "workflow-execution", - "workflow", - "cloud", - "hpc", - "bioinformatics", - "executor", - "scala", - "docker", - "ga4gh", - "containers", - "wdl", - "workflow-description-language", - "cwl", - "common-workflow-language", - "application" + "industrial-automation", + "robotics", + "simulation-framework" ] }, { - "uid": "github/broadinstitute/tensorqtl", - "url": "https://github.com/broadinstitute/tensorqtl", - "rel": "/software/repository/github/broadinstitute/tensorqtl", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "Ultrafast GPU-enabled QTL mapper", + "uid": "github/AemulusProject/bias_emulator", + "url": "https://github.com/AemulusProject/bias_emulator", + "rel": "/software/repository/github/AemulusProject/bias_emulator", + "avatar": "https://avatars.githubusercontent.com/u/38292013?v=4", + "description": "Emulator for the halo bias from The Aemulus Project.", "topics": [] }, { - "uid": "github/broadinstitute/picard", - "url": "https://github.com/broadinstitute/picard", - "rel": "/software/repository/github/broadinstitute/picard", - "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", - "description": "A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.", + "uid": "github/FastMLC/fMLC", + "url": "https://github.com/FastMLC/fMLC", + "rel": "/software/repository/github/FastMLC/fMLC", + "avatar": "https://avatars3.githubusercontent.com/u/29062772?v=4", + "description": null, "topics": [] }, { - "uid": "github/nuc-astro/winnet", - "url": "https://github.com/nuc-astro/WinNet", - "rel": "/software/repository/github/nuc-astro/winnet", - "avatar": "https://avatars.githubusercontent.com/u/35767561?v=4", - "description": "The WinNet nuclear reaction network", - "topics": [ - "astrophysics", - "codes", - "nuclear-physics" - ] + "uid": "github/Pizzuti92/MG-MAMPOSSt", + "url": "https://github.com/Pizzuti92/MG-MAMPOSSt", + "rel": "/software/repository/github/Pizzuti92/MG-MAMPOSSt", + "avatar": "https://avatars.githubusercontent.com/u/80061006?v=4", + "description": "MG-MAMPOSSt is a FORTRAN code that extended the MAMPOSSt algorithm of G. Mamon, A. Biviano and G. Bou\u00e9, that performs Bayesian fits of models of mass and velocity anisotropy profiles to the distribution of tracers in projected phase space, to handle modified gravity models and constrain its parameters. The new version implements two distinct types of gravity modifications, namely general chameleon (including $f(\\mathcal{R})$ models) and beyond Horndeski gravity (Vainshtein screening).", + "topics": [] }, { - "uid": "github/ethankruse/koi3278", - "url": "https://github.com/ethankruse/koi3278", - "rel": "/software/repository/github/ethankruse/koi3278", - "avatar": "https://avatars.githubusercontent.com/u/6944089?v=4", - "description": "Analysis files for the KOI-3278 system", - "topics": [ - "astronomy", - "science" - ] + "uid": "github/rae-holcomb/SpinSpotter", + "url": "https://github.com/rae-holcomb/SpinSpotter", + "rel": "/software/repository/github/rae-holcomb/SpinSpotter", + "avatar": "https://avatars.githubusercontent.com/u/69921202?v=4", + "description": "An automated algorithm to calculate stellar rotation periods from high-cadence photometry.", + "topics": [] }, { - "uid": "github/xiaziyna/PyStarshade", - "url": "https://github.com/xiaziyna/PyStarshade", - "rel": "/software/repository/github/xiaziyna/PyStarshade", - "avatar": "https://avatars.githubusercontent.com/u/79553716?v=4", - "description": "PyStarshade is a Python library for efficient Fresnel optical simulations of direct imaging with an external occulter from stellar system to CCD", + "uid": "github/ajosephy/Clustering", + "url": "https://github.com/ajosephy/Clustering", + "rel": "/software/repository/github/ajosephy/Clustering", + "avatar": "https://avatars.githubusercontent.com/u/12819866?v=4", + "description": "Modified RRATrap + new DBSCAN codes to cluster single pulse events.", "topics": [] }, { - "uid": "github/mchalela/GriSPy", - "url": "https://github.com/mchalela/GriSPy", - "rel": "/software/repository/github/mchalela/GriSPy", - "avatar": "https://avatars.githubusercontent.com/u/26146886?v=4", - "description": "GriSPy is a regular grid search algorithm for quick nearest-neighbor lookup.", + "uid": "github/ashleyblawas/respdetect", + "url": "https://github.com/ashleyblawas/respdetect", + "rel": "/software/repository/github/ashleyblawas/respdetect", + "avatar": "https://avatars.githubusercontent.com/u/33466273?v=4", + "description": "A tool to detect respirations from kinematic data", "topics": [] }, { - "uid": "github/zhoulinumass/ML-wPBE", - "url": "https://github.com/zhoulinumass/ML-wPBE", - "rel": "/software/repository/github/zhoulinumass/ML-wPBE", - "avatar": "https://avatars.githubusercontent.com/u/42041864?v=4", - "description": null, - "topics": [] + "uid": "github/BU-ISCIII/taranis", + "url": "https://github.com/BU-ISCIII/taranis", + "rel": "/software/repository/github/BU-ISCIII/taranis", + "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", + "description": "cg/wgMLST allele calling software, schema evaluation and allele distance estimation for outbreak reserch.", + "topics": [ + "sequencing", + "cgmlst", + "wgmlst", + "mlst", + "bacterial-genomes", + "outbreak-data-analysis", + "outbreak-detection" + ] }, { - "uid": "github/RTIInternational/gobbli", - "url": "https://github.com/RTIInternational/gobbli", - "rel": "/software/repository/github/RTIInternational/gobbli", - "avatar": "https://avatars.githubusercontent.com/u/10167032?v=4", - "description": "Deep learning with text doesn't have to be scary.", + "uid": "github/BU-ISCIII/plasmidID", + "url": "https://github.com/BU-ISCIII/plasmidID", + "rel": "/software/repository/github/BU-ISCIII/plasmidID", + "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", + "description": "PlasmidID is a mapping-based, assembly-assisted plasmid identification tool that analyzes and gives graphic solution for plasmid identification.", "topics": [ - "docker", - "deep-learning", - "python", - "nlp" + "plasmid", + "ngs", + "ngs-analysis", + "microbiology", + "whole-genome-sequencing" ] }, { - "uid": "github/the-rccg/hw2d", - "url": "https://github.com/the-rccg/hw2d", - "rel": "/software/repository/github/the-rccg/hw2d", - "avatar": "https://avatars.githubusercontent.com/u/28964733?v=4", - "description": "Reference implementation for the Hasegawa-Wakatani model of plasma turbulence inside nuclear fusion reactors in two dimensions", + "uid": "github/BU-ISCIII/iSkyLIMS", + "url": "https://github.com/BU-ISCIII/iSkyLIMS", + "rel": "/software/repository/github/BU-ISCIII/iSkyLIMS", + "avatar": "https://avatars.githubusercontent.com/u/29040266?v=4", + "description": "is an open-source LIMS (laboratory Information Management System) for Next Generation Sequencing sample management, statistics and reports, and bioinformatics analysis service management.", "topics": [ - "fluid-dynamics", - "fluid-simulation", - "fusion", - "plasma-physics", - "simulations" + "bioinformatics-analysis", + "lims", + "workflow", + "ngs-analysis", + "ngs", + "ngs-data" ] }, { - "uid": "github/josegit88/SCORPIO", - "url": "https://github.com/josegit88/SCORPIO", - "rel": "/software/repository/github/josegit88/SCORPIO", - "avatar": "https://avatars.githubusercontent.com/u/56035386?v=4", - "description": "Sky COllector of galaxy Pairs and Image Output", + "uid": "github/cpiaulet/smint", + "url": "https://github.com/cpiaulet/smint", + "rel": "/software/repository/github/cpiaulet/smint", + "avatar": "https://avatars.githubusercontent.com/u/38121553?v=4", + "description": "Planet structure model interpolator", "topics": [] }, { - "uid": "github/tobias-dv-lnu/s4rdm3x", - "url": "https://github.com/tobias-dv-lnu/s4rdm3x", - "rel": "/software/repository/github/tobias-dv-lnu/s4rdm3x", - "avatar": "https://avatars.githubusercontent.com/u/3469312?v=4", + "uid": "github/spexod/iSLAT", + "url": "https://github.com/spexod/iSLAT", + "rel": "/software/repository/github/spexod/iSLAT", + "avatar": "https://avatars.githubusercontent.com/u/107328517?v=4", "description": null, - "topics": [ - "java", - "clustering-algorithm", - "imgui", - "gnu-gplv3" - ] + "topics": [] }, { - "uid": "github/aymgal/COOLEST", - "url": "https://github.com/aymgal/COOLEST", - "rel": "/software/repository/github/aymgal/COOLEST", - "avatar": "https://avatars.githubusercontent.com/u/10706063?v=4", - "description": "Standard for strong gravitational lensing studies", + "uid": "github/PhaseTracer/PhaseTracer", + "url": "https://github.com/PhaseTracer/PhaseTracer", + "rel": "/software/repository/github/PhaseTracer/PhaseTracer", + "avatar": "https://avatars.githubusercontent.com/u/61768455?v=4", + "description": "PhaseTracer is a C++ software package for mapping out cosmological phases, and potential transitions between them, for Standard Model extensions with any number of scalar fields.", + "topics": [] + }, + { + "uid": "github/PEREGRINE-GW/saqqara", + "url": "https://github.com/PEREGRINE-GW/saqqara", + "rel": "/software/repository/github/PEREGRINE-GW/saqqara", + "avatar": "https://avatars.githubusercontent.com/u/140732115?v=4", + "description": " A simulation-based Inference (SBI) library designed for stochastic gravitational wave background data analysis", + "topics": [] + }, + { + "uid": "github/PEREGRINE-GW/peregrine", + "url": "https://github.com/PEREGRINE-GW/peregrine", + "rel": "/software/repository/github/PEREGRINE-GW/peregrine", + "avatar": "https://avatars.githubusercontent.com/u/140732115?v=4", + "description": "A simulation-based Inference (SBI) library designed to perform analysis on a wide class of gravitational wave signals", "topics": [ - "astrophysics", - "gravitational-lensing", - "lens-modeling", - "standardization" + "algorithm", + "gravitational-waves", + "inference", + "machine-learning", + "neural-ratio-estimation", + "parameter-estimation", + "python", + "pytorch-lightning", + "simulation-based-inference" ] }, { - "uid": "github/PeterDenton/ANA", - "url": "https://github.com/PeterDenton/ANA", - "rel": "/software/repository/github/PeterDenton/ANA", - "avatar": "https://avatars.githubusercontent.com/u/1834435?v=4", - "description": "Astrophysical Neutrino Anisotropy", + "uid": "github/brainets/frites", + "url": "https://github.com/brainets/frites", + "rel": "/software/repository/github/brainets/frites", + "avatar": "https://avatars.githubusercontent.com/u/47176497?v=4", + "description": "Framework for Information Theoretical analysis of Electrophysiological data and Statistics", "topics": [ - "icecube", - "neutrino", - "anisotropy", - "arxiv", - "physics", - "astroparticle-physics", - "markov-chain-monte-carlo", - "galactic", - "extragalactic" + "information-theory", + "electrophysiological-data", + "statistics", + "group-level", + "rfx", + "ffx", + "gaussian-copula", + "cluster-based", + "neurophysiological-data", + "functional-connectivity", + "brainweb" ] }, { - "uid": "github/tseemann/mlst", - "url": "https://github.com/tseemann/mlst", - "rel": "/software/repository/github/tseemann/mlst", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":id: Scan contig files against PubMLST typing schemes", - "topics": [] + "uid": "github/miguelcarcamov/csromer", + "url": "https://github.com/miguelcarcamov/csromer", + "rel": "/software/repository/github/miguelcarcamov/csromer", + "avatar": "https://avatars.githubusercontent.com/u/5432126?v=4", + "description": "Compressive Sensing and Optimization Framework to reconstruct Faraday Depth signals", + "topics": [ + "faraday-rotation", + "faraday-depth", + "compressed-sensing", + "python", + "framework", + "linear-polarization", + "object-oriented", + "object-oriented-programming", + "faraday-tomography", + "signal-reconstruction", + "magnetic-fields", + "astronomy-astrophysics", + "astrophysics" + ] }, { - "uid": "github/tseemann/barrnap", - "url": "https://github.com/tseemann/barrnap", - "rel": "/software/repository/github/tseemann/barrnap", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":microscope: :leo: Bacterial ribosomal RNA predictor", + "uid": "github/miguelcarcamov/gpuvmem", + "url": "https://github.com/miguelcarcamov/gpuvmem", + "rel": "/software/repository/github/miguelcarcamov/gpuvmem", + "avatar": "https://avatars.githubusercontent.com/u/5432126?v=4", + "description": "GPU Framework for Radio Astronomical Image Synthesis", "topics": [ - "rna", - "hmmer", - "rnammer", - "hmm-model", - "rrna", - "annotations", - "ribosomal" + "telescope", + "gpu-computing", + "gpu-acceleration", + "multi-gpu", + "alma", + "ska", + "vla", + "astronomical-images", + "astronomy", + "astrophysics", + "optimization-methods", + "complex-systems", + "radioastronomy", + "maximum-entropy", + "astronomical-algorithms", + "image-synthesis", + "cuda", + "radio-imaging", + "radio-interferometry", + "gpu" ] }, { - "uid": "github/tseemann/samclip", - "url": "https://github.com/tseemann/samclip", - "rel": "/software/repository/github/tseemann/samclip", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": "Filter SAM file for soft and hard clipped alignments", + "uid": "github/markmbaum/GEOCLIM.jl", + "url": "https://github.com/markmbaum/GEOCLIM.jl", + "rel": "/software/repository/github/markmbaum/GEOCLIM.jl", + "avatar": "https://avatars.githubusercontent.com/u/18745581?v=4", + "description": "Estimation of global silicate weathering for paleoclimate and exoplanet climate applications", + "topics": [ + "climate", + "weathering", + "paleoclimate", + "julia", + "exoplanets" + ] + }, + { + "uid": "github/narunlifescience/runcircos-gui", + "url": "https://github.com/narunlifescience/runcircos-gui", + "rel": "/software/repository/github/narunlifescience/runcircos-gui", + "avatar": "https://avatars.githubusercontent.com/u/11949260?v=4", + "description": ":radio_button: GUI tool to run circos", "topics": [] }, { - "uid": "github/tseemann/abricate", - "url": "https://github.com/tseemann/abricate", - "rel": "/software/repository/github/tseemann/abricate", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":mag_right: :pill: Mass screening of contigs for antimicrobial and virulence genes", + "uid": "github/mind-inria/mri-nufft", + "url": "https://github.com/mind-inria/mri-nufft", + "rel": "/software/repository/github/mind-inria/mri-nufft", + "avatar": "https://avatars.githubusercontent.com/u/118902559?v=4", + "description": "Doing non-Cartesian MR Imaging has never been so easy.", "topics": [ - "antimicrobial-resistance-genes", - "virulence-genes", - "contigs", - "bioinformatics-tool", - "genomic-regions" + "cuda", + "gpu", + "mri", + "mri-reconstruction", + "nufft", + "tensorflow", + "numerical-methods", + "numpy", + "torch" ] }, { - "uid": "github/tseemann/shovill", - "url": "https://github.com/tseemann/shovill", - "rel": "/software/repository/github/tseemann/shovill", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": "\u26a1\u2660\ufe0f Assemble bacterial isolate genomes from Illumina paired-end reads", + "uid": "github/snowformatics/macrobot", + "url": "https://github.com/snowformatics/macrobot", + "rel": "/software/repository/github/snowformatics/macrobot", + "avatar": "https://avatars3.githubusercontent.com/u/5192670?v=4", + "description": "Macrobot is an open source image analysis software for studying plant-pathogen interactions on macroscopic level.", "topics": [ - "genome-assembler", - "illumina-sequencing", - "pipelines" + "plant-pathogen-interactions", + "image-analysis", + "python", + "computer-vision" ] }, { - "uid": "github/tseemann/VelvetOptimiser", - "url": "https://github.com/tseemann/VelvetOptimiser", - "rel": "/software/repository/github/tseemann/VelvetOptimiser", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":chart_with_upwards_trend: Automatically optimise three of Velvet's assembly parameters.", + "uid": "github/pennsignals/chime", + "url": "https://github.com/pennsignals/chime", + "rel": "/software/repository/github/pennsignals/chime", + "avatar": "https://avatars.githubusercontent.com/u/24457487?v=4", + "description": "COVID-19 Hospital Impact Model for Epidemics", "topics": [] }, { - "uid": "github/tseemann/snippy", - "url": "https://github.com/tseemann/snippy", - "rel": "/software/repository/github/tseemann/snippy", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":scissors: :zap: Rapid haploid variant calling and core genome alignment", + "uid": "github/KULL-Centre/DEERpredict", + "url": "https://github.com/KULL-Centre/DEERpredict", + "rel": "/software/repository/github/KULL-Centre/DEERpredict", + "avatar": "https://avatars.githubusercontent.com/u/45874707?v=4", + "description": "Software for the prediction of DEER and PRE data from conformational ensembles.", "topics": [ - "variant-calling", - "haploid", - "bacteria", - "fastq-analysis", - "snps", - "vcf", - "indel-discovery" + "deer", + "epr", + "nmr-spectroscopy", + "molecular-simulation", + "biophysics" ] }, { - "uid": "github/tseemann/snp-dists", - "url": "https://github.com/tseemann/snp-dists", - "rel": "/software/repository/github/tseemann/snp-dists", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": "Pairwise SNP distance matrix from a FASTA sequence alignment", + "uid": "github/scipy/scipy", + "url": "https://github.com/scipy/scipy", + "rel": "/software/repository/github/scipy/scipy", + "avatar": "https://avatars2.githubusercontent.com/u/288277?v=4", + "description": "Scipy library main repository", "topics": [] }, { - "uid": "github/tseemann/prokka", - "url": "https://github.com/tseemann/prokka", - "rel": "/software/repository/github/tseemann/prokka", - "avatar": "https://avatars.githubusercontent.com/u/453972?v=4", - "description": ":zap: :aquarius: Rapid prokaryotic genome annotation", + "uid": "github/munich-quantum-toolkit/core", + "url": "https://github.com/munich-quantum-toolkit/core", + "rel": "/software/repository/github/munich-quantum-toolkit/core", + "avatar": "https://avatars.githubusercontent.com/u/177826161?v=4", + "description": "MQT Core - The Backbone of the Munich Quantum Toolkit", "topics": [ - "genome-annotation", - "functional-assignment", - "bacterial-genomes", - "gene-finding" + "quantum-computing", + "quantum-intermediate-representation", + "mqt", + "tum" ] }, { - "uid": "github/stevertaylor/gw_pta_emulator", - "url": "https://github.com/stevertaylor/gw_pta_emulator", - "rel": "/software/repository/github/stevertaylor/gw_pta_emulator", - "avatar": "https://avatars.githubusercontent.com/u/5446644?v=4", - "description": "A notebook and data associated with the paper Taylor, Simon, Sampson (2017)", + "uid": "github/winger/hawking_net", + "url": "https://github.com/winger/hawking_net", + "rel": "/software/repository/github/winger/hawking_net", + "avatar": "https://avatars.githubusercontent.com/u/734585?v=4", + "description": null, "topics": [] }, { - "uid": "github/theosanderson/chronumental", - "url": "https://github.com/theosanderson/chronumental", - "rel": "/software/repository/github/theosanderson/chronumental", - "avatar": "https://avatars.githubusercontent.com/u/19732295?v=4", - "description": "Estimating time trees from very large phylogenies", + "uid": "github/tresoldi/ngesh", + "url": "https://github.com/tresoldi/ngesh", + "rel": "/software/repository/github/tresoldi/ngesh", + "avatar": "https://avatars.githubusercontent.com/u/437239?v=4", + "description": "A Python library for generating random phylogenetic trees and related data", + "topics": [] + }, + { + "uid": "github/Junwu302/HiFun", + "url": "https://github.com/Junwu302/HiFun", + "rel": "/software/repository/github/Junwu302/HiFun", + "avatar": "https://avatars.githubusercontent.com/u/49974219?v=4", + "description": "Homology Independent Protein Function prediction on Protein-Language Self-Attention Model", + "topics": [] + }, + { + "uid": "github/iipharma/pharmamind-molminer", + "url": "https://github.com/iipharma/pharmamind-molminer", + "rel": "/software/repository/github/iipharma/pharmamind-molminer", + "avatar": "https://avatars.githubusercontent.com/u/106510298?v=4", + "description": "PharmaMind\u00ae is an innovative drug discovery platform that integrates advanced artificial intelligence and computational simulation design techniques, which is suitable for real-world novel drug R&D.", + "topics": [] + }, + { + "uid": "github/jGetMove/jGetMove", + "url": "https://github.com/jGetMove/jGetMove", + "rel": "/software/repository/github/jGetMove/jGetMove", + "avatar": "https://avatars.githubusercontent.com/u/25670842?v=4", + "description": "GetMove algorithm in java", "topics": [ - "phylogenetics", - "timetree", - "jax", - "numpyro" + "java", + "getmove", + "clustering-algorithm" ] }, { - "uid": "github/NeuralEnsemble/PyNN", - "url": "https://github.com/NeuralEnsemble/PyNN", - "rel": "/software/repository/github/NeuralEnsemble/PyNN", - "avatar": "https://avatars.githubusercontent.com/u/1540309?v=4", - "description": "A Python package for simulator-independent specification of neuronal network models.", + "uid": "github/insilico/cncv", + "url": "https://github.com/insilico/cncv", + "rel": "/software/repository/github/insilico/cncv", + "avatar": "https://avatars.githubusercontent.com/u/412493?v=4", + "description": "Consensus Nested Cross-Validation", "topics": [] }, { - "uid": "github/NeuralEnsemble/elephant", - "url": "https://github.com/NeuralEnsemble/elephant", - "rel": "/software/repository/github/NeuralEnsemble/elephant", - "avatar": "https://avatars3.githubusercontent.com/u/1540309?v=4", - "description": "Elephant is the Electrophysiology Analysis Toolkit", + "uid": "github/PatrickJTaylor/pengWann", + "url": "https://github.com/PatrickJTaylor/pengWann", + "rel": "/software/repository/github/PatrickJTaylor/pengWann", + "avatar": "https://avatars.githubusercontent.com/u/52406436?v=4", + "description": "A lightweight Python package for calculating descriptors of chemical bonding and local electronic structure from Wannier functions.", "topics": [ + "chemical-bonding", "python", - "data-analysis", - "electrophysiology", - "neurophysiology", - "neuroscience", - "statistics", - "hacktoberfest" + "wannier-functions" ] }, { - "uid": "github/nla-group/fABBA", - "url": "https://github.com/nla-group/fABBA", - "rel": "/software/repository/github/nla-group/fABBA", - "avatar": "https://avatars.githubusercontent.com/u/50701217?v=4", - "description": "A Python library for the fast symbolic approximation of time series", - "topics": [ - "machine-learning", - "dimensionality-reduction", - "time-series", - "time-series-analysis", - "time-series-forecasting", - "time-series-classification", - "time-series-clustering", - "symbolic-aggregate-approximation", - "symbolic-representation" - ] + "uid": "github/patscott/gambit_1.3", + "url": "https://github.com/GambitBSM/gambit_1.3", + "rel": "/software/repository/github/patscott/gambit_1.3", + "avatar": "https://avatars.githubusercontent.com/u/66944692?v=4", + "description": "GAMBIT: The Global and Modular Beyond-the-Standard-Model Inference Tool", + "topics": [] }, { - "uid": "github/snfactory/binaryoffset", - "url": "https://github.com/snfactory/binaryoffset", - "rel": "/software/repository/github/snfactory/binaryoffset", - "avatar": "https://avatars.githubusercontent.com/u/10949696?v=4", - "description": "Detecting and Correcting the Binary Offset Effect in CCDs", + "uid": "github/patscott/ddcalc", + "url": "https://github.com/patscott/DDCalc", + "rel": "/software/repository/github/patscott/ddcalc", + "avatar": "https://avatars.githubusercontent.com/u/1249657?v=4", + "description": "Dark matter direct detection phenomenology package", "topics": [] }, { - "uid": "github/jonathansick/skyoffset", - "url": "https://github.com/jonathansick/skyoffset", - "rel": "/software/repository/github/jonathansick/skyoffset", - "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", - "description": "Sky offset optimization and mosaicing toolkit used by ANDROIDS", + "uid": "github/patscott/pippi", + "url": "https://github.com/patscott/pippi", + "rel": "/software/repository/github/patscott/pippi", + "avatar": "https://avatars.githubusercontent.com/u/1249657?v=4", + "description": "Pippi: parse it, plot it. A program for operating on MCMC chains and related lists of samples from a function or distribution.", "topics": [] }, { - "uid": "github/jonathansick/MoAstro", - "url": "https://github.com/jonathansick/MoAstro", - "rel": "/software/repository/github/jonathansick/MoAstro", - "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", - "description": "MongoDB framework for observational astronomy", + "uid": "github/AprilYuge/ResPAN", + "url": "https://github.com/AprilYuge/ResPAN", + "rel": "/software/repository/github/AprilYuge/ResPAN", + "avatar": "https://avatars.githubusercontent.com/u/42819288?v=4", + "description": "a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction", "topics": [] }, { - "uid": "github/jonathansick/starfish", - "url": "https://github.com/jonathansick/starfish", - "rel": "/software/repository/github/jonathansick/starfish", - "avatar": "https://avatars.githubusercontent.com/u/349384?v=4", - "description": "GitHub StarFISH mirror (with patches)", + "uid": "github/shinichiroando/sashimi-c", + "url": "https://github.com/shinichiroando/sashimi-c", + "rel": "/software/repository/github/shinichiroando/sashimi-c", + "avatar": "https://avatars.githubusercontent.com/u/3914962?v=4", + "description": null, "topics": [] }, { - "uid": "github/narunlifescience/runcircos-gui", - "url": "https://github.com/narunlifescience/runcircos-gui", - "rel": "/software/repository/github/narunlifescience/runcircos-gui", - "avatar": "https://avatars.githubusercontent.com/u/11949260?v=4", - "description": ":radio_button: GUI tool to run circos", + "uid": "github/shinichiroando/sashimi-w", + "url": "https://github.com/shinichiroando/sashimi-w", + "rel": "/software/repository/github/shinichiroando/sashimi-w", + "avatar": "https://avatars.githubusercontent.com/u/3914962?v=4", + "description": null, "topics": [] }, { - "uid": "github/cdalvaro/machine-learning-master-thesis", - "url": "https://github.com/cdalvaro/machine-learning-master-thesis", - "rel": "/software/repository/github/cdalvaro/machine-learning-master-thesis", - "avatar": "https://avatars.githubusercontent.com/u/16347742?v=4", - "description": "\u2728\ud83d\udef0 Machine Learning Tools for Open Cluster Characterization with Gaia DR2 Data", + "uid": "github/freqtrade/freqtrade", + "url": "https://github.com/freqtrade/freqtrade", + "rel": "/software/repository/github/freqtrade/freqtrade", + "avatar": "https://avatars.githubusercontent.com/u/37536846?v=4", + "description": "Free, open source crypto trading bot", "topics": [ - "gaiadr2", - "machine-learning", - "open-clusters", - "gaia-dr2", - "mission-gaia", - "deep-embedded-clustering", - "dec", - "open-clusters-characterization" + "python", + "cryptocurrencies", + "trading-bot", + "telegram-bot", + "bitcoin", + "trade", + "cryptocurrency", + "algorithmic-trading", + "freqtrade" ] }, { - "uid": "github/YesselmanLab/rna_map", - "url": "https://github.com/YesselmanLab/rna_map", - "rel": "/software/repository/github/YesselmanLab/rna_map", - "avatar": "https://avatars.githubusercontent.com/u/59420481?v=4", - "description": "tools to do mutational profiling (MaP) analysis for RNA chemical mapping experiments.", - "topics": [] + "uid": "github/danielkoll/PyRADS", + "url": "https://github.com/danielkoll/PyRADS", + "rel": "/software/repository/github/danielkoll/PyRADS", + "avatar": "https://avatars.githubusercontent.com/u/43180124?v=4", + "description": "A line-by-line longwave radiation code for planetary atmospheres.", + "topics": [ + "two-stream", + "longwave", + "line-by-line", + "radiative-transfer", + "radiation", + "atmosphere", + "python", + "olr", + "planetary-atmospheres", + "surface-temperature", + "compute-olrs", + "longwave-radiation" + ] }, { - "uid": "github/mwalmsley/zoobot", - "url": "https://github.com/mwalmsley/zoobot", - "rel": "/software/repository/github/mwalmsley/zoobot", - "avatar": "https://avatars.githubusercontent.com/u/7740526?v=4", - "description": "Classifies galaxy morphology with Bayesian CNN", + "uid": "github/danielkoll/tidally-locked-coordinates", + "url": "https://github.com/danielkoll/tidally-locked-coordinates", + "rel": "/software/repository/github/danielkoll/tidally-locked-coordinates", + "avatar": "https://avatars.githubusercontent.com/u/43180124?v=4", + "description": "Scripts for transforming GCM output into a tidally locked coordinate system.", "topics": [] }, { - "uid": "github/joboog/r2ogs6", - "url": "https://github.com/joboog/r2ogs6", - "rel": "/software/repository/github/joboog/r2ogs6", - "avatar": "https://avatars.githubusercontent.com/u/24472234?v=4", - "description": "R-API to the multiphysics simulator OpenGeoSys 6. THIS IS A MIRROR OF: https://gitlab.opengeosys.org/ogs/tools/r2ogs6", - "topics": [ - "geoscience", - "hydrogeology", - "hydrology", - "multi-physics", - "opengeosys", - "porous-media-flow", - "r", - "transport-modelling" - ] - }, - { - "uid": "github/patscott/pippi", - "url": "https://github.com/patscott/pippi", - "rel": "/software/repository/github/patscott/pippi", - "avatar": "https://avatars.githubusercontent.com/u/1249657?v=4", - "description": "Pippi: parse it, plot it. A program for operating on MCMC chains and related lists of samples from a function or distribution.", + "uid": "github/sina-cb/Tn-seqExplorer", + "url": "https://github.com/sina-cb/Tn-seqExplorer", + "rel": "/software/repository/github/sina-cb/Tn-seqExplorer", + "avatar": "https://avatars.githubusercontent.com/u/1153540?v=4", + "description": "Tn-seq Explorer allows users to explore and analyze Tn-seq data for prokaryotic (bacterial or archaeal) genomes. It implements two alternative methods for identification of essential genes and provides additional tools to investigate the Tn-seq data. The primary goal of the data analysis is to study fitness by identifying genes that are essential or beneficial under specific growth conditions.", "topics": [] }, { - "uid": "github/patscott/gambit_1.3", - "url": "https://github.com/GambitBSM/gambit_1.3", - "rel": "/software/repository/github/patscott/gambit_1.3", - "avatar": "https://avatars.githubusercontent.com/u/66944692?v=4", - "description": "GAMBIT: The Global and Modular Beyond-the-Standard-Model Inference Tool", + "uid": "github/gijut/gnucash", + "url": "https://github.com/gijut/gnucash", + "rel": "/software/repository/github/gijut/gnucash", + "avatar": "https://avatars2.githubusercontent.com/u/12998308?v=4", + "description": "Public Mirror of code.gnucash.org/gnucash", "topics": [] }, { - "uid": "github/patscott/ddcalc", - "url": "https://github.com/patscott/DDCalc", - "rel": "/software/repository/github/patscott/ddcalc", - "avatar": "https://avatars.githubusercontent.com/u/1249657?v=4", - "description": "Dark matter direct detection phenomenology package", + "uid": "github/FZJ-PGI-12/QAOA.jl", + "url": "https://github.com/FZJ-PGI-12/QAOA.jl", + "rel": "/software/repository/github/FZJ-PGI-12/QAOA.jl", + "avatar": "https://avatars.githubusercontent.com/u/123086565?v=4", + "description": null, "topics": [] }, { - "uid": "github/martin3141/spant", - "url": "https://github.com/martin3141/spant", - "rel": "/software/repository/github/martin3141/spant", - "avatar": "https://avatars.githubusercontent.com/u/7724002?v=4", - "description": "Tools for reading, visualising and processing Magnetic Resonance Spectroscopy data", + "uid": "github/dpalmasan/TRUNAJOD2.0", + "url": "https://github.com/dpalmasan/TRUNAJOD2.0", + "rel": "/software/repository/github/dpalmasan/TRUNAJOD2.0", + "avatar": "https://avatars.githubusercontent.com/u/8723534?v=4", + "description": "An easy-to-use library to extract indices from texts.", "topics": [ - "cran", - "mrs", - "spectroscopy", - "mri", - "brain", - "mrshub" + "semantic-measurements", + "coherence", + "text-analysis", + "natural-language-processing", + "readability-metrics", + "text-processing", + "ttr", + "spacy", + "text-mining", + "spacy-extensions", + "cohesion", + "entity-graph", + "lexical-diversity", + "type-token-ratio" ] }, { - "uid": "github/viash-io/viash", - "url": "https://github.com/viash-io/viash", - "rel": "/software/repository/github/viash-io/viash", - "avatar": "https://avatars.githubusercontent.com/u/81986038?v=4", - "description": "script + metadata = standalone component", + "uid": "github/afarahi/PoPE", + "url": "https://github.com/afarahi/PoPE", + "rel": "/software/repository/github/afarahi/PoPE", + "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", + "description": "Population Profile Estimator", "topics": [] }, { - "uid": "github/Anirbancosmo/limpy", - "url": "https://github.com/Anirbancosmo/Limpy", - "rel": "/software/repository/github/Anirbancosmo/limpy", - "avatar": "https://avatars.githubusercontent.com/u/56548789?v=4", - "description": "A python package for multi-line intensity mapping", - "topics": [] + "uid": "github/afarahi/kllr", + "url": "https://github.com/afarahi/kllr", + "rel": "/software/repository/github/afarahi/kllr", + "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", + "description": "Kernel Localized Linear Regression (KLLR)", + "topics": [ + "linear-regression", + "linear-model", + "kernel-methods", + "regression", + "localized-linear-regression" + ] }, { - "uid": "github/veragluscevic/dmdd", - "url": "https://github.com/veragluscevic/dmdd", - "rel": "/software/repository/github/veragluscevic/dmdd", - "avatar": "https://avatars.githubusercontent.com/u/9042052?v=4", - "description": "A python package that enables simple simulation and Bayesian posterior analysis of nuclear-recoil data from dark matter direct detection experiments for a wide variety of theories of dark matter-nucleon interactions.", + "uid": "github/afarahi/tatter", + "url": "https://github.com/afarahi/tatter", + "rel": "/software/repository/github/afarahi/tatter", + "avatar": "https://avatars.githubusercontent.com/u/1308461?v=4", + "description": "TATTER (Two-sAmple TesT EstimatoR) is a tool to perform two-sample hypothesis test.", + "topics": [ + "kullback-leibler-divergence", + "mmd", + "two-sample-test", + "two-sample-statistics", + "posterior-predictive" + ] + }, + { + "uid": "github/sims-lab/CapCruncher", + "url": "https://github.com/sims-lab/CapCruncher", + "rel": "/software/repository/github/sims-lab/CapCruncher", + "avatar": "https://avatars.githubusercontent.com/u/52532825?v=4", + "description": "Analysis tool for NG-Capture-C, Tri-C and Tiled-C data", "topics": [] }, { - "uid": "github/yanzhanglab/Graph2GO", - "url": "https://github.com/yanzhanglab/Graph2GO", - "rel": "/software/repository/github/yanzhanglab/Graph2GO", - "avatar": "https://avatars1.githubusercontent.com/u/31453876?v=4", - "description": "Graph-based representation learning method for protein function prediction", + "uid": "github/pirl-unc/ace", + "url": "https://github.com/pirl-unc/ace", + "rel": "/software/repository/github/pirl-unc/ace", + "avatar": "https://avatars.githubusercontent.com/u/71463575?v=4", + "description": null, "topics": [] }, { - "uid": "github/SpectraCollab/ORMIR_XCT", - "url": "https://github.com/SpectraCollab/ORMIR_XCT", - "rel": "/software/repository/github/SpectraCollab/ORMIR_XCT", - "avatar": "https://avatars.githubusercontent.com/u/107300107?v=4", - "description": "Code developed at the 2022 ORMIR workshop in Maastricht, Netherlands", + "uid": "github/caselawanalytics/CaseLawAnalytics", + "url": "https://github.com/caselawanalytics/CaseLawAnalytics", + "rel": "/software/repository/github/caselawanalytics/CaseLawAnalytics", + "avatar": "https://avatars1.githubusercontent.com/u/30318106?v=4", + "description": null, "topics": [] }, { - "uid": "github/deephyper/deephyper", - "url": "https://github.com/deephyper/deephyper", - "rel": "/software/repository/github/deephyper/deephyper", - "avatar": "https://avatars.githubusercontent.com/u/44810957?v=4", - "description": "DeepHyper: Scalable Asynchronous Neural Architecture and Hyperparameter Search for Deep Neural Networks", + "uid": "github/r-spatialecology/shar", + "url": "https://github.com/r-spatialecology/shar", + "rel": "/software/repository/github/r-spatialecology/shar", + "avatar": "https://avatars.githubusercontent.com/u/42056187?v=4", + "description": ":package: Analyse species-habitat associations in R", "topics": [ - "automl", - "scalability", - "neural-architecture-search", - "hyperparameter-optimization", - "python", - "tensorflow", - "keras", - "deep-learning", - "hpc", - "machine-learning", - "multi-fidelity", - "pytorch", - "uncertainty-quantification", - "mpi", - "raylib" + "landscape-ecology", + "point-pattern-analysis", + "spatial-analysis", + "habitat-association" ] }, { - "uid": "github/donishadsmith/neurocaps", - "url": "https://github.com/donishadsmith/neurocaps", - "rel": "/software/repository/github/donishadsmith/neurocaps", - "avatar": "https://avatars.githubusercontent.com/u/112973674?v=4", - "description": "A Python package for performing Co-Activation Patterns (CAPs) analyses on resting-state and task-based fMRI data.", - "topics": [ - "neuroimaging", - "fmri", - "kmeans", - "fmriprep", - "python", - "dynamic-functional-connectivity", - "co-activation-patterns" - ] + "uid": "github/nvanalfen/halotools", + "url": "https://github.com/nvanalfen/halotools", + "rel": "/software/repository/github/nvanalfen/halotools", + "avatar": "https://avatars.githubusercontent.com/u/26467203?v=4", + "description": "Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models", + "topics": [] + }, + { + "uid": "github/BrockWW/BubbleFindingAlgorithm", + "url": "https://github.com/BrockWW/BubbleFindingAlgorithm", + "rel": "/software/repository/github/BrockWW/BubbleFindingAlgorithm", + "avatar": "https://avatars.githubusercontent.com/u/89614213?v=4", + "description": "Repository for developed algorithm used to find and measure supernovae bubbles in galaxy column density images.", + "topics": [] + }, + { + "uid": "github/UoMMIB/TFBMiner", + "url": "https://github.com/UoMMIB/TFBMiner", + "rel": "/software/repository/github/UoMMIB/TFBMiner", + "avatar": "https://avatars.githubusercontent.com/u/65022631?v=4", + "description": "TFBMiner is a data acquisition and analysis pipeline for the rapid identification of putative transcription factor-based biosensors.", + "topics": [] }, { - "uid": "github/BradGreig/21CMMC", - "url": "https://github.com/BradGreig/21CMMC", - "rel": "/software/repository/github/BradGreig/21CMMC", - "avatar": "https://avatars.githubusercontent.com/u/16087482?v=4", - "description": "A parallelised, Monte Carlo Markov Chain analysis tool for the epoch of reionisation (EoR)", + "uid": "github/ncbi/igblast", + "url": "https://github.com/ncbi/igblast", + "rel": "/software/repository/github/ncbi/igblast", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "Immunoglobulin and T cell receptor variable domain sequence analysis", "topics": [] }, { - "uid": "github/Ouranosinc/xclim", - "url": "https://github.com/Ouranosinc/xclim", - "rel": "/software/repository/github/Ouranosinc/xclim", - "avatar": "https://avatars.githubusercontent.com/u/1696763?v=4", - "description": "Library of derived climate variables, ie climate indicators, based on xarray. ", - "topics": [ - "climate-analysis", - "climate-science", - "python", - "xarray", - "icclim", - "netcdf4", - "xclim", - "anuclim", - "dask" - ] + "uid": "github/ncbi/SKESA", + "url": "https://github.com/ncbi/SKESA", + "rel": "/software/repository/github/ncbi/SKESA", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "SKESA assembler", + "topics": [] }, { - "uid": "github/astroboylrx/Rubble", - "url": "https://github.com/astroboylrx/Rubble", - "rel": "/software/repository/github/astroboylrx/Rubble", - "avatar": "https://avatars.githubusercontent.com/u/3999966?v=4", - "description": "Rubble: an implicit coagulation code for simulating solid size distribution evolution in protoplanetary disks", + "uid": "github/ncbi/sra-tools", + "url": "https://github.com/ncbi/sra-tools", + "rel": "/software/repository/github/ncbi/sra-tools", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "SRA Tools", "topics": [] }, { - "uid": "github/astroboylrx/PLAN", - "url": "https://github.com/astroboylrx/PLAN", - "rel": "/software/repository/github/astroboylrx/PLAN", - "avatar": "https://avatars.githubusercontent.com/u/3999966?v=4", - "description": "PLAN: PLanetesimal ANalyzer", - "topics": [ - "astronomy", - "astrophysics", - "athena", - "particles", - "barnes-hut", - "3d", - "vtk", - "mpi", - "openmp", - "cmake" - ] + "uid": "github/ncbi/ncbi-vdb", + "url": "https://github.com/ncbi/ncbi-vdb", + "rel": "/software/repository/github/ncbi/ncbi-vdb", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "ncbi-vdb", + "topics": [] }, { - "uid": "github/peterk87/sistr_cmd", - "url": "https://github.com/phac-nml/sistr_cmd", - "rel": "/software/repository/github/peterk87/sistr_cmd", - "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", - "description": "SISTR (Salmonella In Silico Typing Resource) command-line tool", + "uid": "github/ncbi/TPMCalculator", + "url": "https://github.com/ncbi/TPMCalculator", + "rel": "/software/repository/github/ncbi/TPMCalculator", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "TPMCalculator quantifies mRNA abundance directly from the alignments by parsing BAM files", "topics": [ - "bioinformatics", - "serotyping", - "salmonella", - "cgmlst", - "sistr" + "ngs", + "rna-seq", + "tpm" ] }, { - "uid": "github/daeken/Emokit", - "url": "https://github.com/daeken/Emokit", - "rel": "/software/repository/github/daeken/Emokit", - "avatar": "https://avatars.githubusercontent.com/u/2359?v=4", - "description": "Python library for the Emotiv EPOC headset", + "uid": "github/ncbi/datasets", + "url": "https://github.com/ncbi/datasets", + "rel": "/software/repository/github/ncbi/datasets", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "NCBI Datasets is an experimental resource for finding and building datasets", "topics": [] }, { - "uid": "github/salbalkus/CausalTables.jl", - "url": "https://github.com/salbalkus/CausalTables.jl", - "rel": "/software/repository/github/salbalkus/CausalTables.jl", - "avatar": "https://avatars.githubusercontent.com/u/45985925?v=4", - "description": "A new type of Table to store and simulate data for causal inference in Julia.", + "uid": "github/ncbi/ngs", + "url": "https://github.com/ncbi/ngs", + "rel": "/software/repository/github/ncbi/ngs", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "NGS Language Bindings", "topics": [] }, { - "uid": "github/ucl-exoplanets/ExoTETHyS", - "url": "https://github.com/ucl-exoplanets/ExoTETHyS", - "rel": "/software/repository/github/ucl-exoplanets/ExoTETHyS", - "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", - "description": null, + "uid": "github/ncbi/SRPRISM", + "url": "https://github.com/ncbi/SRPRISM", + "rel": "/software/repository/github/ncbi/SRPRISM", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "Short Read Alignment Tool", "topics": [] }, { - "uid": "github/ucl-exoplanets/TauREx3_public", - "url": "https://github.com/ucl-exoplanets/TauREx3_public", - "rel": "/software/repository/github/ucl-exoplanets/TauREx3_public", - "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", - "description": "Public release of TauREx3", + "uid": "github/ncbi/BAMscale", + "url": "https://github.com/ncbi/BAMscale", + "rel": "/software/repository/github/ncbi/BAMscale", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "BAMscale is a one-step tool for either 1) quantifying and normalizing the coverage of peaks or 2) generated scaled BigWig files for easy visualization of commonly used DNA-seq capture based methods.", "topics": [] }, { - "uid": "github/ucl-exoplanets/ExoGAN_public", - "url": "https://github.com/ucl-exoplanets/ExoGAN_public", - "rel": "/software/repository/github/ucl-exoplanets/ExoGAN_public", - "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", - "description": null, + "uid": "github/ncbi/vadr", + "url": "https://github.com/ncbi/vadr", + "rel": "/software/repository/github/ncbi/vadr", + "avatar": "https://avatars.githubusercontent.com/u/3812119?v=4", + "description": "Viral Annotation DefineR: classification and annotation of viral sequences based on RefSeq annotation", "topics": [] }, { - "uid": "github/ucl-exoplanets/pylightcurve", - "url": "https://github.com/ucl-exoplanets/pylightcurve", - "rel": "/software/repository/github/ucl-exoplanets/pylightcurve", - "avatar": "https://avatars.githubusercontent.com/u/8776926?v=4", - "description": "A python package for modeling and analysing transit light-curves.", + "uid": "github/auckland-cosmo/interp-mc", + "url": "https://github.com/auckland-cosmo/interp-mc", + "rel": "/software/repository/github/auckland-cosmo/interp-mc", + "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", + "description": "Archival patch to CosmoMC for \"interp-mc\" paper", "topics": [] }, { - "uid": "github/czbiohub-sf/Rapid-QC-MS", - "url": "https://github.com/czbiohub-sf/Rapid-QC-MS", - "rel": "/software/repository/github/czbiohub-sf/Rapid-QC-MS", - "avatar": "https://avatars.githubusercontent.com/u/28747162?v=4", - "description": "Realtime quality control for mass spectrometry data acquisition", - "topics": [ - "mass-spectrometry", - "plotly-dash", - "metabolomics" - ] + "uid": "github/auckland-cosmo/defrost-mpi", + "url": "https://github.com/auckland-cosmo/defrost-mpi", + "rel": "/software/repository/github/auckland-cosmo/defrost-mpi", + "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", + "description": "MPI version of the defrost code ", + "topics": [] }, { - "uid": "github/SJ001/AI-Feynman", - "url": "https://github.com/SJ001/AI-Feynman", - "rel": "/software/repository/github/SJ001/AI-Feynman", - "avatar": "https://avatars.githubusercontent.com/u/10308578?v=4", - "description": null, + "uid": "github/auckland-cosmo/PyUltraLight", + "url": "https://github.com/auckland-cosmo/PyUltraLight", + "rel": "/software/repository/github/auckland-cosmo/PyUltraLight", + "avatar": "https://avatars.githubusercontent.com/u/40482857?v=4", + "description": "Pseudo-spectral Python code to compute ultralight dark matter dynamics. ", "topics": [] }, { - "uid": "github/mpievolbio-scicomp/cancer_sim", - "url": "https://github.com/mpievolbio-scicomp/cancer_sim", - "rel": "/software/repository/github/mpievolbio-scicomp/cancer_sim", - "avatar": "https://avatars1.githubusercontent.com/u/48993535?v=4", - "description": "CancerSim: A python3 package for stochastic cancer simulation in 2D.", + "uid": "github/research-software-directory/research-software-directory", + "url": "https://github.com/research-software-directory/research-software-directory", + "rel": "/software/repository/github/research-software-directory/research-software-directory", + "avatar": "https://avatars1.githubusercontent.com/u/35487281?v=4", + "description": "The Research Software Directory is a content management system that is tailored to software.", "topics": [ - "cancer", - "stochastic", - "tumours", - "mutation-profiles", - "division", - "simulation", - "sampling" + "fair-for-software", + "reproducible-research", + "research-software-engineering", + "discoverability" ] }, { - "uid": "github/sandialabs/pvOps", - "url": "https://github.com/sandialabs/pvOps", - "rel": "/software/repository/github/sandialabs/pvOps", - "avatar": "https://avatars.githubusercontent.com/u/4993680?v=4", - "description": "A set of documented functions for supporting operations research of photovoltaic energy systems. ", + "uid": "github/nutjunkie/IQmol", + "url": "https://github.com/nutjunkie/IQmol", + "rel": "/software/repository/github/nutjunkie/IQmol", + "avatar": "https://avatars.githubusercontent.com/u/2628598?v=4", + "description": "IQmol is an open source molecular editor and visualization package", "topics": [] }, { - "uid": "github/linneas/condetri", - "url": "https://github.com/linneas/condetri", - "rel": "/software/repository/github/linneas/condetri", - "avatar": "https://avatars.githubusercontent.com/u/11454758?v=4", - "description": "Automatically exported from code.google.com/p/condetri", - "topics": [] + "uid": "github/weecology/retriever", + "url": "https://github.com/weecology/retriever", + "rel": "/software/repository/github/weecology/retriever", + "avatar": "https://avatars3.githubusercontent.com/u/1156696?v=4", + "description": "Quickly download, clean up, and install public datasets into a database management system", + "topics": [ + "data-retrieval", + "dataset", + "python", + "data", + "data-science", + "datasets" + ] }, { - "uid": "github/camfort/fortran-src", - "url": "https://github.com/camfort/fortran-src", - "rel": "/software/repository/github/camfort/fortran-src", - "avatar": "https://avatars.githubusercontent.com/u/18264580?v=4", - "description": "Fortran parsing and static analysis infrastructure", + "uid": "github/alstat/ALUES", + "url": "https://github.com/alstat/ALUES", + "rel": "/software/repository/github/alstat/ALUES", + "avatar": "https://avatars.githubusercontent.com/u/1414007?v=4", + "description": "Agricultural Land Use Evaluation System", "topics": [ - "automated-refactoring", - "fortran", - "haskell", - "parser", - "static-analysis" + "r", + "r-package", + "agriculture", + "agricultural-modelling" ] }, { - "uid": "github/linqs/psl", - "url": "https://github.com/linqs/psl", - "rel": "/software/repository/github/linqs/psl", - "avatar": "https://avatars1.githubusercontent.com/u/918327?v=4", - "description": "The PSL software from the University of Maryland and the University of California Santa Cruz", + "uid": "github/yuguangchen1/KcwiKit", + "url": "https://github.com/yuguangchen1/KcwiKit", + "rel": "/software/repository/github/yuguangchen1/KcwiKit", + "avatar": "https://avatars.githubusercontent.com/u/26374962?v=4", + "description": "Improving KCWI/KDERP pipeline.", "topics": [] }, { - "uid": "github/GalletFlorian/TATOO", - "url": "https://github.com/GalletFlorian/TATOO", - "rel": "/software/repository/github/GalletFlorian/TATOO", - "avatar": "https://avatars.githubusercontent.com/u/53513832?v=4", - "description": "Tidal-chronology Age TOOl", + "uid": "github/occupationMeasurement/occupationMeasurement", + "url": "https://github.com/occupationMeasurement/occupationMeasurement", + "rel": "/software/repository/github/occupationMeasurement/occupationMeasurement", + "avatar": "https://avatars.githubusercontent.com/u/113119771?v=4", + "description": "A package to help with the (interactive) coding and measurement of occupations", "topics": [] }, { - "uid": "github/CornellLabofOrnithology/auk", - "url": "https://github.com/CornellLabofOrnithology/auk", - "rel": "/software/repository/github/CornellLabofOrnithology/auk", - "avatar": "https://avatars.githubusercontent.com/u/1395442?v=4", - "description": "Working with eBird data in R", - "topics": [ - "r", - "ebird", - "dataset", - "dataset", - "ebird", - "data-access" - ] + "uid": "github/PhilippJunk/homelette", + "url": "https://github.com/PhilippJunk/homelette", + "rel": "/software/repository/github/PhilippJunk/homelette", + "avatar": "https://avatars.githubusercontent.com/u/69007269?v=4", + "description": "A unified and modular interface to homology modelling software", + "topics": [] }, { - "uid": "github/taehoryu/TDEmass", - "url": "https://github.com/taehoryu/TDEmass", - "rel": "/software/repository/github/taehoryu/TDEmass", - "avatar": "https://avatars.githubusercontent.com/u/30508125?v=4", - "description": null, + "uid": "github/PfizerRD/sit2standpy", + "url": "https://github.com/PfizerRD/sit2standpy", + "rel": "/software/repository/github/PfizerRD/sit2standpy", + "avatar": "https://avatars1.githubusercontent.com/u/19213564?v=4", + "description": "Python based module framework for detecting sit-to-stand transitions", "topics": [] }, { - "uid": "github/TeamNCMC/cuisto", - "url": "https://github.com/TeamNCMC/cuisto", - "rel": "/software/repository/github/TeamNCMC/cuisto", - "avatar": "https://avatars.githubusercontent.com/u/186301548?v=4", - "description": "Quantify histological data", - "topics": [] + "uid": "github/hyriver/hysetter", + "url": "https://github.com/hyriver/hysetter", + "rel": "/software/repository/github/hyriver/hysetter", + "avatar": "https://avatars.githubusercontent.com/u/109259800?v=4", + "description": "A command-line tool for getting hydroclimate data within CONUS using HyRiver", + "topics": [ + "climate-data", + "daymet", + "gridmet", + "hydrology", + "nldas", + "nwis" + ] }, { - "uid": "github/MarcNeveu/IcyDwarf", - "url": "https://github.com/MarcNeveu/IcyDwarf", - "rel": "/software/repository/github/MarcNeveu/IcyDwarf", - "avatar": "https://avatars.githubusercontent.com/u/3951494?v=4", - "description": "Coupled geophysical-geochemical-orbital evolution model of icy worlds.", + "uid": "github/CM2S/piglot", + "url": "https://github.com/CM2S/piglot", + "rel": "/software/repository/github/CM2S/piglot", + "avatar": "https://avatars.githubusercontent.com/u/25201360?v=4", + "description": "A package for the optimisation of numerical responses", + "topics": [ + "python", + "parameter-identification", + "optimisation", + "bayesian-optimization", + "physics-solvers" + ] + }, + { + "uid": "github/lucatelli/morphen", + "url": "https://github.com/lucatelli/morphen", + "rel": "/software/repository/github/lucatelli/morphen", + "avatar": "https://avatars.githubusercontent.com/u/11822348?v=4", + "description": "Collection of functions for astronomical image analysis and processing. These tools involves pure python, but also are integrated with CASA (https://casa.nrao.edu/)", "topics": [] }, { - "uid": "github/tloredo/CUDAHM", - "url": "https://github.com/tloredo/CUDAHM", - "rel": "/software/repository/github/tloredo/CUDAHM", - "avatar": "https://avatars.githubusercontent.com/u/186722?v=4", - "description": "Routines for using CUDA to perform MCMC Sampling of Hierarchical Models with GPUs.", + "uid": "github/bioturing/hera", + "url": "https://github.com/bioturing/hera", + "rel": "/software/repository/github/bioturing/hera", + "avatar": "https://avatars.githubusercontent.com/u/30481444?v=4", + "description": "a bioinformatics tool that helps analyze RNA-seq data, providing base-to-base alignment BAM files, transcript abundance estimation, and fusion gene detection.", "topics": [] }, { - "uid": "github/matthiasfabry/spinOS", - "url": "https://github.com/matthiasfabry/spinOS", - "rel": "/software/repository/github/matthiasfabry/spinOS", - "avatar": "https://avatars.githubusercontent.com/u/17302115?v=4", - "description": "SPectroscopic and Interferometric Orbital Solution finder", + "uid": "github/davideamato/NAPLES", + "url": "https://github.com/davideamato/NAPLES", + "rel": "/software/repository/github/davideamato/NAPLES", + "avatar": "https://avatars.githubusercontent.com/u/50680451?v=4", + "description": "NAPLES (Numerical Analysis of PLanetary EncounterS) is a Fortran code for the numerical analysis of close encounters in the Circular, Restricted Three-Body Problem using regularized formulations.", "topics": [] }, { - "uid": "github/j-faria/kima", - "url": "https://github.com/j-faria/kima", - "rel": "/software/repository/github/j-faria/kima", - "avatar": "https://avatars.githubusercontent.com/u/1958991?v=4", - "description": "Exoplanet detection in RVs with DNest4 and GPs", + "uid": "github/thomas0809/MolScribe", + "url": "https://github.com/thomas0809/MolScribe", + "rel": "/software/repository/github/thomas0809/MolScribe", + "avatar": "https://avatars.githubusercontent.com/u/11373553?v=4", + "description": "Robust Molecular Structure Recognition with Image-to-Graph Generation", "topics": [ - "exoplanets", - "radial-velocity", - "bayesian", - "gaussian-processes", - "hacktoberfest" + "chemistry", + "deep-learning", + "molecule" ] }, { - "uid": "github/ProSolo/prosolo", - "url": "https://github.com/ProSolo/prosolo", - "rel": "/software/repository/github/ProSolo/prosolo", - "avatar": "https://avatars.githubusercontent.com/u/40427071?v=4", - "description": "ProSolo, variant calling from single cell DNA-seq data, or: bulk backing vocals for single cell solos.", + "uid": "github/matthiasdemuzere/w2w", + "url": "https://github.com/matthiasdemuzere/w2w", + "rel": "/software/repository/github/matthiasdemuzere/w2w", + "avatar": "https://avatars.githubusercontent.com/u/6926916?v=4", + "description": "A python tool that ingests WUDAPT information into WRF.", "topics": [] }, { - "uid": "github/smirik/resonances", - "url": "https://github.com/smirik/resonances", - "rel": "/software/repository/github/smirik/resonances", - "avatar": "https://avatars.githubusercontent.com/u/354907?v=4", - "description": "A python package for identification of mean-motion resonances in the Solar system and other planetary systems.", + "uid": "github/sstadick/perbase", + "url": "https://github.com/sstadick/perbase", + "rel": "/software/repository/github/sstadick/perbase", + "avatar": "https://avatars.githubusercontent.com/u/6712477?v=4", + "description": "Per-base per-nucleotide depth analysis", "topics": [ - "astronomy", - "mean-motion-resonance", - "solar-system-simulation" + "rust", + "bioinformatics", + "cli-app" ] }, { - "uid": "github/mkenworthy/exorings", - "url": "https://github.com/mkenworthy/exorings", - "rel": "/software/repository/github/mkenworthy/exorings", - "avatar": "https://avatars.githubusercontent.com/u/1846189?v=4", - "description": "Tools for fitting and displaying giant extrasolar planet ring systems.", + "uid": "github/sstadick/crabz", + "url": "https://github.com/sstadick/crabz", + "rel": "/software/repository/github/sstadick/crabz", + "avatar": "https://avatars.githubusercontent.com/u/6712477?v=4", + "description": "Like pigz, but rust", "topics": [] }, { - "uid": "github/MolecularAI/DockStreamCommunity", - "url": "https://github.com/MolecularAI/DockStreamCommunity", - "rel": "/software/repository/github/MolecularAI/DockStreamCommunity", - "avatar": "https://avatars.githubusercontent.com/u/62212926?v=4", - "description": null, - "topics": [ - "reinforcement-learning", - "chemoinformatics", - "jupyter-notebook", - "denovo-design", - "astrazeneca", - "molecular-docking" - ] + "uid": "github/fxwiegand/predictosaurus", + "url": "https://github.com/fxwiegand/predictosaurus", + "rel": "/software/repository/github/fxwiegand/predictosaurus", + "avatar": "https://avatars.githubusercontent.com/u/39430842?v=4", + "description": "Uncertainty aware haplotype based genomic variant effect prediction", + "topics": [] }, { - "uid": "github/molgenis/graph2vr", - "url": "https://github.com/molgenis/Graph2VR", - "rel": "/software/repository/github/molgenis/graph2vr", - "avatar": "https://avatars.githubusercontent.com/u/1688158?v=4", - "description": "Visualising / Exploring Linked Data (SPARQL Construct queries) in Virtual Reality.", + "uid": "github/RainthunderWYL/LoRD", + "url": "https://github.com/RainthunderWYL/LoRD", + "rel": "/software/repository/github/RainthunderWYL/LoRD", + "avatar": "https://avatars.githubusercontent.com/u/30300990?v=4", + "description": "Locate Reconnection Distribution", + "topics": [] + }, + { + "uid": "github/David-McKenna/udpPacketManager", + "url": "https://github.com/David-McKenna/udpPacketManager", + "rel": "/software/repository/github/David-McKenna/udpPacketManager", + "avatar": "https://avatars.githubusercontent.com/u/43447097?v=4", + "description": "C Library for handling CEP packet data from an international LOFAR station", + "topics": [] + }, + { + "uid": "github/NctuICLab/PredCRP", + "url": "https://github.com/NctuICLab/PredCRP", + "rel": "/software/repository/github/NctuICLab/PredCRP", + "avatar": "https://avatars.githubusercontent.com/u/25690048?v=4", + "description": "Predicting the regulatory role of CRP transcription factor in Escherichia coli ", "topics": [ - "graph-visualization", - "phd-project", - "prototype", - "querying", - "sparql", - "virtual-reality" + "crp", + "escherichia-coli", + "libsvm", + "feature-selection", + "predcrp", + "transcription-factor" ] }, { - "uid": "github/molgenis/vibe-suppl", - "url": "https://github.com/molgenis/vibe-suppl", - "rel": "/software/repository/github/molgenis/vibe-suppl", - "avatar": "https://avatars.githubusercontent.com/u/1688158?v=4", - "description": "Variant Interpretation using Biological Evidence - supplemental files", + "uid": "github/QuantEcon/QuantEcon.py", + "url": "https://github.com/QuantEcon/QuantEcon.py", + "rel": "/software/repository/github/QuantEcon/QuantEcon.py", + "avatar": "https://avatars1.githubusercontent.com/u/8703060?v=4", + "description": "A community based Python library for quantitative economics", "topics": [] }, { - "uid": "github/ArgonneCPAC/diffstar", - "url": "https://github.com/ArgonneCPAC/diffstar", - "rel": "/software/repository/github/ArgonneCPAC/diffstar", - "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", - "description": "Differentiable star formation histories", + "uid": "github/kim8517/RVSNUpy", + "url": "https://github.com/kim8517/RVSNUpy", + "rel": "/software/repository/github/kim8517/RVSNUpy", + "avatar": "https://avatars.githubusercontent.com/u/96759588?v=4", + "description": null, "topics": [] }, { - "uid": "github/ArgonneCPAC/dsps", - "url": "https://github.com/ArgonneCPAC/dsps", - "rel": "/software/repository/github/ArgonneCPAC/dsps", - "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", - "description": "Differentiable Stellar Population Synthesis", - "topics": [] + "uid": "github/sevenstarknight/VariableStarAnalysis", + "url": "https://github.com/sevenstarknight/VariableStarAnalysis", + "rel": "/software/repository/github/sevenstarknight/VariableStarAnalysis", + "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", + "description": null, + "topics": [ + "machine-learning", + "astrophysics", + "photometric", + "analysis", + "time-series-analysis", + "metric-learning" + ] }, { - "uid": "github/ArgonneCPAC/diffmah", - "url": "https://github.com/ArgonneCPAC/diffmah", - "rel": "/software/repository/github/ArgonneCPAC/diffmah", - "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", - "description": "Differentiable models of halo and galaxy formation history", - "topics": [] + "uid": "github/sevenstarknight/SSMM", + "url": "https://github.com/sevenstarknight/SSMM", + "rel": "/software/repository/github/sevenstarknight/SSMM", + "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", + "description": "Variable Star Signature Classification using Slotted Symbolic Markov Modeling", + "topics": [ + "machine-learning", + "astronomy", + "astroinformatics", + "astrostatistics" + ] }, { - "uid": "github/Leo-Simpson/c-lasso", - "url": "https://github.com/Leo-Simpson/c-lasso", - "rel": "/software/repository/github/Leo-Simpson/c-lasso", - "avatar": "https://avatars.githubusercontent.com/u/52931376?v=4", - "description": "c-lasso: a Python package for constrained sparse regression and classification", - "topics": [] + "uid": "github/sevenstarknight/OCDetector", + "url": "https://github.com/sevenstarknight/OCDetector", + "rel": "/software/repository/github/sevenstarknight/OCDetector", + "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", + "description": "O'Connell Effect Detector using Push-Pull Learning", + "topics": [ + "machine", + "astronomy", + "astrostatistics", + "astroinformatics" + ] }, { - "uid": "github/nialov/fractopo", - "url": "https://github.com/nialov/fractopo", - "rel": "/software/repository/github/nialov/fractopo", - "avatar": "https://avatars.githubusercontent.com/u/47318483?v=4", - "description": "fractopo is a Python package with tools for validating and analyzing lineament and fracture trace maps", + "uid": "github/sevenstarknight/LINEARSupervisedClassification", + "url": "https://github.com/sevenstarknight/LINEARSupervisedClassification", + "rel": "/software/repository/github/sevenstarknight/LINEARSupervisedClassification", + "avatar": "https://avatars.githubusercontent.com/u/8449059?v=4", + "description": "The initial analysis of LINEAR data using supervised classification methods.", "topics": [ - "analysis", - "fracture", - "geology", - "topology", - "geometry", - "spatial-analysis", - "fractopo", - "python" + "supervised-classification-methods", + "machine", + "machine-learning", + "astroinformatics", + "astrostatistics" ] }, { - "uid": "github/icesat2py/icepyx", - "url": "https://github.com/icesat2py/icepyx", - "rel": "/software/repository/github/icesat2py/icepyx", - "avatar": "https://avatars.githubusercontent.com/u/57814535?v=4", - "description": "Python tools for obtaining and working with ICESat-2 data", + "uid": "github/davidemms/OrthoFinder", + "url": "https://github.com/davidemms/OrthoFinder", + "rel": "/software/repository/github/davidemms/OrthoFinder", + "avatar": "https://avatars.githubusercontent.com/u/13098041?v=4", + "description": "Phylogenetic orthology inference for comparative genomics", "topics": [ - "icesat-2", - "community-driven", - "python3", - "hacktoberfest", - "closember" + "gene-trees", + "orthogroup", + "orthologs", + "gene-duplication" ] }, { - "uid": "github/IMB-Computational-Genomics-Lab/scGPS", - "url": "https://github.com/IMB-Computational-Genomics-Lab/scGPS", - "rel": "/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", - "avatar": "https://avatars.githubusercontent.com/u/16315638?v=4", - "description": "A framework for clustering (CORE) and estimation of relationship between pairs of clusters (scGPS) from single cell data ", + "uid": "github/lyf222/alpconv", + "url": "https://github.com/lyf222/alpconv", + "rel": "/software/repository/github/lyf222/alpconv", + "avatar": "https://avatars.githubusercontent.com/u/84237604?v=4", + "description": "calculating alp-photon conversion", "topics": [] }, { - "uid": "github/surhh/nfitsview", - "url": "https://github.com/surhh/nfitsview", - "rel": "/software/repository/github/surhh/nfitsview", - "avatar": "https://avatars.githubusercontent.com/u/109148999?v=4", - "description": "nFITSview - A simple and user-friendly FITS image viewer", + "uid": "github/jpierel14/snsed", + "url": "https://github.com/jpierel14/snsed", + "rel": "/software/repository/github/jpierel14/snsed", + "avatar": "https://avatars.githubusercontent.com/u/22748184?v=4", + "description": null, "topics": [] }, { - "uid": "github/chianti-atomic/ChiantiPy", - "url": "https://github.com/chianti-atomic/ChiantiPy", - "rel": "/software/repository/github/chianti-atomic/ChiantiPy", - "avatar": "https://avatars.githubusercontent.com/u/8628468?v=4", - "description": "ChiantiPy is a python package to calculate the radiative properties of astrophysical plasmas based on the CHIANTI atomic database", + "uid": "github/jpierel14/sntd", + "url": "https://github.com/jpierel14/sntd", + "rel": "/software/repository/github/jpierel14/sntd", + "avatar": "https://avatars.githubusercontent.com/u/22748184?v=4", + "description": "SNTD is a Python package dedicated to measuring time delays for strongly lensed and multiply-imaged SN. The package can simulate lensed SN, fit for each SN time delay, and propagate the results all the way through to cosmological constraints.", "topics": [ - "python", - "chianti-atomic-database", - "chianti", - "spectroscopy", - "astrophysics" + "cosmology", + "gravitational-lensing", + "supernova" ] }, { - "uid": "github/mariakotouza/TRIP-Tool", - "url": "https://github.com/mariakotouza/TRIP-Tool", - "rel": "/software/repository/github/mariakotouza/TRIP-Tool", - "avatar": "https://avatars0.githubusercontent.com/u/22618154?v=4", - "description": "Antigen receptor gene profiler: A software framework that provides analytics services on NGS Data", - "topics": [] + "uid": "github/atomneb/AtomNeb-py", + "url": "https://github.com/atomneb/AtomNeb-py", + "rel": "/software/repository/github/atomneb/AtomNeb-py", + "avatar": "https://avatars2.githubusercontent.com/u/23319970?v=4", + "description": "AtomNeb - Python Package for Atomic Data of Ionized Nebulae", + "topics": [ + "atomneb", + "chianti-atomic-database", + "atomic-datasets", + "recombination-lines", + "collisionally-excited-lines", + "recombination-coefficients" + ] }, { - "uid": "github/imperialchem/mrd-demo", - "url": "https://github.com/imperialchem/mrd-demo", - "rel": "/software/repository/github/imperialchem/mrd-demo", - "avatar": "https://avatars.githubusercontent.com/u/9826134?v=4", - "description": "Demonstration of classical molecular reaction dynamics for a tri-atomic system", + "uid": "github/FredHutch/SEACR", + "url": "https://github.com/FredHutch/SEACR", + "rel": "/software/repository/github/FredHutch/SEACR", + "avatar": "https://avatars.githubusercontent.com/u/1427766?v=4", + "description": "SEACR: Sparse Enrichment Analysis for CUT&RUN", "topics": [] }, { - "uid": "github/SamDuffield/bmm", - "url": "https://github.com/SamDuffield/bmm", - "rel": "/software/repository/github/SamDuffield/bmm", - "avatar": "https://avatars.githubusercontent.com/u/34280297?v=4", - "description": "Map-matching using particle smoothing methods.", + "uid": "github/aconley/simple_cosfitter", + "url": "https://github.com/aconley/simple_cosfitter", + "rel": "/software/repository/github/aconley/simple_cosfitter", + "avatar": "https://avatars.githubusercontent.com/u/2012806?v=4", + "description": "Grid based SN cosmology fitting code", "topics": [] }, { - "uid": "github/timkartar/RNAscape", - "url": "https://github.com/timkartar/RNAscape", - "rel": "/software/repository/github/timkartar/RNAscape", - "avatar": "https://avatars.githubusercontent.com/u/16060117?v=4", - "description": "Geometry faithful 2D RNA visualization", - "topics": [ - "dna", - "geometry", - "nucleic-acids", - "rna", - "structural-biology", - "visualization", - "webserver" - ] + "uid": "github/aconley/mbb_emcee", + "url": "https://github.com/aconley/mbb_emcee", + "rel": "/software/repository/github/aconley/mbb_emcee", + "avatar": "https://avatars.githubusercontent.com/u/2012806?v=4", + "description": "Modified blackbody MCMC code", + "topics": [] }, { - "uid": "github/SGpp/DisCoTec", - "url": "https://github.com/SGpp/DisCoTec", - "rel": "/software/repository/github/SGpp/DisCoTec", - "avatar": "https://avatars.githubusercontent.com/u/37072529?v=4", - "description": "MPI-based code for distributed HPC simulations with the sparse grid combination technique. Docs->(https://discotec.readthedocs.io/)", + "uid": "github/mzy2240/ESA", + "url": "https://github.com/mzy2240/ESA", + "rel": "/software/repository/github/mzy2240/ESA", + "avatar": "https://avatars0.githubusercontent.com/u/18620336?v=4", + "description": "Easy SimAuto (ESA): An easy-to-use Python connector to PowerWorld Simulator Automation Server (SimAuto)", "topics": [ - "higher-dimensional", - "multi-scale", - "simulation", - "sparse-grids", - "vlasov-solver", - "combination-technique" + "python", + "powerworld", + "simulator", + "simauto", + "automation", + "powerworld-simulator", + "esa", + "simulator-automation-server", + "smart-grid", + "numpy", + "pandas" ] }, { - "uid": "github/abhisrkckl/Vela.jl", - "url": "https://github.com/abhisrkckl/Vela.jl", - "rel": "/software/repository/github/abhisrkckl/Vela.jl", - "avatar": "https://avatars.githubusercontent.com/u/20718391?v=4", - "description": "A Bayesian pulsar timing and noise analysis package.", + "uid": "github/Martin-Fahrenberger/GTestimate", + "url": "https://github.com/Martin-Fahrenberger/GTestimate", + "rel": "/software/repository/github/Martin-Fahrenberger/GTestimate", + "avatar": "https://avatars.githubusercontent.com/u/20248502?v=4", + "description": "scRNA-seq normalization method, based on the Simple Good-Turing estimator", "topics": [ - "astronomy-astrophysics", - "data-analysis", - "pulsars" + "good-turing", + "scrna-seq" ] }, { - "uid": "github/abhisrkckl/GWecc", - "url": "https://github.com/abhisrkckl/GWecc", - "rel": "/software/repository/github/abhisrkckl/GWecc", - "avatar": "https://avatars.githubusercontent.com/u/20718391?v=4", - "description": "GWecc is a C++ code that computes the pulsar timing array (PTA) signals induced by eccentric supermassive binaries.", + "uid": "github/cdanielmachado/carveme", + "url": "https://github.com/cdanielmachado/carveme", + "rel": "/software/repository/github/cdanielmachado/carveme", + "avatar": "https://avatars.githubusercontent.com/u/2588245?v=4", + "description": "CarveMe: genome-scale metabolic model reconstruction", "topics": [ - "gravitational-waves", - "pulsars", - "binary-stars", - "astrophysics" + "metabolism", + "modeling", + "python", + "reconstruction", + "genome-scale" ] }, { - "uid": "github/projectcuisines/thai_trilogy_code", - "url": "https://github.com/projectcuisines/thai_trilogy_code", - "rel": "/software/repository/github/projectcuisines/thai_trilogy_code", - "avatar": "https://avatars.githubusercontent.com/u/68251081?v=4", - "description": "Python code to postprocess, analyse, and visualise THAI models output ", + "uid": "github/cdanielmachado/reframed", + "url": "https://github.com/cdanielmachado/reframed", + "rel": "/software/repository/github/cdanielmachado/reframed", + "avatar": "https://avatars.githubusercontent.com/u/2588245?v=4", + "description": "ReFramed: metabolic modeling package", "topics": [ - "atmospheric-modelling", - "exoplanets", - "gcm", - "trappist-1" + "metabolism", + "modeling", + "python" ] }, { - "uid": "github/saeyslab/CytoNorm_Figures", - "url": "https://github.com/saeyslab/CytoNorm_Figures", - "rel": "/software/repository/github/saeyslab/CytoNorm_Figures", - "avatar": "https://avatars0.githubusercontent.com/u/18485264?v=4", - "description": "Scripts to replicate the figures reported in the CytofNorm publication. ", + "uid": "github/cosmoinin/MGPT", + "url": "https://github.com/cosmoinin/MGPT", + "rel": "/software/repository/github/cosmoinin/MGPT", + "avatar": "https://avatars.githubusercontent.com/u/42773394?v=4", + "description": "Modified gravity perturbation theory code", "topics": [] }, { - "uid": "github/saeyslab/nichenetr", - "url": "https://github.com/saeyslab/nichenetr", - "rel": "/software/repository/github/saeyslab/nichenetr", - "avatar": "https://avatars0.githubusercontent.com/u/18485264?v=4", - "description": "NicheNet: predict active ligand-target links between interacting cells", - "topics": [] + "uid": "github/otvam/pypeec", + "url": "https://github.com/otvam/pypeec", + "rel": "/software/repository/github/otvam/pypeec", + "avatar": "https://avatars.githubusercontent.com/u/24779927?v=4", + "description": "PyPEEC - 3D Quasi-Magnetostatic FFT/PEEC Solver", + "topics": [ + "3d", + "fft", + "magnetic", + "peec", + "voxel", + "pypeec", + "frequency-domain", + "conductor", + "electric", + "maxwell-equations", + "power-electronics", + "field-simulation" + ] }, { - "uid": "github/saeyslab/PeacoQC", - "url": "https://github.com/saeyslab/PeacoQC", - "rel": "/software/repository/github/saeyslab/PeacoQC", - "avatar": "https://avatars.githubusercontent.com/u/18485264?v=4", - "description": "Peak-based selection of high quality cytometry data", + "uid": "github/laristra/flecsph", + "url": "https://github.com/laristra/flecsph", + "rel": "/software/repository/github/laristra/flecsph", + "avatar": "https://avatars.githubusercontent.com/u/24596390?v=4", + "description": "A Parallel and Distributed SPH Implementation Based on the FleCSI", "topics": [] }, { - "uid": "github/christopher-vollmers/C3POa", - "url": "https://github.com/christopher-vollmers/C3POa", - "rel": "/software/repository/github/christopher-vollmers/C3POa", - "avatar": "https://avatars.githubusercontent.com/u/28308271?v=4", - "description": "(Concatemeric Consensus Caller with Partial Order alignments) is a computational pipeline for calling consensi on R2C2 nanopore data.", + "uid": "github/comp-phys-marc/qasm-ts", + "url": "https://github.com/comp-phys-marc/qasm-ts", + "rel": "/software/repository/github/comp-phys-marc/qasm-ts", + "avatar": "https://avatars.githubusercontent.com/u/94946848?v=4", + "description": "QASM, the low-level programming language for quantum circuit specification, implemented in TypeScript.", "topics": [] }, { - "uid": "github/inigozubeldia/cosmocnc", - "url": "https://github.com/inigozubeldia/cosmocnc", - "rel": "/software/repository/github/inigozubeldia/cosmocnc", - "avatar": "https://avatars.githubusercontent.com/u/49374875?v=4", - "description": null, - "topics": [] + "uid": "github/prioritizr/wdpar", + "url": "https://github.com/prioritizr/wdpar", + "rel": "/software/repository/github/prioritizr/wdpar", + "avatar": "https://avatars.githubusercontent.com/u/25472841?v=4", + "description": "Interface to the World Database on Protected Areas", + "topics": [ + "r", + "conservation", + "data", + "spatial", + "database", + "biodiversity", + "protected-areas", + "cran", + "r-package", + "rstats" + ] }, { - "uid": "github/inigozubeldia/szifi", - "url": "https://github.com/inigozubeldia/szifi", - "rel": "/software/repository/github/inigozubeldia/szifi", - "avatar": "https://avatars.githubusercontent.com/u/49374875?v=4", - "description": null, - "topics": [] + "uid": "github/BiomedSciAI/fuse-med-ml", + "url": "https://github.com/BiomedSciAI/fuse-med-ml", + "rel": "/software/repository/github/BiomedSciAI/fuse-med-ml", + "avatar": "https://avatars.githubusercontent.com/u/108874137?v=4", + "description": "A python framework accelerating ML based discovery in the medical field by encouraging code reuse. Batteries included :)", + "topics": [ + "deep-learning", + "machine-learning", + "pytorch", + "collaboration", + "fuse-med-ml", + "fusemedml", + "fuse", + "medical", + "medical-imaging", + "healthcare", + "vision", + "multimodality", + "ai", + "python", + "cmmd", + "isic", + "ct", + "stoic", + "knight-challenge", + "hacktoberfest" + ] }, { - "uid": "github/dokester/BayesicFitting", - "url": "https://github.com/dokester/BayesicFitting", - "rel": "/software/repository/github/dokester/BayesicFitting", - "avatar": "https://avatars.githubusercontent.com/u/10372360?v=4", - "description": "Bayesian fitting package", + "uid": "github/craddis1/CosmoWAP", + "url": "https://github.com/craddis1/CosmoWAP", + "rel": "/software/repository/github/craddis1/CosmoWAP", + "avatar": "https://avatars.githubusercontent.com/u/67746749?v=4", + "description": "Python package to analyze the fourier power spectra and bispectra with wide-separation, relativistic and primordial non-gaussian effects in large-scale structure Cosmology.", "topics": [ - "fitters", - "data-analysis", - "modeling", - "bayesian", - "evidence", - "calibration-toolbox", - "jupyter-notebook", - "history", - "java", - "hope", - "nested-sampling", - "test-harness", - "pypi", - "exercise" + "python3", + "theory", + "bispectrum", + "peturbation-theory", + "powerspectrum", + "cosmology", + "forecasting", + "large-scale-structure-cosmology" ] }, { - "uid": "github/OpenQuantumComputing/quantumreservoirpy", - "url": "https://github.com/OpenQuantumComputing/quantumreservoirpy", - "rel": "/software/repository/github/OpenQuantumComputing/quantumreservoirpy", - "avatar": "https://avatars.githubusercontent.com/u/60732936?v=4", - "description": "Some initial code for simple QRC examples on discrete states", - "topics": [] + "uid": "github/craddis1/MathWAP", + "url": "https://github.com/craddis1/MathWAP", + "rel": "/software/repository/github/craddis1/MathWAP", + "avatar": "https://avatars.githubusercontent.com/u/67746749?v=4", + "description": "Mathematica routines to compute power spectra bispectra contributions from peturbation theory", + "topics": [ + "bispectrum", + "cosmology", + "peturbation-theory", + "powerspectrum" + ] }, { - "uid": "github/MetaboComp/TriplotGUI", - "url": "https://github.com/MetaboComp/TriplotGUI", - "rel": "/software/repository/github/MetaboComp/TriplotGUI", - "avatar": "https://avatars.githubusercontent.com/u/110531427?v=4", - "description": null, + "uid": "github/jakeown/astroclover", + "url": "https://github.com/jakeown/astroclover", + "rel": "/software/repository/github/jakeown/astroclover", + "avatar": "https://avatars.githubusercontent.com/u/16109704?v=4", + "description": "Convnet Line-fitting Of Velocities in Emission-line Regions (CLOVER)", "topics": [] }, { - "uid": "github/genome/somatic-sniper", - "url": "https://github.com/genome/somatic-sniper", - "rel": "/software/repository/github/genome/somatic-sniper", - "avatar": "https://avatars.githubusercontent.com/u/318108?v=4", - "description": "A tool to call somatic single nucleotide variants.", - "topics": [] + "uid": "github/Jammy2211/PyAutoLens", + "url": "https://github.com/Jammy2211/PyAutoLens", + "rel": "/software/repository/github/Jammy2211/PyAutoLens", + "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", + "description": "PyAutoLens: Open Source Strong Gravitational Lensing", + "topics": [ + "astronomy", + "gravitational-lensing", + "lens-modeling", + "cosmology", + "galaxy", + "gravitational-lenses", + "astrophysics", + "physics", + "image-processing", + "image", + "python" + ] }, { - "uid": "github/genome/bam-readcount", - "url": "https://github.com/genome/bam-readcount", - "rel": "/software/repository/github/genome/bam-readcount", - "avatar": "https://avatars.githubusercontent.com/u/318108?v=4", - "description": "Count bases in BAM/CRAM files", + "uid": "github/Jammy2211/PyAutoGalaxy", + "url": "https://github.com/Jammy2211/PyAutoGalaxy", + "rel": "/software/repository/github/Jammy2211/PyAutoGalaxy", + "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", + "description": "PyAutoGalaxy: Open-Source Multiwavelength Galaxy Structure & Morphology", "topics": [] }, { - "uid": "github/matthewholman/assist", - "url": "https://github.com/matthewholman/assist", - "rel": "/software/repository/github/matthewholman/assist", - "avatar": "https://avatars.githubusercontent.com/u/3812057?v=4", - "description": "ASSIST is a software package for ephemeris-quality integrations of test particles.", - "topics": [ - "astrophysics", - "integrator", - "n-body", - "planetary-science" - ] + "uid": "github/Jammy2211/PyAutoCTI", + "url": "https://github.com/Jammy2211/PyAutoCTI", + "rel": "/software/repository/github/Jammy2211/PyAutoCTI", + "avatar": "https://avatars.githubusercontent.com/u/23455639?v=4", + "description": "PyAutoCTI: Charge Transfer Inefficiency Calibration", + "topics": [] }, { - "uid": "github/spiketools/spiketools", - "url": "https://github.com/spiketools/spiketools", - "rel": "/software/repository/github/spiketools/spiketools", - "avatar": "https://avatars.githubusercontent.com/u/91502149?v=4", - "description": "Tools for analyzing spiking data.", - "topics": [ - "neuroscience", - "spikes", - "single-unit", - "spike-analysis", - "python", - "data-analysis" - ] + "uid": "github/jradcliffe5/multi_self_cal", + "url": "https://github.com/jradcliffe5/multi_self_cal", + "rel": "/software/repository/github/jradcliffe5/multi_self_cal", + "avatar": "https://avatars.githubusercontent.com/u/11754064?v=4", + "description": "Multi-Source Self-Calibration is a Parseltongue (Kettenis et al. 2012) script which provides an extra calibration for VLBI data sets that image multiple target source within one observation. More information is in the README & paper Radcliffe et. al 2016. If you use this script please reference Radcliffe et al. 2016 which is the paper that accompanies this release.", + "topics": [] }, { - "uid": "github/christinahedges/contaminante", - "url": "https://github.com/christinahedges/contaminante", - "rel": "/software/repository/github/christinahedges/contaminante", - "avatar": "https://avatars.githubusercontent.com/u/14965634?v=4", - "description": "Find the contaminant transiting source in Kepler, K2 or TESS data.", + "uid": "github/junkoda/cola_halo", + "url": "https://github.com/junkoda/cola_halo", + "rel": "/software/repository/github/junkoda/cola_halo", + "avatar": "https://avatars.githubusercontent.com/u/5052171?v=4", + "description": "Parallel COLA cosmological simulation + 2LPT initial condition generator + FoF halo finder", "topics": [] }, { - "uid": "github/christinahedges/TESS-SIP", - "url": "https://github.com/christinahedges/TESS-SIP", - "rel": "/software/repository/github/christinahedges/TESS-SIP", - "avatar": "https://avatars.githubusercontent.com/u/14965634?v=4", - "description": "Long term rotation period finding tool for NASA's TESS mission", + "uid": "github/junkoda/sidm-nbody", + "url": "https://github.com/junkoda/sidm-nbody", + "rel": "/software/repository/github/junkoda/sidm-nbody", + "avatar": "https://avatars.githubusercontent.com/u/5052171?v=4", + "description": "Monte Carlo N-body Simulation for Self-Interacting Dark Matter", "topics": [] }, { - "uid": "github/msailer1234/JWST_Simulation", - "url": "https://github.com/msailer1234/JWST_Simulation", - "rel": "/software/repository/github/msailer1234/JWST_Simulation", - "avatar": "https://avatars.githubusercontent.com/u/91031900?v=4", - "description": null, + "uid": "github/pmoulos/metaseqR2", + "url": "https://github.com/pmoulos/metaseqR2", + "rel": "/software/repository/github/pmoulos/metaseqR2", + "avatar": "https://avatars0.githubusercontent.com/u/2979517?v=4", + "description": "An R package for the analysis, meta-analysis and result reporting of RNA-Seq gene expression data - Next Generation!", "topics": [] }, { - "uid": "github/USU-Analytics-Solution-Center/Bruno.jl", - "url": "https://github.com/USU-Analytics-Solution-Center/Bruno.jl", - "rel": "/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", - "avatar": "https://avatars.githubusercontent.com/u/94191472?v=4", - "description": "Repository for the Julia package with financial tools for data generation, asset pricing and strategy testing", + "uid": "github/stefanoMP/massiveGST", + "url": "https://github.com/stefanoMP/massiveGST", + "rel": "/software/repository/github/stefanoMP/massiveGST", + "avatar": "https://avatars.githubusercontent.com/u/18364052?v=4", + "description": null, "topics": [] }, { - "uid": "github/ocean-eddy-cpt/gcm-filters", - "url": "https://github.com/ocean-eddy-cpt/gcm-filters", - "rel": "/software/repository/github/ocean-eddy-cpt/gcm-filters", - "avatar": "https://avatars.githubusercontent.com/u/54479818?v=4", - "description": "Diffusion-based Spatial Filtering of Gridded Data", + "uid": "github/mcataneo/mochi_class_public", + "url": "https://github.com/mcataneo/mochi_class_public", + "rel": "/software/repository/github/mcataneo/mochi_class_public", + "avatar": "https://avatars.githubusercontent.com/u/10965274?v=4", + "description": null, "topics": [] }, { - "uid": "github/hippke/pulses", - "url": "https://github.com/hippke/pulses", - "rel": "/software/repository/github/hippke/pulses", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "Periodic Spectral Modulations Arise from Non-random Spacing of Spectral Absorption Lines", + "uid": "github/mcataneo/pyLDT-cosmo", + "url": "https://github.com/mcataneo/pyLDT-cosmo", + "rel": "/software/repository/github/mcataneo/pyLDT-cosmo", + "avatar": "https://avatars.githubusercontent.com/u/10965274?v=4", + "description": "Python code to generate matter PDF predictions in Large Deviation Theory", "topics": [] }, { - "uid": "github/hippke/tls", - "url": "https://github.com/hippke/tls", - "rel": "/software/repository/github/hippke/tls", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "Transit Least Squares: An optimized transit-fitting algorithm to search for periodic transits of small planets", - "topics": [ - "planet", - "exoplanet", - "transit", - "least", - "squares", - "algorithm", - "tls", - "periodic", - "python", - "exoplanets" - ] - }, - { - "uid": "github/hippke/pandora", - "url": "https://github.com/hippke/Pandora", - "rel": "/software/repository/github/hippke/pandora", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "A fast transit-fitting algorithm to search for transits of exomoons", + "uid": "github/EdoardoCarlesi/cmbeasy", + "url": "https://github.com/EdoardoCarlesi/cmbeasy", + "rel": "/software/repository/github/EdoardoCarlesi/cmbeasy", + "avatar": "https://avatars.githubusercontent.com/u/4144770?v=4", + "description": "My CMBEASY implementation", "topics": [] }, { - "uid": "github/hippke/PyOSE", - "url": "https://github.com/hippke/PyOSE", - "rel": "/software/repository/github/hippke/PyOSE", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "Stacked exomoons with the Orbital Sampling Effect", + "uid": "github/PopGenClustering/Clumppling", + "url": "https://github.com/PopGenClustering/Clumppling", + "rel": "/software/repository/github/PopGenClustering/Clumppling", + "avatar": "https://avatars.githubusercontent.com/u/113391343?v=4", + "description": null, "topics": [] }, { - "uid": "github/hippke/communication", - "url": "https://github.com/hippke/communication", - "rel": "/software/repository/github/hippke/communication", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "Interstellar communication", + "uid": "github/jmsdsouzaPhD/GWDALI", + "url": "https://github.com/jmsdsouzaPhD/GWDALI", + "rel": "/software/repository/github/jmsdsouzaPhD/GWDALI", + "avatar": "https://avatars.githubusercontent.com/u/70079111?v=4", + "description": "A Fisher-Based Software for Parameter Estimation from Gravitational Waves", "topics": [] }, { - "uid": "github/hippke/wotan", - "url": "https://github.com/hippke/wotan", - "rel": "/software/repository/github/hippke/wotan", - "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", - "description": "Automagically remove trends from time-series data", + "uid": "github/johentsch/ms3", + "url": "https://github.com/johentsch/ms3", + "rel": "/software/repository/github/johentsch/ms3", + "avatar": "https://avatars.githubusercontent.com/u/42718519?v=4", + "description": "A parser for annotated MuseScore 3 files.", "topics": [ - "light", - "curve", - "transit", - "outlier", - "detrend", - "exoplanets", - "robust-estimators", - "exoplanet" + "corpus", + "corpus-data", + "corpus-generator", + "corpus-processing", + "corpus-tools", + "musescore", + "musescore2", + "musescore3", + "musescore4", + "music-score", + "music-scores", + "parser", + "sheet-music", + "sheet-music-parser", + "tsv", + "tsv-files", + "tsv-format", + "xml-parser", + "xml-parser-library", + "xml-parsing" ] }, { - "uid": "github/schmidtfa/pyrasa", - "url": "https://github.com/schmidtfa/pyrasa", - "rel": "/software/repository/github/schmidtfa/pyrasa", - "avatar": "https://avatars.githubusercontent.com/u/50550513?v=4", - "description": "a package for spectral parametrization in python based on the IRASA algorithm", + "uid": "github/flintproject/Flint", + "url": "https://github.com/flintproject/Flint", + "rel": "/software/repository/github/flintproject/Flint", + "avatar": "https://avatars2.githubusercontent.com/u/11284249?v=4", + "description": "A simulator for biological and physiological models", "topics": [ - "aperiodic-exponent", - "eeg", - "electrophysiology", - "meg", - "neuroscience", - "oscillations", - "power-spectral-density", - "time-frequency-analysis" + "simulator", + "biology", + "physiology", + "cellml", + "phml", + "sbml", + "ode", + "sde" ] }, { - "uid": "github/horvatovichlab/MSIWarp", - "url": "https://github.com/horvatovichlab/MSIWarp", - "rel": "/software/repository/github/horvatovichlab/MSIWarp", - "avatar": "https://avatars.githubusercontent.com/u/19997545?v=4", - "description": "MAss spectra alignment tool for MSI data", + "uid": "github/ekaterinailin/AltaiPony", + "url": "https://github.com/ekaterinailin/AltaiPony", + "rel": "/software/repository/github/ekaterinailin/AltaiPony", + "avatar": "https://avatars.githubusercontent.com/u/26961696?v=4", + "description": "Find flares in Kepler, K2, and TESS light curves. Notebooks for quickstart inside.", "topics": [] }, { - "uid": "github/mcsiple/mmrefpoints", - "url": "https://github.com/mcsiple/mmrefpoints", - "rel": "/software/repository/github/mcsiple/mmrefpoints", - "avatar": "https://avatars.githubusercontent.com/u/2936426?v=4", - "description": "A package for simulating marine mammal abundance and calculating reference points.", - "topics": [ - "bycatch", - "fisheries-management", - "marine-mammals", - "r", - "shiny" - ] - }, - { - "uid": "github/druglogics/pydruglogics", - "url": "https://github.com/druglogics/pydruglogics", - "rel": "/software/repository/github/druglogics/pydruglogics", - "avatar": "https://avatars.githubusercontent.com/u/56073408?v=4", - "description": "Construct, optimize Boolean models and perform in-silico perturbations of the models.", - "topics": [ - "bliss", - "boolean-model", - "drug-target-interactions", - "genetic-algorithm", - "hsa", - "drug-synergy" - ] + "uid": "github/LabLaskin/MSIGen", + "url": "https://github.com/LabLaskin/MSIGen", + "rel": "/software/repository/github/LabLaskin/MSIGen", + "avatar": "https://avatars.githubusercontent.com/u/58985859?v=4", + "description": "Python package for visualizing MS images from line scans", + "topics": [] }, { - "uid": "github/djgroen/MPWide", - "url": "https://github.com/djgroen/MPWide", - "rel": "/software/repository/github/djgroen/MPWide", - "avatar": "https://avatars.githubusercontent.com/u/4508093?v=4", - "description": "MPWide is a communication library for message passing across wide area networks.", + "uid": "github/wbalmer/backtracks", + "url": "https://github.com/wbalmer/backtracks", + "rel": "/software/repository/github/wbalmer/backtracks", + "avatar": "https://avatars.githubusercontent.com/u/39763022?v=4", + "description": "Python package to fit relative astrometry with background star motion tracks. ", "topics": [] }, { - "uid": "github/voutcn/megahit", - "url": "https://github.com/voutcn/megahit", - "rel": "/software/repository/github/voutcn/megahit", - "avatar": "https://avatars.githubusercontent.com/u/6329785?v=4", - "description": "Ultra-fast and memory-efficient (meta-)genome assembler", - "topics": [ - "bioinformatics", - "metagenomics", - "succinct", - "data-structures", - "genomics", - "genome-assembly" - ] + "uid": "github/wbalmer/backtrack", + "url": "https://github.com/wbalmer/backtrack", + "rel": "/software/repository/github/wbalmer/backtrack", + "avatar": "https://avatars.githubusercontent.com/u/39763022?v=4", + "description": "Python package to fit relative astrometry with background star motion tracks. ", + "topics": [] }, { - "uid": "github/taoliu/MACS", - "url": "https://github.com/macs3-project/MACS", - "rel": "/software/repository/github/taoliu/MACS", - "avatar": "https://avatars.githubusercontent.com/u/66320751?v=4", - "description": "MACS -- Model-based Analysis of ChIP-Seq", - "topics": [ - "chip-seq", - "atac-seq", - "dnase-seq", - "peak-caller", - "python", - "poisson-equation", - "macs" - ] + "uid": "github/quantling/pyndl", + "url": "https://github.com/quantling/pyndl", + "rel": "/software/repository/github/quantling/pyndl", + "avatar": "https://avatars.githubusercontent.com/u/26636658?v=4", + "description": "pyndl implements a Naive discriminative learning which is a learning and classification models based on the Rescorla-Wagner equations in python3.", + "topics": [] }, { - "uid": "github/AUTODIAL/AutoEIS", - "url": "https://github.com/AUTODIAL/AutoEIS", - "rel": "/software/repository/github/AUTODIAL/AutoEIS", - "avatar": "https://avatars.githubusercontent.com/u/90283960?v=4", - "description": "A tool for automated extraction of equivalent circuit models (ECM) from electrochemical impedance spectroscopy (EIS) data", + "uid": "github/turbo-sim/TurboFlow", + "url": "https://github.com/turbo-sim/turboflow", + "rel": "/software/repository/github/turbo-sim/TurboFlow", + "avatar": "https://avatars.githubusercontent.com/u/171229041?v=4", + "description": "Meanline model for performance prediction and preliminary design of turbomachinery", "topics": [] }, { - "uid": "github/mes5k/amap-align", - "url": "https://github.com/mes5k/amap-align", - "rel": "/software/repository/github/mes5k/amap-align", - "avatar": "https://avatars.githubusercontent.com/u/492641?v=4", - "description": "Automatically exported from code.google.com/p/amap-align", + "uid": "github/tombisho/dsSyntheticClient", + "url": "https://github.com/tombisho/dsSyntheticClient", + "rel": "/software/repository/github/tombisho/dsSyntheticClient", + "avatar": "https://avatars.githubusercontent.com/u/8521654?v=4", + "description": null, "topics": [] }, { - "uid": "github/brian-lau/MatlabAUC", - "url": "https://github.com/brian-lau/MatlabAUC", - "rel": "/software/repository/github/brian-lau/MatlabAUC", - "avatar": "https://avatars.githubusercontent.com/u/5180236?v=4", - "description": "Matlab code for the area under the receiver operating curve (AUC) and confidence intervals", + "uid": "github/pmkruyen/dearscholar", + "url": "https://github.com/pmkruyen/dearscholar", + "rel": "/software/repository/github/pmkruyen/dearscholar", + "avatar": "https://avatars1.githubusercontent.com/u/20207147?v=4", + "description": "DearScholar: An open-source smartphone app for longitudinal scientific qualitative and quantitative (self-report) diary, log and survey research", "topics": [] }, { - "uid": "github/arhstevens/DarkSage", - "url": "https://github.com/arhstevens/DarkSage", - "rel": "/software/repository/github/arhstevens/DarkSage", - "avatar": "https://avatars.githubusercontent.com/u/12620672?v=4", - "description": "The Dark Sage semi-analytic model", + "uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", + "url": "https://github.com/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", + "rel": "/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", + "avatar": "https://avatars.githubusercontent.com/u/31296160?v=4", + "description": "Code underlying the paper Wenzl, Chen, Bean 2023 https://arxiv.org/abs/2308.05892", "topics": [] }, { - "uid": "github/ctkelley/MultiPrecisionArrays.jl", - "url": "https://github.com/ctkelley/MultiPrecisionArrays.jl", - "rel": "/software/repository/github/ctkelley/MultiPrecisionArrays.jl", - "avatar": "https://avatars.githubusercontent.com/u/10243067?v=4", - "description": "Mulitprecision Arrays", - "topics": [ - "iterative-methods", - "iterative-refinement", - "linear-solvers", - "multiprecision" - ] + "uid": "github/manchunyeung/wolensing", + "url": "https://github.com/manchunyeung/wolensing", + "rel": "/software/repository/github/manchunyeung/wolensing", + "avatar": "https://avatars.githubusercontent.com/u/84583396?v=4", + "description": null, + "topics": [] }, { - "uid": "github/DaymudeLab/assembly-theory", - "url": "https://github.com/DaymudeLab/assembly-theory", - "rel": "/software/repository/github/DaymudeLab/assembly-theory", - "avatar": "https://avatars.githubusercontent.com/u/120212518?v=4", - "description": "Open, reproducible calculation of assembly indices in Rust, Python, or the command line", - "topics": [ - "assembly-theory" - ] + "uid": "github/gkulkarni/QLF", + "url": "https://github.com/gkulkarni/QLF", + "rel": "/software/repository/github/gkulkarni/QLF", + "avatar": "https://avatars.githubusercontent.com/u/1303822?v=4", + "description": null, + "topics": [] }, { - "uid": "github/mwaskom/seaborn", - "url": "https://github.com/mwaskom/seaborn", - "rel": "/software/repository/github/mwaskom/seaborn", - "avatar": "https://avatars.githubusercontent.com/u/315810?v=4", - "description": "Statistical data visualization in Python", - "topics": [ - "python", - "data-visualization", - "data-science", - "matplotlib", - "pandas" - ] + "uid": "github/EGaraldi/corecon", + "url": "https://github.com/EGaraldi/corecon", + "rel": "/software/repository/github/EGaraldi/corecon", + "avatar": "https://avatars.githubusercontent.com/u/13069963?v=4", + "description": "User-friendly collection of Reionization-related constraints", + "topics": [] }, { - "uid": "github/trevisanj/PFANT", - "url": "https://github.com/trevisanj/PFANT", - "rel": "/software/repository/github/trevisanj/PFANT", - "avatar": "https://avatars.githubusercontent.com/u/11477764?v=4", - "description": "Stellar Spectral Synthesis code for Astronomy", + "uid": "github/EGaraldi/ZInCo", + "url": "https://github.com/EGaraldi/ZInCo", + "rel": "/software/repository/github/EGaraldi/ZInCo", + "avatar": "https://avatars.githubusercontent.com/u/13069963?v=4", + "description": "The ZInCo code for manipulating GADGET initial conditions", "topics": [] }, { - "uid": "github/mikecokina/elisa", - "url": "https://github.com/mikecokina/elisa", - "rel": "/software/repository/github/mikecokina/elisa", - "avatar": "https://avatars.githubusercontent.com/u/23422027?v=4", - "description": null, + "uid": "github/Shamrock-code/Shamrock", + "url": "https://github.com/Shamrock-code/Shamrock", + "rel": "/software/repository/github/Shamrock-code/Shamrock", + "avatar": "https://avatars.githubusercontent.com/u/120786926?v=4", + "description": "The Shamrock Framework, an open-source, multi-GPU hydrodynamics framework for astrophysics. Scales seamlessly from laptops to exascale supercomputers, supporting SPH, AMR, and more.", "topics": [ - "eclipsing-binaries", - "astronomy", - "analysis", - "modeling", - "physic" + "amr", + "astrophysics", + "mpi", + "multi-gpu", + "sph", + "sycl", + "adaptivecpp", + "oneapi", + "phantom", + "ramses", + "zeus", + "fluid-simulation-engine", + "fluid-dynamics", + "exascale" ] }, { - "uid": "github/MyWebIntelligence/MyWebIntelligencePython", - "url": "https://github.com/MyWebIntelligence/MyWebIntelligencePython", - "rel": "/software/repository/github/MyWebIntelligence/MyWebIntelligencePython", - "avatar": "https://avatars.githubusercontent.com/u/9200321?v=4", - "description": "Class Python App of My Web Intelligence", + "uid": "github/awsteiner/bamr", + "url": "https://github.com/awsteiner/bamr", + "rel": "/software/repository/github/awsteiner/bamr", + "avatar": "https://avatars.githubusercontent.com/u/5480902?v=4", + "description": "Bayesian Analysis of neutron star Mass and Radius observations", "topics": [] }, { - "uid": "github/freelawproject/eyecite", - "url": "https://github.com/freelawproject/eyecite", - "rel": "/software/repository/github/freelawproject/eyecite", - "avatar": "https://avatars.githubusercontent.com/u/6012898?v=4", - "description": "Find legal citations in any block of text", + "uid": "github/awsteiner/o2scl", + "url": "https://github.com/awsteiner/o2scl", + "rel": "/software/repository/github/awsteiner/o2scl", + "avatar": "https://avatars.githubusercontent.com/u/5480902?v=4", + "description": "Object-oriented Scientific Computing Library", "topics": [] }, { - "uid": "github/scwatts/fastspar", - "url": "https://github.com/scwatts/fastspar", - "rel": "/software/repository/github/scwatts/fastspar", - "avatar": "https://avatars.githubusercontent.com/u/463926?v=4", - "description": "Rapid and scalable correlation estimation for compositional data", + "uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", + "url": "https://github.com/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", + "rel": "/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Obejcts", + "avatar": "https://avatars.githubusercontent.com/u/103255610?v=4", + "description": null, "topics": [] }, { - "uid": "github/AlidesChimin/SATA", - "url": "https://github.com/AlidesChimin/SATA", - "rel": "/software/repository/github/AlidesChimin/SATA", - "avatar": "https://avatars.githubusercontent.com/u/172922030?v=4", + "uid": "github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", + "url": "https://github.com/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", + "rel": "/software/repository/github/dusanmarceta/Synthetic-Population-of-Interstellar-Objects", + "avatar": "https://avatars.githubusercontent.com/u/103255610?v=4", "description": null, "topics": [] }, { - "uid": "github/nebblu/ReACT", - "url": "https://github.com/nebblu/ReACT", - "rel": "/software/repository/github/nebblu/ReACT", - "avatar": "https://avatars.githubusercontent.com/u/45853389?v=4", - "description": "ReACT public repo", + "uid": "github/basehc/IPEV", + "url": "https://github.com/basehc/IPEV", + "rel": "/software/repository/github/basehc/IPEV", + "avatar": "https://avatars.githubusercontent.com/u/84138203?v=4", + "description": "Software tool to identify prokaryotic and eukaryotic virus-derived sequences in virome using deep learning. Used to calculate a set of scores that reflect the probability that input sequence fragments are prokaryotic and eukaryotic viral sequences.", "topics": [] }, { - "uid": "github/HWang-Summit/HCGrid", - "url": "https://github.com/HWang-Summit/HCGrid", - "rel": "/software/repository/github/HWang-Summit/HCGrid", - "avatar": "https://avatars.githubusercontent.com/u/43237606?v=4", - "description": "HCGrid is a convolution-based gridding framework for radio astronomy on hybrid computing environments", + "uid": "github/CSSEGISandData/COVID-19", + "url": "https://github.com/CSSEGISandData/COVID-19", + "rel": "/software/repository/github/CSSEGISandData/COVID-19", + "avatar": "https://avatars.githubusercontent.com/u/60674295?v=4", + "description": "Novel Coronavirus (COVID-19) Cases, provided by JHU CSSE", "topics": [ - "astronomy", - "gridding", - "heterogeneous-computing", - "gpu", - "cuda" + "johns-hopkins-university", + "systems-science", + "engineering", + "covid-19", + "2019-ncov", + "coronavirus", + "csse", + "jhu" ] }, { - "uid": "github/studla/RYUTO", - "url": "https://github.com/studla/RYUTO", - "rel": "/software/repository/github/studla/RYUTO", - "avatar": "https://avatars.githubusercontent.com/u/18547406?v=4", - "description": "Ryuto: Network-Flow based Transcriptome Reconstruction", - "topics": [] - }, - { - "uid": "github/D4san/MultiREx-public", - "url": "https://github.com/D4san/MultiREx-public", - "rel": "/software/repository/github/D4san/MultiREx-public", - "avatar": "https://avatars.githubusercontent.com/u/114251096?v=4", - "description": "Massive planetary spectra generator", - "topics": [] - }, - { - "uid": "github/aomlomics/tourmaline", - "url": "https://github.com/aomlomics/tourmaline", - "rel": "/software/repository/github/aomlomics/tourmaline", - "avatar": "https://avatars.githubusercontent.com/u/65427403?v=4", - "description": "Amplicon sequence processing workflow using QIIME 2 and Snakemake", + "uid": "github/JuliaQuantumControl/GRAPE.jl", + "url": "https://github.com/JuliaQuantumControl/GRAPE.jl", + "rel": "/software/repository/github/JuliaQuantumControl/GRAPE.jl", + "avatar": "https://avatars.githubusercontent.com/u/88603846?v=4", + "description": "Gradient Ascent Pulse Engineering in Julia", "topics": [ - "noaa-omics-software", - "amplicon-sequence-variants", - "dada2", - "deblur", - "snakemake" + "julia", + "grape", + "quantum", + "optimal-control" ] }, { - "uid": "github/marbl/Winnowmap", - "url": "https://github.com/marbl/Winnowmap", - "rel": "/software/repository/github/marbl/Winnowmap", - "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", - "description": "Long read / genome alignment software", - "topics": [ - "pacbio", - "nanopore", - "genome-analysis" - ] + "uid": "github/LinkedEarth/pylipd", + "url": "https://github.com/LinkedEarth/pylipd", + "rel": "/software/repository/github/LinkedEarth/pylipd", + "avatar": "https://avatars.githubusercontent.com/u/17730148?v=4", + "description": "PyLiPD: Creating, editing, and manipulating LiPD-formatted datasets in Python", + "topics": [] }, { - "uid": "github/marbl/Mash", - "url": "https://github.com/marbl/Mash", - "rel": "/software/repository/github/marbl/Mash", - "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", - "description": "Fast genome and metagenome distance estimation using MinHash", + "uid": "github/BradGreig/21CMMC", + "url": "https://github.com/BradGreig/21CMMC", + "rel": "/software/repository/github/BradGreig/21CMMC", + "avatar": "https://avatars.githubusercontent.com/u/16087482?v=4", + "description": "A parallelised, Monte Carlo Markov Chain analysis tool for the epoch of reionisation (EoR)", "topics": [] }, { - "uid": "github/marbl/MashMap", - "url": "https://github.com/marbl/MashMap", - "rel": "/software/repository/github/marbl/MashMap", - "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", - "description": "A fast approximate aligner for long DNA sequences", + "uid": "github/pjedge/longshot", + "url": "https://github.com/pjedge/longshot", + "rel": "/software/repository/github/pjedge/longshot", + "avatar": "https://avatars.githubusercontent.com/u/6822632?v=4", + "description": "diploid SNV caller for error-prone reads", "topics": [] }, { - "uid": "github/marbl/Krona", - "url": "https://github.com/marbl/Krona", - "rel": "/software/repository/github/marbl/Krona", - "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", - "description": "Interactively explore metagenomes and more from a web browser.", + "uid": "github/omerveille/VSMOD", + "url": "https://github.com/omerveille/VSMOD", + "rel": "/software/repository/github/omerveille/VSMOD", + "avatar": "https://avatars.githubusercontent.com/u/8049869?v=4", + "description": null, "topics": [] }, { - "uid": "github/vallis/mc3pta", - "url": "https://github.com/vallis/mc3pta", - "rel": "/software/repository/github/vallis/mc3pta", - "avatar": "https://avatars.githubusercontent.com/u/492720?v=4", - "description": "Bayesian-inference tools for pulsar-timing-array data", + "uid": "github/jdidion/atropos", + "url": "https://github.com/jdidion/atropos", + "rel": "/software/repository/github/jdidion/atropos", + "avatar": "https://avatars.githubusercontent.com/u/125854?v=4", + "description": "An NGS read trimming tool that is specific, sensitive, and speedy. (production)", + "topics": [ + "python3", + "bioinformatics", + "ngs", + "trimming" + ] + }, + { + "uid": "github/dr-joe-wirth/primerForge", + "url": "https://github.com/dr-joe-wirth/primerForge", + "rel": "/software/repository/github/dr-joe-wirth/primerForge", + "avatar": "https://avatars.githubusercontent.com/u/71667025?v=4", + "description": "software to identify primers that can distinguish genomes", "topics": [] }, { - "uid": "github/vallis/libstempo", - "url": "https://github.com/vallis/libstempo", - "rel": "/software/repository/github/vallis/libstempo", - "avatar": "https://avatars.githubusercontent.com/u/492720?v=4", - "description": "libstempo \u2014 a Python wrapper for tempo2", + "uid": "github/uedaLabR/nanoDoc", + "url": "https://github.com/uedaLabR/nanoDoc", + "rel": "/software/repository/github/uedaLabR/nanoDoc", + "avatar": "https://avatars.githubusercontent.com/u/70622849?v=4", + "description": "RNA modification detection using Nanopore raw reads with Deep One Class classification", "topics": [] }, { - "uid": "github/kno10/python-kmedoids", - "url": "https://github.com/kno10/python-kmedoids", - "rel": "/software/repository/github/kno10/python-kmedoids", - "avatar": "https://avatars.githubusercontent.com/u/3997899?v=4", - "description": "Fast K-Medoids clustering in Python with FasterPAM", + "uid": "github/Yu-Group/simChef", + "url": "https://github.com/Yu-Group/simChef", + "rel": "/software/repository/github/Yu-Group/simChef", + "avatar": "https://avatars.githubusercontent.com/u/26810483?v=4", + "description": "An R package to facilitate PCS simulation studies.", "topics": [] }, { - "uid": "github/DrafProject/elmada", - "url": "https://github.com/DrafProject/elmada", - "rel": "/software/repository/github/DrafProject/elmada", - "avatar": "https://avatars.githubusercontent.com/u/62054152?v=4", - "description": "elmada: Dynamic electricity carbon emission factors and prices for Europe", + "uid": "github/Yu-Group/veridical-flow", + "url": "https://github.com/Yu-Group/veridical-flow", + "rel": "/software/repository/github/Yu-Group/veridical-flow", + "avatar": "https://avatars.githubusercontent.com/u/26810483?v=4", + "description": "Making it easier to build stable, trustworthy data-science pipelines.", "topics": [ - "carbon-emissions", - "electricity-prices", - "electricity-market", - "demand-response", - "energy-system-modeling", - "python", - "marginal-emissions" + "machine-learning", + "python3", + "data-science", + "workflow", + "stability", + "ml", + "ai", + "statistics", + "pandas", + "preprocessing", + "ensembling", + "tutorial" ] }, { - "uid": "github/siavashk/pycpd", - "url": "https://github.com/siavashk/pycpd", - "rel": "/software/repository/github/siavashk/pycpd", - "avatar": "https://avatars.githubusercontent.com/u/1020752?v=4", - "description": "Pure Numpy Implementation of the Coherent Point Drift Algorithm", + "uid": "github/phac-nml/biohansel", + "url": "https://github.com/phac-nml/biohansel", + "rel": "/software/repository/github/phac-nml/biohansel", + "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", + "description": "subtype microbial whole-genome sequencing (WGS) data using SNV targeting k-mer subtyping schemes.", + "topics": [] + }, + { + "uid": "github/phac-nml/staramr", + "url": "https://github.com/phac-nml/staramr", + "rel": "/software/repository/github/phac-nml/staramr", + "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", + "description": "Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.", "topics": [ - "point-cloud", - "registration", - "expectation-maximization", - "python" + "antimicrobial-resistance", + "genomics", + "bioinformatics" ] }, { - "uid": "github/spectralcode/OCTproZ", - "url": "https://github.com/spectralcode/OCTproZ", - "rel": "/software/repository/github/spectralcode/OCTproZ", - "avatar": "https://avatars2.githubusercontent.com/u/51879191?v=4", - "description": "OCTproZ is an open source software for optical coherence tomography processing and visualization.", + "uid": "github/phac-nml/mob-suite", + "url": "https://github.com/phac-nml/mob-suite", + "rel": "/software/repository/github/phac-nml/mob-suite", + "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", + "description": "MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies", "topics": [ - "optical-coherence-tomography", - "oct", - "optics", - "medical-image-processing", - "gpu-processing", - "dsp", - "mhz-oct", - "qt", - "cuda", - "visualization" + "plasmids", + "typing", + "clustering", + "assemblies" ] }, { - "uid": "github/4dn-dcic/pairix", - "url": "https://github.com/4dn-dcic/pairix", - "rel": "/software/repository/github/4dn-dcic/pairix", - "avatar": "https://avatars.githubusercontent.com/u/23222469?v=4", - "description": "1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates", + "uid": "github/snugel/cas-offinder", + "url": "https://github.com/snugel/cas-offinder", + "rel": "/software/repository/github/snugel/cas-offinder", + "avatar": "https://avatars.githubusercontent.com/u/5906282?v=4", + "description": "An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.", + "topics": [] + }, + { + "uid": "github/fruzsinaagocs/oscode", + "url": "https://github.com/fruzsinaagocs/oscode", + "rel": "/software/repository/github/fruzsinaagocs/oscode", + "avatar": "https://avatars3.githubusercontent.com/u/19972401?v=4", + "description": "Code for efficient solution of oscillatory ordinary differential equations", "topics": [ - "hi-c", - "random-access", - "bgzip", - "bioinformatics", - "c", - "python", - "pypairix", - "pairs" + "numerical-methods", + "differential-equations", + "oscillator", + "runge-kutta", + "wentzel-kramers-brillouin", + "numpy" ] }, { - "uid": "github/SCIInstitute/UncertainSCI", - "url": "https://github.com/SCIInstitute/UncertainSCI", - "rel": "/software/repository/github/SCIInstitute/UncertainSCI", - "avatar": "https://avatars.githubusercontent.com/u/1399384?v=4", - "description": null, - "topics": [] + "uid": "github/miniufo/xinvert", + "url": "https://github.com/miniufo/xinvert", + "rel": "/software/repository/github/miniufo/xinvert", + "avatar": "https://avatars.githubusercontent.com/u/9312831?v=4", + "description": "Invert geophysical fluid dynamic problems (elliptic partial differential equations) using SOR iteration method.", + "topics": [ + "successive-over-relaxation", + "inversion-problem", + "atmospheric-science", + "oceanography", + "meteorology", + "omega-equation", + "gill-matsuno-model", + "munk-stommel", + "wind-driven-circulation", + "eliassen-model", + "pv-inversion", + "streamfunction", + "velocity-potential", + "geophysical-fluid-dynamics", + "poisson-equation" + ] }, { - "uid": "github/nitadori/SCF-FDPS", - "url": "https://github.com/nitadori/SCF-FDPS", - "rel": "/software/repository/github/nitadori/SCF-FDPS", - "avatar": "https://avatars.githubusercontent.com/u/4830914?v=4", - "description": null, - "topics": [] + "uid": "github/champsproject/ldds", + "url": "https://github.com/champsproject/ldds", + "rel": "/software/repository/github/champsproject/ldds", + "avatar": "https://avatars.githubusercontent.com/u/58516742?v=4", + "description": "Python package for computing and visualizing Lagrangian Descriptors in Dynamical Systems", + "topics": [ + "dynamical-systems", + "lagrangian-descriptors", + "python" + ] }, { - "uid": "github/microplastics-cluster/fragment-mnp", - "url": "https://github.com/microplastics-cluster/fragment-mnp", - "rel": "/software/repository/github/microplastics-cluster/fragment-mnp", - "avatar": "https://avatars.githubusercontent.com/u/99332985?v=4", - "description": "Model of Micro and NanoPlastic FRAGMentation in the ENvironmenT", + "uid": "github/mglodge/MANTA-Ray", + "url": "https://github.com/mglodge/MANTA-Ray", + "rel": "/software/repository/github/mglodge/MANTA-Ray", + "avatar": "https://avatars.githubusercontent.com/u/126600438?v=4", + "description": "MANTA-Ray (Modified Absorption of Non-spherical Tiny Aggregates in the RAYleigh regime) is a model used to estimate the optical properties of fractal aggregates. It correctly predicts the amount of absorption that occurs for particles in the long-wavelength limit, to within an average error of 30%.", "topics": [] }, { - "uid": "github/james-m-osborn/astrosat", - "url": "https://github.com/james-m-osborn/astrosat", - "rel": "/software/repository/github/james-m-osborn/astrosat", - "avatar": "https://avatars.githubusercontent.com/u/25983686?v=4", + "uid": "github/Fenyutanchan/solar-vSI", + "url": "https://github.com/Fenyutanchan/solar-vSI", + "rel": "/software/repository/github/Fenyutanchan/solar-vSI", + "avatar": "https://avatars.githubusercontent.com/u/32387646?v=4", "description": null, "topics": [] }, { - "uid": "github/cedrus-opensource/pyxid", - "url": "https://github.com/cedrus-opensource/pyxid", - "rel": "/software/repository/github/cedrus-opensource/pyxid", - "avatar": "https://avatars.githubusercontent.com/u/457188?v=4", - "description": "Pure python library for communicating with Cedrus XID devices", - "topics": [] + "uid": "github/abinit/abinit", + "url": "https://github.com/abinit/abinit", + "rel": "/software/repository/github/abinit/abinit", + "avatar": "https://avatars.githubusercontent.com/u/15837788?v=4", + "description": "The official github mirror of the Abinit repository. We welcome bug fixes and improvements. Note that most of the active developments are hosted on our https://gitlab.abinit.org/ server. Before embarking on making significant changes, please contact the Abinit group.", + "topics": [ + "ab-initio", + "dfpt", + "kohn-sham", + "mbpt", + "density-functional-theory", + "abinit", + "fortran" + ] }, { - "uid": "github/WilliamLwj/PyXAB", - "url": "https://github.com/WilliamLwj/PyXAB", - "rel": "/software/repository/github/WilliamLwj/PyXAB", - "avatar": "https://avatars.githubusercontent.com/u/28475711?v=4", - "description": "PyXAB - A Python Library for X-Armed Bandit and Online Blackbox Optimization Algorithms", + "uid": "github/jacob-long/jtools", + "url": "https://github.com/jacob-long/jtools", + "rel": "/software/repository/github/jacob-long/jtools", + "avatar": "https://avatars.githubusercontent.com/u/4957401?v=4", + "description": "Tools for summarizing/visualizing regressions and other helpful stuff", "topics": [ - "algorithm", - "bandit-algorithms", - "blackbox-optimization", - "optimization", - "lipschitz-bandit", - "hyperparameter-optimization", - "hyperparameter-tuning", - "reinforcement-learning", - "data-science", - "machine-learning-algorithms", - "online-learning", - "continuous-armed-bandit", - "x-armed-bandit", - "automl", - "machine-learning", - "optimization-algorithms" + "r", + "social-sciences", + "r-package" ] }, { - "uid": "github/geza-kovacs/tran_k2", - "url": "https://github.com/geza-kovacs/tran_k2", - "rel": "/software/repository/github/geza-kovacs/tran_k2", - "avatar": "https://avatars.githubusercontent.com/u/72140288?v=4", - "description": "Planetary transit search in the presence of stellar variability and instrumental systematics", + "uid": "github/christopher-vollmers/C3POa", + "url": "https://github.com/christopher-vollmers/C3POa", + "rel": "/software/repository/github/christopher-vollmers/C3POa", + "avatar": "https://avatars.githubusercontent.com/u/28308271?v=4", + "description": "(Concatemeric Consensus Caller with Partial Order alignments) is a computational pipeline for calling consensi on R2C2 nanopore data.", "topics": [] }, { - "uid": "github/jianghuaijie/scLRTC", - "url": "https://github.com/jianghuaijie/scLRTC", - "rel": "/software/repository/github/jianghuaijie/scLRTC", - "avatar": "https://avatars.githubusercontent.com/u/30695578?v=4", - "description": "scLRTC:imputation for single-cell RNA-seq data via low rank tensor completion", + "uid": "github/IDEMSInternational/ExcelToShiny", + "url": "https://github.com/IDEMSInternational/ExcelToShiny", + "rel": "/software/repository/github/IDEMSInternational/ExcelToShiny", + "avatar": "https://avatars.githubusercontent.com/u/44813009?v=4", + "description": "A system for creating Shiny dashboards using Excel spreadsheets", "topics": [] }, { - "uid": "github/lmwalkowicz/Cheetah", - "url": "https://github.com/lmwalkowicz/Cheetah", - "rel": "/software/repository/github/lmwalkowicz/Cheetah", - "avatar": "https://avatars.githubusercontent.com/u/2147416?v=4", - "description": null, - "topics": [] + "uid": "github/sylabs/singularity", + "url": "https://github.com/sylabs/singularity", + "rel": "/software/repository/github/sylabs/singularity", + "avatar": "https://avatars.githubusercontent.com/u/32401844?v=4", + "description": "SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.", + "topics": [ + "containers", + "hpc", + "linux" + ] }, { - "uid": "github/vincentvaneylen/k2photometry", - "url": "https://github.com/vincentvaneylen/k2photometry", - "rel": "/software/repository/github/vincentvaneylen/k2photometry", - "avatar": "https://avatars.githubusercontent.com/u/11032500?v=4", - "description": "Read, reduce and detrend K2 photometry and search for transiting planets", + "uid": "github/jdeast/EXOFASTv2", + "url": "https://github.com/jdeast/EXOFASTv2", + "rel": "/software/repository/github/jdeast/EXOFASTv2", + "avatar": "https://avatars.githubusercontent.com/u/10566919?v=4", + "description": "An exoplanet transit, radial velocity, astrometry, and stellar fitting software package in IDL", "topics": [] }, { - "uid": "github/MP-Gadget/bigfile", - "url": "https://github.com/MP-Gadget/bigfile", - "rel": "/software/repository/github/MP-Gadget/bigfile", - "avatar": "https://avatars.githubusercontent.com/u/38799051?v=4", - "description": "A reproducible massively parallel IO library for hierarchical data", + "uid": "github/Nextomics/nextsv", + "url": "https://github.com/Nextomics/nextsv", + "rel": "/software/repository/github/Nextomics/nextsv", + "avatar": "https://avatars.githubusercontent.com/u/17420776?v=4", + "description": "automated structural variation detection for long-read sequencing", "topics": [] }, { - "uid": "github/candYgene/siga", - "url": "https://github.com/candYgene/siga", - "rel": "/software/repository/github/candYgene/siga", - "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", - "description": "Semantically Interoperable Genome Annotations", - "topics": [ - "rdf", - "rdflib", - "genome-annotation", - "gff", - "triples" - ] - }, - { - "uid": "github/candYgene/abg-ld", - "url": "https://github.com/candYgene/abg-ld", - "rel": "/software/repository/github/candYgene/abg-ld", - "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", - "description": "Linked Data Platform for Animal Breeding & Genomics", + "uid": "github/Nextomics/NextDenovo", + "url": "https://github.com/Nextomics/NextDenovo", + "rel": "/software/repository/github/Nextomics/NextDenovo", + "avatar": "https://avatars.githubusercontent.com/u/17420776?v=4", + "description": "Fast and accurate de novo assembler for long reads", "topics": [ - "linked-data", - "rdf", - "virtuoso-server", - "genome-annotation", - "qtl", - "triples", - "sparql", - "genomics", - "animal-breeding", - "database" + "genome-assembly", + "long-reads", + "assembler", + "oxford-nanopore", + "pacbio" ] }, { - "uid": "github/candYgene/QTM", - "url": "https://github.com/candYgene/QTM", - "rel": "/software/repository/github/candYgene/QTM", - "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", - "description": "QTLTableMiner++ tool for mining tables in scientific articles", + "uid": "github/WhaleConnect/whaleconnect", + "url": "https://github.com/WhaleConnect/whaleconnect", + "rel": "/software/repository/github/WhaleConnect/whaleconnect", + "avatar": "https://avatars.githubusercontent.com/u/174279898?v=4", + "description": "Cross-platform network communication software", "topics": [] }, { - "uid": "github/candYgene/pbg-ld", - "url": "https://github.com/candYgene/pbg-ld", - "rel": "/software/repository/github/candYgene/pbg-ld", - "avatar": "https://avatars2.githubusercontent.com/u/27219573?v=4", - "description": "Linked Data Platform for Plant Breeding & Genomics", + "uid": "github/aaryapatil/tapify", + "url": "https://github.com/aaryapatil/tapify", + "rel": "/software/repository/github/aaryapatil/tapify", + "avatar": "https://avatars.githubusercontent.com/u/15609154?v=4", + "description": "Multitaper spectrum for time-series analysis", "topics": [ - "linked-data", - "rdf", - "virtuoso-server", - "genome-annotation", - "qtl", - "triples", - "sparql", - "genomics", - "plant-breeding", - "solanaceae" + "spectral-analysis", + "time-series-analysis" ] }, { - "uid": "github/jgieseler/solarmach", - "url": "https://github.com/jgieseler/solarmach", - "rel": "/software/repository/github/jgieseler/solarmach", - "avatar": "https://avatars.githubusercontent.com/u/39489154?v=4", - "description": "Python package of the multi-spacecraft longitudinal configuration plotter Solar-MACH", + "uid": "github/spiketools/spiketools", + "url": "https://github.com/spiketools/spiketools", + "rel": "/software/repository/github/spiketools/spiketools", + "avatar": "https://avatars.githubusercontent.com/u/91502149?v=4", + "description": "Tools for analyzing spiking data.", "topics": [ - "esa", - "heliophysics", - "spacephysics", - "spaceweather" + "neuroscience", + "spikes", + "single-unit", + "spike-analysis", + "python", + "data-analysis" ] }, { - "uid": "github/MegaMorph/galapagos-c", - "url": "https://github.com/MegaMorph/galapagos-c", - "rel": "/software/repository/github/MegaMorph/galapagos-c", - "avatar": "https://avatars.githubusercontent.com/u/6997950?v=4", - "description": "Andreas Hiemer's re-implementation and extension of GALAPAGOS in C", - "topics": [] - }, - { - "uid": "github/sfeeney/hh0", - "url": "https://github.com/sfeeney/hh0", - "rel": "/software/repository/github/sfeeney/hh0", - "avatar": "https://avatars.githubusercontent.com/u/7850768?v=4", - "description": "Hierarchical Hubble Constant Inference", + "uid": "github/scwatts/fastspar", + "url": "https://github.com/scwatts/fastspar", + "rel": "/software/repository/github/scwatts/fastspar", + "avatar": "https://avatars.githubusercontent.com/u/463926?v=4", + "description": "Rapid and scalable correlation estimation for compositional data", "topics": [] }, { - "uid": "github/sfeeney/ddspectra", - "url": "https://github.com/sfeeney/ddspectra", - "rel": "/software/repository/github/sfeeney/ddspectra", - "avatar": "https://avatars.githubusercontent.com/u/7850768?v=4", - "description": "SSSpaNG: Stellar Spectra as Sparse Non-Gaussian Processes", - "topics": [] + "uid": "github/Beuth-Erdelt/DBMS-Benchmarker", + "url": "https://github.com/Beuth-Erdelt/DBMS-Benchmarker", + "rel": "/software/repository/github/Beuth-Erdelt/DBMS-Benchmarker", + "avatar": "https://avatars.githubusercontent.com/u/17198143?v=4", + "description": "DBMS-Benchmarker is a Python-based application-level blackbox benchmark tool for Database Management Systems (DBMS). It connects to a given list of DBMS (via JDBC) and runs a given list of parametrized and randomized (SQL) benchmark queries. Evaluations are available via a Python interface and on an interactive multi-dimensional dashboard.", + "topics": [ + "dbms", + "benchmarking", + "python", + "sql", + "jdbc", + "agplv3" + ] }, { - "uid": "github/sxs-collaboration/spectre", - "url": "https://github.com/sxs-collaboration/spectre", - "rel": "/software/repository/github/sxs-collaboration/spectre", - "avatar": "https://avatars.githubusercontent.com/u/26882595?v=4", - "description": "SpECTRE is a code for multi-scale, multi-physics problems in astrophysics and gravitational physics.", + "uid": "github/tommyau/bamclipper", + "url": "https://github.com/tommyau/bamclipper", + "rel": "/software/repository/github/tommyau/bamclipper", + "avatar": "https://avatars.githubusercontent.com/u/12424384?v=4", + "description": "Remove primer sequence from BAM alignments by soft-clipping", "topics": [] }, { - "uid": "github/sxs-collaboration/gwsurrogate", - "url": "https://github.com/sxs-collaboration/gwsurrogate", - "rel": "/software/repository/github/sxs-collaboration/gwsurrogate", - "avatar": "https://avatars.githubusercontent.com/u/26882595?v=4", - "description": "An easy to use interface to gravitational wave surrogate models", + "uid": "github/KALMUS-Color-Toolkit/KALMUS", + "url": "https://github.com/KALMUS-Color-Toolkit/KALMUS", + "rel": "/software/repository/github/KALMUS-Color-Toolkit/KALMUS", + "avatar": "https://avatars.githubusercontent.com/u/77697488?v=4", + "description": "KALMUS Color Toolkit for color analysis and visualization in film studies.", "topics": [ - "surrogate-models", - "python", - "gravitational-waveforms" + "image-analysis", + "video-processing", + "digital-humanities", + "python3", + "pypi-package" ] }, { - "uid": "github/gtw2i/GA-Galaxy", - "url": "https://github.com/gtw2i/GA-Galaxy", - "rel": "/software/repository/github/gtw2i/GA-Galaxy", - "avatar": "https://avatars.githubusercontent.com/u/20209148?v=4", - "description": null, - "topics": [] + "uid": "github/numba/numba", + "url": "https://github.com/numba/numba", + "rel": "/software/repository/github/numba/numba", + "avatar": "https://avatars2.githubusercontent.com/u/1628082?v=4", + "description": "NumPy aware dynamic Python compiler using LLVM", + "topics": [ + "python", + "numpy", + "llvm", + "compiler", + "cuda", + "rocm", + "parallel" + ] }, { - "uid": "github/ekaterinailin/AltaiPony", - "url": "https://github.com/ekaterinailin/AltaiPony", - "rel": "/software/repository/github/ekaterinailin/AltaiPony", - "avatar": "https://avatars.githubusercontent.com/u/26961696?v=4", - "description": "Find flares in Kepler, K2, and TESS light curves. Notebooks for quickstart inside.", + "uid": "github/rochoa85/NTDHealth_Forms", + "url": "https://github.com/rochoa85/NTDHealth_Forms", + "rel": "/software/repository/github/rochoa85/NTDHealth_Forms", + "avatar": "https://avatars.githubusercontent.com/u/2809964?v=4", + "description": "Based on the OpenMRS HTML Form Entry module, you can find in this github repository a set of forms personalized for neglected tropical virus, including clinical assesment, personal history and epidemiological data. ", "topics": [] }, { - "uid": "github/sciris/sciris", - "url": "https://github.com/sciris/sciris", - "rel": "/software/repository/github/sciris/sciris", - "avatar": "https://avatars.githubusercontent.com/u/43378155?v=4", - "description": "Fast, flexible tools to simplify scientific Python", + "uid": "github/JuliaAI/Imbalance.jl", + "url": "https://github.com/JuliaAI/Imbalance.jl", + "rel": "/software/repository/github/JuliaAI/Imbalance.jl", + "avatar": "https://avatars.githubusercontent.com/u/80715868?v=4", + "description": "A Julia toolbox with resampling methods to correct for class imbalance.", "topics": [ - "python", - "computational-science", - "containers", - "data-science", - "matplotlib", - "numpy", - "parallelization", - "plotting", - "scientific-computing", - "utilities" + "class-imbalance", + "classification", + "machine-learning" ] }, { - "uid": "github/PyLops/pylops-mpi", - "url": "https://github.com/PyLops/pylops-mpi", - "rel": "/software/repository/github/PyLops/pylops-mpi", - "avatar": "https://avatars.githubusercontent.com/u/74298005?v=4", - "description": "MPI-powered PyLops with MPI4Py", + "uid": "github/tcollett/LensPop", + "url": "https://github.com/tcollett/LensPop", + "rel": "/software/repository/github/tcollett/LensPop", + "avatar": "https://avatars.githubusercontent.com/u/1520902?v=4", + "description": null, "topics": [] }, { - "uid": "github/frescigno/magpy_rv", - "url": "https://github.com/frescigno/magpy_rv", - "rel": "/software/repository/github/frescigno/magpy_rv", - "avatar": "https://avatars.githubusercontent.com/u/80278728?v=4", - "description": "Modelling Activity with Gaussian process regression in Python", - "topics": [] + "uid": "github/OceanGenomics/mudskipper", + "url": "https://github.com/OceanGenomics/mudskipper", + "rel": "/software/repository/github/OceanGenomics/mudskipper", + "avatar": "https://avatars.githubusercontent.com/u/41634132?v=4", + "description": "A tool for projecting genomic alignments to transcriptomic coordinates", + "topics": [ + "bioinformatics", + "rna-seq", + "scrna-seq", + "transcriptomics", + "converter" + ] }, { - "uid": "github/anuwu/DAGN-Blindtest", - "url": "https://github.com/anuwu/GOTHIC", - "rel": "/software/repository/github/anuwu/DAGN-Blindtest", - "avatar": "https://avatars.githubusercontent.com/u/45432794?v=4", - "description": "Double Nuclei Galaxy Finder from SDSS. Check https://arxiv.org/abs/2011.12177", + "uid": "github/gtonkinhill/fastbaps", + "url": "https://github.com/gtonkinhill/fastbaps", + "rel": "/software/repository/github/gtonkinhill/fastbaps", + "avatar": "https://avatars.githubusercontent.com/u/10625107?v=4", + "description": "A fast approximation to a Dirichlet Process Mixture model (DPM) for clustering genetic data", "topics": [ - "sdss", - "astronomy", - "astrophysics", - "astroinformatics", - "image-processing", - "image-classification", - "rare-object-detection" + "bayesian", + "hierarchical-clustering", + "genetics" ] }, { - "uid": "github/anuwu/GOTHIC", - "url": "https://github.com/anuwu/GOTHIC", - "rel": "/software/repository/github/anuwu/GOTHIC", - "avatar": "https://avatars.githubusercontent.com/u/45432794?v=4", - "description": "Double Nuclei Galaxy Finder from SDSS. Check https://arxiv.org/abs/2011.12177", + "uid": "github/Music-and-Culture-Technology-Lab/omnizart", + "url": "https://github.com/Music-and-Culture-Technology-Lab/omnizart", + "rel": "/software/repository/github/Music-and-Culture-Technology-Lab/omnizart", + "avatar": "https://avatars.githubusercontent.com/u/46015501?v=4", + "description": "Omniscient Mozart, being able to transcribe everything in the music, including vocal, drum, chord, beat, instruments, and more.", "topics": [ - "sdss", - "astronomy", - "astrophysics", - "astroinformatics", - "image-processing", - "image-classification", - "rare-object-detection" + "music-transcription", + "drum-transcription", + "vocal", + "beat-tracking", + "chord", + "music-information-retrieval" ] }, { - "uid": "github/jfalconbarroso/BAYES-LOSVD", - "url": "https://github.com/jfalconbarroso/BAYES-LOSVD", - "rel": "/software/repository/github/jfalconbarroso/BAYES-LOSVD", - "avatar": "https://avatars.githubusercontent.com/u/41444018?v=4", - "description": "Non-parametric recovery of the LOSVD of galaxies", + "uid": "github/jmiramont/mcsm-benchs", + "url": "https://github.com/jmiramont/mcsm-benchs", + "rel": "/software/repository/github/jmiramont/mcsm-benchs", + "avatar": "https://avatars.githubusercontent.com/u/62579770?v=4", + "description": "A toolbox that provides a common framework for benchmarks of multi-component signal processing methods.", "topics": [] }, { - "uid": "github/TravisWheelerLab/VIBES", - "url": "https://github.com/TravisWheelerLab/VIBES", - "rel": "/software/repository/github/TravisWheelerLab/VIBES", - "avatar": "https://avatars.githubusercontent.com/u/19337416?v=4", - "description": "Viral Integrations in Bacterial genomES", + "uid": "github/basp-group/BUQO", + "url": "https://github.com/basp-group/BUQO", + "rel": "/software/repository/github/basp-group/BUQO", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "BUQO: Bayesian Uncertainty Quantification by Optimisation", "topics": [] }, { - "uid": "github/TravisWheelerLab/NINJA", - "url": "https://github.com/TravisWheelerLab/NINJA", - "rel": "/software/repository/github/TravisWheelerLab/NINJA", - "avatar": "https://avatars.githubusercontent.com/u/19337416?v=4", - "description": "Nearly Infinite Neighbor Joining Application", + "uid": "github/basp-group/R2D2-SII", + "url": "https://github.com/basp-group/R2D2-SII", + "rel": "/software/repository/github/basp-group/R2D2-SII", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Residual-to-Residual DNN Series for computational imaging with application to SII in astronomy", "topics": [] }, { - "uid": "github/gadomski/antimeridian", - "url": "https://github.com/gadomski/antimeridian", - "rel": "/software/repository/github/gadomski/antimeridian", - "avatar": "https://avatars.githubusercontent.com/u/58314?v=4", - "description": "Correct GeoJSON geometries that cross the 180th meridian", - "topics": [ - "antimeridian", - "geojson", - "python", - "geospatial" - ] + "uid": "github/basp-group/R2D2-RI", + "url": "https://github.com/basp-group/R2D2-RI", + "rel": "/software/repository/github/basp-group/R2D2-RI", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Residual-to-Residual DNN Series for computational imaging with application to RI in astronomy", + "topics": [] }, { - "uid": "github/erf-model/ERF", - "url": "https://github.com/erf-model/ERF", - "rel": "/software/repository/github/erf-model/ERF", - "avatar": "https://avatars.githubusercontent.com/u/59941622?v=4", - "description": "Energy Research and Forecasting Model", + "uid": "github/basp-group/sopt", + "url": "https://github.com/basp-group/sopt", + "rel": "/software/repository/github/basp-group/sopt", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "SOPT: Sparse OPTimisation.", "topics": [] }, { - "uid": "github/phenomecentre/nPYc-Toolbox", - "url": "https://github.com/phenomecentre/nPYc-Toolbox", - "rel": "/software/repository/github/phenomecentre/nPYc-Toolbox", - "avatar": "https://avatars.githubusercontent.com/u/7632103?v=4", - "description": "The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.", - "topics": [ - "quality-control", - "metabolomics", - "metabolic-phenotyping" - ] + "uid": "github/basp-group/purify", + "url": "https://github.com/basp-group/purify", + "rel": "/software/repository/github/basp-group/purify", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Software for radio-interferometric imaging 1.0", + "topics": [] }, { - "uid": "github/witseie/fpgaperm", - "url": "https://github.com/witseie/fpgaperm", - "rel": "/software/repository/github/witseie/fpgaperm", - "avatar": "https://avatars.githubusercontent.com/u/10668039?v=4", - "description": "Permutation testing for GWAS using FPGAs", + "uid": "github/basp-group/Optical-Interferometry-Trilinear", + "url": "https://github.com/basp-group/Optical-Interferometry-Trilinear", + "rel": "/software/repository/github/basp-group/Optical-Interferometry-Trilinear", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Nonconvex optimisation approach to optical-interferometric imaging", "topics": [] }, { - "uid": "github/Santiso-Group/despasito", - "url": "https://github.com/Santiso-Group/despasito", - "rel": "/software/repository/github/Santiso-Group/despasito", - "avatar": "https://avatars.githubusercontent.com/u/61851070?v=4", - "description": "DESPASITO: Determining Equilibrium State and Parametrization Application for SAFT, Intended for Thermodynamic Output", - "topics": [ - "saft", - "thermodynamic-calculations", - "eos", - "parametrization", - "equation-of-state", - "equations-of-state" - ] + "uid": "github/basp-group/AIRI", + "url": "https://github.com/basp-group/AIRI", + "rel": "/software/repository/github/basp-group/AIRI", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "\"AI for Regularisation in Imaging\" plug-and-play algorithms for computational imaging", + "topics": [] }, { - "uid": "github/Shamrock-code/Shamrock", - "url": "https://github.com/Shamrock-code/Shamrock", - "rel": "/software/repository/github/Shamrock-code/Shamrock", - "avatar": "https://avatars.githubusercontent.com/u/120786926?v=4", - "description": "The Shamrock Framework, an open-source, multi-GPU hydrodynamics framework for astrophysics. Scales seamlessly from laptops to exascale supercomputers, supporting SPH, AMR, and more.", - "topics": [ - "amr", - "astrophysics", - "mpi", - "multi-gpu", - "sph", - "sycl", - "adaptivecpp", - "oneapi", - "phantom", - "ramses", - "zeus", - "fluid-simulation-engine", - "fluid-dynamics", - "exascale" - ] + "uid": "github/basp-group/faceted-hypersara", + "url": "https://github.com/basp-group/Faceted-HyperSARA", + "rel": "/software/repository/github/basp-group/faceted-hypersara", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Faceted-HyperSARA", + "topics": [] }, { - "uid": "github/songweizhi/Binning_refiner", - "url": "https://github.com/songweizhi/Binning_refiner", - "rel": "/software/repository/github/songweizhi/Binning_refiner", - "avatar": "https://avatars.githubusercontent.com/u/11952278?v=4", - "description": "Improving genome bins through the combination of different binning programs ", - "topics": [ - "metagenomics", - "binning", - "refinement", - "binning-refiner", - "bioinformatics" - ] + "uid": "github/basp-group/SARA-PPD", + "url": "https://github.com/basp-group/SARA-PPD", + "rel": "/software/repository/github/basp-group/SARA-PPD", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "SARA-PPD: Preconditioned primal-dual algorithm for radio-interferometric imaging", + "topics": [] }, { - "uid": "github/MichaelCretignier/Rassine_public", - "url": "https://github.com/MichaelCretignier/Rassine_public", - "rel": "/software/repository/github/MichaelCretignier/Rassine_public", - "avatar": "https://avatars.githubusercontent.com/u/44569244?v=4", - "description": "RASSINE is a code using alpha shape to normalise 1d spectra", + "uid": "github/basp-group/SARA-dimensionality-reduction", + "url": "https://github.com/basp-group/SARA-dimensionality-reduction", + "rel": "/software/repository/github/basp-group/SARA-dimensionality-reduction", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "SARA-dimensionality-reduction: Fourier Dimensionality Reduction for radio-interferometric imaging with SARA", "topics": [] }, { - "uid": "github/barklem/kaulakys", - "url": "https://github.com/barklem/kaulakys", - "rel": "/software/repository/github/barklem/kaulakys", - "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", - "description": "Code to calculate cross sections and rate coefficients for inelastic collisions between Rydberg atoms and hydrogen atoms according to the free electron model of Kaulakys (1986, 1991).", + "uid": "github/basp-group/Puri-Psi", + "url": "https://github.com/basp-group/Puri-Psi", + "rel": "/software/repository/github/basp-group/Puri-Psi", + "avatar": "https://avatars.githubusercontent.com/u/3670102?v=4", + "description": "Software platform for Scalable radio-interferometric imaging 2.0", "topics": [] }, { - "uid": "github/barklem/abo-cross", - "url": "https://github.com/barklem/abo-cross", - "rel": "/software/repository/github/barklem/abo-cross", - "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", - "description": "Interpolate in Anstee-Barklem-O'Mara cross sections for collisional broadening due to hydrogen", - "topics": [] + "uid": "github/combine-lab/salmon", + "url": "https://github.com/COMBINE-lab/salmon", + "rel": "/software/repository/github/combine-lab/salmon", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "\ud83d\udc1f \ud83c\udf63 \ud83c\udf71 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment", + "topics": [ + "quasi-mapping", + "bioinformatics", + "rna-seq", + "rnaseq", + "salmon", + "quantification", + "sailfish", + "c-plus-plus", + "gene-expression", + "scrna-seq", + "single-cell", + "10x", + "selective-alignment", + "rna-seq-quantification", + "single-cell-rna-seq", + "transcriptome" + ] }, { - "uid": "github/barklem/mswavef", - "url": "https://github.com/barklem/mswavef", - "rel": "/software/repository/github/barklem/mswavef", - "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", - "description": "Code to calculate hydrogenic and non-hydrogenic momentum-space electronic wavefunctions", + "uid": "github/CodeEagle22/SIRITVIS", + "url": "https://github.com/CodeEagle22/SIRITVIS", + "rel": "/software/repository/github/CodeEagle22/SIRITVIS", + "avatar": "https://avatars.githubusercontent.com/u/139004320?v=4", + "description": null, "topics": [] }, { - "uid": "github/barklem/hlinop", - "url": "https://github.com/barklem/hlinop", - "rel": "/software/repository/github/barklem/hlinop", - "avatar": "https://avatars.githubusercontent.com/u/12593099?v=4", - "description": "Codes for modelling hydrogen line opacity in stellar atmospheres. See Barklem & Piskunov (2003)", - "topics": [] + "uid": "github/COSIMA/regional-mom6", + "url": "https://github.com/COSIMA/regional-mom6", + "rel": "/software/repository/github/COSIMA/regional-mom6", + "avatar": "https://avatars.githubusercontent.com/u/12704607?v=4", + "description": "Automatic generation of regional configurations of the Modular Ocean Model 6 (MOM6) in Python", + "topics": [ + "mom6", + "ocean-modelling", + "python", + "regional-model" + ] }, { - "uid": "github/tool-bin/ukbcc", - "url": "https://github.com/tool-bin/ukbcc", - "rel": "/software/repository/github/tool-bin/ukbcc", - "avatar": "https://avatars.githubusercontent.com/u/67130159?v=4", - "description": "UKBB Cohort Curator. ", + "uid": "github/moldyn/msmhelper", + "url": "https://github.com/moldyn/msmhelper", + "rel": "/software/repository/github/moldyn/msmhelper", + "avatar": "https://avatars.githubusercontent.com/u/45035941?v=4", + "description": "Helper function for Markov State Models", "topics": [] }, { - "uid": "github/michalc/OpenTTDLab", - "url": "https://github.com/michalc/OpenTTDLab", - "rel": "/software/repository/github/michalc/OpenTTDLab", - "avatar": "https://avatars.githubusercontent.com/u/13877?v=4", - "description": "A Python framework for running reproducible experiments using OpenTTD", - "topics": [ - "openttd" - ] + "uid": "github/gui11aume/starcode", + "url": "https://github.com/gui11aume/starcode", + "rel": "/software/repository/github/gui11aume/starcode", + "avatar": "https://avatars.githubusercontent.com/u/1017195?v=4", + "description": "All pairs search and sequence clustering", + "topics": [] }, { - "uid": "github/mh-skjelvareid/synaptus", - "url": "https://github.com/mh-skjelvareid/synaptus", - "rel": "/software/repository/github/mh-skjelvareid/synaptus", - "avatar": "https://avatars.githubusercontent.com/u/16107898?v=4", - "description": "A Matlab/Octave toolbox for synthetic aperture ultrasound imaging", + "uid": "github/dkoboldt/varscan", + "url": "https://github.com/dkoboldt/varscan", + "rel": "/software/repository/github/dkoboldt/varscan", + "avatar": "https://avatars.githubusercontent.com/u/5421635?v=4", + "description": "Variant calling and somatic mutation/CNV detection for next-generation sequencing data", "topics": [] }, { - "uid": "github/caimeng2/seesus", - "url": "https://github.com/caimeng2/seesus", - "rel": "/software/repository/github/caimeng2/seesus", - "avatar": "https://avatars.githubusercontent.com/u/51100838?v=4", - "description": "A Python package that identifies 17 Sustainable Development Goals and their 169 Targets in text, and classifies into social, environmental, and economic sustainability.", + "uid": "github/jorisparet/partycls", + "url": "https://github.com/jorisparet/partycls", + "rel": "/software/repository/github/jorisparet/partycls", + "avatar": "https://avatars.githubusercontent.com/u/57349320?v=4", + "description": "Unsupervised learning of structure in systems of interacting particles.", "topics": [ - "classification", - "regular-expressions", - "sdg", - "sustainability", - "sustainability-developoment-goals", - "text-mining" + "python", + "clustering", + "machine-learning", + "molecular-dynamics", + "physics" ] }, { - "uid": "github/cbalbin-FIU/Epitopedia", - "url": "https://github.com/cbalbin-bio/Epitopedia", - "rel": "/software/repository/github/cbalbin-FIU/Epitopedia", - "avatar": "https://avatars.githubusercontent.com/u/76659347?v=4", - "description": "Epitopedia: identifying molecular mimicry of known immune epitopes", + "uid": "github/VegeWaterDynamics/motrainer", + "url": "https://github.com/VegeWaterDynamics/motrainer", + "rel": "/software/repository/github/VegeWaterDynamics/motrainer", + "avatar": "https://avatars.githubusercontent.com/u/62881306?v=4", + "description": "Distributed Measurement Operator Trainer for Data Assimilation Applications", "topics": [ - "bioinformatics", - "computational-biology", - "structural-biology", - "molecular-mimicry", - "epitopes", - "iedb", - "pdb", - "drug-repurposing" + "data-assimilation", + "distributed-computing", + "kalman-filter", + "machine-learning" ] }, { - "uid": "github/Razumovskyy/MARFA", - "url": "https://github.com/Razumovskyy/MARFA", - "rel": "/software/repository/github/Razumovskyy/MARFA", - "avatar": "https://avatars.githubusercontent.com/u/49871805?v=4", - "description": "A streamlined Fortran tool for broad-spectrum high-resolution atmospheric absorption analysis. It provides PT-table outputs, ideal for quick integration with radiative transfer codes.", - "topics": [ - "atmospheric-modelling", - "spectroscopy", - "absorption-spectra" - ] + "uid": "github/ZhangGroup-MITChemistry/OpenNucleome", + "url": "https://github.com/ZhangGroup-MITChemistry/OpenNucleome", + "rel": "/software/repository/github/ZhangGroup-MITChemistry/OpenNucleome", + "avatar": "https://avatars.githubusercontent.com/u/38541214?v=4", + "description": "OpenNucleome is an open-source software designed for conducting molecular dynamics (MD) simulations of the human nucleus. This software streamlines the process of setting up whole nucleus simulations through just a few lines of Python scripting.", + "topics": [] }, { - "uid": "github/i4Ds/Karabo-Pipeline", - "url": "https://github.com/i4Ds/Karabo-Pipeline", - "rel": "/software/repository/github/i4Ds/Karabo-Pipeline", - "avatar": "https://avatars.githubusercontent.com/u/9019602?v=4", - "description": "The Karabo Pipeline can be used as Digital Twin for SKA", - "topics": [ - "ska" - ] + "uid": "github/ridgelab/rampAtlas", + "url": "https://github.com/ridgelab/rampAtlas", + "rel": "/software/repository/github/ridgelab/rampAtlas", + "avatar": "https://avatars.githubusercontent.com/u/12803582?v=4", + "description": "Code used to retrieve, organize, and analyze data for the Ramp Atlas", + "topics": [] }, { - "uid": "github/alexji/LESSPayne", - "url": "https://github.com/alexji/LESSPayne", - "rel": "/software/repository/github/alexji/LESSPayne", - "avatar": "https://avatars.githubusercontent.com/u/3082382?v=4", - "description": "Labeling Echelle Spectra with SMHR and Payne", + "uid": "github/ridgelab/ExtRampOnline", + "url": "https://github.com/ridgelab/ExtRampOnline", + "rel": "/software/repository/github/ridgelab/ExtRampOnline", + "avatar": "https://avatars.githubusercontent.com/u/12803582?v=4", + "description": null, "topics": [] }, { - "uid": "github/WelbornGroup/ELECTRIC", - "url": "https://github.com/WelbornGroup/ELECTRIC", - "rel": "/software/repository/github/WelbornGroup/ELECTRIC", - "avatar": "https://avatars2.githubusercontent.com/u/49160194?v=4", - "description": "ELECTRIC: Electric fields Leveraged from multipole Expansion Calculations in Tinker Rapid Interface Code.", + "uid": "github/dhubber/seren", + "url": "https://github.com/dhubber/seren", + "rel": "/software/repository/github/dhubber/seren", + "avatar": "https://avatars.githubusercontent.com/u/4923605?v=4", + "description": "SEREN SPH code (Hubber et al. 2011) for astrophysical hydrodynamics simulations", "topics": [] }, { - "uid": "github/mlower/rmnest", - "url": "https://github.com/mlower/rmnest", - "rel": "/software/repository/github/mlower/rmnest", - "avatar": "https://avatars.githubusercontent.com/u/26099415?v=4", - "description": "A standard (and generalised) rotation measures fitting package written in Python.", + "uid": "github/labgem/PPanGGOLiN", + "url": "https://github.com/labgem/PPanGGOLiN", + "rel": "/software/repository/github/labgem/PPanGGOLiN", + "avatar": "https://avatars.githubusercontent.com/u/50515420?v=4", + "description": "Build a partitioned pangenome graph from microbial genomes", "topics": [ - "python", - "radio", - "astronomy", - "astrophysics", - "faraday-rotation", - "pulsar", - "frb" + "comparative-genomics", + "bioinformatics", + "microbial-genomics", + "microbiology", + "bacteria", + "pangenome" ] }, { - "uid": "github/mscaudill/openseize", - "url": "https://github.com/mscaudill/openseize", - "rel": "/software/repository/github/mscaudill/openseize", - "avatar": "https://avatars.githubusercontent.com/u/12617099?v=4", - "description": "Digital Signal Processing for Big EEGs", - "topics": [ - "big-data", - "eeg", - "seizure", - "signal-processing" - ] + "uid": "github/VMBoehm/MADLens", + "url": "https://github.com/VMBoehm/MADLens", + "rel": "/software/repository/github/VMBoehm/MADLens", + "avatar": "https://avatars.githubusercontent.com/u/22053912?v=4", + "description": "a differentiable lensing simulator", + "topics": [] }, { - "uid": "github/markur4/plotastic", - "url": "https://github.com/markur4/plotastic", - "rel": "/software/repository/github/markur4/plotastic", - "avatar": "https://avatars.githubusercontent.com/u/98951648?v=4", - "description": "Streamlining statistical analysis by using plotting keywords in Python.", + "uid": "github/mbillingr/libgdf", + "url": "https://github.com/mbillingr/libgdf", + "rel": "/software/repository/github/mbillingr/libgdf", + "avatar": "https://avatars.githubusercontent.com/u/2392396?v=4", + "description": "C++ implementation of GDF - \"a general dataformat for biosignals\" version V2.20.", + "topics": [] + }, + { + "uid": "github/streamlit/streamlit", + "url": "https://github.com/streamlit/streamlit", + "rel": "/software/repository/github/streamlit/streamlit", + "avatar": "https://avatars.githubusercontent.com/u/45109972?v=4", + "description": "Streamlit \u2014 The fastest way to build data apps in Python", "topics": [ - "anova", - "data-analysis", + "python", + "machine-learning", "data-science", + "deep-learning", "data-visualization", - "hypothesis-testing", - "matplotlib", - "omnibus", - "pairwise-testing", - "pingouin", - "plotting", - "python", - "seaborn", - "statistical-tests", - "statistics", - "ttest", - "user-friendly" + "streamlit", + "data-analysis", + "developer-tools" ] }, { - "uid": "github/VirtualPlantLab/PlantSimEngine.jl", - "url": "https://github.com/VirtualPlantLab/PlantSimEngine.jl", - "rel": "/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", - "avatar": "https://avatars.githubusercontent.com/u/130992956?v=4", - "description": "A simulation engine for models related to plants", + "uid": "github/vembrane/vembrane", + "url": "https://github.com/vembrane/vembrane", + "rel": "/software/repository/github/vembrane/vembrane", + "avatar": "https://avatars.githubusercontent.com/u/68063743?v=4", + "description": "vembrane filters VCF records using python expressions", "topics": [ - "crops", - "fspm", - "julia", - "julialang", - "modeling", - "plants", - "simulation" + "bioinformatics", + "filter", + "filter-expression", + "vcf", + "vcf-filtering" ] }, { - "uid": "github/FDPS/FDPS", - "url": "https://github.com/FDPS/FDPS", - "rel": "/software/repository/github/FDPS/FDPS", - "avatar": "https://avatars.githubusercontent.com/u/10935829?v=4", - "description": "Github repository for FDPS", - "topics": [] + "uid": "github/statgen/popscle", + "url": "https://github.com/statgen/popscle", + "rel": "/software/repository/github/statgen/popscle", + "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", + "description": "A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools", + "topics": [ + "rna-seq", + "demultiplex", + "single-cell-sequencing", + "single-cell-rna-seq", + "single-cell-omics" + ] }, { - "uid": "github/cellgeni/cells2visium", - "url": "https://github.com/cellgeni/cells2visium", - "rel": "/software/repository/github/cellgeni/cells2visium", - "avatar": "https://avatars.githubusercontent.com/u/34610939?v=4", - "description": "segmenting H&E images from Visium to assign each visium spot to the number of cell, occupancy and other morphological features of cells", + "uid": "github/statgen/Minimac4", + "url": "https://github.com/statgen/Minimac4", + "rel": "/software/repository/github/statgen/Minimac4", + "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", + "description": "a lower memory and more computationally efficient implementation of the genotype imputation algorithms in minimac/mininac2/minimac3.", "topics": [] }, { - "uid": "github/UM-KevinHe/surtvep", - "url": "https://github.com/UM-KevinHe/surtvep", - "rel": "/software/repository/github/UM-KevinHe/surtvep", - "avatar": "https://avatars.githubusercontent.com/u/67330286?v=4", - "description": null, + "uid": "github/statgen/demuxlet", + "url": "https://github.com/statgen/demuxlet", + "rel": "/software/repository/github/statgen/demuxlet", + "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", + "description": "Genetic multiplexing of barcoded single cell RNA-seq", "topics": [] }, { - "uid": "github/NIFTy-PPL/JAXbind", - "url": "https://github.com/NIFTy-PPL/JAXbind", - "rel": "/software/repository/github/NIFTy-PPL/JAXbind", - "avatar": "https://avatars.githubusercontent.com/u/151748361?v=4", - "description": "Bind any function written in another language to JAX with support for JVP/VJP/batching/jit compilation", - "topics": [] + "uid": "github/vortex-exoplanet/VIP", + "url": "https://github.com/vortex-exoplanet/VIP", + "rel": "/software/repository/github/vortex-exoplanet/VIP", + "avatar": "https://avatars.githubusercontent.com/u/13556028?v=4", + "description": "VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through high-contrast imaging.", + "topics": [ + "data-processing", + "high-contrast-imaging", + "low-rank-approximation", + "image-processing", + "extrasolar-planets-disks", + "pca", + "mcmc" + ] }, { - "uid": "github/casasglobal-org/psymple", - "url": "https://github.com/casasglobal-org/psymple", - "rel": "/software/repository/github/casasglobal-org/psymple", - "avatar": "https://avatars.githubusercontent.com/u/126283305?v=4", + "uid": "github/jonotuke/BREADR", + "url": "https://github.com/jonotuke/BREADR", + "rel": "/software/repository/github/jonotuke/BREADR", + "avatar": "https://avatars.githubusercontent.com/u/1281470?v=4", "description": null, "topics": [] }, { - "uid": "github/PdIPS/CBX", - "url": "https://github.com/PdIPS/CBX", - "rel": "/software/repository/github/PdIPS/CBX", - "avatar": "https://avatars.githubusercontent.com/u/128069149?v=4", - "description": null, + "uid": "github/UM-PEPL/HallThruster.jl", + "url": "https://github.com/UM-PEPL/HallThruster.jl", + "rel": "/software/repository/github/UM-PEPL/HallThruster.jl", + "avatar": "https://avatars.githubusercontent.com/u/102543730?v=4", + "description": "An open-source fluid Hall thruster code", "topics": [] }, { - "uid": "github/rrwick/Filtlong", - "url": "https://github.com/rrwick/Filtlong", - "rel": "/software/repository/github/rrwick/Filtlong", - "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", - "description": "quality filtering tool for long reads", - "topics": [] + "uid": "github/YaleTHz/nelly", + "url": "https://github.com/YaleTHz/nelly", + "rel": "/software/repository/github/YaleTHz/nelly", + "avatar": "https://avatars.githubusercontent.com/u/69858984?v=4", + "description": "Nelly is a package for extracing refractice indices and conductivities from time-domain terahertz spectroscopy data", + "topics": [ + "terahertz", + "conductivity", + "spectroscopy", + "refractive-index" + ] }, { - "uid": "github/rrwick/Deepbinner", - "url": "https://github.com/rrwick/Deepbinner", - "rel": "/software/repository/github/rrwick/Deepbinner", - "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", - "description": "a signal-level demultiplexer for Oxford Nanopore reads", + "uid": "github/msm550/DMATIS", + "url": "https://github.com/msm550/DMATIS", + "rel": "/software/repository/github/msm550/DMATIS", + "avatar": "https://avatars.githubusercontent.com/u/12563057?v=4", + "description": "Dark Matter ATtenuation Importance Sampling", "topics": [] }, { - "uid": "github/rrwick/Bandage", - "url": "https://github.com/rrwick/Bandage", - "rel": "/software/repository/github/rrwick/Bandage", - "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", - "description": "a Bioinformatics Application for Navigating De novo Assembly Graphs Easily", + "uid": "github/ryanoelkers/DIA", + "url": "https://github.com/ryanoelkers/DIA", + "rel": "/software/repository/github/ryanoelkers/DIA", + "avatar": "https://avatars.githubusercontent.com/u/18665480?v=4", + "description": "Difference Image Analysis for Wide-Field Surveys", "topics": [] }, { - "uid": "github/rrwick/Unicycler", - "url": "https://github.com/rrwick/Unicycler", - "rel": "/software/repository/github/rrwick/Unicycler", - "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", - "description": "hybrid assembly pipeline for bacterial genomes", + "uid": "github/scottleedavis/googleearthtoolbox", + "url": "https://github.com/scottleedavis/google-earth-toolbox", + "rel": "/software/repository/github/scottleedavis/googleearthtoolbox", + "avatar": "https://avatars0.githubusercontent.com/u/2914443?v=4", + "description": "Leverages the intuitive interactive virtual globe interface provided by Google Earth, providing programatic tools useful in spatio-temporal analysis.", "topics": [] }, { - "uid": "github/rrwick/Porechop", - "url": "https://github.com/rrwick/Porechop", - "rel": "/software/repository/github/rrwick/Porechop", - "avatar": "https://avatars.githubusercontent.com/u/7053555?v=4", - "description": "adapter trimmer for Oxford Nanopore reads", + "uid": "github/davidkipping/MAH", + "url": "https://github.com/davidkipping/MAH", + "rel": "/software/repository/github/davidkipping/MAH", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": "Calculate the posterior distribution of the \"minimum atmospheric height\" (MAH) of an exoplanet by inputting the joint posterior distribution of the mass and radius.", "topics": [] }, { - "uid": "github/cumbof/honto", - "url": "https://github.com/cumbof/honto", - "rel": "/software/repository/github/cumbof/honto", - "avatar": "https://avatars.githubusercontent.com/u/3764656?v=4", - "description": "A novel method for assessing and measuring homophily in networks", - "topics": [ - "graphs", - "homophily", - "networks" - ] + "uid": "github/davidkipping/MACULA", + "url": "https://github.com/davidkipping/MACULA", + "rel": "/software/repository/github/davidkipping/MACULA", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": null, + "topics": [] }, { - "uid": "github/cumbof/MetaSBT-DBs", - "url": "https://github.com/cumbof/MetaSBT-DBs", - "rel": "/software/repository/github/cumbof/MetaSBT-DBs", - "avatar": "https://avatars.githubusercontent.com/u/3764656?v=4", - "description": "MetaSBT public databases", - "topics": [ - "databases", - "metagenome-assembled-genomes", - "metagenomics", - "reference-genomes", - "sequence-bloom-trees" - ] + "uid": "github/davidkipping/inversebeta", + "url": "https://github.com/davidkipping/inversebeta", + "rel": "/software/repository/github/davidkipping/inversebeta", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": "Inverse transform sampler of the Beta distribution", + "topics": [] }, { - "uid": "github/xdqso/xdqso", - "url": "https://github.com/xdqso/xdqso", - "rel": "/software/repository/github/xdqso/xdqso", - "avatar": "https://avatars.githubusercontent.com/u/9202071?v=4", - "description": "Quasar classification with XD", + "uid": "github/davidkipping/ECCSAMPLES", + "url": "https://github.com/davidkipping/ECCSAMPLES", + "rel": "/software/repository/github/davidkipping/ECCSAMPLES", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": "Sample from an informative prior to enforce a realistic prior on parameters such as the orbital eccentricity of an extrasolar planet. This is done by evaluating the inverse cumulative density function of the prior distribution.", "topics": [] }, { - "uid": "github/mgalardini/pyseer", - "url": "https://github.com/mgalardini/pyseer", - "rel": "/software/repository/github/mgalardini/pyseer", - "avatar": "https://avatars.githubusercontent.com/u/1125215?v=4", - "description": "SEER, reimplemented in python \ud83d\udc0d\ud83d\udd2e", - "topics": [ - "gwas", - "bacteria", - "k-mer", - "reimplementation", - "reproducible-science" - ] + "uid": "github/davidkipping/flicker", + "url": "https://github.com/davidkipping/flicker", + "rel": "/software/repository/github/davidkipping/flicker", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": null, + "topics": [] }, { - "uid": "github/ismael-mendoza/ShapeMeasurementFisherFormalism", - "url": "https://github.com/ismael-mendoza/ShapeMeasurementFisherFormalism", - "rel": "/software/repository/github/ismael-mendoza/ShapeMeasurementFisherFormalism", - "avatar": "https://avatars.githubusercontent.com/u/11745764?v=4", - "description": "Fisher Formalism for Weak Lensing using 1 or 2 Galsim galaxies.", - "topics": [ - "galsim", - "fisher-formalism", - "cosmology" - ] + "uid": "github/davidkipping/LDC3", + "url": "https://github.com/davidkipping/LDC3", + "rel": "/software/repository/github/davidkipping/LDC3", + "avatar": "https://avatars.githubusercontent.com/u/12749250?v=4", + "description": null, + "topics": [] }, { - "uid": "github/akikuno/cstag", - "url": "https://github.com/akikuno/cstag", - "rel": "/software/repository/github/akikuno/cstag", - "avatar": "https://avatars.githubusercontent.com/u/15861316?v=4", - "description": "Python module to manipulate and visualize minimap2's cs tag", + "uid": "github/nathanaelbosch/ProbNumDiffEq.jl", + "url": "https://github.com/nathanaelbosch/ProbNumDiffEq.jl", + "rel": "/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", + "avatar": "https://avatars.githubusercontent.com/u/25008422?v=4", + "description": "Probabilistic Numerical Differential Equation solvers via Bayesian filtering and smoothing", "topics": [ - "bioinformatics", - "python", - "sequence", - "minimap2", - "sam", - "cstag" + "julia", + "differential-equations", + "probabilistic-models", + "ode", + "ode-solver", + "probabilistic-numerics", + "hacktoberfest" ] }, { - "uid": "github/GeomScale/volesti", - "url": "https://github.com/GeomScale/volesti", - "rel": "/software/repository/github/GeomScale/volesti", - "avatar": "https://avatars.githubusercontent.com/u/46485370?v=4", - "description": "Practical volume computation and sampling in high dimensions", - "topics": [ - "geometry", - "statistics", - "polyhedral-computations", - "random-walk", - "sampling", - "volume", - "hit-and-run", - "polytope", - "cran", - "finance", - "monte-carlo", - "scientific-computing" - ] + "uid": "github/aroffringa/aartfaac2ms", + "url": "https://github.com/aroffringa/aartfaac2ms", + "rel": "/software/repository/github/aroffringa/aartfaac2ms", + "avatar": "https://avatars.githubusercontent.com/u/11645549?v=4", + "description": "Converts Aartfaac correlator files to measurement sets", + "topics": [] }, { - "uid": "github/C2SM-RCM/emiproc", - "url": "https://github.com/C2SM-RCM/emiproc", - "rel": "/software/repository/github/C2SM-RCM/emiproc", - "avatar": "https://avatars.githubusercontent.com/u/13691276?v=4", - "description": "Preprocessing of emissions: from any inventory to any model", + "uid": "github/ARDG-NRAO/LibRA", + "url": "https://github.com/ARDG-NRAO/LibRA", + "rel": "/software/repository/github/ARDG-NRAO/LibRA", + "avatar": "https://avatars.githubusercontent.com/u/92064717?v=4", + "description": "A library of algorithms for aperture synthesis radio telescopes", "topics": [] }, { - "uid": "github/songningqiang/CosmoLED", - "url": "https://github.com/songningqiang/CosmoLED", - "rel": "/software/repository/github/songningqiang/CosmoLED", - "avatar": "https://avatars.githubusercontent.com/u/44472287?v=4", - "description": null, + "uid": "github/domeckert/pyproffit", + "url": "https://github.com/domeckert/pyproffit", + "rel": "/software/repository/github/domeckert/pyproffit", + "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", + "description": "Pyproffit is a Python code for the analysis of X-ray brightness profiles from clusters of galaxies", "topics": [] }, { - "uid": "github/phil-mansfield/shellfish", - "url": "https://github.com/phil-mansfield/shellfish", - "rel": "/software/repository/github/phil-mansfield/shellfish", - "avatar": "https://avatars.githubusercontent.com/u/4722826?v=4", - "description": "A Go-based package which identifies the splashback shell of halos from N-body simulations.", + "uid": "github/domeckert/xmm_simulator", + "url": "https://github.com/domeckert/xmm_simulator", + "rel": "/software/repository/github/domeckert/xmm_simulator", + "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", + "description": "Python class to generate mock XMM-Newton spectra and images from 3D cubes extracted from hydro simulations", "topics": [] }, { - "uid": "github/phil-mansfield/gotetra", - "url": "https://github.com/phil-mansfield/gotetra", - "rel": "/software/repository/github/phil-mansfield/gotetra", - "avatar": "https://avatars.githubusercontent.com/u/4722826?v=4", - "description": "A Go-based tracking of cosmic velocity fields through the use of tetrahedra", + "uid": "github/domeckert/hydromass", + "url": "https://github.com/domeckert/hydromass", + "rel": "/software/repository/github/domeckert/hydromass", + "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", + "description": "Hydrostatic mass profile reconstruction using X-ray and/or Sunyaev-Zeldovich data", "topics": [] }, { - "uid": "github/ismaelpessa/PyMUSE", - "url": "https://github.com/ismaelpessa/PyMUSE", - "rel": "/software/repository/github/ismaelpessa/PyMUSE", - "avatar": "https://avatars.githubusercontent.com/u/18149707?v=4", - "description": null, - "topics": [] + "uid": "github/mriener/gausspyplus", + "url": "https://github.com/mriener/gausspyplus", + "rel": "/software/repository/github/mriener/gausspyplus", + "avatar": "https://avatars.githubusercontent.com/u/26575754?v=4", + "description": "Fully automated Gaussian decomposition package for emission line spectra", + "topics": [ + "decomposition", + "python-packages", + "spectra" + ] }, { - "uid": "github/puregome/notebooks", - "url": "https://github.com/puregome/notebooks", - "rel": "/software/repository/github/puregome/notebooks", - "avatar": "https://avatars1.githubusercontent.com/u/63842753?v=4", - "description": "Notebooks of the PuReGoMe Project of the Netherlands eScience Center and Utrecht University.", + "uid": "github/bodenlab/GRASP", + "url": "https://github.com/bodenlab/GRASP", + "rel": "/software/repository/github/bodenlab/GRASP", + "avatar": "https://avatars.githubusercontent.com/u/13028136?v=4", + "description": "Graphical Representation of Ancestral Sequence Predictions", "topics": [] }, { - "uid": "github/Cristianetaniguti/Reads2Map", - "url": "https://github.com/Cristianetaniguti/Reads2Map", - "rel": "/software/repository/github/Cristianetaniguti/Reads2Map", - "avatar": "https://avatars.githubusercontent.com/u/7572527?v=4", - "description": "WDL workflows to build genetic maps from sequencing reads", + "uid": "github/ThomasMBury/ewstools", + "url": "https://github.com/ThomasMBury/ewstools", + "rel": "/software/repository/github/ThomasMBury/ewstools", + "avatar": "https://avatars.githubusercontent.com/u/36854425?v=4", + "description": "Python package for early warning signals (EWS) of bifurcations in time series data.", "topics": [ - "genotyping-by-sequencing", - "haplotypes", - "linkage-mapping", - "pipelines", - "variant-calling", - "wdl" + "time-series", + "forecasting", + "early-warning-signals", + "early-warning-indicators", + "bifurcation", + "critical-transitions", + "resilience-indicators", + "tipping-point", + "autocorrelation", + "power-spectrum", + "bootstrapping", + "complex-systems", + "python", + "ipynb", + "visualization" ] }, { - "uid": "github/kehrlab/PopDel", - "url": "https://github.com/kehrlab/PopDel", - "rel": "/software/repository/github/kehrlab/PopDel", - "avatar": "https://avatars.githubusercontent.com/u/26654073?v=4", - "description": "Population-wide Deletion Calling", + "uid": "github/xianggebenben/GraphSL", + "url": "https://github.com/xianggebenben/GraphSL", + "rel": "/software/repository/github/xianggebenben/GraphSL", + "avatar": "https://avatars.githubusercontent.com/u/13185300?v=4", + "description": "Graph Source Localization Library", "topics": [ - "bioinformatics", - "variant-calling", - "population-genomics", - "sv-calling", - "structural-variation" + "source-localization", + "inverse-problems" ] }, { - "uid": "github/galsci/pysm", - "url": "https://github.com/galsci/pysm", - "rel": "/software/repository/github/galsci/pysm", - "avatar": "https://avatars.githubusercontent.com/u/81497054?v=4", - "description": "PySM 3: Sky emission simulations for Cosmic Microwave Background experiments", + "uid": "github/david-barnett/microViz", + "url": "https://github.com/david-barnett/microViz", + "rel": "/software/repository/github/david-barnett/microViz", + "avatar": "https://avatars.githubusercontent.com/u/33695702?v=4", + "description": "R package for microbiome data visualization. Uses phyloseq, vegan and tidyverse. See website link for docs with visual examples. Docker image available.", "topics": [ - "cosmology", - "cosmic-microwave-background", - "healpix", - "healpy", - "python", - "mpi" + "microbiome", + "microbiome-analysis", + "microbiota", + "rstats", + "r" ] }, { - "uid": "github/rychallener/ThERESA", - "url": "https://github.com/rychallener/theresa", - "rel": "/software/repository/github/rychallener/ThERESA", - "avatar": "https://avatars.githubusercontent.com/u/11049765?v=4", - "description": "3D Exoplanet Cartography", - "topics": [] - }, - { - "uid": "github/justinread/gravsphere", - "url": "https://github.com/justinread/gravsphere", - "rel": "/software/repository/github/justinread/gravsphere", - "avatar": "https://avatars.githubusercontent.com/u/3018208?v=4", - "description": null, - "topics": [] + "uid": "github/CQCL/qujax", + "url": "https://github.com/CQCL/qujax", + "rel": "/software/repository/github/CQCL/qujax", + "avatar": "https://avatars.githubusercontent.com/u/15688781?v=4", + "description": "Simulating quantum circuits with JAX", + "topics": [ + "jax", + "python", + "quantum" + ] }, { - "uid": "github/jeschaef/Graph4Med", - "url": "https://github.com/jeschaef/Graph4Med", - "rel": "/software/repository/github/jeschaef/Graph4Med", - "avatar": "https://avatars.githubusercontent.com/u/34156935?v=4", + "uid": "github/zpliulab/GENELink", + "url": "https://github.com/zpliulab/GENELink", + "rel": "/software/repository/github/zpliulab/GENELink", + "avatar": "https://avatars.githubusercontent.com/u/54654413?v=4", "description": null, "topics": [] }, { - "uid": "github/linnarsson-lab/loompy", - "url": "https://github.com/linnarsson-lab/loompy", - "rel": "/software/repository/github/linnarsson-lab/loompy", - "avatar": "https://avatars.githubusercontent.com/u/10656411?v=4", - "description": "Python implementation of the Loom file format - http://loompy.org", + "uid": "github/zpliulab/GeoBind", + "url": "https://github.com/zpliulab/GeoBind", + "rel": "/software/repository/github/zpliulab/GeoBind", + "avatar": "https://avatars.githubusercontent.com/u/54654413?v=4", + "description": "Segmentation of nucleic acid binding interface on protein surface with geometric deep learning", "topics": [] }, { - "uid": "github/ankushaggarwal/pymecht", - "url": "https://github.com/ankushaggarwal/pymecht", - "rel": "/software/repository/github/ankushaggarwal/pymecht", - "avatar": "https://avatars.githubusercontent.com/u/1700130?v=4", - "description": null, + "uid": "github/EbmeyerSt/GEnView", + "url": "https://github.com/EbmeyerSt/GEnView", + "rel": "/software/repository/github/EbmeyerSt/GEnView", + "avatar": "https://avatars.githubusercontent.com/u/11669686?v=4", + "description": "GEnView - A phylogeny based comparative genomics software to analyze the genetic environment of genes", "topics": [] }, { - "uid": "github/TNEL-UCSD/autolfads-deploy", - "url": "https://github.com/TNEL-UCSD/autolfads-deploy", - "rel": "/software/repository/github/TNEL-UCSD/autolfads-deploy", - "avatar": "https://avatars.githubusercontent.com/u/7026679?v=4", - "description": "Deployment strategies for AutoLFADS", + "uid": "github/kpenev/poet", + "url": "https://github.com/kpenev/poet", + "rel": "/software/repository/github/kpenev/poet", + "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", + "description": "Documentation at:", "topics": [] }, { - "uid": "github/RussellJurek/busy-function-fitting", - "url": "https://github.com/RussellJurek/busy-function-fitting", - "rel": "/software/repository/github/RussellJurek/busy-function-fitting", - "avatar": "https://avatars.githubusercontent.com/u/7555210?v=4", - "description": "A C/C++ library and Python module that allows users to fit the Busy Function (Westmeier, Jurek, Obreschkow, Koribalski & Staveley-Smith 2013) to data. Previously available at code.google.com/p/busy-function-fitting", + "uid": "github/kpenev/AutoWISP", + "url": "https://github.com/kpenev/AutoWISP", + "rel": "/software/repository/github/kpenev/AutoWISP", + "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", + "description": null, "topics": [] }, { - "uid": "github/MIAnalyzer/MIA", - "url": "https://github.com/MIAnalyzer/MIA", - "rel": "/software/repository/github/MIAnalyzer/MIA", - "avatar": "https://avatars.githubusercontent.com/u/96290353?v=4", - "description": "Microsopic Image Analyzer (MIA)", + "uid": "github/kpenev/AstroWISP", + "url": "https://github.com/kpenev/AstroWISP", + "rel": "/software/repository/github/kpenev/AstroWISP", + "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", + "description": null, "topics": [] }, { - "uid": "github/hongwanliu/DarkHistory", - "url": "https://github.com/hongwanliu/DarkHistory", - "rel": "/software/repository/github/hongwanliu/DarkHistory", - "avatar": "https://avatars.githubusercontent.com/u/17276243?v=4", - "description": "A code package for calculating modified cosmic ionization and thermal histories with dark matter and other exotic energy injections", + "uid": "github/BlauGroup/RNMC", + "url": "https://github.com/BlauGroup/RNMC", + "rel": "/software/repository/github/BlauGroup/RNMC", + "avatar": "https://avatars.githubusercontent.com/u/86630735?v=4", + "description": null, "topics": [] }, { - "uid": "github/genomicepidemiology/ARGprofiler", - "url": "https://github.com/genomicepidemiology/ARGprofiler", - "rel": "/software/repository/github/genomicepidemiology/ARGprofiler", - "avatar": "https://avatars.githubusercontent.com/u/8056318?v=4", - "description": "A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets", + "uid": "github/MultiQC/MultiQC", + "url": "https://github.com/MultiQC/MultiQC", + "rel": "/software/repository/github/MultiQC/MultiQC", + "avatar": "https://avatars.githubusercontent.com/u/18548644?v=4", + "description": "Aggregate results from bioinformatics analyses across many samples into a single report.", "topics": [ - "argprofiler" + "bioinformatics", + "analysis", + "pypi", + "bioconda", + "multiqc", + "python", + "data-visualization", + "quality-control", + "reporting", + "seqera", + "vizualisation" ] }, { - "uid": "github/brackham/speclib", - "url": "https://github.com/brackham/speclib", - "rel": "/software/repository/github/brackham/speclib", - "avatar": "https://avatars.githubusercontent.com/u/16804223?v=4", - "description": "Tools for working with stellar spectral libraries.", + "uid": "github/antonpannekoek/sunbather", + "url": "https://github.com/antonpannekoek/sunbather", + "rel": "/software/repository/github/antonpannekoek/sunbather", + "avatar": "https://avatars.githubusercontent.com/u/13951037?v=4", + "description": "Python/Cloudy package for simulating escaping exoplanet atmospheres and their transit spectra.", "topics": [] }, { - "uid": "github/adrn/schwimmbad", - "url": "https://github.com/adrn/schwimmbad", - "rel": "/software/repository/github/adrn/schwimmbad", - "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", - "description": "A common interface to processing pools.", - "topics": [ - "multiprocessing", - "mpi", - "parallel-computing" - ] + "uid": "github/ewatercycle/era5cli", + "url": "https://github.com/eWaterCycle/era5cli", + "rel": "/software/repository/github/ewatercycle/era5cli", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "Command Line Interface to download ERA5 from Copernicus Climate Data Service", + "topics": [] }, { - "uid": "github/adrn/pyia", - "url": "https://github.com/adrn/pyia", - "rel": "/software/repository/github/adrn/pyia", - "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", - "description": "a Python package for working with data from the Gaia mission", + "uid": "github/levuvietphong/pyTCR", + "url": "https://github.com/levuvietphong/pyTCR", + "rel": "/software/repository/github/levuvietphong/pyTCR", + "avatar": "https://avatars.githubusercontent.com/u/1987216?v=4", + "description": "A tropical cyclone rainfall model for python", "topics": [ - "gaia", - "astronomy", - "data-structures", - "python" + "climate", + "cyclone", + "modeling", + "rainfall" ] }, { - "uid": "github/adrn/SuperFreq", - "url": "https://github.com/adrn/SuperFreq", - "rel": "/software/repository/github/adrn/SuperFreq", - "avatar": "https://avatars.githubusercontent.com/u/583379?v=4", - "description": "Numerically determine the fundamental frequencies of an orbit", + "uid": "github/AlexMaraio/WeakLensingQML", + "url": "https://github.com/AlexMaraio/WeakLensingQML", + "rel": "/software/repository/github/AlexMaraio/WeakLensingQML", + "avatar": "https://avatars.githubusercontent.com/u/9391958?v=4", + "description": "Code applying the Quadratic Maximum Likelihood estimator to Weak Lensing", "topics": [] }, { - "uid": "github/ialopezt/GalLenspy", - "url": "https://github.com/ialopezt/GalLenspy", - "rel": "/software/repository/github/ialopezt/GalLenspy", - "avatar": "https://avatars.githubusercontent.com/u/32373393?v=4", - "description": "This is a open code whose purpose is the reconstruction of mass profile in disc-like galaxies from the gravitational lensing effect.", + "uid": "github/daniellefenech/SERPent", + "url": "https://github.com/daniellefenech/SERPent", + "rel": "/software/repository/github/daniellefenech/SERPent", + "avatar": "https://avatars.githubusercontent.com/u/9569819?v=4", + "description": "RFI mitigation software", "topics": [] }, { - "uid": "github/DeepMIALab/UC-NfNet", - "url": "https://github.com/DeepMIALab/UC-NfNet", - "rel": "/software/repository/github/DeepMIALab/UC-NfNet", - "avatar": "https://avatars.githubusercontent.com/u/82269830?v=4", + "uid": "github/UM-KevinHe/surtvep", + "url": "https://github.com/UM-KevinHe/surtvep", + "rel": "/software/repository/github/UM-KevinHe/surtvep", + "avatar": "https://avatars.githubusercontent.com/u/67330286?v=4", "description": null, "topics": [] }, { - "uid": "github/starkit/wsynphot", - "url": "https://github.com/starkit/wsynphot", - "rel": "/software/repository/github/starkit/wsynphot", - "avatar": "https://avatars.githubusercontent.com/u/34584369?v=4", - "description": "Synthetic Photometry package using Quantities", - "topics": [] - }, - { - "uid": "github/oorb/oorb", - "url": "https://github.com/oorb/oorb", - "rel": "/software/repository/github/oorb/oorb", - "avatar": "https://avatars.githubusercontent.com/u/12908237?v=4", - "description": "An open-source orbit-computation package for Solar System objects.", + "uid": "github/mrbell/fsclean", + "url": "https://github.com/mrbell/fsclean", + "rel": "/software/repository/github/mrbell/fsclean", + "avatar": "https://avatars.githubusercontent.com/u/2854337?v=4", + "description": "A Faraday synthesis application that performs 3D CLEAN deconvolution of multi-frequency, polarized radio interferometric data following Bell & En\u00dflin (2012).", "topics": [] }, { - "uid": "github/munich-quantum-toolkit/core", - "url": "https://github.com/munich-quantum-toolkit/core", - "rel": "/software/repository/github/munich-quantum-toolkit/core", - "avatar": "https://avatars.githubusercontent.com/u/177826161?v=4", - "description": "MQT Core - The Backbone of the Munich Quantum Toolkit", + "uid": "github/NeuralEnsemble/elephant", + "url": "https://github.com/NeuralEnsemble/elephant", + "rel": "/software/repository/github/NeuralEnsemble/elephant", + "avatar": "https://avatars3.githubusercontent.com/u/1540309?v=4", + "description": "Elephant is the Electrophysiology Analysis Toolkit", "topics": [ - "quantum-computing", - "quantum-intermediate-representation", - "mqt", - "tum" + "python", + "data-analysis", + "electrophysiology", + "neurophysiology", + "neuroscience", + "statistics", + "hacktoberfest" ] }, { - "uid": "github/evolbioinfo/bdei", - "url": "https://github.com/evolbioinfo/bdei", - "rel": "/software/repository/github/evolbioinfo/bdei", - "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", - "description": "Birth-Death Exposed-Infectious (BDEI) model parameter inference from phylogenetic trees", + "uid": "github/NeuralEnsemble/PyNN", + "url": "https://github.com/NeuralEnsemble/PyNN", + "rel": "/software/repository/github/NeuralEnsemble/PyNN", + "avatar": "https://avatars.githubusercontent.com/u/1540309?v=4", + "description": "A Python package for simulator-independent specification of neuronal network models.", "topics": [] }, { - "uid": "github/evolbioinfo/treesimulator", - "url": "https://github.com/evolbioinfo/treesimulator", - "rel": "/software/repository/github/evolbioinfo/treesimulator", - "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", - "description": null, - "topics": [] + "uid": "github/pikarpov-LANL/Sapsan", + "url": "https://github.com/pikarpov-LANL/Sapsan", + "rel": "/software/repository/github/pikarpov-LANL/Sapsan", + "avatar": "https://avatars.githubusercontent.com/u/57731529?v=4", + "description": "ML-based turbulence modeling for astrophysics", + "topics": [ + "turbulence", + "astrophysics", + "machine-learning" + ] }, { - "uid": "github/evolbioinfo/bdct", - "url": "https://github.com/evolbioinfo/bdct", - "rel": "/software/repository/github/evolbioinfo/bdct", - "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", - "description": "Birth-death epidemiological parameter estimator accounting for partner notification", - "topics": [] + "uid": "github/MNiwano/Eclaire", + "url": "https://github.com/MNiwano/Eclaire", + "rel": "/software/repository/github/MNiwano/Eclaire", + "avatar": "https://avatars.githubusercontent.com/u/50729838?v=4", + "description": "Python package using GPU via CUDA for astronomical image reduction", + "topics": [ + "python" + ] }, { - "uid": "github/evolbioinfo/bdpn", - "url": "https://github.com/evolbioinfo/bdpn", - "rel": "/software/repository/github/evolbioinfo/bdpn", - "avatar": "https://avatars.githubusercontent.com/u/25950370?v=4", - "description": "Birth-death epidemiological parameter estimator accounting for partner notification", + "uid": "github/cconroy20/alf", + "url": "https://github.com/cconroy20/alf", + "rel": "/software/repository/github/cconroy20/alf", + "avatar": "https://avatars.githubusercontent.com/u/7409786?v=4", + "description": "Absorption Line Fitter", "topics": [] }, { - "uid": "github/noatgnu/catapult", - "url": "https://github.com/noatgnu/catapult", - "rel": "/software/repository/github/noatgnu/catapult", - "avatar": "https://avatars.githubusercontent.com/u/16314099?v=4", - "description": "automated mass spec data search and analysis tool", + "uid": "github/cconroy20/fsps", + "url": "https://github.com/cconroy20/fsps", + "rel": "/software/repository/github/cconroy20/fsps", + "avatar": "https://avatars.githubusercontent.com/u/7409786?v=4", + "description": "Flexible Stellar Population Synthesis", "topics": [] }, { - "uid": "github/neuralgraphs/diman", - "url": "https://github.com/neuralgraphs/diman", - "rel": "/software/repository/github/neuralgraphs/diman", - "avatar": "https://avatars.githubusercontent.com/u/39004804?v=4", - "description": "A Clojure library for applying dimensional analysis.", + "uid": "github/ckay314/OSPREI", + "url": "https://github.com/ckay314/OSPREI", + "rel": "/software/repository/github/ckay314/OSPREI", + "avatar": "https://avatars.githubusercontent.com/u/32773545?v=4", + "description": "Fully coupled system of ForeCAT-based models", "topics": [] }, { - "uid": "github/jtksai/PyCOOL", - "url": "https://github.com/jtksai/PyCOOL", - "rel": "/software/repository/github/jtksai/PyCOOL", - "avatar": "https://avatars.githubusercontent.com/u/793635?v=4", - "description": "A fast object-oriented Python program that uses symplectic algorithms and GPU(s) to simulate scalar fields in the early universe", + "uid": "github/dartoon/galight", + "url": "https://github.com/dartoon/galight", + "rel": "/software/repository/github/dartoon/galight", + "avatar": "https://avatars.githubusercontent.com/u/12727027?v=4", + "description": "A python package that decompose the light into PSF and Sersic, fitting based on lenstronomy", "topics": [] }, { - "uid": "github/Theano/Theano", - "url": "https://github.com/Theano/Theano", - "rel": "/software/repository/github/Theano/Theano", - "avatar": "https://avatars2.githubusercontent.com/u/970517?v=4", - "description": "Theano is a Python library that allows you to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. It can use GPUs and perform efficient symbolic differentiation.", - "topics": [] + "uid": "github/jonzink/EDI_Vetter_unplugged", + "url": "https://github.com/jonzink/EDI_Vetter_unplugged", + "rel": "/software/repository/github/jonzink/EDI_Vetter_unplugged", + "avatar": "https://avatars.githubusercontent.com/u/44911960?v=4", + "description": "A compact version of EDI-Vetter, which uses the TLS output to quickly vet transit signals. All your favorite hits in a simplified format.", + "topics": [ + "vetting-metrics", + "python", + "tls", + "telescope", + "edi-vetter-unplugged", + "exoplanets", + "transit-data" + ] }, { - "uid": "github/levuvietphong/pyTCR", - "url": "https://github.com/levuvietphong/pyTCR", - "rel": "/software/repository/github/levuvietphong/pyTCR", - "avatar": "https://avatars.githubusercontent.com/u/1987216?v=4", - "description": "A tropical cyclone rainfall model for python", + "uid": "github/jonzink/EDI-Vetter", + "url": "https://github.com/jonzink/EDI-Vetter", + "rel": "/software/repository/github/jonzink/EDI-Vetter", + "avatar": "https://avatars.githubusercontent.com/u/44911960?v=4", + "description": "The (Exoplanet Detection Identifier) EDI-Vetter is the rock'n roll love child of Terra and RoboVetter, optimized to vet K2 transit signals.", "topics": [ - "climate", - "cyclone", - "modeling", - "rainfall" + "exoplanets", + "transits", + "k2-data-science", + "python" ] }, { - "uid": "github/christophuv/PeakBot_example", - "url": "https://github.com/christophuv/PeakBot_Example", - "rel": "/software/repository/github/christophuv/PeakBot_example", - "avatar": "https://avatars.githubusercontent.com/u/78472147?v=4", - "description": "Example scripts on how to use PeakBot", - "topics": [] + "uid": "github/Zstone19/pypetal", + "url": "https://github.com/Zstone19/pypetal", + "rel": "/software/repository/github/Zstone19/pypetal", + "avatar": "https://avatars.githubusercontent.com/u/61068045?v=4", + "description": "A pipeline for estimating AGN time lags", + "topics": [ + "agn", + "astronomy", + "drw", + "gaussian-processes", + "modeling", + "python", + "time-series", + "pipeline" + ] }, { - "uid": "github/jmd-dk/concept", - "url": "https://github.com/jmd-dk/concept", - "rel": "/software/repository/github/jmd-dk/concept", - "avatar": "https://avatars.githubusercontent.com/u/9202794?v=4", - "description": "COsmological N-body CodE in PyThon", + "uid": "github/voting-tools/pref_voting", + "url": "https://github.com/voting-tools/pref_voting", + "rel": "/software/repository/github/voting-tools/pref_voting", + "avatar": "https://avatars.githubusercontent.com/u/118827404?v=4", + "description": "pref_voting is a Python package that can be used to study and run elections with different preferential voting methods (graded voting methods and cardinal voting methods are also included for comparison). ", "topics": [ - "cosmology", - "nbody-simulation", - "python" + "computational-social-choice", + "preferences", + "preferential-voting", + "python3", + "research-tool", + "social-choice-theory", + "utility-functions", + "voting", + "voting-methods" ] }, { - "uid": "github/aasensio/molpop-cep", - "url": "https://github.com/aasensio/molpop-cep", - "rel": "/software/repository/github/aasensio/molpop-cep", - "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", - "description": "Molpop-cep", + "uid": "github/econ-ark/HARK", + "url": "https://github.com/econ-ark/HARK", + "rel": "/software/repository/github/econ-ark/HARK", + "avatar": "https://avatars2.githubusercontent.com/u/19330676?v=4", + "description": "Heterogenous Agents Resources & toolKit", "topics": [] }, { - "uid": "github/aasensio/sicon", - "url": "https://github.com/aasensio/sicon", - "rel": "/software/repository/github/aasensio/sicon", - "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", - "description": "Deep Learning Assisted Stokes Inversion", + "uid": "github/atakan/KeplerSolver", + "url": "https://github.com/atakan/KeplerSolver", + "rel": "/software/repository/github/atakan/KeplerSolver", + "avatar": "https://avatars.githubusercontent.com/u/655507?v=4", + "description": "A code for solving Kepler's equation, with arbitrary epoch.", "topics": [] }, { - "uid": "github/aasensio/torchmfbd", - "url": "https://github.com/aasensio/torchmfbd", - "rel": "/software/repository/github/aasensio/torchmfbd", - "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", - "description": null, + "uid": "github/smog-server/OpenSMOG", + "url": "https://github.com/smog-server/OpenSMOG", + "rel": "/software/repository/github/smog-server/OpenSMOG", + "avatar": "https://avatars.githubusercontent.com/u/88061180?v=4", + "description": "OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.", "topics": [] }, { - "uid": "github/aasensio/hazel", - "url": "https://github.com/aasensio/hazel", - "rel": "/software/repository/github/aasensio/hazel", - "avatar": "https://avatars.githubusercontent.com/u/1766597?v=4", - "description": "Hazel: synthesis and inversion of Stokes profiles", + "uid": "github/jessecambon/tidygeocoder", + "url": "https://github.com/jessecambon/tidygeocoder", + "rel": "/software/repository/github/jessecambon/tidygeocoder", + "avatar": "https://avatars.githubusercontent.com/u/31526206?v=4", + "description": "Geocoding Made Easy", + "topics": [ + "r", + "geocoding", + "tidyverse", + "rstats", + "rspatial" + ] + }, + { + "uid": "github/RBrearton/islatu", + "url": "https://github.com/RBrearton/islatu", + "rel": "/software/repository/github/RBrearton/islatu", + "avatar": "https://avatars.githubusercontent.com/u/82819976?v=4", + "description": "X-ray reflectometry reduction from Diamond Light Source", "topics": [] }, { - "uid": "github/cosimoNigro/agnpy", - "url": "https://github.com/cosimoNigro/agnpy", - "rel": "/software/repository/github/cosimoNigro/agnpy", - "avatar": "https://avatars.githubusercontent.com/u/26409711?v=4", - "description": "Modelling jetted Active Galactic Nuclei radiative processes with python", + "uid": "github/spokenlanguage/platalea", + "url": "https://github.com/spokenlanguage/platalea", + "rel": "/software/repository/github/spokenlanguage/platalea", + "avatar": "https://avatars.githubusercontent.com/u/61155109?v=4", + "description": "Library for training visually-grounded models of spoken language understanding.", "topics": [ - "leptonic", - "radiative-processes", - "agn", - "numpy", - "astropy", - "python", - "jets", - "blazar" + "visually-grounded-speech", + "multi-tasking", + "spoken-language-understanding", + "deep-neural-networks", + "speech-processing", + "weakly-supervised-learning", + "multimodal-learning", + "pytorch", + "flickr8k", + "spokencoco" ] }, { - "uid": "github/natashabatalha/picaso", - "url": "https://github.com/natashabatalha/picaso", - "rel": "/software/repository/github/natashabatalha/picaso", - "avatar": "https://avatars.githubusercontent.com/u/6554465?v=4", - "description": "A Planetary Intensity Code for Atmospheric Spectroscopy Observations", + "uid": "github/OpenWaterAnalytics/EPyT", + "url": "https://github.com/OpenWaterAnalytics/EPyT", + "rel": "/software/repository/github/OpenWaterAnalytics/EPyT", + "avatar": "https://avatars.githubusercontent.com/u/2392819?v=4", + "description": "EPyT: An EPANET-Python Toolkit for Smart Water Network Simulations", "topics": [ - "exoplanets", - "atmospheric-science", - "planetary-science", - "scattering", - "atmospheres", - "direct-imaging", - "transmission", - "emission", - "reflected-light" + "epanet", + "epanet-matlab-toolkit", + "network", + "python", + "simulation", + "water", + "epanet-python-toolkit" ] }, { - "uid": "github/natashabatalha/PandExo", - "url": "https://github.com/natashabatalha/PandExo", - "rel": "/software/repository/github/natashabatalha/PandExo", - "avatar": "https://avatars.githubusercontent.com/u/6554465?v=4", - "description": "A Community Tool for Transiting Exoplanet Science with the JWST & HST", + "uid": "github/OpenWaterAnalytics/pyswmm", + "url": "https://github.com/OpenWaterAnalytics/pyswmm", + "rel": "/software/repository/github/OpenWaterAnalytics/pyswmm", + "avatar": "https://avatars0.githubusercontent.com/u/2392819?v=4", + "description": "Python Wrappers for SWMM", "topics": [ - "exoplanets", - "exoplanet-transits", - "jwst", - "spectroscopy", - "binning", - "stsci", - "hst", - "simulator", - "astronomy", - "astrophysics" + "swmm5", + "hydraulic-modeling", + "stormwater", + "hydrology-stormwater-analysis", + "python", + "swmm" ] }, { - "uid": "github/andresGranadosC/GalRotpy", - "url": "https://github.com/andresGranadosC/GalRotpy", - "rel": "/software/repository/github/andresGranadosC/GalRotpy", - "avatar": "https://avatars.githubusercontent.com/u/24868453?v=4", - "description": "A Python-based tool to parametrize the rotation curve and the gravitational potential of disk-like galaxies", + "uid": "github/sanjibs/bmcmc", + "url": "https://github.com/sanjibs/bmcmc", + "rel": "/software/repository/github/sanjibs/bmcmc", + "avatar": "https://avatars.githubusercontent.com/u/1036754?v=4", + "description": "MCMC package for Bayesian data analysis", "topics": [] }, { - "uid": "github/samb8s/PsrPopPy", - "url": "https://github.com/samb8s/PsrPopPy", - "rel": "/software/repository/github/samb8s/PsrPopPy", - "avatar": "https://avatars.githubusercontent.com/u/122250?v=4", - "description": "Python implementation of PSRPOP, designed to be run from the command line or from Python scripts/interpreter", + "uid": "github/alejostark/phase_space_cosmo_fisher", + "url": "https://github.com/alejostark/phase_space_cosmo_fisher", + "rel": "/software/repository/github/alejostark/phase_space_cosmo_fisher", + "avatar": "https://avatars.githubusercontent.com/u/5475327?v=4", + "description": "Code used to produce Fisher matrix contours in Stark, Miller Huterer 2016", + "topics": [] + }, + { + "uid": "github/kegiljarhus/pyBEMT", + "url": "https://github.com/kegiljarhus/pyBEMT", + "rel": "/software/repository/github/kegiljarhus/pyBEMT", + "avatar": "https://avatars3.githubusercontent.com/u/19799448?v=4", + "description": "Implementation of the Blade Element Momentum Theory for turbines and propellers in Python", "topics": [] }, { - "uid": "github/molscat/molscat", - "url": "https://github.com/molscat/molscat", - "rel": "/software/repository/github/molscat/molscat", - "avatar": "https://avatars.githubusercontent.com/u/44835777?v=4", - "description": null, + "uid": "github/ymaan4/rficlean", + "url": "https://github.com/ymaan4/RFIClean", + "rel": "/software/repository/github/ymaan4/rficlean", + "avatar": "https://avatars.githubusercontent.com/u/7300480?v=4", + "description": "Mitigation of periodic as well as narrow-band and spiky/bursty RFI from time-domain filterbank data.", + "topics": [ + "rfi", + "filterbank-data", + "spiky", + "interference", + "interference-identification", + "interference-mitigation", + "interference-detection", + "interference-cancellation", + "pulsar", + "pulsars", + "fast-radio-bursts", + "neutron-star", + "time-domain-astronomy" + ] + }, + { + "uid": "github/rhpvorderman/sequali", + "url": "https://github.com/rhpvorderman/sequali", + "rel": "/software/repository/github/rhpvorderman/sequali", + "avatar": "https://avatars.githubusercontent.com/u/26142226?v=4", + "description": "Fast sequencing data quality metrics", + "topics": [ + "bam", + "fastq", + "illumina", + "nanopore", + "qc", + "quality-control" + ] + }, + { + "uid": "github/AliYoussef96/parazitCUB", + "url": "https://github.com/AliYoussef96/parazitCUB", + "rel": "/software/repository/github/AliYoussef96/parazitCUB", + "avatar": "https://avatars.githubusercontent.com/u/42375503?v=4", + "description": "parazitCUB streamlines the process of investigating the adaptations of parasites' Codon Usage Bias (CUB) within the R environment", "topics": [] }, { - "uid": "github/christophmschaefer/miluphcuda", - "url": "https://github.com/christophmschaefer/miluphcuda", - "rel": "/software/repository/github/christophmschaefer/miluphcuda", - "avatar": "https://avatars.githubusercontent.com/u/52719134?v=4", - "description": "smooth particle hydrodynamics code", + "uid": "github/nextstrain/auspice", + "url": "https://github.com/nextstrain/auspice", + "rel": "/software/repository/github/nextstrain/auspice", + "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", + "description": "Web app for visualizing pathogen evolution", "topics": [] }, { - "uid": "github/debbiemarkslab/plmc", - "url": "https://github.com/debbiemarkslab/plmc", - "rel": "/software/repository/github/debbiemarkslab/plmc", - "avatar": "https://avatars.githubusercontent.com/u/8976419?v=4", - "description": "Inference of couplings in proteins and RNAs from sequence variation", + "uid": "github/nextstrain/nextclade", + "url": "https://github.com/nextstrain/nextclade", + "rel": "/software/repository/github/nextstrain/nextclade", + "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", + "description": "Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement", "topics": [ - "protein-sequences", - "sequence-alignments", - "undirected-graphs", - "protein-structure", - "protein-interaction" + "clade", + "clades", + "coronavirus", + "covid", + "covid-19", + "dna", + "ncov", + "neherlab", + "nextstrain", + "research", + "rna", + "sars-cov-2", + "science", + "sequences", + "sequencing", + "strain", + "virus", + "covid19", + "next-generation-sequencing", + "influenza" ] }, { - "uid": "github/healpy/healpy", - "url": "https://github.com/healpy/healpy", - "rel": "/software/repository/github/healpy/healpy", - "avatar": "https://avatars.githubusercontent.com/u/897950?v=4", - "description": "Python healpix maps tools", - "topics": [] - }, - { - "uid": "github/nilearn/nilearnhub.io", - "url": null, - "rel": "/software/repository/github/nilearn/nilearnhub.io", - "avatar": "", - "description": "a Python module for fast and easy statistical learning on NeuroImaging data.\r\rIt leverages the scikit-learn Python toolbox for multivariate statistics with applications such as predictive modelling, classification, decoding, or connectivity analysis.", + "uid": "github/nextstrain/augur", + "url": "https://github.com/nextstrain/augur", + "rel": "/software/repository/github/nextstrain/augur", + "avatar": "https://avatars.githubusercontent.com/u/22159334?v=4", + "description": "Pipeline components for real-time phylodynamic analysis", "topics": [] }, { - "uid": "github/EskelandLab/ShinyArchRUiO", - "url": "https://github.com/EskelandLab/ShinyArchRUiO", - "rel": "/software/repository/github/EskelandLab/ShinyArchRUiO", - "avatar": "https://avatars.githubusercontent.com/u/84804829?v=4", - "description": null, + "uid": "github/N-BodyShop/smooth", + "url": "https://github.com/N-BodyShop/smooth", + "rel": "/software/repository/github/N-BodyShop/smooth", + "avatar": "https://avatars.githubusercontent.com/u/6473052?v=4", + "description": "A Smoothing Program for N-body Simulations", "topics": [] }, { - "uid": "github/OwenWard/ppdiag", - "url": "https://github.com/OwenWard/ppdiag", - "rel": "/software/repository/github/OwenWard/ppdiag", - "avatar": "https://avatars.githubusercontent.com/u/33092609?v=4", - "description": null, + "uid": "github/N-BodyShop/fof", + "url": "https://github.com/N-BodyShop/fof", + "rel": "/software/repository/github/N-BodyShop/fof", + "avatar": "https://avatars.githubusercontent.com/u/6473052?v=4", + "description": "Friends of Friends halo finder", "topics": [] }, { - "uid": "github/dnonatar/Sequoia", - "url": "https://github.com/dnonatar/Sequoia", - "rel": "/software/repository/github/dnonatar/Sequoia", - "avatar": "https://avatars.githubusercontent.com/u/19934223?v=4", + "uid": "github/justinread/gravsphere", + "url": "https://github.com/justinread/gravsphere", + "rel": "/software/repository/github/justinread/gravsphere", + "avatar": "https://avatars.githubusercontent.com/u/3018208?v=4", "description": null, "topics": [] }, { - "uid": "github/ablab/TandemTools", - "url": "https://github.com/ablab/TandemTools", - "rel": "/software/repository/github/ablab/TandemTools", - "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", - "description": "Tool for assessing/improving assembly quality in extra-long tandem repeats", + "uid": "github/dtamayo/reboundx", + "url": "https://github.com/dtamayo/reboundx", + "rel": "/software/repository/github/dtamayo/reboundx", + "avatar": "https://avatars.githubusercontent.com/u/3408023?v=4", + "description": "A library for adding additional forces to the REBOUND N-body integration package", "topics": [] }, { - "uid": "github/ablab/nerpa", - "url": "https://github.com/ablab/nerpa", - "rel": "/software/repository/github/ablab/nerpa", - "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", - "description": null, - "topics": [] + "uid": "github/scverse/muon", + "url": "https://github.com/scverse/muon", + "rel": "/software/repository/github/scverse/muon", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "muon is a multimodal omics Python framework", + "topics": [ + "multimodal-data", + "multimodal-omics-analysis", + "multi-omics", + "anndata", + "scanpy", + "mudata", + "muon", + "scrna-seq", + "scatac-seq", + "cite-seq", + "scverse" + ] }, { - "uid": "github/ablab/spades", - "url": "https://github.com/ablab/spades", - "rel": "/software/repository/github/ablab/spades", - "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", - "description": "SPAdes Genome Assembler", + "uid": "github/scverse/scanpy", + "url": "https://github.com/scverse/scanpy", + "rel": "/software/repository/github/scverse/scanpy", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "Single-cell analysis in Python. Scales to >100M cells.", "topics": [ - "genome-assembly", - "sequence-assembler", - "sequencing", - "transcriptome-assembly", - "illumina", - "metagenome-assembly", - "next-generation-sequencing" + "machine-learning", + "data-science", + "visualize-data", + "transcriptomics", + "bioinformatics", + "scanpy", + "anndata", + "python", + "scverse" ] }, { - "uid": "github/ablab/quast", - "url": "https://github.com/ablab/quast", - "rel": "/software/repository/github/ablab/quast", - "avatar": "https://avatars.githubusercontent.com/u/988606?v=4", - "description": "Genome assembly evaluation tool", + "uid": "github/scverse/anndata", + "url": "https://github.com/scverse/anndata", + "rel": "/software/repository/github/scverse/anndata", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "Annotated data.", "topics": [ + "scanpy", + "data-science", + "transcriptomics", "bioinformatics", - "genome-assembly-evaluation", - "visualization", - "contigs" + "machine-learning", + "scverse", + "anndata" ] }, { - "uid": "github/SebOliver/PCA", - "url": "https://github.com/SebOliver/PCA", - "rel": "/software/repository/github/SebOliver/PCA", - "avatar": "https://avatars.githubusercontent.com/u/8169971?v=4", - "description": "The folders in this file are those discussed in the paper: \"Principal Component Analysis and Radiative Transfer modelling of Spitzer IRS Spectra of Ultra Luminous Infrared Galaxies \" Hurley et al. 2012 Monthly Notices of the Royal Astronomical Society, 424 (3). pp. 2069-2078. ISSN 0035-8711 ", + "uid": "github/kinleyid/tempodisco", + "url": "https://github.com/kinleyid/tempodisco", + "rel": "/software/repository/github/kinleyid/tempodisco", + "avatar": "https://avatars.githubusercontent.com/u/18541620?v=4", + "description": "An R package for temporal discounting", "topics": [] }, { - "uid": "github/cnes/EleFits", - "url": "https://github.com/CNES/EleFits", - "rel": "/software/repository/github/cnes/EleFits", - "avatar": "https://avatars.githubusercontent.com/u/30655936?v=4", - "description": "A modern C++ API on top of CFitsIO", + "uid": "github/Fermipy/fermipy", + "url": "https://github.com/fermiPy/fermipy", + "rel": "/software/repository/github/Fermipy/fermipy", + "avatar": "https://avatars.githubusercontent.com/u/10644247?v=4", + "description": "Fermi-LAT Python Analysis Framework", + "topics": [] + }, + { + "uid": "github/BenNordick/HiLoop", + "url": "https://github.com/BenNordick/HiLoop", + "rel": "/software/repository/github/BenNordick/HiLoop", + "avatar": "https://avatars.githubusercontent.com/u/38300205?v=4", + "description": null, "topics": [ - "actively-maintained", - "fits-files", - "fitsio", - "cpp" + "network-analysis", + "bioinformatics", + "enrichment-analysis" ] }, { - "uid": "github/xragua/xraybinaryorbit", - "url": "https://github.com/xragua/xraybinaryorbit", - "rel": "/software/repository/github/xragua/xraybinaryorbit", - "avatar": "https://avatars.githubusercontent.com/u/152065965?v=4", - "description": " A Python Package for Analyzing Orbital Modulations in X-ray Binaries", + "uid": "github/keck-datareductionpipelines/MosfireDRP", + "url": "https://github.com/Keck-DataReductionPipelines/MosfireDRP", + "rel": "/software/repository/github/keck-datareductionpipelines/MosfireDRP", + "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/panoptes/POCS", + "url": "https://github.com/panoptes/POCS", + "rel": "/software/repository/github/panoptes/POCS", + "avatar": "https://avatars.githubusercontent.com/u/5598632?v=4", + "description": "An Observatory Control System for the PANOPTES citizen-science project designed to help find transiting exoplanets! :telescope: :stars:", "topics": [ - "orbital-mechanics", - "x-ray-binaries", - "astrophysics" + "exoplantes", + "astronomy", + "telescopes", + "python", + "panoptes", + "citizen-science" ] }, { - "uid": "github/nand1155/CausNet", - "url": "https://github.com/nand1155/CausNet", - "rel": "/software/repository/github/nand1155/CausNet", - "avatar": "https://avatars.githubusercontent.com/u/109425599?v=4", - "description": "Generational orderings based search for optimal Bayesian networks via dynamic programming with parent set constraints", + "uid": "github/GBLille/MassiveFold", + "url": "https://github.com/GBLille/MassiveFold", + "rel": "/software/repository/github/GBLille/MassiveFold", + "avatar": "https://avatars.githubusercontent.com/u/51077128?v=4", + "description": null, "topics": [] }, { - "uid": "github/CDSP-SCPO/metadata-middleware", - "url": "https://github.com/CDSP-SCPO/metadata-middleware", - "rel": "/software/repository/github/CDSP-SCPO/metadata-middleware", - "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", + "uid": "github/ZhenjiangFan/DAG-deepVASE", + "url": "https://github.com/ZhenjiangFan/DAG-deepVASE", + "rel": "/software/repository/github/ZhenjiangFan/DAG-deepVASE", + "avatar": "https://avatars.githubusercontent.com/u/21962827?v=4", "description": null, "topics": [] }, { - "uid": "github/CDSP-SCPO/WPSS-for-ESS-webpanel", - "url": "https://github.com/CDSP-SCPO/WPSS-for-ESS-webpanel", - "rel": "/software/repository/github/CDSP-SCPO/WPSS-for-ESS-webpanel", - "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", - "description": null, + "uid": "github/LINNAE-project/SFB-Annotator", + "url": "https://github.com/LINNAE-project/SFB-Annotator", + "rel": "/software/repository/github/LINNAE-project/SFB-Annotator", + "avatar": "https://avatars.githubusercontent.com/u/65170433?v=4", + "description": "This web app is intended for demo purposes only!", "topics": [] }, { - "uid": "github/CDSP-SCPO/dataverse-feed", - "url": "https://github.com/CDSP-SCPO/dataverse-feed", - "rel": "/software/repository/github/CDSP-SCPO/dataverse-feed", - "avatar": "https://avatars.githubusercontent.com/u/32896728?v=4", - "description": "Embed a feed of your Dataverse items (collections, datasets, files) in your webpage using the Dataverse search API. JavaScript module built with Svelte and Snowpack.", + "uid": "github/bsafdi/stellarWakes", + "url": "https://github.com/bsafdi/stellarWakes", + "rel": "/software/repository/github/bsafdi/stellarWakes", + "avatar": "https://avatars.githubusercontent.com/u/11068813?v=4", + "description": "Python package for dark matter subhalo searches using stellar kinematic data", + "topics": [] + }, + { + "uid": "github/HEML/HEML", + "url": "https://github.com/HEML/HEML", + "rel": "/software/repository/github/HEML/HEML", + "avatar": "https://avatars2.githubusercontent.com/u/15981568?v=4", + "description": "Open Source v1 for the Hyper-Elastic Mass Links (HEML) software", + "topics": [] + }, + { + "uid": "github/bwvdnbro/HydroCode1D", + "url": "https://github.com/bwvdnbro/HydroCode1D", + "rel": "/software/repository/github/bwvdnbro/HydroCode1D", + "avatar": "https://avatars.githubusercontent.com/u/7336967?v=4", + "description": "Basic 1D finite volume code that can handle pure 1D problems and problems with 2D and 3D spherical symmetry.", + "topics": [] + }, + { + "uid": "github/bwvdnbro/CMacIonize", + "url": "https://github.com/bwvdnbro/CMacIonize", + "rel": "/software/repository/github/bwvdnbro/CMacIonize", + "avatar": "https://avatars.githubusercontent.com/u/7336967?v=4", + "description": "C++ Monte Carlo photoionization and radiation hydrodynamics code.", "topics": [ - "rdm", - "repository", - "research", - "data", - "javascript", - "dataverse", - "integration", - "api", - "svelte" + "simulation", + "radiative-transfer", + "hydrodynamics", + "post-processing" ] }, { - "uid": "github/KopalliV/Benchmarking_graph_pipelines", - "url": "https://github.com/KopalliV/Benchmarking_graph_pipelines", - "rel": "/software/repository/github/KopalliV/Benchmarking_graph_pipelines", - "avatar": "https://avatars.githubusercontent.com/u/136314523?v=4", - "description": null, + "uid": "github/iontorrent/TS", + "url": "https://github.com/iontorrent/TS", + "rel": "/software/repository/github/iontorrent/TS", + "avatar": "https://avatars.githubusercontent.com/u/1327981?v=4", + "description": "Torrent Suite", "topics": [] }, { - "uid": "github/n8thangreen/BCEA", - "url": "https://github.com/n8thangreen/BCEA", - "rel": "/software/repository/github/n8thangreen/BCEA", - "avatar": "https://avatars.githubusercontent.com/u/3061918?v=4", - "description": "Bayesian Cost Effectiveness Analysis. Given the results of a Bayesian model (possibly based on MCMC) in the form of simulations from the posterior distributions of suitable variables of costs and clinical benefits for two or more interventions, produces a health economic evaluation. Compares one of the interventions (the \"reference\") to the others (\"comparators\"). Produces many summary and plots to analyse the results", + "uid": "github/mantzaris/LMDiskANN.jl", + "url": "https://github.com/mantzaris/LMDiskANN.jl", + "rel": "/software/repository/github/mantzaris/LMDiskANN.jl", + "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", + "description": "Julia Implementation of Low Memory Disk ANN (LM-DiskANN)", "topics": [ - "cost-effectiveness", - "bayesian" + "approximate-nearest-neighbor-search", + "diskann", + "julia", + "julialang", + "vector-database" ] }, { - "uid": "github/elliohow/fMRI_ROI_Analysis_Tool", - "url": "https://github.com/elliohow/fMRI_ROI_Analysis_Tool", - "rel": "/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", - "avatar": "https://avatars.githubusercontent.com/u/47447365?v=4", - "description": "An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.", + "uid": "github/mantzaris/BenchmarkDataNLP.jl", + "url": "https://github.com/mantzaris/BenchmarkDataNLP.jl", + "rel": "/software/repository/github/mantzaris/BenchmarkDataNLP.jl", + "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", + "description": "Generate synthetic text from a variety of methods, eg. Context Free Grammars (CFGs), with parameterized complexity to test your NLP methods (like LLMs)", "topics": [ - "fmri", - "fmri-preprocessing", - "python", - "neuroimaging", - "brain-imaging", - "fmri-roi-analysis" + "corpus-data", + "data-generation", + "data-generator", + "llm-training", + "nlp" ] }, { - "uid": "github/big-data-lab-team/spot", - "url": "https://github.com/big-data-lab-team/spot", - "rel": "/software/repository/github/big-data-lab-team/spot", - "avatar": "https://avatars0.githubusercontent.com/u/22078250?v=4", - "description": "A set of tools to evaluate the reproducibility of computations", + "uid": "github/mantzaris/WunDeeDB.jl", + "url": "https://github.com/mantzaris/WunDeeDB.jl", + "rel": "/software/repository/github/mantzaris/WunDeeDB.jl", + "avatar": "https://avatars.githubusercontent.com/u/11978807?v=4", + "description": "Your just-works / zero-config / embedded / WAL: vector database", + "topics": [ + "embedded", + "julia", + "julialang", + "vector-database" + ] + }, + { + "uid": "github/fkoehlin/montepython_2cosmos_public", + "url": "https://github.com/fkoehlin/montepython_2cosmos_public", + "rel": "/software/repository/github/fkoehlin/montepython_2cosmos_public", + "avatar": "https://avatars.githubusercontent.com/u/11902084?v=4", + "description": "Public repository for the Monte Python Code modified to work with two independent cosmological parameter sets and independent cosmological calculations per likelihood.", "topics": [] }, { - "uid": "github/hannorein/rebound", - "url": "https://github.com/hannorein/rebound", - "rel": "/software/repository/github/hannorein/rebound", - "avatar": "https://avatars.githubusercontent.com/u/53376?v=4", - "description": "\ud83d\udcab An open-source multi-purpose N-body code.", + "uid": "github/cvs-health/langfair", + "url": "https://github.com/cvs-health/langfair", + "rel": "/software/repository/github/cvs-health/langfair", + "avatar": "https://avatars.githubusercontent.com/u/89528242?v=4", + "description": "LangFair is a Python library for conducting use-case level LLM bias and fairness assessments", "topics": [ - "astrophysics", - "n-body", - "planetary-science", - "symplectic-integrator" + "ai", + "artificial-intelligence", + "bias", + "bias-detection", + "ethical-ai", + "fairness", + "fairness-ai", + "fairness-ml", + "fairness-testing", + "large-language-models", + "llm", + "responsible-ai", + "python", + "ai-safety", + "llm-evaluation", + "llm-evaluation-framework", + "llm-evaluation-metrics" ] }, { - "uid": "github/natir/vcf2parquet", - "url": "https://github.com/natir/vcf2parquet", - "rel": "/software/repository/github/natir/vcf2parquet", - "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", - "description": "Convert vcf in parquet ", + "uid": "github/sisl/PyroRL", + "url": "https://github.com/sisl/PyroRL", + "rel": "/software/repository/github/sisl/PyroRL", + "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", + "description": "An RL environment made for wildfire evacuation.", "topics": [] }, { - "uid": "github/natir/yacrd", - "url": "https://github.com/natir/yacrd", - "rel": "/software/repository/github/natir/yacrd", - "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", - "description": "Yet Another Chimeric Read Detector", + "uid": "github/sisl/ExpFamilyPCA.jl", + "url": "https://github.com/sisl/ExpFamilyPCA.jl", + "rel": "/software/repository/github/sisl/ExpFamilyPCA.jl", + "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", + "description": "A Julia package for exponential family principal component analysis (EPCA).", "topics": [ - "bioinformatics", - "long-reads", - "sequence", - "chimera" + "dimensionality-reduction", + "exponential-family", + "julia", + "machine-learning", + "pca", + "principal-component-analysis", + "compression", + "epca", + "compression-algorithm", + "denoising", + "interpretability", + "reinforcement-learning", + "signal-processing" ] }, { - "uid": "github/natir/rustyread", - "url": "https://github.com/natir/rustyread", - "rel": "/software/repository/github/natir/rustyread", - "avatar": "https://avatars.githubusercontent.com/u/3991375?v=4", - "description": "A long read simulator based on badread idea", + "uid": "github/sisl/POMDPStressTesting.jl", + "url": "https://github.com/sisl/POMDPStressTesting.jl", + "rel": "/software/repository/github/sisl/POMDPStressTesting.jl", + "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", + "description": "Adaptive stress testing of black-box systems within POMDPs.jl", "topics": [ - "bioinformatics", - "long-reads" + "stress-test", + "simulation", + "solvers", + "pomdps", + "black-box" ] }, { - "uid": "github/ernewton/tellrv", - "url": "https://github.com/ernewton/tellrv", - "rel": "/software/repository/github/ernewton/tellrv", - "avatar": "https://avatars.githubusercontent.com/u/4790228?v=4", - "description": "Radial velocities for low-resolution NIR spectra using telluric features to provide absolute wavelength calibration", - "topics": [] - }, - { - "uid": "github/mofanv/darknetz", - "url": "https://github.com/mofanv/darknetz", - "rel": "/software/repository/github/mofanv/darknetz", - "avatar": "https://avatars.githubusercontent.com/u/23327428?v=4", - "description": "runs several layers of a deep learning model in TrustZone", + "uid": "github/signalling-games-org/evoke", + "url": "https://github.com/signalling-games-org/evoke", + "rel": "/software/repository/github/signalling-games-org/evoke", + "avatar": "https://avatars.githubusercontent.com/u/124157910?v=4", + "description": "A Python package for evolutionary signalling games", "topics": [] }, { - "uid": "github/Oftatkofta/cellocity", - "url": "https://github.com/Oftatkofta/cellocity", - "rel": "/software/repository/github/Oftatkofta/cellocity", - "avatar": "https://avatars.githubusercontent.com/u/6969742?v=4", - "description": "Scientific software for analysis of confluent cell dynamics.", - "topics": [ - "microscopy", - "time-series-analysis", - "analysis", - "vector-analysis", - "microscopy-data", - "cell-dynamics" - ] + "uid": "github/trinityrnaseq/wiki", + "url": null, + "rel": "/software/repository/github/trinityrnaseq/wiki", + "avatar": "", + "description": "a software package comprised of three independent software modules (Inchworm, Chrysalis, and Butterfly) for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data.", + "topics": [] }, { - "uid": "github/savage13/sacio", - "url": "https://github.com/savage13/sacio", - "rel": "/software/repository/github/savage13/sacio", - "avatar": "https://avatars.githubusercontent.com/u/126514?v=4", - "description": "sacio library", + "uid": "github/anddssan/CLOUDe", + "url": "https://github.com/anddssan/CLOUDe", + "rel": "/software/repository/github/anddssan/CLOUDe", + "avatar": "https://avatars.githubusercontent.com/u/19232027?v=4", + "description": "CLOUDe is an R implementation of Campelo dos Santos, DeGiorgio and Assis' (2023) suite of machine learning methods for predicting evolutionary targets of gene deletion events from expression data in two species.", + "topics": [] + }, + { + "uid": "github/VirtualPlantLab/PlantSimEngine.jl", + "url": "https://github.com/VirtualPlantLab/PlantSimEngine.jl", + "rel": "/software/repository/github/VirtualPlantLab/PlantSimEngine.jl", + "avatar": "https://avatars.githubusercontent.com/u/130992956?v=4", + "description": "A simulation engine for models related to plants", "topics": [ - "sac", - "iris", - "sacio-library", - "seismic" + "crops", + "fspm", + "julia", + "julialang", + "modeling", + "plants", + "simulation" ] }, { - "uid": "github/dcouvin/CRISPRCasFinder", - "url": "https://github.com/dcouvin/CRISPRCasFinder", - "rel": "/software/repository/github/dcouvin/CRISPRCasFinder", - "avatar": "https://avatars.githubusercontent.com/u/12830930?v=4", - "description": "A Perl script allowing to identify CRISPR arrays and associated Cas proteins from DNA sequences", + "uid": "github/xxsds/DYNAMIC", + "url": "https://github.com/xxsds/DYNAMIC", + "rel": "/software/repository/github/xxsds/DYNAMIC", + "avatar": "https://avatars.githubusercontent.com/u/17567160?v=4", + "description": "Dynamic succinct/compressed data structures", "topics": [] }, { - "uid": "github/simpeg/aurora", - "url": "https://github.com/simpeg/aurora", - "rel": "/software/repository/github/simpeg/aurora", - "avatar": "https://avatars.githubusercontent.com/u/6043842?v=4", - "description": "software for processing natural source electromagnetic data ", + "uid": "github/etiennepayet/nti", + "url": "https://github.com/etiennepayet/nti", + "rel": "/software/repository/github/etiennepayet/nti", + "avatar": "https://avatars.githubusercontent.com/u/4244570?v=4", + "description": null, "topics": [] }, { - "uid": "github/MiguelEA/nudec_BSM", - "url": "https://github.com/MiguelEA/nudec_BSM", - "rel": "/software/repository/github/MiguelEA/nudec_BSM", - "avatar": "https://avatars.githubusercontent.com/u/22373656?v=4", - "description": "Neutrino Decoupling Beyond the Standard Model", + "uid": "github/philip-long/robot_collision_checking", + "url": "https://github.com/philip-long/robot_collision_checking", + "rel": "/software/repository/github/philip-long/robot_collision_checking", + "avatar": "https://avatars.githubusercontent.com/u/12842810?v=4", + "description": "A ROS interface to FCL collision checking", "topics": [] }, { - "uid": "github/clwainwright/CosmoTransitions", - "url": "https://github.com/clwainwright/CosmoTransitions", - "rel": "/software/repository/github/clwainwright/CosmoTransitions", - "avatar": "https://avatars.githubusercontent.com/u/6962678?v=4", - "description": "A package for analyzing finite or zero-temperature cosmological phase transitions driven by single or multiple scalar fields.", + "uid": "github/philip-long/constrained_manipulability", + "url": "https://github.com/philip-long/constrained_manipulability", + "rel": "/software/repository/github/philip-long/constrained_manipulability", + "avatar": "https://avatars.githubusercontent.com/u/12842810?v=4", + "description": "Constrained Manipulability is a library used to compute and visualize a robot's capacities in constrained environments. ", "topics": [] }, { - "uid": "github/andymummeryastro/tidalspin", - "url": "https://github.com/andymummeryastro/tidalspin", - "rel": "/software/repository/github/andymummeryastro/tidalspin", - "avatar": "https://avatars.githubusercontent.com/u/87980281?v=4", - "description": "Python package for constraining black hole spins using the properties of relativistic tidal forces", + "uid": "github/parallelwindfarms/byteparsing", + "url": "https://github.com/parallelwindfarms/byteparsing", + "rel": "/software/repository/github/parallelwindfarms/byteparsing", + "avatar": "https://avatars.githubusercontent.com/u/45036415?v=4", + "description": "Parser for mixed binary/ASCII data in Python", "topics": [] }, { - "uid": "github/cgrudz/DataAssimilationBenchmarks.jl", - "url": "https://github.com/cgrudz/DataAssimilationBenchmarks.jl", - "rel": "/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", - "avatar": "https://avatars.githubusercontent.com/u/7243670?v=4", - "description": "Package Information and Documentation", + "uid": "github/kuanrongchan/COVID19-severity", + "url": "https://github.com/kuanrongchan/COVID19-severity", + "rel": "/software/repository/github/kuanrongchan/COVID19-severity", + "avatar": "https://avatars.githubusercontent.com/u/91276553?v=4", + "description": null, "topics": [] }, { - "uid": "github/langfzac/Photodynamics.jl", - "url": "https://github.com/langfzac/Photodynamics.jl", - "rel": "/software/repository/github/langfzac/Photodynamics.jl", - "avatar": "https://avatars.githubusercontent.com/u/37716146?v=4", - "description": "Differentiable transit light curves", - "topics": [] + "uid": "github/equib/equib", + "url": "https://github.com/equib/EQUIB", + "rel": "/software/repository/github/equib/equib", + "avatar": "https://avatars.githubusercontent.com/u/24842786?v=4", + "description": "EQUIB - Fortran Program for Equilibrium Atomic Populations and Line Emissivities", + "topics": [ + "atomic-level-populations", + "line-emissivities", + "statistical-equilibrium", + "equib", + "fortran", + "electron-density", + "electron-temperature" + ] }, { - "uid": "github/maxpumperla/hyperas", - "url": "https://github.com/maxpumperla/hyperas", - "rel": "/software/repository/github/maxpumperla/hyperas", - "avatar": "https://avatars.githubusercontent.com/u/3462566?v=4", - "description": "Keras + Hyperopt: A very simple wrapper for convenient hyperparameter optimization", + "uid": "github/equib/pyEQUIB", + "url": "https://github.com/equib/pyEQUIB", + "rel": "/software/repository/github/equib/pyEQUIB", + "avatar": "https://avatars3.githubusercontent.com/u/24842786?v=4", + "description": "pyEQUIB - Python Package for Plasma Diagnostics and Abundance Analysis", "topics": [ - "hyperopt", - "keras", - "hyperparameter-optimization" + "atomic-level-populations", + "chemical-elements", + "line-emissivities", + "statistical-equilibrium", + "python", + "pyequib" ] }, { - "uid": "github/astronomyk/SimCADO", - "url": "https://github.com/astronomyk/SimCADO", - "rel": "/software/repository/github/astronomyk/SimCADO", - "avatar": "https://avatars.githubusercontent.com/u/9432898?v=4", - "description": null, - "topics": [] + "uid": "github/exoplanet-dev/exoplanet", + "url": "https://github.com/exoplanet-dev/exoplanet", + "rel": "/software/repository/github/exoplanet-dev/exoplanet", + "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", + "description": "Fast & scalable MCMC for all your exoplanet needs! ", + "topics": [ + "exoplanet", + "exoplanet-transits", + "exoplanet-radial-velocities", + "mcmc", + "gaussian-processes", + "bayesian-inference", + "pymc3", + "time-series", + "time-series-analysis", + "astronomy", + "astrophysics", + "exoplanets" + ] }, { - "uid": "github/IMS-MAXIMS/openMAXIMS", - "url": "https://github.com/IMS-MAXIMS/openMAXIMS", - "rel": "/software/repository/github/IMS-MAXIMS/openMAXIMS", - "avatar": "https://avatars.githubusercontent.com/u/7870089?v=4", - "description": "Home of the openMAXIMS PAS and EPR", + "uid": "github/exoplanet-dev/celerite2", + "url": "https://github.com/exoplanet-dev/celerite2", + "rel": "/software/repository/github/exoplanet-dev/celerite2", + "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", + "description": "Fast & scalable Gaussian Processes in one dimension", "topics": [] }, { - "uid": "github/wjakethompson/measr", - "url": "https://github.com/wjakethompson/measr", - "rel": "/software/repository/github/wjakethompson/measr", - "avatar": "https://avatars.githubusercontent.com/u/6980750?v=4", - "description": "R package for the Bayesian estimation of diagnostic classification models using Stan", + "uid": "github/exoplanet-dev/jaxoplanet", + "url": "https://github.com/exoplanet-dev/jaxoplanet", + "rel": "/software/repository/github/exoplanet-dev/jaxoplanet", + "avatar": "https://avatars.githubusercontent.com/u/60150744?v=4", + "description": "Astronomical time series analysis with JAX", "topics": [ - "bayesian", - "cdm", - "cmdstanr", - "cognitive-diagnostic-models", - "dcm", - "r", - "r-package", - "rstan", - "rstats", - "stan", - "diagnostic-classification-models", - "cognitive-diagnosis", - "psychometrics" + "astronomy", + "astrophysics", + "bayesian-inference", + "exoplanets", + "jax", + "python", + "time-series" ] }, { - "uid": "github/jeaadams/ExoPix", - "url": "https://github.com/jeaadams/ExoPix", - "rel": "/software/repository/github/jeaadams/ExoPix", - "avatar": "https://avatars.githubusercontent.com/u/39896713?v=4", - "description": null, + "uid": "github/kartheikiyer/dense_basis", + "url": "https://github.com/kartheikiyer/dense_basis", + "rel": "/software/repository/github/kartheikiyer/dense_basis", + "avatar": "https://avatars.githubusercontent.com/u/14657226?v=4", + "description": "Dense Basis SED fitting", + "topics": [ + "sed-fitting", + "galaxy-evolution", + "star-formation-history", + "data-compression" + ] + }, + { + "uid": "github/hdeeg/KvW", + "url": "https://github.com/hdeeg/KvW", + "rel": "/software/repository/github/hdeeg/KvW", + "avatar": "https://avatars.githubusercontent.com/u/28144968?v=4", + "description": "Kwee Van Woerden algorithm for eclipse or transit minimum timing, with improved error calculation", "topics": [] }, { - "uid": "github/yuansliu/minirmd", - "url": "https://github.com/yuansliu/minirmd", - "rel": "/software/repository/github/yuansliu/minirmd", - "avatar": "https://avatars2.githubusercontent.com/u/7776655?v=4", - "description": null, + "uid": "github/christophmschaefer/miluphcuda", + "url": "https://github.com/christophmschaefer/miluphcuda", + "rel": "/software/repository/github/christophmschaefer/miluphcuda", + "avatar": "https://avatars.githubusercontent.com/u/52719134?v=4", + "description": "smooth particle hydrodynamics code", "topics": [] }, { - "uid": "github/dokkum/maskfill", - "url": "https://github.com/dokkum/maskfill", - "rel": "/software/repository/github/dokkum/maskfill", - "avatar": "https://avatars.githubusercontent.com/u/30157643?v=4", - "description": "Fill in masked values in an image", + "uid": "github/fpavogt/fcmaker", + "url": "https://github.com/fpavogt/fcmaker", + "rel": "/software/repository/github/fpavogt/fcmaker", + "avatar": "https://avatars.githubusercontent.com/u/13974615?v=4", + "description": "An automated finding-chart-making program for Observing Blocks on p2.", "topics": [] }, { - "uid": "github/pelahi/TreeFrog", - "url": "https://github.com/pelahi/TreeFrog", - "rel": "/software/repository/github/pelahi/TreeFrog", - "avatar": "https://avatars.githubusercontent.com/u/12030027?v=4", - "description": "Software to build Halo Merger Trees/compare halo catalogs", + "uid": "github/fpavogt/E0102-VR", + "url": "https://github.com/fpavogt/E0102-VR", + "rel": "/software/repository/github/fpavogt/E0102-VR", + "avatar": "https://avatars.githubusercontent.com/u/13974615?v=4", + "description": "An experimental VR application to visualize the 3D map of the oxygen-bright ejecta in SNR 1E 0102.2-7219", "topics": [] }, { - "uid": "github/pelahi/VELOCIraptor-STF", - "url": "https://github.com/pelahi/VELOCIraptor-STF", - "rel": "/software/repository/github/pelahi/VELOCIraptor-STF", - "avatar": "https://avatars.githubusercontent.com/u/12030027?v=4", - "description": "Galaxy/(sub)Halo finder for N-body simulations", + "uid": "github/swiss-seismological-service/DUGseis", + "url": "https://github.com/swiss-seismological-service/DUGseis", + "rel": "/software/repository/github/swiss-seismological-service/DUGseis", + "avatar": "https://avatars.githubusercontent.com/u/50695471?v=4", + "description": "Software for acquisition and processing of micro-seismic data", "topics": [] }, { - "uid": "github/BioDepot/biodepot-launcher", - "url": "https://github.com/BioDepot/biodepot-launcher", - "rel": "/software/repository/github/BioDepot/biodepot-launcher", - "avatar": "https://avatars.githubusercontent.com/u/17000008?v=4", - "description": null, + "uid": "github/Griffan/VerifyBamID", + "url": "https://github.com/Griffan/VerifyBamID", + "rel": "/software/repository/github/Griffan/VerifyBamID", + "avatar": "https://avatars.githubusercontent.com/u/2037838?v=4", + "description": "VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.", + "topics": [ + "genetics", + "dna-sequences", + "qc-analysis", + "contamination", + "bioinformatics", + "biostatistics", + "bam", + "cram" + ] + }, + { + "uid": "github/samaygarg/fuelcell", + "url": "https://github.com/samaygarg/fuelcell", + "rel": "/software/repository/github/samaygarg/fuelcell", + "avatar": "https://avatars.githubusercontent.com/u/60327888?v=4", + "description": "Electrochemical data analysis package", "topics": [] }, { - "uid": "github/DrSoulain/PREVIS", - "url": "https://github.com/DrSoulain/PREVIS", - "rel": "/software/repository/github/DrSoulain/PREVIS", - "avatar": "https://avatars.githubusercontent.com/u/11616707?v=4", - "description": "Python Request Engine for Virtual Interferometric Survey", + "uid": "github/kkjawz/coref-ee", + "url": "https://github.com/kkjawz/coref-ee", + "rel": "/software/repository/github/kkjawz/coref-ee", + "avatar": "https://avatars1.githubusercontent.com/u/888122?v=4", + "description": "Coreference Resolution With Entity Equalization", + "topics": [] + }, + { + "uid": "github/jveitchmichaelis/pygadgetreader", + "url": "https://github.com/jveitchmichaelis/pygadgetreader", + "rel": "/software/repository/github/jveitchmichaelis/pygadgetreader", + "avatar": "https://avatars.githubusercontent.com/u/3159591?v=4", + "description": "A mirror of pygadgetreader because BItbucket stopped hosting Mercurial repos (and we needed it now!)", "topics": [ - "astronomy", - "interferometry", - "observational-data" + "python", + "gadget", + "cosmology" ] }, { - "uid": "github/y-256/libdivsufsort", - "url": "https://github.com/y-256/libdivsufsort", - "rel": "/software/repository/github/y-256/libdivsufsort", - "avatar": "https://avatars.githubusercontent.com/u/2227210?v=4", - "description": "A lightweight suffix-sorting library", + "uid": "github/lwang-astro/PeTar", + "url": "https://github.com/lwang-astro/PeTar", + "rel": "/software/repository/github/lwang-astro/PeTar", + "avatar": "https://avatars.githubusercontent.com/u/8628138?v=4", + "description": "PeTar is a high-performance N-body code for modelling the evolution of star clusters and tidal streams, including the effect of galactic potential, dynamics of binary and hierarchical system, single and binary stellar evolution.", + "topics": [ + "petar", + "parallelization", + "sdar", + "clusters", + "cuda", + "particle-data", + "particles", + "fdps" + ] + }, + { + "uid": "github/lwang-astro/SDAR", + "url": "https://github.com/lwang-astro/SDAR", + "rel": "/software/repository/github/lwang-astro/SDAR", + "avatar": "https://avatars.githubusercontent.com/u/8628138?v=4", + "description": "Slow-down Algorithmic regularization (SDAR) code for solving few-body problems", "topics": [] }, { - "uid": "github/eead-csic-compbio/get_homologues", - "url": "https://github.com/eead-csic-compbio/get_homologues", - "rel": "/software/repository/github/eead-csic-compbio/get_homologues", - "avatar": "https://avatars.githubusercontent.com/u/15164836?v=4", - "description": "GET_HOMOLOGUES: a versatile software package for pan-genome analysis", + "uid": "github/PDB-REDO/dssp", + "url": "https://github.com/PDB-REDO/dssp", + "rel": "/software/repository/github/PDB-REDO/dssp", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "Application to assign secondary structure to proteins", "topics": [ - "pangenome", - "bacteria", - "annotation", - "plants", - "transcriptome", - "clustering", - "fasta", - "genbank", - "pangene" + "dssp", + "pdb", + "proteins" ] }, { - "uid": "github/WorkflowConversion/CTDConverter", - "url": "https://github.com/WorkflowConversion/CTDConverter", - "rel": "/software/repository/github/WorkflowConversion/CTDConverter", - "avatar": "https://avatars.githubusercontent.com/u/12558928?v=4", - "description": "Series of python scripts to convert CTD files into other formats such as Galaxy, CWL", + "uid": "github/PDB-REDO/cif-tools", + "url": "https://github.com/PDB-REDO/cif-tools", + "rel": "/software/repository/github/PDB-REDO/cif-tools", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "A suite of programs to manipulate and examine mmCIF files", "topics": [] }, { - "uid": "github/WorkflowConversion/CTDopts", - "url": "https://github.com/WorkflowConversion/CTDopts", - "rel": "/software/repository/github/WorkflowConversion/CTDopts", - "avatar": "https://avatars.githubusercontent.com/u/12558928?v=4", - "description": "Gives your command-line tools a CTD-compatible interface", + "uid": "github/PDB-REDO/libpdb-redo", + "url": "https://github.com/PDB-REDO/libpdb-redo", + "rel": "/software/repository/github/PDB-REDO/libpdb-redo", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "Library containing shared code for various PDB-REDO programs", + "topics": [] + }, + { + "uid": "github/PDB-REDO/libcifpp", + "url": "https://github.com/PDB-REDO/libcifpp", + "rel": "/software/repository/github/PDB-REDO/libcifpp", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "Library containing code to manipulate mmCIF and PDB files", "topics": [ - "hacktoberfest", - "ctd" + "mmcif", + "pdb-files", + "protein-structure" ] }, { - "uid": "github/ocxtal/minialign", - "url": "https://github.com/ocxtal/minialign", - "rel": "/software/repository/github/ocxtal/minialign", - "avatar": "https://avatars.githubusercontent.com/u/16234240?v=4", - "description": "[IMPORTANT: not for real data analysis, only for algorithm evaluation] fast and accurate alignment tool for PacBio and Nanopore long reads", + "uid": "github/PDB-REDO/density-fitness", + "url": "https://github.com/PDB-REDO/density-fitness", + "rel": "/software/repository/github/PDB-REDO/density-fitness", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "Application to calculate the density statistics (RSR, SRSR, RSCCS, EDIAm and OPIA) for x-ray structures", "topics": [] }, { - "uid": "github/beckrob/Photo-z-SQL", - "url": "https://github.com/beckrob/Photo-z-SQL", - "rel": "/software/repository/github/beckrob/Photo-z-SQL", - "avatar": "https://avatars.githubusercontent.com/u/10948917?v=4", - "description": "C# template-based photometric redshift estimation framework", + "uid": "github/PDB-REDO/tortoize", + "url": "https://github.com/PDB-REDO/tortoize", + "rel": "/software/repository/github/PDB-REDO/tortoize", + "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", + "description": "Application to calculate ramachandran z-scores", "topics": [] }, { - "uid": "github/FRBs/FRB", - "url": "https://github.com/FRBs/FRB", - "rel": "/software/repository/github/FRBs/FRB", - "avatar": "https://avatars.githubusercontent.com/u/26460191?v=4", - "description": "Python code related to DM calculations, estimations, and analysis", + "uid": "github/labcbb/SqueezeCall", + "url": "https://github.com/labcbb/SqueezeCall", + "rel": "/software/repository/github/labcbb/SqueezeCall", + "avatar": "https://avatars.githubusercontent.com/u/192578463?v=4", + "description": null, "topics": [] }, { - "uid": "github/firedrakeproject/firedrake", - "url": "https://github.com/firedrakeproject/firedrake", - "rel": "/software/repository/github/firedrakeproject/firedrake", - "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", - "description": "Firedrake is an automated system for the portable solution of partial differential equations using the finite element method (FEM)", + "uid": "github/Kingsford-Group/scallop", + "url": "https://github.com/Kingsford-Group/scallop", + "rel": "/software/repository/github/Kingsford-Group/scallop", + "avatar": "https://avatars.githubusercontent.com/u/7586159?v=4", + "description": "Scallop is a reference-based transcriptome assembler for RNA-seq", "topics": [] }, { - "uid": "github/firedrakeproject/checkpoint_schedules", - "url": "https://github.com/firedrakeproject/checkpoint_schedules", - "rel": "/software/repository/github/firedrakeproject/checkpoint_schedules", - "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", - "description": "Schedules for incremental checkpointing of adjoint simulations.", + "uid": "github/lmwalkowicz/Cheetah", + "url": "https://github.com/lmwalkowicz/Cheetah", + "rel": "/software/repository/github/lmwalkowicz/Cheetah", + "avatar": "https://avatars.githubusercontent.com/u/2147416?v=4", + "description": null, "topics": [] }, { - "uid": "github/firedrakeproject/gusto", - "url": "https://github.com/firedrakeproject/gusto", - "rel": "/software/repository/github/firedrakeproject/gusto", - "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", - "description": "Three dimensional atmospheric dynamical core using the Gung Ho numerics.", + "uid": "github/FDPS/FDPS", + "url": "https://github.com/FDPS/FDPS", + "rel": "/software/repository/github/FDPS/FDPS", + "avatar": "https://avatars.githubusercontent.com/u/10935829?v=4", + "description": "Github repository for FDPS", "topics": [] }, { - "uid": "github/tne-lab/py-behav-box-v2", - "url": "https://github.com/tne-lab/py-behav-box-v2", - "rel": "/software/repository/github/tne-lab/py-behav-box-v2", - "avatar": "https://avatars.githubusercontent.com/u/30088789?v=4", - "description": "Pybehave is an open source software interface and framework for controlling behavioral experiments in neuroscience and psychology.", + "uid": "github/cmayer/BaitFisher-package", + "url": "https://github.com/cmayer/BaitFisher-package", + "rel": "/software/repository/github/cmayer/BaitFisher-package", + "avatar": "https://avatars.githubusercontent.com/u/2019744?v=4", + "description": "The BaitFisher-package is a software package for designing hybrid enrichment probes. For more information see:", "topics": [] }, { - "uid": "github/galizia-lab/pyview", - "url": "https://github.com/galizia-lab/pyview", - "rel": "/software/repository/github/galizia-lab/pyview", - "avatar": "https://avatars.githubusercontent.com/u/89973106?v=4", - "description": "GUI + API for processing and visualizing Calcium imaging data. Largely based on the IDL software \"VIEW\" developed by Giovanni Galizia. Implemented in Python by Ajayrama Kumaraswamy", + "uid": "github/susiegriggo/Phynteny_transformer", + "url": "https://github.com/susiegriggo/Phynteny_transformer", + "rel": "/software/repository/github/susiegriggo/Phynteny_transformer", + "avatar": "https://avatars.githubusercontent.com/u/54240311?v=4", + "description": "Synteny-enhanced annotation of Bacteriophage genes", "topics": [] }, { - "uid": "github/HoBeZwe/SphericalScattering.jl", - "url": "https://github.com/HoBeZwe/SphericalScattering.jl", - "rel": "/software/repository/github/HoBeZwe/SphericalScattering.jl", - "avatar": "https://avatars.githubusercontent.com/u/46812729?v=4", - "description": "This package provides semi-analytical solutions to the scattering of time harmonic and static electromagnetic fields from spherical objects.", - "topics": [ - "dipole", - "electromagnetics", - "hertzian", - "julia", - "mie-scattering", - "plane-wave", - "scattering", - "sphere", - "spherical", - "fitzgerald", - "mie-series", - "ring-current", - "spherical-waves", - "time-harmonic" - ] + "uid": "github/oneilsh/tidytensor", + "url": "https://github.com/oneilsh/tidytensor", + "rel": "/software/repository/github/oneilsh/tidytensor", + "avatar": "https://avatars.githubusercontent.com/u/77859?v=4", + "description": "Utilities for multidimensional arrays as named hierarchical structures", + "topics": [] }, { - "uid": "github/amkrajewski/nimCSO", - "url": "https://github.com/amkrajewski/nimCSO", - "rel": "/software/repository/github/amkrajewski/nimCSO", - "avatar": "https://avatars.githubusercontent.com/u/54290107?v=4", - "description": "nim Composition Space Optimization is a high-performance tool leveraging metaprogramming to implement several methods for selecting components (data dimensions) in compositional datasets, as to optimize the data availability and density for applications such as machine learning.", - "topics": [ - "data-analysis", - "data-optimization", - "data-science", - "materials-informatics", - "metaprogramming", - "nim", - "nim-lang" - ] + "uid": "github/sblunt/orbitize", + "url": "https://github.com/sblunt/orbitize", + "rel": "/software/repository/github/sblunt/orbitize", + "avatar": "https://avatars.githubusercontent.com/u/20113975?v=4", + "description": "Orbit-fitting for directly imaged objects", + "topics": [] }, { - "uid": "github/bjmt/universalmotif", - "url": "https://github.com/bjmt/universalmotif", - "rel": "/software/repository/github/bjmt/universalmotif", - "avatar": "https://avatars.githubusercontent.com/u/24674853?v=4", - "description": "Motif manipulation functions for R.", + "uid": "github/leesulab/arcMS", + "url": "https://github.com/leesulab/arcMS", + "rel": "/software/repository/github/leesulab/arcMS", + "avatar": "https://avatars.githubusercontent.com/u/151855212?v=4", + "description": "Mass spectrometry data converter from UNIFI to Parquet and HDF5 formats", "topics": [ - "r", - "motif-analysis", - "motif-enrichment-analysis", - "sequence-logo" + "converter", + "mass-spectrometry", + "non-target", + "r" ] }, { - "uid": "github/mcgalcode/pylattica", - "url": "https://github.com/mcgalcode/pylattica", - "rel": "/software/repository/github/mcgalcode/pylattica", - "avatar": "https://avatars.githubusercontent.com/u/15318848?v=4", - "description": "A simple framework for prototyping lattice evolution simulations e.g. cellular automata, lattice gas simulations, lattice Monte Carlo etc.", + "uid": "github/Toloka/crowd-kit", + "url": "https://github.com/Toloka/crowd-kit", + "rel": "/software/repository/github/Toloka/crowd-kit", + "avatar": "https://avatars.githubusercontent.com/u/76212487?v=4", + "description": "Control the quality of your labeled data with the Python tools you already know.", "topics": [ - "chemistry", - "lattice", - "materials-science", - "simulation" + "data-science", + "data-mining", + "crowd", + "toloka", + "labeling", + "annotation", + "aggregations", + "python", + "crowdsourcing", + "quality-control", + "truth-inference" ] }, { - "uid": "github/McMahonCosmologyGroup/holosim-ml", - "url": "https://github.com/McMahonCosmologyGroup/holosim-ml", - "rel": "/software/repository/github/McMahonCosmologyGroup/holosim-ml", - "avatar": "https://avatars.githubusercontent.com/u/83089765?v=4", - "description": "machine learning applied to the efficient analysis of radio holography measurements of complex optical systems", + "uid": "github/ClaudioZandonella/PRDA", + "url": "https://github.com/ClaudioZandonella/PRDA", + "rel": "/software/repository/github/ClaudioZandonella/PRDA", + "avatar": "https://avatars.githubusercontent.com/u/44664104?v=4", + "description": "Prospective and Retrospective Design Analysis", "topics": [] }, { - "uid": "github/ucberkeleyseti/turbo_seti", - "url": "https://github.com/UCBerkeleySETI/turbo_seti", - "rel": "/software/repository/github/ucberkeleyseti/turbo_seti", - "avatar": "https://avatars.githubusercontent.com/u/1209848?v=4", - "description": "turboSETI -- python based SETI search algorithm.", + "uid": "github/sevimcengiz/Oryx-MRSI", + "url": "https://github.com/sevimcengiz/Oryx-MRSI", + "rel": "/software/repository/github/sevimcengiz/Oryx-MRSI", + "avatar": "https://avatars.githubusercontent.com/u/5468765?v=4", + "description": null, "topics": [] }, { - "uid": "github/ucberkeleyseti/blimpy", - "url": "https://github.com/UCBerkeleySETI/blimpy", - "rel": "/software/repository/github/ucberkeleyseti/blimpy", - "avatar": "https://avatars.githubusercontent.com/u/1209848?v=4", - "description": "Breakthrough Listen I/O Methods for Python", + "uid": "github/scrm/scrmhub.io", + "url": null, + "rel": "/software/repository/github/scrm/scrmhub.io", + "avatar": "", + "description": "a coalescent simulator for biological sequences.", "topics": [] }, { - "uid": "github/xychcz/S3Fit", - "url": "https://github.com/xychcz/S3Fit", - "rel": "/software/repository/github/xychcz/S3Fit", - "avatar": "https://avatars.githubusercontent.com/u/14907162?v=4", - "description": "S3Fit: a Simultaneous Spectrum and photometric-SED Fitting code for observation of galaxies", + "uid": "github/MrShoenel/metrics-as-scores", + "url": "https://github.com/MrShoenel/metrics-as-scores", + "rel": "/software/repository/github/MrShoenel/metrics-as-scores", + "avatar": "https://avatars.githubusercontent.com/u/5049151?v=4", + "description": "Contains the data and scripts needed for the application Metrics as Scores", "topics": [] }, { - "uid": "github/coleygroup/pyscreener", - "url": "https://github.com/coleygroup/pyscreener", - "rel": "/software/repository/github/coleygroup/pyscreener", - "avatar": "https://avatars.githubusercontent.com/u/55363694?v=4", - "description": "pythonic interface to virtual screening software", - "topics": [ - "virtual-screening", - "computational-biology", - "molecular-docking", - "distributed-computing", - "ray" - ] + "uid": "github/sdrastro/NWelch", + "url": "https://github.com/sdrastro/NWelch", + "rel": "/software/repository/github/sdrastro/NWelch", + "avatar": "https://avatars.githubusercontent.com/u/11234984?v=4", + "description": "python implementation of Welch's method for estimating the power spectra, complex cross-spectrum, magnitude-squared coherence, and phase spectrum of unevenly spaced, bivariate time series", + "topics": [] }, { - "uid": "github/yiling0210/APIR", - "url": "https://github.com/yiling0210/APIR", - "rel": "/software/repository/github/yiling0210/APIR", - "avatar": "https://avatars.githubusercontent.com/u/7484707?v=4", + "uid": "github/project-asgard/asgard", + "url": "https://github.com/project-asgard/asgard", + "rel": "/software/repository/github/project-asgard/asgard", + "avatar": "https://avatars.githubusercontent.com/u/50125104?v=4", "description": null, "topics": [] }, { - "uid": "github/sintefore/TimeStruct.jl", - "url": "https://github.com/sintefore/TimeStruct.jl", - "rel": "/software/repository/github/sintefore/TimeStruct.jl", - "avatar": "https://avatars.githubusercontent.com/u/151619121?v=4", - "description": "Flexible time structures for optimization modeling", - "topics": [] + "uid": "github/minaskar/zeus", + "url": "https://github.com/minaskar/zeus", + "rel": "/software/repository/github/minaskar/zeus", + "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", + "description": "\u26a1\ufe0f zeus: Lightning Fast MCMC \u26a1\ufe0f", + "topics": [ + "mcmc", + "mcmc-sampler", + "bayesian-inference", + "inference", + "machine-learning", + "sampling", + "sampling-methods", + "general-purpose", + "black-box-bayesian-inference", + "probabilistic-data-analysis", + "python" + ] }, { - "uid": "github/fulcrumgenomics/fgbio", - "url": "https://github.com/fulcrumgenomics/fgbio", - "rel": "/software/repository/github/fulcrumgenomics/fgbio", - "avatar": "https://avatars.githubusercontent.com/u/13546013?v=4", - "description": "Tools for working with genomic and high throughput sequencing data.", + "uid": "github/minaskar/hankl", + "url": "https://github.com/minaskar/hankl", + "rel": "/software/repository/github/minaskar/hankl", + "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", + "description": "hankl is a lightweight Python implementation of the FFTLog algorithm for Cosmology", "topics": [ - "analyzing-genomic-data", - "umi", - "bioinformatics", - "ngs", - "scala", - "fgbio", - "molecular-indexes" + "hankel", + "fftlog", + "fft", + "cosmology", + "numerical-integration" ] }, { - "uid": "github/mosdef-hub/mbuild", - "url": "https://github.com/mosdef-hub/mbuild", - "rel": "/software/repository/github/mosdef-hub/mbuild", - "avatar": "https://avatars.githubusercontent.com/u/25673981?v=4", - "description": "A hierarchical, component based molecule builder", + "uid": "github/minaskar/pocomc", + "url": "https://github.com/minaskar/pocomc", + "rel": "/software/repository/github/minaskar/pocomc", + "avatar": "https://avatars.githubusercontent.com/u/23280751?v=4", + "description": "pocoMC: A Python implementation of Preconditioned Monte Carlo for accelerated Bayesian Computation", "topics": [ - "molecular-dynamics", + "astronomy", + "astrophysics", + "bayesian-inference", + "black-box-bayesian-inference", + "cosmology", + "cosmology-inference", + "general-purpose", + "inference", + "machine-learning", + "mcmc", + "mcmc-sampler", + "normalizing-flows", + "probabilistic-data-analysis", "python", - "molecular-simulation", - "molecule-builder", - "mbuild" + "sampling", + "sampling-methods", + "smc" ] }, { - "uid": "github/mosdef-hub/foyer", - "url": "https://github.com/mosdef-hub/foyer", - "rel": "/software/repository/github/mosdef-hub/foyer", - "avatar": "https://avatars.githubusercontent.com/u/25673981?v=4", - "description": "A package for atom-typing as well as applying and disseminating forcefields", + "uid": "github/lczech/gappa", + "url": "https://github.com/lczech/gappa", + "rel": "/software/repository/github/lczech/gappa", + "avatar": "https://avatars.githubusercontent.com/u/4741887?v=4", + "description": "A toolkit for analyzing and visualizing phylogenetic (placement) data", "topics": [ - "molecular-dynamics", - "molecular-simulation", - "force-field", + "c-plus-plus", + "phylogenetics", + "phylogenetic-data", + "phylogenetic-placement", + "evolutionary-placement", + "placement", + "genesis", + "gappa" + ] + }, + { + "uid": "github/pedronachtigall/ToxCodAn-Genome", + "url": "https://github.com/pedronachtigall/ToxCodAn-Genome", + "rel": "/software/repository/github/pedronachtigall/ToxCodAn-Genome", + "avatar": "https://avatars.githubusercontent.com/u/32197975?v=4", + "description": "Toxin genes annotation in genome assembly", + "topics": [] + }, + { + "uid": "github/braindatalab/PyBispectra", + "url": "https://github.com/braindatalab/PyBispectra", + "rel": "/software/repository/github/braindatalab/PyBispectra", + "avatar": "https://avatars.githubusercontent.com/u/65342931?v=4", + "description": "A Python signal analysis toolbox for computing spectral-domain interactions using the bispectrum.", + "topics": [ + "connectivity", + "neuroscience", "python", - "atom-typing", - "foyer", - "disseminating-forcefields" + "signal-processing", + "spectral-analysis", + "bicoherence", + "bispectrum", + "cross-frequency-coupling", + "phase-amplitude-coupling", + "time-delay-estimation", + "amplitude-amplitude-coupling", + "phase-phase-coupling", + "waveform", + "waveshape", + "non-sinusoidal", + "ssd", + "hpmax", + "spatiospectral" ] }, { - "uid": "github/pmelchior/des-exp-checker", - "url": "https://github.com/pmelchior/des-exp-checker", - "rel": "/software/repository/github/pmelchior/des-exp-checker", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Crowdsourced image quality control for the Dark Energy Survey", + "uid": "github/daeken/Emokit", + "url": "https://github.com/daeken/Emokit", + "rel": "/software/repository/github/daeken/Emokit", + "avatar": "https://avatars.githubusercontent.com/u/2359?v=4", + "description": "Python library for the Emotiv EPOC headset", "topics": [] }, { - "uid": "github/pmelchior/shapelens", - "url": "https://github.com/pmelchior/shapelens", - "rel": "/software/repository/github/pmelchior/shapelens", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Astronomical image analysis and shape estimation framework", + "uid": "github/fair-data/fairdatapoint-client", + "url": "https://github.com/fair-data/fairdatapoint-client", + "rel": "/software/repository/github/fair-data/fairdatapoint-client", + "avatar": "https://avatars.githubusercontent.com/u/78078886?v=4", + "description": "Interact with your resources (catalogs/datasets/distributions) in a FDP using python", "topics": [] }, { - "uid": "github/pmelchior/scarlet", - "url": "https://github.com/pmelchior/scarlet", - "rel": "/software/repository/github/pmelchior/scarlet", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "hyperspectral galaxy modeling and deblending", - "topics": [ - "image-analysis", - "source-separation", - "component-separation", - "nmf" - ] + "uid": "github/undark-lab/albatross", + "url": "https://github.com/undark-lab/albatross", + "rel": "/software/repository/github/undark-lab/albatross", + "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", + "description": "A simulation-based Inference (SBI) library designed to perform analysis on stellar streams in the Milky Way", + "topics": [] }, { - "uid": "github/pmelchior/skymapper", - "url": "https://github.com/pmelchior/skymapper", - "rel": "/software/repository/github/pmelchior/skymapper", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Mapping astronomical survey data on the sky, handsomely", + "uid": "github/undark-lab/swyft", + "url": "https://github.com/undark-lab/swyft", + "rel": "/software/repository/github/undark-lab/swyft", + "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", + "description": "Truncated marginal neural ratio estimation estimation with PyTorch.", "topics": [ - "matplotlib", - "maps", - "projection-mapping", - "astronomy" + "pytorch", + "python", + "simulation-based", + "inference" ] }, { - "uid": "github/pmelchior/shear-stacking", - "url": "https://github.com/pmelchior/shear-stacking", - "rel": "/software/repository/github/pmelchior/shear-stacking", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Stacked shear profiles and tests based upon them", + "uid": "github/undark-lab/sstrax", + "url": "https://github.com/undark-lab/sstrax", + "rel": "/software/repository/github/undark-lab/sstrax", + "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", + "description": "A jax-accelerated modelling code for Milky Way stellar streams", "topics": [] }, { - "uid": "github/pmelchior/skylens", - "url": "https://github.com/pmelchior/skylens", - "rel": "/software/repository/github/pmelchior/skylens", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "SkyLens++ is a simulation package for optical astronomical observations.", + "uid": "github/florisvb/PyNumDiff", + "url": "https://github.com/florisvb/PyNumDiff", + "rel": "/software/repository/github/florisvb/PyNumDiff", + "avatar": "https://avatars.githubusercontent.com/u/246332?v=4", + "description": "Methods for numerical differentiation of noisy data in python", "topics": [] }, { - "uid": "github/pmelchior/epsnoise", - "url": "https://github.com/pmelchior/epsnoise", - "rel": "/software/repository/github/pmelchior/epsnoise", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Simulate pixel noise for weak-lensing ellipticity measurements", + "uid": "github/parkus/scicatalog", + "url": "https://github.com/parkus/scicatalog", + "rel": "/software/repository/github/parkus/scicatalog", + "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", + "description": null, "topics": [] }, { - "uid": "github/pmelchior/pyGMMis", - "url": "https://github.com/pmelchior/pygmmis", - "rel": "/software/repository/github/pmelchior/pyGMMis", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Gaussian mixture model for incomplete (missing or truncated) and noisy data", - "topics": [ - "data-analysis", - "gmm" - ] + "uid": "github/parkus/ffd", + "url": "https://github.com/parkus/ffd", + "rel": "/software/repository/github/parkus/ffd", + "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", + "description": "Tools for the analysis of flare frequency distributions for flares detected in heterogenous datasets.", + "topics": [] }, { - "uid": "github/pmelchior/spender", - "url": "https://github.com/pmelchior/spender", - "rel": "/software/repository/github/pmelchior/spender", - "avatar": "https://avatars.githubusercontent.com/u/1463403?v=4", - "description": "Spectrum encoder and decoder", + "uid": "github/parkus/fiducial_flare", + "url": "https://github.com/parkus/fiducial_flare", + "rel": "/software/repository/github/parkus/fiducial_flare", + "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", + "description": "Generate spectra and lightcurves of a standardized far ultraviolet flare.", + "topics": [] + }, + { + "uid": "github/Aminsinichi/wearable-hrv", + "url": "https://github.com/Aminsinichi/wearable-hrv", + "rel": "/software/repository/github/Aminsinichi/wearable-hrv", + "avatar": "https://avatars.githubusercontent.com/u/126984097?v=4", + "description": "A Python package for the validation of heart rate and heart rate variability in wearables", "topics": [ - "astronomy", - "autoencoder", - "spectroscopy" + "heart-rate", + "heart-rate-variability", + "hrv", + "psychophysiology", + "python", + "wearables", + "validation" ] }, { - "uid": "github/EACcodes/TigerCI", - "url": "https://github.com/EACcodes/TigerCI", - "rel": "/software/repository/github/EACcodes/TigerCI", - "avatar": "https://avatars.githubusercontent.com/u/19611690?v=4", - "description": null, + "uid": "github/MCTwo/MCMAC", + "url": "https://github.com/MCTwo/MCMAC", + "rel": "/software/repository/github/MCTwo/MCMAC", + "avatar": "https://avatars.githubusercontent.com/u/3769419?v=4", + "description": "Monte Carlo Merger Analysis Code (MCMAC)", "topics": [] }, { - "uid": "github/APGG-Lab/APGG", - "url": "https://github.com/APGG-Lab/APGG", - "rel": "/software/repository/github/APGG-Lab/APGG", - "avatar": "https://avatars.githubusercontent.com/u/81275407?v=4", - "description": "A Modular Toolkit for Public Goods Game Computation", + "uid": "github/isce-framework/dolphin", + "url": "https://github.com/isce-framework/dolphin", + "rel": "/software/repository/github/isce-framework/dolphin", + "avatar": "https://avatars.githubusercontent.com/u/46032197?v=4", + "description": "InSAR phase linking library for PS/DS processing", "topics": [ - "genetic-algorithm", - "genetic-programming", - "public-goods-game" + "insar", + "time-series", + "deformation", + "squeesar", + "phase-linking", + "geoscience", + "geospatial-processing", + "remote-sensing" ] }, { - "uid": "github/jacksund/simmate", - "url": "https://github.com/jacksund/simmate", - "rel": "/software/repository/github/jacksund/simmate", - "avatar": "https://avatars.githubusercontent.com/u/47992949?v=4", - "description": "The Simulated Materials Ecosystem (Simmate) is a toolbox and framework for computational materials research.", + "uid": "github/galtay/sphray", + "url": "https://github.com/galtay/sphray", + "rel": "/software/repository/github/galtay/sphray", + "avatar": "https://avatars.githubusercontent.com/u/663051?v=4", + "description": " THIS CODE IS HERE FOR ARCHIVAL PURPOSES AND IS NOT MAINTAINED", "topics": [] }, { - "uid": "github/CalumHawcroft/Starburst", - "url": "https://github.com/CalumHawcroft/Starburst", - "rel": "/software/repository/github/CalumHawcroft/Starburst", - "avatar": "https://avatars.githubusercontent.com/u/180121613?v=4", - "description": null, + "uid": "github/galtay/urchin", + "url": "https://github.com/galtay/urchin", + "rel": "/software/repository/github/galtay/urchin", + "avatar": "https://avatars.githubusercontent.com/u/663051?v=4", + "description": "Repository for archival storage of Urchin code.", "topics": [] }, { - "uid": "github/SunilAnandatheertha/PXO", - "url": "https://github.com/SunilAnandatheertha/PXO", - "rel": "/software/repository/github/SunilAnandatheertha/PXO", - "avatar": "https://avatars.githubusercontent.com/u/66170566?v=4", - "description": "PXO (Poly-XTAL Operations). Generate, analyze and export complex 2D space partitions like metallic grain structures", + "uid": "github/FlowModelingControl/flowtorch", + "url": "https://github.com/FlowModelingControl/flowtorch", + "rel": "/software/repository/github/FlowModelingControl/flowtorch", + "avatar": "https://avatars.githubusercontent.com/u/89638677?v=4", + "description": "flowTorch - a Python library for analysis and reduced-order modeling of fluid flows", "topics": [ - "crystallographic-texture", - "grain-structure", - "grains", - "grain-boundaries", - "poly-crystal", - "particle-limited-grain-growth", - "ising-model", - "potts-model", - "monte-carlo-simulations", - "crystallographic-orientations", - "texture" + "machine-learning", + "dynamic-mode-decomposition", + "proper-orthogonal-decomposition", + "pytorch", + "jupyter", + "openfoam", + "netcdf", + "tau", + "davis", + "csv", + "hdf5", + "ipsp", + "dmd", + "pod", + "cnm" ] }, { - "uid": "github/zenitani/OpenMHD", - "url": "https://github.com/zenitani/OpenMHD", - "rel": "/software/repository/github/zenitani/OpenMHD", - "avatar": "https://avatars.githubusercontent.com/u/97611?v=4", - "description": null, + "uid": "github/BenWibking/quokka", + "url": "https://github.com/BenWibking/quokka", + "rel": "/software/repository/github/BenWibking/quokka", + "avatar": "https://avatars.githubusercontent.com/u/1781919?v=4", + "description": "Two-moment AMR radiation hydrodynamics on GPUs for astrophysics", + "topics": [ + "cuda", + "gpu", + "hydrodynamics", + "adaptive-mesh-refinement" + ] + }, + { + "uid": "github/flexible-atomic-code/fac", + "url": "https://github.com/flexible-atomic-code/fac", + "rel": "/software/repository/github/flexible-atomic-code/fac", + "avatar": "https://avatars.githubusercontent.com/u/37819651?v=4", + "description": "FAC - Flexible Atomic Code by Ming Feng Gu", "topics": [] }, { - "uid": "github/Rnazx/Scaling-Relations", - "url": "https://github.com/Rnazx/Scaling-Relations", - "rel": "/software/repository/github/Rnazx/Scaling-Relations", - "avatar": "https://avatars.githubusercontent.com/u/42196798?v=4", - "description": "Python code to find the scaling relations for the galactic magnetic fields in terms of observables.", + "uid": "github/TravisWheelerLab/VIBES", + "url": "https://github.com/TravisWheelerLab/VIBES", + "rel": "/software/repository/github/TravisWheelerLab/VIBES", + "avatar": "https://avatars.githubusercontent.com/u/19337416?v=4", + "description": "Viral Integrations in Bacterial genomES", "topics": [] }, { - "uid": "github/WaterFutures/EPyT-Flow", - "url": "https://github.com/WaterFutures/EPyT-Flow", - "rel": "/software/repository/github/WaterFutures/EPyT-Flow", - "avatar": "https://avatars.githubusercontent.com/u/149570313?v=4", - "description": "A high-level interface designed for the easy generation of hydraulic and water quality scenario data.", - "topics": [ - "epanet", - "epanet-python-toolkit", - "python", - "simulation", - "water", - "water-distribution-networks" - ] + "uid": "github/TravisWheelerLab/NINJA", + "url": "https://github.com/TravisWheelerLab/NINJA", + "rel": "/software/repository/github/TravisWheelerLab/NINJA", + "avatar": "https://avatars.githubusercontent.com/u/19337416?v=4", + "description": "Nearly Infinite Neighbor Joining Application", + "topics": [] }, { - "uid": "github/flexible-atomic-code/fac", - "url": "https://github.com/flexible-atomic-code/fac", - "rel": "/software/repository/github/flexible-atomic-code/fac", - "avatar": "https://avatars.githubusercontent.com/u/37819651?v=4", - "description": "FAC - Flexible Atomic Code by Ming Feng Gu", + "uid": "github/BasilioRuiz/SIR-code", + "url": "https://github.com/BasilioRuiz/SIR-code", + "rel": "/software/repository/github/BasilioRuiz/SIR-code", + "avatar": "https://avatars.githubusercontent.com/u/27848748?v=4", + "description": null, "topics": [] }, { - "uid": "github/GenomicParisCentre/toulligQC", - "url": "https://github.com/GenomiqueENS/toulligQC", - "rel": "/software/repository/github/GenomicParisCentre/toulligQC", - "avatar": "https://avatars.githubusercontent.com/u/7766622?v=4", - "description": "A post sequencing QC tool for Oxford Nanopore sequencers", + "uid": "github/ArgonneCPAC/diffmah", + "url": "https://github.com/ArgonneCPAC/diffmah", + "rel": "/software/repository/github/ArgonneCPAC/diffmah", + "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", + "description": "Differentiable models of halo and galaxy formation history", "topics": [] }, { - "uid": "github/NickMilsonPhysics/BinaryStarSolver", - "url": "https://github.com/NickMilsonPhysics/BinaryStarSolver", - "rel": "/software/repository/github/NickMilsonPhysics/BinaryStarSolver", - "avatar": "https://avatars.githubusercontent.com/u/71746058?v=4", - "description": "BinaryStarSolver is a Python 3 program which solves for the orbital elements of binary stars, given radial velocity time series", - "topics": [ - "astronomy", - "binary-stars", - "radial-velocity", - "rv", - "orbit" - ] + "uid": "github/ArgonneCPAC/dsps", + "url": "https://github.com/ArgonneCPAC/dsps", + "rel": "/software/repository/github/ArgonneCPAC/dsps", + "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", + "description": "Differentiable Stellar Population Synthesis", + "topics": [] }, { - "uid": "github/soylentdeen/MoogStokes", - "url": "https://github.com/soylentdeen/MoogStokes", - "rel": "/software/repository/github/soylentdeen/MoogStokes", - "avatar": "https://avatars.githubusercontent.com/u/210195?v=4", - "description": "Artisanal Zeeman Radiative Transfer", + "uid": "github/ArgonneCPAC/diffstar", + "url": "https://github.com/ArgonneCPAC/diffstar", + "rel": "/software/repository/github/ArgonneCPAC/diffstar", + "avatar": "https://avatars.githubusercontent.com/u/43156952?v=4", + "description": "Differentiable star formation histories", "topics": [] }, { - "uid": "github/soylentdeen/CounterPoint", - "url": "https://github.com/soylentdeen/CounterPoint", - "rel": "/software/repository/github/soylentdeen/CounterPoint", - "avatar": "https://avatars.githubusercontent.com/u/210195?v=4", - "description": "Python Companion to MoogStokes", - "topics": [] + "uid": "github/bbuchfink/diamond", + "url": "https://github.com/bbuchfink/diamond", + "rel": "/software/repository/github/bbuchfink/diamond", + "avatar": "https://avatars.githubusercontent.com/u/10001338?v=4", + "description": "Accelerated BLAST compatible local sequence aligner.", + "topics": [ + "sequence-alignment" + ] }, { - "uid": "github/snowformatics/macrobot", - "url": "https://github.com/snowformatics/macrobot", - "rel": "/software/repository/github/snowformatics/macrobot", - "avatar": "https://avatars3.githubusercontent.com/u/5192670?v=4", - "description": "Macrobot is an open source image analysis software for studying plant-pathogen interactions on macroscopic level.", + "uid": "github/goshng/polap", + "url": "https://github.com/goshng/polap", + "rel": "/software/repository/github/goshng/polap", + "avatar": "https://avatars.githubusercontent.com/u/478173?v=4", + "description": "Polap is a plant mtDNA assembly pipeline using Flye long-read assembler guided by organelle gene annotation.", "topics": [ - "plant-pathogen-interactions", - "image-analysis", - "python", - "computer-vision" + "genome-annotation", + "genome-assembly", + "mitochondrial-genomes", + "plant" ] }, { - "uid": "github/cnsetzer/kilopop", - "url": "https://github.com/cnsetzer/kilopop", - "rel": "/software/repository/github/cnsetzer/kilopop", - "avatar": "https://avatars.githubusercontent.com/u/32570203?v=4", - "description": "Binary neutron star (BNS) population of optical kilonovae (kNe).", - "topics": [] + "uid": "github/tomalf2/recombinhunt-cov", + "url": "https://github.com/tomalf2/recombinhunt-cov", + "rel": "/software/repository/github/tomalf2/recombinhunt-cov", + "avatar": "https://avatars.githubusercontent.com/u/16090037?v=4", + "description": "RecombinHunt (alias for the software contained in this repository) is a Python library implementing a data-driven novel method for identifying contributing lineages and breakpoints in recombinant viral sequences.", + "topics": [ + "big-data", + "bioinformatics", + "data-science", + "recombination", + "research", + "viral-genomics" + ] }, { - "uid": "github/coder/code-server", - "url": "https://github.com/coder/code-server", - "rel": "/software/repository/github/coder/code-server", - "avatar": "https://avatars.githubusercontent.com/u/95932066?v=4", - "description": "VS Code in the browser", + "uid": "github/bwinkel/cygrid", + "url": "https://github.com/bwinkel/cygrid", + "rel": "/software/repository/github/bwinkel/cygrid", + "avatar": "https://avatars.githubusercontent.com/u/6582333?v=4", + "description": "Cygrid is a cython-powered convolution-based gridding module for astronomy", "topics": [ - "vscode", - "vscode-remote", - "ide", - "remote-work", - "development-environment", - "dev-tools", - "browser-ide" + "astronomy", + "python", + "gridding", + "resampling" ] }, { - "uid": "github/youngjookim/sdr", - "url": "https://github.com/youngjookim/sdr", - "rel": "/software/repository/github/youngjookim/sdr", - "avatar": "https://avatars.githubusercontent.com/u/6983325?v=4", - "description": null, + "uid": "github/PimenoffV/biotic", + "url": "https://github.com/PimenoffV/Biotic", + "rel": "/software/repository/github/PimenoffV/biotic", + "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", + "description": "Comprehensive biotic analysis of metagenomes from environmental and aerosol metagenomes.", "topics": [] }, { - "uid": "github/DICP1810/ComMap", - "url": "https://github.com/DICP1810/ComMap", - "rel": "/software/repository/github/DICP1810/ComMap", - "avatar": "https://avatars.githubusercontent.com/u/46855251?v=4", - "description": "CXMS generated cross-linking pairs mapping to structures", + "uid": "github/PimenoffV/Abiotic", + "url": "https://github.com/PimenoffV/Abiotic", + "rel": "/software/repository/github/PimenoffV/Abiotic", + "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", + "description": "Integration of abiotic environmental chemical data and analysis with biotic infirmation. ", "topics": [] }, { - "uid": "github/DICP1810/SpotLink", - "url": "https://github.com/DICP1810/SpotLink", - "rel": "/software/repository/github/DICP1810/SpotLink", - "avatar": "https://avatars.githubusercontent.com/u/46855251?v=4", - "description": "SpotLinkTest", + "uid": "github/PimenoffV/VIBE", + "url": "https://github.com/PimenoffV/VIBE", + "rel": "/software/repository/github/PimenoffV/VIBE", + "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", + "description": "Visualization of Integrated Biological Exposures (VIBE) from wearable devices.", "topics": [] }, { - "uid": "github/sebhoof/SolarAxionFlux", - "url": "https://github.com/sebhoof/SolarAxionFlux", - "rel": "/software/repository/github/sebhoof/SolarAxionFlux", - "avatar": "https://avatars.githubusercontent.com/u/15237674?v=4", - "description": "A C++/Python library for calculating the solar axion flux for different solar models and opacity codes.", - "topics": [ - "physics", - "sun", - "axions", - "helioscopes", - "alps" - ] + "uid": "github/caseyjlaw/tpipe", + "url": "https://github.com/caseyjlaw/tpipe", + "rel": "/software/repository/github/caseyjlaw/tpipe", + "avatar": "https://avatars.githubusercontent.com/u/1878317?v=4", + "description": "Python library to search radio interferometry data for dispersed (fast) transients **superseded by caseyjlaw/rtpipe**", + "topics": [] }, { - "uid": "github/NorwegianVeterinaryInstitute/ALPPACA", - "url": "https://github.com/NorwegianVeterinaryInstitute/ALPPACA", - "rel": "/software/repository/github/NorwegianVeterinaryInstitute/ALPPACA", - "avatar": "https://avatars.githubusercontent.com/u/17404400?v=4", - "description": "A tooL for Prokaryotic Phylogeny And Clustering Analysis", + "uid": "github/caseyjlaw/rtpipe", + "url": "https://github.com/caseyjlaw/rtpipe", + "rel": "/software/repository/github/caseyjlaw/rtpipe", + "avatar": "https://avatars.githubusercontent.com/u/1878317?v=4", + "description": "Pipeline for real-time fast transient detection in radio interferometric data (see also https://github.com/realfastvla/rfpipe)", "topics": [ - "phylogeny", - "clustering", - "nextflow", - "pipeline" + "astronomy", + "interferometry", + "radio", + "casa", + "python", + "notebook", + "binder", + "jupyter-notebook", + "transients" ] }, { - "uid": "github/jimmink/argslab", - "url": "https://github.com/jimmink/argslab", - "rel": "/software/repository/github/jimmink/argslab", - "avatar": "https://avatars.githubusercontent.com/u/80682535?v=4", - "description": "Repository for ArGSLab, Arrested and Gelated Structures Laboratory.", + "uid": "github/FSEC-Photovoltaics/pvrpm-lcoe", + "url": "https://github.com/FSEC-Photovoltaics/pvrpm-lcoe", + "rel": "/software/repository/github/FSEC-Photovoltaics/pvrpm-lcoe", + "avatar": "https://avatars.githubusercontent.com/u/72280691?v=4", + "description": "PV Simulation using SAM and Python", "topics": [] }, { - "uid": "github/nhurleywalker/fits_warp", - "url": "https://github.com/nhurleywalker/fits_warp", - "rel": "/software/repository/github/nhurleywalker/fits_warp", - "avatar": "https://avatars.githubusercontent.com/u/8326966?v=4", - "description": "Warp catalogues and images to dedistort the effects of the ionosphere", + "uid": "github/DingshanDeng/ysoisochrone", + "url": "https://github.com/DingshanDeng/ysoisochrone", + "rel": "/software/repository/github/DingshanDeng/ysoisochrone", + "avatar": "https://avatars.githubusercontent.com/u/88793427?v=4", + "description": "This is the Python package that handles the isochrones for young stellar objects (YSOs). One of the primary goals of this package is to derive the stellar mass and ages from the isochrones.", "topics": [] }, { - "uid": "github/bwvdnbro/CMacIonize", - "url": "https://github.com/bwvdnbro/CMacIonize", - "rel": "/software/repository/github/bwvdnbro/CMacIonize", - "avatar": "https://avatars.githubusercontent.com/u/7336967?v=4", - "description": "C++ Monte Carlo photoionization and radiation hydrodynamics code.", + "uid": "github/tekpinar/correlationplus", + "url": "https://github.com/tekpinar/correlationplus", + "rel": "/software/repository/github/tekpinar/correlationplus", + "avatar": "https://avatars1.githubusercontent.com/u/13648079?v=4", + "description": "A Python package to calculate, visualize and analyze dynamical correlations of proteins.", "topics": [ - "simulation", - "radiative-transfer", - "hydrodynamics", - "post-processing" + "bioinformatics", + "proteins", + "dynamics", + "correlations", + "visualization", + "analysis", + "graph", + "network", + "centrality", + "diffmap" ] }, { - "uid": "github/bwvdnbro/HydroCode1D", - "url": "https://github.com/bwvdnbro/HydroCode1D", - "rel": "/software/repository/github/bwvdnbro/HydroCode1D", - "avatar": "https://avatars.githubusercontent.com/u/7336967?v=4", - "description": "Basic 1D finite volume code that can handle pure 1D problems and problems with 2D and 3D spherical symmetry.", + "uid": "github/ChengF-Lab/AOPEDF", + "url": "https://github.com/ChengF-Lab/AOPEDF", + "rel": "/software/repository/github/ChengF-Lab/AOPEDF", + "avatar": "https://avatars.githubusercontent.com/u/39405991?v=4", + "description": null, "topics": [] }, { - "uid": "github/alexander-shen/rtest", - "url": "https://github.com/alexander-shen/rtest", - "rel": "/software/repository/github/alexander-shen/rtest", - "avatar": "https://avatars.githubusercontent.com/u/17458053?v=4", - "description": "Robust tests of randomness adapted from different sources", - "topics": [] + "uid": "github/iraf-community/pyraf", + "url": "https://github.com/iraf-community/pyraf", + "rel": "/software/repository/github/iraf-community/pyraf", + "avatar": "https://avatars.githubusercontent.com/u/39551906?v=4", + "description": "Command language for IRAF based on Python.", + "topics": [ + "iraf", + "python", + "astronomy", + "pyraf" + ] }, { - "uid": "github/asancpt/caffsim", - "url": "https://github.com/asancpt/caffsim", - "rel": "/software/repository/github/asancpt/caffsim", - "avatar": "https://avatars.githubusercontent.com/u/25226054?v=4", - "description": "R package for simulation of caffeine concentration . https://asancpt.github.io/caffsim", + "uid": "github/iraf-community/iraf", + "url": "https://github.com/iraf-community/iraf", + "rel": "/software/repository/github/iraf-community/iraf", + "avatar": "https://avatars.githubusercontent.com/u/39551906?v=4", + "description": "IRAF - Image Reduction and Analysis Facility", "topics": [ - "pharmacometrics", - "monte-carlo-simulation", - "medicine", - "caffeine", - "toxicology", - "pharmacokinetics" + "astronomy", + "iraf" ] }, { - "uid": "github/wen-jams/bsavi", - "url": "https://github.com/wen-jams/bsavi", - "rel": "/software/repository/github/wen-jams/bsavi", - "avatar": "https://avatars.githubusercontent.com/u/40677090?v=4", - "description": "Interactive visualizer for high-dimensional datasets and observables.", + "uid": "github/fkeruzore/halox", + "url": "https://github.com/fkeruzore/halox", + "rel": "/software/repository/github/fkeruzore/halox", + "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", + "description": "Dark matter halo properties and halo mass functions using JAX", "topics": [] }, { - "uid": "github/LukeDuttweiler/skipTrack", - "url": "https://github.com/LukeDuttweiler/skipTrack", - "rel": "/software/repository/github/LukeDuttweiler/skipTrack", - "avatar": "https://avatars.githubusercontent.com/u/55801931?v=4", - "description": "Bayesian Hierarchical Models for Identifying Non-Adherence in Mobile Menstrual Cycle Tracking", + "uid": "github/fkeruzore/picasso", + "url": "https://github.com/fkeruzore/picasso", + "rel": "/software/repository/github/fkeruzore/picasso", + "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", + "description": "Painting intracluster gas on gravity-only simulations, using JAX and flax", "topics": [] }, { - "uid": "github/multiscale/muscle3", - "url": "https://github.com/multiscale/muscle3", - "rel": "/software/repository/github/multiscale/muscle3", - "avatar": "https://avatars3.githubusercontent.com/u/34157084?v=4", - "description": "The third major version of the MUltiScale Coupling Library and Environment", + "uid": "github/fkeruzore/panco2", + "url": "https://github.com/fkeruzore/panco2", + "rel": "/software/repository/github/fkeruzore/panco2", + "avatar": "https://avatars.githubusercontent.com/u/26671073?v=4", + "description": "A Python library for pressure profile measurements in SZ observations of galaxy clusters.", "topics": [] }, { - "uid": "github/AstroUGent/shadowfax", - "url": "https://github.com/AstroUGent/shadowfax", - "rel": "/software/repository/github/AstroUGent/shadowfax", - "avatar": "https://avatars.githubusercontent.com/u/16303138?v=4", - "description": "A public moving mesh hydrodynamical integration code, including gravity and a collisionless component.", + "uid": "github/gmzsebastian/FLEET", + "url": "https://github.com/gmzsebastian/FLEET", + "rel": "/software/repository/github/gmzsebastian/FLEET", + "avatar": "https://avatars.githubusercontent.com/u/10391602?v=4", + "description": "Finding Luminous and Exotic Extragalactic Transients", "topics": [] }, { - "uid": "github/Yunzheng168/PANCAKE", - "url": "https://github.com/Yunzheng168/PANCAKE", - "rel": "/software/repository/github/Yunzheng168/PANCAKE", - "avatar": "https://avatars.githubusercontent.com/u/169057934?v=4", - "description": "Python bAsed Numerical Color-magnitude-diagram Analysis pacKagE", - "topics": [] + "uid": "github/tudelft3d/3dfier", + "url": "https://github.com/tudelft3d/3dfier", + "rel": "/software/repository/github/tudelft3d/3dfier", + "avatar": "https://avatars.githubusercontent.com/u/1544391?v=4", + "description": "The open-source tool for creating of 3D models", + "topics": [ + "3dgis", + "gis", + "citygml", + "lidar", + "laz", + "cityjson", + "yaml-cpp", + "3d" + ] }, { - "uid": "github/lemene/PECAT", - "url": "https://github.com/lemene/PECAT", - "rel": "/software/repository/github/lemene/PECAT", - "avatar": "https://avatars.githubusercontent.com/u/22316379?v=4", - "description": "PECAT, a phased error correct and assembly tool", - "topics": [] + "uid": "github/loosolab/TOBIAS", + "url": "https://github.com/loosolab/TOBIAS", + "rel": "/software/repository/github/loosolab/TOBIAS", + "avatar": "https://avatars.githubusercontent.com/u/12712804?v=4", + "description": "Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal ", + "topics": [ + "bioinformatics", + "atac-seq", + "footprinting" + ] }, { - "uid": "github/Martindelosrios/cosmic-kite", - "url": "https://github.com/Martindelosrios/cosmic-kite", - "rel": "/software/repository/github/Martindelosrios/cosmic-kite", - "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", - "description": null, + "uid": "github/lorenaacuna/GASTLI", + "url": "https://github.com/lorenaacuna/GASTLI", + "rel": "/software/repository/github/lorenaacuna/GASTLI", + "avatar": "https://avatars.githubusercontent.com/u/66270562?v=4", + "description": "GAS gianT modeL for Interiors", "topics": [] }, { - "uid": "github/Martindelosrios/ROGER", - "url": "https://github.com/Martindelosrios/ROGER", - "rel": "/software/repository/github/Martindelosrios/ROGER", - "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", - "description": null, + "uid": "github/tlambert03/pycudadecon", + "url": "https://github.com/tlambert03/pycudadecon", + "rel": "/software/repository/github/tlambert03/pycudadecon", + "avatar": "https://avatars.githubusercontent.com/u/1609449?v=4", + "description": "Python wrapper for cudaDecon - GPU accelerated 3D deconvolution for microscopy", "topics": [] }, { - "uid": "github/Martindelosrios/MeSsI", - "url": "https://github.com/Martindelosrios/MeSsI", - "rel": "/software/repository/github/Martindelosrios/MeSsI", - "avatar": "https://avatars.githubusercontent.com/u/18489439?v=4", - "description": null, + "uid": "github/fkiwy/Finder_charts", + "url": "https://github.com/fkiwy/Finder_charts", + "rel": "/software/repository/github/fkiwy/Finder_charts", + "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", + "description": "A Python module to create finder charts from image data of various sky surveys", "topics": [] }, { - "uid": "github/fatmasevinck/enetLTS", - "url": "https://github.com/fatmasevinck/enetLTS", - "rel": "/software/repository/github/fatmasevinck/enetLTS", - "avatar": "https://avatars.githubusercontent.com/u/98884658?v=4", - "description": "Robust and sparse methods for high diemnsional data including gaussian, binomial and multinomial families", + "uid": "github/fkiwy/unTimely_Catalog_explorer", + "url": "https://github.com/fkiwy/unTimely_Catalog_explorer", + "rel": "/software/repository/github/fkiwy/unTimely_Catalog_explorer", + "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", + "description": "A search and visualization tool for the unTimely Catalog", "topics": [] }, { - "uid": "github/esplint/IRACpm", - "url": "https://github.com/esplint/IRACpm", - "rel": "/software/repository/github/esplint/IRACpm", - "avatar": "https://avatars.githubusercontent.com/u/15931750?v=4", - "description": "IRACpm R Package: Applies a 7-8 order distortion correction to IRAC astrometric data from the Spitzer Space Telescope", + "uid": "github/fkiwy/AstroToolBox", + "url": "https://github.com/fkiwy/AstroToolBox", + "rel": "/software/repository/github/fkiwy/AstroToolBox", + "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", + "description": "Java tool set for the identification and classification of astronomical objects with a focus on low-mass stars and ultra-cool dwarfs", "topics": [] }, { - "uid": "github/cosmodesi/pycorr", - "url": "https://github.com/cosmodesi/pycorr", - "rel": "/software/repository/github/cosmodesi/pycorr", - "avatar": "https://avatars.githubusercontent.com/u/8990486?v=4", - "description": "2-pt correlation function estimation", + "uid": "github/cjbarrie/academictwitteR", + "url": "https://github.com/cjbarrie/academictwitteR", + "rel": "/software/repository/github/cjbarrie/academictwitteR", + "avatar": "https://avatars.githubusercontent.com/u/29574597?v=4", + "description": "Repo for academictwitteR package to query the Twitter Academic Research Product Track v2 API endpoint.", "topics": [] }, { - "uid": "github/mlysy/LocalCop", - "url": "https://github.com/mlysy/LocalCop", - "rel": "/software/repository/github/mlysy/LocalCop", - "avatar": "https://avatars.githubusercontent.com/u/10173557?v=4", - "description": "Local Likelihood Inference for Conditional Copulas", + "uid": "github/ilaudy/PIAO", + "url": "https://github.com/ilaudy/PIAO", + "rel": "/software/repository/github/ilaudy/PIAO", + "avatar": "https://avatars.githubusercontent.com/u/3382703?v=4", + "description": "PIAO (\u6f02) is efficient memory-controlled python code using the standard SO algorithm to identify halos.", "topics": [] }, { - "uid": "github/Materials-Consortia/OPTIMADE-Filter", - "url": "https://github.com/Materials-Consortia/OPTIMADE-Filter", - "rel": "/software/repository/github/Materials-Consortia/OPTIMADE-Filter", - "avatar": "https://avatars.githubusercontent.com/u/23107754?v=4", - "description": "OPTIMADE filter language parser in Perl", + "uid": "github/ArnaudCassan/microlensing", + "url": "https://github.com/ArnaudCassan/microlensing", + "rel": "/software/repository/github/ArnaudCassan/microlensing", + "avatar": "https://avatars.githubusercontent.com/u/25842440?v=4", + "description": "Gravitational microlensing", "topics": [ - "perl5", - "optimade", - "parser" + "microlensing", + "astronomy", + "numerical-computation", + "caustics", + "critical-curves" ] }, { - "uid": "github/Materials-Consortia/optimade-python-tools", - "url": "https://github.com/Materials-Consortia/optimade-python-tools", - "rel": "/software/repository/github/Materials-Consortia/optimade-python-tools", - "avatar": "https://avatars.githubusercontent.com/u/23107754?v=4", - "description": "Tools for implementing and consuming OPTIMADE APIs in Python", + "uid": "github/ViennaRNA/RNAblueprint", + "url": "https://github.com/ViennaRNA/RNAblueprint", + "rel": "/software/repository/github/ViennaRNA/RNAblueprint", + "avatar": "https://avatars.githubusercontent.com/u/22776520?v=4", + "description": "RNAblueprint library for uniform sampling of RNA sequences given structural and sequence constraints", "topics": [ - "optimade-specification", - "optimade-python", - "optimade-api", - "openapi", - "python" + "rnablueprint-library", + "riboswitch", + "design", + "rna-design", + "inverse-folding", + "rna-structure", + "viennarna", + "nupack" ] }, { - "uid": "github/cersonsky-lab/AniSOAP", - "url": "https://github.com/cersonsky-lab/AniSOAP", - "rel": "/software/repository/github/cersonsky-lab/AniSOAP", - "avatar": "https://avatars.githubusercontent.com/u/114077954?v=4", - "description": "Library for computing anisotropy extension to SOAP descriptors", - "topics": [] - }, - { - "uid": "github/mtceballos/SIRENAdoc", - "url": "https://github.com/mtceballos/SIRENAdoc", - "rel": "/software/repository/github/mtceballos/SIRENAdoc", - "avatar": "https://avatars.githubusercontent.com/u/7905495?v=4", - "description": "SIRENA documentation", - "topics": [] - }, - { - "uid": "github/astrobrent/mappings", - "url": "https://github.com/astrobrent/mappings", - "rel": "/software/repository/github/astrobrent/mappings", - "avatar": "https://avatars.githubusercontent.com/u/3286205?v=4", - "description": "MAPPINGSIII repository", - "topics": [] - }, - { - "uid": "github/astrobrent/itera", - "url": "https://github.com/astrobrent/itera", - "rel": "/software/repository/github/astrobrent/itera", - "avatar": "https://avatars.githubusercontent.com/u/3286205?v=4", - "description": "ITERA: IDL line ratio tool", - "topics": [] + "uid": "github/a-griffiths/AutoSpec", + "url": "https://github.com/a-griffiths/AutoSpec", + "rel": "/software/repository/github/a-griffiths/AutoSpec", + "avatar": "https://avatars.githubusercontent.com/u/26306805?v=4", + "description": "Fast Automated Spectral Extraction Software for IFU Datacubes", + "topics": [ + "cross-correlation", + "spectra", + "datacube", + "astronomy", + "muse", + "automated", + "ifu" + ] }, { - "uid": "github/galaxy001/pirs", - "url": "https://github.com/galaxy001/pirs", - "rel": "/software/repository/github/galaxy001/pirs", - "avatar": "https://avatars.githubusercontent.com/u/863605?v=4", - "description": "profile basd Illumina pair-end Reads Simulator", + "uid": "github/matchms/ms2deepscore", + "url": "https://github.com/matchms/ms2deepscore", + "rel": "/software/repository/github/matchms/ms2deepscore", + "avatar": "https://avatars.githubusercontent.com/u/62389017?v=4", + "description": "Deep learning similarity measure for comparing MS/MS spectra with respect to their chemical similarity", "topics": [] }, { - "uid": "github/Kushaalkumar-pothula/FLARE", - "url": "https://github.com/Kushaalkumar-pothula/FLARE", - "rel": "/software/repository/github/Kushaalkumar-pothula/FLARE", - "avatar": "https://avatars.githubusercontent.com/u/66947837?v=4", - "description": "Generates a synthetic Fast Radio Burst catalog, using the Monte Carlo technique.", + "uid": "github/matchms/matchms", + "url": "https://github.com/matchms/matchms", + "rel": "/software/repository/github/matchms/matchms", + "avatar": "https://avatars0.githubusercontent.com/u/62389017?v=4", + "description": "Python library for fuzzy comparison of mass spectrum data and other Python objects", "topics": [ - "astrophysics", - "monte-carlo-simulation" + "python3", + "similarity-measures", + "mass-spectrometry", + "fuzzy-matching", + "fuzzy-search" ] }, { - "uid": "github/pylops/pyproximal", - "url": "https://github.com/PyLops/pyproximal", - "rel": "/software/repository/github/pylops/pyproximal", - "avatar": "https://avatars.githubusercontent.com/u/74298005?v=4", - "description": "PyProximal \u2013 Proximal Operators and Algorithms in Python", + "uid": "github/chrisfinlay/tabascal", + "url": "https://github.com/chrisfinlay/tabascal", + "rel": "/software/repository/github/chrisfinlay/tabascal", + "avatar": "https://avatars.githubusercontent.com/u/18262727?v=4", + "description": "TrAjectory BAsed RFI Subtraction and CALibration (TABASCAL) of radio interferometry data. A source to visibility model for astronomical and RFI sources including near-field effects. Visibility data is jointly calibrated with excision of specific RFI contamination.", "topics": [ - "proximal-algorithms", - "linear-algebra", - "inverse-problems", - "python" + "radio-astronomy", + "radio-frequency-interference", + "radio-interferometry", + "lofar", + "meerkat", + "rfi-mitigation", + "rfi-removal", + "satellite", + "ska-telescope", + "gpu" ] }, { - "uid": "github/openscm/openscm-twolayermodel", - "url": "https://github.com/openscm/openscm-twolayermodel", - "rel": "/software/repository/github/openscm/openscm-twolayermodel", - "avatar": "https://avatars.githubusercontent.com/u/62363211?v=4", - "description": "Implementations of two-layer models by Held et al. and Geoffroy et al.", + "uid": "github/1054/Crab.Toolkit.michi2", + "url": "https://github.com/1054/Crab.Toolkit.michi2", + "rel": "/software/repository/github/1054/Crab.Toolkit.michi2", + "avatar": "https://avatars.githubusercontent.com/u/6521499?v=4", + "description": "crab minimum chi2 toolkit", "topics": [] }, { - "uid": "github/dirmeier/surjectors", - "url": "https://github.com/dirmeier/surjectors", - "rel": "/software/repository/github/dirmeier/surjectors", - "avatar": "https://avatars.githubusercontent.com/u/16086606?v=4", - "description": "Surjection layers for density estimation with normalizing flows", + "uid": "github/3fon3fonov/exostriker", + "url": "https://github.com/3fon3fonov/exostriker", + "rel": "/software/repository/github/3fon3fonov/exostriker", + "avatar": "https://avatars.githubusercontent.com/u/44244057?v=4", + "description": "Transit and Radial velocity Interactive Fitting tool for Orbital analysis and N-body simulations: The Exo-Striker", "topics": [ - "normalizing-flows", - "python", - "surjections", - "density-estimation", - "bijections" + "exoplanet", + "exoplanets", + "periodogram", + "radial-velocity", + "transit-modeling", + "ttv-modeling", + "multi-planet-systems" ] }, { - "uid": "github/lnasellentin/DALI", - "url": "https://github.com/Lnasellentin/DALI", - "rel": "/software/repository/github/lnasellentin/DALI", - "avatar": "https://avatars.githubusercontent.com/u/11210388?v=4", - "description": "Non-Gaussian Likelihood Approximations", + "uid": "github/firefly-cpp/NiaARM", + "url": "https://github.com/firefly-cpp/NiaARM", + "rel": "/software/repository/github/firefly-cpp/NiaARM", + "avatar": "https://avatars.githubusercontent.com/u/1633361?v=4", + "description": "A minimalistic framework for Numerical Association Rule Mining", + "topics": [ + "data-science", + "data-mining", + "association-rules", + "association-rule-mining", + "evolutionary-algorithms", + "swarm-intelligence" + ] + }, + { + "uid": "github/quanted/esat", + "url": "https://github.com/quanted/esat", + "rel": "/software/repository/github/quanted/esat", + "avatar": "https://avatars.githubusercontent.com/u/16341712?v=4", + "description": "EPA's Environmental Source Apportionment Toolkit (ESAT) python package", "topics": [] }, { - "uid": "github/scipy/scipy", - "url": "https://github.com/scipy/scipy", - "rel": "/software/repository/github/scipy/scipy", - "avatar": "https://avatars2.githubusercontent.com/u/288277?v=4", - "description": "Scipy library main repository", + "uid": "github/LiyrAstroph/RECON", + "url": "https://github.com/LiyrAstroph/RECON", + "rel": "/software/repository/github/LiyrAstroph/RECON", + "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", + "description": "A method for measuring spectral power and reconstructing time series in active galactic nuclei", "topics": [] }, { - "uid": "github/spacepy/spacepy", - "url": "https://github.com/spacepy/spacepy", - "rel": "/software/repository/github/spacepy/spacepy", - "avatar": "https://avatars.githubusercontent.com/u/2671009?v=4", - "description": "Space Science library for Python - contains superposed epoch classes, drift shell tracing, access to magnetic field models, streamline tracing, bootstrap confidence limits, time and coordinate conversions, etc.", - "topics": [ - "python", - "python2", - "python3", - "space", - "coordinates", - "batsrus", - "swmf", - "cdf" - ] + "uid": "github/LiyrAstroph/BRAINS", + "url": "https://github.com/LiyrAstroph/BRAINS", + "rel": "/software/repository/github/LiyrAstroph/BRAINS", + "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", + "description": "A package for dynamically modeling broad-line regions in active galactic nucleus, analyzing reverberation-mapping and spectro-astrometric data, and measuring the central black hole mass", + "topics": [] }, { - "uid": "github/alexlewin24/BLSEM", - "url": "https://github.com/alexlewin24/BLSEM", - "rel": "/software/repository/github/alexlewin24/BLSEM", - "avatar": "https://avatars.githubusercontent.com/u/52714163?v=4", - "description": "R package for Bayesian Path Analysis with Variable Selection", + "uid": "github/LiyrAstroph/PyCALI", + "url": "https://github.com/LiyrAstroph/PyCALI", + "rel": "/software/repository/github/LiyrAstroph/PyCALI", + "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", + "description": "A Python package to intercalibrate light curves. ", "topics": [] }, { - "uid": "github/huanghua1994/HiGP", - "url": "https://github.com/huanghua1994/HiGP", - "rel": "/software/repository/github/huanghua1994/HiGP", - "avatar": "https://avatars.githubusercontent.com/u/22476972?v=4", - "description": null, + "uid": "github/LiyrAstroph/PIXON", + "url": "https://github.com/LiyrAstroph/PIXON", + "rel": "/software/repository/github/LiyrAstroph/PIXON", + "avatar": "https://avatars.githubusercontent.com/u/22761518?v=4", + "description": "a pixon-based method for reverberation mapping analysis in active galactic nuclei", "topics": [] }, { - "uid": "github/sylabs/singularity", - "url": "https://github.com/sylabs/singularity", - "rel": "/software/repository/github/sylabs/singularity", - "avatar": "https://avatars.githubusercontent.com/u/32401844?v=4", - "description": "SingularityCE is the Community Edition of Singularity, an open source container platform designed to be simple, fast, and secure.", + "uid": "github/AstroChem/VISIBLE", + "url": "https://github.com/AstroChem/VISIBLE", + "rel": "/software/repository/github/AstroChem/VISIBLE", + "avatar": "https://avatars.githubusercontent.com/u/11094466?v=4", + "description": "VISIbility Based Line Extraction", + "topics": [] + }, + { + "uid": "github/aslan-ng/keepdelta", + "url": "https://github.com/aslan-ng/keepdelta", + "rel": "/software/repository/github/aslan-ng/keepdelta", + "avatar": "https://avatars.githubusercontent.com/u/42834665?v=4", + "description": "A Python Library for Human-Readable Data Differencing", "topics": [ - "containers", - "hpc", - "linux" + "data-structures", + "delta-compression", + "delta-encoding", + "python", + "sensing", + "simulation", + "change-tracking", + "diff", + "data-differencing", + "differential-compression", + "human-readable", + "nested", + "reconstruction", + "keepdelta", + "recursive" ] }, { - "uid": "github/PDBeurope/pdb-images", - "url": "https://github.com/PDBeurope/pdb-images", - "rel": "/software/repository/github/PDBeurope/pdb-images", - "avatar": "https://avatars.githubusercontent.com/u/8808449?v=4", - "description": "Generates images from mmCIF/BCIF files", + "uid": "github/bge-barcoding/gene_fetch", + "url": "https://github.com/bge-barcoding/gene_fetch", + "rel": "/software/repository/github/bge-barcoding/gene_fetch", + "avatar": "https://avatars.githubusercontent.com/u/157588017?v=4", + "description": "A Python tool for high-throughput retrieval of protein and/or gene sequences from NCBI GenBank for single or multiple taxa.", "topics": [] }, { - "uid": "github/OpenHPS/openhps-core", - "url": "https://github.com/OpenHPS/openhps-core", - "rel": "/software/repository/github/OpenHPS/openhps-core", - "avatar": "https://avatars.githubusercontent.com/u/64551958?v=4", - "description": "OpenHPS: Core Component", + "uid": "github/aiidateam/kiwipy", + "url": "https://github.com/aiidateam/kiwipy", + "rel": "/software/repository/github/aiidateam/kiwipy", + "avatar": "https://avatars3.githubusercontent.com/u/22181836?v=4", + "description": "A python messaging library for RPC, task queues and broadcasts", "topics": [] }, { - "uid": "github/CITCOM-project/CausalTestingFramework", - "url": "https://github.com/CITCOM-project/CausalTestingFramework", - "rel": "/software/repository/github/CITCOM-project/CausalTestingFramework", - "avatar": "https://avatars.githubusercontent.com/u/76901837?v=4", - "description": "A causal inference-driven framework for functional black-box testing of complex software.", - "topics": [] + "uid": "github/aiidateam/aiida-core", + "url": "https://github.com/aiidateam/aiida-core", + "rel": "/software/repository/github/aiidateam/aiida-core", + "avatar": "https://avatars3.githubusercontent.com/u/22181836?v=4", + "description": "The official repository for the AiiDA code", + "topics": [ + "aiida", + "workflow", + "workflow-engine", + "provenance", + "database", + "ssh", + "scheduler", + "query-builder" + ] }, { - "uid": "github/FabioRigamonti/pyADfit", - "url": "https://github.com/FabioRigamonti/pyADfit", - "rel": "/software/repository/github/FabioRigamonti/pyADfit", - "avatar": "https://avatars.githubusercontent.com/u/65313023?v=4", - "description": "A nested sampling approach to QSO accretion disc fitting.", - "topics": [] + "uid": "github/cmbant/getdist", + "url": "https://github.com/cmbant/getdist", + "rel": "/software/repository/github/cmbant/getdist", + "avatar": "https://avatars.githubusercontent.com/u/3958819?v=4", + "description": "MCMC sample analysis, kernel densities, plotting, and GUI", + "topics": [ + "kernel-density-estimation", + "plotting-in-python", + "mcmc", + "statistical-inference", + "contour-plot", + "sampling-methods" + ] }, { - "uid": "github/GENtle-persons/gentle-m", - "url": "https://github.com/GENtle-persons/gentle-m", - "rel": "/software/repository/github/GENtle-persons/gentle-m", - "avatar": "https://avatars.githubusercontent.com/u/141044235?v=4", - "description": null, + "uid": "github/EBI-Metagenomics/EukCC", + "url": "https://github.com/EBI-Metagenomics/EukCC", + "rel": "/software/repository/github/EBI-Metagenomics/EukCC", + "avatar": "https://avatars.githubusercontent.com/u/32897658?v=4", + "description": " Tool to estimate genome quality of microbial eukaryotes ", "topics": [] }, { - "uid": "github/s2mLab/pyScienceMode", - "url": "https://github.com/s2mLab/pyScienceMode", - "rel": "/software/repository/github/s2mLab/pyScienceMode", - "avatar": "https://avatars.githubusercontent.com/u/38570329?v=4", + "uid": "github/RangamaniLabUCSD/smart", + "url": "https://github.com/RangamaniLabUCSD/smart", + "rel": "/software/repository/github/RangamaniLabUCSD/smart", + "avatar": "https://avatars.githubusercontent.com/u/58951527?v=4", "description": null, "topics": [] }, { - "uid": "github/sarrvesh/cuFFS", - "url": "https://github.com/sarrvesh/cuFFS", - "rel": "/software/repository/github/sarrvesh/cuFFS", - "avatar": "https://avatars.githubusercontent.com/u/8722194?v=4", - "description": "A GPU-accelerated Rotation Measure Synthesis code", + "uid": "github/IFB-ElixirFr/edam-browser", + "url": "https://github.com/IFB-ElixirFr/edam-browser", + "rel": "/software/repository/github/IFB-ElixirFr/edam-browser", + "avatar": "https://avatars3.githubusercontent.com/u/24292199?v=4", + "description": "Stand alone js browser for EDAM Ontology", "topics": [] }, { - "uid": "github/vojtech-sidorin/quickclump", - "url": "https://github.com/vojtech-sidorin/quickclump", - "rel": "/software/repository/github/vojtech-sidorin/quickclump", - "avatar": "https://avatars.githubusercontent.com/u/10384347?v=4", - "description": "Identify clumps within a 3D FITS datacube.", + "uid": "github/shengjin/nii-c", + "url": "https://github.com/shengjin/nii-c", + "rel": "/software/repository/github/shengjin/nii-c", + "avatar": "https://avatars.githubusercontent.com/u/10437909?v=4", + "description": "The Nii-C code", "topics": [] }, { - "uid": "github/changhoonhahn/pySpectrum", - "url": "https://github.com/changhoonhahn/pySpectrum", - "rel": "/software/repository/github/changhoonhahn/pySpectrum", - "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", - "description": "python package to measure power spectrum and bispectrum", - "topics": [ - "cosmology", - "astrostatistics" - ] - }, - { - "uid": "github/changhoonhahn/haloflow", - "url": "https://github.com/changhoonhahn/haloflow", - "rel": "/software/repository/github/changhoonhahn/haloflow", - "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", - "description": "Simulation-Based Inference (SBI) using forward modeled galaxy photometry", + "uid": "github/shengjin/Nii", + "url": "https://github.com/shengjin/Nii", + "rel": "/software/repository/github/shengjin/Nii", + "avatar": "https://avatars.githubusercontent.com/u/10437909?v=4", + "description": "The Nii code", "topics": [] }, { - "uid": "github/changhoonhahn/provabgs", - "url": "https://github.com/changhoonhahn/provabgs", - "rel": "/software/repository/github/changhoonhahn/provabgs", - "avatar": "https://avatars.githubusercontent.com/u/1895640?v=4", - "description": "PRObabilistic Value-Added Bright Galaxy Survey (PROVABGS)", + "uid": "github/ntlucia/BrownDwarf-SpectralIndices", + "url": "https://github.com/ntlucia/BrownDwarf-SpectralIndices", + "rel": "/software/repository/github/ntlucia/BrownDwarf-SpectralIndices", + "avatar": "https://avatars.githubusercontent.com/u/26672990?v=4", + "description": "Method to determine if a brown dwarf is a candidate to be a photometric variable or not, by means of the study of spectral indices.", "topics": [] }, { - "uid": "github/lxvm/AutoBZ.jl", - "url": "https://github.com/lxvm/AutoBZ.jl", - "rel": "/software/repository/github/lxvm/AutoBZ.jl", - "avatar": "https://avatars.githubusercontent.com/u/66997677?v=4", - "description": "Automatic and adaptive BZ integration for electronic properties", + "uid": "github/chapmanb/bcbio.variation", + "url": "https://github.com/chapmanb/bcbio.variation", + "rel": "/software/repository/github/chapmanb/bcbio.variation", + "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", + "description": "Toolkit to analyze genomic variation data, built on the GATK with Clojure", "topics": [] }, { - "uid": "github/hjens/lasso_spectra", - "url": "https://github.com/hjens/lasso_spectra", - "rel": "/software/repository/github/hjens/lasso_spectra", - "avatar": "https://avatars.githubusercontent.com/u/966343?v=4", - "description": "Functions for predicting properties from galaxy spectra, using Lasso regression", + "uid": "github/chapmanb/bcbio.prioritize", + "url": "https://github.com/chapmanb/bcbio.prioritize", + "rel": "/software/repository/github/chapmanb/bcbio.prioritize", + "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", + "description": "Prioritize small variants, structural variants and coverage based on biological inputs", "topics": [] }, { - "uid": "github/tud-hri/travia", - "url": "https://github.com/tud-hri/travia", - "rel": "/software/repository/github/tud-hri/travia", - "avatar": "https://avatars.githubusercontent.com/u/72570002?v=4", - "description": "a Traffic data Visualization and Annotation tool", + "uid": "github/chapmanb/bcbb", + "url": "https://github.com/chapmanb/bcbb", + "rel": "/software/repository/github/chapmanb/bcbb", + "avatar": "https://avatars.githubusercontent.com/u/39391?v=4", + "description": "Incubator for useful bioinformatics code, primarily in Python and R", "topics": [] }, { - "uid": "github/tud-hri/joan", - "url": "https://github.com/tud-hri/joan", - "rel": "/software/repository/github/tud-hri/joan", - "avatar": "https://avatars.githubusercontent.com/u/72570002?v=4", - "description": "JOAN is an software package that allows to perform human-in-the loop experiments in the open source driving simulator CARLA. JOAN facilitates communication between human input devices and CARLA, the implementation of haptic feedback, systematically storing experiment data, and the automatic execution of experiments with multiple experimental conditions.", + "uid": "github/MesserLab/SLiM", + "url": "https://github.com/MesserLab/SLiM", + "rel": "/software/repository/github/MesserLab/SLiM", + "avatar": "https://avatars.githubusercontent.com/u/10171238?v=4", + "description": "SLiM is a genetically explicit forward simulation software package for population genetics and evolutionary biology. It is highly flexible, with a built-in scripting language, and has a cross-platform graphical modeling environment called SLiMgui.", "topics": [ - "human-in-the-loop", - "experiments", - "driving-simulator" + "slim" ] }, { - "uid": "github/sterinaldi/FIGARO", - "url": "https://github.com/sterinaldi/FIGARO", - "rel": "/software/repository/github/sterinaldi/FIGARO", - "avatar": "https://avatars.githubusercontent.com/u/56389680?v=4", - "description": "Fast Inference for GW Astronomy, Research and Observations", + "uid": "github/lsncibb/microbiomeGWAS", + "url": "https://github.com/lsncibb/microbiomeGWAS", + "rel": "/software/repository/github/lsncibb/microbiomeGWAS", + "avatar": "https://avatars.githubusercontent.com/u/15255156?v=4", + "description": null, "topics": [] }, { - "uid": "github/micbia/SubgridClumping", - "url": "https://github.com/micbia/SubgridClumping", - "rel": "/software/repository/github/micbia/SubgridClumping", - "avatar": "https://avatars.githubusercontent.com/u/42578987?v=4", - "description": null, + "uid": "github/mikhailklassen/protostellar_evolution", + "url": "https://github.com/mikhailklassen/protostellar_evolution", + "rel": "/software/repository/github/mikhailklassen/protostellar_evolution", + "avatar": "https://avatars.githubusercontent.com/u/1656108?v=4", + "description": "Evolves the radius and luminosity of a protostar from formation to a main sequence star", "topics": [] }, { - "uid": "github/jveitchmichaelis/pygadgetreader", - "url": "https://github.com/jveitchmichaelis/pygadgetreader", - "rel": "/software/repository/github/jveitchmichaelis/pygadgetreader", - "avatar": "https://avatars.githubusercontent.com/u/3159591?v=4", - "description": "A mirror of pygadgetreader because BItbucket stopped hosting Mercurial repos (and we needed it now!)", + "uid": "github/hetalang/heta-compiler", + "url": "https://github.com/hetalang/heta-compiler", + "rel": "/software/repository/github/hetalang/heta-compiler", + "avatar": "https://avatars.githubusercontent.com/u/56396891?v=4", + "description": "Software tool for the compilation of Heta-based QSP modeling platform", "topics": [ - "python", - "gadget", - "cosmology" + "pharmacokinetics", + "pharmacometrics", + "pharmacodynamics", + "systems-pharmacology", + "systems-biology" ] }, { - "uid": "github/QuackenbushLab/NetworkDataCompanion", - "url": "https://github.com/QuackenbushLab/NetworkDataCompanion", - "rel": "/software/repository/github/QuackenbushLab/NetworkDataCompanion", - "avatar": "https://avatars.githubusercontent.com/u/13573979?v=4", - "description": "An R library of utilities for performing analyses on TCGA and GTEx data using the Network Zoo", + "uid": "github/RealTimeGenomics/rtg-tools", + "url": "https://github.com/RealTimeGenomics/rtg-tools", + "rel": "/software/repository/github/RealTimeGenomics/rtg-tools", + "avatar": "https://avatars.githubusercontent.com/u/10228299?v=4", + "description": "RTG Tools: Utilities for accurate VCF comparison and manipulation", "topics": [] }, { - "uid": "github/pnnl/interflow", - "url": "https://github.com/pnnl/interflow", - "rel": "/software/repository/github/pnnl/interflow", - "avatar": "https://avatars.githubusercontent.com/u/10872965?v=4", - "description": "A Python package for organizing and calculating cross-sectoral interdependency flow values", + "uid": "github/INCEPTdk/adaptr", + "url": "https://github.com/INCEPTdk/adaptr", + "rel": "/software/repository/github/INCEPTdk/adaptr", + "avatar": "https://avatars.githubusercontent.com/u/82316354?v=4", + "description": "Adaptive Trial Simulator", "topics": [] }, { - "uid": "github/pnnl/HyperNetX", - "url": "https://github.com/pnnl/HyperNetX", - "rel": "/software/repository/github/pnnl/HyperNetX", - "avatar": "https://avatars.githubusercontent.com/u/10872965?v=4", - "description": "Python package for hypergraph analysis and visualization.", - "topics": [ - "hypergraph", - "simplicial-homology", - "property-hypergraphs", - "s-linegraph", - "hypergraphs", - "knowledge-graph", - "python", - "simplicial-complexes" - ] - }, - { - "uid": "github/robashaw/libecpint", - "url": "https://github.com/robashaw/libecpint", - "rel": "/software/repository/github/robashaw/libecpint", - "avatar": "https://avatars.githubusercontent.com/u/24434359?v=4", - "description": "A C++ library for the efficient evaluation of integrals over effective core potentials.", + "uid": "github/astrocaroline/opacity-wizard", + "url": "https://github.com/astrocaroline/opacity-wizard", + "rel": "/software/repository/github/astrocaroline/opacity-wizard", + "avatar": "https://avatars.githubusercontent.com/u/10456842?v=4", + "description": null, "topics": [] }, { - "uid": "github/prashjet/popkinmocks", - "url": "https://github.com/prashjet/popkinmocks", - "rel": "/software/repository/github/prashjet/popkinmocks", - "avatar": "https://avatars.githubusercontent.com/u/34376548?v=4", - "description": "Create mock IFU datacubes for stellar population and kinematic modelling.", - "topics": [ - "astronomy", - "astrophysics", - "datacube", - "galaxy", - "python", - "spectroscopy", - "stellar-kinematics", - "stellar-populations" - ] - }, - { - "uid": "github/Narayana-Rao/SAR-tools", - "url": "https://github.com/Narayana-Rao/PolSAR-tools", - "rel": "/software/repository/github/Narayana-Rao/SAR-tools", - "avatar": "https://avatars.githubusercontent.com/u/50410669?v=4", - "description": "A QGIS plugin to generate polarimetric SAR descriptors.", + "uid": "github/cmzmasek/forester", + "url": "https://github.com/cmzmasek/forester", + "rel": "/software/repository/github/cmzmasek/forester", + "avatar": "https://avatars.githubusercontent.com/u/82889?v=4", + "description": "forester is a collection of open source libraries of Java and Ruby software for phylogenomics and evolutionary biology research", "topics": [ - "polarimetric-sar-data", - "radar-vegetation", - "polarimetric-decompositions", - "sar", - "qgis3-plugin" + "evolution", + "java", + "ruby", + "genomics", + "biology", + "computational-biology", + "phylogenetics", + "visualization", + "phylogenetic-trees" ] }, { - "uid": "github/PimenoffV/biotic", - "url": "https://github.com/PimenoffV/Biotic", - "rel": "/software/repository/github/PimenoffV/biotic", - "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", - "description": "Comprehensive biotic analysis of metagenomes from environmental and aerosol metagenomes.", - "topics": [] - }, - { - "uid": "github/PimenoffV/VIBE", - "url": "https://github.com/PimenoffV/VIBE", - "rel": "/software/repository/github/PimenoffV/VIBE", - "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", - "description": "Visualization of Integrated Biological Exposures (VIBE) from wearable devices.", + "uid": "github/parklab/SCAN2", + "url": "https://github.com/parklab/SCAN2", + "rel": "/software/repository/github/parklab/SCAN2", + "avatar": "https://avatars.githubusercontent.com/u/1216524?v=4", + "description": "SCAN2 is a somatic SNV and indel genotyper for single cells amplified by Primary Template-Directed Amplification (PTA)", "topics": [] }, { - "uid": "github/PimenoffV/Abiotic", - "url": "https://github.com/PimenoffV/Abiotic", - "rel": "/software/repository/github/PimenoffV/Abiotic", - "avatar": "https://avatars.githubusercontent.com/u/56830098?v=4", - "description": "Integration of abiotic environmental chemical data and analysis with biotic infirmation. ", + "uid": "github/parklab/LiRA", + "url": "https://github.com/parklab/LiRA", + "rel": "/software/repository/github/parklab/LiRA", + "avatar": "https://avatars.githubusercontent.com/u/1216524?v=4", + "description": "(Linked Read Analysis) a computational tool for removing amplification artifacts from single-cell DNA sequencing data and estimating mutation rates in single cells.", "topics": [] }, { - "uid": "github/U-Alberta/ADaPT-ML", - "url": "https://github.com/U-Alberta/ADaPT-ML", - "rel": "/software/repository/github/U-Alberta/ADaPT-ML", - "avatar": "https://avatars.githubusercontent.com/u/4491791?v=4", - "description": null, + "uid": "github/rauschenberger/transreg", + "url": "https://github.com/rauschenberger/transreg", + "rel": "/software/repository/github/rauschenberger/transreg", + "avatar": "https://avatars.githubusercontent.com/u/14272654?v=4", + "description": "Transfer learning", "topics": [] }, { - "uid": "github/casacore/casacore", - "url": "https://github.com/casacore/casacore", - "rel": "/software/repository/github/casacore/casacore", - "avatar": "https://avatars.githubusercontent.com/u/11732311?v=4", - "description": "Suite of C++ libraries for radio astronomy data processing", + "uid": "github/rauschenberger/joinet", + "url": "https://github.com/rauschenberger/joinet", + "rel": "/software/repository/github/rauschenberger/joinet", + "avatar": "https://avatars.githubusercontent.com/u/14272654?v=4", + "description": "Multivariate Elastic Net Regression", "topics": [] }, { - "uid": "github/EESI/Complet-Plus", - "url": "https://github.com/EESI/Complet-Plus", - "rel": "/software/repository/github/EESI/Complet-Plus", - "avatar": "https://avatars.githubusercontent.com/u/4440331?v=4", - "description": "Complet-Plus by Rachel Nguyen and Drexel EESI Lab", + "uid": "github/sievers/corrcal", + "url": "https://github.com/sievers/corrcal", + "rel": "/software/repository/github/sievers/corrcal", + "avatar": "https://avatars.githubusercontent.com/u/338830?v=4", + "description": "Calibration Code for Semi-Redundant arrays", "topics": [] }, { - "uid": "github/navasmontilla/CAELUM", - "url": "https://github.com/navasmontilla/CAELUM", - "rel": "/software/repository/github/navasmontilla/CAELUM", - "avatar": "https://avatars.githubusercontent.com/u/45123014?v=4", - "description": "An academic high-order finite-volume solver for the compressible Euler equations and related problems", + "uid": "github/lahovniktadej/gatree", + "url": "https://github.com/lahovniktadej/gatree", + "rel": "/software/repository/github/lahovniktadej/gatree", + "avatar": "https://avatars.githubusercontent.com/u/57890734?v=4", + "description": "Evolutionary decision tree classifier", "topics": [ - "atmospheric-modelling", - "compressible-flows", - "fluid-dynamics", - "numerical-simulation" + "decision-tree", + "machine-learning", + "evolutionary-algorithm", + "genetic-algorithm" ] }, { - "uid": "github/rsnemmen/BCES", - "url": "https://github.com/rsnemmen/BCES", - "rel": "/software/repository/github/rsnemmen/BCES", - "avatar": "https://avatars.githubusercontent.com/u/4562573?v=4", - "description": "Python module for performing linear regression for data with measurement errors and intrinsic scatter", - "topics": [ - "linear-regression", - "python", - "statistics" - ] + "uid": "github/PMBio/spatialde2-paper", + "url": "https://github.com/PMBio/spatialde2-paper", + "rel": "/software/repository/github/PMBio/spatialde2-paper", + "avatar": "https://avatars.githubusercontent.com/u/578044?v=4", + "description": "Code to reproduce the figures (data not included)", + "topics": [] }, { - "uid": "github/Parsl/parsl", - "url": "https://github.com/Parsl/parsl", - "rel": "/software/repository/github/Parsl/parsl", - "avatar": "https://avatars0.githubusercontent.com/u/26490185?v=4", - "description": "Parsl - Parallel Scripting Library", + "uid": "github/PMBio/peer", + "url": "https://github.com/PMBio/peer", + "rel": "/software/repository/github/PMBio/peer", + "avatar": "https://avatars.githubusercontent.com/u/578044?v=4", + "description": "A factor analysis package", "topics": [] }, { - "uid": "github/iontorrent/TS", - "url": "https://github.com/iontorrent/TS", - "rel": "/software/repository/github/iontorrent/TS", - "avatar": "https://avatars.githubusercontent.com/u/1327981?v=4", - "description": "Torrent Suite", - "topics": [] + "uid": "github/qMRLab/qMRLab", + "url": "https://github.com/qMRLab/qMRLab", + "rel": "/software/repository/github/qMRLab/qMRLab", + "avatar": "https://avatars3.githubusercontent.com/u/42773796?v=4", + "description": "Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: a Software for Data Simulation, Analysis and Visualization", + "topics": [ + "mri", + "analysis", + "data-simulation", + "quantitative", + "magnetization", + "relaxometry", + "mapping" + ] }, { - "uid": "github/cc646201081/CircSI-SSL", - "url": "https://github.com/cc646201081/CircSI-SSL", - "rel": "/software/repository/github/cc646201081/CircSI-SSL", - "avatar": "https://avatars.githubusercontent.com/u/56387765?v=4", - "description": null, + "uid": "github/TimothyADavis/KinMSpy", + "url": "https://github.com/TimothyADavis/KinMSpy", + "rel": "/software/repository/github/TimothyADavis/KinMSpy", + "avatar": "https://avatars.githubusercontent.com/u/15347748?v=4", + "description": "A Python version of KinMS (github.com/TimothyADavis/KinMS)", "topics": [] }, { - "uid": "github/grazianoucci/game", - "url": "https://github.com/grazianoucci/game", - "rel": "/software/repository/github/grazianoucci/game", - "avatar": "https://avatars.githubusercontent.com/u/31356318?v=4", - "description": "GAlaxy Machine learning for Emission lines", + "uid": "github/TimothyADavis/GAStimator", + "url": "https://github.com/TimothyADavis/GAStimator", + "rel": "/software/repository/github/TimothyADavis/GAStimator", + "avatar": "https://avatars.githubusercontent.com/u/15347748?v=4", + "description": "Implementation of a Python MCMC gibbs-sampler with adaptive stepping", "topics": [] }, { - "uid": "github/grazianoucci/cosmic_variance", - "url": "https://github.com/grazianoucci/cosmic_variance", - "rel": "/software/repository/github/grazianoucci/cosmic_variance", - "avatar": "https://avatars.githubusercontent.com/u/31356318?v=4", - "description": null, + "uid": "github/ucberkeleyseti/turbo_seti", + "url": "https://github.com/UCBerkeleySETI/turbo_seti", + "rel": "/software/repository/github/ucberkeleyseti/turbo_seti", + "avatar": "https://avatars.githubusercontent.com/u/1209848?v=4", + "description": "turboSETI -- python based SETI search algorithm.", "topics": [] }, { - "uid": "github/aritrachakrabarty/GPS", - "url": "https://github.com/aritrachakrabarty/GPS", - "rel": "/software/repository/github/aritrachakrabarty/GPS", - "avatar": "https://avatars.githubusercontent.com/u/17982881?v=4", - "description": null, + "uid": "github/ucberkeleyseti/blimpy", + "url": "https://github.com/UCBerkeleySETI/blimpy", + "rel": "/software/repository/github/ucberkeleyseti/blimpy", + "avatar": "https://avatars.githubusercontent.com/u/1209848?v=4", + "description": "Breakthrough Listen I/O Methods for Python", "topics": [] }, { - "uid": "github/Climdyn/qgs", - "url": "https://github.com/Climdyn/qgs", - "rel": "/software/repository/github/Climdyn/qgs", - "avatar": "https://avatars0.githubusercontent.com/u/17494336?v=4", - "description": "A 2-layer quasi-geostrophic atmospheric model in Python. Can be coupled to a simple land or shallow-water ocean component.", + "uid": "github/sibirrer/hierArc", + "url": "https://github.com/sibirrer/hierArc", + "rel": "/software/repository/github/sibirrer/hierArc", + "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", + "description": "Hierarchical inference of cosmological parameters from a set of strong lensing systems", "topics": [ - "atmospheric-models", - "python", - "anaconda", - "meteorology", - "climate-variability", - "numba", - "ocean-atmosphere-model" + "lenstronomy", + "cosmology" ] }, { - "uid": "github/Climdyn/auto-AUTO", - "url": "https://github.com/Climdyn/auto-AUTO", - "rel": "/software/repository/github/Climdyn/auto-AUTO", - "avatar": "https://avatars.githubusercontent.com/u/17494336?v=4", - "description": "An AUTO-07p automatic search algorithm codebase", - "topics": [] + "uid": "github/sibirrer/lenstronomy", + "url": "https://github.com/sibirrer/lenstronomy", + "rel": "/software/repository/github/sibirrer/lenstronomy", + "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", + "description": "multi-purpose lens modeling software package", + "topics": [ + "gravitational-lensing", + "image-simulation", + "lenstronomy", + "astropy-affiliated", + "cosmology", + "astronomy", + "galaxies", + "galaxy-morphology", + "strong-lensing", + "astrophysics" + ] }, { - "uid": "github/tfwillems/HipSTR", - "url": "https://github.com/tfwillems/HipSTR", - "rel": "/software/repository/github/tfwillems/HipSTR", - "avatar": "https://avatars.githubusercontent.com/u/4562953?v=4", - "description": "Genotype and phase short tandem repeats using Illumina whole-genome sequencing data", - "topics": [] + "uid": "github/sibirrer/psfr", + "url": "https://github.com/sibirrer/psfr", + "rel": "/software/repository/github/sibirrer/psfr", + "avatar": "https://avatars.githubusercontent.com/u/6814174?v=4", + "description": "Point Spread Function reconstruction", + "topics": [ + "astronomy", + "psf-estimation", + "lenstronomy" + ] }, { - "uid": "github/USNavalResearchLaboratory/eispac", - "url": "https://github.com/USNavalResearchLaboratory/eispac", - "rel": "/software/repository/github/USNavalResearchLaboratory/eispac", - "avatar": "https://avatars.githubusercontent.com/u/20360572?v=4", - "description": "Read the Docs", + "uid": "github/joglekara/VlaPy", + "url": "https://github.com/joglekara/VlaPy", + "rel": "/software/repository/github/joglekara/VlaPy", + "avatar": "https://avatars1.githubusercontent.com/u/13438206?v=4", + "description": "1D-1V Vlasov-Poisson(-Fokker-Planck) Plasma Physics Simulation Tool", "topics": [] }, { - "uid": "github/YeoLab/FLARE", - "url": "https://github.com/YeoLab/FLARE", - "rel": "/software/repository/github/YeoLab/FLARE", - "avatar": "https://avatars.githubusercontent.com/u/2112324?v=4", - "description": "RNA edit detection (SAILOR) and peak calling (FLARE)", + "uid": "github/ccsosa/GOCompare", + "url": "https://github.com/ccsosa/GOCompare", + "rel": "/software/repository/github/ccsosa/GOCompare", + "avatar": "https://avatars.githubusercontent.com/u/10407841?v=4", + "description": "This is an R package designed to analyze functional enrichment results between two species (A list of genes and their orthologues)", "topics": [] }, { - "uid": "github/YeoLab/clipper", - "url": "https://github.com/YeoLab/clipper", - "rel": "/software/repository/github/YeoLab/clipper", - "avatar": "https://avatars.githubusercontent.com/u/2112324?v=4", - "description": "A tool to detect CLIP-seq peaks.", - "topics": [] + "uid": "github/ctkelley/MultiPrecisionArrays.jl", + "url": "https://github.com/ctkelley/MultiPrecisionArrays.jl", + "rel": "/software/repository/github/ctkelley/MultiPrecisionArrays.jl", + "avatar": "https://avatars.githubusercontent.com/u/10243067?v=4", + "description": "Mulitprecision Arrays", + "topics": [ + "iterative-methods", + "iterative-refinement", + "linear-solvers", + "multiprecision" + ] }, { - "uid": "github/RemieJanssen/phylox", - "url": "https://github.com/RemieJanssen/PhyloX", - "rel": "/software/repository/github/RemieJanssen/phylox", - "avatar": "https://avatars.githubusercontent.com/u/27146369?v=4", - "description": "A python package with tools for constructing, manipulating, and analyzing phylogenetic networks.", + "uid": "github/nhhaidee/WaveSeekerNet", + "url": "https://github.com/nhhaidee/WaveSeekerNet", + "rel": "/software/repository/github/nhhaidee/WaveSeekerNet", + "avatar": "https://avatars.githubusercontent.com/u/30271407?v=4", + "description": null, "topics": [] }, { - "uid": "github/dewberryjanosz/polyrot", - "url": "https://github.com/dewberryjanosz/polyrot", - "rel": "/software/repository/github/dewberryjanosz/polyrot", - "avatar": "https://avatars.githubusercontent.com/u/54084498?v=4", - "description": "A small package for computing polytropic models of rapidly rotating planets and stars", - "topics": [] + "uid": "github/juliotux/astropop", + "url": "https://github.com/juliotux/astropop", + "rel": "/software/repository/github/juliotux/astropop", + "avatar": "https://avatars.githubusercontent.com/u/497246?v=4", + "description": "The (non) famous ASTROnomical POlarimetry and Photometry pipeline", + "topics": [ + "photometry", + "pipeline", + "photometry-pipeline", + "scipy", + "astropy-affiliated", + "astrometry", + "astronomy", + "polarimetry" + ] }, { - "uid": "github/aviadpi/SparseBLS", - "url": "https://github.com/aviadpi/SparseBLS", - "rel": "/software/repository/github/aviadpi/SparseBLS", - "avatar": "https://avatars.githubusercontent.com/u/9414470?v=4", - "description": "BoxFitting Least Squares - Implementation for Sparse data", + "uid": "github/rmpiro/decompTumor2Sig", + "url": "https://github.com/rmpiro/decompTumor2Sig", + "rel": "/software/repository/github/rmpiro/decompTumor2Sig", + "avatar": "https://avatars.githubusercontent.com/u/24794272?v=4", + "description": "decompTumor2Sig - Decomposition of individual tumors into mutational signatures", "topics": [] }, { - "uid": "github/mirnylab/cooler", - "url": "https://github.com/open2c/cooler", - "rel": "/software/repository/github/mirnylab/cooler", - "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", - "description": "is a support library for a sparse, compressed, binary persistent storage format, also called cooler, used to store genomic interaction data, such as Hi-C contact matrices.", + "uid": "github/HUST-NingKang-Lab/ONN4MST", + "url": "https://github.com/HUST-NingKang-Lab/ONN4MST", + "rel": "/software/repository/github/HUST-NingKang-Lab/ONN4MST", + "avatar": "https://avatars.githubusercontent.com/u/24222262?v=4", + "description": "Ontology-aware Neural Network for Mircobiome Data Mining!", "topics": [ - "contact-matrix", - "hdf5", - "python", - "sparse", - "genomics", - "hi-c", - "bioinformatics", - "file-format", - "cooler" + "neural-network", + "microbiome-model", + "ontology-search" ] }, { - "uid": "github/mirnylab/pairtools", - "url": "https://github.com/open2c/pairtools", - "rel": "/software/repository/github/mirnylab/pairtools", - "avatar": "https://avatars.githubusercontent.com/u/70977326?v=4", - "description": "CLI tools to process mapped Hi-C data", - "topics": [] + "uid": "github/rvalieris/parallel-fastq-dump", + "url": "https://github.com/rvalieris/parallel-fastq-dump", + "rel": "/software/repository/github/rvalieris/parallel-fastq-dump", + "avatar": "https://avatars.githubusercontent.com/u/6310472?v=4", + "description": "parallel fastq-dump wrapper", + "topics": [ + "bioinformatics" + ] }, { - "uid": "github/discsim/frank", - "url": "https://github.com/discsim/frank", - "rel": "/software/repository/github/discsim/frank", - "avatar": "https://avatars.githubusercontent.com/u/43750076?v=4", - "description": "1D radial brightness profile reconstruction for interferometric sources", + "uid": "github/rahulshah1397/LADDER", + "url": "https://github.com/rahulshah1397/LADDER", + "rel": "/software/repository/github/rahulshah1397/LADDER", + "avatar": "https://avatars.githubusercontent.com/u/28998141?v=4", + "description": "Public release of LADDER (https://doi.org/10.3847/1538-4365/ad5558) [arXiv: 2401.17029]", "topics": [] }, { - "uid": "github/sdrastro/NWelch", - "url": "https://github.com/sdrastro/NWelch", - "rel": "/software/repository/github/sdrastro/NWelch", - "avatar": "https://avatars.githubusercontent.com/u/11234984?v=4", - "description": "python implementation of Welch's method for estimating the power spectra, complex cross-spectrum, magnitude-squared coherence, and phase spectrum of unevenly spaced, bivariate time series", + "uid": "github/PieterjanRobbe/GaussianRandomFields.jl", + "url": "https://github.com/PieterjanRobbe/GaussianRandomFields.jl", + "rel": "/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", + "avatar": "https://avatars.githubusercontent.com/u/15999604?v=4", + "description": "A package for Gaussian random field generation in Julia", "topics": [] }, { - "uid": "github/DrDaveShaw/INCHEM-Py", - "url": "https://github.com/DrDaveShaw/INCHEM-Py", - "rel": "/software/repository/github/DrDaveShaw/INCHEM-Py", - "avatar": "https://avatars.githubusercontent.com/u/75995570?v=4", - "description": "The INdoor CHEMical model in Python (INCHEM-Py) is an open source and accessible box-model built to give researchers deeper insight into the chemical mechanisms behind indoor air chemistry.", + "uid": "github/BMILAB/scLINE", + "url": "https://github.com/BMILAB/scLINE", + "rel": "/software/repository/github/BMILAB/scLINE", + "avatar": "https://avatars.githubusercontent.com/u/33172581?v=4", + "description": null, "topics": [] }, { - "uid": "github/abschneider/StrainHub", - "url": "https://github.com/abschneider/StrainHub", - "rel": "/software/repository/github/abschneider/StrainHub", - "avatar": "https://avatars0.githubusercontent.com/u/26801239?v=4", - "description": "Welcome to the StrainHub Repo - Files and Data - StrainHub Online:", - "topics": [ - "phylogenetics", - "transmission-network", - "phylogenomics", - "phylogeography" - ] + "uid": "github/DataBiosphere/wdl-parsers", + "url": "https://github.com/DataBiosphere/wdl-parsers", + "rel": "/software/repository/github/DataBiosphere/wdl-parsers", + "avatar": "https://avatars.githubusercontent.com/u/32805087?v=4", + "description": "A package that provides the generated ANTLR4 WDL parsers for Python.", + "topics": [] }, { - "uid": "github/MESAHub/mesa", - "url": "https://github.com/MESAHub/mesa", - "rel": "/software/repository/github/MESAHub/mesa", - "avatar": "https://avatars.githubusercontent.com/u/13661175?v=4", - "description": "Modules for Experiments in Stellar Astrophysics", + "uid": "github/nla-group/fABBA", + "url": "https://github.com/nla-group/fABBA", + "rel": "/software/repository/github/nla-group/fABBA", + "avatar": "https://avatars.githubusercontent.com/u/50701217?v=4", + "description": "A Python library for the fast symbolic approximation of time series", "topics": [ - "stellar-evolution", - "binary-evolution", - "astrophysics", - "astronomy", - "stellar-astrophysics", - "fortran" + "machine-learning", + "dimensionality-reduction", + "time-series", + "time-series-analysis", + "time-series-forecasting", + "time-series-classification", + "time-series-clustering", + "symbolic-aggregate-approximation", + "symbolic-representation" ] }, { - "uid": "github/mne-tools/mne-python", - "url": "https://github.com/mne-tools/mne-python", - "rel": "/software/repository/github/mne-tools/mne-python", - "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", - "description": "MNE: Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python", + "uid": "github/CMU-SAFARI/BLEND", + "url": "https://github.com/CMU-SAFARI/BLEND", + "rel": "/software/repository/github/CMU-SAFARI/BLEND", + "avatar": "https://avatars.githubusercontent.com/u/8065918?v=4", + "description": "BLEND is a mechanism that can efficiently find fuzzy seed matches between sequences to significantly improve the performance and accuracy while reducing the memory space usage of two important applications: 1) finding overlapping reads and 2) read mapping. Described by Firtina et al. (published in NARGAB https://doi.org/10.1093/nargab/lqad004)", "topics": [ - "python", - "neuroscience", - "electroencephalography", - "magnetoencephalography", - "electrocorticography", - "machine-learning", - "statistics", - "visualization", - "eeg", - "meg", - "ecog", - "neuroimaging" + "bioinformatics", + "blend", + "de-novo-assembly", + "genome-analysis", + "genome-assembly", + "minimizers", + "read-mapping", + "strobemers", + "fuzzy-seeds", + "read-overlapping", + "seed-matching", + "spaced-seeds" ] }, { - "uid": "github/mne-tools/mne-icalabel", - "url": "https://github.com/mne-tools/mne-icalabel", - "rel": "/software/repository/github/mne-tools/mne-icalabel", - "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", - "description": "Automatic labeling of ICA components in Python.", + "uid": "github/abatten/fruitbat", + "url": "https://github.com/abatten/fruitbat", + "rel": "/software/repository/github/abatten/fruitbat", + "avatar": "https://avatars.githubusercontent.com/u/24905106?v=4", + "description": "A fast radio burst (FRB) redshift estimation package written in Python.", "topics": [ - "eeg", - "ica", - "neuroscience", - "python" + "frb", + "redshift", + "dispersion", + "measure", + "dm", + "python", + "astronomy", + "astrophysics", + "radio" ] }, { - "uid": "github/mne-tools/mne-lsl", - "url": "https://github.com/mne-tools/mne-lsl", - "rel": "/software/repository/github/mne-tools/mne-lsl", - "avatar": "https://avatars.githubusercontent.com/u/583875?v=4", - "description": "A framework for real-time brain signal streaming with MNE-Python.", + "uid": "github/Hegghammer/daiR", + "url": "https://github.com/Hegghammer/daiR", + "rel": "/software/repository/github/Hegghammer/daiR", + "avatar": "https://avatars.githubusercontent.com/u/64712218?v=4", + "description": "R package for Google Document AI ", "topics": [ - "neuroscience", - "lsl", - "real-time", - "neuroimaging", - "brain", - "labstreaminglayer", - "brain-computer-interfaces", - "network", - "visualisation" + "ocr", + "r", + "google-cloud" ] }, { - "uid": "github/ZjuLiangsl/mmkp", - "url": "https://github.com/ZjuLiangsl/mmkp", - "rel": "/software/repository/github/ZjuLiangsl/mmkp", - "avatar": "https://avatars.githubusercontent.com/u/97502124?v=4", - "description": "A Mind Mapping Knowledgebase Prototyping Tool for Precision Medicine", + "uid": "github/BirkhoffG/jax-relax", + "url": "https://github.com/BirkhoffG/jax-relax", + "rel": "/software/repository/github/BirkhoffG/jax-relax", + "avatar": "https://avatars.githubusercontent.com/u/26811230?v=4", + "description": "Recourse Explanation Library in JAX", "topics": [] }, { - "uid": "github/tornede/py_experimenter", - "url": "https://github.com/tornede/py_experimenter", - "rel": "/software/repository/github/tornede/py_experimenter", - "avatar": "https://avatars.githubusercontent.com/u/47322192?v=4", - "description": "The PyExperimenter is a tool for the automatic execution of experiments, e.g. for machine learning (ML), capturing corresponding results in a unified manner in a database. ", - "topics": [ - "database", - "executor", - "experiments", - "python" - ] - }, - { - "uid": "github/mfem/mfem", - "url": "https://github.com/mfem/mfem", - "rel": "/software/repository/github/mfem/mfem", - "avatar": "https://avatars.githubusercontent.com/u/12879105?v=4", - "description": "Lightweight, general, scalable C++ library for finite element methods", - "topics": [ - "finite-elements", - "high-order", - "high-performance-computing", - "parallel-computing", - "amr", - "computational-science", - "fem", - "scientific-computing", - "hpc", - "math-physics", - "radiuss" - ] + "uid": "github/biolab-unige/nifti2dicom", + "url": "https://github.com/biolab-unige/nifti2dicom", + "rel": "/software/repository/github/biolab-unige/nifti2dicom", + "avatar": "https://avatars.githubusercontent.com/u/1324907?v=4", + "description": "Convert 3D NIfTI images (and other formats supported by ITK) to DICOM 2D series", + "topics": [] }, { - "uid": "github/berenslab/MorphoPy", - "url": "https://github.com/berenslab/MorphoPy", - "rel": "/software/repository/github/berenslab/MorphoPy", - "avatar": "https://avatars3.githubusercontent.com/u/20125525?v=4", - "description": null, + "uid": "github/Crick-CancerGenomics/ascat", + "url": "https://github.com/VanLoo-lab/ascat", + "rel": "/software/repository/github/Crick-CancerGenomics/ascat", + "avatar": "https://avatars.githubusercontent.com/u/11769973?v=4", + "description": "ASCAT copy number R package", "topics": [] }, { - "uid": "github/berenslab/fundus_image_toolbox", - "url": "https://github.com/berenslab/fundus_image_toolbox", - "rel": "/software/repository/github/berenslab/fundus_image_toolbox", - "avatar": "https://avatars.githubusercontent.com/u/20125525?v=4", - "description": "A Python package for fundus image processing.", + "uid": "github/pynbody/genetIC", + "url": "https://github.com/pynbody/genetIC", + "rel": "/software/repository/github/pynbody/genetIC", + "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", + "description": "The GM initial conditions generator", "topics": [] }, { - "uid": "github/theGreatHerrLebert/rustims", - "url": "https://github.com/theGreatHerrLebert/rustims", - "rel": "/software/repository/github/theGreatHerrLebert/rustims", - "avatar": "https://avatars.githubusercontent.com/u/32388991?v=4", - "description": "A Framework for IMS-MS Raw Data Processing written in Rust and Python.", + "uid": "github/pynbody/pynbody", + "url": "https://github.com/pynbody/pynbody", + "rel": "/software/repository/github/pynbody/pynbody", + "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", + "description": "N-body and hydro analysis tools for Python 3. (Older versions support Python 2.)", + "topics": [] + }, + { + "uid": "github/pynbody/tangos", + "url": "https://github.com/pynbody/tangos", + "rel": "/software/repository/github/pynbody/tangos", + "avatar": "https://avatars.githubusercontent.com/u/4417908?v=4", + "description": "The Agile Numerical Galaxy Organisation System", "topics": [ - "bottom-up", - "data-independent-acquisition", - "high-throughput", - "ion-mobility-spectrometry", - "omics", - "proteomics", - "pyo3", "python", - "rust-lang", - "timstof", - "raw-data", - "mass-spectrometry" + "cosmology", + "simulation" ] }, { - "uid": "github/danielkoll/tidally-locked-coordinates", - "url": "https://github.com/danielkoll/tidally-locked-coordinates", - "rel": "/software/repository/github/danielkoll/tidally-locked-coordinates", - "avatar": "https://avatars.githubusercontent.com/u/43180124?v=4", - "description": "Scripts for transforming GCM output into a tidally locked coordinate system.", + "uid": "github/li-shaochuan/SEDIM", + "url": "https://github.com/li-shaochuan/SEDIM", + "rel": "/software/repository/github/li-shaochuan/SEDIM", + "avatar": "https://avatars.githubusercontent.com/u/52021016?v=4", + "description": null, "topics": [] }, { - "uid": "github/danielkoll/PyRADS", - "url": "https://github.com/danielkoll/PyRADS", - "rel": "/software/repository/github/danielkoll/PyRADS", - "avatar": "https://avatars.githubusercontent.com/u/43180124?v=4", - "description": "A line-by-line longwave radiation code for planetary atmospheres.", - "topics": [ - "two-stream", - "longwave", - "line-by-line", - "radiative-transfer", - "radiation", - "atmosphere", - "python", - "olr", - "planetary-atmospheres", - "surface-temperature", - "compute-olrs", - "longwave-radiation" - ] + "uid": "github/hydroframe/hf_hydrodata", + "url": "https://github.com/hydroframe/hf_hydrodata", + "rel": "/software/repository/github/hydroframe/hf_hydrodata", + "avatar": "https://avatars.githubusercontent.com/u/48289869?v=4", + "description": null, + "topics": [] }, { - "uid": "github/freesurfer/freesurfer", - "url": "https://github.com/freesurfer/freesurfer", - "rel": "/software/repository/github/freesurfer/freesurfer", - "avatar": "https://avatars.githubusercontent.com/u/6330653?v=4", - "description": "Neuroimaging analysis and visualization suite", - "topics": [ - "freesurfer", - "neuroimaging", - "mri", - "lcn" - ] + "uid": "github/hydroframe/subsettools", + "url": "https://github.com/hydroframe/subsettools", + "rel": "/software/repository/github/hydroframe/subsettools", + "avatar": "https://avatars.githubusercontent.com/u/48289869?v=4", + "description": "Subsetting tools and utilities for ParFlow hydrological modeling", + "topics": [] }, { - "uid": "github/ImperialCollegeLondon/pytest_template_application", - "url": "https://github.com/ImperialCollegeLondon/pytest_template_application", - "rel": "/software/repository/github/ImperialCollegeLondon/pytest_template_application", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Python application template with automated QA and Docker image publishing", + "uid": "github/SpaceML/GalaxyGAN", + "url": "https://github.com/SpaceML/GalaxyGAN", + "rel": "/software/repository/github/SpaceML/GalaxyGAN", + "avatar": "https://avatars.githubusercontent.com/u/25198533?v=4", + "description": null, "topics": [] }, { - "uid": "github/ImperialCollegeLondon/champ", - "url": "https://github.com/ImperialCollegeLondon/champ", - "rel": "/software/repository/github/ImperialCollegeLondon/champ", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": null, + "uid": "github/timothydmorton/vespa", + "url": "https://github.com/timothydmorton/VESPA", + "rel": "/software/repository/github/timothydmorton/vespa", + "avatar": "https://avatars.githubusercontent.com/u/1895387?v=4", + "description": "Validation of Exoplanet Signals using a Probabilistic Algorithm--- calculating false positive probabilities for transit signals", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/sap-voicebox", - "url": "https://github.com/ImperialCollegeLondon/sap-voicebox", - "rel": "/software/repository/github/ImperialCollegeLondon/sap-voicebox", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Speech Processing Toolbox for MATLAB", + "uid": "github/timothydmorton/isochrones", + "url": "https://github.com/timothydmorton/isochrones", + "rel": "/software/repository/github/timothydmorton/isochrones", + "avatar": "https://avatars.githubusercontent.com/u/1895387?v=4", + "description": "Pythonic stellar model grid access; easy MCMC fitting of stellar properties", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/hcga", - "url": "https://github.com/barahona-research-group/hcga", - "rel": "/software/repository/github/ImperialCollegeLondon/hcga", - "avatar": "https://avatars.githubusercontent.com/u/51328597?v=4", - "description": "Highly Comparative Graph Analysis - Code for network phenotyping ", - "topics": [ - "networks", - "feature-extraction", - "classification-algorithm", - "graph-features", - "interpretable-features", - "graph-analysis-toolbox", - "graph-embedding" - ] + "uid": "github/hippke/pandora", + "url": "https://github.com/hippke/Pandora", + "rel": "/software/repository/github/hippke/pandora", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "A fast transit-fitting algorithm to search for transits of exomoons", + "topics": [] }, { - "uid": "github/ImperialCollegeLondon/SWMManywhere", - "url": "https://github.com/ImperialCollegeLondon/SWMManywhere", - "rel": "/software/repository/github/ImperialCollegeLondon/SWMManywhere", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "SWMManywhere is used to derive and simulate a sewer network anywhere in the world", + "uid": "github/hippke/wotan", + "url": "https://github.com/hippke/wotan", + "rel": "/software/repository/github/hippke/wotan", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "Automagically remove trends from time-series data", "topics": [ - "hacktoberfest", - "hydrology-stormwater-analysis", - "python", - "stormwater", - "swmm", - "swmm5", - "hydraulic-modelling", - "swmmanywhere" + "light", + "curve", + "transit", + "outlier", + "detrend", + "exoplanets", + "robust-estimators", + "exoplanet" ] }, { - "uid": "github/ImperialCollegeLondon/ICLOCS", - "url": "https://github.com/ImperialCollegeLondon/ICLOCS", - "rel": "/software/repository/github/ImperialCollegeLondon/ICLOCS", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Imperial College London Optimal Control Software (ICLOCS)", + "uid": "github/hippke/PyOSE", + "url": "https://github.com/hippke/PyOSE", + "rel": "/software/repository/github/hippke/PyOSE", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "Stacked exomoons with the Orbital Sampling Effect", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/UVLM", - "url": "https://github.com/ImperialCollegeLondon/UVLM", - "rel": "/software/repository/github/ImperialCollegeLondon/UVLM", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Unsteady Vortex Lattice Method for Aeroelasticity in C++", + "uid": "github/hippke/communication", + "url": "https://github.com/hippke/communication", + "rel": "/software/repository/github/hippke/communication", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "Interstellar communication", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/safedata", - "url": "https://github.com/ImperialCollegeLondon/safedata", - "rel": "/software/repository/github/ImperialCollegeLondon/safedata", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "An R package for discovering and using data from the SAFE Project", + "uid": "github/hippke/pulses", + "url": "https://github.com/hippke/pulses", + "rel": "/software/repository/github/hippke/pulses", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "Periodic Spectral Modulations Arise from Non-random Spacing of Spectral Absorption Lines", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/rcs_cluster_scripts", - "url": "https://github.com/ImperialCollegeLondon/rcs_cluster_scripts", - "rel": "/software/repository/github/ImperialCollegeLondon/rcs_cluster_scripts", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "A collection of handy scripts for use with the Imperial College Research Computing Service cluster", - "topics": [] + "uid": "github/hippke/tls", + "url": "https://github.com/hippke/tls", + "rel": "/software/repository/github/hippke/tls", + "avatar": "https://avatars.githubusercontent.com/u/11958117?v=4", + "description": "Transit Least Squares: An optimized transit-fitting algorithm to search for periodic transits of small planets", + "topics": [ + "planet", + "exoplanet", + "transit", + "least", + "squares", + "algorithm", + "tls", + "periodic", + "python", + "exoplanets" + ] }, { - "uid": "github/ImperialCollegeLondon/fractalgenetics", - "url": "https://github.com/ImperialCollegeLondon/fractalgenetics", - "rel": "/software/repository/github/ImperialCollegeLondon/fractalgenetics", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Analysis of the genomic architecture and functional role of myocardial trabeculae", + "uid": "github/deaglanbartlett/symbolic_pofk", + "url": "https://github.com/DeaglanBartlett/symbolic_pofk", + "rel": "/software/repository/github/deaglanbartlett/symbolic_pofk", + "avatar": "https://avatars.githubusercontent.com/u/47668431?v=4", + "description": "Precise symbolic emulators of the linear and nonlinear matter power spectrum", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/research-software-directory-data", - "url": "https://github.com/ImperialCollegeLondon/research-software-directory", - "rel": "/software/repository/github/ImperialCollegeLondon/research-software-directory-data", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Imperial College Research Software Directory", - "topics": [] + "uid": "github/flatironinstitute/nifty-ls", + "url": "https://github.com/flatironinstitute/nifty-ls", + "rel": "/software/repository/github/flatironinstitute/nifty-ls", + "avatar": "https://avatars.githubusercontent.com/u/32853892?v=4", + "description": "A fast Lomb-Scargle periodogram. It's nifty, and uses a NUFFT!", + "topics": [ + "lomb-scargle-periodogram", + "spectral-analysis", + "time-series" + ] }, { - "uid": "github/ImperialCollegeLondon/R2T2", - "url": "https://github.com/ImperialCollegeLondon/R2T2", - "rel": "/software/repository/github/ImperialCollegeLondon/R2T2", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Research References Tracking Tool", - "topics": [] + "uid": "github/FabianPlum/OmniTrax", + "url": "https://github.com/FabianPlum/OmniTrax", + "rel": "/software/repository/github/FabianPlum/OmniTrax", + "avatar": "https://avatars.githubusercontent.com/u/26245490?v=4", + "description": "Deep learning-driven multi animal tracking and pose estimation add-on for Blender", + "topics": [ + "blender", + "deeplabcut", + "deeplearning", + "object-detection", + "tracking", + "yolo" + ] }, { - "uid": "github/ImperialCollegeLondon/covid19model", - "url": "https://github.com/ImperialCollegeLondon/covid19model", - "rel": "/software/repository/github/ImperialCollegeLondon/covid19model", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Code for modelling estimated deaths and cases for COVID19. ", + "uid": "github/bioinfodlsu/PHIStruct", + "url": "https://github.com/bioinfodlsu/PHIStruct", + "rel": "/software/repository/github/bioinfodlsu/PHIStruct", + "avatar": "https://avatars.githubusercontent.com/u/121936683?v=4", + "description": "Published in Bioinformatics. Phage-host interaction prediction tool that incorporates protein structure information in representing receptor-binding proteins (RBPs). It improves performance especially for phages with RBPs that have low sequence similarity to those of known phages", "topics": [ - "covid-19", - "bayesian-statistics", - "renewal-process", - "branching-process", - "intervention-study", - "probabilistic-models", - "statistical-models", - "statistical-inference", - "statistical-computing" + "bioinformatics", + "deep-learning", + "genomics", + "machine-learning", + "phage-host-prediction", + "protein", + "protein-embedding", + "protein-language-model", + "protein-structure", + "proteomics", + "representation-learning", + "transfer-learning", + "transformer", + "alphafold", + "alphafold2" ] }, { - "uid": "github/ImperialCollegeLondon/sharpy", - "url": "https://github.com/ImperialCollegeLondon/sharpy", - "rel": "/software/repository/github/ImperialCollegeLondon/sharpy", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Simulation of High Aspect Ratio aeroplanes and wind turbines in Python: a nonlinear aeroelastic code", + "uid": "github/bioinfodlsu/phage-host-prediction", + "url": "https://github.com/bioinfodlsu/phage-host-prediction", + "rel": "/software/repository/github/bioinfodlsu/phage-host-prediction", + "avatar": "https://avatars.githubusercontent.com/u/121936683?v=4", + "description": "Published in PLOS ONE. Phage-host interaction prediction tool that uses protein language models to represent the receptor-binding proteins of phages. It presents improvements over using handcrafted sequence properties and eliminates the need to manually extract and select features from phage sequences", "topics": [ - "aeroelasticity", - "simulation", - "aeronautics", - "structures", - "structural-dynamics", - "wind-turbines" + "bioinformatics", + "genomics", + "phage-host-prediction", + "protein", + "protein-embedding", + "protein-language-model", + "proteomics", + "representation-learning", + "transfer-learning", + "transformer", + "machine-learning" ] }, { - "uid": "github/ImperialCollegeLondon/magda_tools", - "url": "https://github.com/ImperialCollegeLondon/magda_tools", - "rel": "/software/repository/github/ImperialCollegeLondon/magda_tools", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "A collection of tools for working with MAGDA data files", + "uid": "github/MathynVanD/GraFIT", + "url": "https://github.com/MathynVanD/GraFIT", + "rel": "/software/repository/github/MathynVanD/GraFIT", + "avatar": "https://avatars.githubusercontent.com/u/79399617?v=4", + "description": "Toolbox for Frequency Response Function Identification in Gravitational Wave detectors", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/epidemia", - "url": "https://github.com/ImperialCollegeLondon/epidemia", - "rel": "/software/repository/github/ImperialCollegeLondon/epidemia", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "epidemia package", + "uid": "github/pyranges/pyrle", + "url": "https://github.com/pyranges/pyrle", + "rel": "/software/repository/github/pyranges/pyrle", + "avatar": "https://avatars.githubusercontent.com/u/49520481?v=4", + "description": "Numerical Run Length Encoding and Arithmetic in Cython", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/rcs-pacemakers", - "url": "https://github.com/ImperialCollegeLondon/rcs-pacemakers", - "rel": "/software/repository/github/ImperialCollegeLondon/rcs-pacemakers", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Example of GPU-accelerated machine learning on the RCS compute cluster using Jupyter and conda", + "uid": "github/PavlidisLab/Gemma", + "url": "https://github.com/PavlidisLab/Gemma", + "rel": "/software/repository/github/PavlidisLab/Gemma", + "avatar": "https://avatars.githubusercontent.com/u/25695421?v=4", + "description": "Genomics data re-analysis", "topics": [ - "jupyter", - "pytorch", - "computer-vision", - "machine-learning", - "python" + "bioinformatics", + "genomics" ] }, { - "uid": "github/ImperialCollegeLondon/django-drf-filepond", - "url": "https://github.com/ImperialCollegeLondon/django-drf-filepond", - "rel": "/software/repository/github/ImperialCollegeLondon/django-drf-filepond", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "A Django app providing a server implemention for the Filepond file upload library", + "uid": "github/AWehrhahn/SME", + "url": "https://github.com/AWehrhahn/SME", + "rel": "/software/repository/github/AWehrhahn/SME", + "avatar": "https://avatars.githubusercontent.com/u/31626864?v=4", + "description": "Spectroscopy Made Easy", "topics": [ - "file-upload", - "filepond", - "django-application" + "astronomy", + "spectroscopy", + "modelling" ] }, { - "uid": "github/ImperialCollegeLondon/WInc3D", - "url": "https://github.com/ImperialCollegeLondon/WInc3D", - "rel": "/software/repository/github/ImperialCollegeLondon/WInc3D", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Wind Farm Simulator", + "uid": "github/LCOGT/banzai", + "url": "https://github.com/LCOGT/banzai", + "rel": "/software/repository/github/LCOGT/banzai", + "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", + "description": "Beautiful Algorithms to Normalize Zillions of Astronomical Images", + "topics": [ + "backend" + ] + }, + { + "uid": "github/LCOGT/banzai-nres", + "url": "https://github.com/LCOGT/banzai-nres", + "rel": "/software/repository/github/LCOGT/banzai-nres", + "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", + "description": "BANZAI Data Reduction Pipeline for NRES", + "topics": [ + "backend" + ] + }, + { + "uid": "github/LCOGT/neoexchange", + "url": "https://github.com/LCOGT/neoexchange", + "rel": "/software/repository/github/LCOGT/neoexchange", + "avatar": "https://avatars.githubusercontent.com/u/3358238?v=4", + "description": "NEO observing portal", + "topics": [ + "backend", + "end-user", + "astronomy", + "asteroids" + ] + }, + { + "uid": "github/fredstro/hilbertmodgroup", + "url": "https://github.com/fredstro/hilbertmodgroup", + "rel": "/software/repository/github/fredstro/hilbertmodgroup", + "avatar": "https://avatars.githubusercontent.com/u/1598083?v=4", + "description": "Implementation of Hilbert modular groups using SageMath", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/adam", - "url": "https://github.com/ImperialCollegeLondon/adam", - "rel": "/software/repository/github/ImperialCollegeLondon/adam", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": null, + "uid": "github/arabic-digital-humanities/adhtools", + "url": "https://github.com/arabic-digital-humanities/adhtools", + "rel": "/software/repository/github/arabic-digital-humanities/adhtools", + "avatar": "https://avatars3.githubusercontent.com/u/35798486?v=4", + "description": "Scripts for manipulating Arabic texts", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/EpiCollectplus", - "url": "https://github.com/ImperialCollegeLondon/EpiCollectplus", - "rel": "/software/repository/github/ImperialCollegeLondon/EpiCollectplus", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "The next generation of EpiCollect, multiple forms, more fields and more control. We recommend using Apache 2.2 or later, PHP 5.3 or later and MySQL 5.5 or later.", + "uid": "github/mms-fcul/PypKa", + "url": "https://github.com/mms-fcul/PypKa", + "rel": "/software/repository/github/mms-fcul/PypKa", + "avatar": "https://avatars.githubusercontent.com/u/40458511?v=4", + "description": "A python module for flexible Poisson-Boltzmann based pKa calculations with proton tautomerism", "topics": [] }, { - "uid": "github/ImperialCollegeLondon/PyProBE", - "url": "https://github.com/ImperialCollegeLondon/PyProBE", - "rel": "/software/repository/github/ImperialCollegeLondon/PyProBE", - "avatar": "https://avatars.githubusercontent.com/u/1220306?v=4", - "description": "Python Processing for Battery Experiments", + "uid": "github/max-little/GRAPL", + "url": "https://github.com/max-little/GRAPL", + "rel": "/software/repository/github/max-little/GRAPL", + "avatar": "https://avatars.githubusercontent.com/u/102555976?v=4", + "description": "GRAPL: A computational library for nonparametric structural causal modelling, analysis and inference", "topics": [] }, { - "uid": "github/agnetelundgaard/BALDR", - "url": "https://github.com/agnetelundgaard/BALDR", - "rel": "/software/repository/github/agnetelundgaard/BALDR", - "avatar": "https://avatars.githubusercontent.com/u/42959833?v=4", - "description": null, + "uid": "github/konradhoeffner/hdt", + "url": "https://github.com/KonradHoeffner/hdt", + "rel": "/software/repository/github/konradhoeffner/hdt", + "avatar": "https://avatars.githubusercontent.com/u/839577?v=4", + "description": "Library for the Header Dictionary Triples (HDT) compression file format for RDF data.", "topics": [] }, { - "uid": "github/barbagroup/geoclaw-landspill", - "url": "https://github.com/barbagroup/geoclaw-landspill", - "rel": "/software/repository/github/barbagroup/geoclaw-landspill", - "avatar": "https://avatars.githubusercontent.com/u/6503785?v=4", - "description": "An oil land-spill and overland flow simulator for pipeline rupture events", + "uid": "github/xCDAT/xcdat", + "url": "https://github.com/xCDAT/xcdat", + "rel": "/software/repository/github/xCDAT/xcdat", + "avatar": "https://avatars.githubusercontent.com/u/87787695?v=4", + "description": "An extension of xarray for climate data analysis on structured grids.", "topics": [ - "geoclaw", - "overland-flow", - "pipeline", - "shallow-water-equations", - "pipeline-ruptures", - "land-spill" + "climate-data-analysis", + "xarray", + "climate-science", + "python", + "climate-data", + "cdat", + "xcdat", + "climate-research", + "climate-analysis", + "climate-sciences", + "cf-conventions", + "cmip", + "cmip6", + "e3sm", + "pcmdi" ] }, { - "uid": "github/parallelwindfarms/byteparsing", - "url": "https://github.com/parallelwindfarms/byteparsing", - "rel": "/software/repository/github/parallelwindfarms/byteparsing", - "avatar": "https://avatars.githubusercontent.com/u/45036415?v=4", - "description": "Parser for mixed binary/ASCII data in Python", + "uid": "github/mianbreton/pysco", + "url": "https://github.com/mianbreton/pysco", + "rel": "/software/repository/github/mianbreton/pysco", + "avatar": "https://avatars.githubusercontent.com/u/72379931?v=4", + "description": "Cosmological N-body code with modified gravity theories", "topics": [] }, { - "uid": "github/dvallesp/vortex-p", - "url": "https://github.com/dvallesp/vortex-p", - "rel": "/software/repository/github/dvallesp/vortex-p", - "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", - "description": "Implements a Helmholtz-Hodge decomposition and a Reynolds decomposition for the velocity field of general particle-based simulation outputs", + "uid": "github/hotokezaka/HeatingRate", + "url": "https://github.com/hotokezaka/HeatingRate", + "rel": "/software/repository/github/hotokezaka/HeatingRate", + "avatar": "https://avatars.githubusercontent.com/u/38815342?v=4", + "description": null, "topics": [] }, { - "uid": "github/dvallesp/asohf", - "url": "https://github.com/dvallesp/ASOHF", - "rel": "/software/repository/github/dvallesp/asohf", - "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", - "description": "Adaptive Spherical Overdensity Halo Finder (Planelles & Quilis, 2010. A&A, 519:A94; Vall\u00e9s-P\u00e9rez, Planelles & Quilis, 2022. A&A in press)", + "uid": "github/julblarod/SOPHISM", + "url": "https://github.com/julblarod/SOPHISM", + "rel": "/software/repository/github/julblarod/SOPHISM", + "avatar": "https://avatars.githubusercontent.com/u/37220095?v=4", + "description": "Repository for software instrument simulator SOPHISM", "topics": [] }, { - "uid": "github/dvallesp/vortex", - "url": "https://github.com/dvallesp/vortex", - "rel": "/software/repository/github/dvallesp/vortex", - "avatar": "https://avatars.githubusercontent.com/u/6805116?v=4", - "description": "Implements Helmholtz-Hodge decomposition for an AMR velocity field", + "uid": "github/ParkvilleData/MetaGenePipe", + "url": "https://github.com/ParkvilleData/MetaGenePipe", + "rel": "/software/repository/github/ParkvilleData/MetaGenePipe", + "avatar": "https://avatars.githubusercontent.com/u/44953352?v=4", + "description": "MGP", "topics": [] }, { - "uid": "github/mourisl/Lighter", - "url": "https://github.com/mourisl/Lighter", - "rel": "/software/repository/github/mourisl/Lighter", - "avatar": "https://avatars.githubusercontent.com/u/1904147?v=4", - "description": "Fast and memory-efficient sequencing error corrector", + "uid": "github/Adamtaranto/mimeo", + "url": "https://github.com/Adamtaranto/mimeo", + "rel": "/software/repository/github/Adamtaranto/mimeo", + "avatar": "https://avatars.githubusercontent.com/u/2160099?v=4", + "description": "Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.", "topics": [] }, { - "uid": "github/pmlmodelling/nctoolkit", - "url": "https://github.com/pmlmodelling/nctoolkit", - "rel": "/software/repository/github/pmlmodelling/nctoolkit", - "avatar": "https://avatars.githubusercontent.com/u/72567641?v=4", - "description": "A Python package for netCDF analysis and post-processing", - "topics": [ - "cdo", - "python", - "netcdf" - ] + "uid": "github/Adamtaranto/Yanagiba", + "url": "https://github.com/Adamtaranto/Yanagiba", + "rel": "/software/repository/github/Adamtaranto/Yanagiba", + "avatar": "https://avatars.githubusercontent.com/u/2160099?v=4", + "description": "Filter and slice Nanopore reads which have been basecalled with Albacore.", + "topics": [] }, { - "uid": "github/aprsa/dips", - "url": "https://github.com/aprsa/dips", - "rel": "/software/repository/github/aprsa/dips", - "avatar": "https://avatars.githubusercontent.com/u/2669162?v=4", - "description": "dips: detrending periodic signals in timeseries.", + "uid": "github/mofanv/darknetz", + "url": "https://github.com/mofanv/darknetz", + "rel": "/software/repository/github/mofanv/darknetz", + "avatar": "https://avatars.githubusercontent.com/u/23327428?v=4", + "description": "runs several layers of a deep learning model in TrustZone", "topics": [] }, { - "uid": "github/aprsa/ebai", - "url": "https://github.com/aprsa/ebai", - "rel": "/software/repository/github/aprsa/ebai", - "avatar": "https://avatars.githubusercontent.com/u/2669162?v=4", - "description": "Eclipsing Binaries with Artificial Intelligence", - "topics": [] + "uid": "github/rajeshmondal18/FoF-Halo-finder", + "url": "https://github.com/rajeshmondal18/FoF-Halo-finder", + "rel": "/software/repository/github/rajeshmondal18/FoF-Halo-finder", + "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", + "description": "A code to identify the location and size of the gravitationally collapsed dark matter halos.", + "topics": [ + "cosmology", + "halo-finding", + "halos", + "reionization", + "n-body", + "fof-halo-finder", + "collapsed-objects", + "algorithm" + ] }, { - "uid": "github/archaeo-pteryx/PowerSpecCovFFT", - "url": "https://github.com/archaeo-pteryx/PowerSpecCovFFT", - "rel": "/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", - "avatar": "https://avatars.githubusercontent.com/u/16079514?v=4", - "description": "FFTLog-based computation of non-Gaussian analytic covariance of galaxy power spectrum multipoles ", + "uid": "github/rajeshmondal18/MAPS", + "url": "https://github.com/rajeshmondal18/MAPS", + "rel": "/software/repository/github/rajeshmondal18/MAPS", + "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", + "description": "The Multi-frequency Angular Power Spectrum (MAPS) estimator", "topics": [] }, { - "uid": "github/vcflib/bio-vcf", - "url": "https://github.com/vcflib/bio-vcf", - "rel": "/software/repository/github/vcflib/bio-vcf", - "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", - "description": "Smart VCF parser DSL", - "topics": [] + "uid": "github/rajeshmondal18/N-body", + "url": "https://github.com/rajeshmondal18/N-body", + "rel": "/software/repository/github/rajeshmondal18/N-body", + "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", + "description": "A code to compute the non-linear evolution of the cosmological matter density contrast.", + "topics": [ + "cosmology", + "simulation", + "n-body", + "particle-mesh", + "reionization", + "nbody", + "parallel" + ] }, { - "uid": "github/vcflib/vcflib", - "url": "https://github.com/vcflib/vcflib", - "rel": "/software/repository/github/vcflib/vcflib", - "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", - "description": " C++ library and cmdline tools for parsing and manipulating VCF files", + "uid": "github/rajeshmondal18/ReionYuga", + "url": "https://github.com/rajeshmondal18/ReionYuga", + "rel": "/software/repository/github/rajeshmondal18/ReionYuga", + "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", + "description": "A semi-numerical code to generate the Epoch of Reionization (EoR) neutral Hydrogen (HI) field.", "topics": [ - "variant-calling", - "genomics", - "vcf-manipulation", - "genotyping", - "haplotypecaller" + "cosmology", + "reionization", + "large-scale-structure", + "semi-numerical", + "21cm-signal", + "eor" ] }, { - "uid": "github/domeckert/pyproffit", - "url": "https://github.com/domeckert/pyproffit", - "rel": "/software/repository/github/domeckert/pyproffit", - "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", - "description": "Pyproffit is a Python code for the analysis of X-ray brightness profiles from clusters of galaxies", + "uid": "github/rajeshmondal18/DviSukta", + "url": "https://github.com/rajeshmondal18/DviSukta", + "rel": "/software/repository/github/rajeshmondal18/DviSukta", + "avatar": "https://avatars.githubusercontent.com/u/7043104?v=4", + "description": "A direct estimator of the bispectrum", "topics": [] }, { - "uid": "github/domeckert/hydromass", - "url": "https://github.com/domeckert/hydromass", - "rel": "/software/repository/github/domeckert/hydromass", - "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", - "description": "Hydrostatic mass profile reconstruction using X-ray and/or Sunyaev-Zeldovich data", + "uid": "github/DariaGangardt/pAGN", + "url": "https://github.com/DariaGangardt/pAGN", + "rel": "/software/repository/github/DariaGangardt/pAGN", + "avatar": "https://avatars.githubusercontent.com/u/74964676?v=4", + "description": "Python package to solve AGN disk model equations.", "topics": [] }, { - "uid": "github/domeckert/xmm_simulator", - "url": "https://github.com/domeckert/xmm_simulator", - "rel": "/software/repository/github/domeckert/xmm_simulator", - "avatar": "https://avatars.githubusercontent.com/u/47885645?v=4", - "description": "Python class to generate mock XMM-Newton spectra and images from 3D cubes extracted from hydro simulations", + "uid": "github/SharmaLlama/ticktack", + "url": "https://github.com/SharmaLlama/ticktack", + "rel": "/software/repository/github/SharmaLlama/ticktack", + "avatar": "https://avatars.githubusercontent.com/u/72532670?v=4", + "description": "An open-source carbon box model implementation built on JAX.", "topics": [] }, { - "uid": "github/nvalimak/fsm-lite", - "url": "https://github.com/nvalimak/fsm-lite", - "rel": "/software/repository/github/nvalimak/fsm-lite", - "avatar": "https://avatars.githubusercontent.com/u/5276023?v=4", - "description": "frequency-based string mining (lite)", + "uid": "github/assumpcaothiago/NRPyElliptic", + "url": "https://github.com/assumpcaothiago/NRPyElliptic", + "rel": "/software/repository/github/assumpcaothiago/NRPyElliptic", + "avatar": "https://avatars.githubusercontent.com/u/66119258?v=4", + "description": "NRPyElliptic: fast hyperbolic relaxation solver for elliptic equations", "topics": [] }, { - "uid": "github/connectomicslab/connectomemapper3", - "url": "https://github.com/connectomicslab/connectomemapper3", - "rel": "/software/repository/github/connectomicslab/connectomemapper3", - "avatar": "https://avatars.githubusercontent.com/u/49934994?v=4", - "description": "Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD data, and preprocessed EEG to multi-resolution brain parcellation with corresponding connection matrices.", + "uid": "github/RobertHTyler/TROPF", + "url": "https://github.com/RobertHTyler/TROPF", + "rel": "/software/repository/github/RobertHTyler/TROPF", + "avatar": "https://avatars.githubusercontent.com/u/55106747?v=4", + "description": "Tidal Response Of Planetary Fluids (TROPF): a Matlab/Octave software package for calculating the tidal response of planetary fluids", + "topics": [] + }, + { + "uid": "github/BIMSBbioinfo/pigx_scrnaseq", + "url": "https://github.com/BIMSBbioinfo/pigx_scrnaseq", + "rel": "/software/repository/github/BIMSBbioinfo/pigx_scrnaseq", + "avatar": "https://avatars.githubusercontent.com/u/6482905?v=4", + "description": "Pipeline for analysis of Dropseq single cell data", "topics": [ - "bids", - "bidsapp", - "dmri", - "fmri", - "connectome", - "bids-apps", - "pipelines", - "chuv", - "brain", - "parcellation", - "python", - "eeg" + "dropseq", + "single-cell-rna-seq", + "snakemake-workflows", + "guix" ] }, { - "uid": "github/radicamc/exoTEDRF", - "url": "https://github.com/radicamc/exoTEDRF", - "rel": "/software/repository/github/radicamc/exoTEDRF", - "avatar": "https://avatars.githubusercontent.com/u/44100686?v=4", - "description": "Tools for end-to-end reduction of JWST exoplanet observations", + "uid": "github/BIMSBbioinfo/pigx_rnaseq", + "url": "https://github.com/BIMSBbioinfo/pigx_rnaseq", + "rel": "/software/repository/github/BIMSBbioinfo/pigx_rnaseq", + "avatar": "https://avatars.githubusercontent.com/u/6482905?v=4", + "description": "Pipeline for RNAseq", "topics": [ - "atmosphere", - "exoplanet", - "jwst", - "miri", - "niriss", - "nirspec", - "soss", - "spectroscopy", - "tedorf" + "rnaseq", + "pipeline", + "snakemake", + "guix", + "reproducibility" ] }, { - "uid": "github/radicamc/applesoss", - "url": "https://github.com/radicamc/applesoss", - "rel": "/software/repository/github/radicamc/applesoss", - "avatar": "https://avatars.githubusercontent.com/u/44100686?v=4", - "description": "A Producer of ProfiLEs for SOSS", + "uid": "github/dieghernan/tidyterra", + "url": "https://github.com/dieghernan/tidyterra", + "rel": "/software/repository/github/dieghernan/tidyterra", + "avatar": "https://avatars.githubusercontent.com/u/25656809?v=4", + "description": "tidyverse and ggplot2 methods for terra spatial objects", "topics": [ - "astronomy", - "exoplanet-atmospheres", - "exoplanets", - "jwst", - "niriss", - "python", - "soss", - "spectroscopy" + "ggplot-extension", + "r-package", + "r-spatial", + "rspatial", + "rstats", + "rstats-package", + "terra", + "cran", + "cran-r", + "r" ] }, { - "uid": "github/FabrizioMusacchio/MotilA", - "url": "https://github.com/FabrizioMusacchio/MotilA", - "rel": "/software/repository/github/FabrizioMusacchio/MotilA", - "avatar": "https://avatars.githubusercontent.com/u/81537532?v=4", - "description": "Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data", + "uid": "github/acerbilab/pybads", + "url": "https://github.com/acerbilab/pybads", + "rel": "/software/repository/github/acerbilab/pybads", + "avatar": "https://avatars.githubusercontent.com/u/99487879?v=4", + "description": "PyBADS: Bayesian Adaptive Direct Search optimization algorithm for model fitting in Python", "topics": [ - "image-processing", - "image-segmentation", - "microglia", - "microglial-motility", - "motility", - "motility-analysis", - "neuroscience", + "bayesian-optimization", + "log-likelihood", + "noiseless-functions", + "noisy-functions", + "optimization-algorithms", "python" ] }, { - "uid": "github/BogdanCiambur/PROFILER", - "url": "https://github.com/BogdanCiambur/PROFILER", - "rel": "/software/repository/github/BogdanCiambur/PROFILER", - "avatar": "https://avatars.githubusercontent.com/u/19526241?v=4", - "description": "This repository contains the code Profiler, a Python program for decomposing galaxy light profiles in 1D", + "uid": "github/Autostronomy/AstroPhot", + "url": "https://github.com/Autostronomy/AstroPhot", + "rel": "/software/repository/github/Autostronomy/AstroPhot", + "avatar": "https://avatars.githubusercontent.com/u/136352278?v=4", + "description": "A fast, flexible, automated, and differentiable astronomical image modelling tool for precise parallel multi-wavelength photometry", "topics": [ - "galaxy-morphology", - "galaxy", - "decompose-galaxy-profiles", - "astronomical-algorithms", + "astronomy", "python", - "profile", - "lmfit" + "pytorch", + "scientific-computing", + "science-research" ] }, { - "uid": "github/pengweixing/FACT", - "url": "https://github.com/pengweixing/FACT", - "rel": "/software/repository/github/pengweixing/FACT", - "avatar": "https://avatars.githubusercontent.com/u/33319823?v=4", - "description": null, + "uid": "github/luxsrc/gray", + "url": "https://github.com/luxsrc/gray", + "rel": "/software/repository/github/luxsrc/gray", + "avatar": "https://avatars.githubusercontent.com/u/33961050?v=4", + "description": "A general relativistic ray tracing code based on lux", "topics": [] }, { - "uid": "github/MSABuschmann/sledgehamr", - "url": "https://github.com/MSABuschmann/sledgehamr", - "rel": "/software/repository/github/MSABuschmann/sledgehamr", - "avatar": "https://avatars.githubusercontent.com/u/22368016?v=4", - "description": "Sledgehamr is an AMReX-based code package to simulate the dynamics of coupled scalar fields on a 3-dimensional adaptive mesh.", - "topics": [] + "uid": "github/delve-team/delve", + "url": "https://github.com/delve-team/delve", + "rel": "/software/repository/github/delve-team/delve", + "avatar": "https://avatars.githubusercontent.com/u/48019028?v=4", + "description": "PyTorch model training and layer saturation monitor", + "topics": [ + "pytorch", + "model-training", + "training-monitor", + "layer-saturation", + "pruning", + "visualization", + "neural-dynamics", + "deep-learning", + "convolutional-neural-networks" + ] }, { - "uid": "github/BioMeCIS-Lab/OpenOmics", - "url": "https://github.com/BioMeCIS-Lab/OpenOmics", - "rel": "/software/repository/github/BioMeCIS-Lab/OpenOmics", - "avatar": "https://avatars.githubusercontent.com/u/55261376?v=4", - "description": "A bioinformatics API and web-app to integrate multi-omics datasets & interface with public databases.", + "uid": "github/labsyspharm/minerva-story", + "url": "https://github.com/labsyspharm/minerva-story", + "rel": "/software/repository/github/labsyspharm/minerva-story", + "avatar": "https://avatars2.githubusercontent.com/u/47149595?v=4", + "description": "Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.", "topics": [ - "genomics", - "multi-omics", - "data-integration", - "python", - "data-manipulation" + "minerva", + "microscopy", + "ome", + "immunofluorescence" ] }, { - "uid": "github/free1234hm/CLAM", - "url": "https://github.com/free1234hm/CLAM", - "rel": "/software/repository/github/free1234hm/CLAM", - "avatar": "https://avatars.githubusercontent.com/u/20533099?v=4", - "description": null, - "topics": [] + "uid": "github/tqsd/photon_weave", + "url": "https://github.com/tqsd/photon_weave", + "rel": "/software/repository/github/tqsd/photon_weave", + "avatar": "https://avatars.githubusercontent.com/u/56349211?v=4", + "description": "Photon Weave", + "topics": [ + "optics", + "quantum-optics", + "quantum-simulator", + "jax", + "quantum", + "quantum-computing", + "quantum-physics", + "quantum-optics-simulation" + ] }, { - "uid": "github/elixir-europe/rdmkit", - "url": "https://github.com/elixir-europe/rdmkit", - "rel": "/software/repository/github/elixir-europe/rdmkit", - "avatar": "https://avatars.githubusercontent.com/u/18418326?v=4", - "description": "ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.", + "uid": "github/opnavlab/sonic", + "url": "https://github.com/opnavlab/sonic", + "rel": "/software/repository/github/opnavlab/sonic", + "avatar": "https://avatars.githubusercontent.com/u/166256530?v=4", + "description": "SONIC is an object-oriented optical navigation (OPNAV) toolkit written in MATLAB.", "topics": [ - "research", - "data-management", - "rdm", - "toolkit" + "camera-calibration", + "opnav", + "projective-geometry", + "triangulation", + "astrometry" ] }, { - "uid": "github/dingyaozhang/Evitar", - "url": "https://github.com/dingyaozhang/Evitar", - "rel": "/software/repository/github/dingyaozhang/Evitar", - "avatar": "https://avatars.githubusercontent.com/u/59897897?v=4", - "description": null, + "uid": "github/darthoctopus/reggae", + "url": "https://github.com/darthoctopus/reggae", + "rel": "/software/repository/github/darthoctopus/reggae", + "avatar": "https://avatars.githubusercontent.com/u/5761408?v=4", + "description": "pbjam for dipole modes", "topics": [] }, { - "uid": "github/kidusasfaw/spatPomp", - "url": "https://github.com/kidusasfaw/spatPomp", - "rel": "/software/repository/github/kidusasfaw/spatPomp", - "avatar": "https://avatars.githubusercontent.com/u/875338?v=4", - "description": "R package for statistical inference of spatiotemporal partially observed Markov processes", + "uid": "github/astroML/gatspy", + "url": "https://github.com/astroML/gatspy", + "rel": "/software/repository/github/astroML/gatspy", + "avatar": "https://avatars.githubusercontent.com/u/1971246?v=4", + "description": "General tools for Astronomical Time Series in Python", "topics": [] }, { - "uid": "github/cbrueffer/tophat-recondition", - "url": "https://github.com/cbrueffer/tophat-recondition", - "rel": "/software/repository/github/cbrueffer/tophat-recondition", - "avatar": "https://avatars3.githubusercontent.com/u/2705287?v=4", - "description": "Post-processor for TopHat unmapped.bam files making them useable by downstream software.", + "uid": "github/mtholder/ncl", + "url": "https://github.com/mtholder/ncl", + "rel": "/software/repository/github/mtholder/ncl", + "avatar": "https://avatars.githubusercontent.com/u/136067?v=4", + "description": "Nexus Class Library ", + "topics": [] + }, + { + "uid": "github/joshspeagle/dynesty", + "url": "https://github.com/joshspeagle/dynesty", + "rel": "/software/repository/github/joshspeagle/dynesty", + "avatar": "https://avatars.githubusercontent.com/u/13280133?v=4", + "description": "Dynamic Nested Sampling package for computing Bayesian posteriors and evidences", "topics": [ - "tophat", - "python", - "bioinformatics", - "sam", - "tophat-recondition", - "ngs" + "nested-sampling", + "pure-python", + "mit-license", + "bayesian-inference", + "monte-carlo", + "model-selection" ] }, { - "uid": "github/pezmaster31/bamtools", - "url": "https://github.com/pezmaster31/bamtools", - "rel": "/software/repository/github/pezmaster31/bamtools", - "avatar": "https://avatars.githubusercontent.com/u/282978?v=4", - "description": "C++ API & command-line toolkit for working with BAM data", - "topics": [] + "uid": "github/Schuch666/eva3dm", + "url": "https://github.com/Schuch666/eva3dm", + "rel": "/software/repository/github/Schuch666/eva3dm", + "avatar": "https://avatars.githubusercontent.com/u/32721340?v=4", + "description": "A package to evaluate 3d weather and air quality models", + "topics": [ + "air-quality-model", + "atmos", + "atmosphere", + "atmospheric-chemistry", + "atmospheric-modelling", + "atmospheric-models", + "atmospheric-science", + "evaluation", + "model-evaluation", + "model-evaluation-metrics", + "wrf-chem", + "air-quality-model-evaluation" + ] }, { - "uid": "github/eEcoLiDAR/Laserfarm", - "url": "https://github.com/eEcoLiDAR/Laserfarm", - "rel": "/software/repository/github/eEcoLiDAR/Laserfarm", - "avatar": "https://avatars.githubusercontent.com/u/29599373?v=4", - "description": "Laserchicken Framework for Applications in Research in Macro-ecology", + "uid": "github/GRChombo/GRFolres", + "url": "https://github.com/GRTLCollaboration/GRFolres", + "rel": "/software/repository/github/GRChombo/GRFolres", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "Extension to GRChombo for Modified Gravity simulations", "topics": [] }, { - "uid": "github/eEcoLiDAR/laserchicken", - "url": "https://github.com/eEcoLiDAR/laserchicken", - "rel": "/software/repository/github/eEcoLiDAR/laserchicken", - "avatar": "https://avatars3.githubusercontent.com/u/29599373?v=4", - "description": null, + "uid": "github/GRChombo/GRChombo", + "url": "https://github.com/GRChombo/GRChombo", + "rel": "/software/repository/github/GRChombo/GRChombo", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "An AMR based open-source code for numerical relativity simulations.", "topics": [] }, { - "uid": "github/Azeret/galIMF", - "url": "https://github.com/Azeret/galIMF", - "rel": "/software/repository/github/Azeret/galIMF", - "avatar": "https://avatars.githubusercontent.com/u/22130354?v=4", - "description": "Based on : Yan, Jerabkova and Kroupa (2017, A&A) and Yan, Jerabkova, Kroupa and Vazdekis (2019, A&A): a Python3 module for computing the galaxy-wide initiall stellar mass function by integrating over a whole galaxy, parametrised by star formation rate and metallicity. ", + "uid": "github/GRChombo/GRDzhadzha", + "url": "https://github.com/GRTLCollaboration/GRDzhadzha", + "rel": "/software/repository/github/GRChombo/GRDzhadzha", + "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", + "description": "A code to evolve matter on curved spacetimes with an analytic time and space dependence, e.g. black holes", "topics": [] }, { - "uid": "github/ICAMS/strucscan", - "url": "https://github.com/ICAMS/strucscan", - "rel": "/software/repository/github/ICAMS/strucscan", - "avatar": "https://avatars.githubusercontent.com/u/57955390?v=4", - "description": "A lightweight python-based framework for high-throughput material simulation", + "uid": "github/ahmedmagds/GNUVID", + "url": "https://github.com/ahmedmagds/GNUVID", + "rel": "/software/repository/github/ahmedmagds/GNUVID", + "avatar": "https://avatars.githubusercontent.com/u/18128206?v=4", + "description": "Gene Novelty Unit-based Virus Identification for SARS-CoV-2", "topics": [] }, { - "uid": "github/heracles-ec/heracles", - "url": "https://github.com/heracles-ec/heracles", - "rel": "/software/repository/github/heracles-ec/heracles", - "avatar": "https://avatars.githubusercontent.com/u/138018939?v=4", - "description": "Harmonic-space statistics on the sphere", + "uid": "github/Trybnetic/paat", + "url": "https://github.com/Trybnetic/paat", + "rel": "/software/repository/github/Trybnetic/paat", + "avatar": "https://avatars.githubusercontent.com/u/7532062?v=4", + "description": "The physical activity analysis toolbox (PAAT) is a comprehensive toolbox to analyse raw acceleration data from the hip.", "topics": [ - "astronomy", - "cosmology", - "python", - "spherical-harmonics", - "healpix", - "large-scale-structure" + "physical-activity", + "actigraphy", + "actigraph", + "accelerometry", + "hip" ] }, { - "uid": "github/ianvcaldas/smalldisco", - "url": "https://github.com/ianvcaldas/smalldisco", - "rel": "/software/repository/github/ianvcaldas/smalldisco", - "avatar": "https://avatars.githubusercontent.com/u/22592759?v=4", - "description": "Discovery of siRNA regions and small RNA tail quantification", - "topics": [] - }, - { - "uid": "github/matteobachetti/TOAextractor", - "url": "https://github.com/matteobachetti/TOAextractor", - "rel": "/software/repository/github/matteobachetti/TOAextractor", - "avatar": "https://avatars.githubusercontent.com/u/7190189?v=4", - "description": "A pipeline to extract TOAs from X-ray observations of the Crab pulsar and others. Mostly for cross-calibration purposes", + "uid": "github/ixkael/QuickSip", + "url": "https://github.com/ixkael/QuickSip", + "rel": "/software/repository/github/ixkael/QuickSip", + "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", + "description": "Pipeline to quickly project Survey Image Properties (e.g. seeing, sky noise, airmass) onto the sky into Healpix maps using flexible weighting schemes. Initially designed to produce maps of observing condition related sources of systematics for the Dark Energy Survey, but will work with any multi-epoch survey and collection of images with valid WCS information.", "topics": [] }, { - "uid": "github/mbaes/SpheCow", - "url": "https://github.com/mbaes/SpheCow", - "rel": "/software/repository/github/mbaes/SpheCow", - "avatar": "https://avatars.githubusercontent.com/u/8056588?v=4", - "description": "Flexible dynamical models for galaxies and dark matter haloes ", + "uid": "github/ixkael/Delight", + "url": "https://github.com/ixkael/Delight", + "rel": "/software/repository/github/ixkael/Delight", + "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", + "description": "Photometric redshift via Gaussian processes with physical kernels", "topics": [] }, { - "uid": "github/ParkvilleData/MetaGenePipe", - "url": "https://github.com/ParkvilleData/MetaGenePipe", - "rel": "/software/repository/github/ParkvilleData/MetaGenePipe", - "avatar": "https://avatars.githubusercontent.com/u/44953352?v=4", - "description": "MGP", + "uid": "github/ixkael/3DEX", + "url": "https://github.com/ixkael/3DEX", + "rel": "/software/repository/github/ixkael/3DEX", + "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", + "description": "3D expansions", "topics": [] }, { - "uid": "github/rvalieris/parallel-fastq-dump", - "url": "https://github.com/rvalieris/parallel-fastq-dump", - "rel": "/software/repository/github/rvalieris/parallel-fastq-dump", - "avatar": "https://avatars.githubusercontent.com/u/6310472?v=4", - "description": "parallel fastq-dump wrapper", + "uid": "github/palaimon/ipyannotator", + "url": "https://github.com/palaimon/ipyannotator", + "rel": "/software/repository/github/palaimon/ipyannotator", + "avatar": "https://avatars.githubusercontent.com/u/58658888?v=4", + "description": "the infinitely hackable annotation framework", "topics": [ - "bioinformatics" + "ipycanvas", + "nbdev", + "ipywidgets", + "voila", + "labeling", + "annotations", + "labeling-tool", + "annotation-tool" ] }, { - "uid": "github/MMV-Lab/mmv_im2im", - "url": "https://github.com/MMV-Lab/mmv_im2im", - "rel": "/software/repository/github/MMV-Lab/mmv_im2im", - "avatar": "https://avatars.githubusercontent.com/u/85467623?v=4", - "description": "Python package for deep learning based image to image transformation", + "uid": "github/danxhuber/galclassify", + "url": "https://github.com/danxhuber/galclassify", + "rel": "/software/repository/github/danxhuber/galclassify", + "avatar": "https://avatars.githubusercontent.com/u/11814175?v=4", + "description": "Perform stellar classifications using a galactic population synthesis model", "topics": [] }, { - "uid": "github/thomaswilliamsastro/mcfine", - "url": "https://github.com/thomaswilliamsastro/mcfine", - "rel": "/software/repository/github/thomaswilliamsastro/mcfine", - "avatar": "https://avatars.githubusercontent.com/u/32936518?v=4", - "description": "Muli-component, hyperfine fitting tool", + "uid": "github/danxhuber/evolstate", + "url": "https://github.com/danxhuber/evolstate", + "rel": "/software/repository/github/danxhuber/evolstate", + "avatar": "https://avatars.githubusercontent.com/u/11814175?v=4", + "description": "Assign simple evolutionary states to stars", "topics": [] }, { - "uid": "github/lkreidberg/batman", - "url": "https://github.com/lkreidberg/batman", - "rel": "/software/repository/github/lkreidberg/batman", - "avatar": "https://avatars.githubusercontent.com/u/1859463?v=4", - "description": "Fast transit light curves models in Python.", + "uid": "github/caracal-pipeline/caracal", + "url": "https://github.com/caracal-pipeline/caracal", + "rel": "/software/repository/github/caracal-pipeline/caracal", + "avatar": "https://avatars.githubusercontent.com/u/60778763?v=4", + "description": "Containerized Automated Radio Astronomy Calibration (CARACal) pipeline ", "topics": [] }, { - "uid": "github/AnkitBarik/planetMagFields", - "url": "https://github.com/AnkitBarik/planetMagFields", - "rel": "/software/repository/github/AnkitBarik/planetMagFields", - "avatar": "https://avatars.githubusercontent.com/u/13730345?v=4", - "description": "Routines to plot magnetic fields of planets in our solar system", + "uid": "github/caracal-pipeline/stimela", + "url": "https://github.com/caracal-pipeline/stimela", + "rel": "/software/repository/github/caracal-pipeline/stimela", + "avatar": "https://avatars.githubusercontent.com/u/60778763?v=4", + "description": "Stimela 2.0", "topics": [ - "plotting", - "planetary-science", - "magnetic-fields", - "planetary-data", - "planetary", - "python", - "matplotlib" + "radio-astronomy", + "pipelines" ] }, { - "uid": "github/david-deboer/radiobear", - "url": "https://github.com/david-deboer/radiobear", - "rel": "/software/repository/github/david-deboer/radiobear", - "avatar": "https://avatars.githubusercontent.com/u/4715126?v=4", - "description": "radioBEAR: radio - BErkeley Atmospheric Radiative transfer", + "uid": "github/Razumovskyy/MARFA", + "url": "https://github.com/Razumovskyy/MARFA", + "rel": "/software/repository/github/Razumovskyy/MARFA", + "avatar": "https://avatars.githubusercontent.com/u/49871805?v=4", + "description": "A streamlined Fortran tool for broad-spectrum high-resolution atmospheric absorption analysis. It provides PT-table outputs, ideal for quick integration with radiative transfer codes.", + "topics": [ + "atmospheric-modelling", + "spectroscopy", + "absorption-spectra" + ] + }, + { + "uid": "github/openvax/pyensembl", + "url": "https://github.com/openvax/pyensembl", + "rel": "/software/repository/github/openvax/pyensembl", + "avatar": "https://avatars.githubusercontent.com/u/33269729?v=4", + "description": "Python interface to access reference genome features (such as genes, transcripts, and exons) from Ensembl ", "topics": [] }, { - "uid": "github/nespinoza/mc-spam", - "url": "https://github.com/nespinoza/mc-spam", - "rel": "/software/repository/github/nespinoza/mc-spam", - "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", - "description": "MC-SPAM is an algorithm to generate limb-darkening coefficients from models that are comparable to transit photometry according to the formalism described in Espinoza & Jordan (2015)", + "uid": "github/openvax/mhcflurry", + "url": "https://github.com/openvax/mhcflurry", + "rel": "/software/repository/github/openvax/mhcflurry", + "avatar": "https://avatars.githubusercontent.com/u/33269729?v=4", + "description": "Peptide-MHC I binding affinity prediction", "topics": [] }, { - "uid": "github/nespinoza/limb-darkening", - "url": "https://github.com/nespinoza/limb-darkening", - "rel": "/software/repository/github/nespinoza/limb-darkening", - "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", - "description": "Codes to generate limb-darkening coefficients using arbitrary response functions as explained in Espinoza & Jordan (2015)", + "uid": "github/thachnguyen/CRISPRnano", + "url": "https://github.com/thachnguyen/CRISPRnano", + "rel": "/software/repository/github/thachnguyen/CRISPRnano", + "avatar": "https://avatars.githubusercontent.com/u/6381336?v=4", + "description": "A simple website analyzes CRISPR experiment for Oxford Nanopore Sequencing data.", "topics": [] }, { - "uid": "github/nespinoza/juliet", - "url": "https://github.com/nespinoza/juliet", - "rel": "/software/repository/github/nespinoza/juliet", - "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", - "description": "A versatile modelling tool for transiting and non-transiting (single and multiple) exoplanetary systems", + "uid": "github/ConnorStoneAstro/AutoProf", + "url": "https://github.com/ConnorStoneAstro/AutoProf", + "rel": "/software/repository/github/ConnorStoneAstro/AutoProf", + "avatar": "https://avatars.githubusercontent.com/u/78555321?v=4", + "description": "Automatic Isophotal solutions for galaxy images", "topics": [] }, { - "uid": "github/nespinoza/ld-exosim", - "url": "https://github.com/nespinoza/ld-exosim", - "rel": "/software/repository/github/nespinoza/ld-exosim", - "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", - "description": "Code to simulate biases introduced by using different limb-darkening laws as explained in Espinoza & Jord\u00e1n (2016)", + "uid": "github/Chenmi0619/GALMoss", + "url": "https://github.com/Chenmi0619/GALMoss", + "rel": "/software/repository/github/Chenmi0619/GALMoss", + "avatar": "https://avatars.githubusercontent.com/u/112360046?v=4", + "description": "a galaxy surface bightness fitting code via gradient descent", "topics": [] }, { - "uid": "github/nespinoza/exonailer", - "url": "https://github.com/nespinoza/exonailer", - "rel": "/software/repository/github/nespinoza/exonailer", - "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", - "description": "Tools for fitting transiting exoplanet lightcurves and radial velocities", + "uid": "github/cbottrell/realsim_ifs", + "url": "https://github.com/cbottrell/realsim_ifs", + "rel": "/software/repository/github/cbottrell/realsim_ifs", + "avatar": "https://avatars.githubusercontent.com/u/10750507?v=4", + "description": "Realistic synthetic integral field spectrscopy of galaxies from numerical simulations.", "topics": [] }, { - "uid": "github/esandford/EightBitTransit", - "url": "https://github.com/esandford/EightBitTransit", - "rel": "/software/repository/github/esandford/EightBitTransit", - "avatar": "https://avatars.githubusercontent.com/u/5023731?v=4", - "description": "Calculate light curves from pixel grids, and recover shadow images from light curves.", + "uid": "github/cbottrell/RealSim", + "url": "https://github.com/cbottrell/RealSim", + "rel": "/software/repository/github/cbottrell/RealSim", + "avatar": "https://avatars.githubusercontent.com/u/10750507?v=4", + "description": "RealSim is the statistical observational realism suite described in Bottrell et al 2017ab and made public in Bottrell et al 2019b.", "topics": [] }, { - "uid": "github/david-barnett/microViz", - "url": "https://github.com/david-barnett/microViz", - "rel": "/software/repository/github/david-barnett/microViz", - "avatar": "https://avatars.githubusercontent.com/u/33695702?v=4", - "description": "R package for microbiome data visualization. Uses phyloseq, vegan and tidyverse. See website link for docs with visual examples. Docker image available.", + "uid": "github/vfonov/DARQ", + "url": "https://github.com/vfonov/DARQ", + "rel": "/software/repository/github/vfonov/DARQ", + "avatar": "https://avatars.githubusercontent.com/u/628822?v=4", + "description": "Deep learning of quality control for stereotaxic registration of human brain MRI", "topics": [ - "microbiome", - "microbiome-analysis", - "microbiota", - "rstats", - "r" + "deep-learning", + "pytorch", + "mri", + "registration", + "qc" ] }, { - "uid": "github/HannahMDoherty/ChemGAPP", - "url": "https://github.com/HannahMDoherty/ChemGAPP", - "rel": "/software/repository/github/HannahMDoherty/ChemGAPP", - "avatar": "https://avatars.githubusercontent.com/u/92042396?v=4", - "description": "A package and series of Streamlit apps for analysing chemical genomic screen data", + "uid": "github/CompGenomeLab/boquila", + "url": "https://github.com/CompGenomeLab/boquila", + "rel": "/software/repository/github/CompGenomeLab/boquila", + "avatar": "https://avatars.githubusercontent.com/u/57796291?v=4", + "description": "NGS read simulator to eliminate read nucleotide bias in sequence analysis.", "topics": [] }, { - "uid": "github/ChemaPalencia/M_SMiLe", - "url": "https://github.com/ChemaPalencia/M_SMiLe", - "rel": "/software/repository/github/ChemaPalencia/M_SMiLe", - "avatar": "https://avatars.githubusercontent.com/u/100603350?v=4", - "description": "Code to provide approximate magnification probability distributions under microlensing by compact objects such as stars or PBHs of strongly lensed stars.", + "uid": "github/pkestene/xsmurf", + "url": "https://github.com/pkestene/xsmurf", + "rel": "/software/repository/github/pkestene/xsmurf", + "avatar": "https://avatars.githubusercontent.com/u/8276295?v=4", + "description": "a wavelet-based multifractal image analysis tool implementing the WTMM (Wavelet Transform Modulus Maxima) method.", "topics": [ - "dark-matter", - "gravitational-lensing", - "microlensing", - "primordial-black-holes", - "strong-lensing", - "high-redshift-stars" + "multifractal-analysis", + "tcl", + "wavelet", + "modulus-maxima", + "tk", + "continuous-wavelet", + "fractal", + "multifractal", + "wtmm", + "singularity-spectrum", + "monofractal", + "turbulence", + "holder-exponent" ] }, { - "uid": "github/RTIP/artip", - "url": "https://github.com/RTIP/artip", - "rel": "/software/repository/github/RTIP/artip", - "avatar": "https://avatars.githubusercontent.com/u/34025575?v=4", - "description": "Automated Radio Telescope Imaging Pipeline", + "uid": "github/pkestene/ramsesGPU", + "url": "https://github.com/pkestene/ramsesGPU", + "rel": "/software/repository/github/pkestene/ramsesGPU", + "avatar": "https://avatars.githubusercontent.com/u/8276295?v=4", + "description": "Astrophysics MHD simulation code optimized for large cluster of GPU", "topics": [ - "radio-astronomy", - "measurement-set", - "casa", - "pipeline", - "python", - "gmrt", - "radio-telescopes", - "automated" + "cuda", + "gpu", + "gpu-acceleration", + "gpgpu", + "mhd", + "cfd", + "hydrodynamics", + "finite-volume", + "parallel-computing", + "hpc", + "astrophysics", + "kelvin-helmholtz-instability", + "hdf5", + "pnetcdf", + "turbulence", + "shearing-box", + "muscl-hancock", + "conservation-law", + "euler-equations", + "rayleigh-taylor" ] }, { - "uid": "github/zheng-lh/UBER", - "url": "https://github.com/zheng-lh/UBER", - "rel": "/software/repository/github/zheng-lh/UBER", - "avatar": "https://avatars.githubusercontent.com/u/81456511?v=4", - "description": "Universal Boltzmann Equation Solver", - "topics": [] + "uid": "github/SkywalkerLuke/TransHLA", + "url": "https://github.com/SkywalkerLuke/TransHLA", + "rel": "/software/repository/github/SkywalkerLuke/TransHLA", + "avatar": "https://avatars.githubusercontent.com/u/86698972?v=4", + "description": "TransHLA: A hybrid transformer model for peptide-HLA epitope detection.", + "topics": [ + "epitope", + "hla", + "transformers", + "llms" + ] }, { - "uid": "github/rhenkin/visxhclust", - "url": "https://github.com/rhenkin/visxhclust", - "rel": "/software/repository/github/rhenkin/visxhclust", - "avatar": "https://avatars.githubusercontent.com/u/1545093?v=4", - "description": "A Shiny app and functions for visual exploration of hierarchical clustering.", + "uid": "github/parthenon-hpc-lab/parthenon", + "url": "https://github.com/parthenon-hpc-lab/parthenon", + "rel": "/software/repository/github/parthenon-hpc-lab/parthenon", + "avatar": "https://avatars.githubusercontent.com/u/115286644?v=4", + "description": "Parthenon AMR infrastructure ", "topics": [] }, { - "uid": "github/HEML/HEML", - "url": "https://github.com/HEML/HEML", - "rel": "/software/repository/github/HEML/HEML", - "avatar": "https://avatars2.githubusercontent.com/u/15981568?v=4", - "description": "Open Source v1 for the Hyper-Elastic Mass Links (HEML) software", + "uid": "github/PGB-LIV/MHCVision", + "url": "https://github.com/PGB-LIV/MHCVision", + "rel": "/software/repository/github/PGB-LIV/MHCVision", + "avatar": "https://avatars.githubusercontent.com/u/22961411?v=4", + "description": "FDR/PEP estimation for MHC-peptide binding prediction", "topics": [] }, { - "uid": "github/amrex-astro/MAESTRO", - "url": "https://github.com/AMReX-Astro/MAESTRO", - "rel": "/software/repository/github/amrex-astro/MAESTRO", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "A low Mach number stellar hydrodynamics code", + "uid": "github/devries/analytic_infall", + "url": "https://github.com/devries/analytic_infall", + "rel": "/software/repository/github/devries/analytic_infall", + "avatar": "https://avatars.githubusercontent.com/u/1096938?v=4", + "description": "Analytic 1-D radiative transfer model of blue-asymmetric spectral line profiles from infalling molecular clouds. The model is presented in the paper, \"Molecular Line Profile Fitting with Analytic Radiative Transfer Models\" by De Vries & Myers (2005).", "topics": [ - "hydrodynamics", - "reactions", - "cfd", - "pde", - "low-mach", - "amr", - "adaptive-mesh-refinement", - "maestro", - "astrophysics", - "astrophysical-simulation", - "simulation" + "radiative-transfer", + "c", + "star-formation", + "interstellar-medium" ] }, { - "uid": "github/amrex-astro/Nyx", - "url": "https://github.com/AMReX-Astro/Nyx", - "rel": "/software/repository/github/amrex-astro/Nyx", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "An adaptive mesh, N-body hydro cosmological simulation code", - "topics": [] - }, - { - "uid": "github/amrex-astro/Castro", - "url": "https://github.com/AMReX-Astro/Castro", - "rel": "/software/repository/github/amrex-astro/Castro", - "avatar": "https://avatars1.githubusercontent.com/u/28324385?v=4", - "description": "An adaptive mesh, astrophysical compressible (radiation-, magneto-) hydrodynamics simulation code for massively parallel CPU and GPU architectures.", + "uid": "github/sneumann/xcms", + "url": "https://github.com/sneumann/xcms", + "rel": "/software/repository/github/sneumann/xcms", + "avatar": "https://avatars.githubusercontent.com/u/195385?v=4", + "description": "This is the git repository matching the Bioconductor package xcms: LC/MS and GC/MS Data Analysis", "topics": [ - "hydrodynamics", - "cfd", - "pde", - "gravity", - "radiation", - "castro", - "amr", - "adaptive-mesh-refinement", - "reactions", - "astrophysical-simulation", - "astrophysics" + "bioconductor", + "metabolomics", + "mass-spectrometry", + "peak-detection", + "feature-detection", + "r" ] }, { - "uid": "github/Glogobyte/miRGalaxy", - "url": "https://github.com/Glogobyte/miRGalaxy", - "rel": "/software/repository/github/Glogobyte/miRGalaxy", - "avatar": "https://avatars.githubusercontent.com/u/48248704?v=4", - "description": "miRGalaxy: a Galaxy\u2011based framework for interactive analysis of microRNA and isomiR sequencing data", + "uid": "github/JinxinMonash/PhageGE", + "url": "https://github.com/JinxinMonash/PhageGE", + "rel": "/software/repository/github/JinxinMonash/PhageGE", + "avatar": "https://avatars.githubusercontent.com/u/24647078?v=4", + "description": "Phage Genome Exploration", + "topics": [] + }, + { + "uid": "github/fair-workflows/nanopub", + "url": "https://github.com/fair-workflows/nanopub", + "rel": "/software/repository/github/fair-workflows/nanopub", + "avatar": "https://avatars3.githubusercontent.com/u/36536864?v=4", + "description": "Python client for searching, publishing and modifying nanopublications.", "topics": [ - "mirnas", - "isomirs", - "docker", - "galaxy" + "nanopublications" ] }, { - "uid": "github/daddeptr/Needlets", - "url": "https://github.com/daddeptr/Needlets", - "rel": "/software/repository/github/daddeptr/Needlets", - "avatar": "https://avatars.githubusercontent.com/u/6753577?v=4", - "description": null, + "uid": "github/fair-workflows/NanopubJL", + "url": "https://github.com/fair-workflows/NanopubJL", + "rel": "/software/repository/github/fair-workflows/NanopubJL", + "avatar": "https://avatars.githubusercontent.com/u/36536864?v=4", + "description": "JupyterLab extension to aid in searching and publishing of Nanopublications in a python notebook", "topics": [] }, { - "uid": "github/ewatercycle/era5cli", - "url": "https://github.com/eWaterCycle/era5cli", - "rel": "/software/repository/github/ewatercycle/era5cli", - "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", - "description": "Command Line Interface to download ERA5 from Copernicus Climate Data Service", + "uid": "github/fair-workflows/fairworkflows", + "url": "https://github.com/fair-workflows/fairworkflows", + "rel": "/software/repository/github/fair-workflows/fairworkflows", + "avatar": "https://avatars.githubusercontent.com/u/36536864?v=4", + "description": "A python library for constructing, modifying and publishing scientific workflows described using semantic technologies.", "topics": [] }, { - "uid": "github/GBLille/MassiveFold", - "url": "https://github.com/GBLille/MassiveFold", - "rel": "/software/repository/github/GBLille/MassiveFold", - "avatar": "https://avatars.githubusercontent.com/u/51077128?v=4", - "description": null, + "uid": "github/fast-data-transfer/fdt", + "url": "https://github.com/fast-data-transfer/fdt", + "rel": "/software/repository/github/fast-data-transfer/fdt", + "avatar": "https://avatars.githubusercontent.com/u/30577958?v=4", + "description": "FDT is an Application for Efficient Data Transfers which is capable of reading and writing at disk speed over wide area networks (with standard TCP). It is written in Java, runs an all major platforms and it is easy to use. FDT is based on an asynchronous, flexible multithreaded system and is using the capabilities of the Java NIO libraries.", "topics": [] }, { - "uid": "github/dominic-chang/Krang.jl", - "url": "https://github.com/dominic-chang/Krang.jl", - "rel": "/software/repository/github/dominic-chang/Krang.jl", - "avatar": "https://avatars.githubusercontent.com/u/12768908?v=4", - "description": "Fast analytic raytracing around Kerr black holes", - "topics": [ - "black-hole", - "general-relativity", - "julia", - "kerr", - "raytracer", - "raytracing", - "automatic-differentiation", - "gpu-acceleration" - ] - }, - { - "uid": "github/labcbb/SqueezeCall", - "url": "https://github.com/labcbb/SqueezeCall", - "rel": "/software/repository/github/labcbb/SqueezeCall", - "avatar": "https://avatars.githubusercontent.com/u/192578463?v=4", + "uid": "github/online-behaviour/find-journalists", + "url": "https://github.com/online-behaviour/find-journalists", + "rel": "/software/repository/github/online-behaviour/find-journalists", + "avatar": "https://avatars3.githubusercontent.com/u/26790167?v=4", "description": null, "topics": [] }, { - "uid": "github/zarr-developers/zarr-python", - "url": "https://github.com/zarr-developers/zarr-python", - "rel": "/software/repository/github/zarr-developers/zarr-python", - "avatar": "https://avatars0.githubusercontent.com/u/35050297?v=4", - "description": "An implementation of chunked, compressed, N-dimensional arrays for Python.", + "uid": "github/online-behaviour/machine-learning", + "url": "https://github.com/online-behaviour/machine-learning", + "rel": "/software/repository/github/online-behaviour/machine-learning", + "avatar": "https://avatars3.githubusercontent.com/u/26790167?v=4", + "description": "Python scripts for tweet retrieval and machine learning in the eScience project Automated Analysis of Online Behaviour on Social Media", "topics": [] }, { - "uid": "github/Cosmoglobe/zodipy", - "url": "https://github.com/Cosmoglobe/zodipy", - "rel": "/software/repository/github/Cosmoglobe/zodipy", - "avatar": "https://avatars.githubusercontent.com/u/70703518?v=4", - "description": "Zodiacal emission simulations in timestreams or HEALPix for solar system observers.", + "uid": "github/sdss/marvin", + "url": "https://github.com/sdss/marvin", + "rel": "/software/repository/github/sdss/marvin", + "avatar": "https://avatars.githubusercontent.com/u/22940388?v=4", + "description": "Data access and visualization for MaNGA. http://sdss-marvin.readthedocs.io/en/latest/", "topics": [ - "python", "astronomy", - "simulation", - "cmb", - "planetary-science", - "solar-system" + "manga", + "marvin", + "sdss" ] }, { - "uid": "github/SPARC-X/SPARC-X-API", - "url": "https://github.com/SPARC-X/SPARC-X-API", - "rel": "/software/repository/github/SPARC-X/SPARC-X-API", - "avatar": "https://avatars.githubusercontent.com/u/43963198?v=4", - "description": null, + "uid": "github/AndreinaCastillo/Genie_manuscript_data_analysis", + "url": "https://github.com/AndreinaCastillo/Genie_manuscript_data_analysis", + "rel": "/software/repository/github/AndreinaCastillo/Genie_manuscript_data_analysis", + "avatar": "https://avatars.githubusercontent.com/u/23280243?v=4", + "description": "Repository containing R code for the analysis of student pre- and post-recitation responses ", "topics": [] }, { - "uid": "github/elnjensen/Tapir", - "url": "https://github.com/elnjensen/Tapir", - "rel": "/software/repository/github/elnjensen/Tapir", - "avatar": "https://avatars.githubusercontent.com/u/2545845?v=4", - "description": "Tools for planning astronomical observations (transit visibility, airmass plots, finding charts)", - "topics": [] + "uid": "github/Nicole-DH/ACP-MLC", + "url": "https://github.com/Nicole-DH/ACP-MLC", + "rel": "/software/repository/github/Nicole-DH/ACP-MLC", + "avatar": "https://avatars.githubusercontent.com/u/58495382?v=4", + "description": "ACP-MLC: A two-level prediction engine for identification of anticancer peptides and multi-label classification of their functional types", + "topics": [ + "anticancer-peptides", + "machine-learning", + "multilabel-classification", + "sequence-analysis" + ] }, { - "uid": "github/smandal97/Sprout", - "url": "https://github.com/smandal97/Sprout", - "rel": "/software/repository/github/smandal97/Sprout", - "avatar": "https://avatars.githubusercontent.com/u/63262399?v=4", - "description": "Sprout is a finite volume hydro code based on the moving mesh approach. It uses a simple expanding Cartesian grid to track outflows for several orders of magnitudes in expansion.", + "uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", + "url": "https://github.com/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", + "rel": "/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", + "avatar": "https://avatars.githubusercontent.com/u/85877376?v=4", + "description": "GEO Cancer Prognostic Datasets Retriever is a bioinformatics tool for cancer prognostic dataset retrieval from the GEO website.", "topics": [] }, { - "uid": "github/paulmorio/gincco", - "url": "https://github.com/paulmorio/gincco", - "rel": "/software/repository/github/paulmorio/gincco", - "avatar": "https://avatars.githubusercontent.com/u/3254542?v=4", - "description": "Source code for GINCCo Paper", + "uid": "github/KolmogorovLab/Severus", + "url": "https://github.com/KolmogorovLab/Severus", + "rel": "/software/repository/github/KolmogorovLab/Severus", + "avatar": "https://avatars.githubusercontent.com/u/115726369?v=4", + "description": "A tool for somatic structural variant calling using long reads", "topics": [] }, { - "uid": "github/kylemede/ExoSOFT", - "url": "https://github.com/kylemede/ExoSOFT", - "rel": "/software/repository/github/kylemede/ExoSOFT", - "avatar": "https://avatars.githubusercontent.com/u/5855140?v=4", - "description": "The Exoplanet Simple Orbit Fitting Toolbox (ExoSOFT). Solves for the orbital elements of any single companion, provided observed radial velocity and/or astrometry.", + "uid": "github/chandra-marx/marxs", + "url": "https://github.com/Chandra-MARX/marxs", + "rel": "/software/repository/github/chandra-marx/marxs", + "avatar": "https://avatars.githubusercontent.com/u/10633195?v=4", + "description": "Multi-Architecture-Raytrace-Xraymission-Simulator", + "topics": [ + "python", + "raytracing", + "astronomy" + ] + }, + { + "uid": "github/jonschwenk/RivGraph", + "url": "https://github.com/jonschwenk/RivGraph", + "rel": "/software/repository/github/jonschwenk/RivGraph", + "avatar": "https://avatars.githubusercontent.com/u/14874485?v=4", + "description": "Extracting and quantifying graphical representations of river and delta channel networks from binary masks", "topics": [] }, { - "uid": "github/CaNS-World/CaNS-Fizzy", - "url": "https://github.com/CaNS-World/CaNS-Fizzy", - "rel": "/software/repository/github/CaNS-World/CaNS-Fizzy", - "avatar": "https://avatars.githubusercontent.com/u/111527101?v=4", - "description": "A code for fast, massively-parallel simulations of two-phase flows with heat transfer", - "topics": [ - "direct-numerical-simulation", - "fortran", - "gpu", - "high-performance-computing", - "multiphase-flow", - "turbulence", - "computational-fluid-dynamics", - "fluid-dynamics", - "fluid-simulation" - ] + "uid": "github/coccoinomane/song", + "url": "https://github.com/coccoinomane/song", + "rel": "/software/repository/github/coccoinomane/song", + "avatar": "https://avatars.githubusercontent.com/u/3920436?v=4", + "description": "SONG (Second Order Non-Gaussianity) is a Boltzmann code that computes many observables related to the Cosmic Microwave Background and to the cosmological perturbations at second order in perturbation theory.", + "topics": [] }, { - "uid": "github/podondra/eidein", - "url": "https://github.com/podondra/eidein", - "rel": "/software/repository/github/podondra/eidein", - "avatar": "https://avatars.githubusercontent.com/u/15136508?v=4", - "description": "Interactive tool for dimensionality reduction of spectra and their visualisation", + "uid": "github/coccoinomane/zelda", + "url": "https://github.com/coccoinomane/zelda", + "rel": "/software/repository/github/coccoinomane/zelda", + "avatar": "https://avatars.githubusercontent.com/u/3920436?v=4", + "description": "Tool to generate correlation functions & power spectra from a galaxy catalogue.", "topics": [] }, { - "uid": "github/podondra/bayesian-sznet", - "url": "https://github.com/podondra/bayesian-sznet", - "rel": "/software/repository/github/podondra/bayesian-sznet", - "avatar": "https://avatars.githubusercontent.com/u/15136508?v=4", - "description": "Bayesian deep learning to predict redshift with uncertainty", + "uid": "github/ylxu05/HN-PPISP", + "url": "https://github.com/ylxu05/HN-PPISP", + "rel": "/software/repository/github/ylxu05/HN-PPISP", + "avatar": "https://avatars.githubusercontent.com/u/107735788?v=4", + "description": null, "topics": [] }, { - "uid": "github/dpryan79/MethylDackel", - "url": "https://github.com/dpryan79/MethylDackel", - "rel": "/software/repository/github/dpryan79/MethylDackel", - "avatar": "https://avatars.githubusercontent.com/u/6399000?v=4", - "description": "A (mostly) universal methylation extractor for BS-seq experiments.", + "uid": "github/stegmaja/TSE", + "url": "https://github.com/stegmaja/TSE", + "rel": "/software/repository/github/stegmaja/TSE", + "avatar": "https://avatars.githubusercontent.com/u/58080521?v=4", + "description": "Triple stellar evolution code", "topics": [ - "methylation", - "bioinformatics", - "methylation-extraction", - "bisulfite" + "astrophysics", + "black-holes", + "dynamics", + "gravitational-waves", + "stellar-evolution", + "three-body-problem", + "three-body-simulation", + "lidov-kozai" ] }, { - "uid": "github/dpryan79/pyBigWig", - "url": "https://github.com/deeptools/pyBigWig", - "rel": "/software/repository/github/dpryan79/pyBigWig", - "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", - "description": "A python extension for quick access to bigWig and bigBed files", - "topics": [ - "bigwig", - "bioinfomatics", - "bigbed" - ] + "uid": "github/zjupgx/modig", + "url": "https://github.com/zjupgx/modig", + "rel": "/software/repository/github/zjupgx/modig", + "avatar": "https://avatars.githubusercontent.com/u/94656251?v=4", + "description": "MODIG: Integrating Multi-Omics and Multi-Dimensional Gene Network for Cancer Driver Gene Identification based on Graph Attention Network Model", + "topics": [] }, { - "uid": "github/dpryan79/libBigWig", - "url": "https://github.com/dpryan79/libBigWig", - "rel": "/software/repository/github/dpryan79/libBigWig", - "avatar": "https://avatars.githubusercontent.com/u/6399000?v=4", - "description": "A C library for handling bigWig files", - "topics": [ - "bigbed", - "bigwig", - "bioinformatics" - ] + "uid": "github/Crompulence/cpl-library", + "url": "https://github.com/Crompulence/cpl-library", + "rel": "/software/repository/github/Crompulence/cpl-library", + "avatar": "https://avatars.githubusercontent.com/u/13557676?v=4", + "description": null, + "topics": [] }, { - "uid": "github/RabadanLab/arcasHLA", - "url": "https://github.com/RabadanLab/arcasHLA", - "rel": "/software/repository/github/RabadanLab/arcasHLA", - "avatar": "https://avatars.githubusercontent.com/u/7584451?v=4", - "description": "Fast and accurate in silico inference of HLA genotypes from RNA-seq", + "uid": "github/agurvich/FIRE_studio", + "url": "https://github.com/agurvich/FIRE_studio", + "rel": "/software/repository/github/agurvich/FIRE_studio", + "avatar": "https://avatars.githubusercontent.com/u/7799423?v=4", + "description": "Movie Making Utilities for FIRE simulations", "topics": [] }, { - "uid": "github/TeamLEGWORK/LEGWORK", - "url": "https://github.com/TeamLEGWORK/LEGWORK", - "rel": "/software/repository/github/TeamLEGWORK/LEGWORK", - "avatar": "https://avatars.githubusercontent.com/u/88508559?v=4", - "description": "simple package for gravitational wave calculations ", + "uid": "github/wilsonrljr/sysidentpy", + "url": "https://github.com/wilsonrljr/sysidentpy", + "rel": "/software/repository/github/wilsonrljr/sysidentpy", + "avatar": "https://avatars1.githubusercontent.com/u/13462356?v=4", + "description": "A Python package for System Identification using NARMAX models", "topics": [] }, { - "uid": "github/rehamelkholy/NutMaat", - "url": "https://github.com/rehamelkholy/NutMaat", - "rel": "/software/repository/github/rehamelkholy/NutMaat", - "avatar": "https://avatars.githubusercontent.com/u/39960662?v=4", - "description": "A Python library for classifying stellar spectra based on the MKCLASS package", + "uid": "github/rcsb/mmtf-python", + "url": "https://github.com/rcsb/mmtf-python", + "rel": "/software/repository/github/rcsb/mmtf-python", + "avatar": "https://avatars.githubusercontent.com/u/4259216?v=4", + "description": "The python implementation of the MMTF API, decoder and encoder.", "topics": [] }, { - "uid": "github/carrerajimenez/pyCatIndex", - "url": "https://github.com/carrerajimenez/pyCatIndex", - "rel": "/software/repository/github/carrerajimenez/pyCatIndex", - "avatar": "https://avatars.githubusercontent.com/u/51076902?v=4", - "description": "Determination of CaT line strength", + "uid": "github/918particle/AskaryanModule", + "url": "https://github.com/918particle/AskaryanModule", + "rel": "/software/repository/github/918particle/AskaryanModule", + "avatar": "https://avatars.githubusercontent.com/u/15349365?v=4", + "description": null, "topics": [] }, { - "uid": "github/FreBio/komics", - "url": "https://github.com/FreBio/komics", - "rel": "/software/repository/github/FreBio/komics", - "avatar": "https://avatars.githubusercontent.com/u/7162054?v=4", - "description": "Kinetoplast genOMICS", + "uid": "github/astronomyk/SimCADO", + "url": "https://github.com/astronomyk/SimCADO", + "rel": "/software/repository/github/astronomyk/SimCADO", + "avatar": "https://avatars.githubusercontent.com/u/9432898?v=4", + "description": null, "topics": [] }, { - "uid": "github/s-goldman/Dusty-Evolved-Star-Kit", - "url": "https://github.com/s-goldman/Dusty-Evolved-Star-Kit", - "rel": "/software/repository/github/s-goldman/Dusty-Evolved-Star-Kit", - "avatar": "https://avatars3.githubusercontent.com/u/32876747?v=4", - "description": "SED-fitting python package for fitting evolved stars", + "uid": "github/VarStarDetect/varstardetect", + "url": "https://github.com/VarStarDetect/varstardetect", + "rel": "/software/repository/github/VarStarDetect/varstardetect", + "avatar": "https://avatars.githubusercontent.com/u/89477120?v=4", + "description": null, "topics": [] }, { - "uid": "github/sb-ncbr/golem", - "url": "https://github.com/sb-ncbr/golem", - "rel": "/software/repository/github/sb-ncbr/golem", - "avatar": "https://avatars.githubusercontent.com/u/108478300?v=4", - "description": "GOLEM: distribution of Gene regulatOry eLEMents within the plant promoters", + "uid": "github/e-koch/FilFinder", + "url": "https://github.com/e-koch/FilFinder", + "rel": "/software/repository/github/e-koch/FilFinder", + "avatar": "https://avatars.githubusercontent.com/u/3255771?v=4", + "description": "Detection of filamentary structure in molecular clouds", "topics": [] }, { - "uid": "github/JoshSchramm94/validateHOT", - "url": "https://github.com/JoshSchramm94/validateHOT", - "rel": "/software/repository/github/JoshSchramm94/validateHOT", - "avatar": "https://avatars.githubusercontent.com/u/93316398?v=4", - "description": "\ud83c\udfaf Validate your Holdout Task and other tools for preference measurement techniques", + "uid": "github/PedroBarbosa/VETA", + "url": "https://github.com/PedroBarbosa/VETA", + "rel": "/software/repository/github/PedroBarbosa/VETA", + "avatar": "https://avatars.githubusercontent.com/u/4269608?v=4", + "description": "VETA - A simple tool do evaluate variant predictors", "topics": [] }, { - "uid": "github/hsso/crete", - "url": "https://github.com/hsso/crete", - "rel": "/software/repository/github/hsso/crete", - "avatar": "https://avatars.githubusercontent.com/u/8900031?v=4", - "description": "Comet RadiativE Transfer and Excitation", + "uid": "github/kdmurray91/axe", + "url": "https://github.com/kdm9/axe", + "rel": "/software/repository/github/kdmurray91/axe", + "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", + "description": "Rapid competitive read demulitplexer. Made with tries.", "topics": [] }, { - "uid": "github/tBilby/tBilby", - "url": "https://github.com/tBilby/tBilby", - "rel": "/software/repository/github/tBilby/tBilby", - "avatar": "https://avatars.githubusercontent.com/u/163959154?v=4", - "description": null, + "uid": "github/kdmurray91/libqcpp", + "url": "https://github.com/kdm9/libqcpp", + "rel": "/software/repository/github/kdmurray91/libqcpp", + "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", + "description": "libqc++: C++11 library for next-gen sequence quality control and assessment.", "topics": [] }, { - "uid": "github/lab-medvedeva/GADES-main", - "url": "https://github.com/lab-medvedeva/GADES-main", - "rel": "/software/repository/github/lab-medvedeva/GADES-main", - "avatar": "https://avatars.githubusercontent.com/u/79700862?v=4", - "description": null, + "uid": "github/kdmurray91/libqes", + "url": "https://github.com/kdm9/libqes", + "rel": "/software/repository/github/kdmurray91/libqes", + "avatar": "https://avatars.githubusercontent.com/u/1560490?v=4", + "description": "A small C library, with a bioinformatic focus. Optimised for speed and a clean API", "topics": [] }, { - "uid": "github/rksyouyou/SASOM-analysis", - "url": "https://github.com/rksyouyou/SASOM-analysis", - "rel": "/software/repository/github/rksyouyou/SASOM-analysis", - "avatar": "https://avatars.githubusercontent.com/u/5146962?v=4", - "description": "code and data for real data analysis in SASOM paper", + "uid": "github/agombolay/ribose-map", + "url": "https://github.com/agombolay/ribose-map", + "rel": "/software/repository/github/agombolay/ribose-map", + "avatar": "https://avatars.githubusercontent.com/u/13037968?v=4", + "description": null, "topics": [] }, { - "uid": "github/ks905383/xagg", - "url": "https://github.com/ks905383/xagg", - "rel": "/software/repository/github/ks905383/xagg", - "avatar": "https://avatars.githubusercontent.com/u/16925278?v=4", - "description": "Aggregating gridded data (xarray) to polygons", + "uid": "github/brainglobe/bg-atlasapi", + "url": "https://github.com/brainglobe/bg-atlasapi", + "rel": "/software/repository/github/brainglobe/bg-atlasapi", + "avatar": "https://avatars1.githubusercontent.com/u/64580400?v=4", + "description": "A lightweight python module to interact with atlases for systems neuroscience", "topics": [ - "aggregation", - "polygon", + "neuroscience", "python", - "raster-data", - "xarray" + "microscopy", + "registration", + "visualisation", + "brain", + "atlases" ] }, { - "uid": "github/Wytamma/snk", - "url": "https://github.com/Wytamma/snk", - "rel": "/software/repository/github/Wytamma/snk", - "avatar": "https://avatars.githubusercontent.com/u/13726005?v=4", - "description": "Snakemake workflow management system and CLI generation tool", + "uid": "github/bvalot/pyMLST", + "url": "https://github.com/bvalot/pyMLST", + "rel": "/software/repository/github/bvalot/pyMLST", + "avatar": "https://avatars.githubusercontent.com/u/16573222?v=4", + "description": "whole genome MLST analysis ", "topics": [] }, { - "uid": "github/Dylan-Aliberti/Kepler-Collisions", - "url": "https://github.com/Dylan-Aliberti/Kepler-Collisions", - "rel": "/software/repository/github/Dylan-Aliberti/Kepler-Collisions", - "avatar": "https://avatars.githubusercontent.com/u/112291944?v=4", - "description": "Code used for testing the the analytic propagator.", + "uid": "github/emsig/elfe3D", + "url": "https://github.com/emsig/elfe3D", + "rel": "/software/repository/github/emsig/elfe3D", + "avatar": "https://avatars.githubusercontent.com/u/27303180?v=4", + "description": "Modelling with the total electric field approach using finite elements in 3-D", "topics": [] }, { - "uid": "github/danxhuber/galclassify", - "url": "https://github.com/danxhuber/galclassify", - "rel": "/software/repository/github/danxhuber/galclassify", - "avatar": "https://avatars.githubusercontent.com/u/11814175?v=4", - "description": "Perform stellar classifications using a galactic population synthesis model", - "topics": [] + "uid": "github/glasgowlab/MAGPIE", + "url": "https://github.com/glasgowlab/MAGPIE", + "rel": "/software/repository/github/glasgowlab/MAGPIE", + "avatar": "https://avatars.githubusercontent.com/u/98300418?v=4", + "description": "MAGPIE", + "topics": [ + "interactive-visualizations", + "protein-protein-interaction", + "sequence-logo", + "protein-ligand-interaction" + ] }, { - "uid": "github/danxhuber/evolstate", - "url": "https://github.com/danxhuber/evolstate", - "rel": "/software/repository/github/danxhuber/evolstate", - "avatar": "https://avatars.githubusercontent.com/u/11814175?v=4", - "description": "Assign simple evolutionary states to stars", + "uid": "github/dingshandeng/diskmint", + "url": "https://github.com/DingshanDeng/DiskMINT", + "rel": "/software/repository/github/dingshandeng/diskmint", + "avatar": "https://avatars.githubusercontent.com/u/88793427?v=4", + "description": "DiskMINT (Disk Model For INdividual Targets): a tool to estimate disk masses with CO isotopologues", "topics": [] }, { - "uid": "github/GeneDx/scramble", - "url": "https://github.com/GeneDx/scramble", - "rel": "/software/repository/github/GeneDx/scramble", - "avatar": "https://avatars.githubusercontent.com/u/43077724?v=4", - "description": "runs as a two-step process. First cluster_identifier is used to generate soft-clipped read cluster consensus sequences. Second, SCRAMBle-MEIs.R analyzes the cluster file for likely Mobile Element Insertions.", + "uid": "github/forceflow1049/phast", + "url": "https://github.com/forceflow1049/PhAst", + "rel": "/software/repository/github/forceflow1049/phast", + "avatar": "https://avatars.githubusercontent.com/u/1127046?v=4", + "description": "PhAst: A flexible IDL astronomical image viewer", "topics": [] }, { - "uid": "github/tyo-nu/MINE-app", - "url": "https://github.com/tyo-nu/MINE-app", - "rel": "/software/repository/github/tyo-nu/MINE-app", - "avatar": "https://avatars.githubusercontent.com/u/25189699?v=4", - "description": "Web application for the MINE databases", + "uid": "github/bcgsc/ntCard", + "url": "https://github.com/bcgsc/ntCard", + "rel": "/software/repository/github/bcgsc/ntCard", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Estimating k-mer coverage histogram of genomics data", "topics": [ - "cheminformatics", - "metabolomics" + "cardinality-estimation", + "k-mer-counting", + "k-mer-frequency", + "hyperloglog", + "streaming-algorithms" ] }, { - "uid": "github/tyo-nu/pickaxe_paper", - "url": "https://github.com/tyo-nu/pickaxe_paper", - "rel": "/software/repository/github/tyo-nu/pickaxe_paper", - "avatar": "https://avatars.githubusercontent.com/u/25189699?v=4", - "description": null, + "uid": "github/bcgsc/TMBur", + "url": "https://github.com/bcgsc/TMBur", + "rel": "/software/repository/github/bcgsc/TMBur", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Derive TMB estimates from whole genome fastq files. Runs alignment and variant calling before reporting a variety of TMB estimates", "topics": [] }, { - "uid": "github/muctadir/lama", - "url": "https://github.com/muctadir/lama", - "rel": "/software/repository/github/muctadir/lama", - "avatar": "https://avatars.githubusercontent.com/u/2332130?v=4", - "description": "LaMa, short for Labelling Machine, is an web application developed for aiding in thematic analysis of qualitative data. ", + "uid": "github/bcgsc/btllib", + "url": "https://github.com/bcgsc/btllib", + "rel": "/software/repository/github/bcgsc/btllib", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Bioinformatics Technology Lab common code library", "topics": [ - "angular", - "docker", + "bioinformatics", + "genome", + "library", + "cpp", "python", - "qualitative-research", - "thematic-analysis", - "qualitative-analysis", - "text-labeling" + "bloom-filter", + "algorithms", + "data-structures" ] }, { - "uid": "github/davidemms/OrthoFinder", - "url": "https://github.com/davidemms/OrthoFinder", - "rel": "/software/repository/github/davidemms/OrthoFinder", - "avatar": "https://avatars.githubusercontent.com/u/13098041?v=4", - "description": "Phylogenetic orthology inference for comparative genomics", + "uid": "github/bcgsc/goldrush", + "url": "https://github.com/bcgsc/goldrush", + "rel": "/software/repository/github/bcgsc/goldrush", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Linear-time de novo Long Read Assembler", "topics": [ - "gene-trees", - "orthogroup", - "orthologs", - "gene-duplication" + "bioinformatics", + "bioinformatics-tool", + "genome-assembly", + "long-read-sequencing" ] }, { - "uid": "github/Caltech-IPAC/Montage", - "url": "https://github.com/Caltech-IPAC/Montage", - "rel": "/software/repository/github/Caltech-IPAC/Montage", - "avatar": "https://avatars.githubusercontent.com/u/9708378?v=4", - "description": "Image Mosaics for Astronomers", + "uid": "github/bcgsc/longstitch", + "url": "https://github.com/bcgsc/LongStitch", + "rel": "/software/repository/github/bcgsc/longstitch", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Correct and scaffold assemblies using long reads", "topics": [] }, { - "uid": "github/Caltech-IPAC/kete", - "url": "https://github.com/Caltech-IPAC/kete", - "rel": "/software/repository/github/Caltech-IPAC/kete", - "avatar": "https://avatars.githubusercontent.com/u/9708378?v=4", - "description": "Kete Solar System Survey tools", - "topics": [] + "uid": "github/bcgsc/arcs", + "url": "https://github.com/bcgsc/arcs", + "rel": "/software/repository/github/bcgsc/arcs", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "\ud83c\udf08Scaffold genome sequence assemblies using linked read sequencing data", + "topics": [ + "c-plus-plus", + "science", + "bioinformatics", + "assembler", + "scaffold", + "genome", + "10xgenomics", + "graph" + ] }, { - "uid": "github/akashdhruv/BoxKit", - "url": "https://github.com/Box-Tools/BoxKit", - "rel": "/software/repository/github/akashdhruv/BoxKit", - "avatar": "https://avatars.githubusercontent.com/u/99517266?v=4", - "description": "A Python library to manage analysis of block-structured simulation datasets.", - "topics": [] + "uid": "github/bcgsc/ntHash", + "url": "https://github.com/bcgsc/ntHash", + "rel": "/software/repository/github/bcgsc/ntHash", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Fast hash function for DNA sequences", + "topics": [ + "hash-methods", + "hash-algorithm", + "k-mer-hashing", + "genomics", + "bioinformatics", + "hash", + "bloom-filter" + ] }, { - "uid": "github/llt1836/TE-HI-GCN", - "url": "https://github.com/llt1836/TE-HI-GCN", - "rel": "/software/repository/github/llt1836/TE-HI-GCN", - "avatar": "https://avatars.githubusercontent.com/u/71361327?v=4", - "description": null, - "topics": [] + "uid": "github/bcgsc/abyss", + "url": "https://github.com/bcgsc/abyss", + "rel": "/software/repository/github/bcgsc/abyss", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": ":microscope: Assemble large genomes using short reads", + "topics": [ + "bloom-filter", + "c-plus-plus", + "science", + "bioinformatics", + "assembler", + "scaffold", + "genome", + "openmp", + "mpi" + ] }, { - "uid": "github/WangLabTHU/DeSP", - "url": "https://github.com/WangLabTHU/DeSP", - "rel": "/software/repository/github/WangLabTHU/DeSP", - "avatar": "https://avatars.githubusercontent.com/u/66990292?v=4", - "description": "DNA-D2S: a systematic error simulation Model for DNA Data Storage channel", - "topics": [] + "uid": "github/bcgsc/NanoSim", + "url": "https://github.com/bcgsc/NanoSim", + "rel": "/software/repository/github/bcgsc/NanoSim", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "Nanopore sequence read simulator", + "topics": [ + "genome", + "transcriptome", + "simulator", + "oxford-nanopore", + "nanopore-sequencing" + ] }, { - "uid": "github/bio-ontology-research-group/deepgoplus", - "url": "https://github.com/bio-ontology-research-group/deepgoplus", - "rel": "/software/repository/github/bio-ontology-research-group/deepgoplus", - "avatar": "https://avatars.githubusercontent.com/u/11040886?v=4", - "description": "DeepGO with GOPlus axioms", - "topics": [] + "uid": "github/bcgsc/tigmint", + "url": "https://github.com/bcgsc/tigmint", + "rel": "/software/repository/github/bcgsc/tigmint", + "avatar": "https://avatars.githubusercontent.com/u/2319317?v=4", + "description": "\u26d3 Correct misassemblies using linked AND long reads", + "topics": [ + "misassembly-correction", + "genome-scaffolding", + "genome-assembly", + "linked-reads", + "10xgenomics", + "bioinformatics", + "bioinformatics-tool" + ] }, { - "uid": "github/A-Davies/LensCNN", - "url": "https://github.com/A-Davies/LensCNN", - "rel": "/software/repository/github/A-Davies/LensCNN", - "avatar": "https://avatars.githubusercontent.com/u/40608305?v=4", - "description": "A Python built Convolutional Neural Network to classify simulated images as containing a gravitational lens or not.", + "uid": "github/winni2k/abeona", + "url": "https://github.com/winni2k/abeona", + "rel": "/software/repository/github/winni2k/abeona", + "avatar": "https://avatars.githubusercontent.com/u/304958?v=4", + "description": "abeona -- Abeona is the goddess of outward graph traversal", "topics": [] }, { - "uid": "github/grdspcht/ggret", - "url": "https://github.com/grdspcht/ggret", - "rel": "/software/repository/github/grdspcht/ggret", - "avatar": "https://avatars.githubusercontent.com/u/58748614?v=4", - "description": "ggret: Visualisation of tree-based phylogenetic networks", + "uid": "github/mudit-jain90/i-SPin", + "url": "https://github.com/mudit-jain90/i-SPin", + "rel": "/software/repository/github/mudit-jain90/i-SPin", + "avatar": "https://avatars.githubusercontent.com/u/84209375?v=4", + "description": "A code to simulate multi-component Schrodinger systems (with/without gravity + with/without self interactions) obeying SO(n) symmetry", "topics": [] }, { - "uid": "github/pr2database/pr2-primers", - "url": "https://github.com/pr2database/pr2-primers", - "rel": "/software/repository/github/pr2database/pr2-primers", - "avatar": "https://avatars.githubusercontent.com/u/44997718?v=4", - "description": "Scripts for paper Vaulot et al. 2022", + "uid": "github/dask/dask", + "url": "https://github.com/dask/dask", + "rel": "/software/repository/github/dask/dask", + "avatar": "https://avatars1.githubusercontent.com/u/17131925?v=4", + "description": "Parallel computing with task scheduling", "topics": [ - "database", - "18s-rrna", - "primers", - "eukaryotes", - "taxonomy", - "metabarcoding" + "dask", + "python", + "pydata", + "numpy", + "pandas", + "scikit-learn", + "scipy" ] }, { - "uid": "github/SpaceML/GalaxyGAN", - "url": "https://github.com/SpaceML/GalaxyGAN", - "rel": "/software/repository/github/SpaceML/GalaxyGAN", - "avatar": "https://avatars.githubusercontent.com/u/25198533?v=4", - "description": null, + "uid": "github/levitsky/pyteomics", + "url": "https://github.com/levitsky/pyteomics", + "rel": "/software/repository/github/levitsky/pyteomics", + "avatar": "https://avatars.githubusercontent.com/u/3358268?v=4", + "description": "Pyteomics is a collection of lightweight and handy tools for Python that help to handle various sorts of proteomics data. Pyteomics provides a growing set of modules to facilitate the most common tasks in proteomics data analysis.", "topics": [] }, { - "uid": "github/SWIFTSIM/SOAP", - "url": "https://github.com/SWIFTSIM/SOAP", - "rel": "/software/repository/github/SWIFTSIM/SOAP", - "avatar": "https://avatars.githubusercontent.com/u/37541309?v=4", - "description": "Spherical Overdensity Aperture Processor: MPI parallel Python code to compute properties of halos in SWIFT n-body simulations", + "uid": "github/euroargodev/argopy", + "url": "https://github.com/euroargodev/argopy", + "rel": "/software/repository/github/euroargodev/argopy", + "avatar": "https://avatars1.githubusercontent.com/u/57987739?v=4", + "description": "A python library for Argo data beginners and experts", "topics": [ - "simulation", - "galaxy-evolution", - "halo-finding", - "nbody", - "cosmology" + "argo", + "python", + "argo-floats", + "oceanography", + "argo-data" ] }, { - "uid": "github/SWIFTSIM/emulator", - "url": "https://github.com/SWIFTSIM/emulator", - "rel": "/software/repository/github/SWIFTSIM/emulator", - "avatar": "https://avatars.githubusercontent.com/u/37541309?v=4", - "description": "The SWIFT simulation cosmological emulator (swift-emulator)", + "uid": "github/cellgeni/cells2visium", + "url": "https://github.com/cellgeni/cells2visium", + "rel": "/software/repository/github/cellgeni/cells2visium", + "avatar": "https://avatars.githubusercontent.com/u/34610939?v=4", + "description": "segmenting H&E images from Visium to assign each visium spot to the number of cell, occupancy and other morphological features of cells", "topics": [] }, { - "uid": "github/epruesse/SINA", - "url": "https://github.com/epruesse/SINA", - "rel": "/software/repository/github/epruesse/SINA", - "avatar": "https://avatars.githubusercontent.com/u/2774474?v=4", - "description": "SINA - Reference based multiple sequence alignment", - "topics": [ - "rrna", - "alignment", - "sequence", - "16s", - "silva", - "bioinformatics" - ] - }, - { - "uid": "github/li-yangyang/lotus", - "url": "https://github.com/Li-Yangyang/LOTUS", - "rel": "/software/repository/github/li-yangyang/lotus", - "avatar": "https://avatars.githubusercontent.com/u/20237054?v=4", - "description": "Fast tool for 1D Non-LTE stellar parameter determination via Equivalent Width method", + "uid": "github/oloBion/Retip", + "url": "https://github.com/oloBion/Retip", + "rel": "/software/repository/github/oloBion/Retip", + "avatar": "https://avatars.githubusercontent.com/u/71494435?v=4", + "description": "Retip - Retention Time prediction for metabolomics", "topics": [ - "python3", - "radiative-transfer", - "radiative-transfer-models", - "non-local-thermodynamic-equilibrium", - "stellar-physics", - "astronomy", - "astrophysics", - "spectral-analysis", - "spectroscopy", - "mcmc" + "metabolomics", + "retention-time", + "lcms" ] }, { - "uid": "github/OPM/opm-simulators", - "url": "https://github.com/OPM/opm-simulators", - "rel": "/software/repository/github/OPM/opm-simulators", - "avatar": "https://avatars.githubusercontent.com/u/1827197?v=4", - "description": "OPM Flow and experimental simulators, including components such as well models etc.", - "topics": [] - }, - { - "uid": "github/OPM/pyopmspe11", - "url": "https://github.com/OPM/pyopmspe11", - "rel": "/software/repository/github/OPM/pyopmspe11", - "avatar": "https://avatars.githubusercontent.com/u/1827197?v=4", - "description": "A Python framework using OPM Flow for the SPE11 benchmark project", + "uid": "github/JacksonBurns/astartes", + "url": "https://github.com/JacksonBurns/astartes", + "rel": "/software/repository/github/JacksonBurns/astartes", + "avatar": "https://avatars.githubusercontent.com/u/33505528?v=4", + "description": "Better Data Splits for Machine Learning", "topics": [ - "co2", - "csp11", - "flow", - "opm", - "spe11" + "ai", + "ml", + "data-science", + "machine-learning", + "sampling", + "python" ] }, { - "uid": "github/bwa-mem2/bwa-mem2", - "url": "https://github.com/bwa-mem2/bwa-mem2", - "rel": "/software/repository/github/bwa-mem2/bwa-mem2", - "avatar": "https://avatars.githubusercontent.com/u/43346774?v=4", - "description": "The next version of bwa-mem ", + "uid": "github/toruseo/UXsim", + "url": "https://github.com/toruseo/UXsim", + "rel": "/software/repository/github/toruseo/UXsim", + "avatar": "https://avatars.githubusercontent.com/u/34780089?v=4", + "description": "Vehicular traffic flow simulator in road network, written in pure Python", "topics": [ - "bioinformatics", - "genomics", - "sequence-alignment" + "traffic", + "traffic-flow", + "traffic-flow-simulation", + "traffic-simulation", + "dynamic-traffic-assignment", + "simulation", + "transportation", + "transportation-network" ] }, { - "uid": "github/stammler/dustpy", - "url": "https://github.com/stammler/dustpy", - "rel": "/software/repository/github/stammler/dustpy", - "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", - "description": "Python package for the simulation of dust evolution in protoplanetary disks.", + "uid": "github/cheerfuluser/tessreduce", + "url": "https://github.com/CheerfulUser/TESSreduce", + "rel": "/software/repository/github/cheerfuluser/tessreduce", + "avatar": "https://avatars.githubusercontent.com/u/25831737?v=4", + "description": "Transient focused reduction for TESS data", "topics": [] }, { - "uid": "github/stammler/simframe", - "url": "https://github.com/stammler/simframe", - "rel": "/software/repository/github/stammler/simframe", - "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", - "description": "Python framework for setting up and running scientific simulations. It comes with a variety of integration schemes and some infrastructure of reading and writing data files.", + "uid": "github/aadya940/chainopy", + "url": "https://github.com/aadya940/chainopy", + "rel": "/software/repository/github/aadya940/chainopy", + "avatar": "https://avatars.githubusercontent.com/u/77720426?v=4", + "description": "ChainoPy: A Python Library for Discrete Time Markov Chain based stochastic analysis", "topics": [ - "python" + "bayesian-data-analysis", + "bayesian-inference", + "bayesian-statistics", + "data-analysis", + "deep-learning", + "forecasting", + "machine-learning", + "markov-chain", + "markov-model", + "markov-process", + "time-series", + "time-series-analysis", + "data-science" ] }, { - "uid": "github/stammler/dustpylib", - "url": "https://github.com/stammler/dustpylib", - "rel": "/software/repository/github/stammler/dustpylib", - "avatar": "https://avatars.githubusercontent.com/u/21321343?v=4", - "description": "Library with auxiliary modules for DustPy", + "uid": "github/ywx649999311/vizic", + "url": "https://github.com/ywx649999311/vizic", + "rel": "/software/repository/github/ywx649999311/vizic", + "avatar": "https://avatars.githubusercontent.com/u/11515291?v=4", + "description": "A Jupyter-based Interactive Visualization Tool for Astronomical Catalogs", "topics": [ - "astrophysics", - "planetary-science", - "python" + "jupyter-notebook", + "astronomical-catalogs" ] }, { - "uid": "github/nluetts/NoisySignalIntegration.jl", - "url": "https://github.com/nluetts/NoisySignalIntegration.jl", - "rel": "/software/repository/github/nluetts/NoisySignalIntegration.jl", - "avatar": "https://avatars.githubusercontent.com/u/44254521?v=4", - "description": null, + "uid": "github/ywx649999311/EzTao", + "url": "https://github.com/ywx649999311/EzTao", + "rel": "/software/repository/github/ywx649999311/EzTao", + "avatar": "https://avatars.githubusercontent.com/u/11515291?v=4", + "description": "A Python Toolkit for AGN Time Series Analysis using CARMA models", "topics": [ - "uncertainty", - "numeric-integrals", - "noisy-data" + "carma", + "drw", + "agn", + "astronomy", + "time-series", + "gaussian-processes" ] }, { - "uid": "github/DingshanDeng/ysoisochrone", - "url": "https://github.com/DingshanDeng/ysoisochrone", - "rel": "/software/repository/github/DingshanDeng/ysoisochrone", - "avatar": "https://avatars.githubusercontent.com/u/88793427?v=4", - "description": "This is the Python package that handles the isochrones for young stellar objects (YSOs). One of the primary goals of this package is to derive the stellar mass and ages from the isochrones.", - "topics": [] - }, - { - "uid": "github/WilsonGregory/ginjax", - "url": "https://github.com/WilsonGregory/ginjax", - "rel": "/software/repository/github/WilsonGregory/ginjax", - "avatar": "https://avatars.githubusercontent.com/u/8941742?v=4", - "description": "Equivariant convolutions for machine learning on tensor fields", + "uid": "github/forrest-lab/scMatch", + "url": "https://github.com/forrest-lab/scMatch", + "rel": "/software/repository/github/forrest-lab/scMatch", + "avatar": "https://avatars.githubusercontent.com/u/12759531?v=4", + "description": "scMatch: a single-cell gene expression profile annotation tool using reference datasets", "topics": [] }, { - "uid": "github/mauropieroni/fastpta", - "url": "https://github.com/Mauropieroni/fastPTA", - "rel": "/software/repository/github/mauropieroni/fastpta", - "avatar": "https://avatars.githubusercontent.com/u/17546343?v=4", - "description": "A python code to forecast the sensitivity of future Pulsar Timing Array (PTA) configurations and assess the parameter estimation of Stochastic Gravitational Wave Background (SGWB)", + "uid": "github/abonaldi/TRECS", + "url": "https://github.com/abonaldi/TRECS", + "rel": "/software/repository/github/abonaldi/TRECS", + "avatar": "https://avatars.githubusercontent.com/u/29225487?v=4", + "description": "This repository contains the code used to produce the Tiered Radio Extragalactic Continuum Simulation (T-RECS, Bonaldi et al. 2018)", "topics": [] }, { - "uid": "github/brian-team/brian2", - "url": "https://github.com/brian-team/brian2", - "rel": "/software/repository/github/brian-team/brian2", - "avatar": "https://avatars.githubusercontent.com/u/2292949?v=4", - "description": "Brian is a free, open source simulator for spiking neural networks. ", - "topics": [ - "python", - "neuroscience", - "science", - "differential-equations", - "spiking-neural-networks", - "biological-simulations", - "code-generation", - "simulation-framework", - "brian", - "computational-neuroscience", - "brian2" - ] - }, - { - "uid": "github/BartoszBartmanski/StoSpa2", - "url": "https://github.com/BartoszBartmanski/StoSpa2", - "rel": "/software/repository/github/BartoszBartmanski/StoSpa2", - "avatar": "https://avatars2.githubusercontent.com/u/16625050?v=4", - "description": "A C++ software package for stochastic simulations of spatially extended systems", + "uid": "github/youngkaneda/DemeterWatch", + "url": "https://github.com/youngkaneda/DemeterWatch", + "rel": "/software/repository/github/youngkaneda/DemeterWatch", + "avatar": "https://avatars.githubusercontent.com/u/17750608?v=4", + "description": null, "topics": [] }, { - "uid": "github/macrocosme/time_domain_astronomy_sandbox", - "url": "https://github.com/macrocosme/time_domain_astronomy_sandbox", - "rel": "/software/repository/github/macrocosme/time_domain_astronomy_sandbox", - "avatar": "https://avatars.githubusercontent.com/u/569279?v=4", - "description": null, + "uid": "github/nhurleywalker/fits_warp", + "url": "https://github.com/nhurleywalker/fits_warp", + "rel": "/software/repository/github/nhurleywalker/fits_warp", + "avatar": "https://avatars.githubusercontent.com/u/8326966?v=4", + "description": "Warp catalogues and images to dedistort the effects of the ionosphere", "topics": [] }, { - "uid": "github/macrocosme/amber_meta", - "url": "https://github.com/macrocosme/amber_meta", - "rel": "/software/repository/github/macrocosme/amber_meta", - "avatar": "https://avatars.githubusercontent.com/u/569279?v=4", - "description": "Routines to launch amber in a meta manner", + "uid": "github/bids-apps/giga_connectome", + "url": "https://github.com/bids-apps/giga_connectome", + "rel": "/software/repository/github/bids-apps/giga_connectome", + "avatar": "https://avatars.githubusercontent.com/u/20709205?v=4", + "description": "generate connectome from fMRIPrep outputs", "topics": [] }, { - "uid": "github/cmbant/getdist", - "url": "https://github.com/cmbant/getdist", - "rel": "/software/repository/github/cmbant/getdist", - "avatar": "https://avatars.githubusercontent.com/u/3958819?v=4", - "description": "MCMC sample analysis, kernel densities, plotting, and GUI", + "uid": "github/STEllAR-GROUP/hpx", + "url": "https://github.com/STEllAR-GROUP/hpx", + "rel": "/software/repository/github/STEllAR-GROUP/hpx", + "avatar": "https://avatars1.githubusercontent.com/u/1780988?v=4", + "description": "The C++ Standard Library for Parallelism and Concurrency", "topics": [ - "kernel-density-estimation", - "plotting-in-python", - "mcmc", - "statistical-inference", - "contour-plot", - "sampling-methods" + "c-plus-plus", + "distributed", + "cross-platform", + "parallelism", + "concurrency", + "cpp" ] }, { - "uid": "github/egonw/bacting", - "url": "https://github.com/egonw/bacting", - "rel": "/software/repository/github/egonw/bacting", - "avatar": "https://avatars.githubusercontent.com/u/26721?v=4", - "description": "Bacting := acting as the Bioclipse TNG", + "uid": "github/STEllAR-GROUP/octotiger", + "url": "https://github.com/STEllAR-GROUP/octotiger", + "rel": "/software/repository/github/STEllAR-GROUP/octotiger", + "avatar": "https://avatars.githubusercontent.com/u/1780988?v=4", + "description": "Astrophysics program simulating the evolution of star systems based on the fast multipole method on adaptive Octrees", "topics": [ - "cheminformatics", - "bioinformatics", - "rdf", - "bioclipse", - "excel", - "blueobelisk" + "astrophysics", + "hpx", + "cuda-kernels", + "cuda", + "stellar-mergers" ] }, { - "uid": "github/johannes-titz/cofad", - "url": "https://github.com/johannes-titz/cofad", - "rel": "/software/repository/github/johannes-titz/cofad", - "avatar": "https://avatars.githubusercontent.com/u/32065313?v=4", - "description": null, + "uid": "github/DenaJGibbon/gibbonNetR", + "url": "https://github.com/DenaJGibbon/gibbonNetR", + "rel": "/software/repository/github/DenaJGibbon/gibbonNetR", + "avatar": "https://avatars.githubusercontent.com/u/26265144?v=4", + "description": "R package to use 'torch for R' for automated detection using convolutional neural nets in passive acoustic monitoring (PAM) data", "topics": [] }, { - "uid": "github/seawander/centerRadon", - "url": "https://github.com/seawander/centerRadon", - "rel": "/software/repository/github/seawander/centerRadon", - "avatar": "https://avatars.githubusercontent.com/u/10532909?v=4", - "description": "Center determination code based on Radon Transform", - "topics": [] + "uid": "github/institut-de-genomique/HAPO-G", + "url": "https://github.com/institut-de-genomique/HAPO-G", + "rel": "/software/repository/github/institut-de-genomique/HAPO-G", + "avatar": "https://avatars.githubusercontent.com/u/6636916?v=4", + "description": "Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.", + "topics": [ + "genomics", + "polishing", + "bioinformatics", + "genome" + ] }, { - "uid": "github/seawander/DebrisDiskFM", - "url": "https://github.com/seawander/DebrisDiskFM", - "rel": "/software/repository/github/seawander/DebrisDiskFM", - "avatar": "https://avatars.githubusercontent.com/u/10532909?v=4", - "description": "Debris Disk Forward Modeling", + "uid": "github/amkram/shusher", + "url": "https://github.com/amkram/shusher", + "rel": "/software/repository/github/amkram/shusher", + "avatar": "https://avatars.githubusercontent.com/u/6502785?v=4", + "description": "Private, browser-based placement of genome sequences on phylogenetic trees using UShER.", "topics": [] }, { - "uid": "github/JixingGE/GGCHEMPY", - "url": "https://github.com/JixingGE/GGCHEMPY", - "rel": "/software/repository/github/JixingGE/GGCHEMPY", - "avatar": "https://avatars.githubusercontent.com/u/49381977?v=4", - "description": "Gas-grain chemical code for interstellar medium in pure Python", + "uid": "github/rhyspoulton/OrbWeaver", + "url": "https://github.com/rhyspoulton/OrbWeaver", + "rel": "/software/repository/github/rhyspoulton/OrbWeaver", + "avatar": "https://avatars.githubusercontent.com/u/13027948?v=4", + "description": "Galaxy/(sub)halo orbital processing tool", "topics": [] }, { - "uid": "github/genostats/LowKi", - "url": "https://github.com/genostats/LowKi", - "rel": "/software/repository/github/genostats/LowKi", - "avatar": "https://avatars.githubusercontent.com/u/22770001?v=4", - "description": null, + "uid": "github/rhyspoulton/WhereWolf", + "url": "https://github.com/rhyspoulton/WhereWolf", + "rel": "/software/repository/github/rhyspoulton/WhereWolf", + "avatar": "https://avatars.githubusercontent.com/u/13027948?v=4", + "description": "Galaxy/(sub)Halo ghosting tool for N-body simulations", "topics": [] }, { - "uid": "github/kokkos/kokkos-fft", - "url": "https://github.com/kokkos/kokkos-fft", - "rel": "/software/repository/github/kokkos/kokkos-fft", - "avatar": "https://avatars.githubusercontent.com/u/10199860?v=4", - "description": "A shared-memory FFT for the Kokkos ecosystem", - "topics": [ - "fft", - "fft-library", - "kokkos" - ] - }, - { - "uid": "github/yair111/AnalyticLC", - "url": "https://github.com/yair111/AnalyticLC", - "rel": "/software/repository/github/yair111/AnalyticLC", - "avatar": "https://avatars.githubusercontent.com/u/93904333?v=4", - "description": null, + "uid": "github/tfwillems/HipSTR", + "url": "https://github.com/tfwillems/HipSTR", + "rel": "/software/repository/github/tfwillems/HipSTR", + "avatar": "https://avatars.githubusercontent.com/u/4562953?v=4", + "description": "Genotype and phase short tandem repeats using Illumina whole-genome sequencing data", "topics": [] }, { - "uid": "github/astro-informatics/harmonic", - "url": "https://github.com/astro-informatics/harmonic", - "rel": "/software/repository/github/astro-informatics/harmonic", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Machine learning assisted marginal likelihood (Bayesian evidence) estimation for Bayesian model selection", - "topics": [ - "bayesian-inference", - "machine-learning", - "statistics-toolbox", - "code" - ] - }, - { - "uid": "github/astro-informatics/s2fft", - "url": "https://github.com/astro-informatics/s2fft", - "rel": "/software/repository/github/astro-informatics/s2fft", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Differentiable and accelerated spherical transforms with JAX", - "topics": [ - "differentiable-programming", - "jax", - "spherical-harmonics", - "wigner-d-matrix", - "wigner-transform", - "fourier-transform", - "recursion-algorithm", - "pytorch" - ] - }, - { - "uid": "github/astro-informatics/DarkMappy", - "url": "https://github.com/astro-informatics/DarkMappy", - "rel": "/software/repository/github/astro-informatics/DarkMappy", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Scalable mapping of the dark universe", - "topics": [ - "dark-matter", - "bayesian", - "inverse-problems", - "signal-processing", - "harmonic-analysis" - ] + "uid": "github/david-bogdan-r/ARTEMIS", + "url": "https://github.com/david-bogdan-r/ARTEMIS", + "rel": "/software/repository/github/david-bogdan-r/ARTEMIS", + "avatar": "https://avatars.githubusercontent.com/u/89922494?v=4", + "description": null, + "topics": [] }, { - "uid": "github/astro-informatics/flaglet-archive", - "url": "https://github.com/astro-informatics/flaglet-archive", - "rel": "/software/repository/github/astro-informatics/flaglet-archive", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Fast and exact wavelet transform on the ball", + "uid": "github/schulze61/RhoPop", + "url": "https://github.com/schulze61/RhoPop", + "rel": "/software/repository/github/schulze61/RhoPop", + "avatar": "https://avatars.githubusercontent.com/u/43186618?v=4", + "description": null, "topics": [] }, { - "uid": "github/astro-informatics/massmappy", - "url": "https://github.com/astro-informatics/massmappy", - "rel": "/software/repository/github/astro-informatics/massmappy", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Mapping dark matter on the celestial sphere", + "uid": "github/idefix-code/idefix", + "url": "https://github.com/idefix-code/idefix", + "rel": "/software/repository/github/idefix-code/idefix", + "avatar": "https://avatars.githubusercontent.com/u/123293720?v=4", + "description": "Idefix source code for astrophysical fluid dynamics", "topics": [] }, { - "uid": "github/astro-informatics/flag-archive", - "url": "https://github.com/astro-informatics/flag-archive", - "rel": "/software/repository/github/astro-informatics/flag-archive", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Fast Fourier-Laguerre transform on the ball and exact spherical Bessel and Fourier-Bessel transforms", + "uid": "github/mawenlong2016/DeepAnnotation", + "url": "https://github.com/mawenlong2016/DeepAnnotation", + "rel": "/software/repository/github/mawenlong2016/DeepAnnotation", + "avatar": "https://avatars.githubusercontent.com/u/38175438?v=4", + "description": "a novel interpretable DL-based genomic prediction model that integrates comprehensive species- and tissue-level transcriptional regulatory functional annotations to predict phenotypes", "topics": [] }, { - "uid": "github/astro-informatics/sleplet", - "url": "https://github.com/astro-informatics/sleplet", - "rel": "/software/repository/github/astro-informatics/sleplet", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Slepian Scale-Discretised Wavelets", + "uid": "github/galsci/pysm", + "url": "https://github.com/galsci/pysm", + "rel": "/software/repository/github/galsci/pysm", + "avatar": "https://avatars.githubusercontent.com/u/81497054?v=4", + "description": "PySM 3: Sky emission simulations for Cosmic Microwave Background experiments", "topics": [ - "manifolds", + "cosmology", + "cosmic-microwave-background", + "healpix", + "healpy", "python", - "slepian-functions", - "sphere", - "wavelets" + "mpi" ] }, { - "uid": "github/astro-informatics/RequiSim", - "url": "https://github.com/astro-informatics/RequiSim", - "rel": "/software/repository/github/astro-informatics/RequiSim", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": null, - "topics": [] + "uid": "github/leishenggit/CircleBase", + "url": "https://github.com/leishenggit/CircleBase", + "rel": "/software/repository/github/leishenggit/CircleBase", + "avatar": "https://avatars.githubusercontent.com/u/11373459?v=4", + "description": "An integrated resource and analysis platform for human eccDNAs", + "topics": [ + "eccdna", + "function-regulation", + "pagerank" + ] }, { - "uid": "github/astro-informatics/s2", - "url": "https://github.com/astro-informatics/s2", - "rel": "/software/repository/github/astro-informatics/s2", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Functions on the sphere", + "uid": "github/tool-bin/ukbcc", + "url": "https://github.com/tool-bin/ukbcc", + "rel": "/software/repository/github/tool-bin/ukbcc", + "avatar": "https://avatars.githubusercontent.com/u/67130159?v=4", + "description": "UKBB Cohort Curator. ", "topics": [] }, { - "uid": "github/astro-informatics/QuantifAI", - "url": "https://github.com/astro-informatics/QuantifAI", - "rel": "/software/repository/github/astro-informatics/QuantifAI", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "PyTorch-based RI imaging reconstruction package with scalable Bayesian uncertainty quantification relying on data-driven (learned) priors", + "uid": "github/Quantum-Dynamics-Hub/libra-code", + "url": "https://github.com/Quantum-Dynamics-Hub/libra-code", + "rel": "/software/repository/github/Quantum-Dynamics-Hub/libra-code", + "avatar": "https://avatars.githubusercontent.com/u/27871906?v=4", + "description": null, "topics": [ - "machine-learning", - "radio-interferometry", - "uncertainty-quantification", - "high-dimensional-data", - "pytorch" + "nonadiabatic", + "quantum", + "quantum-chemistry", + "dynamics", + "molecular-dynamics", + "do-it-yourself", + "library", + "methodology-development", + "electronic-structure", + "semiempirical-methods", + "atomic-orbitals", + "object-oriented", + "utilities" ] }, { - "uid": "github/astro-informatics/ssht", - "url": "https://github.com/astro-informatics/ssht", - "rel": "/software/repository/github/astro-informatics/ssht", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Fast and exact spin spherical harmonic transforms", + "uid": "github/InfOmics/PanDelos-frags", + "url": "https://github.com/InfOmics/PanDelos-frags", + "rel": "/software/repository/github/InfOmics/PanDelos-frags", + "avatar": "https://avatars.githubusercontent.com/u/37143442?v=4", + "description": "A version of PanDelos that discovers pangenomic content in fragmented genomes", "topics": [] }, { - "uid": "github/astro-informatics/s2let", - "url": "https://github.com/astro-informatics/s2let", - "rel": "/software/repository/github/astro-informatics/s2let", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Fast wavelet transforms on the sphere.", + "uid": "github/Genentech/SPEX", + "url": "https://github.com/Genentech/spex", + "rel": "/software/repository/github/Genentech/SPEX", + "avatar": "https://avatars.githubusercontent.com/u/3913764?v=4", + "description": null, "topics": [] }, { - "uid": "github/astro-informatics/stringgen", - "url": "https://github.com/astro-informatics/stringgen", - "rel": "/software/repository/github/astro-informatics/stringgen", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Scattering based cosmic string emulation", + "uid": "github/max0x7ba/atomic_queue", + "url": "https://github.com/max0x7ba/atomic_queue", + "rel": "/software/repository/github/max0x7ba/atomic_queue", + "avatar": "https://avatars.githubusercontent.com/u/765202?v=4", + "description": "C++ lockless queue.", "topics": [ - "cosmic-strings", - "cosmology", - "emulation", - "scattering-transform", - "statistics", - "wavelet-transform" + "lock-free", + "lockfree", + "atomics", + "cplusplus", + "atomic", + "queue", + "multithreading", + "multi-threading", + "cpp", + "data-structures", + "datastructures", + "atomic-queues", + "ring-buffer-array", + "lockless", + "c-plus-plus", + "c-plusplus", + "circular-queue", + "benchmarks", + "low-latency", + "high-performance" ] }, { - "uid": "github/astro-informatics/comb", - "url": "https://github.com/astro-informatics/comb", - "rel": "/software/repository/github/astro-informatics/comb", - "avatar": "https://avatars.githubusercontent.com/u/10872187?v=4", - "description": "Compact object simulations on the sphere", - "topics": [] + "uid": "github/AndrewAnnex/SpiceyPy", + "url": "https://github.com/AndrewAnnex/SpiceyPy", + "rel": "/software/repository/github/AndrewAnnex/SpiceyPy", + "avatar": "https://avatars.githubusercontent.com/u/2126916?v=4", + "description": "SpiceyPy: a Pythonic Wrapper for the SPICE Toolkit.", + "topics": [ + "python", + "nasa", + "toolkit", + "spice", + "space", + "ephemeris", + "navigation", + "hacktoberfest" + ] }, { - "uid": "github/dkoslicki/TAMPA", - "url": "https://github.com/dkoslicki/TAMPA", - "rel": "/software/repository/github/dkoslicki/TAMPA", - "avatar": "https://avatars.githubusercontent.com/u/6362936?v=4", - "description": "A collection of tools to visualize CAMI profiling outputs", - "topics": [] + "uid": "github/tsipkens/atems", + "url": "https://github.com/tsipkens/atems", + "rel": "/software/repository/github/tsipkens/atems", + "avatar": "https://avatars.githubusercontent.com/u/25955212?v=4", + "description": "A MATLAB codebase to analyze TEM images of soot, which includes new methods associated with this project and a compilation of other pre-existing methods into a single package.", + "topics": [ + "soot", + "aggregates", + "transmission-electron-microscopy", + "particle-size-distribution", + "tem", + "tem-images", + "particle-diameter", + "aerosols", + "image-processing" + ] }, { - "uid": "github/ahoward-cf/ppmap", - "url": "https://github.com/ahoward-cf/ppmap", - "rel": "/software/repository/github/ahoward-cf/ppmap", - "avatar": "https://avatars.githubusercontent.com/u/29404906?v=4", - "description": "Code for column density mapping with extra dimensions (temperature and dust opacity index).", - "topics": [] + "uid": "github/mscaudill/openseize", + "url": "https://github.com/mscaudill/openseize", + "rel": "/software/repository/github/mscaudill/openseize", + "avatar": "https://avatars.githubusercontent.com/u/12617099?v=4", + "description": "Digital Signal Processing for Big EEGs", + "topics": [ + "big-data", + "eeg", + "seizure", + "signal-processing" + ] }, { - "uid": "github/CoLRev-Environment/bib-dedupe", - "url": "https://github.com/CoLRev-Environment/bib-dedupe", - "rel": "/software/repository/github/CoLRev-Environment/bib-dedupe", - "avatar": "https://avatars.githubusercontent.com/u/101105237?v=4", - "description": null, + "uid": "github/NickSwainston/pulsar_spectra", + "url": "https://github.com/NickSwainston/pulsar_spectra", + "rel": "/software/repository/github/NickSwainston/pulsar_spectra", + "avatar": "https://avatars.githubusercontent.com/u/18390846?v=4", + "description": "A simple interface to record pulsar's flux density measurements for a large number of papers and perform fitting of spectral models.", "topics": [] }, { - "uid": "github/hjozwiak-umk/bigos_h2he", - "url": "https://github.com/hjozwiak-umk/bigos_h2he", - "rel": "/software/repository/github/hjozwiak-umk/bigos_h2he", - "avatar": "https://avatars.githubusercontent.com/u/70630776?v=4", - "description": "the SCATTERING code from the BIGOS package adjusted for diatom-atom calculations", + "uid": "github/GreycLab/gmic", + "url": "https://github.com/GreycLab/gmic", + "rel": "/software/repository/github/GreycLab/gmic", + "avatar": "https://avatars.githubusercontent.com/u/110657271?v=4", + "description": "GREYC's Magic for Image Computing: A Full-Featured Open-Source Framework for Image Processing", "topics": [] }, { - "uid": "github/Peter-Hogg/SLAP2_Utils", - "url": "https://github.com/Peter-Hogg/SLAP2_Utils", - "rel": "/software/repository/github/Peter-Hogg/SLAP2_Utils", - "avatar": "https://avatars.githubusercontent.com/u/39841502?v=4", - "description": "SLAP2 Helper Functions", - "topics": [] + "uid": "github/MonashSmartStructures/ospgrillage", + "url": "https://github.com/MonashSmartStructures/ospgrillage", + "rel": "/software/repository/github/MonashSmartStructures/ospgrillage", + "avatar": "https://avatars.githubusercontent.com/u/53598771?v=4", + "description": "`ospgrillage` is a package that wraps `OpenSeesPy` with an interface dedicated to the development and analysis of regular bridge deck grillage models.", + "topics": [ + "bridge-engineering", + "structural-analysis", + "finite-element-analysis", + "bridges", + "structural-engineering" + ] }, { - "uid": "github/sievers/corrcal", - "url": "https://github.com/sievers/corrcal", - "rel": "/software/repository/github/sievers/corrcal", - "avatar": "https://avatars.githubusercontent.com/u/338830?v=4", - "description": "Calibration Code for Semi-Redundant arrays", - "topics": [] + "uid": "github/joboog/r2ogs6", + "url": "https://github.com/joboog/r2ogs6", + "rel": "/software/repository/github/joboog/r2ogs6", + "avatar": "https://avatars.githubusercontent.com/u/24472234?v=4", + "description": "R-API to the multiphysics simulator OpenGeoSys 6. THIS IS A MIRROR OF: https://gitlab.opengeosys.org/ogs/tools/r2ogs6", + "topics": [ + "geoscience", + "hydrogeology", + "hydrology", + "multi-physics", + "opengeosys", + "porous-media-flow", + "r", + "transport-modelling" + ] }, { - "uid": "github/timstaley/voevent-parse", - "url": "https://github.com/timstaley/voevent-parse", - "rel": "/software/repository/github/timstaley/voevent-parse", - "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", - "description": "VOEvent parsing and manipulation routines built on lxml.objectify.", + "uid": "github/GiMattia/PyPLUTO", + "url": "https://github.com/GiMattia/PyPLUTO", + "rel": "/software/repository/github/GiMattia/PyPLUTO", + "avatar": "https://avatars.githubusercontent.com/u/95360639?v=4", + "description": "A data analysis Python package for the PLUTO code", "topics": [ "python", - "astronomy", - "xml-parsing", - "voevent" + "visualization" ] }, { - "uid": "github/timstaley/chimenea", - "url": "https://github.com/timstaley/chimenea", - "rel": "/software/repository/github/timstaley/chimenea", - "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", - "description": "Automated image-synthesis of multi-epoch radio-telescope data.", + "uid": "github/FengTaoSMU/MOBFinder", + "url": "https://github.com/FengTaoSMU/MOBFinder", + "rel": "/software/repository/github/FengTaoSMU/MOBFinder", + "avatar": "https://avatars.githubusercontent.com/u/104297870?v=4", + "description": "MOB typing for plasmid metagenomic fragments", "topics": [] }, { - "uid": "github/timstaley/amisurvey", - "url": "https://github.com/timstaley/amisurvey", - "rel": "/software/repository/github/timstaley/amisurvey", - "avatar": "https://avatars.githubusercontent.com/u/1352905?v=4", - "description": "End-to-end calibration and imaging of AMI-LA data.", + "uid": "github/jmackereth/orbit-estimation", + "url": "https://github.com/jmackereth/orbit-estimation", + "rel": "/software/repository/github/jmackereth/orbit-estimation", + "avatar": "https://avatars.githubusercontent.com/u/10188688?v=4", + "description": "calculating fast orbital parameters using the St\u00e4ckel approximation", "topics": [] }, { - "uid": "github/liulab-dfci/TRUST4", - "url": "https://github.com/liulab-dfci/TRUST4", - "rel": "/software/repository/github/liulab-dfci/TRUST4", - "avatar": "https://avatars.githubusercontent.com/u/52803964?v=4", - "description": "TCR and BCR assembly from RNA-seq data", + "uid": "github/fhtouma/subgen2", + "url": "https://github.com/fhtouma/subgen2", + "rel": "/software/repository/github/fhtouma/subgen2", + "avatar": "https://avatars.githubusercontent.com/u/142860589?v=4", + "description": null, "topics": [] }, { - "uid": "github/cran/irtplay", - "url": "https://github.com/cran/irtplay", - "rel": "/software/repository/github/cran/irtplay", - "avatar": "https://avatars.githubusercontent.com/u/6899542?v=4", - "description": ":exclamation:\u00a0This\u00a0is\u00a0a\u00a0read-only\u00a0mirror\u00a0of\u00a0the\u00a0CRAN\u00a0R\u00a0package\u00a0repository. irtplay\u00a0\u2014\u00a0Unidimensional\u00a0Item\u00a0Response\u00a0Theory\u00a0Modeling.\u00a0Homepage:\u00a0https://github.com/hwangQ/irtplay Report\u00a0bugs\u00a0for\u00a0this\u00a0package:\u00a0https://github.com/hwangQ/irtplay/issues", + "uid": "github/ssadedin/bazam", + "url": "https://github.com/ssadedin/bazam", + "rel": "/software/repository/github/ssadedin/bazam", + "avatar": "https://avatars.githubusercontent.com/u/138868?v=4", + "description": "A read extraction and realignment tool for next generation sequencing data", "topics": [] }, { - "uid": "github/ComputationalBiomechanicsLab/opensim-creator", - "url": "https://github.com/ComputationalBiomechanicsLab/opensim-creator", - "rel": "/software/repository/github/ComputationalBiomechanicsLab/opensim-creator", - "avatar": "https://avatars.githubusercontent.com/u/65425720?v=4", - "description": "A UI for building OpenSim models", - "topics": [ - "biomechanics", - "opensim", - "physics-simulation" - ] + "uid": "github/Jurgenvilla/moons-sim", + "url": "https://github.com/Jurgenvilla/moons-sim", + "rel": "/software/repository/github/Jurgenvilla/moons-sim", + "avatar": "https://avatars.githubusercontent.com/u/2405448?v=4", + "description": "1D Spectral Simulator for VLT-MOONS", + "topics": [] }, { - "uid": "github/mlaparie/sigh", - "url": "https://github.com/mlaparie/sigh", - "rel": "/software/repository/github/mlaparie/sigh", - "avatar": "https://avatars.githubusercontent.com/u/80409402?v=4", - "description": "sigh, a program to cure optimism and automatically scrape worldwide data about reported disaster and perturbation events.", + "uid": "github/MichelleLochner/astronomaly", + "url": "https://github.com/MichelleLochner/astronomaly", + "rel": "/software/repository/github/MichelleLochner/astronomaly", + "avatar": "https://avatars.githubusercontent.com/u/6876163?v=4", + "description": "A flexible framework for anomaly detection in astronomy.", "topics": [] }, { - "uid": "github/mlaparie/phidget-tools", - "url": "https://github.com/mlaparie/phidget-tools", - "rel": "/software/repository/github/mlaparie/phidget-tools", - "avatar": "https://avatars.githubusercontent.com/u/80409402?v=4", - "description": "Terminal tools to record/monitor from Phidget 1048_1B USB-thermocouple devices", - "topics": [ - "data", - "data-visualization", - "data-visualisation", - "thermocouple", - "temperature", - "temperature-sensor", - "temperature-monitoring", - "phidgets", - "phidget", - "tui", - "cli", - "terminal-based", - "terminal-app", - "terminal", - "command-line", - "command-line-tool", - "commandline" - ] + "uid": "github/TabeaSonnenschein/UrbHealth-ABM", + "url": "https://github.com/TabeaSonnenschein/UrbHealth-ABM", + "rel": "/software/repository/github/TabeaSonnenschein/UrbHealth-ABM", + "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", + "description": null, + "topics": [] }, { - "uid": "github/adamantine-sim/adamantine", - "url": "https://github.com/adamantine-sim/adamantine", - "rel": "/software/repository/github/adamantine-sim/adamantine", - "avatar": "https://avatars.githubusercontent.com/u/82662955?v=4", - "description": "Software to simulate heat transfer for additive manufacturing", - "topics": [ - "3d-printing", - "heat-transfer", - "simulation" - ] + "uid": "github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", + "url": "https://github.com/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", + "rel": "/software/repository/github/TabeaSonnenschein/Spatial-Agent-based-Modeling-of-Urban-Health-Interventions", + "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", + "description": "This repository contains the codes required for building a spatial agent based model of urban health interventions.", + "topics": [] }, { - "uid": "github/amkozlov/raxml-ng", - "url": "https://github.com/amkozlov/raxml-ng", - "rel": "/software/repository/github/amkozlov/raxml-ng", - "avatar": "https://avatars.githubusercontent.com/u/5624530?v=4", - "description": "RAxML Next Generation: faster, easier-to-use and more flexible", - "topics": [ - "bioinformatics", - "phylogenetics", - "maximum-likelihood", - "mpi", - "pthreads" - ] + "uid": "github/TabeaSonnenschein/GenSynthPop", + "url": "https://github.com/TabeaSonnenschein/GenSynthPop", + "rel": "/software/repository/github/TabeaSonnenschein/GenSynthPop", + "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", + "description": "This package contains a set of functions that help create a spatially explicit synthetic population based on spatial marginal datasets and the stratified datasets, as most census provide.", + "topics": [] }, { - "uid": "github/Eventdisplay/Eventdisplay", - "url": "https://github.com/Eventdisplay/Eventdisplay", - "rel": "/software/repository/github/Eventdisplay/Eventdisplay", - "avatar": "https://avatars.githubusercontent.com/u/50499294?v=4", - "description": "A reconstruction and analysis pipeline for ground-based imaging atmospheric Cherenkov Telescopes", + "uid": "github/TabeaSonnenschein/CellAutDisp", + "url": "https://github.com/TabeaSonnenschein/CellAutDisp", + "rel": "/software/repository/github/TabeaSonnenschein/CellAutDisp", + "avatar": "https://avatars.githubusercontent.com/u/62036067?v=4", + "description": null, "topics": [] }, { - "uid": "github/CosmoStatGW/MGCosmoPop", - "url": "https://github.com/CosmoStatGW/MGCosmoPop", - "rel": "/software/repository/github/CosmoStatGW/MGCosmoPop", - "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", - "description": "Modified Gravity and Cosmology with Binary Black Holes' Population models : hierarchical bayesian method for constraining modified GW propagation and BBH population models with GWs.", + "uid": "github/CGAL/cgal", + "url": "https://github.com/CGAL/cgal", + "rel": "/software/repository/github/CGAL/cgal", + "avatar": "https://avatars0.githubusercontent.com/u/5746664?v=4", + "description": "The public CGAL repository, see the README below", "topics": [ - "gravitational-waves", - "hierarchical-bayesian-analysis", - "cosmology" + "cgal", + "c-plus-plus", + "geometry", + "algorithms", + "library", + "cpp", + "template-library", + "geometry-processing", + "computational-geometry", + "triangulation", + "mesh-processing", + "arrange", + "point-cloud", + "boolean-operations", + "polygon", + "meshes", + "voronoi-diagram" ] }, { - "uid": "github/CosmoStatGW/DarkSirensStat", - "url": "https://github.com/CosmoStatGW/DarkSirensStat", - "rel": "/software/repository/github/CosmoStatGW/DarkSirensStat", - "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", - "description": "Statistical method for measuring modified GW propagation and Hubble parameter with dark sirens and galaxy catalogues", + "uid": "github/starkit/wsynphot", + "url": "https://github.com/starkit/wsynphot", + "rel": "/software/repository/github/starkit/wsynphot", + "avatar": "https://avatars.githubusercontent.com/u/34584369?v=4", + "description": "Synthetic Photometry package using Quantities", "topics": [] }, { - "uid": "github/CosmoStatGW/gwfast", - "url": "https://github.com/CosmoStatGW/gwfast", - "rel": "/software/repository/github/CosmoStatGW/gwfast", - "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", - "description": "A Fisher information matrix python package for GW detector networks.", + "uid": "github/IPK-BIT/divbrowse", + "url": "https://github.com/IPK-BIT/divbrowse", + "rel": "/software/repository/github/IPK-BIT/divbrowse", + "avatar": "https://avatars.githubusercontent.com/u/60338646?v=4", + "description": "A web application for interactive exploration and analysis of very large SNP matrices", + "topics": [] + }, + { + "uid": "github/javicarron/pynkowski", + "url": "https://github.com/javicarron/pynkowski", + "rel": "/software/repository/github/javicarron/pynkowski", + "avatar": "https://avatars.githubusercontent.com/u/25009611?v=4", + "description": "Pynkowski is a Python package to compute Minkowski Functionals, as well as their expected values for different fields.", "topics": [ - "automatic-differentiation", - "fisher-information", - "gravitational-waves", - "jax", + "cmb", + "gaussian", + "healpix", + "healpy", + "minkowski", + "non-gaussian", + "polarization", + "spherical", + "topology", + "cosmology", + "maps", + "curvature", + "anisotropy", + "minkowski-functionals", + "non-gaussianities", "python" ] }, { - "uid": "github/CosmoStatGW/WF4Py", - "url": "https://github.com/CosmoStatGW/WF4Py", - "rel": "/software/repository/github/CosmoStatGW/WF4Py", - "avatar": "https://avatars.githubusercontent.com/u/78158898?v=4", - "description": "Gravitational waves waveform models in pure Python language", - "topics": [ - "gravitational-waves", - "waveforms" - ] - }, - { - "uid": "github/yungkipreos/Min-CaLM", - "url": "https://github.com/yungkipreos/Min-CaLM", - "rel": "/software/repository/github/yungkipreos/Min-CaLM", - "avatar": "https://avatars.githubusercontent.com/u/47731788?v=4", - "description": "This python package can perform automated mineral compositional analysis on debris disk spectra. It will determine which minerals are present and what their relative abundances are within the debris disk. This code is used in a paper that has been submitted to the American Journal of Undergraduate Research (AJUR), titled \"An Unbiased Mineral Compositional Analysis Technique for Debris Disks\" by Yung Kipreos and Dr. Inseok Song..", - "topics": [] - }, - { - "uid": "github/fccoelho/epigrass", - "url": "https://github.com/fccoelho/epigrass", - "rel": "/software/repository/github/fccoelho/epigrass", - "avatar": "https://avatars.githubusercontent.com/u/140123?v=4", - "description": "Epidemiological Geo-referenced Analysis and Simulation system", + "uid": "github/javicarron/mtneedlet", + "url": "https://github.com/javicarron/mtneedlet", + "rel": "/software/repository/github/javicarron/mtneedlet", + "avatar": "https://avatars.githubusercontent.com/u/25009611?v=4", + "description": "This is a Python Package aimed at the use of needlets to filter spherical maps, detecting the maxima within the maps and analysing them using a multiple testing approach.", "topics": [] }, { - "uid": "github/fccoelho/epimodels", - "url": "https://github.com/fccoelho/epimodels", - "rel": "/software/repository/github/fccoelho/epimodels", - "avatar": "https://avatars.githubusercontent.com/u/140123?v=4", - "description": "Library for simulation with mathematical epidemiology models", + "uid": "github/qqpigass/FREEPII", + "url": "https://github.com/qqpigass/FREEPII", + "rel": "/software/repository/github/qqpigass/FREEPII", + "avatar": "https://avatars.githubusercontent.com/u/68411347?v=4", + "description": "Source code for FREEPII", "topics": [] }, { - "uid": "github/CollinErickson/GauPro", - "url": "https://github.com/CollinErickson/GauPro", - "rel": "/software/repository/github/CollinErickson/GauPro", - "avatar": "https://avatars.githubusercontent.com/u/2402685?v=4", - "description": "R package for Gaussian process modeling", + "uid": "github/sbailey/empca", + "url": "https://github.com/sbailey/empca", + "rel": "/software/repository/github/sbailey/empca", + "avatar": "https://avatars.githubusercontent.com/u/218471?v=4", + "description": "Principal Component Analysis (PCA) for Missing and/or Noisy Data", "topics": [] }, { - "uid": "github/samirmartins/pydaq", - "url": "https://github.com/samirmartins/pydaq", - "rel": "/software/repository/github/samirmartins/pydaq", - "avatar": "https://avatars.githubusercontent.com/u/33382485?v=4", - "description": "Data Acquisition and Experimental Analysis with Python and Graphical User Interface", + "uid": "github/unfoldtoolbox/UnfoldSim.jl", + "url": "https://github.com/unfoldtoolbox/UnfoldSim.jl", + "rel": "/software/repository/github/unfoldtoolbox/UnfoldSim.jl", + "avatar": "https://avatars.githubusercontent.com/u/35995464?v=4", + "description": "Simulate EEG / ERP data with overlap, non-linear effects, multiple regression", "topics": [ - "national-instruments", - "nidaq", - "nidaqmx", - "pysimplegui", - "python", - "step-response", - "arduino", - "arduino-library", - "graphical-user-interface", - "real-datasets" + "eeg", + "erp", + "julia", + "simulation", + "time-series" ] }, { - "uid": "github/nombac/optab", - "url": "https://github.com/nombac/optab", - "rel": "/software/repository/github/nombac/optab", - "avatar": "https://avatars.githubusercontent.com/u/38897846?v=4", - "description": "Public Fortran90 code package for generating ideal-gas opacity tables", - "topics": [] - }, - { - "uid": "github/cuDisc/cuDisc", - "url": "https://github.com/cuDisc/cuDisc", - "rel": "/software/repository/github/cuDisc/cuDisc", - "avatar": "https://avatars.githubusercontent.com/u/158287095?v=4", - "description": "A CUDA-accelerated 2D code for protoplanetary disc evolution simulations", + "uid": "github/JIBSIL/DistriFS", + "url": "https://github.com/JIBSIL/DistriFS", + "rel": "/software/repository/github/JIBSIL/DistriFS", + "avatar": "https://avatars.githubusercontent.com/u/40243545?v=4", + "description": "Distributed, efficient and secure filesystem coded in Go", "topics": [] }, { - "uid": "github/tbep-tech/tbeptools", - "url": "https://github.com/tbep-tech/tbeptools", - "rel": "/software/repository/github/tbep-tech/tbeptools", - "avatar": "https://avatars.githubusercontent.com/u/49565964?v=4", - "description": "R package for Tampa Bay Estuary Program functions", + "uid": "github/manzt/anywidget", + "url": "https://github.com/manzt/anywidget", + "rel": "/software/repository/github/manzt/anywidget", + "avatar": "https://avatars.githubusercontent.com/u/24403730?v=4", + "description": "reusable widgets made easy", "topics": [ - "package", - "data-analysis", - "water-quality", - "tbep", - "tampa-bay" + "jupyter", + "python", + "widgets" ] }, { - "uid": "github/deaglanbartlett/symbolic_pofk", - "url": "https://github.com/DeaglanBartlett/symbolic_pofk", - "rel": "/software/repository/github/deaglanbartlett/symbolic_pofk", - "avatar": "https://avatars.githubusercontent.com/u/47668431?v=4", - "description": "Precise symbolic emulators of the linear and nonlinear matter power spectrum", + "uid": "github/BGPS/distance-omnibus", + "url": "https://github.com/BGPS/distance-omnibus", + "rel": "/software/repository/github/BGPS/distance-omnibus", + "avatar": "https://avatars.githubusercontent.com/u/3277857?v=4", + "description": "Distance estimation method for molecular cloud clumps in the Milky Way", "topics": [] }, { - "uid": "github/xiaofengsong/pHisPred", - "url": "https://github.com/xiaofengsong/pHisPred", - "rel": "/software/repository/github/xiaofengsong/pHisPred", - "avatar": "https://avatars.githubusercontent.com/u/13796294?v=4", - "description": "A bioinformatic tool for identifying protein histidine phosphorylation sites", + "uid": "github/dshawul/NebulaSEM", + "url": "https://github.com/dshawul/NebulaSEM", + "rel": "/software/repository/github/dshawul/NebulaSEM", + "avatar": "https://avatars.githubusercontent.com/u/213842?v=4", + "description": "Finite Volume (FV) and high-order Discontinuous Galerkin (DG) solver", "topics": [] }, { - "uid": "github/gmbrandt/HTOF", - "url": "https://github.com/gmbrandt/HTOF", - "rel": "/software/repository/github/gmbrandt/HTOF", - "avatar": "https://avatars.githubusercontent.com/u/38594712?v=4", - "description": "HTOF: Code which parses the intermediate data from Hipparcos and Gaia and fits astrometric solutions to those data. Capable of computing likelyhoods and parameter errors in line with the catalog.", + "uid": "github/datngu/Circall", + "url": "https://github.com/datngu/Circall", + "rel": "/software/repository/github/datngu/Circall", + "avatar": "https://avatars.githubusercontent.com/u/59732388?v=4", + "description": "Circall is a novel method to discover circular RNA from paired-end RNA sequencing data", "topics": [] }, { - "uid": "github/gmbrandt/xwavecal", - "url": "https://github.com/gmbrandt/xwavecal", - "rel": "/software/repository/github/gmbrandt/xwavecal", - "avatar": "https://avatars.githubusercontent.com/u/38594712?v=4", - "description": "A library of routines for wavelength calibrating echelle spectrographs for high precision radial velocity work. A limited data-reduction pipeline is included.", + "uid": "github/Jesper-Karsten/MBASC", + "url": "https://github.com/Jesper-Karsten/MBASC", + "rel": "/software/repository/github/Jesper-Karsten/MBASC", + "avatar": "https://avatars.githubusercontent.com/u/132052164?v=4", + "description": null, "topics": [] }, { - "uid": "github/hyperopt/hyperopt", - "url": "https://github.com/hyperopt/hyperopt", - "rel": "/software/repository/github/hyperopt/hyperopt", - "avatar": "https://avatars.githubusercontent.com/u/5280805?v=4", - "description": "Distributed Asynchronous Hyperparameter Optimization in Python", + "uid": "github/jgagneastro/CoMover", + "url": "https://github.com/jgagneastro/CoMover", + "rel": "/software/repository/github/jgagneastro/CoMover", + "avatar": "https://avatars.githubusercontent.com/u/10508801?v=4", + "description": null, "topics": [] }, { - "uid": "github/ckarako/RRATtrap", - "url": "https://github.com/ckarako/RRATtrap", - "rel": "/software/repository/github/ckarako/RRATtrap", - "avatar": "https://avatars.githubusercontent.com/u/12614480?v=4", - "description": "A single-pulse sifting algorithm to identify RRATs and transients using output from Scott Ransom's PRESTO single_pulse_search.py . Code described and applied in Karako-Argaman et al. 2015: http://adsabs.harvard.edu/abs/2015ApJ...809...67K", + "uid": "github/flaminiafortuni/FORECAST", + "url": "https://github.com/flaminiafortuni/FORECAST", + "rel": "/software/repository/github/flaminiafortuni/FORECAST", + "avatar": "https://avatars.githubusercontent.com/u/55835937?v=4", + "description": null, "topics": [] }, { - "uid": "github/planck-npipe/hillipop", - "url": "https://github.com/planck-npipe/hillipop", - "rel": "/software/repository/github/planck-npipe/hillipop", - "avatar": "https://avatars.githubusercontent.com/u/75025933?v=4", - "description": "A cobaya high-ell likelihood polarized for planck 2020 data (NPIPE release)", + "uid": "github/online-ml/deep-river", + "url": "https://github.com/online-ml/deep-river", + "rel": "/software/repository/github/online-ml/deep-river", + "avatar": "https://avatars.githubusercontent.com/u/47002673?v=4", + "description": null, "topics": [ - "cmb", - "likelihood", - "cobaya", - "planck" + "data-science", + "deep-learning", + "incremental-learning", + "machine-learning", + "neural-network", + "online-deep-learning", + "online-learning", + "outlier-detection", + "pytorch", + "stream" ] }, { - "uid": "github/planck-npipe/lollipop", - "url": "https://github.com/planck-npipe/lollipop", - "rel": "/software/repository/github/planck-npipe/lollipop", - "avatar": "https://avatars.githubusercontent.com/u/75025933?v=4", - "description": "A cobaya low-ell likelihood polarized for planck 2020 data (NPIPE release)", + "uid": "github/rmjarvis/Piff", + "url": "https://github.com/rmjarvis/Piff", + "rel": "/software/repository/github/rmjarvis/Piff", + "avatar": "https://avatars.githubusercontent.com/u/623887?v=4", + "description": "PSFs In the Full FOV. A software package for modeling the point-spread function (PSF) across the full field of view (FOV). Documentation:", "topics": [ - "cmb", - "likelihood", - "cobaya", - "planck" + "astronomy", + "psf", + "des", + "lsst", + "weaklensing" ] }, { - "uid": "github/jonescompneurolab/hnn-core", - "url": "https://github.com/jonescompneurolab/hnn-core", - "rel": "/software/repository/github/jonescompneurolab/hnn-core", - "avatar": "https://avatars.githubusercontent.com/u/37816136?v=4", - "description": "Simulation and optimization of neural circuits for MEG/EEG source estimates", + "uid": "github/rmjarvis/TreeCorr", + "url": "https://github.com/rmjarvis/TreeCorr", + "rel": "/software/repository/github/rmjarvis/TreeCorr", + "avatar": "https://avatars.githubusercontent.com/u/623887?v=4", + "description": "Code for efficiently computing 2-point and 3-point correlation functions. For documentation, go to", "topics": [ - "neuron-simulator", - "eeg", - "meg", - "computational-modeling" + "astronomy", + "python", + "des", + "lsst", + "correlation", + "weaklensing", + "largescalestructure" ] }, { - "uid": "github/JohannesBuchner/BXA", - "url": "https://github.com/JohannesBuchner/BXA", - "rel": "/software/repository/github/JohannesBuchner/BXA", - "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", - "description": "Bayesian X-ray analysis (nested sampling for Xspec and Sherpa)", + "uid": "github/donishadsmith/neurocaps", + "url": "https://github.com/donishadsmith/neurocaps", + "rel": "/software/repository/github/donishadsmith/neurocaps", + "avatar": "https://avatars.githubusercontent.com/u/112973674?v=4", + "description": "A Python package for performing Co-Activation Patterns (CAPs) analyses on resting-state and task-based fMRI data.", "topics": [ - "nested-sampling", + "neuroimaging", + "fmri", + "kmeans", + "fmriprep", "python", - "x-ray-astronomy", - "spectroscopy", - "xspec", - "sherpa", - "model-selection" + "dynamic-functional-connectivity", + "co-activation-patterns" ] }, { - "uid": "github/JohannesBuchner/nway", - "url": "https://github.com/JohannesBuchner/nway", - "rel": "/software/repository/github/JohannesBuchner/nway", - "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", - "description": "nway -- Bayesian cross-matching of astronomical catalogues", + "uid": "github/octopus-sensing/octopus-sensing", + "url": "https://github.com/octopus-sensing/octopus-sensing", + "rel": "/software/repository/github/octopus-sensing/octopus-sensing", + "avatar": "https://avatars.githubusercontent.com/u/87042708?v=4", + "description": null, "topics": [ - "astronomy", - "catalogue", - "association", - "bayesian-inference", - "python" + "experience-scenarios", + "questionnaire", + "eeg", + "gsr", + "shimmer", + "ppg" ] }, { - "uid": "github/JohannesBuchner/UltraNest", - "url": "https://github.com/JohannesBuchner/UltraNest", - "rel": "/software/repository/github/JohannesBuchner/UltraNest", - "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", - "description": "Fit and compare complex models reliably and rapidly. Advanced nested sampling.", - "topics": [ - "nested-sampling", - "python", - "model-selection", - "parallel-computing", - "monte-carlo" - ] + "uid": "github/toddy15/medicalterms", + "url": "https://github.com/toddy15/medicalterms", + "rel": "/software/repository/github/toddy15/medicalterms", + "avatar": "https://avatars.githubusercontent.com/u/12176273?v=4", + "description": "German medical dictionary words", + "topics": [] }, { - "uid": "github/JohannesBuchner/PyMultiNest", - "url": "https://github.com/JohannesBuchner/PyMultiNest", - "rel": "/software/repository/github/JohannesBuchner/PyMultiNest", - "avatar": "https://avatars.githubusercontent.com/u/51015?v=4", - "description": "Pythonic Bayesian inference and visualization for the MultiNest Nested Sampling Algorithm and PyCuba's cubature algorithms.", - "topics": [ - "nested-sampling", - "python", - "monte-carlo" - ] + "uid": "github/rivasiker/PhaseTypeR", + "url": "https://github.com/rivasiker/PhaseTypeR", + "rel": "/software/repository/github/rivasiker/PhaseTypeR", + "avatar": "https://avatars.githubusercontent.com/u/54534843?v=4", + "description": "General-purpose phase-type functions", + "topics": [] }, { - "uid": "github/ezquiaga/phazap", - "url": "https://github.com/ezquiaga/phazap", - "rel": "/software/repository/github/ezquiaga/phazap", - "avatar": "https://avatars.githubusercontent.com/u/58956463?v=4", - "description": "Gravitational wave phase reconstruction for low-latency identification of strongly lensed signals", + "uid": "github/sterinaldi/FIGARO", + "url": "https://github.com/sterinaldi/FIGARO", + "rel": "/software/repository/github/sterinaldi/FIGARO", + "avatar": "https://avatars.githubusercontent.com/u/56389680?v=4", + "description": "Fast Inference for GW Astronomy, Research and Observations", "topics": [] }, { - "uid": "github/pcubillos/mc3", - "url": "https://github.com/pcubillos/mc3", - "rel": "/software/repository/github/pcubillos/mc3", - "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", - "description": "Python MCMC Sampler", - "topics": [ - "mcmc", - "python" - ] + "uid": "github/indrops/indrops", + "url": "https://github.com/indrops/indrops", + "rel": "/software/repository/github/indrops/indrops", + "avatar": "https://avatars.githubusercontent.com/u/21204688?v=4", + "description": "Pipeline for processing inDrops sequencing data", + "topics": [] }, { - "uid": "github/pcubillos/pyratbay", - "url": "https://github.com/pcubillos/pyratbay", - "rel": "/software/repository/github/pcubillos/pyratbay", - "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", - "description": "Python Radiative Transfer in a Bayesian Framework", + "uid": "github/ComputationalPhysiology/simcardems", + "url": "https://github.com/ComputationalPhysiology/simcardems", + "rel": "/software/repository/github/ComputationalPhysiology/simcardems", + "avatar": "https://avatars.githubusercontent.com/u/48671306?v=4", + "description": "Simula Cardiac ElectroMechanics Solver", "topics": [] }, { - "uid": "github/pcubillos/repack", - "url": "https://github.com/pcubillos/repack", - "rel": "/software/repository/github/pcubillos/repack", - "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", - "description": "Repack and compress line-transition data", + "uid": "github/tkzeng/Pangolin", + "url": "https://github.com/tkzeng/Pangolin", + "rel": "/software/repository/github/tkzeng/Pangolin", + "avatar": "https://avatars.githubusercontent.com/u/21118492?v=4", + "description": "Pangolin is a deep-learning method for predicting splice site strengths.", + "topics": [] + }, + { + "uid": "github/mommermi/photometrypipeline", + "url": "https://github.com/mommermi/photometrypipeline", + "rel": "/software/repository/github/mommermi/photometrypipeline", + "avatar": "https://avatars.githubusercontent.com/u/16566333?v=4", + "description": "automated photometry pipeline for small to medium-sized observatories", "topics": [ - "radiative-transfer", - "exoplanets", - "spectroscopy", - "hitran", - "exomol" + "astronomy", + "astronomical-images", + "pipeline", + "data-analysis", + "photometry", + "astrometry" ] }, { - "uid": "github/pcubillos/rate", - "url": "https://github.com/pcubillos/rate", - "rel": "/software/repository/github/pcubillos/rate", - "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", - "description": "Reliable Analytic Thermochemical Equilibrium", + "uid": "github/lgbouma/gyro-interp", + "url": "https://github.com/lgbouma/gyro-interp", + "rel": "/software/repository/github/lgbouma/gyro-interp", + "avatar": "https://avatars.githubusercontent.com/u/13185735?v=4", + "description": "Gyrochronology via interpolation of open cluster rotation sequences.", "topics": [] }, { - "uid": "github/pcubillos/gen_tso", - "url": "https://github.com/pcubillos/gen_tso", - "rel": "/software/repository/github/pcubillos/gen_tso", - "avatar": "https://avatars.githubusercontent.com/u/2119263?v=4", - "description": "A general TSO simulator for exoplanets with JWST", - "topics": [ - "etc", - "exoplanets", - "jwst" - ] + "uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", + "url": "https://github.com/Biomedical-Imaging-Group/Steer-n-Detect", + "rel": "/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", + "avatar": "https://avatars.githubusercontent.com/u/37145655?v=4", + "description": "ImageJ plugin - Steerable Template Detector", + "topics": [] }, { - "uid": "github/cabb99/open3spn2", - "url": "https://github.com/cabb99/open3spn2", - "rel": "/software/repository/github/cabb99/open3spn2", - "avatar": "https://avatars.githubusercontent.com/u/2429859?v=4", - "description": "An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM", + "uid": "github/christinahedges/TESS-SIP", + "url": "https://github.com/christinahedges/TESS-SIP", + "rel": "/software/repository/github/christinahedges/TESS-SIP", + "avatar": "https://avatars.githubusercontent.com/u/14965634?v=4", + "description": "Long term rotation period finding tool for NASA's TESS mission", + "topics": [] + }, + { + "uid": "github/christinahedges/contaminante", + "url": "https://github.com/christinahedges/contaminante", + "rel": "/software/repository/github/christinahedges/contaminante", + "avatar": "https://avatars.githubusercontent.com/u/14965634?v=4", + "description": "Find the contaminant transiting source in Kepler, K2 or TESS data.", + "topics": [] + }, + { + "uid": "github/PeterDenton/ANA", + "url": "https://github.com/PeterDenton/ANA", + "rel": "/software/repository/github/PeterDenton/ANA", + "avatar": "https://avatars.githubusercontent.com/u/1834435?v=4", + "description": "Astrophysical Neutrino Anisotropy", "topics": [ - "dna", - "forcefield", - "openmm" + "icecube", + "neutrino", + "anisotropy", + "arxiv", + "physics", + "astroparticle-physics", + "markov-chain-monte-carlo", + "galactic", + "extragalactic" ] }, { - "uid": "github/vergauwenthomas/MetObs_toolkit", - "url": "https://github.com/vergauwenthomas/MetObs_toolkit", - "rel": "/software/repository/github/vergauwenthomas/MetObs_toolkit", - "avatar": "https://avatars.githubusercontent.com/u/82087298?v=4", - "description": "A toolkit for using non-traditional meteorological observations", + "uid": "github/USU-Analytics-Solution-Center/Bruno.jl", + "url": "https://github.com/USU-Analytics-Solution-Center/Bruno.jl", + "rel": "/software/repository/github/USU-Analytics-Solution-Center/Bruno.jl", + "avatar": "https://avatars.githubusercontent.com/u/94191472?v=4", + "description": "Repository for the Julia package with financial tools for data generation, asset pricing and strategy testing", + "topics": [] + }, + { + "uid": "github/szymon-datalions/pyinterpolate", + "url": "https://github.com/DataverseLabs/pyinterpolate", + "rel": "/software/repository/github/szymon-datalions/pyinterpolate", + "avatar": "https://avatars.githubusercontent.com/u/84904952?v=4", + "description": "Package with spatial analysis and spatial prediction tools", "topics": [ - "climate", - "meteorology", + "kriging", + "semivariogram", + "spatial-interpolation", + "spatial-analysis", + "poisson-kriging", + "hacktoberfest", "python", - "toolkit" + "machine-learning" ] }, { - "uid": "github/jet-net/JetNet", - "url": "https://github.com/jet-net/JetNet", - "rel": "/software/repository/github/jet-net/JetNet", - "avatar": "https://avatars.githubusercontent.com/u/86318214?v=4", - "description": "For developing and reproducing ML + HEP projects.", + "uid": "github/samsledje/ConPLex_dev", + "url": "https://github.com/samsledje/ConPLex_dev", + "rel": "/software/repository/github/samsledje/ConPLex_dev", + "avatar": "https://avatars.githubusercontent.com/u/23251453?v=4", + "description": null, "topics": [] }, { - "uid": "github/MedMaxLab/selfEEG", - "url": "https://github.com/MedMaxLab/selfEEG", - "rel": "/software/repository/github/MedMaxLab/selfEEG", - "avatar": "https://avatars.githubusercontent.com/u/119063619?v=4", - "description": "selfEEG: a Python library for Self-Supervised Learning on Electroencephalography (EEG) data", + "uid": "github/trchudley/pdemtools", + "url": "https://github.com/trchudley/pdemtools", + "rel": "/software/repository/github/trchudley/pdemtools", + "avatar": "https://avatars.githubusercontent.com/u/24896931?v=4", + "description": "Conveniently search, download, and process ArcticDEM and REMA products", "topics": [ - "deep-learning", - "eeg", - "self-supervised-learning" + "coregistration", + "dem", + "digital-elevation-model", + "geospatial", + "glaciers", + "python", + "rema", + "terrain-analysis", + "arcticdem", + "polar-geospatial-center", + "glaciology" ] }, { - "uid": "github/Biomedical-Imaging-Group/Steer-n-Detect", - "url": "https://github.com/Biomedical-Imaging-Group/Steer-n-Detect", - "rel": "/software/repository/github/Biomedical-Imaging-Group/Steer-n-Detect", - "avatar": "https://avatars.githubusercontent.com/u/37145655?v=4", - "description": "ImageJ plugin - Steerable Template Detector", + "uid": "github/kim554/wdec", + "url": "https://github.com/kim554/wdec", + "rel": "/software/repository/github/kim554/wdec", + "avatar": "https://avatars.githubusercontent.com/u/17088833?v=4", + "description": "White Dwarf Evolution Code", "topics": [] }, { - "uid": "github/andersen-lab/html", - "url": null, - "rel": "/software/repository/github/andersen-lab/html", - "avatar": "", - "description": "is a computational package that contains functions broadly useful for viral amplicon-based sequencing.", + "uid": "github/ericagol/NbodyGradient.jl", + "url": "https://github.com/ericagol/NbodyGradient.jl", + "rel": "/software/repository/github/ericagol/NbodyGradient.jl", + "avatar": "https://avatars.githubusercontent.com/u/243664?v=4", + "description": "N-body integrator computes derivatives with respect to initial conditions for TTVs, RV, Photodynamics & more", "topics": [] }, { - "uid": "github/andersen-lab/Freyja", - "url": "https://github.com/andersen-lab/Freyja", - "rel": "/software/repository/github/andersen-lab/Freyja", - "avatar": "https://avatars.githubusercontent.com/u/16296068?v=4", - "description": "Depth-weighted De-Mixing ", + "uid": "github/ericagol/TTVFaster", + "url": "https://github.com/ericagol/TTVFaster", + "rel": "/software/repository/github/ericagol/TTVFaster", + "avatar": "https://avatars.githubusercontent.com/u/243664?v=4", + "description": "First order eccentricity transit timing variations computed in Agol & Deck (2015)", "topics": [] }, { - "uid": "github/andersen-lab/ivar", - "url": "https://github.com/andersen-lab/ivar", - "rel": "/software/repository/github/andersen-lab/ivar", - "avatar": "https://avatars.githubusercontent.com/u/16296068?v=4", - "description": "iVar is a computational package that contains functions broadly useful for viral amplicon-based sequencing.", - "topics": [ - "variant-calling", - "amplicon-sequencing" - ] + "uid": "github/Planet-AI-GmbH/tfaip", + "url": "https://github.com/Planet-AI-GmbH/tfaip", + "rel": "/software/repository/github/Planet-AI-GmbH/tfaip", + "avatar": "https://avatars.githubusercontent.com/u/73832289?v=4", + "description": "Python-based research framework for developing, organizing, and deploying Deep Learning models powered by Tensorflow.", + "topics": [] }, { - "uid": "github/openjournals/joss", - "url": "https://github.com/openjournals/joss", - "rel": "/software/repository/github/openjournals/joss", - "avatar": "https://avatars3.githubusercontent.com/u/9032431?v=4", - "description": "The Journal of Open Source Software", + "uid": "github/MolecularAI/DockStreamCommunity", + "url": "https://github.com/MolecularAI/DockStreamCommunity", + "rel": "/software/repository/github/MolecularAI/DockStreamCommunity", + "avatar": "https://avatars.githubusercontent.com/u/62212926?v=4", + "description": null, "topics": [ - "journal", - "open-access", - "scientific-journals", - "scientific-software", - "publishing", - "academia", - "academic" + "reinforcement-learning", + "chemoinformatics", + "jupyter-notebook", + "denovo-design", + "astrazeneca", + "molecular-docking" ] }, { - "uid": "github/fhtouma/subgen2", - "url": "https://github.com/fhtouma/subgen2", - "rel": "/software/repository/github/fhtouma/subgen2", - "avatar": "https://avatars.githubusercontent.com/u/142860589?v=4", - "description": null, + "uid": "github/markfortune/luas", + "url": "https://github.com/markfortune/luas", + "rel": "/software/repository/github/markfortune/luas", + "avatar": "https://avatars.githubusercontent.com/u/51966164?v=4", + "description": "A small library with efficient implementations of Gaussian processes (GPs) primarily for analysing two-dimensional data sets", "topics": [] }, { - "uid": "github/ryansmcgee/seirsplus", - "url": "https://github.com/ryansmcgee/seirsplus", - "rel": "/software/repository/github/ryansmcgee/seirsplus", - "avatar": "https://avatars.githubusercontent.com/u/13767747?v=4", - "description": "Models of SEIRS epidemic dynamics with extensions, including network-structured populations, testing, contact tracing, and social distancing.", + "uid": "github/brian-team/brian2", + "url": "https://github.com/brian-team/brian2", + "rel": "/software/repository/github/brian-team/brian2", + "avatar": "https://avatars.githubusercontent.com/u/2292949?v=4", + "description": "Brian is a free, open source simulator for spiking neural networks. ", "topics": [ - "epidemiology", - "epidemiology-analysis", - "epidemic-model", - "epidemic-simulations", - "epidemics", - "covid-19", - "covid", - "sars-cov-2", - "coronavirus" + "python", + "neuroscience", + "science", + "differential-equations", + "spiking-neural-networks", + "biological-simulations", + "code-generation", + "simulation-framework", + "brian", + "computational-neuroscience", + "brian2" ] }, { - "uid": "github/agurvich/FIRE_studio", - "url": "https://github.com/agurvich/FIRE_studio", - "rel": "/software/repository/github/agurvich/FIRE_studio", - "avatar": "https://avatars.githubusercontent.com/u/7799423?v=4", - "description": "Movie Making Utilities for FIRE simulations", + "uid": "github/benedictpaten/marginPhase", + "url": "https://github.com/benedictpaten/marginPhase", + "rel": "/software/repository/github/benedictpaten/marginPhase", + "avatar": "https://avatars.githubusercontent.com/u/593440?v=4", + "description": "simultaneous haplotyping and genotyping", "topics": [] }, { - "uid": "github/vortex-exoplanet/VIP", - "url": "https://github.com/vortex-exoplanet/VIP", - "rel": "/software/repository/github/vortex-exoplanet/VIP", - "avatar": "https://avatars.githubusercontent.com/u/13556028?v=4", - "description": "VIP is a python package/library for angular, reference star and spectral differential imaging for exoplanet/disk detection through high-contrast imaging.", - "topics": [ - "data-processing", - "high-contrast-imaging", - "low-rank-approximation", - "image-processing", - "extrasolar-planets-disks", - "pca", - "mcmc" - ] + "uid": "github/afukushima/DiffCorr", + "url": "https://github.com/afukushima/DiffCorr", + "rel": "/software/repository/github/afukushima/DiffCorr", + "avatar": "https://avatars.githubusercontent.com/u/1477136?v=4", + "description": null, + "topics": [] }, { - "uid": "github/deweylab/RSEM", - "url": "https://github.com/deweylab/RSEM", - "rel": "/software/repository/github/deweylab/RSEM", - "avatar": "https://avatars.githubusercontent.com/u/8928563?v=4", - "description": "RSEM: accurate quantification of gene and isoform expression from RNA-Seq data", + "uid": "github/Jeremycouturier/NcorpiON", + "url": "https://github.com/Jeremycouturier/NcorpiON", + "rel": "/software/repository/github/Jeremycouturier/NcorpiON", + "avatar": "https://avatars.githubusercontent.com/u/49401230?v=4", + "description": "The official github repository of NcorpiON", "topics": [] }, { - "uid": "github/ZJUFanLab/scTITANS", - "url": "https://github.com/ZJUFanLab/scTITANS", - "rel": "/software/repository/github/ZJUFanLab/scTITANS", - "avatar": "https://avatars.githubusercontent.com/u/53822310?v=4", - "description": "Identifying key genes and cell subclusters for time-series single cell sequencing data", - "topics": [ - "single-cell-rna-seq", - "time-series-analysis" - ] + "uid": "github/mgm8/pyngham", + "url": "https://github.com/mgm8/pyngham", + "rel": "/software/repository/github/mgm8/pyngham", + "avatar": "https://avatars.githubusercontent.com/u/5316364?v=4", + "description": "Python library of the NGHam protocol", + "topics": [] }, { - "uid": "github/ZJUFanLab/bulk2space", - "url": "https://github.com/ZJUFanLab/bulk2space", - "rel": "/software/repository/github/ZJUFanLab/bulk2space", - "avatar": "https://avatars.githubusercontent.com/u/53822310?v=4", - "description": "a spatial deconvolution method based on deep learning frameworks, which converts bulk transcriptomes into spatially resolved single-cell expression profiles", - "topics": [ - "bulk-sequencing", - "deep-learning", - "scrna-seq", - "spatial-transcriptomics" - ] + "uid": "github/lofar-astron/DP3", + "url": "https://github.com/lofar-astron/DP3", + "rel": "/software/repository/github/lofar-astron/DP3", + "avatar": "https://avatars.githubusercontent.com/u/13587881?v=4", + "description": "DP3: streaming processing pipeline for radio interferometric data", + "topics": [] }, { - "uid": "github/nmslib/hnswlib", - "url": "https://github.com/nmslib/hnswlib", - "rel": "/software/repository/github/nmslib/hnswlib", - "avatar": "https://avatars.githubusercontent.com/u/37882366?v=4", - "description": "Header-only C++/python library for fast approximate nearest neighbors", + "uid": "github/lofar-astron/RMextract", + "url": "https://github.com/lofar-astron/RMextract", + "rel": "/software/repository/github/lofar-astron/RMextract", + "avatar": "https://avatars.githubusercontent.com/u/13587881?v=4", + "description": "extract TEC, vTEC, Earthmagnetic field and Rotation Measures from GPS and WMM data for radio interferometry observations ", "topics": [] }, { - "uid": "github/rudolffu/pyfosc", - "url": "https://github.com/rudolffu/pyfosc", - "rel": "/software/repository/github/rudolffu/pyfosc", - "avatar": "https://avatars.githubusercontent.com/u/23732534?v=4", - "description": "PyFOSC is a pipeline toolbox for spectroscopic data reduction written in Python. It can be used for FOSC data from Xinglong/Lijiang 2-meter telescopes.", + "uid": "github/ANSES-Ploufragan/vvv2_display", + "url": "https://github.com/ANSES-Ploufragan/vvv2_display", + "rel": "/software/repository/github/ANSES-Ploufragan/vvv2_display", + "avatar": "https://avatars.githubusercontent.com/u/43985978?v=4", + "description": "Create png file of variants proportions in an assembly/reference including CDS positions using output of vadr 1.5.1 (annotation) and vardict-java 1.8.3 (variant calling)", "topics": [ - "iraf", - "pyraf", - "astroconda", - "spectroscopy", - "pipeline-toolbox" + "annotation", + "bioinformatics", + "display", + "variant-calling", + "virus" ] }, { - "uid": "github/lucaskorol21/GO-RXR", - "url": "https://github.com/lucaskorol21/GO-RXR", - "rel": "/software/repository/github/lucaskorol21/GO-RXR", - "avatar": "https://avatars.githubusercontent.com/u/74730122?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/achael/eht-imaging", - "url": "https://github.com/achael/eht-imaging", - "rel": "/software/repository/github/achael/eht-imaging", - "avatar": "https://avatars.githubusercontent.com/u/14789925?v=4", - "description": "Imaging, analysis, and simulation software for radio interferometry", - "topics": [] - }, - { - "uid": "github/Hoecker-Lab/atligator", - "url": "https://github.com/Hoecker-Lab/atligator", - "rel": "/software/repository/github/Hoecker-Lab/atligator", - "avatar": "https://avatars.githubusercontent.com/u/72266843?v=4", - "description": "Analysis and design of protein-protein or protein-peptide interactions based on atlas database.", + "uid": "github/PaulKuin/uvotpy", + "url": "https://github.com/PaulKuin/uvotpy", + "rel": "/software/repository/github/PaulKuin/uvotpy", + "avatar": "https://avatars.githubusercontent.com/u/5159688?v=4", + "description": "Swift UVOT grisms - spectral extraction", "topics": [] }, { - "uid": "github/alastair-droop/fqtools", - "url": "https://github.com/alastair-droop/fqtools", - "rel": "/software/repository/github/alastair-droop/fqtools", - "avatar": "https://avatars.githubusercontent.com/u/13238060?v=4", - "description": "An efficient FASTQ manipulation suite", + "uid": "github/nickfarrow/GalacticDNSMass", + "url": "https://github.com/nickfarrow/GalacticDNSMass", + "rel": "/software/repository/github/nickfarrow/GalacticDNSMass", + "avatar": "https://avatars.githubusercontent.com/u/24557779?v=4", + "description": "How heavy are Neutron Stars in binary systems within our Galaxy? A demonstration of how bayesian inference and nested sampling allows us to explore the mass distributions of Galactic Double Neutron Star systems.", "topics": [ - "fastq", - "fastq-files", - "next-generation-sequencing", - "bioinformatics" + "physics", + "bayesian-inference", + "astrophysics", + "neutron-star" ] }, { - "uid": "github/xzackli/WignerFamilies.jl", - "url": "https://github.com/xzackli/WignerFamilies.jl", - "rel": "/software/repository/github/xzackli/WignerFamilies.jl", - "avatar": "https://avatars.githubusercontent.com/u/8048811?v=4", - "description": "compute families of wigner symbols with recurrence relations", + "uid": "github/DeepRegNet/DeepReg", + "url": "https://github.com/DeepRegNet/DeepReg", + "rel": "/software/repository/github/DeepRegNet/DeepReg", + "avatar": "https://avatars2.githubusercontent.com/u/68382534?v=4", + "description": "Medical image registration using deep learning", "topics": [ - "wigner-symbols", - "wigner-3j", - "julia", - "quantum", - "cosmology" + "image-registration", + "medical-image-registration", + "image-fusion", + "deep-learning", + "deep-neural-networks", + "neural-network", + "convolutional-neural-networks", + "tensorflow2", + "deepreg" ] }, { - "uid": "github/cns-iu/HRA-supporting-information", - "url": "https://github.com/cns-iu/HRA-supporting-information", - "rel": "/software/repository/github/cns-iu/HRA-supporting-information", - "avatar": "https://avatars.githubusercontent.com/u/10944420?v=4", - "description": null, + "uid": "github/JCGonzS/mechnetor", + "url": "https://github.com/JCGonzS/mechnetor", + "rel": "/software/repository/github/JCGonzS/mechnetor", + "avatar": "https://avatars.githubusercontent.com/u/19487825?v=4", + "description": "Protein Interaction Visualization", "topics": [] }, { - "uid": "github/QuantEcon/QuantEcon.py", - "url": "https://github.com/QuantEcon/QuantEcon.py", - "rel": "/software/repository/github/QuantEcon/QuantEcon.py", - "avatar": "https://avatars1.githubusercontent.com/u/8703060?v=4", - "description": "A community based Python library for quantitative economics", + "uid": "github/JuliaMatrices/BandedMatrices.jl", + "url": "https://github.com/JuliaMatrices/BandedMatrices.jl", + "rel": "/software/repository/github/JuliaMatrices/BandedMatrices.jl", + "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", + "description": "A Julia package for representing banded matrices", "topics": [] }, { - "uid": "github/barbarabodinier/fake", - "url": "https://github.com/barbarabodinier/fake", - "rel": "/software/repository/github/barbarabodinier/fake", - "avatar": "https://avatars.githubusercontent.com/u/25798013?v=4", - "description": "R package fake (Flexible Data Simulation Using The Multivariate Normal Distribution).", + "uid": "github/JuliaMatrices/BlockBandedMatrices.jl", + "url": "https://github.com/JuliaMatrices/BlockBandedMatrices.jl", + "rel": "/software/repository/github/JuliaMatrices/BlockBandedMatrices.jl", + "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", + "description": "A Julia package for representing block-banded matrices and banded-block-banded matrices", "topics": [] }, { - "uid": "github/vferat/pycrostates", - "url": "https://github.com/vferat/pycrostates", - "rel": "/software/repository/github/vferat/pycrostates", - "avatar": "https://avatars.githubusercontent.com/u/28844486?v=4", - "description": null, - "topics": [ - "eeg", - "eeg-analysis" - ] - }, - { - "uid": "github/saberyoung/haffet", - "url": "https://github.com/saberyoung/HAFFET", - "rel": "/software/repository/github/saberyoung/haffet", - "avatar": "https://avatars.githubusercontent.com/u/7788642?v=4", - "description": "Repository to analyze SN photometric and spectroscopic data", + "uid": "github/JuliaMatrices/LazyBandedMatrices.jl", + "url": "https://github.com/JuliaMatrices/LazyBandedMatrices.jl", + "rel": "/software/repository/github/JuliaMatrices/LazyBandedMatrices.jl", + "avatar": "https://avatars.githubusercontent.com/u/20272228?v=4", + "description": "A Julia package for lazy banded matrices", "topics": [] }, { - "uid": "github/pmaxted/pycheops", - "url": "https://github.com/pmaxted/pycheops", - "rel": "/software/repository/github/pmaxted/pycheops", - "avatar": "https://avatars.githubusercontent.com/u/19465694?v=4", - "description": "Python module for the analysis of light curves from the ESA Cheops mission", + "uid": "github/RoryChenXY/DataRepExp_public", + "url": "https://github.com/RoryChenXY/DataRepExp_public", + "rel": "/software/repository/github/RoryChenXY/DataRepExp_public", + "avatar": "https://avatars.githubusercontent.com/u/30110719?v=4", + "description": "A shiny app that was developed to improve the FAIR of research data hosted on data repository.", "topics": [] }, { - "uid": "github/ValeevGroup/mpqc", - "url": "https://github.com/ValeevGroup/mpqc", - "rel": "/software/repository/github/ValeevGroup/mpqc", - "avatar": "https://avatars.githubusercontent.com/u/5217762?v=4", - "description": "The Massively Parallel Quantum Chemistry program, MPQC, computes properties of atoms and molecules from first principles using the time independent Schr\u00f6dinger equation.", + "uid": "github/a8864666-rgb/fgoc", + "url": "https://github.com/a8864666-rgb/fgoc", + "rel": "/software/repository/github/a8864666-rgb/fgoc", + "avatar": "https://avatars.githubusercontent.com/u/240145241?v=4", + "description": "FGOC: Focal-Geometry and Curvature classifier for early identification of non-Keplerian and interstellar trajectories in LSST short-arc astrometry.", "topics": [] }, { - "uid": "github/DerrickWood/kraken2", - "url": "https://github.com/DerrickWood/kraken2", - "rel": "/software/repository/github/DerrickWood/kraken2", - "avatar": "https://avatars.githubusercontent.com/u/5395172?v=4", - "description": "The second version of the Kraken taxonomic sequence classification system ", + "uid": "github/ahwkuepper/mcluster", + "url": "https://github.com/ahwkuepper/mcluster", + "rel": "/software/repository/github/ahwkuepper/mcluster", + "avatar": "https://avatars.githubusercontent.com/u/4366828?v=4", + "description": "McLuster - a tool to make a star cluster", "topics": [] }, { - "uid": "github/dmentipl/plonk", - "url": "https://github.com/dmentipl/plonk", - "rel": "/software/repository/github/dmentipl/plonk", - "avatar": "https://avatars.githubusercontent.com/u/8281189?v=4", - "description": "Smoothed particle hydrodynamics analysis and visualization with Python.", + "uid": "github/alicia-ziying-yang/conTEXT-explorer", + "url": "https://github.com/alicia-ziying-yang/conTEXT-explorer", + "rel": "/software/repository/github/alicia-ziying-yang/conTEXT-explorer", + "avatar": "https://avatars.githubusercontent.com/u/81403454?v=4", + "description": "ConTEXT Explorer is an open Web-based system for exploring and visualizing concepts (combinations of occurring words and phrases) over time in the text documents.", "topics": [ - "smoothed-particle-hydrodynamics", - "python", - "astronomy", - "visualization" + "data-science", + "data-visualization", + "data-analysis", + "nature-language-process", + "information-retrieval", + "webapp" ] }, { - "uid": "github/dtanoglidis/DeepShadows", - "url": "https://github.com/dtanoglidis/DeepShadows", - "rel": "/software/repository/github/dtanoglidis/DeepShadows", - "avatar": "https://avatars.githubusercontent.com/u/26015096?v=4", - "description": "Repository for the project \"DeepShadows: Separating LSBGs from artifacts using Deep Learning\"", + "uid": "github/USNavalResearchLaboratory/eispac", + "url": "https://github.com/USNavalResearchLaboratory/eispac", + "rel": "/software/repository/github/USNavalResearchLaboratory/eispac", + "avatar": "https://avatars.githubusercontent.com/u/20360572?v=4", + "description": "Read the Docs", + "topics": [] + }, + { + "uid": "github/cabb99/open3spn2", + "url": "https://github.com/cabb99/open3spn2", + "rel": "/software/repository/github/cabb99/open3spn2", + "avatar": "https://avatars.githubusercontent.com/u/2429859?v=4", + "description": "An implementation of the 3SPN2 and 3SPN2.C coarse-grained DNA forcefields in OpenMM", "topics": [ - "deep-learning", - "galaxies" + "dna", + "forcefield", + "openmm" ] }, { - "uid": "github/henry2004y/Vlasiator.jl", - "url": "https://github.com/henry2004y/Vlasiator.jl", - "rel": "/software/repository/github/henry2004y/Vlasiator.jl", - "avatar": "https://avatars.githubusercontent.com/u/20110816?v=4", - "description": "Data processor for Vlasiator", + "uid": "github/rehamelkholy/NutMaat", + "url": "https://github.com/rehamelkholy/NutMaat", + "rel": "/software/repository/github/rehamelkholy/NutMaat", + "avatar": "https://avatars.githubusercontent.com/u/39960662?v=4", + "description": "A Python library for classifying stellar spectra based on the MKCLASS package", "topics": [] }, { - "uid": "github/e-koch/FilFinder", - "url": "https://github.com/e-koch/FilFinder", - "rel": "/software/repository/github/e-koch/FilFinder", - "avatar": "https://avatars.githubusercontent.com/u/3255771?v=4", - "description": "Detection of filamentary structure in molecular clouds", - "topics": [] + "uid": "github/JPenuchot/ctbench", + "url": "https://github.com/JPenuchot/ctbench", + "rel": "/software/repository/github/JPenuchot/ctbench", + "avatar": "https://avatars.githubusercontent.com/u/852191?v=4", + "description": "Compiler-assisted variable size benchmarking for the study of C++ metaprogram compile times.", + "topics": [ + "clang", + "benchmark", + "metaprogramming", + "gcc", + "compilation", + "data-analysis", + "data-visualization" + ] }, { - "uid": "github/NASA-Planetary-Science/Pade-disk-code", - "url": "https://github.com/NASA-Planetary-Science/Pade-disk-code", - "rel": "/software/repository/github/NASA-Planetary-Science/Pade-disk-code", - "avatar": "https://avatars.githubusercontent.com/u/13382964?v=4", - "description": "Fortran90 code to simulate protoplanetary disk turbulence using Pade/compact differencing.", + "uid": "github/raphael-group/chisel", + "url": "https://github.com/raphael-group/chisel", + "rel": "/software/repository/github/raphael-group/chisel", + "avatar": "https://avatars.githubusercontent.com/u/5168500?v=4", + "description": "CHISEL -- Copy-number Haplotype Inference in Single-cell by Evolutionary Links", "topics": [] }, { - "uid": "github/tkzeng/Pangolin", - "url": "https://github.com/tkzeng/Pangolin", - "rel": "/software/repository/github/tkzeng/Pangolin", - "avatar": "https://avatars.githubusercontent.com/u/21118492?v=4", - "description": "Pangolin is a deep-learning method for predicting splice site strengths.", + "uid": "github/raphael-group/hatchet", + "url": "https://github.com/raphael-group/hatchet", + "rel": "/software/repository/github/raphael-group/hatchet", + "avatar": "https://avatars.githubusercontent.com/u/5168500?v=4", + "description": "HATCHet (Holistic Allele-specific Tumor Copy-number Heterogeneity) is an algorithm that infers allele and clone-specific CNAs and WGDs jointly across multiple tumor samples from the same patient, and that leverages the relationships between clones in these samples.", "topics": [] }, { - "uid": "github/srdc/onfhir", - "url": "https://github.com/srdc/onfhir", - "rel": "/software/repository/github/srdc/onfhir", - "avatar": "https://avatars.githubusercontent.com/u/4221663?v=4", - "description": "HL7 FHIR Based Secure Data Repository", - "topics": [ - "fhir-server", - "hl7", - "fhir", - "health-informatics", - "mhealth", - "scala", - "java" - ] + "uid": "github/COMBINE-lab/cuttlefish", + "url": "https://github.com/COMBINE-lab/cuttlefish", + "rel": "/software/repository/github/COMBINE-lab/cuttlefish", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "a fast, parallel, and very lightweight memory tool to construct the compacted de Bruijn graph from genome reference(s).", + "topics": [] }, { - "uid": "github/wangjun1996/VisFeature", - "url": "https://github.com/wangjun1996/VisFeature", - "rel": "/software/repository/github/wangjun1996/VisFeature", - "avatar": "https://avatars0.githubusercontent.com/u/43462056?v=4", - "description": "A stand-alone program for visualizing and analyzing statistical features of biological sequences", + "uid": "github/COMBINE-lab/RapMap", + "url": "https://github.com/COMBINE-lab/RapMap", + "rel": "/software/repository/github/COMBINE-lab/RapMap", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "Rapid sensitive and accurate read mapping via quasi-mapping", "topics": [] }, { - "uid": "github/isglobal-brge/dsExposome", - "url": "https://github.com/isglobal-brge/dsExposome", - "rel": "/software/repository/github/isglobal-brge/dsExposome", - "avatar": "https://avatars.githubusercontent.com/u/22591681?v=4", - "description": "DataSHIELD server functions for the exposome data analysis", + "uid": "github/COMBINE-lab/libgff", + "url": "https://github.com/COMBINE-lab/libgff", + "rel": "/software/repository/github/COMBINE-lab/libgff", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "GFF/GTF parsing from cufflinks as a library", "topics": [] }, { - "uid": "github/instituteofmechanics/paraqus", - "url": "https://github.com/InstituteOfMechanics/Paraqus", - "rel": "/software/repository/github/instituteofmechanics/paraqus", - "avatar": "https://avatars.githubusercontent.com/u/153821080?v=4", - "description": "An exporter for Abaqus output data to the VTK/VTU file format.", + "uid": "github/COMBINE-lab/oarfish", + "url": "https://github.com/COMBINE-lab/oarfish", + "rel": "/software/repository/github/COMBINE-lab/oarfish", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "long read RNA-seq quantification", "topics": [] }, { - "uid": "github/MichaelAbdul-Masih/SPAMMS", - "url": "https://github.com/MichaelAbdul-Masih/SPAMMS", - "rel": "/software/repository/github/MichaelAbdul-Masih/SPAMMS", - "avatar": "https://avatars.githubusercontent.com/u/40573575?v=4", - "description": null, - "topics": [] + "uid": "github/COMBINE-lab/salmon", + "url": "https://github.com/COMBINE-lab/salmon", + "rel": "/software/repository/github/COMBINE-lab/salmon", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "\ud83d\udc1f \ud83c\udf63 \ud83c\udf71 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment", + "topics": [ + "quasi-mapping", + "bioinformatics", + "rna-seq", + "rnaseq", + "salmon", + "quantification", + "sailfish", + "c-plus-plus", + "gene-expression", + "scrna-seq", + "single-cell", + "10x", + "selective-alignment", + "rna-seq-quantification", + "single-cell-rna-seq", + "transcriptome" + ] + }, + { + "uid": "github/COMBINE-lab/pufferfish", + "url": "https://github.com/COMBINE-lab/pufferfish", + "rel": "/software/repository/github/COMBINE-lab/pufferfish", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "An efficient index for the colored, compacted, de Bruijn graph", + "topics": [ + "debruijn-graph", + "debruijn", + "index", + "hash", + "contigs", + "genome", + "dbg" + ] + }, + { + "uid": "github/COMBINE-lab/terminus", + "url": "https://github.com/COMBINE-lab/terminus", + "rel": "/software/repository/github/COMBINE-lab/terminus", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "enables the discovery of data-driven, robust transcript groups from RNA-seq data.", + "topics": [ + "rna-seq", + "transcriptomics", + "gene-expression" + ] }, { - "uid": "github/cpiaulet/smint", - "url": "https://github.com/cpiaulet/smint", - "rel": "/software/repository/github/cpiaulet/smint", - "avatar": "https://avatars.githubusercontent.com/u/38121553?v=4", - "description": "Planet structure model interpolator", + "uid": "github/COMBINE-lab/simpleaf", + "url": "https://github.com/COMBINE-lab/simpleaf", + "rel": "/software/repository/github/COMBINE-lab/simpleaf", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "A rust framework to make using alevin-fry even simpler", "topics": [] }, { - "uid": "github/bxskdh/TSTA", - "url": "https://github.com/bxskdh/TSTA", - "rel": "/software/repository/github/bxskdh/TSTA", - "avatar": "https://avatars.githubusercontent.com/u/137745769?v=4", - "description": "pairwise and multiple sequence alignment accelerated by simd and threads", - "topics": [] + "uid": "github/COMBINE-lab/alevin-fry", + "url": "https://github.com/COMBINE-lab/alevin-fry", + "rel": "/software/repository/github/COMBINE-lab/alevin-fry", + "avatar": "https://avatars.githubusercontent.com/u/8410750?v=4", + "description": "\ud83d\udc1f \ud83d\udd2c\ud83e\udd80 alevin-fry is an efficient and flexible tool for processing single-cell sequencing data, currently focused on single-cell transcriptomics and feature barcoding.", + "topics": [ + "single-cell", + "rust", + "transcriptomics", + "rna-seq", + "single-cell-rna-seq", + "quantification", + "10x" + ] }, { - "uid": "github/mattevs24/reyna", - "url": "https://github.com/mattevs24/reyna", - "rel": "/software/repository/github/mattevs24/reyna", - "avatar": "https://avatars.githubusercontent.com/u/99089819?v=4", - "description": "A lightweight polytopal discontinuous Galerkin finite element library.", + "uid": "github/acil-bwh/bayes_traj", + "url": "https://github.com/acil-bwh/bayes_traj", + "rel": "/software/repository/github/acil-bwh/bayes_traj", + "avatar": "https://avatars.githubusercontent.com/u/4038495?v=4", + "description": "Algorithms and tools for Bayesian trajectory modeling", "topics": [] }, { - "uid": "github/genai-impact/ecologits", - "url": "https://github.com/genai-impact/ecologits", - "rel": "/software/repository/github/genai-impact/ecologits", - "avatar": "https://avatars.githubusercontent.com/u/166227099?v=4", - "description": "\ud83c\udf31 EcoLogits tracks the energy consumption and environmental footprint of using generative AI models through APIs.", + "uid": "github/soedinglab/spacepharer", + "url": "https://github.com/soedinglab/spacepharer", + "rel": "/software/repository/github/soedinglab/spacepharer", + "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", + "description": "SpacePHARER CRISPR Spacer Phage-Host pAiRs findER", "topics": [ - "genai", - "generative-ai", - "green-ai", - "green-software", - "llm", - "llm-inference", - "python", - "sustainability", - "sustainable-ai" + "crispr", + "host-pathogen", + "sequence-analysis", + "bioinformatics" ] }, { - "uid": "github/ginolhac/mapDamage", - "url": "https://github.com/ginolhac/mapDamage", - "rel": "/software/repository/github/ginolhac/mapDamage", - "avatar": "https://avatars.githubusercontent.com/u/710181?v=4", - "description": "mapDamage: tracking and quantifying damage patterns in ancient DNA sequences", + "uid": "github/soedinglab/hh-suite", + "url": "https://github.com/soedinglab/hh-suite", + "rel": "/software/repository/github/soedinglab/hh-suite", + "avatar": "https://avatars3.githubusercontent.com/u/7237671?v=4", + "description": "Remote protein homology detection suite.", "topics": [ - "ancient-dna-sequences", - "ngs", - "python", - "r" + "bioinformatics", + "hh-suite", + "hhblits", + "alignment", + "sequence-search", + "profile-search", + "profile-profile-search", + "opensource", + "cpp", + "hhsearch", + "hhpred", + "protein-structure", + "simd", + "viterbi" ] }, { - "uid": "github/benhid/Sequoya", - "url": "https://github.com/benhid/Sequoya", - "rel": "/software/repository/github/benhid/Sequoya", - "avatar": "https://avatars.githubusercontent.com/u/6999898?v=4", - "description": "Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics", + "uid": "github/soedinglab/metaeuk", + "url": "https://github.com/soedinglab/metaeuk", + "rel": "/software/repository/github/soedinglab/metaeuk", + "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", + "description": "MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics", "topics": [ - "metaheuristics", - "optimization", - "sequence-alignments", - "msa", - "multiple-sequence-alignment", - "python" + "metagenomics", + "eukaryotes", + "gene-prediction", + "gene-discovery", + "bioinformatics" ] }, { - "uid": "github/nigyta/dfast_core", - "url": "https://github.com/nigyta/dfast_core", - "rel": "/software/repository/github/nigyta/dfast_core", - "avatar": "https://avatars.githubusercontent.com/u/30499043?v=4", - "description": "is a flexible and customizable pipeline for prokaryotic genome annotation as well as data submission to the INSDC.", - "topics": [] + "uid": "github/soedinglab/MMseqs2", + "url": "https://github.com/soedinglab/MMseqs2", + "rel": "/software/repository/github/soedinglab/MMseqs2", + "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", + "description": "MMseqs2: ultra fast and sensitive search and clustering suite", + "topics": [ + "bioinformatics", + "sequence-clustering", + "profile-search", + "sequence-search", + "linclust", + "mmseqs", + "metagenomics", + "alignment", + "blast", + "taxonomy" + ] }, { - "uid": "github/samuelefiorini/tangle", - "url": "https://github.com/samuelefiorini/tangle", - "rel": "/software/repository/github/samuelefiorini/tangle", - "avatar": "https://avatars.githubusercontent.com/u/15000098?v=4", - "description": "TANGLE: Time spAN Guided neuraL attEntion model", + "uid": "github/soedinglab/plass", + "url": "https://github.com/soedinglab/plass", + "rel": "/software/repository/github/soedinglab/plass", + "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", + "description": "Protein-Level ASSembler (PLASS): sensitive and precise protein assembler", "topics": [ - "machine-learning", - "data-science", - "healthcare", - "medicare", - "pharmaceuticals", - "australia" + "bioinformatics", + "metagenomics", + "sequence-assembler", + "proteins", + "opensource", + "proteomics", + "metatranscriptomics" ] }, { - "uid": "github/ACEnglish/truvari", - "url": "https://github.com/ACEnglish/truvari", - "rel": "/software/repository/github/ACEnglish/truvari", - "avatar": "https://avatars.githubusercontent.com/u/2422579?v=4", - "description": "Structural variant toolkit for VCFs", + "uid": "github/soedinglab/mmseqs2", + "url": "https://github.com/soedinglab/MMseqs2", + "rel": "/software/repository/github/soedinglab/mmseqs2", + "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", + "description": "MMseqs2: ultra fast and sensitive search and clustering suite", "topics": [ - "structural-variation", - "vcf", "bioinformatics", - "data-science", - "genomics", - "vcf-comparison", - "annotation-tool", - "benchmark-scripts", - "sequencing-data", - "sv-merging" + "sequence-clustering", + "profile-search", + "sequence-search", + "linclust", + "mmseqs", + "metagenomics", + "alignment", + "blast", + "taxonomy" ] }, { - "uid": "github/compomics/xilmass", - "url": "https://github.com/compomics/xilmass", - "rel": "/software/repository/github/compomics/xilmass", - "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", - "description": "An algorithm to identify cross-linked peptides", + "uid": "github/IRL2/nanover-server-py", + "url": "https://github.com/IRL2/nanover-server-py", + "rel": "/software/repository/github/IRL2/nanover-server-py", + "avatar": "https://avatars.githubusercontent.com/u/1699106?v=4", + "description": "Interactive Molecular Dynamics (iMD) in VR", "topics": [] }, { - "uid": "github/compomics/COSS", - "url": "https://github.com/compomics/COSS", - "rel": "/software/repository/github/compomics/COSS", - "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", - "description": "COSS: CompOmics Spectral Searching", + "uid": "github/dlakaplan/pulsarsurveyscraper", + "url": "https://github.com/dlakaplan/pulsarsurveyscraper", + "rel": "/software/repository/github/dlakaplan/pulsarsurveyscraper", + "avatar": "https://avatars.githubusercontent.com/u/5092062?v=4", + "description": null, "topics": [] }, { - "uid": "github/compomics/DeepLC", - "url": "https://github.com/compomics/DeepLC", - "rel": "/software/repository/github/compomics/DeepLC", - "avatar": "https://avatars0.githubusercontent.com/u/11630937?v=4", - "description": "DeepLC: Retention time prediction for (modified) peptides using Deep Learning.", + "uid": "github/jadexter/grtrans", + "url": "https://github.com/jadexter/grtrans", + "rel": "/software/repository/github/jadexter/grtrans", + "avatar": "https://avatars.githubusercontent.com/u/15629634?v=4", + "description": "Public Kerr metric polarized ray tracing radiative transfer code", "topics": [] }, { - "uid": "github/tbisbas/PDFchem", - "url": "https://github.com/tbisbas/PDFchem", - "rel": "/software/repository/github/tbisbas/PDFchem", - "avatar": "https://avatars.githubusercontent.com/u/26414918?v=4", - "description": "Estimate the average abundance of species from Av-PDFs", + "uid": "github/BritishGeologicalSurvey/pyvolcans", + "url": "https://github.com/BritishGeologicalSurvey/pyvolcans", + "rel": "/software/repository/github/BritishGeologicalSurvey/pyvolcans", + "avatar": "https://avatars.githubusercontent.com/u/3224218?v=4", + "description": "Python tool to identify analogue volcanoes via VOLCANS (https://doi.org/10.1007/s00445-019-1336-3)", "topics": [] }, { - "uid": "github/moldyn/msmhelper", - "url": "https://github.com/moldyn/msmhelper", - "rel": "/software/repository/github/moldyn/msmhelper", - "avatar": "https://avatars.githubusercontent.com/u/45035941?v=4", - "description": "Helper function for Markov State Models", + "uid": "github/JulianZDing/UniMAP", + "url": "https://github.com/JulianZDing/UniMAP", + "rel": "/software/repository/github/JulianZDing/UniMAP", + "avatar": "https://avatars.githubusercontent.com/u/50474891?v=4", + "description": null, "topics": [] }, { - "uid": "github/carronj/plancklens", - "url": "https://github.com/carronj/plancklens", - "rel": "/software/repository/github/carronj/plancklens", - "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", - "description": "Planck 2018 lensing pipeline", + "uid": "github/srdc/onfhir", + "url": "https://github.com/srdc/onfhir", + "rel": "/software/repository/github/srdc/onfhir", + "avatar": "https://avatars.githubusercontent.com/u/4221663?v=4", + "description": "HL7 FHIR Based Secure Data Repository", "topics": [ - "cosmology", - "cosmic-microwave-background", - "gravitational-lensing", - "python-package" + "fhir-server", + "hl7", + "fhir", + "health-informatics", + "mhealth", + "scala", + "java" ] }, { - "uid": "github/carronj/lenspyx", - "url": "https://github.com/carronj/lenspyx", - "rel": "/software/repository/github/carronj/lenspyx", - "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", - "description": "Curved-sky python lensed CMB maps simulation package", + "uid": "github/fedbiomed/fedbiomed", + "url": "https://github.com/fedbiomed/fedbiomed", + "rel": "/software/repository/github/fedbiomed/fedbiomed", + "avatar": "https://avatars.githubusercontent.com/u/131657914?v=4", + "description": "A collaborative learning framework for empowering biomedical research", + "topics": [ + "ai", + "biomedical", + "clinical", + "federated", + "learning", + "analytics", + "collaborative", + "healthcare", + "multicentric" + ] + }, + { + "uid": "github/mauropieroni/fastpta", + "url": "https://github.com/Mauropieroni/fastPTA", + "rel": "/software/repository/github/mauropieroni/fastpta", + "avatar": "https://avatars.githubusercontent.com/u/17546343?v=4", + "description": "A python code to forecast the sensitivity of future Pulsar Timing Array (PTA) configurations and assess the parameter estimation of Stochastic Gravitational Wave Background (SGWB)", "topics": [] }, { - "uid": "github/carronj/LensIt", - "url": "https://github.com/carronj/LensIt", - "rel": "/software/repository/github/carronj/LensIt", - "avatar": "https://avatars.githubusercontent.com/u/11379769?v=4", - "description": null, + "uid": "github/TRACER-LULab/Hyperelastics.jl", + "url": "https://github.com/TRACER-LULab/Hyperelastics.jl", + "rel": "/software/repository/github/TRACER-LULab/Hyperelastics.jl", + "avatar": "https://avatars.githubusercontent.com/u/75383514?v=4", + "description": "Hyperelastic Material modelling with support for Automatic Differentiation", + "topics": [ + "finite-element-methods", + "hyperelasticity", + "material-model" + ] + }, + { + "uid": "github/mzemp/halogen", + "url": "https://github.com/mzemp/halogen", + "rel": "/software/repository/github/mzemp/halogen", + "avatar": "https://avatars.githubusercontent.com/u/7420777?v=4", + "description": "Tool to generate spherically symmetric initial conditions for N-body simulations.", "topics": [] }, { - "uid": "github/parkus/fiducial_flare", - "url": "https://github.com/parkus/fiducial_flare", - "rel": "/software/repository/github/parkus/fiducial_flare", - "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", - "description": "Generate spectra and lightcurves of a standardized far ultraviolet flare.", + "uid": "github/itsoulos/GlobalOptimus", + "url": "https://github.com/itsoulos/GlobalOptimus", + "rel": "/software/repository/github/itsoulos/GlobalOptimus", + "avatar": "https://avatars.githubusercontent.com/u/6303921?v=4", + "description": null, "topics": [] }, { - "uid": "github/parkus/ffd", - "url": "https://github.com/parkus/ffd", - "rel": "/software/repository/github/parkus/ffd", - "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", - "description": "Tools for the analysis of flare frequency distributions for flares detected in heterogenous datasets.", + "uid": "github/agshumate/LiftoffTools", + "url": "https://github.com/agshumate/LiftoffTools", + "rel": "/software/repository/github/agshumate/LiftoffTools", + "avatar": "https://avatars.githubusercontent.com/u/29218752?v=4", + "description": "is a toolkit to compare genes lifted between genome assemblies.", "topics": [] }, { - "uid": "github/parkus/scicatalog", - "url": "https://github.com/parkus/scicatalog", - "rel": "/software/repository/github/parkus/scicatalog", - "avatar": "https://avatars.githubusercontent.com/u/7536570?v=4", - "description": null, + "uid": "github/9505-PNNL/wmpy_power", + "url": "https://github.com/9505-PNNL/wmpy_power", + "rel": "/software/repository/github/9505-PNNL/wmpy_power", + "avatar": "https://avatars.githubusercontent.com/u/156456652?v=4", + "description": " A hydropower simulation model", "topics": [] }, { - "uid": "github/medema-group/bigslice", - "url": "https://github.com/medema-group/bigslice", - "rel": "/software/repository/github/medema-group/bigslice", - "avatar": "https://avatars0.githubusercontent.com/u/60616973?v=4", - "description": "A highly scalable, user-interactive tool for the large scale analysis of Biosynthetic Gene Clusters data", + "uid": "github/MesquiteProject/MesquiteCore", + "url": "https://github.com/MesquiteProject/MesquiteCore", + "rel": "/software/repository/github/MesquiteProject/MesquiteCore", + "avatar": "https://avatars.githubusercontent.com/u/6061432?v=4", + "description": "The core Mesquite repository", "topics": [] }, { - "uid": "github/dshawul/NebulaSEM", - "url": "https://github.com/dshawul/NebulaSEM", - "rel": "/software/repository/github/dshawul/NebulaSEM", - "avatar": "https://avatars.githubusercontent.com/u/213842?v=4", - "description": "Finite Volume (FV) and high-order Discontinuous Galerkin (DG) solver", + "uid": "github/chiaraherzog/WIDclocks", + "url": "https://github.com/chiaraherzog/WIDclocks", + "rel": "/software/repository/github/chiaraherzog/WIDclocks", + "avatar": "https://avatars.githubusercontent.com/u/68517245?v=4", + "description": "Calculation of epigenetic WID clocks", "topics": [] }, { - "uid": "github/sefffal/Octofitter.jl", - "url": "https://github.com/sefffal/Octofitter.jl", - "rel": "/software/repository/github/sefffal/Octofitter.jl", - "avatar": "https://avatars.githubusercontent.com/u/7330605?v=4", - "description": "Octofitter is a Julia package for performing Bayesian inference against a wide variety of exoplanet and binary star data.", - "topics": [ - "julia" - ] + "uid": "github/chiaraherzog/eutopsQC", + "url": "https://github.com/chiaraherzog/eutopsQC", + "rel": "/software/repository/github/chiaraherzog/eutopsQC", + "avatar": "https://avatars.githubusercontent.com/u/68517245?v=4", + "description": null, + "topics": [] }, { - "uid": "github/T-CAIREM/physionet-build", - "url": "https://github.com/T-CAIREM/physionet-build", - "rel": "/software/repository/github/T-CAIREM/physionet-build", - "avatar": "https://avatars.githubusercontent.com/u/83592847?v=4", - "description": "The new PhysioNet platform.", + "uid": "github/zhoux85/scAdapt", + "url": "https://github.com/zhoux85/scAdapt", + "rel": "/software/repository/github/zhoux85/scAdapt", + "avatar": "https://avatars.githubusercontent.com/u/31464727?v=4", + "description": null, "topics": [] }, { - "uid": "github/pawni/BayesByHypernet", - "url": "https://github.com/pawni/BayesByHypernet", - "rel": "/software/repository/github/pawni/BayesByHypernet", - "avatar": "https://avatars.githubusercontent.com/u/2412413?v=4", - "description": "Code for the paper Implicit Weight Uncertainty in Neural Networks", + "uid": "github/kreshuklab/plant-seg", + "url": "https://github.com/kreshuklab/plant-seg", + "rel": "/software/repository/github/kreshuklab/plant-seg", + "avatar": "https://avatars.githubusercontent.com/u/45267108?v=4", + "description": " A tool for cell instance aware segmentation in densely packed 3D volumetric images ", "topics": [ + "segmentation", "deep-learning", - "variational-inference", - "deep-neural-networks", - "tensorflow", - "bayesian-neural-networks" + "bioinformatics", + "neural-network", + "bioimage-analysis", + "image-segmentation", + "unet" ] }, { - "uid": "github/equib/equib", - "url": "https://github.com/equib/EQUIB", - "rel": "/software/repository/github/equib/equib", - "avatar": "https://avatars.githubusercontent.com/u/24842786?v=4", - "description": "EQUIB - Fortran Program for Equilibrium Atomic Populations and Line Emissivities", + "uid": "github/Mat-dp/mat-dp-core", + "url": "https://github.com/Mat-dp/mat-dp-core", + "rel": "/software/repository/github/Mat-dp/mat-dp-core", + "avatar": "https://avatars.githubusercontent.com/u/104203060?v=4", + "description": "Mat-dp core cotains the key methods used in the broader Mat-dp model. Mat-dp aims to deliver user-friendly and open-access software to study the environmental implications of materials used for building low-carbon systems.", "topics": [ - "atomic-level-populations", - "line-emissivities", - "statistical-equilibrium", - "equib", - "fortran", - "electron-density", - "electron-temperature" + "modelling-tool", + "bulk-materials", + "critical-materials", + "embodied-emissions", + "low-carbon-systems", + "material-demand" ] }, { - "uid": "github/equib/pyEQUIB", - "url": "https://github.com/equib/pyEQUIB", - "rel": "/software/repository/github/equib/pyEQUIB", - "avatar": "https://avatars3.githubusercontent.com/u/24842786?v=4", - "description": "pyEQUIB - Python Package for Plasma Diagnostics and Abundance Analysis", + "uid": "github/ComplexGroupInteractions/xgi", + "url": "https://github.com/xgi-org/xgi", + "rel": "/software/repository/github/ComplexGroupInteractions/xgi", + "avatar": "https://avatars.githubusercontent.com/u/85237625?v=4", + "description": "CompleX Group Interactions (XGI) provides an ecosystem for the analysis and representation of complex systems with group interactions.", "topics": [ - "atomic-level-populations", - "chemical-elements", - "line-emissivities", - "statistical-equilibrium", - "python", - "pyequib" + "hypergraphs" ] }, { - "uid": "github/cogent3/cogent3", - "url": "https://github.com/cogent3/cogent3", - "rel": "/software/repository/github/cogent3/cogent3", - "avatar": "https://avatars.githubusercontent.com/u/55074560?v=4", - "description": "Comparative Genomics Toolkit 3", - "topics": [ - "bioinformatics", - "pycogent", - "statistics", - "data-science", - "biology", - "genomics", - "evolution", - "biopython", - "markov-chain", - "molecular-evolution", - "non-stationary", - "phylogenetic-trees", - "phylogenetics", - "python", - "parallel", - "signal-processing", - "maximum-likelihood", - "biological-sequence-analysis", - "sequence-alignment" - ] + "uid": "github/MichaelSel/edoJS", + "url": "https://github.com/MichaelSel/edoJS", + "rel": "/software/repository/github/MichaelSel/edoJS", + "avatar": "https://avatars.githubusercontent.com/u/6091960?v=4", + "description": "A set of functions for manipulating musical pitches within a given EDO", + "topics": [] + }, + { + "uid": "github/wpb-astro/MCSED", + "url": "https://github.com/wpb-astro/MCSED", + "rel": "/software/repository/github/wpb-astro/MCSED", + "avatar": "https://avatars.githubusercontent.com/u/23195034?v=4", + "description": null, + "topics": [] }, { - "uid": "github/hsocasnavarro/NICOLE", - "url": "https://github.com/hsocasnavarro/NICOLE", - "rel": "/software/repository/github/hsocasnavarro/NICOLE", - "avatar": "https://avatars.githubusercontent.com/u/5393130?v=4", - "description": "NLTE Stokes Synthesis/Inversion Code", - "topics": [] + "uid": "github/espnet/espnet", + "url": "https://github.com/espnet/espnet", + "rel": "/software/repository/github/espnet/espnet", + "avatar": "https://avatars.githubusercontent.com/u/34493687?v=4", + "description": "End-to-End Speech Processing Toolkit", + "topics": [ + "deep-learning", + "end-to-end", + "chainer", + "pytorch", + "kaldi", + "speech-recognition", + "speech-synthesis", + "speech-translation", + "machine-translation", + "voice-conversion", + "speech-enhancement", + "speech-separation", + "singing-voice-synthesis", + "speaker-diarization", + "spoken-language-understanding" + ] }, { - "uid": "github/nathanchara/l1periodogram", - "url": "https://github.com/nathanchara/l1periodogram", - "rel": "/software/repository/github/nathanchara/l1periodogram", - "avatar": "https://avatars.githubusercontent.com/u/31962940?v=4", - "description": "This repository contains a Python implementation of the l1 periodogram as described in Hara, Bou\u00e9, Laskar, Correia 2017, MNRAS, Vol. 464, Issue 1, p.1220-1246, with a few additions.", + "uid": "github/stefanofisc/dartvetter_apj", + "url": "https://github.com/stefanofisc/dartvetter_apj", + "rel": "/software/repository/github/stefanofisc/dartvetter_apj", + "avatar": "https://avatars.githubusercontent.com/u/47246021?v=4", + "description": null, "topics": [] }, { - "uid": "github/ANP-Granular/ParticleTracking", - "url": "https://github.com/ANP-Granular/ParticleTracking", - "rel": "/software/repository/github/ANP-Granular/ParticleTracking", - "avatar": "https://avatars.githubusercontent.com/u/110225052?v=4", - "description": "Library and GUI for tracking (rod-like) particles on camera images in 2D and 3D", + "uid": "github/bio-phys/asyncmd", + "url": "https://github.com/bio-phys/asyncmd", + "rel": "/software/repository/github/bio-phys/asyncmd", + "avatar": "https://avatars.githubusercontent.com/u/30295439?v=4", + "description": "asyncmd is a library to write concurrent code to run and analyze molecular dynamics simulations using pythons async/await syntax. Computationally costly operations can be performed locally or submitted to a queuing system.", "topics": [ - "3d-reconstruction", - "microgravity", - "object-detection", - "physics" + "enhanced-sampling", + "molecular-dynamics", + "molecular-dynamics-simulation", + "slurm", + "slurm-cluster" ] }, { - "uid": "github/freqtrade/freqtrade", - "url": "https://github.com/freqtrade/freqtrade", - "rel": "/software/repository/github/freqtrade/freqtrade", - "avatar": "https://avatars.githubusercontent.com/u/37536846?v=4", - "description": "Free, open source crypto trading bot", + "uid": "github/bio-phys/BioEn", + "url": "https://github.com/bio-phys/BioEn", + "rel": "/software/repository/github/bio-phys/BioEn", + "avatar": "https://avatars2.githubusercontent.com/u/30295439?v=4", + "description": "BioEn - Bayesian Inference Of ENsembles", "topics": [ - "python", - "cryptocurrencies", - "trading-bot", - "telegram-bot", - "bitcoin", - "trade", - "cryptocurrency", - "algorithmic-trading", - "freqtrade" + "biological-simulations", + "molecular-dynamics", + "electron-paramagnetic-resonance", + "structural-biology", + "nmr", + "xray-scattering-experiments", + "bayesian-inference", + "deer", + "peldor", + "data-integration", + "saxs" ] }, { - "uid": "github/MoreiraLAB/mensadb-open", - "url": "https://github.com/MoreiraLAB/mensadb-open", - "rel": "/software/repository/github/MoreiraLAB/mensadb-open", - "avatar": "https://avatars.githubusercontent.com/u/44231805?v=4", - "description": null, + "uid": "github/MaceKuailv/seaduck", + "url": "https://github.com/MaceKuailv/seaduck", + "rel": "/software/repository/github/MaceKuailv/seaduck", + "avatar": "https://avatars.githubusercontent.com/u/52629492?v=4", + "description": "A python package that interpolates data from ocean dataset from both Eulerian and Lagrangian perspective.", "topics": [] }, { - "uid": "github/MoreiraLAB/or", - "url": "https://github.com/MoreiraLAB/or", - "rel": "/software/repository/github/MoreiraLAB/or", - "avatar": "https://avatars.githubusercontent.com/u/44231805?v=4", - "description": "Opiod Receptor Partners analysis code", + "uid": "github/freemed/freeshim", + "url": "https://github.com/freemed/freeshim", + "rel": "/software/repository/github/freemed/freeshim", + "avatar": "https://avatars.githubusercontent.com/u/842871?v=4", + "description": "opensource multiplatform medical device interface", "topics": [] }, { - "uid": "github/valboz/VBBinaryLensing", - "url": "https://github.com/valboz/VBBinaryLensing", - "rel": "/software/repository/github/valboz/VBBinaryLensing", - "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", - "description": "Microlensing light curve calculation", + "uid": "github/D4san/MultiREx-public", + "url": "https://github.com/D4san/MultiREx-public", + "rel": "/software/repository/github/D4san/MultiREx-public", + "avatar": "https://avatars.githubusercontent.com/u/114251096?v=4", + "description": "Massive planetary spectra generator", "topics": [] }, { - "uid": "github/valboz/RTModel", - "url": "https://github.com/valboz/RTModel", - "rel": "/software/repository/github/valboz/RTModel", - "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", - "description": "Microlensing modeling: fast and efficient exploration of the parameter space", - "topics": [] + "uid": "github/hpparvi/MuSCAT2_transit_pipeline", + "url": "https://github.com/hpparvi/MuSCAT2_transit_pipeline", + "rel": "/software/repository/github/hpparvi/MuSCAT2_transit_pipeline", + "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", + "description": "MuSCAT2 transit analysis pipeline", + "topics": [ + "astronomy", + "astrophysics", + "exoplanets", + "photometry", + "exoplanet-transits" + ] }, { - "uid": "github/valboz/VBMicroLensing", - "url": "https://github.com/valboz/VBMicrolensing", - "rel": "/software/repository/github/valboz/VBMicroLensing", - "avatar": "https://avatars.githubusercontent.com/u/15339823?v=4", - "description": "Microlensing computation code, including single, binary and multiple lenses", - "topics": [] + "uid": "github/hpparvi/spright", + "url": "https://github.com/hpparvi/spright", + "rel": "/software/repository/github/hpparvi/spright", + "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", + "description": "Bayesian mass-radius relation for small planets.", + "topics": [ + "astronomy", + "astrophysics", + "exoplanet-analysis", + "exoplanets" + ] }, { - "uid": "github/ntcockroft/STarFish", - "url": "https://github.com/ntcockroft/STarFish", - "rel": "/software/repository/github/ntcockroft/STarFish", - "avatar": "https://avatars0.githubusercontent.com/u/9052387?v=4", - "description": "Tool for predicting the protein targets of bioactive small molecules", - "topics": [] + "uid": "github/hpparvi/PyTransit", + "url": "https://github.com/hpparvi/PyTransit", + "rel": "/software/repository/github/hpparvi/PyTransit", + "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", + "description": "Fast and easy exoplanet transit light curve modelling.", + "topics": [ + "transiting-exoplanets", + "python", + "light-curve-models", + "transit-model", + "astrophysics", + "astronomy", + "exoplanets" + ] }, { - "uid": "github/mpip/pfft", - "url": "https://github.com/mpip/pfft", - "rel": "/software/repository/github/mpip/pfft", - "avatar": "https://avatars.githubusercontent.com/u/4056386?v=4", - "description": "Parallel fast Fourier transforms", - "topics": [] + "uid": "github/hpparvi/opents", + "url": "https://github.com/hpparvi/opents", + "rel": "/software/repository/github/hpparvi/opents", + "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", + "description": "Open exoplanet transit search pipeline", + "topics": [ + "exoplanets", + "tess", + "kepler", + "k2", + "transiting-exoplanets", + "transiting-planets", + "astronomy" + ] }, { - "uid": "github/mxwalbert/cohesivm", - "url": "https://github.com/mxwalbert/cohesivm", - "rel": "/software/repository/github/mxwalbert/cohesivm", - "avatar": "https://avatars.githubusercontent.com/u/84664695?v=4", - "description": "Combinatorial h+/e- Sample Investigation using Voltaic Measurements", + "uid": "github/hpparvi/ldtk", + "url": "https://github.com/hpparvi/ldtk", + "rel": "/software/repository/github/hpparvi/ldtk", + "avatar": "https://avatars.githubusercontent.com/u/327523?v=4", + "description": "Python toolkit for calculating stellar limb darkening profiles and model-specific coefficients using the stellar atmosphere spectrum library by Husser et al. (2013). Described in Parviainen & Aigrain, MNRAS 453, 3821\u20133826 (2015).", "topics": [ - "lab-automation", - "materials-science", "python", - "combinatorial-approach", - "high-throughput-analysis" + "limb-darkening-profiles", + "limb-darkening-models", + "astrophysics", + "astronomy", + "exoplanets", + "exoplanet-transits" ] }, { - "uid": "github/bpairet/mayo_hci", - "url": "https://github.com/bpairet/mayo_hci", - "rel": "/software/repository/github/bpairet/mayo_hci", - "avatar": "https://avatars.githubusercontent.com/u/12684447?v=4", - "description": null, + "uid": "github/umami-hep/salt", + "url": "https://github.com/umami-hep/salt", + "rel": "/software/repository/github/umami-hep/salt", + "avatar": "https://avatars.githubusercontent.com/u/104375517?v=4", + "description": "Mirror of the Salt Gitlab project", "topics": [] }, { - "uid": "github/labjg/fibmeasure", - "url": "https://github.com/labjg/fibmeasure", - "rel": "/software/repository/github/labjg/fibmeasure", - "avatar": "https://avatars.githubusercontent.com/u/8569725?v=4", - "description": "Python/Cython module to find the centre of back-illuminated optical fibres in metrology images", + "uid": "github/trichter/yam", + "url": "https://github.com/trichter/yam", + "rel": "/software/repository/github/trichter/yam", + "avatar": "https://avatars.githubusercontent.com/u/2046150?v=4", + "description": "Yet another monitoring tool using correlations of ambient noise", "topics": [] }, { - "uid": "github/ChristopherWilks/megadepth", - "url": "https://github.com/ChristopherWilks/megadepth", - "rel": "/software/repository/github/ChristopherWilks/megadepth", - "avatar": "https://avatars.githubusercontent.com/u/6289012?v=4", - "description": "BigWig and BAM utilities", + "uid": "github/ivastar/clear", + "url": "https://github.com/ivastar/clear", + "rel": "/software/repository/github/ivastar/clear", + "avatar": "https://avatars.githubusercontent.com/u/4562253?v=4", + "description": "Library for the CLEAR collaboration codebase.", "topics": [] }, { - "uid": "github/mathLab/PINA", - "url": "https://github.com/mathLab/PINA", - "rel": "/software/repository/github/mathLab/PINA", - "avatar": "https://avatars.githubusercontent.com/u/14195552?v=4", - "description": "Physics-Informed Neural networks for Advanced modeling", - "topics": [ - "physics-informed-neural-networks", - "modeling", - "machine-learning", - "deep-learning", - "python", - "pytorch", - "differential-equations", - "neural-network", - "ode", - "pde", - "physics-informed", - "hacktoberfest", - "lightining", - "pinn" - ] + "uid": "github/bio2byte/constava", + "url": "https://github.com/Bio2Byte/constava", + "rel": "/software/repository/github/bio2byte/constava", + "avatar": "https://avatars.githubusercontent.com/u/97734147?v=4", + "description": "Constava analyzes conformational ensembles calculating conformational state propensities and conformational state variability.", + "topics": [] }, { - "uid": "github/UncertainLab/Enlsip.jl", - "url": "https://github.com/UncertainLab/Enlsip.jl", - "rel": "/software/repository/github/UncertainLab/Enlsip.jl", - "avatar": "https://avatars.githubusercontent.com/u/139942346?v=4", - "description": "Enlsip.jl is the Julia version of a Fortran77 optimization library designed to solve nonlinear least squares problems under general nonlinear constraints.", + "uid": "github/INCF/one_click", + "url": "https://github.com/INCF/one_click", + "rel": "/software/repository/github/INCF/one_click", + "avatar": "https://avatars.githubusercontent.com/u/758175?v=4", + "description": "One Click Sharing", "topics": [] }, { - "uid": "github/maddataanalyst/hextractor", - "url": "https://github.com/maddataanalyst/hextractor", - "rel": "/software/repository/github/maddataanalyst/hextractor", - "avatar": "https://avatars.githubusercontent.com/u/33813997?v=4", - "description": null, - "topics": [] + "uid": "github/hannorein/rebound", + "url": "https://github.com/hannorein/rebound", + "rel": "/software/repository/github/hannorein/rebound", + "avatar": "https://avatars.githubusercontent.com/u/53376?v=4", + "description": "\ud83d\udcab An open-source multi-purpose N-body code.", + "topics": [ + "astrophysics", + "n-body", + "planetary-science", + "symplectic-integrator" + ] }, { - "uid": "github/hytrac/amber", - "url": "https://github.com/hytrac/amber", - "rel": "/software/repository/github/hytrac/amber", - "avatar": "https://avatars.githubusercontent.com/u/26089602?v=4", - "description": "The Abundance Matching Box for the Epoch of Reionization (AMBER) is a semi-numerical code for modeling the cosmic dawn and reionization.", + "uid": "github/cersonsky-lab/AniSOAP", + "url": "https://github.com/cersonsky-lab/AniSOAP", + "rel": "/software/repository/github/cersonsky-lab/AniSOAP", + "avatar": "https://avatars.githubusercontent.com/u/114077954?v=4", + "description": "Library for computing anisotropy extension to SOAP descriptors", "topics": [] }, { - "uid": "github/FridleyLab/spatialGE", - "url": "https://github.com/FridleyLab/spatialGE", - "rel": "/software/repository/github/FridleyLab/spatialGE", - "avatar": "https://avatars.githubusercontent.com/u/66082607?v=4", - "description": "Methods for visualization and analysis of spatially-resolved gene expression", + "uid": "github/tofflemire/saphires", + "url": "https://github.com/tofflemire/saphires", + "rel": "/software/repository/github/tofflemire/saphires", + "avatar": "https://avatars.githubusercontent.com/u/5099866?v=4", + "description": "Analysis tools for stellar spectroscopy", "topics": [] }, { - "uid": "github/egpbos/barcode", - "url": "https://github.com/egpbos/barcode", - "rel": "/software/repository/github/egpbos/barcode", - "avatar": "https://avatars.githubusercontent.com/u/6146598?v=4", - "description": "Bayesian reconstruction of cosmic density fields", + "uid": "github/amkozlov/raxml-ng", + "url": "https://github.com/amkozlov/raxml-ng", + "rel": "/software/repository/github/amkozlov/raxml-ng", + "avatar": "https://avatars.githubusercontent.com/u/5624530?v=4", + "description": "RAxML Next Generation: faster, easier-to-use and more flexible", "topics": [ - "bayesian-inference", - "cplusplus", - "cosmology", - "hamiltonian-monte-carlo", - "reconstruction" + "bioinformatics", + "phylogenetics", + "maximum-likelihood", + "mpi", + "pthreads" ] }, { - "uid": "github/GermanHeim/globalsearch-rs", - "url": "https://github.com/GermanHeim/globalsearch-rs", - "rel": "/software/repository/github/GermanHeim/globalsearch-rs", - "avatar": "https://avatars.githubusercontent.com/u/77305706?v=4", - "description": "A multistart framework for global optimization with scatter search and local NLP solvers written in Rust", + "uid": "github/samuelefiorini/tangle", + "url": "https://github.com/samuelefiorini/tangle", + "rel": "/software/repository/github/samuelefiorini/tangle", + "avatar": "https://avatars.githubusercontent.com/u/15000098?v=4", + "description": "TANGLE: Time spAN Guided neuraL attEntion model", "topics": [ - "math", - "optimization", - "optimization-algorithms", - "rust", - "scatter-search", - "numerical-optimization" + "machine-learning", + "data-science", + "healthcare", + "medicare", + "pharmaceuticals", + "australia" ] }, { - "uid": "github/opnavlab/sonic", - "url": "https://github.com/opnavlab/sonic", - "rel": "/software/repository/github/opnavlab/sonic", - "avatar": "https://avatars.githubusercontent.com/u/166256530?v=4", - "description": "SONIC is an object-oriented optical navigation (OPNAV) toolkit written in MATLAB.", + "uid": "github/oncoray/mirp", + "url": "https://github.com/oncoray/mirp", + "rel": "/software/repository/github/oncoray/mirp", + "avatar": "https://avatars.githubusercontent.com/u/51999016?v=4", + "description": "Medical Image Radiomics Processor", "topics": [ - "camera-calibration", - "opnav", - "projective-geometry", - "triangulation", - "astrometry" + "radiomics", + "image-processing" ] }, { - "uid": "github/labsyspharm/minerva-story", - "url": "https://github.com/labsyspharm/minerva-story", - "rel": "/software/repository/github/labsyspharm/minerva-story", - "avatar": "https://avatars2.githubusercontent.com/u/47149595?v=4", - "description": "Minerva Story is an image viewer that is designed specifically to make it easy for non-expert users to interact with complex tissue images.", + "uid": "github/cbrueffer/tophat-recondition", + "url": "https://github.com/cbrueffer/tophat-recondition", + "rel": "/software/repository/github/cbrueffer/tophat-recondition", + "avatar": "https://avatars3.githubusercontent.com/u/2705287?v=4", + "description": "Post-processor for TopHat unmapped.bam files making them useable by downstream software.", "topics": [ - "minerva", - "microscopy", - "ome", - "immunofluorescence" + "tophat", + "python", + "bioinformatics", + "sam", + "tophat-recondition", + "ngs" ] }, { - "uid": "github/LuisGoncalves1/CLOWN", - "url": "https://github.com/LuisGoncalves1/CLOWN", - "rel": "/software/repository/github/LuisGoncalves1/CLOWN", - "avatar": "https://avatars.githubusercontent.com/u/80974501?v=4", - "description": "Cloud detection software to be applied in observatories with an all-sky camera.", + "uid": "github/heli-xu/findSVI", + "url": "https://github.com/heli-xu/findSVI", + "rel": "/software/repository/github/heli-xu/findSVI", + "avatar": "https://avatars.githubusercontent.com/u/91294567?v=4", + "description": "Calculate CDC/ATSDR Social Vulnerability Index", "topics": [] }, { - "uid": "github/JCGonzS/mechnetor", - "url": "https://github.com/JCGonzS/mechnetor", - "rel": "/software/repository/github/JCGonzS/mechnetor", - "avatar": "https://avatars.githubusercontent.com/u/19487825?v=4", - "description": "Protein Interaction Visualization", + "uid": "github/LucaJRossi/NIGO", + "url": "https://github.com/LucaJRossi/NIGO", + "rel": "/software/repository/github/LucaJRossi/NIGO", + "avatar": "https://avatars.githubusercontent.com/u/10393911?v=4", + "description": "NIGO: a Numerical Integrator of Galactic Orbits", "topics": [] }, { - "uid": "github/ejsafron/SATCHEL", - "url": "https://github.com/ejsafron/SATCHEL", - "rel": "/software/repository/github/ejsafron/SATCHEL", - "avatar": "https://avatars.githubusercontent.com/u/36644265?v=4", - "description": "Pipeline to search for long-period exoplanet signals in Kepler time-series data classified on the Planet Hunters website.", + "uid": "github/ekg/freebayes", + "url": "https://github.com/freebayes/freebayes", + "rel": "/software/repository/github/ekg/freebayes", + "avatar": "https://avatars.githubusercontent.com/u/15815823?v=4", + "description": "Bayesian haplotype-based genetic polymorphism discovery and genotyping.", "topics": [] }, { - "uid": "github/bbye98/mdcraft", - "url": "https://github.com/bbye98/mdcraft", - "rel": "/software/repository/github/bbye98/mdcraft", - "avatar": "https://avatars.githubusercontent.com/u/43505873?v=4", - "description": "A Python assistant for performing and analyzing molecular dynamics simulations of soft matter systems", + "uid": "github/ekg/fastahack", + "url": "https://github.com/ekg/fastahack", + "rel": "/software/repository/github/ekg/fastahack", + "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", + "description": "utilities for indexing and sequence extraction from FASTA files", "topics": [] }, { - "uid": "github/danielreardon/scintools", - "url": "https://github.com/danielreardon/scintools", - "rel": "/software/repository/github/danielreardon/scintools", - "avatar": "https://avatars.githubusercontent.com/u/40694862?v=4", - "description": "Tools for analysing of pulsar scintillations ", + "uid": "github/ekg/smithwaterman", + "url": "https://github.com/ekg/smithwaterman", + "rel": "/software/repository/github/ekg/smithwaterman", + "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", + "description": "smith-waterman-gotoh alignment algorithm", "topics": [] }, { - "uid": "github/CMakePP/CMakePPLang", - "url": "https://github.com/CMakePP/CMakePPLang", - "rel": "/software/repository/github/CMakePP/CMakePPLang", - "avatar": "https://avatars.githubusercontent.com/u/44040020?v=4", - "description": "Object-oriented extension to the CMake language.", + "uid": "github/ekg/seqwish", + "url": "https://github.com/ekg/seqwish", + "rel": "/software/repository/github/ekg/seqwish", + "avatar": "https://avatars.githubusercontent.com/u/145425?v=4", + "description": "alignment to variation graph inducer", + "topics": [] + }, + { + "uid": "github/ekg/tabixpp", + "url": "https://github.com/vcflib/tabixpp", + "rel": "/software/repository/github/ekg/tabixpp", + "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", + "description": "C++ wrapper to tabix indexer", + "topics": [] + }, + { + "uid": "github/ireis/PRF", + "url": "https://github.com/ireis/PRF", + "rel": "/software/repository/github/ireis/PRF", + "avatar": "https://avatars.githubusercontent.com/u/23705637?v=4", + "description": "Probabilistic Random Forest: A machine learning algorithm for noisy datasets", + "topics": [] + }, + { + "uid": "github/hiddenSymmetries/simsopt", + "url": "https://github.com/hiddenSymmetries/simsopt", + "rel": "/software/repository/github/hiddenSymmetries/simsopt", + "avatar": "https://avatars.githubusercontent.com/u/61125640?v=4", + "description": "Simons Stellarator Optimizer Code", "topics": [ - "object-oriented-programming", - "cmake" + "stellarator", + "stellarators", + "plasma", + "fusion", + "optimization", + "plasma-physics", + "nuclear-fusion" ] }, { - "uid": "github/CMakePP/CMinx", - "url": "https://github.com/CMakePP/CMinx", - "rel": "/software/repository/github/CMakePP/CMinx", - "avatar": "https://avatars.githubusercontent.com/u/44040020?v=4", - "description": "Generates API documentation for CMake functions and macros", + "uid": "github/uit-cosmo/blobmodel", + "url": "https://github.com/uit-cosmo/blobmodel", + "rel": "/software/repository/github/uit-cosmo/blobmodel", + "avatar": "https://avatars.githubusercontent.com/u/76398964?v=4", + "description": "Model of propagating blobs in 1D and 2D", "topics": [ - "cmake", - "documentation-tool" + "fusion", + "modelling-tool", + "stochastic-process", + "turbulence", + "plasma", + "python", + "science" ] }, { - "uid": "github/leraman/Hopla", - "url": "https://github.com/CenterForMedicalGeneticsGhent/Hopla", - "rel": "/software/repository/github/leraman/Hopla", - "avatar": "https://avatars.githubusercontent.com/u/39293794?v=4", - "description": " Streamlined duo/trio analysis and pedigree haplotyping: from VCF to interactive HTML ", + "uid": "github/Clinical-Genomics-Umea/fraggler", + "url": "https://github.com/Clinical-Genomics-Umea/fraggler", + "rel": "/software/repository/github/Clinical-Genomics-Umea/fraggler", + "avatar": "https://avatars.githubusercontent.com/u/98591011?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/zengzhenhuan/GFNet", + "url": "https://github.com/zengzhenhuan/GFNet", + "rel": "/software/repository/github/zengzhenhuan/GFNet", + "avatar": "https://avatars.githubusercontent.com/u/53371536?v=4", + "description": null, "topics": [] }, { - "uid": "github/alexander-pastukhov/bistablehistory", - "url": "https://github.com/alexander-pastukhov/bistablehistory", - "rel": "/software/repository/github/alexander-pastukhov/bistablehistory", - "avatar": "https://avatars.githubusercontent.com/u/12910993?v=4", - "description": "A package to compute a cumulative history for time-series of perceptual dominance in bistable displays.", + "uid": "github/jnktsj/DNApi", + "url": "https://github.com/jnktsj/DNApi", + "rel": "/software/repository/github/jnktsj/DNApi", + "avatar": "https://avatars.githubusercontent.com/u/5141643?v=4", + "description": "De novo adapter prediction algorithm for small RNA sequencing data", "topics": [] }, { - "uid": "github/deeptools/deepTools", - "url": "https://github.com/deeptools/deepTools", - "rel": "/software/repository/github/deeptools/deepTools", - "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", - "description": "a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq. deepTools contains useful modules to process the mapped reads data for multiple quality checks, creating normalized coverage files in standard bedGraph and bigWig file formats, that allow comparison between different files (for example, treatment and control). Finally, using such normalized and standardized files, \u2026", + "uid": "github/A-Davies/LensCNN", + "url": "https://github.com/A-Davies/LensCNN", + "rel": "/software/repository/github/A-Davies/LensCNN", + "avatar": "https://avatars.githubusercontent.com/u/40608305?v=4", + "description": "A Python built Convolutional Neural Network to classify simulated images as containing a gravitational lens or not.", + "topics": [] + }, + { + "uid": "github/RECeSS-EU-Project/stanscofi", + "url": "https://github.com/RECeSS-EU-Project/stanscofi", + "rel": "/software/repository/github/RECeSS-EU-Project/stanscofi", + "avatar": "https://avatars.githubusercontent.com/u/132160795?v=4", + "description": "Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.", "topics": [ + "collaborative-filtering", + "drug-repurposing", + "open-science", "python", - "bioinformatics", - "genomics", - "ngs", - "rna-seq", - "chip-seq" + "science-reproducibility" ] }, { - "uid": "github/deeptools/HiCExplorer", - "url": "https://github.com/deeptools/HiCExplorer", - "rel": "/software/repository/github/deeptools/HiCExplorer", - "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", - "description": "HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.", + "uid": "github/nluetts/NoisySignalIntegration.jl", + "url": "https://github.com/nluetts/NoisySignalIntegration.jl", + "rel": "/software/repository/github/nluetts/NoisySignalIntegration.jl", + "avatar": "https://avatars.githubusercontent.com/u/44254521?v=4", + "description": null, "topics": [ - "hic", - "genomics", - "chromosome-conformation-capture", - "galaxy", - "python", - "bioinformatics" + "uncertainty", + "numeric-integrals", + "noisy-data" ] }, { - "uid": "github/deeptools/py2bit", - "url": "https://github.com/deeptools/py2bit", - "rel": "/software/repository/github/deeptools/py2bit", - "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", - "description": "A python library for accessing 2bit files", + "uid": "github/nmfs-fish-tools/ssmse", + "url": "https://github.com/nmfs-fish-tools/SSMSE", + "rel": "/software/repository/github/nmfs-fish-tools/ssmse", + "avatar": "https://avatars.githubusercontent.com/u/49072821?v=4", + "description": "Management Strategy Evaluation (MSE) using Stock Synthesis (SS3)", "topics": [ - "twobit", - "bioinformatics" + "stock-synthesis" ] }, { - "uid": "github/deeptools/deeptools_intervals", - "url": "https://github.com/deeptools/deeptools_intervals", - "rel": "/software/repository/github/deeptools/deeptools_intervals", - "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", - "description": "A python library for constructing interval trees with associated exon/annotation information", + "uid": "github/ManuelBehrendt/Mera.jl", + "url": "https://github.com/ManuelBehrendt/Mera.jl", + "rel": "/software/repository/github/ManuelBehrendt/Mera.jl", + "avatar": "https://avatars.githubusercontent.com/u/29633996?v=4", + "description": " Analysis Tool for Astrophysical Simulation Data in the Julia Language", "topics": [ - "bioinformatics", - "interval-tree", - "gtf", - "bed" + "astrophysics", + "hydrodynamics", + "fluid-dynamics", + "postprocessing", + "julia", + "ramses", + "adaptive-mesh-refinement", + "n-body", + "grid", + "julialang" ] }, { - "uid": "github/tongzhouxu/mashpit", - "url": "https://github.com/tongzhouxu/mashpit", - "rel": "/software/repository/github/tongzhouxu/mashpit", - "avatar": "https://avatars.githubusercontent.com/u/55856334?v=4", - "description": ":pencil: Sketch-based surveillance platform", - "topics": [] + "uid": "github/jmejia8/Metaheuristics.jl", + "url": "https://github.com/jmejia8/Metaheuristics.jl", + "rel": "/software/repository/github/jmejia8/Metaheuristics.jl", + "avatar": "https://avatars.githubusercontent.com/u/9757256?v=4", + "description": "High-performance metaheuristics for optimization coded purely in Julia.", + "topics": [ + "optimization", + "multi-objective-optimization", + "differential-evolution", + "simulated-annealing", + "pso", + "nsga2", + "constrained-optimization", + "hypervolume", + "decision-making" + ] }, { - "uid": "github/PedroBarbosa/VETA", - "url": "https://github.com/PedroBarbosa/VETA", - "rel": "/software/repository/github/PedroBarbosa/VETA", - "avatar": "https://avatars.githubusercontent.com/u/4269608?v=4", - "description": "VETA - A simple tool do evaluate variant predictors", + "uid": "github/elwinter/nnde", + "url": "https://github.com/elwinter/nnde", + "rel": "/software/repository/github/elwinter/nnde", + "avatar": "https://avatars.githubusercontent.com/u/6576907?v=4", + "description": "nnde is a package of Python modules which implement a set of neural networks which solve ordinary and partial differential equations. This code is based on the previous package, nnode.", "topics": [] }, { - "uid": "github/xavierdidelot/clonalorigin", - "url": "https://github.com/xavierdidelot/ClonalOrigin", - "rel": "/software/repository/github/xavierdidelot/clonalorigin", - "avatar": "https://avatars.githubusercontent.com/u/11612608?v=4", - "description": "Inference of homologous recombination in bacteria using whole genome sequences", + "uid": "github/jhkorhonen/MOODS", + "url": "https://github.com/jhkorhonen/MOODS", + "rel": "/software/repository/github/jhkorhonen/MOODS", + "avatar": "https://avatars.githubusercontent.com/u/3216254?v=4", + "description": "MOODS: Motif Occurrence Detection Suite", "topics": [] }, { - "uid": "github/xavierdidelot/ClonalFrameML", - "url": "https://github.com/xavierdidelot/ClonalFrameML", - "rel": "/software/repository/github/xavierdidelot/ClonalFrameML", - "avatar": "https://avatars.githubusercontent.com/u/11612608?v=4", - "description": "ClonalFrameML: Efficient Inference of Recombination in Whole Bacterial Genomes", - "topics": [] + "uid": "github/Shyentist/fish-r-man", + "url": "https://github.com/Shyentist/fish-r-man", + "rel": "/software/repository/github/Shyentist/fish-r-man", + "avatar": "https://avatars.githubusercontent.com/u/44335296?v=4", + "description": "Open-Source Shiny R Dashboard to easily query, download, analyse and visualise Global Fishing Watch data on fishing effort.", + "topics": [ + "marine-biology", + "fisheries", + "fisheries-research", + "fisheries-management", + "shiny", + "r", + "open-source", + "globalfishingwatch", + "global-fishing-watch", + "dashboard", + "fishing-effort" + ] }, { - "uid": "github/ckay314/OSPREI", - "url": "https://github.com/ckay314/OSPREI", - "rel": "/software/repository/github/ckay314/OSPREI", - "avatar": "https://avatars.githubusercontent.com/u/32773545?v=4", - "description": "Fully coupled system of ForeCAT-based models", + "uid": "github/Jacks0nJ/PyFPT", + "url": "https://github.com/Jacks0nJ/PyFPT", + "rel": "/software/repository/github/Jacks0nJ/PyFPT", + "avatar": "https://avatars.githubusercontent.com/u/73479437?v=4", + "description": "Stochastic first-passage time (FPT) simulations using importance sampling.", + "topics": [ + "cosmology", + "cython", + "first-passage-times", + "importance-sampling", + "inflation", + "stochastic" + ] + }, + { + "uid": "github/VincentAlcazer/StatAid", + "url": "https://github.com/VincentAlcazer/StatAid", + "rel": "/software/repository/github/VincentAlcazer/StatAid", + "avatar": "https://avatars0.githubusercontent.com/u/63184395?v=4", + "description": "StatAid is a Shiny app built in an R package to guide researchers and clinicians through data analysis", + "topics": [ + "data-analysis", + "r", + "statistics", + "life-sciences" + ] + }, + { + "uid": "github/matiscke/lcps", + "url": "https://github.com/matiscke/lcps", + "rel": "/software/repository/github/matiscke/lcps", + "avatar": "https://avatars.githubusercontent.com/u/19270173?v=4", + "description": "A tool for pre-selecting light curves with possible transit signatures", "topics": [] }, { - "uid": "github/jharno/cubep3m", - "url": "https://github.com/jharno/cubep3m", - "rel": "/software/repository/github/jharno/cubep3m", - "avatar": "https://avatars.githubusercontent.com/u/1123485?v=4", - "description": "cosmological n-body code", + "uid": "github/jimmink/argslab", + "url": "https://github.com/jimmink/argslab", + "rel": "/software/repository/github/jimmink/argslab", + "avatar": "https://avatars.githubusercontent.com/u/80682535?v=4", + "description": "Repository for ArGSLab, Arrested and Gelated Structures Laboratory.", "topics": [] }, { - "uid": "github/hyosubkim/bayes-toolbox", - "url": "https://github.com/hyosubkim/bayes-toolbox", - "rel": "/software/repository/github/hyosubkim/bayes-toolbox", - "avatar": "https://avatars.githubusercontent.com/u/32351455?v=4", - "description": "bayes-toolbox", + "uid": "github/HadrienG/InSilicoSeq", + "url": "https://github.com/HadrienG/InSilicoSeq", + "rel": "/software/repository/github/HadrienG/InSilicoSeq", + "avatar": "https://avatars.githubusercontent.com/u/7337110?v=4", + "description": ":rocket: A sequencing simulator", "topics": [ - "bayesian-inference", - "bayesian-statistics", - "kruschke", - "probabilistic-programming", - "python", - "statistics" + "bioinformatics", + "illumina-sequencing", + "sequencing", + "simulation", + "metagenomics" ] }, { - "uid": "github/paulhjkelly/taskgraph-metaprogramming", - "url": "https://github.com/paulhjkelly/taskgraph-metaprogramming", - "rel": "/software/repository/github/paulhjkelly/taskgraph-metaprogramming", - "avatar": "https://avatars.githubusercontent.com/u/2254492?v=4", - "description": "The TaskGraph Meta-programming Library is a C++ package that supports run-time code generation - programs that generate code on the fly, then execute it. And having built a piece of code, you can apply various transformations to it (such as loop interchange and tiling).", + "uid": "github/geopandas/geopandas", + "url": "https://github.com/geopandas/geopandas", + "rel": "/software/repository/github/geopandas/geopandas", + "avatar": "https://avatars2.githubusercontent.com/u/8130715?v=4", + "description": "Python tools for geographic data", "topics": [] }, { - "uid": "github/johnpaulett/python-hl7", - "url": "https://github.com/johnpaulett/python-hl7", - "rel": "/software/repository/github/johnpaulett/python-hl7", - "avatar": "https://avatars.githubusercontent.com/u/30702?v=4", - "description": "A simple library for parsing messages of Health Level 7 (HL7) version 2.x into Python objects.", + "uid": "github/henrikdvn/CRSocket", + "url": "https://github.com/henrikdvn/CRSocket", + "rel": "/software/repository/github/henrikdvn/CRSocket", + "avatar": "https://avatars.githubusercontent.com/u/115465257?v=4", + "description": "Controller-Responder Socket", "topics": [] }, { - "uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", - "url": "https://github.com/teamPSG/kNN_Sleep_Scorer_kNNSS", - "rel": "/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", - "avatar": "https://avatars1.githubusercontent.com/u/64002817?v=4", - "description": "A matlab package for automated sleep scoring using the k-nearest neighbors algorithm", - "topics": [] + "uid": "github/cthoyt/bel-resources", + "url": "https://github.com/pybel/bel-resources", + "rel": "/software/repository/github/cthoyt/bel-resources", + "avatar": "https://avatars.githubusercontent.com/u/22892058?v=4", + "description": "Utilities for BEL resource files.", + "topics": [ + "biological-expression-language", + "ontologies", + "terminologies" + ] }, { - "uid": "github/etempel/Bisous", - "url": "https://github.com/etempel/Bisous", - "rel": "/software/repository/github/etempel/Bisous", - "avatar": "https://avatars.githubusercontent.com/u/10911479?v=4", - "description": null, - "topics": [] + "uid": "github/mbhall88/rasusa", + "url": "https://github.com/mbhall88/rasusa", + "rel": "/software/repository/github/mbhall88/rasusa", + "avatar": "https://avatars.githubusercontent.com/u/20403931?v=4", + "description": "Randomly subsample sequencing reads to a specified coverage", + "topics": [ + "bioinformatics", + "fastq", + "subsampling", + "coverage", + "fasta", + "genome-analysis", + "random" + ] }, { - "uid": "github/c-zhou/yahs", - "url": "https://github.com/c-zhou/yahs", - "rel": "/software/repository/github/c-zhou/yahs", - "avatar": "https://avatars.githubusercontent.com/u/11916266?v=4", - "description": "Yet another Hi-C scaffolding tool", + "uid": "github/jellis18/PTMCMCSampler", + "url": "https://github.com/jellis18/PTMCMCSampler", + "rel": "/software/repository/github/jellis18/PTMCMCSampler", + "avatar": "https://avatars.githubusercontent.com/u/3458354?v=4", + "description": "Parallel tempering MCMC sampler package written in Python", "topics": [] }, { - "uid": "github/Jwindler/PlotHiC", - "url": "https://github.com/Jwindler/PlotHiC", - "rel": "/software/repository/github/Jwindler/PlotHiC", - "avatar": "https://avatars.githubusercontent.com/u/41459206?v=4", - "description": "The tool is employed for the visualisation of genome-wide contact heatmaps.", + "uid": "github/pydata/xarray", + "url": "https://github.com/pydata/xarray", + "rel": "/software/repository/github/pydata/xarray", + "avatar": "https://avatars0.githubusercontent.com/u/1284191?v=4", + "description": "N-D labeled arrays and datasets in Python", "topics": [ - "autohic" + "python", + "netcdf", + "numpy", + "pandas", + "xarray", + "dask" ] }, { - "uid": "github/ERPI-UL/HELP-VRclient", - "url": "https://github.com/ERPI-UL/HELP-VRclient", - "rel": "/software/repository/github/ERPI-UL/HELP-VRclient", - "avatar": "https://avatars.githubusercontent.com/u/113673811?v=4", - "description": "Hybrid Extended Learning Platform (HELP) - VR client for Meta Quest", - "topics": [] + "uid": "github/climate-machine/Oceananigans.jl", + "url": "https://github.com/CliMA/Oceananigans.jl", + "rel": "/software/repository/github/climate-machine/Oceananigans.jl", + "avatar": "https://avatars0.githubusercontent.com/u/43161188?v=4", + "description": "\ud83c\udf0a Fast and friendly fluid dynamics on CPUs and GPUs", + "topics": [ + "climate", + "ocean", + "fluid-dynamics", + "julia", + "gpu", + "climate-change" + ] }, { - "uid": "github/morriscb/The-wiZZ", - "url": "https://github.com/morriscb/the-wizz", - "rel": "/software/repository/github/morriscb/The-wiZZ", - "avatar": "https://avatars.githubusercontent.com/u/3270927?v=4", - "description": "A clustering redshift estimation code for us folks. For information on the method see Schmidt et al. 2013, Menard et al. 2013, and Rahman et al. 2015, 2016b. Details on this implementation can be found in Morrison et al. 2017", + "uid": "github/kinnala/scikit-fem", + "url": "https://github.com/kinnala/scikit-fem", + "rel": "/software/repository/github/kinnala/scikit-fem", + "avatar": "https://avatars2.githubusercontent.com/u/973268?v=4", + "description": "Simple finite element assemblers for Python", "topics": [] }, { - "uid": "github/syasini/AstroPaint", - "url": "https://github.com/syasini/AstroPaint", - "rel": "/software/repository/github/syasini/AstroPaint", - "avatar": "https://avatars0.githubusercontent.com/u/47579697?v=4", - "description": "A python package for creating mock maps of astrophysical signals from a halo catalog", + "uid": "github/dgbowl/yadg", + "url": "https://github.com/dgbowl/yadg", + "rel": "/software/repository/github/dgbowl/yadg", + "avatar": "https://avatars.githubusercontent.com/u/97680503?v=4", + "description": "yadg: yet another datagram", + "topics": [ + "parser", + "data-science", + "electrochemistry", + "chromatography", + "catalysis" + ] + }, + { + "uid": "github/lzkelley/kalepy", + "url": "https://github.com/lzkelley/kalepy", + "rel": "/software/repository/github/lzkelley/kalepy", + "avatar": "https://avatars.githubusercontent.com/u/3839265?v=4", + "description": "Kernel Density Estimation and (re)sampling", "topics": [ - "cosmology", - "astrophysical-signals", - "halo-catalog", "python", - "simulation-toolkit" + "python3", + "statistics", + "kde", + "kernel-density-estimation", + "statistical-analysis", + "resampling", + "pdfs", + "resample" ] }, { - "uid": "github/glasgowlab/MAGPIE", - "url": "https://github.com/glasgowlab/MAGPIE", - "rel": "/software/repository/github/glasgowlab/MAGPIE", - "avatar": "https://avatars.githubusercontent.com/u/98300418?v=4", - "description": "MAGPIE", + "uid": "github/LebeerLab/tidytacos", + "url": "https://github.com/LebeerLab/tidytacos", + "rel": "/software/repository/github/LebeerLab/tidytacos", + "avatar": "https://avatars.githubusercontent.com/u/29303437?v=4", + "description": "Functions to manipulate and visualize microbial community data", "topics": [ - "interactive-visualizations", - "protein-protein-interaction", - "sequence-logo", - "protein-ligand-interaction" + "microbial-communities", + "microbiome-analysis", + "r", + "tidy", + "visualization" ] }, { - "uid": "github/najoshi/sickle", - "url": "https://github.com/najoshi/sickle", - "rel": "/software/repository/github/najoshi/sickle", - "avatar": "https://avatars.githubusercontent.com/u/607905?v=4", - "description": "Windowed Adaptive Trimming for fastq files using quality", + "uid": "github/su2code/SU2", + "url": "https://github.com/su2code/SU2", + "rel": "/software/repository/github/su2code/SU2", + "avatar": "https://avatars.githubusercontent.com/u/4796189?v=4", + "description": "SU2: An Open-Source Suite for Multiphysics Simulation and Design", + "topics": [ + "cfd", + "c-plus-plus", + "simulation", + "optimization", + "python", + "opensource", + "physics", + "flow", + "fluid", + "fluid-dynamics", + "hpc" + ] + }, + { + "uid": "github/elnjensen/Tapir", + "url": "https://github.com/elnjensen/Tapir", + "rel": "/software/repository/github/elnjensen/Tapir", + "avatar": "https://avatars.githubusercontent.com/u/2545845?v=4", + "description": "Tools for planning astronomical observations (transit visibility, airmass plots, finding charts)", "topics": [] }, { - "uid": "github/exobssim/rapoc-public", - "url": "https://github.com/ExObsSim/Rapoc-public", - "rel": "/software/repository/github/exobssim/rapoc-public", - "avatar": "https://avatars.githubusercontent.com/u/68009281?v=4", - "description": "Rapoc uses molecular absorption measurements (i.e. wavelength-dependent opacities) to calculate Rosseland and Planck mean opacities that are commonly used in atmospheric modelling.", + "uid": "github/martinjameswhite/directsht", + "url": "https://github.com/martinjameswhite/directsht", + "rel": "/software/repository/github/martinjameswhite/directsht", + "avatar": "https://avatars.githubusercontent.com/u/5226247?v=4", + "description": "Direct spherical harmonic transform code for point sets on the sphere.", "topics": [] }, { - "uid": "github/regonzar/paravt", - "url": "https://github.com/regonzar/paravt", - "rel": "/software/repository/github/regonzar/paravt", - "avatar": "https://avatars.githubusercontent.com/u/6602575?v=4", - "description": "PARAVT: Parallel Voronoi Tessellation", + "uid": "github/martinjameswhite/ZeldovichRecon", + "url": "https://github.com/martinjameswhite/ZeldovichRecon", + "rel": "/software/repository/github/martinjameswhite/ZeldovichRecon", + "avatar": "https://avatars.githubusercontent.com/u/5226247?v=4", + "description": "Code to compute the post-reconstruction halo correlation function using the Zeldovich approximation.", "topics": [] }, { - "uid": "github/doriancazeneuve/ODNet", - "url": "https://github.com/doriancazeneuve/ODNet", - "rel": "/software/repository/github/doriancazeneuve/ODNet", - "avatar": "https://avatars.githubusercontent.com/u/112989778?v=4", - "description": "ODNet : Asteroid Occultation Detection Convolutional Neural Network", + "uid": "github/herrsalmi/FConverter", + "url": "https://github.com/herrsalmi/FConverter", + "rel": "/software/repository/github/herrsalmi/FConverter", + "avatar": "https://avatars0.githubusercontent.com/u/5948256?v=4", + "description": "File format converter for FImpute2", "topics": [] }, { - "uid": "github/cbrnr/sigviewer", - "url": "https://github.com/cbrnr/sigviewer", - "rel": "/software/repository/github/cbrnr/sigviewer", - "avatar": "https://avatars.githubusercontent.com/u/4377312?v=4", - "description": "SigViewer is a viewing application for biosignals.", - "topics": [ - "eeg", - "visualization" - ] + "uid": "github/josegit88/SCORPIO", + "url": "https://github.com/josegit88/SCORPIO", + "rel": "/software/repository/github/josegit88/SCORPIO", + "avatar": "https://avatars.githubusercontent.com/u/56035386?v=4", + "description": "Sky COllector of galaxy Pairs and Image Output", + "topics": [] }, { - "uid": "github/cytham/nanovar", - "url": "https://github.com/cytham/nanovar", - "rel": "/software/repository/github/cytham/nanovar", - "avatar": "https://avatars.githubusercontent.com/u/25361260?v=4", - "description": "Structural variant caller for low-depth long-read sequencing data", + "uid": "github/astrosmili/smili", + "url": "https://github.com/astrosmili/smili", + "rel": "/software/repository/github/astrosmili/smili", + "avatar": "https://avatars.githubusercontent.com/u/37384851?v=4", + "description": "SMILI: Sparse Modeling Imaging Library for Interferometry", "topics": [] }, { - "uid": "github/ajwheeler/korg.jl", - "url": "https://github.com/ajwheeler/Korg.jl", - "rel": "/software/repository/github/ajwheeler/korg.jl", - "avatar": "https://avatars.githubusercontent.com/u/711963?v=4", - "description": "1D LTE stellar spectral synthesis in pure Julia", + "uid": "github/OSUDSL/pydre", + "url": "https://github.com/OSUDSL/pydre", + "rel": "/software/repository/github/OSUDSL/pydre", + "avatar": "https://avatars.githubusercontent.com/u/71854689?v=4", + "description": "Driving simulation Data Reduction Engine ", "topics": [] }, { - "uid": "github/astromer-science/main-code", - "url": "https://github.com/astromer-science/main-code", - "rel": "/software/repository/github/astromer-science/main-code", - "avatar": "https://avatars.githubusercontent.com/u/102744454?v=4", - "description": "Latest stable implemention of ASTROMER ", - "topics": [] + "uid": "github/Santiso-Group/despasito", + "url": "https://github.com/Santiso-Group/despasito", + "rel": "/software/repository/github/Santiso-Group/despasito", + "avatar": "https://avatars.githubusercontent.com/u/61851070?v=4", + "description": "DESPASITO: Determining Equilibrium State and Parametrization Application for SAFT, Intended for Thermodynamic Output", + "topics": [ + "saft", + "thermodynamic-calculations", + "eos", + "parametrization", + "equation-of-state", + "equations-of-state" + ] + }, + { + "uid": "github/VSPEC-collab/VSPEC", + "url": "https://github.com/VSPEC-collab/VSPEC", + "rel": "/software/repository/github/VSPEC-collab/VSPEC", + "avatar": "https://avatars.githubusercontent.com/u/126274339?v=4", + "description": "Variable Star PhasE Curve: A Python tool that uses the NASA Planetary Spectrum Generator (PSG) and a variable star model to simulate observations of exoplanets.", + "topics": [ + "exoplanet" + ] }, { - "uid": "github/basehc/IPEV", - "url": "https://github.com/basehc/IPEV", - "rel": "/software/repository/github/basehc/IPEV", - "avatar": "https://avatars.githubusercontent.com/u/84138203?v=4", - "description": "Software tool to identify prokaryotic and eukaryotic virus-derived sequences in virome using deep learning. Used to calculate a set of scores that reflect the probability that input sequence fragments are prokaryotic and eukaryotic viral sequences.", + "uid": "github/sarrvesh/cuFFS", + "url": "https://github.com/sarrvesh/cuFFS", + "rel": "/software/repository/github/sarrvesh/cuFFS", + "avatar": "https://avatars.githubusercontent.com/u/8722194?v=4", + "description": "A GPU-accelerated Rotation Measure Synthesis code", "topics": [] }, { - "uid": "github/variomes/sibtm-variomes", - "url": "https://github.com/variomes/sibtm-variomes", - "rel": "/software/repository/github/variomes/sibtm-variomes", - "avatar": "https://avatars.githubusercontent.com/u/95295102?v=4", - "description": null, + "uid": "github/cgrudz/DataAssimilationBenchmarks.jl", + "url": "https://github.com/cgrudz/DataAssimilationBenchmarks.jl", + "rel": "/software/repository/github/cgrudz/DataAssimilationBenchmarks.jl", + "avatar": "https://avatars.githubusercontent.com/u/7243670?v=4", + "description": "Package Information and Documentation", "topics": [] }, { - "uid": "github/guaix-ucm/numina", - "url": "https://github.com/guaix-ucm/numina", - "rel": "/software/repository/github/guaix-ucm/numina", - "avatar": "https://avatars.githubusercontent.com/u/10961186?v=4", - "description": "Astronomical data reduction package", + "uid": "github/NathanSkene/MAGMA_Celltyping", + "url": "https://github.com/neurogenomics/MAGMA_Celltyping", + "rel": "/software/repository/github/NathanSkene/MAGMA_Celltyping", + "avatar": "https://avatars.githubusercontent.com/u/48588661?v=4", + "description": "Find causal cell-types underlying complex trait genetics", "topics": [ - "python", - "astronomy", - "science" + "gwas", + "genomics", + "single-cell-omics", + "magma" ] }, { - "uid": "github/guaix-ucm/megaradrp", - "url": "https://github.com/guaix-ucm/megaradrp", - "rel": "/software/repository/github/guaix-ucm/megaradrp", - "avatar": "https://avatars.githubusercontent.com/u/10961186?v=4", - "description": "MEGARA (Multi-Espectr\u00f3grafo en GTC de Alta Resoluci\u00f3n para Astronom\u00eda) is a facility instrument designed for the 10.4m GTC telescope in La Palma (Spain). ", + "uid": "github/NathanSkene/EWCE", + "url": "https://github.com/NathanSkene/EWCE", + "rel": "/software/repository/github/NathanSkene/EWCE", + "avatar": "https://avatars.githubusercontent.com/u/33265555?v=4", + "description": "Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.", "topics": [ - "astronomy", - "astrophysics" + "transcriptomics", + "single-cell", + "single-cell-rna-seq", + "deconvolution" ] }, { - "uid": "github/Dulab2020/ARMT", - "url": "https://github.com/Dulab2020/ARMT", - "rel": "/software/repository/github/Dulab2020/ARMT", - "avatar": "https://avatars.githubusercontent.com/u/76273687?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/highamm/sptotal", - "url": "https://github.com/highamm/sptotal", - "rel": "/software/repository/github/highamm/sptotal", - "avatar": "https://avatars.githubusercontent.com/u/34220951?v=4", - "description": "Package for Fitting Spatial Linear Models and Predicting Total Abundances for Finite Populations", + "uid": "github/ycwu1030/EvoEMD", + "url": "https://github.com/ycwu1030/EvoEMD", + "rel": "/software/repository/github/ycwu1030/EvoEMD", + "avatar": "https://avatars.githubusercontent.com/u/39174521?v=4", + "description": "Evolution with an Early Matter-Dominated era", "topics": [] }, { - "uid": "github/ijuric/MAPS", - "url": "https://github.com/ijuric/MAPS", - "rel": "/software/repository/github/ijuric/MAPS", - "avatar": "https://avatars.githubusercontent.com/u/11790693?v=4", - "description": "MAPS (Model-based Analysis of PLAC-Seq data) pipeline is a a set of multiple scripts used to analyze PLAC-Seq and HiChIP data.", + "uid": "github/LeonSong1995/gsMap", + "url": "https://github.com/LeonSong1995/gsMap", + "rel": "/software/repository/github/LeonSong1995/gsMap", + "avatar": "https://avatars.githubusercontent.com/u/49676857?v=4", + "description": "gsMap (genetically informed spatial mapping of cells for complex traits) integrates spatial transcriptomics (ST) data with genome-wide association study (GWAS) summary statistics to map cells to human complex traits, including diseases, in a spatially resolved manner.", "topics": [] }, { - "uid": "github/palaeoware/trevosim", - "url": "https://github.com/palaeoware/trevosim", - "rel": "/software/repository/github/palaeoware/trevosim", - "avatar": "https://avatars.githubusercontent.com/u/38782482?v=4", - "description": "TREvoSim - The [Tr]ee [Evo]lutionary [Sim]ulator program", + "uid": "github/nlesc-ave/ave-rest-service", + "url": "https://github.com/nlesc-ave/ave-rest-service", + "rel": "/software/repository/github/nlesc-ave/ave-rest-service", + "avatar": "https://avatars0.githubusercontent.com/u/15281028?v=4", + "description": "visualize (clustered) single-nucleotide variants across genomes", "topics": [] }, { - "uid": "github/palaeoware/revosim", - "url": "https://github.com/palaeoware/revosim", - "rel": "/software/repository/github/palaeoware/revosim", - "avatar": "https://avatars.githubusercontent.com/u/38782482?v=4", - "description": "REvoSim - The [R]apid [Evo]lutionary [Sim]ulator - An individual-based evolutionary model", + "uid": "github/katholt/Kleborate", + "url": "https://github.com/katholt/Kleborate", + "rel": "/software/repository/github/katholt/Kleborate", + "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", + "description": "tool to screen Klebsiella genome assemblies", "topics": [] }, { - "uid": "github/AncientNLP/potnia", - "url": "https://github.com/AncientNLP/potnia", - "rel": "/software/repository/github/AncientNLP/potnia", - "avatar": "https://avatars.githubusercontent.com/u/159224666?v=4", - "description": "Potnia is an open-source Python library designed to convert Romanized transliterations of ancient texts into Unicode representations of their respective native scripts.", + "uid": "github/katholt/Kaptive", + "url": "https://github.com/katholt/Kaptive", + "rel": "/software/repository/github/katholt/Kaptive", + "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", + "description": "obtain information about K and O types for Klebsiella genome assemblies", "topics": [] }, { - "uid": "github/fast-data-transfer/fdt", - "url": "https://github.com/fast-data-transfer/fdt", - "rel": "/software/repository/github/fast-data-transfer/fdt", - "avatar": "https://avatars.githubusercontent.com/u/30577958?v=4", - "description": "FDT is an Application for Efficient Data Transfers which is capable of reading and writing at disk speed over wide area networks (with standard TCP). It is written in Java, runs an all major platforms and it is easy to use. FDT is based on an asynchronous, flexible multithreaded system and is using the capabilities of the Java NIO libraries.", + "uid": "github/katholt/srst2", + "url": "https://github.com/katholt/srst2", + "rel": "/software/repository/github/katholt/srst2", + "avatar": "https://avatars.githubusercontent.com/u/832158?v=4", + "description": "Short Read Sequence Typing for Bacterial Pathogens", "topics": [] }, { - "uid": "github/wrenfold/wrenfold", - "url": "https://github.com/wrenfold/wrenfold", - "rel": "/software/repository/github/wrenfold/wrenfold", - "avatar": "https://avatars.githubusercontent.com/u/167943873?v=4", - "description": "Toolkit for generating code from symbolic math expressions.", + "uid": "github/morrowcj/remotePARTS", + "url": "https://github.com/morrowcj/remotePARTS", + "rel": "/software/repository/github/morrowcj/remotePARTS", + "avatar": "https://avatars.githubusercontent.com/u/25436787?v=4", + "description": "remotePARTS is a set of tools for running Partitioned spatio-temporal auto regression analyses on remotely-sensed data sets. ", "topics": [ - "code-generation", - "computer-vision", - "mathematics", - "robotics", - "symbolic-math" + "remote-sensing-in-r", + "statistical-analysis", + "big-data", + "autocorrelation" ] }, { - "uid": "github/extendr/extendr", - "url": "https://github.com/extendr/extendr", - "rel": "/software/repository/github/extendr/extendr", - "avatar": "https://avatars.githubusercontent.com/u/63346977?v=4", - "description": "R extension library for rust designed to be familiar to R users.", + "uid": "github/snijderlab/stitch", + "url": "https://github.com/snijderlab/stitch", + "rel": "/software/repository/github/snijderlab/stitch", + "avatar": "https://avatars.githubusercontent.com/u/95350222?v=4", + "description": "Template-based assembly of proteomics short reads for de novo antibody sequencing and repertoire profiling", "topics": [ - "rust", - "r", - "extension", - "api-wrapper", - "ffi-bindings" + "mass-spectrometry", + "antibody", + "sequencing" ] }, { - "uid": "github/Pithikos/C-Thread-Pool", - "url": "https://github.com/Pithikos/C-Thread-Pool", - "rel": "/software/repository/github/Pithikos/C-Thread-Pool", - "avatar": "https://avatars.githubusercontent.com/u/400048?v=4", - "description": "A minimal but powerful thread pool in ANSI C", + "uid": "github/t00shadow/CryoDataBot", + "url": "https://github.com/t00shadow/CryoDataBot", + "rel": "/software/repository/github/t00shadow/CryoDataBot", + "avatar": "https://avatars.githubusercontent.com/u/111927716?v=4", + "description": "A Robust Pipeline for Curating High-Quality CryoEM Datasets for AI-Driven Structural Biology", "topics": [] }, { - "uid": "github/climate-machine/Oceananigans.jl", - "url": "https://github.com/CliMA/Oceananigans.jl", - "rel": "/software/repository/github/climate-machine/Oceananigans.jl", - "avatar": "https://avatars0.githubusercontent.com/u/43161188?v=4", - "description": "\ud83c\udf0a Fast and friendly fluid dynamics on CPUs and GPUs", - "topics": [ - "climate", - "ocean", - "fluid-dynamics", - "julia", - "gpu", - "climate-change" - ] + "uid": "github/rkiman/wdwarfdate", + "url": "https://github.com/rkiman/wdwarfdate", + "rel": "/software/repository/github/rkiman/wdwarfdate", + "avatar": "https://avatars.githubusercontent.com/u/18469579?v=4", + "description": "Calculate white dwarfs ages from effective temperature and surface gravity.", + "topics": [] }, { - "uid": "github/gmrandazzo/libscientific", - "url": "https://github.com/gmrandazzo/libscientific", - "rel": "/software/repository/github/gmrandazzo/libscientific", - "avatar": "https://avatars.githubusercontent.com/u/3600735?v=4", - "description": "Libscientific is a C framework for multivariate and other statistical analysis", + "uid": "github/igmhub/ForestFlow", + "url": "https://github.com/igmhub/ForestFlow", + "rel": "/software/repository/github/igmhub/ForestFlow", + "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", + "description": "This code is a neural network emulator for the 3D flux power spectrum of the Lyman-alpha forest", "topics": [] }, { - "uid": "github/TeraTrees/TIPP", - "url": "https://github.com/TeraTrees/TIPP", - "rel": "/software/repository/github/TeraTrees/TIPP", - "avatar": "https://avatars.githubusercontent.com/u/78455348?v=4", - "description": "tool for Taxonomic Identification and Phylogenetic Profiling", + "uid": "github/igmhub/LyaCoLoRe", + "url": "https://github.com/igmhub/LyaCoLoRe", + "rel": "/software/repository/github/igmhub/LyaCoLoRe", + "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", + "description": "Code development to use CoLoRe simulations for generating simulated Lyman alpha forest spectra", "topics": [] }, { - "uid": "github/aspuru-guzik-group/funsies", - "url": "https://github.com/aspuru-guzik-group/funsies", - "rel": "/software/repository/github/aspuru-guzik-group/funsies", - "avatar": "https://avatars.githubusercontent.com/u/29867355?v=4", - "description": "funsies is a lightweight workflow engine \ud83d\udd27", + "uid": "github/igmhub/baofit", + "url": "https://github.com/igmhub/baofit", + "rel": "/software/repository/github/igmhub/baofit", + "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", + "description": "Fits cosmological data to measure baryon acoustic oscillations.", "topics": [ - "workflow-engine", - "python", - "infrastructure", - "automation", - "data-ops", - "data-engineering", - "redis", - "hashtree" + "c-plus-plus", + "astronomy" ] }, { - "uid": "github/soilwater/crnpy", - "url": "https://github.com/soilwater/crnpy", - "rel": "/software/repository/github/soilwater/crnpy", - "avatar": "https://avatars.githubusercontent.com/u/73772799?v=4", - "description": "A Python toolbox for handling common tasks with cosmic-ray neutron probes", + "uid": "github/igmhub/picca", + "url": "https://github.com/igmhub/picca", + "rel": "/software/repository/github/igmhub/picca", + "avatar": "https://avatars.githubusercontent.com/u/24413275?v=4", + "description": "set of tools for continuum fitting, correlation function calculation, cosmological fits...", "topics": [ - "cosmic-rays", - "cosmos", - "neutron-detection", - "python", - "soil-moisture", - "crnp" + "cosmology", + "astrophysics", + "bao", + "lyman-alpha" ] }, { - "uid": "github/johentsch/ms3", - "url": "https://github.com/johentsch/ms3", - "rel": "/software/repository/github/johentsch/ms3", - "avatar": "https://avatars.githubusercontent.com/u/42718519?v=4", - "description": "A parser for annotated MuseScore 3 files.", - "topics": [ - "corpus", - "corpus-data", - "corpus-generator", - "corpus-processing", - "corpus-tools", - "musescore", - "musescore2", - "musescore3", - "musescore4", - "music-score", - "music-scores", - "parser", - "sheet-music", - "sheet-music-parser", - "tsv", - "tsv-files", - "tsv-format", - "xml-parser", - "xml-parser-library", - "xml-parsing" - ] + "uid": "github/geodynamics/burnman", + "url": "https://github.com/geodynamics/burnman", + "rel": "/software/repository/github/geodynamics/burnman", + "avatar": "https://avatars.githubusercontent.com/u/4052461?v=4", + "description": "BurnMan is a library for modeling mantle thermodynamics and thermoelasticity constrained by mineral physics experiments.", + "topics": [] }, { - "uid": "github/guangtunbenzhu/NonnegMFPy", - "url": "https://github.com/guangtunbenzhu/NonnegMFPy", - "rel": "/software/repository/github/guangtunbenzhu/NonnegMFPy", - "avatar": "https://avatars.githubusercontent.com/u/1619909?v=4", - "description": "Vectorized Nonnegative Matrix Factorization with heteroscedastic uncertainties and missing data", + "uid": "github/geodynamics/Rayleigh", + "url": "https://github.com/geodynamics/Rayleigh", + "rel": "/software/repository/github/geodynamics/Rayleigh", + "avatar": "https://avatars.githubusercontent.com/u/4052461?v=4", + "description": "Rayleigh: Pseudo-spectral MHD", "topics": [] }, { - "uid": "github/guangtunbenzhu/SetCoverPy", - "url": "https://github.com/guangtunbenzhu/SetCoverPy", - "rel": "/software/repository/github/guangtunbenzhu/SetCoverPy", - "avatar": "https://avatars.githubusercontent.com/u/1619909?v=4", - "description": "A heuristic solver for the set cover problem", + "uid": "github/FINNGEN/lavaa-react", + "url": "https://github.com/FINNGEN/lavaa-react", + "rel": "/software/repository/github/FINNGEN/lavaa-react", + "avatar": "https://avatars.githubusercontent.com/u/33527341?v=4", + "description": "lavaa-react", "topics": [] }, { - "uid": "github/fermisurfaces/IFermi", - "url": "https://github.com/fermisurfaces/IFermi", - "rel": "/software/repository/github/fermisurfaces/IFermi", - "avatar": "https://avatars.githubusercontent.com/u/78813965?v=4", - "description": "Fermi surface generation, analysis and visualisation.", + "uid": "github/cmelab/flowerMD", + "url": "https://github.com/cmelab/flowerMD", + "rel": "/software/repository/github/cmelab/flowerMD", + "avatar": "https://avatars.githubusercontent.com/u/44783842?v=4", + "description": "Flexible Library of Organic Workflows and Extensible Recipes for Molecular Dynamics.", "topics": [ - "fermi-surface", - "fermi-slice", - "vasp" + "hoomd-blue", + "molecular-dynamics", + "molecular-dynamics-simulation", + "mosdef-hub", + "polymer", + "simulation" ] }, { - "uid": "github/valerio-marra/CalPriorSNIa", - "url": "https://github.com/valerio-marra/CalPriorSNIa", - "rel": "/software/repository/github/valerio-marra/CalPriorSNIa", - "avatar": "https://avatars.githubusercontent.com/u/28807598?v=4", - "description": "Effective calibration prior on the absolute magnitude of Type Ia supernovae", + "uid": "github/deeptools/deepTools", + "url": "https://github.com/deeptools/deepTools", + "rel": "/software/repository/github/deeptools/deepTools", + "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", + "description": "a suite of python tools particularly developed for the efficient analysis of high-throughput sequencing data, such as ChIP-seq, RNA-seq or MNase-seq. deepTools contains useful modules to process the mapped reads data for multiple quality checks, creating normalized coverage files in standard bedGraph and bigWig file formats, that allow comparison between different files (for example, treatment and control). Finally, using such normalized and standardized files, \u2026", "topics": [ - "supernovae", - "cosmology", - "wolfram-mathematica" + "python", + "bioinformatics", + "genomics", + "ngs", + "rna-seq", + "chip-seq" ] }, { - "uid": "github/mdtanker/polartoolkit", - "url": "https://github.com/mdtanker/polartoolkit", - "rel": "/software/repository/github/mdtanker/polartoolkit", - "avatar": "https://avatars.githubusercontent.com/u/81199856?v=4", - "description": "Helpful tools for polar researchers", + "uid": "github/deeptools/deeptools_intervals", + "url": "https://github.com/deeptools/deeptools_intervals", + "rel": "/software/repository/github/deeptools/deeptools_intervals", + "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", + "description": "A python library for constructing interval trees with associated exon/annotation information", "topics": [ - "antarctica", - "bedmachine", - "pygmt", - "jupyter-notebook", - "bedmap", - "plotting", - "gmt", - "python", - "profiles", - "arctic", - "cryosphere", - "greenland", - "polar" + "bioinformatics", + "interval-tree", + "gtf", + "bed" ] }, { - "uid": "github/nayu0419/stMMR", - "url": "https://github.com/nayu0419/stMMR", - "rel": "/software/repository/github/nayu0419/stMMR", - "avatar": "https://avatars.githubusercontent.com/u/49137187?v=4", - "description": "stMMR", - "topics": [] + "uid": "github/deeptools/HiCExplorer", + "url": "https://github.com/deeptools/HiCExplorer", + "rel": "/software/repository/github/deeptools/HiCExplorer", + "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", + "description": "HiCExplorer is a powerful and easy to use set of tools to process, normalize and visualize Hi-C data.", + "topics": [ + "hic", + "genomics", + "chromosome-conformation-capture", + "galaxy", + "python", + "bioinformatics" + ] }, { - "uid": "github/Nico-Curti/rFBP", - "url": "https://github.com/Nico-Curti/rFBP", - "rel": "/software/repository/github/Nico-Curti/rFBP", - "avatar": "https://avatars2.githubusercontent.com/u/24650975?v=4", - "description": "Replicated Focusing Belief Propagation algorithm", + "uid": "github/deeptools/py2bit", + "url": "https://github.com/deeptools/py2bit", + "rel": "/software/repository/github/deeptools/py2bit", + "avatar": "https://avatars.githubusercontent.com/u/6528975?v=4", + "description": "A python library for accessing 2bit files", "topics": [ - "belief-propagation", - "deep-neural-networks", - "spin-glass", - "statistical-mechanics", - "learning-algorithm", - "machine-learning-algorithms", - "python3", - "cpp17" + "twobit", + "bioinformatics" ] }, { - "uid": "github/leishenggit/CircleBase", - "url": "https://github.com/leishenggit/CircleBase", - "rel": "/software/repository/github/leishenggit/CircleBase", - "avatar": "https://avatars.githubusercontent.com/u/11373459?v=4", - "description": "An integrated resource and analysis platform for human eccDNAs", + "uid": "github/ElucidataInc/ElMaven", + "url": "https://github.com/ElucidataInc/ElMaven", + "rel": "/software/repository/github/ElucidataInc/ElMaven", + "avatar": "https://avatars.githubusercontent.com/u/22674262?v=4", + "description": "LC-MS data processing tool for large-scale metabolomics experiments.", "topics": [ - "eccdna", - "function-regulation", - "pagerank" + "metabolomics", + "mass-spectrometry", + "lc-ms", + "qt", + "c-plus-plus", + "lc-msms" ] }, { - "uid": "github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", - "url": "https://github.com/baxmittens/OpenGeoSysUncertaintyQuantification.jl", - "rel": "/software/repository/github/baxmittens/OpenGeoSysUncertaintyQuantification.jl", - "avatar": "https://avatars.githubusercontent.com/u/100423479?v=4", - "description": "An uncertainty quantification toolbox for OpenGeoSys 6", + "uid": "github/captain-exoplanet/misttborn", + "url": "https://github.com/captain-exoplanet/misttborn", + "rel": "/software/repository/github/captain-exoplanet/misttborn", + "avatar": "https://avatars.githubusercontent.com/u/45567063?v=4", + "description": "MISTTBORN exoplanet fitting code, and various associated codes", "topics": [] }, { - "uid": "github/baxmittens/VTUFileHandler", - "url": "https://github.com/baxmittens/VTUFileHandler.jl", - "rel": "/software/repository/github/baxmittens/VTUFileHandler", - "avatar": "https://avatars.githubusercontent.com/u/100423479?v=4", - "description": "A VTU library in the Julia language that implements an algebra for basic mathematical operations on VTU data.", + "uid": "github/LucIJspeert/star_shadow", + "url": "https://github.com/LucIJspeert/star_shadow", + "rel": "/software/repository/github/LucIJspeert/star_shadow", + "avatar": "https://avatars.githubusercontent.com/u/46969344?v=4", + "description": "Recipe to fully automatically analyse eclipsing binary light curves and find eccentricity and more", "topics": [] }, { - "uid": "github/nutjunkie/IQmol", - "url": "https://github.com/nutjunkie/IQmol", - "rel": "/software/repository/github/nutjunkie/IQmol", - "avatar": "https://avatars.githubusercontent.com/u/2628598?v=4", - "description": "IQmol is an open source molecular editor and visualization package", + "uid": "github/LucIJspeert/eclipsr", + "url": "https://github.com/LucIJspeert/eclipsr", + "rel": "/software/repository/github/LucIJspeert/eclipsr", + "avatar": "https://avatars.githubusercontent.com/u/46969344?v=4", + "description": "Recipe to fully automatically find individual eclipses in light curves, determine ephemerides and more", + "topics": [] + }, + { + "uid": "github/mengyao/Complete-Striped-Smith-Waterman-Library", + "url": "https://github.com/mengyao/Complete-Striped-Smith-Waterman-Library", + "rel": "/software/repository/github/mengyao/Complete-Striped-Smith-Waterman-Library", + "avatar": "https://avatars.githubusercontent.com/u/611700?v=4", + "description": "Smith-Waterman aligner based on libssw", + "topics": [] + }, + { + "uid": "github/EnergyModelsX/EnergyModelsBase.jl", + "url": "https://github.com/EnergyModelsX/EnergyModelsBase.jl", + "rel": "/software/repository/github/EnergyModelsX/EnergyModelsBase.jl", + "avatar": "https://avatars.githubusercontent.com/u/138767365?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/mastodon-sc/mastodon-deep-lineage", + "url": "https://github.com/mastodon-sc/mastodon-deep-lineage", + "rel": "/software/repository/github/mastodon-sc/mastodon-deep-lineage", + "avatar": "https://avatars.githubusercontent.com/u/60662108?v=4", + "description": "A collection of plugins to analyse lineages of tracked objects in Mastodon", + "topics": [] + }, + { + "uid": "github/asalda/FiCUS", + "url": "https://github.com/asalda/FiCUS", + "rel": "/software/repository/github/asalda/FiCUS", + "avatar": "https://avatars.githubusercontent.com/u/89804075?v=4", + "description": "FItting the stellar Continuum of Uv Spectra (FiCUS)", + "topics": [] + }, + { + "uid": "github/he2016012996/CABnet", + "url": "https://github.com/he2016012996/CABnet", + "rel": "/software/repository/github/he2016012996/CABnet", + "avatar": "https://avatars.githubusercontent.com/u/47880931?v=4", + "description": null, "topics": [] }, { - "uid": "github/jgrembi/riskCommunicator", - "url": "https://github.com/jgrembi/riskCommunicator", - "rel": "/software/repository/github/jgrembi/riskCommunicator", - "avatar": "https://avatars.githubusercontent.com/u/7432315?v=4", - "description": "An R package for estimating risk differences and relative risk measures", + "uid": "github/gromacs/gromacs", + "url": "https://github.com/gromacs/gromacs", + "rel": "/software/repository/github/gromacs/gromacs", + "avatar": "https://avatars.githubusercontent.com/u/92540?v=4", + "description": "Public/backup repository of the GROMACS molecular simulation toolkit. Please do not mine the metadata blindly; we use https://gitlab.com/gromacs/gromacs for code review and issue tracking.", "topics": [] }, { - "uid": "github/CIRADA-Tools/RM-Tools", - "url": "https://github.com/CIRADA-Tools/RM-Tools", - "rel": "/software/repository/github/CIRADA-Tools/RM-Tools", - "avatar": "https://avatars.githubusercontent.com/u/49538616?v=4", - "description": "RM-synthesis, RM-clean and QU-fitting on polarised radio spectra", + "uid": "github/philres/catfishq", + "url": "https://github.com/philres/catfishq", + "rel": "/software/repository/github/philres/catfishq", + "avatar": "https://avatars.githubusercontent.com/u/2323996?v=4", + "description": "Cat FASTQ files", "topics": [] }, { - "uid": "github/zhanglabtools/CASAVA", - "url": "https://github.com/zhanglabtools/CASAVA", - "rel": "/software/repository/github/zhanglabtools/CASAVA", - "avatar": "https://avatars.githubusercontent.com/u/37131175?v=4", - "description": "Resources of our paper CASAVA", - "topics": [] + "uid": "github/philres/ngmlr", + "url": "https://github.com/philres/ngmlr", + "rel": "/software/repository/github/philres/ngmlr", + "avatar": "https://avatars.githubusercontent.com/u/2323996?v=4", + "description": "NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations", + "topics": [ + "next-generation-sequencing", + "pacbio", + "oxford-nanopore", + "mapper", + "structural-variations", + "long-read", + "alignment", + "bioconda", + "docker" + ] }, { - "uid": "github/bradkav/EarthScatterLikelihood", - "url": "https://github.com/bradkav/EarthScatterLikelihood", - "rel": "/software/repository/github/bradkav/EarthScatterLikelihood", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Code for calculating event rates and likelihoods for Dark Matter direct detection experiments in the presence of Earth-Scattering", + "uid": "github/reedacartwright/ngila", + "url": "https://github.com/reedacartwright/ngila", + "rel": "/software/repository/github/reedacartwright/ngila", + "avatar": "https://avatars.githubusercontent.com/u/101918?v=4", + "description": "Ngila is a global alignment program that can align pairs of sequences using logarithmic and affine gap penalties.", "topics": [] }, { - "uid": "github/bradkav/WIMpy_NREFT", - "url": "https://github.com/bradkav/WIMpy_NREFT", - "rel": "/software/repository/github/bradkav/WIMpy_NREFT", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "WIMpy_NREFT is a code for calculating Dark Matter direct detection rates in the framework of non-relativistic effective field theory (NREFT).", + "uid": "github/reedacartwright/dawg", + "url": "https://github.com/reedacartwright/dawg", + "rel": "/software/repository/github/reedacartwright/dawg", + "avatar": "https://avatars.githubusercontent.com/u/101918?v=4", + "description": "Simulating Sequence Evolution", "topics": [] }, { - "uid": "github/bradkav/verne", - "url": "https://github.com/bradkav/verne", - "rel": "/software/repository/github/bradkav/verne", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Python code for calculating the Earth-stopping effect for super-heavy Dark Matter (DM).", + "uid": "github/marccanby/linguiphyr", + "url": "https://github.com/marccanby/linguiphyr", + "rel": "/software/repository/github/marccanby/linguiphyr", + "avatar": "https://avatars.githubusercontent.com/u/12547184?v=4", + "description": "Linguistic Phylogenetic Analysis in R", "topics": [] }, { - "uid": "github/bradkav/runDM", - "url": "https://github.com/bradkav/runDM", - "rel": "/software/repository/github/bradkav/runDM", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "A tool (in Mathematica and Python) for calculating the running of the couplings of Dark Matter (DM) to the Standard Model (SM) in simplified models with vector mediators.", - "topics": [] + "uid": "github/lgrcia/nuance", + "url": "https://github.com/lgrcia/nuance", + "rel": "/software/repository/github/lgrcia/nuance", + "avatar": "https://avatars.githubusercontent.com/u/20612771?v=4", + "description": "Efficient detection of planets transiting quiet or active stars", + "topics": [ + "correlated-noise", + "data-analysis", + "exoplanets", + "search", + "systematics", + "transits", + "variability" + ] }, { - "uid": "github/bradkav/AntiparticleDM", - "url": "https://github.com/bradkav/AntiparticleDM", - "rel": "/software/repository/github/bradkav/AntiparticleDM", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Prospects for discriminating between Majorana and Dirac Dark Matter using future direct detection data. ", + "uid": "github/lgrcia/prose", + "url": "https://github.com/lgrcia/prose", + "rel": "/software/repository/github/lgrcia/prose", + "avatar": "https://avatars.githubusercontent.com/u/20612771?v=4", + "description": "A python framework to process FITS images. Built for Astronomy.", "topics": [ - "dark-matter", - "physics", - "particle-physics" + "python", + "astronomy", + "photometry", + "pipeline" ] }, { - "uid": "github/bradkav/DMRadon", - "url": "https://github.com/bradkav/DMRadon", - "rel": "/software/repository/github/bradkav/DMRadon", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Tools for calculating the Radon Transform, for use in the analysis of Directional Dark Matter Direct Detection", + "uid": "github/gururajw/superlite", + "url": "https://github.com/gururajw/superlite", + "rel": "/software/repository/github/gururajw/superlite", + "avatar": "https://avatars.githubusercontent.com/u/33475990?v=4", + "description": "SuperLite: IMC-DDMC Radiation Transport Code for Interacting Transients", "topics": [] }, { - "uid": "github/bradkav/NbodyIMRI", - "url": "https://github.com/bradkav/NbodyIMRI", - "rel": "/software/repository/github/bradkav/NbodyIMRI", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "N-body solver in python, tailored to intermediate-mass ratio inspirals of black holes and dark matter spikes", + "uid": "github/ExoArcturus/TriArc", + "url": "https://github.com/ExoArcturus/TriArc", + "rel": "/software/repository/github/ExoArcturus/TriArc", + "avatar": "https://avatars.githubusercontent.com/u/108469924?v=4", + "description": "(reTRIeval ARCturus) Bayesian atmospheric retrieval for assessing detectability of trace gases in exoplanet atmospheres.", "topics": [] }, { - "uid": "github/bradkav/EarthShadow", - "url": "https://github.com/bradkav/EarthShadow", - "rel": "/software/repository/github/bradkav/EarthShadow", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "A tool for calculating the impact of Earth-scattering on the distribution of Dark Matter (DM) particles. Includes (Mathematica) code, numerical results, plots and animations.", - "topics": [] + "uid": "github/DarkQuestCosmology/dark_emulator_public", + "url": "https://github.com/DarkQuestCosmology/dark_emulator_public", + "rel": "/software/repository/github/DarkQuestCosmology/dark_emulator_public", + "avatar": "https://avatars.githubusercontent.com/u/63082669?v=4", + "description": "A cosmological tool for emulation of various basic statistics of dark matter haloes based on Dark Quest project (https://darkquestcosmology.github.io/).", + "topics": [ + "emulators", + "cosmology" + ] }, { - "uid": "github/bradkav/BlackHolesDarkDress", - "url": "https://github.com/bradkav/BlackHolesDarkDress", - "rel": "/software/repository/github/bradkav/BlackHolesDarkDress", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Code for studying primordial black hole (PBH) binaries, clothed in dark matter (DM) halos, associated with the paper \"Black Holes' Dark Dress: On the merger rate of a subdominant population of primordial black holes\".", + "uid": "github/synthpop-galaxy/synthpop", + "url": "https://github.com/synthpop-galaxy/synthpop", + "rel": "/software/repository/github/synthpop-galaxy/synthpop", + "avatar": "https://avatars.githubusercontent.com/u/127166316?v=4", + "description": "A modular Galactic population synthesis code", "topics": [] }, { - "uid": "github/bradkav/CEvNS", - "url": "https://github.com/bradkav/CEvNS", - "rel": "/software/repository/github/bradkav/CEvNS", - "avatar": "https://avatars.githubusercontent.com/u/5381472?v=4", - "description": "Code for calculating Coherent Elastic Neutrino-Nucleus Scattering (CEvNS) cross sections and recoil spectra. Also includes code for obtaining New Physics constraints from the COHERENT-2017 results.", + "uid": "github/eead-csic-compbio/get_homologues", + "url": "https://github.com/eead-csic-compbio/get_homologues", + "rel": "/software/repository/github/eead-csic-compbio/get_homologues", + "avatar": "https://avatars.githubusercontent.com/u/15164836?v=4", + "description": "GET_HOMOLOGUES: a versatile software package for pan-genome analysis", "topics": [ - "cross-sections", - "neutrinos", - "physics" + "pangenome", + "bacteria", + "annotation", + "plants", + "transcriptome", + "clustering", + "fasta", + "genbank", + "pangene" ] }, { - "uid": "github/londumas/redvsblue", - "url": "https://github.com/londumas/redvsblue", - "rel": "/software/repository/github/londumas/redvsblue", - "avatar": "https://avatars.githubusercontent.com/u/3166436?v=4", - "description": "Quasar and emission line precise redshift fitting from prior", - "topics": [ - "redshift", - "pca-redshift", - "chi2", - "pixel", - "galaxy", - "quasar" - ] + "uid": "github/Bgi-LUSH/GPMeta", + "url": "https://github.com/Bgi-LUSH/GPMeta", + "rel": "/software/repository/github/Bgi-LUSH/GPMeta", + "avatar": "https://avatars.githubusercontent.com/u/113886096?v=4", + "description": "A GPU-accelerated method for ultrarapid pathogen identification from metagenomic sequences.", + "topics": [] }, { - "uid": "github/csuhjhjhj/GCNCMI", - "url": "https://github.com/csuhjhjhj/GCNCMI", - "rel": "/software/repository/github/csuhjhjhj/GCNCMI", - "avatar": "https://avatars.githubusercontent.com/u/63285288?v=4", - "description": "CircRNA-miRNA interaction Prediction Based on Graph Neural Network", + "uid": "github/FergusDonnan/PyROA", + "url": "https://github.com/FergusDonnan/PyROA", + "rel": "/software/repository/github/FergusDonnan/PyROA", + "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", + "description": null, "topics": [] }, { - "uid": "github/ZhaoXM-Lab/metaMIC", - "url": "https://github.com/ZhaoXM-Lab/metaMIC", - "rel": "/software/repository/github/ZhaoXM-Lab/metaMIC", - "avatar": "https://avatars.githubusercontent.com/u/85596707?v=4", - "description": "Assessing and Improving the quality of metagenomic assemblies", + "uid": "github/FergusDonnan/Running-Optimal-Average", + "url": "https://github.com/FergusDonnan/Running-Optimal-Average", + "rel": "/software/repository/github/FergusDonnan/Running-Optimal-Average", + "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", + "description": null, "topics": [] }, { - "uid": "github/ankilab/EvoVis", - "url": "https://github.com/ankilab/EvoVis", - "rel": "/software/repository/github/ankilab/EvoVis", - "avatar": "https://avatars.githubusercontent.com/u/94447681?v=4", + "uid": "github/FergusDonnan/PAHDecomp", + "url": "https://github.com/FergusDonnan/PAHDecomp", + "rel": "/software/repository/github/FergusDonnan/PAHDecomp", + "avatar": "https://avatars.githubusercontent.com/u/80899217?v=4", "description": null, "topics": [] }, { - "uid": "github/fabiorigamonti/bang", - "url": "https://github.com/FabioRigamonti/BANG", - "rel": "/software/repository/github/fabiorigamonti/bang", - "avatar": "https://avatars.githubusercontent.com/u/65313023?v=4", - "description": "GPU/CPU optimized software for morpho-kinematic galaxy parameter estimation.", + "uid": "github/mithun218/GiNaCDE", + "url": "https://github.com/mithun218/GiNaCDE", + "rel": "/software/repository/github/mithun218/GiNaCDE", + "avatar": "https://avatars.githubusercontent.com/u/9692622?v=4", + "description": "GiNaC Differential Equation Solver", "topics": [] }, { - "uid": "github/aksholokhov/pysr3", - "url": "https://github.com/aksholokhov/pysr3", - "rel": "/software/repository/github/aksholokhov/pysr3", - "avatar": "https://avatars.githubusercontent.com/u/6594476?v=4", - "description": "SciKit-Learn compatible library for training mixed-effects models.", + "uid": "github/eblur/dust", + "url": "https://github.com/eblur/dust", + "rel": "/software/repository/github/eblur/dust", + "avatar": "https://avatars.githubusercontent.com/u/2516513?v=4", + "description": "For calculating dust scattering and extinction", "topics": [] }, { - "uid": "github/pjcigan/obsplanning", - "url": "https://github.com/pjcigan/obsplanning", - "rel": "/software/repository/github/pjcigan/obsplanning", - "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", - "description": "Python tools for planning astronomical observations", + "uid": "github/djbard/ccogs", + "url": "https://github.com/djbard/ccogs", + "rel": "/software/repository/github/djbard/ccogs", + "avatar": "https://avatars.githubusercontent.com/u/1790559?v=4", + "description": "Cosmological Calculations on GPUS. A collection of code used to perform calculations use in Cosmology studies and written for GPUs. ", "topics": [] }, { - "uid": "github/pjcigan/pysymlog", - "url": "https://github.com/pjcigan/pysymlog", - "rel": "/software/repository/github/pjcigan/pysymlog", - "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", - "description": "Utilities for plotting in matplotlib, plotly, etc. using a symmetric or signed log transform. This allows the plotting of positive and negative data with a pseudo-log axis scale or stretch. ", - "topics": [] + "uid": "github/Siegel-Lab/BioSmoother", + "url": "https://github.com/Siegel-Lab/BioSmoother", + "rel": "/software/repository/github/Siegel-Lab/BioSmoother", + "avatar": "https://avatars.githubusercontent.com/u/124569893?v=4", + "description": "On-the-fly processing and visualization of interactome data", + "topics": [ + "bioinformatics", + "data-visualization", + "hi-c", + "interactome-sequencing", + "radicl-seq", + "grid-seq" + ] }, { - "uid": "github/pjcigan/multicolorfits", - "url": "https://github.com/pjcigan/multicolorfits", - "rel": "/software/repository/github/pjcigan/multicolorfits", - "avatar": "https://avatars.githubusercontent.com/u/3515885?v=4", - "description": "Python tool for colorizing and combining fits images.", + "uid": "github/ctian282/DeepSSM", + "url": "https://github.com/ctian282/DeepSSM", + "rel": "/software/repository/github/ctian282/DeepSSM", + "avatar": "https://avatars.githubusercontent.com/u/11705333?v=4", + "description": "A Neural Network based emulator for GW spectrum from cosmological FOPTs", "topics": [] }, { - "uid": "github/Genentech/SPEX", - "url": "https://github.com/Genentech/spex", - "rel": "/software/repository/github/Genentech/SPEX", - "avatar": "https://avatars.githubusercontent.com/u/3913764?v=4", + "uid": "github/Shamir-Lab/domino_web", + "url": "https://github.com/Shamir-Lab/domino_web", + "rel": "/software/repository/github/Shamir-Lab/domino_web", + "avatar": "https://avatars.githubusercontent.com/u/16764377?v=4", "description": null, "topics": [] }, { - "uid": "github/nick-youngblut/gtdb_to_taxdump", - "url": "https://github.com/nick-youngblut/gtdb_to_taxdump", - "rel": "/software/repository/github/nick-youngblut/gtdb_to_taxdump", - "avatar": "https://avatars.githubusercontent.com/u/2468572?v=4", - "description": "Convert GTDB taxonomy to NCBI taxdump format", + "uid": "github/UAMCAntwerpen/LEADD", + "url": "https://github.com/UAMCAntwerpen/LEADD", + "rel": "/software/repository/github/UAMCAntwerpen/LEADD", + "avatar": "https://avatars.githubusercontent.com/u/22612279?v=4", + "description": "Lamarckian Evolutionary Algorithm for de novo Drug Design", "topics": [] }, { - "uid": "github/gausspy/gausspy", - "url": "https://github.com/gausspy/gausspy", - "rel": "/software/repository/github/gausspy/gausspy", - "avatar": "https://avatars.githubusercontent.com/u/22684473?v=4", - "description": "GaussPy: Python tool for implementing Autonomous Gaussian Decomposition", + "uid": "github/grahambell/pymoc", + "url": "https://github.com/grahambell/pymoc", + "rel": "/software/repository/github/grahambell/pymoc", + "avatar": "https://avatars.githubusercontent.com/u/1649796?v=4", + "description": "Multi-Order Coverage map module for Python", + "topics": [] + }, + { + "uid": "github/TriPed-Robot/TriP", + "url": "https://github.com/TriPed-Robot/trip_kinematics", + "rel": "/software/repository/github/TriPed-Robot/TriP", + "avatar": "https://avatars.githubusercontent.com/u/69719827?v=4", + "description": "Python package for inverse kinematic calculations of hybrid serial parallel robots", "topics": [ - "hacktoberfest" + "python", + "robotics", + "kinematics", + "inverse-kinematics", + "kinematic-modeling", + "hybrid-chain", + "closed-chain", + "manipulator", + "trajectory-planning", + "parallel-robot", + "serial-robotics" ] }, { - "uid": "github/thejackal360/OpenPelt-Public", - "url": "https://github.com/thejackal360/OpenPelt-Public", - "rel": "/software/repository/github/thejackal360/OpenPelt-Public", - "avatar": "https://avatars.githubusercontent.com/u/85142351?v=4", - "description": null, + "uid": "github/bihealth/sodar_core", + "url": "https://github.com/bihealth/sodar_core", + "rel": "/software/repository/github/bihealth/sodar_core", + "avatar": "https://avatars1.githubusercontent.com/u/11364301?v=4", + "description": "Django-based framework for building scientific data management web apps.", "topics": [] }, { - "uid": "github/samconnolly/DELightcurveSimulation", - "url": "https://github.com/samconnolly/DELightcurveSimulation", - "rel": "/software/repository/github/samconnolly/DELightcurveSimulation", - "avatar": "https://avatars.githubusercontent.com/u/5765263?v=4", - "description": "Emmanoulopoulos style lightcurve simulation", + "uid": "github/simonsobs/mnms", + "url": "https://github.com/simonsobs/mnms", + "rel": "/software/repository/github/simonsobs/mnms", + "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", + "description": "Generate map-based noise models and noise simulations.", "topics": [] }, { - "uid": "github/mikolmogorov/Flye", - "url": "https://github.com/mikolmogorov/Flye", - "rel": "/software/repository/github/mikolmogorov/Flye", - "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", - "description": "De novo assembler for single molecule sequencing reads using repeat graphs", + "uid": "github/simonsobs/so_noise_models", + "url": "https://github.com/simonsobs/so_noise_models", + "rel": "/software/repository/github/simonsobs/so_noise_models", + "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", + "description": "Simons Observatory N(ell) noise models for public release", "topics": [] }, { - "uid": "github/MelanieKahl/MechAnalyze", - "url": "https://github.com/MelanieKahl/MechAnalyze", - "rel": "/software/repository/github/MelanieKahl/MechAnalyze", - "avatar": "https://avatars.githubusercontent.com/u/63041177?v=4", - "description": "an algorithm for standardization and automation of unconfined compression test analysis", - "topics": [] + "uid": "github/simonsobs/pixell", + "url": "https://github.com/simonsobs/pixell", + "rel": "/software/repository/github/simonsobs/pixell", + "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", + "description": "A rectangular pixel map manipulation and harmonic analysis library derived from Sigurd Naess' enlib.", + "topics": [ + "cosmology", + "image-processing", + "astrophysics" + ] }, { - "uid": "github/waynebhayes/SpArcFiRe", - "url": "https://github.com/waynebhayes/SpArcFiRe", - "rel": "/software/repository/github/waynebhayes/SpArcFiRe", - "avatar": "https://avatars.githubusercontent.com/u/20259980?v=4", - "description": "SPiral ARC FInder and REporter - find spiral arcs in galaxies.... or maybe hurricanes too?", + "uid": "github/simonsobs/hmvec", + "url": "https://github.com/simonsobs/hmvec", + "rel": "/software/repository/github/simonsobs/hmvec", + "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", + "description": "Vectorized halo model code written entirely in pure Python / numpy ", "topics": [] }, { - "uid": "github/canorve/GALFITools", - "url": "https://github.com/canorve/GALFITools", - "rel": "/software/repository/github/canorve/GALFITools", - "avatar": "https://avatars.githubusercontent.com/u/3579189?v=4", - "description": "A library for GALFIT", + "uid": "github/simonsobs/nemo", + "url": "https://github.com/simonsobs/nemo", + "rel": "/software/repository/github/simonsobs/nemo", + "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", + "description": "Millimeter-wave map filtering and Sunyaev-Zel'dovich galaxy cluster/source detection package. Originally developed for the Atacama Cosmology Telescope project.", "topics": [ - "python", - "python3" + "astrophysics", + "python" ] }, { - "uid": "github/canorve/EllipSect", - "url": "https://github.com/canorve/EllipSect", - "rel": "/software/repository/github/canorve/EllipSect", - "avatar": "https://avatars.githubusercontent.com/u/3579189?v=4", - "description": "An analysis tool for GALFIT output", - "topics": [ - "galfit", - "surface-brightness", - "galaxy" - ] + "uid": "github/Valdes-Tresanco-MS/NbThermo", + "url": "https://github.com/Valdes-Tresanco-MS/NbThermo", + "rel": "/software/repository/github/Valdes-Tresanco-MS/NbThermo", + "avatar": "https://avatars.githubusercontent.com/u/36672242?v=4", + "description": "NbThermo is a database of nanobodies melting temperature", + "topics": [] }, { - "uid": "github/ARC-OPT/wbc", - "url": "https://github.com/ARC-OPT/wbc", - "rel": "/software/repository/github/ARC-OPT/wbc", - "avatar": "https://avatars.githubusercontent.com/u/100422923?v=4", - "description": "C++ library for optimization-based control of redundant robots", + "uid": "github/collinlewin/STELA-Toolkit", + "url": "https://github.com/collinlewin/STELA-Toolkit", + "rel": "/software/repository/github/collinlewin/STELA-Toolkit", + "avatar": "https://avatars.githubusercontent.com/u/28280691?v=4", + "description": "A Python package for interpolating astrophysical light curves using Gaussian Processes (more ML models to come!) in order to compute frequency-domain and standard time domain data products.", "topics": [] }, { - "uid": "github/filipezabala/voice", - "url": "https://github.com/filipezabala/voice", - "rel": "/software/repository/github/filipezabala/voice", - "avatar": "https://avatars.githubusercontent.com/u/35049061?v=4", - "description": "General tools for voice analysis.", + "uid": "github/horvatovichlab/MSIWarp", + "url": "https://github.com/horvatovichlab/MSIWarp", + "rel": "/software/repository/github/horvatovichlab/MSIWarp", + "avatar": "https://avatars.githubusercontent.com/u/19997545?v=4", + "description": "MAss spectra alignment tool for MSI data", "topics": [] }, { - "uid": "github/ArneTillmann/AuDoLab", - "url": "https://github.com/ArneTillmann/AuDoLab", - "rel": "/software/repository/github/ArneTillmann/AuDoLab", - "avatar": "https://avatars.githubusercontent.com/u/36853006?v=4", - "description": null, + "uid": "github/AMReX-Astro/wdmerger", + "url": "https://github.com/AMReX-Astro/wdmerger", + "rel": "/software/repository/github/AMReX-Astro/wdmerger", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "A software package for simulating white dwarf mergers with CASTRO", "topics": [] }, { - "uid": "github/glue-viz/glue", - "url": "https://github.com/glue-viz/glue", - "rel": "/software/repository/github/glue-viz/glue", - "avatar": "https://avatars.githubusercontent.com/u/1926209?v=4", - "description": "Linked Data Visualizations Across Multiple Files", + "uid": "github/AMReX-Astro/Castro", + "url": "https://github.com/AMReX-Astro/Castro", + "rel": "/software/repository/github/AMReX-Astro/Castro", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "Castro (Compressible Astrophysics): An adaptive mesh, astrophysical compressible (radiation-, magneto-) hydrodynamics simulation code for massively parallel CPU and GPU architectures.", "topics": [ - "python", - "visualization", - "data-science", - "linked-data" + "hydrodynamics", + "cfd", + "pde", + "gravity", + "radiation", + "castro", + "amr", + "adaptive-mesh-refinement", + "reactions", + "astrophysical-simulation", + "astrophysics" ] }, { - "uid": "github/fhcrc/seqmagick", - "url": "https://github.com/fhcrc/seqmagick", - "rel": "/software/repository/github/fhcrc/seqmagick", - "avatar": "https://avatars.githubusercontent.com/u/473538?v=4", - "description": "An imagemagick-like frontend to Biopython SeqIO", + "uid": "github/AMReX-Astro/Nyx", + "url": "https://github.com/AMReX-Astro/Nyx", + "rel": "/software/repository/github/AMReX-Astro/Nyx", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "An adaptive mesh, N-body hydro cosmological simulation code", + "topics": [] + }, + { + "uid": "github/AMReX-Astro/MAESTROeX", + "url": "https://github.com/AMReX-Astro/MAESTROeX", + "rel": "/software/repository/github/AMReX-Astro/MAESTROeX", + "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", + "description": "A C++ low Mach number stellar hydrodynamics code", + "topics": [] + }, + { + "uid": "github/BackofenLab/StoatyDive", + "url": "https://github.com/BackofenLab/StoatyDive", + "rel": "/software/repository/github/BackofenLab/StoatyDive", + "avatar": "https://avatars2.githubusercontent.com/u/15155517?v=4", + "description": null, "topics": [] }, { - "uid": "github/LaRoccaRaphael/MSI_recalibration", - "url": "https://github.com/LaRoccaRaphael/MSI_recalibration", - "rel": "/software/repository/github/LaRoccaRaphael/MSI_recalibration", - "avatar": "https://avatars.githubusercontent.com/u/70296317?v=4", - "description": "Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data", + "uid": "github/BackofenLab/IntaRNA", + "url": "https://github.com/BackofenLab/IntaRNA", + "rel": "/software/repository/github/BackofenLab/IntaRNA", + "avatar": "https://avatars.githubusercontent.com/u/15155517?v=4", + "description": "Efficient target prediction incorporating accessibility of interaction sites", + "topics": [ + "bioinformatics", + "interaction", + "rna", + "structure", + "tool" + ] + }, + { + "uid": "github/BackofenLab/Peakhood", + "url": "https://github.com/BackofenLab/Peakhood", + "rel": "/software/repository/github/BackofenLab/Peakhood", + "avatar": "https://avatars.githubusercontent.com/u/15155517?v=4", + "description": "Individual site context extraction for CLIP-Seq peak regions", "topics": [] }, { - "uid": "github/EXP-code/EXP", - "url": "https://github.com/EXP-code/EXP", - "rel": "/software/repository/github/EXP-code/EXP", - "avatar": "https://avatars.githubusercontent.com/u/120035355?v=4", - "description": "Basis Function Expansion C++ library and Python package for running N-body galactic simulations and dynamical discovery", + "uid": "github/nlesc/scriptcwl", + "url": "https://github.com/NLeSC/scriptcwl", + "rel": "/software/repository/github/nlesc/scriptcwl", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": "Create cwl workflows by writing a simple Python script", "topics": [ - "basis-function-expansion", - "c-plus-plus", - "n-body-simulation", - "python", - "time-series-analysis", - "galactic-dynamics" + "cwl", + "workflow", + "python" ] }, { - "uid": "github/bartongroup/RoSA", - "url": "https://github.com/bartongroup/RoSA", - "rel": "/software/repository/github/bartongroup/RoSA", - "avatar": "https://avatars.githubusercontent.com/u/7642366?v=4", - "description": "Antisense analysis scripts", + "uid": "github/nlesc/embodied-emotions-scripts", + "url": "https://github.com/NLeSC/embodied-emotions-scripts", + "rel": "/software/repository/github/nlesc/embodied-emotions-scripts", + "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "description": null, "topics": [] }, { - "uid": "github/bartongroup/yanosim", - "url": "https://github.com/bartongroup/yanosim", - "rel": "/software/repository/github/bartongroup/yanosim", - "avatar": "https://avatars.githubusercontent.com/u/7642366?v=4", - "description": "Nanopore DRS read simulator", + "uid": "github/julie-forman-kay-lab/SPyCi-PDB", + "url": "https://github.com/julie-forman-kay-lab/SPyCi-PDB", + "rel": "/software/repository/github/julie-forman-kay-lab/SPyCi-PDB", + "avatar": "https://avatars.githubusercontent.com/u/53438277?v=4", + "description": "Structural Python (Back) Calculator Interface for PDBs", "topics": [] }, { - "uid": "github/chiaraherzog/eutopsQC", - "url": "https://github.com/chiaraherzog/eutopsQC", - "rel": "/software/repository/github/chiaraherzog/eutopsQC", - "avatar": "https://avatars.githubusercontent.com/u/68517245?v=4", - "description": null, + "uid": "github/Lbalkenhol/candl", + "url": "https://github.com/Lbalkenhol/candl", + "rel": "/software/repository/github/Lbalkenhol/candl", + "avatar": "https://avatars.githubusercontent.com/u/30681063?v=4", + "description": "Differentiable Likelihood for CMB Analysis", "topics": [] }, { - "uid": "github/chiaraherzog/WIDclocks", - "url": "https://github.com/chiaraherzog/WIDclocks", - "rel": "/software/repository/github/chiaraherzog/WIDclocks", - "avatar": "https://avatars.githubusercontent.com/u/68517245?v=4", - "description": "Calculation of epigenetic WID clocks", - "topics": [] + "uid": "github/combustiontoolbox/combustion_toolbox", + "url": "https://github.com/CombustionToolbox/combustion_toolbox", + "rel": "/software/repository/github/combustiontoolbox/combustion_toolbox", + "avatar": "https://avatars.githubusercontent.com/u/165309827?v=4", + "description": "A MATLAB-GUI based open-source tool for solving gaseous combustion problems", + "topics": [ + "chemical-equilibrium", + "thermochemistry", + "matlab", + "detonation", + "app", + "open-source", + "shock-waves", + "toolbox", + "windows", + "linux", + "macos", + "hypersonics", + "ionization", + "rocket", + "dissociation", + "thermochemical-code", + "combustion", + "combustion-toolbox" + ] }, { - "uid": "github/martinfleis/clustergram", - "url": "https://github.com/martinfleis/clustergram", - "rel": "/software/repository/github/martinfleis/clustergram", - "avatar": "https://avatars.githubusercontent.com/u/36797143?v=4", - "description": "Clustergram - Visualization and diagnostics for cluster analysis in Python", - "topics": [] + "uid": "github/Trovemaster/exocross", + "url": "https://github.com/Trovemaster/exocross", + "rel": "/software/repository/github/Trovemaster/exocross", + "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", + "description": "Fortran 2003 code to generate molecular spectra, partition functions, lifetimes, cooling functions etc using ExoMol line lists", + "topics": [ + "physics", + "spectroscopy", + "molecules" + ] }, { - "uid": "github/jorittmo/singcar", - "url": "https://github.com/jorittmo/singcar", - "rel": "/software/repository/github/jorittmo/singcar", - "avatar": "https://avatars.githubusercontent.com/u/62261432?v=4", - "description": "singcar: A package for analysing case comparisons to normative controls", + "uid": "github/Trovemaster/Duo", + "url": "https://github.com/Trovemaster/Duo", + "rel": "/software/repository/github/Trovemaster/Duo", + "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", + "description": "Duo is a diatomic code for solving a fully coupled rovibronic Schroedinger equation", "topics": [] }, { - "uid": "github/Johannes-Sahlmann/pygacs", - "url": "https://github.com/Johannes-Sahlmann/pygacs", - "rel": "/software/repository/github/Johannes-Sahlmann/pygacs", - "avatar": "https://avatars.githubusercontent.com/u/13909167?v=4", - "description": "Toolkit to manipulate Gaia catalogue tables hosted at ESAC archive.", + "uid": "github/Trovemaster/TROVE", + "url": "https://github.com/Trovemaster/TROVE", + "rel": "/software/repository/github/Trovemaster/TROVE", + "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", + "description": "Theoretical ROVibrational Energies: A variational program for accurate nuclear motion calculations", "topics": [] }, { - "uid": "github/benmkent/SparseGridsKit.jl", - "url": "https://github.com/benmkent/SparseGridsKit.jl", - "rel": "/software/repository/github/benmkent/SparseGridsKit.jl", - "avatar": "https://avatars.githubusercontent.com/u/52756911?v=4", - "description": "Simple sparse grid interpolation Julia implementation", - "topics": [] + "uid": "github/spm/spm", + "url": "https://github.com/spm/spm", + "rel": "/software/repository/github/spm/spm", + "avatar": "https://avatars.githubusercontent.com/u/14014701?v=4", + "description": "SPM (Statistical Parametric Mapping) - Development Version", + "topics": [ + "matlab", + "neuroscience", + "neuroimaging", + "spm", + "eeg", + "fmri", + "meg", + "pet", + "spect", + "mapping", + "parametric", + "statistical", + "opm", + "nifti", + "brain", + "dcm", + "vbm" + ] }, { - "uid": "github/smillerc/CurvilinearGrids.jl", - "url": "https://github.com/smillerc/CurvilinearGrids.jl", - "rel": "/software/repository/github/smillerc/CurvilinearGrids.jl", - "avatar": "https://avatars.githubusercontent.com/u/1474554?v=4", - "description": "A Julia library for working with curvilinear grids", + "uid": "github/UCD4IDS/WaveletsExt.jl", + "url": "https://github.com/UCD4IDS/WaveletsExt.jl", + "rel": "/software/repository/github/UCD4IDS/WaveletsExt.jl", + "avatar": "https://avatars.githubusercontent.com/u/82732920?v=4", + "description": "A Julia extension package to Wavelets.jl", "topics": [ - "cfd", "julia", - "mesh-generation", - "pde" + "wavelet-transform", + "signal-processing", + "wavelet", + "filter", + "ac-wavelets", + "stationary-wavelets" ] }, { - "uid": "github/DLR-RM/BlenderProc", - "url": "https://github.com/DLR-RM/BlenderProc", - "rel": "/software/repository/github/DLR-RM/BlenderProc", - "avatar": "https://avatars.githubusercontent.com/u/25227811?v=4", - "description": "A procedural Blender pipeline for photorealistic training image generation", + "uid": "github/mzkhalid039/DWBuilder", + "url": "https://github.com/mzkhalid039/DWBuilder", + "rel": "/software/repository/github/mzkhalid039/DWBuilder", + "avatar": "https://avatars.githubusercontent.com/u/52278972?v=4", + "description": "Ferroelectric/Ferroelastic domain wall builder", "topics": [ - "blender-pipeline", - "segmentation", - "depth-images", - "camera-positions", - "suncg-scene", - "camera-sampling", - "blender-installation", - "synthetic", - "blender", - "rendering", - "pose-estimation", - "synthetic-data", - "python", - "3d-graphics", - "computer-graphics", - "3d-reconstruction", - "3d-engines", - "3d-front-dataset" + "ferroelectric-domains", + "ferroelectrics", + "domain-walls", + "atomic", + "interface-builder" ] }, { - "uid": "github/lumen-org/lumen", - "url": "https://github.com/lumen-org/lumen", - "rel": "/software/repository/github/lumen-org/lumen", - "avatar": "https://avatars.githubusercontent.com/u/43880697?v=4", - "description": "Interactive web application for the exploration, comparision and validation of probability models and its data", + "uid": "github/fmichel/MaDKit", + "url": "https://github.com/fmichel/MaDKit", + "rel": "/software/repository/github/fmichel/MaDKit", + "avatar": "https://avatars.githubusercontent.com/u/645197?v=4", + "description": "MultiAgent Development Kit - version 5", "topics": [ - "web-application" + "multi-agent", + "simulation", + "agent", + "java", + "artificial-intelligence", + "agent-based", + "agent-based-simulation" ] }, { - "uid": "github/mlinderm/npsv", - "url": "https://github.com/mlinderm/npsv", - "rel": "/software/repository/github/mlinderm/npsv", - "avatar": "https://avatars.githubusercontent.com/u/419959?v=4", - "description": "Non-parametric structural variant genotyper", - "topics": [] + "uid": "github/fmichel/TurtleKit", + "url": "https://github.com/fmichel/TurtleKit", + "rel": "/software/repository/github/fmichel/TurtleKit", + "avatar": "https://avatars.githubusercontent.com/u/645197?v=4", + "description": "TurtleKit 3 - Multi-Agent Based Simulation Platform", + "topics": [ + "mabs", + "agent", + "java", + "abm" + ] }, { - "uid": "github/c3s-magic/c3s-magic-wps", - "url": "https://github.com/c3s-magic/c3s-magic-wps", - "rel": "/software/repository/github/c3s-magic/c3s-magic-wps", - "avatar": "https://avatars1.githubusercontent.com/u/22588564?v=4", - "description": null, + "uid": "github/biswajitmb/DarpanX", + "url": "https://github.com/biswajitmb/DarpanX", + "rel": "/software/repository/github/biswajitmb/DarpanX", + "avatar": "https://avatars.githubusercontent.com/u/65720146?v=4", + "description": "DarpanX is a Python 3 package that provides functionality to compute reflectivity and other specular optical functions of a multilayer or single layer mirror for different energy and angles as well as to fit the XRR measurements of the mirrors.", "topics": [] }, { - "uid": "github/AprilYuge/ResPAN", - "url": "https://github.com/AprilYuge/ResPAN", - "rel": "/software/repository/github/AprilYuge/ResPAN", - "avatar": "https://avatars.githubusercontent.com/u/42819288?v=4", - "description": "a light structured Residual autoencoder and mutual nearest neighbor Paring guided Adversarial Network for scRNA-seq batch correction", + "uid": "github/JLBLine/WODEN", + "url": "https://github.com/JLBLine/WODEN", + "rel": "/software/repository/github/JLBLine/WODEN", + "avatar": "https://avatars.githubusercontent.com/u/7925164?v=4", + "description": "CUDA code designed to simulate interferometric data using point, Gaussian, and shapelet sky models", "topics": [] }, { - "uid": "github/ZhenjiangFan/DAG-deepVASE", - "url": "https://github.com/ZhenjiangFan/DAG-deepVASE", - "rel": "/software/repository/github/ZhenjiangFan/DAG-deepVASE", - "avatar": "https://avatars.githubusercontent.com/u/21962827?v=4", + "uid": "github/JLBLine/PUMA", + "url": "https://github.com/JLBLine/PUMA", + "rel": "/software/repository/github/JLBLine/PUMA", + "avatar": "https://avatars.githubusercontent.com/u/7925164?v=4", "description": null, "topics": [] }, { - "uid": "github/radwinskis/RadGEEToolbox", - "url": "https://github.com/radwinskis/RadGEEToolbox", - "rel": "/software/repository/github/radwinskis/RadGEEToolbox", - "avatar": "https://avatars.githubusercontent.com/u/78708345?v=4", - "description": "Python package simplifying large-scale operations using Google Earth Engine (GEE) for users who utilize Landsat and Sentinel", + "uid": "github/bertrandplez/Turbospectrum_NLTE", + "url": "https://github.com/bertrandplez/Turbospectrum_NLTE", + "rel": "/software/repository/github/bertrandplez/Turbospectrum_NLTE", + "avatar": "https://avatars.githubusercontent.com/u/30231362?v=4", + "description": "Turbospectrum v20 with NLTE capability", "topics": [] }, { - "uid": "github/damocles-code/damocles", - "url": "https://github.com/damocles-code/damocles", - "rel": "/software/repository/github/damocles-code/damocles", - "avatar": "https://avatars.githubusercontent.com/u/16516847?v=4", - "description": null, + "uid": "github/bertrandplez/Turbospectrum2019", + "url": "https://github.com/bertrandplez/Turbospectrum2019", + "rel": "/software/repository/github/bertrandplez/Turbospectrum2019", + "avatar": "https://avatars.githubusercontent.com/u/30231362?v=4", + "description": "synthetic spectrum calculation companion to MARCS", "topics": [] }, { - "uid": "github/ThomasBakx/cobra", - "url": "https://github.com/ThomasBakx/cobra", - "rel": "/software/repository/github/ThomasBakx/cobra", - "avatar": "https://avatars.githubusercontent.com/u/51948353?v=4", - "description": "cobra git repository", + "uid": "github/GoelandProver/Goeland", + "url": "https://github.com/GoelandProver/Goeland", + "rel": "/software/repository/github/GoelandProver/Goeland", + "avatar": "https://avatars.githubusercontent.com/u/99547210?v=4", + "description": "A first-order concurrent automated theorem prover", "topics": [] }, { - "uid": "github/gigjozsa/tirific", - "url": "https://github.com/gigjozsa/tirific", - "rel": "/software/repository/github/gigjozsa/tirific", - "avatar": "https://avatars.githubusercontent.com/u/8706644?v=4", - "description": "Tilted-Ring-Fitting-Code", + "uid": "github/enthusi/feline", + "url": "https://github.com/enthusi/feline", + "rel": "/software/repository/github/enthusi/feline", + "avatar": "https://avatars.githubusercontent.com/u/30237776?v=4", + "description": "FindEmissionLINEs", "topics": [] }, { - "uid": "github/dib-lab/TheGreatGenotyper", - "url": "https://github.com/dib-lab/TheGreatGenotyper", - "rel": "/software/repository/github/dib-lab/TheGreatGenotyper", - "avatar": "https://avatars.githubusercontent.com/u/1740697?v=4", - "description": null, - "topics": [] + "uid": "github/ADAH-EviDENce/evidence", + "url": "https://github.com/ADAH-EviDENce/evidence", + "rel": "/software/repository/github/ADAH-EviDENce/evidence", + "avatar": "https://avatars2.githubusercontent.com/u/37336361?v=4", + "description": "doc2vec-based assisted close reading with support for abstract concept-based search and context-based search", + "topics": [ + "corpus", + "close-reading", + "search", + "humanities" + ] }, { - "uid": "github/dib-lab/dammit", - "url": "https://github.com/dib-lab/dammit", - "rel": "/software/repository/github/dib-lab/dammit", - "avatar": "https://avatars.githubusercontent.com/u/1740697?v=4", - "description": "just annotate it, dammit!", + "uid": "github/orbisgis/lczexplore", + "url": "https://github.com/orbisgis/lczexplore", + "rel": "/software/repository/github/orbisgis/lczexplore", + "avatar": "https://avatars.githubusercontent.com/u/9842346?v=4", + "description": null, "topics": [ - "annotation", - "transcriptomics", - "bioinformatics" + "climate-change", + "environment", + "r-spatial", + "geoclimate" ] }, { - "uid": "github/dib-lab/sourmash", - "url": "https://github.com/sourmash-bio/sourmash", - "rel": "/software/repository/github/dib-lab/sourmash", - "avatar": "https://avatars.githubusercontent.com/u/59402508?v=4", - "description": "Quickly search, compare, and analyze genomic and metagenomic data sets.", + "uid": "github/MrMinimal64/multivar_horner", + "url": "https://github.com/MrMinimal64/multivar_horner", + "rel": "/software/repository/github/MrMinimal64/multivar_horner", + "avatar": "https://avatars3.githubusercontent.com/u/15111305?v=4", + "description": "python package implementing a multivariate Horner scheme for efficiently evaluating multivariate polynomials ", "topics": [ - "minhash", - "bioinformatics", - "rust", + "math", + "mathematics", + "polynomials", + "horner-scheme", + "multivariate", + "multivariate-polynomials", + "hornerscheme-solver", + "horner", "python", - "sourmash" + "python3", + "factorization", + "polynomial", + "polynomial-evaluation", + "evaluation" ] }, { - "uid": "github/GunzIvan28/rMAP", - "url": "https://github.com/GunzIvan28/rMAP", - "rel": "/software/repository/github/GunzIvan28/rMAP", - "avatar": "https://avatars.githubusercontent.com/u/32091245?v=4", - "description": "Bacterial analysis Toolbox for profiling the Resistome of ESKAPE pathogens using WGS", + "uid": "github/pedro-acunha/SHEEP", + "url": "https://github.com/pedro-acunha/SHEEP", + "rel": "/software/repository/github/pedro-acunha/SHEEP", + "avatar": "https://avatars.githubusercontent.com/u/53006840?v=4", + "description": "Machine Learning pipeline to classify astronomical sources into galaxies, quasars and stars using photometric data.", "topics": [ - "bacteria", - "resistome", - "eskape", - "wgs", - "illumina" + "astronomy", + "astronomy-software", + "classification", + "machine-learning", + "photometric-redshifts", + "photometry" ] }, { - "uid": "github/dnarayanan/powderday", - "url": "https://github.com/dnarayanan/powderday", - "rel": "/software/repository/github/dnarayanan/powderday", - "avatar": "https://avatars.githubusercontent.com/u/4460891?v=4", - "description": "powderday dust radiative transfer", + "uid": "github/SuLab/Wikidata-phenomizer", + "url": "https://github.com/SuLab/Wikidata-phenomizer", + "rel": "/software/repository/github/SuLab/Wikidata-phenomizer", + "avatar": "https://avatars3.githubusercontent.com/u/1891115?v=4", + "description": "Incorporate wikidata statements into phenomizer", "topics": [] }, { - "uid": "github/SSDataLab/vetting", - "url": "https://github.com/SSDataLab/vetting", - "rel": "/software/repository/github/SSDataLab/vetting", - "avatar": "https://avatars.githubusercontent.com/u/65370866?v=4", - "description": "Simple, stand-alone tools for vetting transit signals in Kepler, K2 and TESS data", - "topics": [] + "uid": "github/j-faria/kima", + "url": "https://github.com/j-faria/kima", + "rel": "/software/repository/github/j-faria/kima", + "avatar": "https://avatars.githubusercontent.com/u/1958991?v=4", + "description": "Exoplanet detection in RVs with DNest4 and GPs", + "topics": [ + "exoplanets", + "radial-velocity", + "bayesian", + "gaussian-processes", + "hacktoberfest" + ] }, { - "uid": "github/SSDataLab/psfmachine", - "url": "https://github.com/SSDataLab/psfmachine", - "rel": "/software/repository/github/SSDataLab/psfmachine", - "avatar": "https://avatars.githubusercontent.com/u/65370866?v=4", - "description": "Tool kit for doing PSF photometry", + "uid": "github/cl3425/Clairvoyance", + "url": "https://github.com/cl3425/Clairvoyance", + "rel": "/software/repository/github/cl3425/Clairvoyance", + "avatar": "https://avatars.githubusercontent.com/u/16911363?v=4", + "description": "Predicting multiple-planet systems for TESS", "topics": [] }, { - "uid": "github/adrijd/beamconv", - "url": "https://github.com/AdriJD/beamconv", - "rel": "/software/repository/github/adrijd/beamconv", - "avatar": "https://avatars.githubusercontent.com/u/14160114?v=4", - "description": "Code library to simulate CMB detector data with realistic optics-related contributions", + "uid": "github/erhard-lab/gedi", + "url": "https://github.com/erhard-lab/gedi", + "rel": "/software/repository/github/erhard-lab/gedi", + "avatar": "https://avatars.githubusercontent.com/u/24650596?v=4", + "description": "Gedi is a software platform for working with genomic data such as sequencing reads, sequences, per-base numeric values or annotations written in Java.", "topics": [] }, { - "uid": "github/ci-for-science/self-hosted-runners", - "url": "https://github.com/ci-for-research/self-hosted-runners", - "rel": "/software/repository/github/ci-for-science/self-hosted-runners", - "avatar": "https://avatars3.githubusercontent.com/u/67105980?v=4", - "description": "Recipe to install and configure a GitHub action runner using Ansible", + "uid": "github/EdwardBerman/shopt", + "url": "https://github.com/EdwardBerman/shopt", + "rel": "/software/repository/github/EdwardBerman/shopt", + "avatar": "https://avatars.githubusercontent.com/u/94378814?v=4", + "description": "Shear Optimization with ShOpt.jl, a julia package for empirical point spread function characterizations", "topics": [ - "continuous-integration", - "github-actions" + "astrophysics", + "julia", + "jwst", + "point-spread-function", + "weak-lensing" ] }, { - "uid": "github/Kambrian/HBTplus", - "url": "https://github.com/Kambrian/HBTplus", - "rel": "/software/repository/github/Kambrian/HBTplus", - "avatar": "https://avatars.githubusercontent.com/u/7944948?v=4", - "description": "HBT+ subhalo finder and merger tree builder, the tool to get you out of mess and back to physics.", + "uid": "github/KenethGarcia/ClassiPyGRB", + "url": "https://github.com/KenethGarcia/ClassiPyGRB", + "rel": "/software/repository/github/KenethGarcia/ClassiPyGRB", + "avatar": "https://avatars.githubusercontent.com/u/102555105?v=4", + "description": "This repository contains all the updates, code, and documentation related to ClassiPyGRB.", "topics": [ - "halofinder", - "cosmology", - "merger-tree", - "subhalo", - "hbt", - "dark-matter", + "grbs", + "machine-learning", + "machine-learning-algorithms", "astrophysics", - "simulation" + "unsupervised-learning", + "unsupervised-machine-learning" ] }, { - "uid": "github/microbioinformatic/Co-PATHOgenex", - "url": "https://github.com/microbioinformatic/Co-PATHOgenex", - "rel": "/software/repository/github/microbioinformatic/Co-PATHOgenex", - "avatar": "https://avatars.githubusercontent.com/u/38429110?v=4", - "description": "Supporting scripts and files for R shiny app Co-PATHOgenex", - "topics": [] + "uid": "github/keurfonluu/toughio", + "url": "https://github.com/keurfonluu/toughio", + "rel": "/software/repository/github/keurfonluu/toughio", + "avatar": "https://avatars0.githubusercontent.com/u/16566206?v=4", + "description": "Pre- and post-processing Python library for TOUGH", + "topics": [ + "tough2", + "tough3", + "preprocessing", + "postprocessing", + "io" + ] + }, + { + "uid": "github/FabrizioMusacchio/MotilA", + "url": "https://github.com/FabrizioMusacchio/MotilA", + "rel": "/software/repository/github/FabrizioMusacchio/MotilA", + "avatar": "https://avatars.githubusercontent.com/u/81537532?v=4", + "description": "Pipeline for analyzing microglial fine process motility from 4D/5D multi-photon imaging data", + "topics": [ + "image-processing", + "image-segmentation", + "microglia", + "microglial-motility", + "motility", + "motility-analysis", + "neuroscience", + "python" + ] }, { - "uid": "github/AntoineDarveau/jwst", - "url": "https://github.com/AntoineDarveau/jwst", - "rel": "/software/repository/github/AntoineDarveau/jwst", - "avatar": "https://avatars.githubusercontent.com/u/25065082?v=4", - "description": "Python library for science observations from the James Webb Space Telescope ", + "uid": "github/ClaraLage/Portfolio-Transition", + "url": "https://github.com/ClaraLage/Portfolio-Transition", + "rel": "/software/repository/github/ClaraLage/Portfolio-Transition", + "avatar": "https://avatars.githubusercontent.com/u/76178917?v=4", + "description": "https://hal.archives-ouvertes.fr/hal-03423114/", "topics": [] }, { - "uid": "github/tomasplsek/CADET", - "url": "https://github.com/tomasplsek/CADET", - "rel": "/software/repository/github/tomasplsek/CADET", - "avatar": "https://avatars.githubusercontent.com/u/34679051?v=4", - "description": "Machine learning pipeline trained for finding and size-estimating X-ray cavities from noisy Chandra images of early-type galaxies.", + "uid": "github/INRS-France/predicting_alarm_audibility", + "url": "https://github.com/INRS-France/predicting_alarm_audibility", + "rel": "/software/repository/github/INRS-France/predicting_alarm_audibility", + "avatar": "https://avatars.githubusercontent.com/u/157127585?v=4", + "description": "This Python code is derived from the research article \"Evaluating and Predicting the Audibility of Acoustic Alarms in the Workplace Using Experimental Methods and Deep Learning\" published in the journal Applied Acoustics. It provides a framework for predicting the audibility of acoustic alarms in noise, and includes scripts to reproduce the results", "topics": [ - "jax", - "segmentation", - "cavities", - "convolutional-neural-networks", - "keras", - "agn-feedback" + "audibility", + "alarms", + "convolutional-neural-network", + "dataset", + "psychoacoustics", + "occupational-noise" ] }, { - "uid": "github/nexml/nexml.java", - "url": "https://github.com/nexml/nexml.java", - "rel": "/software/repository/github/nexml/nexml.java", - "avatar": "https://avatars.githubusercontent.com/u/1506716?v=4", - "description": "Java API for NeXML.", + "uid": "github/dpseidel/stmove", + "url": "https://github.com/dpseidel/stmove", + "rel": "/software/repository/github/dpseidel/stmove", + "avatar": "https://avatars1.githubusercontent.com/u/16724456?v=4", + "description": "Build reproducible reports for spatial-temporal animal movement analysis", "topics": [] }, { - "uid": "github/lyf222/alpconv", - "url": "https://github.com/lyf222/alpconv", - "rel": "/software/repository/github/lyf222/alpconv", - "avatar": "https://avatars.githubusercontent.com/u/84237604?v=4", - "description": "calculating alp-photon conversion", + "uid": "github/tiberioap/grav_waldo", + "url": "https://github.com/tiberioap/grav_waldo", + "rel": "/software/repository/github/tiberioap/grav_waldo", + "avatar": "https://avatars.githubusercontent.com/u/51127235?v=4", + "description": "Waveform anomaly detector", "topics": [] }, { - "uid": "github/Valdes-Tresanco-MS/NbThermo", - "url": "https://github.com/Valdes-Tresanco-MS/NbThermo", - "rel": "/software/repository/github/Valdes-Tresanco-MS/NbThermo", - "avatar": "https://avatars.githubusercontent.com/u/36672242?v=4", - "description": "NbThermo is a database of nanobodies melting temperature", + "uid": "github/pierrehoudayer/RUBIS", + "url": "https://github.com/pierrehoudayer/RUBIS", + "rel": "/software/repository/github/pierrehoudayer/RUBIS", + "avatar": "https://avatars.githubusercontent.com/u/91544829?v=4", + "description": "Rotation code Using Barotropy conservation over Isopotential Surfaces (RUBIS)", "topics": [] }, { - "uid": "github/mkplummer/Imber", - "url": "https://github.com/mkplummer/Imber", - "rel": "/software/repository/github/mkplummer/Imber", - "avatar": "https://avatars.githubusercontent.com/u/80552610?v=4", - "description": "Python module for both numerical simulation of stellar/substellar surfaces and fitting the resulting spectral line profiles and photometric light curves with analytical models.", + "uid": "github/DirectDM/directdm-py", + "url": "https://github.com/DirectDM/directdm-py", + "rel": "/software/repository/github/DirectDM/directdm-py", + "avatar": "https://avatars.githubusercontent.com/u/30795796?v=4", + "description": "Python version of the DirectDM package", "topics": [] }, { - "uid": "github/dansarie/sboxgates", - "url": "https://github.com/dansarie/sboxgates", - "rel": "/software/repository/github/dansarie/sboxgates", - "avatar": "https://avatars.githubusercontent.com/u/16786778?v=4", - "description": "Program for finding low gate count implementations of S-boxes.", - "topics": [ - "cryptanalysis", - "mpi", - "logic-circuit", - "cuda" - ] - }, - { - "uid": "github/aboucaud/pypher", - "url": "https://github.com/aboucaud/pypher", - "rel": "/software/repository/github/aboucaud/pypher", - "avatar": "https://avatars.githubusercontent.com/u/3065310?v=4", - "description": "PSF Homogenization kERnels", + "uid": "github/DirectDM/directdm-mma", + "url": "https://github.com/DirectDM/directdm-mma", + "rel": "/software/repository/github/DirectDM/directdm-mma", + "avatar": "https://avatars.githubusercontent.com/u/30795796?v=4", + "description": "DirectDM Mathematica package", "topics": [] }, { - "uid": "github/T0ngChen/medRCT", - "url": "https://github.com/T0ngChen/medRCT", - "rel": "/software/repository/github/T0ngChen/medRCT", - "avatar": "https://avatars.githubusercontent.com/u/44077157?v=4", - "description": "\ud83d\udce6R package medRCT", - "topics": [ - "causal-inference", - "causal-mediation-analysis", - "interventional-effects", - "mediation", - "target-trial", - "rstats", - "mediation-analysis", - "rstat", - "rstats-package" - ] + "uid": "github/huchiayu/ParticleGridMapper.jl", + "url": "https://github.com/huchiayu/ParticleGridMapper.jl", + "rel": "/software/repository/github/huchiayu/ParticleGridMapper.jl", + "avatar": "https://avatars.githubusercontent.com/u/23061774?v=4", + "description": null, + "topics": [] }, { - "uid": "github/coljac/sensie", - "url": "https://github.com/coljac/sensie", - "rel": "/software/repository/github/coljac/sensie", - "avatar": "https://avatars3.githubusercontent.com/u/191407?v=4", - "description": "Toolset for probing the sensitivity of a deep neural network model to various properties of the data.", + "uid": "github/wdpozzo/raynest", + "url": "https://github.com/wdpozzo/raynest", + "rel": "/software/repository/github/wdpozzo/raynest", + "avatar": "https://avatars.githubusercontent.com/u/11406030?v=4", + "description": "Nested sampling algorithm parallelised through ray", "topics": [] }, { - "uid": "github/BigDataBiology/macrel", - "url": "https://github.com/BigDataBiology/macrel", - "rel": "/software/repository/github/BigDataBiology/macrel", - "avatar": "https://avatars.githubusercontent.com/u/38910137?v=4", - "description": "Predict AMPs in (meta)genomes and peptides", + "uid": "github/scikit-image/scikit-image", + "url": "https://github.com/scikit-image/scikit-image", + "rel": "/software/repository/github/scikit-image/scikit-image", + "avatar": "https://avatars0.githubusercontent.com/u/897180?v=4", + "description": "Image processing in Python", "topics": [ - "metagenomics", - "peptide", - "bioinformatics", - "biology", - "genomics", - "ngless" + "image-processing", + "python", + "computer-vision" ] }, { - "uid": "github/BigDataBiology/argNorm", - "url": "https://github.com/BigDataBiology/argNorm", - "rel": "/software/repository/github/BigDataBiology/argNorm", - "avatar": "https://avatars.githubusercontent.com/u/38910137?v=4", - "description": "ARG normalization by mapping to the ARO ontology.", + "uid": "github/plotly/dash", + "url": "https://github.com/plotly/dash", + "rel": "/software/repository/github/plotly/dash", + "avatar": "https://avatars2.githubusercontent.com/u/5997976?v=4", + "description": "Analytical Web Apps for Python, R, Julia, and Jupyter. No JavaScript Required.", "topics": [ - "antibiotic-resistance", - "bioinformatics" + "dash", + "plotly", + "data-visualization", + "data-science", + "gui-framework", + "flask", + "react", + "python", + "finance", + "bioinformatics", + "technical-computing", + "charting", + "plotly-dash", + "web-app", + "productivity", + "no-javascript", + "modeling", + "r", + "rstats", + "jupyter" ] }, { - "uid": "github/sndik16/SFR_ChebyFit_example", - "url": "https://github.com/sndik16/SFR_ChebyFit_example", - "rel": "/software/repository/github/sndik16/SFR_ChebyFit_example", - "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", - "description": "A minimal example notebook with code demonstrating Chebyshev polynomial fitting to correct SFR values from one estimator to the baseline for another estimator", - "topics": [] - }, - { - "uid": "github/sndik16/GAMA_quasarhosts_starformation", - "url": "https://github.com/sndik16/GAMA_quasarhosts_starformation", - "rel": "/software/repository/github/sndik16/GAMA_quasarhosts_starformation", - "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", - "description": "Code used in Stone et al. (in review, ApJ) for GAMA quasar host star formation history paper analysis.", + "uid": "github/simd-everywhere/simde", + "url": "https://github.com/simd-everywhere/simde", + "rel": "/software/repository/github/simd-everywhere/simde", + "avatar": "https://avatars.githubusercontent.com/u/67172048?v=4", + "description": "Implementations of SIMD instruction sets for systems which don't natively support them.", "topics": [ - "astronomy", - "galaxies", - "quasars", - "research", - "survey" + "simd-intrinsics", + "sse", + "neon", + "arm", + "avx", + "simd", + "sse2", + "sse3", + "ssse3", + "sse41", + "sse42", + "avx2", + "avx512", + "fma", + "gfni", + "mmx", + "altivec", + "powerpc", + "arm64", + "vectorization" ] }, { - "uid": "github/sndik16/light-GG", - "url": "https://github.com/sndik16/light-GG", - "rel": "/software/repository/github/sndik16/light-GG", - "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", - "description": "2D Grid model which is light on memory usage", + "uid": "github/EISy-as-Py/hardy", + "url": "https://github.com/EISy-as-Py/hardy", + "rel": "/software/repository/github/EISy-as-Py/hardy", + "avatar": "https://avatars.githubusercontent.com/u/60707649?v=4", + "description": "Handling Arbitrary Recognition of Data! y not?", "topics": [] }, { - "uid": "github/ageorgakakis/StructureFunction", - "url": "https://github.com/ageorgakakis/StructureFunction", - "rel": "/software/repository/github/ageorgakakis/StructureFunction", - "avatar": "https://avatars.githubusercontent.com/u/17427270?v=4", - "description": null, + "uid": "github/dsoave/JLS", + "url": "https://github.com/dsoave/JLS", + "rel": "/software/repository/github/dsoave/JLS", + "avatar": "https://avatars.githubusercontent.com/u/18703690?v=4", + "description": "JLS", "topics": [] }, { - "uid": "github/rjsmethurst/snitch", - "url": "https://github.com/rjsmethurst/snitch", - "rel": "/software/repository/github/rjsmethurst/snitch", - "avatar": "https://avatars.githubusercontent.com/u/5754386?v=4", - "description": "Bayesian inference of star formation histories using emission and absorption spectral features", + "uid": "github/microbioinformatic/Co-PATHOgenex", + "url": "https://github.com/microbioinformatic/Co-PATHOgenex", + "rel": "/software/repository/github/microbioinformatic/Co-PATHOgenex", + "avatar": "https://avatars.githubusercontent.com/u/38429110?v=4", + "description": "Supporting scripts and files for R shiny app Co-PATHOgenex", "topics": [] }, { - "uid": "github/smog-server/OpenSMOG", - "url": "https://github.com/smog-server/OpenSMOG", - "rel": "/software/repository/github/smog-server/OpenSMOG", - "avatar": "https://avatars.githubusercontent.com/u/88061180?v=4", - "description": "OpenSMOG is a Python library for performing molecular dynamics simulations using Structure-Based Models. OpenSMOG uses OpenMM.", - "topics": [] + "uid": "github/jboynyc/textnets", + "url": "https://github.com/jboynyc/textnets", + "rel": "/software/repository/github/jboynyc/textnets", + "avatar": "https://avatars1.githubusercontent.com/u/2187261?v=4", + "description": "Text analysis with networks.", + "topics": [ + "nlp", + "network-analysis", + "sociology", + "visualization", + "text-analysis", + "text-as-data", + "computational-social-science" + ] }, { - "uid": "github/aakepley/autobox", - "url": "https://github.com/aakepley/autobox", - "rel": "/software/repository/github/aakepley/autobox", - "avatar": "https://avatars.githubusercontent.com/u/2965853?v=4", - "description": "Prototype of an autoboxing routine for tclean", + "uid": "github/bokunoBike/m6AGE", + "url": "https://github.com/bokunoBike/m6AGE", + "rel": "/software/repository/github/bokunoBike/m6AGE", + "avatar": "https://avatars.githubusercontent.com/u/31384108?v=4", + "description": "A predictor for m6A sites.", "topics": [] }, { - "uid": "github/emossoux/LIFELINE", - "url": "https://github.com/emossoux/LIFELINE", - "rel": "/software/repository/github/emossoux/LIFELINE", - "avatar": "https://avatars.githubusercontent.com/u/39989911?v=4", - "description": "Program for the computation of line profile in colliding wind binaries", + "uid": "github/lomereiter/sambamba", + "url": "https://github.com/biod/sambamba", + "rel": "/software/repository/github/lomereiter/sambamba", + "avatar": "https://avatars.githubusercontent.com/u/3667078?v=4", + "description": "Tools for working with SAM/BAM data", "topics": [ - "x-ray", - "binary", - "astrophysics", - "stars" + "sam", + "bam", + "bioinformatics" ] }, { - "uid": "github/GijsMulders/epos", - "url": "https://github.com/GijsMulders/epos", - "rel": "/software/repository/github/GijsMulders/epos", - "avatar": "https://avatars.githubusercontent.com/u/13457058?v=4", - "description": "Exoplanet Population Observation Simulator", + "uid": "github/mpi4jax/mpi4jax", + "url": "https://github.com/mpi4jax/mpi4jax", + "rel": "/software/repository/github/mpi4jax/mpi4jax", + "avatar": "https://avatars.githubusercontent.com/u/81360121?v=4", + "description": "Zero-copy MPI communication of JAX arrays, for turbo-charged HPC applications in Python :zap:", + "topics": [ + "mpi", + "jax", + "jit", + "xla", + "gpu", + "parallel-computing", + "high-performance-computing" + ] + }, + { + "uid": "github/lu-yizhou/ClusterSeg", + "url": "https://github.com/lu-yizhou/ClusterSeg", + "rel": "/software/repository/github/lu-yizhou/ClusterSeg", + "avatar": "https://avatars.githubusercontent.com/u/51467771?v=4", + "description": null, "topics": [] }, { - "uid": "github/vicruiser/3Dmapper", - "url": "https://github.com/vicruiser/3Dmapper", - "rel": "/software/repository/github/vicruiser/3Dmapper", - "avatar": "https://avatars.githubusercontent.com/u/14994349?v=4", - "description": "Map genetic variants and protein positions to protein interfaces in 3D", + "uid": "github/cc646201081/CircSI-SSL", + "url": "https://github.com/cc646201081/CircSI-SSL", + "rel": "/software/repository/github/cc646201081/CircSI-SSL", + "avatar": "https://avatars.githubusercontent.com/u/56387765?v=4", + "description": null, "topics": [] }, { - "uid": "github/ruiying-ocean/cgeniepy", - "url": "https://github.com/ruiying-ocean/cgeniepy", - "rel": "/software/repository/github/ruiying-ocean/cgeniepy", - "avatar": "https://avatars.githubusercontent.com/u/38958822?v=4", - "description": "A Python package for analysing the cGENIE model output", + "uid": "github/davidgardenier/frbpoppy", + "url": "https://github.com/davidgardenier/frbpoppy", + "rel": "/software/repository/github/davidgardenier/frbpoppy", + "avatar": "https://avatars.githubusercontent.com/u/14091346?v=4", + "description": "Fast Radio Burst Population Synthesis in Python", "topics": [ - "cgenie", - "earth-system-model", - "python", - "earth-sciences", - "oceanography", - "visualisation" + "astronomy", + "population-synthesis", + "frb", + "frbs", + "fast-radio-bursts" ] }, { - "uid": "github/algo-cancer/CAMMiQ", - "url": "https://github.com/algo-cancer/CAMMiQ", - "rel": "/software/repository/github/algo-cancer/CAMMiQ", - "avatar": "https://avatars.githubusercontent.com/u/42399598?v=4", - "description": "Metagenomics microbial abundance quantification", - "topics": [] + "uid": "github/davidgardenier/frbcat", + "url": "https://github.com/davidgardenier/frbcat", + "rel": "/software/repository/github/davidgardenier/frbcat", + "avatar": "https://avatars.githubusercontent.com/u/14091346?v=4", + "description": "Query Fast Radio Burst catalogues", + "topics": [ + "frbs" + ] }, { - "uid": "github/NextGenCMB/lensitbiases", - "url": "https://github.com/NextGenCMB/lensitbiases", - "rel": "/software/repository/github/NextGenCMB/lensitbiases", - "avatar": "https://avatars.githubusercontent.com/u/72163365?v=4", - "description": "rfft-based flat-sky CMB lensing tools", + "uid": "github/locasto/libdisorder", + "url": "https://github.com/locasto/libdisorder", + "rel": "/software/repository/github/locasto/libdisorder", + "avatar": "https://avatars.githubusercontent.com/u/334168?v=4", + "description": "A simple C library for entropy measurement of byte streams and other data.", "topics": [] }, { - "uid": "github/pelican/pelican", - "url": "https://github.com/pelican/pelican", - "rel": "/software/repository/github/pelican/pelican", - "avatar": "https://avatars.githubusercontent.com/u/144586?v=4", - "description": "Pipeline for Extensible Lightweight Imaging and CAlibratioN", + "uid": "github/dwkim78/upsilon", + "url": "https://github.com/dwkim78/upsilon", + "rel": "/software/repository/github/dwkim78/upsilon", + "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", + "description": "Automated Classification of Periodic Variable Stars Using Machine Learning", "topics": [] }, { - "uid": "github/seap-udea/iWander", - "url": "https://github.com/seap-udea/iWander", - "rel": "/software/repository/github/seap-udea/iWander", - "avatar": "https://avatars.githubusercontent.com/u/11349479?v=4", - "description": "Dynamics of Interstellar Wanderers", + "uid": "github/dwkim78/pdtrend", + "url": "https://github.com/dwkim78/pdtrend", + "rel": "/software/repository/github/dwkim78/pdtrend", + "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", + "description": "Photometric Detrending Algorithm", "topics": [] }, { - "uid": "github/524D/compareMS2", - "url": "https://github.com/524D/compareMS2", - "rel": "/software/repository/github/524D/compareMS2", - "avatar": "https://avatars.githubusercontent.com/u/50015273?v=4", - "description": "Compare samples by MS2 spectra", + "uid": "github/dwkim78/ASTRiDE", + "url": "https://github.com/dwkim78/ASTRiDE", + "rel": "/software/repository/github/dwkim78/ASTRiDE", + "avatar": "https://avatars.githubusercontent.com/u/7696163?v=4", + "description": "AUTOMATED STREAK DETECTION FOR ASTRONOMICAL IMAGES", "topics": [] }, { - "uid": "github/JoschaJ/mockFRBhosts", - "url": "https://github.com/JoschaJ/mockFRBhosts", - "rel": "/software/repository/github/JoschaJ/mockFRBhosts", - "avatar": "https://avatars.githubusercontent.com/u/49990506?v=4", - "description": null, - "topics": [] + "uid": "github/AnkitBarik/planetMagFields", + "url": "https://github.com/AnkitBarik/planetMagFields", + "rel": "/software/repository/github/AnkitBarik/planetMagFields", + "avatar": "https://avatars.githubusercontent.com/u/13730345?v=4", + "description": "Routines to plot magnetic fields of planets in our solar system", + "topics": [ + "plotting", + "planetary-science", + "magnetic-fields", + "planetary-data", + "planetary", + "python", + "matplotlib" + ] }, { - "uid": "github/GeodynamicWorldBuilder/WorldBuilder", - "url": "https://github.com/GeodynamicWorldBuilder/WorldBuilder", - "rel": "/software/repository/github/GeodynamicWorldBuilder/WorldBuilder", - "avatar": "https://avatars.githubusercontent.com/u/40909724?v=4", - "description": "World Builder: An initial conditions generator for geodynamic modeling", - "topics": [] + "uid": "github/JuliaOpt/JuMP.jl", + "url": "https://github.com/jump-dev/JuMP.jl", + "rel": "/software/repository/github/JuliaOpt/JuMP.jl", + "avatar": "https://avatars3.githubusercontent.com/u/48496332?v=4", + "description": "Modeling language for Mathematical Optimization (linear, mixed-integer, conic, semidefinite, nonlinear)", + "topics": [ + "optimization", + "julia", + "modeling-language" + ] }, { - "uid": "github/BioinformaticsPlatformWIV-ISP/PACU", - "url": "https://github.com/BioinformaticsPlatformWIV-ISP/PACU", - "rel": "/software/repository/github/BioinformaticsPlatformWIV-ISP/PACU", - "avatar": "https://avatars.githubusercontent.com/u/18479046?v=4", - "description": "Workflow for whole genome sequencing based phylogeny of Illumina and ONT R9/R10 data.", - "topics": [] + "uid": "github/steineggerlab/foldmason", + "url": "https://github.com/steineggerlab/foldmason", + "rel": "/software/repository/github/steineggerlab/foldmason", + "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4", + "description": "Multiple Protein Structure Alignment at Scale with FoldMason", + "topics": [ + "bioinformatics", + "msa", + "protein-structure" + ] }, { - "uid": "github/GOALS-survey/CAFE", - "url": "https://github.com/GOALS-survey/CAFE", - "rel": "/software/repository/github/GOALS-survey/CAFE", - "avatar": "https://avatars.githubusercontent.com/u/121973992?v=4", - "description": "Spectral decomposition that works for astronomical data", - "topics": [] + "uid": "github/steineggerlab/foldseek", + "url": "https://github.com/steineggerlab/foldseek", + "rel": "/software/repository/github/steineggerlab/foldseek", + "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4", + "description": "Foldseek enables fast and sensitive comparisons of large structure sets.", + "topics": [ + "protein-structure", + "alignments" + ] }, { - "uid": "github/apaolillo/pythainer", - "url": "https://github.com/apaolillo/pythainer", - "rel": "/software/repository/github/apaolillo/pythainer", - "avatar": "https://avatars.githubusercontent.com/u/4931290?v=4", - "description": "A pythonic toolkit for composing, managing, and deploying Docker images and containers.", - "topics": [] + "uid": "github/steineggerlab/Metabuli", + "url": "https://github.com/steineggerlab/Metabuli", + "rel": "/software/repository/github/steineggerlab/Metabuli", + "avatar": "https://avatars.githubusercontent.com/u/62094016?v=4", + "description": "Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.", + "topics": [ + "bioinformatics", + "k-mer", + "metagenomics", + "taxonomic-classification", + "taxonomy" + ] }, { - "uid": "github/jaimedelacruz/stic", - "url": "https://github.com/jaimedelacruz/stic", - "rel": "/software/repository/github/jaimedelacruz/stic", - "avatar": "https://avatars.githubusercontent.com/u/6310224?v=4", - "description": "The Stockholm inversion code", + "uid": "github/ydLiu-HIT/deSALT", + "url": "https://github.com/ydLiu-HIT/deSALT", + "rel": "/software/repository/github/ydLiu-HIT/deSALT", + "avatar": "https://avatars.githubusercontent.com/u/27715065?v=4", + "description": "deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads", "topics": [] }, { - "uid": "github/openmsi/openmsistream", - "url": "https://github.com/openmsi/openmsistream", - "rel": "/software/repository/github/openmsi/openmsistream", - "avatar": "https://avatars.githubusercontent.com/u/67872608?v=4", - "description": "Materials data streaming applications, written in Python using Apache Kafka, with a focus on deployment in laboratory environments", + "uid": "github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", + "url": "https://github.com/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", + "rel": "/software/repository/github/Munroe-Meyer-Institute-VR-Laboratory/Biosensor-Framework", + "avatar": "https://avatars.githubusercontent.com/u/81440794?v=4", + "description": "C# library that handles the full process of gathering biometric data from a body-worn sensor, transforming it into handcrafted feature vectors, and delivering an inferencing result in thirty-five lines of code. ", + "topics": [ + "affective-computing", + "wesad", + "microsoft-ml", + "empatica-e4" + ] + }, + { + "uid": "github/conda-forge/conda-smithy", + "url": "https://github.com/conda-forge/conda-smithy", + "rel": "/software/repository/github/conda-forge/conda-smithy", + "avatar": "https://avatars3.githubusercontent.com/u/11897326?v=4", + "description": "The tool for managing conda-forge feedstocks.", "topics": [] }, { - "uid": "github/rauschenberger/joinet", - "url": "https://github.com/rauschenberger/joinet", - "rel": "/software/repository/github/rauschenberger/joinet", - "avatar": "https://avatars.githubusercontent.com/u/14272654?v=4", - "description": "Multivariate Elastic Net Regression", + "uid": "github/benopp99/DPMhalo", + "url": "https://github.com/benopp99/DPMhalo", + "rel": "/software/repository/github/benopp99/DPMhalo", + "avatar": "https://avatars.githubusercontent.com/u/50880489?v=4", + "description": "The Descriptive Parametric Model", "topics": [] }, { - "uid": "github/rauschenberger/transreg", - "url": "https://github.com/rauschenberger/transreg", - "rel": "/software/repository/github/rauschenberger/transreg", - "avatar": "https://avatars.githubusercontent.com/u/14272654?v=4", - "description": "Transfer learning", - "topics": [] + "uid": "github/pvlib/pvlib-python", + "url": "https://github.com/pvlib/pvlib-python", + "rel": "/software/repository/github/pvlib/pvlib-python", + "avatar": "https://avatars3.githubusercontent.com/u/11037261?v=4", + "description": "A set of documented functions for simulating the performance of photovoltaic energy systems.", + "topics": [ + "solar-energy", + "python", + "renewable-energy", + "renewables", + "photovoltaic" + ] }, { - "uid": "github/ranieremenezes/easyFermi", - "url": "https://github.com/ranieremenezes/easyFermi", - "rel": "/software/repository/github/ranieremenezes/easyFermi", - "avatar": "https://avatars.githubusercontent.com/u/14879409?v=4", - "description": "The easiest way to analyze Fermi-LAT data", + "uid": "github/JFFleming/RCFV_Reader", + "url": "https://github.com/JFFleming/RCFV_Reader", + "rel": "/software/repository/github/JFFleming/RCFV_Reader", + "avatar": "https://avatars.githubusercontent.com/u/84772413?v=4", + "description": "RCFV reader is a new software to quickly calculate normalised relative compositional frequency variability.", "topics": [] }, { - "uid": "github/ranieremenezes/easyspec", - "url": "https://github.com/ranieremenezes/easyspec", - "rel": "/software/repository/github/ranieremenezes/easyspec", - "avatar": "https://avatars.githubusercontent.com/u/14879409?v=4", - "description": "The easiest way to do long-slit optical spectroscopy", + "uid": "github/TearsWaiting/MIMML", + "url": "https://github.com/TearsWaiting/MIMML", + "rel": "/software/repository/github/TearsWaiting/MIMML", + "avatar": "https://avatars.githubusercontent.com/u/45462505?v=4", + "description": "The implement of MIMML in paper: Accelerating Bioactive Peptides Discovery via Mutual Information based Meta-learning", "topics": [] }, { - "uid": "github/USEPA/nsink", - "url": "https://github.com/USEPA/nsink", - "rel": "/software/repository/github/USEPA/nsink", - "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", - "description": null, - "topics": [ - "ord" - ] + "uid": "github/JASHunt/Snapdragons", + "url": "https://github.com/JASHunt/Snapdragons", + "rel": "/software/repository/github/JASHunt/Snapdragons", + "avatar": "https://avatars.githubusercontent.com/u/17595585?v=4", + "description": "Snapdragons population synthesis & mock survey data generation code ", + "topics": [] }, { - "uid": "github/USEPA/harmonize-wq", - "url": "https://github.com/USEPA/harmonize-wq", - "rel": "/software/repository/github/USEPA/harmonize-wq", - "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", - "description": "Standardize, clean, and wrangle Water Quality Portal data into more analytic-ready formats", - "topics": [ - "ord" - ] + "uid": "github/archaeo-pteryx/PowerSpecCovFFT", + "url": "https://github.com/archaeo-pteryx/PowerSpecCovFFT", + "rel": "/software/repository/github/archaeo-pteryx/PowerSpecCovFFT", + "avatar": "https://avatars.githubusercontent.com/u/16079514?v=4", + "description": "FFTLog-based computation of non-Gaussian analytic covariance of galaxy power spectrum multipoles ", + "topics": [] }, { - "uid": "github/USEPA/peat", - "url": "https://github.com/USEPA/peat", - "rel": "/software/repository/github/USEPA/peat", - "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", - "description": null, + "uid": "github/aewallin/allantools", + "url": "https://github.com/aewallin/allantools", + "rel": "/software/repository/github/aewallin/allantools", + "avatar": "https://avatars.githubusercontent.com/u/909509?v=4", + "description": "Allan deviation and related time & frequency statistics library in Python", "topics": [] }, { - "uid": "github/USEPA/MCSimMod", - "url": "https://github.com/USEPA/MCSimMod", - "rel": "/software/repository/github/USEPA/MCSimMod", - "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", - "description": "MCSim Models in R", - "topics": [ - "ode-model", - "pbpk", - "pbpk-modeling", - "r", - "ode" - ] + "uid": "github/jacobmerson/model-traits", + "url": "https://github.com/jacobmerson/model-traits", + "rel": "/software/repository/github/jacobmerson/model-traits", + "avatar": "https://avatars.githubusercontent.com/u/2366140?v=4", + "description": "simple library for dealing with simulation boundary conditions", + "topics": [] }, { - "uid": "github/USEPA/SSN2", - "url": "https://github.com/USEPA/SSN2", - "rel": "/software/repository/github/USEPA/SSN2", - "avatar": "https://avatars.githubusercontent.com/u/1304320?v=4", - "description": "SSN2: Spatial Modeling on Stream Networks in R", + "uid": "github/Ashod/garli", + "url": "https://github.com/Ashod/garli", + "rel": "/software/repository/github/Ashod/garli", + "avatar": "https://avatars.githubusercontent.com/u/746119?v=4", + "description": "Phylogenetic analysis of molecular sequence data using the maximum-likelihood criterion", "topics": [] }, { - "uid": "github/tolkit/telomeric-identifier", - "url": "https://github.com/tolkit/telomeric-identifier", - "rel": "/software/repository/github/tolkit/telomeric-identifier", - "avatar": "https://avatars.githubusercontent.com/u/67783554?v=4", - "description": "Identify and find telomeres, or telomeric repeats in a genome.", + "uid": "github/wtraylor/modular_megafauna_model", + "url": "https://github.com/wtraylor/modular_megafauna_model", + "rel": "/software/repository/github/wtraylor/modular_megafauna_model", + "avatar": "https://avatars.githubusercontent.com/u/32058827?v=4", + "description": "Extendable, dynamic, process-based herbivore simulator that can be integrated into a dynamic vegetation model. Written as a C++ library.", "topics": [ - "genome", - "rust", - "telomere", - "repeats", - "telomeric", - "telomeres", - "bioinformatics" + "herbivores", + "dgvm", + "ecosystem-model", + "mammoth" ] }, { - "uid": "github/ElucidataInc/ElMaven", - "url": "https://github.com/ElucidataInc/ElMaven", - "rel": "/software/repository/github/ElucidataInc/ElMaven", - "avatar": "https://avatars.githubusercontent.com/u/22674262?v=4", - "description": "LC-MS data processing tool for large-scale metabolomics experiments.", - "topics": [ - "metabolomics", - "mass-spectrometry", - "lc-ms", - "qt", - "c-plus-plus", - "lc-msms" - ] + "uid": "github/EnsembleGovServices/kamodo-core", + "url": "https://github.com/EnsembleGovServices/kamodo-core", + "rel": "/software/repository/github/EnsembleGovServices/kamodo-core", + "avatar": "https://avatars.githubusercontent.com/u/73653894?v=4", + "description": "A functional API for space weather models and data", + "topics": [] }, { - "uid": "github/algolab/shark", - "url": "https://github.com/AlgoLab/shark", - "rel": "/software/repository/github/algolab/shark", - "avatar": "https://avatars.githubusercontent.com/u/449800?v=4", - "description": "Mapping-free software for fishing relevant reads in an RNA-Seq sample", + "uid": "github/3top1a/biotools-linter", + "url": "https://github.com/3top1a/biotools-linter", + "rel": "/software/repository/github/3top1a/biotools-linter", + "avatar": "https://avatars.githubusercontent.com/u/57371001?v=4", + "description": "This website serves to help bio.tools database editors and maintainers help with data quality by searching for common quantifiable errors.", "topics": [ - "bioinformatics", - "rna-seq", - "alignment-free", - "filtering" + "biotools", + "linter" ] }, { - "uid": "github/BioHPC/MegaD", - "url": "https://github.com/BioHPC/MegaD", - "rel": "/software/repository/github/BioHPC/MegaD", - "avatar": "https://avatars.githubusercontent.com/u/15250025?v=4", - "description": "Deep learning for metagenomic sample classification", + "uid": "github/VasilyKokorev/stardust", + "url": "https://github.com/VasilyKokorev/stardust", + "rel": "/software/repository/github/VasilyKokorev/stardust", + "avatar": "https://avatars.githubusercontent.com/u/45940362?v=4", + "description": "Stardust - SED fitting code for UV-optical and FIR.", "topics": [] }, { - "uid": "github/mslonina/Mechanic", - "url": "https://github.com/mslonina/Mechanic", - "rel": "/software/repository/github/mslonina/Mechanic", - "avatar": "https://avatars.githubusercontent.com/u/557634?v=4", - "description": "The MPI/HDF code framework and task management system", + "uid": "github/RomainFeron/mwga-utils", + "url": "https://github.com/RomainFeron/mwga-utils", + "rel": "/software/repository/github/RomainFeron/mwga-utils", + "avatar": "https://avatars.githubusercontent.com/u/14352967?v=4", + "description": "Collection of utilities for processing Multispecies Whole Genome Alignments ", "topics": [] }, { - "uid": "github/idptools/metapredict", - "url": "https://github.com/idptools/metapredict", - "rel": "/software/repository/github/idptools/metapredict", - "avatar": "https://avatars.githubusercontent.com/u/67078335?v=4", - "description": "A machine learning based protein disorder predictor.", + "uid": "github/karpov-sv/stdweb", + "url": "https://github.com/karpov-sv/stdweb", + "rel": "/software/repository/github/karpov-sv/stdweb", + "avatar": "https://avatars.githubusercontent.com/u/6555548?v=4", + "description": "STDWeb - Simple Transient Detection for the Web", "topics": [] }, { - "uid": "github/szymon-datalions/pyinterpolate", - "url": "https://github.com/DataverseLabs/pyinterpolate", - "rel": "/software/repository/github/szymon-datalions/pyinterpolate", - "avatar": "https://avatars.githubusercontent.com/u/84904952?v=4", - "description": "Package with spatial analysis and spatial prediction tools", + "uid": "github/edbiomedai/scmorph", + "url": "https://github.com/edbiomedai/scmorph", + "rel": "/software/repository/github/edbiomedai/scmorph", + "avatar": "https://avatars.githubusercontent.com/u/109510523?v=4", + "description": "Single-cell morphological analysis", "topics": [ - "kriging", - "semivariogram", - "spatial-interpolation", - "spatial-analysis", - "poisson-kriging", - "hacktoberfest", - "python", - "machine-learning" + "high-content", + "morphological-profiling", + "single-cell" ] }, { - "uid": "github/mlafarga/raccoon", - "url": "https://github.com/mlafarga/raccoon", - "rel": "/software/repository/github/mlafarga/raccoon", - "avatar": "https://avatars.githubusercontent.com/u/20257371?v=4", + "uid": "github/riogroup/SORA", + "url": "https://github.com/riogroup/SORA", + "rel": "/software/repository/github/riogroup/SORA", + "avatar": "https://avatars.githubusercontent.com/u/64388000?v=4", "description": null, "topics": [] }, { - "uid": "github/NicolasHug/Surprise", - "url": "https://github.com/NicolasHug/Surprise", - "rel": "/software/repository/github/NicolasHug/Surprise", - "avatar": "https://avatars2.githubusercontent.com/u/1190450?v=4", - "description": "A Python scikit for building and analyzing recommender systems", + "uid": "github/NBISweden/AGAT", + "url": "https://github.com/NBISweden/AGAT", + "rel": "/software/repository/github/NBISweden/AGAT", + "avatar": "https://avatars.githubusercontent.com/u/1224807?v=4", + "description": "Another Gtf/Gff Analysis Toolkit", "topics": [ - "recommender", - "systems", - "recommendation", - "svd", - "matrix", - "factorization" + "agat", + "gff", + "perl-scripts", + "gtf", + "standardisation", + "gff-format", + "toolkit" ] }, { - "uid": "github/odlomax/spamcart-dev", - "url": "https://github.com/odlomax/spamcart-dev", - "rel": "/software/repository/github/odlomax/spamcart-dev", - "avatar": "https://avatars.githubusercontent.com/u/20695114?v=4", - "description": "Development repository for SPAMCART radiative transfer code", - "topics": [] - }, - { - "uid": "github/SolavLab/DuoDIC", - "url": "https://github.com/SolavLab/DuoDIC", - "rel": "/software/repository/github/SolavLab/DuoDIC", - "avatar": "https://avatars.githubusercontent.com/u/95631074?v=4", - "description": "Stereo 3D Digital Image Correlation (3D-DIC) MATLAB toolbox", - "topics": [] - }, - { - "uid": "github/Julian-Sommer/chen-dai-2025-lightcurve-model", - "url": "https://github.com/Julian-Sommer/chen-dai-2025-lightcurve-model", - "rel": "/software/repository/github/Julian-Sommer/chen-dai-2025-lightcurve-model", - "avatar": "https://avatars.githubusercontent.com/u/65716879?v=4", - "description": "This code generates lightcurves based on the theoretical model of electromagnetic counterparts of BBH mergers embedded in AGN disks from Chen & Dai (2025), ApJ, 987, 214.", + "uid": "github/ICSC-Spoke3/NP_TMcode", + "url": "https://github.com/ICSC-Spoke3/NP_TMcode", + "rel": "/software/repository/github/ICSC-Spoke3/NP_TMcode", + "avatar": "https://avatars.githubusercontent.com/u/156100237?v=4", + "description": null, "topics": [] }, { - "uid": "github/mphowardlab/lammpsio", - "url": "https://github.com/mphowardlab/lammpsio", - "rel": "/software/repository/github/mphowardlab/lammpsio", - "avatar": "https://avatars.githubusercontent.com/u/64987711?v=4", - "description": "Python tools for working with LAMMPS files", + "uid": "github/matthias-mayr/Cartesian-Impedance-Controller", + "url": "https://github.com/matthias-mayr/Cartesian-Impedance-Controller", + "rel": "/software/repository/github/matthias-mayr/Cartesian-Impedance-Controller", + "avatar": "https://avatars.githubusercontent.com/u/64466074?v=4", + "description": "A C++ implementation of Cartesian impedance control for torque-controlled manipulators with ROS bindings.", "topics": [ - "python", - "lammps", - "molecular-dynamics" + "franka-emika", + "franka-panda", + "gazebo", + "iiwa", + "kuka-iiwa", + "kuka-lbr-iiwa", + "manipulators", + "robotics", + "ros", + "compliant-control" ] }, { - "uid": "github/SMTG-UCL/surfaxe", - "url": "https://github.com/SMTG-UCL/surfaxe", - "rel": "/software/repository/github/SMTG-UCL/surfaxe", - "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", - "description": "Dealing with slabs for first principles calculations of surfaces", + "uid": "github/GOBLIN-Proj/goblin_lite", + "url": "https://github.com/GOBLIN-Proj/goblin_lite", + "rel": "/software/repository/github/GOBLIN-Proj/goblin_lite", + "avatar": "https://avatars.githubusercontent.com/u/164409538?v=4", + "description": "A goblin tool for the generation of static land balance scenarios and environment", "topics": [ - "python3", - "science", - "computational-chemistry", - "materials", - "surfaces", - "pymatgen", - "vasp" + "goblin" ] }, { - "uid": "github/SMTG-UCL/ShakeNBreak", - "url": "https://github.com/SMTG-UCL/ShakeNBreak", - "rel": "/software/repository/github/SMTG-UCL/ShakeNBreak", - "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", - "description": "Defect structure-searching method employing chemically-guided bond distortions to locate ground-state and metastable structures of point defects in solid materials.", + "uid": "github/lionandjelka/QhX1", + "url": "https://github.com/lionandjelka/QhX1", + "rel": "/software/repository/github/lionandjelka/QhX1", + "avatar": "https://avatars.githubusercontent.com/u/7264975?v=4", + "description": "QhX-Quasar harmonics eXplorer- Python package for detecting oscillations in red noise", + "topics": [] + }, + { + "uid": "github/tnakazato/priism", + "url": "https://github.com/tnakazato/priism", + "rel": "/software/repository/github/tnakazato/priism", + "avatar": "https://avatars.githubusercontent.com/u/17893104?v=4", + "description": "PRIISM: Python Module for Radio Interferometry Imaging with Sparse Modeling", + "topics": [] + }, + { + "uid": "github/bowang-lab/scGPT", + "url": "https://github.com/bowang-lab/scGPT", + "rel": "/software/repository/github/bowang-lab/scGPT", + "avatar": "https://avatars.githubusercontent.com/u/50999261?v=4", + "description": "scGPT is a foundation model for Single-Cell Multi-omics using generative AI. scGPT can be optimized to achieve superior performance across diverse downstream applications such as cell type annotation, multi-batch integration, multi-omic integration, perturbation response prediction and gene network inference", "topics": [ - "materials", - "materials-informatics", - "point-defects", - "science", - "computational-chemistry", - "pymatgen", - "python3", - "symmetry-breaking", - "structure-searching", - "vasp", - "distortions", - "ab-initio", - "dft", - "materials-design", - "semiconductors" + "foundation-model", + "gpt", + "single-cell" ] }, { - "uid": "github/NikolayOskolkov/MCWorkflow", - "url": "https://github.com/NikolayOskolkov/MCWorkflow", - "rel": "/software/repository/github/NikolayOskolkov/MCWorkflow", - "avatar": "https://avatars.githubusercontent.com/u/49948664?v=4", - "description": null, + "uid": "github/c-martinez/BeyondTheBook", + "url": "https://github.com/c-martinez/BeyondTheBook", + "rel": "/software/repository/github/c-martinez/BeyondTheBook", + "avatar": "https://avatars3.githubusercontent.com/u/7782231?v=4", + "description": "Using Wikipedia to assess the translatability of text.", "topics": [] }, { - "uid": "github/tinawunderlich/MultichannelGPR", - "url": "https://github.com/tinawunderlich/MultichannelGPR", - "rel": "/software/repository/github/tinawunderlich/MultichannelGPR", - "avatar": "https://avatars.githubusercontent.com/u/61414307?v=4", - "description": "A collection of MATLAB scripts for proccesing and visualization of (Multichannel) GPR data", + "uid": "github/ElsevierSoftwareX/SOFTX_2020_119", + "url": "https://github.com/ElsevierSoftwareX/SOFTX_2020_119", + "rel": "/software/repository/github/ElsevierSoftwareX/SOFTX_2020_119", + "avatar": "https://avatars.githubusercontent.com/u/10198119?v=4", + "description": "Python/Octave wrapper generation for LALSuite", "topics": [] }, { - "uid": "github/smoh/kinesis", - "url": "https://github.com/smoh/kinesis", - "rel": "/software/repository/github/smoh/kinesis", - "avatar": "https://avatars.githubusercontent.com/u/1384435?v=4", - "description": "kinematic modelling of clusters with gaia", + "uid": "github/morisUtokyo/uTR", + "url": "https://github.com/morisUtokyo/uTR", + "rel": "/software/repository/github/morisUtokyo/uTR", + "avatar": "https://avatars.githubusercontent.com/u/30250204?v=4", + "description": "Detect key Units in mosaic Tandem Repeats from representative reads from the same locus ", "topics": [] }, { - "uid": "github/SchlossLab/mikropml", - "url": "https://github.com/SchlossLab/mikropml", - "rel": "/software/repository/github/SchlossLab/mikropml", - "avatar": "https://avatars.githubusercontent.com/u/7229330?v=4", - "description": "User-Friendly R Package for Supervised Machine Learning Pipelines", - "topics": [ - "machine-learning", - "r-package", - "rstats" - ] + "uid": "github/Mik3M4n/BaCoN", + "url": "https://github.com/Mik3M4n/BaCoN", + "rel": "/software/repository/github/Mik3M4n/BaCoN", + "avatar": "https://avatars.githubusercontent.com/u/38292755?v=4", + "description": "BAyesian COsmological Network - a bayesian neural network for classification of dark energy/modified gravity power spectra", + "topics": [] }, { - "uid": "github/numpy/numpy", - "url": "https://github.com/numpy/numpy", - "rel": "/software/repository/github/numpy/numpy", - "avatar": "https://avatars2.githubusercontent.com/u/288276?v=4", - "description": "The fundamental package for scientific computing with Python.", - "topics": [ - "numpy", - "python" - ] + "uid": "github/Mik3M4n/EF-TIGRE", + "url": "https://github.com/Mik3M4n/EF-TIGRE", + "rel": "/software/repository/github/Mik3M4n/EF-TIGRE", + "avatar": "https://avatars.githubusercontent.com/u/38292755?v=4", + "description": "Effective Field Theory of Interacting dark energy with Gravitational REdshift", + "topics": [] }, { - "uid": "github/nedtaylor/athena", - "url": "https://github.com/nedtaylor/athena", - "rel": "/software/repository/github/nedtaylor/athena", - "avatar": "https://avatars.githubusercontent.com/u/71959356?v=4", - "description": "A Fortran-based feed-forward neural network library. Whilst this library currently has a focus on 3D convolutional neural networks (CNNs), it can handle most standard hidden layer forms of neural networks, with the plan to integrate more.", - "topics": [ - "convolution", - "feed-forward-neural-networks", - "fortran", - "machine-learning", - "neural-network", - "convolutional-neural-networks", - "cnn" - ] + "uid": "github/tony-travis/PIQUE", + "url": "https://github.com/tony-travis/PIQUE", + "rel": "/software/repository/github/tony-travis/PIQUE", + "avatar": "https://avatars.githubusercontent.com/u/4498665?v=4", + "description": "Parallel Identification of QTL's Using EMMAX", + "topics": [] }, { - "uid": "github/sumn2u/annotate-lab", - "url": "https://github.com/sumn2u/annotate-lab", - "rel": "/software/repository/github/sumn2u/annotate-lab", - "avatar": "https://avatars.githubusercontent.com/u/6531541?v=4", - "description": "Annotate-lab is an open-source image annotation tool for efficient dataset creation. With an intuitive interface and flexible export options, it streamlines your machine learning workflow. \ud83d\uddbc\ufe0f\u270f\ufe0f\ud83d\udcd1", + "uid": "github/dmitryduev/penquins", + "url": "https://github.com/dmitryduev/penquins", + "rel": "/software/repository/github/dmitryduev/penquins", + "avatar": "https://avatars.githubusercontent.com/u/7557205?v=4", + "description": "A python client for Kowalski", "topics": [ - "annotation-tool", - "image-annotation", - "image-labeling", - "image-segmentation", - "collaborate", - "computer-vision", - "machine-learning", - "classification", - "image-masking", - "segmentation", - "python", - "react" + "kowalski", + "python-client", + "ztf", + "ztf-ii" ] }, { - "uid": "github/shilpagarg/WHdenovo", - "url": "https://github.com/shilpagarg/WHdenovo", - "rel": "/software/repository/github/shilpagarg/WHdenovo", - "avatar": "https://avatars2.githubusercontent.com/u/7416551?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/VIRAC-SPACE/Automatic_Correlation_information_system", - "url": "https://github.com/VIRAC-SPACE/Automatic_Correlation_information_system", - "rel": "/software/repository/github/VIRAC-SPACE/Automatic_Correlation_information_system", - "avatar": "https://avatars.githubusercontent.com/u/126678283?v=4", - "description": null, + "uid": "github/TeamCOMPAS/COMPAS", + "url": "https://github.com/TeamCOMPAS/COMPAS", + "rel": "/software/repository/github/TeamCOMPAS/COMPAS", + "avatar": "https://avatars.githubusercontent.com/u/22152683?v=4", + "description": "COMPAS rapid binary population synthesis code", "topics": [] }, { - "uid": "github/elsoroka/Satisfiability.jl", - "url": "https://github.com/elsoroka/Satisfiability.jl", - "rel": "/software/repository/github/elsoroka/Satisfiability.jl", - "avatar": "https://avatars.githubusercontent.com/u/14230800?v=4", - "description": "Specify satisfiability modulo theories problems in Julia and use the SMT-LIB format to interact with SMT solvers.", - "topics": [ - "satisfiability-modulo-theories", - "smt-lib" - ] + "uid": "github/GeoffDuniam/FITS-Code-Examples", + "url": "https://github.com/GeoffDuniam/FITS-Code-Examples", + "rel": "/software/repository/github/GeoffDuniam/FITS-Code-Examples", + "avatar": "https://avatars.githubusercontent.com/u/7960786?v=4", + "description": "Jupyter notes books and code examples for the FITS data modelling paper", + "topics": [] }, { - "uid": "github/alphapsa/PIPE", - "url": "https://github.com/alphapsa/PIPE", - "rel": "/software/repository/github/alphapsa/PIPE", - "avatar": "https://avatars.githubusercontent.com/u/13644798?v=4", - "description": "PSF Imagette Photometric Extraction - PSF photometry for CHEOPS data", + "uid": "github/jpahlers/LASR", + "url": "https://github.com/jpahlers/LASR", + "rel": "/software/repository/github/jpahlers/LASR", + "avatar": "https://avatars.githubusercontent.com/u/38013473?v=4", + "description": "Code and dependencies for the Linear Algorithm for Significance Reduction, developed by various members of the University of Idaho's Department of Physics.", "topics": [] }, { - "uid": "github/goshng/polap", - "url": "https://github.com/goshng/polap", - "rel": "/software/repository/github/goshng/polap", - "avatar": "https://avatars.githubusercontent.com/u/478173?v=4", - "description": "Polap is a plant mtDNA assembly pipeline using Flye long-read assembler guided by organelle gene annotation.", + "uid": "github/broadinstitute/wot", + "url": "https://github.com/broadinstitute/wot", + "rel": "/software/repository/github/broadinstitute/wot", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "A software package for analyzing snapshots of developmental processes", "topics": [ - "genome-annotation", - "genome-assembly", - "mitochondrial-genomes", - "plant" + "single-cell", + "rna-seq", + "time-series", + "trajectory", + "optimal-transport" ] }, { - "uid": "github/txopen/histoc", - "url": "https://github.com/txopen/histoc", - "rel": "/software/repository/github/txopen/histoc", - "avatar": "https://avatars.githubusercontent.com/u/107883455?v=4", - "description": "Histocompatibility analysis performed by kidney allocation systems for transplantation", - "topics": [] - }, - { - "uid": "github/HajimeKawahara/exojax", - "url": "https://github.com/HajimeKawahara/exojax", - "rel": "/software/repository/github/HajimeKawahara/exojax", - "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", - "description": "\ud83d\udc08 Automatic differentiable spectrum modeling of exoplanets/brown dwarfs using JAX, compatible with NumPyro and JAXopt", + "uid": "github/broadinstitute/tensorqtl", + "url": "https://github.com/broadinstitute/tensorqtl", + "rel": "/software/repository/github/broadinstitute/tensorqtl", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "Ultrafast GPU-enabled QTL mapper", "topics": [] }, { - "uid": "github/HajimeKawahara/juwvid", - "url": "https://github.com/HajimeKawahara/juwvid", - "rel": "/software/repository/github/HajimeKawahara/juwvid", - "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", - "description": "Julia code for the time-frequency analysis", + "uid": "github/broadinstitute/picard", + "url": "https://github.com/broadinstitute/picard", + "rel": "/software/repository/github/broadinstitute/picard", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "A set of command line tools (in Java) for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.", "topics": [] }, { - "uid": "github/HajimeKawahara/sot", - "url": "https://github.com/HajimeKawahara/sot", - "rel": "/software/repository/github/HajimeKawahara/sot", - "avatar": "https://avatars.githubusercontent.com/u/15956904?v=4", - "description": "Python package for taking a photo and movie of an exo Earth", + "uid": "github/broadinstitute/Drop-seq", + "url": "https://github.com/broadinstitute/Drop-seq", + "rel": "/software/repository/github/broadinstitute/Drop-seq", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "Java tools for analyzing Drop-seq data", "topics": [] }, { - "uid": "github/morphometry/papaya2", - "url": "https://github.com/morphometry/papaya2", - "rel": "/software/repository/github/morphometry/papaya2", - "avatar": "https://avatars1.githubusercontent.com/u/48016973?v=4", - "description": "compute 2D irreducible Minkowski tensors", + "uid": "github/broadinstitute/CellBender", + "url": "https://github.com/broadinstitute/CellBender", + "rel": "/software/repository/github/broadinstitute/CellBender", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "a software package for eliminating technical artifacts from high-throughput single-cell RNA sequencing (scRNA-seq) data.", "topics": [] }, { - "uid": "github/xcompact3d/Incompact3d", - "url": "https://github.com/xcompact3d/Incompact3d", - "rel": "/software/repository/github/xcompact3d/Incompact3d", - "avatar": "https://avatars.githubusercontent.com/u/37588006?v=4", - "description": "New version of our solver for the incompressible Navier-Stokes equations", + "uid": "github/broadinstitute/gatk", + "url": "https://github.com/broadinstitute/gatk", + "rel": "/software/repository/github/broadinstitute/gatk", + "avatar": "https://avatars.githubusercontent.com/u/393552?v=4", + "description": "Official code repository for GATK versions 4 and up", "topics": [ - "navier-stokes", - "computational-fluid-dynamics", - "cfd", - "direct-numerical-simulation", - "large-eddy-simulation" + "genomics", + "spark", + "science", + "dna", + "ngs", + "sequencing", + "genome", + "bioinformatics", + "gatk" ] }, { - "uid": "github/valentineap/pyprop8", - "url": "https://github.com/valentineap/pyprop8", - "rel": "/software/repository/github/valentineap/pyprop8", - "avatar": "https://avatars.githubusercontent.com/u/4602811?v=4", - "description": "A lightweight Python code to calculate the seismic response of a layered half-space (including static components), and derivatives of the wavefield wrt source components.", - "topics": [] + "uid": "github/broadinstitute/cromwell", + "url": "https://github.com/broadinstitute/cromwell", + "rel": "/software/repository/github/broadinstitute/cromwell", + "avatar": "https://avatars0.githubusercontent.com/u/393552?v=4", + "description": "Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments", + "topics": [ + "workflow-execution", + "workflow", + "cloud", + "hpc", + "bioinformatics", + "executor", + "scala", + "docker", + "ga4gh", + "containers", + "wdl", + "workflow-description-language", + "cwl", + "common-workflow-language", + "application" + ] }, { - "uid": "github/argiopetech/base", - "url": "https://github.com/argiopetech/base", - "rel": "/software/repository/github/argiopetech/base", - "avatar": "https://avatars.githubusercontent.com/u/395366?v=4", - "description": "Bayesian Analysis for Stellar Evolution", + "uid": "github/pandas-dev/pandas", + "url": "https://github.com/pandas-dev/pandas", + "rel": "/software/repository/github/pandas-dev/pandas", + "avatar": "https://avatars2.githubusercontent.com/u/21206976?v=4", + "description": "Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more", "topics": [ - "bayesian-analysis", - "mcmc", - "astronomy", - "bayesian-statistics", - "c-plus-plus" + "data-analysis", + "pandas", + "flexible", + "alignment", + "python" ] }, { - "uid": "github/tao-bioinfo/MiFish", - "url": "https://github.com/tao-bioinfo/MiFish", - "rel": "/software/repository/github/tao-bioinfo/MiFish", - "avatar": "https://avatars.githubusercontent.com/u/1146090?v=4", - "description": "This is the command line version of MiFish pipeline. It can also be used with any other eDNA meta-barcoding primers", + "uid": "github/nf-core/mag", + "url": "https://github.com/nf-core/mag", + "rel": "/software/repository/github/nf-core/mag", + "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", + "description": "Assembly and binning of metagenomes", "topics": [ - "edna", - "edna-pipeline" + "workflow", + "nextflow", + "metagenomics", + "assembly", + "binning", + "annotation", + "nf-core", + "pipeline", + "bioinformatics", + "nanopore", + "nanopore-sequencing", + "metagenomes", + "long-read-sequencing" ] }, { - "uid": "github/trevorgokey/besmarts", - "url": "https://github.com/trevorgokey/besmarts", - "rel": "/software/repository/github/trevorgokey/besmarts", - "avatar": "https://avatars.githubusercontent.com/u/50244806?v=4", - "description": "A toolkit for data-driven force field design based on binary-encoded SMARTS", + "uid": "github/nf-core/proteinfamilies", + "url": "https://github.com/nf-core/proteinfamilies", + "rel": "/software/repository/github/nf-core/proteinfamilies", + "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", + "description": "Generation and update of protein families", "topics": [ - "cheminformatics", - "smarts", - "forcefields" + "bioinformatics", + "metagenomics", + "nextflow", + "nf-core", + "pipeline", + "protein-families", + "proteomics", + "workflow" ] }, { - "uid": "github/HinodeXRT/xrtpy", - "url": "https://github.com/HinodeXRT/xrtpy", - "rel": "/software/repository/github/HinodeXRT/xrtpy", - "avatar": "https://avatars.githubusercontent.com/u/77019319?v=4", - "description": null, - "topics": [] + "uid": "github/nf-core/viralrecon", + "url": "https://github.com/nf-core/viralrecon", + "rel": "/software/repository/github/nf-core/viralrecon", + "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", + "description": "Assembly and intrahost/low-frequency variant calling for viral samples", + "topics": [ + "viral", + "metagenomics", + "amplicon", + "assembly", + "variant-calling", + "illumina", + "pipeline", + "workflow", + "nextflow", + "nf-core", + "covid-19", + "covid19", + "virus", + "sars-cov-2", + "nanopore", + "ont", + "artic", + "long-read-sequencing", + "oxford-nanopore" + ] }, { - "uid": "github/KVSlab/turtleFSI", - "url": "https://github.com/KVSlab/turtleFSI", - "rel": "/software/repository/github/KVSlab/turtleFSI", - "avatar": "https://avatars3.githubusercontent.com/u/42640986?v=4", - "description": "Monolithic Fluid-Structure Interaction (FSI) solver", - "topics": [] + "uid": "github/nf-core/airrflow", + "url": "https://github.com/nf-core/airrflow", + "rel": "/software/repository/github/nf-core/airrflow", + "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", + "description": "B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework", + "topics": [ + "b-cell", + "immcantation", + "immunorepertoire", + "repseq", + "nf-core", + "nextflow", + "workflow", + "pipeline", + "airr" + ] }, { - "uid": "github/KVSlab/VaMPy", - "url": "https://github.com/KVSlab/VaMPy", - "rel": "/software/repository/github/KVSlab/VaMPy", - "avatar": "https://avatars.githubusercontent.com/u/42640986?v=4", - "description": "A collection of tools for pre-processing, simulating, and post-processing vascular morphologies.", + "uid": "github/nf-core/sarek", + "url": "https://github.com/nf-core/sarek", + "rel": "/software/repository/github/nf-core/sarek", + "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", + "description": "Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing", "topics": [ - "vascular", + "nextflow", + "workflow", + "pipeline", + "bioinformatics", + "genomics", + "cancer", + "next-generation-sequencing", + "conda", + "reproducible-research", + "containers", + "germline", + "somatic", + "variant-calling", + "nf-core", + "gatk4", + "annotation", + "whole-genome-sequencing", + "whole-exome-sequencing", "pre-processing", - "post-processing", - "computational-fluid-dynamics" + "target-panels" ] }, { - "uid": "github/insightsengineering/rbmi", - "url": "https://github.com/insightsengineering/rbmi", - "rel": "/software/repository/github/insightsengineering/rbmi", - "avatar": "https://avatars.githubusercontent.com/u/80070020?v=4", - "description": "Reference based multiple imputation R package", + "uid": "github/lkmklsmn/DrivAER", + "url": "https://github.com/lkmklsmn/DrivAER", + "rel": "/software/repository/github/lkmklsmn/DrivAER", + "avatar": "https://avatars0.githubusercontent.com/u/11682947?v=4", + "description": "DrivAER: Identification of Driving transcriptional programs using AutoEncoder based Relevance scores", "topics": [] }, { - "uid": "github/rivasiker/PhaseTypeR", - "url": "https://github.com/rivasiker/PhaseTypeR", - "rel": "/software/repository/github/rivasiker/PhaseTypeR", - "avatar": "https://avatars.githubusercontent.com/u/54534843?v=4", - "description": "General-purpose phase-type functions", + "uid": "github/RafiKueng/SpaghettiLens", + "url": "https://github.com/RafiKueng/SpaghettiLens", + "rel": "/software/repository/github/RafiKueng/SpaghettiLens", + "avatar": "https://avatars.githubusercontent.com/u/937466?v=4", + "description": "Webbased Gravitational Lens Modelling Tool (client and server side)", "topics": [] }, { - "uid": "github/bolverk/huji-rich", - "url": "https://github.com/bolverk/huji-rich", - "rel": "/software/repository/github/bolverk/huji-rich", - "avatar": "https://avatars.githubusercontent.com/u/5267267?v=4", - "description": "A hydrodynamic simulation on a moving mesh", + "uid": "github/nvnsudharsan/SOLWEIG-GPU", + "url": "https://github.com/nvnsudharsan/SOLWEIG-GPU", + "rel": "/software/repository/github/nvnsudharsan/SOLWEIG-GPU", + "avatar": "https://avatars.githubusercontent.com/u/57706774?v=4", + "description": "SOLWEIG-GPU is a Python package and command-line interface for running the SOLWEIG (Solar and LongWave Environmental Irradiance Geometry) model on CPU or GPU (if available).", "topics": [] }, { - "uid": "github/pandegroup/openmm", - "url": "https://github.com/openmm/openmm", - "rel": "/software/repository/github/pandegroup/openmm", - "avatar": "https://avatars.githubusercontent.com/u/52428936?v=4", - "description": "OpenMM is a toolkit for molecular simulation using high performance GPU code. ", - "topics": [ - "simulation", - "molecular-dynamics" - ] - }, - { - "uid": "github/dr-joe-wirth/primerForge", - "url": "https://github.com/dr-joe-wirth/primerForge", - "rel": "/software/repository/github/dr-joe-wirth/primerForge", - "avatar": "https://avatars.githubusercontent.com/u/71667025?v=4", - "description": "software to identify primers that can distinguish genomes", + "uid": "github/dsheward-astro/pynaple", + "url": "https://github.com/dsheward-astro/PyNAPLE", + "rel": "/software/repository/github/dsheward-astro/pynaple", + "avatar": "https://avatars.githubusercontent.com/u/56971042?v=4", + "description": "Python NAC Automated Pair Lunar Evaluator", "topics": [] }, { - "uid": "github/wcoulton/CompressedFisher", - "url": "https://github.com/wcoulton/CompressedFisher", - "rel": "/software/repository/github/wcoulton/CompressedFisher", - "avatar": "https://avatars.githubusercontent.com/u/6866783?v=4", - "description": null, + "uid": "github/cnsetzer/kilopop", + "url": "https://github.com/cnsetzer/kilopop", + "rel": "/software/repository/github/cnsetzer/kilopop", + "avatar": "https://avatars.githubusercontent.com/u/32570203?v=4", + "description": "Binary neutron star (BNS) population of optical kilonovae (kNe).", "topics": [] }, { - "uid": "github/smith-chem-wisc/MetaMorpheus", - "url": "https://github.com/smith-chem-wisc/MetaMorpheus", - "rel": "/software/repository/github/smith-chem-wisc/MetaMorpheus", - "avatar": "https://avatars.githubusercontent.com/u/15989786?v=4", - "description": "Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities", - "topics": [ - "ptm", - "database-search", - "proteome", - "uniprot", - "mass-match", - "spectra", - "calibration", - "proteomics-database-search", - "discovery" - ] + "uid": "github/EddyRivasLab/infernal", + "url": "https://github.com/EddyRivasLab/infernal", + "rel": "/software/repository/github/EddyRivasLab/infernal", + "avatar": "https://avatars.githubusercontent.com/u/13962260?v=4", + "description": "RNA secondary structure/sequence profiles for homology search and alignment", + "topics": [] }, { - "uid": "github/smith-chem-wisc/ProteaseGuru", - "url": "https://github.com/smith-chem-wisc/ProteaseGuru", - "rel": "/software/repository/github/smith-chem-wisc/ProteaseGuru", - "avatar": "https://avatars.githubusercontent.com/u/15989786?v=4", - "description": null, + "uid": "github/EddyRivasLab/hmmer", + "url": "https://github.com/EddyRivasLab/hmmer", + "rel": "/software/repository/github/EddyRivasLab/hmmer", + "avatar": "https://avatars.githubusercontent.com/u/13962260?v=4", + "description": "HMMER: biological sequence analysis using profile HMMs", "topics": [] }, { - "uid": "github/RECeSS-EU-Project/stanscofi", - "url": "https://github.com/RECeSS-EU-Project/stanscofi", - "rel": "/software/repository/github/RECeSS-EU-Project/stanscofi", - "avatar": "https://avatars.githubusercontent.com/u/132160795?v=4", - "description": "Package for STANdard drug Screening by COllaborative FIltering. Performs benchmarks against datasets and SotA algorithms, and implements training, validation and testing procedures.", + "uid": "github/4dn-dcic/pairix", + "url": "https://github.com/4dn-dcic/pairix", + "rel": "/software/repository/github/4dn-dcic/pairix", + "avatar": "https://avatars.githubusercontent.com/u/23222469?v=4", + "description": "1D/2D indexing and querying on bgzipped text file with a pair of genomic coordinates", "topics": [ - "collaborative-filtering", - "drug-repurposing", - "open-science", + "hi-c", + "random-access", + "bgzip", + "bioinformatics", + "c", "python", - "science-reproducibility" + "pypairix", + "pairs" ] }, { - "uid": "github/TimothyADavis/GAStimator", - "url": "https://github.com/TimothyADavis/GAStimator", - "rel": "/software/repository/github/TimothyADavis/GAStimator", - "avatar": "https://avatars.githubusercontent.com/u/15347748?v=4", - "description": "Implementation of a Python MCMC gibbs-sampler with adaptive stepping", - "topics": [] + "uid": "github/phylo42/RAPPAS", + "url": "https://github.com/phylo42/RAPPAS", + "rel": "/software/repository/github/phylo42/RAPPAS", + "avatar": "https://avatars.githubusercontent.com/u/61278577?v=4", + "description": "Rapid, Alignment-free, Phylogenetic Placement via Ancestral Sequences", + "topics": [ + "placement", + "phylogenetic-placement", + "metagenomics", + "metabarcoding", + "phylogenetics", + "genetic-markers", + "kmers", + "phylo-kmers", + "taxonomic-classification" + ] }, { - "uid": "github/TimothyADavis/KinMSpy", - "url": "https://github.com/TimothyADavis/KinMSpy", - "rel": "/software/repository/github/TimothyADavis/KinMSpy", - "avatar": "https://avatars.githubusercontent.com/u/15347748?v=4", - "description": "A Python version of KinMS (github.com/TimothyADavis/KinMS)", + "uid": "github/phylo42/EPIK", + "url": "https://github.com/phylo42/EPIK", + "rel": "/software/repository/github/phylo42/EPIK", + "avatar": "https://avatars.githubusercontent.com/u/61278577?v=4", + "description": "Alignment-free phylogenetic placement", "topics": [] }, { - "uid": "github/biofold/ddgun", - "url": "https://github.com/biofold/ddgun", - "rel": "/software/repository/github/biofold/ddgun", - "avatar": "https://avatars.githubusercontent.com/u/15142086?v=4", - "description": "predict stability change upon mutation", + "uid": "github/LukeDuttweiler/skipTrack", + "url": "https://github.com/LukeDuttweiler/skipTrack", + "rel": "/software/repository/github/LukeDuttweiler/skipTrack", + "avatar": "https://avatars.githubusercontent.com/u/55801931?v=4", + "description": "Bayesian Hierarchical Models for Identifying Non-Adherence in Mobile Menstrual Cycle Tracking", "topics": [] }, { - "uid": "github/biofold/PhD-SNPg", - "url": "https://github.com/biofold/PhD-SNPg", - "rel": "/software/repository/github/biofold/PhD-SNPg", - "avatar": "https://avatars.githubusercontent.com/u/15142086?v=4", - "description": null, + "uid": "github/phpuech/OT_Analysis", + "url": "https://github.com/phpuech/OT_Analysis", + "rel": "/software/repository/github/phpuech/OT_Analysis", + "avatar": "https://avatars.githubusercontent.com/u/7237734?v=4", + "description": "Software for optical data force analysis / JPK Nanowizard", "topics": [] }, { - "uid": "github/jordanflitter/21cmFirstCLASS", - "url": "https://github.com/jordanflitter/21cmFirstCLASS", - "rel": "/software/repository/github/jordanflitter/21cmFirstCLASS", - "avatar": "https://avatars.githubusercontent.com/u/131596329?v=4", - "description": "This is an extension of the popular 21cmFAST code that interfaces with CLASS to generate initial conditions at recombination that are consistent with the input cosmological model", + "uid": "github/jeremiah-corrado/fem_2d", + "url": "https://github.com/jeremiah-corrado/fem_2d", + "rel": "/software/repository/github/jeremiah-corrado/fem_2d", + "avatar": "https://avatars.githubusercontent.com/u/62707311?v=4", + "description": "A rust library for 2D Finite Element Method computations", "topics": [] }, { - "uid": "github/nicokurtovic/SIMIO", - "url": "https://github.com/nicokurtovic/SIMIO", - "rel": "/software/repository/github/nicokurtovic/SIMIO", - "avatar": "https://avatars.githubusercontent.com/u/14165171?v=4", - "description": "SIMIO: from SIMulatIons to Observations", + "uid": "github/noatgnu/catapult", + "url": "https://github.com/noatgnu/catapult", + "rel": "/software/repository/github/noatgnu/catapult", + "avatar": "https://avatars.githubusercontent.com/u/16314099?v=4", + "description": "automated mass spec data search and analysis tool", "topics": [] }, { - "uid": "github/pasteurlabs/tesseract-core", - "url": "https://github.com/pasteurlabs/tesseract-core", - "rel": "/software/repository/github/pasteurlabs/tesseract-core", - "avatar": "https://avatars.githubusercontent.com/u/94583413?v=4", - "description": "Universal, autodiff-native software components for Simulation Intelligence. \ud83d\udce6", + "uid": "github/oleksulkowski/Syn-CpG-Spacer", + "url": "https://github.com/oleksulkowski/Syn-CpG-Spacer", + "rel": "/software/repository/github/oleksulkowski/Syn-CpG-Spacer", + "avatar": "https://avatars.githubusercontent.com/u/63408297?v=4", + "description": "A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides", "topics": [ - "containers", - "differentiable-programming", - "api-rest", - "automatic-differentiation", - "remote-procedure-calls", - "scientific-machine-learning" + "dinucleotide-frequencies", + "genetics", + "genome-browser", + "molecular-biology", + "virology" ] }, { - "uid": "github/phineasng/DECODE", - "url": "https://github.com/phineasng/DECODE", - "rel": "/software/repository/github/phineasng/DECODE", - "avatar": "https://avatars.githubusercontent.com/u/5710702?v=4", - "description": "Code Release for the DECODE submission (ISMB2022)", - "topics": [] - }, - { - "uid": "github/thetisproject/thetis", - "url": "https://github.com/thetisproject/thetis", - "rel": "/software/repository/github/thetisproject/thetis", - "avatar": "https://avatars.githubusercontent.com/u/17277005?v=4", - "description": "Finite element flow solver for simulating coastal and estuarine flows.", + "uid": "github/mortonne/psifr", + "url": "https://github.com/mortonne/psifr", + "rel": "/software/repository/github/mortonne/psifr", + "avatar": "https://avatars3.githubusercontent.com/u/9086777?v=4", + "description": "Psifr: Analysis and visualization of free recall data", "topics": [] }, { - "uid": "github/nvanalfen/halotools", - "url": "https://github.com/nvanalfen/halotools", - "rel": "/software/repository/github/nvanalfen/halotools", - "avatar": "https://avatars.githubusercontent.com/u/26467203?v=4", - "description": "Python package for studying large scale structure, cosmology, and galaxy evolution using N-body simulations and halo models", + "uid": "github/mwhosek/extlaw_H18", + "url": "https://github.com/mwhosek/extlaw_H18", + "rel": "/software/repository/github/mwhosek/extlaw_H18", + "avatar": "https://avatars.githubusercontent.com/u/5395634?v=4", + "description": "Stand-alone python code to generate extinction law between 0.8 -- 2.2 microns, from Hosek+18", "topics": [] }, { - "uid": "github/YaoGroup/DIFFICE_jax", - "url": "https://github.com/YaoGroup/DIFFICE_jax", - "rel": "/software/repository/github/YaoGroup/DIFFICE_jax", - "avatar": "https://avatars.githubusercontent.com/u/85553836?v=4", - "description": "Differentiable neural-network solver for data assimilation of ice shelves written in JAX", + "uid": "github/SNOwGLoBES/snowglobes", + "url": "https://github.com/SNOwGLoBES/snowglobes", + "rel": "/software/repository/github/SNOwGLoBES/snowglobes", + "avatar": "https://avatars.githubusercontent.com/u/24531429?v=4", + "description": "SNOwGLoBES code: SuperNova Observatories with GLoBES", "topics": [] }, { - "uid": "github/adamgayoso/totalVI_reproducibility", - "url": "https://github.com/adamgayoso/totalVI_reproducibility", - "rel": "/software/repository/github/adamgayoso/totalVI_reproducibility", - "avatar": "https://avatars.githubusercontent.com/u/10859440?v=4", - "description": null, + "uid": "github/UBC-Astrophysics/kd-match", + "url": "https://github.com/UBC-Astrophysics/kd-match", + "rel": "/software/repository/github/UBC-Astrophysics/kd-match", + "avatar": "https://avatars.githubusercontent.com/u/12797825?v=4", + "description": "Rapidly matches stellar catalogues", "topics": [] }, { - "uid": "github/locasto/libdisorder", - "url": "https://github.com/locasto/libdisorder", - "rel": "/software/repository/github/locasto/libdisorder", - "avatar": "https://avatars.githubusercontent.com/u/334168?v=4", - "description": "A simple C library for entropy measurement of byte streams and other data.", + "uid": "github/pierrepeterlongo/back_to_sequences", + "url": "https://github.com/pierrepeterlongo/back_to_sequences", + "rel": "/software/repository/github/pierrepeterlongo/back_to_sequences", + "avatar": "https://avatars.githubusercontent.com/u/8103041?v=4", + "description": null, "topics": [] }, { - "uid": "github/adithirgis/pollucheck", - "url": "https://github.com/adithirgis/pollucheck", - "rel": "/software/repository/github/adithirgis/pollucheck", - "avatar": "https://avatars.githubusercontent.com/u/63432077?v=4", - "description": "This application helps exploring the open source air quality data.", + "uid": "github/loneknightpy/idba", + "url": "https://github.com/loneknightpy/idba", + "rel": "/software/repository/github/loneknightpy/idba", + "avatar": "https://avatars.githubusercontent.com/u/3597711?v=4", + "description": "iterative De Bruijn Graph short read assemblers", "topics": [] }, { - "uid": "github/jhayer/baargin", - "url": "https://github.com/jhayer/baargin", - "rel": "/software/repository/github/jhayer/baargin", - "avatar": "https://avatars.githubusercontent.com/u/8300623?v=4", - "description": "Bacterial Assembly and Antimicrobial Resistance Genes In NextFlow", + "uid": "github/TomWagg/cogsworth", + "url": "https://github.com/TomWagg/cogsworth", + "rel": "/software/repository/github/TomWagg/cogsworth", + "avatar": "https://avatars.githubusercontent.com/u/21990332?v=4", + "description": "A Python package for performing self-consistent population synthesis and galactic dynamics simulations", "topics": [ - "antimicrobial-resistance", - "bacteria", - "genomics", - "wgs", - "nextflow-pipeline", - "workflow" + "astrophysics", + "galactic-dynamics", + "population-synthesis", + "python" ] }, { - "uid": "github/cullanhowlett/l-picola", - "url": "https://github.com/CullanHowlett/l-picola", - "rel": "/software/repository/github/cullanhowlett/l-picola", - "avatar": "https://avatars.githubusercontent.com/u/5528370?v=4", - "description": "A public repository for the code L-PICOLA", - "topics": [] + "uid": "github/sndik16/GAMA_quasarhosts_starformation", + "url": "https://github.com/sndik16/GAMA_quasarhosts_starformation", + "rel": "/software/repository/github/sndik16/GAMA_quasarhosts_starformation", + "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", + "description": "Code used in Stone et al. (in review, ApJ) for GAMA quasar host star formation history paper analysis.", + "topics": [ + "astronomy", + "galaxies", + "quasars", + "research", + "survey" + ] }, { - "uid": "github/bids-apps/giga_connectome", - "url": "https://github.com/bids-apps/giga_connectome", - "rel": "/software/repository/github/bids-apps/giga_connectome", - "avatar": "https://avatars.githubusercontent.com/u/20709205?v=4", - "description": "generate connectome from fMRIPrep outputs", + "uid": "github/sndik16/SFR_ChebyFit_example", + "url": "https://github.com/sndik16/SFR_ChebyFit_example", + "rel": "/software/repository/github/sndik16/SFR_ChebyFit_example", + "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", + "description": "A minimal example notebook with code demonstrating Chebyshev polynomial fitting to correct SFR values from one estimator to the baseline for another estimator", "topics": [] }, { - "uid": "github/Trovemaster/Duo", - "url": "https://github.com/Trovemaster/Duo", - "rel": "/software/repository/github/Trovemaster/Duo", - "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", - "description": "Duo is a diatomic code for solving a fully coupled rovibronic Schroedinger equation", + "uid": "github/sndik16/light-GG", + "url": "https://github.com/sndik16/light-GG", + "rel": "/software/repository/github/sndik16/light-GG", + "avatar": "https://avatars.githubusercontent.com/u/9065795?v=4", + "description": "2D Grid model which is light on memory usage", "topics": [] }, { - "uid": "github/Trovemaster/exocross", - "url": "https://github.com/Trovemaster/exocross", - "rel": "/software/repository/github/Trovemaster/exocross", - "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", - "description": "Fortran 2003 code to generate molecular spectra, partition functions, lifetimes, cooling functions etc using ExoMol line lists", + "uid": "github/OttoStruve/muler", + "url": "https://github.com/OttoStruve/muler", + "rel": "/software/repository/github/OttoStruve/muler", + "avatar": "https://avatars.githubusercontent.com/u/6210657?v=4", + "description": "A Python package for working with pipeline-produced spectra from IGRINS, HPF, and Keck NIRSPEC", "topics": [ - "physics", + "astronomy", "spectroscopy", - "molecules" + "exoplanets", + "stars", + "stellar-atmospheres", + "data-analysis", + "astronomical-algorithms", + "infrared", + "echelle", + "python", + "data-science" ] }, { - "uid": "github/Trovemaster/TROVE", - "url": "https://github.com/Trovemaster/TROVE", - "rel": "/software/repository/github/Trovemaster/TROVE", - "avatar": "https://avatars.githubusercontent.com/u/12001159?v=4", - "description": "Theoretical ROVibrational Energies: A variational program for accurate nuclear motion calculations", + "uid": "github/saphir746/BiobankRead-Bash", + "url": "https://github.com/saphir746/BiobankRead-Bash", + "rel": "/software/repository/github/saphir746/BiobankRead-Bash", + "avatar": "https://avatars.githubusercontent.com/u/11505614?v=4", + "description": "Python scripts to extract and pre-process UKB data", "topics": [] }, { - "uid": "github/rorybarnes/EqTide", - "url": "https://github.com/RoryBarnes/EqTide", - "rel": "/software/repository/github/rorybarnes/EqTide", - "avatar": "https://avatars.githubusercontent.com/u/4413842?v=4", - "description": "Source code for Equilibrium Tide calculations", + "uid": "github/vcflib/bio-vcf", + "url": "https://github.com/vcflib/bio-vcf", + "rel": "/software/repository/github/vcflib/bio-vcf", + "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", + "description": "Smart VCF parser DSL", + "topics": [] + }, + { + "uid": "github/vcflib/vcflib", + "url": "https://github.com/vcflib/vcflib", + "rel": "/software/repository/github/vcflib/vcflib", + "avatar": "https://avatars.githubusercontent.com/u/16582802?v=4", + "description": " C++ library and cmdline tools for parsing and manipulating VCF files", "topics": [ - "tides", - "orbits", - "planets", - "moons", - "exoplanets" + "variant-calling", + "genomics", + "vcf-manipulation", + "genotyping", + "haplotypecaller" ] }, { - "uid": "github/trygvrad/DF-XRM_viz", - "url": "https://github.com/trygvrad/DF-XRM_viz", - "rel": "/software/repository/github/trygvrad/DF-XRM_viz", - "avatar": "https://avatars.githubusercontent.com/u/2361452?v=4", - "description": "Visualization of DF-XRM", + "uid": "github/danielhuson/malt", + "url": "https://github.com/husonlab/malt", + "rel": "/software/repository/github/danielhuson/malt", + "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", + "description": "MEGAN alignment tool", "topics": [] }, { - "uid": "github/CastillonMiguel/phasefieldx", - "url": "https://github.com/CastillonMiguel/phasefieldx", - "rel": "/software/repository/github/CastillonMiguel/phasefieldx", - "avatar": "https://avatars.githubusercontent.com/u/103516477?v=4", - "description": "An Open-Source Framework for Advanced Phase-Field Simulations", - "topics": [ - "fatigue", - "fem", - "finite-elements", - "fracture", - "fracture-mechanics", - "phase-field", - "phase-field-fracture", - "solidification" - ] + "uid": "github/danielhuson/dendroscope3", + "url": "https://github.com/husonlab/dendroscope3", + "rel": "/software/repository/github/danielhuson/dendroscope3", + "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", + "description": "Dendroscope program for analyzing and visualizing rooted phylogenetic trees and networks", + "topics": [] }, { - "uid": "github/VarStarDetect/varstardetect", - "url": "https://github.com/VarStarDetect/varstardetect", - "rel": "/software/repository/github/VarStarDetect/varstardetect", - "avatar": "https://avatars.githubusercontent.com/u/89477120?v=4", - "description": null, + "uid": "github/danielhuson/jloda", + "url": "https://github.com/husonlab/jloda", + "rel": "/software/repository/github/danielhuson/jloda", + "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", + "description": "JLODA - Java library of data structures and algorithms", "topics": [] }, { - "uid": "github/jdeast/EXOFASTv2", - "url": "https://github.com/jdeast/EXOFASTv2", - "rel": "/software/repository/github/jdeast/EXOFASTv2", - "avatar": "https://avatars.githubusercontent.com/u/10566919?v=4", - "description": "An exoplanet transit, radial velocity, astrometry, and stellar fitting software package in IDL", + "uid": "github/danielhuson/megan-ce", + "url": "https://github.com/husonlab/megan-ce", + "rel": "/software/repository/github/danielhuson/megan-ce", + "avatar": "https://avatars.githubusercontent.com/u/6740594?v=4", + "description": "MEGAN Community Edition", "topics": [] }, { - "uid": "github/TrackerControl/tracker-control-android", - "url": "https://github.com/TrackerControl/tracker-control-android", - "rel": "/software/repository/github/TrackerControl/tracker-control-android", - "avatar": "https://avatars.githubusercontent.com/u/81009368?v=4", - "description": "TrackerControl: monitor and control trackers and ads.", + "uid": "github/jbuisine/macop", + "url": "https://github.com/jbuisine/macop", + "rel": "/software/repository/github/jbuisine/macop", + "avatar": "https://avatars.githubusercontent.com/u/11876986?v=4", + "description": "Minimalist And Customisable Optimisation python Package", "topics": [ - "android", - "tracking-protection", - "privacy" + "algorithms", + "python", + "generic", + "optimisation", + "evolutionary-algorithms" ] }, { - "uid": "github/linbox-team/linbox", - "url": "https://github.com/linbox-team/linbox", - "rel": "/software/repository/github/linbox-team/linbox", - "avatar": "https://avatars1.githubusercontent.com/u/13101892?v=4", - "description": "LinBox - C++ library for exact, high-performance linear algebra ", - "topics": [ - "linear-algebra", - "finite-fields", - "multiprecision", - "blackbox", - "linear-system-solver" - ] + "uid": "github/mib-unitn/SoFT", + "url": "https://github.com/mib-unitn/SoFT", + "rel": "/software/repository/github/mib-unitn/SoFT", + "avatar": "https://avatars.githubusercontent.com/u/150249871?v=4", + "description": "Feature tracking suite for the solar atmosphere", + "topics": [] }, { - "uid": "github/carlosandrepaes/GaPP", - "url": "https://github.com/carlosandrepaes/GaPP", - "rel": "/software/repository/github/carlosandrepaes/GaPP", - "avatar": "https://avatars.githubusercontent.com/u/9978975?v=4", - "description": "Gaussian Processes GaPP code auxiliary repository ", + "uid": "github/clemson-cal/sailfish", + "url": "https://github.com/clemson-cal/sailfish", + "rel": "/software/repository/github/clemson-cal/sailfish", + "avatar": "https://avatars.githubusercontent.com/u/70648863?v=4", + "description": "GPU-accelerated astrophysics gas dynamics code", "topics": [] }, { - "uid": "github/krab1k/ChargeFW2", - "url": "https://github.com/krab1k/ChargeFW2", - "rel": "/software/repository/github/krab1k/ChargeFW2", - "avatar": "https://avatars.githubusercontent.com/u/16164737?v=4", - "description": "The core part of Atomic Charge Calculator II.", + "uid": "github/moead-framework/framework", + "url": "https://github.com/moead-framework/framework", + "rel": "/software/repository/github/moead-framework/framework", + "avatar": "https://avatars.githubusercontent.com/u/57288529?v=4", + "description": "MOEA/D is a general-purpose algorithm framework. It decomposes a multi-objective optimization problem into a number of single-objective optimization sub-problems and then uses a search heuristic to optimize these sub-problems simultaneously and cooperatively.", "topics": [ - "charges" + "moead", + "framework", + "multi-objective-optimization", + "multi-objective", + "operations-research", + "pypi", + "modular-framework", + "moea", + "python" ] }, { - "uid": "github/mayuresh159/starsense_algorithms", - "url": "https://github.com/mayuresh159/starsense_algorithms", - "rel": "/software/repository/github/mayuresh159/starsense_algorithms", - "avatar": "https://avatars.githubusercontent.com/u/5468582?v=4", - "description": "This is a software package for testing and performance evaluation of different star sensors. The algorithms used for calculating quaternions from star field images are : centroiding, geometric voting and QUEST algorithms. The physical parameters of a star sensor are parametrized and by changing these parameters various performance estimators like sky coverage, memory requirement, timing requirements etc can be estimated for the selected star sensor. ", - "topics": [] - }, - { - "uid": "github/erhard-lab/gedi", - "url": "https://github.com/erhard-lab/gedi", - "rel": "/software/repository/github/erhard-lab/gedi", - "avatar": "https://avatars.githubusercontent.com/u/24650596?v=4", - "description": "Gedi is a software platform for working with genomic data such as sequencing reads, sequences, per-base numeric values or annotations written in Java.", + "uid": "github/IMB-Computational-Genomics-Lab/scGPS", + "url": "https://github.com/IMB-Computational-Genomics-Lab/scGPS", + "rel": "/software/repository/github/IMB-Computational-Genomics-Lab/scGPS", + "avatar": "https://avatars.githubusercontent.com/u/16315638?v=4", + "description": "A framework for clustering (CORE) and estimation of relationship between pairs of clusters (scGPS) from single cell data ", "topics": [] }, { - "uid": "github/DedalusProject/eigentools", - "url": "https://github.com/DedalusProject/eigentools", - "rel": "/software/repository/github/DedalusProject/eigentools", - "avatar": "https://avatars.githubusercontent.com/u/25985571?v=4", - "description": "The Eigentools package for Dedalus", + "uid": "github/gotsunami/Youpi", + "url": "https://github.com/gotsunami/Youpi", + "rel": "/software/repository/github/gotsunami/Youpi", + "avatar": "https://avatars.githubusercontent.com/u/7566806?v=4", + "description": "A web application providing high level functionalities to perform data reduction on scientific FITS images.", "topics": [] }, { - "uid": "github/swagnercarena/ovejero", - "url": "https://github.com/swagnercarena/ovejero", - "rel": "/software/repository/github/swagnercarena/ovejero", - "avatar": "https://avatars.githubusercontent.com/u/8857025?v=4", - "description": "Conducts hierarchical inference of strongly-lensed systems with Bayesian neural networks", + "uid": "github/MorgansLab/OSCILOS_Long", + "url": "https://github.com/MorgansLab/OSCILOS_long", + "rel": "/software/repository/github/MorgansLab/OSCILOS_Long", + "avatar": "https://avatars.githubusercontent.com/u/9108767?v=4", + "description": "OSCILOS_long is an open source code for simulating combustion instabilities. OSCILOS_lite was developed at Imperial College London by Prof. Aimee S. Morgans and co-workers. The code is open source and written in MATLAB.", "topics": [] }, { - "uid": "github/swagnercarena/paltas", - "url": "https://github.com/swagnercarena/paltas", - "rel": "/software/repository/github/swagnercarena/paltas", - "avatar": "https://avatars.githubusercontent.com/u/8857025?v=4", - "description": "Conduct simulation-based inference on strong gravitational lensing systems.", + "uid": "github/ruizengalways/FOD-Net", + "url": "https://github.com/ruizengalways/FOD-Net", + "rel": "/software/repository/github/ruizengalways/FOD-Net", + "avatar": "https://avatars.githubusercontent.com/u/9302805?v=4", + "description": "FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution", "topics": [ - "simulation-based-inference", - "neural-network", - "astrophysics", - "cosmology", - "hierarchical-model" + "deep-learning", + "diffusion-mri", + "medical-imaging", + "connectomics", + "tractography", + "mrtrix3", + "fod" ] }, { - "uid": "github/bio-tools/biotoolsSum", - "url": "https://github.com/bio-tools/biotoolsSum", - "rel": "/software/repository/github/bio-tools/biotoolsSum", - "avatar": "https://avatars3.githubusercontent.com/u/15219975?v=4", - "description": "bio.tools interface with report generation features", + "uid": "github/astroumd/miriad", + "url": "https://github.com/astroumd/miriad", + "rel": "/software/repository/github/astroumd/miriad", + "avatar": "https://avatars.githubusercontent.com/u/22331871?v=4", + "description": "Classic CARMA version of MIRIAD", "topics": [] }, { - "uid": "github/pydemull/activAnalyzer", - "url": "https://github.com/pydemull/activAnalyzer", - "rel": "/software/repository/github/pydemull/activAnalyzer", - "avatar": "https://avatars.githubusercontent.com/u/63407978?v=4", - "description": null, + "uid": "github/antoinediez/Sisyphe", + "url": "https://github.com/antoinediez/Sisyphe", + "rel": "/software/repository/github/antoinediez/Sisyphe", + "avatar": "https://avatars.githubusercontent.com/u/70896255?v=4", + "description": "Simulation of Systems of interacting mean-field Particles with High Efficiency", "topics": [ - "app", - "shiny", - "actigraph", - "monitor", - "accelerometer", - "r" + "particles", + "gpu", + "mean-field", + "self-organization", + "swarming", + "agent-based-simulation", + "agent-based-model" ] }, { - "uid": "github/MLMI2-CSSI/foundry", - "url": "https://github.com/MLMI2-CSSI/foundry", - "rel": "/software/repository/github/MLMI2-CSSI/foundry", - "avatar": "https://avatars.githubusercontent.com/u/60273950?v=4", - "description": "Simplifying the discovery and usage of machine-learning ready datasets in materials science and chemistry", - "topics": [ - "data-science", - "machine-learning", - "materials-science", - "datasets", - "chemistry" - ] + "uid": "github/CIbiv/guaCAMOLE", + "url": "https://github.com/Cibiv/GuaCAMOLE", + "rel": "/software/repository/github/CIbiv/guaCAMOLE", + "avatar": "https://avatars.githubusercontent.com/u/2115077?v=4", + "description": "GuaCAMOLE (Guanosine Cytosine Aware Metagenomic Opulence Least squares Estimation) algorithm for the efficient detection and removal of GC bias from metagenomic samples", + "topics": [] }, { - "uid": "github/qiime2/q2-vsearch", - "url": "https://github.com/qiime2/q2-vsearch", - "rel": "/software/repository/github/qiime2/q2-vsearch", - "avatar": "https://avatars.githubusercontent.com/u/18176583?v=4", - "description": "vsearch plugin for QIIME 2", - "topics": [ - "hacktoberfest" - ] + "uid": "github/jcolinhill/pyilc", + "url": "https://github.com/jcolinhill/pyilc", + "rel": "/software/repository/github/jcolinhill/pyilc", + "avatar": "https://avatars.githubusercontent.com/u/16061599?v=4", + "description": "Needlet ILC in Python", + "topics": [] }, { - "uid": "github/exoclim/aeolus", - "url": "https://github.com/exoclim/aeolus", - "rel": "/software/repository/github/exoclim/aeolus", - "avatar": "https://avatars.githubusercontent.com/u/43474110?v=4", - "description": "Analysis and visualisation of atmospheric model output powered by iris.", - "topics": [ - "python-library", - "atmospheric-science", - "planetary-science", - "exoplanets", - "atmospheric-modelling", - "climate-model" - ] + "uid": "github/geckos-survey/ngist", + "url": "https://github.com/geckos-survey/ngist", + "rel": "/software/repository/github/geckos-survey/ngist", + "avatar": "https://avatars.githubusercontent.com/u/114988409?v=4", + "description": null, + "topics": [] }, { - "uid": "github/julia-wrobel/registr", - "url": "https://github.com/julia-wrobel/registr", - "rel": "/software/repository/github/julia-wrobel/registr", - "avatar": "https://avatars.githubusercontent.com/u/11615315?v=4", - "description": "Register exponential family curves", - "topics": [] + "uid": "github/aris-mav/NMRInversions.jl", + "url": "https://github.com/aris-mav/NMRInversions.jl", + "rel": "/software/repository/github/aris-mav/NMRInversions.jl", + "avatar": "https://avatars.githubusercontent.com/u/116081909?v=4", + "description": "Numerical inversions for Nuclear Magnetic Resonance relaxation and diffusion experiments. Click on the link below for the full documentation.", + "topics": [ + "inverse-problems", + "nmr", + "nmr-relaxation", + "nmr-diffusion" + ] }, { - "uid": "github/astroferreira/galclean", - "url": "https://github.com/astroferreira/galclean", - "rel": "/software/repository/github/astroferreira/galclean", - "avatar": "https://avatars.githubusercontent.com/u/14275979?v=4", - "description": "Simple tool to remove bright sources (excluding the galaxy itself) from a fits image using Astropy's PhotUtils", + "uid": "github/ebachelet/pyLIMA", + "url": "https://github.com/ebachelet/pyLIMA", + "rel": "/software/repository/github/ebachelet/pyLIMA", + "avatar": "https://avatars.githubusercontent.com/u/14871821?v=4", + "description": null, "topics": [] }, { - "uid": "github/haotianteng/BoostNano", - "url": "https://github.com/haotianteng/BoostNano", - "rel": "/software/repository/github/haotianteng/BoostNano", - "avatar": "https://avatars.githubusercontent.com/u/11155295?v=4", - "description": "A segmentation toolkit for segment the Nanopore RNA signal.", + "uid": "github/lehtiolab/msstitch", + "url": "https://github.com/lehtiolab/msstitch", + "rel": "/software/repository/github/lehtiolab/msstitch", + "avatar": "https://avatars.githubusercontent.com/u/32761652?v=4", + "description": "MS proteomics post-processing utilities", "topics": [] }, { - "uid": "github/flekschas/jupyter-scatter", - "url": "https://github.com/flekschas/jupyter-scatter", - "rel": "/software/repository/github/flekschas/jupyter-scatter", - "avatar": "https://avatars.githubusercontent.com/u/932103?v=4", - "description": "Interactive 2D scatter plot widget for Jupyter Lab and Notebook. Scales to millions of points!", + "uid": "github/sebastien-plutniak/archeofrag", + "url": "https://github.com/sebastien-plutniak/archeofrag", + "rel": "/software/repository/github/sebastien-plutniak/archeofrag", + "avatar": "https://avatars.githubusercontent.com/u/53480606?v=4", + "description": "R package for Refitting and Spatial Analysis in Archaeology", "topics": [ - "scatter-plot", - "visualization", - "jupyterlab-extension", - "jupyter-notebook-extension" + "archaeology", + "archaeological-science", + "archaeological-objects", + "network-analysis", + "fragmentation" ] }, { - "uid": "github/flekschas/regl-scatterplot", - "url": "https://github.com/flekschas/regl-scatterplot", - "rel": "/software/repository/github/flekschas/regl-scatterplot", - "avatar": "https://avatars.githubusercontent.com/u/932103?v=4", - "description": "Scalable WebGL-based scatter plot library build with Regl", + "uid": "github/sebastien-plutniak/archeoviz", + "url": "https://github.com/sebastien-plutniak/archeoviz", + "rel": "/software/repository/github/sebastien-plutniak/archeoviz", + "avatar": "https://avatars.githubusercontent.com/u/53480606?v=4", + "description": "Visualisation, Exploration, and Web Communication of Archaeological Spatial Data", "topics": [ - "scatterplot", - "visualization", - "2d", - "webgl", - "regl", - "scatter-plot" - ] - }, - { - "uid": "github/Sarc-Graph/sarcgraph", - "url": "https://github.com/Sarc-Graph/sarcgraph", - "rel": "/software/repository/github/Sarc-Graph/sarcgraph", - "avatar": "https://avatars.githubusercontent.com/u/111386973?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/mmelwani/AccretR", - "url": "https://github.com/mmelwani/AccretR", - "rel": "/software/repository/github/mmelwani/AccretR", - "avatar": "https://avatars.githubusercontent.com/u/38257523?v=4", - "description": "A planet accretion program that calculates mass, radius and composition along a growth track", - "topics": [] + "archaeology", + "archeology", + "data-visualization", + "r", + "r-package", + "rstats" + ] }, { - "uid": "github/LabTranslationalArchitectomics/riboWaltz", - "url": "https://github.com/LabTranslationalArchitectomics/riboWaltz", - "rel": "/software/repository/github/LabTranslationalArchitectomics/riboWaltz", - "avatar": "https://avatars.githubusercontent.com/u/21190963?v=4", - "description": "optimization of ribosome P-site positioning in ribosome profiling data", + "uid": "github/relipmoc/skewer", + "url": "https://github.com/relipmoc/skewer", + "rel": "/software/repository/github/relipmoc/skewer", + "avatar": "https://avatars.githubusercontent.com/u/7967213?v=4", + "description": "implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming. It is specially designed for processing next-generation sequencing (NGS) paired-end sequences.", "topics": [] }, { - "uid": "github/almost6heads/ConleyDynamics.jl", - "url": "https://github.com/almost6heads/ConleyDynamics.jl", - "rel": "/software/repository/github/almost6heads/ConleyDynamics.jl", - "avatar": "https://avatars.githubusercontent.com/u/19210090?v=4", - "description": "Conley index and multivector fields for Julia", + "uid": "github/felipeelorrieta/IAR_Model", + "url": "https://github.com/felipeelorrieta/IAR_Model", + "rel": "/software/repository/github/felipeelorrieta/IAR_Model", + "avatar": "https://avatars.githubusercontent.com/u/41742849?v=4", + "description": "This folder contains R and Python functions to fit unequally spaced time series from the Irregular Autoregressive (IAR). From the functions of this folder we can generate observations for each process, compute the negative of the log likelihood of these process, fit each model to irregularly sampled data, and test the significance of the estimated parameters.", "topics": [] }, { - "uid": "github/JacksonBurns/astartes", - "url": "https://github.com/JacksonBurns/astartes", - "rel": "/software/repository/github/JacksonBurns/astartes", - "avatar": "https://avatars.githubusercontent.com/u/33505528?v=4", - "description": "Better Data Splits for Machine Learning", + "uid": "github/qcxms/QCxMS", + "url": "https://github.com/qcxms/QCxMS", + "rel": "/software/repository/github/qcxms/QCxMS", + "avatar": "https://avatars.githubusercontent.com/u/64989407?v=4", + "description": "Quantum mechanic mass spectrometry calculation program", "topics": [ - "ai", - "ml", - "data-science", - "machine-learning", - "sampling", - "python" + "mass-spectrometry", + "computational-chemistry", + "molecular-dynamics", + "computational-mass-spectrometry" ] }, { - "uid": "github/LandSciTech/ccviR", - "url": "https://github.com/LandSciTech/ccviR", - "rel": "/software/repository/github/LandSciTech/ccviR", - "avatar": "https://avatars.githubusercontent.com/u/41919529?v=4", - "description": "Implement NatureServe climate change vulnerability index in R", + "uid": "github/xiaziyna/PyStarshade", + "url": "https://github.com/xiaziyna/PyStarshade", + "rel": "/software/repository/github/xiaziyna/PyStarshade", + "avatar": "https://avatars.githubusercontent.com/u/79553716?v=4", + "description": "PyStarshade is a Python library for efficient Fresnel optical simulations of direct imaging with an external occulter from stellar system to CCD", "topics": [] }, { - "uid": "github/blind-contours/CVtreeMLE", - "url": "https://github.com/blind-contours/CVtreeMLE", - "rel": "/software/repository/github/blind-contours/CVtreeMLE", - "avatar": "https://avatars.githubusercontent.com/u/54640903?v=4", - "description": ":deciduous_tree: :dart: Cross Validated Decision Trees with Targeted Maximum Likelihood Estimation", + "uid": "github/Bios4Biol/intronSeeker", + "url": "https://github.com/Bios4Biol/intronSeeker", + "rel": "/software/repository/github/Bios4Biol/intronSeeker", + "avatar": "https://avatars.githubusercontent.com/u/38938508?v=4", + "description": "IntronSeeker identifies potentially retained introns in de novo RNA-seq assembly in order to quantify and remove them.", + "topics": [] + }, + { + "uid": "github/AngryMaciek/hypercomplex", + "url": "https://github.com/AngryMaciek/hypercomplex", + "rel": "/software/repository/github/AngryMaciek/hypercomplex", + "avatar": "https://avatars.githubusercontent.com/u/19755308?v=4", + "description": "Abstract & fast header-only C++ template library for lattice-based cryptosystems in high-dimensional algebras", "topics": [ - "machine-learning", - "targeted-learning", - "statistics", - "variable-importance", - "causal-inference", - "decision-trees", - "robust-statistics", - "causal-effects", - "exposure-mixtures" + "algebra", + "mathematics", + "precision", + "cryptography", + "post-quantum-cryptography" ] }, { - "uid": "github/blind-contours/SuperNOVA", - "url": "https://github.com/blind-contours/SuperNOVA", - "rel": "/software/repository/github/blind-contours/SuperNOVA", - "avatar": "https://avatars.githubusercontent.com/u/54640903?v=4", - "description": ":dizzy: :dart: Automatic identification of variable and interaction importance using basis functions and non-parametric estimation of interactions/effect modification using joint stochastic interventions.", + "uid": "github/m-dadej/MarSwitching.jl", + "url": "https://github.com/m-dadej/MarSwitching.jl", + "rel": "/software/repository/github/m-dadej/MarSwitching.jl", + "avatar": "https://avatars.githubusercontent.com/u/48299815?v=4", + "description": "MarSwitching.jl: Julia package for Markov switching dynamic models", "topics": [ + "econometrics", + "julia", "machine-learning", - "variable-importance", - "interactions", - "targeted-learning", + "markov-chain", "statistics", - "mixed-exposure" + "time-series", + "data-science" ] }, { - "uid": "github/abrupt-climate/hyper-canny", - "url": "https://github.com/abrupt-climate/hyper-canny", - "rel": "/software/repository/github/abrupt-climate/hyper-canny", - "avatar": "https://avatars1.githubusercontent.com/u/26436945?v=4", - "description": "High dimensional Canny edge detection", - "topics": [] + "uid": "github/MrOlm/drep", + "url": "https://github.com/MrOlm/drep", + "rel": "/software/repository/github/MrOlm/drep", + "avatar": "https://avatars.githubusercontent.com/u/13424205?v=4", + "description": "a python program for rapidly comparing large numbers of genomes, dRep can also \"de-replicate\" a genome set by identifying groups of highly similar genomes and choosing the best representative genome for each genome set.", + "topics": [ + "bioinformatics", + "metagenomics", + "microbiology", + "assembly", + "microbial-genomes" + ] }, { - "uid": "github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", - "url": "https://github.com/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", - "rel": "/software/repository/github/AbbasAlameer/geoCancerPrognosticDatasetsRetriever", - "avatar": "https://avatars.githubusercontent.com/u/85877376?v=4", - "description": "GEO Cancer Prognostic Datasets Retriever is a bioinformatics tool for cancer prognostic dataset retrieval from the GEO website.", + "uid": "github/bodulic/CATS-rb", + "url": "https://github.com/bodulic/CATS-rb", + "rel": "/software/repository/github/bodulic/CATS-rb", + "avatar": "https://avatars.githubusercontent.com/u/43442824?v=4", + "description": null, "topics": [] }, { - "uid": "github/matplotlib/matplotlib", - "url": "https://github.com/matplotlib/matplotlib", - "rel": "/software/repository/github/matplotlib/matplotlib", - "avatar": "https://avatars0.githubusercontent.com/u/215947?v=4", - "description": "matplotlib: plotting with Python", + "uid": "github/bodulic/CATS-rf", + "url": "https://github.com/bodulic/CATS-rf", + "rel": "/software/repository/github/bodulic/CATS-rf", + "avatar": "https://avatars.githubusercontent.com/u/43442824?v=4", + "description": null, "topics": [] }, { - "uid": "github/Someone789/galax2d", - "url": "https://github.com/Someone789/galax2d", - "rel": "/software/repository/github/Someone789/galax2d", - "avatar": "https://avatars.githubusercontent.com/u/11181246?v=4", - "description": "matlab or octave code to compute the 2D stationary solution of the isothermal Euler equations of gas dynamics in a rotating galaxy with a weak bar", + "uid": "github/weiliu123/PCLassoReg", + "url": "https://github.com/weiliu123/PCLassoReg", + "rel": "/software/repository/github/weiliu123/PCLassoReg", + "avatar": "https://avatars.githubusercontent.com/u/20275072?v=4", + "description": null, "topics": [] }, { - "uid": "github/florian-lienhard/MM-LSD", - "url": "https://github.com/florian-lienhard/MM-LSD", - "rel": "/software/repository/github/florian-lienhard/MM-LSD", - "avatar": "https://avatars.githubusercontent.com/u/72667280?v=4", - "description": null, + "uid": "github/OpenMD/OpenMD", + "url": "https://github.com/OpenMD/OpenMD", + "rel": "/software/repository/github/OpenMD/OpenMD", + "avatar": "https://avatars.githubusercontent.com/u/6164615?v=4", + "description": "Molecular Dynamics in the Open", "topics": [] }, { - "uid": "github/Professor-G/MicroLIA", - "url": "https://github.com/Professor-G/MicroLIA", - "rel": "/software/repository/github/Professor-G/MicroLIA", - "avatar": "https://avatars.githubusercontent.com/u/19847448?v=4", - "description": "Gravitational microlensing classification engine using machine learning.", + "uid": "github/Nicholaswogan/PhotochemPy", + "url": "https://github.com/Nicholaswogan/PhotochemPy", + "rel": "/software/repository/github/Nicholaswogan/PhotochemPy", + "avatar": "https://avatars.githubusercontent.com/u/18489667?v=4", + "description": "Photochemical model of rocky planet's atmospheres.", "topics": [ - "microlensing", - "detection", - "algorithm", - "random-forest", - "machine-learning" + "fortran-source", + "photochemical-model", + "atmosphere", + "python" ] }, { - "uid": "github/LBC-LNBio/PyMOL-KVFinder-web-Tools", - "url": "https://github.com/LBC-LNBio/PyMOL-KVFinder-web-Tools", - "rel": "/software/repository/github/LBC-LNBio/PyMOL-KVFinder-web-Tools", - "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", - "description": "PyMOL KVFinder-web Tools: a PyMOL v2 plugin for interacting with KVFinder-web service", + "uid": "github/Nicholaswogan/photochem", + "url": "https://github.com/Nicholaswogan/photochem", + "rel": "/software/repository/github/Nicholaswogan/photochem", + "avatar": "https://avatars.githubusercontent.com/u/18489667?v=4", + "description": "A chemical model of planetary atmospheres", "topics": [ - "cavity-detection", - "cavity-characterization", - "webservice-client", - "pymol-plugin" + "photochemistry", + "photochemical-model", + "earth-science", + "atmosphere", + "cython", + "fortran", + "python", + "exoplanets", + "astrobiology" ] }, { - "uid": "github/LBC-LNBio/pyKVFinder", - "url": "https://github.com/LBC-LNBio/pyKVFinder", - "rel": "/software/repository/github/LBC-LNBio/pyKVFinder", - "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", - "description": "pyKVFinder: Python-C parallel KVFinder", - "topics": [ - "cavity-detection", - "cavity-characterization", - "python-package", - "numpy-arrays", - "scripting" - ] + "uid": "github/onnela-lab/beiwe-backend", + "url": "https://github.com/onnela-lab/beiwe-backend", + "rel": "/software/repository/github/onnela-lab/beiwe-backend", + "avatar": "https://avatars.githubusercontent.com/u/12967946?v=4", + "description": "Beiwe is a smartphone-based digital phenotyping research platform. This is the Beiwe backend code", + "topics": [] }, { - "uid": "github/LBC-LNBio/parKVFinder-win", - "url": "https://github.com/LBC-LNBio/parKVFinder-win", - "rel": "/software/repository/github/LBC-LNBio/parKVFinder-win", - "avatar": "https://avatars.githubusercontent.com/u/9485087?v=4", - "description": "parKVFinder-win: thread-level parallel KVFinder for Windows ", + "uid": "github/ICRAR/libprofit", + "url": "https://github.com/ICRAR/libprofit", + "rel": "/software/repository/github/ICRAR/libprofit", + "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", + "description": "A C++ library that produces images based on different luminosity profiles", "topics": [ - "cavity-detection", - "cavity-characterization", - "pymol-plugin" + "astronomy", + "photometry", + "opencl", + "openmp", + "convolution" ] }, { - "uid": "github/nhejazi/medoutcon", - "url": "https://github.com/nhejazi/medoutcon", - "rel": "/software/repository/github/nhejazi/medoutcon", - "avatar": "https://avatars.githubusercontent.com/u/8527276?v=4", - "description": ":package: R/medoutcon: Efficient Causal Mediation Analysis with Natural and Interventional Direct/Indirect Effects", - "topics": [ - "causal-inference", - "mediation-analysis", - "stochastic-interventions", - "machine-learning", - "targeted-learning", - "inverse-probability-weights", - "treatment-effects", - "r-package", - "r", - "causal-machine-learning" - ] + "uid": "github/ICRAR/shark", + "url": "https://github.com/ICRAR/shark", + "rel": "/software/repository/github/ICRAR/shark", + "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", + "description": null, + "topics": [] }, { - "uid": "github/nhejazi/txshift", - "url": "https://github.com/nhejazi/txshift", - "rel": "/software/repository/github/nhejazi/txshift", - "avatar": "https://avatars0.githubusercontent.com/u/8527276?v=4", - "description": ":package: :game_die: R/txshift: Efficient Estimation of the Causal Effects of Stochastic Interventions, with Two-Phase Sampling Corrections", - "topics": [ - "causal-inference", - "targeted-learning", - "machine-learning", - "stochastic-interventions", - "treatment-effects", - "variable-importance", - "censored-data", - "causal-effects", - "statistics", - "robust-statistics", - "stochastic-treatment-regimes" - ] + "uid": "github/ICRAR/ProFit", + "url": "https://github.com/ICRAR/ProFit", + "rel": "/software/repository/github/ICRAR/ProFit", + "avatar": "https://avatars.githubusercontent.com/u/1192804?v=4", + "description": "ProFit is a galaxy image bulge-disk decomposition program", + "topics": [] }, { - "uid": "github/nhejazi/haldensify", - "url": "https://github.com/nhejazi/haldensify", - "rel": "/software/repository/github/nhejazi/haldensify", - "avatar": "https://avatars.githubusercontent.com/u/8527276?v=4", - "description": ":package: R/haldensify: Highly Adaptive Lasso Conditional Density Estimation", - "topics": [ - "machine-learning", - "density-estimation", - "nonparametric-regression", - "highly-adaptive-lasso", - "propensity-score", - "conditional-density-estimates", - "causal-inference", - "inverse-probability-weights" - ] + "uid": "github/cov-lineages/pangoLEARN", + "url": "https://github.com/cov-lineages/pangoLEARN", + "rel": "/software/repository/github/cov-lineages/pangoLEARN", + "avatar": "https://avatars.githubusercontent.com/u/63172559?v=4", + "description": "Store of the trained model for pangolin to access.", + "topics": [] }, { - "uid": "github/aneeshnaik/spam", - "url": "https://github.com/aneeshnaik/spam", - "rel": "/software/repository/github/aneeshnaik/spam", - "avatar": "https://avatars.githubusercontent.com/u/48957123?v=4", - "description": "spam is a Python 3 package, used to search for imprints of Hu-Sawicki f(R) gravity in the rotation curves of the SPARC sample.", + "uid": "github/cov-lineages/pangolin", + "url": "https://github.com/cov-lineages/pangolin", + "rel": "/software/repository/github/cov-lineages/pangolin", + "avatar": "https://avatars.githubusercontent.com/u/63172559?v=4", + "description": "Software package for assigning SARS-CoV-2 genome sequences to global lineages.", "topics": [] }, { - "uid": "github/aneeshnaik/lintsampler", - "url": "https://github.com/aneeshnaik/lintsampler", - "rel": "/software/repository/github/aneeshnaik/lintsampler", - "avatar": "https://avatars.githubusercontent.com/u/48957123?v=4", - "description": "Efficient random sampling via linear interpolation.", - "topics": [ - "numpy", - "python", - "random-generation", - "statistics", - "random-sampling", - "low-discrepancy-sequence" - ] + "uid": "github/shbhuk/barycorrpy", + "url": "https://github.com/shbhuk/barycorrpy", + "rel": "/software/repository/github/shbhuk/barycorrpy", + "avatar": "https://avatars.githubusercontent.com/u/25436514?v=4", + "description": "Python version of Barycorr", + "topics": [] }, { - "uid": "github/djsutherland/py-sdm", - "url": "https://github.com/djsutherland/py-sdm", - "rel": "/software/repository/github/djsutherland/py-sdm", - "avatar": "https://avatars.githubusercontent.com/u/36478?v=4", - "description": "Python implementation of nonparametric nearest-neighbor-based estimators for divergences between distributions.", + "uid": "github/shbhuk/mrexo", + "url": "https://github.com/shbhuk/mrexo", + "rel": "/software/repository/github/shbhuk/mrexo", + "avatar": "https://avatars.githubusercontent.com/u/25436514?v=4", + "description": "Non parametric Mass - Radius relationship for exoplanets", "topics": [] }, { - "uid": "github/astroumd/miriad", - "url": "https://github.com/astroumd/miriad", - "rel": "/software/repository/github/astroumd/miriad", - "avatar": "https://avatars.githubusercontent.com/u/22331871?v=4", - "description": "Classic CARMA version of MIRIAD", + "uid": "github/firedrakeproject/checkpoint_schedules", + "url": "https://github.com/firedrakeproject/checkpoint_schedules", + "rel": "/software/repository/github/firedrakeproject/checkpoint_schedules", + "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", + "description": "Schedules for incremental checkpointing of adjoint simulations.", "topics": [] }, { - "uid": "github/JFFleming/RCFV_Reader", - "url": "https://github.com/JFFleming/RCFV_Reader", - "rel": "/software/repository/github/JFFleming/RCFV_Reader", - "avatar": "https://avatars.githubusercontent.com/u/84772413?v=4", - "description": "RCFV reader is a new software to quickly calculate normalised relative compositional frequency variability.", + "uid": "github/firedrakeproject/gusto", + "url": "https://github.com/firedrakeproject/gusto", + "rel": "/software/repository/github/firedrakeproject/gusto", + "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", + "description": "Three dimensional atmospheric dynamical core using the Gung Ho numerics.", "topics": [] }, { - "uid": "github/brentp/gsort", - "url": "https://github.com/brentp/gsort", - "rel": "/software/repository/github/brentp/gsort", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "sort genomic data", + "uid": "github/firedrakeproject/firedrake", + "url": "https://github.com/firedrakeproject/firedrake", + "rel": "/software/repository/github/firedrakeproject/firedrake", + "avatar": "https://avatars.githubusercontent.com/u/5558005?v=4", + "description": "Firedrake is an automated system for the portable solution of partial differential equations using the finite element method (FEM)", "topics": [] }, { - "uid": "github/brentp/peddy", - "url": "https://github.com/brentp/peddy", - "rel": "/software/repository/github/brentp/peddy", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "genotype :: ped correspondence check, ancestry check, sex check. directly, quickly on VCF", - "topics": [ - "genomics", - "vcf", - "bioinformatics", - "pedigree", - "genotype", - "ancestry" - ] + "uid": "github/linnarsson-lab/loompy", + "url": "https://github.com/linnarsson-lab/loompy", + "rel": "/software/repository/github/linnarsson-lab/loompy", + "avatar": "https://avatars.githubusercontent.com/u/10656411?v=4", + "description": "Python implementation of the Loom file format - http://loompy.org", + "topics": [] }, { - "uid": "github/brentp/vcfanno", - "url": "https://github.com/brentp/vcfanno", - "rel": "/software/repository/github/brentp/vcfanno", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "annotate a VCF with other VCFs/BEDs/tabixed files ", - "topics": [ - "bioinformatics", - "vcf", - "annotation", - "genomics" - ] + "uid": "github/iopenshell/ezSpectrum", + "url": "https://github.com/iopenshell/ezSpectrum", + "rel": "/software/repository/github/iopenshell/ezSpectrum", + "avatar": "https://avatars.githubusercontent.com/u/10172280?v=4", + "description": null, + "topics": [] }, { - "uid": "github/brentp/geneimpacts", - "url": "https://github.com/brentp/geneimpacts", - "rel": "/software/repository/github/brentp/geneimpacts", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "prioritize effects of variant annotations from VEP, SnpEff, et al.", + "uid": "github/raddleverse/MimiBRICK.jl", + "url": "https://github.com/raddleverse/MimiBRICK.jl", + "rel": "/software/repository/github/raddleverse/MimiBRICK.jl", + "avatar": "https://avatars.githubusercontent.com/u/66496801?v=4", + "description": null, "topics": [] }, { - "uid": "github/brentp/cyvcf2", - "url": "https://github.com/brentp/cyvcf2", - "rel": "/software/repository/github/brentp/cyvcf2", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "a cython wrapper around htslib built for fast parsing of Variant Call Format (VCF) files.", - "topics": [ - "vcf", - "htslib", - "cython", - "genomics", - "bioinformatics" - ] + "uid": "github/liuhong-jia/scAnno", + "url": "https://github.com/liuhong-jia/scAnno", + "rel": "/software/repository/github/liuhong-jia/scAnno", + "avatar": "https://avatars.githubusercontent.com/u/115637576?v=4", + "description": null, + "topics": [] }, { - "uid": "github/brentp/cigar", - "url": "https://github.com/brentp/cigar", - "rel": "/software/repository/github/brentp/cigar", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "simple library for dealing with SAM cigar strings", + "uid": "github/esquivas/guacho", + "url": "https://github.com/esquivas/guacho", + "rel": "/software/repository/github/esquivas/guacho", + "avatar": "https://avatars.githubusercontent.com/u/7807803?v=4", + "description": "A 3D uniform mesh parallel HD/MHD code for astrophysics", "topics": [] }, { - "uid": "github/brentp/somalier", - "url": "https://github.com/brentp/somalier", - "rel": "/software/repository/github/brentp/somalier", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "fast sample-swap and relatedness checks on BAMs/CRAMs/VCFs/GVCFs... \"like damn that is one smart wine guy\"", + "uid": "github/sourmash-bio/sourmash", + "url": "https://github.com/sourmash-bio/sourmash", + "rel": "/software/repository/github/sourmash-bio/sourmash", + "avatar": "https://avatars.githubusercontent.com/u/59402508?v=4", + "description": "Quickly search, compare, and analyze genomic and metagenomic data sets.", "topics": [ - "cancer-genomics", + "minhash", "bioinformatics", - "genomics" + "rust", + "python", + "sourmash" ] }, { - "uid": "github/brentp/mosdepth", - "url": "https://github.com/brentp/mosdepth", - "rel": "/software/repository/github/brentp/mosdepth", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing", - "topics": [ - "coverage", - "genome", - "depth", - "exome", - "wgs", - "sequencing", - "nim", - "nim-lang", - "hacktoberfest" + "uid": "github/amromics/panta", + "url": "https://github.com/amromics/panta", + "rel": "/software/repository/github/amromics/panta", + "avatar": "https://avatars.githubusercontent.com/u/41135580?v=4", + "description": "Pan-genome Analysis", + "topics": [] + }, + { + "uid": "github/annayqho/TheCannon", + "url": "https://github.com/annayqho/TheCannon", + "rel": "/software/repository/github/annayqho/TheCannon", + "avatar": "https://avatars.githubusercontent.com/u/8926184?v=4", + "description": "a data-driven method for determining stellar parameters and abundances from stellar spectra", + "topics": [] + }, + { + "uid": "github/GOALS-survey/CAFE", + "url": "https://github.com/GOALS-survey/CAFE", + "rel": "/software/repository/github/GOALS-survey/CAFE", + "avatar": "https://avatars.githubusercontent.com/u/121973992?v=4", + "description": "Spectral decomposition that works for astronomical data", + "topics": [] + }, + { + "uid": "github/ni1o1/transbigdata", + "url": "https://github.com/ni1o1/transbigdata", + "rel": "/software/repository/github/ni1o1/transbigdata", + "avatar": "https://avatars.githubusercontent.com/u/53589767?v=4", + "description": "A Python package develop for transportation spatio-temporal big data processing, analysis and visualization.", + "topics": [ + "python", + "data-visualization", + "data-analysis", + "transportation", + "spatio-temporal-data", + "geospatial-data", + "data-quality-analysis", + "data-pre-processing", + "taxi-gps-data", + "bus-gps-data", + "bike-sharing-data" ] }, { - "uid": "github/brentp/hts-nim-tools", - "url": "https://github.com/brentp/hts-nim-tools", - "rel": "/software/repository/github/brentp/hts-nim-tools", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "useful command-line tools written to showcase hts-nim", - "topics": [ - "genomics", - "bioinformatics", - "nim", - "nim-lang", - "bam", - "vcf", - "vcf-filtering" - ] + "uid": "github/Gabaldonlab/crossmapper", + "url": "https://github.com/Gabaldonlab/crossmapper", + "rel": "/software/repository/github/Gabaldonlab/crossmapper", + "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", + "description": "Crossmapper software", + "topics": [] }, { - "uid": "github/brentp/kexpr-nim", - "url": "https://github.com/brentp/kexpr-nim", - "rel": "/software/repository/github/brentp/kexpr-nim", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "nim wrapper for Heng Li's kexpr math expression evaluator library", - "topics": [ - "nim-lang", - "math-expressions", - "math", - "evaluator" - ] + "uid": "github/Gabaldonlab/karyon", + "url": "https://github.com/Gabaldonlab/karyon", + "rel": "/software/repository/github/Gabaldonlab/karyon", + "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", + "description": "This is the Karyon Pipeline", + "topics": [] }, { - "uid": "github/brentp/goleft", - "url": "https://github.com/brentp/goleft", - "rel": "/software/repository/github/brentp/goleft", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary", - "topics": [ - "genomics", - "bioinformatics", - "coverage", - "golang", - "depth" - ] + "uid": "github/Gabaldonlab/perSVade", + "url": "https://github.com/Gabaldonlab/perSVade", + "rel": "/software/repository/github/Gabaldonlab/perSVade", + "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", + "description": "perSVade: personalized Structural Variation detection", + "topics": [] }, { - "uid": "github/brentp/smoove", - "url": "https://github.com/brentp/smoove", - "rel": "/software/repository/github/brentp/smoove", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "structural variant calling and genotyping with existing tools, but, smoothly.", + "uid": "github/Gabaldonlab/jloh", + "url": "https://github.com/Gabaldonlab/jloh", + "rel": "/software/repository/github/Gabaldonlab/jloh", + "avatar": "https://avatars.githubusercontent.com/u/9263059?v=4", + "description": "A tool to extract LOH blocks from VCF, BAM and FASTA data", "topics": [ - "structural-variation", - "genomics", - "lumpy" + "heterozygosity", + "bioinformatics", + "genomics" ] }, { - "uid": "github/brentp/nim-lapper", - "url": "https://github.com/brentp/nim-lapper", - "rel": "/software/repository/github/brentp/nim-lapper", - "avatar": "https://avatars.githubusercontent.com/u/1739?v=4", - "description": "fast easy interval overlapping for nim-lang", - "topics": [ - "nim-lang", - "interval", - "search", - "nim", - "overlap" - ] + "uid": "github/ihmwg/python-modelcif", + "url": "https://github.com/ihmwg/python-modelcif", + "rel": "/software/repository/github/ihmwg/python-modelcif", + "avatar": "https://avatars.githubusercontent.com/u/19265055?v=4", + "description": " Python package for handling ModelCIF mmCIF and BinaryCIF files ", + "topics": [] }, { - "uid": "github/mdolab/pygeo", - "url": "https://github.com/mdolab/pygeo", - "rel": "/software/repository/github/mdolab/pygeo", - "avatar": "https://avatars.githubusercontent.com/u/26934866?v=4", - "description": "pyGeo provides geometric design variables and constraints suitable for gradient-based optimization.", + "uid": "github/Battery-Intelligence-Lab/dtw-cpp", + "url": "https://github.com/Battery-Intelligence-Lab/dtw-cpp", + "rel": "/software/repository/github/Battery-Intelligence-Lab/dtw-cpp", + "avatar": "https://avatars.githubusercontent.com/u/93661605?v=4", + "description": "DTWC++", "topics": [ - "mach" + "dynamic-time-warping", + "time-series-clustering" ] }, { - "uid": "github/tibordome/cosmic_profiles", - "url": "https://github.com/tibordome/cosmic_profiles", - "rel": "/software/repository/github/tibordome/cosmic_profiles", - "avatar": "https://avatars.githubusercontent.com/u/64734836?v=4", - "description": "Implements 3D point cloud algorithms for estimation and fitting of shape and density profiles", - "topics": [ - "astronomy", - "cosmological-simulations", - "point-cloud" - ] + "uid": "github/ugovaretto/molekel", + "url": "https://github.com/ugovaretto/molekel", + "rel": "/software/repository/github/ugovaretto/molekel", + "avatar": "https://avatars.githubusercontent.com/u/1543376?v=4", + "description": "molekel", + "topics": [] }, { - "uid": "github/reneshbedre/bioinfokit", - "url": "https://github.com/reneshbedre/bioinfokit", - "rel": "/software/repository/github/reneshbedre/bioinfokit", - "avatar": "https://avatars.githubusercontent.com/u/37003729?v=4", - "description": "The bioinfokit toolkit aims to provide various easy-to-use functionalities to analyze, visualize, and interpret the biological data generated from genome-scale omics experiments.", + "uid": "github/egjergo/galcem", + "url": "https://github.com/egjergo/GalCEM", + "rel": "/software/repository/github/egjergo/galcem", + "avatar": "https://avatars.githubusercontent.com/u/7225502?v=4", + "description": "Please email us to get a JupyterHub account, or for any other queries", "topics": [] }, { - "uid": "github/jbussemaker/SBArchOpt", - "url": "https://github.com/jbussemaker/SBArchOpt", - "rel": "/software/repository/github/jbussemaker/SBArchOpt", - "avatar": "https://avatars.githubusercontent.com/u/6481229?v=4", - "description": "Surrogate-Based Architecture Optimization toolbox", - "topics": [ - "architecture", - "multi-objective", - "optimization", - "sbo", - "system" - ] + "uid": "github/radio-astro-tools/spectral-cube", + "url": "https://github.com/radio-astro-tools/spectral-cube", + "rel": "/software/repository/github/radio-astro-tools/spectral-cube", + "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", + "description": "Library for reading and analyzing astrophysical spectral data cubes", + "topics": [] }, { - "uid": "github/PolymathicAI/AstroCLIP", - "url": "https://github.com/PolymathicAI/AstroCLIP", - "rel": "/software/repository/github/PolymathicAI/AstroCLIP", - "avatar": "https://avatars.githubusercontent.com/u/137177858?v=4", - "description": "Multimodal contrastive pretraining for astronomical data", + "uid": "github/radio-astro-tools/pvextractor", + "url": "https://github.com/radio-astro-tools/pvextractor", + "rel": "/software/repository/github/radio-astro-tools/pvextractor", + "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", + "description": "Position-Velocity diagram extract (but it can slice out other things too)", "topics": [] }, { - "uid": "github/HengyueZ/astrofix", - "url": "https://github.com/HengyueZ/astrofix", - "rel": "/software/repository/github/HengyueZ/astrofix", - "avatar": "https://avatars.githubusercontent.com/u/67264128?v=4", - "description": "Correcting Astronomical Bad Pixels in Python", + "uid": "github/radio-astro-tools/uvcombine", + "url": "https://github.com/radio-astro-tools/uvcombine", + "rel": "/software/repository/github/radio-astro-tools/uvcombine", + "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", + "description": "Combine images made with different resolutions, including the \"feathering\" technique for interferometry data.", "topics": [] }, { - "uid": "github/qiangyicheng/flory", - "url": "https://github.com/qiangyicheng/flory", - "rel": "/software/repository/github/qiangyicheng/flory", - "avatar": "https://avatars.githubusercontent.com/u/47470964?v=4", - "description": "Python package for finding coexisting phases in multicomponent mixtures.", + "uid": "github/akashdhruv/BoxKit", + "url": "https://github.com/Box-Tools/BoxKit", + "rel": "/software/repository/github/akashdhruv/BoxKit", + "avatar": "https://avatars.githubusercontent.com/u/99517266?v=4", + "description": "A Python library to manage analysis of block-structured simulation datasets.", "topics": [] }, { - "uid": "github/NathanSkene/EWCE", - "url": "https://github.com/NathanSkene/EWCE", - "rel": "/software/repository/github/NathanSkene/EWCE", - "avatar": "https://avatars.githubusercontent.com/u/33265555?v=4", - "description": "Expression Weighted Celltype Enrichment. See the package website for up-to-date instructions on usage.", + "uid": "github/oskarhs/AutoHist.jl", + "url": "https://github.com/oskarhs/AutoHist.jl", + "rel": "/software/repository/github/oskarhs/AutoHist.jl", + "avatar": "https://avatars.githubusercontent.com/u/47379891?v=4", + "description": "Fast and automatic histogram construction in Julia", "topics": [ - "transcriptomics", - "single-cell", - "single-cell-rna-seq", - "deconvolution" + "histogram", + "julia", + "julia-package", + "statistics" ] }, { - "uid": "github/NathanSkene/MAGMA_Celltyping", - "url": "https://github.com/neurogenomics/MAGMA_Celltyping", - "rel": "/software/repository/github/NathanSkene/MAGMA_Celltyping", - "avatar": "https://avatars.githubusercontent.com/u/48588661?v=4", - "description": "Find causal cell-types underlying complex trait genetics", + "uid": "github/r-lib/gert", + "url": "https://github.com/r-lib/gert", + "rel": "/software/repository/github/r-lib/gert", + "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", + "description": "Simple git client for R", "topics": [ - "gwas", - "genomics", - "single-cell-omics", - "magma" + "scalereprod" ] }, { - "uid": "github/jodyphelan/TBProfiler", - "url": "https://github.com/jodyphelan/TBProfiler", - "rel": "/software/repository/github/jodyphelan/TBProfiler", - "avatar": "https://avatars.githubusercontent.com/u/8697224?v=4", - "description": "Profiling tool for Mycobacterium tuberculosis to detect ressistance and strain type from WGS data", + "uid": "github/r-lib/credentials", + "url": "https://github.com/r-lib/credentials", + "rel": "/software/repository/github/r-lib/credentials", + "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", + "description": "Tools for Managing SSH and Git Credentials", "topics": [ - "drug-resistance", - "tb-profiler" + "scalereprod" ] }, { - "uid": "github/jodyphelan/tb-ml", - "url": "https://github.com/jodyphelan/tb-ml", - "rel": "/software/repository/github/jodyphelan/tb-ml", - "avatar": "https://avatars.githubusercontent.com/u/8697224?v=4", - "description": "A simple tool for creating machine learning antimicrobial resistance prediction pipelines using Docker containers for M. tuberculosis", + "uid": "github/r-lib/lintr", + "url": "https://github.com/r-lib/lintr", + "rel": "/software/repository/github/r-lib/lintr", + "avatar": "https://avatars.githubusercontent.com/u/22618716?v=4", + "description": "Static Code Analysis for R", "topics": [ - "amr", - "ml" + "linter", + "r" ] }, { - "uid": "github/PNNL-m-q/mza", - "url": "https://github.com/PNNL-m-q/mza", - "rel": "/software/repository/github/PNNL-m-q/mza", - "avatar": "https://avatars.githubusercontent.com/u/105317099?v=4", - "description": "Software to convert multidimensional MS data from files in proprietary vendor formats to HDF5 format in the simple MZA data structure.", + "uid": "github/genotoul-bioinfo/Binette", + "url": "https://github.com/genotoul-bioinfo/Binette", + "rel": "/software/repository/github/genotoul-bioinfo/Binette", + "avatar": "https://avatars.githubusercontent.com/u/36693932?v=4", + "description": "A fast and accurate binning refinement tool to constructs high quality MAGs from the output of multiple binning tools.", "topics": [ - "ion-mobility-spectrometry", - "mass-spectrometry", - "data-conversion" + "bioinformatics-tool", + "metagenomics-binning", + "metagenomics", + "microbiology" ] }, { - "uid": "github/dsheward-astro/pynaple", - "url": "https://github.com/dsheward-astro/PyNAPLE", - "rel": "/software/repository/github/dsheward-astro/pynaple", - "avatar": "https://avatars.githubusercontent.com/u/56971042?v=4", - "description": "Python NAC Automated Pair Lunar Evaluator", - "topics": [] + "uid": "github/genotoul-bioinfo/dgenies", + "url": "https://github.com/genotoul-bioinfo/dgenies", + "rel": "/software/repository/github/genotoul-bioinfo/dgenies", + "avatar": "https://avatars1.githubusercontent.com/u/36693932?v=4", + "description": "Dotplot large Genomes in an Interactive, Efficient and Simple way", + "topics": [ + "inra", + "genotoul", + "bioinformatics", + "dotplot", + "genome", + "comparision" + ] }, { - "uid": "github/fkiwy/Finder_charts", - "url": "https://github.com/fkiwy/Finder_charts", - "rel": "/software/repository/github/fkiwy/Finder_charts", - "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", - "description": "A Python module to create finder charts from image data of various sky surveys", - "topics": [] + "uid": "github/pawni/BayesByHypernet", + "url": "https://github.com/pawni/BayesByHypernet", + "rel": "/software/repository/github/pawni/BayesByHypernet", + "avatar": "https://avatars.githubusercontent.com/u/2412413?v=4", + "description": "Code for the paper Implicit Weight Uncertainty in Neural Networks", + "topics": [ + "deep-learning", + "variational-inference", + "deep-neural-networks", + "tensorflow", + "bayesian-neural-networks" + ] }, { - "uid": "github/fkiwy/unTimely_Catalog_explorer", - "url": "https://github.com/fkiwy/unTimely_Catalog_explorer", - "rel": "/software/repository/github/fkiwy/unTimely_Catalog_explorer", - "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", - "description": "A search and visualization tool for the unTimely Catalog", + "uid": "github/mlysy/LocalCop", + "url": "https://github.com/mlysy/LocalCop", + "rel": "/software/repository/github/mlysy/LocalCop", + "avatar": "https://avatars.githubusercontent.com/u/10173557?v=4", + "description": "Local Likelihood Inference for Conditional Copulas", "topics": [] }, { - "uid": "github/fkiwy/AstroToolBox", - "url": "https://github.com/fkiwy/AstroToolBox", - "rel": "/software/repository/github/fkiwy/AstroToolBox", - "avatar": "https://avatars.githubusercontent.com/u/54667906?v=4", - "description": "Java tool set for the identification and classification of astronomical objects with a focus on low-mass stars and ultra-cool dwarfs", + "uid": "github/mpeel/fastcc", + "url": "https://github.com/mpeel/fastcc", + "rel": "/software/repository/github/mpeel/fastcc", + "avatar": "https://avatars.githubusercontent.com/u/710707?v=4", + "description": "Fast colour corrections for Planck/WMAP/QUIJOTE etc.", "topics": [] }, { - "uid": "github/ExoplanetML/Nigraha", - "url": "https://github.com/ExoplanetML/Nigraha", - "rel": "/software/repository/github/ExoplanetML/Nigraha", - "avatar": "https://avatars.githubusercontent.com/u/77851194?v=4", - "description": "A neural network based pipeline to identify and evaluate planet candidates from TESS light curves.", - "topics": [] + "uid": "github/spacetelescope/synphot_refactor", + "url": "https://github.com/spacetelescope/synphot_refactor", + "rel": "/software/repository/github/spacetelescope/synphot_refactor", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Synthetic photometry using Astropy", + "topics": [ + "astronomy", + "astropy", + "synthetic-photometry", + "python", + "synphot" + ] }, { - "uid": "github/ConesaLab/MOSim", - "url": "https://github.com/ConesaLab/MOSim", - "rel": "/software/repository/github/ConesaLab/MOSim", - "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", - "description": "Bulk and single-cell Multi-Omics ground truth Simulator in R", + "uid": "github/spacetelescope/hst_cosmic_rays", + "url": "https://github.com/spacetelescope/hst_cosmic_rays", + "rel": "/software/repository/github/spacetelescope/hst_cosmic_rays", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": null, "topics": [] }, { - "uid": "github/ConesaLab/MultiPower", - "url": "https://github.com/ConesaLab/MultiPower", - "rel": "/software/repository/github/ConesaLab/MultiPower", - "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", - "description": "Statistical power studies for multi-omics experiments.", - "topics": [] + "uid": "github/spacetelescope/stsynphot_refactor", + "url": "https://github.com/spacetelescope/stsynphot_refactor", + "rel": "/software/repository/github/spacetelescope/stsynphot_refactor", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Synthetic photometry using Astropy for HST and JWST", + "topics": [ + "astronomy", + "python", + "astropy", + "synthetic-photometry", + "synphot", + "hst", + "jwst" + ] }, { - "uid": "github/ConesaLab/SQANTI3", - "url": "https://github.com/ConesaLab/SQANTI3", - "rel": "/software/repository/github/ConesaLab/SQANTI3", - "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", - "description": "Tool for the Quality Control of Long-Read Defined Transcriptomes", + "uid": "github/spacetelescope/spaceKLIP", + "url": "https://github.com/spacetelescope/spaceKLIP", + "rel": "/software/repository/github/spacetelescope/spaceKLIP", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Pipeline for reducing JWST high-contrast imaging data. Published in Kammerer et al. 2022 and Carter et al. 2022.", "topics": [] }, { - "uid": "github/GilbertLabUCSF/CanDI", - "url": "https://github.com/GilbertLabUCSF/CanDI", - "rel": "/software/repository/github/GilbertLabUCSF/CanDI", - "avatar": "https://avatars.githubusercontent.com/u/81225660?v=4", - "description": "CanDI - A global cancer data integrator", + "uid": "github/spacetelescope/astronify", + "url": "https://github.com/spacetelescope/astronify", + "rel": "/software/repository/github/spacetelescope/astronify", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Astronomical data sonification.", "topics": [ - "cancer-research", - "database", - "depmap" + "astronomy", + "sonification" ] }, { - "uid": "github/alan-turing-institute/autoemulate", - "url": "https://github.com/alan-turing-institute/autoemulate", - "rel": "/software/repository/github/alan-turing-institute/autoemulate", - "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", - "description": "Emulate simulations easily", + "uid": "github/spacetelescope/specview", + "url": "https://github.com/spacetelescope/specview", + "rel": "/software/repository/github/spacetelescope/specview", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Archived, see https://github.com/spacetelescope/specviz for future development. Spectrum visualization, manipulation, and fitting", "topics": [ - "hut23", - "hut23-1468" + "spectroscopy", + "astronomy", + "viewer", + "data-analysis" ] }, { - "uid": "github/alan-turing-institute/monitoring-ecosystem-resilience", - "url": "https://github.com/alan-turing-institute/monitoring-ecosystem-resilience", - "rel": "/software/repository/github/alan-turing-institute/monitoring-ecosystem-resilience", - "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", - "description": "Repository for mini-projects in the Data science for Sustainable development project ", - "topics": [ - "hut23", - "hut23-240" - ] + "uid": "github/spacetelescope/pystortion", + "url": "https://github.com/spacetelescope/pystortion", + "rel": "/software/repository/github/spacetelescope/pystortion", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": null, + "topics": [] }, { - "uid": "github/alan-turing-institute/DetectorChecker", - "url": "https://github.com/alan-turing-institute/DetectorChecker", - "rel": "/software/repository/github/alan-turing-institute/DetectorChecker", - "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", - "description": " Project to develop software to assess developing detector screen damage (Web App based on the original DetectorChecker package)", + "uid": "github/spacetelescope/imexam", + "url": "https://github.com/spacetelescope/imexam", + "rel": "/software/repository/github/spacetelescope/imexam", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "imexam is a python tool for simple image examination, and plotting, with similar functionality to IRAF's imexamine", "topics": [ - "hut23", - "hut23-122" + "astronomy", + "data-analysis", + "viewer", + "astropy", + "ds9", + "ginga" ] }, { - "uid": "github/alan-turing-institute/MLJ.jl", - "url": "https://github.com/alan-turing-institute/MLJ.jl", - "rel": "/software/repository/github/alan-turing-institute/MLJ.jl", - "avatar": "https://avatars1.githubusercontent.com/u/18304793?v=4", - "description": "A Julia machine learning framework", + "uid": "github/spacetelescope/specviz", + "url": "https://github.com/spacetelescope/specviz", + "rel": "/software/repository/github/spacetelescope/specviz", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "An interactive astronomical 1D spectra analysis tool.", "topics": [ - "machine-learning", - "julia", - "pipelines", - "tuning", - "data-science", - "tuning-parameters", - "predictive-modeling", - "classification", - "regression", - "statistics", - "clustering", - "stacking", - "ensemble-learning", - "pipeline" + "astronomy", + "spectroscopy", + "viewer", + "data-analysis", + "python" ] }, { - "uid": "github/alan-turing-institute/Palaeoanalytics", - "url": "https://github.com/alan-turing-institute/Palaeoanalytics", - "rel": "/software/repository/github/alan-turing-institute/Palaeoanalytics", - "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", - "description": "Repository for the Paleoanalytics project.", - "topics": [ - "hut23", - "hut23-530" - ] + "uid": "github/spacetelescope/jdaviz", + "url": "https://github.com/spacetelescope/jdaviz", + "rel": "/software/repository/github/spacetelescope/jdaviz", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "JWST astronomical data analysis tools in the Jupyter platform", + "topics": [] }, { - "uid": "github/alan-turing-institute/setvis", - "url": "https://github.com/alan-turing-institute/setvis", - "rel": "/software/repository/github/alan-turing-institute/setvis", - "avatar": "https://avatars.githubusercontent.com/u/18304793?v=4", - "description": "A tool for visualising set membership and patterns of missingness in data", + "uid": "github/spacetelescope/exovetter", + "url": "https://github.com/spacetelescope/exovetter", + "rel": "/software/repository/github/spacetelescope/exovetter", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Exoplanet vetting", "topics": [ - "hut23", - "hut23-845", - "bokeh", - "jupyter-notebook", - "missing-data", - "python", - "set-visualization" + "astronomy", + "exoplanets", + "verification", + "exoplanet-transits" ] }, { - "uid": "github/iquasere/UPIMAPI", - "url": "https://github.com/iquasere/UPIMAPI", - "rel": "/software/repository/github/iquasere/UPIMAPI", - "avatar": "https://avatars.githubusercontent.com/u/16226371?v=4", - "description": "UniProt Id Mapping through API", - "topics": [ - "genomics", - "uniprot", - "id-mapping", - "functional-information", - "taxonomic-information" - ] + "uid": "github/spacetelescope/stsdas_stripped", + "url": "https://github.com/spacetelescope/stsdas_stripped", + "rel": "/software/repository/github/spacetelescope/stsdas_stripped", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "STSDAS/TABLES (nonfunctional / for reference only)", + "topics": [] }, { - "uid": "github/MillionConcepts/lhorizon", - "url": "https://github.com/MillionConcepts/lhorizon", - "rel": "/software/repository/github/MillionConcepts/lhorizon", - "avatar": "https://avatars.githubusercontent.com/u/56450892?v=4", - "description": "lhorizon helps you find things in the Solar System.", + "uid": "github/spacetelescope/stginga", + "url": "https://github.com/spacetelescope/stginga", + "rel": "/software/repository/github/spacetelescope/stginga", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "Ginga products specific to STScI data analysis.", "topics": [ - "python", - "planetary-science", - "ephemerides" + "astronomy", + "image", + "table", + "viewer", + "astropy", + "ginga" ] }, { - "uid": "github/skypyproject/skypy", - "url": "https://github.com/skypyproject/skypy", - "rel": "/software/repository/github/skypyproject/skypy", - "avatar": "https://avatars.githubusercontent.com/u/57487530?v=4", - "description": "SkyPy: A package for modelling the Universe.", + "uid": "github/spacetelescope/mirage", + "url": "https://github.com/spacetelescope/mirage", + "rel": "/software/repository/github/spacetelescope/mirage", + "avatar": "https://avatars.githubusercontent.com/u/2751928?v=4", + "description": "This code can be used to generate simulated NIRCam, NIRISS, or FGS data ", "topics": [ "astronomy", - "astrophysics", - "cosmology", - "forward-modeling", - "skypy" + "simulator", + "nircam", + "niriss", + "fgs" ] }, { - "uid": "github/tommyau/bamclipper", - "url": "https://github.com/tommyau/bamclipper", - "rel": "/software/repository/github/tommyau/bamclipper", - "avatar": "https://avatars.githubusercontent.com/u/12424384?v=4", - "description": "Remove primer sequence from BAM alignments by soft-clipping", + "uid": "github/YihanWangAstro/SpaceHub", + "url": "https://github.com/YihanWangAstro/SpaceHub", + "rel": "/software/repository/github/YihanWangAstro/SpaceHub", + "avatar": "https://avatars.githubusercontent.com/u/26609492?v=4", + "description": "SpaceHub", "topics": [] }, { - "uid": "github/CDCgov/BART-Survival", - "url": "https://github.com/CDCgov/BART-Survival", - "rel": "/software/repository/github/CDCgov/BART-Survival", - "avatar": "https://avatars.githubusercontent.com/u/12104975?v=4", - "description": null, + "uid": "github/vitor-de-oliveira/rheovolution", + "url": "https://github.com/vitor-de-oliveira/rheovolution", + "rel": "/software/repository/github/vitor-de-oliveira/rheovolution", + "avatar": "https://avatars.githubusercontent.com/u/52892492?v=4", + "description": "Software for numerically investigating the tidal evolution of celestial bodies", "topics": [] }, { - "uid": "github/ThomasEdwardRiley/xpsi-pre-transfer", - "url": "https://github.com/ThomasEdwardRiley/xpsi-pre-transfer", - "rel": "/software/repository/github/ThomasEdwardRiley/xpsi-pre-transfer", - "avatar": "https://avatars.githubusercontent.com/u/25251452?v=4", - "description": "X-PSI: X-ray Pulse Simulation and Inference", + "uid": "github/jiahecui/SenAOReFoc", + "url": "https://github.com/jiahecui/SenAOReFoc", + "rel": "/software/repository/github/jiahecui/SenAOReFoc", + "avatar": "https://avatars.githubusercontent.com/u/44090103?v=4", + "description": "A closed-loop sensorbased adaptive optics and remote focusing control software that works with a deformable mirror and a Shack-Hartmann wavefront sensor.", "topics": [] }, { - "uid": "github/wchenastro/Mosaic", - "url": "https://github.com/wchenastro/Mosaic", - "rel": "/software/repository/github/wchenastro/Mosaic", - "avatar": "https://avatars.githubusercontent.com/u/34242412?v=4", - "description": null, + "uid": "github/zhanglabtools/CASAVA", + "url": "https://github.com/zhanglabtools/CASAVA", + "rel": "/software/repository/github/zhanglabtools/CASAVA", + "avatar": "https://avatars.githubusercontent.com/u/37131175?v=4", + "description": "Resources of our paper CASAVA", "topics": [] }, { - "uid": "github/ELeeAstro/gCMCRT", - "url": "https://github.com/ELeeAstro/gCMCRT", - "rel": "/software/repository/github/ELeeAstro/gCMCRT", - "avatar": "https://avatars.githubusercontent.com/u/38210132?v=4", - "description": "3D Monte Carlo Radiative Transfer for exoplanet atmospheres using GPUs.", + "uid": "github/astro-seanwhy/ExoInt", + "url": "https://github.com/astro-seanwhy/ExoInt", + "rel": "/software/repository/github/astro-seanwhy/ExoInt", + "avatar": "https://avatars.githubusercontent.com/u/30588030?v=4", + "description": "Rocky planets as devolatilized stars (Source codes for Wang et al. 2019, MNRAS, doi.org/10.1093/mnras/sty2749). Purpose: devolatilize stellar abundances to produce rocky exoplanetary bulk composition, with which constrain the modelling of the exoplanet interiors. ", "topics": [] }, { - "uid": "github/ELeeAstro/mini_chem", - "url": "https://github.com/ELeeAstro/mini_chem", - "rel": "/software/repository/github/ELeeAstro/mini_chem", - "avatar": "https://avatars.githubusercontent.com/u/38210132?v=4", - "description": "An efficient, lightweight chemical kinetic scheme for GCM models.", + "uid": "github/CIRADA-Tools/RM-Tools", + "url": "https://github.com/CIRADA-Tools/RM-Tools", + "rel": "/software/repository/github/CIRADA-Tools/RM-Tools", + "avatar": "https://avatars.githubusercontent.com/u/49538616?v=4", + "description": "RM-synthesis, RM-clean and QU-fitting on polarised radio spectra", "topics": [] }, { - "uid": "github/Punzo/SlicerAstro", - "url": "https://github.com/Punzo/SlicerAstro", - "rel": "/software/repository/github/Punzo/SlicerAstro", - "avatar": "https://avatars.githubusercontent.com/u/7985338?v=4", - "description": "Astronomy (HI) extension for 3DSlicer (https://www.slicer.org/)", - "topics": [ - "astronomy", - "3d", - "visualization", - "3dslicer", - "image-processing", - "visual-analytics", - "c-plus-plus" - ] - }, - { - "uid": "github/cistrome/MIRA", - "url": "https://github.com/cistrome/MIRA", - "rel": "/software/repository/github/cistrome/MIRA", - "avatar": "https://avatars.githubusercontent.com/u/92589386?v=4", - "description": "Python package for analysis of multiomic single cell RNA-seq and ATAC-seq.", + "uid": "github/spectrapepper/spectrapepper", + "url": "https://github.com/spectrapepper/spectrapepper", + "rel": "/software/repository/github/spectrapepper/spectrapepper", + "avatar": "https://avatars.githubusercontent.com/u/91056904?v=4", + "description": "A Python package for advanced processing and combinatorial analysis of spectroscopy data.", "topics": [] }, { - "uid": "github/johnh2o2/cuvarbase", - "url": "https://github.com/johnh2o2/cuvarbase", - "rel": "/software/repository/github/johnh2o2/cuvarbase", - "avatar": "https://avatars.githubusercontent.com/u/5678551?v=4", - "description": "Python library for fast time-series analysis on CUDA GPUs", - "topics": [ - "time-series", - "nfft", - "lomb-scargle-periodogram", - "fourier-methods", - "cuda", - "python", - "python-3", - "gpu-computing", - "gpu" - ] + "uid": "github/JoeMcEwen/FAST-PT", + "url": "https://github.com/JoeMcEwen/FAST-PT", + "rel": "/software/repository/github/JoeMcEwen/FAST-PT", + "avatar": "https://avatars.githubusercontent.com/u/8403883?v=4", + "description": null, + "topics": [] }, { - "uid": "github/meinardmueller/synctoolbox", - "url": "https://github.com/meinardmueller/synctoolbox", - "rel": "/software/repository/github/meinardmueller/synctoolbox", - "avatar": "https://avatars.githubusercontent.com/u/40728202?v=4", - "description": "Sync Toolbox - Python package with reference implementations for efficient, robust, and accurate music synchronization based on dynamic time warping (DTW)", - "topics": [ - "dtw", - "python", - "synchronization", - "music", - "chromagram", - "onset" - ] + "uid": "github/joe-antognini/kozai", + "url": "https://github.com/joe-antognini/kozai", + "rel": "/software/repository/github/joe-antognini/kozai", + "avatar": "https://avatars.githubusercontent.com/u/7061933?v=4", + "description": "A Python package to evolve hierarchical triples in the secular approximation", + "topics": [] }, { - "uid": "github/meinardmueller/libfmp", - "url": "https://github.com/meinardmueller/libfmp", - "rel": "/software/repository/github/meinardmueller/libfmp", - "avatar": "https://avatars.githubusercontent.com/u/40728202?v=4", + "uid": "github/NCAR/NCAR-Classic-Libraries-for-Geophysics", + "url": "https://github.com/NCAR/NCAR-Classic-Libraries-for-Geophysics", + "rel": "/software/repository/github/NCAR/NCAR-Classic-Libraries-for-Geophysics", + "avatar": "https://avatars.githubusercontent.com/u/2007542?v=4", "description": null, "topics": [] }, { - "uid": "github/euclidlib/euclidlib", - "url": "https://github.com/euclidlib/euclidlib", - "rel": "/software/repository/github/euclidlib/euclidlib", - "avatar": "https://avatars.githubusercontent.com/u/160159153?v=4", - "description": "Unofficial python library for reading data products from the Euclid mission", - "topics": [ - "cosmology", - "euclid", - "library", - "python" - ] + "uid": "github/CTU-Bern/presize", + "url": "https://github.com/CTU-Bern/presize", + "rel": "/software/repository/github/CTU-Bern/presize", + "avatar": "https://avatars.githubusercontent.com/u/45794307?v=4", + "description": "Precision Based Sample Size Calculation", + "topics": [] }, { - "uid": "github/pierrehoudayer/RUBIS", - "url": "https://github.com/pierrehoudayer/RUBIS", - "rel": "/software/repository/github/pierrehoudayer/RUBIS", - "avatar": "https://avatars.githubusercontent.com/u/91544829?v=4", - "description": "Rotation code Using Barotropy conservation over Isopotential Surfaces (RUBIS)", + "uid": "github/mjacob1002/Eir", + "url": "https://github.com/mjacob1002/Eir", + "rel": "/software/repository/github/mjacob1002/Eir", + "avatar": "https://avatars.githubusercontent.com/u/63362973?v=4", + "description": "Eir is a package that helps researchers simulate the spread of epidemics, mainly focusing on discrete-time Markovian spatial models. ", "topics": [] }, { - "uid": "github/zhanghe9704/tpsa_sym", - "url": "https://github.com/zhanghe9704/tpsa_sym", - "rel": "/software/repository/github/zhanghe9704/tpsa_sym", - "avatar": "https://avatars.githubusercontent.com/u/8061962?v=4", - "description": null, + "uid": "github/zhangrengang/SubPhaser", + "url": "https://github.com/zhangrengang/SubPhaser", + "rel": "/software/repository/github/zhangrengang/SubPhaser", + "avatar": "https://avatars.githubusercontent.com/u/22489982?v=4", + "description": "Phase and visualize subgenomes of an allopolyploid or hybrid based on the repetitive kmers.", + "topics": [ + "allopolyploid", + "subgenome", + "phase", + "kmer" + ] + }, + { + "uid": "github/vbakis/mrs", + "url": "https://github.com/vbakis/mrs", + "rel": "/software/repository/github/vbakis/mrs", + "avatar": "https://avatars.githubusercontent.com/u/80822881?v=4", + "description": "This repository is created for the MOS Reduction Software.", "topics": [] }, { - "uid": "github/zhanghe9704/tpsa", - "url": "https://github.com/zhanghe9704/tpsa", - "rel": "/software/repository/github/zhanghe9704/tpsa", - "avatar": "https://avatars.githubusercontent.com/u/8061962?v=4", - "description": "C++ and Python TPSA/DA codes", + "uid": "github/Taywee/args", + "url": "https://github.com/Taywee/args", + "rel": "/software/repository/github/Taywee/args", + "avatar": "https://avatars.githubusercontent.com/u/1069915?v=4", + "description": " A simple header-only C++ argument parser library. Supposed to be flexible and powerful, and attempts to be compatible with the functionality of the Python standard argparse library (though not necessarily the API).", "topics": [] }, { - "uid": "github/nservant/HiC-Pro", - "url": "https://github.com/nservant/HiC-Pro", - "rel": "/software/repository/github/nservant/HiC-Pro", - "avatar": "https://avatars.githubusercontent.com/u/10778219?v=4", - "description": "HiC-Pro: An optimized and flexible pipeline for Hi-C data processing", + "uid": "github/NREL/OpenOA", + "url": "https://github.com/NREL/OpenOA", + "rel": "/software/repository/github/NREL/OpenOA", + "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", + "description": "This library provides a framework for working with large timeseries data from wind plants, such as SCADA. Its development has been motivated by the WP3 Benchmarking (PRUF) project, which aims to provide a reference implementation for plant-level performance assessment.", "topics": [] }, { - "uid": "github/bommert/stabm", - "url": "https://github.com/bommert/stabm", - "rel": "/software/repository/github/bommert/stabm", - "avatar": "https://avatars.githubusercontent.com/u/16881642?v=4", - "description": "Stability measures", + "uid": "github/NREL/VirtualEngineering", + "url": "https://github.com/NREL/VirtualEngineering", + "rel": "/software/repository/github/NREL/VirtualEngineering", + "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", + "description": "The Virtual Engineering repository", "topics": [] }, { - "uid": "github/lpantano/seqbuster", - "url": "https://github.com/lpantano/seqbuster", - "rel": "/software/repository/github/lpantano/seqbuster", - "avatar": "https://avatars.githubusercontent.com/u/1621788?v=4", - "description": "pipeline for the analysis of small RNA data", + "uid": "github/NREL/G2Aero", + "url": "https://github.com/NREL/G2Aero", + "rel": "/software/repository/github/NREL/G2Aero", + "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", + "description": "Separable shape tensors for aerodynamic design", "topics": [] }, { - "uid": "github/lpantano/seqcluster", - "url": "https://github.com/lpantano/seqcluster", - "rel": "/software/repository/github/lpantano/seqcluster", - "avatar": "https://avatars.githubusercontent.com/u/1621788?v=4", - "description": "small RNA analysis from NGS data", + "uid": "github/NREL/graph-env", + "url": "https://github.com/NREL/graph-env", + "rel": "/software/repository/github/NREL/graph-env", + "avatar": "https://avatars.githubusercontent.com/u/1906800?v=4", + "description": "Reinforcement learning for combinatorial optimization over directed graphs", "topics": [ - "smallrna", - "mirna", - "trna", - "report", - "sequencing" + "graph-algorithms", + "gym-environment", + "machine-learning", + "python", + "ray", + "reinforcement-learning" ] }, { - "uid": "github/jackmwolf/tehtuner", - "url": "https://github.com/jackmwolf/tehtuner", - "rel": "/software/repository/github/jackmwolf/tehtuner", - "avatar": "https://avatars.githubusercontent.com/u/38739875?v=4", - "description": "An R Package to Fit and Tune to Models to Detect Treatment Effect Heterogeneity ", + "uid": "github/silx-kit/pyFAI", + "url": "https://github.com/silx-kit/pyFAI", + "rel": "/software/repository/github/silx-kit/pyFAI", + "avatar": "https://avatars.githubusercontent.com/u/14869885?v=4", + "description": "Fast Azimuthal Integration in Python", "topics": [ - "r", - "clinical-trials", - "subgroup-identification", - "heterogeneity-of-treatment-effect" + "python", + "diffraction", + "science" ] }, { - "uid": "github/soedinglab/plass", - "url": "https://github.com/soedinglab/plass", - "rel": "/software/repository/github/soedinglab/plass", - "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", - "description": "Protein-Level ASSembler (PLASS): sensitive and precise protein assembler", + "uid": "github/chianti-atomic/ChiantiPy", + "url": "https://github.com/chianti-atomic/ChiantiPy", + "rel": "/software/repository/github/chianti-atomic/ChiantiPy", + "avatar": "https://avatars.githubusercontent.com/u/8628468?v=4", + "description": "ChiantiPy is a python package to calculate the radiative properties of astrophysical plasmas based on the CHIANTI atomic database", "topics": [ - "bioinformatics", - "metagenomics", - "sequence-assembler", - "proteins", - "opensource", - "proteomics", - "metatranscriptomics" + "python", + "chianti-atomic-database", + "chianti", + "spectroscopy", + "astrophysics" ] }, { - "uid": "github/soedinglab/metaeuk", - "url": "https://github.com/soedinglab/metaeuk", - "rel": "/software/repository/github/soedinglab/metaeuk", - "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", - "description": "MetaEuk - sensitive, high-throughput gene discovery and annotation for large-scale eukaryotic metagenomics", - "topics": [ - "metagenomics", - "eukaryotes", - "gene-prediction", - "gene-discovery", - "bioinformatics" - ] + "uid": "github/Tomcxf/FASTdRNA", + "url": "https://github.com/Tomcxf/FASTdRNA", + "rel": "/software/repository/github/Tomcxf/FASTdRNA", + "avatar": "https://avatars.githubusercontent.com/u/75790226?v=4", + "description": "FASTdRNA is a workflow for analysis of ONT direct RNA seq dataset", + "topics": [] }, { - "uid": "github/soedinglab/mmseqs2", - "url": "https://github.com/soedinglab/MMseqs2", - "rel": "/software/repository/github/soedinglab/mmseqs2", - "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", - "description": "MMseqs2: ultra fast and sensitive search and clustering suite", + "uid": "github/phenomecentre/nPYc-Toolbox", + "url": "https://github.com/phenomecentre/nPYc-Toolbox", + "rel": "/software/repository/github/phenomecentre/nPYc-Toolbox", + "avatar": "https://avatars.githubusercontent.com/u/7632103?v=4", + "description": "The nPYc-Toolbox defines objects for representing, and implements functions to manipulate and display, metabolic profiling datasets.", "topics": [ - "bioinformatics", - "sequence-clustering", - "profile-search", - "sequence-search", - "linclust", - "mmseqs", - "metagenomics", - "alignment", - "blast", - "taxonomy" + "quality-control", + "metabolomics", + "metabolic-phenotyping" ] }, { - "uid": "github/soedinglab/spacepharer", - "url": "https://github.com/soedinglab/spacepharer", - "rel": "/software/repository/github/soedinglab/spacepharer", - "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", - "description": "SpacePHARER CRISPR Spacer Phage-Host pAiRs findER", + "uid": "github/Kaixhin/Atari", + "url": "https://github.com/Kaixhin/Atari", + "rel": "/software/repository/github/Kaixhin/Atari", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Persistent advantage learning dueling double DQN for the Arcade Learning Environment", "topics": [ - "crispr", - "host-pathogen", - "sequence-analysis", - "bioinformatics" + "deep-reinforcement-learning", + "deep-learning" ] }, { - "uid": "github/soedinglab/hh-suite", - "url": "https://github.com/soedinglab/hh-suite", - "rel": "/software/repository/github/soedinglab/hh-suite", - "avatar": "https://avatars3.githubusercontent.com/u/7237671?v=4", - "description": "Remote protein homology detection suite.", + "uid": "github/Kaixhin/Rainbow", + "url": "https://github.com/Kaixhin/Rainbow", + "rel": "/software/repository/github/Kaixhin/Rainbow", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Rainbow: Combining Improvements in Deep Reinforcement Learning", "topics": [ - "bioinformatics", - "hh-suite", - "hhblits", - "alignment", - "sequence-search", - "profile-search", - "profile-profile-search", - "opensource", - "cpp", - "hhsearch", - "hhpred", - "protein-structure", - "simd", - "viterbi" + "deep-learning", + "deep-reinforcement-learning" ] }, { - "uid": "github/soedinglab/MMseqs2", - "url": "https://github.com/soedinglab/MMseqs2", - "rel": "/software/repository/github/soedinglab/MMseqs2", - "avatar": "https://avatars.githubusercontent.com/u/7237671?v=4", - "description": "MMseqs2: ultra fast and sensitive search and clustering suite", + "uid": "github/Kaixhin/FGLab", + "url": "https://github.com/Kaixhin/FGLab", + "rel": "/software/repository/github/Kaixhin/FGLab", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Future Gadget Laboratory", "topics": [ - "bioinformatics", - "sequence-clustering", - "profile-search", - "sequence-search", - "linclust", - "mmseqs", - "metagenomics", - "alignment", - "blast", - "taxonomy" + "machine-learning", + "reproducible-research", + "reproducible-science" ] }, { - "uid": "github/nasa/KeplerPORTs", - "url": "https://github.com/nasa/KeplerPORTs", - "rel": "/software/repository/github/nasa/KeplerPORTs", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/nasa/Kamodo", - "url": "https://github.com/nasa/Kamodo", - "rel": "/software/repository/github/nasa/Kamodo", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/nasa/simupy-flight", - "url": "https://github.com/nasa/simupy-flight", - "rel": "/software/repository/github/nasa/simupy-flight", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": null, - "topics": [] + "uid": "github/Kaixhin/dockerfiles", + "url": "https://github.com/Kaixhin/dockerfiles", + "rel": "/software/repository/github/Kaixhin/dockerfiles", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Compilation of Dockerfiles with automated builds enabled on the Docker Registry", + "topics": [ + "docker", + "dockerfiles", + "machine-learning", + "cuda", + "vnc", + "deep-learning" + ] }, { - "uid": "github/nasa/kepler-robovetter", - "url": "https://github.com/nasa/kepler-robovetter", - "rel": "/software/repository/github/nasa/kepler-robovetter", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": null, - "topics": [] + "uid": "github/Kaixhin/spinning-up-basic", + "url": "https://github.com/Kaixhin/spinning-up-basic", + "rel": "/software/repository/github/Kaixhin/spinning-up-basic", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Basic versions of agents from Spinning Up in Deep RL written in PyTorch", + "topics": [ + "deep-learning", + "deep-reinforcement-learning" + ] }, { - "uid": "github/nasa/prog_models", - "url": "https://github.com/nasa/prog_models", - "rel": "/software/repository/github/nasa/prog_models", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": "The NASA Prognostic Model Package is a Python framework focused on defining and building models for prognostics (computation of remaining useful life) of engineering systems, and provides a set of prognostics models for select components developed within this framework, suitable for use in prognostics applications for these components.", - "topics": [ - "simulation", - "modeling", - "prognostics", - "prognostic-models", - "prognostics-health-management" + "uid": "github/Kaixhin/FGMachine", + "url": "https://github.com/Kaixhin/FGMachine", + "rel": "/software/repository/github/Kaixhin/FGMachine", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Future Gadget Machine", + "topics": [ + "machine-learning", + "reproducible-research", + "reproducible-science" ] }, { - "uid": "github/nasa/ncompare", - "url": "https://github.com/nasa/ncompare", - "rel": "/software/repository/github/nasa/ncompare", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": "Compare the structure of two netCDF files at the command line", + "uid": "github/Kaixhin/PlaNet", + "url": "https://github.com/Kaixhin/PlaNet", + "rel": "/software/repository/github/Kaixhin/PlaNet", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Deep Planning Network: Control from pixels by latent planning with learned dynamics", "topics": [ - "data-comparison", - "netcdf", - "hierarchical-data" + "deep-learning", + "deep-reinforcement-learning" ] }, { - "uid": "github/nasa/exoscene", - "url": "https://github.com/nasa/exoscene", - "rel": "/software/repository/github/nasa/exoscene", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": null, - "topics": [] + "uid": "github/Kaixhin/Autoencoders", + "url": "https://github.com/Kaixhin/Autoencoders", + "rel": "/software/repository/github/Kaixhin/Autoencoders", + "avatar": "https://avatars.githubusercontent.com/u/991891?v=4", + "description": "Torch implementations of various types of autoencoders", + "topics": [ + "autoencoder", + "deep-learning" + ] }, { - "uid": "github/nasa/K2CE", - "url": "https://github.com/nasa/K2CE", - "rel": "/software/repository/github/nasa/K2CE", - "avatar": "https://avatars.githubusercontent.com/u/848102?v=4", - "description": "Kepler K2 Cadence Events (K2CE) is a Python data visualization and manipulation tool for astronomers to identify and remove cadences (observations) associated with problematic thruster events, thus producing cleaner light curves. K2CE was designed to work with standard Kepler or K2 data products: long-cadence (30 min) and short-cadence (1 min) light curve files and long-cadence and short-cadence target pixel files. The tool has been modified to work with light curve files and target pixel files from the TESS mission.", - "topics": [] + "uid": "github/sylvainprigent/napari-tracks-reader", + "url": "https://github.com/sylvainprigent/napari-tracks-reader", + "rel": "/software/repository/github/sylvainprigent/napari-tracks-reader", + "avatar": "https://avatars.githubusercontent.com/u/9695951?v=4", + "description": "napari reader plugin for tracking", + "topics": [ + "napari-plugin" + ] }, { - "uid": "github/cwentland0/perform", - "url": "https://github.com/cwentland0/perform", - "rel": "/software/repository/github/cwentland0/perform", - "avatar": "https://avatars.githubusercontent.com/u/33126235?v=4", - "description": "One-dimensional unsteady compressible reacting flow simulation framework, designed for simple prototyping and testing of novel reduced-order model methods.", + "uid": "github/SevgiAkten/pycellga", + "url": "https://github.com/SevgiAkten/pycellga", + "rel": "/software/repository/github/SevgiAkten/pycellga", + "avatar": "https://avatars.githubusercontent.com/u/43684746?v=4", + "description": "Cellular Genetic Algorithms in Python.", "topics": [ - "reduced-order-modeling", - "reacting-flow-simulations" + "cga", + "ieee-754", + "optimization", + "python", + "cellulargeneticalgorithm", + "machinecodedoperators" ] }, { - "uid": "github/thomasorb/orcs", - "url": "https://github.com/thomasorb/orcs", - "rel": "/software/repository/github/thomasorb/orcs", - "avatar": "https://avatars.githubusercontent.com/u/30360191?v=4", - "description": "ORCS is an analysis engine for SITELLE spectral cubes.", - "topics": [] + "uid": "github/metagentools/gbintk", + "url": "https://github.com/metagentools/gbintk", + "rel": "/software/repository/github/metagentools/gbintk", + "avatar": "https://avatars.githubusercontent.com/u/105288780?v=4", + "description": "\ud83c\udf1f\ud83e\uddec GraphBin-Tk: assembly graph-based metagenomic binning toolkit", + "topics": [ + "contigs", + "metagenomics", + "metagenomic-binning", + "assembly-graph", + "bioinformatics" + ] }, { - "uid": "github/thomasorb/orbs", - "url": "https://github.com/thomasorb/orbs", - "rel": "/software/repository/github/thomasorb/orbs", - "avatar": "https://avatars.githubusercontent.com/u/30360191?v=4", - "description": "ORBS is the data reduction pipeline for SITELLE", - "topics": [] + "uid": "github/freesurfer/freesurfer", + "url": "https://github.com/freesurfer/freesurfer", + "rel": "/software/repository/github/freesurfer/freesurfer", + "avatar": "https://avatars.githubusercontent.com/u/6330653?v=4", + "description": "Neuroimaging analysis and visualization suite", + "topics": [ + "freesurfer", + "neuroimaging", + "mri", + "lcn" + ] }, { - "uid": "github/aberer/RogueNaRok", - "url": "https://github.com/aberer/RogueNaRok", - "rel": "/software/repository/github/aberer/RogueNaRok", - "avatar": "https://avatars.githubusercontent.com/u/881002?v=4", - "description": "A versatile and scalable algorithm for rogue taxon identification. Also includes implementations of the maximum agreement subtree, leaf stability index and taxonomic instability index", + "uid": "github/metabolomicsworkbench/MetGENE", + "url": "https://github.com/metabolomicsworkbench/MetGENE", + "rel": "/software/repository/github/metabolomicsworkbench/MetGENE", + "avatar": "https://avatars.githubusercontent.com/u/55557713?v=4", + "description": "Gene-centric Metabolomics Information Retrieval Tool", "topics": [] }, { - "uid": "github/chanzuckerberg/idseq-dag", - "url": "https://github.com/chanzuckerberg/czid-dag", - "rel": "/software/repository/github/chanzuckerberg/idseq-dag", - "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", - "description": "Please see https://github.com/chanzuckerberg/czid-workflows for the latest version of CZ ID workflows.", + "uid": "github/martinvonk/SPEI", + "url": "https://github.com/martinvonk/SPEI", + "rel": "/software/repository/github/martinvonk/SPEI", + "avatar": "https://avatars.githubusercontent.com/u/66305055?v=4", + "description": "A Python package to calculate and visualize some popular drought indices such as the SPI, SPEI and SGI.", "topics": [ - "genomics", - "infectious-diseases", - "idseq" + "drought", + "groundwater", + "hydrology", + "python", + "sgi", + "spei", + "timeseries", + "spi", + "drought-index", + "drought-indices" ] }, { - "uid": "github/chanzuckerberg/shasta", - "url": "https://github.com/chanzuckerberg/shasta", - "rel": "/software/repository/github/chanzuckerberg/shasta", - "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", - "description": "De novo assembly from Oxford Nanopore reads.", - "topics": [ - "dna", - "sequencing", - "assembly", - "nanopore", - "pacbio", - "long-read", - "de-novo" - ] + "uid": "github/dnonatar/Sequoia", + "url": "https://github.com/dnonatar/Sequoia", + "rel": "/software/repository/github/dnonatar/Sequoia", + "avatar": "https://avatars.githubusercontent.com/u/19934223?v=4", + "description": null, + "topics": [] }, { - "uid": "github/chanzuckerberg/cellxgene", - "url": "https://github.com/chanzuckerberg/cellxgene", - "rel": "/software/repository/github/chanzuckerberg/cellxgene", - "avatar": "https://avatars.githubusercontent.com/u/19917299?v=4", - "description": "an interactive explorer for single-cell transcriptomics data", + "uid": "github/szhorvat/IGraphM", + "url": "https://github.com/szhorvat/IGraphM", + "rel": "/software/repository/github/szhorvat/IGraphM", + "avatar": "https://avatars.githubusercontent.com/u/1212871?v=4", + "description": "IGraph/M is the igraph interface for Mathematica", "topics": [ - "scientific", - "visualization", - "scrna-seq", - "transcriptomics", - "dataviz" + "igraph", + "mathematica", + "mathematics", + "network-graph", + "graph-theory", + "raspberry-pi", + "network-analysis", + "graph-algorithms", + "wolfram-language" ] }, { - "uid": "github/lamyj/odil", - "url": "https://github.com/lamyj/odil", - "rel": "/software/repository/github/lamyj/odil", - "avatar": "https://avatars.githubusercontent.com/u/4102070?v=4", - "description": "Odil is a C++11 library for the DICOM standard", - "topics": [ - "c-plus-plus", - "dicom", - "python", - "medical-imaging" - ] + "uid": "github/NGSolve/ngsPETSc", + "url": "https://github.com/NGSolve/ngsPETSc", + "rel": "/software/repository/github/NGSolve/ngsPETSc", + "avatar": "https://avatars.githubusercontent.com/u/30256916?v=4", + "description": "ngsPETSc Docs", + "topics": [] }, { - "uid": "github/CyclotronResearchCentre/bidsme", - "url": "https://github.com/CyclotronResearchCentre/bidsme", - "rel": "/software/repository/github/CyclotronResearchCentre/bidsme", - "avatar": "https://avatars.githubusercontent.com/u/2012195?v=4", - "description": "Flexible bidsificator for multimodal datasets", - "topics": [ - "bids", - "mri-data", - "dicom", - "nifti", - "eeg", - "brainvision" - ] + "uid": "github/dmvandamt/beyonce", + "url": "https://github.com/dmvandamt/beyonce", + "rel": "/software/repository/github/dmvandamt/beyonce", + "avatar": "https://avatars.githubusercontent.com/u/159004461?v=4", + "description": null, + "topics": [] }, { - "uid": "github/ccsosa/GOCompare", - "url": "https://github.com/ccsosa/GOCompare", - "rel": "/software/repository/github/ccsosa/GOCompare", - "avatar": "https://avatars.githubusercontent.com/u/10407841?v=4", - "description": "This is an R package designed to analyze functional enrichment results between two species (A list of genes and their orthologues)", + "uid": "github/Beryl-Jingxin/PyExoCross", + "url": "https://github.com/Beryl-Jingxin/PyExoCross", + "rel": "/software/repository/github/Beryl-Jingxin/PyExoCross", + "avatar": "https://avatars.githubusercontent.com/u/56116939?v=4", + "description": null, "topics": [] }, { - "uid": "github/nationalparkservice/NPSdataverse", - "url": "https://github.com/nationalparkservice/NPSdataverse", - "rel": "/software/repository/github/nationalparkservice/NPSdataverse", - "avatar": "https://avatars.githubusercontent.com/u/1126069?v=4", - "description": "Loads a suite of R packages for creating and manipulating data packages including interacting with DataStore.", + "uid": "github/nithyanandan/PRISim", + "url": "https://github.com/nithyanandan/PRISim", + "rel": "/software/repository/github/nithyanandan/PRISim", + "avatar": "https://avatars.githubusercontent.com/u/5192621?v=4", + "description": "Precision Radio Interferometry Simulator (for radio astronomy applications)", "topics": [ - "datastore", - "eml-metadata", - "metadata", - "national-parks", - "data-packages", - "r", - "r-package", - "ecological-metadata-language", - "eml", - "accessible", - "data-package", - "findable", - "interoperable", - "machine-readable", - "national-park-service", - "open-data", - "reuseable" + "python", + "radio-astronomy", + "radioastronomy", + "interferometry", + "simulations", + "power-spectrum", + "astronomy", + "cosmology" ] }, { - "uid": "github/schochastics/graphlayouts", - "url": "https://github.com/schochastics/graphlayouts", - "rel": "/software/repository/github/schochastics/graphlayouts", - "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", - "description": "new layout algorithms for network visualizations in R", + "uid": "github/ComtekAdvancedStructures/cmstatr", + "url": "https://github.com/ComtekAdvancedStructures/cmstatr", + "rel": "/software/repository/github/ComtekAdvancedStructures/cmstatr", + "avatar": "https://avatars3.githubusercontent.com/u/9559756?v=4", + "description": "An R Package for Statistical Analysis of Composite Material Data", "topics": [ - "ggraph", + "statistics", "r", - "graph-algorithms", - "network-analysis", - "network-visualization" + "data", + "materials-science" ] }, { - "uid": "github/schochastics/signnet", - "url": "https://github.com/schochastics/signnet", - "rel": "/software/repository/github/schochastics/signnet", - "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", - "description": "R package for signed networks", - "topics": [ - "sna", - "network-analysis", - "signed-networks" - ] + "uid": "github/cobilab/OptimJV3", + "url": "https://github.com/cobilab/OptimJV3", + "rel": "/software/repository/github/cobilab/OptimJV3", + "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", + "description": "Optimize compression parameters of Jarvis3", + "topics": [] }, { - "uid": "github/schochastics/netrankr", - "url": "https://github.com/schochastics/netrankr", - "rel": "/software/repository/github/schochastics/netrankr", - "avatar": "https://avatars.githubusercontent.com/u/17147355?v=4", - "description": "An R package for network centrality", + "uid": "github/cobilab/altair", + "url": "https://github.com/cobilab/altair", + "rel": "/software/repository/github/cobilab/altair", + "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", + "description": "AltaiR: a C toolkit for alignment-free and spatial-temporal analysis of multi-FASTA data", "topics": [ - "network-analysis", - "r-package", - "network-centrality" + "alignment-free", + "spatial-temportal", + "toolkit", + "data-analysis" ] }, { - "uid": "github/RichardMoot/LinearOne", - "url": "https://github.com/RichardMoot/LinearOne", - "rel": "/software/repository/github/RichardMoot/LinearOne", - "avatar": "https://avatars.githubusercontent.com/u/1473033?v=4", - "description": "LinearOne is a prototype theorem prover for first-order (multiplicative, intuitionistic) linear logic.", - "topics": [ - "linear-logic", - "first-order-logic", - "theorem-proving", - "proof-net", - "displacement-calculus-grammars", - "swi-prolog", - "logic-programming", - "latex" - ] + "uid": "github/cobilab/RFSC", + "url": "https://github.com/cobilab/RFSC", + "rel": "/software/repository/github/cobilab/RFSC", + "avatar": "https://avatars.githubusercontent.com/u/49339287?v=4", + "description": "Reference-Free Sequence Classification Tool for DNA sequences in metagenomic samples", + "topics": [] }, { - "uid": "github/RichardMoot/GrailLight", - "url": "https://github.com/RichardMoot/GrailLight", - "rel": "/software/repository/github/RichardMoot/GrailLight", - "avatar": "https://avatars.githubusercontent.com/u/1473033?v=4", - "description": "Light-weight chart parser for multimodal type-logical grammars", - "topics": [ - "parser", - "parsing", - "logical-grammars", - "logic-programming", - "chart-parser", - "categorial-grammar", - "natural-language-processing", - "natural-language-understanding" - ] + "uid": "github/tmcclintock/AReconstructionTool", + "url": "https://github.com/tmcclintock/AReconstructionTool", + "rel": "/software/repository/github/tmcclintock/AReconstructionTool", + "avatar": "https://avatars.githubusercontent.com/u/10226392?v=4", + "description": "ART: A Reconstruction Tool. For reconstructing probability distributions using Gaussian processes.", + "topics": [] }, { - "uid": "github/RWTH-EBC/AixWeather", - "url": "https://github.com/RWTH-EBC/AixWeather", - "rel": "/software/repository/github/RWTH-EBC/AixWeather", - "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", - "description": "A weather data generation tool for building energy system simulations. Pull, Transform, Export.", + "uid": "github/tmcclintock/cluster_toolkit", + "url": "https://github.com/tmcclintock/cluster_toolkit", + "rel": "/software/repository/github/tmcclintock/cluster_toolkit", + "avatar": "https://avatars.githubusercontent.com/u/10226392?v=4", + "description": "Tools for analyzing galaxy clusters.", "topics": [ - "dwd", - "epw", - "tmy3", - "try", - "weather", - "weatherdata", - "weatherdatacollection", - "converter" + "cosmology", + "galaxy-clusters", + "simulations", + "numerical-calculations" ] }, { - "uid": "github/RWTH-EBC/districtgenerator", - "url": "https://github.com/RWTH-EBC/districtgenerator", - "rel": "/software/repository/github/RWTH-EBC/districtgenerator", - "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", - "description": "Tool for demand profile generation in districts", - "topics": [ - "maintained", - "tool" - ] + "uid": "github/emunte/vaRHC", + "url": "https://github.com/emunte/vaRHC", + "rel": "/software/repository/github/emunte/vaRHC", + "avatar": "https://avatars.githubusercontent.com/u/49304354?v=4", + "description": null, + "topics": [] }, { - "uid": "github/RWTH-EBC/AixCaliBuHA", - "url": "https://github.com/RWTH-EBC/AixCaliBuHA", - "rel": "/software/repository/github/RWTH-EBC/AixCaliBuHA", - "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", - "description": "Wield this tool to be King Arthur of your models.", + "uid": "github/hrwakeford/ExoTiC-ISM", + "url": "https://github.com/hrwakeford/ExoTiC-ISM", + "rel": "/software/repository/github/hrwakeford/ExoTiC-ISM", + "avatar": "https://avatars3.githubusercontent.com/u/7988823?v=4", + "description": "This is a repository for the reduction pipeline detailed in Wakeford, et al., 2016, ApJ. The method implements marginalization across a series of models to represent stochastic models for observatory and instrument systematics. This is primarily for HST WFC3, however, may be extened to STIS in the future. ", "topics": [] }, { - "uid": "github/RWTH-EBC/FiLiP", - "url": "https://github.com/RWTH-EBC/FiLiP", - "rel": "/software/repository/github/RWTH-EBC/FiLiP", - "avatar": "https://avatars.githubusercontent.com/u/8121773?v=4", - "description": "FIWARE Library for Python (FiLiP) to work with FIWARE API", + "uid": "github/MAnalytics/akmedoids", + "url": "https://github.com/MAnalytics/akmedoids", + "rel": "/software/repository/github/MAnalytics/akmedoids", + "avatar": "https://avatars1.githubusercontent.com/u/27354347?v=4", + "description": "akmedoids for longitudinal clustering", + "topics": [] + }, + { + "uid": "github/MAnalytics/opitools", + "url": "https://github.com/MAnalytics/opitools", + "rel": "/software/repository/github/MAnalytics/opitools", + "avatar": "https://avatars.githubusercontent.com/u/27354347?v=4", + "description": "An R-package for opinion analysis of social media data", + "topics": [] + }, + { + "uid": "github/Materials-Consortia/OPTIMADE-Filter", + "url": "https://github.com/Materials-Consortia/OPTIMADE-Filter", + "rel": "/software/repository/github/Materials-Consortia/OPTIMADE-Filter", + "avatar": "https://avatars.githubusercontent.com/u/23107754?v=4", + "description": "OPTIMADE filter language parser in Perl", "topics": [ - "fiware", - "hacktoberfest", - "fiware-orion", - "fiware-iot-agents", - "fiware-ngsi-v2", - "python", - "iot", - "fiware-quantum-leap" + "perl5", + "optimade", + "parser" ] }, { - "uid": "github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", - "url": "https://github.com/rodoulak/desalsim", - "rel": "/software/repository/github/rodoulak/Desalination-and-Brine-Treatment-Simulation-", - "avatar": "https://avatars.githubusercontent.com/u/150446818?v=4", - "description": "Techno-economic models for desalination and brine treatment technologies", + "uid": "github/Materials-Consortia/optimade-python-tools", + "url": "https://github.com/Materials-Consortia/optimade-python-tools", + "rel": "/software/repository/github/Materials-Consortia/optimade-python-tools", + "avatar": "https://avatars.githubusercontent.com/u/23107754?v=4", + "description": "Tools for implementing and consuming OPTIMADE APIs in Python", "topics": [ - "brine", - "desalination", - "resource-recovery", - "techno-economic-analysis" + "optimade-specification", + "optimade-python", + "optimade-api", + "openapi", + "python" ] }, { - "uid": "github/LQYoLH/CnnCrispr", - "url": "https://github.com/LQYoLH/CnnCrispr", - "rel": "/software/repository/github/LQYoLH/CnnCrispr", - "avatar": "https://avatars.githubusercontent.com/u/58096958?v=4", - "description": "A deep learning method for sgRNA off-target propensity prediction.", + "uid": "github/matsen/pplacer", + "url": "https://github.com/matsen/pplacer", + "rel": "/software/repository/github/matsen/pplacer", + "avatar": "https://avatars.githubusercontent.com/u/112708?v=4", + "description": "Phylogenetic placement and downstream analysis", "topics": [] }, { - "uid": "github/sid-krish/Rhometa_Full_Genome", - "url": "https://github.com/sid-krish/Rhometa_Full_Genome", - "rel": "/software/repository/github/sid-krish/Rhometa_Full_Genome", - "avatar": "https://avatars.githubusercontent.com/u/56985355?v=4", - "description": null, + "uid": "github/inrae/RCaNmodel", + "url": "https://github.com/inrae/RCaNmodel", + "rel": "/software/repository/github/inrae/RCaNmodel", + "avatar": "https://avatars.githubusercontent.com/u/64418390?v=4", + "description": "repository for RCaN and RCaNconstructor", "topics": [] }, { - "uid": "github/cinemascience/cinema_snap", - "url": "https://github.com/cinemascience/cinema_snap", - "rel": "/software/repository/github/cinemascience/cinema_snap", - "avatar": "https://avatars.githubusercontent.com/u/36246440?v=4", - "description": "React-based web viewer", - "topics": [] + "uid": "github/kevin218/Eureka", + "url": "https://github.com/kevin218/Eureka", + "rel": "/software/repository/github/kevin218/Eureka", + "avatar": "https://avatars.githubusercontent.com/u/21340541?v=4", + "description": "Eureka! is a data reduction and analysis pipeline intended for time-series observations with the James Webb Space Telescope (JWST).", + "topics": [ + "jwst", + "exoplanets", + "python" + ] }, { - "uid": "github/hsci-r/finnish-media-scrapers", - "url": "https://github.com/hsci-r/finnish-media-scrapers", - "rel": "/software/repository/github/hsci-r/finnish-media-scrapers", - "avatar": "https://avatars.githubusercontent.com/u/58025542?v=4", - "description": "Scrapers for extracting articles from major Finnish journalistic media outlets", + "uid": "github/smaret/astrochem", + "url": "https://github.com/smaret/astrochem", + "rel": "/software/repository/github/smaret/astrochem", + "avatar": "https://avatars.githubusercontent.com/u/95471?v=4", + "description": "A code to compute the abundances of chemical species in the interstellar medium", "topics": [] }, { - "uid": "github/mrteetoe/HOI", - "url": "https://github.com/mrteetoe/HOI", - "rel": "/software/repository/github/mrteetoe/HOI", - "avatar": "https://avatars.githubusercontent.com/u/29948143?v=4", - "description": null, + "uid": "github/smaret/thindisk", + "url": "https://github.com/smaret/thindisk", + "rel": "/software/repository/github/smaret/thindisk", + "avatar": "https://avatars.githubusercontent.com/u/95471?v=4", + "description": "Compute the line emission from a geometrically thin protoplanetary disk", + "topics": [] + }, + { + "uid": "github/FAU-LAP/NOMAD-CAMELS", + "url": "https://github.com/FAU-LAP/NOMAD-CAMELS", + "rel": "/software/repository/github/FAU-LAP/NOMAD-CAMELS", + "avatar": "https://avatars.githubusercontent.com/u/60480039?v=4", + "description": "We are developing a configurable measurement software (CAMELS), targeted towards the requirements of experimental solid-state physics. Here many experiments utilize a multitude of measurement devices used in dynamically changing setups.", "topics": [] }, { - "uid": "github/kanaverse/kana", - "url": "https://github.com/kanaverse/kana", - "rel": "/software/repository/github/kanaverse/kana", - "avatar": "https://avatars.githubusercontent.com/u/125705984?v=4", - "description": "Single cell analysis in the browser", + "uid": "github/computational-metabolomics/dimspy", + "url": "https://github.com/computational-metabolomics/dimspy", + "rel": "/software/repository/github/computational-metabolomics/dimspy", + "avatar": "https://avatars.githubusercontent.com/u/20993922?v=4", + "description": "Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data", "topics": [ - "single-cell", - "interactive-visualizations", - "exploratory-data-analysis", - "webassembly", - "rna-seq", - "cite-seq", - "bioinformatics", - "interactive-analysis" + "metabolomics", + "mass-spectrometry", + "dims", + "untargeted-metabolomics", + "raw", + "mzml" ] }, { - "uid": "github/emsig/elfe3D", - "url": "https://github.com/emsig/elfe3D", - "rel": "/software/repository/github/emsig/elfe3D", - "avatar": "https://avatars.githubusercontent.com/u/27303180?v=4", - "description": "Modelling with the total electric field approach using finite elements in 3-D", + "uid": "github/computational-metabolomics/msnpy", + "url": "https://github.com/computational-metabolomics/msnpy", + "rel": "/software/repository/github/computational-metabolomics/msnpy", + "avatar": "https://avatars.githubusercontent.com/u/20993922?v=4", + "description": "Python package for processing and annotation of MSn fragmentation data", "topics": [] }, { - "uid": "github/pmelsted/pizzly", - "url": "https://github.com/pmelsted/pizzly", - "rel": "/software/repository/github/pmelsted/pizzly", - "avatar": "https://avatars.githubusercontent.com/u/1830628?v=4", - "description": "Fast fusion detection using kallisto", + "uid": "github/samb8s/PsrPopPy", + "url": "https://github.com/samb8s/PsrPopPy", + "rel": "/software/repository/github/samb8s/PsrPopPy", + "avatar": "https://avatars.githubusercontent.com/u/122250?v=4", + "description": "Python implementation of PSRPOP, designed to be run from the command line or from Python scripts/interpreter", "topics": [] }, { - "uid": "github/stermzsofi/TiDE", - "url": "https://github.com/stermzsofi/TiDE", - "rel": "/software/repository/github/stermzsofi/TiDE", - "avatar": "https://avatars.githubusercontent.com/u/70320987?v=4", - "description": null, + "uid": "github/21cmfast/21cmEMU", + "url": "https://github.com/21cmfast/21cmEMU", + "rel": "/software/repository/github/21cmfast/21cmEMU", + "avatar": "https://avatars.githubusercontent.com/u/51762336?v=4", + "description": "An emulator of 21cmFAST summaries.", "topics": [] }, { - "uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", - "url": "https://github.com/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", - "rel": "/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", - "avatar": "https://avatars.githubusercontent.com/u/9025444?v=4", - "description": "Repository supporting the original research paper in Nature Communications (Primakov et al. 2022)", + "uid": "github/STAR-Fusion/STAR-Fusion", + "url": "https://github.com/STAR-Fusion/STAR-Fusion", + "rel": "/software/repository/github/STAR-Fusion/STAR-Fusion", + "avatar": "https://avatars.githubusercontent.com/u/11923838?v=4", + "description": "STAR-Fusion codebase", "topics": [] }, { - "uid": "github/dragontaoran/sleev", - "url": "https://github.com/dragontaoran/sleev", - "rel": "/software/repository/github/dragontaoran/sleev", - "avatar": "https://avatars.githubusercontent.com/u/23112873?v=4", - "description": "Combination of logreg2ph and TwoPhaseReg", + "uid": "github/PASTAQ-MS/PASTAQ", + "url": "https://github.com/PASTAQ-MS/PASTAQ", + "rel": "/software/repository/github/PASTAQ-MS/PASTAQ", + "avatar": "https://avatars.githubusercontent.com/u/82393501?v=4", + "description": "Pipelines and Systems for Threshold Avoiding Quantification of LC-MS/MS data", "topics": [] }, { - "uid": "github/grimme-lab/xtb", - "url": "https://github.com/grimme-lab/xtb", - "rel": "/software/repository/github/grimme-lab/xtb", - "avatar": "https://avatars.githubusercontent.com/u/49521176?v=4", - "description": "Semiempirical Extended Tight-Binding Program Package", + "uid": "github/jdswinbank/Comet", + "url": "https://github.com/jdswinbank/Comet", + "rel": "/software/repository/github/jdswinbank/Comet", + "avatar": "https://avatars.githubusercontent.com/u/460854?v=4", + "description": "A complete VOEvent transport system", "topics": [ - "quantum-chemistry", - "tight-binding", - "computational-chemistry", - "atomistic-simulations", - "force-field" + "astronomy", + "voevent" ] }, { - "uid": "github/rhernandvel/ViromeXplore", - "url": "https://github.com/rhernandvel/ViromeXplore", - "rel": "/software/repository/github/rhernandvel/ViromeXplore", - "avatar": "https://avatars.githubusercontent.com/u/115227890?v=4", - "description": "Nextflow workflow for the analysis and discovery of viral sequences from metagenomes and viromes", + "uid": "github/LaRoccaRaphael/MSI_recalibration", + "url": "https://github.com/LaRoccaRaphael/MSI_recalibration", + "rel": "/software/repository/github/LaRoccaRaphael/MSI_recalibration", + "avatar": "https://avatars.githubusercontent.com/u/70296317?v=4", + "description": "Using Biological Signals for Mass Recalibration of Mass Spectrometry Imaging Data", "topics": [] }, { - "uid": "github/bbercovici/SBGAT", - "url": "https://github.com/bbercovici/SBGAT", - "rel": "/software/repository/github/bbercovici/SBGAT", - "avatar": "https://avatars.githubusercontent.com/u/7539935?v=4", - "description": "The implementation of the Small Bodies Geophysical Analysis Tool (SBGAT)", + "uid": "github/jollejolles/pirecorder", + "url": "https://github.com/JolleJolles/pirecorder", + "rel": "/software/repository/github/jollejolles/pirecorder", + "avatar": "https://avatars3.githubusercontent.com/u/8775649?v=4", + "description": "Controlled and automated image and video recording with the raspberry pi", "topics": [ - "shape-models", - "gravity-model", - "uncertainty-quantification" + "recording", + "raspberrypi", + "camera-calibration", + "rpi" ] }, { - "uid": "github/nadvornikjiri/HiSS-Cube", - "url": "https://github.com/nadvornikjiri/HiSS-Cube", - "rel": "/software/repository/github/nadvornikjiri/HiSS-Cube", - "avatar": "https://avatars.githubusercontent.com/u/3609910?v=4", - "description": "Software package for handling multi-dimensional multi-resolution data within Database.", + "uid": "github/smandal97/Sprout", + "url": "https://github.com/smandal97/Sprout", + "rel": "/software/repository/github/smandal97/Sprout", + "avatar": "https://avatars.githubusercontent.com/u/63262399?v=4", + "description": "Sprout is a finite volume hydro code based on the moving mesh approach. It uses a simple expanding Cartesian grid to track outflows for several orders of magnitudes in expansion.", "topics": [] }, { - "uid": "github/msm550/DMATIS", - "url": "https://github.com/msm550/DMATIS", - "rel": "/software/repository/github/msm550/DMATIS", - "avatar": "https://avatars.githubusercontent.com/u/12563057?v=4", - "description": "Dark Matter ATtenuation Importance Sampling", + "uid": "github/Ompha/CLUES", + "url": "https://github.com/Ompha/CLUES", + "rel": "/software/repository/github/Ompha/CLUES", + "avatar": "https://avatars.githubusercontent.com/u/12269235?v=4", + "description": "CLustering UnsupErvised with Sequencer: A fully interpretable clustering tool for analyzing spectral data ", "topics": [] }, { - "uid": "github/robynlm/sphereint", - "url": "https://github.com/robynlm/sphereint", - "rel": "/software/repository/github/robynlm/sphereint", - "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", - "description": "Code to integrate data on a grid within a sphere", - "topics": [] + "uid": "github/n-claes/legolas", + "url": "https://github.com/n-claes/legolas", + "rel": "/software/repository/github/n-claes/legolas", + "avatar": "https://avatars.githubusercontent.com/u/43474374?v=4", + "description": "Legolas: a modern tool for MHD spectroscopy", + "topics": [ + "magnetohydrodynamics", + "finite-elements", + "astrophysics", + "spectroscopy" + ] }, { - "uid": "github/robynlm/ICPertFLRW", - "url": "https://github.com/robynlm/ICPertFLRW", - "rel": "/software/repository/github/robynlm/ICPertFLRW", - "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", - "description": null, + "uid": "github/doriancazeneuve/ODNet", + "url": "https://github.com/doriancazeneuve/ODNet", + "rel": "/software/repository/github/doriancazeneuve/ODNet", + "avatar": "https://avatars.githubusercontent.com/u/112989778?v=4", + "description": "ODNet : Asteroid Occultation Detection Convolutional Neural Network", "topics": [] }, { - "uid": "github/robynlm/ebweyl", - "url": "https://github.com/robynlm/ebweyl", - "rel": "/software/repository/github/robynlm/ebweyl", - "avatar": "https://avatars.githubusercontent.com/u/111498435?v=4", - "description": null, + "uid": "github/maize-genetics/rTASSEL", + "url": "https://github.com/maize-genetics/rTASSEL", + "rel": "/software/repository/github/maize-genetics/rTASSEL", + "avatar": "https://avatars.githubusercontent.com/u/53280986?v=4", + "description": "R front-end for TASSEL", "topics": [] }, { - "uid": "github/JamesKirk11/Tiberius", - "url": "https://github.com/JamesKirk11/Tiberius", - "rel": "/software/repository/github/JamesKirk11/Tiberius", - "avatar": "https://avatars.githubusercontent.com/u/13677312?v=4", - "description": "The Tiberius pipeline to extract time-series spectra and fit exoplanet transit light curves.", - "topics": [] + "uid": "github/IndrajeetPatil/ggstatsplot", + "url": "https://github.com/IndrajeetPatil/ggstatsplot", + "rel": "/software/repository/github/IndrajeetPatil/ggstatsplot", + "avatar": "https://avatars.githubusercontent.com/u/11330453?v=4", + "description": "Enhancing `ggplot2` plots with statistical analysis \ud83d\udcca\ud83c\udfa8\ud83d\udce3", + "topics": [ + "ggplot-extension", + "statistical-tests", + "dataviz", + "r", + "statistical-analysis", + "visualization", + "datascience", + "violin-plot", + "plot", + "bayes-factors", + "regression-models", + "correlation", + "correlation-matrices", + "tidy-data", + "effect-size", + "mixed-models", + "robust-statistics", + "non-parametric-statistics", + "parametric", + "meta-analysis" + ] }, { - "uid": "github/SIOSlab/NEXO", - "url": "https://github.com/SIOSlab/NEXO", - "rel": "/software/repository/github/SIOSlab/NEXO", - "avatar": "https://avatars.githubusercontent.com/u/39835313?v=4", - "description": "Nonsingular Estimator for Exoplanet Orbits", + "uid": "github/IndrajeetPatil/statsExpressions", + "url": "https://github.com/IndrajeetPatil/statsExpressions", + "rel": "/software/repository/github/IndrajeetPatil/statsExpressions", + "avatar": "https://avatars.githubusercontent.com/u/11330453?v=4", + "description": "Expressions and dataframes with statistical details \ud83d\udcc9 \ud83d\udcdc\ud83d\udd23\u2705", + "topics": [ + "statistical-tests", + "statistical-details", + "meta-analysis", + "contingency-table", + "robust", + "correlation", + "parametric", + "bayesian-inference", + "bayesian-statistics", + "robust-statistics", + "effectsize", + "tidy" + ] + }, + { + "uid": "github/TingMAC/FrMLNet", + "url": "https://github.com/TingMAC/FrMLNet", + "rel": "/software/repository/github/TingMAC/FrMLNet", + "avatar": "https://avatars.githubusercontent.com/u/45377618?v=4", + "description": "This is a implementation of training code of this paper \u201cFrMLNet: Framelet-based Multi-level Network for Pansharpening\u201d", "topics": [] }, { - "uid": "github/SIOSlab/exodetbox", - "url": "https://github.com/SIOSlab/exodetbox", - "rel": "/software/repository/github/SIOSlab/exodetbox", - "avatar": "https://avatars.githubusercontent.com/u/39835313?v=4", - "description": "Methods for finding planets sharing a common (s,dmag)", + "uid": "github/TeHanHunter/TESS_Gaia_Light_Curve", + "url": "https://github.com/TeHanHunter/TESS_Gaia_Light_Curve", + "rel": "/software/repository/github/TeHanHunter/TESS_Gaia_Light_Curve", + "avatar": "https://avatars.githubusercontent.com/u/49893001?v=4", + "description": "TESS FFI light curves fitted with effective PSF and decontaminated with Gaia DR3", "topics": [] }, { - "uid": "github/lmcinnes/umap", - "url": "https://github.com/lmcinnes/umap", - "rel": "/software/repository/github/lmcinnes/umap", - "avatar": "https://avatars.githubusercontent.com/u/11962885?v=4", - "description": "Uniform Manifold Approximation and Projection", - "topics": [ - "umap", - "dimensionality-reduction", - "visualization", - "machine-learning", - "topological-data-analysis" - ] + "uid": "github/neherlab/nextalign", + "url": "https://github.com/neherlab/nextalign", + "rel": "/software/repository/github/neherlab/nextalign", + "avatar": "https://avatars.githubusercontent.com/u/8996580?v=4", + "description": "\ud83e\uddec Viral genome reference alignment", + "topics": [] }, { - "uid": "github/rordenlab/dcm2niix", - "url": "https://github.com/rordenlab/dcm2niix", - "rel": "/software/repository/github/rordenlab/dcm2niix", - "avatar": "https://avatars.githubusercontent.com/u/22748159?v=4", - "description": "is a designed to convert neuroimaging data from the DICOM format to the NIfTI format.", + "uid": "github/grimme-lab/xtb", + "url": "https://github.com/grimme-lab/xtb", + "rel": "/software/repository/github/grimme-lab/xtb", + "avatar": "https://avatars.githubusercontent.com/u/49521176?v=4", + "description": "Semiempirical Extended Tight-Binding Program Package", "topics": [ - "dicom", - "nifti", - "mri", - "mri-images", - "research", - "neuroscience", - "neuroimaging", - "jpeg-image", - "jpeg", - "dicom-images", - "dcm", - "nii", - "gz", - "nitrc", - "dcm2niix", - "mricrogl", - "bids-format", - "nifti-format" + "quantum-chemistry", + "tight-binding", + "computational-chemistry", + "atomistic-simulations", + "force-field" ] }, { - "uid": "github/mommermi/photometrypipeline", - "url": "https://github.com/mommermi/photometrypipeline", - "rel": "/software/repository/github/mommermi/photometrypipeline", - "avatar": "https://avatars.githubusercontent.com/u/16566333?v=4", - "description": "automated photometry pipeline for small to medium-sized observatories", - "topics": [ - "astronomy", - "astronomical-images", - "pipeline", - "data-analysis", - "photometry", - "astrometry" - ] + "uid": "github/ruggiero/galstep", + "url": "https://github.com/ruggiero/galstep", + "rel": "/software/repository/github/ruggiero/galstep", + "avatar": "https://avatars.githubusercontent.com/u/4472476?v=4", + "description": "Generates initial conditions for a spiral galaxy simulation in a format that can be read in GADGET2 or RAMSES, or alternatively in the HDF5 format.", + "topics": [] }, { - "uid": "github/pyBRAvo/pyBRAvo", - "url": "https://github.com/pyBRAvo/pyBRAvo", - "rel": "/software/repository/github/pyBRAvo/pyBRAvo", - "avatar": "https://avatars3.githubusercontent.com/u/71509894?v=4", - "description": null, + "uid": "github/ruggiero/clustep", + "url": "https://github.com/ruggiero/clustep", + "rel": "/software/repository/github/ruggiero/clustep", + "avatar": "https://avatars.githubusercontent.com/u/4472476?v=4", + "description": "Generates initial conditions for a galaxy cluster halo simulation in a format that can be read in GADGET2 or RAMSES.", "topics": [] }, { - "uid": "github/kinleyid/tempodisco", - "url": "https://github.com/kinleyid/tempodisco", - "rel": "/software/repository/github/kinleyid/tempodisco", - "avatar": "https://avatars.githubusercontent.com/u/18541620?v=4", - "description": "An R package for temporal discounting", + "uid": "github/mcfrith/tandem-genotypes", + "url": "https://github.com/mcfrith/tandem-genotypes", + "rel": "/software/repository/github/mcfrith/tandem-genotypes", + "avatar": "https://avatars.githubusercontent.com/u/17116542?v=4", + "description": "compare lengths of duplications in DNA sequences", "topics": [] }, { - "uid": "github/MBoemo/DNAscent", - "url": "https://github.com/MBoemo/DNAscent", - "rel": "/software/repository/github/MBoemo/DNAscent", - "avatar": "https://avatars.githubusercontent.com/u/3235705?v=4", - "description": "Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.", + "uid": "github/mcfrith/dnarrange", + "url": "https://github.com/mcfrith/dnarrange", + "rel": "/software/repository/github/mcfrith/dnarrange", + "avatar": "https://avatars.githubusercontent.com/u/17116542?v=4", + "description": "Method to find rearrangements in long DNA reads relative to a genome seq", "topics": [] }, { - "uid": "github/fenderglass/Ragout", - "url": "https://github.com/fenderglass/Ragout", - "rel": "/software/repository/github/fenderglass/Ragout", - "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", - "description": "Chromosome-level scaffolding using multiple references", + "uid": "github/haotianteng/BoostNano", + "url": "https://github.com/haotianteng/BoostNano", + "rel": "/software/repository/github/haotianteng/BoostNano", + "avatar": "https://avatars.githubusercontent.com/u/11155295?v=4", + "description": "A segmentation toolkit for segment the Nanopore RNA signal.", "topics": [] }, { - "uid": "github/fenderglass/Flye", - "url": "https://github.com/fenderglass/Flye", - "rel": "/software/repository/github/fenderglass/Flye", - "avatar": "https://avatars.githubusercontent.com/u/2475380?v=4", - "description": "De novo assembler for single molecule sequencing reads using repeat graphs", + "uid": "github/hungyipu/Odyssey", + "url": "https://github.com/hungyipu/Odyssey", + "rel": "/software/repository/github/hungyipu/Odyssey", + "avatar": "https://avatars.githubusercontent.com/u/14836746?v=4", + "description": "Odyssey: a public, GPU-based GRRT (general relativistic radiative transfer) code", "topics": [] }, { - "uid": "github/philbull/RadioFisher", - "url": "https://github.com/philbull/RadioFisher", - "rel": "/software/repository/github/philbull/RadioFisher", - "avatar": "https://avatars.githubusercontent.com/u/710867?v=4", - "description": "Fisher forecasting for 21cm intensity mapping and spectroscopic galaxy surveys", + "uid": "github/meganmansfield/IGRINS_transit", + "url": "https://github.com/meganmansfield/IGRINS_transit", + "rel": "/software/repository/github/meganmansfield/IGRINS_transit", + "avatar": "https://avatars.githubusercontent.com/u/32969116?v=4", + "description": "Data reduction pipeline for high-resolution transiting exoplanet observations with the IGRINS spectrograph on Gemini-S", "topics": [] }, { - "uid": "github/javicarron/pynkowski", - "url": "https://github.com/javicarron/pynkowski", - "rel": "/software/repository/github/javicarron/pynkowski", - "avatar": "https://avatars.githubusercontent.com/u/25009611?v=4", - "description": "Pynkowski is a Python package to compute Minkowski Functionals, as well as their expected values for different fields.", + "uid": "github/zqfang/gseapy", + "url": "https://github.com/zqfang/GSEApy", + "rel": "/software/repository/github/zqfang/gseapy", + "avatar": "https://avatars.githubusercontent.com/u/5889336?v=4", + "description": "Gene Set Enrichment Analysis in Python", "topics": [ - "cmb", - "gaussian", - "healpix", - "healpy", - "minkowski", - "non-gaussian", - "polarization", - "spherical", - "topology", - "cosmology", - "maps", - "curvature", - "anisotropy", - "minkowski-functionals", - "non-gaussianities", - "python" + "gsea", + "enrichment-analysis", + "python3", + "rust" ] }, { - "uid": "github/javicarron/mtneedlet", - "url": "https://github.com/javicarron/mtneedlet", - "rel": "/software/repository/github/javicarron/mtneedlet", - "avatar": "https://avatars.githubusercontent.com/u/25009611?v=4", - "description": "This is a Python Package aimed at the use of needlets to filter spherical maps, detecting the maxima within the maps and analysing them using a multiple testing approach.", + "uid": "github/astro-friedel/CADRE", + "url": "https://github.com/astro-friedel/CADRE", + "rel": "/software/repository/github/astro-friedel/CADRE", + "avatar": "https://avatars.githubusercontent.com/u/3028041?v=4", + "description": "CARMA Data Reduction Pipeline", "topics": [] }, { - "uid": "github/karlotness/adrt", - "url": "https://github.com/karlotness/adrt", - "rel": "/software/repository/github/karlotness/adrt", - "avatar": "https://avatars.githubusercontent.com/u/8847665?v=4", - "description": "Fast approximate discrete Radon transform for NumPy arrays", + "uid": "github/cog-imperial/GPdoemd", + "url": "https://github.com/cog-imperial/GPdoemd", + "rel": "/software/repository/github/cog-imperial/GPdoemd", + "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", + "description": "Design of experiments for model discrimination using Gaussian process surrogate models", "topics": [] }, { - "uid": "github/silx-kit/pyFAI", - "url": "https://github.com/silx-kit/pyFAI", - "rel": "/software/repository/github/silx-kit/pyFAI", - "avatar": "https://avatars.githubusercontent.com/u/14869885?v=4", - "description": "Fast Azimuthal Integration in Python", + "uid": "github/cog-imperial/suspect", + "url": "https://github.com/cog-imperial/suspect", + "rel": "/software/repository/github/cog-imperial/suspect", + "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", + "description": "Special Structure Detection for Pyomo", "topics": [ - "python", - "diffraction", - "science" + "mathematical-programming", + "mixed-integer-optimization", + "nonlinear-optimization", + "pyomo" ] }, { - "uid": "github/rust-bio/rust-bio-tools", - "url": "https://github.com/rust-bio/rust-bio-tools", - "rel": "/software/repository/github/rust-bio/rust-bio-tools", - "avatar": "https://avatars.githubusercontent.com/u/13785584?v=4", - "description": "A set of command line utilities based on Rust-Bio.", + "uid": "github/cog-imperial/entmoot", + "url": "https://github.com/cog-imperial/entmoot", + "rel": "/software/repository/github/cog-imperial/entmoot", + "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", + "description": null, "topics": [] }, { - "uid": "github/davidebolo1993/TRiCoLOR", - "url": "https://github.com/davidebolo1993/TRiCoLOR", - "rel": "/software/repository/github/davidebolo1993/TRiCoLOR", - "avatar": "https://avatars3.githubusercontent.com/u/39052119?v=4", - "description": "Tadem Repeats Caller for LOng Reads", + "uid": "github/cog-imperial/galini", + "url": "https://github.com/cog-imperial/galini", + "rel": "/software/repository/github/cog-imperial/galini", + "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", + "description": "An extensible MINLP solver", "topics": [] }, { - "uid": "github/davidebolo1993/VISOR", - "url": "https://github.com/davidebolo1993/VISOR", - "rel": "/software/repository/github/davidebolo1993/VISOR", - "avatar": "https://avatars3.githubusercontent.com/u/39052119?v=4", - "description": "VarIant SimulatOR for short, long and linked reads", + "uid": "github/annagraff/densify", + "url": "https://github.com/annagraff/densify", + "rel": "/software/repository/github/annagraff/densify", + "avatar": "https://avatars.githubusercontent.com/u/42563257?v=4", + "description": null, "topics": [] }, { - "uid": "github/GWang2022/iGDP", - "url": "https://github.com/GWang2022/iGDP", - "rel": "/software/repository/github/GWang2022/iGDP", - "avatar": "https://avatars.githubusercontent.com/u/107245708?v=4", - "description": "An integrated Genome Decontamination Pipeline for wild ciliated microeukaryotes", - "topics": [ - "genomics", - "bioinformatics" - ] + "uid": "github/lanl/PyBNF", + "url": "https://github.com/lanl/PyBNF", + "rel": "/software/repository/github/lanl/PyBNF", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuristic optimization algorithms, and an adaptive Markov chain Monte Carlo (MCMC) sampling algorithm.", + "topics": [] + }, + { + "uid": "github/lanl/CosmicEmu", + "url": "https://github.com/lanl/CosmicEmu", + "rel": "/software/repository/github/lanl/CosmicEmu", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Fast predictions for the matter power spectrum.", + "topics": [] + }, + { + "uid": "github/lanl/swiftbat_python", + "url": "https://github.com/lanl/swiftbat_python", + "rel": "/software/repository/github/lanl/swiftbat_python", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Utilities for BAT instrument on the Neil Gehrels Swift Observatory satellite", + "topics": [] }, { - "uid": "github/MannLabs/alphapept", - "url": "https://github.com/MannLabs/alphapept", - "rel": "/software/repository/github/MannLabs/alphapept", - "avatar": "https://avatars.githubusercontent.com/u/46714192?v=4", - "description": "A modular, python-based framework for mass spectrometry. Powered by nbdev.", - "topics": [ - "mass-spectrometry", - "bioinformatics", - "proteomics" - ] + "uid": "github/lanl/spiner", + "url": "https://github.com/lanl/spiner", + "rel": "/software/repository/github/lanl/spiner", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Performance portable routines for generic, tabulated, multi-dimensional data", + "topics": [] }, { - "uid": "github/chrishales/pieflag", - "url": "https://github.com/chrishales/pieflag", - "rel": "/software/repository/github/chrishales/pieflag", - "avatar": "https://avatars.githubusercontent.com/u/8146490?v=4", - "description": "CASA task to flag bad data by drawing upon statistics from reference channels in bandpass-calibrated data", + "uid": "github/lanl/singularity-eos", + "url": "https://github.com/lanl/singularity-eos", + "rel": "/software/repository/github/lanl/singularity-eos", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Performance portable equations of state and mixed cell closures", "topics": [] }, { - "uid": "github/aidenlab/juicer", - "url": "https://github.com/aidenlab/juicer", - "rel": "/software/repository/github/aidenlab/juicer", - "avatar": "https://avatars.githubusercontent.com/u/2790252?v=4", - "description": "A One-Click System for Analyzing Loop-Resolution Hi-C Experiments", - "topics": [ - "3d-genome", - "3d-genome-browser", - "genomics", - "hi-c", - "bioinformatics", - "ngs" - ] + "uid": "github/lanl/GLUE", + "url": "https://github.com/lanl/GLUE", + "rel": "/software/repository/github/lanl/GLUE", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Generic Learning User Enablement Code", + "topics": [] }, { - "uid": "github/Yida-Lin/libxdf", - "url": "https://github.com/xdf-modules/libxdf", - "rel": "/software/repository/github/Yida-Lin/libxdf", - "avatar": "https://avatars.githubusercontent.com/u/49031462?v=4", - "description": "C++ library for loading XDF files", + "uid": "github/lanl/scico", + "url": "https://github.com/lanl/scico", + "rel": "/software/repository/github/lanl/scico", + "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", + "description": "Scientific Computational Imaging COde", "topics": [ - "xdf", - "sigviewer" + "computational-imaging", + "inverse-problems", + "optimization", + "admm", + "fista", + "total-variation", + "plug-and-play-priors", + "jax", + "convex-optimization", + "proximal-algorithms", + "proximal-operators" ] }, { - "uid": "github/ChenYangyao/hipp", - "url": "https://github.com/ChenYangyao/hipp", - "rel": "/software/repository/github/ChenYangyao/hipp", - "avatar": "https://avatars.githubusercontent.com/u/17449213?v=4", - "description": "HIPP: Modern C++ Toolkit for HPC", - "topics": [ - "hpc", - "mpi", - "hdf5", - "simd" - ] + "uid": "github/beagle-dev/beagle-lib", + "url": "https://github.com/beagle-dev/beagle-lib", + "rel": "/software/repository/github/beagle-dev/beagle-lib", + "avatar": "https://avatars.githubusercontent.com/u/780253?v=4", + "description": "general purpose library for evaluating the likelihood of sequence evolution on trees", + "topics": [] }, { - "uid": "github/tripathi/Atmospheric-Athena", - "url": "https://github.com/tripathi/Atmospheric-Athena", - "rel": "/software/repository/github/tripathi/Atmospheric-Athena", - "avatar": "https://avatars.githubusercontent.com/u/1373620?v=4", - "description": "3D Atmospheric escape model with ionizing radiative transfer", + "uid": "github/bbye98/mdcraft", + "url": "https://github.com/bbye98/mdcraft", + "rel": "/software/repository/github/bbye98/mdcraft", + "avatar": "https://avatars.githubusercontent.com/u/43505873?v=4", + "description": "A Python assistant for performing and analyzing molecular dynamics simulations of soft matter systems", "topics": [] }, { - "uid": "github/CFSAN-Biostatistics/SeroTools", - "url": "https://github.com/CFSAN-Biostatistics/SeroTools", - "rel": "/software/repository/github/CFSAN-Biostatistics/SeroTools", - "avatar": "https://avatars2.githubusercontent.com/u/7605009?v=4", - "description": "A toolkit and repository for the White-Kauffmann-Le Minor scheme for Salmonella serotyping.", - "topics": [] + "uid": "github/everval/LongMemory.jl", + "url": "https://github.com/everval/LongMemory.jl", + "rel": "/software/repository/github/everval/LongMemory.jl", + "avatar": "https://avatars.githubusercontent.com/u/26837739?v=4", + "description": "Julia package to generate, estimate, and forecast long memory processes", + "topics": [ + "arfima", + "fractional-differencing", + "har-model", + "long-memory", + "long-range-dependence", + "time-series", + "time-series-analysis", + "cross-sectional-aggregation", + "stochastic-duration-shock", + "strong-persistence", + "forecasting" + ] }, { - "uid": "github/qtltools/qtltools", - "url": "https://github.com/qtltools/qtltools", - "rel": "/software/repository/github/qtltools/qtltools", - "avatar": "https://avatars.githubusercontent.com/u/20395337?v=4", - "description": "A complete tool set for molecular QTL discovery and analysis", + "uid": "github/villano-lab/nrCascadeSim", + "url": "https://github.com/villano-lab/nrCascadeSim", + "rel": "/software/repository/github/villano-lab/nrCascadeSim", + "avatar": "https://avatars.githubusercontent.com/u/52713476?v=4", + "description": "calculating the NR spectrum resulting from neutron-capture cascades.", "topics": [] }, { - "uid": "github/guilledufort/EMVC-2", - "url": "https://github.com/guilledufort/EMVC-2", - "rel": "/software/repository/github/guilledufort/EMVC-2", - "avatar": "https://avatars.githubusercontent.com/u/60487627?v=4", - "description": "An efficient SNV variant caller based on the expectation maximization algorithm. EMVC-2 is implemented in C and uses a python wrapper.", + "uid": "github/zhangyk8/sconce-scms", + "url": "https://github.com/zhangyk8/sconce-scms", + "rel": "/software/repository/github/zhangyk8/sconce-scms", + "avatar": "https://avatars.githubusercontent.com/u/30488853?v=4", + "description": "Spherical and Conic Cosmic Web Finders with Extended SCMS Algorithms", "topics": [] }, { - "uid": "github/guilledufort/EnanoFASTQ", - "url": "https://github.com/guilledufort/EnanoFASTQ", - "rel": "/software/repository/github/guilledufort/EnanoFASTQ", - "avatar": "https://avatars.githubusercontent.com/u/60487627?v=4", - "description": "A FASTQ lossless compression algorithm especially designed for nanopore sequencing FASTQ files.", + "uid": "github/mgalardini/pyseer", + "url": "https://github.com/mgalardini/pyseer", + "rel": "/software/repository/github/mgalardini/pyseer", + "avatar": "https://avatars.githubusercontent.com/u/1125215?v=4", + "description": "SEER, reimplemented in python \ud83d\udc0d\ud83d\udd2e", "topics": [ - "nanopore-fastq-files", - "data-compression", - "bioinformatics", - "information-theory" + "gwas", + "bacteria", + "k-mer", + "reimplementation", + "reproducible-science" ] }, { - "uid": "github/kim8517/RVSNUpy", - "url": "https://github.com/kim8517/RVSNUpy", - "rel": "/software/repository/github/kim8517/RVSNUpy", - "avatar": "https://avatars.githubusercontent.com/u/96759588?v=4", - "description": null, - "topics": [] + "uid": "github/citation-file-format/cff-converter-python", + "url": "https://github.com/citation-file-format/cff-converter-python", + "rel": "/software/repository/github/citation-file-format/cff-converter-python", + "avatar": "https://avatars2.githubusercontent.com/u/32704278?v=4", + "description": "Command line utility to read CITATION.cff file from a GitHub url or local file and convert it to BibTex and other formats.", + "topics": [ + "citation", + "citation-files", + "attribution", + "software-sustainability", + "bibtex", + "endnote", + "ris", + "cff" + ] }, { - "uid": "github/Bonfanti88/MCMCI", - "url": "https://github.com/Bonfanti88/MCMCI", - "rel": "/software/repository/github/Bonfanti88/MCMCI", - "avatar": "https://avatars.githubusercontent.com/u/22291413?v=4", - "description": "A code to fully characterise an exoplanetary system (Bonfanti & Gillon, 2020)", - "topics": [] + "uid": "github/citation-file-format/cff-initializer-javascript", + "url": "https://github.com/citation-file-format/cff-initializer-javascript", + "rel": "/software/repository/github/citation-file-format/cff-initializer-javascript", + "avatar": "https://avatars2.githubusercontent.com/u/32704278?v=4", + "description": "Web form to initialize CITATION.cff files.", + "topics": [ + "credit", + "research-software-engineering", + "citation" + ] }, { - "uid": "github/flu-crew/smot", - "url": "https://github.com/flu-crew/smot", - "rel": "/software/repository/github/flu-crew/smot", - "avatar": "https://avatars.githubusercontent.com/u/48957009?v=4", - "description": "Simple Manipulation Of Trees", - "topics": [] + "uid": "github/citation-file-format/cffconvert-github-action", + "url": "https://github.com/citation-file-format/cffconvert-github-action", + "rel": "/software/repository/github/citation-file-format/cffconvert-github-action", + "avatar": "https://avatars.githubusercontent.com/u/32704278?v=4", + "description": "GitHub action to validate CITATION.cff files, and convert to other citation formats.", + "topics": [ + "actions", + "cff", + "zenodo-citation-metadata", + "github-actions", + "action", + "continuous-integration", + "github-action", + "citation", + "citation-file-format" + ] }, { - "uid": "github/jdswinbank/Comet", - "url": "https://github.com/jdswinbank/Comet", - "rel": "/software/repository/github/jdswinbank/Comet", - "avatar": "https://avatars.githubusercontent.com/u/460854?v=4", - "description": "A complete VOEvent transport system", + "uid": "github/citation-file-format/citation-file-format", + "url": "https://github.com/citation-file-format/citation-file-format", + "rel": "/software/repository/github/citation-file-format/citation-file-format", + "avatar": "https://avatars.githubusercontent.com/u/32704278?v=4", + "description": "The Citation File Format lets you provide citation metadata for software or datasets in plaintext files that are easy to read by both humans and machines.", "topics": [ - "astronomy", - "voevent" + "citation", + "citation-files", + "credit", + "attribution", + "research-software-engineering", + "software-sustainability", + "wssspe", + "format" ] }, { - "uid": "github/jdhenshaw/SCOUSE", - "url": "https://github.com/jdhenshaw/SCOUSE", - "rel": "/software/repository/github/jdhenshaw/SCOUSE", - "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", - "description": "Semi-automated multi-COmponent Universal Spectral-line fitting Engine", + "uid": "github/DessimozLab/read2tree", + "url": "https://github.com/DessimozLab/read2tree", + "rel": "/software/repository/github/DessimozLab/read2tree", + "avatar": "https://avatars.githubusercontent.com/u/16049503?v=4", + "description": "a tool for inferring species tree from sequencing reads", "topics": [] }, { - "uid": "github/jdhenshaw/scousepy", - "url": "https://github.com/jdhenshaw/scousepy", - "rel": "/software/repository/github/jdhenshaw/scousepy", - "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", - "description": "ScousePy", + "uid": "github/DessimozLab/omamer", + "url": "https://github.com/DessimozLab/omamer", + "rel": "/software/repository/github/DessimozLab/omamer", + "avatar": "https://avatars.githubusercontent.com/u/16049503?v=4", + "description": "OMAmer - tree-driven and alignment-free protein assignment to sub-families", "topics": [] }, { - "uid": "github/jdhenshaw/acorns", - "url": "https://github.com/jdhenshaw/acorns", - "rel": "/software/repository/github/jdhenshaw/acorns", - "avatar": "https://avatars.githubusercontent.com/u/11787340?v=4", - "description": "Agglomerative Clustering for ORganising Nested Structures", + "uid": "github/rpetit3/fastq-scan", + "url": "https://github.com/rpetit3/fastq-scan", + "rel": "/software/repository/github/rpetit3/fastq-scan", + "avatar": "https://avatars.githubusercontent.com/u/5334269?v=4", + "description": "Output FASTQ summary statistics in JSON format", "topics": [] }, { - "uid": "github/MorgansLab/OSCILOS_Long", - "url": "https://github.com/MorgansLab/OSCILOS_long", - "rel": "/software/repository/github/MorgansLab/OSCILOS_Long", - "avatar": "https://avatars.githubusercontent.com/u/9108767?v=4", - "description": "OSCILOS_long is an open source code for simulating combustion instabilities. OSCILOS_lite was developed at Imperial College London by Prof. Aimee S. Morgans and co-workers. The code is open source and written in MATLAB.", + "uid": "github/rpetit3/fastq-dl", + "url": "https://github.com/rpetit3/fastq-dl", + "rel": "/software/repository/github/rpetit3/fastq-dl", + "avatar": "https://avatars.githubusercontent.com/u/5334269?v=4", + "description": "Download FASTQ files from SRA or ENA repositories.", "topics": [] }, { - "uid": "github/mengaldo/PySPOD", - "url": "https://github.com/mengaldo/PySPOD", - "rel": "/software/repository/github/mengaldo/PySPOD", - "avatar": "https://avatars.githubusercontent.com/u/8100801?v=4", - "description": "A Python package for spectral proper orthogonal decomposition (SPOD). ", - "topics": [ - "spod", - "dynamical-systems", - "data-mining", - "coherent-structures" - ] - }, - { - "uid": "github/nh13/DWGSIM", - "url": "https://github.com/nh13/DWGSIM", - "rel": "/software/repository/github/nh13/DWGSIM", - "avatar": "https://avatars.githubusercontent.com/u/846274?v=4", - "description": "a whole genome simulator for next-generation sequencing based off of wgsim found in SAMtools, which was written by Heng Li, and forked from DNAA. It was modified to handle ABI SOLiD and Ion Torrent data, as well as various assumptions about aligners and positions of indels. Many new features have been subsequently added.", + "uid": "github/gbernstein/gbdes", + "url": "https://github.com/gbernstein/gbdes", + "rel": "/software/repository/github/gbernstein/gbdes", + "avatar": "https://avatars.githubusercontent.com/u/1461152?v=4", + "description": "Gary's DES instrumental signature removal / fitting programs", "topics": [] }, { - "uid": "github/atomneb/AtomNeb-py", - "url": "https://github.com/atomneb/AtomNeb-py", - "rel": "/software/repository/github/atomneb/AtomNeb-py", - "avatar": "https://avatars2.githubusercontent.com/u/23319970?v=4", - "description": "AtomNeb - Python Package for Atomic Data of Ionized Nebulae", - "topics": [ - "atomneb", - "chianti-atomic-database", - "atomic-datasets", - "recombination-lines", - "collisionally-excited-lines", - "recombination-coefficients" - ] + "uid": "github/gbernstein/pixmappy", + "url": "https://github.com/gbernstein/pixmappy", + "rel": "/software/repository/github/gbernstein/pixmappy", + "avatar": "https://avatars.githubusercontent.com/u/1461152?v=4", + "description": "Python interface to gbdes pixel map (astrometry) solutions", + "topics": [] }, { - "uid": "github/Simthembile/cosmo-pipeline", - "url": "https://github.com/Simthembile/cosmo-pipeline", - "rel": "/software/repository/github/Simthembile/cosmo-pipeline", - "avatar": "https://avatars.githubusercontent.com/u/20681273?v=4", - "description": null, + "uid": "github/freelawproject/eyecite", + "url": "https://github.com/freelawproject/eyecite", + "rel": "/software/repository/github/freelawproject/eyecite", + "avatar": "https://avatars.githubusercontent.com/u/6012898?v=4", + "description": "Find legal citations in any block of text", "topics": [] }, { - "uid": "github/marcelauliano/MitoHiFi", - "url": "https://github.com/marcelauliano/MitoHiFi", - "rel": "/software/repository/github/marcelauliano/MitoHiFi", - "avatar": "https://avatars.githubusercontent.com/u/4116164?v=4", - "description": "Find, circularise and annotate mitogenome from PacBio assemblies", + "uid": "github/GabrielNakamura/FishPhyloMaker", + "url": "https://github.com/GabrielNakamura/FishPhyloMaker", + "rel": "/software/repository/github/GabrielNakamura/FishPhyloMaker", + "avatar": "https://avatars.githubusercontent.com/u/13869477?v=4", + "description": "Making phylogenies for a list of fish species ", "topics": [] }, { - "uid": "github/yuliadm/mixComp", - "url": "https://github.com/yuliadm/mixComp", - "rel": "/software/repository/github/yuliadm/mixComp", - "avatar": "https://avatars.githubusercontent.com/u/103601311?v=4", + "uid": "github/LeandroOrdonez/explora-vr-dash-client", + "url": "https://github.com/LeandroOrdonez/explora-vr-dash-client", + "rel": "/software/repository/github/LeandroOrdonez/explora-vr-dash-client", + "avatar": "https://avatars.githubusercontent.com/u/4668102?v=4", "description": null, "topics": [] }, { - "uid": "github/AllenInstitute/bmtk", - "url": "https://github.com/AllenInstitute/bmtk", - "rel": "/software/repository/github/AllenInstitute/bmtk", - "avatar": "https://avatars.githubusercontent.com/u/1848392?v=4", - "description": "Brain Modeling Toolkit", - "topics": [ - "neuroscience", - "modeling", - "simulation", - "python", - "neural-networks", - "neuroinformatics", - "neuron" - ] - }, - { - "uid": "github/tcallister/autoregressive-bbh-inference", - "url": "https://github.com/tcallister/autoregressive-bbh-inference", - "rel": "/software/repository/github/tcallister/autoregressive-bbh-inference", - "avatar": "https://avatars.githubusercontent.com/u/11800515?v=4", - "description": "This repository holds code and data release products behind the paper \"A parameter-free tour of the binary black hole population\"", + "uid": "github/scikit-tda/DREiMac", + "url": "https://github.com/scikit-tda/DREiMac", + "rel": "/software/repository/github/scikit-tda/DREiMac", + "avatar": "https://avatars.githubusercontent.com/u/41389769?v=4", + "description": "Dimensionality Reduction with Eilenberg-MacLane Coordinates", "topics": [] }, { - "uid": "github/hposborn/MonoTools", - "url": "https://github.com/hposborn/MonoTools", - "rel": "/software/repository/github/hposborn/MonoTools", - "avatar": "https://avatars.githubusercontent.com/u/13677414?v=4", - "description": "A package for detecting, vetting, and modelling transiting exoplanets on uncertain periods", - "topics": [ - "transits", - "lightcurve", - "planets", - "exoplanet", - "duo-transits" - ] - }, - { - "uid": "github/RainthunderWYL/LoRD", - "url": "https://github.com/RainthunderWYL/LoRD", - "rel": "/software/repository/github/RainthunderWYL/LoRD", - "avatar": "https://avatars.githubusercontent.com/u/30300990?v=4", - "description": "Locate Reconnection Distribution", + "uid": "github/ArtificialStellarPopulations/ArtPop", + "url": "https://github.com/ArtificialStellarPopulations/ArtPop", + "rel": "/software/repository/github/ArtificialStellarPopulations/ArtPop", + "avatar": "https://avatars.githubusercontent.com/u/71847255?v=4", + "description": "Building artificial galaxies one star at a time. ", "topics": [] }, { - "uid": "github/ryokbys/nap", - "url": "https://github.com/ryokbys/nap", - "rel": "/software/repository/github/ryokbys/nap", - "avatar": "https://avatars.githubusercontent.com/u/6027630?v=4", - "description": "Nagoya Atomistic-simulation Package (NAP). Why don't you take a NAP? ;)", + "uid": "github/GeoArkadeep/Stresslog", + "url": "https://github.com/GeoArkadeep/Stresslog", + "rel": "/software/repository/github/GeoArkadeep/Stresslog", + "avatar": "https://avatars.githubusercontent.com/u/160126374?v=4", + "description": "Python package to read well logs and model geomechanical properties.", "topics": [ - "molecular-dynamics", - "neural-network", - "atomistic-simulations" + "cross-platform", + "geomechanics", + "las-files", + "pore-pressure-prediction", + "well-logs", + "dlis" ] }, { - "uid": "github/su2code/SU2", - "url": "https://github.com/su2code/SU2", - "rel": "/software/repository/github/su2code/SU2", - "avatar": "https://avatars.githubusercontent.com/u/4796189?v=4", - "description": "SU2: An Open-Source Suite for Multiphysics Simulation and Design", - "topics": [ - "cfd", - "c-plus-plus", - "simulation", - "optimization", - "python", - "opensource", - "physics", - "flow", - "fluid", - "fluid-dynamics", - "hpc" - ] + "uid": "github/solerjuan/astroHOG", + "url": "https://github.com/solerjuan/astroHOG", + "rel": "/software/repository/github/solerjuan/astroHOG", + "avatar": "https://avatars.githubusercontent.com/u/10508683?v=4", + "description": "Set of tools for the analysis correlations using the Histograms of Oriented Gradients", + "topics": [] }, { - "uid": "github/RitchieLab/hudson", - "url": "https://github.com/RitchieLab/hudson", - "rel": "/software/repository/github/RitchieLab/hudson", - "avatar": "https://avatars.githubusercontent.com/u/28302846?v=4", - "description": "An R package for creating mirrored Manhattan plots", + "uid": "github/solerjuan/magnetar", + "url": "https://github.com/solerjuan/magnetar", + "rel": "/software/repository/github/solerjuan/magnetar", + "avatar": "https://avatars.githubusercontent.com/u/10508683?v=4", + "description": null, "topics": [] }, { - "uid": "github/ConnorDonegan/geostan", - "url": "https://github.com/ConnorDonegan/geostan", - "rel": "/software/repository/github/ConnorDonegan/geostan", - "avatar": "https://avatars.githubusercontent.com/u/24845033?v=4", - "description": "Bayesian spatial analysis", - "topics": [ - "stan", - "bayesian", - "spatial", - "epidemiology", - "public-health", - "r-package", - "bayesian-inference", - "rspatial", - "r", - "modeling", - "rstats", - "bayesian-statistics" - ] + "uid": "github/xuequan818/MatrixFuns.jl", + "url": "https://github.com/xuequan818/MatrixFuns.jl", + "rel": "/software/repository/github/xuequan818/MatrixFuns.jl", + "avatar": "https://avatars.githubusercontent.com/u/56442655?v=4", + "description": "Matrix functions in Julia", + "topics": [] }, { - "uid": "github/epigenelabs/inmoose", - "url": "https://github.com/epigenelabs/inmoose", - "rel": "/software/repository/github/epigenelabs/inmoose", - "avatar": "https://avatars.githubusercontent.com/u/43795319?v=4", - "description": "InMoose is the INtegrated Multi Omic Open Source Environment. It is a collection of tools for the analysis of omic data.", + "uid": "github/esilver01/small-lens-forecast-sims", + "url": "https://github.com/esilver01/small-lens-forecast-sims", + "rel": "/software/repository/github/esilver01/small-lens-forecast-sims", + "avatar": "https://avatars.githubusercontent.com/u/70253762?v=4", + "description": null, "topics": [] }, { - "uid": "github/neherlab/nextalign", - "url": "https://github.com/neherlab/nextalign", - "rel": "/software/repository/github/neherlab/nextalign", - "avatar": "https://avatars.githubusercontent.com/u/8996580?v=4", - "description": "\ud83e\uddec Viral genome reference alignment", + "uid": "github/esilver01/resnet-model-training", + "url": "https://github.com/esilver01/resnet-model-training", + "rel": "/software/repository/github/esilver01/resnet-model-training", + "avatar": "https://avatars.githubusercontent.com/u/70253762?v=4", + "description": null, "topics": [] }, { - "uid": "github/fumi-github/omicwas", - "url": "https://github.com/fumi-github/omicwas", - "rel": "/software/repository/github/fumi-github/omicwas", - "avatar": "https://avatars.githubusercontent.com/u/724031?v=4", - "description": "Cell-Type-Specific Disease Association Testing in Bulk Omics Experiments", + "uid": "github/korcsmarosgroup/TFlink", + "url": "https://github.com/korcsmarosgroup/TFlink", + "rel": "/software/repository/github/korcsmarosgroup/TFlink", + "avatar": "https://avatars.githubusercontent.com/u/54137652?v=4", + "description": "Repository for the TFlink.net website.", "topics": [] }, { - "uid": "github/brsynth/rp2paths", - "url": "https://github.com/brsynth/rp2paths", - "rel": "/software/repository/github/brsynth/rp2paths", - "avatar": "https://avatars.githubusercontent.com/u/33053548?v=4", - "description": "RetroPath2.0 to pathways", + "uid": "github/korcsmarosgroup/CytokineLink", + "url": "https://github.com/korcsmarosgroup/CytokineLink", + "rel": "/software/repository/github/korcsmarosgroup/CytokineLink", + "avatar": "https://avatars.githubusercontent.com/u/54137652?v=4", + "description": "CytokineLink: a map of cytokine communication for inflammatory and infectious diseases", "topics": [] }, { - "uid": "github/jdber1/opendrop", - "url": "https://github.com/jdber1/opendrop", - "rel": "/software/repository/github/jdber1/opendrop", - "avatar": "https://avatars.githubusercontent.com/u/12245642?v=4", - "description": "OpenDrop pendant drop tensiometry software", + "uid": "github/shadden/celmech", + "url": "https://github.com/shadden/celmech", + "rel": "/software/repository/github/shadden/celmech", + "avatar": "https://avatars.githubusercontent.com/u/1007148?v=4", + "description": "Sandbox for celestial mechanics calculations", "topics": [] }, { - "uid": "github/ModellingWebLab/chaste-codegen", - "url": "https://github.com/ModellingWebLab/chaste-codegen", - "rel": "/software/repository/github/ModellingWebLab/chaste-codegen", - "avatar": "https://avatars.githubusercontent.com/u/29707434?v=4", - "description": "Code generation for Chaste based on cellmlmanip", + "uid": "github/NeamulKabir/EnsembleFam", + "url": "https://github.com/NeamulKabir/EnsembleFam", + "rel": "/software/repository/github/NeamulKabir/EnsembleFam", + "avatar": "https://avatars.githubusercontent.com/u/9514340?v=4", + "description": "EnsembleFam: Towards a more accurate protein function prediction in twilight zone", "topics": [] }, { - "uid": "github/sap218/jabberwocky", - "url": "https://github.com/sap218/jabberwocky", - "rel": "/software/repository/github/sap218/jabberwocky", - "avatar": "https://avatars1.githubusercontent.com/u/15181526?v=4", - "description": "toolkit for those nonsensical ontologies", + "uid": "github/carpyncho/carpyncho-py", + "url": "https://github.com/carpyncho/carpyncho-py", + "rel": "/software/repository/github/carpyncho/carpyncho-py", + "avatar": "https://avatars.githubusercontent.com/u/13108515?v=4", + "description": "Carpyncho client for python", "topics": [ - "ontology", - "python", - "python3", - "text", - "tfidf", - "extraction", - "json", - "jabberwocky" + "vvv", + "astronomy", + "catalog", + "lightcurves" ] }, { - "uid": "github/franciscozorrilla/metaGEM", - "url": "https://github.com/franciscozorrilla/metaGEM", - "rel": "/software/repository/github/franciscozorrilla/metaGEM", - "avatar": "https://avatars.githubusercontent.com/u/35606471?v=4", - "description": ":gem: An easy-to-use workflow for generating context specific genome-scale metabolic models and predicting metabolic interactions within microbial communities directly from metagenomic data", + "uid": "github/ShixiangWang/sigminer", + "url": "https://github.com/ShixiangWang/sigminer", + "rel": "/software/repository/github/ShixiangWang/sigminer", + "avatar": "https://avatars1.githubusercontent.com/u/25057508?v=4", + "description": "\ud83c\udf32 An easy-to-use and scalable toolkit for genomic alteration (mutational) signature analysis and visualization in R", "topics": [ - "metagenomics", - "computational-biology", - "metabolic-models", - "gut-microbiome", - "snakemake", - "metagenome-assembled-genomes", - "mags", - "metabolism", + "mutational-signatures", + "copynumber-signatures", + "somatic-variants", + "somatic-mutations", + "cosmic-signatures", + "signature-extraction", + "nmf", + "nmf-extraction", + "bayesian-nmf", "bioinformatics", - "flux-balance-analysis", - "genome-scale-metabolic-model", - "metabolic-modeling", - "microbial-ecology", - "microbiome", - "systems-biology" + "r", + "cancer-research", + "visualization", + "sbs", + "dbs", + "indel", + "cnv", + "easy-to-use" ] }, { - "uid": "github/DHortaD/Lux", - "url": "https://github.com/DHortaD/Lux", - "rel": "/software/repository/github/DHortaD/Lux", - "avatar": "https://avatars.githubusercontent.com/u/45667330?v=4", - "description": null, + "uid": "github/jmason86/James-s-EVE-Dimming-Index-JEDI", + "url": "https://github.com/jmason86/James-s-EVE-Dimming-Index-JEDI", + "rel": "/software/repository/github/jmason86/James-s-EVE-Dimming-Index-JEDI", + "avatar": "https://avatars.githubusercontent.com/u/947614?v=4", + "description": "Detect and characterize coronal dimming in the Solar Dynamics Observatory Extreme Ultraviolet Variability Experiment data", + "topics": [ + "solar-physics", + "machine-learning", + "space-weather", + "data-science", + "data-analysis" + ] + }, + { + "uid": "github/ESMValGroup/ESMValCore", + "url": "https://github.com/ESMValGroup/ESMValCore", + "rel": "/software/repository/github/ESMValGroup/ESMValCore", + "avatar": "https://avatars1.githubusercontent.com/u/24584460?v=4", + "description": "ESMValTool Core: core functionalities for the ESMValTool", "topics": [] }, { - "uid": "github/conda/conda-package-handling", - "url": "https://github.com/conda/conda-package-handling", - "rel": "/software/repository/github/conda/conda-package-handling", - "avatar": "https://avatars.githubusercontent.com/u/6392739?v=4", - "description": "Create and extract conda packages of various formats", + "uid": "github/ESMValGroup/ESMValTool", + "url": "https://github.com/ESMValGroup/ESMValTool", + "rel": "/software/repository/github/ESMValGroup/ESMValTool", + "avatar": "https://avatars1.githubusercontent.com/u/24584460?v=4", + "description": "ESMValTool: A community diagnostic and performance metrics tool for routine evaluation of Earth system models in CMIP ", "topics": [] }, { - "uid": "github/conda/pycosat", - "url": "https://github.com/conda/pycosat", - "rel": "/software/repository/github/conda/pycosat", - "avatar": "https://avatars.githubusercontent.com/u/6392739?v=4", - "description": "Python bindings to picosat (a SAT solver)", + "uid": "github/MBoemo/DNAscent", + "url": "https://github.com/MBoemo/DNAscent", + "rel": "/software/repository/github/MBoemo/DNAscent", + "avatar": "https://avatars.githubusercontent.com/u/3235705?v=4", + "description": "Software for detecting regions of BrdU and EdU incorporation in Oxford Nanopore reads.", "topics": [] }, { - "uid": "github/conda/conda", - "url": "https://github.com/conda/conda", - "rel": "/software/repository/github/conda/conda", - "avatar": "https://avatars0.githubusercontent.com/u/6392739?v=4", - "description": "OS-agnostic, system-level binary package manager and ecosystem", - "topics": [ - "conda", - "package-management" - ] + "uid": "github/smith-chem-wisc/ProteaseGuru", + "url": "https://github.com/smith-chem-wisc/ProteaseGuru", + "rel": "/software/repository/github/smith-chem-wisc/ProteaseGuru", + "avatar": "https://avatars.githubusercontent.com/u/15989786?v=4", + "description": null, + "topics": [] }, { - "uid": "github/Alcampopiano/hypothesize", - "url": "https://github.com/Alcampopiano/hypothesize", - "rel": "/software/repository/github/Alcampopiano/hypothesize", - "avatar": "https://avatars1.githubusercontent.com/u/4624246?v=4", - "description": "Robust statistics in Python", + "uid": "github/smith-chem-wisc/MetaMorpheus", + "url": "https://github.com/smith-chem-wisc/MetaMorpheus", + "rel": "/software/repository/github/smith-chem-wisc/MetaMorpheus", + "avatar": "https://avatars.githubusercontent.com/u/15989786?v=4", + "description": "Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities", "topics": [ - "statistics", - "robust-statistics", - "python", - "r", - "hypothesis-testing", - "data-analysis", - "stats", - "null-hypothesis", - "confidence-intervals", - "significance-testing" + "ptm", + "database-search", + "proteome", + "uniprot", + "mass-match", + "spectra", + "calibration", + "proteomics-database-search", + "discovery" ] }, { - "uid": "github/adcameron/ffancy", - "url": "https://github.com/adcameron/ffancy", - "rel": "/software/repository/github/adcameron/ffancy", - "avatar": "https://avatars.githubusercontent.com/u/13779543?v=4", - "description": "Software package for testing of the Fast Folding Algorithm (FFA)", + "uid": "github/waynebhayes/SpArcFiRe", + "url": "https://github.com/waynebhayes/SpArcFiRe", + "rel": "/software/repository/github/waynebhayes/SpArcFiRe", + "avatar": "https://avatars.githubusercontent.com/u/20259980?v=4", + "description": "SPiral ARC FInder and REporter - find spiral arcs in galaxies.... or maybe hurricanes too?", "topics": [] }, { - "uid": "github/LBNL-ETA/MSWH", - "url": "https://github.com/LBNL-ETA/MSWH", - "rel": "/software/repository/github/LBNL-ETA/MSWH", - "avatar": "https://avatars1.githubusercontent.com/u/14825882?v=4", - "description": "Multiscale Solar Water Heating", + "uid": "github/lyalpha/pympc", + "url": "https://github.com/Lyalpha/pympc", + "rel": "/software/repository/github/lyalpha/pympc", + "avatar": "https://avatars.githubusercontent.com/u/12103194?v=4", + "description": "minor planet checking", "topics": [] }, { - "uid": "github/tramarobin/fctSPM", - "url": "https://github.com/tramarobin/fctSnPM", - "rel": "/software/repository/github/tramarobin/fctSPM", - "avatar": "https://avatars.githubusercontent.com/u/56997117?v=4", - "description": "Using spm1d package (v.0.4.3), compute anova and post-hoc tests from anova1 to anova3rm, with a non-parametric approach (permutation tests)", + "uid": "github/yanrong-stacy-song/creditr", + "url": "https://github.com/yanrong-stacy-song/creditr", + "rel": "/software/repository/github/yanrong-stacy-song/creditr", + "avatar": "https://avatars.githubusercontent.com/u/48292717?v=4", + "description": null, "topics": [] }, { - "uid": "github/tidymodels/stacks", - "url": "https://github.com/tidymodels/stacks", - "rel": "/software/repository/github/tidymodels/stacks", - "avatar": "https://avatars.githubusercontent.com/u/29100987?v=4", - "description": "An R package for tidy stacked ensemble modeling", + "uid": "github/gumilevskij/Framework", + "url": "https://github.com/gumilevskij/Framework", + "rel": "/software/repository/github/gumilevskij/Framework", + "avatar": "https://avatars.githubusercontent.com/u/195054977?v=4", + "description": "Python Framework for DSGE Modeling", "topics": [] }, { - "uid": "github/tidymodels/infer", - "url": "https://github.com/tidymodels/infer", - "rel": "/software/repository/github/tidymodels/infer", - "avatar": "https://avatars.githubusercontent.com/u/29100987?v=4", - "description": "An R package for tidyverse-friendly statistical inference", - "topics": [] + "uid": "github/xuanxu/starmatrix", + "url": "https://github.com/xuanxu/starmatrix", + "rel": "/software/repository/github/xuanxu/starmatrix", + "avatar": "https://avatars.githubusercontent.com/u/6528?v=4", + "description": "Modelling nucleosynthesis of galactic chemical elements", + "topics": [ + "astrophysics", + "galaxies" + ] }, { - "uid": "github/sirocco-rt/sirocco", - "url": "https://github.com/sirocco-rt/sirocco", - "rel": "/software/repository/github/sirocco-rt/sirocco", - "avatar": "https://avatars.githubusercontent.com/u/3064657?v=4", - "description": "This is the repository for Sirocco, the radiative transfer code used to model winds in AGN and other systems", + "uid": "github/madysonb/EVA", + "url": "https://github.com/madysonb/EVA", + "rel": "/software/repository/github/madysonb/EVA", + "avatar": "https://avatars.githubusercontent.com/u/54335494?v=4", + "description": "Calculate group age using Gaia excess uncertainties", "topics": [] }, { - "uid": "github/dtcc-platform/dtcc-builder", - "url": "https://github.com/dtcc-platform/dtcc-builder", - "rel": "/software/repository/github/dtcc-platform/dtcc-builder", - "avatar": "https://avatars.githubusercontent.com/u/125552939?v=4", - "description": null, + "uid": "github/jtksai/PyCOOL", + "url": "https://github.com/jtksai/PyCOOL", + "rel": "/software/repository/github/jtksai/PyCOOL", + "avatar": "https://avatars.githubusercontent.com/u/793635?v=4", + "description": "A fast object-oriented Python program that uses symplectic algorithms and GPU(s) to simulate scalar fields in the early universe", "topics": [] }, { - "uid": "github/kpenev/poet", - "url": "https://github.com/kpenev/poet", - "rel": "/software/repository/github/kpenev/poet", - "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", - "description": "Documentation at:", - "topics": [] + "uid": "github/will-rowe/groot", + "url": "https://github.com/will-rowe/groot", + "rel": "/software/repository/github/will-rowe/groot", + "avatar": "https://avatars.githubusercontent.com/u/5321233?v=4", + "description": "A resistome profiler for Graphing Resistance Out Of meTagenomes", + "topics": [ + "antibiotic-resistance", + "metagenomics", + "resistome", + "minhash", + "lsh", + "alignment" + ] }, { - "uid": "github/kpenev/AstroWISP", - "url": "https://github.com/kpenev/AstroWISP", - "rel": "/software/repository/github/kpenev/AstroWISP", - "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", - "description": null, - "topics": [] + "uid": "github/will-rowe/hulk", + "url": "https://github.com/will-rowe/hulk", + "rel": "/software/repository/github/will-rowe/hulk", + "avatar": "https://avatars.githubusercontent.com/u/5321233?v=4", + "description": "Histosketching Using Little Kmers", + "topics": [ + "sketching", + "hashing", + "genomics", + "microbiome" + ] }, { - "uid": "github/kpenev/AutoWISP", - "url": "https://github.com/kpenev/AutoWISP", - "rel": "/software/repository/github/kpenev/AutoWISP", - "avatar": "https://avatars.githubusercontent.com/u/7349174?v=4", - "description": null, + "uid": "github/tkchafin/autostreamtree", + "url": "https://github.com/tkchafin/autostreamtree", + "rel": "/software/repository/github/tkchafin/autostreamtree", + "avatar": "https://avatars.githubusercontent.com/u/10889979?v=4", + "description": "Stream trees for SNP datasets", "topics": [] }, { - "uid": "github/fogellab/multiWGCNA", - "url": "https://github.com/fogellab/multiWGCNA", - "rel": "/software/repository/github/fogellab/multiWGCNA", - "avatar": "https://avatars.githubusercontent.com/u/117482572?v=4", - "description": "an R package for deep mining gene co-expression networks in multi-trait expression data", + "uid": "github/alexandercoulter/fastfrechet", + "url": "https://github.com/alexandercoulter/fastfrechet", + "rel": "/software/repository/github/alexandercoulter/fastfrechet", + "avatar": "https://avatars.githubusercontent.com/u/67101356?v=4", + "description": null, "topics": [] }, { - "uid": "github/ExeClim/Isca", - "url": "https://github.com/ExeClim/Isca", - "rel": "/software/repository/github/ExeClim/Isca", - "avatar": "https://avatars.githubusercontent.com/u/13350658?v=4", - "description": "Idealized GCM from the University of Exeter", - "topics": [ - "planetary-atmospheres", - "atmospheric-science", - "atmospheric-modelling", - "geophysical-fluid-dynamics", - "climate-model" - ] + "uid": "github/ptriska/WavesDash", + "url": "https://github.com/ptriska/WavesDash", + "rel": "/software/repository/github/ptriska/WavesDash", + "avatar": "https://avatars.githubusercontent.com/u/45852775?v=4", + "description": "A web application for visualization of wastewater sequencing results", + "topics": [] }, { - "uid": "github/ethicsai/ethical-smart-grid", - "url": "https://github.com/ethicsai/ethical-smart-grid", - "rel": "/software/repository/github/ethicsai/ethical-smart-grid", - "avatar": "https://avatars.githubusercontent.com/u/113445198?v=4", - "description": "Reinforcement learning environment for learning ethical behaviours in a SmartGrid use-case.", + "uid": "github/BiaPyX/BiaPy", + "url": "https://github.com/BiaPyX/BiaPy", + "rel": "/software/repository/github/BiaPyX/BiaPy", + "avatar": "https://avatars.githubusercontent.com/u/156199480?v=4", + "description": "Open source Python library for building bioimage analysis pipelines", "topics": [ - "ai-ethics", - "artificial-intelligence", - "gym-environment", - "machine-ethics", + "computer-vision", + "deep-learning", + "biomedical-image-processing", + "segmentation", + "convolutional-neural-networks", + "image-segmentation", + "medical-imaging", + "semantic-segmentation", + "classification", + "instance-segmentation", + "object-detection", + "image-processing", + "machine-learning", + "denoising", + "self-supervised-learning", + "super-resolution", "python", - "reinforcement-learning", - "smart-grid" + "pytorch" ] }, { - "uid": "github/kpicteam/kpic_pipeline", - "url": "https://github.com/kpicteam/kpic_pipeline", - "rel": "/software/repository/github/kpicteam/kpic_pipeline", - "avatar": "https://avatars.githubusercontent.com/u/53029575?v=4", - "description": "KPIC Data Reduction Pipeline", - "topics": [] - }, - { - "uid": "github/ZhantianXu/PISAD", - "url": "https://github.com/ZhantianXu/PISAD", - "rel": "/software/repository/github/ZhantianXu/PISAD", - "avatar": "https://avatars.githubusercontent.com/u/125952645?v=4", - "description": "PISAD: reference-free intraspecies sample anomalies detetion tool based on k-mer counting ", + "uid": "github/NarlikarLab/exoDIVERSITY", + "url": "https://github.com/NarlikarLab/exoDIVERSITY", + "rel": "/software/repository/github/NarlikarLab/exoDIVERSITY", + "avatar": "https://avatars.githubusercontent.com/u/14049800?v=4", + "description": null, "topics": [] }, { - "uid": "github/braindatalab/PyBispectra", - "url": "https://github.com/braindatalab/PyBispectra", - "rel": "/software/repository/github/braindatalab/PyBispectra", - "avatar": "https://avatars.githubusercontent.com/u/65342931?v=4", - "description": "A Python signal analysis toolbox for computing spectral-domain interactions using the bispectrum.", + "uid": "github/odelaneau/shapeit5", + "url": "https://github.com/odelaneau/shapeit5", + "rel": "/software/repository/github/odelaneau/shapeit5", + "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", + "description": "Segmented HAPlotype Estimation and Imputation Tool", "topics": [ - "connectivity", - "neuroscience", - "python", - "signal-processing", - "spectral-analysis", - "bicoherence", - "bispectrum", - "cross-frequency-coupling", - "phase-amplitude-coupling", - "time-delay-estimation", - "amplitude-amplitude-coupling", - "phase-phase-coupling", - "waveform", - "waveshape", - "non-sinusoidal", - "ssd", - "hpmax", - "spatiospectral" + "bioinformatics", + "haplotype", + "phasing", + "sequencing" ] }, { - "uid": "github/ESMValGroup/ESMValCore", - "url": "https://github.com/ESMValGroup/ESMValCore", - "rel": "/software/repository/github/ESMValGroup/ESMValCore", - "avatar": "https://avatars1.githubusercontent.com/u/24584460?v=4", - "description": "ESMValTool Core: core functionalities for the ESMValTool", + "uid": "github/odelaneau/shapeit4", + "url": "https://github.com/odelaneau/shapeit4", + "rel": "/software/repository/github/odelaneau/shapeit4", + "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", + "description": "Segmented HAPlotype Estimation and Imputation Tool", "topics": [] }, { - "uid": "github/ESMValGroup/ESMValTool", - "url": "https://github.com/ESMValGroup/ESMValTool", - "rel": "/software/repository/github/ESMValGroup/ESMValTool", - "avatar": "https://avatars1.githubusercontent.com/u/24584460?v=4", - "description": "ESMValTool: A community diagnostic and performance metrics tool for routine evaluation of Earth system models in CMIP ", + "uid": "github/odelaneau/GLIMPSE", + "url": "https://github.com/odelaneau/GLIMPSE", + "rel": "/software/repository/github/odelaneau/GLIMPSE", + "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", + "description": "Low Coverage Calling of Genotypes", "topics": [] }, { - "uid": "github/c-white/blacklight", - "url": "https://github.com/c-white/blacklight", - "rel": "/software/repository/github/c-white/blacklight", - "avatar": "https://avatars.githubusercontent.com/u/2496675?v=4", - "description": "GR ray tracing code for post-processing Athena++ simulations", + "uid": "github/WGLab/LongGF", + "url": "https://github.com/WGLab/LongGF", + "rel": "/software/repository/github/WGLab/LongGF", + "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", + "description": "A computational algorithm and software tool for fast and accurate detection of gene fusion by long-read transcriptome sequencing", "topics": [] }, { - "uid": "github/LondonBiofoundry/basicsynbio", - "url": "https://github.com/LondonBiofoundry/basicsynbio", - "rel": "/software/repository/github/LondonBiofoundry/basicsynbio", - "avatar": "https://avatars.githubusercontent.com/u/61753978?v=4", - "description": "An open-source Python package to facilitate BASIC DNA Assembly workflows", + "uid": "github/WGLab/PhenoGPT2", + "url": "https://github.com/WGLab/PhenoGPT2", + "rel": "/software/repository/github/WGLab/PhenoGPT2", + "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", + "description": "PhenoGPT2 is an advanced phenotype recognition model, leveraging the robust capabilities of large language models.", "topics": [] }, { - "uid": "github/ggciag/mandyoc", - "url": "https://github.com/ggciag/mandyoc", - "rel": "/software/repository/github/ggciag/mandyoc", - "avatar": "https://avatars.githubusercontent.com/u/87135176?v=4", - "description": "MANDYOC is a finite element code written on top of the PETSc library to simulate thermo-chemical convection of the Earth's mantle", + "uid": "github/WGLab/LongReadSum", + "url": "https://github.com/WGLab/LongReadSum", + "rel": "/software/repository/github/WGLab/LongReadSum", + "avatar": "https://avatars.githubusercontent.com/u/5926337?v=4", + "description": "LongReadSum supports FASTA, FASTQ, BAM, FAST5, and sequencing_summary.txt file formats for quick generation of QC data in HTML and text format.", "topics": [] }, { - "uid": "github/rahil-makadia/grss", - "url": "https://github.com/rahil-makadia/grss", - "rel": "/software/repository/github/rahil-makadia/grss", - "avatar": "https://avatars.githubusercontent.com/u/40069449?v=4", - "description": "Gauss-Radau Small-body Simulator. Maintainer: @rahil-makadia", + "uid": "github/WGLab/InterVar", + "url": "https://github.com/WGLab/InterVar", + "rel": "/software/repository/github/WGLab/InterVar", + "avatar": "https://avatars1.githubusercontent.com/u/5926337?v=4", + "description": "A bioinformatics software tool for clinical interpretation of genetic variants by the 2015 ACMG-AMP guideline", + "topics": [] + }, + { + "uid": "github/gokalpcelik/ROHMMCLI", + "url": "https://github.com/gokalpcelik/ROHMMCLI", + "rel": "/software/repository/github/gokalpcelik/ROHMMCLI", + "avatar": "https://avatars.githubusercontent.com/u/37572619?v=4", + "description": "ROHMMCLI - Flexible HMM based homozygosity predictor.", "topics": [ - "asteroids", - "astronomy", - "orbit-determination", - "comets", - "orbit-propagation" + "science-research", + "next-generation-sequencing", + "genotyping", + "homozygosity" ] }, { - "uid": "github/Romea/romea-ros2-lidar", - "url": "https://github.com/Romea/romea-ros2-lidar", - "rel": "/software/repository/github/Romea/romea-ros2-lidar", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/moscibrodzka/ipole", + "url": "https://github.com/moscibrodzka/ipole", + "rel": "/software/repository/github/moscibrodzka/ipole", + "avatar": "https://avatars.githubusercontent.com/u/24761726?v=4", + "description": "ipole (master, originally published), ipole-v2.0 (v2.0 is more compact with additional features). This is the original repository for the ipole code. ", "topics": [] }, { - "uid": "github/Romea/romea-core-filtering", - "url": "https://github.com/Romea/romea-core-filtering", - "rel": "/software/repository/github/Romea/romea-core-filtering", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/dondi/GRNsight", + "url": "https://github.com/dondi/GRNsight", + "rel": "/software/repository/github/dondi/GRNsight", + "avatar": "https://avatars.githubusercontent.com/u/382242?v=4", + "description": "Web app and service for modeling and visualizing gene regulatory networks.", "topics": [] }, { - "uid": "github/Romea/adap2e", - "url": "https://github.com/Romea/adap2e", - "rel": "/software/repository/github/Romea/adap2e", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/EXP-code/EXP", + "url": "https://github.com/EXP-code/EXP", + "rel": "/software/repository/github/EXP-code/EXP", + "avatar": "https://avatars.githubusercontent.com/u/120035355?v=4", + "description": "Basis Function Expansion C++ library and Python package for running N-body galactic simulations and dynamical discovery", + "topics": [ + "basis-function-expansion", + "c-plus-plus", + "n-body-simulation", + "python", + "time-series-analysis", + "galactic-dynamics" + ] }, { - "uid": "github/Romea/alpo", - "url": "https://github.com/Romea/alpo", - "rel": "/software/repository/github/Romea/alpo", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/khyox/recentrifuge", + "url": "https://github.com/khyox/recentrifuge", + "rel": "/software/repository/github/khyox/recentrifuge", + "avatar": "https://avatars.githubusercontent.com/u/4109713?v=4", + "description": "Recentrifuge: robust comparative analysis and contamination removal for metagenomics", + "topics": [ + "metagenomics", + "low-biomass", + "centrifuge", + "lmat", + "clark", + "kraken", + "comparative-genomics", + "ngs", + "robustness", + "contamination", + "nanopore" + ] }, { - "uid": "github/Romea/romea-ros2-teleop", - "url": "https://github.com/Romea/romea-ros2-teleop", - "rel": "/software/repository/github/Romea/romea-ros2-teleop", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "uid": "github/leonzheng2/butterfly", + "url": "https://github.com/leonzheng2/butterfly", + "rel": "/software/repository/github/leonzheng2/butterfly", + "avatar": "https://avatars.githubusercontent.com/u/40190509?v=4", "description": null, "topics": [] }, { - "uid": "github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", - "url": "https://github.com/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-rtls-plugin", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/leonzheng2/efficient-butterfly", + "url": "https://github.com/leonzheng2/efficient-butterfly", + "rel": "/software/repository/github/leonzheng2/efficient-butterfly", + "avatar": "https://avatars.githubusercontent.com/u/40190509?v=4", + "description": "Code for reproducible research - Efficient identification of butterfly sparse matrix factorizations", "topics": [] }, { - "uid": "github/Romea/romea-core-imu", - "url": "https://github.com/Romea/romea-core-imu", - "rel": "/software/repository/github/Romea/romea-core-imu", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/pudu-py/pudu", + "url": "https://github.com/pudu-py/pudu", + "rel": "/software/repository/github/pudu-py/pudu", + "avatar": "https://avatars.githubusercontent.com/u/118768894?v=4", + "description": "A Python library for explainability of machine learinng algorithms in an agnostic, deterministic, and simple way.", "topics": [] }, { - "uid": "github/Romea/romea-ros2-cmd-mux", - "url": "https://github.com/Romea/romea-ros2-cmd-mux", - "rel": "/software/repository/github/Romea/romea-ros2-cmd-mux", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "uid": "github/AlexanderBartholomaeus/smORFer", + "url": "https://github.com/AlexanderBartholomaeus/smORFer", + "rel": "/software/repository/github/AlexanderBartholomaeus/smORFer", + "avatar": "https://avatars.githubusercontent.com/u/36157612?v=4", "description": null, "topics": [] }, { - "uid": "github/Romea/romea-ros2-camera", - "url": "https://github.com/Romea/romea-ros2-camera", - "rel": "/software/repository/github/Romea/romea-ros2-camera", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/dfguan/purge_dups", + "url": "https://github.com/dfguan/purge_dups", + "rel": "/software/repository/github/dfguan/purge_dups", + "avatar": "https://avatars.githubusercontent.com/u/6100864?v=4", + "description": "haplotypic duplication identification tool", "topics": [] }, { - "uid": "github/Romea/romea-ros2-localisation-utils", - "url": "https://github.com/Romea/romea-ros2-localisation-utils", - "rel": "/software/repository/github/Romea/romea-ros2-localisation-utils", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/biod/sambamba", + "url": "https://github.com/biod/sambamba", + "rel": "/software/repository/github/biod/sambamba", + "avatar": "https://avatars.githubusercontent.com/u/3667078?v=4", + "description": "Tools for working with SAM/BAM data", + "topics": [ + "sam", + "bam", + "bioinformatics" + ] }, { - "uid": "github/Romea/romea-ros2-robot-to-world-localisation-core", - "url": "https://github.com/Romea/romea-ros2-robot-to-world-localisation-core", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-core", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/tschad/pycelp", + "url": "https://github.com/tschad/pycelp", + "rel": "/software/repository/github/tschad/pycelp", + "avatar": "https://avatars.githubusercontent.com/u/13107102?v=4", + "description": "a Python package for Coronal Emission Line Polarization ", "topics": [] }, { - "uid": "github/Romea/romea-ros2-mobile-base", - "url": "https://github.com/Romea/romea-ros2-mobile-base", - "rel": "/software/repository/github/Romea/romea-ros2-mobile-base", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/wonderful1/CNV-PG", + "url": "https://github.com/wonderful1/CNV-PG", + "rel": "/software/repository/github/wonderful1/CNV-PG", + "avatar": "https://avatars.githubusercontent.com/u/19549825?v=4", + "description": "CNV-PG: a machine-learning framework for accurate copy number variation predicting and genotyping", "topics": [] }, { - "uid": "github/Romea/husky", - "url": "https://github.com/Romea/husky", - "rel": "/software/repository/github/Romea/husky", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/spacepy/spacepy", + "url": "https://github.com/spacepy/spacepy", + "rel": "/software/repository/github/spacepy/spacepy", + "avatar": "https://avatars.githubusercontent.com/u/2671009?v=4", + "description": "Space Science library for Python - contains superposed epoch classes, drift shell tracing, access to magnetic field models, streamline tracing, bootstrap confidence limits, time and coordinate conversions, etc.", + "topics": [ + "python", + "python2", + "python3", + "space", + "coordinates", + "batsrus", + "swmf", + "cdf" + ] }, { - "uid": "github/Romea/hunter", - "url": "https://github.com/Romea/hunter", - "rel": "/software/repository/github/Romea/hunter", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/MSABuschmann/sledgehamr", + "url": "https://github.com/MSABuschmann/sledgehamr", + "rel": "/software/repository/github/MSABuschmann/sledgehamr", + "avatar": "https://avatars.githubusercontent.com/u/22368016?v=4", + "description": "Sledgehamr is an AMReX-based code package to simulate the dynamics of coupled scalar fields on a 3-dimensional adaptive mesh.", "topics": [] }, { - "uid": "github/Romea/scout", - "url": "https://github.com/Romea/scout", - "rel": "/software/repository/github/Romea/scout", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/algolab/shark", + "url": "https://github.com/AlgoLab/shark", + "rel": "/software/repository/github/algolab/shark", + "avatar": "https://avatars.githubusercontent.com/u/449800?v=4", + "description": "Mapping-free software for fishing relevant reads in an RNA-Seq sample", + "topics": [ + "bioinformatics", + "rna-seq", + "alignment-free", + "filtering" + ] }, { - "uid": "github/Romea/romea-ros2-stereo-camera", - "url": "https://github.com/Romea/romea-ros2-stereo-camera", - "rel": "/software/repository/github/Romea/romea-ros2-stereo-camera", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/GRIT-RBSim/GRIT", + "url": "https://github.com/GRIT-RBSim/GRIT", + "rel": "/software/repository/github/GRIT-RBSim/GRIT", + "avatar": "https://avatars.githubusercontent.com/u/82004002?v=4", + "description": "Gravitational Rigid-body InTegrators, for simulating the coupled dynamics of both spin and orbit.", "topics": [] }, { - "uid": "github/Romea/romea-ros2-robot-to-human-localisation-core", - "url": "https://github.com/Romea/romea-ros2-robot-to-human-localisation-core", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-human-localisation-core", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/p-slash/qsonic", + "url": "https://github.com/p-slash/qsonic", + "rel": "/software/repository/github/p-slash/qsonic", + "avatar": "https://avatars.githubusercontent.com/u/5559154?v=4", + "description": "Continuum fitting for DESI", "topics": [] }, { - "uid": "github/Romea/romea-core-rtls", - "url": "https://github.com/Romea/romea-core-rtls", - "rel": "/software/repository/github/Romea/romea-core-rtls", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/AndreyTavleev/DiscVerSt", + "url": "https://github.com/AndreyTavleev/DiscVerSt", + "rel": "/software/repository/github/AndreyTavleev/DiscVerSt", + "avatar": "https://avatars.githubusercontent.com/u/37964711?v=4", + "description": "Code calculates vertical structure of accretion discs around neutron stars and black holes.", "topics": [] }, { - "uid": "github/Romea/romea-core-localisation-gps", - "url": "https://github.com/Romea/romea-core-localisation-gps", - "rel": "/software/repository/github/Romea/romea-core-localisation-gps", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/RichardObi/medigan", + "url": "https://github.com/RichardObi/medigan", + "rel": "/software/repository/github/RichardObi/medigan", + "avatar": "https://avatars.githubusercontent.com/u/47958412?v=4", + "description": "medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis", + "topics": [ + "medical", + "generation", + "gans", + "toolbox", + "python", + "deep-learning", + "machine-learning", + "model", + "computer-vision", + "dataset", + "endoscopy", + "generative-adversarial-network", + "generative-ai", + "generative-model", + "medical-image-analysis", + "medical-image-dataset", + "medical-imaging", + "radiology", + "synthesis", + "synthetic-data" + ] }, { - "uid": "github/Romea/romea-ros2-joy", - "url": "https://github.com/Romea/romea-ros2-joy", - "rel": "/software/repository/github/Romea/romea-ros2-joy", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/SMTG-UCL/surfaxe", + "url": "https://github.com/SMTG-UCL/surfaxe", + "rel": "/software/repository/github/SMTG-UCL/surfaxe", + "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", + "description": "Dealing with slabs for first principles calculations of surfaces", + "topics": [ + "python3", + "science", + "computational-chemistry", + "materials", + "surfaces", + "pymatgen", + "vasp" + ] }, { - "uid": "github/Romea/cinteo", - "url": "https://github.com/Romea/cinteo", - "rel": "/software/repository/github/Romea/cinteo", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/SMTG-UCL/ShakeNBreak", + "url": "https://github.com/SMTG-UCL/ShakeNBreak", + "rel": "/software/repository/github/SMTG-UCL/ShakeNBreak", + "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", + "description": "Defect structure-searching method employing chemically-guided bond distortions to locate ground-state and metastable structures of point defects in solid materials.", + "topics": [ + "materials", + "materials-informatics", + "point-defects", + "science", + "computational-chemistry", + "pymatgen", + "python3", + "symmetry-breaking", + "structure-searching", + "vasp", + "distortions", + "ab-initio", + "dft", + "materials-design", + "semiconductors" + ] }, { - "uid": "github/Romea/romea-core-path", - "url": "https://github.com/Romea/romea-core-path", - "rel": "/software/repository/github/Romea/romea-core-path", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/elixir-europe/rdmkit", + "url": "https://github.com/elixir-europe/rdmkit", + "rel": "/software/repository/github/elixir-europe/rdmkit", + "avatar": "https://avatars.githubusercontent.com/u/18418326?v=4", + "description": "ELIXIR Research Data Management Toolkit - Find the answers to your research data management questions here.", + "topics": [ + "research", + "data-management", + "rdm", + "toolkit" + ] }, { - "uid": "github/Romea/romea-core-common", - "url": "https://github.com/Romea/romea-core-common", - "rel": "/software/repository/github/Romea/romea-core-common", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/ERA-URBAN/netcdf2littler", + "url": "https://github.com/ERA-URBAN/netcdf2littler", + "rel": "/software/repository/github/ERA-URBAN/netcdf2littler", + "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", + "description": "An application to convert NetCDF files to the Little-R format. The Little-R format is the accepted input format for the WRF data assimilation system (WRFDA) preprocessor (obsproc). Currently only the conversion of synoptical weather stations are supported by this application.", + "topics": [ + "netcdf", + "littler", + "wrfda", + "wrf", + "convert" + ] }, { - "uid": "github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", - "url": "https://github.com/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-rtls-plugin", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", + "uid": "github/ERA-URBAN/fm128_radar", + "url": "https://github.com/ERA-URBAN/fm128_radar", + "rel": "/software/repository/github/ERA-URBAN/fm128_radar", + "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", "description": null, "topics": [] }, { - "uid": "github/Romea/romea-ros2-gps", - "url": "https://github.com/Romea/romea-ros2-gps", - "rel": "/software/repository/github/Romea/romea-ros2-gps", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/discsim/frank", + "url": "https://github.com/discsim/frank", + "rel": "/software/repository/github/discsim/frank", + "avatar": "https://avatars.githubusercontent.com/u/43750076?v=4", + "description": "1D radial brightness profile reconstruction for interferometric sources", "topics": [] }, { - "uid": "github/Romea/romea-ros2-rgbd-camera", - "url": "https://github.com/Romea/romea-ros2-rgbd-camera", - "rel": "/software/repository/github/Romea/romea-ros2-rgbd-camera", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/TeamLEGWORK/LEGWORK", + "url": "https://github.com/TeamLEGWORK/LEGWORK", + "rel": "/software/repository/github/TeamLEGWORK/LEGWORK", + "avatar": "https://avatars.githubusercontent.com/u/88508559?v=4", + "description": "simple package for gravitational wave calculations ", "topics": [] }, { - "uid": "github/Romea/romea-ros2-imu", - "url": "https://github.com/Romea/romea-ros2-imu", - "rel": "/software/repository/github/Romea/romea-ros2-imu", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/sheinasim/HiFiAdapterFilt", + "url": "https://github.com/sheinasim/HiFiAdapterFilt", + "rel": "/software/repository/github/sheinasim/HiFiAdapterFilt", + "avatar": "https://avatars.githubusercontent.com/u/7445687?v=4", + "description": "Remove CCS reads with remnant PacBio adapter sequences and convert outputs to a compressed .fastq (.fastq.gz).", "topics": [] }, { - "uid": "github/Romea/aroco", - "url": "https://github.com/Romea/aroco", - "rel": "/software/repository/github/Romea/aroco", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/YSOVAR/YSOVAR", + "url": "https://github.com/YSOVAR/YSOVAR", + "rel": "/software/repository/github/YSOVAR/YSOVAR", + "avatar": "https://avatars.githubusercontent.com/u/3372001?v=4", + "description": "Analyze YSOVAR lightcurves", + "topics": [ + "python", + "astronomy", + "time-series", + "data-analysis" + ] }, { - "uid": "github/Romea/romea-core-gps", - "url": "https://github.com/Romea/romea-core-gps", - "rel": "/software/repository/github/Romea/romea-core-gps", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/pelahi/VELOCIraptor-STF", + "url": "https://github.com/pelahi/VELOCIraptor-STF", + "rel": "/software/repository/github/pelahi/VELOCIraptor-STF", + "avatar": "https://avatars.githubusercontent.com/u/12030027?v=4", + "description": "Galaxy/(sub)Halo finder for N-body simulations", "topics": [] }, { - "uid": "github/Romea/robucar", - "url": "https://github.com/Romea/robucar", - "rel": "/software/repository/github/Romea/robucar", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/pelahi/TreeFrog", + "url": "https://github.com/pelahi/TreeFrog", + "rel": "/software/repository/github/pelahi/TreeFrog", + "avatar": "https://avatars.githubusercontent.com/u/12030027?v=4", + "description": "Software to build Halo Merger Trees/compare halo catalogs", "topics": [] }, { - "uid": "github/Romea/romea-ros2-robot-to-robot-localisation-core", - "url": "https://github.com/Romea/romea-ros2-robot-to-robot-localisation-core", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-robot-localisation-core", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, - "topics": [] + "uid": "github/dolaver/calsagos", + "url": "https://github.com/dolaver/calsagos", + "rel": "/software/repository/github/dolaver/calsagos", + "avatar": "https://avatars.githubusercontent.com/u/77640476?v=4", + "description": "Config files for my GitHub profile.", + "topics": [ + "config", + "github-config" + ] }, { - "uid": "github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", - "url": "https://github.com/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", - "rel": "/software/repository/github/Romea/romea-ros2-robot-to-world-localisation-rtls-plugin", - "avatar": "https://avatars.githubusercontent.com/u/20208303?v=4", - "description": null, + "uid": "github/mthorrell/gbnet", + "url": "https://github.com/mthorrell/gbnet", + "rel": "/software/repository/github/mthorrell/gbnet", + "avatar": "https://avatars.githubusercontent.com/u/15166269?v=4", + "description": "Gradient Boosting Modules for pytorch", "topics": [] }, { - "uid": "github/smaret/thindisk", - "url": "https://github.com/smaret/thindisk", - "rel": "/software/repository/github/smaret/thindisk", - "avatar": "https://avatars.githubusercontent.com/u/95471?v=4", - "description": "Compute the line emission from a geometrically thin protoplanetary disk", + "uid": "github/valentineap/pyprop8", + "url": "https://github.com/valentineap/pyprop8", + "rel": "/software/repository/github/valentineap/pyprop8", + "avatar": "https://avatars.githubusercontent.com/u/4602811?v=4", + "description": "A lightweight Python code to calculate the seismic response of a layered half-space (including static components), and derivatives of the wavefield wrt source components.", "topics": [] }, { - "uid": "github/smaret/astrochem", - "url": "https://github.com/smaret/astrochem", - "rel": "/software/repository/github/smaret/astrochem", - "avatar": "https://avatars.githubusercontent.com/u/95471?v=4", - "description": "A code to compute the abundances of chemical species in the interstellar medium", + "uid": "github/jfoster17/extinction-distances", + "url": "https://github.com/jfoster17/extinction-distances", + "rel": "/software/repository/github/jfoster17/extinction-distances", + "avatar": "https://avatars.githubusercontent.com/u/3639698?v=4", + "description": "Code to implement the blue star number count method from Foster et al. (2012) http://adsabs.harvard.edu/abs/2012ApJ...751..157F", "topics": [] }, { - "uid": "github/adigenova/wengan", - "url": "https://github.com/adigenova/wengan", - "rel": "/software/repository/github/adigenova/wengan", - "avatar": "https://avatars3.githubusercontent.com/u/7844296?v=4", - "description": "An accurate and ultra-fast hybrid genome assembler", + "uid": "github/cumbof/honto", + "url": "https://github.com/cumbof/honto", + "rel": "/software/repository/github/cumbof/honto", + "avatar": "https://avatars.githubusercontent.com/u/3764656?v=4", + "description": "A novel method for assessing and measuring homophily in networks", "topics": [ - "illumina", - "nanopore", - "pacbio", - "hybrid", - "genome-assembler" + "graphs", + "homophily", + "networks" ] }, { - "uid": "github/christopherburke/tess-point", - "url": "https://github.com/christopherburke/tess-point", - "rel": "/software/repository/github/christopherburke/tess-point", - "avatar": "https://avatars.githubusercontent.com/u/12038053?v=4", - "description": "Determine pixel coordinates for TESS targets", - "topics": [] + "uid": "github/cumbof/MetaSBT-DBs", + "url": "https://github.com/cumbof/MetaSBT-DBs", + "rel": "/software/repository/github/cumbof/MetaSBT-DBs", + "avatar": "https://avatars.githubusercontent.com/u/3764656?v=4", + "description": "MetaSBT public databases", + "topics": [ + "databases", + "metagenome-assembled-genomes", + "metagenomics", + "reference-genomes", + "sequence-bloom-trees" + ] }, { - "uid": "github/nabeelre/NIMBLE", - "url": "https://github.com/nabeelre/NIMBLE", - "rel": "/software/repository/github/nabeelre/NIMBLE", - "avatar": "https://avatars.githubusercontent.com/u/33795390?v=4", - "description": "A spherical Jeans modeling tool to compute a system's cumulative mass distribution from (observationally biased) 6D phase space coordinates", - "topics": [] + "uid": "github/anuwu/DAGN-Blindtest", + "url": "https://github.com/anuwu/GOTHIC", + "rel": "/software/repository/github/anuwu/DAGN-Blindtest", + "avatar": "https://avatars.githubusercontent.com/u/45432794?v=4", + "description": "Double Nuclei Galaxy Finder from SDSS. Check https://arxiv.org/abs/2011.12177", + "topics": [ + "sdss", + "astronomy", + "astrophysics", + "astroinformatics", + "image-processing", + "image-classification", + "rare-object-detection" + ] }, { - "uid": "github/nabeelre/BTSbot", - "url": "https://github.com/nabeelre/BTSbot", - "rel": "/software/repository/github/nabeelre/BTSbot", - "avatar": "https://avatars.githubusercontent.com/u/33795390?v=4", - "description": "Automated identification of supernovae with multi-modal deep learning", + "uid": "github/anuwu/GOTHIC", + "url": "https://github.com/anuwu/GOTHIC", + "rel": "/software/repository/github/anuwu/GOTHIC", + "avatar": "https://avatars.githubusercontent.com/u/45432794?v=4", + "description": "Double Nuclei Galaxy Finder from SDSS. Check https://arxiv.org/abs/2011.12177", "topics": [ + "sdss", "astronomy", "astrophysics", - "computer-vision", - "time-domain-astronomy", - "transient-astronomy", - "ztf" + "astroinformatics", + "image-processing", + "image-classification", + "rare-object-detection" ] }, { - "uid": "github/TommyJones/tidylda", - "url": "https://github.com/TommyJones/tidylda", - "rel": "/software/repository/github/TommyJones/tidylda", - "avatar": "https://avatars.githubusercontent.com/u/4990978?v=4", - "description": "Implements an algorithim for Latent Dirichlet Allocation using style conventions from the [tidyverse](https://style.tidyverse.org/) and [tidymodels](https://tidymodels.github.io/model-implementation-principles/index.html). ", + "uid": "github/CITCOM-project/CausalTestingFramework", + "url": "https://github.com/CITCOM-project/CausalTestingFramework", + "rel": "/software/repository/github/CITCOM-project/CausalTestingFramework", + "avatar": "https://avatars.githubusercontent.com/u/76901837?v=4", + "description": "A causal inference-driven framework for functional black-box testing of complex software.", + "topics": [] + }, + { + "uid": "github/NSAPH-Software/CRE", + "url": "https://github.com/NSAPH-Software/CRE", + "rel": "/software/repository/github/NSAPH-Software/CRE", + "avatar": "https://avatars.githubusercontent.com/u/99349300?v=4", + "description": "The Causal Rule Ensemble Method", "topics": [] }, { - "uid": "github/pudeIko/piva", - "url": "https://github.com/pudeIko/piva", - "rel": "/software/repository/github/pudeIko/piva", - "avatar": "https://avatars.githubusercontent.com/u/37271202?v=4", - "description": "Interactive tools for the visualization and analysis of multidimensional photoemission data", - "topics": [ - "angle-resolved-photoemission-spectroscopy", - "arpes", - "condensed-matter-physics", - "data-analysis", - "data-visualization", - "experimental-physics", - "gui", - "interactive-visualizations", - "physics", - "pyqt5", - "python", - "quantum-materials", - "synchrotron-based-data", - "xps" - ] + "uid": "github/NSAPH-Software/GPCERF", + "url": "https://github.com/NSAPH-Software/GPCERF", + "rel": "/software/repository/github/NSAPH-Software/GPCERF", + "avatar": "https://avatars.githubusercontent.com/u/99349300?v=4", + "description": null, + "topics": [] }, { - "uid": "github/milanofthe/pathsim", - "url": "https://github.com/milanofthe/pathsim", - "rel": "/software/repository/github/milanofthe/pathsim", - "avatar": "https://avatars.githubusercontent.com/u/105657697?v=4", - "description": "A differentiable block-based time domain hybrid system simulation framework.", - "topics": [ - "blockdiagram", - "control-systems", - "hierarchical-modeling", - "nonlinear-dynamics", - "simulation", - "system-simulation", - "transient-analysis", - "simulation-framework", - "python", - "framework", - "automatic-differentiation", - "differentiable-simulations" - ] + "uid": "github/v-morello/iqrm", + "url": "https://github.com/v-morello/iqrm", + "rel": "/software/repository/github/v-morello/iqrm", + "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", + "description": "A minimal implementation of the IQRM interference flagging algorithm for radio pulsar and transient searches", + "topics": [] }, { - "uid": "github/cosimameyer/overviewR", - "url": "https://github.com/cosimameyer/overviewR", - "rel": "/software/repository/github/cosimameyer/overviewR", - "avatar": "https://avatars.githubusercontent.com/u/7782895?v=4", - "description": "Easily Extracting Information About Your Data", - "topics": [ - "package-development" - ] + "uid": "github/v-morello/riptide", + "url": "https://github.com/v-morello/riptide", + "rel": "/software/repository/github/v-morello/riptide", + "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", + "description": "Pulsar searching with the Fast Folding Algorithm (FFA)", + "topics": [] }, { - "uid": "github/Acellera/htmd", - "url": "https://github.com/Acellera/htmd", - "rel": "/software/repository/github/Acellera/htmd", - "avatar": "https://avatars.githubusercontent.com/u/7776839?v=4", - "description": "HTMD: Programming Environment for Molecular Discovery", - "topics": [ - "molecular-simulations", - "drug-discovery", - "automate", - "htmd" - ] + "uid": "github/v-morello/clfd", + "url": "https://github.com/v-morello/clfd", + "rel": "/software/repository/github/v-morello/clfd", + "avatar": "https://avatars.githubusercontent.com/u/31064823?v=4", + "description": " Smart RFI removal algorithms to be used on folded pulsar search and timing data", + "topics": [] }, { - "uid": "github/jan-orkisz/colume", - "url": "https://github.com/jan-orkisz/colume", - "rel": "/software/repository/github/jan-orkisz/colume", - "avatar": "https://avatars.githubusercontent.com/u/191116973?v=4", - "description": "Estimating volume density of dense insterstellar clouds based on column density maps.", + "uid": "github/wangsiwei2010/FPMVS-CAG", + "url": "https://github.com/wangsiwei2010/FPMVS-CAG", + "rel": "/software/repository/github/wangsiwei2010/FPMVS-CAG", + "avatar": "https://avatars.githubusercontent.com/u/16240342?v=4", + "description": "code of \"Fast Parameter-free Multi-view Subspace Clustering with Consensus Anchor Guidance \" published in IEEE TIP2022", "topics": [] }, { - "uid": "github/naonori/hitomi", - "url": "https://github.com/naonori/hitomi", - "rel": "/software/repository/github/naonori/hitomi", - "avatar": "https://avatars.githubusercontent.com/u/9441428?v=4", - "description": "Public repository for the Hitomi Code", + "uid": "github/arviz-devs/arviz", + "url": "https://github.com/arviz-devs/arviz", + "rel": "/software/repository/github/arviz-devs/arviz", + "avatar": "https://avatars2.githubusercontent.com/u/13554846?v=4", + "description": "Exploratory analysis of Bayesian models with Python", "topics": [] }, { - "uid": "github/gerthmicha/wolbachia-mlst", - "url": "https://github.com/gerthmicha/wolbachia-mlst", - "rel": "/software/repository/github/gerthmicha/wolbachia-mlst", - "avatar": "https://avatars2.githubusercontent.com/u/17022831?v=4", - "description": "Data from Bleidorn & Gerth (2017) A critical re-evaluation of multilocus sequence typing (MLST) efforts in Wolbachia. https://doi.org/10.1093/femsec/fix163", + "uid": "github/arviz-devs/preliz", + "url": "https://github.com/arviz-devs/preliz", + "rel": "/software/repository/github/arviz-devs/preliz", + "avatar": "https://avatars.githubusercontent.com/u/13554846?v=4", + "description": "Tools to help you pick a prior", "topics": [] }, { - "uid": "github/tkchafin/autostreamtree", - "url": "https://github.com/tkchafin/autostreamtree", - "rel": "/software/repository/github/tkchafin/autostreamtree", - "avatar": "https://avatars.githubusercontent.com/u/10889979?v=4", - "description": "Stream trees for SNP datasets", + "uid": "github/tomlouden/spiderman", + "url": "https://github.com/tomlouden/SPIDERMAN", + "rel": "/software/repository/github/tomlouden/spiderman", + "avatar": "https://avatars.githubusercontent.com/u/6517539?v=4", + "description": "A fast code to simulate secondary transits and phase curves", "topics": [] }, { - "uid": "github/PTsolvers/JustRelax.jl", - "url": "https://github.com/PTsolvers/JustRelax.jl", - "rel": "/software/repository/github/PTsolvers/JustRelax.jl", - "avatar": "https://avatars.githubusercontent.com/u/79769824?v=4", - "description": "Pseudo-transient accelerated iterative solvers", + "uid": "github/kyleaoman/martini", + "url": "https://github.com/kyleaoman/martini", + "rel": "/software/repository/github/kyleaoman/martini", + "avatar": "https://avatars.githubusercontent.com/u/32932511?v=4", + "description": "Mock spatially resolved spectral line observations of simulated galaxies. Documentation:", "topics": [ - "cuda", - "geodynamics", - "hpc", - "julialang", - "parallel" + "astrophysics", + "radio-astronomy" ] }, { - "uid": "github/viromelab/tracespipe", - "url": "https://github.com/viromelab/tracespipe", - "rel": "/software/repository/github/viromelab/tracespipe", - "avatar": "https://avatars.githubusercontent.com/u/52006995?v=4", - "description": "Reconstruction and analysis of viral and host genomes at multi-organ level", + "uid": "github/JD2112/methylr", + "url": "https://github.com/JD2112/methylr", + "rel": "/software/repository/github/JD2112/methylr", + "avatar": "https://avatars.githubusercontent.com/u/15922543?v=4", + "description": "methylR: a single shiny solution from sequencer data to pathway analysis", "topics": [ - "virus", - "metagenomics", - "pipeline", - "forensics", - "clinical", - "virology", - "mtdna", - "multi-organ", - "ngs", - "ngs-pipeline" + "r", + "shiny-apps", + "dna-methylation", + "docker-container", + "documentation", + "illumina", + "testdata", + "web-server" ] }, { - "uid": "github/barnabytprowe/imcom", - "url": "https://github.com/barnabytprowe/imcom", - "rel": "/software/repository/github/barnabytprowe/imcom", - "avatar": "https://avatars.githubusercontent.com/u/1454961?v=4", - "description": "Public repository for the IMCOM (IMage COMbination) software described in Rowe, Hirata & Rhodes (2011)", - "topics": [] + "uid": "github/JD2112/TwistMethylFlow", + "url": "https://github.com/JD2112/TwistMethylFlow", + "rel": "/software/repository/github/JD2112/TwistMethylFlow", + "avatar": "https://avatars.githubusercontent.com/u/15922543?v=4", + "description": "A NextFlow pipeline for Twist NGS DNA Methylation data analysis", + "topics": [ + "dna", + "dna-methylation", + "docker", + "nextflow", + "singularity", + "twist" + ] }, { - "uid": "github/JelfsMaterialsGroup/stk", - "url": "https://github.com/JelfsMaterialsGroup/stk", - "rel": "/software/repository/github/JelfsMaterialsGroup/stk", - "avatar": "https://avatars.githubusercontent.com/u/36706109?v=4", - "description": "Mirror of lukasturcani/stk - please file issues / fork / star that repo. ", - "topics": [] + "uid": "github/gwpy/gwpy", + "url": "https://github.com/gwpy/gwpy", + "rel": "/software/repository/github/gwpy/gwpy", + "avatar": "https://avatars.githubusercontent.com/u/5383739?v=4", + "description": "Package for analysing and characterising gravitational wave data in python", + "topics": [ + "python", + "gravitational-waves", + "gwpy", + "gpl" + ] }, { - "uid": "github/online-ml/deep-river", - "url": "https://github.com/online-ml/deep-river", - "rel": "/software/repository/github/online-ml/deep-river", - "avatar": "https://avatars.githubusercontent.com/u/47002673?v=4", - "description": null, + "uid": "github/lmcinnes/umap", + "url": "https://github.com/lmcinnes/umap", + "rel": "/software/repository/github/lmcinnes/umap", + "avatar": "https://avatars.githubusercontent.com/u/11962885?v=4", + "description": "Uniform Manifold Approximation and Projection", "topics": [ - "data-science", - "deep-learning", - "incremental-learning", + "umap", + "dimensionality-reduction", + "visualization", "machine-learning", - "neural-network", - "online-deep-learning", - "online-learning", - "outlier-detection", - "pytorch", - "stream" + "topological-data-analysis" ] }, { - "uid": "github/RemoteSensingTools/vSmartMOM.jl", - "url": "https://github.com/RemoteSensingTools/vSmartMOM.jl", - "rel": "/software/repository/github/RemoteSensingTools/vSmartMOM.jl", - "avatar": "https://avatars.githubusercontent.com/u/83097293?v=4", - "description": "A full end-to-end modular software suite for radiative transfer and related atmospheric analysis", + "uid": "github/seung-lab/FlyWirePaper", + "url": "https://github.com/seung-lab/FlyWirePaper", + "rel": "/software/repository/github/seung-lab/FlyWirePaper", + "avatar": "https://avatars.githubusercontent.com/u/796718?v=4", + "description": "Source code and data to reproduce analyses from the FlyWire paper.", "topics": [] }, { - "uid": "github/nworbde/dStar", - "url": "https://github.com/nworbde/dStar", - "rel": "/software/repository/github/nworbde/dStar", - "avatar": "https://avatars.githubusercontent.com/u/7050112?v=4", - "description": "routines for computing neutron star structure and evolution", - "topics": [ - "neutron-stars", - "x-ray-binaries", - "astrophysics" - ] + "uid": "github/algo-cancer/CAMMiQ", + "url": "https://github.com/algo-cancer/CAMMiQ", + "rel": "/software/repository/github/algo-cancer/CAMMiQ", + "avatar": "https://avatars.githubusercontent.com/u/42399598?v=4", + "description": "Metagenomics microbial abundance quantification", + "topics": [] }, { - "uid": "github/ECP-WarpX/WarpX", - "url": "https://github.com/ECP-WarpX/WarpX", - "rel": "/software/repository/github/ECP-WarpX/WarpX", - "avatar": "https://avatars.githubusercontent.com/u/32690356?v=4", - "description": "WarpX is an advanced, time-based electromagnetic & electrostatic Particle-In-Cell code.", + "uid": "github/JuliaGeo/CFTime.jl", + "url": "https://github.com/JuliaGeo/CFTime.jl", + "rel": "/software/repository/github/JuliaGeo/CFTime.jl", + "avatar": "https://avatars.githubusercontent.com/u/10616454?v=4", + "description": "Julia library for decoding time units conforming to the Climate and Forecasting (CF) netCDF conventions.", "topics": [ - "laser", - "plasma", - "physics", - "gpu", - "simulation", - "particle-in-cell", - "pic", - "research" + "cf-conventions", + "julia", + "netcdf", + "time" ] }, { - "uid": "github/pipliggins/EVolve", - "url": "https://github.com/pipliggins/EVolve", - "rel": "/software/repository/github/pipliggins/EVolve", - "avatar": "https://avatars.githubusercontent.com/u/55396775?v=4", - "description": "An atmospheric growth and evolution model based on the EVo degassing model and FastChem 2.0", + "uid": "github/marcocalza89/GrayHawk", + "url": "https://github.com/marcocalza89/GrayHawk", + "rel": "/software/repository/github/marcocalza89/GrayHawk", + "avatar": "https://avatars.githubusercontent.com/u/160862765?v=4", + "description": "Tools for computing GrayBody Factors of Spherically Symmetric BHs for different field spin", "topics": [] }, { - "uid": "github/NLeSC/xenon-flow", - "url": "https://github.com/xenon-middleware/xenon-flow", - "rel": "/software/repository/github/NLeSC/xenon-flow", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "Run CWL workflows using Xenon", + "uid": "github/damienmarsic/Parent-map", + "url": "https://github.com/damienmarsic/Parent-map", + "rel": "/software/repository/github/damienmarsic/Parent-map", + "avatar": "https://avatars.githubusercontent.com/u/11306128?v=4", + "description": "Analyze parental contributions to evolved or engineered protein or DNA sequences", + "topics": [] + }, + { + "uid": "github/kbarbary/nestle", + "url": "https://github.com/kbarbary/nestle", + "rel": "/software/repository/github/kbarbary/nestle", + "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", + "description": "Pure Python, MIT-licensed implementation of nested sampling algorithms for evaluating Bayesian evidence.", "topics": [ - "xenon", - "cwl", - "workflow", - "java" + "python", + "nested-sampling", + "bayesian-inference" ] }, { - "uid": "github/NLeSC/eEcology-Annotation-WS", - "url": "https://github.com/NLeSC/eEcology-Annotation-WS", - "rel": "/software/repository/github/NLeSC/eEcology-Annotation-WS", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Webservice for eEcology Annotation project.", + "uid": "github/kbarbary/sep", + "url": "https://github.com/kbarbary/sep", + "rel": "/software/repository/github/kbarbary/sep", + "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", + "description": "Python and C library for source extraction and photometry", "topics": [] }, { - "uid": "github/NLeSC/DiVE", - "url": "https://github.com/NLeSC/DiVE", - "rel": "/software/repository/github/NLeSC/DiVE", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "An interactive 3D web viewer of up to million points on one screen that represent data. Provides interaction for viewing high-dimensional data that has been previously embedded in 3D or 2D. Based on graphosaurus.js and three.js. For a Linux release of a complete embedding+visualization pipeline please visit https://github.com/sonjageorgievska/Embed-Dive.", + "uid": "github/kbarbary/extinction", + "url": "https://github.com/kbarbary/extinction", + "rel": "/software/repository/github/kbarbary/extinction", + "avatar": "https://avatars.githubusercontent.com/u/970135?v=4", + "description": "Fast interstellar dust extinction laws in Python", "topics": [ - "interactive-visualizations", - "3d-data", - "embedded-data", - "web-application", - "manifold-learning", - "non-linear-dimensionality-reduction", - "high-dimensional-data" + "extinction", + "python" ] }, { - "uid": "github/NLeSC/nlesc-serverless-boilerplate", - "url": "https://github.com/NLeSC/nlesc-serverless-boilerplate", - "rel": "/software/repository/github/NLeSC/nlesc-serverless-boilerplate", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "An AWS amplify boilerplate web application", + "uid": "github/sensein/etelemetry-client", + "url": "https://github.com/sensein/etelemetry-client", + "rel": "/software/repository/github/sensein/etelemetry-client", + "avatar": "https://avatars.githubusercontent.com/u/47326880?v=4", + "description": "Etelemetry client", "topics": [] }, { - "uid": "github/NLeSC/SalientDetector-python", - "url": "https://github.com/NLeSC/SalientDetector-python", - "rel": "/software/repository/github/NLeSC/SalientDetector-python", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Python package for Large Scale Imaging research @ NLeSC", - "topics": [] + "uid": "github/threeML/threeML", + "url": "https://github.com/threeML/threeML", + "rel": "/software/repository/github/threeML/threeML", + "avatar": "https://avatars.githubusercontent.com/u/44911645?v=4", + "description": "The Multi-Mission Maximum Likelihood framework (3ML)", + "topics": [ + "python-environment", + "xspec", + "fermi", + "fermi-science", + "xspec-models", + "python", + "astronomy", + "spectral-analysis", + "multi-wavelength", + "hawc" + ] }, { - "uid": "github/NLeSC/eAstroViz", - "url": "https://github.com/NLeSC/eAstroViz", - "rel": "/software/repository/github/NLeSC/eAstroViz", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": null, - "topics": [] + "uid": "github/threeML/astromodels", + "url": "https://github.com/threeML/astromodels", + "rel": "/software/repository/github/threeML/astromodels", + "avatar": "https://avatars.githubusercontent.com/u/44911645?v=4", + "description": "Spatial and spectral models for astrophysics", + "topics": [ + "astrophysics", + "spectral-models", + "modeling-tool", + "astronomy", + "multi-wavelength", + "multi-messenger" + ] }, { - "uid": "github/NLeSC/structure-from-motion", - "url": "https://github.com/NLeSC/structure-from-motion", - "rel": "/software/repository/github/NLeSC/structure-from-motion", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Structure from Motion Pipeline", + "uid": "github/lrnv/cort", + "url": "https://github.com/lrnv/cort", + "rel": "/software/repository/github/lrnv/cort", + "avatar": "https://avatars3.githubusercontent.com/u/15571061?v=4", + "description": "Classes and Tools For Some Empirical and Non-parametrical Copula Models.", "topics": [] }, { - "uid": "github/NLeSC/baklava", - "url": "https://github.com/NLeSC/baklava", - "rel": "/software/repository/github/NLeSC/baklava", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Deploy a Kubernetes cluster and big data services on the cloud.", + "uid": "github/lrnv/Copulas.jl", + "url": "https://github.com/lrnv/Copulas.jl", + "rel": "/software/repository/github/lrnv/Copulas.jl", + "avatar": "https://avatars.githubusercontent.com/u/15571061?v=4", + "description": "A fully `Distributions.jl`-compliant copula package", "topics": [ - "kubernetes", - "kubernetes-deployment", - "opennebula", - "ansible", - "terraform", - "kubespray", - "glusterfs" + "julia", + "copula" ] }, { - "uid": "github/NLeSC/SalientDetector-matlab", - "url": "https://github.com/NLeSC/SalientDetector-matlab", - "rel": "/software/repository/github/NLeSC/SalientDetector-matlab", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "MATLAB Software for Large Scale Imaging research @ NLeSc", - "topics": [] - }, - { - "uid": "github/NLeSC/pycoeman", - "url": "https://github.com/NLeSC/pycoeman", - "rel": "/software/repository/github/NLeSC/pycoeman", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Python Commands Execution Manager", + "uid": "github/Ohervet/Bjet_MCMC", + "url": "https://github.com/Ohervet/Bjet_MCMC", + "rel": "/software/repository/github/Ohervet/Bjet_MCMC", + "avatar": "https://avatars.githubusercontent.com/u/52715983?v=4", + "description": "Bjet_MCMC is a tool to to automatically model multiwavelength spectral energy distributions of blazars, considering one-zone synchrotron-self-Compton (SSC) model with or without the addition of external inverse-Compton process from the thermal emission of the nucleus. It also contains manual fitting functionalities for multi-zone SSC modeling. ", "topics": [] }, { - "uid": "github/NLeSC/spot", - "url": "https://github.com/NLeSC/spot", - "rel": "/software/repository/github/NLeSC/spot", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Try the demo", + "uid": "github/gausspy/gausspy", + "url": "https://github.com/gausspy/gausspy", + "rel": "/software/repository/github/gausspy/gausspy", + "avatar": "https://avatars.githubusercontent.com/u/22684473?v=4", + "description": "GaussPy: Python tool for implementing Autonomous Gaussian Decomposition", "topics": [ - "spot", - "visualization", - "crossfilter", - "javascript", - "cross-platform", - "web-app" + "hacktoberfest" ] }, { - "uid": "github/NLeSC/PattyAnalytics", - "url": "https://github.com/NLeSC/PattyAnalytics", - "rel": "/software/repository/github/NLeSC/PattyAnalytics", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Reusable point cloud analytics software. Includes segmentation, registration, file format conversion. ", + "uid": "github/FunctionalUrology/MLcps", + "url": "https://github.com/FunctionalUrology/MLcps", + "rel": "/software/repository/github/FunctionalUrology/MLcps", + "avatar": "https://avatars.githubusercontent.com/u/99481262?v=4", + "description": null, "topics": [] }, { - "uid": "github/NLeSC/ahn-pointcloud-viewer-ws", - "url": "https://github.com/NLeSC/ahn-pointcloud-viewer-ws", - "rel": "/software/repository/github/NLeSC/ahn-pointcloud-viewer-ws", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Webservice for ahn pointcloud viewer", + "uid": "github/kowallus/mbgc", + "url": "https://github.com/kowallus/mbgc", + "rel": "/software/repository/github/kowallus/mbgc", + "avatar": "https://avatars.githubusercontent.com/u/6030543?v=4", + "description": "Multiple Bacteria Genome Compressor (MBGC)", "topics": [] }, { - "uid": "github/NLeSC/UncertaintyVisualization", - "url": "https://github.com/NLeSC/UncertaintyVisualization", - "rel": "/software/repository/github/NLeSC/UncertaintyVisualization", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": null, + "uid": "github/xiaotiand/FunFor", + "url": "https://github.com/xiaotiand/FunFor", + "rel": "/software/repository/github/xiaotiand/FunFor", + "avatar": "https://avatars.githubusercontent.com/u/87001934?v=4", + "description": "FunFor R package", "topics": [] }, { - "uid": "github/NLeSC/python-template", - "url": "https://github.com/NLeSC/python-template", - "rel": "/software/repository/github/NLeSC/python-template", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Netherlands eScience Center Python Template", - "topics": [ - "cookiecutter", - "python" - ] + "uid": "github/andresmegias/gildas-class-python", + "url": "https://github.com/andresmegias/gildas-class-python", + "rel": "/software/repository/github/andresmegias/gildas-class-python", + "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", + "description": "Python pipeline to use GILDAS-CLASS in an automated way", + "topics": [] }, { - "uid": "github/NLeSC/eEcology-Classification", - "url": "https://github.com/NLeSC/eEcology-Classification", - "rel": "/software/repository/github/NLeSC/eEcology-Classification", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Classification tool", + "uid": "github/andresmegias/richvalues", + "url": "https://github.com/andresmegias/richvalues", + "rel": "/software/repository/github/andresmegias/richvalues", + "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", + "description": "Python library for dealing with uncertainties and upper/lower limits", "topics": [] }, { - "uid": "github/NLeSC/eEcology-script-wrapper", - "url": "https://github.com/NLeSC/eEcology-script-wrapper", - "rel": "/software/repository/github/NLeSC/eEcology-script-wrapper", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Web application to make Matlab, R scripts available.", + "uid": "github/andresmegias/radex-python", + "url": "https://github.com/andresmegias/radex-python", + "rel": "/software/repository/github/andresmegias/radex-python", + "avatar": "https://avatars.githubusercontent.com/u/109989219?v=4", + "description": "Python interface for using the software RADEX", "topics": [] }, { - "uid": "github/NLeSC/eEcology-SMS-reciever", - "url": "https://github.com/NLeSC/eEcology-SMS-reciever", - "rel": "/software/repository/github/NLeSC/eEcology-SMS-reciever", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Webservice to store SMS messages into a database table", + "uid": "github/teamPSG/kNN_Sleep_Scorer_kNNSS", + "url": "https://github.com/teamPSG/kNN_Sleep_Scorer_kNNSS", + "rel": "/software/repository/github/teamPSG/kNN_Sleep_Scorer_kNNSS", + "avatar": "https://avatars1.githubusercontent.com/u/64002817?v=4", + "description": "A matlab package for automated sleep scoring using the k-nearest neighbors algorithm", "topics": [] }, { - "uid": "github/NLeSC/xenon-grpc", - "url": "https://github.com/xenon-middleware/xenon-grpc", - "rel": "/software/repository/github/NLeSC/xenon-grpc", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "Xenon grpc based server", + "uid": "github/jonbmartin/pulpy", + "url": "https://github.com/jonbmartin/pulpy", + "rel": "/software/repository/github/jonbmartin/pulpy", + "avatar": "https://avatars.githubusercontent.com/u/44706383?v=4", + "description": "Pulses in Python", "topics": [] }, { - "uid": "github/NLeSC/MAGMa", - "url": "https://github.com/NLeSC/MAGMa", - "rel": "/software/repository/github/NLeSC/MAGMa", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "eMetabolomics project: Mass Annotation based on in silico Generated Metabolites", + "uid": "github/kundajelab/phantompeakqualtools", + "url": "https://github.com/kundajelab/phantompeakqualtools", + "rel": "/software/repository/github/kundajelab/phantompeakqualtools", + "avatar": "https://avatars.githubusercontent.com/u/7598085?v=4", + "description": "This package computes informative enrichment and quality measures for ChIP-seq/DNase-seq/FAIRE-seq/MNase-seq data. It can also be used to obtain robust estimates of the predominant fragment length or characteristic tag shift values in these assays.", "topics": [] }, { - "uid": "github/NLeSC/cptm", - "url": "https://github.com/NLeSC/cptm", - "rel": "/software/repository/github/NLeSC/cptm", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Cross-Perspective Topic Modeling", + "uid": "github/rjsmethurst/snitch", + "url": "https://github.com/rjsmethurst/snitch", + "rel": "/software/repository/github/rjsmethurst/snitch", + "avatar": "https://avatars.githubusercontent.com/u/5754386?v=4", + "description": "Bayesian inference of star formation histories using emission and absorption spectral features", "topics": [] }, { - "uid": "github/NLeSC/eSalsa-MPI", - "url": "https://github.com/NLeSC/eSalsa-MPI", - "rel": "/software/repository/github/NLeSC/eSalsa-MPI", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "This project contains the wide area MPI used in the eSalsa project", - "topics": [] + "uid": "github/AMSSwanglab/RE-GOA", + "url": "https://github.com/AMSSwanglab/RE-GOA", + "rel": "/software/repository/github/AMSSwanglab/RE-GOA", + "avatar": "https://avatars.githubusercontent.com/u/44538141?v=4", + "description": "A tool for non-coding genomic regions function enrichment analysis based on Regulatory Elements Gene Ontology Annotation (RE-GOA)", + "topics": [ + "gene-ontology", + "network-embedding", + "regulatory-elements" + ] }, { - "uid": "github/NLeSC/lokum", - "url": "https://github.com/NLeSC/lokum", - "rel": "/software/repository/github/NLeSC/lokum", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Deploy GlusterFS, Docker, Spark and JupyterHub services on bare-metal cluster.", + "uid": "github/AMSSwanglab/SpecVar", + "url": "https://github.com/AMSSwanglab/SpecVar", + "rel": "/software/repository/github/AMSSwanglab/SpecVar", + "avatar": "https://avatars.githubusercontent.com/u/44538141?v=4", + "description": "SpecVar is a convenient tool for estimating interpretable genetic correlation of human complex traits and annotating the SNPs with context specific regulatory networks", "topics": [ - "apache-spark", - "glusterfs", - "jupyterhub", - "cassandra", - "dask" + "gwas", + "regulatory-networks", + "variant-interpretation", + "phenotopic-correlation", + "relevant-tissue" ] }, { - "uid": "github/NLeSC/docker-couch-admin", - "url": "https://github.com/NLeSC/docker-couch-admin", - "rel": "/software/repository/github/NLeSC/docker-couch-admin", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Configures a web service using angular-schema-form and CouchDB", - "topics": [] + "uid": "github/multiwavelength/gleam", + "url": "https://github.com/multiwavelength/gleam", + "rel": "/software/repository/github/multiwavelength/gleam", + "avatar": "https://avatars.githubusercontent.com/u/59348944?v=4", + "description": "Galaxy Line Emission & Absorption Modeling", + "topics": [ + "astronomy", + "astronomy-library", + "spectroscopy", + "galaxies", + "agn", + "extragalactic", + "spectral-lines", + "emission-lines", + "absorption-lines", + "astronomy-software", + "1d-spectra" + ] }, { - "uid": "github/NLeSC/python-pcl", - "url": "https://github.com/NLeSC/python-pcl", - "rel": "/software/repository/github/NLeSC/python-pcl", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Python bindings to the pointcloud library (pcl)", + "uid": "github/multiwavelength/redshifts", + "url": "https://github.com/multiwavelength/redshifts", + "rel": "/software/repository/github/multiwavelength/redshifts", + "avatar": "https://avatars.githubusercontent.com/u/59348944?v=4", + "description": "Search the VizieR and NED databases for spectroscopic redshifts around positions of interest.", "topics": [] }, { - "uid": "github/NLeSC/mcfly", - "url": "https://github.com/NLeSC/mcfly", - "rel": "/software/repository/github/NLeSC/mcfly", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "A deep learning tool for time series classification", - "topics": [] + "uid": "github/pymedphys/pymedphys", + "url": "https://github.com/pymedphys/pymedphys", + "rel": "/software/repository/github/pymedphys/pymedphys", + "avatar": "https://avatars.githubusercontent.com/u/47132275?v=4", + "description": "A community effort to develop an open standard library for Medical Physics in Python. Building quality transparent software together via peer review and open source distribution. Open code is better science.", + "topics": [ + "medical-physics", + "dicom", + "radiation-oncology", + "radiation-therapy", + "radiation-physics", + "radiotherapy" + ] }, { - "uid": "github/NLeSC/compressing-the-sky", - "url": "https://github.com/NLeSC/compressing-the-sky", - "rel": "/software/repository/github/NLeSC/compressing-the-sky", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Compressing the Sky project with CWI DA", + "uid": "github/podondra/bayesian-sznet", + "url": "https://github.com/podondra/bayesian-sznet", + "rel": "/software/repository/github/podondra/bayesian-sznet", + "avatar": "https://avatars.githubusercontent.com/u/15136508?v=4", + "description": "Bayesian deep learning to predict redshift with uncertainty", "topics": [] }, { - "uid": "github/NLeSC/OCTSegmentation", - "url": "https://github.com/NLeSC/OCTSegmentation", - "rel": "/software/repository/github/NLeSC/OCTSegmentation", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "EYR4-OCTSEG ", + "uid": "github/podondra/eidein", + "url": "https://github.com/podondra/eidein", + "rel": "/software/repository/github/podondra/eidein", + "avatar": "https://avatars.githubusercontent.com/u/15136508?v=4", + "description": "Interactive tool for dimensionality reduction of spectra and their visualisation", "topics": [] }, { - "uid": "github/NLeSC/root-conda-recipes", - "url": "https://github.com/NLeSC/root-conda-recipes", - "rel": "/software/repository/github/NLeSC/root-conda-recipes", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Conda recipes for building ROOT 5 and ROOT 6 binaries, root_numpy, rootpy, root_pandas, with both Python 2 and Python 3 support.", + "uid": "github/BenMql/coral", + "url": "https://github.com/BenMql/coral", + "rel": "/software/repository/github/BenMql/coral", + "avatar": "https://avatars.githubusercontent.com/u/42280575?v=4", + "description": "Parallel spectral solver for partial differential equations in the plane layer geometry. ", "topics": [] }, { - "uid": "github/NLeSC/noodles", - "url": "https://github.com/NLeSC/noodles", - "rel": "/software/repository/github/NLeSC/noodles", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Computational workflow engine, making distributed computing in Python easy!", + "uid": "github/NextGenCMB/lensitbiases", + "url": "https://github.com/NextGenCMB/lensitbiases", + "rel": "/software/repository/github/NextGenCMB/lensitbiases", + "avatar": "https://avatars.githubusercontent.com/u/72163365?v=4", + "description": "rfft-based flat-sky CMB lensing tools", "topics": [] }, { - "uid": "github/NLeSC/osmium", - "url": "https://github.com/xenon-middleware/osmium", - "rel": "/software/repository/github/NLeSC/osmium", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "Xenon Job Webservice", - "topics": [] + "uid": "github/ewels/MultiQC", + "url": "https://github.com/MultiQC/MultiQC", + "rel": "/software/repository/github/ewels/MultiQC", + "avatar": "https://avatars.githubusercontent.com/u/18548644?v=4", + "description": "Aggregate results from bioinformatics analyses across many samples into a single report.", + "topics": [ + "bioinformatics", + "analysis", + "pypi", + "bioconda", + "multiqc", + "python", + "data-visualization", + "quality-control", + "reporting", + "seqera", + "vizualisation" + ] }, { - "uid": "github/NLeSC/case-law-app", - "url": "https://github.com/NLeSC/case-law-app", - "rel": "/software/repository/github/NLeSC/case-law-app", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "uid": "github/JianjunTan-Beijing/LPI-CSFFR", + "url": "https://github.com/JianjunTan-Beijing/LPI-CSFFR", + "rel": "/software/repository/github/JianjunTan-Beijing/LPI-CSFFR", + "avatar": "https://avatars.githubusercontent.com/u/74161640?v=4", "description": null, - "topics": [] + "topics": [ + "deep-learning", + "rpis", + "rna-protein-interactions", + "cnn", + "serial-feature-fusion", + "keras" + ] }, { - "uid": "github/NLeSC/esibayes", - "url": "https://github.com/NLeSC/esibayes", - "rel": "/software/repository/github/NLeSC/esibayes", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Optimization and state estimation of dynamic models", + "uid": "github/mdlreyes/void-dwarf-analysis", + "url": "https://github.com/mdlreyes/void-dwarf-analysis", + "rel": "/software/repository/github/mdlreyes/void-dwarf-analysis", + "avatar": "https://avatars.githubusercontent.com/u/33469801?v=4", + "description": "Reduction and analysis code used to measure kinematics of void dwarf galaxies", "topics": [] }, { - "uid": "github/NLeSC/ShiCo", - "url": "https://github.com/NLeSC/ShiCo", - "rel": "/software/repository/github/NLeSC/ShiCo", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Netherlands eScience Center - Shifting Concepts Through Time project", + "uid": "github/ulelab/ultraplex", + "url": "https://github.com/ulelab/ultraplex", + "rel": "/software/repository/github/ulelab/ultraplex", + "avatar": "https://avatars.githubusercontent.com/u/5070671?v=4", + "description": "Ultra-fast 5' and 3' demultiplexer", "topics": [] }, { - "uid": "github/NLeSC/boatswain", - "url": "https://github.com/NLeSC/boatswain", - "rel": "/software/repository/github/NLeSC/boatswain", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "A simple build system for docker images", + "uid": "github/childmindresearch/wristpy", + "url": "https://github.com/childmindresearch/wristpy", + "rel": "/software/repository/github/childmindresearch/wristpy", + "avatar": "https://avatars.githubusercontent.com/u/132617703?v=4", + "description": "A Python package for wrist-worn accelerometer data processing.", "topics": [] }, { - "uid": "github/NLeSC/SalientDescriptor-matlab", - "url": "https://github.com/NLeSC/SalientDescriptor-matlab", - "rel": "/software/repository/github/NLeSC/SalientDescriptor-matlab", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", + "uid": "github/childmindresearch/actisleep-tracker", + "url": "https://github.com/childmindresearch/actisleep-tracker", + "rel": "/software/repository/github/childmindresearch/actisleep-tracker", + "avatar": "https://avatars.githubusercontent.com/u/132617703?v=4", + "description": "A webapp for annotating actigraphy data", + "topics": [ + "actigraphy" + ] + }, + { + "uid": "github/apertif/apercal", + "url": "https://github.com/apertif/apercal", + "rel": "/software/repository/github/apertif/apercal", + "avatar": "https://avatars.githubusercontent.com/u/38492619?v=4", "description": null, "topics": [] }, { - "uid": "github/NLeSC/Massive-PotreeConverter", - "url": "https://github.com/NLeSC/Massive-PotreeConverter", - "rel": "/software/repository/github/NLeSC/Massive-PotreeConverter", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Convert massive pointcloud, for example ahn2 (640 Billion points) to potree format.", + "uid": "github/facebookresearch/segment-anything", + "url": "https://github.com/facebookresearch/segment-anything", + "rel": "/software/repository/github/facebookresearch/segment-anything", + "avatar": "https://avatars.githubusercontent.com/u/16943930?v=4", + "description": "The repository provides code for running inference with the SegmentAnything Model (SAM), links for downloading the trained model checkpoints, and example notebooks that show how to use the model.", "topics": [] }, { - "uid": "github/NLeSC/Chemical-Analytics-Platform", - "url": "https://github.com/NLeSC/Chemical-Analytics-Platform", - "rel": "/software/repository/github/NLeSC/Chemical-Analytics-Platform", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Scripts to create chemical analytics platform based on Knime", + "uid": "github/facebookresearch/faiss", + "url": "https://github.com/facebookresearch/faiss", + "rel": "/software/repository/github/facebookresearch/faiss", + "avatar": "https://avatars.githubusercontent.com/u/16943930?v=4", + "description": "A library for efficient similarity search and clustering of dense vectors.", "topics": [] }, { - "uid": "github/NLeSC/fairdatapoint", - "url": "https://github.com/NLeSC/fairdatapoint", - "rel": "/software/repository/github/NLeSC/fairdatapoint", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Provide machine-readable descriptions of your data assets", + "uid": "github/daissi/thesias", + "url": "https://github.com/daissi/thesias", + "rel": "/software/repository/github/daissi/thesias", + "avatar": "https://avatars.githubusercontent.com/u/9595274?v=4", + "description": "THESIAS: Testing Haplotype Effects In Association Studies", "topics": [ - "fair-data", - "metadata", - "dataset-interface", - "restful-api", - "rdf", - "dcat", - "dcmi" + "bioinformatics", + "genomics", + "haplotype", + "association-studies", + "association-analysis", + "java-interface" ] }, { - "uid": "github/NLeSC/hadrianus-scripts", - "url": "https://github.com/NLeSC/hadrianus-scripts", - "rel": "/software/repository/github/NLeSC/hadrianus-scripts", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Scripts used for the Hadrianus project", + "uid": "github/beebdev/HARU", + "url": "https://github.com/beebdev/HARU", + "rel": "/software/repository/github/beebdev/HARU", + "avatar": "https://avatars.githubusercontent.com/u/79354485?v=4", + "description": "Hardware Accelerated Read Until", "topics": [] }, { - "uid": "github/NLeSC/EEG-epilepsy-diagnosis", - "url": "https://github.com/NLeSC/EEG-epilepsy-diagnosis", - "rel": "/software/repository/github/NLeSC/EEG-epilepsy-diagnosis", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Detection of Epilepsy from EEG data (14 channel x 5 minutes)", + "uid": "github/cbg-ethz/LolliPop", + "url": "https://github.com/cbg-ethz/LolliPop", + "rel": "/software/repository/github/cbg-ethz/LolliPop", + "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", + "description": "Deconvolution for Wastewater Genomics", "topics": [] }, { - "uid": "github/NLeSC/ExtJS-DateTime", - "url": "https://github.com/NLeSC/ExtJS-DateTime", - "rel": "/software/repository/github/NLeSC/ExtJS-DateTime", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "DateTime input field for Ext JS", + "uid": "github/cbg-ethz/smallgenomeutilities", + "url": "https://github.com/cbg-ethz/smallgenomeutilities", + "rel": "/software/repository/github/cbg-ethz/smallgenomeutilities", + "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", + "description": "smallgenomeutilities is a collection of Python scripts to convert alignments between different reference genomes.", "topics": [] }, { - "uid": "github/NLeSC/xenon-cli", - "url": "https://github.com/xenon-middleware/xenon-cli", - "rel": "/software/repository/github/NLeSC/xenon-cli", - "avatar": "https://avatars0.githubusercontent.com/u/48052855?v=4", - "description": "Perform files and jobs operations with Xenon library from command line", + "uid": "github/cbg-ethz/V-pipe", + "url": "https://github.com/cbg-ethz/V-pipe", + "rel": "/software/repository/github/cbg-ethz/V-pipe", + "avatar": "https://avatars2.githubusercontent.com/u/12068026?v=4", + "description": "V-pipe is a pipeline designed for analysing NGS data of short viral genomes", "topics": [] }, { - "uid": "github/NLeSC/pattyvis", - "url": "https://github.com/NLeSC/PattyVis", - "rel": "/software/repository/github/NLeSC/pattyvis", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Webgl pointcloud visualization of the Via Appia based on potree", + "uid": "github/cbg-ethz/shorah", + "url": "https://github.com/cbg-ethz/shorah", + "rel": "/software/repository/github/cbg-ethz/shorah", + "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", + "description": "Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)", "topics": [] }, { - "uid": "github/NLeSC/PattyData", - "url": "https://github.com/NLeSC/PattyData", - "rel": "/software/repository/github/NLeSC/PattyData", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": null, + "uid": "github/cbg-ethz/PredictHaplo", + "url": "https://github.com/cbg-ethz/PredictHaplo", + "rel": "/software/repository/github/cbg-ethz/PredictHaplo", + "avatar": "https://avatars2.githubusercontent.com/u/12068026?v=4", + "description": "This software aims at reconstructing haplotypes from next-generation sequencing data.", "topics": [] }, { - "uid": "github/NLeSC/xtas", - "url": "https://github.com/NLeSC/xtas", - "rel": "/software/repository/github/NLeSC/xtas", - "avatar": "https://avatars0.githubusercontent.com/u/1705862?v=4", - "description": "Distributed text analysis suite based on Celery", + "uid": "github/DyHealthNet/NApy", + "url": "https://github.com/DyHealthNet/NApy", + "rel": "/software/repository/github/DyHealthNet/NApy", + "avatar": "https://avatars.githubusercontent.com/u/160876211?v=4", + "description": "NApy: Efficient Statistics in Python for Large-Scale Heterogeneous Data with Enhanced Support for Missing Data", "topics": [] }, { - "uid": "github/NLeSC/litstudy", - "url": "https://github.com/NLeSC/litstudy", - "rel": "/software/repository/github/NLeSC/litstudy", - "avatar": "https://avatars.githubusercontent.com/u/1705862?v=4", - "description": "Using the power of Python and Jupyter notebooks to automate analysis of scientific literature", - "topics": [ - "literature-review", - "literature-search", - "literature-review-tool", - "python", - "jupyter", - "systematic-literature-reviews", - "systematic-reviews", - "bibliographics", - "bibliometric-analysis", - "bibliometric-visualization", - "bibliometrics", - "scientometrics" - ] - }, - { - "uid": "github/dlakaplan/pulsarsurveyscraper", - "url": "https://github.com/dlakaplan/pulsarsurveyscraper", - "rel": "/software/repository/github/dlakaplan/pulsarsurveyscraper", - "avatar": "https://avatars.githubusercontent.com/u/5092062?v=4", - "description": null, + "uid": "github/djgroen/MPWide", + "url": "https://github.com/djgroen/MPWide", + "rel": "/software/repository/github/djgroen/MPWide", + "avatar": "https://avatars.githubusercontent.com/u/4508093?v=4", + "description": "MPWide is a communication library for message passing across wide area networks.", "topics": [] }, { - "uid": "github/Sudaraka88/LDWeaver", - "url": "https://github.com/Sudaraka88/LDWeaver", - "rel": "/software/repository/github/Sudaraka88/LDWeaver", - "avatar": "https://avatars.githubusercontent.com/u/52267971?v=4", - "description": "Genomewide Epistasis Analysis on Bacteria", - "topics": [ - "bioinformatics", - "bacterial-genome-analysis", - "epistasis-analysis", - "linkage-disequilibrium", - "microbial-genomics" - ] + "uid": "github/shaelebrown/TDApplied", + "url": "https://github.com/shaelebrown/TDApplied", + "rel": "/software/repository/github/shaelebrown/TDApplied", + "avatar": "https://avatars.githubusercontent.com/u/56615362?v=4", + "description": "An R package for statistics and machine learning with persistence diagrams", + "topics": [] }, { - "uid": "github/simon-prunet/defringe", - "url": "https://github.com/simon-prunet/defringe", - "rel": "/software/repository/github/simon-prunet/defringe", - "avatar": "https://avatars.githubusercontent.com/u/31455690?v=4", - "description": "CCD infrared image defringing code in python, using cupy for GPU acceleration. Based on matrix completion of noisy matrix with low-rank regularization via nuclear norm.", + "uid": "github/vmmunoza/nuHawkHunter", + "url": "https://github.com/vmmunoza/nuHawkHunter", + "rel": "/software/repository/github/vmmunoza/nuHawkHunter", + "avatar": "https://avatars.githubusercontent.com/u/53861440?v=4", + "description": "Repository with forecast of PBH neutrinos", "topics": [] }, { - "uid": "github/bc3LC/gcamreport", - "url": "https://github.com/bc3LC/gcamreport", - "rel": "/software/repository/github/bc3LC/gcamreport", - "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", - "description": "Package to process GCAM results and standardize the format", + "uid": "github/exobssim/rapoc-public", + "url": "https://github.com/ExObsSim/Rapoc-public", + "rel": "/software/repository/github/exobssim/rapoc-public", + "avatar": "https://avatars.githubusercontent.com/u/68009281?v=4", + "description": "Rapoc uses molecular absorption measurements (i.e. wavelength-dependent opacities) to calculate Rosseland and Planck mean opacities that are commonly used in atmospheric modelling.", "topics": [] }, { - "uid": "github/bc3LC/medusa", - "url": "https://github.com/bc3LC/medusa", - "rel": "/software/repository/github/bc3LC/medusa", - "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", - "description": "R package to develop distributional analyzes (Spain)", + "uid": "github/mivp/encube", + "url": "https://github.com/mivp/encube", + "rel": "/software/repository/github/mivp/encube", + "avatar": "https://avatars.githubusercontent.com/u/6645755?v=4", + "description": "Encube: large-scale comparative visulisation of sets of multidimensional data", "topics": [] }, { - "uid": "github/bc3LC/rhap", - "url": "https://github.com/bc3LC/rhap", - "rel": "/software/repository/github/bc3LC/rhap", - "avatar": "https://avatars.githubusercontent.com/u/113363938?v=4", - "description": "Econometric analysis to analyze health impacts attributable to indoor air pollution", + "uid": "github/openCARP-org/FACILE-RS", + "url": "https://github.com/openCARP-org/FACILE-RS", + "rel": "/software/repository/github/openCARP-org/FACILE-RS", + "avatar": "https://avatars.githubusercontent.com/u/179502374?v=4", + "description": "This repository is a mirror of the main FACILE-RS repository at https://git.opencarp.org/openCARP/FACILE-RS. You can use this mirror to submit pull requests and contribute to the project.", "topics": [] }, { - "uid": "github/copasi/basico", - "url": "https://github.com/copasi/basico", - "rel": "/software/repository/github/copasi/basico", - "avatar": "https://avatars.githubusercontent.com/u/1854399?v=4", - "description": "A simplified python interface to COPASI.", + "uid": "github/UUDigitalHumanitieslab/texcavator", + "url": "https://github.com/UUDigitalHumanitieslab/texcavator", + "rel": "/software/repository/github/UUDigitalHumanitieslab/texcavator", + "avatar": "https://avatars3.githubusercontent.com/u/7656260?v=4", + "description": "Text mining on the Royal Library newspaper corpus", "topics": [ "python", - "copasi" + "django", + "elasticsearch", + "dojo" ] }, { - "uid": "github/copasi/COPASI", - "url": "https://github.com/copasi/COPASI", - "rel": "/software/repository/github/copasi/COPASI", - "avatar": "https://avatars.githubusercontent.com/u/1854399?v=4", - "description": "COPASI is a software application for simulation and analysis of biochemical networks and their dynamics.", - "topics": [ - "copasi", - "simulation", - "modeling", - "systems-biology", - "dynamics", - "chemistry", - "biochemistry", - "kinetics" - ] + "uid": "github/BenitoFar/NestedComBat", + "url": "https://github.com/BenitoFar/NestedComBat", + "rel": "/software/repository/github/BenitoFar/NestedComBat", + "avatar": "https://avatars.githubusercontent.com/u/151839096?v=4", + "description": null, + "topics": [] }, { - "uid": "github/dengzhuo-AI/Real-Fundus", - "url": "https://github.com/dengzhuo-AI/Real-Fundus", - "rel": "/software/repository/github/dengzhuo-AI/Real-Fundus", - "avatar": "https://avatars.githubusercontent.com/u/63216977?v=4", - "description": null, + "uid": "github/abaleato/CARDiAC", + "url": "https://github.com/abaleato/CARDiAC", + "rel": "/software/repository/github/abaleato/CARDiAC", + "avatar": "https://avatars.githubusercontent.com/u/48951377?v=4", + "description": "Code for Anisotropic Redshift Distributions in Angular Clustering", "topics": [] }, { - "uid": "github/tholoien/XDGMM", - "url": "https://github.com/tholoien/XDGMM", - "rel": "/software/repository/github/tholoien/XDGMM", - "avatar": "https://avatars.githubusercontent.com/u/19830410?v=4", - "description": "A wrapper class for the scikit-learn BaseEstimator class that implements both the astroML and Bovy et al. (2011) XDGMM methods.", + "uid": "github/gmarcais/Quorum", + "url": "https://github.com/gmarcais/Quorum", + "rel": "/software/repository/github/gmarcais/Quorum", + "avatar": "https://avatars.githubusercontent.com/u/1108481?v=4", + "description": "QUality Optimized Reads from the University of Maryland", "topics": [] }, { - "uid": "github/tholoien/empiriciSN", - "url": "https://github.com/tholoien/empiriciSN", - "rel": "/software/repository/github/tholoien/empiriciSN", - "avatar": "https://avatars.githubusercontent.com/u/19830410?v=4", - "description": "Generate realistic parameters for a SN given host galaxy observations based on empirical correlations from SN datasets", + "uid": "github/gmarcais/Jellyfish", + "url": "https://github.com/gmarcais/Jellyfish", + "rel": "/software/repository/github/gmarcais/Jellyfish", + "avatar": "https://avatars.githubusercontent.com/u/1108481?v=4", + "description": "A fast multi-threaded k-mer counter", "topics": [] }, { - "uid": "github/stefanhiemer/topoptlab", - "url": "https://github.com/stefanhiemer/topoptlab", - "rel": "/software/repository/github/stefanhiemer/topoptlab", - "avatar": "https://avatars.githubusercontent.com/u/57184890?v=4", - "description": "The project originates from a simple update of the python topology optimization code by Niels Aage and collaborators, but has since developed into a library for toplogy optimization going well beyond the features of the original code.", + "uid": "github/davemlz/eemont", + "url": "https://github.com/davemlz/eemont", + "rel": "/software/repository/github/davemlz/eemont", + "avatar": "https://avatars.githubusercontent.com/u/49817852?v=4", + "description": "A python package that extends Google Earth Engine.", "topics": [ - "finite-elements", - "optimization", - "topology-optimization" + "google-earth-engine", + "earth-engine", + "google", + "remote-sensing", + "gis", + "geographic-information-systems", + "python", + "python3", + "raster", + "satellite-imagery", + "satellite-images" ] }, { - "uid": "github/fmihpc/analysator", - "url": "https://github.com/fmihpc/analysator", - "rel": "/software/repository/github/fmihpc/analysator", - "avatar": "https://avatars.githubusercontent.com/u/6056775?v=4", - "description": "Python based package for analyzing vlsv files produced by Vlasiator", + "uid": "github/bpp/bpp", + "url": "https://github.com/bpp/bpp", + "rel": "/software/repository/github/bpp/bpp", + "avatar": "https://avatars.githubusercontent.com/u/37528284?v=4", + "description": "implements a versatile high-performance version of the BPP software", "topics": [] }, { - "uid": "github/fmihpc/vlasiator", - "url": "https://github.com/fmihpc/vlasiator", - "rel": "/software/repository/github/fmihpc/vlasiator", - "avatar": "https://avatars.githubusercontent.com/u/6056775?v=4", - "description": "Vlasiator - ten letters you can count on", + "uid": "github/trevisanj/PFANT", + "url": "https://github.com/trevisanj/PFANT", + "rel": "/software/repository/github/trevisanj/PFANT", + "avatar": "https://avatars.githubusercontent.com/u/11477764?v=4", + "description": "Stellar Spectral Synthesis code for Astronomy", "topics": [] }, { - "uid": "github/migueldvb/cine", - "url": "https://github.com/migueldvb/cine", - "rel": "/software/repository/github/migueldvb/cine", - "avatar": "https://avatars.githubusercontent.com/u/678759?v=4", - "description": "Calculate infrared pumping rates by solar radiation", + "uid": "github/cadet/CADET-Core", + "url": "https://github.com/cadet/CADET-Core", + "rel": "/software/repository/github/cadet/CADET-Core", + "avatar": "https://avatars.githubusercontent.com/u/68232670?v=4", + "description": "The heart of CADET. A modular, fast, and accurate modeling and simulation framework for biotechnology processes.", "topics": [ - "python", - "astronomy", - "science", - "comets" + "chromatography", + "chromatography-analysis", + "simulator", + "general-rate-model", + "cadet" ] }, { - "uid": "github/metagentools/gbintk", - "url": "https://github.com/metagentools/gbintk", - "rel": "/software/repository/github/metagentools/gbintk", - "avatar": "https://avatars.githubusercontent.com/u/105288780?v=4", - "description": "\ud83c\udf1f\ud83e\uddec GraphBin-Tk: assembly graph-based metagenomic binning toolkit", + "uid": "github/xoopR/set6", + "url": "https://github.com/xoopR/set6", + "rel": "/software/repository/github/xoopR/set6", + "avatar": "https://avatars2.githubusercontent.com/u/62353263?v=4", + "description": "R6 object-oriented interface for mathematical sets.", "topics": [ - "contigs", - "metagenomics", - "metagenomic-binning", - "assembly-graph", - "bioinformatics" + "r", + "sets", + "oop", + "r6", + "intervals" ] }, { - "uid": "github/helonghuangastro/exolyn", - "url": "https://github.com/helonghuangastro/ExoLyn", - "rel": "/software/repository/github/helonghuangastro/exolyn", - "avatar": "https://avatars.githubusercontent.com/u/172606016?v=4", - "description": null, + "uid": "github/LDEO-CREW/Pythonic-DISORT", + "url": "https://github.com/LDEO-CREW/Pythonic-DISORT", + "rel": "/software/repository/github/LDEO-CREW/Pythonic-DISORT", + "avatar": "https://avatars.githubusercontent.com/u/112423107?v=4", + "description": "Discrete Ordinates Solver for the (1D) Radiative Transfer Equation in a single or multi-layer plane-parallel atmosphere. Coded entirely in Python 3. Based on Stamnes' FORTRAN DISORT (see references in the Jupyter Notebook) and has its main features.", + "topics": [ + "atmospheric-modelling", + "discrete-ordinates-method", + "disort", + "python", + "radiative-transfer", + "radiative-transfer-models" + ] + }, + { + "uid": "github/phillippro/pexo", + "url": "https://github.com/phillippro/pexo", + "rel": "/software/repository/github/phillippro/pexo", + "avatar": "https://avatars.githubusercontent.com/u/3751474?v=4", + "description": "a global modeling framework for ns timing, \u03bcas astrometry, and \u03bcm/s radial velocities", "topics": [] }, { - "uid": "github/kemasuda/jnkepler", - "url": "https://github.com/kemasuda/jnkepler", - "rel": "/software/repository/github/kemasuda/jnkepler", - "avatar": "https://avatars.githubusercontent.com/u/30572649?v=4", - "description": "JAX code for modeling nearly-Keplerian orbits", + "uid": "github/phillippro/agatha", + "url": "https://github.com/phillippro/agatha", + "rel": "/software/repository/github/phillippro/agatha", + "avatar": "https://avatars.githubusercontent.com/u/3751474?v=4", + "description": "Disentangling period signals from correlated noise in a periodogram framework", + "topics": [ + "periodogram", + "time-series", + "periodicity", + "data-analysis", + "data-science" + ] + }, + { + "uid": "github/tupui/scipy", + "url": "https://github.com/tupui/scipy", + "rel": "/software/repository/github/tupui/scipy", + "avatar": "https://avatars.githubusercontent.com/u/23188539?v=4", + "description": "Scipy library main repository", "topics": [] }, { - "uid": "github/cmateu/galstreams", - "url": "https://github.com/cmateu/galstreams", - "rel": "/software/repository/github/cmateu/galstreams", - "avatar": "https://avatars.githubusercontent.com/u/4968584?v=4", - "description": "Milky Way Streams Footprint Library and Toolkit for Python", + "uid": "github/klho/FLAM", + "url": "https://github.com/klho/FLAM", + "rel": "/software/repository/github/klho/FLAM", + "avatar": "https://avatars1.githubusercontent.com/u/1369071?v=4", + "description": "Fast linear algebra in MATLAB", "topics": [] }, { - "uid": "github/cmateu/PyMGC3", - "url": "https://github.com/cmateu/PyMGC3", - "rel": "/software/repository/github/cmateu/PyMGC3", - "avatar": "https://avatars.githubusercontent.com/u/4968584?v=4", - "description": "Python toolkit for mGC3 method", + "uid": "github/tlancian/bio_cs", + "url": "https://github.com/tlancian/bio_cs", + "rel": "/software/repository/github/tlancian/bio_cs", + "avatar": "https://avatars.githubusercontent.com/u/31849244?v=4", + "description": "\"Contrast Subgraphs Allow Comparing Homogeneous and Heterogeneous Networks Derived from Omics Data\" - T. Lanciano, A. Savino, F. Porcu, D. Cittaro, F. Bonchi, P. Provero", "topics": [] }, { - "uid": "github/weizhongli/cdhit", - "url": "https://github.com/weizhongli/cdhit", - "rel": "/software/repository/github/weizhongli/cdhit", - "avatar": "https://avatars.githubusercontent.com/u/12239246?v=4", - "description": "clusters and compares protein or nucleotide sequences.", + "uid": "github/realfastvla/rfpipe", + "url": "https://github.com/realfastvla/rfpipe", + "rel": "/software/repository/github/realfastvla/rfpipe", + "avatar": "https://avatars.githubusercontent.com/u/20173956?v=4", + "description": "Fast radio interferometric transient search pipeline", "topics": [ - "clustering", - "clustering-algorithm" + "radio-astronomy", + "python", + "pipeline", + "transients", + "interferometry" ] }, { - "uid": "github/eweitz/ideogram", - "url": "https://github.com/eweitz/ideogram", - "rel": "/software/repository/github/eweitz/ideogram", - "avatar": "https://avatars1.githubusercontent.com/u/1334561?v=4", - "description": "Chromosome visualization for the web", + "uid": "github/realfastvla/realfast", + "url": "https://github.com/realfastvla/realfast", + "rel": "/software/repository/github/realfastvla/realfast", + "avatar": "https://avatars.githubusercontent.com/u/20173956?v=4", + "description": "Real-time interferometric data analysis for the VLA", "topics": [ - "visualization", - "genomics", - "cytogenetics", - "karyotype", - "cancer-genomics", - "comparative-genomics", - "personal-genomics" + "data-analysis", + "cluster", + "radio", + "astronomy", + "transient-astronomy", + "distributed-computing" ] }, { - "uid": "github/skendrew/milkywayproject_triggering", - "url": "https://github.com/skendrew/milkywayproject_triggering", - "rel": "/software/repository/github/skendrew/milkywayproject_triggering", - "avatar": "https://avatars.githubusercontent.com/u/225201?v=4", - "description": "Code to calculate correlation functions for two (astrophysical) catalogue datasets", - "topics": [] + "uid": "github/Ouranosinc/xclim", + "url": "https://github.com/Ouranosinc/xclim", + "rel": "/software/repository/github/Ouranosinc/xclim", + "avatar": "https://avatars.githubusercontent.com/u/1696763?v=4", + "description": "Library of derived climate variables, ie climate indicators, based on xarray. ", + "topics": [ + "climate-analysis", + "climate-science", + "python", + "xarray", + "icclim", + "netcdf4", + "xclim", + "anuclim", + "dask" + ] }, { - "uid": "github/skendrew/midIR_sensitivity", - "url": "https://github.com/skendrew/midIR_sensitivity", - "rel": "/software/repository/github/skendrew/midIR_sensitivity", - "avatar": "https://avatars.githubusercontent.com/u/225201?v=4", - "description": "Code to calculate the sensitivity of a ground-based instrument for astronomy at mid-infrared wavelengths (3-15 micron). Written for the METIS instrument for the E-ELT but easily customisable.", + "uid": "github/openmsi/openmsistream", + "url": "https://github.com/openmsi/openmsistream", + "rel": "/software/repository/github/openmsi/openmsistream", + "avatar": "https://avatars.githubusercontent.com/u/67872608?v=4", + "description": "Materials data streaming applications, written in Python using Apache Kafka, with a focus on deployment in laboratory environments", "topics": [] }, { - "uid": "github/ihrke/pypillometry", - "url": "https://github.com/ihrke/pypillometry", - "rel": "/software/repository/github/ihrke/pypillometry", - "avatar": "https://avatars2.githubusercontent.com/u/1140241?v=4", - "description": "pupillometry with python", + "uid": "github/bayesn/bayesn", + "url": "https://github.com/bayesn/bayesn", + "rel": "/software/repository/github/bayesn/bayesn", + "avatar": "https://avatars.githubusercontent.com/u/89660624?v=4", + "description": "A numpyro implementation of BayeSN, the optical-NIR SED model for type Ia supernovae", "topics": [] }, { - "uid": "github/C0PEP0D/otto", - "url": "https://github.com/C0PEP0D/otto", - "rel": "/software/repository/github/C0PEP0D/otto", - "avatar": "https://avatars.githubusercontent.com/u/83273482?v=4", - "description": "a Python package to simulate, solve and visualize the source-tracking POMDP", - "topics": [ - "pomdp", - "reinforcement-learning", - "olfactory-search", - "source-tracking" - ] - }, - { - "uid": "github/afeinstein20/eleanor", - "url": "https://github.com/afeinstein20/eleanor", - "rel": "/software/repository/github/afeinstein20/eleanor", - "avatar": "https://avatars.githubusercontent.com/u/5041100?v=4", - "description": "A tool for light curve extraction from the TESS FFIs.", + "uid": "github/greendw/AntabGMVA", + "url": "https://github.com/greendw/AntabGMVA", + "rel": "/software/repository/github/greendw/AntabGMVA", + "avatar": "https://avatars.githubusercontent.com/u/93199958?v=4", + "description": "A Python tool for managing GMVA metadata", "topics": [] }, { - "uid": "github/afeinstein20/stella", - "url": "https://github.com/afeinstein20/stella", - "rel": "/software/repository/github/afeinstein20/stella", - "avatar": "https://avatars3.githubusercontent.com/u/5041100?v=4", - "description": "For characterizing flares with convolutional neural networks", + "uid": "github/KeplerGO/kadenza", + "url": "https://github.com/KeplerGO/kadenza", + "rel": "/software/repository/github/KeplerGO/kadenza", + "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", + "description": "Converts raw cadence target data from the Kepler space telescope into astronomer-friendly FITS files.", "topics": [] }, { - "uid": "github/NMBU-Data-Science/RENT", - "url": "https://github.com/NMBU-Data-Science/RENT", - "rel": "/software/repository/github/NMBU-Data-Science/RENT", - "avatar": "https://avatars.githubusercontent.com/u/60933198?v=4", - "description": "Feature selection method based on repeated elastic net.", + "uid": "github/KeplerGO/PyKE", + "url": "https://github.com/KeplerGO/pyke", + "rel": "/software/repository/github/KeplerGO/PyKE", + "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", + "description": "Easy command line tools for Kepler, K2 & TESS data analysis.", "topics": [ - "feature-selection", - "elastic-net", - "ensemble-model", - "binary-classification", - "regression", - "ensemble", - "classification" + "kepler", + "k2", + "tess", + "astrophysics" ] }, { - "uid": "github/ntoles/tristan-mp-pitp", - "url": "https://github.com/ntoles/tristan-mp-pitp", - "rel": "/software/repository/github/ntoles/tristan-mp-pitp", - "avatar": "https://avatars.githubusercontent.com/u/2400148?v=4", - "description": "Particle-in-cell code TRISTAN-MP", + "uid": "github/KeplerGO/k2mosaic", + "url": "https://github.com/KeplerGO/k2mosaic", + "rel": "/software/repository/github/KeplerGO/k2mosaic", + "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", + "description": "Mosaic Target Pixel Files (TPFs) obtained by NASA's Kepler/K2 missions into CCD-sized images and movies.", "topics": [] }, { - "uid": "github/phac-nml/mob-suite", - "url": "https://github.com/phac-nml/mob-suite", - "rel": "/software/repository/github/phac-nml/mob-suite", - "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", - "description": "MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies", - "topics": [ - "plasmids", - "typing", - "clustering", - "assemblies" - ] - }, - { - "uid": "github/phac-nml/biohansel", - "url": "https://github.com/phac-nml/biohansel", - "rel": "/software/repository/github/phac-nml/biohansel", - "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", - "description": "subtype microbial whole-genome sequencing (WGS) data using SNV targeting k-mer subtyping schemes.", + "uid": "github/KeplerGO/K2fov", + "url": "https://github.com/KeplerGO/K2fov", + "rel": "/software/repository/github/KeplerGO/K2fov", + "avatar": "https://avatars.githubusercontent.com/u/13040606?v=4", + "description": "Check whether targets are in the field of view of NASA's K2 space telescope", "topics": [] }, { - "uid": "github/phac-nml/staramr", - "url": "https://github.com/phac-nml/staramr", - "rel": "/software/repository/github/phac-nml/staramr", - "avatar": "https://avatars.githubusercontent.com/u/15620262?v=4", - "description": "Scans genome contigs against the ResFinder, PlasmidFinder, and PointFinder databases.", + "uid": "github/bluesky/bluesky", + "url": "https://github.com/bluesky/bluesky", + "rel": "/software/repository/github/bluesky/bluesky", + "avatar": "https://avatars1.githubusercontent.com/u/47676189?v=4", + "description": "experiment orchestration and data acquisition", "topics": [ - "antimicrobial-resistance", - "genomics", - "bioinformatics" + "python", + "bluesky", + "dataacquisition" ] }, { - "uid": "github/TBLabFJD/VariantCallingFJD", - "url": "https://github.com/TBLabFJD/VariantCallingFJD", - "rel": "/software/repository/github/TBLabFJD/VariantCallingFJD", - "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", + "uid": "github/nathandecaux/labelprop", + "url": "https://github.com/nathandecaux/labelprop", + "rel": "/software/repository/github/nathandecaux/labelprop", + "avatar": "https://avatars.githubusercontent.com/u/50906750?v=4", "description": null, "topics": [] }, { - "uid": "github/TBLabFJD/WHALE", - "url": "https://github.com/TBLabFJD/WHALE", - "rel": "/software/repository/github/TBLabFJD/WHALE", - "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", - "description": "WHALE: (W)orkflow for (H)uman-genome (A)nalysis of (L)ong-read (E)xperiments", - "topics": [] - }, - { - "uid": "github/TBLabFJD/DBofAFs", - "url": "https://github.com/TBLabFJD/DBofAFs", - "rel": "/software/repository/github/TBLabFJD/DBofAFs", - "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", - "description": "Pipeline for database creation of allele frequencies ", + "uid": "github/veg/hivtrace", + "url": "https://github.com/veg/hivtrace", + "rel": "/software/repository/github/veg/hivtrace", + "avatar": "https://avatars.githubusercontent.com/u/1051502?v=4", + "description": null, "topics": [] }, { - "uid": "github/TBLabFJD/PARROT-FJD", - "url": "https://github.com/TBLabFJD/PARROT-FJD", - "rel": "/software/repository/github/TBLabFJD/PARROT-FJD", - "avatar": "https://avatars.githubusercontent.com/u/48798983?v=4", - "description": "(P)ipeline of (A)nalysis and (R)esearch of (R)are diseases (O)ptimized in (T)blab-Fundaci\u00f3n Jim\u00e9nez D\u00edaz. ", + "uid": "github/veg/tn93", + "url": "https://github.com/veg/tn93", + "rel": "/software/repository/github/veg/tn93", + "avatar": "https://avatars.githubusercontent.com/u/1051502?v=4", + "description": "TN93 fast distance calculator", "topics": [] }, { - "uid": "github/GammaCascade/GCascade", - "url": "https://github.com/GammaCascade/GCascade", - "rel": "/software/repository/github/GammaCascade/GCascade", - "avatar": "https://avatars.githubusercontent.com/u/37936611?v=4", - "description": "Gamma-ray propagation package for Wolfram Mathematica", - "topics": [] + "uid": "github/ynop/audiomate", + "url": "https://github.com/ynop/audiomate", + "rel": "/software/repository/github/ynop/audiomate", + "avatar": "https://avatars0.githubusercontent.com/u/5406826?v=4", + "description": "Python library for handling audio datasets.", + "topics": [ + "audio", + "speech-recognition", + "corpus-tools", + "dataset-manager", + "audio-datasets", + "data-loader", + "dataset-filtering", + "dataset-creation", + "speech", + "music", + "noise" + ] }, { - "uid": "github/MintonGroup/swiftest", - "url": "https://github.com/MintonGroup/swiftest", - "rel": "/software/repository/github/MintonGroup/swiftest", - "avatar": "https://avatars.githubusercontent.com/u/160645906?v=4", - "description": "Swiftest is a software packaged designed to model the long-term dynamical dynamics of n-body systems with a dominant central body, like the solar system. ", + "uid": "github/instituteofmechanics/paraqus", + "url": "https://github.com/InstituteOfMechanics/Paraqus", + "rel": "/software/repository/github/instituteofmechanics/paraqus", + "avatar": "https://avatars.githubusercontent.com/u/153821080?v=4", + "description": "An exporter for Abaqus output data to the VTK/VTU file format.", "topics": [] }, { - "uid": "github/giswqs/lidar", - "url": "https://github.com/giswqs/lidar", - "rel": "/software/repository/github/giswqs/lidar", - "avatar": "https://avatars.githubusercontent.com/u/5016453?v=4", - "description": "A Python package for delineating nested surface depressions from digital elevation data.", - "topics": [ - "python", - "lidar", - "digital-elevation-model", - "gis", - "remote-sensing", - "image-processing", - "terrain-analysis", - "hydrological" - ] - }, - { - "uid": "github/giswqs/geemap", - "url": "https://github.com/giswqs/geemap", - "rel": "/software/repository/github/giswqs/geemap", - "avatar": "https://avatars1.githubusercontent.com/u/5016453?v=4", - "description": "A Python package for interactive mapping with Google Earth Engine, ipyleaflet, and ipywidgets", + "uid": "github/floodlight-sports/floodlight", + "url": "https://github.com/floodlight-sports/floodlight", + "rel": "/software/repository/github/floodlight-sports/floodlight", + "avatar": "https://avatars.githubusercontent.com/u/92793483?v=4", + "description": "Python package for streamlined analysis of sports data.", "topics": [ - "google-earth-engine", - "gis", - "remote-sensing", - "image-processing", "python", - "jupyter-notebook", - "ipyleaflet", - "mapping", - "earth-engine" + "sports-analytics", + "sports-stats" ] }, { - "uid": "github/giswqs/leafmap", - "url": "https://github.com/giswqs/leafmap", - "rel": "/software/repository/github/giswqs/leafmap", - "avatar": "https://avatars.githubusercontent.com/u/5016453?v=4", - "description": "A Python package for interactive mapping and geospatial analysis with minimal coding in a Jupyter environment", + "uid": "github/macs3-project/MACS", + "url": "https://github.com/macs3-project/MACS", + "rel": "/software/repository/github/macs3-project/MACS", + "avatar": "https://avatars.githubusercontent.com/u/66320751?v=4", + "description": "MACS -- Model-based Analysis of ChIP-Seq", "topics": [ - "ipyleaflet", - "folium", - "mapping", + "chip-seq", + "atac-seq", + "dnase-seq", + "peak-caller", "python", - "geopython", - "jupyter-notebook", - "jupyter", - "gis", - "dataviz", - "data-science", - "whiteboxtools", - "geospatial", - "geospatial-analysis" - ] - }, - { - "uid": "github/retostauffer/python-colorspace", - "url": "https://github.com/retostauffer/python-colorspace", - "rel": "/software/repository/github/retostauffer/python-colorspace", - "avatar": "https://avatars.githubusercontent.com/u/13628564?v=4", - "description": "Python colorspace implementation. Documentation available on https://retostauffer.github.io/python-colorspace/. The latest release is available via the Python Package Index (PyPI) via https://pypi.org/project/colorspace/", + "poisson-equation", + "macs" + ] + }, + { + "uid": "github/s-abbas/robnptests", + "url": "https://github.com/s-abbas/robnptests", + "rel": "/software/repository/github/s-abbas/robnptests", + "avatar": "https://avatars.githubusercontent.com/u/10209088?v=4", + "description": "Robust two-sample tests for the location problem", "topics": [] }, { - "uid": "github/COSIMA/regional-mom6", - "url": "https://github.com/COSIMA/regional-mom6", - "rel": "/software/repository/github/COSIMA/regional-mom6", - "avatar": "https://avatars.githubusercontent.com/u/12704607?v=4", - "description": "Automatic generation of regional configurations of the Modular Ocean Model 6 (MOM6) in Python", + "uid": "github/eWaterCycle/grpc4bmi", + "url": "https://github.com/eWaterCycle/grpc4bmi", + "rel": "/software/repository/github/eWaterCycle/grpc4bmi", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "gRPC wrapper for model with a Basic modeling interface", "topics": [ - "mom6", - "ocean-modelling", - "python", - "regional-model" + "grpc", + "bmi", + "python" ] }, { - "uid": "github/mirapy-org/mirapy", - "url": "https://github.com/mirapy-org/mirapy", - "rel": "/software/repository/github/mirapy-org/mirapy", - "avatar": "https://avatars.githubusercontent.com/u/49879504?v=4", - "description": "MiraPy: A Python package for Deep Learning in Astronomy", + "uid": "github/eWaterCycle/setup-singularity", + "url": "https://github.com/eWaterCycle/setup-singularity", + "rel": "/software/repository/github/eWaterCycle/setup-singularity", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "GitHub action to setup singularity", + "topics": [] + }, + { + "uid": "github/eWaterCycle/jupyterlab_thredds", + "url": "https://github.com/eWaterCycle/jupyterlab_thredds", + "rel": "/software/repository/github/eWaterCycle/jupyterlab_thredds", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "JupyterLab dataset browser for THREDDS catalog", "topics": [ - "deep-learning", - "astronomy", - "keras", - "machine-learning", - "classification", - "autoencoder", - "curve-fitting", - "ogle", - "htru1", - "x-ray-binaries", - "image-reconstruction", - "variable-stars" + "thredds", + "jupyterlab-extension" ] }, { - "uid": "github/ixkael/QuickSip", - "url": "https://github.com/ixkael/QuickSip", - "rel": "/software/repository/github/ixkael/QuickSip", - "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", - "description": "Pipeline to quickly project Survey Image Properties (e.g. seeing, sky noise, airmass) onto the sky into Healpix maps using flexible weighting schemes. Initially designed to produce maps of observing condition related sources of systematics for the Dark Energy Survey, but will work with any multi-epoch survey and collection of images with valid WCS information.", + "uid": "github/eWaterCycle/Cesium-NcWMS", + "url": "https://github.com/eWaterCycle/Cesium-NcWMS", + "rel": "/software/repository/github/eWaterCycle/Cesium-NcWMS", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "Cesium angular directive with ncwms integration to display netcdf datasets", "topics": [] }, { - "uid": "github/ixkael/Delight", - "url": "https://github.com/ixkael/Delight", - "rel": "/software/repository/github/ixkael/Delight", - "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", - "description": "Photometric redshift via Gaussian processes with physical kernels", + "uid": "github/eWaterCycle/experiment-launcher", + "url": "https://github.com/eWaterCycle/experiment-launcher", + "rel": "/software/repository/github/eWaterCycle/experiment-launcher", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "eWaterCycle Experiment Launcher", "topics": [] }, { - "uid": "github/ixkael/3DEX", - "url": "https://github.com/ixkael/3DEX", - "rel": "/software/repository/github/ixkael/3DEX", - "avatar": "https://avatars.githubusercontent.com/u/229516?v=4", - "description": "3D expansions", + "uid": "github/eWaterCycle/ewatercycle", + "url": "https://github.com/eWaterCycle/ewatercycle", + "rel": "/software/repository/github/eWaterCycle/ewatercycle", + "avatar": "https://avatars.githubusercontent.com/u/12843269?v=4", + "description": "Python utilities for running hydrological models", "topics": [] }, { - "uid": "github/synthpop-galaxy/synthpop", - "url": "https://github.com/synthpop-galaxy/synthpop", - "rel": "/software/repository/github/synthpop-galaxy/synthpop", - "avatar": "https://avatars.githubusercontent.com/u/127166316?v=4", - "description": "A modular Galactic population synthesis code", + "uid": "github/eWaterCycle/eWaterleaf", + "url": "https://github.com/eWaterCycle/eWaterleaf", + "rel": "/software/repository/github/eWaterCycle/eWaterleaf", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "Simple leaflet-based visualization for the eWaterCycle project", "topics": [] }, { - "uid": "github/dalya/WeirdestGalaxies", - "url": "https://github.com/dalya/WeirdestGalaxies", - "rel": "/software/repository/github/dalya/WeirdestGalaxies", - "avatar": "https://avatars.githubusercontent.com/u/3278167?v=4", - "description": "This repository contains the basic outlier detection algorithm that we use to find the weirdest SDSS galaxies.", + "uid": "github/eWaterCycle/setup-grpc", + "url": "https://github.com/eWaterCycle/setup-grpc", + "rel": "/software/repository/github/eWaterCycle/setup-grpc", + "avatar": "https://avatars0.githubusercontent.com/u/12843269?v=4", + "description": "GitHub Action to setup gRPC C++ environment", "topics": [] }, { - "uid": "github/hypre-space/hypredrive", - "url": "https://github.com/hypre-space/hypredrive", - "rel": "/software/repository/github/hypre-space/hypredrive", - "avatar": "https://avatars.githubusercontent.com/u/44828226?v=4", - "description": "High-level interface for solving linear systems with hypre", + "uid": "github/EliseJ/superabc", + "url": "https://github.com/EliseJ/superabc", + "rel": "/software/repository/github/EliseJ/superabc", + "avatar": "https://avatars.githubusercontent.com/u/4825088?v=4", + "description": "superABC: cosmological constraints from SN light curves using Approximate Bayesian Computation", "topics": [] }, { - "uid": "github/nathanael-fijalkow/DeepSynth", - "url": "https://github.com/nathanael-fijalkow/DeepSynth", - "rel": "/software/repository/github/nathanael-fijalkow/DeepSynth", - "avatar": "https://avatars.githubusercontent.com/u/7555483?v=4", - "description": "General-purpose program synthesiser", + "uid": "github/EliseJ/astroABC", + "url": "https://github.com/EliseJ/astroABC", + "rel": "/software/repository/github/EliseJ/astroABC", + "avatar": "https://avatars.githubusercontent.com/u/4825088?v=4", + "description": "Approximate Bayesian Computation Sequential Monte Carlo sampler for parameter estimation.", "topics": [] }, { - "uid": "github/KeckObservatory/tilsotua", - "url": "https://github.com/KeckObservatory/tilsotua", - "rel": "/software/repository/github/KeckObservatory/tilsotua", - "avatar": "https://avatars.githubusercontent.com/u/33301640?v=4", - "description": null, + "uid": "github/jakeret/abcpmc", + "url": "https://github.com/jakeret/abcpmc", + "rel": "/software/repository/github/jakeret/abcpmc", + "avatar": "https://avatars.githubusercontent.com/u/11830719?v=4", + "description": "Approximate Bayesian Computation Population Monte Carlo", "topics": [] }, { - "uid": "github/jarvist/Julia-Phonons", - "url": "https://github.com/jarvist/Julia-Phonons", - "rel": "/software/repository/github/jarvist/Julia-Phonons", - "avatar": "https://avatars.githubusercontent.com/u/82852?v=4", - "description": "Julia codes to play with Phonons", + "uid": "github/jakeret/tf_unet", + "url": "https://github.com/jakeret/tf_unet", + "rel": "/software/repository/github/jakeret/tf_unet", + "avatar": "https://avatars.githubusercontent.com/u/11830719?v=4", + "description": "Generic U-Net Tensorflow implementation for image segmentation", "topics": [ - "phonopy", - "phonons" + "image-segmentation", + "neural-network", + "deep-learning", + "tensorflow" ] }, { - "uid": "github/felixbur/nkululeko", - "url": "https://github.com/felixbur/nkululeko", - "rel": "/software/repository/github/felixbur/nkululeko", - "avatar": "https://avatars.githubusercontent.com/u/2063797?v=4", - "description": "Machine learning speaker characteristics", + "uid": "github/czbiohub/cerebra", + "url": "https://github.com/czbiohub/cerebra", + "rel": "/software/repository/github/czbiohub/cerebra", + "avatar": "https://avatars3.githubusercontent.com/u/28747162?v=4", + "description": "A tool for fast and accurate summarizing of variant calling format (VCF) files", "topics": [ - "speech", - "machine-learning", - "pytorch" + "variant-calling", + "mutations", + "scrna-seq", + "genomics" ] }, - { - "uid": "github/mr-superonion/FPFS", - "url": "https://github.com/mr-superonion/FPFS", - "rel": "/software/repository/github/mr-superonion/FPFS", - "avatar": "https://avatars.githubusercontent.com/u/12228372?v=4", - "description": "A fast, accurate estimator for small shear distortion.", - "topics": [] - }, { "uid": "github/bricoletc/delfies", "url": "https://github.com/bricoletc/delfies", @@ -68789,4778 +68796,4865 @@ "topics": [] }, { - "uid": "github/ptaconet/modisfast", - "url": "https://github.com/ptaconet/modisfast", - "rel": "/software/repository/github/ptaconet/modisfast", - "avatar": "https://avatars.githubusercontent.com/u/15834351?v=4", - "description": "Fast and efficient access to MODIS, VIIRS and GPM Earth Observation data with R ", + "uid": "github/myfang2021/VIPPID", + "url": "https://github.com/myfang2021/VIPPID", + "rel": "/software/repository/github/myfang2021/VIPPID", + "avatar": "https://avatars.githubusercontent.com/u/85163173?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/lantunes/cellpylib", + "url": "https://github.com/lantunes/cellpylib", + "rel": "/software/repository/github/lantunes/cellpylib", + "avatar": "https://avatars.githubusercontent.com/u/788494?v=4", + "description": "A library for working with Cellular Automata, for Python.", "topics": [ - "r", - "data-cube", - "opendap", - "environmental-data", - "earth-science-data", - "gpm", - "land", - "modis", - "viirs", - "nasa", - "precipitation-data", - "temperature-data", - "vegetation-data" + "cellular-automata", + "complexity", + "complex-systems", + "nonlinear-dynamics", + "computation" ] }, { - "uid": "github/ptaconet/bdd_rntaaf", - "url": "https://github.com/ptaconet/bdd_rntaaf", - "rel": "/software/repository/github/ptaconet/bdd_rntaaf", - "avatar": "https://avatars.githubusercontent.com/u/15834351?v=4", - "description": "Codes SQL de la premi\u00e8re base de donn\u00e9es relationelle de la R\u00e9serve Naturelle Nationale des Terres australes fran\u00e7aises", - "topics": [] + "uid": "github/mtsch/Ripserer.jl", + "url": "https://github.com/mtsch/Ripserer.jl", + "rel": "/software/repository/github/mtsch/Ripserer.jl", + "avatar": "https://avatars0.githubusercontent.com/u/7646525?v=4", + "description": "Ripser and Ripserer", + "topics": [ + "persistent-homology", + "topological-data-analysis", + "homology", + "cohomology", + "tda", + "ripser", + "julia", + "topology" + ] }, { - "uid": "github/shahmoradi/grb_world", - "url": "https://github.com/shahmoradi/grb_world", - "rel": "/software/repository/github/shahmoradi/grb_world", - "avatar": "https://avatars.githubusercontent.com/u/4683401?v=4", - "description": "Containing codes for the SGRB and LGRB world models", + "uid": "github/astronomical-data-processing/RAPP", + "url": "https://github.com/astronomical-data-processing/RAPP", + "rel": "/software/repository/github/astronomical-data-processing/RAPP", + "avatar": "https://avatars.githubusercontent.com/u/47811859?v=4", + "description": null, "topics": [] }, { - "uid": "github/Valcin/BE_HaPPy", - "url": "https://github.com/Valcin/BE_HaPPy", - "rel": "/software/repository/github/Valcin/BE_HaPPy", - "avatar": "https://avatars.githubusercontent.com/u/40492877?v=4", - "description": "Bias Emulator for Halo Power Spectrum ", - "topics": [] + "uid": "github/vatlab/sos-notebook", + "url": "https://github.com/vatlab/sos-notebook", + "rel": "/software/repository/github/vatlab/sos-notebook", + "avatar": "https://avatars.githubusercontent.com/u/20074389?v=4", + "description": "Multi-language Jupyter Notebook", + "topics": [ + "jupyter-kernels" + ] }, { - "uid": "github/jonotuke/BREADR", - "url": "https://github.com/jonotuke/BREADR", - "rel": "/software/repository/github/jonotuke/BREADR", - "avatar": "https://avatars.githubusercontent.com/u/1281470?v=4", - "description": null, - "topics": [] + "uid": "github/cgre-aachen/gemgis", + "url": "https://github.com/cgre-aachen/gemgis", + "rel": "/software/repository/github/cgre-aachen/gemgis", + "avatar": "https://avatars.githubusercontent.com/u/29890754?v=4", + "description": "Spatial data processing for geomodeling", + "topics": [ + "spatial-data", + "processing", + "geographic", + "geographic-data", + "vector-data", + "raster-data", + "geomodeling", + "modeling", + "visualization", + "python", + "jupyter", + "jupyter-notebook", + "notebooks", + "geospatial" + ] }, { - "uid": "github/PolymerGuy/recolo", - "url": "https://github.com/PolymerGuy/recolo", - "rel": "/software/repository/github/PolymerGuy/recolo", - "avatar": "https://avatars.githubusercontent.com/u/13745749?v=4", - "description": "Load reconstuction using virtual fields", + "uid": "github/muLAn-project/muLAn", + "url": "https://github.com/muLAn-project/muLAn", + "rel": "/software/repository/github/muLAn-project/muLAn", + "avatar": "https://avatars.githubusercontent.com/u/29952484?v=4", + "description": "muLAn: MICROlensing Analysis software", + "topics": [ + "microlensing", + "modelling", + "astronomy", + "science" + ] + }, + { + "uid": "github/dmey/synthia", + "url": "https://github.com/dmey/synthia", + "rel": "/software/repository/github/dmey/synthia", + "avatar": "https://avatars.githubusercontent.com/u/26348635?v=4", + "description": "\ud83d\udcc8 \ud83d\udc0d Multidimensional synthetic data generation in Python", + "topics": [ + "synthetic-data", + "copula", + "fpca", + "machine-learning", + "data-science", + "data-generation", + "xarray", + "weather", + "climate", + "finance", + "data-modelling", + "principal-component-analysis", + "dependency-analysis", + "dependency-modeling", + "statistics", + "augmentation", + "oversampling", + "data-augmentation", + "functional-data", + "data-generator" + ] + }, + { + "uid": "github/kblin/ncbi-acc-download", + "url": "https://github.com/kblin/ncbi-acc-download", + "rel": "/software/repository/github/kblin/ncbi-acc-download", + "avatar": "https://avatars.githubusercontent.com/u/76448?v=4", + "description": "Download files from NCBI Entrez by accession", "topics": [] }, { - "uid": "github/mbejger/polgraw-allsky", - "url": "https://github.com/mbejger/polgraw-allsky", - "rel": "/software/repository/github/mbejger/polgraw-allsky", - "avatar": "https://avatars.githubusercontent.com/u/514726?v=4", - "description": "All-sky search code (Polgraw group)", + "uid": "github/HillLab/SomaticSiMu", + "url": "https://github.com/HillLab/SomaticSiMu", + "rel": "/software/repository/github/HillLab/SomaticSiMu", + "avatar": "https://avatars.githubusercontent.com/u/69210731?v=4", + "description": "SomaticSiMu generates single and double base pair substitutions, and single base pair insertions and deletions of biologically representative mutation signature probabilities and combinations.", + "topics": [ + "simulation", + "signature", + "mutation" + ] + }, + { + "uid": "github/SMTG-Bham/ThermoParser", + "url": "https://github.com/SMTG-Bham/ThermoParser", + "rel": "/software/repository/github/SMTG-Bham/ThermoParser", + "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", + "description": "A tool for streamlining data analysis and visualisation for thermoelectrics and charge carrier transport in computational materials science.", + "topics": [ + "thermoelectric", + "chemistry", + "physics", + "materials", + "science", + "materials-science", + "plotting", + "tp", + "matplotlib", + "python", + "computational-chemistry", + "computational-materials-science" + ] + }, + { + "uid": "github/SMTG-Bham/doped", + "url": "https://github.com/SMTG-Bham/doped", + "rel": "/software/repository/github/SMTG-Bham/doped", + "avatar": "https://avatars.githubusercontent.com/u/14860406?v=4", + "description": "doped is a Python software for the generation, pre-/post-processing and analysis of defect supercell calculations, implementing the defect simulation workflow in an efficient, reproducible, user-friendly yet powerful and fully-customisable manner.", + "topics": [ + "ab-initio", + "computational-chemistry", + "computational-materials-science", + "defect-formation-energy", + "defects", + "dft", + "doping", + "fermi-level", + "point-defects", + "pymatgen", + "semiconductors", + "vasp", + "defect-calculation", + "defect-levels", + "defect-thermodynamics", + "shakenbreak", + "transition-levels" + ] + }, + { + "uid": "github/cuDisc/cuDisc", + "url": "https://github.com/cuDisc/cuDisc", + "rel": "/software/repository/github/cuDisc/cuDisc", + "avatar": "https://avatars.githubusercontent.com/u/158287095?v=4", + "description": "A CUDA-accelerated 2D code for protoplanetary disc evolution simulations", "topics": [] }, { - "uid": "github/Fenyutanchan/solar-vSI", - "url": "https://github.com/Fenyutanchan/solar-vSI", - "rel": "/software/repository/github/Fenyutanchan/solar-vSI", - "avatar": "https://avatars.githubusercontent.com/u/32387646?v=4", - "description": null, + "uid": "github/heliopython/heliopy", + "url": "https://github.com/heliopython/heliopy", + "rel": "/software/repository/github/heliopython/heliopy", + "avatar": "https://avatars.githubusercontent.com/u/24206439?v=4", + "description": "Python for heliospheric and planetary physics", + "topics": [ + "space-physics", + "python", + "physics" + ] + }, + { + "uid": "github/mtazzari/galario", + "url": "https://github.com/mtazzari/galario", + "rel": "/software/repository/github/mtazzari/galario", + "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", + "description": "Gpu Accelerated Library for Analysing Radio Interferometer Observations", + "topics": [ + "gpu-accelerated-library", + "gpu", + "astronomy", + "interferometry", + "radio", + "radio-astronomy", + "fourier-analysis" + ] + }, + { + "uid": "github/mtazzari/uvplot", + "url": "https://github.com/mtazzari/uvplot", + "rel": "/software/repository/github/mtazzari/uvplot", + "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", + "description": "A simple package to make nice visibility plots and to export visibilites from MS tables", "topics": [] }, { - "uid": "github/GenomePathogenAnalysisService/read-it-and-keep", - "url": "https://github.com/GlobalPathogenAnalysisService/read-it-and-keep", - "rel": "/software/repository/github/GenomePathogenAnalysisService/read-it-and-keep", - "avatar": "https://avatars.githubusercontent.com/u/84399229?v=4", - "description": "Read contamination removal", + "uid": "github/mtazzari/binary", + "url": "https://github.com/mtazzari/binary", + "rel": "/software/repository/github/mtazzari/binary", + "avatar": "https://avatars.githubusercontent.com/u/6020226?v=4", + "description": "This program computes the evolution of an accretion disc interacting with a binary system. Used in Tazzari, Lodato (2015).", "topics": [] }, { - "uid": "github/vimc/vaultr", - "url": "https://github.com/vimc/vaultr", - "rel": "/software/repository/github/vimc/vaultr", - "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", - "description": ":lock: API client for Hashicorp's vault (https://www.vaultproject.io/)", + "uid": "github/LangeLab/SQuAPP", + "url": "https://github.com/LangeLab/SQuAPP", + "rel": "/software/repository/github/LangeLab/SQuAPP", + "avatar": "https://avatars.githubusercontent.com/u/22403445?v=4", + "description": "Shiny App allows streamlined analysis of multiple levels of proteomics data.", + "topics": [ + "shiny", + "proteomics", + "peptidomics", + "interactive-apps", + "data-analysis", + "bioinformatics-tool" + ] + }, + { + "uid": "github/heracles-ec/heracles", + "url": "https://github.com/heracles-ec/heracles", + "rel": "/software/repository/github/heracles-ec/heracles", + "avatar": "https://avatars.githubusercontent.com/u/138018939?v=4", + "description": "Harmonic-space statistics on the sphere", + "topics": [ + "astronomy", + "cosmology", + "python", + "spherical-harmonics", + "healpix", + "large-scale-structure" + ] + }, + { + "uid": "github/mattyowl/fitScalingRelation", + "url": "https://github.com/mattyowl/fitScalingRelation", + "rel": "/software/repository/github/mattyowl/fitScalingRelation", + "avatar": "https://avatars.githubusercontent.com/u/8531799?v=4", + "description": "Code for fitting galaxy cluster scaling relations using MCMC", "topics": [] }, { - "uid": "github/vimc/orderly", - "url": "https://github.com/vimc/orderly", - "rel": "/software/repository/github/vimc/orderly", - "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", - "description": ":hospital::ambulance: Lightweight Reproducible Reporting for R", + "uid": "github/mattyowl/astLib", + "url": "https://github.com/mattyowl/astLib", + "rel": "/software/repository/github/mattyowl/astLib", + "avatar": "https://avatars.githubusercontent.com/u/8531799?v=4", + "description": "A set of python modules for producing simple plots, statistics, common calculations, coordinate conversions, and manipulating FITS images with World Coordinate System (WCS) information.", + "topics": [ + "astronomy-library" + ] + }, + { + "uid": "github/MichaelCretignier/Rassine_public", + "url": "https://github.com/MichaelCretignier/Rassine_public", + "rel": "/software/repository/github/MichaelCretignier/Rassine_public", + "avatar": "https://avatars.githubusercontent.com/u/44569244?v=4", + "description": "RASSINE is a code using alpha shape to normalise 1d spectra", "topics": [] }, { - "uid": "github/vimc/dettl", - "url": "https://github.com/vimc/dettl", - "rel": "/software/repository/github/vimc/dettl", - "avatar": "https://avatars.githubusercontent.com/u/26278316?v=4", - "description": ":bar_chart::shower: Data extract, transform, test and load", + "uid": "github/chembl/EnsembleFlex", + "url": "https://github.com/chembl/EnsembleFlex", + "rel": "/software/repository/github/chembl/EnsembleFlex", + "avatar": "https://avatars.githubusercontent.com/u/3062531?v=4", + "description": "EnsembleFlex - Flexibility Analysis of Structure Ensembles", "topics": [] }, { - "uid": "github/luizfelippesr/galmag", - "url": "https://github.com/luizfelippesr/galmag", - "rel": "/software/repository/github/luizfelippesr/galmag", - "avatar": "https://avatars.githubusercontent.com/u/11710467?v=4", - "description": "GalMag - A Python tool for computing realistic galactic magnetic fields", - "topics": [ - "galactic-magnetic-fields", - "astrophysics", - "mean-field-dynamo", - "python" - ] + "uid": "github/siavash-saki/tesspy", + "url": "https://github.com/siavash-saki/tesspy", + "rel": "/software/repository/github/siavash-saki/tesspy", + "avatar": "https://avatars.githubusercontent.com/u/54578447?v=4", + "description": null, + "topics": [] }, { - "uid": "github/luizfelippesr/magnetizer", - "url": "https://github.com/luizfelippesr/magnetizer", - "rel": "/software/repository/github/luizfelippesr/magnetizer", - "avatar": "https://avatars.githubusercontent.com/u/11710467?v=4", - "description": "Magnetizer - A Fortran code that post-processes the output of a semi-analytic model of galaxy formation and produces a catalogue of galaxies with detailed radial dependent ISM properties, including magnetic fields", + "uid": "github/comprna/reorientexpress", + "url": "https://github.com/comprna/reorientexpress", + "rel": "/software/repository/github/comprna/reorientexpress", + "avatar": "https://avatars0.githubusercontent.com/u/23315864?v=4", + "description": "Transcriptome long-read orientation with Deep Learning", "topics": [ - "astrophysics", - "mean-field-dynamo", - "galaxies", - "interstellar-medium" + "long-read-sequencing", + "nanopore-sequencing", + "deep-learning", + "convolutional-neural-networks", + "multilayer-perceptron-network", + "machine-learning" ] }, { - "uid": "github/iAART/aart", - "url": "https://github.com/iAART/aart", - "rel": "/software/repository/github/iAART/aart", - "avatar": "https://avatars.githubusercontent.com/u/104873899?v=4", - "description": "An adaptive analytical ray-tracing code to study black hole photon rings", - "topics": [] - }, - { - "uid": "github/babinyurii/recan", - "url": "https://github.com/babinyurii/recan", - "rel": "/software/repository/github/babinyurii/recan", - "avatar": "https://avatars.githubusercontent.com/u/28758465?v=4", - "description": "genetic distance plotting for recombination events analysis", + "uid": "github/comprna/SUPPA", + "url": "https://github.com/comprna/SUPPA", + "rel": "/software/repository/github/comprna/SUPPA", + "avatar": "https://avatars.githubusercontent.com/u/23315864?v=4", + "description": " SUPPA2: Fast quantification of differential splicing ", "topics": [ - "virology", - "bioinformatics", - "python", - "genetic-distances", - "dna-recombination", - "alignment", - "recombination-events", - "distance-plots" + "psi-calculation", + "splicing-quantification", + "differential-splicing-analysis", + "transcript-isoform", + "psi-values", + "clustered-events", + "inclusion-level" ] }, { - "uid": "github/CExA-project/ddc", - "url": "https://github.com/CExA-project/ddc", - "rel": "/software/repository/github/CExA-project/ddc", - "avatar": "https://avatars.githubusercontent.com/u/134058568?v=4", - "description": "DDC is a discrete domain computation library.", + "uid": "github/fAndreuzzi/BisPy", + "url": "https://github.com/fAndreuzzi/BisPy", + "rel": "/software/repository/github/fAndreuzzi/BisPy", + "avatar": "https://avatars.githubusercontent.com/u/8464342?v=4", + "description": "BisPy - A bisimulation library for Python.", "topics": [ - "modern-cpp", - "domain-decomposition", - "ddc", - "cpp", - "discretization", - "hpc", - "kokkos" + "bisimulation", + "graph-algorithms", + "graph-theory", + "algorithms" ] }, { - "uid": "github/nickfarrow/GalacticDNSMass", - "url": "https://github.com/nickfarrow/GalacticDNSMass", - "rel": "/software/repository/github/nickfarrow/GalacticDNSMass", - "avatar": "https://avatars.githubusercontent.com/u/24557779?v=4", - "description": "How heavy are Neutron Stars in binary systems within our Galaxy? A demonstration of how bayesian inference and nested sampling allows us to explore the mass distributions of Galactic Double Neutron Star systems.", - "topics": [ - "physics", - "bayesian-inference", - "astrophysics", - "neutron-star" - ] + "uid": "github/IMS-MAXIMS/openMAXIMS", + "url": "https://github.com/IMS-MAXIMS/openMAXIMS", + "rel": "/software/repository/github/IMS-MAXIMS/openMAXIMS", + "avatar": "https://avatars.githubusercontent.com/u/7870089?v=4", + "description": "Home of the openMAXIMS PAS and EPR", + "topics": [] }, { - "uid": "github/PabloMSanAla/fabada", - "url": "https://github.com/PabloMSanAla/fabada", - "rel": "/software/repository/github/PabloMSanAla/fabada", - "avatar": "https://avatars.githubusercontent.com/u/48026860?v=4", - "description": "Fully Adaptive Bayesian Algorithm for Data Analysis (FABADA) is a new approach of noise reduction methods. In this repository is shown the package developed for this new method based on \\citepaper.", + "uid": "github/stefanhiemer/topoptlab", + "url": "https://github.com/stefanhiemer/topoptlab", + "rel": "/software/repository/github/stefanhiemer/topoptlab", + "avatar": "https://avatars.githubusercontent.com/u/57184890?v=4", + "description": "The project originates from a simple update of the python topology optimization code by Niels Aage and collaborators, but has since developed into a library for toplogy optimization going well beyond the features of the original code.", "topics": [ - "python", - "noise-reduction", - "astronomy" + "finite-elements", + "optimization", + "topology-optimization" ] }, { - "uid": "github/cnellington/Contextualized", - "url": "https://github.com/cnellington/Contextualized", - "rel": "/software/repository/github/cnellington/Contextualized", - "avatar": "https://avatars.githubusercontent.com/u/13963825?v=4", - "description": "An SKLearn-style toolbox for estimating and analyzing models, distributions, and functions with context-specific parameters.", + "uid": "github/bwa-mem2/bwa-mem2", + "url": "https://github.com/bwa-mem2/bwa-mem2", + "rel": "/software/repository/github/bwa-mem2/bwa-mem2", + "avatar": "https://avatars.githubusercontent.com/u/43346774?v=4", + "description": "The next version of bwa-mem ", "topics": [ - "machine-learning", - "statistics", "bioinformatics", - "medical-informatics" + "genomics", + "sequence-alignment" ] }, { - "uid": "github/MIC-DKFZ/HD-BET", - "url": "https://github.com/MIC-DKFZ/HD-BET", - "rel": "/software/repository/github/MIC-DKFZ/HD-BET", - "avatar": "https://avatars.githubusercontent.com/u/31731892?v=4", - "description": "MRI brain extraction tool", - "topics": [] - }, - { - "uid": "github/MIC-DKFZ/TractSeg", - "url": "https://github.com/MIC-DKFZ/TractSeg", - "rel": "/software/repository/github/MIC-DKFZ/TractSeg", - "avatar": "https://avatars.githubusercontent.com/u/31731892?v=4", - "description": "Automatic White Matter Bundle Segmentation", + "uid": "github/mattevs24/reyna", + "url": "https://github.com/mattevs24/reyna", + "rel": "/software/repository/github/mattevs24/reyna", + "avatar": "https://avatars.githubusercontent.com/u/99089819?v=4", + "description": "A lightweight polytopal discontinuous Galerkin finite element library.", "topics": [] }, { - "uid": "github/NathanSandford/Chem-I-Calc", - "url": "https://github.com/NathanSandford/Chem-I-Calc", - "rel": "/software/repository/github/NathanSandford/Chem-I-Calc", - "avatar": "https://avatars.githubusercontent.com/u/36717682?v=4", - "description": "Chemical information calculator for resolved stellar spectroscopy", + "uid": "github/simon-prunet/defringe", + "url": "https://github.com/simon-prunet/defringe", + "rel": "/software/repository/github/simon-prunet/defringe", + "avatar": "https://avatars.githubusercontent.com/u/31455690?v=4", + "description": "CCD infrared image defringing code in python, using cupy for GPU acceleration. Based on matrix completion of noisy matrix with low-rank regularization via nuclear norm.", "topics": [] }, { - "uid": "github/glis-glis/loci", - "url": "https://github.com/glis-glis/loci", - "rel": "/software/repository/github/glis-glis/loci", - "avatar": "https://avatars.githubusercontent.com/u/31037208?v=4", - "description": "Smooth Cubic Multivariate Local Interpolations", + "uid": "github/Ecogenomics/GTDBTk", + "url": "https://github.com/Ecogenomics/GTDBTk", + "rel": "/software/repository/github/Ecogenomics/GTDBTk", + "avatar": "https://avatars.githubusercontent.com/u/1404161?v=4", + "description": "GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.", "topics": [ - "c", - "python", - "jupyter-notebook", - "interpolation", - "grid", - "cubic", - "local" + "taxonomy", + "species-assignments", + "phylogenetics", + "archaea", + "bacteria", + "nomenclature", + "bioinformatics", + "metagenomics" ] }, { - "uid": "github/hknd23/idcempy", - "url": "https://github.com/hknd23/idcempy", - "rel": "/software/repository/github/hknd23/idcempy", - "avatar": "https://avatars.githubusercontent.com/u/35204932?v=4", - "description": "Inflated Discrete Choice Models", + "uid": "github/cmoestl/3DCORE", + "url": "https://github.com/cmoestl/3DCORE", + "rel": "/software/repository/github/cmoestl/3DCORE", + "avatar": "https://avatars.githubusercontent.com/u/14162616?v=4", + "description": "3D coronal mass ejection flux rope modeling", "topics": [ - "mixture-model", - "discrete-choice", - "multinomial-logistic-regression", - "ordered-probit-regression" + "heliophysics", + "spaceweather", + "spacephysics", + "solarwind" ] }, { - "uid": "github/pjedge/longshot", - "url": "https://github.com/pjedge/longshot", - "rel": "/software/repository/github/pjedge/longshot", - "avatar": "https://avatars.githubusercontent.com/u/6822632?v=4", - "description": "diploid SNV caller for error-prone reads", + "uid": "github/Gaius-Augustus/BRAKER", + "url": "https://github.com/Gaius-Augustus/BRAKER", + "rel": "/software/repository/github/Gaius-Augustus/BRAKER", + "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", + "description": "BRAKER is a pipeline for fully automated prediction of protein coding gene structures with GeneMark-ES/ET and AUGUSTUS in novel eukaryotic genomes", "topics": [] }, { - "uid": "github/msyazwanfaid/hilalpy", - "url": "https://github.com/msyazwanfaid/hilalpy", - "rel": "/software/repository/github/msyazwanfaid/hilalpy", - "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", - "description": "A package to analyse the data of Moon sighting for lunar crescent visibility criterion", + "uid": "github/Gaius-Augustus/Tiberius", + "url": "https://github.com/Gaius-Augustus/Tiberius", + "rel": "/software/repository/github/Gaius-Augustus/Tiberius", + "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", + "description": "deep learning gene finder", "topics": [] }, { - "uid": "github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", - "url": "https://github.com/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", - "rel": "/software/repository/github/msyazwanfaid/Authentication-Algorithm-for-New-Moon-Visibility-Report", - "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", - "description": "Authentication Algorithm for New Moon Visibility Report", + "uid": "github/Gaius-Augustus/GALBA", + "url": "https://github.com/Gaius-Augustus/GALBA", + "rel": "/software/repository/github/Gaius-Augustus/GALBA", + "avatar": "https://avatars.githubusercontent.com/u/39598608?v=4", + "description": "GALBA is a pipeline for fully automated prediction of protein coding gene structures with AUGUSTUS in novel eukaryotic genomes for the scenario where high quality proteins from a closely related species are available.", "topics": [] }, { - "uid": "github/msyazwanfaid/hilalimagingdataextraction", - "url": "https://github.com/msyazwanfaid/hilalimagingdataextraction", - "rel": "/software/repository/github/msyazwanfaid/hilalimagingdataextraction", - "avatar": "https://avatars.githubusercontent.com/u/34955054?v=4", - "description": "Code to detect the availability of lunar crescent from image", + "uid": "github/raufs/skDER", + "url": "https://github.com/raufs/skDER", + "rel": "/software/repository/github/raufs/skDER", + "avatar": "https://avatars.githubusercontent.com/u/4260723?v=4", + "description": "skDER: efficient & high-resolution dereplication of microbial genomes to select representatives for comparative genomics and metagenomics. ", "topics": [] }, { - "uid": "github/LebeerLab/tidytacos", - "url": "https://github.com/LebeerLab/tidytacos", - "rel": "/software/repository/github/LebeerLab/tidytacos", - "avatar": "https://avatars.githubusercontent.com/u/29303437?v=4", - "description": "Functions to manipulate and visualize microbial community data", + "uid": "github/BDI-pathogens/OpenABM-Covid19-model-paper", + "url": "https://github.com/BDI-pathogens/OpenABM-Covid19-model-paper", + "rel": "/software/repository/github/BDI-pathogens/OpenABM-Covid19-model-paper", + "avatar": "https://avatars.githubusercontent.com/u/16707812?v=4", + "description": "Figures for the paper describing the OpenABM-Covid19 model", + "topics": [] + }, + { + "uid": "github/ejmackrell/tidyproteomics-interactive", + "url": "https://github.com/ejmackrell/tidyproteomics-interactive", + "rel": "/software/repository/github/ejmackrell/tidyproteomics-interactive", + "avatar": "https://avatars.githubusercontent.com/u/32281663?v=4", + "description": "Interactive Shiny application for tidyproteomics", "topics": [ - "microbial-communities", - "microbiome-analysis", - "r", - "tidy", - "visualization" + "proteins", + "data-exploration", + "differential-expression", + "mass-spectrometry", + "ontology-enrichment", + "peptides", + "proteomics", + "shiny", + "shiny-apps" ] }, { - "uid": "github/frank1010111/bluebonnet", - "url": "https://github.com/frank1010111/bluebonnet", - "rel": "/software/repository/github/frank1010111/bluebonnet", - "avatar": "https://avatars.githubusercontent.com/u/4694479?v=4", - "description": "Scaling solutions for production analysis from unconventional oil and gas wells", + "uid": "github/ajwheeler/korg.jl", + "url": "https://github.com/ajwheeler/Korg.jl", + "rel": "/software/repository/github/ajwheeler/korg.jl", + "avatar": "https://avatars.githubusercontent.com/u/711963?v=4", + "description": "1D LTE stellar spectral synthesis in pure Julia", "topics": [] }, { - "uid": "github/frank1010111/pywaterflood", - "url": "https://github.com/frank1010111/pywaterflood", - "rel": "/software/repository/github/frank1010111/pywaterflood", - "avatar": "https://avatars.githubusercontent.com/u/4694479?v=4", - "description": "Capacitance resistance models for waterflood connectivity", - "topics": [ - "python", - "petroleum-engineering", - "reservoir", - "rust" - ] + "uid": "github/AndreaCaldiroli/ATES-Code", + "url": "https://github.com/AndreaCaldiroli/ATES-Code", + "rel": "/software/repository/github/AndreaCaldiroli/ATES-Code", + "avatar": "https://avatars.githubusercontent.com/u/77735945?v=4", + "description": "The ATES hydrodynamics code computes the temperature, density, velocity and ionization fraction profiles of highly irradiated planetary atmospheres, along with the current, steady-state mass loss rate. ATES solves the one-dimensional Euler, mass and energy conservation equations in radial coordinates through a finite-volume scheme. The hydrodynamics module is paired with a photoionization equilibrium solver that includes cooling via bremsstrahlung, recombination and collisional excitation/ionization for the case of an atmosphere of primordial composition (i.e., pure atomic hydrogen-helium), while also accounting for advection of the different ion species.", + "topics": [] }, { - "uid": "github/zachetienne/nrpytutorial", - "url": "https://github.com/zachetienne/nrpytutorial", - "rel": "/software/repository/github/zachetienne/nrpytutorial", - "avatar": "https://avatars.githubusercontent.com/u/23526265?v=4", - "description": "NRPy+, BlackHoles@Home, SENRv2, and the NRPy+ Jupyter Tutorial: Python-Based Code Generation for Numerical Relativity... and Beyond!", + "uid": "github/BioGenies/AMPBenchmark", + "url": "https://github.com/BioGenies/AMPBenchmark", + "rel": "/software/repository/github/BioGenies/AMPBenchmark", + "avatar": "https://avatars.githubusercontent.com/u/70942725?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/elliohow/fMRI_ROI_Analysis_Tool", + "url": "https://github.com/elliohow/fMRI_ROI_Analysis_Tool", + "rel": "/software/repository/github/elliohow/fMRI_ROI_Analysis_Tool", + "avatar": "https://avatars.githubusercontent.com/u/47447365?v=4", + "description": "An analysis tool that uses per-voxel statistical maps in conjunction with FSL atlases to create per-region statistical maps. Current usage includes the creation of regional maps of temporal signal to noise ratio.", "topics": [ - "automatic", - "code", - "generation", - "bssn", - "covariant", - "hyperbolic", - "pdes", + "fmri", + "fmri-preprocessing", "python", - "sympy", - "numerical", - "relativity", - "general", - "adm", - "codegen", - "nrpy" + "neuroimaging", + "brain-imaging", + "fmri-roi-analysis" ] }, { - "uid": "github/ComputationalRegulatoryGenomicsICL/TFBS", - "url": "https://github.com/ComputationalRegulatoryGenomicsICL/TFBS", - "rel": "/software/repository/github/ComputationalRegulatoryGenomicsICL/TFBS", - "avatar": "https://avatars.githubusercontent.com/u/1623799?v=4", - "description": "TFBS perl module", + "uid": "github/chaoliu-cl/textAnnotatoR", + "url": "https://github.com/chaoliu-cl/textAnnotatoR", + "rel": "/software/repository/github/chaoliu-cl/textAnnotatoR", + "avatar": "https://avatars.githubusercontent.com/u/99229010?v=4", + "description": "Interactive Text Annotation Tool with Shiny GUI", "topics": [] }, { - "uid": "github/YonghuiDong/RawHummus", - "url": "https://github.com/YonghuiDong/RawHummus", - "rel": "/software/repository/github/YonghuiDong/RawHummus", - "avatar": "https://avatars.githubusercontent.com/u/22663189?v=4", - "description": "QC Check Tool for Metabolomics", - "topics": [ - "metabolomics", - "lcms", - "orbitrap", - "quality-control" - ] + "uid": "github/cau-se/ARCHES-PiCar-X", + "url": "https://github.com/cau-se/ARCHES-PiCar-X", + "rel": "/software/repository/github/cau-se/ARCHES-PiCar-X", + "avatar": "https://avatars.githubusercontent.com/u/41943984?v=4", + "description": "Software for digital twin research", + "topics": [] }, { - "uid": "github/tsfloss/DensityFieldTools", - "url": "https://github.com/tsfloss/DensityFieldTools", - "rel": "/software/repository/github/tsfloss/DensityFieldTools", - "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", - "description": "Tools for manipulating density fields and measuring power spectra and bispectra", + "uid": "github/Exo-MerCat/Exo-MerCat", + "url": "https://github.com/Exo-MerCat/Exo-MerCat", + "rel": "/software/repository/github/Exo-MerCat/Exo-MerCat", + "avatar": "https://avatars.githubusercontent.com/u/116747501?v=4", + "description": "Exoplanet Merged Catalog", "topics": [] }, { - "uid": "github/tsfloss/URecon", - "url": "https://github.com/tsfloss/URecon", - "rel": "/software/repository/github/tsfloss/URecon", - "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", - "description": "U-Net Architecture to reconstruct the initial conditions of N-Body simulations", + "uid": "github/LQYoLH/CnnCrispr", + "url": "https://github.com/LQYoLH/CnnCrispr", + "rel": "/software/repository/github/LQYoLH/CnnCrispr", + "avatar": "https://avatars.githubusercontent.com/u/58096958?v=4", + "description": "A deep learning method for sgRNA off-target propensity prediction.", "topics": [] }, { - "uid": "github/tsfloss/BFast", - "url": "https://github.com/tsfloss/BFast", - "rel": "/software/repository/github/tsfloss/BFast", - "avatar": "https://avatars.githubusercontent.com/u/61275325?v=4", - "description": "A fast GPU based bispectrum estimator implemented using JAX", + "uid": "github/poldracklab/nitransforms", + "url": "https://github.com/poldracklab/nitransforms", + "rel": "/software/repository/github/poldracklab/nitransforms", + "avatar": "https://avatars.githubusercontent.com/u/9287954?v=4", + "description": "a standalone fork of nipy/nibabel#656", "topics": [] }, { - "uid": "github/rabix/cwl-format", - "url": "https://github.com/rabix/cwl-format", - "rel": "/software/repository/github/rabix/cwl-format", - "avatar": "https://avatars.githubusercontent.com/u/7840207?v=4", - "description": "A very opinionated code formatter for CWL", + "uid": "github/poldracklab/mriqc", + "url": "https://github.com/nipreps/mriqc", + "rel": "/software/repository/github/poldracklab/mriqc", + "avatar": "https://avatars.githubusercontent.com/u/48300745?v=4", + "description": "Automated Quality Control and visual reports for Quality Assessment of structural (T1w, T2w) and functional MRI of the brain", "topics": [ - "cwl", - "code-formatter", - "common-workflow-language" + "mri", + "quality-control", + "quality-reporter", + "machine-learning", + "neuroimaging" ] }, { - "uid": "github/GiMattia/PyPLUTO", - "url": "https://github.com/GiMattia/PyPLUTO", - "rel": "/software/repository/github/GiMattia/PyPLUTO", - "avatar": "https://avatars.githubusercontent.com/u/95360639?v=4", - "description": "A data analysis Python package for the PLUTO code", + "uid": "github/tacazares/SeedMatchR", + "url": "https://github.com/tacazares/SeedMatchR", + "rel": "/software/repository/github/tacazares/SeedMatchR", + "avatar": "https://avatars.githubusercontent.com/u/31480706?v=4", + "description": "Off-target analysis of siRNA knock down paired with RNAseq", "topics": [ - "python", - "visualization" + "deseq2-analysis", + "mirna", + "rna-seq", + "sirna", + "transcriptomics" ] }, { - "uid": "github/thelfer/MFrontGallery", - "url": "https://github.com/thelfer/MFrontGallery", - "rel": "/software/repository/github/thelfer/MFrontGallery", - "avatar": "https://avatars.githubusercontent.com/u/13975528?v=4", - "description": "This project shows how to create a compilation project for MFront properties, behaviours and models", + "uid": "github/wadpac/GGIR", + "url": "https://github.com/wadpac/GGIR", + "rel": "/software/repository/github/wadpac/GGIR", + "avatar": "https://avatars0.githubusercontent.com/u/27425925?v=4", + "description": "Code corresponding to R package GGIR", + "topics": [] + }, + { + "uid": "github/Merck/pkglite", + "url": "https://github.com/Merck/pkglite", + "rel": "/software/repository/github/Merck/pkglite", + "avatar": "https://avatars.githubusercontent.com/u/7306189?v=4", + "description": "Compact Package Representations", "topics": [ - "heat-transfer", - "material-properties", - "solid-mechanics", - "material-knowledge-management", - "mfront" + "package", + "r", + "packaging-tool", + "ectd" ] }, { - "uid": "github/thelfer/mfem-mgis", - "url": "https://github.com/thelfer/mfem-mgis", - "rel": "/software/repository/github/thelfer/mfem-mgis", - "avatar": "https://avatars.githubusercontent.com/u/13975528?v=4", - "description": "Couple MFEM and MGIS", - "topics": [] + "uid": "github/Merck/BioPhi", + "url": "https://github.com/Merck/BioPhi", + "rel": "/software/repository/github/Merck/BioPhi", + "avatar": "https://avatars.githubusercontent.com/u/7306189?v=4", + "description": "BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluation (OASis) and an interface for computer-assisted antibody sequence design.", + "topics": [ + "antibody", + "humanization", + "humanness", + "sapiens", + "oasis" + ] }, { - "uid": "github/statdivlab/rigr", - "url": "https://github.com/statdivlab/rigr", - "rel": "/software/repository/github/statdivlab/rigr", - "avatar": "https://avatars.githubusercontent.com/u/42418432?v=4", - "description": "Regression, Inference, and General Data Analysis Tools for R ", + "uid": "github/3d-pli/fastpli", + "url": "https://github.com/3d-pli/fastpli", + "rel": "/software/repository/github/3d-pli/fastpli", + "avatar": "https://avatars.githubusercontent.com/u/51479655?v=4", + "description": "Fiber Architecture Simulation Toolbox for 3D Polarized Light Imaging", "topics": [] }, { - "uid": "github/dfki-ric/movement_primitives", - "url": "https://github.com/dfki-ric/movement_primitives", - "rel": "/software/repository/github/dfki-ric/movement_primitives", - "avatar": "https://avatars.githubusercontent.com/u/37366708?v=4", - "description": "Dynamical movement primitives (DMPs), probabilistic movement primitives (ProMPs), and spatially coupled bimanual DMPs for imitation learning.", + "uid": "github/cupy/cupy", + "url": "https://github.com/cupy/cupy", + "rel": "/software/repository/github/cupy/cupy", + "avatar": "https://avatars2.githubusercontent.com/u/23187665?v=4", + "description": "NumPy-like API accelerated with CUDA", "topics": [ + "cuda", + "cudnn", + "cublas", + "cusolver", + "nccl", "python", - "robotics" + "numpy", + "cupy", + "curand", + "cusparse", + "gpu", + "cutensor", + "scipy", + "nvtx", + "nvrtc" ] }, { - "uid": "github/devnums/pyheartlib", - "url": "https://github.com/devnums/pyheartlib", - "rel": "/software/repository/github/devnums/pyheartlib", - "avatar": "https://avatars.githubusercontent.com/u/12469296?v=4", - "description": "A Python package for processing electrocardiogram signals \u2764\ufe0f", + "uid": "github/APGG-Lab/APGG", + "url": "https://github.com/APGG-Lab/APGG", + "rel": "/software/repository/github/APGG-Lab/APGG", + "avatar": "https://avatars.githubusercontent.com/u/81275407?v=4", + "description": "A Modular Toolkit for Public Goods Game Computation", "topics": [ - "ecg", - "electrocardiogram", - "machine-learning" + "genetic-algorithm", + "genetic-programming", + "public-goods-game" ] }, { - "uid": "github/huchiayu/ParticleGridMapper.jl", - "url": "https://github.com/huchiayu/ParticleGridMapper.jl", - "rel": "/software/repository/github/huchiayu/ParticleGridMapper.jl", - "avatar": "https://avatars.githubusercontent.com/u/23061774?v=4", - "description": null, - "topics": [] + "uid": "github/SunilAnandatheertha/PXO", + "url": "https://github.com/SunilAnandatheertha/PXO", + "rel": "/software/repository/github/SunilAnandatheertha/PXO", + "avatar": "https://avatars.githubusercontent.com/u/66170566?v=4", + "description": "PXO (Poly-XTAL Operations). Generate, analyze and export complex 2D space partitions like metallic grain structures", + "topics": [ + "crystallographic-texture", + "grain-structure", + "grains", + "grain-boundaries", + "poly-crystal", + "particle-limited-grain-growth", + "ising-model", + "potts-model", + "monte-carlo-simulations", + "crystallographic-orientations", + "texture" + ] }, { - "uid": "github/simonsobs/so_noise_models", - "url": "https://github.com/simonsobs/so_noise_models", - "rel": "/software/repository/github/simonsobs/so_noise_models", - "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", - "description": "Simons Observatory N(ell) noise models for public release", + "uid": "github/gevaertlab/DUNE", + "url": "https://github.com/gevaertlab/DUNE", + "rel": "/software/repository/github/gevaertlab/DUNE", + "avatar": "https://avatars.githubusercontent.com/u/37343740?v=4", + "description": "DUNE", "topics": [] }, { - "uid": "github/simonsobs/hmvec", - "url": "https://github.com/simonsobs/hmvec", - "rel": "/software/repository/github/simonsobs/hmvec", - "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", - "description": "Vectorized halo model code written entirely in pure Python / numpy ", + "uid": "github/dipto4/falcon_dm", + "url": "https://github.com/dipto4/falcon_dm", + "rel": "/software/repository/github/dipto4/falcon_dm", + "avatar": "https://avatars.githubusercontent.com/u/8073870?v=4", + "description": "Codebase for Falcon-DM: N-body code specifically tuned for simulating intermediate mass ratio inspirals in DM spikes. ", "topics": [] }, { - "uid": "github/simonsobs/nemo", - "url": "https://github.com/simonsobs/nemo", - "rel": "/software/repository/github/simonsobs/nemo", - "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", - "description": "Millimeter-wave map filtering and Sunyaev-Zel'dovich galaxy cluster/source detection package. Originally developed for the Atacama Cosmology Telescope project.", + "uid": "github/ruiying-ocean/cgeniepy", + "url": "https://github.com/ruiying-ocean/cgeniepy", + "rel": "/software/repository/github/ruiying-ocean/cgeniepy", + "avatar": "https://avatars.githubusercontent.com/u/38958822?v=4", + "description": "A Python package for analysing the cGENIE model output", "topics": [ - "astrophysics", - "python" + "cgenie", + "earth-system-model", + "python", + "earth-sciences", + "oceanography", + "visualisation" ] }, { - "uid": "github/simonsobs/mnms", - "url": "https://github.com/simonsobs/mnms", - "rel": "/software/repository/github/simonsobs/mnms", - "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", - "description": "Generate map-based noise models and noise simulations.", + "uid": "github/seshnadathur/Revolver", + "url": "https://github.com/seshnadathur/Revolver", + "rel": "/software/repository/github/seshnadathur/Revolver", + "avatar": "https://avatars.githubusercontent.com/u/39797132?v=4", + "description": "Real-space void locations from survey reconstruction", "topics": [] }, { - "uid": "github/simonsobs/pixell", - "url": "https://github.com/simonsobs/pixell", - "rel": "/software/repository/github/simonsobs/pixell", - "avatar": "https://avatars.githubusercontent.com/u/22817890?v=4", - "description": "A rectangular pixel map manipulation and harmonic analysis library derived from Sigurd Naess' enlib.", - "topics": [ - "cosmology", - "image-processing", - "astrophysics" - ] - }, - { - "uid": "github/danielapai/bioverse", - "url": "https://github.com/danielapai/bioverse", - "rel": "/software/repository/github/danielapai/bioverse", - "avatar": "https://avatars.githubusercontent.com/u/16784174?v=4", - "description": "A simulation framework to assess the statistical power of future biosignature surveys", + "uid": "github/mgckind/SparsePz", + "url": "https://github.com/mgckind/SparsePz", + "rel": "/software/repository/github/mgckind/SparsePz", + "avatar": "https://avatars.githubusercontent.com/u/6931913?v=4", + "description": "Sparse Representation of Photometric Redshift PDFs", "topics": [] }, { - "uid": "github/warrickball/tomso", - "url": "https://github.com/warrickball/tomso", - "rel": "/software/repository/github/warrickball/tomso", - "avatar": "https://avatars.githubusercontent.com/u/20858744?v=4", - "description": "TOMSO (Tools for Models of Stars and their Oscillations) is a set of Python modules for loading and saving input and output files for and from stellar evolution and oscillation codes.", - "topics": [] + "uid": "github/mgckind/easyaccess", + "url": "https://github.com/mgckind/easyaccess", + "rel": "/software/repository/github/mgckind/easyaccess", + "avatar": "https://avatars.githubusercontent.com/u/6931913?v=4", + "description": "SQL command line interpreter for astronomical surveys", + "topics": [ + "python", + "sql-query", + "astronomy", + "interpreter" + ] }, { - "uid": "github/mudit-jain90/i-SPin", - "url": "https://github.com/mudit-jain90/i-SPin", - "rel": "/software/repository/github/mudit-jain90/i-SPin", - "avatar": "https://avatars.githubusercontent.com/u/84209375?v=4", - "description": "A code to simulate multi-component Schrodinger systems (with/without gravity + with/without self interactions) obeying SO(n) symmetry", + "uid": "github/noraeisner/LATTE", + "url": "https://github.com/noraeisner/LATTE", + "rel": "/software/repository/github/noraeisner/LATTE", + "avatar": "https://avatars.githubusercontent.com/u/43934902?v=4", + "description": "Lightcurve Analysis Tool for Transiting Exoplanet", "topics": [] }, { - "uid": "github/sfschen/velocileptors", - "url": "https://github.com/sfschen/velocileptors", - "rel": "/software/repository/github/sfschen/velocileptors", - "avatar": "https://avatars.githubusercontent.com/u/8505965?v=4", - "description": "A code for velocity-based Lagrangian and Eulerian PT expansions of redshift-space distortions.", + "uid": "github/avapolzin/spike", + "url": "https://github.com/avapolzin/spike", + "rel": "/software/repository/github/avapolzin/spike", + "avatar": "https://avatars.githubusercontent.com/u/29441772?v=4", + "description": "All-in-one tool to generate, and correctly drizzle, HST, JWST, and Roman PSFs.", "topics": [] }, { - "uid": "github/sfschen/spinosaurus", - "url": "https://github.com/sfschen/spinosaurus", - "rel": "/software/repository/github/sfschen/spinosaurus", - "avatar": "https://avatars.githubusercontent.com/u/8505965?v=4", + "uid": "github/RamanLab/iCOMIC", + "url": "https://github.com/RamanLab/iCOMIC", + "rel": "/software/repository/github/RamanLab/iCOMIC", + "avatar": "https://avatars.githubusercontent.com/u/10651827?v=4", "description": null, "topics": [] }, { - "uid": "github/HEAP-EXPOSOME/metagenomics-ML", - "url": "https://github.com/HEAP-EXPOSOME/metagenomics-ML", - "rel": "/software/repository/github/HEAP-EXPOSOME/metagenomics-ML", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "ML-based sequence classification pipeline", - "topics": [] + "uid": "github/mrirecon/bart", + "url": "https://github.com/mrirecon/bart", + "rel": "/software/repository/github/mrirecon/bart", + "avatar": "https://avatars.githubusercontent.com/u/15148060?v=4", + "description": "BART: Toolbox for Computational Magnetic Resonance Imaging", + "topics": [ + "computational-imaging", + "mri", + "iterative-methods", + "compressed-sensing", + "bart-toolbox", + "deep-learning" + ] }, { - "uid": "github/HEAP-EXPOSOME/biopipe", - "url": "https://github.com/HEAP-EXPOSOME/biopipe", - "rel": "/software/repository/github/HEAP-EXPOSOME/biopipe", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "Taxonomy classification pipeline (bacteria, virus, fungi)", - "topics": [] + "uid": "github/mrirecon/view", + "url": "https://github.com/mrirecon/view", + "rel": "/software/repository/github/mrirecon/view", + "avatar": "https://avatars.githubusercontent.com/u/15148060?v=4", + "description": "Image Viewer for BART", + "topics": [ + "image-viewer", + "bart-toolbox" + ] }, { - "uid": "github/HEAP-EXPOSOME/ConsumerData", - "url": "https://github.com/HEAP-EXPOSOME/ConsumerData", - "rel": "/software/repository/github/HEAP-EXPOSOME/ConsumerData", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "Pipeline for ConsumerData", - "topics": [] + "uid": "github/shenwei356/unikmer", + "url": "https://github.com/shenwei356/unikmer", + "rel": "/software/repository/github/shenwei356/unikmer", + "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", + "description": "Toolkit for k-mer with taxonomic information", + "topics": [ + "kmer", + "golang", + "unique", + "union", + "intersection", + "difference", + "unik", + "k-mer", + "set" + ] }, { - "uid": "github/HEAP-EXPOSOME/streaming-demo", - "url": "https://github.com/HEAP-EXPOSOME/streaming-demo", - "rel": "/software/repository/github/HEAP-EXPOSOME/streaming-demo", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "Streaming tutorial notebooks for PPG data ", - "topics": [] + "uid": "github/shenwei356/kmcp", + "url": "https://github.com/shenwei356/kmcp", + "rel": "/software/repository/github/shenwei356/kmcp", + "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", + "description": "Accurate metagenomic profiling && Fast large-scale sequence/genome searching", + "topics": [ + "kmer", + "sketch", + "searching", + "metagenomics", + "taxonomic-classification", + "taxonomic-profiling", + "scaled-minhash", + "syncmers", + "cobs", + "sketching", + "bigsi", + "fracminhash", + "virome" + ] }, { - "uid": "github/HEAP-EXPOSOME/exposome-demo", - "url": "https://github.com/HEAP-EXPOSOME/exposome-demo", - "rel": "/software/repository/github/HEAP-EXPOSOME/exposome-demo", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "chemical exposome pipeline demo using docker", - "topics": [] + "uid": "github/shenwei356/csvtk", + "url": "https://github.com/shenwei356/csvtk", + "rel": "/software/repository/github/shenwei356/csvtk", + "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", + "description": "a set of tools for manipulation of CSV/TSV files. It is convenient for rapid data investigation and integration into analysis pipelines.", + "topics": [ + "csv", + "tsv", + "cross-platform", + "golang", + "toolkit", + "bioinformatics", + "command-line", + "tool" + ] }, { - "uid": "github/HEAP-EXPOSOME/hopsworks-chef", - "url": "https://github.com/HEAP-EXPOSOME/hopsworks-chef", - "rel": "/software/repository/github/HEAP-EXPOSOME/hopsworks-chef", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "Chef Cookbook for Hopsworks ", - "topics": [] + "uid": "github/shenwei356/seqkit", + "url": "https://github.com/shenwei356/seqkit", + "rel": "/software/repository/github/shenwei356/seqkit", + "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", + "description": "A cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang", + "topics": [ + "bioinformatics", + "cross-platform", + "fasta", + "golang", + "sequence", + "toolkit", + "fastq", + "tool", + "manipulation" + ] }, { - "uid": "github/HEAP-EXPOSOME/KITE", - "url": "https://github.com/HEAP-EXPOSOME/KITE", - "rel": "/software/repository/github/HEAP-EXPOSOME/KITE", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "KITE: K-mer Index Tversky Estimator application", - "topics": [] + "uid": "github/shenwei356/LexicMap", + "url": "https://github.com/shenwei356/LexicMap", + "rel": "/software/repository/github/shenwei356/LexicMap", + "avatar": "https://avatars.githubusercontent.com/u/2655946?v=4", + "description": "LexicMap: efficient sequence alignment against millions of prokaryotic genomes", + "topics": [ + "prokaryotic-genomes", + "sequence-alignment", + "sequence-search", + "alignment", + "large-scale-dataset", + "microbial-genomes", + "bacterial-database", + "bacterial-genomes", + "lexichash" + ] }, { - "uid": "github/HEAP-EXPOSOME/HPV-KITE", - "url": "https://github.com/HEAP-EXPOSOME/HPV-KITE", - "rel": "/software/repository/github/HEAP-EXPOSOME/HPV-KITE", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "HPV-Kite: HPV K-mer Index Tversky Estimator application", + "uid": "github/autotwin/automesh", + "url": "https://github.com/autotwin/automesh", + "rel": "/software/repository/github/autotwin/automesh", + "avatar": "https://avatars.githubusercontent.com/u/110108019?v=4", + "description": "Automatic mesh generation.", "topics": [] }, { - "uid": "github/HEAP-EXPOSOME/HPV-meta", - "url": "https://github.com/HEAP-EXPOSOME/HPV-meta", - "rel": "/software/repository/github/HEAP-EXPOSOME/HPV-meta", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", + "uid": "github/JoschaJ/mockFRBhosts", + "url": "https://github.com/JoschaJ/mockFRBhosts", + "rel": "/software/repository/github/JoschaJ/mockFRBhosts", + "avatar": "https://avatars.githubusercontent.com/u/49990506?v=4", "description": null, "topics": [] }, { - "uid": "github/HEAP-EXPOSOME/hopsworks", - "url": "https://github.com/HEAP-EXPOSOME/hopsworks", - "rel": "/software/repository/github/HEAP-EXPOSOME/hopsworks", - "avatar": "https://avatars.githubusercontent.com/u/86734080?v=4", - "description": "Hopsworks - Data-Intensive AI platform with a Feature Store", + "uid": "github/biofold/ddgun", + "url": "https://github.com/biofold/ddgun", + "rel": "/software/repository/github/biofold/ddgun", + "avatar": "https://avatars.githubusercontent.com/u/15142086?v=4", + "description": "predict stability change upon mutation", "topics": [] }, { - "uid": "github/desResLab/LINFA", - "url": "https://github.com/desResLab/LINFA", - "rel": "/software/repository/github/desResLab/LINFA", - "avatar": "https://avatars.githubusercontent.com/u/39108751?v=4", - "description": "A Python library for variational inference with normalizing flow and annealing", - "topics": [ - "annealing", - "normalizing-flows", - "variational-inference", - "computational-expensive-models" - ] - }, - { - "uid": "github/CNuge/BOLD-CLI", - "url": "https://github.com/CNuge/BOLD-CLI", - "rel": "/software/repository/github/CNuge/BOLD-CLI", - "avatar": "https://avatars.githubusercontent.com/u/17327173?v=4", - "description": "Command line interface for the retrieval of data from http://www.boldsystems.org", + "uid": "github/biofold/PhD-SNPg", + "url": "https://github.com/biofold/PhD-SNPg", + "rel": "/software/repository/github/biofold/PhD-SNPg", + "avatar": "https://avatars.githubusercontent.com/u/15142086?v=4", + "description": null, "topics": [] }, { - "uid": "github/oxpig/ImmuneBuilder", - "url": "https://github.com/oxpig/ImmuneBuilder", - "rel": "/software/repository/github/oxpig/ImmuneBuilder", - "avatar": "https://avatars.githubusercontent.com/u/43843505?v=4", - "description": "Predict the structure of immune receptor proteins", + "uid": "github/sonoUnoTeam/sonoUno-desktop", + "url": "https://github.com/sonoUnoTeam/sonoUno-desktop", + "rel": "/software/repository/github/sonoUnoTeam/sonoUno-desktop", + "avatar": "https://avatars.githubusercontent.com/u/51083952?v=4", + "description": "SonoUno is a sonification software for astronomical data presented on a table (txt or csv files). The software is being developed based on the study of other software, standards of accessibility like the ISO 9241-171:2008 (Guidance on software accessibility) and theoretical framework based on literature review and end user tests.", "topics": [] }, { - "uid": "github/SYalouz/QuantNBody", - "url": "https://github.com/SYalouz/QuantNBody", - "rel": "/software/repository/github/SYalouz/QuantNBody", - "avatar": "https://avatars.githubusercontent.com/u/52918633?v=4", - "description": "QuantNBody : a python package for quantum chemistry/physics to manipulate many-body operators and wave functions.", + "uid": "github/maickrau/GraphAligner", + "url": "https://github.com/maickrau/GraphAligner", + "rel": "/software/repository/github/maickrau/GraphAligner", + "avatar": "https://avatars.githubusercontent.com/u/1543674?v=4", + "description": "Sequence to graph aligner for long reads", "topics": [] }, { - "uid": "github/shaelebrown/TDApplied", - "url": "https://github.com/shaelebrown/TDApplied", - "rel": "/software/repository/github/shaelebrown/TDApplied", - "avatar": "https://avatars.githubusercontent.com/u/56615362?v=4", - "description": "An R package for statistics and machine learning with persistence diagrams", + "uid": "github/maickrau/MBG", + "url": "https://github.com/maickrau/MBG", + "rel": "/software/repository/github/maickrau/MBG", + "avatar": "https://avatars.githubusercontent.com/u/1543674?v=4", + "description": "Minimizer based sparse de Bruijn graph constructor.", "topics": [] }, { - "uid": "github/upb-lea/gym-electric-motor", - "url": "https://github.com/upb-lea/gym-electric-motor", - "rel": "/software/repository/github/upb-lea/gym-electric-motor", - "avatar": "https://avatars.githubusercontent.com/u/55782224?v=4", - "description": "Gym Electric Motor (GEM): An OpenAI Gym Environment for Electric Motors", + "uid": "github/vpc-ccg/calib", + "url": "https://github.com/vpc-ccg/calib", + "rel": "/software/repository/github/vpc-ccg/calib", + "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", + "description": "clusters paired-end reads using their barcodes and sequences.", "topics": [ - "reinforcement-learning", - "openai-gym-environments", - "machinelearning", - "openai-gym", - "openai", - "gym-environment", - "pmsm", - "motor-models", - "converters", - "benchmark", - "electrical-engineering", - "electric-drive" + "tagged-reads", + "barcode-sequencing", + "clustering", + "paired-end-sequencing", + "liquid-biopsy" ] }, { - "uid": "github/upb-lea/ElectricGrid.jl", - "url": "https://github.com/upb-lea/ElectricGrid.jl", - "rel": "/software/repository/github/upb-lea/ElectricGrid.jl", - "avatar": "https://avatars.githubusercontent.com/u/55782224?v=4", - "description": "A time domain electrical energy grid modeling and simulation tool with a focus on the control of power electronics converters", - "topics": [] - }, - { - "uid": "github/upb-lea/openmodelica-microgrid-gym", - "url": "https://github.com/upb-lea/openmodelica-microgrid-gym", - "rel": "/software/repository/github/upb-lea/openmodelica-microgrid-gym", - "avatar": "https://avatars0.githubusercontent.com/u/55782224?v=4", - "description": "OpenModelica Microgrid Gym (OMG): An OpenAI Gym Environment for Microgrids", + "uid": "github/vpc-ccg/svict", + "url": "https://github.com/vpc-ccg/svict", + "rel": "/software/repository/github/vpc-ccg/svict", + "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", + "description": "Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA", "topics": [ - "reinforcement-learning", - "openai-gym", - "openai-gym-environments", - "machine-learning", - "control", - "simulation", - "modelica", - "openmodelica", - "power-electronics", - "power-systems", - "microgrid", - "energy-system-modeling", - "power-supply", - "smart-grids", - "engineering", - "electrical-engineering", - "python" + "paired-end-sequencing", + "structural-variation", + "liquid-biopsy" ] }, { - "uid": "github/gumilevskij/Framework", - "url": "https://github.com/gumilevskij/Framework", - "rel": "/software/repository/github/gumilevskij/Framework", - "avatar": "https://avatars.githubusercontent.com/u/195054977?v=4", - "description": "Python Framework for DSGE Modeling", + "uid": "github/vpc-ccg/genion", + "url": "https://github.com/vpc-ccg/genion", + "rel": "/software/repository/github/vpc-ccg/genion", + "avatar": "https://avatars.githubusercontent.com/u/26337493?v=4", + "description": "GENe fusION", "topics": [] }, { - "uid": "github/3top1a/biotools-linter", - "url": "https://github.com/3top1a/biotools-linter", - "rel": "/software/repository/github/3top1a/biotools-linter", - "avatar": "https://avatars.githubusercontent.com/u/57371001?v=4", - "description": "This website serves to help bio.tools database editors and maintainers help with data quality by searching for common quantifiable errors.", - "topics": [ - "biotools", - "linter" - ] - }, - { - "uid": "github/joefarrington/mdpax", - "url": "https://github.com/joefarrington/mdpax", - "rel": "/software/repository/github/joefarrington/mdpax", - "avatar": "https://avatars.githubusercontent.com/u/22770922?v=4", - "description": "GPU-accelerated MDP solvers in Python with JAX", - "topics": [ - "dynamic-programming", - "jax", - "optimization", - "reinforcement-learning", - "value-iteration" - ] + "uid": "github/olivecha/guitarsounds", + "url": "https://github.com/olivecha/guitarsounds", + "rel": "/software/repository/github/olivecha/guitarsounds", + "avatar": "https://avatars.githubusercontent.com/u/78630053?v=4", + "description": "python library to analyse guitar sounds", + "topics": [] }, { - "uid": "github/lrnv/Copulas.jl", - "url": "https://github.com/lrnv/Copulas.jl", - "rel": "/software/repository/github/lrnv/Copulas.jl", - "avatar": "https://avatars.githubusercontent.com/u/15571061?v=4", - "description": "A fully `Distributions.jl`-compliant copula package", + "uid": "github/karel-brinda/ococo", + "url": "https://github.com/karel-brinda/ococo", + "rel": "/software/repository/github/karel-brinda/ococo", + "avatar": "https://avatars.githubusercontent.com/u/8779046?v=4", + "description": "Ococo: the first online variant and consensus caller. Call genomic consensus directly from an unsorted SAM/BAM stream.", "topics": [ - "julia", - "copula" + "ngs", + "variant-calling", + "online-algorithms", + "bioinformatics", + "consensus" ] }, { - "uid": "github/lrnv/cort", - "url": "https://github.com/lrnv/cort", - "rel": "/software/repository/github/lrnv/cort", - "avatar": "https://avatars3.githubusercontent.com/u/15571061?v=4", - "description": "Classes and Tools For Some Empirical and Non-parametrical Copula Models.", + "uid": "github/JoshSchramm94/validateHOT", + "url": "https://github.com/JoshSchramm94/validateHOT", + "rel": "/software/repository/github/JoshSchramm94/validateHOT", + "avatar": "https://avatars.githubusercontent.com/u/93316398?v=4", + "description": "\ud83c\udfaf Validate your Holdout Task and other tools for preference measurement techniques", "topics": [] }, { - "uid": "github/SNOwGLoBES/snowglobes", - "url": "https://github.com/SNOwGLoBES/snowglobes", - "rel": "/software/repository/github/SNOwGLoBES/snowglobes", - "avatar": "https://avatars.githubusercontent.com/u/24531429?v=4", - "description": "SNOwGLoBES code: SuperNova Observatories with GLoBES", - "topics": [] + "uid": "github/m2aia/pym2aia", + "url": "https://github.com/m2aia/pym2aia", + "rel": "/software/repository/github/m2aia/pym2aia", + "avatar": "https://avatars.githubusercontent.com/u/115093852?v=4", + "description": "pyM\u00b2aia is a Python package for memory-efficient access and processing of mass spectrometry image data. The I/O functionality is derived from the interactive desktop application M\u00b2aia. Special features are the batch generator utilities for deep learning applications.", + "topics": [ + "mass-spectrometry-imaging", + "python", + "deep-learning" + ] }, { - "uid": "github/calebclass/Shiny-NanoTube", - "url": "https://github.com/calebclass/Shiny-NanoTube", - "rel": "/software/repository/github/calebclass/Shiny-NanoTube", - "avatar": "https://avatars.githubusercontent.com/u/272631?v=4", - "description": "A web app for easier NanoString gene expression analysis", + "uid": "github/m2aia/m2aia", + "url": "https://github.com/m2aia/m2aia", + "rel": "/software/repository/github/m2aia/m2aia", + "avatar": "https://avatars.githubusercontent.com/u/115093852?v=4", + "description": "Mass spectrometry imaging applications for interactive analysis in MITK (M\u00b2aia)", "topics": [ - "shiny", - "differential-expression", - "nanostring" + "interactive-analysis", + "mass-spectrometry-imaging", + "3d-reconstruction", + "multi-modal", + "docker" ] }, { - "uid": "github/Toloka/crowd-kit", - "url": "https://github.com/Toloka/crowd-kit", - "rel": "/software/repository/github/Toloka/crowd-kit", - "avatar": "https://avatars.githubusercontent.com/u/76212487?v=4", - "description": "Control the quality of your labeled data with the Python tools you already know.", + "uid": "github/MREYE-LUMC/ZOSPy", + "url": "https://github.com/MREYE-LUMC/ZOSPy", + "rel": "/software/repository/github/MREYE-LUMC/ZOSPy", + "avatar": "https://avatars.githubusercontent.com/u/64529547?v=4", + "description": "Wrapper around the Zemax OpticStudio API. Provides a more pythonic and intuitive way to interact with the ZOS-API through python using a .NET connection. ", "topics": [ - "data-science", - "data-mining", - "crowd", - "toloka", - "labeling", - "annotation", - "aggregations", "python", - "crowdsourcing", - "quality-control", - "truth-inference" + "opticstudio", + "zos-api", + "zemax", + "optics", + "optics-simulation" ] }, { - "uid": "github/mberto79/XCALibre.jl", - "url": "https://github.com/mberto79/XCALibre.jl", - "rel": "/software/repository/github/mberto79/XCALibre.jl", - "avatar": "https://avatars.githubusercontent.com/u/61561260?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/flosalbizziae/kataegis", - "url": "https://github.com/flosalbizziae/kataegis", - "rel": "/software/repository/github/flosalbizziae/kataegis", - "avatar": "https://avatars.githubusercontent.com/u/10743837?v=4", - "description": null, + "uid": "github/jts/sga", + "url": "https://github.com/jts/sga", + "rel": "/software/repository/github/jts/sga", + "avatar": "https://avatars.githubusercontent.com/u/389535?v=4", + "description": "de novo sequence assembler using string graphs", "topics": [] }, { - "uid": "github/dynamicslab/pysindy", - "url": "https://github.com/dynamicslab/pysindy", - "rel": "/software/repository/github/dynamicslab/pysindy", - "avatar": "https://avatars.githubusercontent.com/u/59835780?v=4", - "description": "A package for the sparse identification of nonlinear dynamical systems from data", + "uid": "github/jts/nanopolish", + "url": "https://github.com/jts/nanopolish", + "rel": "/software/repository/github/jts/nanopolish", + "avatar": "https://avatars.githubusercontent.com/u/389535?v=4", + "description": "Signal-level algorithms for MinION data", "topics": [ - "dynamical-systems", - "machine-learning", - "sparse-regression", - "model-discovery", - "system-identification", - "nonlinear-dynamics" + "bioinformatics", + "genome-assembly", + "epigenetics", + "methylation", + "science", + "c-plus-plus" ] }, { - "uid": "github/tumcms/Open-Infra-Platform", - "url": "https://github.com/tumcms/Open-Infra-Platform", - "rel": "/software/repository/github/tumcms/Open-Infra-Platform", - "avatar": "https://avatars.githubusercontent.com/u/13763357?v=4", - "description": "This is the official repository of the open-source Open Infra Platform software (as of April 2020).", + "uid": "github/YuRui8879/MRASleepNet", + "url": "https://github.com/YuRui8879/MRASleepNet", + "rel": "/software/repository/github/YuRui8879/MRASleepNet", + "avatar": "https://avatars.githubusercontent.com/u/46178344?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/linbox-team/linbox", + "url": "https://github.com/linbox-team/linbox", + "rel": "/software/repository/github/linbox-team/linbox", + "avatar": "https://avatars1.githubusercontent.com/u/13101892?v=4", + "description": "LinBox - C++ library for exact, high-performance linear algebra ", "topics": [ - "ifc", - "infrastructure", - "boost", - "point-cloud", - "building-information-modelling", - "okstra" + "linear-algebra", + "finite-fields", + "multiprecision", + "blackbox", + "linear-system-solver" ] }, { - "uid": "github/zd1/telseq", - "url": "https://github.com/zd1/telseq", - "rel": "/software/repository/github/zd1/telseq", - "avatar": "https://avatars.githubusercontent.com/u/814295?v=4", - "description": "A software for calculating telomere length", + "uid": "github/inducer/modepy", + "url": "https://github.com/inducer/modepy", + "rel": "/software/repository/github/inducer/modepy", + "avatar": "https://avatars.githubusercontent.com/u/352067?v=4", + "description": "Modes and nodes for high-order discretizations", "topics": [] }, { - "uid": "github/renecotyfanboy/jaxspec", - "url": "https://github.com/renecotyfanboy/jaxspec", - "rel": "/software/repository/github/renecotyfanboy/jaxspec", - "avatar": "https://avatars.githubusercontent.com/u/49200287?v=4", - "description": "jaxspec is an X-ray spectra Bayesian analysis package, relying on JAX to enable just in time compilation", + "uid": "github/kpicteam/kpic_pipeline", + "url": "https://github.com/kpicteam/kpic_pipeline", + "rel": "/software/repository/github/kpicteam/kpic_pipeline", + "avatar": "https://avatars.githubusercontent.com/u/53029575?v=4", + "description": "KPIC Data Reduction Pipeline", "topics": [] }, { - "uid": "github/cma2015/iwa-miRNA", - "url": "https://github.com/cma2015/iwa-miRNA", - "rel": "/software/repository/github/cma2015/iwa-miRNA", - "avatar": "https://avatars.githubusercontent.com/u/14050193?v=4", - "description": "iwa-miRNA is a web-based platform for interactive annotation of plant miRNAs", - "topics": [] + "uid": "github/minzastro/unidam", + "url": "https://github.com/minzastro/unidam", + "rel": "/software/repository/github/minzastro/unidam", + "avatar": "https://avatars.githubusercontent.com/u/7056224?v=4", + "description": "UniDAM tool: A Unified tool to estimate Distances, Ages, and Masses of stars from spectrophotometric, astrometric (Gaia) and asteroseismic data", + "topics": [ + "astrophysics", + "astronomy", + "python", + "isochrones" + ] }, { - "uid": "github/halomod/hmf", - "url": "https://github.com/halomod/hmf", - "rel": "/software/repository/github/halomod/hmf", - "avatar": "https://avatars.githubusercontent.com/u/78101746?v=4", - "description": "Python halo mass function calculator", + "uid": "github/galaxy001/pirs", + "url": "https://github.com/galaxy001/pirs", + "rel": "/software/repository/github/galaxy001/pirs", + "avatar": "https://avatars.githubusercontent.com/u/863605?v=4", + "description": "profile basd Illumina pair-end Reads Simulator", "topics": [] }, { - "uid": "github/halomod/halomod", - "url": "https://github.com/halomod/halomod", - "rel": "/software/repository/github/halomod/halomod", - "avatar": "https://avatars.githubusercontent.com/u/78101746?v=4", - "description": "Python package for dealing with the Halo Model", + "uid": "github/mackelab/sbi", + "url": "https://github.com/mackelab/sbi", + "rel": "/software/repository/github/mackelab/sbi", + "avatar": "https://avatars0.githubusercontent.com/u/9674966?v=4", + "description": "Simulation-based inference in PyTorch", "topics": [] }, { - "uid": "github/thejasvibr/bat_beamshapes", - "url": "https://github.com/thejasvibr/bat_beamshapes", - "rel": "/software/repository/github/thejasvibr/bat_beamshapes", - "avatar": "https://avatars.githubusercontent.com/u/12443569?v=4", - "description": "Directivity functions for various sound sources", - "topics": [ - "acoustics", - "directivity", - "sound", - "beamshape", - "bioacoustics" - ] + "uid": "github/Weeks-UNC/RingMapper", + "url": "https://github.com/Weeks-UNC/RingMapper", + "rel": "/software/repository/github/Weeks-UNC/RingMapper", + "avatar": "https://avatars.githubusercontent.com/u/20342652?v=4", + "description": "Code for performing RING-MaP and PAIR-MaP analysis", + "topics": [] }, { - "uid": "github/astrogilda/mirkwood", - "url": "https://github.com/astrogilda/mirkwood", - "rel": "/software/repository/github/astrogilda/mirkwood", - "avatar": "https://avatars.githubusercontent.com/u/23521054?v=4", - "description": null, + "uid": "github/cbml-forth/eucaim_wizard_tool", + "url": "https://github.com/cbml-forth/eucaim_wizard_tool", + "rel": "/software/repository/github/cbml-forth/eucaim_wizard_tool", + "avatar": "https://avatars.githubusercontent.com/u/24669067?v=4", + "description": "The EUCAIM Wizard tool is based on ARX software which is open-source data de-identification / anonymization software that supports various anonymization techniques. The freely available ARX software has been configured for the specific requirements of the EUCAIM platform taking into account the specific imaging and clinical data characteristics.", "topics": [] }, { - "uid": "github/alerpaschoal/CODARFE", - "url": "https://github.com/alerpaschoal/CODARFE", - "rel": "/software/repository/github/alerpaschoal/CODARFE", - "avatar": "https://avatars.githubusercontent.com/u/38994165?v=4", - "description": null, + "uid": "github/xychcz/S3Fit", + "url": "https://github.com/xychcz/S3Fit", + "rel": "/software/repository/github/xychcz/S3Fit", + "avatar": "https://avatars.githubusercontent.com/u/14907162?v=4", + "description": "S3Fit: a Simultaneous Spectrum and photometric-SED Fitting code for observation of galaxies", "topics": [] }, { - "uid": "github/mdsteiner/EFAtools", - "url": "https://github.com/mdsteiner/EFAtools", - "rel": "/software/repository/github/mdsteiner/EFAtools", - "avatar": "https://avatars3.githubusercontent.com/u/26483702?v=4", - "description": null, + "uid": "github/Sheng-Qi-Yang/HIILines", + "url": "https://github.com/Sheng-Qi-Yang/HIILines", + "rel": "/software/repository/github/Sheng-Qi-Yang/HIILines", + "avatar": "https://avatars.githubusercontent.com/u/31641147?v=4", + "description": "An analytical ionized ISM emission line model. ", "topics": [] }, { - "uid": "github/niess/calzone", - "url": "https://github.com/niess/calzone", - "rel": "/software/repository/github/niess/calzone", - "avatar": "https://avatars.githubusercontent.com/u/11327514?v=4", - "description": "A Geant4 Python wrapper for the simulation of outdoor particle detectors", + "uid": "github/soraxas/sbp-env", + "url": "https://github.com/soraxas/sbp-env", + "rel": "/software/repository/github/soraxas/sbp-env", + "avatar": "https://avatars.githubusercontent.com/u/22362177?v=4", + "description": "Motion planning environment for Sampling-based Planners", "topics": [ - "geant4", - "monte-carlo", - "python" + "pathfinding", + "robotics", + "rrdt", + "rrt", + "rrt-star", + "motion-planning" ] }, { - "uid": "github/HARMONI-ELT/HSIM", - "url": "https://github.com/HARMONI-ELT/HSIM", - "rel": "/software/repository/github/HARMONI-ELT/HSIM", - "avatar": "https://avatars.githubusercontent.com/u/45947677?v=4", - "description": "HSIM: HARMONI simulation pipeline", + "uid": "github/dtcc-platform/dtcc-builder", + "url": "https://github.com/dtcc-platform/dtcc-builder", + "rel": "/software/repository/github/dtcc-platform/dtcc-builder", + "avatar": "https://avatars.githubusercontent.com/u/125552939?v=4", + "description": null, "topics": [] }, { - "uid": "github/paucablop/chemotools", - "url": "https://github.com/paucablop/chemotools", - "rel": "/software/repository/github/paucablop/chemotools", - "avatar": "https://avatars.githubusercontent.com/u/34301441?v=4", - "description": "Integrate your chemometric tools with the scikit-learn API \ud83e\uddea \ud83e\udd16 ", + "uid": "github/ttgump/scDeepCluster_pytorch", + "url": "https://github.com/ttgump/scDeepCluster_pytorch", + "rel": "/software/repository/github/ttgump/scDeepCluster_pytorch", + "avatar": "https://avatars.githubusercontent.com/u/1187979?v=4", + "description": "Pytorch implementation of scDeepCluster for Single Cell RNA-seq data", "topics": [ - "chemometrics", - "machine-learning", - "python", - "scikit-learn", - "sklearn", - "spectra", - "hacktoberfest", - "artificial-intelligence", - "autoencoders", "deep-learning", - "ir-spectroscopy", - "multivariate-analysis", - "raman-spectroscopy", - "spectroscopy", - "nir-spectroscopy" + "unsupervised-learning", + "single-cell-rna-seq", + "clustering", + "single-cell" ] }, { - "uid": "github/JieweiHuang/Coport", - "url": "https://github.com/JieweiHuang/Coport", - "rel": "/software/repository/github/JieweiHuang/Coport", - "avatar": "https://avatars.githubusercontent.com/u/175380276?v=4", - "description": "A Covariant Polarized Radiative Transfer Code", - "topics": [] + "uid": "github/ttgump/scDHMap", + "url": "https://github.com/ttgump/scDHMap", + "rel": "/software/repository/github/ttgump/scDHMap", + "avatar": "https://avatars.githubusercontent.com/u/1187979?v=4", + "description": "Model-based deep hyperbolic manifold learning for visualizing complex hierarchical structures in single-cell genomics data", + "topics": [ + "deep-learning", + "hyperbolic-embeddings", + "single-cell", + "dimensionality-reduction", + "manifold-learning", + "visualization" + ] }, { - "uid": "github/mrbell/fsclean", - "url": "https://github.com/mrbell/fsclean", - "rel": "/software/repository/github/mrbell/fsclean", - "avatar": "https://avatars.githubusercontent.com/u/2854337?v=4", - "description": "A Faraday synthesis application that performs 3D CLEAN deconvolution of multi-frequency, polarized radio interferometric data following Bell & En\u00dflin (2012).", + "uid": "github/RudolfCardinal/camcops", + "url": "https://github.com/ucam-department-of-psychiatry/camcops", + "rel": "/software/repository/github/RudolfCardinal/camcops", + "avatar": "https://avatars.githubusercontent.com/u/47028450?v=4", + "description": "Cambridge Cognitive and Psychiatric Test Kit (CamCOPS)", "topics": [] }, { - "uid": "github/getzlab/rnaseqc", - "url": "https://github.com/getzlab/rnaseqc", - "rel": "/software/repository/github/getzlab/rnaseqc", - "avatar": "https://avatars.githubusercontent.com/u/59453338?v=4", - "description": "Fast, efficient RNA-Seq metrics for quality control and process optimization", - "topics": [ - "rnaseq", - "rna-seq", - "bioinformatics" - ] + "uid": "github/federicomarulli/CosmoBolognaLib", + "url": "https://github.com/federicomarulli/CosmoBolognaLib", + "rel": "/software/repository/github/federicomarulli/CosmoBolognaLib", + "avatar": "https://avatars.githubusercontent.com/u/6041560?v=4", + "description": "free software C++ libraries for cosmological calculations", + "topics": [] }, { - "uid": "github/ggmichael/craterstats", - "url": "https://github.com/ggmichael/craterstats", - "rel": "/software/repository/github/ggmichael/craterstats", - "avatar": "https://avatars.githubusercontent.com/u/75208810?v=4", - "description": "Craterstats - a tool to analyse and plot crater count data for planetary surface dating", + "uid": "github/Leo-Simpson/c-lasso", + "url": "https://github.com/Leo-Simpson/c-lasso", + "rel": "/software/repository/github/Leo-Simpson/c-lasso", + "avatar": "https://avatars.githubusercontent.com/u/52931376?v=4", + "description": "c-lasso: a Python package for constrained sparse regression and classification", "topics": [] }, { - "uid": "github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", - "url": "https://github.com/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", - "rel": "/software/repository/github/ELELAB/CAncer-bioMarker-Prediction-Pipeline-CAMPP", - "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", - "description": "The Cancer bioMarker Prediction Pipeline (CAMPP) ", + "uid": "github/lnscan/mitoSplitter", + "url": "https://github.com/lnscan/mitoSplitter", + "rel": "/software/repository/github/lnscan/mitoSplitter", + "avatar": "https://avatars.githubusercontent.com/u/63651125?v=4", + "description": null, "topics": [] }, { - "uid": "github/ELELAB/cancermuts", - "url": "https://github.com/ELELAB/cancermuts", - "rel": "/software/repository/github/ELELAB/cancermuts", - "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", - "description": "Software for the automatic annotation of cancer mutations", + "uid": "github/nespinoza/exonailer", + "url": "https://github.com/nespinoza/exonailer", + "rel": "/software/repository/github/nespinoza/exonailer", + "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", + "description": "Tools for fitting transiting exoplanet lightcurves and radial velocities", "topics": [] }, { - "uid": "github/ELELAB/LipidDyn", - "url": "https://github.com/ELELAB/LipidDyn", - "rel": "/software/repository/github/ELELAB/LipidDyn", - "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", - "description": "repository associated to our pipeline for lipid dynamics", + "uid": "github/nespinoza/limb-darkening", + "url": "https://github.com/nespinoza/limb-darkening", + "rel": "/software/repository/github/nespinoza/limb-darkening", + "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", + "description": "Codes to generate limb-darkening coefficients using arbitrary response functions as explained in Espinoza & Jordan (2015)", "topics": [] }, { - "uid": "github/ELELAB/RosettaDDGPrediction", - "url": "https://github.com/ELELAB/RosettaDDGPrediction", - "rel": "/software/repository/github/ELELAB/RosettaDDGPrediction", - "avatar": "https://avatars.githubusercontent.com/u/12696253?v=4", - "description": null, + "uid": "github/nespinoza/juliet", + "url": "https://github.com/nespinoza/juliet", + "rel": "/software/repository/github/nespinoza/juliet", + "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", + "description": "A versatile modelling tool for transiting and non-transiting (single and multiple) exoplanetary systems", "topics": [] }, { - "uid": "github/MolMeDB/MolMeDB", - "url": "https://github.com/MolMeDB/MolMeDB", - "rel": "/software/repository/github/MolMeDB/MolMeDB", - "avatar": "https://avatars3.githubusercontent.com/u/62621831?v=4", - "description": "MolMeDB is an open chemistry database about interactions of molecules with membranes.", - "topics": [ - "chemistry", - "lipids", - "membranes", - "cheminformatics", - "database", - "small-molecule", - "permeability" - ] + "uid": "github/nespinoza/mc-spam", + "url": "https://github.com/nespinoza/mc-spam", + "rel": "/software/repository/github/nespinoza/mc-spam", + "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", + "description": "MC-SPAM is an algorithm to generate limb-darkening coefficients from models that are comparable to transit photometry according to the formalism described in Espinoza & Jordan (2015)", + "topics": [] }, { - "uid": "github/WMD-group/StarryNight", - "url": "https://github.com/WMD-group/StarryNight", - "rel": "/software/repository/github/WMD-group/StarryNight", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "Monte Carlo codes to simulate polar domains in hybrid perovskite solar cells", - "topics": [ - "monte-carlo-codes", - "ferroelectric-domains", - "perovskite", - "photovoltaic", - "monte-carlo", - "dipole-domains", - "recombination", - "semiconductor" - ] + "uid": "github/nespinoza/ld-exosim", + "url": "https://github.com/nespinoza/ld-exosim", + "rel": "/software/repository/github/nespinoza/ld-exosim", + "avatar": "https://avatars.githubusercontent.com/u/2046682?v=4", + "description": "Code to simulate biases introduced by using different limb-darkening laws as explained in Espinoza & Jord\u00e1n (2016)", + "topics": [] }, { - "uid": "github/WMD-group/Eris", - "url": "https://github.com/WMD-group/Eris", - "rel": "/software/repository/github/WMD-group/Eris", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "Monte Carlo codes to simulate cation disorder in kesterite semiconductors", - "topics": [ - "monte-carlo", - "photovoltaic", - "materials", - "thermodynamics", - "physics", - "semiconductor", - "defects" - ] + "uid": "github/statistical-thinking/KI.ENNA", + "url": "https://github.com/statistical-thinking/KI.ENNA", + "rel": "/software/repository/github/statistical-thinking/KI.ENNA", + "avatar": "https://avatars.githubusercontent.com/u/20285492?v=4", + "description": "KI-ENNA: (E)in (N)euronales (N)etz zum (A)usprobieren / AI-ANNE: (A) (N)eural (N)et for (E)xploration", + "topics": [] }, { - "uid": "github/WMD-group/SMACT", - "url": "https://github.com/WMD-group/SMACT", - "rel": "/software/repository/github/WMD-group/SMACT", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "Python package to aid materials design", + "uid": "github/migueldvb/cine", + "url": "https://github.com/migueldvb/cine", + "rel": "/software/repository/github/migueldvb/cine", + "avatar": "https://avatars.githubusercontent.com/u/678759?v=4", + "description": "Calculate infrared pumping rates by solar radiation", "topics": [ - "materials-science", - "materials-informatics", - "materials-screening", - "materials-design", - "machine-learning" + "python", + "astronomy", + "science", + "comets" ] }, { - "uid": "github/WMD-group/MacroDensity", - "url": "https://github.com/WMD-group/MacroDensity", - "rel": "/software/repository/github/WMD-group/MacroDensity", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "Analyse electron density & potential grids using Python", + "uid": "github/vavrines/Kinetic.jl", + "url": "https://github.com/vavrines/Kinetic.jl", + "rel": "/software/repository/github/vavrines/Kinetic.jl", + "avatar": "https://avatars.githubusercontent.com/u/21040679?v=4", + "description": "Universal modeling and simulation of fluid dynamics upon machine learning", "topics": [ - "electrostatic-potential", - "ionisation-potential", - "workfunction", - "density-functional-theory", - "vasp", - "semiconductor-physics" + "kinetic-theory", + "cfd", + "boltzmann-equation", + "gas-dynamics", + "plasma", + "finite-volume", + "advection-diffusion", + "pde", + "sciml", + "deep-learning", + "scientific-machine-learning", + "finite-element-methods" ] }, { - "uid": "github/WMD-group/hybrid-perovskites", - "url": "https://github.com/WMD-group/hybrid-perovskites", - "rel": "/software/repository/github/WMD-group/hybrid-perovskites", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "DFT optimised crystal structures of inorganic and hybrid halide perovskites", - "topics": [] + "uid": "github/daniel-muthukrishna/astrodash", + "url": "https://github.com/daniel-muthukrishna/astrodash", + "rel": "/software/repository/github/daniel-muthukrishna/astrodash", + "avatar": "https://avatars.githubusercontent.com/u/17826840?v=4", + "description": "Deep learning for the automated spectral classification of supernovae", + "topics": [ + "supernovae", + "deep-learning", + "deep-neural-networks", + "tensorflow", + "machine-learning", + "classification", + "transients", + "pypi", + "astronomy", + "cosmology", + "astrophysics", + "spectra" + ] }, { - "uid": "github/WMD-group/CarrierCapture.jl", - "url": "https://github.com/WMD-group/CarrierCapture.jl", - "rel": "/software/repository/github/WMD-group/CarrierCapture.jl", - "avatar": "https://avatars.githubusercontent.com/u/1716969?v=4", - "description": "Package to compute trap-assisted electron and hole capture in semiconducting compounds", + "uid": "github/EliabCanul/nauyaca", + "url": "https://github.com/EliabCanul/nauyaca", + "rel": "/software/repository/github/EliabCanul/nauyaca", + "avatar": "https://avatars.githubusercontent.com/u/43527963?v=4", + "description": "Nauyaca is a tool to determine planetary masses and orbital elements through the fitting of observed mid-transit times, from a N-body approach.", "topics": [ - "defects", - "semiconductors", - "electronic-structure", - "materials-design", - "solar-cells" + "jupyter-notebook", + "python" ] }, { - "uid": "github/Clinical-Genomics-Umea/fraggler", - "url": "https://github.com/Clinical-Genomics-Umea/fraggler", - "rel": "/software/repository/github/Clinical-Genomics-Umea/fraggler", - "avatar": "https://avatars.githubusercontent.com/u/98591011?v=4", + "uid": "github/carlodev/SyntheticEddyMethod.jl", + "url": "https://github.com/carlodev/SyntheticEddyMethod.jl", + "rel": "/software/repository/github/carlodev/SyntheticEddyMethod.jl", + "avatar": "https://avatars.githubusercontent.com/u/100294007?v=4", "description": null, "topics": [] }, { - "uid": "github/bfarr/exocartographer", - "url": "https://github.com/bfarr/exocartographer", - "rel": "/software/repository/github/bfarr/exocartographer", - "avatar": "https://avatars.githubusercontent.com/u/2041208?v=4", - "description": "A forward-modeling tool for constraining surface maps orbital parameters of exoplanets from time-resolved photometry", + "uid": "github/carlodev/SegregatedVMSSolver.jl", + "url": "https://github.com/carlodev/SegregatedVMSSolver.jl", + "rel": "/software/repository/github/carlodev/SegregatedVMSSolver.jl", + "avatar": "https://avatars.githubusercontent.com/u/100294007?v=4", + "description": null, "topics": [] }, { - "uid": "github/bfarr/kombine", - "url": "https://github.com/bfarr/kombine", - "rel": "/software/repository/github/bfarr/kombine", - "avatar": "https://avatars.githubusercontent.com/u/2041208?v=4", - "description": "A kernel-density-based, embarrassingly parallel ensemble sampler", + "uid": "github/KopalliV/Benchmarking_graph_pipelines", + "url": "https://github.com/KopalliV/Benchmarking_graph_pipelines", + "rel": "/software/repository/github/KopalliV/Benchmarking_graph_pipelines", + "avatar": "https://avatars.githubusercontent.com/u/136314523?v=4", + "description": null, "topics": [] }, { - "uid": "github/agreenbaum/ImPlaneIA", - "url": "https://github.com/agreenbaum/ImPlaneIA", - "rel": "/software/repository/github/agreenbaum/ImPlaneIA", - "avatar": "https://avatars.githubusercontent.com/u/4885221?v=4", - "description": "Tools for fitting (image plane fringes), calibrating, and analyzing NRM data across multiple instruments and modes", - "topics": [] + "uid": "github/CityU-AIM-Group/HTD", + "url": "https://github.com/CityU-AIM-Group/HTD", + "rel": "/software/repository/github/CityU-AIM-Group/HTD", + "avatar": "https://avatars.githubusercontent.com/u/81352317?v=4", + "description": "[TIP' 21] HTD: Heterogeneous Task Decoupling for Two-stage Object Detection", + "topics": [ + "object-detection", + "faster-rcnn", + "graph", + "mmdetection" + ] }, { - "uid": "github/agreenbaum/gsgs", - "url": "https://github.com/agreenbaum/gsgs", - "rel": "/software/repository/github/agreenbaum/gsgs", - "avatar": "https://avatars.githubusercontent.com/u/4885221?v=4", - "description": "gsgs does phase retrieval on images given an estimate of the pupil phase, like one from a non-redundant mask ", - "topics": [] + "uid": "github/yjx1217/RecombineX", + "url": "https://github.com/yjx1217/RecombineX", + "rel": "/software/repository/github/yjx1217/RecombineX", + "avatar": "https://avatars.githubusercontent.com/u/701942?v=4", + "description": "A computational framework for tetrad-based genotyping & recombination landscape analysis", + "topics": [ + "tetrad", + "recombination", + "meiosis", + "spore" + ] }, { - "uid": "github/antismash/antismash", - "url": "https://github.com/antismash/antismash", - "rel": "/software/repository/github/antismash/antismash", - "avatar": "https://avatars.githubusercontent.com/u/17174811?v=4", - "description": "antiSMASH", + "uid": "github/healytwin1/HISS", + "url": "https://github.com/healytwin1/HISS", + "rel": "/software/repository/github/healytwin1/HISS", + "avatar": "https://avatars.githubusercontent.com/u/11073757?v=4", + "description": "HI Stacking Software", "topics": [] }, { - "uid": "github/migp11/pyfastcore", - "url": "https://github.com/migp11/pyfastcore", - "rel": "/software/repository/github/migp11/pyfastcore", - "avatar": "https://avatars.githubusercontent.com/u/6224685?v=4", - "description": "A python implementation of the context-specific model extraction method FastCore by Vlassis et al. (2014).", + "uid": "github/choosehappy/HoverFast", + "url": "https://github.com/choosehappy/HoverFast", + "rel": "/software/repository/github/choosehappy/HoverFast", + "avatar": "https://avatars.githubusercontent.com/u/9681868?v=4", + "description": "Blazing fast nuclei segmentation for brightfield Whole Slide Images", "topics": [] }, { - "uid": "github/soleneulmer/bem", - "url": "https://github.com/soleneulmer/bem", - "rel": "/software/repository/github/soleneulmer/bem", - "avatar": "https://avatars.githubusercontent.com/u/16018533?v=4", - "description": "Random forest for exoplanets", + "uid": "github/PanKonstantinos/MEvA-X", + "url": "https://github.com/PanKonstantinos/MEvA-X", + "rel": "/software/repository/github/PanKonstantinos/MEvA-X", + "avatar": "https://avatars.githubusercontent.com/u/26748316?v=4", + "description": "Open source Biomarker discovery tool based on multi-objective Evolutionary algorithm and the XGBoost Classifier", "topics": [] }, { - "uid": "github/SCM-NV/qmflows", - "url": "https://github.com/SCM-NV/qmflows", - "rel": "/software/repository/github/SCM-NV/qmflows", - "avatar": "https://avatars2.githubusercontent.com/u/17591901?v=4", - "description": "This library tackles the construction and efficient execution of computational chemistry workflows", - "topics": [ - "quantum-mechanics", - "science", - "bioinformatics", - "chemistry", - "automation", - "python-3", - "materials", - "scientific-workflows" - ] - }, - { - "uid": "github/SCM-NV/pyZacros", - "url": "https://github.com/SCM-NV/pyZacros", - "rel": "/software/repository/github/SCM-NV/pyZacros", - "avatar": "https://avatars.githubusercontent.com/u/17591901?v=4", - "description": "Python library to handle KMC codes.", + "uid": "github/adamjermyn/Skye", + "url": "https://github.com/adamjermyn/Skye", + "rel": "/software/repository/github/adamjermyn/Skye", + "avatar": "https://avatars.githubusercontent.com/u/6233759?v=4", + "description": "A differentiable equation of state", "topics": [] }, { - "uid": "github/SCM-NV/qmflows-namd", - "url": "https://github.com/SCM-NV/nano-qmflows", - "rel": "/software/repository/github/SCM-NV/qmflows-namd", - "avatar": "https://avatars2.githubusercontent.com/u/17591901?v=4", - "description": "Package containing several workflows to compute molecular properties for nanomaterials", - "topics": [ - "science", - "chemistry", - "physics", - "materials", - "quantum-chemistry", - "scientific-workflows", - "nanomaterials" - ] - }, - { - "uid": "github/WBK-Robotics/pybullet_industrial", - "url": "https://github.com/WBK-Robotics/pybullet_industrial", - "rel": "/software/repository/github/WBK-Robotics/pybullet_industrial", - "avatar": "https://avatars.githubusercontent.com/u/104063446?v=4", - "description": "A simulation package extending pybullet for industrial robot applications", - "topics": [ - "industrial-automation", - "robotics", - "simulation-framework" - ] + "uid": "github/jfwallin/JSPAM", + "url": "https://github.com/jfwallin/JSPAM", + "rel": "/software/repository/github/jfwallin/JSPAM", + "avatar": "https://avatars.githubusercontent.com/u/1709158?v=4", + "description": "Software for simulating interacting galaxies using a restricted three-body approximation", + "topics": [] }, { - "uid": "github/DS4Ag/dpest", - "url": "https://github.com/DS4Ag/dpest", - "rel": "/software/repository/github/DS4Ag/dpest", - "avatar": "https://avatars.githubusercontent.com/u/11559844?v=4", - "description": "Python package automating PEST file creation for DSSAT crop model calibration. Generates template files for Cultivar and Ecotype parameters, instruction files for OVERVIEW.OUT and PlantGro.OUT, and the main PEST control file. Includes utility to extend PlantGro.OUT files for complete time series compatibility.", + "uid": "github/clawpack/pyclaw", + "url": "https://github.com/clawpack/pyclaw", + "rel": "/software/repository/github/clawpack/pyclaw", + "avatar": "https://avatars3.githubusercontent.com/u/725474?v=4", + "description": "PyClaw is a Python-based interface to the algorithms of Clawpack and SharpClaw. It also contains the PetClaw package, which adds parallelism through PETSc.", "topics": [] }, { - "uid": "github/ulilautenschlager/crimp", - "url": "https://github.com/ulilautenschlager/crimp", - "rel": "/software/repository/github/ulilautenschlager/crimp", - "avatar": "https://avatars.githubusercontent.com/u/58597054?v=4", - "description": "Cluster relabeling based on impurity minimization", + "uid": "github/clawpack/clawpack", + "url": "https://github.com/clawpack/clawpack", + "rel": "/software/repository/github/clawpack/clawpack", + "avatar": "https://avatars3.githubusercontent.com/u/725474?v=4", + "description": "Package for solving hyperbolic systems of partial differential equations", "topics": [] }, { - "uid": "github/fruzsinaagocs/oscode", - "url": "https://github.com/fruzsinaagocs/oscode", - "rel": "/software/repository/github/fruzsinaagocs/oscode", - "avatar": "https://avatars3.githubusercontent.com/u/19972401?v=4", - "description": "Code for efficient solution of oscillatory ordinary differential equations", + "uid": "github/mirapy-org/mirapy", + "url": "https://github.com/mirapy-org/mirapy", + "rel": "/software/repository/github/mirapy-org/mirapy", + "avatar": "https://avatars.githubusercontent.com/u/49879504?v=4", + "description": "MiraPy: A Python package for Deep Learning in Astronomy", "topics": [ - "numerical-methods", - "differential-equations", - "oscillator", - "runge-kutta", - "wentzel-kramers-brillouin", - "numpy" + "deep-learning", + "astronomy", + "keras", + "machine-learning", + "classification", + "autoencoder", + "curve-fitting", + "ogle", + "htru1", + "x-ray-binaries", + "image-reconstruction", + "variable-stars" ] }, { - "uid": "github/souradipp76/MM-PoE", - "url": "https://github.com/souradipp76/MM-PoE", - "rel": "/software/repository/github/souradipp76/MM-PoE", - "avatar": "https://avatars.githubusercontent.com/u/20797533?v=4", - "description": "Multiple Choice Reasoning via. Process of Elimination using Multi-Modal Models", - "topics": [ - "inference", - "llm", - "multi-modal", - "question-answering" - ] + "uid": "github/abeelen/powspec", + "url": "https://github.com/abeelen/powspec", + "rel": "/software/repository/github/abeelen/powspec", + "avatar": "https://avatars.githubusercontent.com/u/3973209?v=4", + "description": "Power and cross spectral density of 2D arrays", + "topics": [] }, { - "uid": "github/souradipp76/ReadMeReady", - "url": "https://github.com/souradipp76/ReadMeReady", - "rel": "/software/repository/github/souradipp76/ReadMeReady", - "avatar": "https://avatars.githubusercontent.com/u/20797533?v=4", - "description": "Tool for auto-generating README documentation for code repositories", + "uid": "github/shankarpandala/lazypredict", + "url": "https://github.com/shankarpandala/lazypredict", + "rel": "/software/repository/github/shankarpandala/lazypredict", + "avatar": "https://avatars.githubusercontent.com/u/8924320?v=4", + "description": "Lazy Predict help build a lot of basic models without much code and helps understand which models works better without any parameter tuning", "topics": [ - "fine-tuning", - "llm", - "qlora", - "retrieval-augmented-generation" + "machine-learning", + "automl", + "regression", + "classification" ] }, { - "uid": "github/mawenlong2016/DeepAnnotation", - "url": "https://github.com/mawenlong2016/DeepAnnotation", - "rel": "/software/repository/github/mawenlong2016/DeepAnnotation", - "avatar": "https://avatars.githubusercontent.com/u/38175438?v=4", - "description": "a novel interpretable DL-based genomic prediction model that integrates comprehensive species- and tissue-level transcriptional regulatory functional annotations to predict phenotypes", + "uid": "github/hemanthpruthvi/PyAstroPol", + "url": "https://github.com/hemanthpruthvi/PyAstroPol", + "rel": "/software/repository/github/hemanthpruthvi/PyAstroPol", + "avatar": "https://avatars1.githubusercontent.com/u/69858702?v=4", + "description": "Instrumental Polarization Analysis of Astronomical Optics", "topics": [] }, { - "uid": "github/bezuidenhoutmc/SeeKAT", - "url": "https://github.com/BezuidenhoutMC/SeeKAT", - "rel": "/software/repository/github/bezuidenhoutmc/SeeKAT", - "avatar": "https://avatars.githubusercontent.com/u/22096485?v=4", - "description": "A code for localising a single pulse detected in multiple interferometer beams.", + "uid": "github/jbrakensiek/CORBITS", + "url": "https://github.com/jbrakensiek/CORBITS", + "rel": "/software/repository/github/jbrakensiek/CORBITS", + "avatar": "https://avatars.githubusercontent.com/u/3803974?v=4", + "description": null, "topics": [] }, { - "uid": "github/HinLeung622/pipes_vis", - "url": "https://github.com/HinLeung622/pipes_vis", - "rel": "/software/repository/github/HinLeung622/pipes_vis", - "avatar": "https://avatars.githubusercontent.com/u/56083013?v=4", - "description": "A small, interactive GUI/visualizer tool for SPS spectra, powered by bagpipes", + "uid": "github/guangtunbenzhu/NonnegMFPy", + "url": "https://github.com/guangtunbenzhu/NonnegMFPy", + "rel": "/software/repository/github/guangtunbenzhu/NonnegMFPy", + "avatar": "https://avatars.githubusercontent.com/u/1619909?v=4", + "description": "Vectorized Nonnegative Matrix Factorization with heteroscedastic uncertainties and missing data", "topics": [] }, { - "uid": "github/wangchao-malab/DeepAc4C", - "url": "https://github.com/wangchao-malab/DeepAc4C", - "rel": "/software/repository/github/wangchao-malab/DeepAc4C", - "avatar": "https://avatars.githubusercontent.com/u/37856514?v=4", - "description": null, + "uid": "github/guangtunbenzhu/SetCoverPy", + "url": "https://github.com/guangtunbenzhu/SetCoverPy", + "rel": "/software/repository/github/guangtunbenzhu/SetCoverPy", + "avatar": "https://avatars.githubusercontent.com/u/1619909?v=4", + "description": "A heuristic solver for the set cover problem", "topics": [] }, { - "uid": "github/JulienPeloton/s4cmb", - "url": "https://github.com/JulienPeloton/s4cmb", - "rel": "/software/repository/github/JulienPeloton/s4cmb", - "avatar": "https://avatars.githubusercontent.com/u/20426972?v=4", - "description": "Simulation of instrumental systematic effects in the context of CMB observations", - "topics": [ - "instrument", - "cmb", - "systematics", - "simulation" - ] - }, - { - "uid": "github/JulienPeloton/lenscov", - "url": "https://github.com/JulienPeloton/lenscov", - "rel": "/software/repository/github/JulienPeloton/lenscov", - "avatar": "https://avatars.githubusercontent.com/u/20426972?v=4", - "description": "Full CMB and lensing covariances", - "topics": [ - "lensing", - "cmb", - "covariance" - ] + "uid": "github/wm75/vaporup", + "url": "https://github.com/wm75/vaporup", + "rel": "/software/repository/github/wm75/vaporup", + "avatar": "https://avatars.githubusercontent.com/u/4742081?v=4", + "description": null, + "topics": [] }, { - "uid": "github/ExoArcturus/TriArc", - "url": "https://github.com/ExoArcturus/TriArc", - "rel": "/software/repository/github/ExoArcturus/TriArc", - "avatar": "https://avatars.githubusercontent.com/u/108469924?v=4", - "description": "(reTRIeval ARCturus) Bayesian atmospheric retrieval for assessing detectability of trace gases in exoplanet atmospheres.", + "uid": "github/codemeleon/seqPanther", + "url": "https://github.com/codemeleon/seqPanther", + "rel": "/software/repository/github/codemeleon/seqPanther", + "avatar": "https://avatars.githubusercontent.com/u/7693569?v=4", + "description": "Variant Caller and Patcher", "topics": [] }, { - "uid": "github/lwang-astro/SDAR", - "url": "https://github.com/lwang-astro/SDAR", - "rel": "/software/repository/github/lwang-astro/SDAR", - "avatar": "https://avatars.githubusercontent.com/u/8628138?v=4", - "description": "Slow-down Algorithmic regularization (SDAR) code for solving few-body problems", + "uid": "github/FridleyLab/spatialGE", + "url": "https://github.com/FridleyLab/spatialGE", + "rel": "/software/repository/github/FridleyLab/spatialGE", + "avatar": "https://avatars.githubusercontent.com/u/66082607?v=4", + "description": "Methods for visualization and analysis of spatially-resolved gene expression", "topics": [] }, { - "uid": "github/lwang-astro/PeTar", - "url": "https://github.com/lwang-astro/PeTar", - "rel": "/software/repository/github/lwang-astro/PeTar", - "avatar": "https://avatars.githubusercontent.com/u/8628138?v=4", - "description": "PeTar is a high-performance N-body code for modelling the evolution of star clusters and tidal streams, including the effect of galactic potential, dynamics of binary and hierarchical system, single and binary stellar evolution.", - "topics": [ - "petar", - "parallelization", - "sdar", - "clusters", - "cuda", - "particle-data", - "particles", - "fdps" - ] + "uid": "github/magnuspalmblad/navpa", + "url": "https://github.com/magnuspalmblad/navpa", + "rel": "/software/repository/github/magnuspalmblad/navpa", + "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", + "description": "Navpa is non-software, deriving its name from nav pa', Klingon for paper town.", + "topics": [] }, { - "uid": "github/statgen/demuxlet", - "url": "https://github.com/statgen/demuxlet", - "rel": "/software/repository/github/statgen/demuxlet", - "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", - "description": "Genetic multiplexing of barcoded single cell RNA-seq", + "uid": "github/magnuspalmblad/shic", + "url": "https://github.com/magnuspalmblad/shic", + "rel": "/software/repository/github/magnuspalmblad/shic", + "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", + "description": "shic is a collection of shims for use in automated workflow composition", "topics": [] }, { - "uid": "github/statgen/popscle", - "url": "https://github.com/statgen/popscle", - "rel": "/software/repository/github/statgen/popscle", - "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", - "description": "A suite of population scale analysis tools for single-cell genomics data including implementation of Demuxlet / Freemuxlet methods and auxilary tools", - "topics": [ - "rna-seq", - "demultiplex", - "single-cell-sequencing", - "single-cell-rna-seq", - "single-cell-omics" - ] + "uid": "github/magnuspalmblad/averageRegions", + "url": "https://github.com/magnuspalmblad/averageRegions", + "rel": "/software/repository/github/magnuspalmblad/averageRegions", + "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", + "description": "averageRegions averages the spectra in all or a defined subset of regions in a SCiLS Lab dataset and outputs this a Bruker-style .xy file.", + "topics": [] }, { - "uid": "github/statgen/Minimac4", - "url": "https://github.com/statgen/Minimac4", - "rel": "/software/repository/github/statgen/Minimac4", - "avatar": "https://avatars.githubusercontent.com/u/651584?v=4", - "description": "a lower memory and more computationally efficient implementation of the genotype imputation algorithms in minimac/mininac2/minimac3.", + "uid": "github/magnuspalmblad/addFeatures", + "url": "https://github.com/magnuspalmblad/addFeatures", + "rel": "/software/repository/github/magnuspalmblad/addFeatures", + "avatar": "https://avatars.githubusercontent.com/u/16084125?v=4", + "description": "addFeatures adds spot images to a SCiLS Lab dataset from a list of defined mass spectral features", "topics": [] }, { - "uid": "github/MREYE-LUMC/ZOSPy", - "url": "https://github.com/MREYE-LUMC/ZOSPy", - "rel": "/software/repository/github/MREYE-LUMC/ZOSPy", - "avatar": "https://avatars.githubusercontent.com/u/64529547?v=4", - "description": "Wrapper around the Zemax OpticStudio API. Provides a more pythonic and intuitive way to interact with the ZOS-API through python using a .NET connection. ", - "topics": [ - "python", - "opticstudio", - "zos-api", - "zemax", - "optics", - "optics-simulation" - ] + "uid": "github/bareid/cosmoxi2d", + "url": "https://github.com/bareid/cosmoxi2d", + "rel": "/software/repository/github/bareid/cosmoxi2d", + "avatar": "https://avatars.githubusercontent.com/u/4365718?v=4", + "description": "Evaluates the theoretical prediction for correlation function multipoles based on perturbation theory evaluation of the input real space clustering and velocity statistics to the Gaussian streaming model.", + "topics": [] }, { - "uid": "github/etiennepayet/nti", - "url": "https://github.com/etiennepayet/nti", - "rel": "/software/repository/github/etiennepayet/nti", - "avatar": "https://avatars.githubusercontent.com/u/4244570?v=4", - "description": null, + "uid": "github/pavanvyn/triple-stability", + "url": "https://github.com/pavanvyn/triple-stability", + "rel": "/software/repository/github/pavanvyn/triple-stability", + "avatar": "https://avatars.githubusercontent.com/u/16152500?v=4", + "description": "Code to check if a given configuration of a triple-star system is dynamically stable", "topics": [] }, { - "uid": "github/kusmic/pycosie", - "url": "https://github.com/kusmic/pycosie", - "rel": "/software/repository/github/kusmic/pycosie", - "avatar": "https://avatars.githubusercontent.com/u/23317602?v=4", - "description": "pycosie (pie cozy) is a complimentary suite of analyses software written in Python meant to be analyzed on Technicolor Dawn and quasarcosie outputs. It is the Pyhton derivative of ARCOSIE.", + "uid": "github/sharmalab/eaglescope", + "url": "https://github.com/sharmalab/eaglescope", + "rel": "/software/repository/github/sharmalab/eaglescope", + "avatar": "https://avatars.githubusercontent.com/u/16709393?v=4", + "description": "Hierarchical and Cohort Visualization", "topics": [] }, { - "uid": "github/skiehl/wwz", - "url": "https://github.com/skiehl/wwz", - "rel": "/software/repository/github/skiehl/wwz", - "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", - "description": "Weighted wavelet z-transform (WWZ) analysis package", - "topics": [] + "uid": "github/anugrahjo/PySLSQP", + "url": "https://github.com/anugrahjo/PySLSQP", + "rel": "/software/repository/github/anugrahjo/PySLSQP", + "avatar": "https://avatars.githubusercontent.com/u/44123535?v=4", + "description": "A transparent Python interface to the SLSQP optimization algorithm, with advanced features and visualization capabilities.", + "topics": [ + "nonlinear-optimization", + "optimization", + "optimization-algorithms", + "slsqp" + ] }, { - "uid": "github/skiehl/polarizationtools", - "url": "https://github.com/skiehl/polarizationtools", - "rel": "/software/repository/github/skiehl/polarizationtools", - "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", - "description": "Tools to deal with astrophysical polarization data in python3", + "uid": "github/nonlocalmodels/NLMech", + "url": "https://github.com/nonlocalmodels/NLMech", + "rel": "/software/repository/github/nonlocalmodels/NLMech", + "avatar": "https://avatars.githubusercontent.com/u/52047777?v=4", + "description": "Implementation of finite element and finite difference approximation of Nonlocal models", "topics": [ - "astrophysics", - "blazar", - "polarization", - "randomwalk", - "stochastic-processes", - "stokes-parameters", - "time-series-analysis", - "evpa", - "evpa-rotation" + "computational-mechanics", + "peridynamics", + "fracture", + "nonlocalmodels" ] }, { - "uid": "github/skiehl/lcsim", - "url": "https://github.com/skiehl/lcsim", - "rel": "/software/repository/github/skiehl/lcsim", - "avatar": "https://avatars.githubusercontent.com/u/30414994?v=4", - "description": "Blazar light curve simulation package", + "uid": "github/supsi-dacd-isaac/BayesReconPy", + "url": "https://github.com/supsi-dacd-isaac/BayesReconPy", + "rel": "/software/repository/github/supsi-dacd-isaac/BayesReconPy", + "avatar": "https://avatars.githubusercontent.com/u/11190202?v=4", + "description": "Bayesian Reconciliation for Hierarchical Forecasting", + "topics": [] + }, + { + "uid": "github/aothmane-control/Algebraic-differentiators", + "url": "https://github.com/aothmane-control/Algebraic-differentiators", + "rel": "/software/repository/github/aothmane-control/Algebraic-differentiators", + "avatar": "https://avatars.githubusercontent.com/u/22243006?v=4", + "description": "A Python class implementing all necessary tools for the design, analysis, and discretization of algebraic differentiators. An interface to Matlab is also provided.", "topics": [] }, { - "uid": "github/florisvb/PyNumDiff", - "url": "https://github.com/florisvb/PyNumDiff", - "rel": "/software/repository/github/florisvb/PyNumDiff", - "avatar": "https://avatars.githubusercontent.com/u/246332?v=4", - "description": "Methods for numerical differentiation of noisy data in python", + "uid": "github/HalHaggard/EARL", + "url": "https://github.com/HalHaggard/EARL", + "rel": "/software/repository/github/HalHaggard/EARL", + "avatar": "https://avatars.githubusercontent.com/u/35935417?v=4", + "description": "Exoplanet Analytic Reflected Lightcurves (EARL): This Mathematica code allows you to compute the analytic form of a reflected lightcurve given a spherical harmonic decomposition of the planet albedo map and the viewing and orbital geometries. The theoretical foundation for this code is laid out in the paper \"Analytic Reflected Lightcurves for Exoplanets\" by Hal M. Haggard and Nicolas B. Cowan, which can be found the arXiv.", "topics": [] }, { - "uid": "github/sjvrijn/mf2", - "url": "https://github.com/sjvrijn/mf2", - "rel": "/software/repository/github/sjvrijn/mf2", - "avatar": "https://avatars2.githubusercontent.com/u/8833517?v=4", - "description": "Collection of Multi-Fidelity benchmark functions", + "uid": "github/Valires/er-evaluation", + "url": "https://github.com/Valires/er-evaluation", + "rel": "/software/repository/github/Valires/er-evaluation", + "avatar": "https://avatars.githubusercontent.com/u/128562477?v=4", + "description": "An End-to-End Evaluation Framework for Entity Resolution Systems", "topics": [ - "multi-fidelity", - "benchmark-functions", - "benchmark-suite", - "benchmarking-suite", - "python" + "data-science", + "deduplication", + "disambiguation", + "duplicate-detection", + "entity-resolution", + "evaluation", + "fuzzy-matching", + "matching", + "ml-evaluation", + "ml-testing", + "record-linkage", + "statistics", + "inventor-name-disambiguation", + "author-name-disambiguation" ] }, { - "uid": "github/Wimmics/olivaw", - "url": "https://github.com/Wimmics/olivaw", - "rel": "/software/repository/github/Wimmics/olivaw", - "avatar": "https://avatars.githubusercontent.com/u/12628018?v=4", - "description": "Python framework for Agile ontology development support to be used with command lines with pre-commit or GitHub Actions", + "uid": "github/synchrofit/synchrofit", + "url": "https://github.com/synchrofit/synchrofit", + "rel": "/software/repository/github/synchrofit/synchrofit", + "avatar": "https://avatars.githubusercontent.com/u/79506129?v=4", + "description": "Code for modelling a radio spectrum using the JP, KP or CI models. ", + "topics": [] + }, + { + "uid": "github/jakelangham/kestrel", + "url": "https://github.com/jakelangham/kestrel", + "rel": "/software/repository/github/jakelangham/kestrel", + "avatar": "https://avatars.githubusercontent.com/u/46025329?v=4", + "description": "Software for simulations of sediment-laden Earth surface flows", "topics": [ - "ontology", - "semantics", - "linked-data", - "owl", - "rdf", - "rdfs", - "schema", - "shacl", - "sparql", - "validation", - "vocabulary" + "debris-flow", + "fluid-simulation", + "geophysical-fluid-dynamics", + "granular-flow", + "morphodynamics", + "natural-hazards-modelling", + "shallow-water-equations" ] }, { - "uid": "github/GabrieleParimbelli/COLIBRI", - "url": "https://github.com/GabrieleParimbelli/COLIBRI", - "rel": "/software/repository/github/GabrieleParimbelli/COLIBRI", - "avatar": "https://avatars.githubusercontent.com/u/43963112?v=4", - "description": "Cosmology libraries in Python", + "uid": "github/yfperezg/frisbhee", + "url": "https://github.com/yfperezg/frisbhee", + "rel": "/software/repository/github/yfperezg/frisbhee", + "avatar": "https://avatars.githubusercontent.com/u/50493467?v=4", + "description": null, "topics": [] }, { - "uid": "github/gerlero/foamlib", - "url": "https://github.com/gerlero/foamlib", - "rel": "/software/repository/github/gerlero/foamlib", - "avatar": "https://avatars.githubusercontent.com/u/15150530?v=4", - "description": "A modern Python package for interacting with OpenFOAM", + "uid": "github/glue-viz/glue", + "url": "https://github.com/glue-viz/glue", + "rel": "/software/repository/github/glue-viz/glue", + "avatar": "https://avatars.githubusercontent.com/u/1926209?v=4", + "description": "Linked Data Visualizations Across Multiple Files", "topics": [ - "asyncio", - "openfoam", - "parsing", "python", - "cases", - "dictionaries", - "fields", - "files", - "slurm" + "visualization", + "data-science", + "linked-data" ] }, { - "uid": "github/scottleedavis/googleearthtoolbox", - "url": "https://github.com/scottleedavis/google-earth-toolbox", - "rel": "/software/repository/github/scottleedavis/googleearthtoolbox", - "avatar": "https://avatars0.githubusercontent.com/u/2914443?v=4", - "description": "Leverages the intuitive interactive virtual globe interface provided by Google Earth, providing programatic tools useful in spatio-temporal analysis.", + "uid": "github/gtw2i/GA-Galaxy", + "url": "https://github.com/gtw2i/GA-Galaxy", + "rel": "/software/repository/github/gtw2i/GA-Galaxy", + "avatar": "https://avatars.githubusercontent.com/u/20209148?v=4", + "description": null, "topics": [] }, { - "uid": "github/bihealth/sodar_core", - "url": "https://github.com/bihealth/sodar_core", - "rel": "/software/repository/github/bihealth/sodar_core", - "avatar": "https://avatars1.githubusercontent.com/u/11364301?v=4", - "description": "Django-based framework for building scientific data management web apps.", + "uid": "github/ExoplanetML/Nigraha", + "url": "https://github.com/ExoplanetML/Nigraha", + "rel": "/software/repository/github/ExoplanetML/Nigraha", + "avatar": "https://avatars.githubusercontent.com/u/77851194?v=4", + "description": "A neural network based pipeline to identify and evaluate planet candidates from TESS light curves.", "topics": [] }, { - "uid": "github/mpiersonsmela/SeqVerify", - "url": "https://github.com/mpiersonsmela/SeqVerify", - "rel": "/software/repository/github/mpiersonsmela/SeqVerify", - "avatar": "https://avatars.githubusercontent.com/u/62316569?v=4", - "description": "Analyzes whole genome sequencing data for gene-editing verification", + "uid": "github/mahulchak/quickmerge", + "url": "https://github.com/mahulchak/quickmerge", + "rel": "/software/repository/github/mahulchak/quickmerge", + "avatar": "https://avatars.githubusercontent.com/u/7537640?v=4", + "description": "A simple and fast metassembler and assembly gap filler designed for long molecule based assemblies.", "topics": [] }, { - "uid": "github/EHTJulia/ScatteringOptics.jl", - "url": "https://github.com/EHTJulia/ScatteringOptics.jl", - "rel": "/software/repository/github/EHTJulia/ScatteringOptics.jl", - "avatar": "https://avatars.githubusercontent.com/u/102935150?v=4", - "description": "A Julia package to simulate and model interstellar scattering in strong regime.", + "uid": "github/adamgayoso/totalVI_reproducibility", + "url": "https://github.com/adamgayoso/totalVI_reproducibility", + "rel": "/software/repository/github/adamgayoso/totalVI_reproducibility", + "avatar": "https://avatars.githubusercontent.com/u/10859440?v=4", + "description": null, "topics": [] }, { - "uid": "github/rajewsky-lab/spacemake", - "url": "https://github.com/rajewsky-lab/spacemake", - "rel": "/software/repository/github/rajewsky-lab/spacemake", - "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", - "description": null, - "topics": [] + "uid": "github/marberts/piar", + "url": "https://github.com/marberts/piar", + "rel": "/software/repository/github/marberts/piar", + "avatar": "https://avatars.githubusercontent.com/u/62676717?v=4", + "description": "Price index aggregation in R", + "topics": [ + "cran", + "economics", + "r", + "r-package", + "statistics", + "rstats", + "inflation", + "official-statistics" + ] }, { - "uid": "github/rajewsky-lab/dropbead", - "url": "https://github.com/rajewsky-lab/dropbead", - "rel": "/software/repository/github/rajewsky-lab/dropbead", - "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", - "description": "Basic Exploration and Analysis of Drop-seq Data", + "uid": "github/tesselle/aion", + "url": "https://github.com/tesselle/aion", + "rel": "/software/repository/github/tesselle/aion", + "avatar": "https://avatars.githubusercontent.com/u/78033555?v=4", + "description": ":stopwatch: Archaeological Time Series", + "topics": [ + "archaeological-science", + "archaeology", + "r-package", + "chronology", + "time-series" + ] + }, + { + "uid": "github/Maison-de-la-Simulation/heraclespp", + "url": "https://github.com/Maison-de-la-Simulation/heraclespp", + "rel": "/software/repository/github/Maison-de-la-Simulation/heraclespp", + "avatar": "https://avatars.githubusercontent.com/u/60662067?v=4", + "description": "HERACLES++ is a hydrodynamic code with a moving grid, designed to run on different architectures using Kokkos.", "topics": [] }, { - "uid": "github/rajewsky-lab/novosparc", - "url": "https://github.com/rajewsky-lab/novosparc", - "rel": "/software/repository/github/rajewsky-lab/novosparc", - "avatar": "https://avatars.githubusercontent.com/u/17617158?v=4", + "uid": "github/epic-astronomy/EPIC", + "url": "https://github.com/epic-astronomy/EPIC", + "rel": "/software/repository/github/epic-astronomy/EPIC", + "avatar": "https://avatars.githubusercontent.com/u/49343403?v=4", "description": null, "topics": [] }, { - "uid": "github/r3w0p/bobocep", - "url": "https://github.com/r3w0p/bobocep", - "rel": "/software/repository/github/r3w0p/bobocep", - "avatar": "https://avatars.githubusercontent.com/u/23155844?v=4", - "description": "A fault-tolerant Complex Event Processing engine designed for edge computing in Internet of Things systems.", + "uid": "github/MarkusPic/intensity_duration_frequency_analysis", + "url": "https://github.com/MarkusPic/intensity_duration_frequency_analysis", + "rel": "/software/repository/github/MarkusPic/intensity_duration_frequency_analysis", + "avatar": "https://avatars.githubusercontent.com/u/11568131?v=4", + "description": "heavy rain as a function of the duration and the return period acc. to DWA-A 531 (2012) This program reads the measurement data of the rainfall and calculates the distribution of the rainfall as a function of the return period and the duration for duration steps up to 12 hours (and more) and return period in a range of '0.5a <= T_n <= 100a'", "topics": [ - "internet-of-things", - "complex-event-processing", - "edge-computing", - "fault-tolerance", - "distributed-systems" + "heavy-rain", + "idf", + "intensity-duration-frequency", + "design-rainfall", + "rainfall", + "precipitation", + "analysis", + "duration", + "dwa", + "measurement-data", + "duration-steps", + "return-period", + "dwa-a-531", + "kostra", + "dwd", + "python" ] }, { - "uid": "github/rbrthogan/GAz", - "url": "https://github.com/rbrthogan/GAz", - "rel": "/software/repository/github/rbrthogan/GAz", - "avatar": "https://avatars.githubusercontent.com/u/9214671?v=4", - "description": "A genetic algorithm that finds optimal polynomial form to fit to data. ", - "topics": [] - }, - { - "uid": "github/Kamuish/archi", - "url": "https://github.com/Kamuish/archi", - "rel": "/software/repository/github/Kamuish/archi", - "avatar": "https://avatars.githubusercontent.com/u/33263706?v=4", - "description": "Pipeline to study CHEOPS background stars", + "uid": "github/BEAST-Fitting/beast", + "url": "https://github.com/BEAST-Fitting/beast", + "rel": "/software/repository/github/BEAST-Fitting/beast", + "avatar": "https://avatars.githubusercontent.com/u/2017911?v=4", + "description": "Bayesian Extinction And Stellar Tool", "topics": [ - "python", + "astronomy", + "stars", + "dust", + "fitting", + "bayesian", + "astrophysics", "hacktoberfest" ] }, { - "uid": "github/andersdot/photoParallax", - "url": "https://github.com/andersdot/photoParallax", - "rel": "/software/repository/github/andersdot/photoParallax", - "avatar": "https://avatars.githubusercontent.com/u/2364711?v=4", - "description": "data-driven photometric parallaxes, built with Gaia and 2MASS", - "topics": [] - }, - { - "uid": "github/rezeebe/orbitN", - "url": "https://github.com/rezeebe/orbitN", - "rel": "/software/repository/github/rezeebe/orbitN", - "avatar": "https://avatars.githubusercontent.com/u/89117187?v=4", - "description": "Symplectic integrator for near-Keplerian planetary systems", - "topics": [] - }, - { - "uid": "github/PieterjanRobbe/GaussianRandomFields.jl", - "url": "https://github.com/PieterjanRobbe/GaussianRandomFields.jl", - "rel": "/software/repository/github/PieterjanRobbe/GaussianRandomFields.jl", - "avatar": "https://avatars.githubusercontent.com/u/15999604?v=4", - "description": "A package for Gaussian random field generation in Julia", - "topics": [] + "uid": "github/Varnani/pywd2015-qt5", + "url": "https://github.com/Varnani/pywd2015-qt5", + "rel": "/software/repository/github/Varnani/pywd2015-qt5", + "avatar": "https://avatars.githubusercontent.com/u/32557144?v=4", + "description": "A Qt5 GUI written in Python for Wilson - Devinney eclipsing binary modeling software.", + "topics": [ + "pyqt5", + "astronomy", + "astrophysics", + "python3", + "python27", + "binary-stars" + ] }, { - "uid": "github/dirostri/CREPE", - "url": "https://github.com/dirostri/CREPE", - "rel": "/software/repository/github/dirostri/CREPE", - "avatar": "https://avatars.githubusercontent.com/u/46599183?v=4", - "description": "GitHub Repository for CREPE: A tool for Transcription Factor Cataloguing", - "topics": [] + "uid": "github/marcelm/dnaio", + "url": "https://github.com/marcelm/dnaio", + "rel": "/software/repository/github/marcelm/dnaio", + "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", + "description": "Read and write FASTQ and FASTA efficiently from Python", + "topics": [ + "python", + "bioinformatics" + ] }, { - "uid": "github/heli-xu/findSVI", - "url": "https://github.com/heli-xu/findSVI", - "rel": "/software/repository/github/heli-xu/findSVI", - "avatar": "https://avatars.githubusercontent.com/u/91294567?v=4", - "description": "Calculate CDC/ATSDR Social Vulnerability Index", + "uid": "github/marcelm/tinyalign", + "url": "https://github.com/marcelm/tinyalign", + "rel": "/software/repository/github/marcelm/tinyalign", + "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", + "description": "numerical representation of differences between strings", "topics": [] }, { - "uid": "github/agnesbrnb/MetIDfyR", - "url": "https://github.com/agnesbrnb/MetIDfyR", - "rel": "/software/repository/github/agnesbrnb/MetIDfyR", - "avatar": "https://avatars.githubusercontent.com/u/44233550?v=4", - "description": "MetIDfyR, an open-source and easy to use R script to predict and detect metabolites in mass spectrometry data", + "uid": "github/marcelm/alignlib", + "url": "https://github.com/marcelm/tinyalign", + "rel": "/software/repository/github/marcelm/alignlib", + "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", + "description": "edit and Hamming distances for biological sequences", "topics": [] }, { - "uid": "github/anuradhawick/LRBinner", - "url": "https://github.com/anuradhawick/LRBinner", - "rel": "/software/repository/github/anuradhawick/LRBinner", - "avatar": "https://avatars.githubusercontent.com/u/9621844?v=4", - "description": "LRBinner is a long-read binning tool published in WABI 2021 proceedings and AMB.", + "uid": "github/marcelm/cutadapt", + "url": "https://github.com/marcelm/cutadapt", + "rel": "/software/repository/github/marcelm/cutadapt", + "avatar": "https://avatars.githubusercontent.com/u/724864?v=4", + "description": "finds and removes adapter sequences, primers, poly-A tails and other types of unwanted sequence from your high-throughput sequencing reads.", "topics": [ - "bioinformatics", - "metagenomics", - "metagenomic-analysis", - "metagenomics-binning", "python", - "pacbio", - "nanopore-sequencing" + "bioinformatics" ] }, { - "uid": "github/sparks-baird/xtal2png", - "url": "https://github.com/sparks-baird/xtal2png", - "rel": "/software/repository/github/sparks-baird/xtal2png", - "avatar": "https://avatars.githubusercontent.com/u/71920635?v=4", - "description": "Encode/decode a crystal structure to/from a grayscale PNG image for direct use with image-based machine learning models such as Palette.", - "topics": [ - "crystallography", - "image-processing", - "machine-learning", - "materials-informatics", - "python", - "materials-science" - ] + "uid": "github/KiranLDA/PAMLr", + "url": "https://github.com/KiranLDA/PAMLr", + "rel": "/software/repository/github/KiranLDA/PAMLr", + "avatar": "https://avatars.githubusercontent.com/u/15142638?v=4", + "description": "Pressure, Activity, Magnetism and Light data analysis in R", + "topics": [] }, { - "uid": "github/pymedphys/pymedphys", - "url": "https://github.com/pymedphys/pymedphys", - "rel": "/software/repository/github/pymedphys/pymedphys", - "avatar": "https://avatars.githubusercontent.com/u/47132275?v=4", - "description": "A community effort to develop an open standard library for Medical Physics in Python. Building quality transparent software together via peer review and open source distribution. Open code is better science.", + "uid": "github/sanctuuary/ape", + "url": "https://github.com/sanctuuary/APE", + "rel": "/software/repository/github/sanctuuary/ape", + "avatar": "https://avatars.githubusercontent.com/u/58854891?v=4", + "description": "APE (Automated Pipeline Explorer)", "topics": [ - "medical-physics", - "dicom", - "radiation-oncology", - "radiation-therapy", - "radiation-physics", - "radiotherapy" + "automated-pipeline", + "workflow-synthesis", + "program-synthesis", + "java" ] }, { - "uid": "github/alawryaguila/multi-view-AE", - "url": "https://github.com/alawryaguila/multi-view-AE", - "rel": "/software/repository/github/alawryaguila/multi-view-AE", - "avatar": "https://avatars.githubusercontent.com/u/47194980?v=4", - "description": null, + "uid": "github/linDing-groups/Deep-4mCW2V", + "url": "https://github.com/linDing-groups/Deep-4mCW2V", + "rel": "/software/repository/github/linDing-groups/Deep-4mCW2V", + "avatar": "https://avatars.githubusercontent.com/u/72026915?v=4", + "description": "A sequence-based deep learning approach to predict N4-methylcytosine sites in Escherichia coli ", "topics": [] }, { - "uid": "github/chenwuperth/rgz_rcnn", - "url": "https://github.com/chenwuperth/rgz_rcnn", - "rel": "/software/repository/github/chenwuperth/rgz_rcnn", - "avatar": "https://avatars.githubusercontent.com/u/2968262?v=4", - "description": "ClaRAN: A deep learning classifier for radio morphologies", + "uid": "github/EMBL-Hentze-group/htseq-clip", + "url": "https://github.com/EMBL-Hentze-group/htseq-clip", + "rel": "/software/repository/github/EMBL-Hentze-group/htseq-clip", + "avatar": "https://avatars.githubusercontent.com/u/55585244?v=4", + "description": "a toolset designed for the processing and analysis of eCLIP/iCLIP dataset", "topics": [ - "radio-sources", - "radio-morphologies", - "machine-learning", - "morphology", - "deep-learning", - "computer-vision", - "faster-rcnn" + "bioinformatics", + "ngs-analysis", + "eclip" ] }, { - "uid": "github/davideamato/NAPLES", - "url": "https://github.com/davideamato/NAPLES", - "rel": "/software/repository/github/davideamato/NAPLES", - "avatar": "https://avatars.githubusercontent.com/u/50680451?v=4", - "description": "NAPLES (Numerical Analysis of PLanetary EncounterS) is a Fortran code for the numerical analysis of close encounters in the Circular, Restricted Three-Body Problem using regularized formulations.", + "uid": "github/Tarskin/LaCyTools", + "url": "https://github.com/Tarskin/LaCyTools", + "rel": "/software/repository/github/Tarskin/LaCyTools", + "avatar": "https://avatars.githubusercontent.com/u/4366212?v=4", + "description": "A high-throughput data extraction package for LC-MS data.", "topics": [] }, { - "uid": "github/perfanalytics/pose2sim", - "url": "https://github.com/perfanalytics/pose2sim", - "rel": "/software/repository/github/perfanalytics/pose2sim", - "avatar": "https://avatars.githubusercontent.com/u/106652625?v=4", - "description": "Markerless kinematics, from OpenPose to OpenSim", - "topics": [ - "kinematics", - "markerless", - "openpose", - "opensim", - "3d-kinematics", - "biomechanics", - "motion-capture", - "pose-estimation", - "sports" - ] - }, - { - "uid": "github/nf-core/viralrecon", - "url": "https://github.com/nf-core/viralrecon", - "rel": "/software/repository/github/nf-core/viralrecon", - "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", - "description": "Assembly and intrahost/low-frequency variant calling for viral samples", - "topics": [ - "viral", - "metagenomics", - "amplicon", - "assembly", - "variant-calling", - "illumina", - "pipeline", - "workflow", - "nextflow", - "nf-core", - "covid-19", - "covid19", - "virus", - "sars-cov-2", - "nanopore", - "ont", - "artic", - "long-read-sequencing", - "oxford-nanopore" - ] + "uid": "github/CompiledAtBirth/pyCARPool", + "url": "https://github.com/CompiledAtBirth/pyCARPool", + "rel": "/software/repository/github/CompiledAtBirth/pyCARPool", + "avatar": "https://avatars.githubusercontent.com/u/47000650?v=4", + "description": null, + "topics": [] }, { - "uid": "github/nf-core/sarek", - "url": "https://github.com/nf-core/sarek", - "rel": "/software/repository/github/nf-core/sarek", - "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", - "description": "Analysis pipeline to detect germline or somatic variants (pre-processing, variant calling and annotation) from WGS / targeted sequencing", - "topics": [ - "nextflow", - "workflow", - "pipeline", - "bioinformatics", - "genomics", - "cancer", - "next-generation-sequencing", - "conda", - "reproducible-research", - "containers", - "germline", - "somatic", - "variant-calling", - "nf-core", - "gatk4", - "annotation", - "whole-genome-sequencing", - "whole-exome-sequencing", - "pre-processing", - "target-panels" + "uid": "github/Aarhus-Psychiatry-Research/timeseriesflattener", + "url": "https://github.com/Aarhus-Psychiatry-Research/timeseriesflattener", + "rel": "/software/repository/github/Aarhus-Psychiatry-Research/timeseriesflattener", + "avatar": "https://avatars.githubusercontent.com/u/81359711?v=4", + "description": "A package for converting irregularly spaced time series, such as eletronic health records, into statically shaped dataframes. ", + "topics": [ + "electronic-healthcare-data", + "machine-learning", + "time-series-analysis", + "irregular-time-series", + "python", + "python3" ] }, { - "uid": "github/nf-core/proteinfamilies", - "url": "https://github.com/nf-core/proteinfamilies", - "rel": "/software/repository/github/nf-core/proteinfamilies", - "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", - "description": "Generation and update of protein families", + "uid": "github/ctSkennerton/minced", + "url": "https://github.com/ctSkennerton/minced", + "rel": "/software/repository/github/ctSkennerton/minced", + "avatar": "https://avatars.githubusercontent.com/u/685235?v=4", + "description": "Mining CRISPRs in Environmental Datasets", "topics": [ "bioinformatics", - "metagenomics", - "nextflow", - "nf-core", - "pipeline", - "protein-families", - "proteomics", - "workflow" + "crispr" ] }, { - "uid": "github/nf-core/airrflow", - "url": "https://github.com/nf-core/airrflow", - "rel": "/software/repository/github/nf-core/airrflow", - "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", - "description": "B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework", + "uid": "github/ctSkennerton/crass", + "url": "https://github.com/ctSkennerton/crass", + "rel": "/software/repository/github/ctSkennerton/crass", + "avatar": "https://avatars.githubusercontent.com/u/685235?v=4", + "description": "Crass is designed to identify and reconstruct CRISPR loci from raw metagenomic data without the need for assembly or prior knowledge of CRISPR in the data set.", "topics": [ - "b-cell", - "immcantation", - "immunorepertoire", - "repseq", - "nf-core", - "nextflow", - "workflow", - "pipeline", - "airr" + "crispr", + "bioinformatics" ] }, { - "uid": "github/nf-core/mag", - "url": "https://github.com/nf-core/mag", - "rel": "/software/repository/github/nf-core/mag", - "avatar": "https://avatars.githubusercontent.com/u/35520196?v=4", - "description": "Assembly and binning of metagenomes", - "topics": [ - "workflow", - "nextflow", - "metagenomics", - "assembly", - "binning", - "annotation", - "nf-core", - "pipeline", - "bioinformatics", - "nanopore", - "nanopore-sequencing", - "metagenomes", - "long-read-sequencing" - ] + "uid": "github/nabeelre/NIMBLE", + "url": "https://github.com/nabeelre/NIMBLE", + "rel": "/software/repository/github/nabeelre/NIMBLE", + "avatar": "https://avatars.githubusercontent.com/u/33795390?v=4", + "description": "A spherical Jeans modeling tool to compute a system's cumulative mass distribution from (observationally biased) 6D phase space coordinates", + "topics": [] }, { - "uid": "github/muLAn-project/muLAn", - "url": "https://github.com/muLAn-project/muLAn", - "rel": "/software/repository/github/muLAn-project/muLAn", - "avatar": "https://avatars.githubusercontent.com/u/29952484?v=4", - "description": "muLAn: MICROlensing Analysis software", + "uid": "github/nabeelre/BTSbot", + "url": "https://github.com/nabeelre/BTSbot", + "rel": "/software/repository/github/nabeelre/BTSbot", + "avatar": "https://avatars.githubusercontent.com/u/33795390?v=4", + "description": "Automated identification of supernovae with multi-modal deep learning", "topics": [ - "microlensing", - "modelling", "astronomy", - "science" + "astrophysics", + "computer-vision", + "time-domain-astronomy", + "transient-astronomy", + "ztf" ] }, { - "uid": "github/UoMMIB/TFBMiner", - "url": "https://github.com/UoMMIB/TFBMiner", - "rel": "/software/repository/github/UoMMIB/TFBMiner", - "avatar": "https://avatars.githubusercontent.com/u/65022631?v=4", - "description": "TFBMiner is a data acquisition and analysis pipeline for the rapid identification of putative transcription factor-based biosensors.", - "topics": [] - }, - { - "uid": "github/nickrodd/HDMSpectra", - "url": "https://github.com/nickrodd/HDMSpectra", - "rel": "/software/repository/github/nickrodd/HDMSpectra", - "avatar": "https://avatars.githubusercontent.com/u/13380467?v=4", - "description": "Dark Matter Spectra from the Electroweak to the Planck Scale", + "uid": "github/nyusngroup/pyMCZ", + "url": "https://github.com/nyusngroup/pyMCZ", + "rel": "/software/repository/github/nyusngroup/pyMCZ", + "avatar": "https://avatars.githubusercontent.com/u/8115653?v=4", + "description": "montecarlo sampling method to calculate metalicity from flux data", "topics": [] }, { - "uid": "github/vgl-hub/gfastats", - "url": "https://github.com/vgl-hub/gfastats", - "rel": "/software/repository/github/vgl-hub/gfastats", - "avatar": "https://avatars.githubusercontent.com/u/53915985?v=4", - "description": "A single fast and exhaustive tool for summary statistics and simultaneous *fa* (fasta, fastq, gfa [.gz]) genome assembly file manipulation.", + "uid": "github/niceume/datasailr", + "url": "https://github.com/niceume/datasailr", + "rel": "/software/repository/github/niceume/datasailr", + "avatar": "https://avatars.githubusercontent.com/u/2307095?v=4", + "description": "Base repository for DataSailr R package, which enables row by row data manipulation. To build and/or develop DataSailr R package, use datasailr_toolchain repository.", "topics": [] }, { - "uid": "github/wlloyduw/ContainerProfiler", - "url": "https://github.com/wlloyduw/ContainerProfiler", - "rel": "/software/repository/github/wlloyduw/ContainerProfiler", - "avatar": "https://avatars.githubusercontent.com/u/25626906?v=4", + "uid": "github/rinikerlab/Ensembler", + "url": "https://github.com/rinikerlab/Ensembler", + "rel": "/software/repository/github/rinikerlab/Ensembler", + "avatar": "https://avatars.githubusercontent.com/u/48841290?v=4", "description": null, "topics": [] }, { - "uid": "github/mp3guy/ElasticFusion", - "url": "https://github.com/mp3guy/ElasticFusion", - "rel": "/software/repository/github/mp3guy/ElasticFusion", - "avatar": "https://avatars.githubusercontent.com/u/3238631?v=4", - "description": "Real-time dense visual SLAM system", + "uid": "github/astrockragh/Mangrove", + "url": "https://github.com/astrockragh/Mangrove", + "rel": "/software/repository/github/astrockragh/Mangrove", + "avatar": "https://avatars.githubusercontent.com/u/47056775?v=4", + "description": "Using Graph Neural Networks to regress baryonic properties directly from full dark matter merger trees.", "topics": [ - "slam", - "cuda", - "reconstruction" + "astrophysics", + "gnn", + "graphs" ] }, { - "uid": "github/rhayes777/PyAutoFit", - "url": "https://github.com/rhayes777/PyAutoFit", - "rel": "/software/repository/github/rhayes777/PyAutoFit", - "avatar": "https://avatars.githubusercontent.com/u/6361906?v=4", - "description": null, + "uid": "github/hytrac/amber", + "url": "https://github.com/hytrac/amber", + "rel": "/software/repository/github/hytrac/amber", + "avatar": "https://avatars.githubusercontent.com/u/26089602?v=4", + "description": "The Abundance Matching Box for the Epoch of Reionization (AMBER) is a semi-numerical code for modeling the cosmic dawn and reionization.", "topics": [] }, { - "uid": "github/iraf-community/pyraf", - "url": "https://github.com/iraf-community/pyraf", - "rel": "/software/repository/github/iraf-community/pyraf", - "avatar": "https://avatars.githubusercontent.com/u/39551906?v=4", - "description": "Command language for IRAF based on Python.", + "uid": "github/JuliaDynamics/TransitionsInTimeseries.jl", + "url": "https://github.com/JuliaDynamics/TransitionsInTimeseries.jl", + "rel": "/software/repository/github/JuliaDynamics/TransitionsInTimeseries.jl", + "avatar": "https://avatars.githubusercontent.com/u/31774341?v=4", + "description": "Transition Indicators / Early Warning Signals / Regime Shifts / Change Point Detection", "topics": [ - "iraf", - "python", - "astronomy", - "pyraf" + "critical-transitions", + "early-warning-signals", + "nonlinear-dynamics", + "nonlinear-timeseries-analysis", + "tipping-points", + "hacktoberfest", + "change-point-detection", + "critical-slowing-down", + "resilience-loss" ] }, { - "uid": "github/iraf-community/iraf", - "url": "https://github.com/iraf-community/iraf", - "rel": "/software/repository/github/iraf-community/iraf", - "avatar": "https://avatars.githubusercontent.com/u/39551906?v=4", - "description": "IRAF - Image Reduction and Analysis Facility", + "uid": "github/JuliaDynamics/TimeseriesSurrogates.jl", + "url": "https://github.com/JuliaDynamics/TimeseriesSurrogates.jl", + "rel": "/software/repository/github/JuliaDynamics/TimeseriesSurrogates.jl", + "avatar": "https://avatars.githubusercontent.com/u/31774341?v=4", + "description": "A Julia library for generating surrogate data.", "topics": [ - "astronomy", - "iraf" + "timeseries", + "nonlinear-time-series", + "surrogate", + "surrogates", + "hacktoberfest", + "hypothesis-testing", + "julia" ] }, { - "uid": "github/TeamPerie/CellDestiny", - "url": "https://github.com/TeamPerie/CellDestiny", - "rel": "/software/repository/github/TeamPerie/CellDestiny", - "avatar": "https://avatars.githubusercontent.com/u/74544908?v=4", - "description": null, - "topics": [] + "uid": "github/JuliaDynamics/DrWatson.jl", + "url": "https://github.com/JuliaDynamics/DrWatson.jl", + "rel": "/software/repository/github/JuliaDynamics/DrWatson.jl", + "avatar": "https://avatars1.githubusercontent.com/u/31774341?v=4", + "description": "The perfect sidekick to your scientific inquiries", + "topics": [ + "science", + "science-research", + "project-management", + "project-assistant", + "simulations", + "setup-tool" + ] }, { - "uid": "github/kkrismer/scansite4", - "url": "https://github.com/kkrismer/scansite-tools", - "rel": "/software/repository/github/kkrismer/scansite4", - "avatar": "https://avatars.githubusercontent.com/u/9969612?v=4", - "description": "Scansite searches for motifs within proteins that are likely to be phosphorylated by specific protein kinases or bind to domains such as SH2 domains, 14-3-3 domains or PDZ domains.", + "uid": "github/user29A/fastrometry", + "url": "https://github.com/user29A/fastrometry", + "rel": "/software/repository/github/user29A/fastrometry", + "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", + "description": "Fast Automatic World Coordinate Solution Solver. See the github Wiki link below for more info.", "topics": [ - "gwt", - "computational-biology", - "bioinformatics", - "pwm", - "opls", - "yaffe-lab", - "koch-institute", - "mit" + "world-coordinate-solution", + "fits", + "fits-image", + "wcs" ] }, { - "uid": "github/AndreaCaldiroli/ATES-Code", - "url": "https://github.com/AndreaCaldiroli/ATES-Code", - "rel": "/software/repository/github/AndreaCaldiroli/ATES-Code", - "avatar": "https://avatars.githubusercontent.com/u/77735945?v=4", - "description": "The ATES hydrodynamics code computes the temperature, density, velocity and ionization fraction profiles of highly irradiated planetary atmospheres, along with the current, steady-state mass loss rate. ATES solves the one-dimensional Euler, mass and energy conservation equations in radial coordinates through a finite-volume scheme. The hydrodynamics module is paired with a photoionization equilibrium solver that includes cooling via bremsstrahlung, recombination and collisional excitation/ionization for the case of an atmosphere of primordial composition (i.e., pure atomic hydrogen-helium), while also accounting for advection of the different ion species.", - "topics": [] + "uid": "github/user29A/CCDLAB", + "url": "https://github.com/user29A/CCDLAB", + "rel": "/software/repository/github/user29A/CCDLAB", + "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", + "description": "FITS image interaction, world coordinate solving, point source extraction, photometry, etc. See the github Wiki link below for more info. If you require CCDLAB for UVIT, please ensure you have the UVIT Calibration Database which you can find at the CCDLAB Wiki link below.", + "topics": [ + "image-processing", + "fits", + "world-coordinates", + "fits-image", + "fits-files", + "fits-bintables", + "fits-image-sets", + "wcs-solver" + ] }, { - "uid": "github/alejandroaviles/fkpt", - "url": "https://github.com/alejandroaviles/fkpt", - "rel": "/software/repository/github/alejandroaviles/fkpt", - "avatar": "https://avatars.githubusercontent.com/u/10519363?v=4", - "description": "Perturbation theory with \"fk\"-Kernels", + "uid": "github/user29A/JPFITS", + "url": "https://github.com/user29A/JPFITS", + "rel": "/software/repository/github/user29A/JPFITS", + "avatar": "https://avatars.githubusercontent.com/u/40668405?v=4", + "description": "FITS File interaction written in Visual Studio C# .Net, compatible across all .Net platforms. JPFITS is not based on any other implementations and is written from the ground-up, consistent with the FITS standard, designed to interact with FITS files as object-oriented structures. See the github Wiki link below for more info.", + "topics": [ + "fits", + "fits-files", + "fits-image", + "fits-visualization", + "world-coordinates", + "world-coordinate-solution", + "point-source-extraction", + "bin-tables", + "fits-image-sets", + "astronomy", + "fitsharp", + "fitsio", + "fits-bintables" + ] + }, + { + "uid": "github/seap-udea/iWander", + "url": "https://github.com/seap-udea/iWander", + "rel": "/software/repository/github/seap-udea/iWander", + "avatar": "https://avatars.githubusercontent.com/u/11349479?v=4", + "description": "Dynamics of Interstellar Wanderers", "topics": [] }, { - "uid": "github/alicia-ziying-yang/conTEXT-explorer", - "url": "https://github.com/alicia-ziying-yang/conTEXT-explorer", - "rel": "/software/repository/github/alicia-ziying-yang/conTEXT-explorer", - "avatar": "https://avatars.githubusercontent.com/u/81403454?v=4", - "description": "ConTEXT Explorer is an open Web-based system for exploring and visualizing concepts (combinations of occurring words and phrases) over time in the text documents.", + "uid": "github/valerio-marra/CalPriorSNIa", + "url": "https://github.com/valerio-marra/CalPriorSNIa", + "rel": "/software/repository/github/valerio-marra/CalPriorSNIa", + "avatar": "https://avatars.githubusercontent.com/u/28807598?v=4", + "description": "Effective calibration prior on the absolute magnitude of Type Ia supernovae", "topics": [ - "data-science", - "data-visualization", - "data-analysis", - "nature-language-process", - "information-retrieval", - "webapp" + "supernovae", + "cosmology", + "wolfram-mathematica" ] }, { - "uid": "github/mikekatz04/BOWIE", - "url": "https://github.com/mikekatz04/BOWIE", - "rel": "/software/repository/github/mikekatz04/BOWIE", - "avatar": "https://avatars.githubusercontent.com/u/23559239?v=4", - "description": "BOWIE - Binary Observability With Illustrative Exploration", + "uid": "github/fred3m/toyz", + "url": "https://github.com/fred3m/toyz", + "rel": "/software/repository/github/fred3m/toyz", + "avatar": "https://avatars.githubusercontent.com/u/2251900?v=4", + "description": "Toyz for Data Analysis and Reduction", "topics": [] }, { - "uid": "github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", - "url": "https://github.com/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", - "rel": "/software/repository/github/Bishop-Laboratory/RLoop-QC-Meta-Analysis-Miller-2022", - "avatar": "https://avatars.githubusercontent.com/u/75179831?v=4", - "description": "Generates figures for \"Quality-controlled R-loop meta-analysis reveals the characteristics of R-loop consensus regions\"", + "uid": "github/rudeboybert/forestecology", + "url": "https://github.com/rudeboybert/forestecology", + "rel": "/software/repository/github/rudeboybert/forestecology", + "avatar": "https://avatars.githubusercontent.com/u/4574203?v=4", + "description": "forestecology R package of Methods and Data for Forest Ecology Model Fitting and Assessment", "topics": [ - "bioinformatics", - "r-loops" + "forestecology", + "tidyverse" ] }, { - "uid": "github/matthiasdemuzere/w2w", - "url": "https://github.com/matthiasdemuzere/w2w", - "rel": "/software/repository/github/matthiasdemuzere/w2w", - "avatar": "https://avatars.githubusercontent.com/u/6926916?v=4", - "description": "A python tool that ingests WUDAPT information into WRF.", - "topics": [] + "uid": "github/CEMeNT-PSAAP/MCDC", + "url": "https://github.com/CEMeNT-PSAAP/MCDC", + "rel": "/software/repository/github/CEMeNT-PSAAP/MCDC", + "avatar": "https://avatars.githubusercontent.com/u/69278530?v=4", + "description": "MC/DC: Monte Carlo Dynamic Code", + "topics": [ + "high-performance-computing", + "monte-carlo-simulation", + "neutron-transport", + "neutronics", + "nuclear-engineering", + "particle-transport", + "radiation-transport", + "parallel", + "python", + "simulation" + ] }, { - "uid": "github/radio-astro-tools/pvextractor", - "url": "https://github.com/radio-astro-tools/pvextractor", - "rel": "/software/repository/github/radio-astro-tools/pvextractor", - "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", - "description": "Position-Velocity diagram extract (but it can slice out other things too)", + "uid": "github/arcaldwell49/SimplyAgree", + "url": "https://github.com/arcaldwell49/SimplyAgree", + "rel": "/software/repository/github/arcaldwell49/SimplyAgree", + "avatar": "https://avatars.githubusercontent.com/u/24322628?v=4", + "description": "A simple R package for calculating absolute agreement and estimating required sample sizes for studies of absolute agreement", "topics": [] }, { - "uid": "github/radio-astro-tools/spectral-cube", - "url": "https://github.com/radio-astro-tools/spectral-cube", - "rel": "/software/repository/github/radio-astro-tools/spectral-cube", - "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", - "description": "Library for reading and analyzing astrophysical spectral data cubes", + "uid": "github/cosmo-epfl/chemiscope", + "url": "https://github.com/cosmo-epfl/chemiscope", + "rel": "/software/repository/github/cosmo-epfl/chemiscope", + "avatar": "https://avatars0.githubusercontent.com/u/7110305?v=4", + "description": "An interactive structure/property explorer for materials and molecules", "topics": [] }, { - "uid": "github/radio-astro-tools/uvcombine", - "url": "https://github.com/radio-astro-tools/uvcombine", - "rel": "/software/repository/github/radio-astro-tools/uvcombine", - "avatar": "https://avatars.githubusercontent.com/u/7228695?v=4", - "description": "Combine images made with different resolutions, including the \"feathering\" technique for interferometry data.", + "uid": "github/marieBvr/virAnnot", + "url": "https://github.com/marieBvr/virAnnot", + "rel": "/software/repository/github/marieBvr/virAnnot", + "avatar": "https://avatars2.githubusercontent.com/u/20929578?v=4", + "description": null, "topics": [] }, { - "uid": "github/BiostatOmics/MORE", - "url": "https://github.com/BiostatOmics/MORE", - "rel": "/software/repository/github/BiostatOmics/MORE", - "avatar": "https://avatars.githubusercontent.com/u/161608679?v=4", - "description": "Discover regulatory relationships for multi-omics data using regression models", + "uid": "github/raghuastro/GRIZZLY", + "url": "https://github.com/raghuastro/GRIZZLY", + "rel": "/software/repository/github/raghuastro/GRIZZLY", + "avatar": "https://avatars.githubusercontent.com/u/25389315?v=4", + "description": null, "topics": [] }, { - "uid": "github/BiostatOmics/Coxmos", - "url": "https://github.com/BiostatOmics/Coxmos", - "rel": "/software/repository/github/BiostatOmics/Coxmos", - "avatar": "https://avatars.githubusercontent.com/u/161608679?v=4", - "description": null, + "uid": "github/saigegit/SAIGE", + "url": "https://github.com/saigegit/SAIGE", + "rel": "/software/repository/github/saigegit/SAIGE", + "avatar": "https://avatars.githubusercontent.com/u/98546675?v=4", + "description": "Development for SAIGE and SAIGE-GENE(+)", "topics": [] }, { - "uid": "github/sheneman/clearcut", - "url": "https://github.com/sheneman/clearcut", - "rel": "/software/repository/github/sheneman/clearcut", - "avatar": "https://avatars.githubusercontent.com/u/3028345?v=4", - "description": "This is clearcut, the reference implementation for the Relaxed Neighbor Joining algorithm.", + "uid": "github/hydrosolutions/riversCentralAsia", + "url": "https://github.com/hydrosolutions/riversCentralAsia", + "rel": "/software/repository/github/hydrosolutions/riversCentralAsia", + "avatar": "https://avatars.githubusercontent.com/u/10865030?v=4", + "description": "Package with helper functions to load, manage and analyze hydrometeorological data from Central Asia", "topics": [] }, { - "uid": "github/aqlaboratory/openfold", - "url": "https://github.com/aqlaboratory/openfold", - "rel": "/software/repository/github/aqlaboratory/openfold", - "avatar": "https://avatars.githubusercontent.com/u/8396911?v=4", - "description": "Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2", + "uid": "github/HajkD/LTRpred", + "url": "https://github.com/HajkD/LTRpred", + "rel": "/software/repository/github/HajkD/LTRpred", + "avatar": "https://avatars3.githubusercontent.com/u/4355251?v=4", + "description": "De novo annotation of intact retrotransposons", "topics": [ - "pytorch", - "protein-structure", - "alphafold2" + "ltr", + "ltr-transposons", + "ltr-retrotransposons", + "genome", + "evolution", + "pipeline", + "diversification" ] }, { - "uid": "github/RadioAstronomySoftwareGroup/pyradiosky", - "url": "https://github.com/RadioAstronomySoftwareGroup/pyradiosky", - "rel": "/software/repository/github/RadioAstronomySoftwareGroup/pyradiosky", - "avatar": "https://avatars.githubusercontent.com/u/41453363?v=4", - "description": "Python objects and interfaces for representing diffuse, extended and compact astrophysical radio sources", + "uid": "github/vallis/mc3pta", + "url": "https://github.com/vallis/mc3pta", + "rel": "/software/repository/github/vallis/mc3pta", + "avatar": "https://avatars.githubusercontent.com/u/492720?v=4", + "description": "Bayesian-inference tools for pulsar-timing-array data", "topics": [] }, { - "uid": "github/RadioAstronomySoftwareGroup/pyuvdata", - "url": "https://github.com/RadioAstronomySoftwareGroup/pyuvdata", - "rel": "/software/repository/github/RadioAstronomySoftwareGroup/pyuvdata", - "avatar": "https://avatars.githubusercontent.com/u/41453363?v=4", - "description": "A pythonic interface for radio astronomy interferometry data (uvfits, miriad, others)", - "topics": [ - "python", - "astronomy", - "radio-astronomy", - "interferometry" - ] + "uid": "github/vallis/libstempo", + "url": "https://github.com/vallis/libstempo", + "rel": "/software/repository/github/vallis/libstempo", + "avatar": "https://avatars.githubusercontent.com/u/492720?v=4", + "description": "libstempo \u2014 a Python wrapper for tempo2", + "topics": [] }, { - "uid": "github/fbreitwieser/krakenuniq", - "url": "https://github.com/fbreitwieser/krakenuniq", - "rel": "/software/repository/github/fbreitwieser/krakenuniq", - "avatar": "https://avatars.githubusercontent.com/u/516060?v=4", - "description": "\ud83d\udc19 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results", - "topics": [ - "bioinformatics", - "metagenomics" - ] + "uid": "github/radiocosmology/caput", + "url": "https://github.com/radiocosmology/caput", + "rel": "/software/repository/github/radiocosmology/caput", + "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", + "description": "Cluster Astronomical Python Utilities", + "topics": [] }, { - "uid": "github/Chroma-CITI/namosim", - "url": "https://github.com/Chroma-CITI/namosim", - "rel": "/software/repository/github/Chroma-CITI/namosim", - "avatar": "https://avatars.githubusercontent.com/u/160138468?v=4", - "description": "A mobile-robot navigation planner for navigating among movable obstacles", + "uid": "github/radiocosmology/driftscan", + "url": "https://github.com/radiocosmology/driftscan", + "rel": "/software/repository/github/radiocosmology/driftscan", + "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", + "description": "Data analysis of transit radio interferometers, particularly for 21cm cosmology.", "topics": [] }, { - "uid": "github/ldliao/jointVIP", - "url": "https://github.com/ldliao/jointVIP", - "rel": "/software/repository/github/ldliao/jointVIP", - "avatar": "https://avatars.githubusercontent.com/u/22989630?v=4", - "description": "Prioritize variables in observational study design through the joint variable importance plot; shiny app: https://ldliao.shinyapps.io/jointVIP/", + "uid": "github/radiocosmology/draco", + "url": "https://github.com/radiocosmology/draco", + "rel": "/software/repository/github/radiocosmology/draco", + "avatar": "https://avatars.githubusercontent.com/u/6320724?v=4", + "description": "A pipeline for the analysis and simulation of drift scan radio data", "topics": [ - "causal-inference", - "observational-study", - "study-design", - "rstats", - "r" - ] - }, - { - "uid": "github/computproteomics/PolySTest", - "url": "https://github.com/computproteomics/PolySTest", - "rel": "/software/repository/github/computproteomics/PolySTest", - "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", - "description": "PolySTest: Statistical testing with missing values", - "topics": [] + "astrophysics", + "cosmology", + "radio-astronomy" + ] }, { - "uid": "github/computproteomics/ProteoMaker", - "url": "https://github.com/computproteomics/ProteoMaker", - "rel": "/software/repository/github/computproteomics/ProteoMaker", - "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", - "description": null, + "uid": "github/qiangyicheng/flory", + "url": "https://github.com/qiangyicheng/flory", + "rel": "/software/repository/github/qiangyicheng/flory", + "avatar": "https://avatars.githubusercontent.com/u/47470964?v=4", + "description": "Python package for finding coexisting phases in multicomponent mixtures.", "topics": [] }, { - "uid": "github/computproteomics/OmicsQ", - "url": "https://github.com/computproteomics/OmicsQ", - "rel": "/software/repository/github/computproteomics/OmicsQ", - "avatar": "https://avatars.githubusercontent.com/u/158178001?v=4", - "description": "OmicsQ: a toolkit for quantitative Omics analysis", + "uid": "github/osallou/cassiopee-c", + "url": "https://github.com/osallou/cassiopee-c", + "rel": "/software/repository/github/osallou/cassiopee-c", + "avatar": "https://avatars.githubusercontent.com/u/1024098?v=4", + "description": "Cassiopee index and search library C implementation", "topics": [] }, { - "uid": "github/jcolinhill/pyilc", - "url": "https://github.com/jcolinhill/pyilc", - "rel": "/software/repository/github/jcolinhill/pyilc", - "avatar": "https://avatars.githubusercontent.com/u/16061599?v=4", - "description": "Needlet ILC in Python", - "topics": [] + "uid": "github/gdrouart/MrMoose", + "url": "https://github.com/gdrouart/MrMoose", + "rel": "/software/repository/github/gdrouart/MrMoose", + "avatar": "https://avatars.githubusercontent.com/u/22902215?v=4", + "description": "MrMoose is a Spectral Energy Distribution fitting procedure using a Bayesian framework. In a nutshell, this code allows to fit user-defined models onto a set of multi-wavelength data, making use of spatial information and upper-limits with a consistent treatment. The code is highly flexible to allow its use for sources with complex structures.", + "topics": [ + "fitting", + "astronomy", + "statistics" + ] }, { - "uid": "github/TingMAC/FrMLNet", - "url": "https://github.com/TingMAC/FrMLNet", - "rel": "/software/repository/github/TingMAC/FrMLNet", - "avatar": "https://avatars.githubusercontent.com/u/45377618?v=4", - "description": "This is a implementation of training code of this paper \u201cFrMLNet: Framelet-based Multi-level Network for Pansharpening\u201d", + "uid": "github/DreamCloud-Project/AMALTHEA-SimGrid", + "url": "https://github.com/DreamCloud-Project/AMALTHEA-SimGrid", + "rel": "/software/repository/github/DreamCloud-Project/AMALTHEA-SimGrid", + "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", + "description": "Simulator for cloud applications described using the Amalthea application model on top of SimGrid", "topics": [] }, { - "uid": "github/austinpeel/herculens", - "url": "https://github.com/austinpeel/herculens", - "rel": "/software/repository/github/austinpeel/herculens", - "avatar": "https://avatars.githubusercontent.com/u/17024310?v=4", - "description": "Auto-differentiable strong lens modelling with JAX", + "uid": "github/DreamCloud-Project/McSim-TLM-NoC", + "url": "https://github.com/DreamCloud-Project/McSim-TLM-NoC", + "rel": "/software/repository/github/DreamCloud-Project/McSim-TLM-NoC", + "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", + "description": "Manycore platform Simulation tool for NoC-based platform at a Transactional Level Modeling level", "topics": [] }, { - "uid": "github/AnitaPetzler/AMOEBA", - "url": "https://github.com/AnitaPetzler/AMOEBA", - "rel": "/software/repository/github/AnitaPetzler/AMOEBA", - "avatar": "https://avatars.githubusercontent.com/u/39294322?v=4", - "description": "Automated Molecular Excitation Bayesian line-fitting Algorithm", + "uid": "github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", + "url": "https://github.com/DreamCloud-Project/McSim-Cycle-accurate-Xbar", + "rel": "/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-Xbar", + "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", + "description": "Manycore platform Simulation tool for crossbar-based platform at a Cycle-accurate level", "topics": [] }, { - "uid": "github/JuliaQX/QXTools.jl", - "url": "https://github.com/JuliaQX/QXTools.jl", - "rel": "/software/repository/github/JuliaQX/QXTools.jl", - "avatar": "https://avatars.githubusercontent.com/u/77590457?v=4", - "description": "Julia package for quantum circuit simulation using tensor networks", + "uid": "github/DreamCloud-Project/McSim-Cycle-accurate-NoC", + "url": "https://github.com/DreamCloud-Project/McSim-Cycle-accurate-NoC", + "rel": "/software/repository/github/DreamCloud-Project/McSim-Cycle-accurate-NoC", + "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", + "description": "Manycore platform Simulation tool for NoC-based platform at a Cycle-accurate level", "topics": [] }, { - "uid": "github/PyPSA/atlite", - "url": "https://github.com/PyPSA/atlite", - "rel": "/software/repository/github/PyPSA/atlite", - "avatar": "https://avatars.githubusercontent.com/u/32890768?v=4", - "description": "Atlite: Light-weight version of Aarhus RE Atlas for converting weather data to power systems data", + "uid": "github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", + "url": "https://github.com/DreamCloud-Project/AMALTHEA-Microworkload-Generator", + "rel": "/software/repository/github/DreamCloud-Project/AMALTHEA-Microworkload-Generator", + "avatar": "https://avatars2.githubusercontent.com/u/15323202?v=4", + "description": "Command line tool generating micro workloads from an AMALTHEA application", "topics": [] }, { - "uid": "github/PyPSA/linopy", - "url": "https://github.com/PyPSA/linopy", - "rel": "/software/repository/github/PyPSA/linopy", - "avatar": "https://avatars.githubusercontent.com/u/32890768?v=4", - "description": "Linear optimization with N-D labeled arrays in Python", + "uid": "github/joefarrington/mdpax", + "url": "https://github.com/joefarrington/mdpax", + "rel": "/software/repository/github/joefarrington/mdpax", + "avatar": "https://avatars.githubusercontent.com/u/22770922?v=4", + "description": "GPU-accelerated MDP solvers in Python with JAX", "topics": [ - "optimisation", - "python", + "dynamic-programming", + "jax", "optimization", - "xarray", - "cbc", - "gurobi", - "cplex", - "glpk", - "xpress", - "linear-optimization", - "linear-optimisation" + "reinforcement-learning", + "value-iteration" ] }, { - "uid": "github/Shamir-Lab/domino_web", - "url": "https://github.com/Shamir-Lab/domino_web", - "rel": "/software/repository/github/Shamir-Lab/domino_web", - "avatar": "https://avatars.githubusercontent.com/u/16764377?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/cespinosa/pyHIIexplorerV2", - "url": "https://github.com/cespinosa/pyHIIexplorerV2", - "rel": "/software/repository/github/cespinosa/pyHIIexplorerV2", - "avatar": "https://avatars.githubusercontent.com/u/46690546?v=4", - "description": null, + "uid": "github/schlafly/crowdsource", + "url": "https://github.com/schlafly/crowdsource", + "rel": "/software/repository/github/schlafly/crowdsource", + "avatar": "https://avatars.githubusercontent.com/u/1417841?v=4", + "description": "Crowded field photometry pipeline", "topics": [] }, { - "uid": "github/m-shahbaz-kharal/LiGuard-JOSS", - "url": "https://github.com/m-shahbaz-kharal/LiGuard-JOSS", - "rel": "/software/repository/github/m-shahbaz-kharal/LiGuard-JOSS", - "avatar": "https://avatars.githubusercontent.com/u/9637550?v=4", - "description": "A research-purposed, GUI-powered, Python-based framework that allows easy development of dynamic point-cloud (and accompanying image) data processing pipelines.", + "uid": "github/GeminiDRSoftware/DRAGONS", + "url": "https://github.com/GeminiDRSoftware/DRAGONS", + "rel": "/software/repository/github/GeminiDRSoftware/DRAGONS", + "avatar": "https://avatars.githubusercontent.com/u/12435450?v=4", + "description": "Data Reduction for Astronomy from Gemini Observatory North and South", "topics": [ - "bulk-operation", - "camera", - "image-processing", - "image-visualization", - "lidar", - "lidar-camera-fusion", - "open3d", - "opencv", - "point-cloud-processing", - "point-cloud-visualization", - "python" + "dragons", + "gemini-data", + "dragons-data-reduction", + "gemini-iraf", + "astronomy", + "gemini-observatory" ] }, { - "uid": "github/pni-lab/mlconfound", - "url": "https://github.com/pni-lab/mlconfound", - "rel": "/software/repository/github/pni-lab/mlconfound", - "avatar": "https://avatars.githubusercontent.com/u/53299837?v=4", - "description": "Tools for analyzing and quantifying effects of counfounder variables on machine learning model predictions.", + "uid": "github/astrocatalogs/astrocats", + "url": "https://github.com/astrocatalogs/astrocats", + "rel": "/software/repository/github/astrocatalogs/astrocats", + "avatar": "https://avatars.githubusercontent.com/u/16644580?v=4", + "description": "Astrocats package for constructing astronomical catalogs", "topics": [ - "confounders", - "machine-learning", - "predictive-modeling", - "permutation-test", - "conditional-independence" + "catalog", + "open-astronomy-catalogs" ] }, { - "uid": "github/mavrix93/LightCurvesClassifier", - "url": "https://github.com/mavrix93/LightCurvesClassifier", - "rel": "/software/repository/github/mavrix93/LightCurvesClassifier", - "avatar": "https://avatars.githubusercontent.com/u/17453516?v=4", - "description": "Package for machine learning of astronomical objects such as light curves", + "uid": "github/MichielsenM/FOAM", + "url": "https://github.com/MichielsenM/FOAM", + "rel": "/software/repository/github/MichielsenM/FOAM", + "avatar": "https://avatars.githubusercontent.com/u/33225623?v=4", + "description": "A Python package for forward asteroseismic modelling of gravity modes", "topics": [ - "light-curves", - "star", - "database-connector", - "tuning-parameters", - "machine-learning", - "django", - "classification", - "feature-extraction" + "asteroseismology", + "astronomy", + "python", + "astrophysics" ] }, { - "uid": "github/AliYoussef96/parazitCUB", - "url": "https://github.com/AliYoussef96/parazitCUB", - "rel": "/software/repository/github/AliYoussef96/parazitCUB", - "avatar": "https://avatars.githubusercontent.com/u/42375503?v=4", - "description": "parazitCUB streamlines the process of investigating the adaptations of parasites' Codon Usage Bias (CUB) within the R environment", + "uid": "github/AdriaJ/polyclean", + "url": "https://github.com/AdriaJ/polyclean", + "rel": "/software/repository/github/AdriaJ/polyclean", + "avatar": "https://avatars.githubusercontent.com/u/43072455?v=4", + "description": "PolyCLEAN algorithm for radio interferometric imaging, based on Polyatomic Frank-Wolfe.", "topics": [] }, { - "uid": "github/TomWagg/cogsworth", - "url": "https://github.com/TomWagg/cogsworth", - "rel": "/software/repository/github/TomWagg/cogsworth", - "avatar": "https://avatars.githubusercontent.com/u/21990332?v=4", - "description": "A Python package for performing self-consistent population synthesis and galactic dynamics simulations", + "uid": "github/BogdanCiambur/PROFILER", + "url": "https://github.com/BogdanCiambur/PROFILER", + "rel": "/software/repository/github/BogdanCiambur/PROFILER", + "avatar": "https://avatars.githubusercontent.com/u/19526241?v=4", + "description": "This repository contains the code Profiler, a Python program for decomposing galaxy light profiles in 1D", "topics": [ - "astrophysics", - "galactic-dynamics", - "population-synthesis", - "python" + "galaxy-morphology", + "galaxy", + "decompose-galaxy-profiles", + "astronomical-algorithms", + "python", + "profile", + "lmfit" ] }, { - "uid": "github/mriener/gausspyplus", - "url": "https://github.com/mriener/gausspyplus", - "rel": "/software/repository/github/mriener/gausspyplus", - "avatar": "https://avatars.githubusercontent.com/u/26575754?v=4", - "description": "Fully automated Gaussian decomposition package for emission line spectra", + "uid": "github/TheFischerLab/FLEXR", + "url": "https://github.com/TheFischerLab/FLEXR", + "rel": "/software/repository/github/TheFischerLab/FLEXR", + "avatar": "https://avatars.githubusercontent.com/u/72938392?v=4", + "description": "Multi-conformer modeling of crystallographic protein structures", + "topics": [] + }, + { + "uid": "github/Cantera/cantera", + "url": "https://github.com/Cantera/cantera", + "rel": "/software/repository/github/Cantera/cantera", + "avatar": "https://avatars2.githubusercontent.com/u/817698?v=4", + "description": "Chemical kinetics, thermodynamics, and transport tool suite", + "topics": [] + }, + { + "uid": "github/crs4/rocrate-validator", + "url": "https://github.com/crs4/rocrate-validator", + "rel": "/software/repository/github/crs4/rocrate-validator", + "avatar": "https://avatars.githubusercontent.com/u/4609555?v=4", + "description": "A Python package to validate RO-Crates", + "topics": [] + }, + { + "uid": "github/crs4/life_monitor", + "url": "https://github.com/crs4/life_monitor", + "rel": "/software/repository/github/crs4/life_monitor", + "avatar": "https://avatars.githubusercontent.com/u/4609555?v=4", + "description": "Workflow Sustainability Service", "topics": [ - "decomposition", - "python-packages", - "spectra" + "workflow", + "monitoring", + "sustainable-software", + "testing" ] }, { - "uid": "github/bionlplab/GlaucomaNet", - "url": "https://github.com/bionlplab/GlaucomaNet", - "rel": "/software/repository/github/bionlplab/GlaucomaNet", - "avatar": "https://avatars.githubusercontent.com/u/64240964?v=4", - "description": "A deep-learning algorithm for the diagnosis of primary open-angle glaucoma from fundus photographs", + "uid": "github/PengyiZhang/DRR4Covid", + "url": "https://github.com/PengyiZhang/DRR4Covid", + "rel": "/software/repository/github/PengyiZhang/DRR4Covid", + "avatar": "https://avatars.githubusercontent.com/u/53178862?v=4", + "description": "DRR4Covid: Learning Automated COVID-19 Infection Segmentation from Digitally Reconstructed Radiographs", "topics": [] }, { - "uid": "github/Aminsinichi/wearable-hrv", - "url": "https://github.com/Aminsinichi/wearable-hrv", - "rel": "/software/repository/github/Aminsinichi/wearable-hrv", - "avatar": "https://avatars.githubusercontent.com/u/126984097?v=4", - "description": "A Python package for the validation of heart rate and heart rate variability in wearables", + "uid": "github/atmos-cloud-sim-uj/PySDM", + "url": "https://github.com/atmos-cloud-sim-uj/PySDM", + "rel": "/software/repository/github/atmos-cloud-sim-uj/PySDM", + "avatar": "https://avatars.githubusercontent.com/u/48702007?v=4", + "description": "Pythonic particle-based (super-droplet) warm-rain/aqueous-chemistry cloud microphysics package with box, parcel & 1D/2D prescribed-flow examples in Python, Julia and Matlab", "topics": [ - "heart-rate", - "heart-rate-variability", - "hrv", - "psychophysiology", + "physics-simulation", + "monte-carlo-simulation", + "gpu-computing", + "atmospheric-modelling", + "particle-system", + "numba", + "thrust", + "nvrtc", + "pint", + "atmospheric-physics", "python", - "wearables", - "validation" + "simulation", + "gpu", + "cuda", + "research", + "pypi-package" ] }, { - "uid": "github/OFFIS-DAI/Mango.jl", - "url": "https://github.com/OFFIS-DAI/Mango.jl", - "rel": "/software/repository/github/OFFIS-DAI/Mango.jl", - "avatar": "https://avatars.githubusercontent.com/u/148066510?v=4", - "description": "Modular Julia-based agent framework to implement multi-agent systems", + "uid": "github/atmos-cloud-sim-uj/PyMPDATA", + "url": "https://github.com/atmos-cloud-sim-uj/PyMPDATA", + "rel": "/software/repository/github/atmos-cloud-sim-uj/PyMPDATA", + "avatar": "https://avatars.githubusercontent.com/u/48702007?v=4", + "description": "Numba-accelerated Pythonic implementation of MPDATA with examples in Python, Julia and Matlab", "topics": [ - "agent", - "distributed-computing", - "multi-agent-systems", - "agent-based", - "agent-based-simulation", - "agent-based-control" + "pde-solver", + "numerical-integration", + "advection", + "numba", + "advection-diffusion", + "atmospheric-modelling", + "python", + "simulation", + "research", + "pypi-package" ] }, { - "uid": "github/hfarias/mask_galaxy", - "url": "https://github.com/hfarias/mask_galaxy", - "rel": "/software/repository/github/hfarias/mask_galaxy", - "avatar": "https://avatars.githubusercontent.com/u/1410657?v=4", - "description": "Morphological segmentation of Galaxies", - "topics": [ - "computer-vision", - "mask-rcnn", - "astroinformatics", - "astronomy" - ] + "uid": "github/OceanParcels/plasticparcels", + "url": "https://github.com/OceanParcels/plasticparcels", + "rel": "/software/repository/github/OceanParcels/plasticparcels", + "avatar": "https://avatars.githubusercontent.com/u/14887518?v=4", + "description": "Repository for PlasticParcels tool", + "topics": [] }, { - "uid": "github/Jinsl-lab/SDImpute", - "url": "https://github.com/Jinsl-lab/SDImpute", - "rel": "/software/repository/github/Jinsl-lab/SDImpute", - "avatar": "https://avatars.githubusercontent.com/u/65643584?v=4", - "description": "A R package.", + "uid": "github/entangled/entangled", + "url": "https://github.com/entangled/entangled", + "rel": "/software/repository/github/entangled/entangled", + "avatar": "https://avatars2.githubusercontent.com/u/58023578?v=4", + "description": "bi-directional tangle daemon for literate programming", "topics": [] }, { - "uid": "github/rae-holcomb/SpinSpotter", - "url": "https://github.com/rae-holcomb/SpinSpotter", - "rel": "/software/repository/github/rae-holcomb/SpinSpotter", - "avatar": "https://avatars.githubusercontent.com/u/69921202?v=4", - "description": "An automated algorithm to calculate stellar rotation periods from high-cadence photometry.", + "uid": "github/era-urban/wrfpy", + "url": "https://github.com/ERA-URBAN/wrfpy", + "rel": "/software/repository/github/era-urban/wrfpy", + "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", + "description": null, "topics": [] }, { - "uid": "github/CEMeNT-PSAAP/MCDC", - "url": "https://github.com/CEMeNT-PSAAP/MCDC", - "rel": "/software/repository/github/CEMeNT-PSAAP/MCDC", - "avatar": "https://avatars.githubusercontent.com/u/69278530?v=4", - "description": "MC/DC: Monte Carlo Dynamic Code", - "topics": [ - "high-performance-computing", - "monte-carlo-simulation", - "neutron-transport", - "neutronics", - "nuclear-engineering", - "particle-transport", - "radiation-transport", - "parallel", - "python", - "simulation" - ] + "uid": "github/AmeryGration/dyad", + "url": "https://github.com/AmeryGration/dyad", + "rel": "/software/repository/github/AmeryGration/dyad", + "avatar": "https://avatars.githubusercontent.com/u/15691891?v=4", + "description": "Two-body dynamics and binary-star statistics.", + "topics": [] }, { - "uid": "github/brunettsp/myosothes", - "url": "https://github.com/brunettsp/myosothes", - "rel": "/software/repository/github/brunettsp/myosothes", - "avatar": "https://avatars.githubusercontent.com/u/107464966?v=4", - "description": "An automated Myofibers Segmentation wOrkflow Tuned for HE Staining", + "uid": "github/open-aviation/tangram", + "url": "https://github.com/open-aviation/tangram", + "rel": "/software/repository/github/open-aviation/tangram", + "avatar": "https://avatars.githubusercontent.com/u/104085040?v=4", + "description": "An open platform for modular, real-time aviation research", "topics": [] }, { - "uid": "github/esa/NIDN", - "url": "https://github.com/esa/NIDN", - "rel": "/software/repository/github/esa/NIDN", - "avatar": "https://avatars.githubusercontent.com/u/3287599?v=4", - "description": "Neural Inverse Design of Nanostructures", + "uid": "github/Dfupa/meTAline", + "url": "https://github.com/Dfupa/meTAline", + "rel": "/software/repository/github/Dfupa/meTAline", + "avatar": "https://avatars.githubusercontent.com/u/43205584?v=4", + "description": "WGS pipeline implementation in Snakemake", "topics": [] }, { - "uid": "github/esa/pagmo2-paper", - "url": "https://github.com/esa/pagmo2-paper", - "rel": "/software/repository/github/esa/pagmo2-paper", - "avatar": "https://avatars0.githubusercontent.com/u/3287599?v=4", - "description": "paper for JOSS on pagmo and pygmo", + "uid": "github/jdonnert/WVTICs", + "url": "https://github.com/jdonnert/WVTICs", + "rel": "/software/repository/github/jdonnert/WVTICs", + "avatar": "https://avatars.githubusercontent.com/u/5123958?v=4", + "description": "SPH initial conditions using Weighted Voronoi Tesselations", "topics": [] }, { - "uid": "github/esa/polyhedral-gravity-model", - "url": "https://github.com/esa/polyhedral-gravity-model", - "rel": "/software/repository/github/esa/polyhedral-gravity-model", - "avatar": "https://avatars.githubusercontent.com/u/3287599?v=4", - "description": "Implementation of a polyhedral gravity model in C++17 with a Python Binding", - "topics": [ - "cpp17", - "gravity", - "polyhedral-model", - "python" - ] + "uid": "github/ZacharyJia/opsdn", + "url": "https://github.com/ZacharyJia/opsdn", + "rel": "/software/repository/github/ZacharyJia/opsdn", + "avatar": "https://avatars.githubusercontent.com/u/7402471?v=4", + "description": null, + "topics": [] }, { - "uid": "github/patkel/big-macs-calibrate", - "url": "https://github.com/patkel/big-macs-calibrate", - "rel": "/software/repository/github/patkel/big-macs-calibrate", - "avatar": "https://avatars.githubusercontent.com/u/5139900?v=4", - "description": "Automatically exported from code.google.com/p/big-macs-calibrate", + "uid": "github/acbecker/hotpants", + "url": "https://github.com/acbecker/hotpants", + "rel": "/software/repository/github/acbecker/hotpants", + "avatar": "https://avatars.githubusercontent.com/u/901357?v=4", + "description": "hotpants", "topics": [] }, { - "uid": "github/tldr-group/samba-web", - "url": "https://github.com/tldr-group/samba-web", - "rel": "/software/repository/github/tldr-group/samba-web", - "avatar": "https://avatars.githubusercontent.com/u/78808638?v=4", - "description": "Local version of samba-web, a trainable segmentation web app with deep learning powered labelling", - "topics": [ - "materials-science", - "segment-anything-model", - "segmentation", - "webapp" - ] + "uid": "github/equitable-equations/fqar", + "url": "https://github.com/equitable-equations/fqar", + "rel": "/software/repository/github/equitable-equations/fqar", + "avatar": "https://avatars.githubusercontent.com/u/110704949?v=4", + "description": "The fqar package provides R tools for downloading and analyzing floristic quality assessment data from www.universalFQA.org", + "topics": [] }, { - "uid": "github/tldr-group/taufactor", - "url": "https://github.com/tldr-group/taufactor", - "rel": "/software/repository/github/tldr-group/taufactor", - "avatar": "https://avatars.githubusercontent.com/u/78808638?v=4", - "description": "TauFactor is a parallelised solver for calculating tortuosity factors from voxel data.", + "uid": "github/kotekan/kotekan", + "url": "https://github.com/kotekan/kotekan", + "rel": "/software/repository/github/kotekan/kotekan", + "avatar": "https://avatars.githubusercontent.com/u/36037416?v=4", + "description": "High performance radio data processing pipeline", "topics": [] }, { - "uid": "github/deepmedic/deepmedic", - "url": "https://github.com/deepmedic/deepmedic", - "rel": "/software/repository/github/deepmedic/deepmedic", - "avatar": "https://avatars.githubusercontent.com/u/29442582?v=4", - "description": "Efficient Multi-Scale 3D Convolutional Neural Network for Segmentation of 3D Medical Scans", - "topics": [ - "deep-learning", - "machine-learning", - "medical-imaging", - "neural-networks", - "convolutional-neural-networks" - ] + "uid": "github/shahmoradi/grb_world", + "url": "https://github.com/shahmoradi/grb_world", + "rel": "/software/repository/github/shahmoradi/grb_world", + "avatar": "https://avatars.githubusercontent.com/u/4683401?v=4", + "description": "Containing codes for the SGRB and LGRB world models", + "topics": [] }, { - "uid": "github/GrainLearning/grainLearning", - "url": "https://github.com/GrainLearning/grainLearning", - "rel": "/software/repository/github/GrainLearning/grainLearning", - "avatar": "https://avatars.githubusercontent.com/u/100259686?v=4", - "description": "A Bayesian uncertainty quantification toolbox for discrete and continuum numerical models of granular materials, developed by various projects of the University of Twente (NL), the Netherlands eScience Center (NL), University of Newcastle (AU), and Hiroshima University (JP).", - "topics": [ - "bayesian-inference", - "low-discrepancy-sequences", - "mixture-models", - "parameter-identification", - "sequential-monte-carlo", - "uncertainty-quantification" - ] + "uid": "github/inpefess/gym-saturation", + "url": "https://github.com/inpefess/gym-saturation", + "rel": "/software/repository/github/inpefess/gym-saturation", + "avatar": "https://avatars.githubusercontent.com/u/1696493?v=4", + "description": "an OpenAI Gym environment for saturation provers", + "topics": [] }, { - "uid": "github/elsner/arkcos", - "url": "https://github.com/elsner/arkcos", - "rel": "/software/repository/github/elsner/arkcos", - "avatar": "https://avatars.githubusercontent.com/u/1218415?v=4", - "description": "Accelerated radial kernel convolution on the sphere", + "uid": "github/ConesaLab/MultiPower", + "url": "https://github.com/ConesaLab/MultiPower", + "rel": "/software/repository/github/ConesaLab/MultiPower", + "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", + "description": "Statistical power studies for multi-omics experiments.", "topics": [] }, { - "uid": "github/wuzhenao/CPPLS-MLP", - "url": "https://github.com/wuzhenao/CPPLS-MLP", - "rel": "/software/repository/github/wuzhenao/CPPLS-MLP", - "avatar": "https://avatars.githubusercontent.com/u/114455899?v=4", - "description": null, + "uid": "github/ConesaLab/SQANTI3", + "url": "https://github.com/ConesaLab/SQANTI3", + "rel": "/software/repository/github/ConesaLab/SQANTI3", + "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", + "description": "Tool for the Quality Control of Long-Read Defined Transcriptomes", "topics": [] }, { - "uid": "github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", - "url": "https://github.com/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", - "rel": "/software/repository/github/lukaswenzl/Magnification_bias_estimation_in_galaxy_surveys", - "avatar": "https://avatars.githubusercontent.com/u/31296160?v=4", - "description": "Code underlying the paper Wenzl, Chen, Bean 2023 https://arxiv.org/abs/2308.05892", + "uid": "github/ConesaLab/MOSim", + "url": "https://github.com/ConesaLab/MOSim", + "rel": "/software/repository/github/ConesaLab/MOSim", + "avatar": "https://avatars.githubusercontent.com/u/29752440?v=4", + "description": "Bulk and single-cell Multi-Omics ground truth Simulator in R", "topics": [] }, { - "uid": "github/GRTLCollaboration/GRTresna", - "url": "https://github.com/GRTLCollaboration/GRTresna", - "rel": "/software/repository/github/GRTLCollaboration/GRTresna", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "A code for solving the initial data constraints in General Relativity", + "uid": "github/semiautomaticgit/SemiAutomaticClassificationPlugin", + "url": "https://github.com/semiautomaticgit/SemiAutomaticClassificationPlugin", + "rel": "/software/repository/github/semiautomaticgit/SemiAutomaticClassificationPlugin", + "avatar": "https://avatars.githubusercontent.com/u/7038696?v=4", + "description": null, "topics": [] }, { - "uid": "github/GRTLCollaboration/GRFolres", - "url": "https://github.com/GRTLCollaboration/GRFolres", - "rel": "/software/repository/github/GRTLCollaboration/GRFolres", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "Extension to GRChombo for Modified Gravity simulations", + "uid": "github/xzackli/WignerFamilies.jl", + "url": "https://github.com/xzackli/WignerFamilies.jl", + "rel": "/software/repository/github/xzackli/WignerFamilies.jl", + "avatar": "https://avatars.githubusercontent.com/u/8048811?v=4", + "description": "compute families of wigner symbols with recurrence relations", + "topics": [ + "wigner-symbols", + "wigner-3j", + "julia", + "quantum", + "cosmology" + ] + }, + { + "uid": "github/xastprl/darsakx", + "url": "https://github.com/xastprl/DarsakX", + "rel": "/software/repository/github/xastprl/darsakx", + "avatar": "https://avatars.githubusercontent.com/u/102579066?v=4", + "description": "DarsakX is a Python package that can be used to design and analyze the imaging performance of a multi-shell X-ray telescope with an optical configuration similar to Wolter-1 optics for astronomical purposes. ", "topics": [] }, { - "uid": "github/GRTLCollaboration/GRChombo", - "url": "https://github.com/GRTLCollaboration/GRChombo", - "rel": "/software/repository/github/GRTLCollaboration/GRChombo", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "An AMR based open-source code for numerical relativity simulations.", + "uid": "github/Health-RI/img2catalog", + "url": "https://github.com/Health-RI/img2catalog", + "rel": "/software/repository/github/Health-RI/img2catalog", + "avatar": "https://avatars.githubusercontent.com/u/80106593?v=4", + "description": "Repository for a tool to help make XNAT into a FAIR Data Point", "topics": [] }, { - "uid": "github/GRTLCollaboration/GRDzhadzha", - "url": "https://github.com/GRTLCollaboration/GRDzhadzha", - "rel": "/software/repository/github/GRTLCollaboration/GRDzhadzha", - "avatar": "https://avatars.githubusercontent.com/u/11063947?v=4", - "description": "A code to evolve matter on curved spacetimes with an analytic time and space dependence, e.g. black holes", + "uid": "github/hjens/lasso_spectra", + "url": "https://github.com/hjens/lasso_spectra", + "rel": "/software/repository/github/hjens/lasso_spectra", + "avatar": "https://avatars.githubusercontent.com/u/966343?v=4", + "description": "Functions for predicting properties from galaxy spectra, using Lasso regression", "topics": [] }, { - "uid": "github/QingyuLiaib/PLA-MoRe", - "url": "https://github.com/QingyuLiaib/PLA-MoRe", - "rel": "/software/repository/github/QingyuLiaib/PLA-MoRe", - "avatar": "https://avatars.githubusercontent.com/u/48451498?v=4", - "description": null, + "uid": "github/cinemascience/cinema_snap", + "url": "https://github.com/cinemascience/cinema_snap", + "rel": "/software/repository/github/cinemascience/cinema_snap", + "avatar": "https://avatars.githubusercontent.com/u/36246440?v=4", + "description": "React-based web viewer", "topics": [] }, { - "uid": "github/smsharma/fermi-gce-flows", - "url": "https://github.com/smsharma/fermi-gce-flows", - "rel": "/software/repository/github/smsharma/fermi-gce-flows", - "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", - "description": "Simulation-based inference for the Galactic Center gamma-ray excess. Code repository associated with https://arxiv.org/abs/2110.06931.", + "uid": "github/henrikju/resolve", + "url": "https://github.com/henrikju/resolve", + "rel": "/software/repository/github/henrikju/resolve", + "avatar": "https://avatars.githubusercontent.com/u/2954303?v=4", + "description": "A Bayesian radio aperture synthesis algorithm.", "topics": [] }, { - "uid": "github/smsharma/dark-photons-perturbations", - "url": "https://github.com/smsharma/dark-photons-perturbations", - "rel": "/software/repository/github/smsharma/dark-photons-perturbations", - "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", - "description": "Dark photon conversions in our inhomogeneous Universe. Code repository associated with the papers https://arxiv.org/abs/2002.05165 and https://arxiv.org/abs/2004.06733.", + "uid": "github/genomicepidemiology/ARGprofiler", + "url": "https://github.com/genomicepidemiology/ARGprofiler", + "rel": "/software/repository/github/genomicepidemiology/ARGprofiler", + "avatar": "https://avatars.githubusercontent.com/u/8056318?v=4", + "description": "A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets", "topics": [ - "dark-photons", - "dark-matter", - "perturbations", - "physics", - "particle-physics", - "cosmology" + "argprofiler" ] }, { - "uid": "github/smsharma/mining-for-substructure-lens", - "url": "https://github.com/smsharma/mining-for-substructure-lens", - "rel": "/software/repository/github/smsharma/mining-for-substructure-lens", - "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", - "description": "Inference of substructure properties in strong lensing systems with machine learning. Code repository associated with https://arxiv.org/abs/1909.02005.", - "topics": [ - "gravitational-lensing", - "machine-learning" - ] + "uid": "github/emerge-erc/ALminer", + "url": "https://github.com/emerge-erc/ALminer", + "rel": "/software/repository/github/emerge-erc/ALminer", + "avatar": "https://avatars.githubusercontent.com/u/84787715?v=4", + "description": "ALminer: ALMA archive mining and visualization toolkit", + "topics": [] }, { - "uid": "github/ruizengalways/FOD-Net", - "url": "https://github.com/ruizengalways/FOD-Net", - "rel": "/software/repository/github/ruizengalways/FOD-Net", - "avatar": "https://avatars.githubusercontent.com/u/9302805?v=4", - "description": "FOD-Net: A Deep Learning Method for Fiber Orientation Distribution Angular Super Resolution", - "topics": [ - "deep-learning", - "diffusion-mri", - "medical-imaging", - "connectomics", - "tractography", - "mrtrix3", - "fod" - ] + "uid": "github/storyofthewolf/ExoRT", + "url": "https://github.com/storyofthewolf/ExoRT", + "rel": "/software/repository/github/storyofthewolf/ExoRT", + "avatar": "https://avatars.githubusercontent.com/u/19943455?v=4", + "description": "radiative transfer code, designed for use with CESM/CAM", + "topics": [] }, { - "uid": "github/remi-adam/minot", - "url": "https://github.com/remi-adam/minot", - "rel": "/software/repository/github/remi-adam/minot", - "avatar": "https://avatars.githubusercontent.com/u/49564579?v=4", - "description": "minot: Modeling of the ICM (Non-)thermal content and Observables prediction Tools", + "uid": "github/storyofthewolf/ExoCAM", + "url": "https://github.com/storyofthewolf/ExoCAM", + "rel": "/software/repository/github/storyofthewolf/ExoCAM", + "avatar": "https://avatars.githubusercontent.com/u/19943455?v=4", + "description": null, "topics": [] }, { - "uid": "github/pkestene/xsmurf", - "url": "https://github.com/pkestene/xsmurf", - "rel": "/software/repository/github/pkestene/xsmurf", - "avatar": "https://avatars.githubusercontent.com/u/8276295?v=4", - "description": "a wavelet-based multifractal image analysis tool implementing the WTMM (Wavelet Transform Modulus Maxima) method.", - "topics": [ - "multifractal-analysis", - "tcl", - "wavelet", - "modulus-maxima", - "tk", - "continuous-wavelet", - "fractal", - "multifractal", - "wtmm", - "singularity-spectrum", - "monofractal", - "turbulence", - "holder-exponent" - ] + "uid": "github/nebblu/ReACT", + "url": "https://github.com/nebblu/ReACT", + "rel": "/software/repository/github/nebblu/ReACT", + "avatar": "https://avatars.githubusercontent.com/u/45853389?v=4", + "description": "ReACT public repo", + "topics": [] }, { - "uid": "github/pkestene/ramsesGPU", - "url": "https://github.com/pkestene/ramsesGPU", - "rel": "/software/repository/github/pkestene/ramsesGPU", - "avatar": "https://avatars.githubusercontent.com/u/8276295?v=4", - "description": "Astrophysics MHD simulation code optimized for large cluster of GPU", + "uid": "github/canorve/EllipSect", + "url": "https://github.com/canorve/EllipSect", + "rel": "/software/repository/github/canorve/EllipSect", + "avatar": "https://avatars.githubusercontent.com/u/3579189?v=4", + "description": "An analysis tool for GALFIT output", "topics": [ - "cuda", - "gpu", - "gpu-acceleration", - "gpgpu", - "mhd", - "cfd", - "hydrodynamics", - "finite-volume", - "parallel-computing", - "hpc", - "astrophysics", - "kelvin-helmholtz-instability", - "hdf5", - "pnetcdf", - "turbulence", - "shearing-box", - "muscl-hancock", - "conservation-law", - "euler-equations", - "rayleigh-taylor" + "galfit", + "surface-brightness", + "galaxy" ] }, { - "uid": "github/AstrobioMike/GToTree", - "url": "https://github.com/AstrobioMike/GToTree", - "rel": "/software/repository/github/AstrobioMike/GToTree", - "avatar": "https://avatars.githubusercontent.com/u/13923308?v=4", - "description": "A user-friendly workflow for phylogenomics", - "topics": [] - }, - { - "uid": "github/rohinkumar/correlcalc", - "url": "https://github.com/rohinkumar/correlcalc", - "rel": "/software/repository/github/rohinkumar/correlcalc", - "avatar": "https://avatars.githubusercontent.com/u/3352158?v=4", - "description": "A Python package to calculate 2-point correlation function from galaxy redshift surveys for any generic model of Cosmology or geometry", - "topics": [] + "uid": "github/canorve/GALFITools", + "url": "https://github.com/canorve/GALFITools", + "rel": "/software/repository/github/canorve/GALFITools", + "avatar": "https://avatars.githubusercontent.com/u/3579189?v=4", + "description": "A library for GALFIT", + "topics": [ + "python", + "python3" + ] }, { - "uid": "github/HaowenZhang/TRINITY", - "url": "https://github.com/HaowenZhang/TRINITY", - "rel": "/software/repository/github/HaowenZhang/TRINITY", - "avatar": "https://avatars.githubusercontent.com/u/45951249?v=4", - "description": "An empirical model that statistically connects dark matter halos, galaxies and supermassive black holes from z=0-10.", - "topics": [] + "uid": "github/JesusTorrado/extrapops", + "url": "https://github.com/JesusTorrado/extrapops", + "rel": "/software/repository/github/JesusTorrado/extrapops", + "avatar": "https://avatars.githubusercontent.com/u/2233649?v=4", + "description": "extrapops: fast simulation and analysis of extra-galactic binary GW sources", + "topics": [ + "binary-black-holes", + "gravitational-waves" + ] }, { - "uid": "github/BEAST-Fitting/beast", - "url": "https://github.com/BEAST-Fitting/beast", - "rel": "/software/repository/github/BEAST-Fitting/beast", - "avatar": "https://avatars.githubusercontent.com/u/2017911?v=4", - "description": "Bayesian Extinction And Stellar Tool", + "uid": "github/LuisScoccola/persistable", + "url": "https://github.com/LuisScoccola/persistable", + "rel": "/software/repository/github/LuisScoccola/persistable", + "avatar": "https://avatars.githubusercontent.com/u/1679929?v=4", + "description": "density-based clustering for exploratory data analysis based on multi-parameter persistence", "topics": [ - "astronomy", - "stars", - "dust", - "fitting", - "bayesian", - "astrophysics", - "hacktoberfest" + "cluster-analysis", + "clustering", + "clustering-algorithm", + "machine-learning", + "machine-learning-algorithms", + "topological-data-analysis", + "unsupervised-learning" ] }, { - "uid": "github/918particle/AskaryanModule", - "url": "https://github.com/918particle/AskaryanModule", - "rel": "/software/repository/github/918particle/AskaryanModule", - "avatar": "https://avatars.githubusercontent.com/u/15349365?v=4", + "uid": "github/pengweixing/FACT", + "url": "https://github.com/pengweixing/FACT", + "rel": "/software/repository/github/pengweixing/FACT", + "avatar": "https://avatars.githubusercontent.com/u/33319823?v=4", "description": null, "topics": [] }, { - "uid": "github/matiscke/lcps", - "url": "https://github.com/matiscke/lcps", - "rel": "/software/repository/github/matiscke/lcps", - "avatar": "https://avatars.githubusercontent.com/u/19270173?v=4", - "description": "A tool for pre-selecting light curves with possible transit signatures", + "uid": "github/flabarga/iSTARMOD", + "url": "https://github.com/flabarga/iSTARMOD", + "rel": "/software/repository/github/flabarga/iSTARMOD", + "avatar": "https://avatars.githubusercontent.com/u/38010370?v=4", + "description": "python code implementing Spectral Subtraction Technique to study chromospheric activity in Cool Stars", "topics": [] }, { - "uid": "github/editeodoro/Bbarolo", - "url": "https://github.com/editeodoro/Bbarolo", - "rel": "/software/repository/github/editeodoro/Bbarolo", - "avatar": "https://avatars.githubusercontent.com/u/10964144?v=4", - "description": "Bbarolo is a 3D fitting tool to derive the kinematics of galaxies from emission-line observations.", + "uid": "github/vcftools/index.html", + "url": null, + "rel": "/software/repository/github/vcftools/index.html", + "avatar": "", + "description": "a program package designed to provide easily accessible methods for working with complex genetic variation data in the form of VCF files, such as those generated by the 1000 Genomes Project.", "topics": [] }, { - "uid": "github/wmalab/EnHiC", - "url": "https://github.com/wmalab/EnHiC", - "rel": "/software/repository/github/wmalab/EnHiC", - "avatar": "https://avatars.githubusercontent.com/u/59233777?v=4", - "description": "Enhancing Hi-C matrix resolution", + "uid": "github/grazianoucci/game", + "url": "https://github.com/grazianoucci/game", + "rel": "/software/repository/github/grazianoucci/game", + "avatar": "https://avatars.githubusercontent.com/u/31356318?v=4", + "description": "GAlaxy Machine learning for Emission lines", "topics": [] }, { - "uid": "github/TheFischerLab/FLEXR", - "url": "https://github.com/TheFischerLab/FLEXR", - "rel": "/software/repository/github/TheFischerLab/FLEXR", - "avatar": "https://avatars.githubusercontent.com/u/72938392?v=4", - "description": "Multi-conformer modeling of crystallographic protein structures", + "uid": "github/grazianoucci/cosmic_variance", + "url": "https://github.com/grazianoucci/cosmic_variance", + "rel": "/software/repository/github/grazianoucci/cosmic_variance", + "avatar": "https://avatars.githubusercontent.com/u/31356318?v=4", + "description": null, "topics": [] }, { - "uid": "github/rhenanbartels/hrv", - "url": "https://github.com/rhenanbartels/hrv", - "rel": "/software/repository/github/rhenanbartels/hrv", - "avatar": "https://avatars3.githubusercontent.com/u/2186646?v=4", - "description": "A Python package for heart rate variability analysis", + "uid": "github/kd0kfo/cosmology", + "url": "https://github.com/kd0kfo/cosmology", + "rel": "/software/repository/github/kd0kfo/cosmology", + "avatar": "https://avatars.githubusercontent.com/u/2445911?v=4", + "description": "Applications to simulate gravitational lensing, through ray tracing and shear calculation. See http://research.davecoss.com for more details.", "topics": [] }, { - "uid": "github/tbronzwaer/raptor", - "url": "https://github.com/tbronzwaer/raptor", - "rel": "/software/repository/github/tbronzwaer/raptor", - "avatar": "https://avatars.githubusercontent.com/u/8244822?v=4", - "description": "Public version of the RAPTOR code for radiative transfer in arbitrary spacetimes. See README file for instructions and contact details.", - "topics": [] + "uid": "github/egpbos/barcode", + "url": "https://github.com/egpbos/barcode", + "rel": "/software/repository/github/egpbos/barcode", + "avatar": "https://avatars.githubusercontent.com/u/6146598?v=4", + "description": "Bayesian reconstruction of cosmic density fields", + "topics": [ + "bayesian-inference", + "cplusplus", + "cosmology", + "hamiltonian-monte-carlo", + "reconstruction" + ] }, { - "uid": "github/pilon/wiki", - "url": null, - "rel": "/software/repository/github/pilon/wiki", - "avatar": "", - "description": "Pilon is a software tool which can be used to automatically improve draft assemblies and find variation among strains, including large event detection.", + "uid": "github/MNGuenther/allesfitter", + "url": "https://github.com/MNGuenther/allesfitter", + "rel": "/software/repository/github/MNGuenther/allesfitter", + "avatar": "https://avatars.githubusercontent.com/u/11521683?v=4", + "description": "allesfitter is a convenient wrapper around the packages ellc (light curve and RV models), dynesty (static and dynamic nested sampling) emcee (Markov Chain Monte Carlo sampling) and celerite (Gaussian Process models).", "topics": [] }, { - "uid": "github/assumpcaothiago/NRPyElliptic", - "url": "https://github.com/assumpcaothiago/NRPyElliptic", - "rel": "/software/repository/github/assumpcaothiago/NRPyElliptic", - "avatar": "https://avatars.githubusercontent.com/u/66119258?v=4", - "description": "NRPyElliptic: fast hyperbolic relaxation solver for elliptic equations", - "topics": [] + "uid": "github/bow/crimson", + "url": "https://github.com/bow/crimson", + "rel": "/software/repository/github/bow/crimson", + "avatar": "https://avatars.githubusercontent.com/u/343998?v=4", + "description": "Bioinformatics tool outputs converter to JSON or YAML", + "topics": [ + "bioinformatics", + "json", + "yaml", + "converter" + ] }, { - "uid": "github/morisUtokyo/uTR", - "url": "https://github.com/morisUtokyo/uTR", - "rel": "/software/repository/github/morisUtokyo/uTR", - "avatar": "https://avatars.githubusercontent.com/u/30250204?v=4", - "description": "Detect key Units in mosaic Tandem Repeats from representative reads from the same locus ", + "uid": "github/bow/fsnviz", + "url": "https://github.com/bow/fsnviz", + "rel": "/software/repository/github/bow/fsnviz", + "avatar": "https://avatars.githubusercontent.com/u/343998?v=4", + "description": "Tool for plotting gene fusion events using Circos.", "topics": [] }, { - "uid": "github/koustavchandra/gwforge", - "url": "https://github.com/koustavchandra/gwforge", - "rel": "/software/repository/github/koustavchandra/gwforge", - "avatar": "https://avatars.githubusercontent.com/u/56917539?v=4", - "description": "A lightweight code to generate mock gravitational wave detector data using user-defined population and arbritary detector sensitivity.", + "uid": "github/Dulab2020/ARMT", + "url": "https://github.com/Dulab2020/ARMT", + "rel": "/software/repository/github/Dulab2020/ARMT", + "avatar": "https://avatars.githubusercontent.com/u/76273687?v=4", + "description": null, "topics": [] }, { - "uid": "github/SwiftVISA/SwiftVISASwift", - "url": "https://github.com/SwiftVISA/SwiftVISASwift", - "rel": "/software/repository/github/SwiftVISA/SwiftVISASwift", - "avatar": "https://avatars.githubusercontent.com/u/51682419?v=4", - "description": "A Swift backend for communicating to instruments over TCPIP over the VISA protocol.", + "uid": "github/GalacticDynamics-Oxford/Agama", + "url": "https://github.com/GalacticDynamics-Oxford/Agama", + "rel": "/software/repository/github/GalacticDynamics-Oxford/Agama", + "avatar": "https://avatars.githubusercontent.com/u/9365694?v=4", + "description": "Action-based galaxy modeling framework", "topics": [] }, { - "uid": "github/kokron/anzu", - "url": "https://github.com/kokron/anzu", - "rel": "/software/repository/github/kokron/anzu", - "avatar": "https://avatars.githubusercontent.com/u/10699475?v=4", - "description": "Measurements and emulation of Lagrangian bias models for clustering and lensing cross-correlations.", - "topics": [] + "uid": "github/siara-cc/Unishox2", + "url": "https://github.com/siara-cc/Unishox2", + "rel": "/software/repository/github/siara-cc/Unishox2", + "avatar": "https://avatars.githubusercontent.com/u/12986780?v=4", + "description": "Guaranteed compression for Unicode short strings", + "topics": [ + "compression", + "arduino", + "string-compression-algorithms", + "string-compression", + "database-compression", + "iot", + "short-string", + "json-compression", + "xml-compression", + "cost-optimization", + "bandwidth-saver", + "storage-saving", + "cloud-cost-intelligence" + ] }, { - "uid": "github/kokron/skyLine", - "url": "https://github.com/kokron/skyLine", - "rel": "/software/repository/github/kokron/skyLine", - "avatar": "https://avatars.githubusercontent.com/u/10699475?v=4", - "description": null, + "uid": "github/tgrimes/SeqNet", + "url": "https://github.com/tgrimes/SeqNet", + "rel": "/software/repository/github/tgrimes/SeqNet", + "avatar": "https://avatars.githubusercontent.com/u/16945884?v=4", + "description": "An R package for simulating RNA-sequence datasets from regulatory networks", "topics": [] }, { - "uid": "github/esilver01/small-lens-forecast-sims", - "url": "https://github.com/esilver01/small-lens-forecast-sims", - "rel": "/software/repository/github/esilver01/small-lens-forecast-sims", - "avatar": "https://avatars.githubusercontent.com/u/70253762?v=4", - "description": null, - "topics": [] + "uid": "github/Kushaalkumar-pothula/FLARE", + "url": "https://github.com/Kushaalkumar-pothula/FLARE", + "rel": "/software/repository/github/Kushaalkumar-pothula/FLARE", + "avatar": "https://avatars.githubusercontent.com/u/66947837?v=4", + "description": "Generates a synthetic Fast Radio Burst catalog, using the Monte Carlo technique.", + "topics": [ + "astrophysics", + "monte-carlo-simulation" + ] }, { - "uid": "github/esilver01/resnet-model-training", - "url": "https://github.com/esilver01/resnet-model-training", - "rel": "/software/repository/github/esilver01/resnet-model-training", - "avatar": "https://avatars.githubusercontent.com/u/70253762?v=4", + "uid": "github/aalhossary/pyemgpipeline", + "url": "https://github.com/aalhossary/pyemgpipeline", + "rel": "/software/repository/github/aalhossary/pyemgpipeline", + "avatar": "https://avatars.githubusercontent.com/u/3660195?v=4", "description": null, "topics": [] }, { - "uid": "github/NRDD-constraints/NRDD", - "url": "https://github.com/NRDD-constraints/NRDD", - "rel": "/software/repository/github/NRDD-constraints/NRDD", - "avatar": "https://avatars.githubusercontent.com/u/43461532?v=4", - "description": "A python tool for calculating the exclusion plot for Dark Matter interaction with the Standard Model in non-relativistic Effective Theory Models. ", - "topics": [] + "uid": "github/jonescompneurolab/hnn-core", + "url": "https://github.com/jonescompneurolab/hnn-core", + "rel": "/software/repository/github/jonescompneurolab/hnn-core", + "avatar": "https://avatars.githubusercontent.com/u/37816136?v=4", + "description": "Simulation and optimization of neural circuits for MEG/EEG source estimates", + "topics": [ + "neuron-simulator", + "eeg", + "meg", + "computational-modeling" + ] + }, + { + "uid": "github/cbielow/PTXQC", + "url": "https://github.com/cbielow/PTXQC", + "rel": "/software/repository/github/cbielow/PTXQC", + "avatar": "https://avatars.githubusercontent.com/u/6008722?v=4", + "description": "A Quality Control (QC) pipeline for Proteomics (PTX) results generated by MaxQuant", + "topics": [ + "maxquant", + "quality-control", + "report", + "metric", + "proteomics", + "heatmap", + "match-between-runs", + "drag-and-drop", + "openms", + "mztab", + "quality-metrics", + "hacktoberfest" + ] }, { - "uid": "github/EdanRein/pyPplusS", - "url": "https://github.com/EdanRein/pyPplusS", - "rel": "/software/repository/github/EdanRein/pyPplusS", - "avatar": "https://avatars.githubusercontent.com/u/37420656?v=4", - "description": "pyPplusS code package for modeling exoplanets with rings", + "uid": "github/magnusmanske/snpomatic", + "url": "https://github.com/magnusmanske/snpomatic", + "rel": "/software/repository/github/magnusmanske/snpomatic", + "avatar": "https://avatars.githubusercontent.com/u/1406572?v=4", + "description": "fast, stringent short-read mapping software", "topics": [] }, { - "uid": "github/furrer-lab/abn", - "url": "https://github.com/furrer-lab/abn", - "rel": "/software/repository/github/furrer-lab/abn", - "avatar": "https://avatars.githubusercontent.com/u/151543411?v=4", - "description": "Bayesian network analysis in R", + "uid": "github/pepkit/geofetch", + "url": "https://github.com/pepkit/geofetch", + "rel": "/software/repository/github/pepkit/geofetch", + "avatar": "https://avatars.githubusercontent.com/u/29280461?v=4", + "description": "Builds a PEP from SRA or GEO accessions", "topics": [ - "bayesian-network", - "binomial", - "categorical-data", - "gaussian", - "grouped-datasets", - "mixed-effects", - "multinomial", - "multivariate", - "poisson", - "structure-learning" + "download-manager", + "sra", + "geo", + "sra-data", + "metadata" ] }, { - "uid": "github/teuben/QAC", - "url": "https://github.com/teuben/QAC", - "rel": "/software/repository/github/teuben/QAC", - "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", - "description": "Quick Array Combinations: front end to CASA to run tp2vis, feather and various array combination methods", + "uid": "github/shaniAmare/long_read_tools", + "url": "https://github.com/shaniAmare/long_read_tools", + "rel": "/software/repository/github/shaniAmare/long_read_tools", + "avatar": "https://avatars1.githubusercontent.com/u/43805905?v=4", + "description": "A catalogue of available long read sequencing data analysis tools", "topics": [] }, { - "uid": "github/teuben/DataComb", - "url": "https://github.com/teuben/DataComb", - "rel": "/software/repository/github/teuben/DataComb", - "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", - "description": "Code for the DataComb paper", + "uid": "github/CPM-project/MCPM", + "url": "https://github.com/CPM-project/MCPM", + "rel": "/software/repository/github/CPM-project/MCPM", + "avatar": "https://avatars.githubusercontent.com/u/32932681?v=4", + "description": "Modified CPM method", "topics": [] }, { - "uid": "github/teuben/nemo", - "url": "https://github.com/teuben/nemo", - "rel": "/software/repository/github/teuben/nemo", - "avatar": "https://avatars.githubusercontent.com/u/3393049?v=4", - "description": "a Stellar Dynamics Toolbox (Not Everybody Must Observe)", + "uid": "github/rafaeleufrasio/lightning", + "url": "https://github.com/rafaeleufrasio/lightning", + "rel": "/software/repository/github/rafaeleufrasio/lightning", + "avatar": "https://avatars.githubusercontent.com/u/15216531?v=4", + "description": "Lightning SED Fitting Package", + "topics": [] + }, + { + "uid": "github/planck-npipe/hillipop", + "url": "https://github.com/planck-npipe/hillipop", + "rel": "/software/repository/github/planck-npipe/hillipop", + "avatar": "https://avatars.githubusercontent.com/u/75025933?v=4", + "description": "A cobaya high-ell likelihood polarized for planck 2020 data (NPIPE release)", "topics": [ - "galactic-astronomy", - "image-analysis", - "orbital-simulation", - "fits-files", - "tabular-data", - "nbody-gravity" + "cmb", + "likelihood", + "cobaya", + "planck" ] }, { - "uid": "github/scikit-hep/vector", - "url": "https://github.com/scikit-hep/vector", - "rel": "/software/repository/github/scikit-hep/vector", - "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", - "description": "Vector classes and utilities", + "uid": "github/planck-npipe/lollipop", + "url": "https://github.com/planck-npipe/lollipop", + "rel": "/software/repository/github/planck-npipe/lollipop", + "avatar": "https://avatars.githubusercontent.com/u/75025933?v=4", + "description": "A cobaya low-ell likelihood polarized for planck 2020 data (NPIPE release)", "topics": [ - "scikit-hep", - "vector" + "cmb", + "likelihood", + "cobaya", + "planck" ] }, { - "uid": "github/scikit-hep/iminuit", - "url": "https://github.com/scikit-hep/iminuit", - "rel": "/software/repository/github/scikit-hep/iminuit", - "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", - "description": "Jupyter-friendly Python interface for C++ MINUIT2", + "uid": "github/SERVIR/servir-aces", + "url": "https://github.com/SERVIR/servir-aces", + "rel": "/software/repository/github/SERVIR/servir-aces", + "avatar": "https://avatars.githubusercontent.com/u/8176548?v=4", + "description": "Agricultural Classification and Estimation Service", "topics": [ - "python", - "fitting", - "optimization", - "c-plus-plus", - "scikit-hep" + "agriculture", + "mapping", + "remote-sensing" ] }, { - "uid": "github/scikit-hep/pyhf", - "url": "https://github.com/scikit-hep/pyhf", - "rel": "/software/repository/github/scikit-hep/pyhf", - "avatar": "https://avatars.githubusercontent.com/u/23454624?v=4", - "description": "pure-Python HistFactory implementation with tensors and autodiff", + "uid": "github/yuefan98/nleis.py", + "url": "https://github.com/yuefan98/nleis.py", + "rel": "/software/repository/github/yuefan98/nleis.py", + "avatar": "https://avatars.githubusercontent.com/u/97193085?v=4", + "description": "A NLEIS toolbox for impedance.py that provides RC level nonlinear equivalent circuit modeling (nECM) and analysis", "topics": [ - "high-energy-physics", - "statistical-inference", - "scientific-computations", - "numpy", - "scipy", - "tensorflow", - "pytorch", - "asymptotic-formulas", - "statistics", - "frequentist-statistics", - "cls", - "histfactory", - "python", - "hep", - "hep-ex", - "scikit-hep", - "jax" + "eis", + "electrochemistry", + "2nd-nleis", + "lithium-ion-batteries", + "impedance-py", + "battery", + "fuel-cell" ] }, { - "uid": "github/mms-fcul/PypKa", - "url": "https://github.com/mms-fcul/PypKa", - "rel": "/software/repository/github/mms-fcul/PypKa", - "avatar": "https://avatars.githubusercontent.com/u/40458511?v=4", - "description": "A python module for flexible Poisson-Boltzmann based pKa calculations with proton tautomerism", + "uid": "github/funkyheatmap/funkyheatmap", + "url": "https://github.com/funkyheatmap/funkyheatmap", + "rel": "/software/repository/github/funkyheatmap/funkyheatmap", + "avatar": "https://avatars.githubusercontent.com/u/131779657?v=4", + "description": "Visualising data frames as funky heatmaps \ud83d\udcca", "topics": [] }, { - "uid": "github/martinsparre/XSHPipelineManager", - "url": "https://github.com/martinsparre/XSHPipelineManager", - "rel": "/software/repository/github/martinsparre/XSHPipelineManager", - "avatar": "https://avatars.githubusercontent.com/u/1378739?v=4", - "description": "A script to run the X-shooter pipeline", + "uid": "github/PdIPS/CBX", + "url": "https://github.com/PdIPS/CBX", + "rel": "/software/repository/github/PdIPS/CBX", + "avatar": "https://avatars.githubusercontent.com/u/128069149?v=4", + "description": null, "topics": [] }, { - "uid": "github/AlanRace/imzMLConverter", - "url": "https://github.com/AlanRace/imzMLConverter", - "rel": "/software/repository/github/AlanRace/imzMLConverter", - "avatar": "https://avatars.githubusercontent.com/u/1210117?v=4", - "description": "Tool for converting mass spectrometry data to the imzML format.", + "uid": "github/biolab/orange3", + "url": "https://github.com/biolab/orange3", + "rel": "/software/repository/github/biolab/orange3", + "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", + "description": "\ud83c\udf4a :bar_chart: :bulb: Orange: Interactive data analysis https://orange.biolab.si", "topics": [ - "imzml", - "converter", - "mass-spectrometry-imaging", - "converting-data" + "data-mining", + "data-science", + "machine-learning", + "data-visualization", + "orange", + "python", + "scikit-learn", + "numpy", + "scipy", + "pandas", + "decision-trees", + "clustering", + "visualization", + "orange3", + "random-forest", + "plotting", + "chart", + "classification", + "regression", + "visual-programming" ] }, { - "uid": "github/haimengzhao/magic-microlensing", - "url": "https://github.com/haimengzhao/magic-microlensing", - "rel": "/software/repository/github/haimengzhao/magic-microlensing", - "avatar": "https://avatars.githubusercontent.com/u/25528207?v=4", - "description": "MAGIC: Microlensing Analysis Guided by Intelligent Computation. A PyTorch framework for automatic analysis of realistic microlensing light curves.", + "uid": "github/biolab/orange3-network", + "url": "https://github.com/biolab/orange3-network", + "rel": "/software/repository/github/biolab/orange3-network", + "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", + "description": "\ud83c\udf4a \ud83d\udd78 Network analysis add-on for Orange data mining suite.", "topics": [ - "ai4science", - "astronomy", - "machine-learning", - "microlensing" + "orange", + "network", + "network-analysis", + "graph", + "clique", + "visualization" ] }, { - "uid": "github/duducosmos/pycosmicstar", - "url": "https://github.com/duducosmos/pycosmicstar", - "rel": "/software/repository/github/duducosmos/pycosmicstar", - "avatar": "https://avatars.githubusercontent.com/u/588188?v=4", - "description": "The Cosmic Star Formation Rate Model", + "uid": "github/biolab/orange-bio", + "url": "https://github.com/biolab/orange-bio", + "rel": "/software/repository/github/biolab/orange-bio", + "avatar": "https://avatars0.githubusercontent.com/u/555189?v=4", + "description": null, "topics": [] }, { - "uid": "github/dunnkers/fseval", - "url": "https://github.com/dunnkers/fseval", - "rel": "/software/repository/github/dunnkers/fseval", - "avatar": "https://avatars.githubusercontent.com/u/744430?v=4", - "description": "Benchmarking framework for Feature Selection and Feature Ranking algorithms \ud83d\ude80", + "uid": "github/colour-science/colour", + "url": "https://github.com/colour-science/colour", + "rel": "/software/repository/github/colour-science/colour", + "avatar": "https://avatars3.githubusercontent.com/u/8414607?v=4", + "description": "Colour Science for Python", "topics": [ - "benchmarks", - "feature-rankers", - "feature-selection", - "wandb", - "hydra", - "machine-learning", + "color", + "color-science", + "color-space", + "color-spaces", + "colorspace", + "colorspaces", + "colour", + "colour-science", + "colour-space", + "colour-spaces", + "colourspace", + "colourspaces", + "data", + "dataset", + "datasets", "python", - "feature-ranking", - "benchmarking", - "benchmarking-framework", - "scikit-learn", - "automl" + "spectral-data", + "spectral-dataset", + "spectral-datasets" ] }, { - "uid": "github/JuliaHelmecke/MetaboMAPS", - "url": "https://github.com/JKoblitz/MetaboMAPS", - "rel": "/software/repository/github/JuliaHelmecke/MetaboMAPS", - "avatar": "https://avatars.githubusercontent.com/u/22150395?v=4", - "description": "Data visualization on metabolic pathway maps.", - "topics": [] - }, - { - "uid": "github/aamedinburgh/igmtransmission", - "url": "https://github.com/aamedinburgh/igmtransmission", - "rel": "/software/repository/github/aamedinburgh/igmtransmission", - "avatar": "https://avatars.githubusercontent.com/u/11682418?v=4", - "description": "Automatically exported from code.google.com/p/igmtransmission", + "uid": "github/Sulstice/cocktail-shaker", + "url": "https://github.com/Sulstice/cocktail-shaker", + "rel": "/software/repository/github/Sulstice/cocktail-shaker", + "avatar": "https://avatars0.githubusercontent.com/u/11812946?v=4", + "description": null, "topics": [] }, { - "uid": "github/snugel/cas-offinder", - "url": "https://github.com/snugel/cas-offinder", - "rel": "/software/repository/github/snugel/cas-offinder", - "avatar": "https://avatars.githubusercontent.com/u/5906282?v=4", - "description": "An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.", + "uid": "github/vreverdy/magrathea-pathfinder", + "url": "https://github.com/vreverdy/magrathea-pathfinder", + "rel": "/software/repository/github/vreverdy/magrathea-pathfinder", + "avatar": "https://avatars.githubusercontent.com/u/6286317?v=4", + "description": "A 3D AMR high-performance framework to propagate photons in cosmological simulations", "topics": [] }, { - "uid": "github/tlancian/bio_cs", - "url": "https://github.com/tlancian/bio_cs", - "rel": "/software/repository/github/tlancian/bio_cs", - "avatar": "https://avatars.githubusercontent.com/u/31849244?v=4", - "description": "\"Contrast Subgraphs Allow Comparing Homogeneous and Heterogeneous Networks Derived from Omics Data\" - T. Lanciano, A. Savino, F. Porcu, D. Cittaro, F. Bonchi, P. Provero", + "uid": "github/aringlis/afino_release_version", + "url": "https://github.com/aringlis/afino_release_version", + "rel": "/software/repository/github/aringlis/afino_release_version", + "avatar": "https://avatars.githubusercontent.com/u/1757836?v=4", + "description": null, "topics": [] }, { - "uid": "github/nhcrisp/ADBSat", - "url": "https://github.com/nhcrisp/ADBSat", - "rel": "/software/repository/github/nhcrisp/ADBSat", - "avatar": "https://avatars.githubusercontent.com/u/40802736?v=4", - "description": "Aerodynamic Database for Satellites", + "uid": "github/surhudm/savitzky_golay_with_errors", + "url": "https://github.com/surhudm/savitzky_golay_with_errors", + "rel": "/software/repository/github/surhudm/savitzky_golay_with_errors", + "avatar": "https://avatars.githubusercontent.com/u/4392633?v=4", + "description": "Improving the Savitzky-Golay filtering in the presence of noisy data", "topics": [] }, { - "uid": "github/4pisky/fourpisky-core", - "url": "https://github.com/4pisky/fourpisky-core", - "rel": "/software/repository/github/4pisky/fourpisky-core", - "avatar": "https://avatars.githubusercontent.com/u/13047807?v=4", - "description": "Core code defining alert handling, etc for the 4PiSky voevent hub.", - "topics": [ - "voevent", - "transient-astronomy" - ] - }, - { - "uid": "github/CosmoTool/ECLIPSE", - "url": "https://github.com/CosmoTool/ECLIPSE", - "rel": "/software/repository/github/CosmoTool/ECLIPSE", - "avatar": "https://avatars.githubusercontent.com/u/82119585?v=4", - "description": null, + "uid": "github/surhudm/aum", + "url": "https://github.com/surhudm/aum", + "rel": "/software/repository/github/surhudm/aum", + "avatar": "https://avatars.githubusercontent.com/u/4392633?v=4", + "description": "aum", "topics": [] }, { - "uid": "github/sverhoeven/docker-cartodb", - "url": "https://github.com/sverhoeven/docker-cartodb", - "rel": "/software/repository/github/sverhoeven/docker-cartodb", - "avatar": "https://avatars1.githubusercontent.com/u/1713488?v=4", - "description": "Dockerized CartoDB", + "uid": "github/nickrodd/HDMSpectra", + "url": "https://github.com/nickrodd/HDMSpectra", + "rel": "/software/repository/github/nickrodd/HDMSpectra", + "avatar": "https://avatars.githubusercontent.com/u/13380467?v=4", + "description": "Dark Matter Spectra from the Electroweak to the Planck Scale", "topics": [] }, { - "uid": "github/rizkg/BBHash", - "url": "https://github.com/rizkg/BBHash", - "rel": "/software/repository/github/rizkg/BBHash", - "avatar": "https://avatars.githubusercontent.com/u/16080526?v=4", - "description": "Bloom-filter based minimal perfect hash function library", + "uid": "github/dragontaoran/sleev", + "url": "https://github.com/dragontaoran/sleev", + "rel": "/software/repository/github/dragontaoran/sleev", + "avatar": "https://avatars.githubusercontent.com/u/23112873?v=4", + "description": "Combination of logreg2ph and TwoPhaseReg", "topics": [] }, { - "uid": "github/KenethGarcia/ClassiPyGRB", - "url": "https://github.com/KenethGarcia/ClassiPyGRB", - "rel": "/software/repository/github/KenethGarcia/ClassiPyGRB", - "avatar": "https://avatars.githubusercontent.com/u/102555105?v=4", - "description": "This repository contains all the updates, code, and documentation related to ClassiPyGRB.", + "uid": "github/pfeinsper/drone-swarm-search", + "url": "https://github.com/pfeinsper/drone-swarm-search", + "rel": "/software/repository/github/pfeinsper/drone-swarm-search", + "avatar": "https://avatars.githubusercontent.com/u/81260905?v=4", + "description": "The Drone Swarm Search project provides an environment for SAR missions built on PettingZoo, where agents, represented by drones, are tasked with locating targets identified as shipwrecked individuals.", "topics": [ - "grbs", - "machine-learning", - "machine-learning-algorithms", - "astrophysics", - "unsupervised-learning", - "unsupervised-machine-learning" + "pettingzoo", + "rl", + "ai", + "pygame", + "python", + "multi-agent-reinforcement-learning", + "multiagent-reinforcement-learning" ] }, { - "uid": "github/PEREGRINE-GW/peregrine", - "url": "https://github.com/PEREGRINE-GW/peregrine", - "rel": "/software/repository/github/PEREGRINE-GW/peregrine", - "avatar": "https://avatars.githubusercontent.com/u/140732115?v=4", - "description": "A simulation-based Inference (SBI) library designed to perform analysis on a wide class of gravitational wave signals", - "topics": [ - "algorithm", - "gravitational-waves", - "inference", - "machine-learning", - "neural-ratio-estimation", - "parameter-estimation", - "python", - "pytorch-lightning", - "simulation-based-inference" - ] + "uid": "github/AusSRC/SoFiAX", + "url": "https://github.com/AusSRC/SoFiAX", + "rel": "/software/repository/github/AusSRC/SoFiAX", + "avatar": "https://avatars.githubusercontent.com/u/62991148?v=4", + "description": "Source finding application executor", + "topics": [] }, { - "uid": "github/PEREGRINE-GW/saqqara", - "url": "https://github.com/PEREGRINE-GW/saqqara", - "rel": "/software/repository/github/PEREGRINE-GW/saqqara", - "avatar": "https://avatars.githubusercontent.com/u/140732115?v=4", - "description": " A simulation-based Inference (SBI) library designed for stochastic gravitational wave background data analysis", + "uid": "github/leprojetcastor/castor", + "url": "https://github.com/leprojetcastor/castor", + "rel": "/software/repository/github/leprojetcastor/castor", + "avatar": "https://avatars.githubusercontent.com/u/75743001?v=4", + "description": null, "topics": [] }, { - "uid": "github/TransDecoder/wiki", - "url": null, - "rel": "/software/repository/github/TransDecoder/wiki", - "avatar": "", - "description": "identifies candidate coding regions within transcript sequences, such as those generated by de novo RNA-Seq transcript assembly using Trinity, or constructed based on RNA-Seq alignments to the genome using Tophat and Cufflinks.", + "uid": "github/JeffLuo9/Hep_Ploidy_protocol", + "url": "https://github.com/JeffLuo9/Hep_Ploidy_protocol", + "rel": "/software/repository/github/JeffLuo9/Hep_Ploidy_protocol", + "avatar": "https://avatars.githubusercontent.com/u/218604512?v=4", + "description": "Hepatocyte ploidy protocol", "topics": [] }, { - "uid": "github/JuliaGeometry/DelaunayTriangulation.jl", - "url": "https://github.com/JuliaGeometry/DelaunayTriangulation.jl", - "rel": "/software/repository/github/JuliaGeometry/DelaunayTriangulation.jl", - "avatar": "https://avatars.githubusercontent.com/u/10924607?v=4", - "description": "DelaunayTriangulation.jl: A Julia package for Delaunay triangulations and Voronoi tessellations in the plane", + "uid": "github/VirtualPlanetaryLaboratory/vplanet", + "url": "https://github.com/VirtualPlanetaryLaboratory/vplanet", + "rel": "/software/repository/github/VirtualPlanetaryLaboratory/vplanet", + "avatar": "https://avatars.githubusercontent.com/u/6665798?v=4", + "description": "The Virtual Planet Simulator", "topics": [ - "delaunay-triangulation", - "tessellation", - "triangulation", - "computational-geometry", - "geometry", - "voronoi", - "voronoi-diagram", - "delaunay", - "meshing", - "power-diagram" + "habitability", + "n-body-simulator", + "galaxies", + "geophysics", + "orbits", + "tides", + "binary-stars", + "rotation", + "atmospheres", + "magnetic-fields", + "climate", + "exoplanets", + "stellar", + "geochemistry", + "atmospheric-escape", + "planetary-science", + "stellar-astrophysics", + "astrobiology" ] }, { - "uid": "github/GoekeLab/xpore", - "url": "https://github.com/GoekeLab/xpore", - "rel": "/software/repository/github/GoekeLab/xpore", - "avatar": "https://avatars.githubusercontent.com/u/46366103?v=4", - "description": "Identification of differential RNA modifications from nanopore direct RNA sequencing", - "topics": [ - "rna", - "modification", - "transcriptomics", - "machine-learning", - "genomics", - "nanopore-sequencing", - "rna-seq", - "rna-modifications", - "nanopore", - "python" - ] + "uid": "github/VirtualPlanetaryLaboratory/atmos", + "url": "https://github.com/VirtualPlanetaryLaboratory/atmos", + "rel": "/software/repository/github/VirtualPlanetaryLaboratory/atmos", + "avatar": "https://avatars.githubusercontent.com/u/6665798?v=4", + "description": null, + "topics": [] }, { - "uid": "github/ndaniel/fusioncatcher", - "url": "https://github.com/ndaniel/fusioncatcher", - "rel": "/software/repository/github/ndaniel/fusioncatcher", - "avatar": "https://avatars.githubusercontent.com/u/161419?v=4", - "description": "Finder of Somatic Fusion Genes in RNA-seq data", + "uid": "github/tbep-tech/tbeptools", + "url": "https://github.com/tbep-tech/tbeptools", + "rel": "/software/repository/github/tbep-tech/tbeptools", + "avatar": "https://avatars.githubusercontent.com/u/49565964?v=4", + "description": "R package for Tampa Bay Estuary Program functions", "topics": [ - "rna-seq", - "fusion-genes", - "somatic-fusion-genes" + "package", + "data-analysis", + "water-quality", + "tbep", + "tampa-bay" ] }, { - "uid": "github/Krona/wiki", - "url": null, - "rel": "/software/repository/github/Krona/wiki", - "avatar": "", - "description": "is a set of scripts to create Krona charts from several Bioinformatics tools as well as from text and XML files.", + "uid": "github/bic-nirrh/precocity", + "url": "https://github.com/bic-nirrh/precocity", + "rel": "/software/repository/github/bic-nirrh/precocity", + "avatar": "https://avatars.githubusercontent.com/u/56425008?v=4", + "description": "Database and enrichment analysis of genes associated with precocious puberty", "topics": [] }, { - "uid": "github/skovaka/UNCALLED", - "url": "https://github.com/skovaka/UNCALLED", - "rel": "/software/repository/github/skovaka/UNCALLED", - "avatar": "https://avatars.githubusercontent.com/u/1577544?v=4", - "description": "Raw nanopore signal mapper that enables real-time targeted sequencing", + "uid": "github/patrickwest/EukRep", + "url": "https://github.com/patrickwest/EukRep", + "rel": "/software/repository/github/patrickwest/EukRep", + "avatar": "https://avatars.githubusercontent.com/u/21266477?v=4", + "description": "Classification of Eukaryotic and Prokaryotic sequences from metagenomic datasets", "topics": [] }, { - "uid": "github/fuyw-aisw/GALA", - "url": "https://github.com/fuyw-aisw/GALA", - "rel": "/software/repository/github/fuyw-aisw/GALA", - "avatar": "https://avatars.githubusercontent.com/u/118046924?v=4", + "uid": "github/cameronliang/BayesVP", + "url": "https://github.com/cameronliang/bayesvp", + "rel": "/software/repository/github/cameronliang/BayesVP", + "avatar": "https://avatars.githubusercontent.com/u/18225386?v=4", "description": null, "topics": [] }, { - "uid": "github/geoelements/gns", - "url": "https://github.com/geoelements/gns", - "rel": "/software/repository/github/geoelements/gns", - "avatar": "https://avatars.githubusercontent.com/u/76979620?v=4", - "description": "Graph Network Simulator", - "topics": [ - "graph-network-simulator", - "deep-learning", - "machine-learning", - "pytorch" - ] - }, - { - "uid": "github/RuiningZHAO/wcpy", - "url": "https://github.com/RuiningZHAO/wcpy", - "rel": "/software/repository/github/RuiningZHAO/wcpy", - "avatar": "https://avatars.githubusercontent.com/u/16609408?v=4", - "description": "A UI for wavelength calibration.", + "uid": "github/bhorowitz/HyPhy-public", + "url": "https://github.com/bhorowitz/HyPhy-public", + "rel": "/software/repository/github/bhorowitz/HyPhy-public", + "avatar": "https://avatars.githubusercontent.com/u/6059772?v=4", + "description": "Deep generative model for painting hydrodynamical physics onto dark matter simulations", "topics": [] }, { - "uid": "github/jonas/tig", - "url": "https://github.com/jonas/tig", - "rel": "/software/repository/github/jonas/tig", - "avatar": "https://avatars.githubusercontent.com/u/8417?v=4", - "description": "Text-mode interface for git", - "topics": [ - "git", - "c", - "ncurses", - "tui" - ] + "uid": "github/qianlivan/RPPPS", + "url": "https://github.com/qianlivan/RPPPS", + "rel": "/software/repository/github/qianlivan/RPPPS", + "avatar": "https://avatars.githubusercontent.com/u/15792950?v=4", + "description": null, + "topics": [] }, { - "uid": "github/cameron314/concurrentqueue", - "url": "https://github.com/cameron314/concurrentqueue", - "rel": "/software/repository/github/cameron314/concurrentqueue", - "avatar": "https://avatars.githubusercontent.com/u/116235?v=4", - "description": "A fast multi-producer, multi-consumer lock-free concurrent queue for C++11", + "uid": "github/sosl/H-FISTA", + "url": "https://github.com/sosl/H-FISTA", + "rel": "/software/repository/github/sosl/H-FISTA", + "avatar": "https://avatars.githubusercontent.com/u/1500982?v=4", + "description": "Hierarchical FISTA - phase retrieval for pulsar spectroscopy", "topics": [] }, { - "uid": "github/mlpack/mlpack", - "url": "https://github.com/mlpack/mlpack", - "rel": "/software/repository/github/mlpack/mlpack", - "avatar": "https://avatars0.githubusercontent.com/u/10216045?v=4", - "description": "mlpack: a scalable C++ machine learning library -- ", + "uid": "github/sbebo/joypy", + "url": "https://github.com/leotac/joypy", + "rel": "/software/repository/github/sbebo/joypy", + "avatar": "https://avatars.githubusercontent.com/u/1311290?v=4", + "description": "Joyplots in Python with matplotlib & pandas :chart_with_upwards_trend:", "topics": [ - "machine-learning-library", - "c-plus-plus", - "deep-learning", - "nearest-neighbor-search", - "regression", - "machine-learning" + "data-visualization", + "python", + "matplotlib", + "plotting" ] }, { - "uid": "github/labgem/PPanGGOLiN", - "url": "https://github.com/labgem/PPanGGOLiN", - "rel": "/software/repository/github/labgem/PPanGGOLiN", - "avatar": "https://avatars.githubusercontent.com/u/50515420?v=4", - "description": "Build a partitioned pangenome graph from microbial genomes", - "topics": [ - "comparative-genomics", - "bioinformatics", - "microbial-genomics", - "microbiology", - "bacteria", - "pangenome" - ] + "uid": "github/yuansh3354/CaSee", + "url": "https://github.com/yuansh3354/CaSee", + "rel": "/software/repository/github/yuansh3354/CaSee", + "avatar": "https://avatars.githubusercontent.com/u/65653560?v=4", + "description": null, + "topics": [] }, { - "uid": "github/esteinig/nanoq", - "url": "https://github.com/esteinig/nanoq", - "rel": "/software/repository/github/esteinig/nanoq", - "avatar": "https://avatars.githubusercontent.com/u/12873366?v=4", - "description": "Minimal but speedy quality control for nanopore reads in Rust :bear:", + "uid": "github/SAIL-Labs/PIRATES", + "url": "https://github.com/SAIL-Labs/PIRATES", + "rel": "/software/repository/github/SAIL-Labs/PIRATES", + "avatar": "https://avatars.githubusercontent.com/u/19316639?v=4", + "description": "Code for the PIRATES image reconstruction paper", "topics": [] }, { - "uid": "github/rickhelmus/patRoon", - "url": "https://github.com/rickhelmus/patRoon", - "rel": "/software/repository/github/rickhelmus/patRoon", - "avatar": "https://avatars.githubusercontent.com/u/37015911?v=4", - "description": "Workflow solutions for mass-spectrometry based non-target analysis.", + "uid": "github/SAIL-Labs/AMICAL", + "url": "https://github.com/SAIL-Labs/AMICAL", + "rel": "/software/repository/github/SAIL-Labs/AMICAL", + "avatar": "https://avatars.githubusercontent.com/u/19316639?v=4", + "description": "Extraction pipeline and analysis tools for Aperture Masking Interferometry mode of the last generation of instruments (ground-based and space).", "topics": [ - "mass-spectrometry", - "r", - "non-target" + "instrumentation", + "pipelines", + "interferometry", + "data-processing", + "jwst", + "eso-vlt" ] }, { - "uid": "github/Tomoaki-Ishiyama/mpi-rockstar", - "url": "https://github.com/Tomoaki-Ishiyama/mpi-rockstar", - "rel": "/software/repository/github/Tomoaki-Ishiyama/mpi-rockstar", - "avatar": "https://avatars.githubusercontent.com/u/50941374?v=4", - "description": "MPI-Rockstar: a Hybrid MPI and OpenMP Parallel Implementation of the Rockstar Halo finder", - "topics": [] + "uid": "github/krab1k/ChargeFW2", + "url": "https://github.com/krab1k/ChargeFW2", + "rel": "/software/repository/github/krab1k/ChargeFW2", + "avatar": "https://avatars.githubusercontent.com/u/16164737?v=4", + "description": "The core part of Atomic Charge Calculator II.", + "topics": [ + "charges" + ] }, { - "uid": "github/bertrandplez/Turbospectrum_NLTE", - "url": "https://github.com/bertrandplez/Turbospectrum_NLTE", - "rel": "/software/repository/github/bertrandplez/Turbospectrum_NLTE", - "avatar": "https://avatars.githubusercontent.com/u/30231362?v=4", - "description": "Turbospectrum v20 with NLTE capability", - "topics": [] + "uid": "github/arup-group/pam", + "url": "https://github.com/arup-group/pam", + "rel": "/software/repository/github/arup-group/pam", + "avatar": "https://avatars.githubusercontent.com/u/59966781?v=4", + "description": "Generate and modify transport demand scenarios via a Python API.", + "topics": [ + "cml", + "transit", + "arup", + "city-modelling", + "city-modelling-lab" + ] }, { - "uid": "github/bertrandplez/Turbospectrum2019", - "url": "https://github.com/bertrandplez/Turbospectrum2019", - "rel": "/software/repository/github/bertrandplez/Turbospectrum2019", - "avatar": "https://avatars.githubusercontent.com/u/30231362?v=4", - "description": "synthetic spectrum calculation companion to MARCS", + "uid": "github/simoncasassus/ConeRot", + "url": "https://github.com/simoncasassus/ConeRot", + "rel": "/software/repository/github/simoncasassus/ConeRot", + "avatar": "https://avatars.githubusercontent.com/u/22455693?v=4", + "description": null, "topics": [] }, { - "uid": "github/ladsantos/p-winds", - "url": "https://github.com/ladsantos/p-winds", - "rel": "/software/repository/github/ladsantos/p-winds", - "avatar": "https://avatars.githubusercontent.com/u/2818188?v=4", - "description": "Python implementation of Parker wind models for exoplanet atmospheres", - "topics": [ - "astronomy", - "exoplanet", - "exoplanet-atmospheres", - "atmosphere", - "astrophysics" - ] + "uid": "github/AnitaPetzler/AMOEBA", + "url": "https://github.com/AnitaPetzler/AMOEBA", + "rel": "/software/repository/github/AnitaPetzler/AMOEBA", + "avatar": "https://avatars.githubusercontent.com/u/39294322?v=4", + "description": "Automated Molecular Excitation Bayesian line-fitting Algorithm", + "topics": [] }, { - "uid": "github/ladsantos/flatstar", - "url": "https://github.com/ladsantos/flatstar", - "rel": "/software/repository/github/ladsantos/flatstar", - "avatar": "https://avatars.githubusercontent.com/u/2818188?v=4", - "description": "Make 2d intensity maps of limb-darkened stars.", + "uid": "github/horovod/horovod", + "url": "https://github.com/horovod/horovod", + "rel": "/software/repository/github/horovod/horovod", + "avatar": "https://avatars.githubusercontent.com/u/46361271?v=4", + "description": "Distributed training framework for TensorFlow, Keras, PyTorch, and Apache MXNet.", "topics": [ - "astronomy", - "limb-darkening", - "stars", - "astrophysics", - "planetary-transits" + "tensorflow", + "uber", + "machine-learning", + "machinelearning", + "mpi", + "baidu", + "deep-learning", + "deeplearning", + "keras", + "pytorch", + "mxnet", + "spark", + "ray" ] }, { - "uid": "github/bodenlab/GRASP", - "url": "https://github.com/bodenlab/GRASP", - "rel": "/software/repository/github/bodenlab/GRASP", - "avatar": "https://avatars.githubusercontent.com/u/13028136?v=4", - "description": "Graphical Representation of Ancestral Sequence Predictions", + "uid": "github/nigyta/dfast_core", + "url": "https://github.com/nigyta/dfast_core", + "rel": "/software/repository/github/nigyta/dfast_core", + "avatar": "https://avatars.githubusercontent.com/u/30499043?v=4", + "description": "is a flexible and customizable pipeline for prokaryotic genome annotation as well as data submission to the INSDC.", "topics": [] }, { - "uid": "github/DRMacIver/shrinkray", - "url": "https://github.com/DRMacIver/shrinkray", - "rel": "/software/repository/github/DRMacIver/shrinkray", - "avatar": "https://avatars.githubusercontent.com/u/28623?v=4", - "description": "Shrink Ray is a new test-case reducer designed to be effective on a wide range of formats", + "uid": "github/infer-actively/pymdp", + "url": "https://github.com/infer-actively/pymdp", + "rel": "/software/repository/github/infer-actively/pymdp", + "avatar": "https://avatars.githubusercontent.com/u/75545318?v=4", + "description": "A Python implementation of active inference for Markov Decision Processes", "topics": [] }, { - "uid": "github/astrocatalogs/astrocats", - "url": "https://github.com/astrocatalogs/astrocats", - "rel": "/software/repository/github/astrocatalogs/astrocats", - "avatar": "https://avatars.githubusercontent.com/u/16644580?v=4", - "description": "Astrocats package for constructing astronomical catalogs", + "uid": "github/andreasmang/claire", + "url": "https://github.com/andreasmang/claire", + "rel": "/software/repository/github/andreasmang/claire", + "avatar": "https://avatars.githubusercontent.com/u/13557296?v=4", + "description": "Constrained Large Deformation Diffeomorphic Image Registration (CLAIRE)", "topics": [ - "catalog", - "open-astronomy-catalogs" + "image-registration", + "parallel-computing", + "medical-image-computing" ] }, { - "uid": "github/kgullikson88/Companion-Finder", - "url": "https://github.com/kgullikson88/Companion-Finder", - "rel": "/software/repository/github/kgullikson88/Companion-Finder", - "avatar": "https://avatars.githubusercontent.com/u/6162186?v=4", - "description": "A set of scripts for looking for planets and binary companions in time series spectra", - "topics": [] - }, - { - "uid": "github/kgullikson88/Telluric-Fitter", - "url": "https://github.com/kgullikson88/Telluric-Fitter", - "rel": "/software/repository/github/kgullikson88/Telluric-Fitter", - "avatar": "https://avatars.githubusercontent.com/u/6162186?v=4", - "description": "Telluric fitting made easy", + "uid": "github/OSU-BMBL/IDAM", + "url": "https://github.com/OSU-BMBL/IDAM", + "rel": "/software/repository/github/OSU-BMBL/IDAM", + "avatar": "https://avatars.githubusercontent.com/u/46255124?v=4", + "description": "Infer disease-associated microbial biomarkers based on metagenomic and metatranscriptomic data", "topics": [] }, { - "uid": "github/ACTCollaboration/zCluster", - "url": "https://github.com/ACTCollaboration/zCluster", - "rel": "/software/repository/github/ACTCollaboration/zCluster", - "avatar": "https://avatars.githubusercontent.com/u/8562336?v=4", - "description": "A package for measuring galaxy cluster photometric redshifts using data from large public surveys.", + "uid": "github/sustainableaviation/jetfuelburn", + "url": "https://github.com/sustainableaviation/jetfuelburn", + "rel": "/software/repository/github/sustainableaviation/jetfuelburn", + "avatar": "https://avatars.githubusercontent.com/u/139961793?v=4", + "description": "\ud83d\udee2\ufe0f\ud83d\udee9\ufe0f Calculation toolkit for aircraft fuel consumption", "topics": [ - "astrophysics", - "python" + "aviation", + "fuel", + "lca" ] }, { - "uid": "github/fAndreuzzi/BisPy", - "url": "https://github.com/fAndreuzzi/BisPy", - "rel": "/software/repository/github/fAndreuzzi/BisPy", - "avatar": "https://avatars.githubusercontent.com/u/8464342?v=4", - "description": "BisPy - A bisimulation library for Python.", + "uid": "github/mswzeus/TargetNet", + "url": "https://github.com/mswzeus/TargetNet", + "rel": "/software/repository/github/mswzeus/TargetNet", + "avatar": "https://avatars.githubusercontent.com/u/49700882?v=4", + "description": "Official Pytorch implementation of TargetNet, Bioinformatics 2022", "topics": [ - "bisimulation", - "graph-algorithms", - "graph-theory", - "algorithms" + "targetnet", + "microrna-target-prediction", + "pytorch" ] }, { - "uid": "github/SatelliteShorelines/CoastSeg", - "url": "https://github.com/SatelliteShorelines/CoastSeg", - "rel": "/software/repository/github/SatelliteShorelines/CoastSeg", - "avatar": "https://avatars.githubusercontent.com/u/113170084?v=4", - "description": "An interactive toolbox for downloading satellite imagery, applying image segmentation models, mapping shoreline positions and more. The mapping extension for CoastSat and Zoo.", + "uid": "github/wfondrie/mokapot", + "url": "https://github.com/wfondrie/mokapot", + "rel": "/software/repository/github/wfondrie/mokapot", + "avatar": "https://avatars.githubusercontent.com/u/9124668?v=4", + "description": "Fast and flexible semi-supervised learning for peptide detection in Python", "topics": [ - "earth-engine", - "jupyter", + "proteomics", + "machine-learning", + "bioinformatics", "python", - "landsat", - "colab" + "conda", + "peptide-detection", + "percolator" ] }, { - "uid": "github/AMReX-Astro/Nyx", - "url": "https://github.com/AMReX-Astro/Nyx", - "rel": "/software/repository/github/AMReX-Astro/Nyx", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "An adaptive mesh, N-body hydro cosmological simulation code", + "uid": "github/mes5k/amap-align", + "url": "https://github.com/mes5k/amap-align", + "rel": "/software/repository/github/mes5k/amap-align", + "avatar": "https://avatars.githubusercontent.com/u/492641?v=4", + "description": "Automatically exported from code.google.com/p/amap-align", "topics": [] }, { - "uid": "github/AMReX-Astro/Castro", - "url": "https://github.com/AMReX-Astro/Castro", - "rel": "/software/repository/github/AMReX-Astro/Castro", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "Castro (Compressible Astrophysics): An adaptive mesh, astrophysical compressible (radiation-, magneto-) hydrodynamics simulation code for massively parallel CPU and GPU architectures.", - "topics": [ - "hydrodynamics", - "cfd", - "pde", - "gravity", - "radiation", - "castro", - "amr", - "adaptive-mesh-refinement", - "reactions", - "astrophysical-simulation", - "astrophysics" - ] + "uid": "github/openscm/openscm-twolayermodel", + "url": "https://github.com/openscm/openscm-twolayermodel", + "rel": "/software/repository/github/openscm/openscm-twolayermodel", + "avatar": "https://avatars.githubusercontent.com/u/62363211?v=4", + "description": "Implementations of two-layer models by Held et al. and Geoffroy et al.", + "topics": [] }, { - "uid": "github/AMReX-Astro/MAESTROeX", - "url": "https://github.com/AMReX-Astro/MAESTROeX", - "rel": "/software/repository/github/AMReX-Astro/MAESTROeX", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "A C++ low Mach number stellar hydrodynamics code", + "uid": "github/fitbenchmarking/fitbenchmarking", + "url": "https://github.com/fitbenchmarking/fitbenchmarking", + "rel": "/software/repository/github/fitbenchmarking/fitbenchmarking", + "avatar": "https://avatars.githubusercontent.com/u/49585251?v=4", + "description": "Tool for comparing the run time and accuracy of minimizers on fit benchmarking problems", "topics": [] }, { - "uid": "github/AMReX-Astro/wdmerger", - "url": "https://github.com/AMReX-Astro/wdmerger", - "rel": "/software/repository/github/AMReX-Astro/wdmerger", - "avatar": "https://avatars.githubusercontent.com/u/28324385?v=4", - "description": "A software package for simulating white dwarf mergers with CASTRO", + "uid": "github/ZhaoXM-Lab/metaMIC", + "url": "https://github.com/ZhaoXM-Lab/metaMIC", + "rel": "/software/repository/github/ZhaoXM-Lab/metaMIC", + "avatar": "https://avatars.githubusercontent.com/u/85596707?v=4", + "description": "Assessing and Improving the quality of metagenomic assemblies", "topics": [] }, { - "uid": "github/cds-astro/mocpy", - "url": "https://github.com/cds-astro/mocpy", - "rel": "/software/repository/github/cds-astro/mocpy", - "avatar": "https://avatars.githubusercontent.com/u/26145382?v=4", - "description": "Python library to easily create and manipulate MOCs (Multi-Order Coverage maps)", + "uid": "github/ANP-Granular/ParticleTracking", + "url": "https://github.com/ANP-Granular/ParticleTracking", + "rel": "/software/repository/github/ANP-Granular/ParticleTracking", + "avatar": "https://avatars.githubusercontent.com/u/110225052?v=4", + "description": "Library and GUI for tracking (rod-like) particles on camera images in 2D and 3D", "topics": [ - "astronomy", - "astronomy-astrophysics", - "tesselation", - "healpix", - "moc", - "astrophysics", - "astropy-affiliated", - "gravitational-waves", - "open-source", - "python" + "3d-reconstruction", + "microgravity", + "object-detection", + "physics" ] }, { - "uid": "github/YSOVAR/YSOVAR", - "url": "https://github.com/YSOVAR/YSOVAR", - "rel": "/software/repository/github/YSOVAR/YSOVAR", - "avatar": "https://avatars.githubusercontent.com/u/3372001?v=4", - "description": "Analyze YSOVAR lightcurves", + "uid": "github/odb9402/CNNPeaks", + "url": "https://github.com/odb9402/CNNPeaks", + "rel": "/software/repository/github/odb9402/CNNPeaks", + "avatar": "https://avatars.githubusercontent.com/u/23442419?v=4", + "description": "The ChIP-Seq peak calling algorithm using convolution neural networks", "topics": [ - "python", - "astronomy", - "time-series", - "data-analysis" + "cnn-model", + "nvidia-docker", + "tensorflow", + "bioinformatics", + "chip-seq", + "peak-calling", + "convolutional-neural-network", + "gpu", + "docker-image", + "progressbar2", + "samtools", + "ngs-analysis", + "atac-seq" ] }, { - "uid": "github/baker-laboratory/RoseTTAFold-All-Atom", - "url": "https://github.com/baker-laboratory/RoseTTAFold-All-Atom", - "rel": "/software/repository/github/baker-laboratory/RoseTTAFold-All-Atom", - "avatar": "https://avatars.githubusercontent.com/u/117964973?v=4", - "description": "RoseTTAFold All-Atom is a biomolecular structure prediction neural network that can predict a broad range of biomolecular assemblies.", + "uid": "github/soichiro-hattori/unpopular", + "url": "https://github.com/soichiro-hattori/unpopular", + "rel": "/software/repository/github/soichiro-hattori/unpopular", + "avatar": "https://avatars.githubusercontent.com/u/4204544?v=4", + "description": "An implementation of the Causal Pixel Model (CPM) for TESS data.", "topics": [] }, { - "uid": "github/villrv/SuperRAENN", - "url": "https://github.com/villrv/SuperRAENN", - "rel": "/software/repository/github/villrv/SuperRAENN", - "avatar": "https://avatars.githubusercontent.com/u/3867995?v=4", - "description": "A recurrent autoencoder neural network-based classifier for SN light curves.", + "uid": "github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", + "url": "https://github.com/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", + "rel": "/software/repository/github/luispinos/Exploring-the-interest-for-specific-courses-bias-in-course-effect-modelling", + "avatar": "https://avatars.githubusercontent.com/u/45032287?v=4", + "description": "This project contains the R scripts needed to replicate the results for the conference paper: Modelling the effect of courses over soft skills: A simulation study, presented at AERA 2023 Chicago by Pinos Ullauri L.A., Fleury A., Van den Noortgate W., Lebis A., Vermeulen M., Karami A.", "topics": [] }, { - "uid": "github/msaland/THInCR-Suite", - "url": "https://github.com/msaland/THInCR-Suite", - "rel": "/software/repository/github/msaland/THInCR-Suite", - "avatar": "https://avatars.githubusercontent.com/u/101999143?v=4", - "description": null, + "uid": "github/HingeAssembler/HINGE", + "url": "https://github.com/HingeAssembler/HINGE", + "rel": "/software/repository/github/HingeAssembler/HINGE", + "avatar": "https://avatars.githubusercontent.com/u/26515746?v=4", + "description": "Software accompanying \"HINGE: Long-Read Assembly Achieves Optimal Repeat Resolution\"", + "topics": [ + "genome-assembly" + ] + }, + { + "uid": "github/marbl/Krona", + "url": "https://github.com/marbl/Krona", + "rel": "/software/repository/github/marbl/Krona", + "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", + "description": "Interactively explore metagenomes and more from a web browser.", "topics": [] }, { - "uid": "github/MADHATdm/MADHAT", - "url": "https://github.com/MADHATdm/MADHAT", - "rel": "/software/repository/github/MADHATdm/MADHAT", - "avatar": "https://avatars.githubusercontent.com/u/55260798?v=4", - "description": "Model-Agnostic Dark Halo Analysis Tool", + "uid": "github/marbl/Mash", + "url": "https://github.com/marbl/Mash", + "rel": "/software/repository/github/marbl/Mash", + "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", + "description": "Fast genome and metagenome distance estimation using MinHash", "topics": [] }, { - "uid": "github/odelaneau/shapeit4", - "url": "https://github.com/odelaneau/shapeit4", - "rel": "/software/repository/github/odelaneau/shapeit4", - "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", - "description": "Segmented HAPlotype Estimation and Imputation Tool", + "uid": "github/marbl/MashMap", + "url": "https://github.com/marbl/MashMap", + "rel": "/software/repository/github/marbl/MashMap", + "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", + "description": "A fast approximate aligner for long DNA sequences", "topics": [] }, { - "uid": "github/odelaneau/GLIMPSE", - "url": "https://github.com/odelaneau/GLIMPSE", - "rel": "/software/repository/github/odelaneau/GLIMPSE", - "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", - "description": "Low Coverage Calling of Genotypes", + "uid": "github/marbl/Winnowmap", + "url": "https://github.com/marbl/Winnowmap", + "rel": "/software/repository/github/marbl/Winnowmap", + "avatar": "https://avatars.githubusercontent.com/u/6492934?v=4", + "description": "Long read / genome alignment software", + "topics": [ + "pacbio", + "nanopore", + "genome-analysis" + ] + }, + { + "uid": "github/dbosul/CWITools", + "url": "https://github.com/dbosul/cwitools", + "rel": "/software/repository/github/dbosul/CWITools", + "avatar": "https://avatars.githubusercontent.com/u/18314184?v=4", + "description": "Tools for Cosmic Web Imager Data", "topics": [] }, { - "uid": "github/odelaneau/shapeit5", - "url": "https://github.com/odelaneau/shapeit5", - "rel": "/software/repository/github/odelaneau/shapeit5", - "avatar": "https://avatars.githubusercontent.com/u/16349601?v=4", - "description": "Segmented HAPlotype Estimation and Imputation Tool", - "topics": [ - "bioinformatics", - "haplotype", - "phasing", - "sequencing" - ] - }, - { - "uid": "github/amanchokshi/EMBERS", - "url": "https://github.com/amanchokshi/EMBERS", - "rel": "/software/repository/github/amanchokshi/EMBERS", - "avatar": "https://avatars2.githubusercontent.com/u/40157844?v=4", - "description": "Experimental Measurement of BEam Responses with Satellites", - "topics": [ - "radio-astronomy", - "satellites", - "telescope", - "murchison-widefield-array" - ] + "uid": "github/warrickball/tomso", + "url": "https://github.com/warrickball/tomso", + "rel": "/software/repository/github/warrickball/tomso", + "avatar": "https://avatars.githubusercontent.com/u/20858744?v=4", + "description": "TOMSO (Tools for Models of Stars and their Oscillations) is a set of Python modules for loading and saving input and output files for and from stellar evolution and oscillation codes.", + "topics": [] }, { - "uid": "github/wfondrie/mokapot", - "url": "https://github.com/wfondrie/mokapot", - "rel": "/software/repository/github/wfondrie/mokapot", - "avatar": "https://avatars.githubusercontent.com/u/9124668?v=4", - "description": "Fast and flexible semi-supervised learning for peptide detection in Python", + "uid": "github/fzagaria/COpops", + "url": "https://github.com/fzagaria/COpops", + "rel": "/software/repository/github/fzagaria/COpops", + "avatar": "https://avatars.githubusercontent.com/u/124464817?v=4", + "description": "A Jupyter notebook with a simple class to compute CO sizes and fluxes using the semi-analytical method developed by Zagaria et al. (2023b).", "topics": [ - "proteomics", - "machine-learning", - "bioinformatics", - "python", - "conda", - "peptide-detection", - "percolator" + "interferometry", + "jupyter-notebook", + "modelling", + "population-synthesis", + "protoplanetary-discs", + "python" ] }, { - "uid": "github/JIBSIL/DistriFS", - "url": "https://github.com/JIBSIL/DistriFS", - "rel": "/software/repository/github/JIBSIL/DistriFS", - "avatar": "https://avatars.githubusercontent.com/u/40243545?v=4", - "description": "Distributed, efficient and secure filesystem coded in Go", + "uid": "github/fakedrtom/oncogemini", + "url": "https://github.com/fakedrtom/oncogemini", + "rel": "/software/repository/github/fakedrtom/oncogemini", + "avatar": "https://avatars.githubusercontent.com/u/27868365?v=4", + "description": null, "topics": [] }, { - "uid": "github/LucIJspeert/star_shadow", - "url": "https://github.com/LucIJspeert/star_shadow", - "rel": "/software/repository/github/LucIJspeert/star_shadow", - "avatar": "https://avatars.githubusercontent.com/u/46969344?v=4", - "description": "Recipe to fully automatically analyse eclipsing binary light curves and find eccentricity and more", + "uid": "github/kidusasfaw/spatPomp", + "url": "https://github.com/kidusasfaw/spatPomp", + "rel": "/software/repository/github/kidusasfaw/spatPomp", + "avatar": "https://avatars.githubusercontent.com/u/875338?v=4", + "description": "R package for statistical inference of spatiotemporal partially observed Markov processes", "topics": [] }, { - "uid": "github/LucIJspeert/eclipsr", - "url": "https://github.com/LucIJspeert/eclipsr", - "rel": "/software/repository/github/LucIJspeert/eclipsr", - "avatar": "https://avatars.githubusercontent.com/u/46969344?v=4", - "description": "Recipe to fully automatically find individual eclipses in light curves, determine ephemerides and more", + "uid": "github/EC-Earth/ece2cmor3", + "url": "https://github.com/EC-Earth/ece2cmor3", + "rel": "/software/repository/github/EC-Earth/ece2cmor3", + "avatar": "https://avatars2.githubusercontent.com/u/39129421?v=4", + "description": "Post-processing and cmorization of ec-earth output", "topics": [] }, { - "uid": "github/pyro-ppl/numpyro", - "url": "https://github.com/pyro-ppl/numpyro", - "rel": "/software/repository/github/pyro-ppl/numpyro", - "avatar": "https://avatars.githubusercontent.com/u/46794900?v=4", - "description": "Probabilistic programming with NumPy powered by JAX for autograd and JIT compilation to GPU/TPU/CPU.", + "uid": "github/KennethEnevoldsen/augmenty", + "url": "https://github.com/KennethEnevoldsen/augmenty", + "rel": "/software/repository/github/KennethEnevoldsen/augmenty", + "avatar": "https://avatars.githubusercontent.com/u/23721977?v=4", + "description": "Augmenty is an augmentation library based on spaCy for augmenting texts.", "topics": [ - "pyro", - "jax", - "hmc", - "inference-algorithms", - "numpy", - "bayesian-inference", - "probabilistic-programming", - "mcmc" + "augmentation", + "spacy-extension", + "spacy", + "nlp", + "nlproc", + "natural-language-processing", + "python", + "text-classification", + "training-data", + "text-augmentation", + "spacy-nlp" ] }, { - "uid": "github/pyro-ppl/pyro", - "url": "https://github.com/pyro-ppl/pyro", - "rel": "/software/repository/github/pyro-ppl/pyro", - "avatar": "https://avatars.githubusercontent.com/u/46794900?v=4", - "description": "Deep universal probabilistic programming with Python and PyTorch", + "uid": "github/goharbor/harbor", + "url": "https://github.com/goharbor/harbor", + "rel": "/software/repository/github/goharbor/harbor", + "avatar": "https://avatars.githubusercontent.com/u/40275816?v=4", + "description": "An open source trusted cloud native registry project that stores, signs, and scans content.", "topics": [ - "python", - "pytorch", - "machine-learning", - "bayesian", - "probabilistic-programming", - "bayesian-inference", - "variational-inference", - "probabilistic-modeling", - "deep-learning" + "cncf", + "container", + "registry", + "helm", + "cloud-native", + "containers", + "docker", + "kubernetes", + "cncf-project", + "container-management", + "container-registry", + "hacktoberfest" ] }, { - "uid": "github/Multiscale-Genomics/VRE", - "url": "https://github.com/Multiscale-Genomics/VRE", - "rel": "/software/repository/github/Multiscale-Genomics/VRE", - "avatar": "https://avatars.githubusercontent.com/u/19903538?v=4", - "description": "MuG Virtual Research Environment", + "uid": "github/Qepanna/goFlux", + "url": "https://github.com/Qepanna/goFlux", + "rel": "/software/repository/github/Qepanna/goFlux", + "avatar": "https://avatars.githubusercontent.com/u/66706307?v=4", + "description": "goFlux: A user-friendly way to calculate GHG fluxes yourself, regardless of user experience", + "topics": [] + }, + { + "uid": "github/alexji/LESSPayne", + "url": "https://github.com/alexji/LESSPayne", + "rel": "/software/repository/github/alexji/LESSPayne", + "avatar": "https://avatars.githubusercontent.com/u/3082382?v=4", + "description": "Labeling Echelle Spectra with SMHR and Payne", + "topics": [] + }, + { + "uid": "github/theGreatHerrLebert/rustims", + "url": "https://github.com/theGreatHerrLebert/rustims", + "rel": "/software/repository/github/theGreatHerrLebert/rustims", + "avatar": "https://avatars.githubusercontent.com/u/32388991?v=4", + "description": "A Framework for IMS-MS Raw Data Processing written in Rust and Python.", "topics": [ - "php", - "vre" + "bottom-up", + "data-independent-acquisition", + "high-throughput", + "ion-mobility-spectrometry", + "omics", + "proteomics", + "pyo3", + "python", + "rust-lang", + "timstof", + "raw-data", + "mass-spectrometry" ] }, { - "uid": "github/micahvista/MAMnet", - "url": "https://github.com/micahvista/MAMnet", - "rel": "/software/repository/github/micahvista/MAMnet", - "avatar": "https://avatars.githubusercontent.com/u/38337171?v=4", - "description": "MAMnet uses a deep learning network to call genetic variants from third generation DNA sequencing data.", + "uid": "github/JuliaHEP/UnROOT.jl", + "url": "https://github.com/JuliaHEP/UnROOT.jl", + "rel": "/software/repository/github/JuliaHEP/UnROOT.jl", + "avatar": "https://avatars.githubusercontent.com/u/20717981?v=4", + "description": "Native Julia I/O package to work with CERN ROOT files", "topics": [ - "bioinformatics", - "genomics", - "structural-variation-calling", - "structural-variations", - "deep-learning", - "deep-neural-networks" + "cern-root", + "julia", + "analysis", + "bigdata", + "particle-physics", + "hep", + "hep-ex", + "high-energy-physics", + "hacktoberfest" ] }, { - "uid": "github/AKHughes1994/polkat", - "url": "https://github.com/AKHughes1994/polkat", - "rel": "/software/repository/github/AKHughes1994/polkat", - "avatar": "https://avatars.githubusercontent.com/u/49698839?v=4", - "description": "Repository of tools and scripts for short track (full polarisation) calibration and imaging with MeerKAT (and possibly other linear-feed interferometers). Devloped as a part of the X-KAT collaboration. ", + "uid": "github/feature-engine/feature_engine", + "url": "https://github.com/feature-engine/feature_engine", + "rel": "/software/repository/github/feature-engine/feature_engine", + "avatar": "https://avatars.githubusercontent.com/u/87381597?v=4", + "description": "Feature engineering package with sklearn like functionality", "topics": [] }, { - "uid": "github/villano-lab/nrCascadeSim", - "url": "https://github.com/villano-lab/nrCascadeSim", - "rel": "/software/repository/github/villano-lab/nrCascadeSim", - "avatar": "https://avatars.githubusercontent.com/u/52713476?v=4", - "description": "calculating the NR spectrum resulting from neutron-capture cascades.", + "uid": "github/sachsmc/cosinor", + "url": "https://github.com/sachsmc/cosinor", + "rel": "/software/repository/github/sachsmc/cosinor", + "avatar": "https://avatars2.githubusercontent.com/u/5464185?v=4", + "description": "R package for estimation and prediction of the cosinor model for periodic data", "topics": [] }, { - "uid": "github/nwchemgit/nwchem", - "url": "https://github.com/nwchemgit/nwchem", - "rel": "/software/repository/github/nwchemgit/nwchem", - "avatar": "https://avatars.githubusercontent.com/u/33767317?v=4", - "description": "NWChem: Open Source High-Performance Computational Chemistry", + "uid": "github/michaeltouati/ESVM", + "url": "https://github.com/michaeltouati/ESVM", + "rel": "/software/repository/github/michaeltouati/ESVM", + "avatar": "https://avatars.githubusercontent.com/u/14829604?v=4", + "description": "Finite-volume Vlasov-Maxwell code to study for Plasma Physics simulations", "topics": [ - "computational-chemistry", - "parallel-computing", - "electronic-structure-calculations", - "molecular-simulation", - "density-functional-theory", - "nwchem", - "chemistry", - "hartree-fock", - "quantum-chemistry" + "vlasov", + "maxwell", + "plasmas", + "landau-damping", + "electrostatic-wakefield", + "two-stream-instability", + "finite-volume" ] }, { - "uid": "github/Ge-Lab/USAT", - "url": "https://github.com/Ge-Lab/USAT", - "rel": "/software/repository/github/Ge-Lab/USAT", - "avatar": "https://avatars.githubusercontent.com/u/103397680?v=4", - "description": "USAT is a software for analyzing and visualizing the Tandem Repeat (TR) alleles", - "topics": [] - }, - { - "uid": "github/signaturescience/skater", - "url": "https://github.com/signaturescience/skater", - "rel": "/software/repository/github/signaturescience/skater", - "avatar": "https://avatars.githubusercontent.com/u/36040935?v=4", - "description": "SKATE R Utilities", + "uid": "github/lucaborsato/trades", + "url": "https://github.com/lucaborsato/trades", + "rel": "/software/repository/github/lucaborsato/trades", + "avatar": "https://avatars.githubusercontent.com/u/8124268?v=4", + "description": "Fortran90 code for the orbital simulation of exoplanetary system with simultaneous fit of Transit Times and Radial Velocities. ", "topics": [] }, { - "uid": "github/dixonlab/hic_breakfinder", - "url": "https://github.com/dixonlab/hic_breakfinder", - "rel": "/software/repository/github/dixonlab/hic_breakfinder", - "avatar": "https://avatars.githubusercontent.com/u/31485027?v=4", - "description": "a framework that integrates optical mapping, high-throughput chromosome conformation capture (Hi-C), and whole genome sequencing to systematically detect SVs in a variety of normal or cancer samples and cell lines.", + "uid": "github/henry2004y/Vlasiator.jl", + "url": "https://github.com/henry2004y/Vlasiator.jl", + "rel": "/software/repository/github/henry2004y/Vlasiator.jl", + "avatar": "https://avatars.githubusercontent.com/u/20110816?v=4", + "description": "Data processor for Vlasiator", "topics": [] }, { - "uid": "github/bancaditalia/black-it", - "url": "https://github.com/bancaditalia/black-it", - "rel": "/software/repository/github/bancaditalia/black-it", - "avatar": "https://avatars.githubusercontent.com/u/14347148?v=4", - "description": "Black-box abm calibration kit by the Bank of Italy", + "uid": "github/blind-contours/CVtreeMLE", + "url": "https://github.com/blind-contours/CVtreeMLE", + "rel": "/software/repository/github/blind-contours/CVtreeMLE", + "avatar": "https://avatars.githubusercontent.com/u/54640903?v=4", + "description": ":deciduous_tree: :dart: Cross Validated Decision Trees with Targeted Maximum Likelihood Estimation", "topics": [ - "agent-based-modeling", - "calibration-toolbox" + "machine-learning", + "targeted-learning", + "statistics", + "variable-importance", + "causal-inference", + "decision-trees", + "robust-statistics", + "causal-effects", + "exposure-mixtures" ] }, { - "uid": "github/wangbingjie/sbi_pp", - "url": "https://github.com/wangbingjie/sbi_pp", - "rel": "/software/repository/github/wangbingjie/sbi_pp", - "avatar": "https://avatars.githubusercontent.com/u/12805735?v=4", - "description": "Simulation-based (likelihood-free) inference customized for astronomical applications", + "uid": "github/blind-contours/SuperNOVA", + "url": "https://github.com/blind-contours/SuperNOVA", + "rel": "/software/repository/github/blind-contours/SuperNOVA", + "avatar": "https://avatars.githubusercontent.com/u/54640903?v=4", + "description": ":dizzy: :dart: Automatic identification of variable and interaction importance using basis functions and non-parametric estimation of interactions/effect modification using joint stochastic interventions.", "topics": [ - "sed-fitting", - "simulation-based-inference" + "machine-learning", + "variable-importance", + "interactions", + "targeted-learning", + "statistics", + "mixed-exposure" ] }, { - "uid": "github/candebellavita/vkompth", - "url": "https://github.com/candebellavita/vkompth", - "rel": "/software/repository/github/candebellavita/vkompth", - "avatar": "https://avatars.githubusercontent.com/u/79205399?v=4", - "description": null, + "uid": "github/JeffLCoughlin/skye", + "url": "https://github.com/JeffLCoughlin/skye", + "rel": "/software/repository/github/JeffLCoughlin/skye", + "avatar": "https://avatars.githubusercontent.com/u/11861045?v=4", + "description": "The Kepler DR25 Skye Test", "topics": [] }, { - "uid": "github/rodluger/Limbdark.jl", - "url": "https://github.com/rodluger/Limbdark.jl", - "rel": "/software/repository/github/rodluger/Limbdark.jl", - "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", - "description": "Analytical transit light curves for limb darkened stars", + "uid": "github/JeffLCoughlin/EphemMatch", + "url": "https://github.com/JeffLCoughlin/EphemMatch", + "rel": "/software/repository/github/JeffLCoughlin/EphemMatch", + "avatar": "https://avatars.githubusercontent.com/u/11861045?v=4", + "description": "Code to do ephemeris matching of DR25 TCEs, KOIs, and EBs for false positive identificaiton.", "topics": [] }, { - "uid": "github/rodluger/planetplanet", - "url": "https://github.com/rodluger/planetplanet", - "rel": "/software/repository/github/rodluger/planetplanet", - "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", - "description": "A general photodynamical code for exoplanet light curves", + "uid": "github/cheginit/HyRiver", + "url": "https://github.com/cheginit/HyRiver", + "rel": "/software/repository/github/cheginit/HyRiver", + "avatar": "https://avatars.githubusercontent.com/u/13016644?v=4", + "description": "A Python software stack for retrieving hydroclimate data from web services.", "topics": [ - "exoplanets", - "exoplanet-transits", - "light-curves", - "binary-stars", - "exomoons" + "python", + "webservice", + "hydrology", + "climate", + "data" ] }, { - "uid": "github/rodluger/everest", - "url": "https://github.com/rodluger/everest", - "rel": "/software/repository/github/rodluger/everest", - "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", - "description": "De-trending of K2 Light curves", - "topics": [ - "exoplanets", - "photometry", - "kepler", - "k2-light-curves", - "k2-data-science", - "exoplanet-transits" - ] + "uid": "github/YeoLab/clipper", + "url": "https://github.com/YeoLab/clipper", + "rel": "/software/repository/github/YeoLab/clipper", + "avatar": "https://avatars.githubusercontent.com/u/2112324?v=4", + "description": "A tool to detect CLIP-seq peaks.", + "topics": [] }, { - "uid": "github/rodluger/starry_process", - "url": "https://github.com/rodluger/starry_process", - "rel": "/software/repository/github/rodluger/starry_process", - "avatar": "https://avatars.githubusercontent.com/u/9323819?v=4", - "description": "interpretable gaussian processes for stellar light curves", - "topics": [ - "gaussian-processes", - "lightcurves", - "timeseries-analysis", - "stars" - ] + "uid": "github/YeoLab/FLARE", + "url": "https://github.com/YeoLab/FLARE", + "rel": "/software/repository/github/YeoLab/FLARE", + "avatar": "https://avatars.githubusercontent.com/u/2112324?v=4", + "description": "RNA edit detection (SAILOR) and peak calling (FLARE)", + "topics": [] }, { - "uid": "github/wf4ever/astrotaverna", - "url": "https://github.com/wf4ever/astrotaverna", - "rel": "/software/repository/github/wf4ever/astrotaverna", - "avatar": "https://avatars.githubusercontent.com/u/557448?v=4", - "description": "Astronomy plugins for Taverna Workbench", + "uid": "github/CadenArmstrong/simuTrans", + "url": "https://github.com/CadenArmstrong/simuTrans", + "rel": "/software/repository/github/CadenArmstrong/simuTrans", + "avatar": "https://avatars.githubusercontent.com/u/3118402?v=4", + "description": "Exoplanet transit simulator.", "topics": [] }, { - "uid": "github/gperezs/StarcNet", - "url": "https://github.com/gperezs/StarcNet", - "rel": "/software/repository/github/gperezs/StarcNet", - "avatar": "https://avatars.githubusercontent.com/u/16939029?v=4", - "description": "Machine learning for star cluster classification", + "uid": "github/Hoeijmakers/tayph", + "url": "https://github.com/Hoeijmakers/tayph", + "rel": "/software/repository/github/Hoeijmakers/tayph", + "avatar": "https://avatars.githubusercontent.com/u/57099343?v=4", + "description": "Analysis of high resolution spectroscopic time-series of exoplanets", "topics": [] }, { - "uid": "github/nmfs-fish-tools/ssmse", - "url": "https://github.com/nmfs-fish-tools/SSMSE", - "rel": "/software/repository/github/nmfs-fish-tools/ssmse", - "avatar": "https://avatars.githubusercontent.com/u/49072821?v=4", - "description": "Management Strategy Evaluation (MSE) using Stock Synthesis (SS3)", - "topics": [ - "stock-synthesis" - ] + "uid": "github/r-cas/caracas", + "url": "https://github.com/r-cas/caracas", + "rel": "/software/repository/github/r-cas/caracas", + "avatar": "https://avatars.githubusercontent.com/u/58435783?v=4", + "description": "Computer algebra in R", + "topics": [] }, { - "uid": "github/theia-dev/Qiber3D", - "url": "https://github.com/theia-dev/Qiber3D", - "rel": "/software/repository/github/theia-dev/Qiber3D", - "avatar": "https://avatars.githubusercontent.com/u/53050231?v=4", - "description": "Automated quantification of fibrous networks", + "uid": "github/ot483/NetCom", + "url": "https://github.com/ot483/NetCom", + "rel": "/software/repository/github/ot483/NetCom", + "avatar": "https://avatars.githubusercontent.com/u/78791373?v=4", + "description": null, "topics": [] }, { - "uid": "github/UtrechtUniversity/raster_extraction", - "url": "https://github.com/UtrechtUniversity/raster_extraction", - "rel": "/software/repository/github/UtrechtUniversity/raster_extraction", - "avatar": "https://avatars.githubusercontent.com/u/11516575?v=4", + "uid": "github/agusinac/OmicFlow", + "url": "https://github.com/agusinac/OmicFlow", + "rel": "/software/repository/github/agusinac/OmicFlow", + "avatar": "https://avatars.githubusercontent.com/u/93720822?v=4", "description": null, "topics": [] }, { - "uid": "github/IFB-ElixirFr/edam-browser", - "url": "https://github.com/IFB-ElixirFr/edam-browser", - "rel": "/software/repository/github/IFB-ElixirFr/edam-browser", - "avatar": "https://avatars3.githubusercontent.com/u/24292199?v=4", - "description": "Stand alone js browser for EDAM Ontology", + "uid": "github/lisadang27/SPCA", + "url": "https://github.com/lisadang27/SPCA", + "rel": "/software/repository/github/lisadang27/SPCA", + "avatar": "https://avatars.githubusercontent.com/u/17075772?v=4", + "description": "Spitzer Phase Curve Analysis", "topics": [] }, { - "uid": "github/ddarriba/prottest3", - "url": "https://github.com/ddarriba/prottest3", - "rel": "/software/repository/github/ddarriba/prottest3", - "avatar": "https://avatars.githubusercontent.com/u/3135601?v=4", - "description": "Automatically exported from code.google.com/p/prottest3", + "uid": "github/benvanwerkhoven/kernel_tuner", + "url": "https://github.com/benvanwerkhoven/kernel_tuner", + "rel": "/software/repository/github/benvanwerkhoven/kernel_tuner", + "avatar": "https://avatars0.githubusercontent.com/u/2337546?v=4", + "description": "Kernel Tuner", + "topics": [ + "opencl-kernels", + "kernel-tuner", + "cuda-kernels", + "python", + "gpu", + "cuda", + "opencl", + "c", + "cplusplus", + "autotuning", + "auto-tuning", + "gpu-computing", + "testing", + "software-development", + "optimization", + "machine-learning" + ] + }, + { + "uid": "github/sonwell/biotools", + "url": "https://github.com/sonwell/biotools", + "rel": "/software/repository/github/sonwell/biotools", + "avatar": "https://avatars.githubusercontent.com/u/243377?v=4", + "description": "A bunch of bioinformatics tools.", + "topics": [] + }, + { + "uid": "github/astropatel/twinkle", + "url": "https://github.com/astropatel/twinkle", + "rel": "/software/repository/github/astropatel/twinkle", + "avatar": "https://avatars.githubusercontent.com/u/3648312?v=4", + "description": "Calculate and plot spectral energy distribution of main-sequence stars with additional option of blackbody/greybody calculation from mid-IR excess", "topics": [] }, { - "uid": "github/ejhigson/dyPolyChord", - "url": "https://github.com/ejhigson/dyPolyChord", - "rel": "/software/repository/github/ejhigson/dyPolyChord", - "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", - "description": "Super fast dynamic nested sampling with PolyChord (Python, C++ and Fortran likelihoods).", + "uid": "github/sing-group/my-brain-seq", + "url": "https://github.com/sing-group/my-brain-seq", + "rel": "/software/repository/github/sing-group/my-brain-seq", + "avatar": "https://avatars.githubusercontent.com/u/12700493?v=4", + "description": "myBrain-Seq: a Compi pipeline for miRNA-Seq data analysis in neuropsychiatry", "topics": [ - "nested-sampling", - "dynamic-nested-sampling" + "differential-expression", + "docker", + "mirna", + "mirna-seq", + "compi", + "pipeline" ] }, { - "uid": "github/ejhigson/perfectns", - "url": "https://github.com/ejhigson/perfectns", - "rel": "/software/repository/github/ejhigson/perfectns", - "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", - "description": "\"Perfect\" dynamic and standard nested sampling for spherically symmetric likelihoods and priors.", + "uid": "github/sing-group/seda", + "url": "https://github.com/sing-group/seda", + "rel": "/software/repository/github/sing-group/seda", + "avatar": "https://avatars.githubusercontent.com/u/12700493?v=4", + "description": "SEquence DAtaset builder", "topics": [ - "nested-sampling", - "dynamic-nested-sampling", - "pure-python", - "bayesian-inference" + "sequences", + "fasta", + "fasta-sequences", + "bioinformatics", + "java", + "sequence-dataset-builder" ] }, { - "uid": "github/ejhigson/nestcheck", - "url": "https://github.com/ejhigson/nestcheck", - "rel": "/software/repository/github/ejhigson/nestcheck", - "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", - "description": "Error analysis, diagnostic tests and plots for nested sampling calculations.", + "uid": "github/ethicsai/ethical-smart-grid", + "url": "https://github.com/ethicsai/ethical-smart-grid", + "rel": "/software/repository/github/ethicsai/ethical-smart-grid", + "avatar": "https://avatars.githubusercontent.com/u/113445198?v=4", + "description": "Reinforcement learning environment for learning ethical behaviours in a SmartGrid use-case.", "topics": [ - "nested-sampling", - "dynamic-nested-sampling", - "bayesian-inference", - "error-analysis", - "sampling-error", - "python" + "ai-ethics", + "artificial-intelligence", + "gym-environment", + "machine-ethics", + "python", + "reinforcement-learning", + "smart-grid" ] }, { - "uid": "github/RafiKueng/SpaghettiLens", - "url": "https://github.com/RafiKueng/SpaghettiLens", - "rel": "/software/repository/github/RafiKueng/SpaghettiLens", - "avatar": "https://avatars.githubusercontent.com/u/937466?v=4", - "description": "Webbased Gravitational Lens Modelling Tool (client and server side)", - "topics": [] - }, - { - "uid": "github/undark-lab/albatross", - "url": "https://github.com/undark-lab/albatross", - "rel": "/software/repository/github/undark-lab/albatross", - "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", - "description": "A simulation-based Inference (SBI) library designed to perform analysis on stellar streams in the Milky Way", + "uid": "github/nedRad88/SCALAR", + "url": "https://github.com/nedRad88/SCALAR", + "rel": "/software/repository/github/nedRad88/SCALAR", + "avatar": "https://avatars0.githubusercontent.com/u/12820298?v=4", + "description": "SCALAR - Streaming ChALlenge plAtfoRm", "topics": [] }, { - "uid": "github/undark-lab/swyft", - "url": "https://github.com/undark-lab/swyft", - "rel": "/software/repository/github/undark-lab/swyft", - "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", - "description": "Truncated marginal neural ratio estimation estimation with PyTorch.", + "uid": "github/CaNS-World/CaNS-Fizzy", + "url": "https://github.com/CaNS-World/CaNS-Fizzy", + "rel": "/software/repository/github/CaNS-World/CaNS-Fizzy", + "avatar": "https://avatars.githubusercontent.com/u/111527101?v=4", + "description": "A code for fast, massively-parallel simulations of two-phase flows with heat transfer", "topics": [ - "pytorch", - "python", - "simulation-based", - "inference" + "direct-numerical-simulation", + "fortran", + "gpu", + "high-performance-computing", + "multiphase-flow", + "turbulence", + "computational-fluid-dynamics", + "fluid-dynamics", + "fluid-simulation" ] }, { - "uid": "github/undark-lab/sstrax", - "url": "https://github.com/undark-lab/sstrax", - "rel": "/software/repository/github/undark-lab/sstrax", - "avatar": "https://avatars.githubusercontent.com/u/75046902?v=4", - "description": "A jax-accelerated modelling code for Milky Way stellar streams", - "topics": [] - }, - { - "uid": "github/a-renzini/pygwb", - "url": "https://github.com/a-renzini/pygwb", - "rel": "/software/repository/github/a-renzini/pygwb", - "avatar": "https://avatars.githubusercontent.com/u/26894726?v=4", + "uid": "github/KTH-Nek5000/UQit", + "url": "https://github.com/KTH-Nek5000/UQit", + "rel": "/software/repository/github/KTH-Nek5000/UQit", + "avatar": "https://avatars.githubusercontent.com/u/17083799?v=4", "description": null, "topics": [] }, { - "uid": "github/taranu/AllStarFit", - "url": "https://github.com/taranu/AllStarFit", - "rel": "/software/repository/github/taranu/AllStarFit", - "avatar": "https://avatars.githubusercontent.com/u/10129954?v=4", - "description": "Experimental R package for source detection, PSF and multi-component galaxy fitting", + "uid": "github/MP-Gadget/bigfile", + "url": "https://github.com/MP-Gadget/bigfile", + "rel": "/software/repository/github/MP-Gadget/bigfile", + "avatar": "https://avatars.githubusercontent.com/u/38799051?v=4", + "description": "A reproducible massively parallel IO library for hierarchical data", "topics": [] }, { - "uid": "github/wangsiwei2010/FPMVS-CAG", - "url": "https://github.com/wangsiwei2010/FPMVS-CAG", - "rel": "/software/repository/github/wangsiwei2010/FPMVS-CAG", - "avatar": "https://avatars.githubusercontent.com/u/16240342?v=4", - "description": "code of \"Fast Parameter-free Multi-view Subspace Clustering with Consensus Anchor Guidance \" published in IEEE TIP2022", + "uid": "github/aschafu/PSSH2", + "url": "https://github.com/aschafu/PSSH2", + "rel": "/software/repository/github/aschafu/PSSH2", + "avatar": "https://avatars.githubusercontent.com/u/2921478?v=4", + "description": "Scripts for generating pssh2", "topics": [] }, { - "uid": "github/ucsbdeepspace/tripp_pipeline", - "url": "https://github.com/ucsbdeepspace/tripp_pipeline", - "rel": "/software/repository/github/ucsbdeepspace/tripp_pipeline", - "avatar": "https://avatars.githubusercontent.com/u/5273399?v=4", - "description": "TRIPP", + "uid": "github/cblakeastro/intensitypower", + "url": "https://github.com/cblakeastro/intensitypower", + "rel": "/software/repository/github/cblakeastro/intensitypower", + "avatar": "https://avatars.githubusercontent.com/u/34926798?v=4", + "description": null, "topics": [] }, { - "uid": "github/TRACER-LULab/Hyperelastics.jl", - "url": "https://github.com/TRACER-LULab/Hyperelastics.jl", - "rel": "/software/repository/github/TRACER-LULab/Hyperelastics.jl", - "avatar": "https://avatars.githubusercontent.com/u/75383514?v=4", - "description": "Hyperelastic Material modelling with support for Automatic Differentiation", + "uid": "github/akdeniz-uzay/A-Track", + "url": "https://github.com/akdeniz-uzay/A-Track", + "rel": "/software/repository/github/akdeniz-uzay/A-Track", + "avatar": "https://avatars.githubusercontent.com/u/10726366?v=4", + "description": "A-Track: Detecting Moving Objects in FITS images.", "topics": [ - "finite-element-methods", - "hyperelasticity", - "material-model" + "astronomy", + "asteroids", + "image-processing" ] }, { - "uid": "github/clauswilke/PeptideBuilder", - "url": "https://github.com/clauswilke/PeptideBuilder", - "rel": "/software/repository/github/clauswilke/PeptideBuilder", - "avatar": "https://avatars.githubusercontent.com/u/4210929?v=4", - "description": "A simple Python library to generate model peptides", + "uid": "github/dawolfgang/MRrelation", + "url": "https://github.com/dawolfgang/MRrelation", + "rel": "/software/repository/github/dawolfgang/MRrelation", + "avatar": "https://avatars.githubusercontent.com/u/7773526?v=4", + "description": null, "topics": [] }, { - "uid": "github/wullm/fastdf", - "url": "https://github.com/wullm/fastdf", - "rel": "/software/repository/github/wullm/fastdf", - "avatar": "https://avatars.githubusercontent.com/u/13404568?v=4", - "description": "Integrate neutrino geodesics in linear theory.", + "uid": "github/underworldcode/underworld3", + "url": "https://github.com/underworldcode/underworld3", + "rel": "/software/repository/github/underworldcode/underworld3", + "avatar": "https://avatars.githubusercontent.com/u/14074661?v=4", + "description": "Underworld v3", "topics": [] }, { - "uid": "github/wullm/zwindstroom", - "url": "https://github.com/wullm/zwindstroom", - "rel": "/software/repository/github/wullm/zwindstroom", - "avatar": "https://avatars.githubusercontent.com/u/13404568?v=4", - "description": "Library for cosmic neutrino calculations", - "topics": [] + "uid": "github/JuliaHCI/ADI.jl", + "url": "https://github.com/JuliaHCI/ADI.jl", + "rel": "/software/repository/github/JuliaHCI/ADI.jl", + "avatar": "https://avatars1.githubusercontent.com/u/62594833?v=4", + "description": "Algorithms for performing angular differential imaging (ADI)", + "topics": [ + "astronomy", + "hci", + "imaging", + "reduction", + "adi" + ] }, { - "uid": "github/PDB-REDO/cif-tools", - "url": "https://github.com/PDB-REDO/cif-tools", - "rel": "/software/repository/github/PDB-REDO/cif-tools", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "A suite of programs to manipulate and examine mmCIF files", + "uid": "github/FoxFortino/ABC-SN", + "url": "https://github.com/FoxFortino/ABC-SN", + "rel": "/software/repository/github/FoxFortino/ABC-SN", + "avatar": "https://avatars.githubusercontent.com/u/29548930?v=4", + "description": "The Attention Based Classifier for Supernovae (ABC-SN) is a neural network, inspired by the Transformer, to classify supernova into subtypes based on their spectra.", "topics": [] }, { - "uid": "github/PDB-REDO/libcifpp", - "url": "https://github.com/PDB-REDO/libcifpp", - "rel": "/software/repository/github/PDB-REDO/libcifpp", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "Library containing code to manipulate mmCIF and PDB files", + "uid": "github/p-sira/ellip", + "url": "https://github.com/p-sira/ellip", + "rel": "/software/repository/github/p-sira/ellip", + "avatar": "https://avatars.githubusercontent.com/u/186296676?v=4", + "description": "Elliptic integrals for Rust", "topics": [ - "mmcif", - "pdb-files", - "protein-structure" + "elliptic-integrals", + "math", + "rust", + "special-functions" ] }, { - "uid": "github/PDB-REDO/libpdb-redo", - "url": "https://github.com/PDB-REDO/libpdb-redo", - "rel": "/software/repository/github/PDB-REDO/libpdb-redo", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "Library containing shared code for various PDB-REDO programs", + "uid": "github/radifar/PyPLIF-HIPPOS", + "url": "https://github.com/radifar/PyPLIF-HIPPOS", + "rel": "/software/repository/github/radifar/PyPLIF-HIPPOS", + "avatar": "https://avatars.githubusercontent.com/u/11450417?v=4", + "description": "HIPPOS Is PyPLIF On Steroids. A Molecular Interaction Fingerprinting Tool for Docking Results of Autodock Vina and PLANTS", + "topics": [ + "molecular-docking", + "autodock-vina", + "interaction-fingerprinting", + "virtual-screening", + "drug-discovery" + ] + }, + { + "uid": "github/agorajs/agora-vpsc", + "url": "https://github.com/agorajs/agora-vpsc", + "rel": "/software/repository/github/agorajs/agora-vpsc", + "avatar": "https://avatars.githubusercontent.com/u/55066786?v=4", + "description": "VPSC adapter for agora-framework", "topics": [] }, { - "uid": "github/PDB-REDO/density-fitness", - "url": "https://github.com/PDB-REDO/density-fitness", - "rel": "/software/repository/github/PDB-REDO/density-fitness", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "Application to calculate the density statistics (RSR, SRSR, RSCCS, EDIAm and OPIA) for x-ray structures", + "uid": "github/agorajs/agora-forbid", + "url": "https://github.com/agorajs/agora-forbid", + "rel": "/software/repository/github/agorajs/agora-forbid", + "avatar": "https://avatars.githubusercontent.com/u/55066786?v=4", + "description": null, "topics": [] }, { - "uid": "github/PDB-REDO/tortoize", - "url": "https://github.com/PDB-REDO/tortoize", - "rel": "/software/repository/github/PDB-REDO/tortoize", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "Application to calculate ramachandran z-scores", + "uid": "github/neuralhydrology/neuralhydrology", + "url": "https://github.com/neuralhydrology/neuralhydrology", + "rel": "/software/repository/github/neuralhydrology/neuralhydrology", + "avatar": "https://avatars.githubusercontent.com/u/59032226?v=4", + "description": "Python library to train neural networks with a strong focus on hydrological applications.", "topics": [] }, { - "uid": "github/PDB-REDO/dssp", - "url": "https://github.com/PDB-REDO/dssp", - "rel": "/software/repository/github/PDB-REDO/dssp", - "avatar": "https://avatars.githubusercontent.com/u/71706409?v=4", - "description": "Application to assign secondary structure to proteins", + "uid": "github/r-spatial/rgee", + "url": "https://github.com/r-spatial/rgee", + "rel": "/software/repository/github/r-spatial/rgee", + "avatar": "https://avatars3.githubusercontent.com/u/25086656?v=4", + "description": "Google Earth Engine for R", "topics": [ - "dssp", - "pdb", - "proteins" + "earth-engine", + "googleearthengine", + "google-earth-engine", + "r", + "spatial-data", + "spatial-analysis", + "earthengine" ] }, { - "uid": "github/OP2/PyOP2", - "url": "https://github.com/OP2/PyOP2", - "rel": "/software/repository/github/OP2/PyOP2", - "avatar": "https://avatars.githubusercontent.com/u/1544411?v=4", - "description": "Framework for performance-portable parallel computations on unstructured meshes", + "uid": "github/HeracleBT/vEMstitch", + "url": "https://github.com/HeracleBT/vEMstitch", + "rel": "/software/repository/github/HeracleBT/vEMstitch", + "avatar": "https://avatars.githubusercontent.com/u/27627517?v=4", + "description": null, "topics": [] }, { - "uid": "github/NLeSC-GO-common-infrastructure/marzipan", - "url": "https://github.com/NLeSC-GO-common-infrastructure/marzipan", - "rel": "/software/repository/github/NLeSC-GO-common-infrastructure/marzipan", - "avatar": "https://avatars.githubusercontent.com/u/71445287?v=4", - "description": "Automated OpenNebula instantiation and provisioning (e.g SURF HPC)", + "uid": "github/RuthAngus/gprotation", + "url": "https://github.com/RuthAngus/GProtation", + "rel": "/software/repository/github/RuthAngus/gprotation", + "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", + "description": "Measuring stellar rotation periods with Gaussian processes", "topics": [] }, { - "uid": "github/JunTaoLuo/mctreesearch4j", - "url": "https://github.com/aqtech-ca/mctreesearch4j", - "rel": "/software/repository/github/JunTaoLuo/mctreesearch4j", - "avatar": "https://avatars.githubusercontent.com/u/92262712?v=4", - "description": null, + "uid": "github/RuthAngus/SIPK2", + "url": "https://github.com/RuthAngus/SIPK2", + "rel": "/software/repository/github/RuthAngus/SIPK2", + "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", + "description": "Systematics-Insensitive Periodograms for K2", "topics": [] }, { - "uid": "github/InsightSoftwareConsortium/ITK", - "url": "https://github.com/InsightSoftwareConsortium/ITK", - "rel": "/software/repository/github/InsightSoftwareConsortium/ITK", - "avatar": "https://avatars2.githubusercontent.com/u/319479?v=4", - "description": "Insight Toolkit (ITK) -- Official Repository", + "uid": "github/RuthAngus/stardate", + "url": "https://github.com/RuthAngus/stardate", + "rel": "/software/repository/github/RuthAngus/stardate", + "avatar": "https://avatars.githubusercontent.com/u/2834161?v=4", + "description": "Combining dating methods for better stellar ages", "topics": [ - "itk", - "insight-toolkit", - "image-analysis", - "medical-imaging", - "scientific-computing", - "open-science", - "open-source", - "reproducible-research", - "numfocus", - "cpp", - "python" + "stars", + "ages", + "stellar", + "isochrones", + "stellar-ages", + "isochrone-fitting", + "gyrochronology", + "age-rotation-relations", + "rotation", + "stellar-rotation", + "stellar-parameters", + "field-stars", + "bayesian", + "astronomy", + "astrophysics", + "mcmc", + "hierarchical", + "inference" ] }, { - "uid": "github/akleroy/phangs_imaging_scripts", - "url": "https://github.com/akleroy/phangs_imaging_scripts", - "rel": "/software/repository/github/akleroy/phangs_imaging_scripts", - "avatar": "https://avatars.githubusercontent.com/u/774248?v=4", - "description": "CASA+python imaging and product creation scripts for PHANGS-ALMA", + "uid": "github/thiago-glissoi/FFF-Line-Segmentation", + "url": "https://github.com/thiago-glissoi/FFF-Line-Segmentation", + "rel": "/software/repository/github/thiago-glissoi/FFF-Line-Segmentation", + "avatar": "https://avatars.githubusercontent.com/u/127967382?v=4", + "description": "The fff_segmenter algorithm is used to segment an acoustic signal obtained from a first layer 3D print into multiple acoustic blocks related to specific geometrical elements of the printed part, such as contour lines, raster lines, and transition between raster lines.", "topics": [] }, { - "uid": "github/SterlingYM/astroPIPS", - "url": "https://github.com/SterlingYM/astroPIPS", - "rel": "/software/repository/github/SterlingYM/astroPIPS", - "avatar": "https://avatars.githubusercontent.com/u/45109159?v=4", - "description": "A set of tools for photometric analysis. Determines the period of short-period variable stars.", - "topics": [ - "python", - "jupyter-notebook", - "astronomy", - "variable-stars", - "pipelines" - ] + "uid": "github/angelmons/landlab", + "url": "https://github.com/angelmons/landlab", + "rel": "/software/repository/github/angelmons/landlab", + "avatar": "https://avatars.githubusercontent.com/u/96837810?v=4", + "description": "Landlab codebase, wiki, and tests", + "topics": [] }, { - "uid": "github/moeyensj/atm", - "url": "https://github.com/moeyensj/atm", - "rel": "/software/repository/github/moeyensj/atm", - "avatar": "https://avatars.githubusercontent.com/u/4206654?v=4", - "description": "Asteroid Thermal Modeling", - "topics": [ - "python", - "asteroids", - "astronomy", - "solar-system", - "mcmc", - "pymc3", - "minor-planets", - "open-source-project" - ] + "uid": "github/interactivereport/OmicsView0", + "url": "https://github.com/interactivereport/OmicsView0", + "rel": "/software/repository/github/interactivereport/OmicsView0", + "avatar": "https://avatars.githubusercontent.com/u/29576524?v=4", + "description": null, + "topics": [] }, { - "uid": "github/SDXorg/pysd", - "url": "https://github.com/SDXorg/pysd", - "rel": "/software/repository/github/SDXorg/pysd", - "avatar": "https://avatars.githubusercontent.com/u/11491926?v=4", - "description": "System Dynamics Modeling in Python", + "uid": "github/interactivereport/scRNASequest", + "url": "https://github.com/interactivereport/scRNAsequest", + "rel": "/software/repository/github/interactivereport/scRNASequest", + "avatar": "https://avatars.githubusercontent.com/u/29576524?v=4", + "description": "scRNASequest: an ecosystem of scRNA-seq analysis, visualization and publishing", "topics": [] }, { - "uid": "github/adrientaudiere/MiscMetabar", - "url": "https://github.com/adrientaudiere/MiscMetabar", - "rel": "/software/repository/github/adrientaudiere/MiscMetabar", - "avatar": "https://avatars.githubusercontent.com/u/6680165?v=4", - "description": "R package MiscMetabar: Miscellaneous functions for metabarcoding analysis", + "uid": "github/benhid/Sequoya", + "url": "https://github.com/benhid/Sequoya", + "rel": "/software/repository/github/benhid/Sequoya", + "avatar": "https://avatars.githubusercontent.com/u/6999898?v=4", + "description": "Solving Multiple Sequence Alignment (MSA) problems with multi-objective metaheuristics", "topics": [ - "ecology", - "metabarcoding", - "ngs-analysis", - "package", - "r" + "metaheuristics", + "optimization", + "sequence-alignments", + "msa", + "multiple-sequence-alignment", + "python" ] }, { - "uid": "github/solids4foam/solids4foam", - "url": "https://github.com/solids4foam/solids4foam", - "rel": "/software/repository/github/solids4foam/solids4foam", - "avatar": "https://avatars.githubusercontent.com/u/110133789?v=4", - "description": "The official repository for solids4foam", + "uid": "github/raredd/kmdata", + "url": "https://github.com/raredd/kmdata", + "rel": "/software/repository/github/raredd/kmdata", + "avatar": "https://avatars.githubusercontent.com/u/6332718?v=4", + "description": "kmdata: A Database of Reconstructed Individual Patient Level Data from 153 Oncology Clinical trials", "topics": [] }, { - "uid": "github/pmvreeswijk/ZOGY", - "url": "https://github.com/pmvreeswijk/ZOGY", - "rel": "/software/repository/github/pmvreeswijk/ZOGY", - "avatar": "https://avatars.githubusercontent.com/u/19797964?v=4", - "description": "a Python implementation of proper image subtraction (Zackay, Ofek & Gal-Yam 2016, ApJ, 830, 27)", - "topics": [] + "uid": "github/Smith42/XDF-GAN", + "url": "https://github.com/Smith42/XDF-GAN", + "rel": "/software/repository/github/Smith42/XDF-GAN", + "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", + "description": "A GAN for the generation of mock astronomical surveys", + "topics": [ + "gan", + "astronomy", + "machine-learning", + "deep-learning" + ] }, { - "uid": "github/pmvreeswijk/BlackBOX", - "url": "https://github.com/pmvreeswijk/BlackBOX", - "rel": "/software/repository/github/pmvreeswijk/BlackBOX", - "avatar": "https://avatars.githubusercontent.com/u/19797964?v=4", - "description": "image processing sofware specifically for the reduction of BlackGEM and MeerLICHT images", - "topics": [] + "uid": "github/Smith42/astroPT", + "url": "https://github.com/Smith42/astroPT", + "rel": "/software/repository/github/Smith42/astroPT", + "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", + "description": "Transformer for galaxy images (and general astronomy)", + "topics": [ + "astronomy", + "transformer", + "large-observation-model" + ] }, { - "uid": "github/DavidRConnell/matlab-igraph", - "url": "https://github.com/DavidRConnell/matlab-igraph", - "rel": "/software/repository/github/DavidRConnell/matlab-igraph", - "avatar": "https://avatars.githubusercontent.com/u/35470740?v=4", - "description": "Igraph bindings for matlab", + "uid": "github/Smith42/astroddpm", + "url": "https://github.com/Smith42/astroddpm", + "rel": "/software/repository/github/Smith42/astroddpm", + "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", + "description": "A denoising diffusion probabilistic model synthesises galaxies that are qualitatively and physically indistinguishable from the real thing.", "topics": [ - "graph", - "graph-algorithms", - "matlab", - "network-analysis" + "machine-learning", + "astronomy", + "galaxies" ] }, { - "uid": "github/aritraghsh09/GaMorNet", - "url": "https://github.com/aritraghsh09/GaMorNet", - "rel": "/software/repository/github/aritraghsh09/GaMorNet", - "avatar": "https://avatars.githubusercontent.com/u/6251857?v=4", - "description": "GaMorNet is a CNN based on AlexNet to classify galaxies morphologically", + "uid": "github/Smith42/pix2prof", + "url": "https://github.com/Smith42/pix2prof", + "rel": "/software/repository/github/Smith42/pix2prof", + "avatar": "https://avatars.githubusercontent.com/u/8194280?v=4", + "description": "Pix2Prof: extracting sequential galaxy data with a language model", "topics": [ - "astrophysics", - "astronomy", "galaxies", - "convolutional-neural-networks", - "tflearn", - "tensorflow", - "morphological-analysis", "machine-learning", - "neural-networks", - "sdss", - "candels" + "astronomy", + "natural-language-processing" ] }, { - "uid": "github/aritraghsh09/GaMPEN", - "url": "https://github.com/aritraghsh09/GaMPEN", - "rel": "/software/repository/github/aritraghsh09/GaMPEN", - "avatar": "https://avatars.githubusercontent.com/u/6251857?v=4", - "description": "ML framework to estimate Bayesian posteriors of galaxy morphological parameters", + "uid": "github/smsharma/dark-photons-perturbations", + "url": "https://github.com/smsharma/dark-photons-perturbations", + "rel": "/software/repository/github/smsharma/dark-photons-perturbations", + "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", + "description": "Dark photon conversions in our inhomogeneous Universe. Code repository associated with the papers https://arxiv.org/abs/2002.05165 and https://arxiv.org/abs/2004.06733.", "topics": [ - "astrophysics", - "deep-neural-networks", - "galaxy-morphology", - "pytorch", - "spatial-transformer-networks", - "uncertainty-neural-networks" + "dark-photons", + "dark-matter", + "perturbations", + "physics", + "particle-physics", + "cosmology" ] }, { - "uid": "github/devitocodes/pyrevolve", - "url": "https://github.com/devitocodes/pyrevolve", - "rel": "/software/repository/github/devitocodes/pyrevolve", - "avatar": "https://avatars.githubusercontent.com/u/10018551?v=4", - "description": "Python library to manage checkpointing for adjoints", - "topics": [] - }, - { - "uid": "github/devitocodes/devito", - "url": "https://github.com/devitocodes/devito", - "rel": "/software/repository/github/devitocodes/devito", - "avatar": "https://avatars1.githubusercontent.com/u/10018551?v=4", - "description": "Code generation framework for automated finite difference computation", + "uid": "github/smsharma/mining-for-substructure-lens", + "url": "https://github.com/smsharma/mining-for-substructure-lens", + "rel": "/software/repository/github/smsharma/mining-for-substructure-lens", + "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", + "description": "Inference of substructure properties in strong lensing systems with machine learning. Code repository associated with https://arxiv.org/abs/1909.02005.", "topics": [ - "compilers", - "stencil-codes", - "finite-difference", - "sympy", - "jit", - "performance", - "fwi", - "rtm" + "gravitational-lensing", + "machine-learning" ] }, { - "uid": "github/lorenaacuna/GASTLI", - "url": "https://github.com/lorenaacuna/GASTLI", - "rel": "/software/repository/github/lorenaacuna/GASTLI", - "avatar": "https://avatars.githubusercontent.com/u/66270562?v=4", - "description": "GAS gianT modeL for Interiors", + "uid": "github/smsharma/fermi-gce-flows", + "url": "https://github.com/smsharma/fermi-gce-flows", + "rel": "/software/repository/github/smsharma/fermi-gce-flows", + "avatar": "https://avatars.githubusercontent.com/u/6607936?v=4", + "description": "Simulation-based inference for the Galactic Center gamma-ray excess. Code repository associated with https://arxiv.org/abs/2110.06931.", "topics": [] }, { - "uid": "github/RangamaniLabUCSD/smart", - "url": "https://github.com/RangamaniLabUCSD/smart", - "rel": "/software/repository/github/RangamaniLabUCSD/smart", - "avatar": "https://avatars.githubusercontent.com/u/58951527?v=4", - "description": null, + "uid": "github/julianreul/mode_behave", + "url": "https://github.com/julianreul/mode_behave", + "rel": "/software/repository/github/julianreul/mode_behave", + "avatar": "https://avatars.githubusercontent.com/u/42872728?v=4", + "description": "A Python package for estimating mixed logit models with nonparametric distributions", "topics": [] }, { - "uid": "github/abacusorg/zeldovich-PLT", - "url": "https://github.com/abacusorg/zeldovich-PLT", - "rel": "/software/repository/github/abacusorg/zeldovich-PLT", - "avatar": "https://avatars.githubusercontent.com/u/42353087?v=4", - "description": "Generates initial conditions for cosmological N-body simulations, optionally applying Particle Linear Theory corrections.", - "topics": [ - "cosmology", - "nbody", - "nbody-simulation" - ] + "uid": "github/ilikecubesnstuff/commensurability", + "url": "https://github.com/ilikecubesnstuff/commensurability", + "rel": "/software/repository/github/ilikecubesnstuff/commensurability", + "avatar": "https://avatars.githubusercontent.com/u/25328250?v=4", + "description": "Packages for calculating orbit commensurabilities.", + "topics": [] }, { - "uid": "github/flyaflya/causact", - "url": "https://github.com/flyaflya/causact", - "rel": "/software/repository/github/flyaflya/causact", - "avatar": "https://avatars.githubusercontent.com/u/17184441?v=4", - "description": "causact: R package to accelerate Bayesian analytics workflows.", + "uid": "github/c5shen/TIPP3", + "url": "https://github.com/c5shen/TIPP3", + "rel": "/software/repository/github/c5shen/TIPP3", + "avatar": "https://avatars.githubusercontent.com/u/19351031?v=4", + "description": "TIPP3 and TIPP3-fast: new phylogeny-based metagenomic profiling and taxonomic identification tool.", "topics": [] }, { - "uid": "github/ramadatta/CPgeneProfiler", - "url": "https://github.com/ramadatta/CPgeneProfiler", - "rel": "/software/repository/github/ramadatta/CPgeneProfiler", - "avatar": "https://avatars3.githubusercontent.com/u/3212461?v=4", - "description": "CPgeneProfiler R package repository", + "uid": "github/siavashk/pycpd", + "url": "https://github.com/siavashk/pycpd", + "rel": "/software/repository/github/siavashk/pycpd", + "avatar": "https://avatars.githubusercontent.com/u/1020752?v=4", + "description": "Pure Numpy Implementation of the Coherent Point Drift Algorithm", "topics": [ - "carbapenamase-genes", - "genome-assemblies", - "cp-gene", - "ncbi-blast", - "assembly-size", - "cocarriage" + "point-cloud", + "registration", + "expectation-maximization", + "python" ] }, { - "uid": "github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", - "url": "https://github.com/SnirMeiri/LCOI_local_crystalline_orientation_identifier", - "rel": "/software/repository/github/SnirMeiri/LCOI_local_crystalline_orientation_identifier", - "avatar": "https://avatars.githubusercontent.com/u/98456826?v=4", - "description": "MATLAB based application for colloidal crystal's directionality detection and analysis. Applies to microscope images of the crystal's cross-section. Able to detect triangular, rectangular and hexagonal local order.", + "uid": "github/MicGrasso/bigonlight", + "url": "https://github.com/MicGrasso/bigonlight", + "rel": "/software/repository/github/MicGrasso/bigonlight", + "avatar": "https://avatars.githubusercontent.com/u/74984781?v=4", + "description": "The BiGONLight is a Mathematica package created by Michele Grasso to study light propagation in the geometric optics regime using the Bi-local Geodesic Operator formalism.", "topics": [] }, { - "uid": "github/samwaseda/mamonca", - "url": "https://github.com/samwaseda/mamonca", - "rel": "/software/repository/github/samwaseda/mamonca", - "avatar": "https://avatars.githubusercontent.com/u/37879103?v=4", + "uid": "github/QuantumPlasma/SFQEDtoolkit", + "url": "https://github.com/QuantumPlasma/SFQEDtoolkit", + "rel": "/software/repository/github/QuantumPlasma/SFQEDtoolkit", + "avatar": "https://avatars.githubusercontent.com/u/100681113?v=4", "description": null, "topics": [] }, { - "uid": "github/nextflow-io/nextflow", - "url": "https://github.com/nextflow-io/nextflow", - "rel": "/software/repository/github/nextflow-io/nextflow", - "avatar": "https://avatars3.githubusercontent.com/u/6698688?v=4", - "description": "A DSL for data-driven computational pipelines", + "uid": "github/m-a-d-n-e-s-s/madness", + "url": "https://github.com/m-a-d-n-e-s-s/madness", + "rel": "/software/repository/github/m-a-d-n-e-s-s/madness", + "avatar": "https://avatars.githubusercontent.com/u/7550723?v=4", + "description": "Multiresolution Adaptive Numerical Environment for Scientific Simulation", + "topics": [] + }, + { + "uid": "github/biobakery/phylophlan", + "url": "https://github.com/biobakery/phylophlan", + "rel": "/software/repository/github/biobakery/phylophlan", + "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", + "description": "Precise phylogenetic analysis of microbial isolates and genomes from metagenomes", "topics": [ - "bioinformatics", - "workflow-engine", - "pipeline", - "pipeline-framework", - "nextflow", - "cloud", - "groovy", - "sge", - "slurm", - "aws", - "docker", - "singularity", - "hpc", - "singularity-containers", - "reproducible-science", - "reproducible-research", - "dataflow" + "python", + "tools", + "biobakery", + "phylogenetic-trees" ] }, { - "uid": "github/RongquanWang/ELF-DPC", - "url": "https://github.com/RongquanWang/ELF-DPC", - "rel": "/software/repository/github/RongquanWang/ELF-DPC", - "avatar": "https://avatars.githubusercontent.com/u/29010219?v=4", - "description": "An ensemble learning framework for detecting protein complexes from PPI networks", + "uid": "github/biobakery/halla", + "url": "https://github.com/biobakery/halla", + "rel": "/software/repository/github/biobakery/halla", + "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", + "description": null, "topics": [] }, { - "uid": "github/odb9402/CNNPeaks", - "url": "https://github.com/odb9402/CNNPeaks", - "rel": "/software/repository/github/odb9402/CNNPeaks", - "avatar": "https://avatars.githubusercontent.com/u/23442419?v=4", - "description": "The ChIP-Seq peak calling algorithm using convolution neural networks", + "uid": "github/biobakery/MetaPhlAn", + "url": "https://github.com/biobakery/MetaPhlAn", + "rel": "/software/repository/github/biobakery/MetaPhlAn", + "avatar": "https://avatars.githubusercontent.com/u/18152373?v=4", + "description": "MetaPhlAn is a computational tool for profiling the composition of microbial communities from metagenomic shotgun sequencing data", "topics": [ - "cnn-model", - "nvidia-docker", - "tensorflow", - "bioinformatics", - "chip-seq", - "peak-calling", - "convolutional-neural-network", - "gpu", - "docker-image", - "progressbar2", - "samtools", - "ngs-analysis", - "atac-seq" + "public", + "tools", + "biobakery", + "python", + "metagenomics" ] }, { - "uid": "github/milkschen/leviosam2", - "url": "https://github.com/milkschen/leviosam2", - "rel": "/software/repository/github/milkschen/leviosam2", - "avatar": "https://avatars.githubusercontent.com/u/9870790?v=4", - "description": "Fast and accurate coordinate conversion between assemblies", + "uid": "github/Brauckhoff/biopixR", + "url": "https://github.com/Brauckhoff/biopixR", + "rel": "/software/repository/github/Brauckhoff/biopixR", + "avatar": "https://avatars.githubusercontent.com/u/121032772?v=4", + "description": "R Package for bioimage analysis", "topics": [] }, { - "uid": "github/JKoblitz/DSMZCellDive", - "url": "https://github.com/JKoblitz/DSMZCellDive", - "rel": "/software/repository/github/JKoblitz/DSMZCellDive", - "avatar": "https://avatars.githubusercontent.com/u/22150395?v=4", - "description": null, + "uid": "github/healpy/healpy", + "url": "https://github.com/healpy/healpy", + "rel": "/software/repository/github/healpy/healpy", + "avatar": "https://avatars.githubusercontent.com/u/897950?v=4", + "description": "Python healpix maps tools", + "topics": [] + }, + { + "uid": "github/learningsimulator/learningsimulator", + "url": "https://github.com/learningsimulator/learningsimulator", + "rel": "/software/repository/github/learningsimulator/learningsimulator", + "avatar": "https://avatars.githubusercontent.com/u/61417129?v=4", + "description": "Learning Simulator: A simulation software for animal and human learning", "topics": [ - "cancer-research", - "str-profiling", - "cell-biology", - "cell-lines" + "associative-learning", + "reinforcement-learning", + "behavior", + "simulation", + "mathematical-modelling", + "gui", + "python" ] }, { - "uid": "github/awsteiner/bamr", - "url": "https://github.com/awsteiner/bamr", - "rel": "/software/repository/github/awsteiner/bamr", - "avatar": "https://avatars.githubusercontent.com/u/5480902?v=4", - "description": "Bayesian Analysis of neutron star Mass and Radius observations", + "uid": "github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", + "url": "https://github.com/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", + "rel": "/software/repository/github/primakov/DuneAI-Automated-detection-and-segmentation-of-non-small-cell-lung-cancer-computed-tomography-images", + "avatar": "https://avatars.githubusercontent.com/u/9025444?v=4", + "description": "Repository supporting the original research paper in Nature Communications (Primakov et al. 2022)", "topics": [] }, { - "uid": "github/awsteiner/o2scl", - "url": "https://github.com/awsteiner/o2scl", - "rel": "/software/repository/github/awsteiner/o2scl", - "avatar": "https://avatars.githubusercontent.com/u/5480902?v=4", - "description": "Object-oriented Scientific Computing Library", + "uid": "github/rpoleski/MulensModel", + "url": "https://github.com/rpoleski/MulensModel", + "rel": "/software/repository/github/rpoleski/MulensModel", + "avatar": "https://avatars.githubusercontent.com/u/19961701?v=4", + "description": "Microlensing Modelling package", "topics": [] }, { - "uid": "github/ybillchen/particle_spray", - "url": "https://github.com/ybillchen/particle_spray", - "rel": "/software/repository/github/ybillchen/particle_spray", - "avatar": "https://avatars.githubusercontent.com/u/33487119?v=4", - "description": "Particle spray algorithm by Chen et al. (2024).", + "uid": "github/selkamand/ggoncoplot", + "url": "https://github.com/selkamand/ggoncoplot", + "rel": "/software/repository/github/selkamand/ggoncoplot", + "avatar": "https://avatars.githubusercontent.com/u/73202525?v=4", + "description": "Easily Create Interactive Oncoplots", "topics": [] }, { - "uid": "github/Adamtaranto/mimeo", - "url": "https://github.com/Adamtaranto/mimeo", - "rel": "/software/repository/github/Adamtaranto/mimeo", - "avatar": "https://avatars.githubusercontent.com/u/2160099?v=4", - "description": "Scan genomes for internally repeated sequences, elements which are repetitive in another species, or high-identity HGT candidate regions between species.", + "uid": "github/yesint/EnCurv", + "url": "https://github.com/yesint/EnCurv", + "rel": "/software/repository/github/yesint/EnCurv", + "avatar": "https://avatars.githubusercontent.com/u/14368585?v=4", + "description": "Tools for maintaining predefined membrane curvature in MD simulations", "topics": [] }, { - "uid": "github/Adamtaranto/Yanagiba", - "url": "https://github.com/Adamtaranto/Yanagiba", - "rel": "/software/repository/github/Adamtaranto/Yanagiba", - "avatar": "https://avatars.githubusercontent.com/u/2160099?v=4", - "description": "Filter and slice Nanopore reads which have been basecalled with Albacore.", + "uid": "github/HHTpy/HHTpywrapper", + "url": "https://github.com/HHTpy/HHTpywrapper", + "rel": "/software/repository/github/HHTpy/HHTpywrapper", + "avatar": "https://avatars.githubusercontent.com/u/20867883?v=4", + "description": "Python Wrapper for Hilbert\u2013Huang Transform MATLAB Package", "topics": [] }, { - "uid": "github/gramos/imagetooth", - "url": "https://github.com/gramos/imagetooth", - "rel": "/software/repository/github/gramos/imagetooth", - "avatar": "https://avatars.githubusercontent.com/u/10948?v=4", - "description": "This library allows to generate images of teeth for odontograms with tooth faces painted", + "uid": "github/Azeret/galIMF", + "url": "https://github.com/Azeret/galIMF", + "rel": "/software/repository/github/Azeret/galIMF", + "avatar": "https://avatars.githubusercontent.com/u/22130354?v=4", + "description": "Based on : Yan, Jerabkova and Kroupa (2017, A&A) and Yan, Jerabkova, Kroupa and Vazdekis (2019, A&A): a Python3 module for computing the galaxy-wide initiall stellar mass function by integrating over a whole galaxy, parametrised by star formation rate and metallicity. ", "topics": [] }, { - "uid": "github/alejandrobll/py-sphviewer", - "url": "https://github.com/alejandrobll/py-sphviewer", - "rel": "/software/repository/github/alejandrobll/py-sphviewer", - "avatar": "https://avatars.githubusercontent.com/u/7341581?v=4", - "description": "Py-SPHViewer is a framework for rendering cosmological simulations in Python using the Smoothed Particle Hydrodynamics scheme.", - "topics": [ - "py-sphviewer", - "smoothed-particle-hydrodynamics", - "particle-data", - "python", - "visualisation", - "n-body", - "rendering", - "gas", - "sph", - "cosmological", - "simulations", - "clustering", - "neighbors", - "astronomy", - "science", - "science-research", - "parallel", - "openmp", - "python-api" - ] + "uid": "github/yuhaoran/CUBE", + "url": "https://github.com/yuhaoran/CUBE", + "rel": "/software/repository/github/yuhaoran/CUBE", + "avatar": "https://avatars.githubusercontent.com/u/6211228?v=4", + "description": "Cosmological N-body simulation code", + "topics": [] }, { - "uid": "github/oleksulkowski/Syn-CpG-Spacer", - "url": "https://github.com/oleksulkowski/Syn-CpG-Spacer", - "rel": "/software/repository/github/oleksulkowski/Syn-CpG-Spacer", - "avatar": "https://avatars.githubusercontent.com/u/63408297?v=4", - "description": "A Panel progressive web app for synonymous recoding of viral genomes with CpG dinucleotides", + "uid": "github/yuhaoran/CUBE2", + "url": "https://github.com/yuhaoran/CUBE2", + "rel": "/software/repository/github/yuhaoran/CUBE2", + "avatar": "https://avatars.githubusercontent.com/u/6211228?v=4", + "description": "CUBE2 is a open souree cosmological N-body code emphasizing memory e\ufb03ciency, com- putational performance, scalability and precision", + "topics": [] + }, + { + "uid": "github/bjmt/universalmotif", + "url": "https://github.com/bjmt/universalmotif", + "rel": "/software/repository/github/bjmt/universalmotif", + "avatar": "https://avatars.githubusercontent.com/u/24674853?v=4", + "description": "Motif manipulation functions for R.", "topics": [ - "dinucleotide-frequencies", - "genetics", - "genome-browser", - "molecular-biology", - "virology" + "r", + "motif-analysis", + "motif-enrichment-analysis", + "sequence-logo" ] }, { - "uid": "github/lberaldoesilva/tropygal", - "url": "https://github.com/lberaldoesilva/tropygal", - "rel": "/software/repository/github/lberaldoesilva/tropygal", - "avatar": "https://avatars.githubusercontent.com/u/44235490?v=4", - "description": "Entropy estimates and distribution functions for galactic dynamics", + "uid": "github/METHODS-Group/DRDMannTurb", + "url": "https://github.com/METHODS-Group/DRDMannTurb", + "rel": "/software/repository/github/METHODS-Group/DRDMannTurb", + "avatar": "https://avatars.githubusercontent.com/u/153120691?v=4", + "description": null, "topics": [] }, { - "uid": "github/lberaldoesilva/naif", - "url": "https://github.com/lberaldoesilva/naif", - "rel": "/software/repository/github/lberaldoesilva/naif", - "avatar": "https://avatars.githubusercontent.com/u/44235490?v=4", - "description": "pure-python package for numerical analysis of frequencies of numerically integrated orbits", + "uid": "github/joacoh/wise2mbh", + "url": "https://github.com/joacoh/wise2mbh", + "rel": "/software/repository/github/joacoh/wise2mbh", + "avatar": "https://avatars.githubusercontent.com/u/86896662?v=4", + "description": "WISE2MBH is a simple an effective algorithm that uses infrared cataloged data from the Wide-field Infrared Survey Explorer (WISE) to estimate the mass of super massive black holes (SMBH)", "topics": [] }, { - "uid": "github/curl/curl", - "url": "https://github.com/curl/curl", - "rel": "/software/repository/github/curl/curl", - "avatar": "https://avatars0.githubusercontent.com/u/16928085?v=4", - "description": "A command line tool and library for transferring data with URL syntax, supporting DICT, FILE, FTP, FTPS, GOPHER, GOPHERS, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, MQTT, POP3, POP3S, RTMP, RTMPS, RTSP, SCP, SFTP, SMB, SMBS, SMTP, SMTPS, TELNET and TFTP. libcurl offers a myriad of powerful features", + "uid": "github/camfort/fortran-src", + "url": "https://github.com/camfort/fortran-src", + "rel": "/software/repository/github/camfort/fortran-src", + "avatar": "https://avatars.githubusercontent.com/u/18264580?v=4", + "description": "Fortran parsing and static analysis infrastructure", "topics": [ - "http", - "https", - "ftp", - "user-agent", - "client", - "library", - "curl", - "libcurl", - "c", - "transfer-data", - "ldap", - "mqtt", - "sftp", - "scp" + "automated-refactoring", + "fortran", + "haskell", + "parser", + "static-analysis" ] }, { - "uid": "github/tuoyl/tat-pulsar", - "url": "https://github.com/tuoyl/tat-pulsar", - "rel": "/software/repository/github/tuoyl/tat-pulsar", - "avatar": "https://avatars.githubusercontent.com/u/9820896?v=4", - "description": "A Python based pulsar timing analysis tools (TAT).", - "topics": [ - "pulsar", - "python", - "timing" - ] + "uid": "github/JungleComputing/rocket", + "url": "https://github.com/JungleComputing/rocket", + "rel": "/software/repository/github/JungleComputing/rocket", + "avatar": "https://avatars.githubusercontent.com/u/34010042?v=4", + "description": "Rocket is a Constellation-based runtime system for efficient execution of all-pair compute problem on distributed heterogeneous platforms", + "topics": [] }, { - "uid": "github/tylunel/pvpumpingsystem", - "url": "https://github.com/tylunel/pvpumpingsystem", - "rel": "/software/repository/github/tylunel/pvpumpingsystem", - "avatar": "https://avatars3.githubusercontent.com/u/54322843?v=4", - "description": "Provides tools for modeling photovoltaic water pumping system", + "uid": "github/ICAMS/strucscan", + "url": "https://github.com/ICAMS/strucscan", + "rel": "/software/repository/github/ICAMS/strucscan", + "avatar": "https://avatars.githubusercontent.com/u/57955390?v=4", + "description": "A lightweight python-based framework for high-throughput material simulation", "topics": [] }, { - "uid": "github/jeffzhen/omnical", - "url": "https://github.com/jeffzhen/omnical", - "rel": "/software/repository/github/jeffzhen/omnical", - "avatar": "https://avatars.githubusercontent.com/u/7015126?v=4", - "description": "Redundant calibration code for low frequency radio interferometers, managed by Jeff Zheng", + "uid": "github/BiostatOmics/MORE", + "url": "https://github.com/BiostatOmics/MORE", + "rel": "/software/repository/github/BiostatOmics/MORE", + "avatar": "https://avatars.githubusercontent.com/u/161608679?v=4", + "description": "Discover regulatory relationships for multi-omics data using regression models", "topics": [] }, { - "uid": "github/freemed/freeshim", - "url": "https://github.com/freemed/freeshim", - "rel": "/software/repository/github/freemed/freeshim", - "avatar": "https://avatars.githubusercontent.com/u/842871?v=4", - "description": "opensource multiplatform medical device interface", + "uid": "github/BiostatOmics/Coxmos", + "url": "https://github.com/BiostatOmics/Coxmos", + "rel": "/software/repository/github/BiostatOmics/Coxmos", + "avatar": "https://avatars.githubusercontent.com/u/161608679?v=4", + "description": null, "topics": [] }, { - "uid": "github/vbakis/mrs", - "url": "https://github.com/vbakis/mrs", - "rel": "/software/repository/github/vbakis/mrs", - "avatar": "https://avatars.githubusercontent.com/u/80822881?v=4", - "description": "This repository is created for the MOS Reduction Software.", + "uid": "github/BioHPC/MegaD", + "url": "https://github.com/BioHPC/MegaD", + "rel": "/software/repository/github/BioHPC/MegaD", + "avatar": "https://avatars.githubusercontent.com/u/15250025?v=4", + "description": "Deep learning for metagenomic sample classification", "topics": [] }, { - "uid": "github/gt1/bambamc", - "url": "https://github.com/gt1/bambamc", - "rel": "/software/repository/github/gt1/bambamc", - "avatar": "https://avatars.githubusercontent.com/u/3490790?v=4", - "description": "lightweight C implementation of name collating BAM file input and BAM file output ", + "uid": "github/dparks1134/RefineM", + "url": "https://github.com/donovan-h-parks/RefineM", + "rel": "/software/repository/github/dparks1134/RefineM", + "avatar": "https://avatars.githubusercontent.com/u/3688336?v=4", + "description": "A toolbox for improving metagenome-assembled genomes.", "topics": [] }, { - "uid": "github/CGATOxford/UMI-tools", - "url": "https://github.com/CGATOxford/UMI-tools", - "rel": "/software/repository/github/CGATOxford/UMI-tools", - "avatar": "https://avatars.githubusercontent.com/u/5339854?v=4", - "description": "Tools for handling Unique Molecular Identifiers in NGS data sets", + "uid": "github/baiyueh/PANINIpy", + "url": "https://github.com/baiyueh/PANINIpy", + "rel": "/software/repository/github/baiyueh/PANINIpy", + "avatar": "https://avatars.githubusercontent.com/u/92152405?v=4", + "description": "PANINIpy: Package of Algorithms for Nonparametric Inference with Networks in Python", "topics": [] }, { - "uid": "github/Nextomics/NextDenovo", - "url": "https://github.com/Nextomics/NextDenovo", - "rel": "/software/repository/github/Nextomics/NextDenovo", - "avatar": "https://avatars.githubusercontent.com/u/17420776?v=4", - "description": "Fast and accurate de novo assembler for long reads", + "uid": "github/markusbonse/applefy", + "url": "https://github.com/markusbonse/applefy", + "rel": "/software/repository/github/markusbonse/applefy", + "avatar": "https://avatars.githubusercontent.com/u/19818846?v=4", + "description": "A Python package for calculating detection limits for exoplanet high contrast imaging (HCI) datasets.", "topics": [ - "genome-assembly", - "long-reads", - "assembler", - "oxford-nanopore", - "pacbio" + "bootstrap", + "direct-imaging", + "exoplanet-detection", + "exoplanets", + "high-contrast-imaging", + "python" ] }, - { - "uid": "github/Nextomics/nextsv", - "url": "https://github.com/Nextomics/nextsv", - "rel": "/software/repository/github/Nextomics/nextsv", - "avatar": "https://avatars.githubusercontent.com/u/17420776?v=4", - "description": "automated structural variation detection for long-read sequencing", - "topics": [] - }, { "uid": "github/XGI-MSU/WDMWaveletTransforms", "url": "https://github.com/XGI-MSU/WDMWaveletTransforms", @@ -73578,2367 +73672,2551 @@ "topics": [] }, { - "uid": "github/mkelley/zchecker", - "url": "https://github.com/mkelley/zchecker", - "rel": "/software/repository/github/mkelley/zchecker", - "avatar": "https://avatars.githubusercontent.com/u/1138643?v=4", - "description": "ZTF moving target checker for short lists of moving targets", - "topics": [] + "uid": "github/Circuitscape/Omniscape.jl", + "url": "https://github.com/Circuitscape/Omniscape.jl", + "rel": "/software/repository/github/Circuitscape/Omniscape.jl", + "avatar": "https://avatars.githubusercontent.com/u/5827361?v=4", + "description": "Functions to compute omnidirectional landscape connectivity using circuit theory and the Omniscape algorithm.", + "topics": [ + "julia-language", + "julia-package", + "connectivity", + "circuitscape", + "circuit-analysis", + "animal-movement", + "landscape-ecology", + "climate-change", + "circuit-theory", + "ecology" + ] }, { - "uid": "github/mkelley/calviacat", - "url": "https://github.com/mkelley/calviacat", - "rel": "/software/repository/github/mkelley/calviacat", - "avatar": "https://avatars.githubusercontent.com/u/1138643?v=4", - "description": "Calibrate star photometry by comparison to a catalog.", + "uid": "github/SofieVG/FlowSOM", + "url": "https://github.com/SofieVG/FlowSOM", + "rel": "/software/repository/github/SofieVG/FlowSOM", + "avatar": "https://avatars.githubusercontent.com/u/1912811?v=4", + "description": "Using self-organizing maps for visualization and interpretation of cytometry data", "topics": [] }, { - "uid": "github/ViennaRNA/RNAblueprint", - "url": "https://github.com/ViennaRNA/RNAblueprint", - "rel": "/software/repository/github/ViennaRNA/RNAblueprint", - "avatar": "https://avatars.githubusercontent.com/u/22776520?v=4", - "description": "RNAblueprint library for uniform sampling of RNA sequences given structural and sequence constraints", - "topics": [ - "rnablueprint-library", - "riboswitch", - "design", - "rna-design", - "inverse-folding", - "rna-structure", - "viennarna", - "nupack" - ] - }, - { - "uid": "github/opengeos/geoai", - "url": "https://github.com/opengeos/geoai", - "rel": "/software/repository/github/opengeos/geoai", - "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", - "description": "GeoAI: Artificial Intelligence for Geospatial Data", - "topics": [ - "ai", - "data-science", - "geoai", - "geopython", - "geospatial", - "jupyter", - "python", - "deep-learning", - "earth-observation", - "pytorch", - "remote-sensing", - "segmentation" - ] + "uid": "github/gmorras/pyEFPE", + "url": "https://github.com/gmorras/pyEFPE", + "rel": "/software/repository/github/gmorras/pyEFPE", + "avatar": "https://avatars.githubusercontent.com/u/53296008?v=4", + "description": "Waveform model for inspiralling precessing-eccentric compact binaries", + "topics": [] }, { - "uid": "github/opengeos/segment-geospatial", - "url": "https://github.com/opengeos/segment-geospatial", - "rel": "/software/repository/github/opengeos/segment-geospatial", - "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", - "description": "A Python package for segmenting geospatial data with the Segment Anything Model (SAM)", - "topics": [ - "artificial-intelligence", - "deep-learning", - "machine-learning", - "segmentation", - "geopython", - "geospatial", - "segment-anything" - ] + "uid": "github/alexrhowe/APOLLO", + "url": "https://github.com/alexrhowe/APOLLO", + "rel": "/software/repository/github/alexrhowe/APOLLO", + "avatar": "https://avatars.githubusercontent.com/u/53234440?v=4", + "description": "Atmosphere retrieval code for exoplanets", + "topics": [] }, { - "uid": "github/opengeos/HyperCoast", - "url": "https://github.com/opengeos/HyperCoast", - "rel": "/software/repository/github/opengeos/HyperCoast", - "avatar": "https://avatars.githubusercontent.com/u/129896036?v=4", - "description": "A Python Package for Visualizing and Analyzing Hyperspectral Data in Coastal Environments", - "topics": [ - "coastal", - "geospatial", - "hyperspectral", - "python", - "nasa", - "aviris", - "emit", - "ipyleaflet", - "ipywidgets", - "leafmap", - "neon", - "pace" - ] + "uid": "github/opimwue/ddop", + "url": "https://github.com/opimwue/ddop", + "rel": "/software/repository/github/opimwue/ddop", + "avatar": "https://avatars.githubusercontent.com/u/83957455?v=4", + "description": "https://opimwue.github.io/ddop/.", + "topics": [] }, { - "uid": "github/chaoliu-cl/textAnnotatoR", - "url": "https://github.com/chaoliu-cl/textAnnotatoR", - "rel": "/software/repository/github/chaoliu-cl/textAnnotatoR", - "avatar": "https://avatars.githubusercontent.com/u/99229010?v=4", - "description": "Interactive Text Annotation Tool with Shiny GUI", + "uid": "github/Joost987/MONDPMesh", + "url": "https://github.com/Joost987/MONDPMesh", + "rel": "/software/repository/github/Joost987/MONDPMesh", + "avatar": "https://avatars.githubusercontent.com/u/114094051?v=4", + "description": "Particle mesh code for modified Newtonian dynamics simulations", "topics": [] }, { - "uid": "github/ejmackrell/tidyproteomics-interactive", - "url": "https://github.com/ejmackrell/tidyproteomics-interactive", - "rel": "/software/repository/github/ejmackrell/tidyproteomics-interactive", - "avatar": "https://avatars.githubusercontent.com/u/32281663?v=4", - "description": "Interactive Shiny application for tidyproteomics", + "uid": "github/NicolasHug/Surprise", + "url": "https://github.com/NicolasHug/Surprise", + "rel": "/software/repository/github/NicolasHug/Surprise", + "avatar": "https://avatars2.githubusercontent.com/u/1190450?v=4", + "description": "A Python scikit for building and analyzing recommender systems", "topics": [ - "proteins", - "data-exploration", - "differential-expression", - "mass-spectrometry", - "ontology-enrichment", - "peptides", - "proteomics", - "shiny", - "shiny-apps" + "recommender", + "systems", + "recommendation", + "svd", + "matrix", + "factorization" ] }, { - "uid": "github/MJCliffe/PASCal", - "url": "https://github.com/MJCliffe/PASCal", - "rel": "/software/repository/github/MJCliffe/PASCal", - "avatar": "https://avatars.githubusercontent.com/u/10605244?v=4", - "description": "Codebase for PASCal strain calculator", + "uid": "github/rnajena/sugar", + "url": "https://github.com/rnajena/sugar", + "rel": "/software/repository/github/rnajena/sugar", + "avatar": "https://avatars.githubusercontent.com/u/45449800?v=4", + "description": "S*R -- A Python framework for bioinformatics", "topics": [] }, { - "uid": "github/edwardoughton/itmlogic", - "url": "https://github.com/edwardoughton/itmlogic", - "rel": "/software/repository/github/edwardoughton/itmlogic", - "avatar": "https://avatars0.githubusercontent.com/u/11899151?v=4", - "description": "Longley-Rice Irregular Terrain Model (itmlogic)", - "topics": [] + "uid": "github/ElectionDataAnalysis/electiondata", + "url": "https://github.com/ElectionDataAnalysis/electiondata", + "rel": "/software/repository/github/ElectionDataAnalysis/electiondata", + "avatar": "https://avatars.githubusercontent.com/u/70550634?v=4", + "description": "Tools for consolidation and analysis of raw election results from the most reliable sources -- the election agencies themselves.", + "topics": [ + "election", + "election-data", + "common-data-format" + ] }, { - "uid": "github/mlujnie/simple", - "url": "https://github.com/mlujnie/simple", - "rel": "/software/repository/github/mlujnie/simple", - "avatar": "https://avatars.githubusercontent.com/u/44762816?v=4", - "description": "Simple Intensity Map Producer for Line Emission (public code)", + "uid": "github/legolason/PyQSOFit", + "url": "https://github.com/legolason/PyQSOFit", + "rel": "/software/repository/github/legolason/PyQSOFit", + "avatar": "https://avatars.githubusercontent.com/u/8182924?v=4", + "description": "A code to fit the spectrum of quasar", "topics": [] }, { - "uid": "github/brainglobe/bg-atlasapi", - "url": "https://github.com/brainglobe/bg-atlasapi", - "rel": "/software/repository/github/brainglobe/bg-atlasapi", - "avatar": "https://avatars1.githubusercontent.com/u/64580400?v=4", - "description": "A lightweight python module to interact with atlases for systems neuroscience", + "uid": "github/catboost/catboost", + "url": "https://github.com/catboost/catboost", + "rel": "/software/repository/github/catboost/catboost", + "avatar": "https://avatars.githubusercontent.com/u/29043415?v=4", + "description": "A fast, scalable, high performance Gradient Boosting on Decision Trees library, used for ranking, classification, regression and other machine learning tasks for Python, R, Java, C++. Supports computation on CPU and GPU.", "topics": [ - "neuroscience", + "machine-learning", + "decision-trees", + "gradient-boosting", + "gbm", + "gbdt", "python", - "microscopy", - "registration", - "visualisation", - "brain", - "atlases" + "r", + "kaggle", + "gpu-computing", + "catboost", + "tutorial", + "categorical-features", + "gpu", + "coreml", + "data-science", + "big-data", + "cuda", + "data-mining" ] }, { - "uid": "github/fgerick/Limace.jl", - "url": "https://github.com/fgerick/Limace.jl", - "rel": "/software/repository/github/fgerick/Limace.jl", - "avatar": "https://avatars.githubusercontent.com/u/12558460?v=4", - "description": null, - "topics": [] + "uid": "github/wiederm/transformato", + "url": "https://github.com/wiederm/transformato", + "rel": "/software/repository/github/wiederm/transformato", + "avatar": "https://avatars.githubusercontent.com/u/31651017?v=4", + "description": "Set up relative free energy calculations using a common scaffold", + "topics": [ + "charmm-gui", + "free-energy-calculations" + ] }, { - "uid": "github/al-mcintyre/mCaller", - "url": "https://github.com/al-mcintyre/mCaller", - "rel": "/software/repository/github/al-mcintyre/mCaller", - "avatar": "https://avatars.githubusercontent.com/u/13323675?v=4", - "description": "A python program to call methylation (m6A in DNA) from nanopore signal data ", + "uid": "github/shangguandong1996/FindIT2", + "url": "https://github.com/shangguandong1996/FindIT2", + "rel": "/software/repository/github/shangguandong1996/FindIT2", + "avatar": "https://avatars.githubusercontent.com/u/22555126?v=4", + "description": null, "topics": [] }, { - "uid": "github/dmvandamt/beyonce", - "url": "https://github.com/dmvandamt/beyonce", - "rel": "/software/repository/github/dmvandamt/beyonce", - "avatar": "https://avatars.githubusercontent.com/u/159004461?v=4", + "uid": "github/icbm-iupui/STAFF", + "url": "https://github.com/icbm-iupui/STAFF", + "rel": "/software/repository/github/icbm-iupui/STAFF", + "avatar": "https://avatars3.githubusercontent.com/u/7242496?v=4", "description": null, "topics": [] }, { - "uid": "github/COSMIC-PopSynth/COSMIC", - "url": "https://github.com/COSMIC-PopSynth/COSMIC", - "rel": "/software/repository/github/COSMIC-PopSynth/COSMIC", - "avatar": "https://avatars.githubusercontent.com/u/32782229?v=4", - "description": "COSMIC (Compact Object Synthesis and Monte Carlo Investigation Code)", + "uid": "github/ELeeAstro/mini_chem", + "url": "https://github.com/ELeeAstro/mini_chem", + "rel": "/software/repository/github/ELeeAstro/mini_chem", + "avatar": "https://avatars.githubusercontent.com/u/38210132?v=4", + "description": "An efficient, lightweight chemical kinetic scheme for GCM models.", "topics": [] }, { - "uid": "github/natelust/least_asymmetry", - "url": "https://github.com/natelust/least_asymmetry", - "rel": "/software/repository/github/natelust/least_asymmetry", - "avatar": "https://avatars.githubusercontent.com/u/6371766?v=4", - "description": "This code is to find the center of a distribution of light in an image using the least asymmetry method. The code also contains center of light and fitting a Gaussian routines as well. All functions are designed to take optional weights", + "uid": "github/ELeeAstro/gCMCRT", + "url": "https://github.com/ELeeAstro/gCMCRT", + "rel": "/software/repository/github/ELeeAstro/gCMCRT", + "avatar": "https://avatars.githubusercontent.com/u/38210132?v=4", + "description": "3D Monte Carlo Radiative Transfer for exoplanet atmospheres using GPUs.", "topics": [] }, { - "uid": "github/neuroanatomy/reorient", - "url": "https://github.com/neuroanatomy/reorient", - "rel": "/software/repository/github/neuroanatomy/reorient", - "avatar": "https://avatars1.githubusercontent.com/u/11254134?v=4", - "description": "A tool for reorienting and cropping MRI data", + "uid": "github/wrenfold/wrenfold", + "url": "https://github.com/wrenfold/wrenfold", + "rel": "/software/repository/github/wrenfold/wrenfold", + "avatar": "https://avatars.githubusercontent.com/u/167943873?v=4", + "description": "Toolkit for generating code from symbolic math expressions.", "topics": [ - "hacktoberfest" + "code-generation", + "computer-vision", + "mathematics", + "robotics", + "symbolic-math" ] }, { - "uid": "github/neuroanatomy/thresholdmann", - "url": "https://github.com/neuroanatomy/thresholdmann", - "rel": "/software/repository/github/neuroanatomy/thresholdmann", - "avatar": "https://avatars.githubusercontent.com/u/11254134?v=4", - "description": "A tool to apply a smoothly varying threshold to a nifti image", - "topics": [ - "hacktoberfest" - ] + "uid": "github/AstarVienna/AnisoCADO", + "url": "https://github.com/AstarVienna/AnisoCADO", + "rel": "/software/repository/github/AstarVienna/AnisoCADO", + "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", + "description": "A package to generate off-axis PSFs for the SCAO mode for MICADO at the ELT", + "topics": [] }, { - "uid": "github/koenderks/jaspAudit", - "url": "https://github.com/koenderks/jaspAudit", - "rel": "/software/repository/github/koenderks/jaspAudit", - "avatar": "https://avatars.githubusercontent.com/u/25059399?v=4", - "description": "The Audit module is developed to facilitate statistical auditing in both Bayesian and classical manifestations. The main feature is a workflow that helps guide auditors through the sampling process. Additionally, there are stand-alone analyses for planning, selecting, and evaluating a sample. The module is based on the R package jfa.", + "uid": "github/AstarVienna/ScopeSim_Templates", + "url": "https://github.com/AstarVienna/ScopeSim_Templates", + "rel": "/software/repository/github/AstarVienna/ScopeSim_Templates", + "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", + "description": null, "topics": [] }, { - "uid": "github/finsberg/gotranx", - "url": "https://github.com/finsberg/gotranx", - "rel": "/software/repository/github/finsberg/gotranx", - "avatar": "https://avatars.githubusercontent.com/u/2010323?v=4", - "description": "Next generation ODE translator", - "topics": [ - "ode", - "parser", - "parsing", - "gotran", - "code-generation" - ] + "uid": "github/AstarVienna/Pyckles", + "url": "https://github.com/AstarVienna/Pyckles", + "rel": "/software/repository/github/AstarVienna/Pyckles", + "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", + "description": "A super lightweight interface to load spectra from the Pickles 1998 catalogue", + "topics": [] }, { - "uid": "github/finsberg/fenicsx-beat", - "url": "https://github.com/finsberg/fenicsx-beat", - "rel": "/software/repository/github/finsberg/fenicsx-beat", - "avatar": "https://avatars.githubusercontent.com/u/2010323?v=4", - "description": null, - "topics": [ - "cardiac", - "ecg", - "electrophysiology", - "fenicsx", - "finite-element-analysis", - "monodomain-model" - ] + "uid": "github/AstarVienna/irdb", + "url": "https://github.com/AstarVienna/irdb", + "rel": "/software/repository/github/AstarVienna/irdb", + "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", + "description": "A database containing instrument data for infrared telescopes", + "topics": [] }, { - "uid": "github/Xia-Yijie/Xponge", - "url": "https://github.com/Xia-Yijie/Xponge", - "rel": "/software/repository/github/Xia-Yijie/Xponge", - "avatar": "https://avatars.githubusercontent.com/u/70470814?v=4", - "description": "A lightweight and easy to customize python package to perform pre- and post-processing of molecular modelling", + "uid": "github/AstarVienna/skycalc_ipy", + "url": "https://github.com/AstarVienna/skycalc_ipy", + "rel": "/software/repository/github/AstarVienna/skycalc_ipy", + "avatar": "https://avatars.githubusercontent.com/u/81577446?v=4", + "description": "iPython version of skycalc_cli", + "topics": [] + }, + { + "uid": "github/ejhigson/dyPolyChord", + "url": "https://github.com/ejhigson/dyPolyChord", + "rel": "/software/repository/github/ejhigson/dyPolyChord", + "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", + "description": "Super fast dynamic nested sampling with PolyChord (Python, C++ and Fortran likelihoods).", "topics": [ - "molecular-dynamics", - "molecular-modelling" + "nested-sampling", + "dynamic-nested-sampling" ] }, { - "uid": "github/Junwu302/HiFun", - "url": "https://github.com/Junwu302/HiFun", - "rel": "/software/repository/github/Junwu302/HiFun", - "avatar": "https://avatars.githubusercontent.com/u/49974219?v=4", - "description": "Homology Independent Protein Function prediction on Protein-Language Self-Attention Model", - "topics": [] + "uid": "github/ejhigson/nestcheck", + "url": "https://github.com/ejhigson/nestcheck", + "rel": "/software/repository/github/ejhigson/nestcheck", + "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", + "description": "Error analysis, diagnostic tests and plots for nested sampling calculations.", + "topics": [ + "nested-sampling", + "dynamic-nested-sampling", + "bayesian-inference", + "error-analysis", + "sampling-error", + "python" + ] }, { - "uid": "github/SciLifeLab/TIDDIT", - "url": "https://github.com/SciLifeLab/TIDDIT", - "rel": "/software/repository/github/SciLifeLab/TIDDIT", - "avatar": "https://avatars.githubusercontent.com/u/713611?v=4", - "description": "TIDDIT - structural variant calling", - "topics": [] + "uid": "github/ejhigson/perfectns", + "url": "https://github.com/ejhigson/perfectns", + "rel": "/software/repository/github/ejhigson/perfectns", + "avatar": "https://avatars.githubusercontent.com/u/18406298?v=4", + "description": "\"Perfect\" dynamic and standard nested sampling for spherically symmetric likelihoods and priors.", + "topics": [ + "nested-sampling", + "dynamic-nested-sampling", + "pure-python", + "bayesian-inference" + ] }, { - "uid": "github/dfguan/purge_dups", - "url": "https://github.com/dfguan/purge_dups", - "rel": "/software/repository/github/dfguan/purge_dups", - "avatar": "https://avatars.githubusercontent.com/u/6100864?v=4", - "description": "haplotypic duplication identification tool", + "uid": "github/hippalectryon-0/pyloggrid", + "url": "https://github.com/hippalectryon-0/pyloggrid", + "rel": "/software/repository/github/hippalectryon-0/pyloggrid", + "avatar": "https://avatars.githubusercontent.com/u/6502864?v=4", + "description": "Public docs for the python package pyloggrid", "topics": [] }, { - "uid": "github/rhysf/HaplotypeTools", - "url": "https://github.com/rhysf/HaplotypeTools", - "rel": "/software/repository/github/rhysf/HaplotypeTools", - "avatar": "https://avatars.githubusercontent.com/u/3695082?v=4", - "description": "A toolkit for identifying recombination and recombinant genotypes", + "uid": "github/BleekerLab/PhenoFeatureFinder", + "url": "https://github.com/BleekerLab/PhenoFeatureFinder", + "rel": "/software/repository/github/BleekerLab/PhenoFeatureFinder", + "avatar": "https://avatars.githubusercontent.com/u/24551794?v=4", + "description": "A Python package dedicated to identifying plant metabolite features related to insect resistance", "topics": [] }, { - "uid": "github/c-martinez/BeyondTheBook", - "url": "https://github.com/c-martinez/BeyondTheBook", - "rel": "/software/repository/github/c-martinez/BeyondTheBook", - "avatar": "https://avatars3.githubusercontent.com/u/7782231?v=4", - "description": "Using Wikipedia to assess the translatability of text.", + "uid": "github/lifs-tools/jmzTab-m", + "url": "https://github.com/lifs-tools/jmzTab-m", + "rel": "/software/repository/github/lifs-tools/jmzTab-m", + "avatar": "https://avatars1.githubusercontent.com/u/43466647?v=4", + "description": "Reference implementation for mzTab-M 2.0 for metabolomics", "topics": [] }, { - "uid": "github/YinanZhao21/SOAP_GPU", - "url": "https://github.com/YinanZhao21/SOAP_GPU", - "rel": "/software/repository/github/YinanZhao21/SOAP_GPU", - "avatar": "https://avatars.githubusercontent.com/u/104948851?v=4", - "description": null, - "topics": [] + "uid": "github/lifs-tools/goslin", + "url": "https://github.com/lifs-tools/goslin", + "rel": "/software/repository/github/lifs-tools/goslin", + "avatar": "https://avatars.githubusercontent.com/u/43466647?v=4", + "description": "Goslin is the Grammar on succinct lipid nomenclature.", + "topics": [ + "parsing", + "nomenclature", + "grammar", + "metabolomics", + "mass-spectrometry", + "lipid", + "lipidomics" + ] }, { - "uid": "github/rajeshrinet/pystokes", - "url": "https://github.com/rajeshrinet/pystokes", - "rel": "/software/repository/github/rajeshrinet/pystokes", - "avatar": "https://avatars2.githubusercontent.com/u/5037991?v=4", - "description": "PyStokes: phoresis and Stokesian hydrodynamics in Python: https://github.com/rajeshrinet/pystokes", + "uid": "github/aidenlab/juicer", + "url": "https://github.com/aidenlab/juicer", + "rel": "/software/repository/github/aidenlab/juicer", + "avatar": "https://avatars.githubusercontent.com/u/2790252?v=4", + "description": "A One-Click System for Analyzing Loop-Resolution Hi-C Experiments", "topics": [ - "hydrodynamic-interactions", - "phoretic-interactions", - "force-fields", - "stokesian-hydrodynamics", - "active-particles", - "colloids", - "stokes-flow", - "traction", - "python", - "cython", - "phase-separation", - "crystallization", - "pystokes", - "active-colloids", - "autophoretic-suspensions" + "3d-genome", + "3d-genome-browser", + "genomics", + "hi-c", + "bioinformatics", + "ngs" ] }, { - "uid": "github/nomad-coe/greenX", - "url": "https://github.com/nomad-coe/greenX", - "rel": "/software/repository/github/nomad-coe/greenX", - "avatar": "https://avatars.githubusercontent.com/u/14835914?v=4", - "description": "Library for Green\u2019s function based electronic structure theory calculations", + "uid": "github/tjiangHIT/cuteSV", + "url": "https://github.com/tjiangHIT/cuteSV", + "rel": "/software/repository/github/tjiangHIT/cuteSV", + "avatar": "https://avatars.githubusercontent.com/u/7637156?v=4", + "description": "Long read based human genomic structural variation detection with cuteSV", "topics": [ - "exascale", - "fortran", - "greens-functions" + "structural-variation", + "pacbio-data", + "oxford-nanopore" ] }, { - "uid": "github/s-abbas/robnptests", - "url": "https://github.com/s-abbas/robnptests", - "rel": "/software/repository/github/s-abbas/robnptests", - "avatar": "https://avatars.githubusercontent.com/u/10209088?v=4", - "description": "Robust two-sample tests for the location problem", + "uid": "github/nuclear-multimessenger-astronomy/nmma", + "url": "https://github.com/nuclear-multimessenger-astronomy/nmma", + "rel": "/software/repository/github/nuclear-multimessenger-astronomy/nmma", + "avatar": "https://avatars.githubusercontent.com/u/98920591?v=4", + "description": "A pythonic library for probing nuclear physics and cosmology with multimessenger analysis", "topics": [] }, { - "uid": "github/AemulusProject/bias_emulator", - "url": "https://github.com/AemulusProject/bias_emulator", - "rel": "/software/repository/github/AemulusProject/bias_emulator", - "avatar": "https://avatars.githubusercontent.com/u/38292013?v=4", - "description": "Emulator for the halo bias from The Aemulus Project.", + "uid": "github/chombo-discharge/chombo-discharge", + "url": "https://github.com/chombo-discharge/chombo-discharge", + "rel": "/software/repository/github/chombo-discharge/chombo-discharge", + "avatar": "https://avatars.githubusercontent.com/u/82454163?v=4", + "description": "Beta release of chombo-discharge, a research code for low-temperature plasma which uses a Cartesian cut-cell formalism.", "topics": [] }, { - "uid": "github/e-mental-health/data-processing", - "url": "https://github.com/e-mental-health/data-processing", - "rel": "/software/repository/github/e-mental-health/data-processing", - "avatar": "https://avatars.githubusercontent.com/u/38315264?v=4", - "description": "Data processing scripts for the project What Works When for Whom?", + "uid": "github/ypmen/PulsarX", + "url": "https://github.com/ypmen/PulsarX", + "rel": "/software/repository/github/ypmen/PulsarX", + "avatar": "https://avatars.githubusercontent.com/u/16458116?v=4", + "description": "Pulsar searching", "topics": [] }, { - "uid": "github/e-mental-health/orange-hackathon", - "url": "https://github.com/e-mental-health/orange-hackathon", - "rel": "/software/repository/github/e-mental-health/orange-hackathon", - "avatar": "https://avatars.githubusercontent.com/u/38315264?v=4", - "description": "Orange modules for text processing in the project What Works When for Whom? ", + "uid": "github/dmilakovic/QSOSIM10", + "url": "https://github.com/dmilakovic/QSOSIM10", + "rel": "/software/repository/github/dmilakovic/QSOSIM10", + "avatar": "https://avatars.githubusercontent.com/u/8346157?v=4", + "description": "Fortran code to generate artificial QSO spectra", "topics": [] }, { - "uid": "github/TRI-AMDD/GMP-featurizer", - "url": "https://github.com/TRI-AMDD/GMP-featurizer", - "rel": "/software/repository/github/TRI-AMDD/GMP-featurizer", - "avatar": "https://avatars.githubusercontent.com/u/62159728?v=4", - "description": "Feature calculator for GMP features", + "uid": "github/MIT-LAE/TASOPT.jl", + "url": "https://github.com/MIT-LAE/TASOPT.jl", + "rel": "/software/repository/github/MIT-LAE/TASOPT.jl", + "avatar": "https://avatars.githubusercontent.com/u/98771357?v=4", + "description": "Medium fidelity aircraft-propulsion system design and optimization. ", "topics": [] }, { - "uid": "github/aslan-ng/keepdelta", - "url": "https://github.com/aslan-ng/keepdelta", - "rel": "/software/repository/github/aslan-ng/keepdelta", - "avatar": "https://avatars.githubusercontent.com/u/42834665?v=4", - "description": "A Python Library for Human-Readable Data Differencing", - "topics": [ - "data-structures", - "delta-compression", - "delta-encoding", - "python", - "sensing", - "simulation", - "change-tracking", - "diff", - "data-differencing", - "differential-compression", - "human-readable", - "nested", - "reconstruction", - "keepdelta", - "recursive" - ] + "uid": "github/jcibanezm/DustCharge", + "url": "https://github.com/jcibanezm/DustCharge", + "rel": "/software/repository/github/jcibanezm/DustCharge", + "avatar": "https://avatars.githubusercontent.com/u/3493686?v=4", + "description": "Calculate the equilibrium charge distribution for a dust grain of a given size and composition, depending on the local interstellar medium conditions, such as: density, temperature, ionization fraction, local radiation field strength and cosmic ray ionization fraction.", + "topics": [] }, { - "uid": "github/tiberioap/grav_waldo", - "url": "https://github.com/tiberioap/grav_waldo", - "rel": "/software/repository/github/tiberioap/grav_waldo", - "avatar": "https://avatars.githubusercontent.com/u/51127235?v=4", - "description": "Waveform anomaly detector", + "uid": "github/ComparativeGenomicsToolkit/cactus", + "url": "https://github.com/ComparativeGenomicsToolkit/cactus", + "rel": "/software/repository/github/ComparativeGenomicsToolkit/cactus", + "avatar": "https://avatars.githubusercontent.com/u/22846829?v=4", + "description": "Official home of genome aligner based upon notion of Cactus graphs", "topics": [] }, { - "uid": "github/ranocha/SummationByPartsOperators.jl", - "url": "https://github.com/ranocha/SummationByPartsOperators.jl", - "rel": "/software/repository/github/ranocha/SummationByPartsOperators.jl", - "avatar": "https://avatars.githubusercontent.com/u/12693098?v=4", - "description": "A Julia library of summation-by-parts (SBP) operators used in finite difference, Fourier pseudospectral, continuous Galerkin, and discontinuous Galerkin methods to get provably stable semidiscretizations, paying special attention to boundary conditions.", + "uid": "github/twesterhout/lattice-symmetries", + "url": "https://github.com/twesterhout/lattice-symmetries", + "rel": "/software/repository/github/twesterhout/lattice-symmetries", + "avatar": "https://avatars.githubusercontent.com/u/14264576?v=4", + "description": "A package to simplify working with symmetry-adapted quantum many-body bases. Provides a good foundation for writing custom exact diagonalization and variational Monte Carlo software", "topics": [ - "finite-difference", - "summation-by-parts", - "sbp", - "boundary-conditions", - "julia", - "hacktoberfest", - "discontinuous-galerkin", - "continuous-galerkin", - "fourier", - "derivative-operator", - "dgsem", - "cgsem" + "lattice-symmetries", + "symmetries", + "symmetry-groups", + "c", + "cpp17", + "quantum-mechanics", + "many-body-physics", + "exact-diagonalization", + "permutation", + "bit-manipulation", + "neural-network" ] }, { - "uid": "github/danielemichilli/DM_phase", - "url": "https://github.com/danielemichilli/DM_phase", - "rel": "/software/repository/github/danielemichilli/DM_phase", - "avatar": "https://avatars.githubusercontent.com/u/7848257?v=4", - "description": "Tool to calculate the best dispersion measure for a burst using phase information.", - "topics": [] - }, - { - "uid": "github/danielemichilli/SpS", - "url": "https://github.com/danielemichilli/SpS", - "rel": "/software/repository/github/danielemichilli/SpS", - "avatar": "https://avatars.githubusercontent.com/u/7848257?v=4", - "description": "Single-pulse Searcher", - "topics": [] - }, - { - "uid": "github/cdfortenbach/JET", - "url": "https://github.com/cdfortenbach/JET", - "rel": "/software/repository/github/cdfortenbach/JET", - "avatar": "https://avatars.githubusercontent.com/u/52048879?v=4", - "description": "Computer tool that can be used to optimize lists of exoplanet targets for atmospheric characterization by JWST.", - "topics": [] + "uid": "github/the-rccg/hw2d", + "url": "https://github.com/the-rccg/hw2d", + "rel": "/software/repository/github/the-rccg/hw2d", + "avatar": "https://avatars.githubusercontent.com/u/28964733?v=4", + "description": "Reference implementation for the Hasegawa-Wakatani model of plasma turbulence inside nuclear fusion reactors in two dimensions", + "topics": [ + "fluid-dynamics", + "fluid-simulation", + "fusion", + "plasma-physics", + "simulations" + ] }, { - "uid": "github/StephenJHardy/SL1M", - "url": "https://github.com/StephenJHardy/SL1M", - "rel": "/software/repository/github/StephenJHardy/SL1M", - "avatar": "https://avatars.githubusercontent.com/u/4343871?v=4", - "description": "Radio Synthesis Deconvolution using L1 Minimisation", + "uid": "github/desihub/fastspecfit", + "url": "https://github.com/desihub/fastspecfit", + "rel": "/software/repository/github/desihub/fastspecfit", + "avatar": "https://avatars.githubusercontent.com/u/9540621?v=4", + "description": "Fast (simple) spectral synthesis and emission-line fitting of DESI spectra.", "topics": [] }, { - "uid": "github/bsumlin/PyMieScatt", - "url": "https://github.com/bsumlin/PyMieScatt", - "rel": "/software/repository/github/bsumlin/PyMieScatt", - "avatar": "https://avatars.githubusercontent.com/u/30328179?v=4", - "description": "A collection of forward and inverse Mie solving routines for Python 3, based on Bohren and Huffman's Mie Theory derivations", - "topics": [ - "python3", - "python-3", - "optics", - "light-scattering", - "electromagnetics", - "physics", - "mie", - "aerosol", - "atmospheric-science", - "atmospheric-scattering", - "science" - ] - }, - { - "uid": "github/equitable-equations/fqar", - "url": "https://github.com/equitable-equations/fqar", - "rel": "/software/repository/github/equitable-equations/fqar", - "avatar": "https://avatars.githubusercontent.com/u/110704949?v=4", - "description": "The fqar package provides R tools for downloading and analyzing floristic quality assessment data from www.universalFQA.org", + "uid": "github/desihub/desitarget", + "url": "https://github.com/desihub/desitarget", + "rel": "/software/repository/github/desihub/desitarget", + "avatar": "https://avatars.githubusercontent.com/u/9540621?v=4", + "description": "DESI Targeting", "topics": [] }, { - "uid": "github/philres/catfishq", - "url": "https://github.com/philres/catfishq", - "rel": "/software/repository/github/philres/catfishq", - "avatar": "https://avatars.githubusercontent.com/u/2323996?v=4", - "description": "Cat FASTQ files", + "uid": "github/torrance/pigi", + "url": "https://github.com/torrance/Pigi", + "rel": "/software/repository/github/torrance/pigi", + "avatar": "https://avatars.githubusercontent.com/u/90064?v=4", + "description": "Pigi (pronounced like 'piggy') is the parallel interfermetric GPU imager for producing images from radio astronomy observations.", "topics": [] }, { - "uid": "github/philres/ngmlr", - "url": "https://github.com/philres/ngmlr", - "rel": "/software/repository/github/philres/ngmlr", - "avatar": "https://avatars.githubusercontent.com/u/2323996?v=4", - "description": "NGMLR is a long-read mapper designed to align PacBio or Oxford Nanopore (standard and ultra-long) to a reference genome with a focus on reads that span structural variations", + "uid": "github/RECETOX/RIAssigner", + "url": "https://github.com/RECETOX/RIAssigner", + "rel": "/software/repository/github/RECETOX/RIAssigner", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": "RIAssigner is a python tool for retention index (RI) computation for GC-MS data.", "topics": [ - "next-generation-sequencing", - "pacbio", - "oxford-nanopore", - "mapper", - "structural-variations", - "long-read", - "alignment", - "bioconda", - "docker" + "mass-spectrometry", + "hacktoberfest" ] }, { - "uid": "github/liulizhi1996/HPODNets", - "url": "https://github.com/liulizhi1996/HPODNets", - "rel": "/software/repository/github/liulizhi1996/HPODNets", - "avatar": "https://avatars.githubusercontent.com/u/30016094?v=4", - "description": "HPODNets: deep graph convolutional networks for predicting human protein-phenotype associations", + "uid": "github/RECETOX/MSMetaEnhancer", + "url": "https://github.com/RECETOX/MSMetaEnhancer", + "rel": "/software/repository/github/RECETOX/MSMetaEnhancer", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": "Tool for mass spectra metadata annotation.", "topics": [ - "graph-convolutional-network", - "human-phenotype-ontology" + "hacktoberfest", + "annotations", + "python", + "usegalaxy", + "mass-spectrometry" ] }, { - "uid": "github/medbioinf/pia", - "url": "https://github.com/medbioinf/pia", - "rel": "/software/repository/github/medbioinf/pia", - "avatar": "https://avatars.githubusercontent.com/u/139237371?v=4", - "description": ":books: :microscope: PIA - Protein Inference Algorithms", + "uid": "github/RECETOX/recetox-aplcms", + "url": "https://github.com/RECETOX/recetox-aplcms", + "rel": "/software/repository/github/RECETOX/recetox-aplcms", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": "This is a custom fork of apLCMS containing adaptations for large scale studies.", "topics": [ - "proteomics", - "protein-inference", - "protein", - "spectrum-identification", - "search-engine", - "inference" + "mass-spectrometry", + "peak-detection", + "lcms", + "hacktoberfest" ] }, { - "uid": "github/medbioinf/macpepdb-frontend", - "url": "https://github.com/medbioinf/macpepdb-frontend", - "rel": "/software/repository/github/medbioinf/macpepdb-frontend", - "avatar": "https://avatars.githubusercontent.com/u/139237371?v=4", - "description": "WASM frontend to keep up with MaCPepDB", - "topics": [] - }, - { - "uid": "github/steven-murray/pydftools", - "url": "https://github.com/steven-murray/pydftools", - "rel": "/software/repository/github/steven-murray/pydftools", - "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", - "description": "A pure-python port of the R dftools package", - "topics": [] - }, - { - "uid": "github/steven-murray/powerbox", - "url": "https://github.com/steven-murray/powerbox", - "rel": "/software/repository/github/steven-murray/powerbox", - "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", - "description": "A python package for making arbitrarily structured, arbitrary-dimension boxes", + "uid": "github/RECETOX/recetox-msfinder", + "url": "https://github.com/RECETOX/recetox-msfinder", + "rel": "/software/repository/github/RECETOX/recetox-msfinder", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": null, "topics": [] }, { - "uid": "github/steven-murray/mrpy", - "url": "https://github.com/steven-murray/mrpy", - "rel": "/software/repository/github/steven-murray/mrpy", - "avatar": "https://avatars.githubusercontent.com/u/1272030?v=4", - "description": "A Python package for calculations with the MRP parameterisation of the Halo Mass Function.", - "topics": [] + "uid": "github/RECETOX/recetox-xMSannotator", + "url": "https://github.com/RECETOX/recetox-xMSannotator", + "rel": "/software/repository/github/RECETOX/recetox-xMSannotator", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": "This is a custom adaptation of the original version of xMSannotator. It is a complete rewrite of the original functionality, following the same program structure.", + "topics": [ + "mass-spectrometry", + "hacktoberfest" + ] }, { - "uid": "github/ExObsSim/ExoRad2-public", - "url": "https://github.com/ExObsSim/ExoRad2-public", - "rel": "/software/repository/github/ExObsSim/ExoRad2-public", - "avatar": "https://avatars.githubusercontent.com/u/68009281?v=4", - "description": "ExoRad, the generic point source radiometric model.", + "uid": "github/RECETOX/wtv", + "url": "https://github.com/RECETOX/wtv", + "rel": "/software/repository/github/RECETOX/wtv", + "avatar": "https://avatars.githubusercontent.com/u/69039108?v=4", + "description": "An implementation of ion selection based on WTV-2.0", "topics": [] }, { - "uid": "github/OceanGenomics/mudskipper", - "url": "https://github.com/OceanGenomics/mudskipper", - "rel": "/software/repository/github/OceanGenomics/mudskipper", - "avatar": "https://avatars.githubusercontent.com/u/41634132?v=4", - "description": "A tool for projecting genomic alignments to transcriptomic coordinates", + "uid": "github/fabian-sp/GGLasso", + "url": "https://github.com/fabian-sp/GGLasso", + "rel": "/software/repository/github/fabian-sp/GGLasso", + "avatar": "https://avatars.githubusercontent.com/u/51907567?v=4", + "description": "Implementations for solving the Group and Fused Graphical Lasso problem", "topics": [ - "bioinformatics", - "rna-seq", - "scrna-seq", - "transcriptomics", - "converter" + "graphical-models", + "optimization", + "latent-variable-models", + "network-inference", + "graphical-lasso" ] }, { - "uid": "github/landoskape/syd", - "url": "https://github.com/landoskape/syd", - "rel": "/software/repository/github/landoskape/syd", - "avatar": "https://avatars.githubusercontent.com/u/17303166?v=4", - "description": "A package to help you share your data by making GUIs the easiest thing in the world!", + "uid": "github/frank1010111/pywaterflood", + "url": "https://github.com/frank1010111/pywaterflood", + "rel": "/software/repository/github/frank1010111/pywaterflood", + "avatar": "https://avatars.githubusercontent.com/u/4694479?v=4", + "description": "Capacitance resistance models for waterflood connectivity", "topics": [ - "data-science", - "data-visualization", - "flask", - "gui", - "interactive-visualizations", - "matplotlib", - "python" + "python", + "petroleum-engineering", + "reservoir", + "rust" ] }, { - "uid": "github/IonRepo/IonDiff", - "url": "https://github.com/IonRepo/IonDiff", - "rel": "/software/repository/github/IonRepo/IonDiff", - "avatar": "https://avatars.githubusercontent.com/u/128382389?v=4", - "description": "Unsupervised identification and analysis of ion-hopping events in solid state electrolytes.", + "uid": "github/frank1010111/bluebonnet", + "url": "https://github.com/frank1010111/bluebonnet", + "rel": "/software/repository/github/frank1010111/bluebonnet", + "avatar": "https://avatars.githubusercontent.com/u/4694479?v=4", + "description": "Scaling solutions for production analysis from unconventional oil and gas wells", "topics": [] }, { - "uid": "github/padster/pyNeuroTrace", - "url": "https://github.com/padster/pyNeuroTrace", - "rel": "/software/repository/github/padster/pyNeuroTrace", - "avatar": "https://avatars.githubusercontent.com/u/848804?v=4", - "description": "Python code for processing neural timeseries", - "topics": [ - "analytics", - "neuroscience", - "timeseries" - ] + "uid": "github/hcdenbakker/sepia", + "url": "https://github.com/hcdenbakker/sepia", + "rel": "/software/repository/github/hcdenbakker/sepia", + "avatar": "https://avatars.githubusercontent.com/u/13696884?v=4", + "description": "taxonomic classifier based on the kraken2 algorithms and more", + "topics": [] }, { - "uid": "github/leigh2/cetra", - "url": "https://github.com/leigh2/cetra", - "rel": "/software/repository/github/leigh2/cetra", - "avatar": "https://avatars.githubusercontent.com/u/7989763?v=4", - "description": "Cambridge Exoplanet Transit Recovery Algorithm", + "uid": "github/hcdenbakker/SalmID", + "url": "https://github.com/hcdenbakker/SalmID", + "rel": "/software/repository/github/hcdenbakker/SalmID", + "avatar": "https://avatars.githubusercontent.com/u/13696884?v=4", + "description": "Rapid confirmation of Salmonella spp. and subspp. from sequence data", "topics": [] }, { - "uid": "github/OpenEnergyPlatform/open-MaStR", - "url": "https://github.com/OpenEnergyPlatform/open-MaStR", - "rel": "/software/repository/github/OpenEnergyPlatform/open-MaStR", - "avatar": "https://avatars.githubusercontent.com/u/37101913?v=4", - "description": "A collaborative software to download the energy database Marktstammdatenregister (MaStR)", + "uid": "github/azizka/IUCNN", + "url": "https://github.com/IUCNN/IUCNN", + "rel": "/software/repository/github/azizka/IUCNN", + "avatar": "https://avatars.githubusercontent.com/u/90766685?v=4", + "description": " Train neural networks based on geographic species occurrences, environmental data and existing IUCN Red List assessments to predict the conservation status of \"Not Evaluated\" or \"Data Deficient\" species, for any taxon or geographic region of interest. https://iucnn.github.io/IUCNN/", "topics": [ - "open-energy-family", - "oep", - "marktstammdatenregister", - "python", - "energy", - "energy-data", - "dataset", - "datasets", - "solar" + "tensorflow", + "deep-learning", + "machine-learning", + "conservation-prioritization", + "conservation" ] }, { - "uid": "github/toddy15/medicalterms", - "url": "https://github.com/toddy15/medicalterms", - "rel": "/software/repository/github/toddy15/medicalterms", - "avatar": "https://avatars.githubusercontent.com/u/12176273?v=4", - "description": "German medical dictionary words", - "topics": [] + "uid": "github/ClapeyronThermo/GCIdentifier.jl", + "url": "https://github.com/ClapeyronThermo/GCIdentifier.jl", + "rel": "/software/repository/github/ClapeyronThermo/GCIdentifier.jl", + "avatar": "https://avatars.githubusercontent.com/u/122504744?v=4", + "description": "tools to perform group contribution (GC) identification, given the SMILES of a compound", + "topics": [ + "group-contribution", + "joback", + "smiles-strings", + "unifac" + ] }, { - "uid": "github/EC-Earth/ece2cmor3", - "url": "https://github.com/EC-Earth/ece2cmor3", - "rel": "/software/repository/github/EC-Earth/ece2cmor3", - "avatar": "https://avatars2.githubusercontent.com/u/39129421?v=4", - "description": "Post-processing and cmorization of ec-earth output", + "uid": "github/tahirulqamar/Deep-HPI-pred", + "url": "https://github.com/tahirulqamar/Deep-HPI-pred", + "rel": "/software/repository/github/tahirulqamar/Deep-HPI-pred", + "avatar": "https://avatars.githubusercontent.com/u/44988308?v=4", + "description": null, "topics": [] }, { - "uid": "github/mgm8/pyngham", - "url": "https://github.com/mgm8/pyngham", - "rel": "/software/repository/github/mgm8/pyngham", - "avatar": "https://avatars.githubusercontent.com/u/5316364?v=4", - "description": "Python library of the NGHam protocol", + "uid": "github/alawryaguila/multi-view-AE", + "url": "https://github.com/alawryaguila/multi-view-AE", + "rel": "/software/repository/github/alawryaguila/multi-view-AE", + "avatar": "https://avatars.githubusercontent.com/u/47194980?v=4", + "description": null, "topics": [] }, { - "uid": "github/LeonSong1995/gsMap", - "url": "https://github.com/LeonSong1995/gsMap", - "rel": "/software/repository/github/LeonSong1995/gsMap", - "avatar": "https://avatars.githubusercontent.com/u/49676857?v=4", - "description": "gsMap (genetically informed spatial mapping of cells for complex traits) integrates spatial transcriptomics (ST) data with genome-wide association study (GWAS) summary statistics to map cells to human complex traits, including diseases, in a spatially resolved manner.", + "uid": "github/kuadrat/data_slicer", + "url": "https://github.com/kuadrat/data-slicer", + "rel": "/software/repository/github/kuadrat/data_slicer", + "avatar": "https://avatars.githubusercontent.com/u/29949116?v=4", + "description": null, "topics": [] }, { - "uid": "github/martinghunt/ziplign", - "url": "https://github.com/martinghunt/ziplign", - "rel": "/software/repository/github/martinghunt/ziplign", - "avatar": "https://avatars.githubusercontent.com/u/4937411?v=4", - "description": "Simple-to-use interactive comparison of two bacterial genomes", - "topics": [] + "uid": "github/openneuropet/PET2BIDS", + "url": "https://github.com/openneuropet/PET2BIDS", + "rel": "/software/repository/github/openneuropet/PET2BIDS", + "avatar": "https://avatars.githubusercontent.com/u/81369350?v=4", + "description": "PET2BIDS helps you convert your PET data into BIDS! raw PET scanner files (e.g. ecat, dicom) and additional side files like .e.g excel sheets -- paper @JOSS https://doi.org/10.21105/joss.06067", + "topics": [ + "metadata", + "converter", + "json", + "bids" + ] + }, + { + "uid": "github/thieu1995/permetrics", + "url": "https://github.com/thieu1995/permetrics", + "rel": "/software/repository/github/thieu1995/permetrics", + "avatar": "https://avatars.githubusercontent.com/u/12763861?v=4", + "description": "Artificial intelligence (AI, ML, DL) performance metrics implemented in Python", + "topics": [ + "coefficient-of-determination", + "rmse", + "mae", + "performance-metrics", + "symmetric-mean-absolute-percentage", + "nash-sutcliffe-efficiency", + "willmott-index", + "relative-error", + "regression-methods", + "classification-report", + "clustering-evaluation", + "kling-gupta-efficiency", + "deviation-of-runoff-volume", + "evaluation-metrics", + "regression", + "classification" + ] }, { - "uid": "github/hcdenbakker/sepia", - "url": "https://github.com/hcdenbakker/sepia", - "rel": "/software/repository/github/hcdenbakker/sepia", - "avatar": "https://avatars.githubusercontent.com/u/13696884?v=4", - "description": "taxonomic classifier based on the kraken2 algorithms and more", + "uid": "github/AdrianA-T/cytomorph", + "url": "https://github.com/AdrianA-T/cytomorph", + "rel": "/software/repository/github/AdrianA-T/cytomorph", + "avatar": "https://avatars.githubusercontent.com/u/40856467?v=4", + "description": "Cytomorph is a open software based on the main general features of cytoneme-meditated gradient formation. This sfotware allows to upload different experimental data to study in silico the role of different biological parameters of this type of signaling. Cytomorph can also work as an in silico tester for other biological hypotheses that are difficult to validate experimentally. In addition, the software architecture is designed in different modules that make Cytomorph an adaptive computational tool in which new advances can be integrated.", "topics": [] }, { - "uid": "github/hcdenbakker/SalmID", - "url": "https://github.com/hcdenbakker/SalmID", - "rel": "/software/repository/github/hcdenbakker/SalmID", - "avatar": "https://avatars.githubusercontent.com/u/13696884?v=4", - "description": "Rapid confirmation of Salmonella spp. and subspp. from sequence data", - "topics": [] + "uid": "github/Zafiirah13/meercrab", + "url": "https://github.com/Zafiirah13/meercrab", + "rel": "/software/repository/github/Zafiirah13/meercrab", + "avatar": "https://avatars.githubusercontent.com/u/20860570?v=4", + "description": "MeerLICHT Classification of Real And Bogus using deep learning", + "topics": [ + "deep-learning", + "convolutional-neural-networks", + "optimization", + "transients" + ] }, { - "uid": "github/mwvgroup/pwv_kpno", - "url": "https://github.com/mwvgroup/pwv_kpno", - "rel": "/software/repository/github/mwvgroup/pwv_kpno", - "avatar": "https://avatars.githubusercontent.com/u/17320017?v=4", - "description": "GPS modeling of the H20 atmospheric transmission at user customizable sites", + "uid": "github/MoreiraLAB/or", + "url": "https://github.com/MoreiraLAB/or", + "rel": "/software/repository/github/MoreiraLAB/or", + "avatar": "https://avatars.githubusercontent.com/u/44231805?v=4", + "description": "Opiod Receptor Partners analysis code", "topics": [] }, { - "uid": "github/jorgefz/photoevolver", - "url": "https://github.com/jorgefz/photoevolver", - "rel": "/software/repository/github/jorgefz/photoevolver", - "avatar": "https://avatars.githubusercontent.com/u/55992591?v=4", - "description": "Planet evolver that takes into account energy-limited photoevaporation, the star's XUV history, and the planet's internal structure", + "uid": "github/MoreiraLAB/mensadb-open", + "url": "https://github.com/MoreiraLAB/mensadb-open", + "rel": "/software/repository/github/MoreiraLAB/mensadb-open", + "avatar": "https://avatars.githubusercontent.com/u/44231805?v=4", + "description": null, "topics": [] }, { - "uid": "github/sbailey/empca", - "url": "https://github.com/sbailey/empca", - "rel": "/software/repository/github/sbailey/empca", - "avatar": "https://avatars.githubusercontent.com/u/218471?v=4", - "description": "Principal Component Analysis (PCA) for Missing and/or Noisy Data", - "topics": [] + "uid": "github/mattpitkin/psrqpy", + "url": "https://github.com/mattpitkin/psrqpy", + "rel": "/software/repository/github/mattpitkin/psrqpy", + "avatar": "https://avatars.githubusercontent.com/u/1421092?v=4", + "description": "A python module to query the ATNF pulsar catalogue", + "topics": [ + "pulsar", + "atnf", + "catalogue", + "python" + ] }, { - "uid": "github/NoahSailer/FishLSS", - "url": "https://github.com/NoahSailer/FishLSS", - "rel": "/software/repository/github/NoahSailer/FishLSS", - "avatar": "https://avatars.githubusercontent.com/u/57497859?v=4", - "description": "Fisher forecasting code for Large Scale Structure surveys using Lagrangian Perturbation Theory.", - "topics": [] + "uid": "github/mattpitkin/lintegrate", + "url": "https://github.com/mattpitkin/lintegrate", + "rel": "/software/repository/github/mattpitkin/lintegrate", + "avatar": "https://avatars.githubusercontent.com/u/1421092?v=4", + "description": "A numerical integration routine that works for the natural logarithm of functions ", + "topics": [ + "integral", + "gsl", + "gsl-functions", + "python", + "wrapper" + ] }, { - "uid": "github/kushaltirumala/WaldoInSky", - "url": "https://github.com/kushaltirumala/WaldoInSky", - "rel": "/software/repository/github/kushaltirumala/WaldoInSky", - "avatar": "https://avatars.githubusercontent.com/u/10688982?v=4", - "description": "Code Repository for `Where is Waldo (and his friends)? A comparison of anomaly detection algorithms for time-domain astronomy`", - "topics": [] + "uid": "github/jeertmans/DiffeRT2d", + "url": "https://github.com/jeertmans/DiffeRT2d", + "rel": "/software/repository/github/jeertmans/DiffeRT2d", + "avatar": "https://avatars.githubusercontent.com/u/27275099?v=4", + "description": "2D Toolbox for Differentiable Ray Tracing", + "topics": [ + "2d", + "differentiable", + "raytracing", + "telecommunications" + ] }, { - "uid": "github/sidmohite/nimbus-astro", - "url": "https://github.com/sidmohite/nimbus-astro", - "rel": "/software/repository/github/sidmohite/nimbus-astro", - "avatar": "https://avatars.githubusercontent.com/u/43979903?v=4", - "description": "A Bayesian inference framework to constrain kilonova models.", + "uid": "github/CLIMADA-project/climada_python", + "url": "https://github.com/CLIMADA-project/climada_python", + "rel": "/software/repository/github/CLIMADA-project/climada_python", + "avatar": "https://avatars.githubusercontent.com/u/44439051?v=4", + "description": "Python (3.8+) version of CLIMADA", "topics": [] }, { - "uid": "github/21cmFAST/21cmFAST", - "url": "https://github.com/21cmfast/21cmFAST", - "rel": "/software/repository/github/21cmFAST/21cmFAST", - "avatar": "https://avatars1.githubusercontent.com/u/51762336?v=4", - "description": "Official repository for 21cmFAST: a code for generating fast simulations of the cosmological 21cm signal", + "uid": "github/antoinemarchal/ROHSA", + "url": "https://github.com/antoinemarchal/ROHSA", + "rel": "/software/repository/github/antoinemarchal/ROHSA", + "avatar": "https://avatars.githubusercontent.com/u/14968256?v=4", + "description": "Regularized Optimization for Hyper-Spectral Analysis", "topics": [] }, { - "uid": "github/wouterpeere/GHEtool", - "url": "https://github.com/wouterpeere/GHEtool", - "rel": "/software/repository/github/wouterpeere/GHEtool", - "avatar": "https://avatars.githubusercontent.com/u/52632307?v=4", - "description": "GHEtool is an open-source tool for borefield sizing and ground temperature evolution plotting.", + "uid": "github/phitterio/phitter-kernel", + "url": "https://github.com/phitter-core/phitter-kernel", + "rel": "/software/repository/github/phitterio/phitter-kernel", + "avatar": "https://avatars.githubusercontent.com/u/106888809?v=4", + "description": "Phitter is a python library for accurately fitting statistical distributions to datasets, offering intuitive usage, comprehensive visualization, and support for multiple distributions to enhance data analysis projects.", "topics": [ - "geothermal-energy", - "borefields", - "sizing", - "energy", - "storage", - "geothermal" + "operations-research", + "probability-distribution", + "probability-models", + "simulation" ] }, { - "uid": "github/WebSky-CITA/XGPaint.jl", - "url": "https://github.com/WebSky-CITA/XGPaint.jl", - "rel": "/software/repository/github/WebSky-CITA/XGPaint.jl", - "avatar": "https://avatars.githubusercontent.com/u/128504594?v=4", - "description": "fast forward simulations of extragalactic foregrounds", + "uid": "github/somefunAgba/NLSIG-COVID19Lab", + "url": "https://github.com/somefunAgba/NLSIG-COVID19Lab", + "rel": "/software/repository/github/somefunAgba/NLSIG-COVID19Lab", + "avatar": "https://avatars.githubusercontent.com/u/6755741?v=4", + "description": "A nlogistic-sigmoid playground for modelling the COVID-19 pandemic growth", "topics": [ - "cosmology", - "julia" + "covid-19", + "neural-networks", + "machine-learning", + "growth-process", + "epidemiology", + "logistic-regression", + "optimization", + "matlab", + "yir", + "deaths", + "infections", + "logistic-metrics", + "peak" ] }, { - "uid": "github/prioritizr/wdpar", - "url": "https://github.com/prioritizr/wdpar", - "rel": "/software/repository/github/prioritizr/wdpar", - "avatar": "https://avatars.githubusercontent.com/u/25472841?v=4", - "description": "Interface to the World Database on Protected Areas", + "uid": "github/nichollsh/AGNI", + "url": "https://github.com/nichollsh/AGNI", + "rel": "/software/repository/github/nichollsh/AGNI", + "avatar": "https://avatars.githubusercontent.com/u/32022679?v=4", + "description": "A 1D radiative-convective model for the atmospheres of hot (rocky) planets.", "topics": [ - "r", - "conservation", - "data", - "spatial", - "database", - "biodiversity", - "protected-areas", - "cran", - "r-package", - "rstats" + "atmosphere-model", + "convection", + "exoplanets", + "physics", + "radiation", + "fortran", + "julia", + "planetary-science", + "radiative-transfer", + "nonlinear-optimization", + "optimization", + "thermodynamics", + "atmosphere", + "jwst", + "magma" ] }, { - "uid": "github/TNOCS/csWeb", - "url": "https://github.com/TNOCS/csWeb", - "rel": "/software/repository/github/TNOCS/csWeb", - "avatar": "https://avatars0.githubusercontent.com/u/7793389?v=4", - "description": "csWeb, short for common sense Web, is a userfriendly web application for showing (GIS) data on a map. It allows you to apply multiple filters to filter your data, and to style it, so you can immediately see what's important.", + "uid": "github/GalletFlorian/TATOO", + "url": "https://github.com/GalletFlorian/TATOO", + "rel": "/software/repository/github/GalletFlorian/TATOO", + "avatar": "https://avatars.githubusercontent.com/u/53513832?v=4", + "description": "Tidal-chronology Age TOOl", "topics": [] }, { - "uid": "github/gnuradio/gnuradio", - "url": "https://github.com/gnuradio/gnuradio", - "rel": "/software/repository/github/gnuradio/gnuradio", - "avatar": "https://avatars.githubusercontent.com/u/1278659?v=4", - "description": "GNU Radio \u2013 the Free and Open Software Radio Ecosystem", + "uid": "github/arvados/arvados", + "url": "https://github.com/arvados/arvados", + "rel": "/software/repository/github/arvados/arvados", + "avatar": "https://avatars.githubusercontent.com/u/2304206?v=4", + "description": "An open source platform for managing and analyzing biomedical big data", "topics": [ - "sdr", - "dsp", - "wireless", - "cybersecurity", - "c-plus-plus", + "arvados", + "ruby", "python", - "gnu", - "radio", - "gnuradio", - "hacktoberfest" + "go", + "docker", + "cluster", + "cloud", + "cwl", + "bigdata", + "bioinformatics", + "genomics", + "workflow", + "aws", + "gcp", + "azure", + "workflow-engine" ] }, { - "uid": "github/reggiebernardo/PTAfast", - "url": "https://github.com/reggiebernardo/PTAfast", - "rel": "/software/repository/github/reggiebernardo/PTAfast", - "avatar": "https://avatars.githubusercontent.com/u/44859376?v=4", - "description": "Fast code for PTA correlations from SGWB", + "uid": "github/mwess/miit", + "url": "https://github.com/mwess/miit", + "rel": "/software/repository/github/mwess/miit", + "avatar": "https://avatars.githubusercontent.com/u/9482649?v=4", + "description": "Repository for the Multi-omics Imaging Integration Toolset.", "topics": [] }, { - "uid": "github/gully/blase", - "url": "https://github.com/gully/blase", - "rel": "/software/repository/github/gully/blase", - "avatar": "https://avatars.githubusercontent.com/u/860227?v=4", - "description": "Interpretable Machine Learning for astronomical spectroscopy in PyTorch and JAX", + "uid": "github/mwess/GreedyFHist", + "url": "https://github.com/mwess/GreedyFHist", + "rel": "/software/repository/github/mwess/GreedyFHist", + "avatar": "https://avatars.githubusercontent.com/u/9482649?v=4", + "description": "Registration of stained histology.", + "topics": [] + }, + { + "uid": "github/AStcherbinine/omegapy", + "url": "https://github.com/AStcherbinine/omegapy", + "rel": "/software/repository/github/AStcherbinine/omegapy", + "avatar": "https://avatars.githubusercontent.com/u/31817302?v=4", + "description": "Python tools for OMEGA/MEx observation data (importation/correction/display).", "topics": [ "astronomy", - "interpretable-machine-learning", - "machine-learning", - "spectroscopy" + "physics", + "python3", + "planetary-science" ] }, { - "uid": "github/AgatheSenellart/MultiVae", - "url": "https://github.com/AgatheSenellart/MultiVae", - "rel": "/software/repository/github/AgatheSenellart/MultiVae", - "avatar": "https://avatars.githubusercontent.com/u/60698682?v=4", - "description": "Unifying Multimodal Variational Autoencoders (VAEs) in Pytorch", - "topics": [] + "uid": "github/rickhelmus/patRoon", + "url": "https://github.com/rickhelmus/patRoon", + "rel": "/software/repository/github/rickhelmus/patRoon", + "avatar": "https://avatars.githubusercontent.com/u/37015911?v=4", + "description": "Workflow solutions for mass-spectrometry based non-target analysis.", + "topics": [ + "mass-spectrometry", + "r", + "non-target" + ] }, { - "uid": "github/nickk124/RCR", - "url": "https://github.com/nickk124/RCR", - "rel": "/software/repository/github/nickk124/RCR", - "avatar": "https://avatars.githubusercontent.com/u/37184532?v=4", - "description": "Robust Chauvenet Rejection: RCR is advanced, but easy to use, outlier rejection.", + "uid": "github/AMICI-dev/AMICI", + "url": "https://github.com/AMICI-dev/AMICI", + "rel": "/software/repository/github/AMICI-dev/AMICI", + "avatar": "https://avatars.githubusercontent.com/u/68919097?v=4", + "description": "Advanced Multilanguage Interface to CVODES and IDAS", "topics": [ - "outlier-rejection", - "outlier-detection", - "regression", - "robust", - "robust-statistics" + "differentialequations", + "sensitivities", + "simulation", + "adjoint-sensitivities", + "forward-sensitivities", + "sbml", + "systemsbiology", + "cvode", + "python", + "kinetic-modeling", + "mechanistic-models", + "sensitivity-analysis", + "cvodes", + "idas", + "pysb", + "petab", + "ode", + "parameter-estimation", + "hacktoberfest", + "modeling" ] }, { - "uid": "github/abs-tudelft/variant-calling-at-scale", - "url": "https://github.com/abs-tudelft/variant-calling-at-scale", - "rel": "/software/repository/github/abs-tudelft/variant-calling-at-scale", - "avatar": "https://avatars.githubusercontent.com/u/49724060?v=4", - "description": "Scalable and Efficient Variant Calling on Apache Spark cluster", + "uid": "github/dokester/BayesicFitting", + "url": "https://github.com/dokester/BayesicFitting", + "rel": "/software/repository/github/dokester/BayesicFitting", + "avatar": "https://avatars.githubusercontent.com/u/10372360?v=4", + "description": "Bayesian fitting package", "topics": [ - "gcp-dataproc-cluster", - "bwa", - "duplicates-removal", - "variant-calling", - "deepvariant", - "minimap2" + "fitters", + "data-analysis", + "modeling", + "bayesian", + "evidence", + "calibration-toolbox", + "jupyter-notebook", + "history", + "java", + "hope", + "nested-sampling", + "test-harness", + "pypi", + "exercise" ] }, { - "uid": "github/torluca/morphofit", - "url": "https://github.com/torluca/morphofit", - "rel": "/software/repository/github/torluca/morphofit", - "avatar": "https://avatars.githubusercontent.com/u/38278229?v=4", - "description": "A Python package for the morphological analysis of galaxies (Tortorelli & Mercurio 2023).", + "uid": "github/MilesCranmer/PySR", + "url": "https://github.com/MilesCranmer/PySR", + "rel": "/software/repository/github/MilesCranmer/PySR", + "avatar": "https://avatars.githubusercontent.com/u/7593028?v=4", + "description": "High-Performance Symbolic Regression in Python and Julia", + "topics": [ + "symbolic-regression", + "machine-learning", + "python", + "julia", + "genetic-algorithm", + "automl", + "interpretable-ml", + "data-science", + "explainable-ai", + "scikit-learn", + "symbolic", + "algorithm", + "distributed-systems", + "evolutionary-algorithms", + "equation-discovery" + ] + }, + { + "uid": "github/logan-pearce/lofti_gaia", + "url": "https://github.com/logan-pearce/lofti_gaia", + "rel": "/software/repository/github/logan-pearce/lofti_gaia", + "avatar": "https://avatars.githubusercontent.com/u/27641243?v=4", + "description": "Python package for orbit fitting with Gaia astrometry", "topics": [] }, { - "uid": "github/pkugyf/MST", - "url": "https://github.com/pkugyf/MST", - "rel": "/software/repository/github/pkugyf/MST", - "avatar": "https://avatars.githubusercontent.com/u/31844573?v=4", - "description": null, + "uid": "github/hansenjohnson/WhaleMap", + "url": "https://github.com/hansenjohnson/WhaleMap", + "rel": "/software/repository/github/hansenjohnson/WhaleMap", + "avatar": "https://avatars.githubusercontent.com/u/24778637?v=4", + "description": "Collate and visualize whale survey results in the NW Atlantic", "topics": [] }, { - "uid": "github/miracum/ahd2fhir", - "url": "https://github.com/miracum/ahd2fhir", - "rel": "/software/repository/github/miracum/ahd2fhir", - "avatar": "https://avatars.githubusercontent.com/u/25475545?v=4", - "description": "A REST service for mapping text analysis results from Averbis Health Discovery to FHIR resources.", + "uid": "github/mlujnie/simple", + "url": "https://github.com/mlujnie/simple", + "rel": "/software/repository/github/mlujnie/simple", + "avatar": "https://avatars.githubusercontent.com/u/44762816?v=4", + "description": "Simple Intensity Map Producer for Line Emission (public code)", "topics": [] }, { - "uid": "github/mbonav/Exo_DMC", - "url": "https://github.com/mbonav/Exo_DMC", - "rel": "/software/repository/github/mbonav/Exo_DMC", - "avatar": "https://avatars.githubusercontent.com/u/34315578?v=4", - "description": "Exoplanet Detection Map Calculator ", + "uid": "github/Collab4exaNBody/exaDEM", + "url": "https://github.com/Collab4exaNBody/exaDEM", + "rel": "/software/repository/github/Collab4exaNBody/exaDEM", + "avatar": "https://avatars.githubusercontent.com/u/138599032?v=4", + "description": "ExaDEM is a HPC software solution in the field of computational simulations. ExaDEM is built on top of exaNBody platform.", + "topics": [ + "dem", + "gpu", + "granular-media", + "hpc", + "mpi" + ] + }, + { + "uid": "github/SimVascular/svZeroDSolver", + "url": "https://github.com/SimVascular/svZeroDSolver", + "rel": "/software/repository/github/SimVascular/svZeroDSolver", + "avatar": "https://avatars.githubusercontent.com/u/13788322?v=4", + "description": "A C++ lumped-parameter solver for blood flow and pressure in hemodynamic networks", "topics": [] }, { - "uid": "github/luxsrc/gray", - "url": "https://github.com/luxsrc/gray", - "rel": "/software/repository/github/luxsrc/gray", - "avatar": "https://avatars.githubusercontent.com/u/33961050?v=4", - "description": "A general relativistic ray tracing code based on lux", + "uid": "github/lauralwatkins/cjam", + "url": "https://github.com/lauralwatkins/cjam", + "rel": "/software/repository/github/lauralwatkins/cjam", + "avatar": "https://avatars.githubusercontent.com/u/1694844?v=4", + "description": "CJAM : Jeans Anisotropic MGE modelling code written in C from Watkins et al. 2013, MNRAS, 436, 2598", "topics": [] }, { - "uid": "github/lanl/CosmicEmu", - "url": "https://github.com/lanl/CosmicEmu", - "rel": "/software/repository/github/lanl/CosmicEmu", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Fast predictions for the matter power spectrum.", + "uid": "github/esa/NIDN", + "url": "https://github.com/esa/NIDN", + "rel": "/software/repository/github/esa/NIDN", + "avatar": "https://avatars.githubusercontent.com/u/3287599?v=4", + "description": "Neural Inverse Design of Nanostructures", "topics": [] }, { - "uid": "github/lanl/scico", - "url": "https://github.com/lanl/scico", - "rel": "/software/repository/github/lanl/scico", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Scientific Computational Imaging COde", + "uid": "github/esa/polyhedral-gravity-model", + "url": "https://github.com/esa/polyhedral-gravity-model", + "rel": "/software/repository/github/esa/polyhedral-gravity-model", + "avatar": "https://avatars.githubusercontent.com/u/3287599?v=4", + "description": "Implementation of a polyhedral gravity model in C++17 with a Python Binding", "topics": [ - "computational-imaging", - "inverse-problems", - "optimization", - "admm", - "fista", - "total-variation", - "plug-and-play-priors", - "jax", - "convex-optimization", - "proximal-algorithms", - "proximal-operators" + "cpp17", + "gravity", + "polyhedral-model", + "python" ] }, { - "uid": "github/lanl/GLUE", - "url": "https://github.com/lanl/GLUE", - "rel": "/software/repository/github/lanl/GLUE", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Generic Learning User Enablement Code", - "topics": [] - }, - { - "uid": "github/lanl/PyBNF", - "url": "https://github.com/lanl/PyBNF", - "rel": "/software/repository/github/lanl/PyBNF", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "An application for parameterization of biological models available in SBML and BNGL formats. Features include parallelization, metaheuristic optimization algorithms, and an adaptive Markov chain Monte Carlo (MCMC) sampling algorithm.", + "uid": "github/esa/pagmo2-paper", + "url": "https://github.com/esa/pagmo2-paper", + "rel": "/software/repository/github/esa/pagmo2-paper", + "avatar": "https://avatars0.githubusercontent.com/u/3287599?v=4", + "description": "paper for JOSS on pagmo and pygmo", "topics": [] }, { - "uid": "github/lanl/spiner", - "url": "https://github.com/lanl/spiner", - "rel": "/software/repository/github/lanl/spiner", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Performance portable routines for generic, tabulated, multi-dimensional data", + "uid": "github/cbio-astar-tools/GeneCloudOmics", + "url": "https://github.com/cbio-astar-tools/GeneCloudOmics", + "rel": "/software/repository/github/cbio-astar-tools/GeneCloudOmics", + "avatar": "https://avatars.githubusercontent.com/u/73512938?v=4", + "description": "A Biostatistical tool for Transcriptomics Analysis", "topics": [] }, { - "uid": "github/lanl/swiftbat_python", - "url": "https://github.com/lanl/swiftbat_python", - "rel": "/software/repository/github/lanl/swiftbat_python", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Utilities for BAT instrument on the Neil Gehrels Swift Observatory satellite", + "uid": "github/fforster/delight", + "url": "https://github.com/fforster/DELIGHT", + "rel": "/software/repository/github/fforster/delight", + "avatar": "https://avatars.githubusercontent.com/u/5090828?v=4", + "description": "Deep Learning Identification of Galaxy Hosts in Transients", "topics": [] }, { - "uid": "github/lanl/singularity-eos", - "url": "https://github.com/lanl/singularity-eos", - "rel": "/software/repository/github/lanl/singularity-eos", - "avatar": "https://avatars.githubusercontent.com/u/585305?v=4", - "description": "Performance portable equations of state and mixed cell closures", + "uid": "github/ERPI-UL/HELP-VRclient", + "url": "https://github.com/ERPI-UL/HELP-VRclient", + "rel": "/software/repository/github/ERPI-UL/HELP-VRclient", + "avatar": "https://avatars.githubusercontent.com/u/113673811?v=4", + "description": "Hybrid Extended Learning Platform (HELP) - VR client for Meta Quest", "topics": [] }, { - "uid": "github/tum-esm/pyra", - "url": "https://github.com/tum-esm/pyra", - "rel": "/software/repository/github/tum-esm/pyra", - "avatar": "https://avatars.githubusercontent.com/u/89810129?v=4", - "description": "Pyra: Automated EM27/SUN Greenhouse Gas Measurement Software", + "uid": "github/cbrnr/sigviewer", + "url": "https://github.com/cbrnr/sigviewer", + "rel": "/software/repository/github/cbrnr/sigviewer", + "avatar": "https://avatars.githubusercontent.com/u/4377312?v=4", + "description": "SigViewer is a viewing application for biosignals.", "topics": [ - "bruker", - "opus", - "python", - "tauri", - "camtracker", - "em27", - "cli", - "click", - "fabric", - "docusaurus", - "poetry", - "tailwindcss", - "typescript", - "climate", - "spectrometry", - "autonomous", - "sensor", - "emissions", - "monitoring", - "mypy" + "eeg", + "visualization" ] }, { - "uid": "github/tum-esm/ivy", - "url": "https://github.com/tum-esm/ivy", - "rel": "/software/repository/github/tum-esm/ivy", - "avatar": "https://avatars.githubusercontent.com/u/89810129?v=4", - "description": "a python boilerplate for an IoT node data acqusition system (DAS)", + "uid": "github/obreschkow/dftools", + "url": "https://github.com/obreschkow/dftools", + "rel": "/software/repository/github/obreschkow/dftools", + "avatar": "https://avatars.githubusercontent.com/u/28353939?v=4", + "description": null, "topics": [] }, { - "uid": "github/adbar/htmldate", - "url": "https://github.com/adbar/htmldate", - "rel": "/software/repository/github/adbar/htmldate", - "avatar": "https://avatars0.githubusercontent.com/u/2125866?v=4", - "description": "Fast and robust date extraction from web pages, from the command-line or within Python", + "uid": "github/jendelel/PrankWebApp", + "url": "https://github.com/jendelel/PrankWebApp", + "rel": "/software/repository/github/jendelel/PrankWebApp", + "avatar": "https://avatars0.githubusercontent.com/u/16251857?v=4", + "description": "Web application for protein-ligand binding sites analysis and visualization", "topics": [ - "metadata-extraction", - "date-parser", - "html-parsing", - "entity-extraction", - "natural-language-processing", - "nlp", - "web-scraping", - "webscraping", - "date", - "datetime", - "metadata", - "information-extraction" + "protein-ligand-interactions", + "web-application", + "protein-homology", + "visualization", + "protein", + "conservation", + "web", + "webapp", + "ligand", + "protein-structure", + "protein-sequence", + "pdb", + "conservation-scores", + "analyses" ] }, { - "uid": "github/cajohare/NeutrinoFog", - "url": "https://github.com/cajohare/NeutrinoFog", - "rel": "/software/repository/github/cajohare/NeutrinoFog", - "avatar": "https://avatars.githubusercontent.com/u/43500212?v=4", - "description": "Neutrino fog and floor for direct dark matter searches", - "topics": [] + "uid": "github/ptaconet/modisfast", + "url": "https://github.com/ptaconet/modisfast", + "rel": "/software/repository/github/ptaconet/modisfast", + "avatar": "https://avatars.githubusercontent.com/u/15834351?v=4", + "description": "Fast and efficient access to MODIS, VIIRS and GPM Earth Observation data with R ", + "topics": [ + "r", + "data-cube", + "opendap", + "environmental-data", + "earth-science-data", + "gpm", + "land", + "modis", + "viirs", + "nasa", + "precipitation-data", + "temperature-data", + "vegetation-data" + ] }, { - "uid": "github/yapenzhang/excalibuhr", - "url": "https://github.com/yapenzhang/excalibuhr", - "rel": "/software/repository/github/yapenzhang/excalibuhr", - "avatar": "https://avatars.githubusercontent.com/u/45408119?v=4", - "description": "A pipeline for high-resolution spectral data reduction", + "uid": "github/ptaconet/bdd_rntaaf", + "url": "https://github.com/ptaconet/bdd_rntaaf", + "rel": "/software/repository/github/ptaconet/bdd_rntaaf", + "avatar": "https://avatars.githubusercontent.com/u/15834351?v=4", + "description": "Codes SQL de la premi\u00e8re base de donn\u00e9es relationelle de la R\u00e9serve Naturelle Nationale des Terres australes fran\u00e7aises", "topics": [] }, { - "uid": "github/yatisht/usher", - "url": "https://github.com/yatisht/usher", - "rel": "/software/repository/github/yatisht/usher", - "avatar": "https://avatars.githubusercontent.com/u/34664884?v=4", - "description": "Ultrafast Sample Placement on Existing Trees", + "uid": "github/CastillonMiguel/phasefieldx", + "url": "https://github.com/CastillonMiguel/phasefieldx", + "rel": "/software/repository/github/CastillonMiguel/phasefieldx", + "avatar": "https://avatars.githubusercontent.com/u/103516477?v=4", + "description": "An Open-Source Framework for Advanced Phase-Field Simulations", "topics": [ - "sars-cov-2", - "phylogenetics", - "maximum-parsimony", - "usher", - "genome-browser", - "phylogenetic-placement" + "fatigue", + "fem", + "finite-elements", + "fracture", + "fracture-mechanics", + "phase-field", + "phase-field-fracture", + "solidification" ] }, { - "uid": "github/mrtommyb/ktransit", - "url": "https://github.com/mrtommyb/ktransit", - "rel": "/software/repository/github/mrtommyb/ktransit", - "avatar": "https://avatars.githubusercontent.com/u/1900573?v=4", - "description": "A simple exoplanet transit modeling tool in python", + "uid": "github/genostats/LowKi", + "url": "https://github.com/genostats/LowKi", + "rel": "/software/repository/github/genostats/LowKi", + "avatar": "https://avatars.githubusercontent.com/u/22770001?v=4", + "description": null, "topics": [] }, { - "uid": "github/willvousden/ptemcee", - "url": "https://github.com/willvousden/ptemcee", - "rel": "/software/repository/github/willvousden/ptemcee", - "avatar": "https://avatars.githubusercontent.com/u/152388?v=4", - "description": "A parallel-tempered version of emcee.", + "uid": "github/vincentvaneylen/k2photometry", + "url": "https://github.com/vincentvaneylen/k2photometry", + "rel": "/software/repository/github/vincentvaneylen/k2photometry", + "avatar": "https://avatars.githubusercontent.com/u/11032500?v=4", + "description": "Read, reduce and detrend K2 photometry and search for transiting planets", "topics": [] }, { - "uid": "github/Crompulence/cpl-library", - "url": "https://github.com/Crompulence/cpl-library", - "rel": "/software/repository/github/Crompulence/cpl-library", - "avatar": "https://avatars.githubusercontent.com/u/13557676?v=4", - "description": null, + "uid": "github/drupke/ifsred", + "url": "https://github.com/drupke/ifsred", + "rel": "/software/repository/github/drupke/ifsred", + "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", + "description": "Astronomy software tools for reducing data from an integral field spectrograph (IFS).", "topics": [] }, { - "uid": "github/IftachSadeh/ANNZ", - "url": "https://github.com/IftachSadeh/ANNZ", - "rel": "/software/repository/github/IftachSadeh/ANNZ", - "avatar": "https://avatars.githubusercontent.com/u/7607021?v=4", - "description": "Machine learning methods for astrophysics (photometric redshift and PDF estimation, star/galaxy classification etc.)", + "uid": "github/drupke/questfit", + "url": "https://github.com/drupke/questfit", + "rel": "/software/repository/github/drupke/questfit", + "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", + "description": "fitter for mid-infrared galaxy spectra", "topics": [] }, { - "uid": "github/LauraHerold/pinc", - "url": "https://github.com/LauraHerold/pinc", - "rel": "/software/repository/github/LauraHerold/pinc", - "avatar": "https://avatars.githubusercontent.com/u/28920885?v=4", - "description": "Simple simulated-annealing minimization for computing profile likelihoods in cosmology", + "uid": "github/drupke/ifsfit", + "url": "https://github.com/drupke/ifsfit", + "rel": "/software/repository/github/drupke/ifsfit", + "avatar": "https://avatars.githubusercontent.com/u/5816744?v=4", + "description": "Astronomy spectral fitting software optimized for integral field spectroscopy (IFS).", "topics": [] }, { - "uid": "github/cmayer/BaitFisher-package", - "url": "https://github.com/cmayer/BaitFisher-package", - "rel": "/software/repository/github/cmayer/BaitFisher-package", - "avatar": "https://avatars.githubusercontent.com/u/2019744?v=4", - "description": "The BaitFisher-package is a software package for designing hybrid enrichment probes. For more information see:", + "uid": "github/carlosborca/CrystaLattE", + "url": "https://github.com/carlosborca/CrystaLattE", + "rel": "/software/repository/github/carlosborca/CrystaLattE", + "avatar": "https://avatars2.githubusercontent.com/u/23508182?v=4", + "description": "Set of scripts to automate the calculation of crystal lattice energies.", "topics": [] }, { - "uid": "github/HCGB-IGTP/spaTyper", - "url": "https://github.com/HCGB-IGTP/spaTyper", - "rel": "/software/repository/github/HCGB-IGTP/spaTyper", - "avatar": "https://avatars.githubusercontent.com/u/56880433?v=4", - "description": "Computational method for finding spa types.", + "uid": "github/dirostri/CREPE", + "url": "https://github.com/dirostri/CREPE", + "rel": "/software/repository/github/dirostri/CREPE", + "avatar": "https://avatars.githubusercontent.com/u/46599183?v=4", + "description": "GitHub Repository for CREPE: A tool for Transcription Factor Cataloguing", "topics": [] }, { - "uid": "github/HCGB-IGTP/XICRA", - "url": "https://github.com/HCGB-IGTP/XICRA", - "rel": "/software/repository/github/HCGB-IGTP/XICRA", - "avatar": "https://avatars.githubusercontent.com/u/56880433?v=4", - "description": "Small RNAseq pipeline for paired-end reads", - "topics": [ - "pipeline", - "mirna", - "smallrna-seq", - "python" - ] - }, - { - "uid": "github/cog-imperial/suspect", - "url": "https://github.com/cog-imperial/suspect", - "rel": "/software/repository/github/cog-imperial/suspect", - "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", - "description": "Special Structure Detection for Pyomo", + "uid": "github/AdmiralenOla/Scoary", + "url": "https://github.com/AdmiralenOla/Scoary", + "rel": "/software/repository/github/AdmiralenOla/Scoary", + "avatar": "https://avatars.githubusercontent.com/u/14874487?v=4", + "description": "Pan-genome wide association studies", "topics": [ - "mathematical-programming", - "mixed-integer-optimization", - "nonlinear-optimization", - "pyomo" + "gene-presence-absence", + "gwas", + "pan-genome", + "bacteria", + "genomics" ] }, { - "uid": "github/cog-imperial/galini", - "url": "https://github.com/cog-imperial/galini", - "rel": "/software/repository/github/cog-imperial/galini", - "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", - "description": "An extensible MINLP solver", + "uid": "github/gogetdata/ggd-utils", + "url": "https://github.com/gogetdata/ggd-utils", + "rel": "/software/repository/github/gogetdata/ggd-utils", + "avatar": "https://avatars.githubusercontent.com/u/18429455?v=4", + "description": "programs for use in ggd", "topics": [] }, { - "uid": "github/cog-imperial/GPdoemd", - "url": "https://github.com/cog-imperial/GPdoemd", - "rel": "/software/repository/github/cog-imperial/GPdoemd", - "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", - "description": "Design of experiments for model discrimination using Gaussian process surrogate models", - "topics": [] + "uid": "github/PixelgenTechnologies/pixelator", + "url": "https://github.com/PixelgenTechnologies/pixelator", + "rel": "/software/repository/github/PixelgenTechnologies/pixelator", + "avatar": "https://avatars.githubusercontent.com/u/73003367?v=4", + "description": "A command-line tool and library to process and analyze sequencing data from Molecular Pixelation (MPX) assays.", + "topics": [ + "molecular-pixelation", + "pixelgen-technologies", + "protein", + "proteomics", + "single-cell", + "single-cell-omics", + "spatial" + ] }, { - "uid": "github/cog-imperial/entmoot", - "url": "https://github.com/cog-imperial/entmoot", - "rel": "/software/repository/github/cog-imperial/entmoot", - "avatar": "https://avatars.githubusercontent.com/u/30658188?v=4", - "description": null, - "topics": [] + "uid": "github/nevrome/bleiglas", + "url": "https://github.com/nevrome/bleiglas", + "rel": "/software/repository/github/nevrome/bleiglas", + "avatar": "https://avatars.githubusercontent.com/u/10789038?v=4", + "description": "R Package - Spatiotemporal Data Interpolation and Visualisation based on 3D Tessellation", + "topics": [ + "r", + "tessellation", + "3d", + "voronoi" + ] }, { - "uid": "github/elizakempton/Exo_Transmit", - "url": "https://github.com/elizakempton/Exo_Transmit", - "rel": "/software/repository/github/elizakempton/Exo_Transmit", - "avatar": "https://avatars.githubusercontent.com/u/7716539?v=4", - "description": "Exo-Transmit radiative transfer code for calculating exoplanet transmission spectra", - "topics": [] + "uid": "github/SKA-INAF/caesar-rest", + "url": "https://github.com/SKA-INAF/caesar-rest", + "rel": "/software/repository/github/SKA-INAF/caesar-rest", + "avatar": "https://avatars.githubusercontent.com/u/32369098?v=4", + "description": "Rest API for caesar source finder application", + "topics": [ + "rest-api", + "flask", + "celery", + "image-processing", + "radio-astronomy", + "caesar" + ] }, { - "uid": "github/uit-cosmo/blobmodel", - "url": "https://github.com/uit-cosmo/blobmodel", - "rel": "/software/repository/github/uit-cosmo/blobmodel", - "avatar": "https://avatars.githubusercontent.com/u/76398964?v=4", - "description": "Model of propagating blobs in 1D and 2D", + "uid": "github/mathLab/PINA", + "url": "https://github.com/mathLab/PINA", + "rel": "/software/repository/github/mathLab/PINA", + "avatar": "https://avatars.githubusercontent.com/u/14195552?v=4", + "description": "Physics-Informed Neural networks for Advanced modeling", "topics": [ - "fusion", - "modelling-tool", - "stochastic-process", - "turbulence", - "plasma", + "physics-informed-neural-networks", + "modeling", + "machine-learning", + "deep-learning", "python", - "science" + "pytorch", + "differential-equations", + "neural-network", + "ode", + "pde", + "physics-informed", + "hacktoberfest", + "lightining", + "pinn" ] }, { - "uid": "github/samhforbes/PupillometryR", - "url": "https://github.com/samhforbes/PupillometryR", - "rel": "/software/repository/github/samhforbes/PupillometryR", - "avatar": "https://avatars3.githubusercontent.com/u/18288098?v=4", - "description": "An R package for preparing and analysing pupillometry data", + "uid": "github/wtsi-hpag/HiLine", + "url": "https://github.com/wtsi-hpag/HiLine", + "rel": "/software/repository/github/wtsi-hpag/HiLine", + "avatar": "https://avatars.githubusercontent.com/u/33829550?v=4", + "description": "HiC alignment and classification pipeline", "topics": [] }, { - "uid": "github/laurazara/IgIDivA", - "url": "https://github.com/laurazara/IgIDivA", - "rel": "/software/repository/github/laurazara/IgIDivA", - "avatar": "https://avatars.githubusercontent.com/u/55143969?v=4", + "uid": "github/maximewack/viroCapt", + "url": "https://github.com/MaximeWack/viroCapt", + "rel": "/software/repository/github/maximewack/viroCapt", + "avatar": "https://avatars.githubusercontent.com/u/2104109?v=4", "description": null, "topics": [] }, { - "uid": "github/gilestrolab/ethoscope", - "url": "https://github.com/gilestrolab/ethoscope", - "rel": "/software/repository/github/gilestrolab/ethoscope", - "avatar": "https://avatars.githubusercontent.com/u/5263770?v=4", - "description": "a platform from monitoring animal behaviour in real time from a raspberry pi", + "uid": "github/alejandroaviles/fkpt", + "url": "https://github.com/alejandroaviles/fkpt", + "rel": "/software/repository/github/alejandroaviles/fkpt", + "avatar": "https://avatars.githubusercontent.com/u/10519363?v=4", + "description": "Perturbation theory with \"fk\"-Kernels", "topics": [] }, { - "uid": "github/gilestrolab/pySolo", - "url": "https://github.com/gilestrolab/pySolo", - "rel": "/software/repository/github/gilestrolab/pySolo", - "avatar": "https://avatars.githubusercontent.com/u/5263770?v=4", - "description": "A software for sleep analysis in Drosophila", + "uid": "github/fannyhb/fargene", + "url": "https://github.com/fannyhb/fargene", + "rel": "/software/repository/github/fannyhb/fargene", + "avatar": "https://avatars.githubusercontent.com/u/25587784?v=4", + "description": null, "topics": [] }, { - "uid": "github/rafaeleufrasio/lightning", - "url": "https://github.com/rafaeleufrasio/lightning", - "rel": "/software/repository/github/rafaeleufrasio/lightning", - "avatar": "https://avatars.githubusercontent.com/u/15216531?v=4", - "description": "Lightning SED Fitting Package", + "uid": "github/chklovski/CheckM2", + "url": "https://github.com/chklovski/CheckM2", + "rel": "/software/repository/github/chklovski/CheckM2", + "avatar": "https://avatars.githubusercontent.com/u/54562698?v=4", + "description": "Assessing the quality of metagenome-derived genome bins using machine learning", "topics": [] }, { - "uid": "github/BiodataAnalysisGroup/UMIc", - "url": "https://github.com/BiodataAnalysisGroup/UMIc", - "rel": "/software/repository/github/BiodataAnalysisGroup/UMIc", - "avatar": "https://avatars.githubusercontent.com/u/9251685?v=4", - "description": "A framework implementing a method for UMI deduplication and reads correction.", + "uid": "github/mamartinod/grip-nulling", + "url": "https://github.com/mamartinod/grip-nulling", + "rel": "/software/repository/github/mamartinod/grip-nulling", + "avatar": "https://avatars.githubusercontent.com/u/4233805?v=4", + "description": "Nulling Data Processing Software", "topics": [] }, { - "uid": "github/BiodataAnalysisGroup/kmerAnalyzer", - "url": "https://github.com/BiodataAnalysisGroup/kmerAnalyzer", - "rel": "/software/repository/github/BiodataAnalysisGroup/kmerAnalyzer", - "avatar": "https://avatars.githubusercontent.com/u/9251685?v=4", - "description": "An alignment-free method capable of processing and counting k-mers in a reasonable time, while evaluating multiple values of the k parameter concurrently.", + "uid": "github/deeprob/ThioesteraseEnzymeSpecificity", + "url": "https://github.com/deeprob/ThioesteraseEnzymeSpecificity", + "rel": "/software/repository/github/deeprob/ThioesteraseEnzymeSpecificity", + "avatar": "https://avatars.githubusercontent.com/u/42780724?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/ladsantos/p-winds", + "url": "https://github.com/ladsantos/p-winds", + "rel": "/software/repository/github/ladsantos/p-winds", + "avatar": "https://avatars.githubusercontent.com/u/2818188?v=4", + "description": "Python implementation of Parker wind models for exoplanet atmospheres", "topics": [ - "k-mers", - "unsupervised-learning", - "phylogenetics", - "feature-selection", - "sars-cov-2" + "astronomy", + "exoplanet", + "exoplanet-atmospheres", + "atmosphere", + "astrophysics" ] }, { - "uid": "github/linksmart/thing-directory", - "url": "https://github.com/linksmart/thing-directory", - "rel": "/software/repository/github/linksmart/thing-directory", - "avatar": "https://avatars.githubusercontent.com/u/41904448?v=4", - "description": "Directory of Web of Things (WoT) Thing Descriptions", + "uid": "github/ladsantos/flatstar", + "url": "https://github.com/ladsantos/flatstar", + "rel": "/software/repository/github/ladsantos/flatstar", + "avatar": "https://avatars.githubusercontent.com/u/2818188?v=4", + "description": "Make 2d intensity maps of limb-darkened stars.", "topics": [ - "wot", - "web-of-things", - "w3c", - "thing-description-directory", - "tdd", - "thing-description" + "astronomy", + "limb-darkening", + "stars", + "astrophysics", + "planetary-transits" ] }, { - "uid": "github/jacob-long/jtools", - "url": "https://github.com/jacob-long/jtools", - "rel": "/software/repository/github/jacob-long/jtools", - "avatar": "https://avatars.githubusercontent.com/u/4957401?v=4", - "description": "Tools for summarizing/visualizing regressions and other helpful stuff", + "uid": "github/shikhar249/OnionMHC", + "url": "https://github.com/shikhar249/OnionMHC", + "rel": "/software/repository/github/shikhar249/OnionMHC", + "avatar": "https://avatars.githubusercontent.com/u/43881057?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/binzhulab/SUITOR", + "url": "https://github.com/binzhulab/SUITOR", + "rel": "/software/repository/github/binzhulab/SUITOR", + "avatar": "https://avatars.githubusercontent.com/u/51965629?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/b-pardi/BraTaDio", + "url": "https://github.com/b-pardi/BraTaDio", + "rel": "/software/repository/github/b-pardi/BraTaDio", + "avatar": "https://avatars.githubusercontent.com/u/72064522?v=4", + "description": "Python based computational for for analyzing quartz crystal microbalance with dissipation (QCM-D) experimental data", + "topics": [] + }, + { + "uid": "github/tariks/peakachu", + "url": "https://github.com/tariks/peakachu", + "rel": "/software/repository/github/tariks/peakachu", + "avatar": "https://avatars3.githubusercontent.com/u/3433086?v=4", + "description": "Genome-wide contact analysis using sklearn", + "topics": [] + }, + { + "uid": "github/cgarraffo/StelNet", + "url": "https://github.com/cgarraffo/StelNet", + "rel": "/software/repository/github/cgarraffo/StelNet", + "avatar": "https://avatars.githubusercontent.com/u/15983620?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/indralab/pybiopax", + "url": "https://github.com/indralab/pybiopax", + "rel": "/software/repository/github/indralab/pybiopax", + "avatar": "https://avatars.githubusercontent.com/u/41387246?v=4", + "description": "PyBioPAX: A python implementation of the BioPAX object model", "topics": [ - "r", - "social-sciences", - "r-package" + "python", + "biopax", + "biology", + "systems-biology" ] }, { - "uid": "github/transientskp/tkp", - "url": "https://github.com/transientskp/tkp", - "rel": "/software/repository/github/transientskp/tkp", - "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", - "description": "A transients-discovery pipeline for astronomical image-based surveys", - "topics": [] + "uid": "github/NuGrid/NuPyCEE", + "url": "https://github.com/NuGrid/NuPyCEE", + "rel": "/software/repository/github/NuGrid/NuPyCEE", + "avatar": "https://avatars.githubusercontent.com/u/17138624?v=4", + "description": "You can find the website of NuPyCEE at ", + "topics": [ + "galaxies", + "chemical-evolution", + "nugrid" + ] }, { - "uid": "github/transientskp/pyse", - "url": "https://github.com/transientskp/pyse", - "rel": "/software/repository/github/transientskp/pyse", - "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", - "description": "Python Source Extractor", + "uid": "github/curl/curl", + "url": "https://github.com/curl/curl", + "rel": "/software/repository/github/curl/curl", + "avatar": "https://avatars0.githubusercontent.com/u/16928085?v=4", + "description": "A command line tool and library for transferring data with URL syntax, supporting DICT, FILE, FTP, FTPS, GOPHER, GOPHERS, HTTP, HTTPS, IMAP, IMAPS, LDAP, LDAPS, MQTT, POP3, POP3S, RTMP, RTMPS, RTSP, SCP, SFTP, SMB, SMBS, SMTP, SMTPS, TELNET and TFTP. libcurl offers a myriad of powerful features", "topics": [ - "radioastronomy", - "science", - "sourcefinder", - "transients", - "python", - "astronomy" + "http", + "https", + "ftp", + "user-agent", + "client", + "library", + "curl", + "libcurl", + "c", + "transfer-data", + "ldap", + "mqtt", + "sftp", + "scp" ] }, { - "uid": "github/transientskp/lpf", - "url": "https://github.com/transientskp/lpf", - "rel": "/software/repository/github/transientskp/lpf", - "avatar": "https://avatars.githubusercontent.com/u/1758709?v=4", + "uid": "github/galkintool/galkin", + "url": "https://github.com/galkintool/galkin", + "rel": "/software/repository/github/galkintool/galkin", + "avatar": "https://avatars.githubusercontent.com/u/20191718?v=4", "description": null, "topics": [] }, { - "uid": "github/rramadeu/AGHmatrix", - "url": "https://github.com/rramadeu/AGHmatrix", - "rel": "/software/repository/github/rramadeu/AGHmatrix", - "avatar": "https://avatars.githubusercontent.com/u/10066681?v=4", - "description": "An R package to compute relationship matrices for diploid and autopolyploid species", + "uid": "github/AntoineDarveau/jwst", + "url": "https://github.com/AntoineDarveau/jwst", + "rel": "/software/repository/github/AntoineDarveau/jwst", + "avatar": "https://avatars.githubusercontent.com/u/25065082?v=4", + "description": "Python library for science observations from the James Webb Space Telescope ", "topics": [] }, { - "uid": "github/JuliaArrays/BlockArrays.jl", - "url": "https://github.com/JuliaArrays/BlockArrays.jl", - "rel": "/software/repository/github/JuliaArrays/BlockArrays.jl", - "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", - "description": "BlockArrays for Julia", + "uid": "github/kazewong/flowMC", + "url": "https://github.com/kazewong/flowMC", + "rel": "/software/repository/github/kazewong/flowMC", + "avatar": "https://avatars.githubusercontent.com/u/8803931?v=4", + "description": "Normalizing-flow enhanced sampling package for probabilistic inference in Jax", "topics": [ - "julia", - "matrix", - "arrays", - "blockarrays" + "jax", + "mcmc", + "normalizing-flows", + "stat" ] }, { - "uid": "github/JuliaArrays/InfiniteArrays.jl", - "url": "https://github.com/JuliaArrays/InfiniteArrays.jl", - "rel": "/software/repository/github/JuliaArrays/InfiniteArrays.jl", - "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", - "description": "A Julia package for representing infinite-dimensional arrays", + "uid": "github/tripathi/Atmospheric-Athena", + "url": "https://github.com/tripathi/Atmospheric-Athena", + "rel": "/software/repository/github/tripathi/Atmospheric-Athena", + "avatar": "https://avatars.githubusercontent.com/u/1373620?v=4", + "description": "3D Atmospheric escape model with ionizing radiative transfer", "topics": [] }, { - "uid": "github/JuliaArrays/LazyArrays.jl", - "url": "https://github.com/JuliaArrays/LazyArrays.jl", - "rel": "/software/repository/github/JuliaArrays/LazyArrays.jl", - "avatar": "https://avatars.githubusercontent.com/u/21312771?v=4", - "description": "Lazy arrays and linear algebra in Julia", + "uid": "github/ialbert/genescape-central", + "url": "https://github.com/ialbert/genescape-central", + "rel": "/software/repository/github/ialbert/genescape-central", + "avatar": "https://avatars.githubusercontent.com/u/46249?v=4", + "description": "Gene Ontology subgraph visualizations", "topics": [] }, { - "uid": "github/DESI-UR/VAST", - "url": "https://github.com/DESI-UR/VAST", - "rel": "/software/repository/github/DESI-UR/VAST", - "avatar": "https://avatars.githubusercontent.com/u/30055315?v=4", - "description": "Void Analysis Software Toolkit", + "uid": "github/ageller/firefly", + "url": "https://github.com/ageller/Firefly", + "rel": "/software/repository/github/ageller/firefly", + "avatar": "https://avatars.githubusercontent.com/u/753117?v=4", + "description": "A WebGL interactive particle viewer", "topics": [] }, { - "uid": "github/jianhuupenn/SpaGCN", - "url": "https://github.com/jianhuupenn/SpaGCN", - "rel": "/software/repository/github/jianhuupenn/SpaGCN", - "avatar": "https://avatars.githubusercontent.com/u/26659799?v=4", - "description": "SpaGCN: Integrating gene expression, spatial location and histology to identify spatial domains and spatially variable genes by graph convolutional network", - "topics": [ - "spatial-transcriptomics", - "graph-convolutional-network", - "spatial-domains", - "spatially-variable-genes" - ] + "uid": "github/Libensemble/libensemble", + "url": "https://github.com/Libensemble/libensemble", + "rel": "/software/repository/github/Libensemble/libensemble", + "avatar": "https://avatars.githubusercontent.com/u/24534232?v=4", + "description": "A Python toolkit for coordinating asynchronous and dynamic ensembles of calculations.", + "topics": [] }, { - "uid": "github/jamesaird/FAST", - "url": "https://github.com/jamesaird/FAST", - "rel": "/software/repository/github/jamesaird/FAST", - "avatar": "https://avatars.githubusercontent.com/u/1553912?v=4", - "description": "Fitting and Assessment of Synthetic Templates - an IDL-based code that fits stellar population synthesis templates to broadband photometry and/or spectra.", + "uid": "github/spicy-oil/hfs_fit", + "url": "https://github.com/spicy-oil/hfs_fit", + "rel": "/software/repository/github/spicy-oil/hfs_fit", + "avatar": "https://avatars.githubusercontent.com/u/55635165?v=4", + "description": null, "topics": [] }, { - "uid": "github/mrazomej/AutoEncoderToolkit.jl", - "url": "https://github.com/mrazomej/AutoEncoderToolkit.jl", - "rel": "/software/repository/github/mrazomej/AutoEncoderToolkit.jl", - "avatar": "https://avatars.githubusercontent.com/u/8460891?v=4", - "description": "Julia package with several functions to train and analyze Autoencoder-based neural networks", + "uid": "github/pmelsted/pizzly", + "url": "https://github.com/pmelsted/pizzly", + "rel": "/software/repository/github/pmelsted/pizzly", + "avatar": "https://avatars.githubusercontent.com/u/1830628?v=4", + "description": "Fast fusion detection using kallisto", "topics": [] }, { - "uid": "github/difuture-lmu/dsBinVal", - "url": "https://github.com/difuture-lmu/dsBinVal", - "rel": "/software/repository/github/difuture-lmu/dsBinVal", - "avatar": "https://avatars.githubusercontent.com/u/82653878?v=4", - "description": "ROC-GLM and calibration analysis for DataSHIELD", - "topics": [ - "auc", - "calibration", - "datashield", - "distributed-computing", - "roc" - ] + "uid": "github/ericcombiolab/LRTK", + "url": "https://github.com/ericcombiolab/LRTK", + "rel": "/software/repository/github/ericcombiolab/LRTK", + "avatar": "https://avatars.githubusercontent.com/u/103976514?v=4", + "description": "A unified and versatile toolkit for analyzing Linked-Read sequencing data", + "topics": [] }, { - "uid": "github/connor-lab/vapor", - "url": "https://github.com/connor-lab/vapor", - "rel": "/software/repository/github/connor-lab/vapor", - "avatar": "https://avatars.githubusercontent.com/u/41902601?v=4", - "description": "is a tool for classification of Influenza samples from raw short read sequence data for downstream bioinformatics analysis.", + "uid": "github/liangcheng-hrbmu/EnrichDO", + "url": "https://github.com/liangcheng-hrbmu/EnrichDO", + "rel": "/software/repository/github/liangcheng-hrbmu/EnrichDO", + "avatar": "https://avatars.githubusercontent.com/u/15272581?v=4", + "description": "a Bioinformatics Tool for Annotating and Enrichment Analysis with Disease Ontology", "topics": [] }, { - "uid": "github/yuansh3354/CaSee", - "url": "https://github.com/yuansh3354/CaSee", - "rel": "/software/repository/github/yuansh3354/CaSee", - "avatar": "https://avatars.githubusercontent.com/u/65653560?v=4", - "description": null, + "uid": "github/McMahonCosmologyGroup/holosim-ml", + "url": "https://github.com/McMahonCosmologyGroup/holosim-ml", + "rel": "/software/repository/github/McMahonCosmologyGroup/holosim-ml", + "avatar": "https://avatars.githubusercontent.com/u/83089765?v=4", + "description": "machine learning applied to the efficient analysis of radio holography measurements of complex optical systems", "topics": [] }, { - "uid": "github/amoradinejad/limHaloPT", - "url": "https://github.com/amoradinejad/limHaloPT", - "rel": "/software/repository/github/amoradinejad/limHaloPT", - "avatar": "https://avatars.githubusercontent.com/u/25491836?v=4", - "description": "The public repository of limHaloPT (master for the most recent version of the code)", - "topics": [] + "uid": "github/pylops/pyproximal", + "url": "https://github.com/PyLops/pyproximal", + "rel": "/software/repository/github/pylops/pyproximal", + "avatar": "https://avatars.githubusercontent.com/u/74298005?v=4", + "description": "PyProximal \u2013 Proximal Operators and Algorithms in Python", + "topics": [ + "proximal-algorithms", + "linear-algebra", + "inverse-problems", + "python" + ] }, { - "uid": "github/Feng-Ji-Lab/FedIRT", - "url": "https://github.com/Feng-Ji-Lab/FedIRT", - "rel": "/software/repository/github/Feng-Ji-Lab/FedIRT", - "avatar": "https://avatars.githubusercontent.com/u/166061424?v=4", - "description": null, + "uid": "github/pavanvidem/chira", + "url": "https://github.com/pavanvidem/chira", + "rel": "/software/repository/github/pavanvidem/chira", + "avatar": "https://avatars2.githubusercontent.com/u/5268277?v=4", + "description": "Chimeric Read Annotator", "topics": [] }, { - "uid": "github/intake/intake", - "url": "https://github.com/intake/intake", - "rel": "/software/repository/github/intake/intake", - "avatar": "https://avatars.githubusercontent.com/u/1469464?v=4", - "description": "Intake is a lightweight package for finding, investigating, loading and disseminating data.", + "uid": "github/jameschapman19/cca_zoo", + "url": "https://github.com/jameschapman19/cca_zoo", + "rel": "/software/repository/github/jameschapman19/cca_zoo", + "avatar": "https://avatars.githubusercontent.com/u/56592797?v=4", + "description": "Canonical Correlation Analysis Zoo: A collection of Regularized, Deep Learning based, Kernel, and Probabilistic methods in a scikit-learn style framework", "topics": [ - "python", - "data-access", - "data-catalog" + "dcca", + "deep", + "cca", + "canonical-correlation-analysis", + "kernel", + "multiview", + "pytorch", + "cca-zoo", + "multiset-cca", + "tensor-cca", + "pls" ] }, { - "uid": "github/jlillo/tpfplotter", - "url": "https://github.com/jlillo/tpfplotter", - "rel": "/software/repository/github/jlillo/tpfplotter", - "avatar": "https://avatars.githubusercontent.com/u/6754663?v=4", - "description": "TESS TPF plotter with Gaia catalog", + "uid": "github/vmalnathnambiar/exfilms", + "url": "https://github.com/vmalnathnambiar/exfilms", + "rel": "/software/repository/github/vmalnathnambiar/exfilms", + "avatar": "https://avatars.githubusercontent.com/u/104112048?v=4", + "description": "A cross-platform, command line interface tool to extract mass spectrometry data from mzML formatted files, with filtering capabilities.", + "topics": [ + "data-extraction", + "mass-spectrometry", + "spectrum-filtering", + "command-line-tool", + "data-standardisation", + "open-source" + ] + }, + { + "uid": "github/tloredo/CUDAHM", + "url": "https://github.com/tloredo/CUDAHM", + "rel": "/software/repository/github/tloredo/CUDAHM", + "avatar": "https://avatars.githubusercontent.com/u/186722?v=4", + "description": "Routines for using CUDA to perform MCMC Sampling of Hierarchical Models with GPUs.", "topics": [] }, { - "uid": "github/projectmesa/mesa", - "url": "https://github.com/projectmesa/mesa", - "rel": "/software/repository/github/projectmesa/mesa", - "avatar": "https://avatars.githubusercontent.com/u/8754505?v=4", - "description": "Mesa is an open-source Python library for agent-based modeling, ideal for simulating complex systems and exploring emergent behaviors.", + "uid": "github/neuromodulation/py_neuromodulation", + "url": "https://github.com/neuromodulation/py_neuromodulation", + "rel": "/software/repository/github/neuromodulation/py_neuromodulation", + "avatar": "https://avatars.githubusercontent.com/u/58917760?v=4", + "description": "Real-time analysis of intracranial neurophysiology recordings.", "topics": [ - "mesa", - "agent-based-modeling", - "agent-based-simulation", - "simulation-framework", - "simulation", - "simulation-environment", - "complex-systems", - "complexity-analysis", - "modeling-agents", - "spatial-models", - "gis" + "python", + "deep-brain-stimulation", + "electrocorticography", + "ecog", + "dbs", + "machine-learning", + "real-time" ] }, { - "uid": "github/ParkerLab/ataqv", - "url": "https://github.com/ParkerLab/ataqv", - "rel": "/software/repository/github/ParkerLab/ataqv", - "avatar": "https://avatars.githubusercontent.com/u/10228461?v=4", - "description": "A toolkit for QC and visualization of ATAC-seq results.", + "uid": "github/pokynmr/ipick", + "url": "https://github.com/pokynmr/iPick", + "rel": "/software/repository/github/pokynmr/ipick", + "avatar": "https://avatars.githubusercontent.com/u/46821344?v=4", + "description": "Multiprocessing Peak Picking Software for UCSF NMR Spectra", "topics": [ - "atac-seq", - "quality-control", - "visualization", - "software", - "tool" + "peaks", + "nmrfam-sparky", + "reliability-score", + "noise-peaks", + "spectra", + "nmr" ] }, { - "uid": "github/minterpy-project/minterpy", - "url": "https://github.com/minterpy-project/minterpy", - "rel": "/software/repository/github/minterpy-project/minterpy", - "avatar": "https://avatars.githubusercontent.com/u/127753488?v=4", - "description": "Multivariate polynomial interpolation in Python", + "uid": "github/PynPoint/PynPoint", + "url": "https://github.com/PynPoint/PynPoint", + "rel": "/software/repository/github/PynPoint/PynPoint", + "avatar": "https://avatars.githubusercontent.com/u/37398986?v=4", + "description": "Pipeline for processing and analysis of high-contrast imaging data", "topics": [] }, { - "uid": "github/qMRLab/qMRLab", - "url": "https://github.com/qMRLab/qMRLab", - "rel": "/software/repository/github/qMRLab/qMRLab", - "avatar": "https://avatars3.githubusercontent.com/u/42773796?v=4", - "description": "Quantitative Magnetic Resonance Imaging Made Easy with qMRLab: a Software for Data Simulation, Analysis and Visualization", + "uid": "github/ylab-hi/ScanITD", + "url": "https://github.com/ylab-hi/ScanITD", + "rel": "/software/repository/github/ylab-hi/ScanITD", + "avatar": "https://avatars0.githubusercontent.com/u/44730433?v=4", + "description": null, + "topics": [] + }, + { + "uid": "github/ylab-hi/ScanExitronLR", + "url": "https://github.com/ylab-hi/ScanExitronLR", + "rel": "/software/repository/github/ylab-hi/ScanExitronLR", + "avatar": "https://avatars.githubusercontent.com/u/44730433?v=4", + "description": "A package for the characterization and quantification of exitron splicing events in long-read RNA-seq", "topics": [ - "mri", - "analysis", - "data-simulation", - "quantitative", - "magnetization", - "relaxometry", - "mapping" + "python", + "bioinformatics-tool", + "long-read-data" ] }, { - "uid": "github/myrafproject/myrafproject", - "url": "https://github.com/myrafproject/myrafproject", - "rel": "/software/repository/github/myrafproject/myrafproject", - "avatar": "https://avatars.githubusercontent.com/u/11473972?v=4", - "description": "An Easy GUI for IRAF Photometry: MYRaf Project 3.0! ", + "uid": "github/marco-oliva/pfp", + "url": "https://github.com/marco-oliva/pfp", + "rel": "/software/repository/github/marco-oliva/pfp", + "avatar": "https://avatars.githubusercontent.com/u/55564108?v=4", + "description": "Prefix Free Parsing", + "topics": [] + }, + { + "uid": "github/MarcNeveu/IcyDwarf", + "url": "https://github.com/MarcNeveu/IcyDwarf", + "rel": "/software/repository/github/MarcNeveu/IcyDwarf", + "avatar": "https://avatars.githubusercontent.com/u/3951494?v=4", + "description": "Coupled geophysical-geochemical-orbital evolution model of icy worlds.", + "topics": [] + }, + { + "uid": "github/SpaceOdyssey/Blobby3D", + "url": "https://github.com/SpaceOdyssey/Blobby3D", + "rel": "/software/repository/github/SpaceOdyssey/Blobby3D", + "avatar": "https://avatars.githubusercontent.com/u/20017927?v=4", + "description": "Blobby3D is a tool to perform Bayesian inference for gas kinematics on emission line observations of galaxies using Integral Field Spectroscopy.", "topics": [ - "astronomy", - "photometry", - "photometry-pipeline" + "astrophysics", + "bayesian-inference", + "spectroscopy" ] }, { - "uid": "github/CGAL/cgal", - "url": "https://github.com/CGAL/cgal", - "rel": "/software/repository/github/CGAL/cgal", - "avatar": "https://avatars0.githubusercontent.com/u/5746664?v=4", - "description": "The public CGAL repository, see the README below", + "uid": "github/bthorne93/PySM_public", + "url": "https://github.com/bthorne93/PySM_public", + "rel": "/software/repository/github/bthorne93/PySM_public", + "avatar": "https://avatars.githubusercontent.com/u/16899444?v=4", + "description": "PySM: Software for simulating the Galactic microwave sky", "topics": [ - "cgal", - "c-plus-plus", - "geometry", - "algorithms", - "library", - "cpp", - "template-library", - "geometry-processing", - "computational-geometry", - "triangulation", - "mesh-processing", - "arrange", - "point-cloud", - "boolean-operations", - "polygon", - "meshes", - "voronoi-diagram" + "dust", + "polarization", + "planck", + "intensity", + "ame", + "sky", + "cmb" ] }, { - "uid": "github/ulelab/ultraplex", - "url": "https://github.com/ulelab/ultraplex", - "rel": "/software/repository/github/ulelab/ultraplex", - "avatar": "https://avatars.githubusercontent.com/u/5070671?v=4", - "description": "Ultra-fast 5' and 3' demultiplexer", + "uid": "github/flosalbizziae/kataegis", + "url": "https://github.com/flosalbizziae/kataegis", + "rel": "/software/repository/github/flosalbizziae/kataegis", + "avatar": "https://avatars.githubusercontent.com/u/10743837?v=4", + "description": null, "topics": [] }, { - "uid": "github/Incpink-Liu/DNA-storage-R_plus", - "url": "https://github.com/Incpink-Liu/DNA-storage-R_plus", - "rel": "/software/repository/github/Incpink-Liu/DNA-storage-R_plus", - "avatar": "https://avatars.githubusercontent.com/u/96714586?v=4", - "description": null, + "uid": "github/mroosmalen/nanosv", + "url": "https://github.com/mroosmalen/nanosv", + "rel": "/software/repository/github/mroosmalen/nanosv", + "avatar": "https://avatars.githubusercontent.com/u/7425822?v=4", + "description": "SV caller for nanopore data", "topics": [] }, { - "uid": "github/VBlesius/RHRT", - "url": "https://github.com/VBlesius/RHRT", - "rel": "/software/repository/github/VBlesius/RHRT", - "avatar": "https://avatars.githubusercontent.com/u/71442854?v=4", - "description": "R package to assess Heart Rate Turbulence from RR interval data", + "uid": "github/seeh/surprise", + "url": "https://github.com/seeh/surprise", + "rel": "/software/repository/github/seeh/surprise", + "avatar": "https://avatars.githubusercontent.com/u/6814175?v=4", + "description": "Package for estimating relative entropy and Surprise between two posterior samples, assuming they are Gaussian.", "topics": [] }, { - "uid": "github/eggnogdb/eggnog-mapper", - "url": "https://github.com/eggnogdb/eggnog-mapper", - "rel": "/software/repository/github/eggnogdb/eggnog-mapper", - "avatar": "https://avatars.githubusercontent.com/u/44813203?v=4", - "description": "Fast genome-wide functional annotation through orthology assignment.", - "topics": [ - "annotations", - "orthology-assignments", - "functional-annotation", - "genomics" - ] + "uid": "github/timothyas/xesn", + "url": "https://github.com/timothyas/xesn", + "rel": "/software/repository/github/timothyas/xesn", + "avatar": "https://avatars.githubusercontent.com/u/28659578?v=4", + "description": "Large scale Echo State Networks powered by xarray and dask.", + "topics": [] }, { - "uid": "github/sandmanns/CopyDetective", - "url": "https://github.com/sandmanns/CopyDetective", - "rel": "/software/repository/github/sandmanns/CopyDetective", - "avatar": "https://avatars2.githubusercontent.com/u/30867840?v=4", - "description": "Detection threshold aware CNV Calling in NGS data", + "uid": "github/mslonina/Mechanic", + "url": "https://github.com/mslonina/Mechanic", + "rel": "/software/repository/github/mslonina/Mechanic", + "avatar": "https://avatars.githubusercontent.com/u/557634?v=4", + "description": "The MPI/HDF code framework and task management system", "topics": [] }, { - "uid": "github/MicGrasso/bigonlight", - "url": "https://github.com/MicGrasso/bigonlight", - "rel": "/software/repository/github/MicGrasso/bigonlight", - "avatar": "https://avatars.githubusercontent.com/u/74984781?v=4", - "description": "The BiGONLight is a Mathematica package created by Michele Grasso to study light propagation in the geometric optics regime using the Bi-local Geodesic Operator formalism.", + "uid": "github/SynxFlow/SynxFlow", + "url": "https://github.com/SynxFlow/SynxFlow", + "rel": "/software/repository/github/SynxFlow/SynxFlow", + "avatar": "https://avatars.githubusercontent.com/u/145569668?v=4", + "description": "Simulates flood, landslide and debris flow dynamically using GPUs", + "topics": [ + "debrisflow", + "flood", + "landslide", + "modelling" + ] + }, + { + "uid": "github/EIT-ALIVE/eitprocessing", + "url": "https://github.com/EIT-ALIVE/eitprocessing", + "rel": "/software/repository/github/EIT-ALIVE/eitprocessing", + "avatar": "https://avatars.githubusercontent.com/u/128688874?v=4", + "description": "Software for electrical impedance tomography data loading, visualization and processing", "topics": [] }, { - "uid": "github/agusinac/OmicFlow", - "url": "https://github.com/agusinac/OmicFlow", - "rel": "/software/repository/github/agusinac/OmicFlow", - "avatar": "https://avatars.githubusercontent.com/u/93720822?v=4", - "description": null, + "uid": "github/ConorMacBride/mcalf", + "url": "https://github.com/ConorMacBride/mcalf", + "rel": "/software/repository/github/ConorMacBride/mcalf", + "avatar": "https://avatars.githubusercontent.com/u/25007832?v=4", + "description": "MCALF: Multi-Component Atmospheric Line Fitting", "topics": [] }, { - "uid": "github/keck-datareductionpipelines/MosfireDRP", - "url": "https://github.com/Keck-DataReductionPipelines/MosfireDRP", - "rel": "/software/repository/github/keck-datareductionpipelines/MosfireDRP", - "avatar": "https://avatars.githubusercontent.com/u/9344298?v=4", - "description": null, + "uid": "github/Bonfanti88/MCMCI", + "url": "https://github.com/Bonfanti88/MCMCI", + "rel": "/software/repository/github/Bonfanti88/MCMCI", + "avatar": "https://avatars.githubusercontent.com/u/22291413?v=4", + "description": "A code to fully characterise an exoplanetary system (Bonfanti & Gillon, 2020)", "topics": [] }, { - "uid": "github/Cloud-Drift/clouddrift", - "url": "https://github.com/Cloud-Drift/clouddrift", - "rel": "/software/repository/github/Cloud-Drift/clouddrift", - "avatar": "https://avatars.githubusercontent.com/u/91622877?v=4", - "description": "CloudDrift accelerates the use of Lagrangian data for atmospheric, oceanic, and climate sciences.", + "uid": "github/huangnengCSU/compleasm", + "url": "https://github.com/huangnengCSU/compleasm", + "rel": "/software/repository/github/huangnengCSU/compleasm", + "avatar": "https://avatars.githubusercontent.com/u/28866823?v=4", + "description": "A genome completeness evaluation tool based on miniprot", "topics": [ - "climate-data", - "climate-science", - "data-structures", - "oceanography", - "python" + "bioinformatics" ] }, { - "uid": "github/wesleyburr/subMaldi", - "url": "https://github.com/wesleyburr/subMaldi", - "rel": "/software/repository/github/wesleyburr/subMaldi", - "avatar": "https://avatars.githubusercontent.com/u/882471?v=4", - "description": "subMaldi: a package for R", + "uid": "github/benjaminbolling/DynaGUI", + "url": "https://github.com/benjaminbolling/DynaGUI", + "rel": "/software/repository/github/benjaminbolling/DynaGUI", + "avatar": "https://avatars2.githubusercontent.com/u/56224950?v=4", + "description": "A Dynamic Graphical User Interface package, which gives users a method to construct temporary, permanent and/or a set of GUI:s for users in a simple and fast manner combined with diagnostics tools (with advance 1D and 2D plotting methods).", "topics": [] }, { - "uid": "github/trinityrnaseq/wiki", - "url": null, - "rel": "/software/repository/github/trinityrnaseq/wiki", - "avatar": "", - "description": "a software package comprised of three independent software modules (Inchworm, Chrysalis, and Butterfly) for the efficient and robust de novo reconstruction of transcriptomes from RNA-seq data.", + "uid": "github/benjaminbolling/RSW", + "url": "https://github.com/benjaminbolling/RSW", + "rel": "/software/repository/github/benjaminbolling/RSW", + "avatar": "https://avatars.githubusercontent.com/u/56224950?v=4", + "description": "A Computational Approach to Generate Multi-Shift Rotational Workforce Schedules.", "topics": [] }, { - "uid": "github/andreaminio/haplosync", - "url": "https://github.com/andreaminio/HaploSync", - "rel": "/software/repository/github/andreaminio/haplosync", - "avatar": "https://avatars.githubusercontent.com/u/33559900?v=4", - "description": "Tools for haplotype-wise reconstruction of pseudomolecules", + "uid": "github/mmp2/megaman", + "url": "https://github.com/mmp2/megaman", + "rel": "/software/repository/github/mmp2/megaman", + "avatar": "https://avatars.githubusercontent.com/u/5679461?v=4", + "description": "megaman: Manifold Learning for Millions of Points ", "topics": [] }, { - "uid": "github/pyxnat/pyxnat", - "url": "https://github.com/pyxnat/pyxnat", - "rel": "/software/repository/github/pyxnat/pyxnat", - "avatar": "https://avatars.githubusercontent.com/u/809417?v=4", - "description": "XNAT in Python", - "topics": [] + "uid": "github/jmd-dk/concept", + "url": "https://github.com/jmd-dk/concept", + "rel": "/software/repository/github/jmd-dk/concept", + "avatar": "https://avatars.githubusercontent.com/u/9202794?v=4", + "description": "COsmological N-body CodE in PyThon", + "topics": [ + "cosmology", + "nbody-simulation", + "python" + ] }, { - "uid": "github/cb-geo/mpm", - "url": "https://github.com/cb-geo/mpm", - "rel": "/software/repository/github/cb-geo/mpm", - "avatar": "https://avatars2.githubusercontent.com/u/7850930?v=4", - "description": "CB-Geo High-Performance Material Point Method", + "uid": "github/EpistasisLab/tpot", + "url": "https://github.com/EpistasisLab/tpot", + "rel": "/software/repository/github/EpistasisLab/tpot", + "avatar": "https://avatars.githubusercontent.com/u/20861190?v=4", + "description": "A Python Automated Machine Learning tool that optimizes machine learning pipelines using genetic programming.", "topics": [ - "mpm", - "material-point-method", - "parallel", - "high-performance-computing" + "machine-learning", + "python", + "data-science", + "automl", + "automation", + "scikit-learn", + "hyperparameter-optimization", + "model-selection", + "parameter-tuning", + "automated-machine-learning", + "random-forest", + "gradient-boosting", + "feature-engineering", + "xgboost" ] }, { - "uid": "github/kathlandgren/SWAMPE", - "url": "https://github.com/kathlandgren/SWAMPE", - "rel": "/software/repository/github/kathlandgren/SWAMPE", - "avatar": "https://avatars.githubusercontent.com/u/78450083?v=4", - "description": "2D spectral-core shallow-water exoplanet atmosphere model", + "uid": "github/EpistasisLab/regens", + "url": "https://github.com/EpistasisLab/regens", + "rel": "/software/repository/github/EpistasisLab/regens", + "avatar": "https://avatars.githubusercontent.com/u/20861190?v=4", + "description": "Recombines real genomic segments to simulate whole genomes", + "topics": [ + "simulated-datasets", + "gwas-tools" + ] + }, + { + "uid": "github/PrincetonUniversity/athena", + "url": "https://github.com/PrincetonUniversity/athena", + "rel": "/software/repository/github/PrincetonUniversity/athena", + "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", + "description": "Athena++ GRMHD code and adaptive mesh refinement (AMR) framework", "topics": [] }, { - "uid": "github/Ambuj-UF/APOP", - "url": "https://github.com/Ambuj-UF/APOP", - "rel": "/software/repository/github/Ambuj-UF/APOP", - "avatar": "https://avatars.githubusercontent.com/u/7588003?v=4", - "description": "Allostery pocket prediction", + "uid": "github/PrincetonUniversity/Athena-Cversion", + "url": "https://github.com/PrincetonUniversity/Athena-Cversion", + "rel": "/software/repository/github/PrincetonUniversity/Athena-Cversion", + "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", + "description": null, "topics": [] }, { - "uid": "github/dicompyler/dicompyler-core", - "url": "https://github.com/dicompyler/dicompyler-core", - "rel": "/software/repository/github/dicompyler/dicompyler-core", - "avatar": "https://avatars.githubusercontent.com/u/8218748?v=4", - "description": "A library of core radiation therapy modules for DICOM RT used by dicompyler", + "uid": "github/PrincetonUniversity/FastTemplatePeriodogram", + "url": "https://github.com/PrincetonUniversity/FastTemplatePeriodogram", + "rel": "/software/repository/github/PrincetonUniversity/FastTemplatePeriodogram", + "avatar": "https://avatars.githubusercontent.com/u/1919273?v=4", + "description": "NlogN algorithm for least-squares fitting of periodic templates to noisy, non-equispaced time-series data.", "topics": [ - "dicom", - "dicom-rt", - "python", - "radiation-oncology", - "radiation-physics", - "dvh", - "hacktoberfest" + "periodogram", + "nfft", + "fourier-series", + "harmonics", + "lomb-scargle-periodogram", + "frequencies", + "optimal-parameters", + "time-series", + "astronomy", + "periodic", + "signal-processing" ] }, { - "uid": "github/KTH-Nek5000/UQit", - "url": "https://github.com/KTH-Nek5000/UQit", - "rel": "/software/repository/github/KTH-Nek5000/UQit", - "avatar": "https://avatars.githubusercontent.com/u/17083799?v=4", + "uid": "github/shirtsgroup/physical_validation", + "url": "https://github.com/shirtsgroup/physical_validation", + "rel": "/software/repository/github/shirtsgroup/physical_validation", + "avatar": "https://avatars.githubusercontent.com/u/6166660?v=4", + "description": "Physical validation of molecular simulations", + "topics": [ + "physical-validation", + "molecular-simulation", + "molecular-dynamics", + "molecular-mechanics", + "python" + ] + }, + { + "uid": "github/jeschaef/Graph4Med", + "url": "https://github.com/jeschaef/Graph4Med", + "rel": "/software/repository/github/jeschaef/Graph4Med", + "avatar": "https://avatars.githubusercontent.com/u/34156935?v=4", "description": null, "topics": [] }, { - "uid": "github/uwsbel/low-fidelity-dynamic-models", - "url": "https://github.com/uwsbel/low-fidelity-dynamic-models", - "rel": "/software/repository/github/uwsbel/low-fidelity-dynamic-models", - "avatar": "https://avatars.githubusercontent.com/u/2575255?v=4", - "description": "A library of fast and accurate low fidelity dynamic models for applications in robotics", + "uid": "github/pinellolab/CRISPRitz", + "url": "https://github.com/pinellolab/CRISPRitz", + "rel": "/software/repository/github/pinellolab/CRISPRitz", + "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", + "description": "a software package containing 5 different tools dedicated to perform predictive analysis and result assessement on CRISPR/Cas experiments.", "topics": [] }, { - "uid": "github/delphes/delphes", - "url": "https://github.com/delphes/delphes", - "rel": "/software/repository/github/delphes/delphes", - "avatar": "https://avatars.githubusercontent.com/u/8037711?v=4", - "description": "A framework for fast simulation of a generic collider experiment", + "uid": "github/pinellolab/CRISPResso2", + "url": "https://github.com/pinellolab/CRISPResso2", + "rel": "/software/repository/github/pinellolab/CRISPResso2", + "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", + "description": "Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments", "topics": [ - "physics-simulation", - "delphes", - "detector-simulation", - "hep" + "genome-editing", + "quantification", + "amplicon-sequences" ] }, { - "uid": "github/stingraysoftware/stingray", - "url": "https://github.com/StingraySoftware/stingray", - "rel": "/software/repository/github/stingraysoftware/stingray", - "avatar": "https://avatars.githubusercontent.com/u/17048750?v=4", - "description": "Anything can happen in the next half hour (including spectral timing made easy)!", + "uid": "github/pinellolab/STREAM", + "url": "https://github.com/pinellolab/STREAM", + "rel": "/software/repository/github/pinellolab/STREAM", + "avatar": "https://avatars.githubusercontent.com/u/30343453?v=4", + "description": "STREAM: Single-cell Trajectories Reconstruction, Exploration And Mapping of single-cell data", "topics": [ - "x-ray", - "astronomy", - "blackhole", - "pulsars", - "timeseries", - "astrophysics", - "fourier-analysis", - "fourier-transform", - "time-series", - "time-series-analysis", - "x-ray-binaries", - "neutronstars", - "data-analysis", - "blackholes", - "hacktoberfest" + "singlecell", + "trajectory", + "lineage", + "visualization", + "scatac-seq", + "scrna-seq", + "python" ] }, { - "uid": "github/slzarate/parliament2", - "url": "https://github.com/slzarate/parliament2", - "rel": "/software/repository/github/slzarate/parliament2", - "avatar": "https://avatars0.githubusercontent.com/u/12899963?v=4", - "description": "Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data", + "uid": "github/heatherprince/cosmoped", + "url": "https://github.com/heatherprince/cosmoped", + "rel": "/software/repository/github/heatherprince/cosmoped", + "avatar": "https://avatars.githubusercontent.com/u/15628365?v=4", + "description": "Compressed CMB likelihood code that uses the MOPED (Multiple/Massively Optimised Parameter Estimation and Data compression) compression scheme to compress the Planck power spectrum", "topics": [] }, { - "uid": "github/jspsych/jspsych", - "url": "https://github.com/jspsych/jsPsych", - "rel": "/software/repository/github/jspsych/jspsych", - "avatar": "https://avatars.githubusercontent.com/u/16901698?v=4", - "description": "Create behavioral experiments in a browser using JavaScript", - "topics": [ - "javascript", - "experiments", - "science", - "psychology", - "psychology-experiments", - "research", - "jspsych", - "experimental-design" - ] + "uid": "github/robashaw/libecpint", + "url": "https://github.com/robashaw/libecpint", + "rel": "/software/repository/github/robashaw/libecpint", + "avatar": "https://avatars.githubusercontent.com/u/24434359?v=4", + "description": "A C++ library for the efficient evaluation of integrals over effective core potentials.", + "topics": [] }, { - "uid": "github/chembl/EnsembleFlex", - "url": "https://github.com/chembl/EnsembleFlex", - "rel": "/software/repository/github/chembl/EnsembleFlex", - "avatar": "https://avatars.githubusercontent.com/u/3062531?v=4", - "description": "EnsembleFlex - Flexibility Analysis of Structure Ensembles", + "uid": "github/mildpiggy/DEP2", + "url": "https://github.com/mildpiggy/DEP2", + "rel": "/software/repository/github/mildpiggy/DEP2", + "avatar": "https://avatars.githubusercontent.com/u/37103678?v=4", + "description": "An r package for proteomics data Analysis, developed from DEP.", "topics": [] }, { - "uid": "github/keckert7/codes", - "url": "https://github.com/keckert7/codes", - "rel": "/software/repository/github/keckert7/codes", - "avatar": "https://avatars.githubusercontent.com/u/10523969?v=4", - "description": null, - "topics": [] + "uid": "github/gagneurlab/drop", + "url": "https://github.com/gagneurlab/drop", + "rel": "/software/repository/github/gagneurlab/drop", + "avatar": "https://avatars.githubusercontent.com/u/29893284?v=4", + "description": "(Detection of RNA Outlier Pipeline) pipeline to find aberrant gene expression events in RNA sequencing data.", + "topics": [ + "pipeline", + "rna-seq", + "genetic-diagnosis" + ] }, { - "uid": "github/facom/exorings", - "url": "https://github.com/facom/exorings", - "rel": "/software/repository/github/facom/exorings", - "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", - "description": "Code Repository for Exoring Transit Properties", + "uid": "github/nbarbey/TomograPy", + "url": "https://github.com/nbarbey/TomograPy", + "rel": "/software/repository/github/nbarbey/TomograPy", + "avatar": "https://avatars.githubusercontent.com/u/295277?v=4", + "description": "Siddon tomography algorithm", "topics": [] }, { - "uid": "github/facom/BHMcalc", - "url": "https://github.com/facom/BHMcalc", - "rel": "/software/repository/github/facom/BHMcalc", - "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", - "description": "Binary Habitability Mechanism - Calculator", - "topics": [] + "uid": "github/ahudde/greeks", + "url": "https://github.com/ahudde/greeks", + "rel": "/software/repository/github/ahudde/greeks", + "avatar": "https://avatars.githubusercontent.com/u/60978072?v=4", + "description": "Sensitivities of Prices of Financial Options and Implied Volatilites", + "topics": [ + "option", + "greeks", + "asian-option", + "r-package", + "implied-volatility" + ] }, { - "uid": "github/facom/tidev", - "url": "https://github.com/facom/tidev", - "rel": "/software/repository/github/facom/tidev", - "avatar": "https://avatars.githubusercontent.com/u/1230304?v=4", + "uid": "github/tzhu-bio/UMI-ATAC-seq", + "url": "https://github.com/tzhu-bio/UMI-ATAC-seq", + "rel": "/software/repository/github/tzhu-bio/UMI-ATAC-seq", + "avatar": "https://avatars.githubusercontent.com/u/54537420?v=4", "description": null, - "topics": [] + "topics": [ + "umi", + "atac-seq", + "deduplication" + ] }, { - "uid": "github/jianhuig/fairmetrics", - "url": "https://github.com/jianhuig/fairmetrics", - "rel": "/software/repository/github/jianhuig/fairmetrics", - "avatar": "https://avatars.githubusercontent.com/u/58570421?v=4", - "description": null, - "topics": [] + "uid": "github/babinyurii/recan", + "url": "https://github.com/babinyurii/recan", + "rel": "/software/repository/github/babinyurii/recan", + "avatar": "https://avatars.githubusercontent.com/u/28758465?v=4", + "description": "genetic distance plotting for recombination events analysis", + "topics": [ + "virology", + "bioinformatics", + "python", + "genetic-distances", + "dna-recombination", + "alignment", + "recombination-events", + "distance-plots" + ] }, { - "uid": "github/cwinpy/cwinpy", - "url": "https://github.com/cwinpy/cwinpy", - "rel": "/software/repository/github/cwinpy/cwinpy", - "avatar": "https://avatars.githubusercontent.com/u/47671702?v=4", - "description": "CW Inference in Python", + "uid": "github/ArkajyotiSaha/RandomForestsGLS", + "url": "https://github.com/ArkajyotiSaha/RandomForestsGLS", + "rel": "/software/repository/github/ArkajyotiSaha/RandomForestsGLS", + "avatar": "https://avatars.githubusercontent.com/u/24556858?v=4", + "description": null, "topics": [] }, { - "uid": "github/yrjia1015/CRISPRCasStack", - "url": "https://github.com/yrjia1015/CRISPRCasStack", - "rel": "/software/repository/github/yrjia1015/CRISPRCasStack", - "avatar": "https://avatars.githubusercontent.com/u/104757328?v=4", - "description": "A toolkit for automated identification of Cas proteins and CRISPR-Cas locus", - "topics": [] + "uid": "github/CATG-Github/panscan", + "url": "https://github.com/CATG-Github/panscan", + "rel": "/software/repository/github/CATG-Github/panscan", + "avatar": "https://avatars.githubusercontent.com/u/154121768?v=4", + "description": "A computational tool that identifies novel sequences, SVs, and gene duplications using pangenome VCF file and assemblies.", + "topics": [ + "bioinformatics", + "computational-biology", + "pangenome" + ] }, { - "uid": "github/kevin-tofu/scikit-topt", - "url": "https://github.com/kevin-tofu/scikit-topt", - "rel": "/software/repository/github/kevin-tofu/scikit-topt", - "avatar": "https://avatars.githubusercontent.com/u/85769623?v=4", - "description": "Scikit Topology Optimization with Scipy Family", + "uid": "github/Ayuei/DeBEIR", + "url": "https://github.com/Ayuei/DeBEIR", + "rel": "/software/repository/github/Ayuei/DeBEIR", + "avatar": "https://avatars.githubusercontent.com/u/18545131?v=4", + "description": "Dense Bi-Encoder Retrieval for Rapid Experimentation", "topics": [ - "topology-optimization", - "scikit-fem", - "fem", - "scikit", - "mesh", - "mesh-based", - "finite-element-analysis", - "unstructured", - "unstructured-meshes" + "dense-retrieval", + "python", + "transformers-ranking" ] }, { - "uid": "github/qboxcode/qbox-public", - "url": "https://github.com/qboxcode/qbox-public", - "rel": "/software/repository/github/qboxcode/qbox-public", - "avatar": "https://avatars.githubusercontent.com/u/13824137?v=4", - "description": "Qbox public repository", - "topics": [] + "uid": "github/bccp/nbodykit", + "url": "https://github.com/bccp/nbodykit", + "rel": "/software/repository/github/bccp/nbodykit", + "avatar": "https://avatars.githubusercontent.com/u/11237396?v=4", + "description": "Analysis kit for large-scale structure datasets, the massively parallel way", + "topics": [ + "astrophysics", + "cosmology", + "large-scale-structure", + "clustering", + "data-analysis", + "python", + "mpi", + "mpi4py", + "parallel-computing" + ] }, { - "uid": "github/AaronDavidSchneider/chemcomp", - "url": "https://github.com/AaronDavidSchneider/chemcomp", - "rel": "/software/repository/github/AaronDavidSchneider/chemcomp", - "avatar": "https://avatars.githubusercontent.com/u/7556347?v=4", - "description": "Modeling the chemical composition of planets formed in protoplanetary disks.", - "topics": [] + "uid": "github/nwchemgit/nwchem", + "url": "https://github.com/nwchemgit/nwchem", + "rel": "/software/repository/github/nwchemgit/nwchem", + "avatar": "https://avatars.githubusercontent.com/u/33767317?v=4", + "description": "NWChem: Open Source High-Performance Computational Chemistry", + "topics": [ + "computational-chemistry", + "parallel-computing", + "electronic-structure-calculations", + "molecular-simulation", + "density-functional-theory", + "nwchem", + "chemistry", + "hartree-fock", + "quantum-chemistry" + ] }, { - "uid": "github/njcuk9999/apero-drs", - "url": "https://github.com/njcuk9999/apero-drs", - "rel": "/software/repository/github/njcuk9999/apero-drs", - "avatar": "https://avatars.githubusercontent.com/u/6008608?v=4", - "description": "A PipelinE to Reduce Observations - The DRS for SPIRou (CFHT)", + "uid": "github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", + "url": "https://github.com/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", + "rel": "/software/repository/github/zhangxn1026/a-scheme-that-combines-Srun-job-submission-mode-Sbatch-job-submission-mode-and-Monitor-function-SSM-", + "avatar": "https://avatars.githubusercontent.com/u/120310498?v=4", + "description": null, "topics": [] }, { - "uid": "github/mjshao06/pdifFinder", - "url": "https://github.com/mjshao06/pdifFinder", - "rel": "/software/repository/github/mjshao06/pdifFinder", - "avatar": "https://avatars.githubusercontent.com/u/91299313?v=4", - "description": null, + "uid": "github/brinckmann/montepython_public", + "url": "https://github.com/brinckmann/montepython_public", + "rel": "/software/repository/github/brinckmann/montepython_public", + "avatar": "https://avatars.githubusercontent.com/u/15049519?v=4", + "description": "Public repository for the Monte Python Code", "topics": [] }, { - "uid": "github/apertif/apercal", - "url": "https://github.com/apertif/apercal", - "rel": "/software/repository/github/apertif/apercal", - "avatar": "https://avatars.githubusercontent.com/u/38492619?v=4", - "description": null, + "uid": "github/CliMA/CalibrateEmulateSample.jl", + "url": "https://github.com/CliMA/CalibrateEmulateSample.jl", + "rel": "/software/repository/github/CliMA/CalibrateEmulateSample.jl", + "avatar": "https://avatars.githubusercontent.com/u/43161188?v=4", + "description": "Stochastic Optimization, Learning, Uncertainty and Sampling", "topics": [] }, { - "uid": "github/VicidominiLab/BrightEyes-MCS", - "url": "https://github.com/VicidominiLab/BrightEyes-MCS", - "rel": "/software/repository/github/VicidominiLab/BrightEyes-MCS", - "avatar": "https://avatars.githubusercontent.com/u/61466143?v=4", - "description": "BrightEyes Microscope Control Suite", + "uid": "github/CliMA/EnsembleKalmanProcesses.jl", + "url": "https://github.com/CliMA/EnsembleKalmanProcesses.jl", + "rel": "/software/repository/github/CliMA/EnsembleKalmanProcesses.jl", + "avatar": "https://avatars.githubusercontent.com/u/43161188?v=4", + "description": "Implements Optimization and approximate uncertainty quantification algorithms, Ensemble Kalman Inversion, and Ensemble Kalman Processes.", "topics": [] }, { - "uid": "github/cy-xu/cosmic-conn", - "url": "https://github.com/cy-xu/cosmic-conn", - "rel": "/software/repository/github/cy-xu/cosmic-conn", - "avatar": "https://avatars.githubusercontent.com/u/24612082?v=4", - "description": "Cosmic-CoNN: A Cosmic Ray Detection Deep-Learning Framework, Dataset, and Toolkit", - "topics": [ - "astronomy-data-reduction", - "cosmic-rays", - "ccd-observation", - "neural-networks", - "classification", - "deep-learning", - "convolutional-neural-networks" - ] + "uid": "github/mazzalab/pyntacle", + "url": "https://github.com/mazzalab/pyntacle", + "rel": "/software/repository/github/mazzalab/pyntacle", + "avatar": "https://avatars0.githubusercontent.com/u/10012441?v=4", + "description": "A high performance python package for network analysis based on non canonical metrics", + "topics": [] }, { - "uid": "github/cameronliang/BayesVP", - "url": "https://github.com/cameronliang/bayesvp", - "rel": "/software/repository/github/cameronliang/BayesVP", - "avatar": "https://avatars.githubusercontent.com/u/18225386?v=4", - "description": null, + "uid": "github/MarioRomeroC/Mixclask", + "url": "https://github.com/MarioRomeroC/Mixclask", + "rel": "/software/repository/github/MarioRomeroC/Mixclask", + "avatar": "https://avatars.githubusercontent.com/u/25634276?v=4", + "description": "Mixing cloudy and skirt", "topics": [] }, { - "uid": "github/quanted/esat", - "url": "https://github.com/quanted/esat", - "rel": "/software/repository/github/quanted/esat", - "avatar": "https://avatars.githubusercontent.com/u/16341712?v=4", - "description": "EPA's Environmental Source Apportionment Toolkit (ESAT) python package", + "uid": "github/ExObsSim/ExoRad2-public", + "url": "https://github.com/ExObsSim/ExoRad2-public", + "rel": "/software/repository/github/ExObsSim/ExoRad2-public", + "avatar": "https://avatars.githubusercontent.com/u/68009281?v=4", + "description": "ExoRad, the generic point source radiometric model.", "topics": [] }, { - "uid": "github/relipmoc/skewer", - "url": "https://github.com/relipmoc/skewer", - "rel": "/software/repository/github/relipmoc/skewer", - "avatar": "https://avatars.githubusercontent.com/u/7967213?v=4", - "description": "implements the bit-masked k-difference matching algorithm dedicated to the task of adapter trimming. It is specially designed for processing next-generation sequencing (NGS) paired-end sequences.", + "uid": "github/SzokeMark-Andor/AstroDataProcessing", + "url": "https://github.com/SzokeMark-Andor/AstroDataProcessing", + "rel": "/software/repository/github/SzokeMark-Andor/AstroDataProcessing", + "avatar": "https://avatars.githubusercontent.com/u/110973012?v=4", + "description": "This repository contains scripts and tools for analyzing and visualizing astronomical data, specifically targeting the moment-0 maps of NGC 0628 using various methods.", "topics": [] }, { - "uid": "github/YuLab-SMU/treeio", - "url": "https://github.com/YuLab-SMU/treeio", - "rel": "/software/repository/github/YuLab-SMU/treeio", - "avatar": "https://avatars.githubusercontent.com/u/40430016?v=4", - "description": ":seedling: Base Classes and Functions for Phylogenetic Tree Input and Output", + "uid": "github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", + "url": "https://github.com/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", + "rel": "/software/repository/github/SzokeMark-Andor/Chemical-composition-detector-of-Stars-using-spectroscopy", + "avatar": "https://avatars.githubusercontent.com/u/110973012?v=4", + "description": "This project analyzes spectroscopic data to detect helium, oxygen, and heliox in O and B-type stars, neutron stars, and white dwarfs. Using tools like SDSS and Astropy, it provides insights into stellar compositions and evolution through data visualization and analysis.", "topics": [ - "phylogenetic-trees", - "parser", - "exporter", - "exporter", - "parser", - "phylogenetic-trees", - "data-extraction" + "spectroscopy", + "stellar-composition" ] }, { - "uid": "github/deezer/spleeter", - "url": "https://github.com/deezer/spleeter", - "rel": "/software/repository/github/deezer/spleeter", - "avatar": "https://avatars0.githubusercontent.com/u/4393583?v=4", - "description": "Deezer source separation library including pretrained models.", + "uid": "github/ProjectPyRhO/PyRhO", + "url": "https://github.com/ProjectPyRhO/PyRhO", + "rel": "/software/repository/github/ProjectPyRhO/PyRhO", + "avatar": "https://avatars.githubusercontent.com/u/16543743?v=4", + "description": "A virtual optogenetics laboratory", "topics": [ - "deezer", "python", - "tensorflow", - "audio-processing", - "pretrained-models", - "bass", - "drums", - "vocals", - "deep-learning", - "model" + "optogenetics", + "opsin", + "jupyter-widget", + "computational-neuroscience", + "neuron", + "brian2", + "neuroscience", + "brain", + "brainweb" ] }, { - "uid": "github/ilaudy/PIAO", - "url": "https://github.com/ilaudy/PIAO", - "rel": "/software/repository/github/ilaudy/PIAO", - "avatar": "https://avatars.githubusercontent.com/u/3382703?v=4", - "description": "PIAO (\u6f02) is efficient memory-controlled python code using the standard SO algorithm to identify halos.", + "uid": "github/yangyongsan-bio/GREAP", + "url": "https://github.com/yangyongsan-bio/GREAP", + "rel": "/software/repository/github/yangyongsan-bio/GREAP", + "avatar": "https://avatars.githubusercontent.com/u/55840134?v=4", + "description": null, "topics": [] }, { - "uid": "github/kboone/parsnip", - "url": "https://github.com/kboone/parsnip", - "rel": "/software/repository/github/kboone/parsnip", - "avatar": "https://avatars.githubusercontent.com/u/789873?v=4", - "description": "Deep generative modeling of astronomical transient light curves", + "uid": "github/agreenbaum/gsgs", + "url": "https://github.com/agreenbaum/gsgs", + "rel": "/software/repository/github/agreenbaum/gsgs", + "avatar": "https://avatars.githubusercontent.com/u/4885221?v=4", + "description": "gsgs does phase retrieval on images given an estimate of the pupil phase, like one from a non-redundant mask ", "topics": [] }, { - "uid": "github/kboone/avocado", - "url": "https://github.com/kboone/avocado", - "rel": "/software/repository/github/kboone/avocado", - "avatar": "https://avatars.githubusercontent.com/u/789873?v=4", - "description": "Photometric Classification of Astronomical Transients and Variables With Biased Spectroscopic Samples", + "uid": "github/agreenbaum/ImPlaneIA", + "url": "https://github.com/agreenbaum/ImPlaneIA", + "rel": "/software/repository/github/agreenbaum/ImPlaneIA", + "avatar": "https://avatars.githubusercontent.com/u/4885221?v=4", + "description": "Tools for fitting (image plane fringes), calibrating, and analyzing NRM data across multiple instruments and modes", "topics": [] }, { - "uid": "github/franciscovillaescusa/Pylians", - "url": "https://github.com/franciscovillaescusa/Pylians", - "rel": "/software/repository/github/franciscovillaescusa/Pylians", - "avatar": "https://avatars.githubusercontent.com/u/4404316?v=4", - "description": "Libraries to analyze numerical simulations", - "topics": [ - "simulation", - "nbody-simulation", - "power-spectrum", - "density-estimation", - "bispectrum", - "21cm", - "python", - "cython", - "c" - ] + "uid": "github/nnssa/gallumi_public", + "url": "https://github.com/NNSSA/GALLUMI_public", + "rel": "/software/repository/github/nnssa/gallumi_public", + "avatar": "https://avatars.githubusercontent.com/u/33321316?v=4", + "description": "A Galaxy Luminosity Function Pipeline for Cosmology and Astrophysics", + "topics": [] }, { - "uid": "github/franciscovillaescusa/Pylians3", - "url": "https://github.com/franciscovillaescusa/Pylians3", - "rel": "/software/repository/github/franciscovillaescusa/Pylians3", - "avatar": "https://avatars.githubusercontent.com/u/4404316?v=4", - "description": "Libraries to analyze numerical simulations (python3)", - "topics": [ - "simulations", - "n-body", - "hydrodynamics", - "power-spectrum", - "bispectrum", - "correlation-functions", - "voids", - "python3", - "cython", - "c", - "density-estimation", - "visualization" - ] + "uid": "github/dirac-institute/asterogap", + "url": "https://github.com/dirac-institute/asterogap", + "rel": "/software/repository/github/dirac-institute/asterogap", + "avatar": "https://avatars.githubusercontent.com/u/26352004?v=4", + "description": "A Bayesian-based Gaussian Process model set to fit sparsely-sampled asteroid light curves.", + "topics": [] }, { - "uid": "github/illumina/pyflow", - "url": "https://github.com/Illumina/pyflow", - "rel": "/software/repository/github/illumina/pyflow", - "avatar": "https://avatars.githubusercontent.com/u/11462464?v=4", - "description": "A lightweight parallel task engine", - "topics": [ - "workflow", - "workflow-engine", - "task-runner" - ] + "uid": "github/elsner/arkcos", + "url": "https://github.com/elsner/arkcos", + "rel": "/software/repository/github/elsner/arkcos", + "avatar": "https://avatars.githubusercontent.com/u/1218415?v=4", + "description": "Accelerated radial kernel convolution on the sphere", + "topics": [] }, { - "uid": "github/GabrielNakamura/FishPhyloMaker", - "url": "https://github.com/GabrielNakamura/FishPhyloMaker", - "rel": "/software/repository/github/GabrielNakamura/FishPhyloMaker", - "avatar": "https://avatars.githubusercontent.com/u/13869477?v=4", - "description": "Making phylogenies for a list of fish species ", + "uid": "github/SPARC-X/SPARC-X-API", + "url": "https://github.com/SPARC-X/SPARC-X-API", + "rel": "/software/repository/github/SPARC-X/SPARC-X-API", + "avatar": "https://avatars.githubusercontent.com/u/43963198?v=4", + "description": null, "topics": [] }, { - "uid": "github/mikesmitka/truvot", - "url": "https://github.com/mikesmitka/truvot", - "rel": "/software/repository/github/mikesmitka/truvot", - "avatar": "https://avatars.githubusercontent.com/u/13972392?v=4", - "description": null, + "uid": "github/coolneighbors/unwise-verse", + "url": "https://github.com/coolneighbors/unWISE-verse", + "rel": "/software/repository/github/coolneighbors/unwise-verse", + "avatar": "https://avatars.githubusercontent.com/u/90220036?v=4", + "description": "Integrated flipbook / panoptes pipeline", "topics": [] }, { - "uid": "github/martinlackner/abcvoting", - "url": "https://github.com/martinlackner/abcvoting", - "rel": "/software/repository/github/martinlackner/abcvoting", - "avatar": "https://avatars.githubusercontent.com/u/46762723?v=4", - "description": "Python implementations of approval-based committee (multi-winner) voting rules", + "uid": "github/ajeldorado/falco-python", + "url": "https://github.com/ajeldorado/falco-python", + "rel": "/software/repository/github/ajeldorado/falco-python", + "avatar": "https://avatars.githubusercontent.com/u/7228719?v=4", + "description": "Fast Linearized Coronagraph Optimizer (FALCO) in Python 3", + "topics": [] + }, + { + "uid": "github/ajeldorado/falco-matlab", + "url": "https://github.com/ajeldorado/falco-matlab", + "rel": "/software/repository/github/ajeldorado/falco-matlab", + "avatar": "https://avatars.githubusercontent.com/u/7228719?v=4", + "description": "Fast Linearized Coronagraph Optimizer (FALCO) in MATLAB", + "topics": [] + }, + { + "uid": "github/Qiskit/rustworkx", + "url": "https://github.com/Qiskit/rustworkx", + "rel": "/software/repository/github/Qiskit/rustworkx", + "avatar": "https://avatars.githubusercontent.com/u/30696987?v=4", + "description": "A high performance Python graph library implemented in Rust.", "topics": [ - "voting", + "graph", + "dag", + "rust", "python", - "research", - "social-choice", - "social-choice-theory", - "multiwinnervoting", - "approval-voting", - "voting-methods", - "committee" + "graph-theory", + "hacktoberfest" ] }, { - "uid": "github/bessagroup/f3dasm", - "url": "https://github.com/bessagroup/f3dasm", - "rel": "/software/repository/github/bessagroup/f3dasm", - "avatar": "https://avatars.githubusercontent.com/u/64279108?v=4", - "description": "Framework for Data-Driven Design & Analysis of Structures & Materials (F3DASM)", + "uid": "github/Qiskit/qiskit-experiments", + "url": "https://github.com/Qiskit/qiskit-experiments", + "rel": "/software/repository/github/Qiskit/qiskit-experiments", + "avatar": "https://avatars.githubusercontent.com/u/30696987?v=4", + "description": "Qiskit Experiments", "topics": [ - "data-driven", - "machine-learning", - "computational-mechanics", - "design-of-experiments", - "framework", - "materials-science" + "qiskit" ] }, { - "uid": "github/ManuelRausch/StatConfR", - "url": "https://github.com/ManuelRausch/StatConfR", - "rel": "/software/repository/github/ManuelRausch/StatConfR", - "avatar": "https://avatars.githubusercontent.com/u/114725315?v=4", - "description": "Development of an R package for metacognition researchers", + "uid": "github/deepskies/DeepBench", + "url": "https://github.com/deepskies/DeepBench", + "rel": "/software/repository/github/deepskies/DeepBench", + "avatar": "https://avatars.githubusercontent.com/u/30120253?v=4", + "description": "Simulation library for very simple simulations to benchmark machine learning algorithms", "topics": [ - "cognitive-modeling", - "information-theory", - "metacognition", - "signal-detection-theory" + "benchmark", + "simulation" ] }, { - "uid": "github/geopandas/geopandas", - "url": "https://github.com/geopandas/geopandas", - "rel": "/software/repository/github/geopandas/geopandas", - "avatar": "https://avatars2.githubusercontent.com/u/8130715?v=4", - "description": "Python tools for geographic data", + "uid": "github/deepskies/deeplenstronomy", + "url": "https://github.com/deepskies/deeplenstronomy", + "rel": "/software/repository/github/deepskies/deeplenstronomy", + "avatar": "https://avatars.githubusercontent.com/u/30120253?v=4", + "description": "A pipeline for versatile strong lens sample simulations", "topics": [] }, { - "uid": "github/pscicluna/precision", - "url": "https://github.com/pscicluna/precision", - "rel": "/software/repository/github/pscicluna/precision", - "avatar": "https://avatars.githubusercontent.com/u/509178?v=4", - "description": "A python pipeline to reduce astronomical IR imaging data. Written with SPHERE data in mind, it provides a fast and easy reduction of bright sources suitable for science. While it may not extract the absolute maximum amount of science, the objective is to provide a means to get science-ready data with minimal computing time or human interaction. Development is ongoing.", - "topics": [] + "uid": "github/fbreitwieser/krakenuniq", + "url": "https://github.com/fbreitwieser/krakenuniq", + "rel": "/software/repository/github/fbreitwieser/krakenuniq", + "avatar": "https://avatars.githubusercontent.com/u/516060?v=4", + "description": "\ud83d\udc19 KrakenUniq: Metagenomics classifier with unique k-mer counting for more specific results", + "topics": [ + "bioinformatics", + "metagenomics" + ] }, { - "uid": "github/FredHutch/SEACR", - "url": "https://github.com/FredHutch/SEACR", - "rel": "/software/repository/github/FredHutch/SEACR", - "avatar": "https://avatars.githubusercontent.com/u/1427766?v=4", - "description": "SEACR: Sparse Enrichment Analysis for CUT&RUN", + "uid": "github/lab-medvedeva/GADES-main", + "url": "https://github.com/lab-medvedeva/GADES-main", + "rel": "/software/repository/github/lab-medvedeva/GADES-main", + "avatar": "https://avatars.githubusercontent.com/u/79700862?v=4", + "description": null, "topics": [] }, { - "uid": "github/dzesmin/TEA", - "url": "https://github.com/dzesmin/TEA", - "rel": "/software/repository/github/dzesmin/TEA", - "avatar": "https://avatars.githubusercontent.com/u/3043106?v=4", - "description": "Thermochemical Equilibrium Abundances (TEA), a code to calculate gaseous molecular abundances under thermochemical equilibrium conditions", + "uid": "github/HorvathLab/ReQTL", + "url": "https://github.com/HorvathLab/ReQTL", + "rel": "/software/repository/github/HorvathLab/ReQTL", + "avatar": "https://avatars0.githubusercontent.com/u/15271573?v=4", + "description": "ReQTL: Identifying correlations between expressed SNVs and gene expression using RNA-sequencing data", "topics": [] }, { - "uid": "github/blobtoolkit/viewer", - "url": "https://github.com/blobtoolkit/viewer", - "rel": "/software/repository/github/blobtoolkit/viewer", - "avatar": "https://avatars.githubusercontent.com/u/29755752?v=4", - "description": "[Archived] BlobToolKit API and viewer code", + "uid": "github/pirovc/ganon_benchmark", + "url": "https://github.com/pirovc/ganon_benchmark", + "rel": "/software/repository/github/pirovc/ganon_benchmark", + "avatar": "https://avatars.githubusercontent.com/u/4673375?v=4", + "description": "benchmarking scripts for ganon", "topics": [] }, { - "uid": "github/thom991/MSIQuickView", - "url": "https://github.com/thom991/MSIQuickView", - "rel": "/software/repository/github/thom991/MSIQuickView", - "avatar": "https://avatars.githubusercontent.com/u/10854661?v=4", - "description": null, + "uid": "github/ChrisBeaumont/brut", + "url": "https://github.com/ChrisBeaumont/brut", + "rel": "/software/repository/github/ChrisBeaumont/brut", + "avatar": "https://avatars.githubusercontent.com/u/796752?v=4", + "description": "Machine Learning on the Milky Way Project DR1", "topics": [] }, { - "uid": "github/arup-group/pam", - "url": "https://github.com/arup-group/pam", - "rel": "/software/repository/github/arup-group/pam", - "avatar": "https://avatars.githubusercontent.com/u/59966781?v=4", - "description": "Generate and modify transport demand scenarios via a Python API.", - "topics": [ - "cml", - "transit", - "arup", - "city-modelling", - "city-modelling-lab" - ] - }, - { - "uid": "github/MichelleLochner/astronomaly", - "url": "https://github.com/MichelleLochner/astronomaly", - "rel": "/software/repository/github/MichelleLochner/astronomaly", - "avatar": "https://avatars.githubusercontent.com/u/6876163?v=4", - "description": "A flexible framework for anomaly detection in astronomy.", + "uid": "github/potree/PotreeConverter", + "url": "https://github.com/potree/PotreeConverter", + "rel": "/software/repository/github/potree/PotreeConverter", + "avatar": "https://avatars2.githubusercontent.com/u/2094934?v=4", + "description": "Create multi res point cloud to use with potree", "topics": [] }, { - "uid": "github/SirSharpest/NarrowEscapeSimulator", - "url": "https://github.com/AoifeHughes/NarrowEscapeSimulator", - "rel": "/software/repository/github/SirSharpest/NarrowEscapeSimulator", - "avatar": "https://avatars.githubusercontent.com/u/10923695?v=4", - "description": "Developed during my PhD at the John Innes Centre (Norwich Research Park, Doctoral Training Programme). ", + "uid": "github/seahorce-scidac/REMORA", + "url": "https://github.com/seahorce-scidac/REMORA", + "rel": "/software/repository/github/seahorce-scidac/REMORA", + "avatar": "https://avatars.githubusercontent.com/u/111521647?v=4", + "description": "A GPU-enabled version of ROMS", "topics": [ - "biophysics", - "simulations", - "particle", - "python" + "amrex" ] }, { - "uid": "github/LucaJRossi/NIGO", - "url": "https://github.com/LucaJRossi/NIGO", - "rel": "/software/repository/github/LucaJRossi/NIGO", - "avatar": "https://avatars.githubusercontent.com/u/10393911?v=4", - "description": "NIGO: a Numerical Integrator of Galactic Orbits", + "uid": "github/florpi/sunbird", + "url": "https://github.com/florpi/sunbird", + "rel": "/software/repository/github/florpi/sunbird", + "avatar": "https://avatars.githubusercontent.com/u/15879020?v=4", + "description": "COsmOlogical inference with dEnsity Split cluStering", "topics": [] }, { - "uid": "github/iobio-zjut/IPTDFold", - "url": "https://github.com/iobio-zjut/IPTDFold", - "rel": "/software/repository/github/iobio-zjut/IPTDFold", - "avatar": "https://avatars.githubusercontent.com/u/43274315?v=4", - "description": "A de novo protein structure prediction by iterative partition sampling, topology adjustment, and residue-level distance deviation optimization", - "topics": [] + "uid": "github/theislab/scCODA", + "url": "https://github.com/theislab/scCODA", + "rel": "/software/repository/github/theislab/scCODA", + "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", + "description": "A Bayesian model for compositional single-cell data analysis", + "topics": [ + "tensorflow", + "compositional-changes", + "statistical-analysis", + "single-cell-rna-seq" + ] }, { - "uid": "github/liushang17/AEnet", - "url": "https://github.com/liushang17/AEnet", - "rel": "/software/repository/github/liushang17/AEnet", - "avatar": "https://avatars.githubusercontent.com/u/34593951?v=4", - "description": "This study constructs two new methods to study alternative splicing events at the single-cell level, namely DESJ-detection and AEN. DESJ-detection can detect alternative splicing differences at the single-cell level. AEN can not only systematically analyze the relationship between alternative splicing events and cell states, but also detect alternative splicing events in the process of cell state changes. At the same time, AEN also optimized the ability of DESJ-detection to detect differential alternative splicing.", - "topics": [] + "uid": "github/theislab/scanpy", + "url": "https://github.com/scverse/scanpy", + "rel": "/software/repository/github/theislab/scanpy", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "Single-cell analysis in Python. Scales to >1M cells.", + "topics": [ + "machine-learning", + "data-science", + "visualize-data", + "transcriptomics", + "bioinformatics", + "scanpy", + "anndata", + "python", + "scverse" + ] }, { - "uid": "github/alphaparrot/ExoPlaSim", - "url": "https://github.com/alphaparrot/ExoPlaSim", - "rel": "/software/repository/github/alphaparrot/ExoPlaSim", - "avatar": "https://avatars.githubusercontent.com/u/14878016?v=4", - "description": "Exoplanet Planet Simulator (PlaSim extended for different planet types (including tidally-locked) and evolution on geological timescales--glaciers and carbon cycle)", + "uid": "github/theislab/scvelo", + "url": "https://github.com/theislab/scvelo", + "rel": "/software/repository/github/theislab/scvelo", + "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", + "description": "RNA Velocity generalized through dynamical modeling", "topics": [] }, { - "uid": "github/HUPO-PSI/mzspeclib-py", - "url": "https://github.com/HUPO-PSI/mzspeclib-py", - "rel": "/software/repository/github/HUPO-PSI/mzspeclib-py", - "avatar": "https://avatars.githubusercontent.com/u/11966779?v=4", - "description": "A python reference implementation of the mzSpecLib spectral library format", - "topics": [] + "uid": "github/theislab/cellrank", + "url": "https://github.com/theislab/cellrank", + "rel": "/software/repository/github/theislab/cellrank", + "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", + "description": "CellRank: dynamics from multi-view single-cell data", + "topics": [ + "machine-learning", + "single-cell-rna-seq", + "bioinformatics", + "rna-velocity", + "markov-chains", + "genetics", + "data-science", + "fuzzy-clustering-analyses", + "manifold-learning", + "single-cell-genomics", + "trajectory-generation", + "cell-fate-transitions", + "cell-fate-determination" + ] }, { - "uid": "github/lorenzo-rovigatti/oxDNA", - "url": "https://github.com/lorenzo-rovigatti/oxDNA", - "rel": "/software/repository/github/lorenzo-rovigatti/oxDNA", - "avatar": "https://avatars.githubusercontent.com/u/68116?v=4", - "description": "A new version of the code to simulate the oxDNA/oxRNA models, now equipped with Python bindings", + "uid": "github/theislab/anndata", + "url": "https://github.com/scverse/anndata", + "rel": "/software/repository/github/theislab/anndata", + "avatar": "https://avatars.githubusercontent.com/u/95305807?v=4", + "description": "Annotated data.", "topics": [ - "simulation", - "physics-simulation", - "dna" + "scanpy", + "data-science", + "transcriptomics", + "bioinformatics", + "machine-learning", + "scverse" ] }, { - "uid": "github/isoverse/isoreader", - "url": "https://github.com/isoverse/isoreader", - "rel": "/software/repository/github/isoverse/isoreader", - "avatar": "https://avatars.githubusercontent.com/u/47226588?v=4", - "description": "Read IRMS (Isotope Ratio Mass Spectrometry) data files into R", + "uid": "github/theislab/anndata2ri", + "url": "https://github.com/theislab/anndata2ri", + "rel": "/software/repository/github/theislab/anndata2ri", + "avatar": "https://avatars.githubusercontent.com/u/22319415?v=4", + "description": "Convert between AnnData and SingleCellExperiment", "topics": [ - "r", - "data", - "isotopes", - "geochemistry", - "ecology" + "scanpy", + "single-cell", + "bioconductor", + "jupyter", + "rpy2" ] }, { - "uid": "github/JPenuchot/ctbench", - "url": "https://github.com/JPenuchot/ctbench", - "rel": "/software/repository/github/JPenuchot/ctbench", - "avatar": "https://avatars.githubusercontent.com/u/852191?v=4", - "description": "Compiler-assisted variable size benchmarking for the study of C++ metaprogram compile times.", + "uid": "github/Ecos-platform/ecos", + "url": "https://github.com/Ecos-platform/ecos", + "rel": "/software/repository/github/Ecos-platform/ecos", + "avatar": "https://avatars.githubusercontent.com/u/89104260?v=4", + "description": "A simple, fast and easy to use co-simulation engine.", "topics": [ - "clang", - "benchmark", - "metaprogramming", - "gcc", - "compilation", - "data-analysis", - "data-visualization" + "co-simulation", + "fmi-standard", + "ssp-standard", + "command-line-tool", + "cpp20", + "fmi2", + "fmi3", + "python3", + "fmi1" ] }, { - "uid": "github/Trybnetic/paat", - "url": "https://github.com/Trybnetic/paat", - "rel": "/software/repository/github/Trybnetic/paat", - "avatar": "https://avatars.githubusercontent.com/u/7532062?v=4", - "description": "The physical activity analysis toolbox (PAAT) is a comprehensive toolbox to analyse raw acceleration data from the hip.", + "uid": "github/dealii/dealii", + "url": "https://github.com/dealii/dealii", + "rel": "/software/repository/github/dealii/dealii", + "avatar": "https://avatars.githubusercontent.com/u/7506070?v=4", + "description": "The development repository for the deal.II finite element library.", "topics": [ - "physical-activity", - "actigraphy", - "actigraph", - "accelerometry", - "hip" + "finite-elements", + "c-plus-plus" ] }, - { - "uid": "github/luinix/pesco", - "url": "https://github.com/luinix/pesco", - "rel": "/software/repository/github/luinix/pesco", - "avatar": "https://avatars.githubusercontent.com/u/832161?v=4", - "description": "Cognitive stimulation tool for elderly or cognitively impaired", - "topics": [] - }, { "uid": "github/harvard-nrg/scanbuddy", "url": "https://github.com/harvard-nrg/scanbuddy", @@ -75956,1484 +76234,1454 @@ "topics": [] }, { - "uid": "github/gasparl/possa", - "url": "https://github.com/gasparl/possa", - "rel": "/software/repository/github/gasparl/possa", - "avatar": "https://avatars.githubusercontent.com/u/37374850?v=4", - "description": "POSSA: Power simulation for sequential analyses and multiple hypotheses.", + "uid": "github/guaix-ucm/megaradrp", + "url": "https://github.com/guaix-ucm/megaradrp", + "rel": "/software/repository/github/guaix-ucm/megaradrp", + "avatar": "https://avatars.githubusercontent.com/u/10961186?v=4", + "description": "MEGARA (Multi-Espectr\u00f3grafo en GTC de Alta Resoluci\u00f3n para Astronom\u00eda) is a facility instrument designed for the 10.4m GTC telescope in La Palma (Spain). ", "topics": [ - "multiple-testing", - "r", - "r-pkg", - "sequential-analyses", - "sequential-design", - "statistical-analysis" + "astronomy", + "astrophysics" ] }, { - "uid": "github/Ashod/garli", - "url": "https://github.com/Ashod/garli", - "rel": "/software/repository/github/Ashod/garli", - "avatar": "https://avatars.githubusercontent.com/u/746119?v=4", - "description": "Phylogenetic analysis of molecular sequence data using the maximum-likelihood criterion", - "topics": [] + "uid": "github/guaix-ucm/numina", + "url": "https://github.com/guaix-ucm/numina", + "rel": "/software/repository/github/guaix-ucm/numina", + "avatar": "https://avatars.githubusercontent.com/u/10961186?v=4", + "description": "Astronomical data reduction package", + "topics": [ + "python", + "astronomy", + "science" + ] }, { - "uid": "github/computational-metabolomics/msnpy", - "url": "https://github.com/computational-metabolomics/msnpy", - "rel": "/software/repository/github/computational-metabolomics/msnpy", - "avatar": "https://avatars.githubusercontent.com/u/20993922?v=4", - "description": "Python package for processing and annotation of MSn fragmentation data", + "uid": "github/Stat-Cook/deident", + "url": "https://github.com/Stat-Cook/deident", + "rel": "/software/repository/github/Stat-Cook/deident", + "avatar": "https://avatars.githubusercontent.com/u/51404549?v=4", + "description": null, "topics": [] }, { - "uid": "github/computational-metabolomics/dimspy", - "url": "https://github.com/computational-metabolomics/dimspy", - "rel": "/software/repository/github/computational-metabolomics/dimspy", - "avatar": "https://avatars.githubusercontent.com/u/20993922?v=4", - "description": "Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data", - "topics": [ - "metabolomics", - "mass-spectrometry", - "dims", - "untargeted-metabolomics", - "raw", - "mzml" - ] + "uid": "github/SALT-NIRWALS/nirwals", + "url": "https://github.com/SALT-NIRWALS/nirwals", + "rel": "/software/repository/github/SALT-NIRWALS/nirwals", + "avatar": "https://avatars.githubusercontent.com/u/95205451?v=4", + "description": null, + "topics": [] }, { - "uid": "github/dunhamlab/PacRAT", - "url": "https://github.com/dunhamlab/PacRAT", - "rel": "/software/repository/github/dunhamlab/PacRAT", - "avatar": "https://avatars.githubusercontent.com/u/40642004?v=4", - "description": "Improving long-read barcode-variant mapping using multiple sequence alignment. ", - "topics": [ - "bioinformatics", - "pacbio", - "multiple-sequence-alignment" - ] + "uid": "github/EoRImaging/FHD", + "url": "https://github.com/EoRImaging/FHD", + "rel": "/software/repository/github/EoRImaging/FHD", + "avatar": "https://avatars.githubusercontent.com/u/18563618?v=4", + "description": "Fast Holographic Deconvolution", + "topics": [] }, { - "uid": "github/circuitgraph/circuitgraph", - "url": "https://github.com/circuitgraph/circuitgraph", - "rel": "/software/repository/github/circuitgraph/circuitgraph", - "avatar": "https://avatars1.githubusercontent.com/u/68197630?v=4", - "description": "Tools for working with circuits as graphs in python", + "uid": "github/BioComputingUP/ring-pymol", + "url": "https://github.com/BioComputingUP/ring-pymol", + "rel": "/software/repository/github/BioComputingUP/ring-pymol", + "avatar": "https://avatars.githubusercontent.com/u/7839689?v=4", + "description": "This is the public repository for the RING PyMOL plugin developed by the BioComputing UP laboratory at the University of Padua", "topics": [ - "python", - "boolean-circuits", - "satisfiability", - "netlist", - "graphs", - "eda" + "bioinformatics", + "pymol", + "plugin" ] }, { - "uid": "github/galaxyecology/tools-ecology", - "url": "https://github.com/galaxyecology/tools-ecology", - "rel": "/software/repository/github/galaxyecology/tools-ecology", - "avatar": "https://avatars.githubusercontent.com/u/46970847?v=4", - "description": "Galaxy Tools maintained and developed by the GalaxyE community", - "topics": [ - "galaxy", - "ecology", - "pndb" - ] + "uid": "github/uwsbel/low-fidelity-dynamic-models", + "url": "https://github.com/uwsbel/low-fidelity-dynamic-models", + "rel": "/software/repository/github/uwsbel/low-fidelity-dynamic-models", + "avatar": "https://avatars.githubusercontent.com/u/2575255?v=4", + "description": "A library of fast and accurate low fidelity dynamic models for applications in robotics", + "topics": [] }, { - "uid": "github/shishirdholakia/eclipsoid", - "url": "https://github.com/shishirdholakia/eclipsoid", - "rel": "/software/repository/github/shishirdholakia/eclipsoid", - "avatar": "https://avatars.githubusercontent.com/u/38153050?v=4", - "description": "Transit models for ellipsoidal planets in Jax", + "uid": "github/DeepMIALab/UC-NfNet", + "url": "https://github.com/DeepMIALab/UC-NfNet", + "rel": "/software/repository/github/DeepMIALab/UC-NfNet", + "avatar": "https://avatars.githubusercontent.com/u/82269830?v=4", + "description": null, "topics": [] }, { - "uid": "github/Novartis/torchsurv", - "url": "https://github.com/Novartis/torchsurv", - "rel": "/software/repository/github/Novartis/torchsurv", - "avatar": "https://avatars.githubusercontent.com/u/6154715?v=4", - "description": "Deep survival analysis made easy ", + "uid": "github/GilbertLabUCSF/CanDI", + "url": "https://github.com/GilbertLabUCSF/CanDI", + "rel": "/software/repository/github/GilbertLabUCSF/CanDI", + "avatar": "https://avatars.githubusercontent.com/u/81225660?v=4", + "description": "CanDI - A global cancer data integrator", "topics": [ - "pytorch", - "survival-analysis", - "deep-learning" + "cancer-research", + "database", + "depmap" ] }, { - "uid": "github/firefly-cpp/NiaARM", - "url": "https://github.com/firefly-cpp/NiaARM", - "rel": "/software/repository/github/firefly-cpp/NiaARM", - "avatar": "https://avatars.githubusercontent.com/u/1633361?v=4", - "description": "A minimalistic framework for Numerical Association Rule Mining", - "topics": [ - "data-science", - "data-mining", - "association-rules", - "association-rule-mining", - "evolutionary-algorithms", - "swarm-intelligence" - ] + "uid": "github/kboone/parsnip", + "url": "https://github.com/kboone/parsnip", + "rel": "/software/repository/github/kboone/parsnip", + "avatar": "https://avatars.githubusercontent.com/u/789873?v=4", + "description": "Deep generative modeling of astronomical transient light curves", + "topics": [] }, { - "uid": "github/shandley/hecatomb", - "url": "https://github.com/shandley/hecatomb", - "rel": "/software/repository/github/shandley/hecatomb", - "avatar": "https://avatars.githubusercontent.com/u/660111?v=4", - "description": "hecatomb is a virome analysis pipeline for analysis of Illumina sequence data", + "uid": "github/kboone/avocado", + "url": "https://github.com/kboone/avocado", + "rel": "/software/repository/github/kboone/avocado", + "avatar": "https://avatars.githubusercontent.com/u/789873?v=4", + "description": "Photometric Classification of Astronomical Transients and Variables With Biased Spectroscopic Samples", + "topics": [] + }, + { + "uid": "github/nlesc-dirac/sagecal", + "url": "https://github.com/nlesc-dirac/sagecal", + "rel": "/software/repository/github/nlesc-dirac/sagecal", + "avatar": "https://avatars0.githubusercontent.com/u/26144311?v=4", + "description": "SAGECal is a very fast, memory efficient and GPU accelerated radio interferometric calibration program. It supports all source models including points, Gaussians and Shapelets. Distributed calibration using MPI and consensus optimization is enabled. Tools to build/restore sky models are included.", "topics": [ - "virome", - "viral-metagenomes", - "snakemake" + "lofar", + "ska", + "calibration", + "admm", + "cuda", + "nonlinear-optimization", + "radio-astronomy" ] }, { - "uid": "github/Danko-Lab/dREG", - "url": "https://github.com/Danko-Lab/dREG", - "rel": "/software/repository/github/Danko-Lab/dREG", - "avatar": "https://avatars.githubusercontent.com/u/6503971?v=4", - "description": "Detecting Regulatory Elements using GRO-seq and PRO-seq", + "uid": "github/felixchenier/kineticstoolkit", + "url": "https://github.com/felixchenier/kineticstoolkit", + "rel": "/software/repository/github/felixchenier/kineticstoolkit", + "avatar": "https://avatars.githubusercontent.com/u/34967663?v=4", + "description": "Kinetics Toolkit is an open-source, pure-python package of integrated classes and functions that aims to facilitate research in biomechanics using python.", "topics": [ - "gene-regulation", - "gro-seq", - "pro-seq", - "chro-seq", - "transcription-regulatory-elements" + "biomechanics", + "kinematics", + "toolbox", + "api", + "python", + "kinetics" ] }, { - "uid": "github/AstroVPK/kali", - "url": "https://github.com/AstroVPK/kali", - "rel": "/software/repository/github/AstroVPK/kali", - "avatar": "https://avatars.githubusercontent.com/u/11365671?v=4", - "description": "A library to model a time series as a Continuous-time ARMA process", + "uid": "github/dzesmin/TEA", + "url": "https://github.com/dzesmin/TEA", + "rel": "/software/repository/github/dzesmin/TEA", + "avatar": "https://avatars.githubusercontent.com/u/3043106?v=4", + "description": "Thermochemical Equilibrium Abundances (TEA), a code to calculate gaseous molecular abundances under thermochemical equilibrium conditions", "topics": [] }, { - "uid": "github/agsreejith/CONTROL", - "url": "https://github.com/agsreejith/CONTROL", - "rel": "/software/repository/github/agsreejith/CONTROL", - "avatar": "https://avatars.githubusercontent.com/u/32366864?v=4", - "description": "V1.0 of CUTE data reduction pipeline", + "uid": "github/pwry/lextes", + "url": "https://github.com/pwry/lextes", + "rel": "/software/repository/github/pwry/lextes", + "avatar": "https://avatars.githubusercontent.com/u/31188957?v=4", + "description": "PDF link scraper/tester for Schroedinger's Code paper", "topics": [] }, { - "uid": "github/panoptes/POCS", - "url": "https://github.com/panoptes/POCS", - "rel": "/software/repository/github/panoptes/POCS", - "avatar": "https://avatars.githubusercontent.com/u/5598632?v=4", - "description": "An Observatory Control System for the PANOPTES citizen-science project designed to help find transiting exoplanets! :telescope: :stars:", + "uid": "github/czbiohub-sf/Rapid-QC-MS", + "url": "https://github.com/czbiohub-sf/Rapid-QC-MS", + "rel": "/software/repository/github/czbiohub-sf/Rapid-QC-MS", + "avatar": "https://avatars.githubusercontent.com/u/28747162?v=4", + "description": "Realtime quality control for mass spectrometry data acquisition", "topics": [ - "exoplantes", - "astronomy", - "telescopes", - "python", - "panoptes", - "citizen-science" + "mass-spectrometry", + "plotly-dash", + "metabolomics" ] }, { - "uid": "github/timoast/signac", - "url": "https://github.com/timoast/signac", - "rel": "/software/repository/github/timoast/signac", - "avatar": "https://avatars2.githubusercontent.com/u/4591688?v=4", - "description": "R toolkit for the analysis of single-cell chromatin data", + "uid": "github/sonny-harman/snowball", + "url": "https://github.com/sonny-harman/snowball", + "rel": "/software/repository/github/sonny-harman/snowball", + "avatar": "https://avatars.githubusercontent.com/u/5854292?v=4", + "description": "Generalizable atmospheric mass loss calculator", + "topics": [] + }, + { + "uid": "github/bcjaeger/aorsf", + "url": "https://github.com/ropensci/aorsf", + "rel": "/software/repository/github/bcjaeger/aorsf", + "avatar": "https://avatars.githubusercontent.com/u/1200269?v=4", + "description": "Accelerated Oblique Random Survival Forests", "topics": [ - "single-cell", - "bioinformatics", - "atac" + "rstats", + "data-science", + "oblique", + "random-forest", + "survival" ] }, { - "uid": "github/vallima/PRyMordial", - "url": "https://github.com/vallima/PRyMordial", - "rel": "/software/repository/github/vallima/PRyMordial", - "avatar": "https://avatars.githubusercontent.com/u/2189782?v=4", - "description": "A Python package for precise computations of BBN within and beyond the Standard Model", + "uid": "gitlab/gims-developers/gims", + "url": "https://gitlab.com/gims-developers/gims", + "rel": "/software/repository/gitlab/gims-developers/gims", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/16358286/GIMSLogo.png", + "description": "GIMS -- Graphical Interface for Materials Simulations -- is an open-source, browser-based toolbox for electronic structure codes. Try it here: [gims.ms1p.org](https://gims.ms1p.org)", "topics": [] }, { - "uid": "github/peterjc/galaxy_blast", - "url": "https://github.com/peterjc/galaxy_blast", - "rel": "/software/repository/github/peterjc/galaxy_blast", - "avatar": "https://avatars.githubusercontent.com/u/63959?v=4", - "description": "Galaxy wrappers for NCBI BLAST+ and related BLAST tools.", + "uid": "gitlab/vibes-developers/vibes", + "url": "https://gitlab.com/vibes-developers/vibes", + "rel": "/software/repository/gitlab/vibes-developers/vibes", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/19053725/FV_green.png", + "description": "[FHI-vibes](https://vibes-developers.gitlab.io/vibes/): Vibrational simulations with python powered by ASE and FHI-aims.", "topics": [] }, { - "uid": "github/ysekig/GPMsDB-dbtk", - "url": "https://github.com/ysekig/GPMsDB-dbtk", - "rel": "/software/repository/github/ysekig/GPMsDB-dbtk", - "avatar": "https://avatars.githubusercontent.com/u/120002055?v=4", - "description": "toolkits for GPMsDB-tk to modify its database with user-provided bacterial and archaeal genome/metagenome-assembled genome (MAG) sequences", + "uid": "gitlab/jerrytheo16/exoplanet", + "url": "https://gitlab.com/jerrytheo16/exoplanet", + "rel": "/software/repository/gitlab/jerrytheo16/exoplanet", + "avatar": "https://gitlab.comNone", + "description": "Desktop-based application to aid in constructing a machine learning model for predictive analysis. The application further allows the model to be evaluated through statistical results and interactive graphs.", "topics": [] }, { - "uid": "github/ysekig/GPMsDB-tk", - "url": "https://github.com/ysekig/GPMsDB-tk", - "rel": "/software/repository/github/ysekig/GPMsDB-tk", - "avatar": "https://avatars.githubusercontent.com/u/120002055?v=4", - "description": "Genomically predicted protein mass database (GPMsDB) toolkits for assigning taxonomic identification of bacterial and archaeal cells with user-provided MALDI-TOF mass spectrometry profiles", + "uid": "gitlab/programgreg/tagginglatencyestimator", + "url": "https://gitlab.com/programgreg/tagginglatencyestimator", + "rel": "/software/repository/gitlab/programgreg/tagginglatencyestimator", + "avatar": "https://gitlab.comNone", + "description": "Software to estimate the latency of the tagging process.", "topics": [] }, { - "uid": "github/rpetit3/fastq-dl", - "url": "https://github.com/rpetit3/fastq-dl", - "rel": "/software/repository/github/rpetit3/fastq-dl", - "avatar": "https://avatars.githubusercontent.com/u/5334269?v=4", - "description": "Download FASTQ files from SRA or ENA repositories.", + "uid": "gitlab/fduchate/predihood", + "url": "https://gitlab.com/fduchate/predihood", + "rel": "/software/repository/gitlab/fduchate/predihood", + "avatar": "https://gitlab.comNone", + "description": "", "topics": [] }, { - "uid": "github/rpetit3/fastq-scan", - "url": "https://github.com/rpetit3/fastq-scan", - "rel": "/software/repository/github/rpetit3/fastq-scan", - "avatar": "https://avatars.githubusercontent.com/u/5334269?v=4", - "description": "Output FASTQ summary statistics in JSON format", + "uid": "gitlab/pyFBS/pyFBS", + "url": "https://gitlab.com/pyFBS/pyFBS", + "rel": "/software/repository/gitlab/pyFBS/pyFBS", + "avatar": "https://gitlab.comNone", + "description": "A Python package for Frequency Based Substructuring and Transfer Path Analysis", + "topics": [ + "3D Viewer", + "FRF synthetisation", + "MCK model", + "System Equivalent Modal Mixing", + "Virtual Point Transformation" + ] + }, + { + "uid": "gitlab/polmag/PORTA", + "url": "https://gitlab.com/polmag/PORTA", + "rel": "/software/repository/gitlab/polmag/PORTA", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12210898/porta-logo-bw.png", + "description": "PORTA: A three-dimensional multilevel radiative transfer code for modeling the intensity and polarization of spectral lines with massively parallel computers", "topics": [] }, { - "uid": "github/martenlourens/SHARC", - "url": "https://github.com/martenlourens/SHARC", - "rel": "/software/repository/github/martenlourens/SHARC", - "avatar": "https://avatars.githubusercontent.com/u/14141310?v=4", - "description": "A Python library for performing local gradient clustering (LGC) based SHArpened dimensionality Reduction (SDR) and Classification.", + "uid": "gitlab/polmag/P-CORONA", + "url": "https://gitlab.com/polmag/P-CORONA", + "rel": "/software/repository/gitlab/polmag/P-CORONA", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/33519237/out.png", + "description": "P-CORONA is a novel computer program for modeling the intensity and polarization of coronal atomic lines in any given three dimensional (3D) model of the solar corona.", "topics": [] }, { - "uid": "github/martenlourens/pySDR", - "url": "https://github.com/martenlourens/pySDR", - "rel": "/software/repository/github/martenlourens/pySDR", - "avatar": "https://avatars.githubusercontent.com/u/14141310?v=4", - "description": "A Python library for performing local gradient clustering (LGC) based sharpened dimensionality reduction (SDR).", + "uid": "gitlab/treangenlab/emu", + "url": "https://gitlab.com/treangenlab/emu", + "rel": "/software/repository/gitlab/treangenlab/emu", + "avatar": "https://gitlab.com/treangenlab/emu/-/avatar", + "description": "EMu is a relative abundance estimator for 16S genomic sequences", "topics": [] }, { - "uid": "github/vsquicciarini/madys", - "url": "https://github.com/vsquicciarini/madys", - "rel": "/software/repository/github/vsquicciarini/madys", - "avatar": "https://avatars.githubusercontent.com/u/78115109?v=4", - "description": "MADYS: isochronal parameter determination for young stellar and substellar objects", - "topics": [ - "astronomy", - "direct-imaging", - "gaia", - "model-comparison", - "parameter-estimation", - "python", - "sql", - "stellar-astrophysics" - ] + "uid": "gitlab/treangenlab/vulcan", + "url": "https://gitlab.com/treangenlab/vulcan", + "rel": "/software/repository/gitlab/treangenlab/vulcan", + "avatar": "https://gitlab.comNone", + "description": "", + "topics": [] }, { - "uid": "github/sevimcengiz/Oryx-MRSI", - "url": "https://github.com/sevimcengiz/Oryx-MRSI", - "rel": "/software/repository/github/sevimcengiz/Oryx-MRSI", - "avatar": "https://avatars.githubusercontent.com/u/5468765?v=4", + "uid": "gitlab/groimp-plugins/Pointcloud", + "url": "https://gitlab.com/groimp-plugins/pointcloud", + "rel": "/software/repository/gitlab/groimp-plugins/Pointcloud", + "avatar": "https://gitlab.comNone", "description": null, "topics": [] }, { - "uid": "github/Lindt8/PHITS-Tools", - "url": "https://github.com/Lindt8/PHITS-Tools", - "rel": "/software/repository/github/Lindt8/PHITS-Tools", - "avatar": "https://avatars.githubusercontent.com/u/7330668?v=4", - "description": "Python package for parsing and post-processing output from the PHITS code ", + "uid": "gitlab/andrea-tango/ficos", + "url": "https://gitlab.com/andrea-tango/ficos", + "rel": "/software/repository/gitlab/andrea-tango/ficos", + "avatar": "https://gitlab.comNone", + "description": "", "topics": [] }, { - "uid": "github/yogi-tud/space_gpu", - "url": "https://github.com/yogi-tud/space_gpu", - "rel": "/software/repository/github/yogi-tud/space_gpu", - "avatar": "https://avatars.githubusercontent.com/u/6371841?v=4", - "description": null, + "uid": "gitlab/german.tischler/libmaus2", + "url": "https://gitlab.com/german.tischler/libmaus2", + "rel": "/software/repository/gitlab/german.tischler/libmaus2", + "avatar": "https://gitlab.comNone", + "description": "collection of data structures and algorithms", "topics": [] }, { - "uid": "github/cgarraffo/StelNet", - "url": "https://github.com/cgarraffo/StelNet", - "rel": "/software/repository/github/cgarraffo/StelNet", - "avatar": "https://avatars.githubusercontent.com/u/15983620?v=4", - "description": null, + "uid": "gitlab/german.tischler/biobambam2", + "url": "https://gitlab.com/german.tischler/biobambam2", + "rel": "/software/repository/gitlab/german.tischler/biobambam2", + "avatar": "https://gitlab.comNone", + "description": "Tools for early stage alignment file processing", "topics": [] }, { - "uid": "github/churchmanlab/genewalk", - "url": "https://github.com/churchmanlab/genewalk", - "rel": "/software/repository/github/churchmanlab/genewalk", - "avatar": "https://avatars.githubusercontent.com/u/1781555?v=4", - "description": "GeneWalk identifies relevant gene functions for a biological context using network representation learning", + "uid": "gitlab/remram44/taguette", + "url": "https://gitlab.com/remram44/taguette", + "rel": "/software/repository/gitlab/remram44/taguette", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/8339211/taguette.png", + "description": "Free and open source qualitative research tool", "topics": [ - "functional-genomics", - "machine-learning-algorithm" + "document", + "hacktoberfest", + "highlights", + "notes", + "qual", + "qualitative", + "research", + "tagging", + "tags", + "text" ] }, { - "uid": "github/indrops/indrops", - "url": "https://github.com/indrops/indrops", - "rel": "/software/repository/github/indrops/indrops", - "avatar": "https://avatars.githubusercontent.com/u/21204688?v=4", - "description": "Pipeline for processing inDrops sequencing data", + "uid": "gitlab/moerman1/fhi-cc4s", + "url": "https://gitlab.com/moerman1/fhi-cc4s", + "rel": "/software/repository/gitlab/moerman1/fhi-cc4s", + "avatar": "https://gitlab.comNone", + "description": "This project constitutes the interface between the Fritz Haber Institute ab initio molecular simulations (FHI-aims) and the Coupled Cluster for Solids (CC4S) code developed by Felix Hummel and Adreas Grueneis at the TU Wien. \r\n", "topics": [] }, { - "uid": "github/caracal-pipeline/stimela", - "url": "https://github.com/caracal-pipeline/stimela", - "rel": "/software/repository/github/caracal-pipeline/stimela", - "avatar": "https://avatars.githubusercontent.com/u/60778763?v=4", - "description": "Stimela 2.0", + "uid": "gitlab/loic.cg.rossi/pymiedap", + "url": "https://gitlab.com/loic.cg.rossi/pymiedap", + "rel": "/software/repository/gitlab/loic.cg.rossi/pymiedap", + "avatar": "https://gitlab.comNone", + "description": "PyMieDAP = Python Mie Doubling Adding Program. A radiative transfer code with polarization.", "topics": [ - "radio-astronomy", - "pipelines" + "astronomy", + "atmospheres", + "polarization", + "radiative transfer" + ] + }, + { + "uid": "gitlab/Molcas/OpenMolcas", + "url": "https://gitlab.com/Molcas/OpenMolcas", + "rel": "/software/repository/gitlab/Molcas/OpenMolcas", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/3536517/logo_open_flat.png", + "description": "OpenMolcas is a quantum chemistry software package.\r\n\r\nThe key feature of OpenMolcas is the multiconfigurational approach to the electronic structure.", + "topics": [ + "chemistry", + "physics", + "quantum" ] }, { - "uid": "github/caracal-pipeline/caracal", - "url": "https://github.com/caracal-pipeline/caracal", - "rel": "/software/repository/github/caracal-pipeline/caracal", - "avatar": "https://avatars.githubusercontent.com/u/60778763?v=4", - "description": "Containerized Automated Radio Astronomy Calibration (CARACal) pipeline ", + "uid": "gitlab/rki_bioinformatics/IDeFIX", + "url": "https://gitlab.com/rki_bioinformatics/IDeFIX", + "rel": "/software/repository/gitlab/rki_bioinformatics/IDeFIX", + "avatar": "https://gitlab.comNone", + "description": "Index checking for improved demultiplexing of NGS data", + "topics": [] + }, + { + "uid": "gitlab/rki_bioinformatics/HiLive2", + "url": "https://gitlab.com/rki_bioinformatics/HiLive2", + "rel": "/software/repository/gitlab/rki_bioinformatics/HiLive2", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7428486/hilive2_logo.png", + "description": "HiLive2 is a read mapping tool that maps Illumina HiSeq (or comparable) reads right in the moment when they are produced. Please create issues for HiLive2 at https://gitlab.com/lokat/HiLive2.", "topics": [] }, { - "uid": "github/vedantchandra/wdtools", - "url": "https://github.com/vedantchandra/wdtools", - "rel": "/software/repository/github/vedantchandra/wdtools", - "avatar": "https://avatars.githubusercontent.com/u/5503442?v=4", - "description": "computational tools for the spectroscopic analysis of white dwarfs", + "uid": "gitlab/rki_bioinformatics/purple", + "url": "https://gitlab.com/rki_bioinformatics/purple", + "rel": "/software/repository/gitlab/rki_bioinformatics/purple", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/11392663/Purple_128.png", + "description": "Picking Unique Relevant Peptides for viraL Experiments\r\n\r\nAuthors: Johanna Lechner [@LechnerJ], Pauline Hiortand Felix Hartkopf [@HartkopfF]\r\n\r\nSupport: https://gitlab.com/HartkopfF/Purple\r\n\r\nDownload: https://gitlab.com/HartkopfF/Purple/releases", "topics": [] }, { - "uid": "github/icredd-cheminfo/CGRdb2", - "url": "https://github.com/icredd-cheminfo/CGRdb2", - "rel": "/software/repository/github/icredd-cheminfo/CGRdb2", - "avatar": "https://avatars.githubusercontent.com/u/72447540?v=4", + "uid": "gitlab/mauricemolli/petitRADTRANS", + "url": "https://gitlab.com/mauricemolli/petitRADTRANS", + "rel": "/software/repository/gitlab/mauricemolli/petitRADTRANS", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/4048028/logo_radtrans.gif", "description": null, "topics": [] }, { - "uid": "github/DirectDM/directdm-mma", - "url": "https://github.com/DirectDM/directdm-mma", - "rel": "/software/repository/github/DirectDM/directdm-mma", - "avatar": "https://avatars.githubusercontent.com/u/30795796?v=4", - "description": "DirectDM Mathematica package", + "uid": "gitlab/clairedavies/sedbys", + "url": "https://gitlab.com/clairedavies/sedbys", + "rel": "/software/repository/gitlab/clairedavies/sedbys", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/19428398/sedbys_logo.jpg", + "description": "A python-based spectral energy distribution builder for young stars", "topics": [] }, { - "uid": "github/DirectDM/directdm-py", - "url": "https://github.com/DirectDM/directdm-py", - "rel": "/software/repository/github/DirectDM/directdm-py", - "avatar": "https://avatars.githubusercontent.com/u/30795796?v=4", - "description": "Python version of the DirectDM package", + "uid": "gitlab/cosapp/cosapp", + "url": "https://gitlab.com/cosapp/cosapp", + "rel": "/software/repository/gitlab/cosapp/cosapp", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/19967329/cosapp_web.png", + "description": "CoSApp core package", "topics": [] }, { - "uid": "github/mtakahiro/bbpn", - "url": "https://github.com/mtakahiro/bbpn", - "rel": "/software/repository/github/mtakahiro/bbpn", - "avatar": "https://avatars.githubusercontent.com/u/15098413?v=4", - "description": "Bye Bye Pink Noise", - "topics": [] + "uid": "gitlab/pipe3d/pyPipe3D", + "url": "https://gitlab.com/pipe3d/pyPipe3D", + "rel": "/software/repository/gitlab/pipe3d/pyPipe3D", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/26080505/pyPipe3D_colorido_avatar.png", + "description": "pyPipe3D is a spectroscopy analysis pipeline which produces coherent, easy to distribute and compare, parameters of the stellar populations and the ionized gas, suited in particular for data from the most recent optical IFS surveys.", + "topics": [ + "ifs", + "ionized gas", + "ism", + "spectroscopy", + "stellar population synthesis", + "techniques" + ] }, { - "uid": "github/mtakahiro/gsf", - "url": "https://github.com/mtakahiro/gsf", - "rel": "/software/repository/github/mtakahiro/gsf", - "avatar": "https://avatars.githubusercontent.com/u/15098413?v=4", - "description": "Grism SED Fitting package", + "uid": "gitlab/vincent-sater/umigen", + "url": "https://gitlab.com/vincent-sater/umigen", + "rel": "/software/repository/gitlab/vincent-sater/umigen", + "avatar": "https://gitlab.comNone", + "description": "UMI-based reads simulator for variant calling evaluation in paired-end sequencing NGS libraries", "topics": [] }, { - "uid": "github/seheonoh/2dbat", - "url": "https://github.com/seheonoh/2dbat", - "rel": "/software/repository/github/seheonoh/2dbat", - "avatar": "https://avatars.githubusercontent.com/u/24447326?v=4", - "description": "2dbat v1.0", + "uid": "gitlab/petsc/petsc", + "url": "https://gitlab.com/petsc/petsc", + "rel": "/software/repository/gitlab/petsc/petsc", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/13882401/PETSc_RBG-logo.png", + "description": "PETSc, pronounced PET-see (the S is silent), is a suite of data structures and routines for the scalable (parallel) solution of scientific applications modeled by partial differential equations.", "topics": [] }, { - "uid": "github/seheonoh/baygaud", - "url": "https://github.com/seheonoh/baygaud", - "rel": "/software/repository/github/seheonoh/baygaud", - "avatar": "https://avatars.githubusercontent.com/u/24447326?v=4", - "description": null, + "uid": "gitlab/pythia-uq/pythia", + "url": "https://gitlab.com/pythia-uq/pythia", + "rel": "/software/repository/gitlab/pythia-uq/pythia", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/45854627/logo_small.png", + "description": "PyThia Uncertainty Quantification Toolbox", "topics": [] }, { - "uid": "github/icb-dcm/pyabc", - "url": "https://github.com/ICB-DCM/pyABC", - "rel": "/software/repository/github/icb-dcm/pyabc", - "avatar": "https://avatars.githubusercontent.com/u/17879961?v=4", - "description": "distributed, likelihood-free inference", + "uid": "gitlab/davidwoodburn/r3f", + "url": "https://gitlab.com/davidwoodburn/r3f", + "rel": "/software/repository/gitlab/davidwoodburn/r3f", + "avatar": "https://gitlab.comNone", + "description": "A library for three-dimensional, reference-frame conversions", "topics": [ - "abc", - "approximate-bayesian-inference", - "likelihood-free-inference", - "parameter-inference" + "ECEF", + "Geodetic", + "Inertial measurement unit", + "navigation", + "reference frames", + "rotation" ] }, { - "uid": "github/sihanjiao/j-comb", - "url": "https://github.com/SihanJiao/J-comb", - "rel": "/software/repository/github/sihanjiao/j-comb", - "avatar": "https://avatars.githubusercontent.com/u/31346093?v=4", - "description": null, - "topics": [] - }, - { - "uid": "github/trichter/yam", - "url": "https://github.com/trichter/yam", - "rel": "/software/repository/github/trichter/yam", - "avatar": "https://avatars.githubusercontent.com/u/2046150?v=4", - "description": "Yet another monitoring tool using correlations of ambient noise", - "topics": [] + "uid": "gitlab/davidwoodburn/itrm", + "url": "https://gitlab.com/davidwoodburn/itrm", + "rel": "/software/repository/gitlab/davidwoodburn/itrm", + "avatar": "https://gitlab.comNone", + "description": "Interactive Terminal Utilities", + "topics": [ + "ascii-art", + "interactive", + "plotting", + "terminal" + ] }, { - "uid": "github/mikhailklassen/protostellar_evolution", - "url": "https://github.com/mikhailklassen/protostellar_evolution", - "rel": "/software/repository/github/mikhailklassen/protostellar_evolution", - "avatar": "https://avatars.githubusercontent.com/u/1656108?v=4", - "description": "Evolves the radius and luminosity of a protostar from formation to a main sequence star", - "topics": [] + "uid": "gitlab/gpagano/lensinggw", + "url": "https://gitlab.com/gpagano/lensinggw", + "rel": "/software/repository/gitlab/gpagano/lensinggw", + "avatar": "https://gitlab.comNone", + "description": null, + "topics": [ + "lensing of gravitational waves" + ] }, { - "uid": "github/gmarcais/Jellyfish", - "url": "https://github.com/gmarcais/Jellyfish", - "rel": "/software/repository/github/gmarcais/Jellyfish", - "avatar": "https://avatars.githubusercontent.com/u/1108481?v=4", - "description": "A fast multi-threaded k-mer counter", + "uid": "gitlab/bu_cnio/vulcanspot", + "url": "https://gitlab.com/bu_cnio/vulcanspot", + "rel": "/software/repository/gitlab/bu_cnio/vulcanspot", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12800427/logo.png", + "description": "", "topics": [] }, { - "uid": "github/gmarcais/Quorum", - "url": "https://github.com/gmarcais/Quorum", - "rel": "/software/repository/github/gmarcais/Quorum", - "avatar": "https://avatars.githubusercontent.com/u/1108481?v=4", - "description": "QUality Optimized Reads from the University of Maryland", + "uid": "gitlab/ztzou/phydl", + "url": "https://gitlab.com/ztzou/phydl", + "rel": "/software/repository/gitlab/ztzou/phydl", + "avatar": "https://gitlab.comNone", + "description": "Phylogenetics by Deep Learning. A residual neural network for inference of quartet phylogenetic tree topology.", "topics": [] }, { - "uid": "github/ptiede/Comrade.jl", - "url": "https://github.com/ptiede/Comrade.jl", - "rel": "/software/repository/github/ptiede/Comrade.jl", - "avatar": "https://avatars.githubusercontent.com/u/5565461?v=4", + "uid": "gitlab/joseaher/astroplotlib", + "url": "https://gitlab.com/joseaher/astroplotlib", + "rel": "/software/repository/gitlab/joseaher/astroplotlib", + "avatar": "https://gitlab.comNone", "description": null, "topics": [] }, { - "uid": "github/DGtal-team/DGtal", - "url": "https://github.com/DGtal-team/DGtal", - "rel": "/software/repository/github/DGtal-team/DGtal", - "avatar": "https://avatars.githubusercontent.com/u/1013900?v=4", - "description": "Digital Geometry Tools and Algorithm Library", - "topics": [ - "digital-geometry", - "geometry-processing", - "topology", - "computational-geometry", - "discrete-mathematics" - ] + "uid": "gitlab/uit-sfb/metapipe", + "url": "https://gitlab.com/uit-sfb/metapipe", + "rel": "/software/repository/gitlab/uit-sfb/metapipe", + "avatar": "https://gitlab.comNone", + "description": "Metapipe based on Nextflow", + "topics": [] }, { - "uid": "github/tony-travis/PIQUE", - "url": "https://github.com/tony-travis/PIQUE", - "rel": "/software/repository/github/tony-travis/PIQUE", - "avatar": "https://avatars.githubusercontent.com/u/4498665?v=4", - "description": "Parallel Identification of QTL's Using EMMAX", + "uid": "gitlab/chrjan/seq-seq-pan", + "url": "https://gitlab.com/chrjan/seq-seq-pan", + "rel": "/software/repository/gitlab/chrjan/seq-seq-pan", + "avatar": "https://gitlab.comNone", + "description": "seq-seq-pan is a workflow for the SEQuential alignment of SEQuences to build a PAN-genome data structure and a whole-genome-alignment.", "topics": [] }, { - "uid": "github/gururajw/superlite", - "url": "https://github.com/gururajw/superlite", - "rel": "/software/repository/github/gururajw/superlite", - "avatar": "https://avatars.githubusercontent.com/u/33475990?v=4", - "description": "SuperLite: IMC-DDMC Radiation Transport Code for Interacting Transients", + "uid": "gitlab/qc-devs/aqcnes", + "url": "https://gitlab.com/qc-devs/aqcnes", + "rel": "/software/repository/gitlab/qc-devs/aqcnes", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/60711361/ThermalExpansion_Subdomain.png", + "description": "Mirror of https://gitlab.ethz.ch/mechanics-and-materials/aqcnes/", "topics": [] }, { - "uid": "github/CIBERER/nf-CBRA-snvs", - "url": "https://github.com/CIBERER/nf-CBRA-snvs", - "rel": "/software/repository/github/CIBERER/nf-CBRA-snvs", - "avatar": "https://avatars.githubusercontent.com/u/105356203?v=4", + "uid": "gitlab/random-quintessence/random-quintessence", + "url": "https://gitlab.com/random-quintessence/random-quintessence", + "rel": "/software/repository/gitlab/random-quintessence/random-quintessence", + "avatar": "https://gitlab.comNone", "description": null, "topics": [] }, { - "uid": "github/sisl/ExpFamilyPCA.jl", - "url": "https://github.com/sisl/ExpFamilyPCA.jl", - "rel": "/software/repository/github/sisl/ExpFamilyPCA.jl", - "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", - "description": "A Julia package for exponential family principal component analysis (EPCA).", + "uid": "gitlab/chaver/choco-mining", + "url": "https://gitlab.com/chaver/choco-mining", + "rel": "/software/repository/gitlab/chaver/choco-mining", + "avatar": "https://gitlab.comNone", + "description": "Data mining with Choco solver", "topics": [ - "dimensionality-reduction", - "exponential-family", - "julia", - "machine-learning", - "pca", - "principal-component-analysis", - "compression", - "epca", - "compression-algorithm", - "denoising", - "interpretability", - "reinforcement-learning", - "signal-processing" + "Association Rules Mining", + "Choco solver", + "Constraint Programming", + "Pareto", + "Skypattern", + "data mining", + "pattern mining" ] }, { - "uid": "github/sisl/PyroRL", - "url": "https://github.com/sisl/PyroRL", - "rel": "/software/repository/github/sisl/PyroRL", - "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", - "description": "An RL environment made for wildfire evacuation.", + "uid": "gitlab/cirad-apps/phylostems", + "url": "https://gitlab.com/cirad-apps/phylostems", + "rel": "/software/repository/gitlab/cirad-apps/phylostems", + "avatar": "https://gitlab.comNone", + "description": "**phylostems** is a graphical tool developped by CIRAD (UMR PVBMT) to explore temporal signal at various evolutionary scales in heterochronous nucleic acid sequences datasets.", "topics": [] }, { - "uid": "github/sisl/POMDPStressTesting.jl", - "url": "https://github.com/sisl/POMDPStressTesting.jl", - "rel": "/software/repository/github/sisl/POMDPStressTesting.jl", - "avatar": "https://avatars.githubusercontent.com/u/6294054?v=4", - "description": "Adaptive stress testing of black-box systems within POMDPs.jl", - "topics": [ - "stress-test", - "simulation", - "solvers", - "pomdps", - "black-box" - ] + "uid": "gitlab/cmbm-ethz/miop", + "url": "https://gitlab.com/miop-project/miop", + "rel": "/software/repository/gitlab/cmbm-ethz/miop", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/68557472/po.png", + "description": "A modular pipeline for 3D reconstruction from SEM images", + "topics": [] }, { - "uid": "github/vreverdy/magrathea-pathfinder", - "url": "https://github.com/vreverdy/magrathea-pathfinder", - "rel": "/software/repository/github/vreverdy/magrathea-pathfinder", - "avatar": "https://avatars.githubusercontent.com/u/6286317?v=4", - "description": "A 3D AMR high-performance framework to propagate photons in cosmological simulations", + "uid": "gitlab/djsmithbham/cnearest", + "url": "https://gitlab.com/djsmithbham/cnearest", + "rel": "/software/repository/gitlab/djsmithbham/cnearest", + "avatar": "https://gitlab.comNone", + "description": "C++ nearest neighbour regularized stokeslets", "topics": [] }, { - "uid": "github/pudu-py/pudu", - "url": "https://github.com/pudu-py/pudu", - "rel": "/software/repository/github/pudu-py/pudu", - "avatar": "https://avatars.githubusercontent.com/u/118768894?v=4", - "description": "A Python library for explainability of machine learinng algorithms in an agnostic, deterministic, and simple way.", + "uid": "gitlab/mule-tools/package-x", + "url": "https://gitlab.com/mule-tools/package-x", + "rel": "/software/repository/gitlab/mule-tools/package-x", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/37935976/PackageXIcon.png", + "description": "A re-publication of [Package-X](http://web.archive.org/web/20220619174704/packagex.hepforge.org/). All credit to Hiren Patel!", "topics": [] }, { - "uid": "github/AndreNicolasChene/DRAGRACES", - "url": "https://github.com/AndreNicolasChene/DRAGRACES", - "rel": "/software/repository/github/AndreNicolasChene/DRAGRACES", - "avatar": "https://avatars.githubusercontent.com/u/22158780?v=4", - "description": "Reduction pipeline for GRACES spectra (Gemini spectrograph)", + "uid": "gitlab/chjordan/sslf", + "url": "https://gitlab.com/chjordan/sslf", + "rel": "/software/repository/gitlab/chjordan/sslf", + "avatar": "https://gitlab.comNone", + "description": "Simple Spectral Line Finder", "topics": [] }, { - "uid": "github/mackelab/sbi", - "url": "https://github.com/mackelab/sbi", - "rel": "/software/repository/github/mackelab/sbi", - "avatar": "https://avatars0.githubusercontent.com/u/9674966?v=4", - "description": "Simulation-based inference in PyTorch", + "uid": "gitlab/pvst/asi", + "url": "https://gitlab.com/pvst/asi", + "rel": "/software/repository/gitlab/pvst/asi", + "avatar": "https://gitlab.comNone", + "description": "Atomic Simulations Interface", "topics": [] }, { - "uid": "github/sebastien-plutniak/archeofrag", - "url": "https://github.com/sebastien-plutniak/archeofrag", - "rel": "/software/repository/github/sebastien-plutniak/archeofrag", - "avatar": "https://avatars.githubusercontent.com/u/53480606?v=4", - "description": "R package for Refitting and Spatial Analysis in Archaeology", - "topics": [ - "archaeology", - "archaeological-science", - "archaeological-objects", - "network-analysis", - "fragmentation" - ] + "uid": "gitlab/octopus-code/octopus", + "url": "https://gitlab.com/octopus-code/octopus", + "rel": "/software/repository/gitlab/octopus-code/octopus", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/2018405/octopus.png", + "description": "Real-space Time-Dependent Density Functional Theory code", + "topics": [] }, { - "uid": "github/sebastien-plutniak/archeoviz", - "url": "https://github.com/sebastien-plutniak/archeoviz", - "rel": "/software/repository/github/sebastien-plutniak/archeoviz", - "avatar": "https://avatars.githubusercontent.com/u/53480606?v=4", - "description": "Visualisation, Exploration, and Web Communication of Archaeological Spatial Data", - "topics": [ - "archaeology", - "archeology", - "data-visualization", - "r", - "r-package", - "rstats" - ] + "uid": "gitlab/rahmannlab/episegmix", + "url": "https://gitlab.com/rahmannlab/episegmix", + "rel": "/software/repository/gitlab/rahmannlab/episegmix", + "avatar": "https://gitlab.comNone", + "description": null, + "topics": [] }, { - "uid": "github/hrwakeford/ExoTiC-ISM", - "url": "https://github.com/hrwakeford/ExoTiC-ISM", - "rel": "/software/repository/github/hrwakeford/ExoTiC-ISM", - "avatar": "https://avatars3.githubusercontent.com/u/7988823?v=4", - "description": "This is a repository for the reduction pipeline detailed in Wakeford, et al., 2016, ApJ. The method implements marginalization across a series of models to represent stochastic models for observatory and instrument systematics. This is primarily for HST WFC3, however, may be extened to STIS in the future. ", + "uid": "gitlab/elsi_project/elsi_interface", + "url": "https://gitlab.com/elsi_project/elsi_interface", + "rel": "/software/repository/gitlab/elsi_project/elsi_interface", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/20804728/elsi_200629.png", + "description": "ELSI: A software interface designed for electronic structure codes to connect with ELPA, libOMM, PEXSI, EigenExa, SLEPc, NTPoly, BSEPACK, LAPACK, MAGMA, and other solver libraries.", "topics": [] }, { - "uid": "github/SWE-UniStuttgart/Qlunc", - "url": "https://github.com/SWE-UniStuttgart/Qlunc", - "rel": "/software/repository/github/SWE-UniStuttgart/Qlunc", - "avatar": "https://avatars.githubusercontent.com/u/36884435?v=4", - "description": "A numerical framework to estimate hardware and data processing uncertainties of a lidar device", - "topics": [ - "uncertainty", - "wind-lidar", - "openlidar" - ] + "uid": "gitlab/magnumpi/magnumpi", + "url": "https://gitlab.com/magnumpi/magnumpi", + "rel": "/software/repository/gitlab/magnumpi/magnumpi", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/8913469/Tom_20Selleck_20as_20Thomas_20Magnum_20P.I._large.jpg", + "description": "Potential Integrator", + "topics": [] }, { - "uid": "github/timothygebhard/ml4ptp", - "url": "https://github.com/timothygebhard/ml4ptp", - "rel": "/software/repository/github/timothygebhard/ml4ptp", - "avatar": "https://avatars.githubusercontent.com/u/10123688?v=4", - "description": "Machine learning for PT profiles of exoplanet atmospheres \ud83e\ude90", + "uid": "gitlab/ezlab/busco", + "url": "https://gitlab.com/ezlab/busco", + "rel": "/software/repository/gitlab/ezlab/busco", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/1544766/Screen_Shot_2019-11-26_at_17.26.57.png", + "description": "Assessing genome assembly and annotation completeness with Benchmarking Universal Single-Copy Orthologs (BUSCO)", "topics": [] }, { - "uid": "github/timothygebhard/fm4ar", - "url": "https://github.com/timothygebhard/fm4ar", - "rel": "/software/repository/github/timothygebhard/fm4ar", - "avatar": "https://avatars.githubusercontent.com/u/10123688?v=4", - "description": "Flow matching for atmospheric retrievals", + "uid": "gitlab/robizzard/libcdict", + "url": "https://gitlab.com/rob.izzard/libcdict", + "rel": "/software/repository/gitlab/robizzard/libcdict", + "avatar": "https://gitlab.comNone", + "description": "A generic associative array, also know as dictionary or hash, library in C, based on uthash and extended to be more user friendly and include integration features such as JSON output.", "topics": [] }, { - "uid": "github/bioinfo-center-pasteur-fr/toppred", - "url": "https://github.com/C3BI-pasteur-fr/toppred", - "rel": "/software/repository/github/bioinfo-center-pasteur-fr/toppred", - "avatar": "https://avatars.githubusercontent.com/u/9270247?v=4", - "description": "toppred :: Transmembrane topology prediction based on von Heijne, G. (1992) Membrane Protein Structure Prediction: Hydrophobicity Analysis and the 'Positive Inside' (PMID: 1593632)", - "topics": [] + "uid": "gitlab/micromorph/ratel", + "url": "https://gitlab.com/micromorph/ratel", + "rel": "/software/repository/gitlab/micromorph/ratel", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/29759477/Ratellogo.png", + "description": "Extensible, performance-portable solid mechanics with libCEED and PETSc", + "topics": [ + "elasticity", + "finite elements", + "libceed", + "matrix-free", + "petsc", + "solid mechanics" + ] }, { - "uid": "github/BarquistLab/mason_paper", - "url": "https://github.com/BarquistLab/mason_paper", - "rel": "/software/repository/github/BarquistLab/mason_paper", - "avatar": "https://avatars.githubusercontent.com/u/35298356?v=4", - "description": "Code and analysis for MASON paper", + "uid": "gitlab/burstcube/mhealpy", + "url": "https://gitlab.com/burstcube/mhealpy", + "rel": "/software/repository/gitlab/burstcube/mhealpy", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/21249835/Screen_Shot_2020-09-20_at_3.59.09_PM.png", + "description": null, "topics": [] }, { - "uid": "github/mrilikecoding/StreamPoseML", - "url": "https://github.com/mrilikecoding/StreamPoseML", - "rel": "/software/repository/github/mrilikecoding/StreamPoseML", - "avatar": "https://avatars.githubusercontent.com/u/3507761?v=4", - "description": "pose estimation / ML model wrapper and annotation utility", + "uid": "gitlab/EliseLei/easychem", + "url": "https://gitlab.com/EliseLei/easychem", + "rel": "/software/repository/gitlab/EliseLei/easychem", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/39021845/easyCHEM_logo_light.png", + "description": null, "topics": [] }, { - "uid": "github/michaeltouati/ESVM", - "url": "https://github.com/michaeltouati/ESVM", - "rel": "/software/repository/github/michaeltouati/ESVM", - "avatar": "https://avatars.githubusercontent.com/u/14829604?v=4", - "description": "Finite-volume Vlasov-Maxwell code to study for Plasma Physics simulations", - "topics": [ - "vlasov", - "maxwell", - "plasmas", - "landau-damping", - "electrostatic-wakefield", - "two-stream-instability", - "finite-volume" - ] + "uid": "gitlab/remikz/nccmp", + "url": "https://gitlab.com/remikz/nccmp", + "rel": "/software/repository/gitlab/remikz/nccmp", + "avatar": "https://gitlab.comNone", + "description": "nccmp - Compare 2 NetCDF files. ", + "topics": [] }, { - "uid": "github/nathanaelbosch/ProbNumDiffEq.jl", - "url": "https://github.com/nathanaelbosch/ProbNumDiffEq.jl", - "rel": "/software/repository/github/nathanaelbosch/ProbNumDiffEq.jl", - "avatar": "https://avatars.githubusercontent.com/u/25008422?v=4", - "description": "Probabilistic Numerical Differential Equation solvers via Bayesian filtering and smoothing", + "uid": "gitlab/gmamon/MAMPOSSt", + "url": "https://gitlab.com/gmamon/MAMPOSSt", + "rel": "/software/repository/gitlab/gmamon/MAMPOSSt", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/6066861/MAMPOSSt_logo.png", + "description": null, "topics": [ - "julia", - "differential-equations", - "probabilistic-models", - "ode", - "ode-solver", - "probabilistic-numerics", - "hacktoberfest" + "Mass/orbit modeling" ] }, { - "uid": "github/Washington-University/CiftiLib", - "url": "https://github.com/Washington-University/CiftiLib", - "rel": "/software/repository/github/Washington-University/CiftiLib", - "avatar": "https://avatars.githubusercontent.com/u/1493901?v=4", - "description": "C++ Library for reading and writing CIFTI-2 and CIFTI-1 files", + "uid": "gitlab/multigris/mgris", + "url": "https://gitlab.com/multigris/mgris", + "rel": "/software/repository/gitlab/multigris/mgris", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/34419388/multigris_small.png", + "description": "MULTIGRIS (\"mgris\") is a Bayesian multi-dimensional grid search using PyMC to extract the posterior distributions of primary grid parameters and predict unobserved parameters/observables.", "topics": [ - "c-plus-plus", - "cifti", - "nifti" - ] - }, - { - "uid": "github/lyalpha/pympc", - "url": "https://github.com/Lyalpha/pympc", - "rel": "/software/repository/github/lyalpha/pympc", - "avatar": "https://avatars.githubusercontent.com/u/12103194?v=4", - "description": "minor planet checking", - "topics": [] + "Bayesian statistics", + "astrophysics", + "grid", + "mcmc", + "modelling" + ] }, { - "uid": "github/RenLabBioinformatics/M6Allele", - "url": "https://github.com/RenLabBioinformatics/M6Allele", - "rel": "/software/repository/github/RenLabBioinformatics/M6Allele", - "avatar": "https://avatars.githubusercontent.com/u/36150099?v=4", - "description": "M6Allele: A toolkit for detection of allele-specific RNA N6-methyladenosine modifications", + "uid": "gitlab/morikawa-lab-osakau/vibir-parallel-compute", + "url": "https://gitlab.com/morikawa-lab-osakau/vibir-parallel-compute", + "rel": "/software/repository/gitlab/morikawa-lab-osakau/vibir-parallel-compute", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58824042/logo.png", + "description": "A HPC-ready parallelized implementation of Vibration and Infrared computations from DFT simulations.\r\n\r\nhttps://morikawa-lab-osakau.gitlab.io/vibir-parallel-compute", "topics": [] }, { - "uid": "github/cbg-ethz/shorah", - "url": "https://github.com/cbg-ethz/shorah", - "rel": "/software/repository/github/cbg-ethz/shorah", - "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", - "description": "Repo for the software suite ShoRAH (Short Reads Assembly into Haplotypes)", + "uid": "gitlab/davidtourigny/dynamic-fba", + "url": "https://gitlab.com/davidtourigny/dynamic-fba", + "rel": "/software/repository/gitlab/davidtourigny/dynamic-fba", + "avatar": "https://gitlab.comNone", + "description": "", "topics": [] }, { - "uid": "github/cbg-ethz/smallgenomeutilities", - "url": "https://github.com/cbg-ethz/smallgenomeutilities", - "rel": "/software/repository/github/cbg-ethz/smallgenomeutilities", - "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", - "description": "smallgenomeutilities is a collection of Python scripts to convert alignments between different reference genomes.", + "uid": "gitlab/jtagusari/hrisk-noisemodelling", + "url": "https://gitlab.com/jtagusari/hrisk-noisemodelling", + "rel": "/software/repository/gitlab/jtagusari/hrisk-noisemodelling", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/cbg-ethz/PredictHaplo", - "url": "https://github.com/cbg-ethz/PredictHaplo", - "rel": "/software/repository/github/cbg-ethz/PredictHaplo", - "avatar": "https://avatars2.githubusercontent.com/u/12068026?v=4", - "description": "This software aims at reconstructing haplotypes from next-generation sequencing data.", + "uid": "gitlab/emd-dev/emd", + "url": "https://gitlab.com/emd-dev/emd", + "rel": "/software/repository/gitlab/emd-dev/emd", + "avatar": "https://gitlab.comNone", + "description": "Empirical Mode Decomposition in Python\r\n\r\n\"pipeline", "topics": [] }, { - "uid": "github/cbg-ethz/LolliPop", - "url": "https://github.com/cbg-ethz/LolliPop", - "rel": "/software/repository/github/cbg-ethz/LolliPop", - "avatar": "https://avatars.githubusercontent.com/u/12068026?v=4", - "description": "Deconvolution for Wastewater Genomics", + "uid": "gitlab/thartwig/asloth", + "url": "https://gitlab.com/thartwig/asloth", + "rel": "/software/repository/gitlab/thartwig/asloth", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/35049365/ASLOTH_logo_official.jpg", + "description": "Semi-analytical model A-SLOTH (Ancient Stars and Local Observables by Tracing Halos)", "topics": [] }, { - "uid": "github/cbg-ethz/V-pipe", - "url": "https://github.com/cbg-ethz/V-pipe", - "rel": "/software/repository/github/cbg-ethz/V-pipe", - "avatar": "https://avatars2.githubusercontent.com/u/12068026?v=4", - "description": "V-pipe is a pipeline designed for analysing NGS data of short viral genomes", + "uid": "gitlab/cosmology-ethz/ufig", + "url": "https://gitlab.com/cosmology-ethz/ufig", + "rel": "/software/repository/gitlab/cosmology-ethz/ufig", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/64659173/example_image_small.jpg", + "description": "UFig: The Ultra Fast Image Generator", "topics": [] }, { - "uid": "github/bencebeky/spotrod", - "url": "https://github.com/bencebeky/spotrod", - "rel": "/software/repository/github/bencebeky/spotrod", - "avatar": "https://avatars.githubusercontent.com/u/6144440?v=4", - "description": "A semi-analytic model for transits of spotted stars -- C implementation and Python API", + "uid": "gitlab/AstroVian/bmarxiv", + "url": "https://gitlab.com/AstroVian/bmarxiv", + "rel": "/software/repository/gitlab/AstroVian/bmarxiv", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/28500894/PAph_dog.gif", + "description": null, "topics": [] }, { - "uid": "github/OPUS-MaLab/opus_fold3", - "url": "https://github.com/OPUS-MaLab/opus_fold3", - "rel": "/software/repository/github/OPUS-MaLab/opus_fold3", - "avatar": "https://avatars.githubusercontent.com/u/82582402?v=4", - "description": null, + "uid": "gitlab/ENKI-portal/ThermoEngine", + "url": "https://gitlab.com/ENKI-portal/ThermoEngine", + "rel": "/software/repository/gitlab/ENKI-portal/ThermoEngine", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/2313798/Untitled.png", + "description": "Python, C, C++ and Objective C code that Implement thermodynamic properties of stoichiometric phases and solutions. This is the main code repository of the ENKI project.", "topics": [] }, { - "uid": "github/automl/amltk", - "url": "https://github.com/automl/amltk", - "rel": "/software/repository/github/automl/amltk", - "avatar": "https://avatars.githubusercontent.com/u/6469053?v=4", - "description": "A build-it-yourself AutoML Framework", + "uid": "gitlab/ENKI-portal/ThermoCodegen", + "url": "https://gitlab.com/ENKI-portal/ThermoCodegen", + "rel": "/software/repository/gitlab/ENKI-portal/ThermoCodegen", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/37653498/tcg_logo_cropped.png", + "description": "ThermoCodegen: a python/C++ package for the generation of custom thermodynamic models", "topics": [] }, { - "uid": "github/amerand/PMOIRED", - "url": "https://github.com/amerand/PMOIRED", - "rel": "/software/repository/github/amerand/PMOIRED", - "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", - "description": "Display and fit Optical (spectro-)Interferometric OIFITS data ", + "uid": "gitlab/ENKI-portal/vaporock", + "url": "https://gitlab.com/ENKI-portal/vaporock", + "rel": "/software/repository/gitlab/ENKI-portal/vaporock", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/18914416/vaporock.png", + "description": "Thermodynamics of vaporized silicate rocks & melts for modeling magma ocean atmospheres and stellar nebula", "topics": [] }, { - "uid": "github/amerand/CANDID", - "url": "https://github.com/amerand/CANDID", - "rel": "/software/repository/github/amerand/CANDID", - "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", - "description": "Companion Analysis and Non-Detection in Interferometric Data", + "uid": "gitlab/binary_c/binary_c-python", + "url": "https://gitlab.com/binary_c/binary_c-python", + "rel": "/software/repository/gitlab/binary_c/binary_c-python", + "avatar": "https://gitlab.comNone", + "description": "Python module to interface with the binary_c stellar population framework.\r\n\r\nThe current stable branch is 1.0.0 which you can find in the [releases/1.0.0/2.2.4 branch](https://gitlab.com/binary_c/binary_c-python/-/tree/releases/1.0.0/2.2.4) which works with [binary_c version 2.2.4](https://gitlab.com/binary_c/binary_c/-/tree/development/2.2.4)", "topics": [] }, { - "uid": "github/amerand/SPIPS", - "url": "https://github.com/amerand/SPIPS", - "rel": "/software/repository/github/amerand/SPIPS", - "avatar": "https://avatars.githubusercontent.com/u/2572749?v=4", - "description": "Spectro-Photo-Interferometry of Pulsating Stars", + "uid": "gitlab/LouisLab/PiVR", + "url": "https://gitlab.com/LouisLab/pivr", + "rel": "/software/repository/gitlab/LouisLab/PiVR", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/9212004/PiVR_logo.png", + "description": "PiVR has been developed to track a variety of animals in real time and present them with light stimuli. Manual can be found at www.PiVR.org, scientific publication at https://doi.org/10.1371/journal.pbio.3000712\r\n", "topics": [] }, { - "uid": "github/imr-framework/OCTOPUS", - "url": "https://github.com/imr-framework/OCTOPUS", - "rel": "/software/repository/github/imr-framework/OCTOPUS", - "avatar": "https://avatars.githubusercontent.com/u/37110500?v=4", - "description": "Off-resonance Correction OPen soUrce Software", + "uid": "gitlab/ProjectRHEA/flowsolverrhea", + "url": "https://gitlab.com/ProjectRHEA/flowsolverrhea", + "rel": "/software/repository/gitlab/ProjectRHEA/flowsolverrhea", + "avatar": "https://gitlab.comNone", + "description": "RHEA: an open-source Reproducible and Hybrid-architecture flow solver Engineered for Academia", "topics": [] }, { - "uid": "github/j-erler/pymf", - "url": "https://github.com/j-erler/pymf", - "rel": "/software/repository/github/j-erler/pymf", - "avatar": "https://avatars.githubusercontent.com/u/35317736?v=4", - "description": "A python implementation of several matched filtering techniques for astronomical images.", + "uid": "gitlab/metafundev/metafun", + "url": "https://gitlab.com/metafundev/metafun", + "rel": "/software/repository/gitlab/metafundev/metafun", + "avatar": "https://gitlab.comNone", + "description": "", "topics": [] }, { - "uid": "github/networkx/networkx", - "url": "https://github.com/networkx/networkx", - "rel": "/software/repository/github/networkx/networkx", - "avatar": "https://avatars2.githubusercontent.com/u/388785?v=4", - "description": "Network Analysis in Python", + "uid": "gitlab/sevecekp/sph", + "url": "https://gitlab.com/sevecekp/sph", + "rel": "/software/repository/gitlab/sevecekp/sph", + "avatar": "https://gitlab.comNone", + "description": "Library and graphical tools for running SPH and N-body simulations.", "topics": [ - "python", - "complex-networks", - "graph-theory", - "graph-algorithms", - "graph-analysis", - "graph-generation", - "graph-visualization" + "SPH", + "nbody", + "opensph", + "simulation" ] }, { - "uid": "github/opimwue/ddop", - "url": "https://github.com/opimwue/ddop", - "rel": "/software/repository/github/opimwue/ddop", - "avatar": "https://avatars.githubusercontent.com/u/83957455?v=4", - "description": "https://opimwue.github.io/ddop/.", + "uid": "gitlab/sissopp_developers/sissopp", + "url": "https://gitlab.com/sissopp_developers/sissopp", + "rel": "/software/repository/gitlab/sissopp_developers/sissopp", + "avatar": "https://gitlab.comNone", + "description": "C++ implementation of sisso.", "topics": [] }, { - "uid": "github/joe-antognini/kozai", - "url": "https://github.com/joe-antognini/kozai", - "rel": "/software/repository/github/joe-antognini/kozai", - "avatar": "https://avatars.githubusercontent.com/u/7061933?v=4", - "description": "A Python package to evolve hierarchical triples in the secular approximation", + "uid": "gitlab/imoralc/malu-ifs-visualization-tool", + "url": "https://gitlab.com/imoralc/malu-ifs-visualization-tool", + "rel": "/software/repository/gitlab/imoralc/malu-ifs-visualization-tool", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/psheehan/pdspy", - "url": "https://github.com/psheehan/pdspy", - "rel": "/software/repository/github/psheehan/pdspy", - "avatar": "https://avatars.githubusercontent.com/u/5460275?v=4", - "description": "pdspy: MCMC for Monte Carlo Dust Radiative Transfer Modeling", + "uid": "gitlab/David_Haegele/line_racer", + "url": "https://gitlab.com/David_Haegele/line_racer", + "rel": "/software/repository/gitlab/David_Haegele/line_racer", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/mischaschirmer/nebular", - "url": "https://github.com/mischaschirmer/nebular", - "rel": "/software/repository/github/mischaschirmer/nebular", - "avatar": "https://avatars.githubusercontent.com/u/12635693?v=4", - "description": "NEBULAR is a lightweight software to synthesize the astrophysical spectrum of a hydrogen helium gas mix in collisional ionization equilibrium. It is written in C++ and depends on the GNU Scientific Library (GSL).", + "uid": "gitlab/dsbowen/conditional-inference", + "url": "https://gitlab.com/dsbowen/conditional-inference", + "rel": "/software/repository/gitlab/dsbowen/conditional-inference", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/pennsignals/chime", - "url": "https://github.com/pennsignals/chime", - "rel": "/software/repository/github/pennsignals/chime", - "avatar": "https://avatars.githubusercontent.com/u/24457487?v=4", - "description": "COVID-19 Hospital Impact Model for Epidemics", + "uid": "gitlab/mainlabwsu/bims", + "url": "https://gitlab.com/mainlabwsu/bims", + "rel": "/software/repository/gitlab/mainlabwsu/bims", + "avatar": "https://gitlab.comNone", + "description": "BIMS", "topics": [] }, { - "uid": "github/yangfangs/test_GFICLEE", - "url": "https://github.com/yangfangs/test_GFICLEE", - "rel": "/software/repository/github/yangfangs/test_GFICLEE", - "avatar": "https://avatars.githubusercontent.com/u/10369795?v=4", - "description": "test GFICLEE model", - "topics": [] + "uid": "gitlab/open-darts/open-darts", + "url": "https://gitlab.com/open-darts/open-darts", + "rel": "/software/repository/gitlab/open-darts/open-darts", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/43477574/logo.png", + "description": "The DARTS framework is designed for forward and inverse modeling in geo-energy applications.", + "topics": [ + "energy transition", + "geothermal energy production", + "modeling of CO2 sequestration" + ] }, { - "uid": "github/yangfangs/KPP", - "url": "https://github.com/yangfangs/KPP", - "rel": "/software/repository/github/yangfangs/KPP", - "avatar": "https://avatars.githubusercontent.com/u/10369795?v=4", - "description": "KPP (kmer phylogenetic profile) algorithm", + "uid": "gitlab/dalton/dalton", + "url": "https://gitlab.com/dalton/dalton", + "rel": "/software/repository/gitlab/dalton/dalton", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/4007652/pRZ6xe8j_400x400.jpg", + "description": "Public Dalton source code repository.", "topics": [] }, { - "uid": "github/arpan-52/Finalflash", - "url": "https://github.com/arpan-52/Finalflash", - "rel": "/software/repository/github/arpan-52/Finalflash", - "avatar": "https://avatars.githubusercontent.com/u/110227488?v=4", - "description": "An uGMRT Primary Beam Corrector with input FITS files", + "uid": "gitlab/eleonoraalei/exo-mercat-gui", + "url": "https://gitlab.com/eleonoraalei/exo-mercat-gui", + "rel": "/software/repository/gitlab/eleonoraalei/exo-mercat-gui", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/12601405/Untitled-1.png", + "description": "The Graphical User Interface of Exo-MerCat.", "topics": [] }, { - "uid": "github/OpenWaterAnalytics/EPyT", - "url": "https://github.com/OpenWaterAnalytics/EPyT", - "rel": "/software/repository/github/OpenWaterAnalytics/EPyT", - "avatar": "https://avatars.githubusercontent.com/u/2392819?v=4", - "description": "EPyT: An EPANET-Python Toolkit for Smart Water Network Simulations", + "uid": "gitlab/jason-rumengan/pyarma", + "url": "https://gitlab.com/jason-rumengan/pyarma", + "rel": "/software/repository/gitlab/jason-rumengan/pyarma", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/22728285/pyarma_logo1.png", + "description": "PyArmadillo - linear algebra library for Python with MATLAB-like syntax - https://pyarma.sourceforge.io", "topics": [ - "epanet", - "epanet-matlab-toolkit", - "network", - "python", - "simulation", - "water", - "epanet-python-toolkit" + "BLAS", + "C++", + "LAPACK", + "Linear Algebra", + "MATLAB", + "Python", + "Scientifc Computing" ] }, { - "uid": "github/OpenWaterAnalytics/pyswmm", - "url": "https://github.com/OpenWaterAnalytics/pyswmm", - "rel": "/software/repository/github/OpenWaterAnalytics/pyswmm", - "avatar": "https://avatars0.githubusercontent.com/u/2392819?v=4", - "description": "Python Wrappers for SWMM", - "topics": [ - "swmm5", - "hydraulic-modeling", - "stormwater", - "hydrology-stormwater-analysis", - "python", - "swmm" - ] + "uid": "gitlab/ampere2/metalwalls", + "url": "https://gitlab.com/ampere2/metalwalls", + "rel": "/software/repository/gitlab/ampere2/metalwalls", + "avatar": "https://gitlab.comNone", + "description": "", + "topics": [] }, { - "uid": "github/Freakwill/pyrimidine", - "url": "https://github.com/Freakwill/pyrimidine", - "rel": "/software/repository/github/Freakwill/pyrimidine", - "avatar": "https://avatars.githubusercontent.com/u/30965609?v=4", - "description": "\ud83e\uddecOO implement of genetic algorithm by python", - "topics": [ - "genetic-algorithm", - "python", - "pyrimidine", - "iteration" - ] + "uid": "gitlab/eduardo-vitral/balrogo", + "url": "https://gitlab.com/eduardo-vitral/balrogo", + "rel": "/software/repository/gitlab/eduardo-vitral/balrogo", + "avatar": "https://gitlab.com/eduardo-vitral/balrogo/-/avatar", + "description": "Bayesian Astrometric Likelihood Recovery of Galactic Objects", + "topics": [] }, { - "uid": "github/kibokov/grumpy", - "url": "https://github.com/kibokov/GRUMPY", - "rel": "/software/repository/github/kibokov/grumpy", - "avatar": "https://avatars.githubusercontent.com/u/44586619?v=4", + "uid": "gitlab/dglaeser/fieldcompare", + "url": "https://gitlab.com/dglaeser/fieldcompare", + "rel": "/software/repository/gitlab/dglaeser/fieldcompare", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/32838547/fcompare_logo.png", + "description": "Python package with command-line interface to compare field data", + "topics": [] + }, + { + "uid": "gitlab/sigcorr/sigcorr", + "url": "https://gitlab.com/sigcorr/sigcorr", + "rel": "/software/repository/gitlab/sigcorr/sigcorr", + "avatar": "https://gitlab.comNone", "description": null, "topics": [] }, { - "uid": "github/duffell/Duffell_Gap", - "url": "https://github.com/duffell/Duffell_Gap", - "rel": "/software/repository/github/duffell/Duffell_Gap", - "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", - "description": "A 1D Model for the Shape of Planet-Induced Gaps in Protoplanetary Disks", + "uid": "gitlab/leelamichaels/Omega", + "url": "https://gitlab.com/leelamichaels/Omega", + "rel": "/software/repository/gitlab/leelamichaels/Omega", + "avatar": "https://gitlab.comNone", + "description": "Code Omega release copy", "topics": [] }, { - "uid": "github/duffell/RT1D", - "url": "https://github.com/duffell/RT1D", - "rel": "/software/repository/github/duffell/RT1D", - "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", - "description": "A 1D Model for Rayleigh-Taylor Instability", + "uid": "gitlab/leelamichaels/Infinity", + "url": "https://gitlab.com/leelamichaels/Infinity", + "rel": "/software/repository/gitlab/leelamichaels/Infinity", + "avatar": "https://gitlab.comNone", + "description": "Code Infinity release copy", "topics": [] }, { - "uid": "github/duffell/Disco", - "url": "https://github.com/duffell/Disco", - "rel": "/software/repository/github/duffell/Disco", - "avatar": "https://avatars.githubusercontent.com/u/9011517?v=4", - "description": "A moving-mesh magnetohydrodynamics code designed for the study of astrophysical disks.", + "uid": "gitlab/leelamichaels/Elysium", + "url": "https://gitlab.com/leelamichaels/Elysium", + "rel": "/software/repository/gitlab/leelamichaels/Elysium", + "avatar": "https://gitlab.comNone", + "description": "Code Elysium release copy", "topics": [] }, { - "uid": "github/gtayana/CVRMS", - "url": "https://github.com/gtayana/CVRMS", - "rel": "/software/repository/github/gtayana/CVRMS", - "avatar": "https://avatars2.githubusercontent.com/u/39774067?v=4", - "description": "Marker selection for genome-wide prediction", + "uid": "gitlab/leelamichaels/Burning_Arrow", + "url": "https://gitlab.com/leelamichaels/Burning_Arrow", + "rel": "/software/repository/gitlab/leelamichaels/Burning_Arrow", + "avatar": "https://gitlab.comNone", + "description": "Code Burning Arrow release copy", "topics": [] }, { - "uid": "github/mranuraggarg/supernovae_classification", - "url": "https://github.com/mranuraggarg/supernovae_classification", - "rel": "/software/repository/github/mranuraggarg/supernovae_classification", - "avatar": "https://avatars.githubusercontent.com/u/66897782?v=4", - "description": "Classifying type Ia supernovae through their light curve using ML. ", + "uid": "gitlab/leelamichaels/Tranquillity", + "url": "https://gitlab.com/leelamichaels/Tranquillity", + "rel": "/software/repository/gitlab/leelamichaels/Tranquillity", + "avatar": "https://gitlab.comNone", + "description": "Code Tranquillity release copy", "topics": [] }, { - "uid": "github/alstat/ALUES", - "url": "https://github.com/alstat/ALUES", - "rel": "/software/repository/github/alstat/ALUES", - "avatar": "https://avatars.githubusercontent.com/u/1414007?v=4", - "description": "Agricultural Land Use Evaluation System", - "topics": [ - "r", - "r-package", - "agriculture", - "agricultural-modelling" - ] + "uid": "gitlab/vda-lab/snowflake", + "url": "https://gitlab.com/vda-lab/snowflake", + "rel": "/software/repository/gitlab/vda-lab/snowflake", + "avatar": "https://gitlab.comNone", + "description": null, + "topics": [] }, { - "uid": "github/PRIS-CV/DS-UI", - "url": "https://github.com/PRIS-CV/DS-UI", - "rel": "/software/repository/github/PRIS-CV/DS-UI", - "avatar": "https://avatars.githubusercontent.com/u/64245328?v=4", - "description": "DS-UI: Dual-Supervised Mixture of Gaussian Mixture Models for Uncertainty Inference in Image Recognition (IEEE TIP 2021)", + "uid": "gitlab/RKIBioinformaticsPipelines/QCumber", + "url": "https://gitlab.com/RKIBioinformaticsPipelines/QCumber", + "rel": "/software/repository/gitlab/RKIBioinformaticsPipelines/QCumber", + "avatar": "https://gitlab.comNone", + "description": "quality control of genomic sequences", "topics": [] }, { - "uid": "github/PhaseTracer/PhaseTracer", - "url": "https://github.com/PhaseTracer/PhaseTracer", - "rel": "/software/repository/github/PhaseTracer/PhaseTracer", - "avatar": "https://avatars.githubusercontent.com/u/61768455?v=4", - "description": "PhaseTracer is a C++ software package for mapping out cosmological phases, and potential transitions between them, for Standard Model extensions with any number of scalar fields.", + "uid": "gitlab/astrogal/slideParam", + "url": "https://gitlab.com/astrogal/slideParam", + "rel": "/software/repository/gitlab/astrogal/slideParam", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/76146374/sliceParam_logo.png", + "description": "2D galactic data visualization tool in python", "topics": [] }, { - "uid": "github/selkamand/ggoncoplot", - "url": "https://github.com/selkamand/ggoncoplot", - "rel": "/software/repository/github/selkamand/ggoncoplot", - "avatar": "https://avatars.githubusercontent.com/u/73202525?v=4", - "description": "Easily Create Interactive Oncoplots", + "uid": "gitlab/astron-idg/idg", + "url": "https://gitlab.com/astron-idg/idg", + "rel": "/software/repository/gitlab/astron-idg/idg", + "avatar": "https://gitlab.comNone", + "description": "Mirror of git.astron.nl/rd/idg", "topics": [] }, { - "uid": "github/zkdtc/MLC_ELGs", - "url": "https://github.com/zkdtc/MLC_ELGs", - "rel": "/software/repository/github/zkdtc/MLC_ELGs", - "avatar": "https://avatars.githubusercontent.com/u/26392765?v=4", - "description": "Machine Learning Classifiers for intermediate redshift Emission Line Galaxies", + "uid": "gitlab/picos-api/picos", + "url": "https://gitlab.com/picos-api/picos", + "rel": "/software/repository/gitlab/picos-api/picos", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7353603/logo.png", + "description": "A Python interface to conic optimization solvers.", + "topics": [ + "math", + "optimization", + "python" + ] + }, + { + "uid": "gitlab/aroffringa/aoflagger", + "url": "https://gitlab.com/aroffringa/aoflagger", + "rel": "/software/repository/gitlab/aroffringa/aoflagger", + "avatar": "https://gitlab.comNone", + "description": "The AOFlagger is a tool that can find and remove radio-frequency interference (RFI) in radio astronomical observations. It can make use of Lua scripts to make flagging strategies flexible, and the tools are applicable to a wide set of telescopes.", "topics": [] }, { - "uid": "github/jmackereth/orbit-estimation", - "url": "https://github.com/jmackereth/orbit-estimation", - "rel": "/software/repository/github/jmackereth/orbit-estimation", - "avatar": "https://avatars.githubusercontent.com/u/10188688?v=4", - "description": "calculating fast orbital parameters using the St\u00e4ckel approximation", + "uid": "gitlab/aroffringa/wsclean", + "url": "https://gitlab.com/aroffringa/wsclean", + "rel": "/software/repository/gitlab/aroffringa/wsclean", + "avatar": "https://gitlab.comNone", + "description": "WSClean (w-stacking clean) is a fast generic widefield imager. It implements several gridding algorithms and offers fully-automated multi-scale multi-frequency deconvolution. Manual: https://wsclean.readthedocs.io/", "topics": [] }, { - "uid": "github/ERA-URBAN/fm128_radar", - "url": "https://github.com/ERA-URBAN/fm128_radar", - "rel": "/software/repository/github/ERA-URBAN/fm128_radar", - "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", - "description": null, + "uid": "gitlab/cracklet/cracklet", + "url": "https://gitlab.com/cracklet/cracklet", + "rel": "/software/repository/gitlab/cracklet/cracklet", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/25188173/logo_large.png", + "description": "cRacklet is a C++ boundary element library based on a spectral formulation of the elastodynamic wave equations in continuum solids.", "topics": [] }, { - "uid": "github/ERA-URBAN/netcdf2littler", - "url": "https://github.com/ERA-URBAN/netcdf2littler", - "rel": "/software/repository/github/ERA-URBAN/netcdf2littler", - "avatar": "https://avatars2.githubusercontent.com/u/22921058?v=4", - "description": "An application to convert NetCDF files to the Little-R format. The Little-R format is the accepted input format for the WRF data assimilation system (WRFDA) preprocessor (obsproc). Currently only the conversion of synoptical weather stations are supported by this application.", + "uid": "gitlab/JuditGG/trumpetplots", + "url": "https://gitlab.com/JuditGG/trumpetplots", + "rel": "/software/repository/gitlab/JuditGG/trumpetplots", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/45249770/trumpet-icon-design-free-vector.jpg", + "description": "Rpackage for Trumpet plots", "topics": [ - "netcdf", - "littler", - "wrfda", - "wrf", - "convert" + "genetics", + "gwas", + "visualization" ] }, { - "uid": "github/NeoGeographyToolkit/StereoPipeline", - "url": "https://github.com/NeoGeographyToolkit/StereoPipeline", - "rel": "/software/repository/github/NeoGeographyToolkit/StereoPipeline", - "avatar": "https://avatars.githubusercontent.com/u/302310?v=4", - "description": "The NASA Ames Stereo Pipeline is a suite of automated geodesy & stereogrammetry tools designed for processing planetary imagery captured from orbiting and landed robotic explorers on other planets.", + "uid": "gitlab/fibreglass/pivc", + "url": "https://gitlab.com/fibreglass/pivc", + "rel": "/software/repository/gitlab/fibreglass/pivc", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/telatin/seqfu2", - "url": "https://github.com/telatin/seqfu2", - "rel": "/software/repository/github/telatin/seqfu2", - "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", - "description": ":rocket: seqfu - Sequece Fastx Utilities", + "uid": "gitlab/permafrostnet/teaspoon", + "url": "https://gitlab.com/permafrostnet/teaspoon", + "rel": "/software/repository/gitlab/permafrostnet/teaspoon", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/35916406/teaspooncolor_p.png", + "description": "Python for permafrost temperature data", "topics": [ - "fastq", - "fasta", - "bioinformatics", - "bioinformatics-tool", - "bioconda", - "genomics", - "ngs", - "sequencing" + "dataset", + "earth science", + "geography" ] }, { - "uid": "github/telatin/covtobed", - "url": "https://github.com/telatin/covtobed", - "rel": "/software/repository/github/telatin/covtobed", - "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", - "description": "\u26f0 covtobed | Convert the coverage track from a BAM file into a BED file", + "uid": "gitlab/ags-data-format-wg/ags-python-library", + "url": "https://gitlab.com/ags-data-format-wg/ags-python-library", + "rel": "/software/repository/gitlab/ags-data-format-wg/ags-python-library", + "avatar": "https://gitlab.comNone", + "description": "A library to read and write AGS files using Pandas DataFrames", + "topics": [] + }, + { + "uid": "gitlab/paulklemm_PHD/proteinortho", + "url": "https://gitlab.com/paulklemm_PHD/proteinortho", + "rel": "/software/repository/gitlab/paulklemm_PHD/proteinortho", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/7278443/icon4.png", + "description": "Proteinortho is a tool to detect orthologous genes within different species. [(Download)](https://gitlab.com/paulklemm_PHD/proteinortho/-/archive/master/proteinortho-master.tar.gz)", "topics": [ "bioinformatics", - "bioinformatics-tool", - "bioconda", - "bed", - "alignments", - "bam-files", - "sequence-coverage" + "orthology", + "orthology inference" ] }, { - "uid": "github/telatin/bamtocov", - "url": "https://github.com/telatin/bamtocov", - "rel": "/software/repository/github/telatin/bamtocov", - "avatar": "https://avatars.githubusercontent.com/u/15690844?v=4", - "description": "\ud83c\udfd4 coverage extraction from BAM/CRAM files, supporting targets \ud83d\udcca \u00a0", - "topics": [ - "bioinformatics", - "bam", - "coverage", - "alignment", - "gff", - "bed", - "ngs" - ] + "uid": "gitlab/sybreton/apollinaire", + "url": "https://gitlab.com/sybreton/apollinaire", + "rel": "/software/repository/gitlab/sybreton/apollinaire", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/17312517/apollinaire_logo_2.png", + "description": "Python tools for helio- and asteroseismic peakbagging frameworks.", + "topics": [] }, { - "uid": "github/telatin/qax", - "url": "https://github.com/telatin/qax", - "rel": "/software/repository/github/telatin/qax", - "avatar": "https://avatars0.githubusercontent.com/u/15690844?v=4", - "description": "Qiime2 Artifact eXtractor", + "uid": "gitlab/souvlaki/thalassa", + "url": "https://gitlab.com/souvlaki/thalassa", + "rel": "/software/repository/gitlab/souvlaki/thalassa", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/csabiu/kstat", - "url": "https://github.com/csabiu/kstat", - "rel": "/software/repository/github/csabiu/kstat", - "avatar": "https://avatars.githubusercontent.com/u/251150?v=4", - "description": "Fast KD-tree MPI correlation statistics package - Author: Cristiano Sabiu", + "uid": "gitlab/mbiagetti/persistent_homology_lss", + "url": "https://gitlab.com/mbiagetti/persistent_homology_lss", + "rel": "/software/repository/gitlab/mbiagetti/persistent_homology_lss", + "avatar": "https://gitlab.comNone", + "description": "Analyze halo catalogs using persistent homology to constrain cosmological parameters", + "topics": [ + "Dark Matter Halos", + "Galaxy Surveys", + "Nbody Simulations", + "Persistent Homology", + "Primordial non-Gaussianity", + "Topological Data Analysis", + "cosmology" + ] + }, + { + "uid": "gitlab/geekysquirrel/bigx", + "url": "https://gitlab.com/geekysquirrel/bigx", + "rel": "/software/repository/gitlab/geekysquirrel/bigx", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/10925765/bigx.png", + "description": "A data visualisation tool for geographic datasets", "topics": [] }, { - "uid": "github/project-asgard/asgard", - "url": "https://github.com/project-asgard/asgard", - "rel": "/software/repository/github/project-asgard/asgard", - "avatar": "https://avatars.githubusercontent.com/u/50125104?v=4", + "uid": "gitlab/mobse/source-code", + "url": "https://gitlab.com/mobse/source-code", + "rel": "/software/repository/gitlab/mobse/source-code", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/15981708/mobse_code_copia.png", "description": null, "topics": [] }, { - "uid": "github/jean-pierreBoth/gsearch", - "url": "https://github.com/jean-pierreBoth/gsearch", - "rel": "/software/repository/github/jean-pierreBoth/gsearch", - "avatar": "https://avatars.githubusercontent.com/u/19845045?v=4", - "description": "Approximate nearest neighbour search for microbial genomes based on hash metric", - "topics": [ - "average-nucleotide-identity", - "nearest-neighbor-search", - "probminhash-similarity" - ] + "uid": "gitlab/wpettersson/kep_solver", + "url": "https://gitlab.com/wpettersson/kep_solver", + "rel": "/software/repository/gitlab/wpettersson/kep_solver", + "avatar": "https://gitlab.comNone", + "description": "A Python package for reading and solving single instances of kidney exchange problems. ", + "topics": [] }, { - "uid": "github/webbjj/m2mcluster", - "url": "https://github.com/webbjj/m2mcluster", - "rel": "/software/repository/github/webbjj/m2mcluster", - "avatar": "https://avatars.githubusercontent.com/u/8258656?v=4", - "description": "A code for made to measure modelling of star clusters", + "uid": "gitlab/mcfuman/SpectraPy", + "url": "https://gitlab.com/mcfuman/SpectraPy", + "rel": "/software/repository/gitlab/mcfuman/SpectraPy", + "avatar": "https://gitlab.comNone", + "description": "Python module to extract and reduce astronomical spectral data", "topics": [] }, { - "uid": "github/webbjj/clustertools", - "url": "https://github.com/webbjj/clustertools", - "rel": "/software/repository/github/webbjj/clustertools", - "avatar": "https://avatars.githubusercontent.com/u/8258656?v=4", - "description": "A Python package with tools for analysing star clusters.", + "uid": "gitlab/MartinBeseda/sa-oo-vqe-qiskit", + "url": "https://gitlab.com/MartinBeseda/sa-oo-vqe-qiskit", + "rel": "/software/repository/gitlab/MartinBeseda/sa-oo-vqe-qiskit", + "avatar": "https://gitlab.comNone", + "description": "Qiskit version of SA-OO-VQE", "topics": [] }, { - "uid": "github/revoltek/losoto", - "url": "https://github.com/revoltek/losoto", - "rel": "/software/repository/github/revoltek/losoto", - "avatar": "https://avatars.githubusercontent.com/u/4458741?v=4", - "description": "LOFAR solutions tool", + "uid": "gitlab/mcfrith/tantan", + "url": "https://gitlab.com/mcfrith/tantan", + "rel": "/software/repository/gitlab/mcfrith/tantan", + "avatar": "https://gitlab.comNone", + "description": "low complexity and tandem repeat masker for biosequences", "topics": [] }, { - "uid": "github/ARDG-NRAO/LibRA", - "url": "https://github.com/ARDG-NRAO/LibRA", - "rel": "/software/repository/github/ARDG-NRAO/LibRA", - "avatar": "https://avatars.githubusercontent.com/u/92064717?v=4", - "description": "A library of algorithms for aperture synthesis radio telescopes", + "uid": "gitlab/mcfrith/paraclu", + "url": "https://gitlab.com/mcfrith/paraclu", + "rel": "/software/repository/gitlab/mcfrith/paraclu", + "avatar": "https://gitlab.comNone", + "description": "Parametric clustering of genomic and transcriptomic features", "topics": [] }, { - "uid": "github/drphilmarshall/HumVI", - "url": "https://github.com/drphilmarshall/HumVI", - "rel": "/software/repository/github/drphilmarshall/HumVI", - "avatar": "https://avatars.githubusercontent.com/u/710903?v=4", - "description": "Color composite image creation, mostly following the Lupton, Wherry et al (2004) algorithm.", + "uid": "gitlab/mcfrith/last", + "url": "https://gitlab.com/mcfrith/last", + "rel": "/software/repository/gitlab/mcfrith/last", + "avatar": "https://gitlab.comNone", + "description": "finds & aligns related regions of sequences. LAST is designed for moderately large data (e.g. genomes, DNA reads, proteomes).", "topics": [] }, { - "uid": "github/drphilmarshall/Pangloss", - "url": "https://github.com/drphilmarshall/Pangloss", - "rel": "/software/repository/github/drphilmarshall/Pangloss", - "avatar": "https://avatars.githubusercontent.com/u/710903?v=4", - "description": "Line of sight mass reconstruction in the Universe", + "uid": "gitlab/mcfrith/lamassemble", + "url": "https://gitlab.com/mcfrith/lamassemble", + "rel": "/software/repository/gitlab/mcfrith/lamassemble", + "avatar": "https://gitlab.comNone", + "description": "Merges overlapping \"long\" DNA reads into a consensus sequences", "topics": [] }, { - "uid": "github/lzkelley/kalepy", - "url": "https://github.com/lzkelley/kalepy", - "rel": "/software/repository/github/lzkelley/kalepy", - "avatar": "https://avatars.githubusercontent.com/u/3839265?v=4", - "description": "Kernel Density Estimation and (re)sampling", + "uid": "gitlab/jesseds/apav", + "url": "https://gitlab.com/jesseds/apav", + "rel": "/software/repository/gitlab/jesseds/apav", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/10414782/g39334.png", + "description": "APAV (Atom Probe Analysis and Visualization) is a Python library for the analysis and\r\nvisualization of atom probe tomography experiments.", "topics": [ - "python", - "python3", - "statistics", - "kde", - "kernel-density-estimation", - "statistical-analysis", - "resampling", - "pdfs", - "resample" + "Atom Probe", + "Field Evaporation", + "data analysis", + "science", + "tomography" ] }, { - "uid": "github/dhubber/seren", - "url": "https://github.com/dhubber/seren", - "rel": "/software/repository/github/dhubber/seren", - "avatar": "https://avatars.githubusercontent.com/u/4923605?v=4", - "description": "SEREN SPH code (Hubber et al. 2011) for astrophysical hydrodynamics simulations", + "uid": "gitlab/BioimageInformaticsGroup/openphi", + "url": "https://gitlab.com/BioimageInformaticsGroup/openphi", + "rel": "/software/repository/gitlab/BioimageInformaticsGroup/openphi", + "avatar": "https://gitlab.comNone", + "description": "Open PatHology Interface - A Python API for accessing iSyntax digital pathology images", "topics": [] }, { - "uid": "github/dylancromer/maszcal", - "url": "https://github.com/dylancromer/maszcal", - "rel": "/software/repository/github/dylancromer/maszcal", - "avatar": "https://avatars.githubusercontent.com/u/24197261?v=4", - "description": "Mass calibrations for thermal-SZ clusters", + "uid": "gitlab/ComputationalScience/idinn", + "url": "https://gitlab.com/ComputationalScience/idinn", + "rel": "/software/repository/gitlab/ComputationalScience/idinn", + "avatar": "https://gitlab.comNone", + "description": "Inventory dynamics\u2013informed neural networks for solving single-sourcing and dual-sourcing problems.", "topics": [] }, { - "uid": "github/dylancromer/ostrich", - "url": "https://github.com/dylancromer/ostrich", - "rel": "/software/repository/github/dylancromer/ostrich", - "avatar": "https://avatars.githubusercontent.com/u/24197261?v=4", - "description": null, + "uid": "gitlab/ChemBioHub/tpmap", + "url": "https://gitlab.com/ChemBioHub/tpmap", + "rel": "/software/repository/gitlab/ChemBioHub/tpmap", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/18237261/favicon.png", + "description": "Thermal Profiling Meltome Analysis Program", "topics": [] }, { - "uid": "github/ylxu05/HN-PPISP", - "url": "https://github.com/ylxu05/HN-PPISP", - "rel": "/software/repository/github/ylxu05/HN-PPISP", - "avatar": "https://avatars.githubusercontent.com/u/107735788?v=4", - "description": null, + "uid": "gitlab/libreumg/dataquier", + "url": "https://gitlab.com/libreumg/dataquier", + "rel": "/software/repository/gitlab/libreumg/dataquier", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/14144828/logo_ship.png", + "description": "", "topics": [] }, { - "uid": "github/surhudm/aum", - "url": "https://github.com/surhudm/aum", - "rel": "/software/repository/github/surhudm/aum", - "avatar": "https://avatars.githubusercontent.com/u/4392633?v=4", - "description": "aum", + "uid": "gitlab/aegge/comet-emu", + "url": "https://gitlab.com/aegge/comet-emu", + "rel": "/software/repository/gitlab/aegge/comet-emu", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/surhudm/savitzky_golay_with_errors", - "url": "https://github.com/surhudm/savitzky_golay_with_errors", - "rel": "/software/repository/github/surhudm/savitzky_golay_with_errors", - "avatar": "https://avatars.githubusercontent.com/u/4392633?v=4", - "description": "Improving the Savitzky-Golay filtering in the presence of noisy data", + "uid": "gitlab/andresruiz/Sparkling", + "url": "https://gitlab.com/andresruiz/Sparkling", + "rel": "/software/repository/gitlab/andresruiz/Sparkling", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58179358/logo.png", + "description": "Spherical cosmic voids finder.", "topics": [] }, { - "uid": "github/abatten/fruitbat", - "url": "https://github.com/abatten/fruitbat", - "rel": "/software/repository/github/abatten/fruitbat", - "avatar": "https://avatars.githubusercontent.com/u/24905106?v=4", - "description": "A fast radio burst (FRB) redshift estimation package written in Python.", + "uid": "gitlab/materials-modeling/calorine", + "url": "https://gitlab.com/materials-modeling/calorine", + "rel": "/software/repository/gitlab/materials-modeling/calorine", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/26123426/salamander.png", + "description": "[A python tool box for GPUMD simulations](https://calorine.materialsmodeling.org/)", "topics": [ - "frb", - "redshift", - "dispersion", - "measure", - "dm", + "atomic scale simulation", + "condensed matter physics", + "force constants", + "gpumd", + "hiphive", + "machine learning potentials", + "molecular dynamics", + "neural network potentials", + "phonons", + "physics", "python", - "astronomy", - "astrophysics", - "radio" - ] - }, - { - "uid": "github/mad-lab-fau/tpcp", - "url": "https://github.com/mad-lab-fau/tpcp", - "rel": "/software/repository/github/mad-lab-fau/tpcp", - "avatar": "https://avatars.githubusercontent.com/u/48119197?v=4", - "description": "Pipeline and Dataset helpers for complex algorithm evaluation.", - "topics": [ - "machine-learning", - "python" + "thermal conductivity", + "thermal transport" ] }, { - "uid": "github/mad-lab-fau/imucal", - "url": "https://github.com/mad-lab-fau/imucal", - "rel": "/software/repository/github/mad-lab-fau/imucal", - "avatar": "https://avatars.githubusercontent.com/u/48119197?v=4", - "description": "A Python library to calibrate 6 DOF IMUs", + "uid": "gitlab/andreas.andrusch/paipline", + "url": "https://gitlab.com/andreas.andrusch/paipline", + "rel": "/software/repository/gitlab/andreas.andrusch/paipline", + "avatar": "https://gitlab.comNone", + "description": "Pipeline for the Automatic Identification of Pathogens", "topics": [] }, { - "uid": "github/QZH2022/germline_flow", - "url": "https://github.com/QZH2022/germline_flow", - "rel": "/software/repository/github/QZH2022/germline_flow", - "avatar": "https://avatars.githubusercontent.com/u/97078565?v=4", - "description": null, - "topics": [] + "uid": "gitlab/etienne.behar/menura", + "url": "https://gitlab.com/etienne.behar/menura", + "rel": "/software/repository/gitlab/etienne.behar/menura", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/24686946/menura_logo2_thumb.png", + "description": "Menura is a space plasma simulation code. It is built around a hybrid Particle In Cell (PIC) solver, running on Graphics Processing Units. More informations on https://menura.readthedocs.io", + "topics": [ + "plasma", + "simulation", + "solar wind", + "turbulence" + ] }, { - "uid": "github/brandon-rhodes/python-jplephem", - "url": "https://github.com/brandon-rhodes/python-jplephem", - "rel": "/software/repository/github/brandon-rhodes/python-jplephem", - "avatar": "https://avatars.githubusercontent.com/u/166162?v=4", - "description": "Python version of NASA DE4xx ephemerides, the basis for the Astronomical Alamanac", + "uid": "gitlab/InspectorCell/inspectorcell", + "url": "https://gitlab.com/InspectorCell/inspectorcell", + "rel": "/software/repository/gitlab/InspectorCell/inspectorcell", + "avatar": "https://gitlab.comNone", + "description": "InspectorCell provides an efficient workflow and graphical interface to generate high-quality training datasets from\r\nhighly multiplexed microscopy images.", "topics": [] }, { - "uid": "github/SoFiA-Admin/SoFiA-2", - "url": "https://github.com/SoFiA-Admin/SoFiA-2", - "rel": "/software/repository/github/SoFiA-Admin/SoFiA-2", - "avatar": "https://avatars.githubusercontent.com/u/6572706?v=4", - "description": "Version 2 of the HI Source Finding Application (SoFiA)", + "uid": "gitlab/ostrokach/proteinsolver", + "url": "https://gitlab.com/ostrokach/proteinsolver", + "rel": "/software/repository/gitlab/ostrokach/proteinsolver", + "avatar": "https://gitlab.comNone", + "description": "Graph neural network capable of generating novel amino acid sequences that fold into proteins with predetermined topologies.\r\n\r\n", "topics": [ - "astronomy", - "radioastronomy", - "radio-astronomy", - "source-finding", - "parameterization", - "source-finder" + "protein design", + "python" ] }, { - "uid": "github/HDFGroup/hdf5", - "url": "https://github.com/HDFGroup/hdf5", - "rel": "/software/repository/github/HDFGroup/hdf5", - "avatar": "https://avatars.githubusercontent.com/u/8572050?v=4", - "description": "Official HDF5\u00ae Library Repository", + "uid": "gitlab/ffaucher/hawen", + "url": "https://gitlab.com/ffaucher/hawen", + "rel": "/software/repository/gitlab/ffaucher/hawen", + "avatar": "https://gitlab.comNone", + "description": "time-HArmonic Wave modEling and INversion using Hybridizable Discontinuous Galerkin Discretization (hawen). The code is written in Fortran90, for forward and inverse time-harmonic wave problems. It uses mpi and openmp parallelism.", "topics": [] }, { - "uid": "github/PacificBiosciences/pbcore", - "url": "https://github.com/PacificBiosciences/pbcore", - "rel": "/software/repository/github/PacificBiosciences/pbcore", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "A Python library for reading and writing PacBio\u00ae data files", + "uid": "gitlab/casi-project/casi-2d", + "url": "https://gitlab.com/casi-project/casi-2d", + "rel": "/software/repository/gitlab/casi-project/casi-2d", + "avatar": "https://gitlab.comNone", + "description": "Identification of stellar feedback signatures in simulated molecular clouds using methods from deep learning.", "topics": [] }, { - "uid": "github/PacificBiosciences/kineticsTools", - "url": "https://github.com/PacificBiosciences/kineticsTools", - "rel": "/software/repository/github/PacificBiosciences/kineticsTools", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "Tools for detecting DNA modifications from single molecule, real-time sequencing data", + "uid": "gitlab/casi-project/casi-3d", + "url": "https://gitlab.com/casi-project/casi-3d", + "rel": "/software/repository/gitlab/casi-project/casi-3d", + "avatar": "https://gitlab.comNone", + "description": null, "topics": [] }, { - "uid": "github/PacificBiosciences/IsoSeq", - "url": "https://github.com/PacificBiosciences/IsoSeq", - "rel": "/software/repository/github/PacificBiosciences/IsoSeq", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "IsoSeq3 - Scalable De Novo Isoform Discovery from Single-Molecule PacBio Reads", - "topics": [ - "pacbio", - "rna", - "clustering", - "polishing", - "isoforms", - "discovery" - ] - }, - { - "uid": "github/PacificBiosciences/minorseq", - "url": "https://github.com/PacificBiosciences/minorseq", - "rel": "/software/repository/github/PacificBiosciences/minorseq", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "Minor Variant Calling and Phasing Tools", - "topics": [ - "minor-variant", - "haplotypes", - "phasing", - "drug-resistance", - "statistics", - "next-generation-sequencing", - "long-read", - "pacbio" - ] + "uid": "gitlab/medbio/disgenet2r", + "url": "https://gitlab.com/medbio/disgenet2r", + "rel": "/software/repository/gitlab/medbio/disgenet2r", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/58949561/Profile_Pic_Disgenet.png", + "description": null, + "topics": [] }, { - "uid": "github/PacificBiosciences/pbbioconda", - "url": "https://github.com/PacificBiosciences/pbbioconda", - "rel": "/software/repository/github/PacificBiosciences/pbbioconda", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "PacBio Secondary Analysis Tools on Bioconda", + "uid": "gitlab/project-dare/dare-platform", + "url": "https://gitlab.com/project-dare/dare-platform", + "rel": "/software/repository/gitlab/project-dare/dare-platform", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/14873006/dare.png", + "description": "", "topics": [] }, { - "uid": "github/PacificBiosciences/pbcopper", - "url": "https://github.com/PacificBiosciences/pbcopper", - "rel": "/software/repository/github/PacificBiosciences/pbcopper", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "Core C++ library for data structures, algorithms, and utilities", - "topics": [] + "uid": "gitlab/cosmograil/starred", + "url": "https://gitlab.com/cosmograil/starred", + "rel": "/software/repository/gitlab/cosmograil/starred", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/38194257/starred_main_image.png", + "description": "A two-channel deconvolution method with Starlet regularization", + "topics": [ + "Deconvolution", + "astronomy", + "psf", + "python" + ] }, { - "uid": "github/PacificBiosciences/pbbam", - "url": "https://github.com/PacificBiosciences/pbbam", - "rel": "/software/repository/github/PacificBiosciences/pbbam", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "PacBio BAM C++ library", + "uid": "gitlab/cosmograil/PyCS3", + "url": "https://gitlab.com/cosmograil/PyCS3", + "rel": "/software/repository/gitlab/cosmograil/PyCS3", + "avatar": "https://assets.gitlab-static.net/uploads/-/system/project/avatar/7888463/cover_image_1.png", + "description": "PyCS for python 3", "topics": [] }, { - "uid": "github/PacificBiosciences/blasr", - "url": null, - "rel": "/software/repository/github/PacificBiosciences/blasr", - "avatar": "", - "description": "BLASR (Basic Local Alignment with Successive Refinement) maps Single Molecule Sequencing (SMS) reads that are thousands of bases long, with divergence between the read and genome dominated by insertion and deletion error.", + "uid": "gitlab/chiemotono/mdcontactcom", + "url": "https://gitlab.com/chiemotono/mdcontactcom", + "rel": "/software/repository/gitlab/chiemotono/mdcontactcom", + "avatar": "https://gitlab.comNone", + "description": "", "topics": [] }, { - "uid": "github/PacificBiosciences/HiPhase", - "url": "https://github.com/PacificBiosciences/HiPhase", - "rel": "/software/repository/github/PacificBiosciences/HiPhase", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "Small variant, structural variant, and short tandem repeat phasing tool for PacBio HiFi reads", + "uid": "gitlab/esa/pyxel", + "url": "https://gitlab.com/esa/pyxel", + "rel": "/software/repository/gitlab/esa/pyxel", + "avatar": "https://gitlab.com/uploads/-/system/project/avatar/10410719/square_logo.png", + "description": "Pyxel is a general detector simulation framework. An easy-to-use framework that can simulate a variety of imaging detector effects combined on images (e.g. radiation and optical effects, noises) made by CCD or CMOS-based detectors.", "topics": [ - "hifi", - "phasing", - "structural-variants", - "variants", - "pacbio-data", - "short-tandem-repeats" + "astronomy", + "camera", + "ccd", + "cmos", + "detector", + "imaging", + "mct", + "pixel", + "python", + "simulation" ] }, { - "uid": "github/PacificBiosciences/pbalign", - "url": null, - "rel": "/software/repository/github/PacificBiosciences/pbalign", - "avatar": "", - "description": "pbalign aligns PacBio reads to reference sequences, filters aligned reads according to user-specific filtering criteria, and converts the output to either the SAM format or PacBio Compare HDF5 (e.g., .cmp.h5) format. The output Compare HDF5 file will be compatible with Quiver if --forQuiver option is specified.", + "uid": "gitlab/habermann_lab/phasik", + "url": "https://gitlab.com/habermann_lab/phasik", + "rel": "/software/repository/gitlab/habermann_lab/phasik", + "avatar": "https://gitlab.comNone", + "description": "Scientific tools for extracting cyclic data via hierarchical clustering", "topics": [] }, { - "uid": "github/PacificBiosciences/pbmm2", - "url": "https://github.com/PacificBiosciences/pbmm2", - "rel": "/software/repository/github/PacificBiosciences/pbmm2", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "A minimap2 frontend for PacBio native data formats", + "uid": "gitlab/kmrajwade/iqrm_apollo", + "url": "https://gitlab.com/kmrajwade/iqrm_apollo", + "rel": "/software/repository/gitlab/kmrajwade/iqrm_apollo", + "avatar": "https://gitlab.comNone", + "description": "A standalone code to clean narrow-band RFI using Inter-Quartile Range Mitigation (IQRM) algorithm. The code works on SIGPROC format data and outputs a cleaned SIGRPOC format file. The output file is compatible with other standard pulsar software.", "topics": [] }, { - "uid": "github/PacificBiosciences/FALCON", - "url": "https://github.com/PacificBiosciences/FALCON", - "rel": "/software/repository/github/PacificBiosciences/FALCON", - "avatar": "https://avatars.githubusercontent.com/u/999745?v=4", - "description": "FALCON: experimental PacBio diploid assembler -- Out-of-date -- Please use a binary release: https://github.com/PacificBiosciences/FALCON_unzip/wiki/Binaries", + "uid": "gitlab/aceteam.kaist/ACE-Molecule", + "url": "https://gitlab.com/aceteam.kaist/ACE-Molecule", + "rel": "/software/repository/gitlab/aceteam.kaist/ACE-Molecule", + "avatar": "https://gitlab.comNone", + "description": "GitLab repository for ACE-Molecule.", "topics": [] } ] \ No newline at end of file diff --git a/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-criteria/index.html b/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-criteria/index.html new file mode 100644 index 000000000..7869ec8be --- /dev/null +++ b/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/ANSES-Ploufragan/vvv2_display + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/ANSES-Ploufragan/vvv2_display + +

+

Create png file of variants proportions in an assembly/reference including CDS positions using output of vadr 1.5.1 (annotation) and vardict-java 1.8.3 (variant calling)

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-taxonomy/index.html b/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-taxonomy/index.html new file mode 100644 index 000000000..13cb2634d --- /dev/null +++ b/docs/repository/github/ANSES-Ploufragan/vvv2_display/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/ANSES-Ploufragan/vvv2_display

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/AmeryGration/dyad/annotate-criteria/index.html b/docs/repository/github/AmeryGration/dyad/annotate-criteria/index.html new file mode 100644 index 000000000..b70d87dd5 --- /dev/null +++ b/docs/repository/github/AmeryGration/dyad/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/AmeryGration/dyad + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/AmeryGration/dyad + +

+

Two-body dynamics and binary-star statistics.

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/AmeryGration/dyad/annotate-taxonomy/index.html b/docs/repository/github/AmeryGration/dyad/annotate-taxonomy/index.html new file mode 100644 index 000000000..ade0d2316 --- /dev/null +++ b/docs/repository/github/AmeryGration/dyad/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/AmeryGration/dyad

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-criteria/index.html b/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-criteria/index.html new file mode 100644 index 000000000..3013abd4e --- /dev/null +++ b/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/KarchinLab/open-cravat-readthedocs + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/KarchinLab/open-cravat-readthedocs + +

+

None

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-taxonomy/index.html b/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-taxonomy/index.html new file mode 100644 index 000000000..e482fd6e4 --- /dev/null +++ b/docs/repository/github/KarchinLab/open-cravat-readthedocs/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/KarchinLab/open-cravat-readthedocs

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/QTC-UMD/rydiqule/annotate-criteria/index.html b/docs/repository/github/QTC-UMD/rydiqule/annotate-criteria/index.html new file mode 100644 index 000000000..a52cef680 --- /dev/null +++ b/docs/repository/github/QTC-UMD/rydiqule/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/QTC-UMD/rydiqule + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/QTC-UMD/rydiqule + +

+

Rydberg Sensor Interactive Quantum Physics Module

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/QTC-UMD/rydiqule/annotate-taxonomy/index.html b/docs/repository/github/QTC-UMD/rydiqule/annotate-taxonomy/index.html new file mode 100644 index 000000000..55c4fa6a1 --- /dev/null +++ b/docs/repository/github/QTC-UMD/rydiqule/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/QTC-UMD/rydiqule

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/SAIL-Labs/PIRATES/annotate-criteria/index.html b/docs/repository/github/SAIL-Labs/PIRATES/annotate-criteria/index.html new file mode 100644 index 000000000..2187e77f1 --- /dev/null +++ b/docs/repository/github/SAIL-Labs/PIRATES/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/SAIL-Labs/PIRATES + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/SAIL-Labs/PIRATES + +

+

Code for the PIRATES image reconstruction paper

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/SAIL-Labs/PIRATES/annotate-taxonomy/index.html b/docs/repository/github/SAIL-Labs/PIRATES/annotate-taxonomy/index.html new file mode 100644 index 000000000..8ee6e6fd7 --- /dev/null +++ b/docs/repository/github/SAIL-Labs/PIRATES/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/SAIL-Labs/PIRATES

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-criteria/index.html b/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-criteria/index.html new file mode 100644 index 000000000..19309a18c --- /dev/null +++ b/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/VirtualPhotonics/MieSimulatorGUI + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/VirtualPhotonics/MieSimulatorGUI + +

+

Mie Simulator GUI

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-taxonomy/index.html b/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-taxonomy/index.html new file mode 100644 index 000000000..09af66474 --- /dev/null +++ b/docs/repository/github/VirtualPhotonics/MieSimulatorGUI/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/VirtualPhotonics/MieSimulatorGUI

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/baharmon/r.earthworks/annotate-criteria/index.html b/docs/repository/github/baharmon/r.earthworks/annotate-criteria/index.html new file mode 100644 index 000000000..1c371f111 --- /dev/null +++ b/docs/repository/github/baharmon/r.earthworks/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/baharmon/r.earthworks + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/baharmon/r.earthworks + +

+

A terrain modeling tool for the GRASS geocomputation engine

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/baharmon/r.earthworks/annotate-taxonomy/index.html b/docs/repository/github/baharmon/r.earthworks/annotate-taxonomy/index.html new file mode 100644 index 000000000..9d29c467c --- /dev/null +++ b/docs/repository/github/baharmon/r.earthworks/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/baharmon/r.earthworks

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/c5shen/TIPP3/annotate-criteria/index.html b/docs/repository/github/c5shen/TIPP3/annotate-criteria/index.html new file mode 100644 index 000000000..15b0f56ad --- /dev/null +++ b/docs/repository/github/c5shen/TIPP3/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/c5shen/TIPP3 + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/c5shen/TIPP3 + +

+

TIPP3 and TIPP3-fast: new phylogeny-based metagenomic profiling and taxonomic identification tool.

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/c5shen/TIPP3/annotate-taxonomy/index.html b/docs/repository/github/c5shen/TIPP3/annotate-taxonomy/index.html new file mode 100644 index 000000000..382a5ff4a --- /dev/null +++ b/docs/repository/github/c5shen/TIPP3/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/c5shen/TIPP3

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/dalipconstant/dalip-estimator/annotate-criteria/index.html b/docs/repository/github/dalipconstant/dalip-estimator/annotate-criteria/index.html new file mode 100644 index 000000000..8380ddea1 --- /dev/null +++ b/docs/repository/github/dalipconstant/dalip-estimator/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/dalipconstant/dalip-estimator + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/dalipconstant/dalip-estimator + +

+

Empirical gravitational acceleration estimator from lensing observables

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/dalipconstant/dalip-estimator/annotate-taxonomy/index.html b/docs/repository/github/dalipconstant/dalip-estimator/annotate-taxonomy/index.html new file mode 100644 index 000000000..58994b1c1 --- /dev/null +++ b/docs/repository/github/dalipconstant/dalip-estimator/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/dalipconstant/dalip-estimator

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/florianfranz/topo_chronia/annotate-criteria/index.html b/docs/repository/github/florianfranz/topo_chronia/annotate-criteria/index.html new file mode 100644 index 000000000..45e6d8f67 --- /dev/null +++ b/docs/repository/github/florianfranz/topo_chronia/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/florianfranz/topo_chronia + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/florianfranz/topo_chronia + +

+

TopoChronia: A QGIS plugin for the creation of fully quantified palaeogeographic maps

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/florianfranz/topo_chronia/annotate-taxonomy/index.html b/docs/repository/github/florianfranz/topo_chronia/annotate-taxonomy/index.html new file mode 100644 index 000000000..46a00dafd --- /dev/null +++ b/docs/repository/github/florianfranz/topo_chronia/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/florianfranz/topo_chronia

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/hamidnpc/Neloura/annotate-criteria/index.html b/docs/repository/github/hamidnpc/Neloura/annotate-criteria/index.html new file mode 100644 index 000000000..0fd470a95 --- /dev/null +++ b/docs/repository/github/hamidnpc/Neloura/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/hamidnpc/Neloura + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/hamidnpc/Neloura + +

+

FITS File Visualization, Cataloging, and Interaction Tool

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/hamidnpc/Neloura/annotate-taxonomy/index.html b/docs/repository/github/hamidnpc/Neloura/annotate-taxonomy/index.html new file mode 100644 index 000000000..47c785442 --- /dev/null +++ b/docs/repository/github/hamidnpc/Neloura/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/hamidnpc/Neloura

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/karlropkins/AQEval/annotate-criteria/index.html b/docs/repository/github/karlropkins/AQEval/annotate-criteria/index.html new file mode 100644 index 000000000..fbf9438f3 --- /dev/null +++ b/docs/repository/github/karlropkins/AQEval/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/karlropkins/AQEval + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/karlropkins/AQEval + +

+

R code for Air Quality Evaluation

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/karlropkins/AQEval/annotate-taxonomy/index.html b/docs/repository/github/karlropkins/AQEval/annotate-taxonomy/index.html new file mode 100644 index 000000000..65adadf82 --- /dev/null +++ b/docs/repository/github/karlropkins/AQEval/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/karlropkins/AQEval

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/motu-tool/mOTUs/annotate-criteria/index.html b/docs/repository/github/motu-tool/mOTUs/annotate-criteria/index.html new file mode 100644 index 000000000..f3ceaf54f --- /dev/null +++ b/docs/repository/github/motu-tool/mOTUs/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/motu-tool/mOTUs + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/motu-tool/mOTUs + +

+

motus - a tool for marker gene-based OTU (mOTU) profiling

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/motu-tool/mOTUs/annotate-taxonomy/index.html b/docs/repository/github/motu-tool/mOTUs/annotate-taxonomy/index.html new file mode 100644 index 000000000..ddbf1e554 --- /dev/null +++ b/docs/repository/github/motu-tool/mOTUs/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/motu-tool/mOTUs

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/ncas-cms/pyfive/annotate-criteria/index.html b/docs/repository/github/ncas-cms/pyfive/annotate-criteria/index.html new file mode 100644 index 000000000..96a36f57b --- /dev/null +++ b/docs/repository/github/ncas-cms/pyfive/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/ncas-cms/pyfive + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/ncas-cms/pyfive + +

+

A pure Python HDF5 file reader

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/ncas-cms/pyfive/annotate-taxonomy/index.html b/docs/repository/github/ncas-cms/pyfive/annotate-taxonomy/index.html new file mode 100644 index 000000000..37bff6261 --- /dev/null +++ b/docs/repository/github/ncas-cms/pyfive/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/ncas-cms/pyfive

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-criteria/index.html b/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-criteria/index.html new file mode 100644 index 000000000..3d8aca6bb --- /dev/null +++ b/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/nvnsudharsan/SOLWEIG-GPU + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/nvnsudharsan/SOLWEIG-GPU + +

+

SOLWEIG-GPU is a Python package and command-line interface for running the SOLWEIG (Solar and LongWave Environmental Irradiance Geometry) model on CPU or GPU (if available).

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-taxonomy/index.html b/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-taxonomy/index.html new file mode 100644 index 000000000..949051aa7 --- /dev/null +++ b/docs/repository/github/nvnsudharsan/SOLWEIG-GPU/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/nvnsudharsan/SOLWEIG-GPU

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/pirovc/ganon_benchmark/annotate-criteria/index.html b/docs/repository/github/pirovc/ganon_benchmark/annotate-criteria/index.html new file mode 100644 index 000000000..676b10ea6 --- /dev/null +++ b/docs/repository/github/pirovc/ganon_benchmark/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/pirovc/ganon_benchmark + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/pirovc/ganon_benchmark + +

+

benchmarking scripts for ganon

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/pirovc/ganon_benchmark/annotate-taxonomy/index.html b/docs/repository/github/pirovc/ganon_benchmark/annotate-taxonomy/index.html new file mode 100644 index 000000000..6f27739ee --- /dev/null +++ b/docs/repository/github/pirovc/ganon_benchmark/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/pirovc/ganon_benchmark

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/rmpiro/decompTumor2Sig/annotate-criteria/index.html b/docs/repository/github/rmpiro/decompTumor2Sig/annotate-criteria/index.html new file mode 100644 index 000000000..06c0ce656 --- /dev/null +++ b/docs/repository/github/rmpiro/decompTumor2Sig/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/rmpiro/decompTumor2Sig + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/rmpiro/decompTumor2Sig + +

+

decompTumor2Sig - Decomposition of individual tumors into mutational signatures

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/rmpiro/decompTumor2Sig/annotate-taxonomy/index.html b/docs/repository/github/rmpiro/decompTumor2Sig/annotate-taxonomy/index.html new file mode 100644 index 000000000..7628046e7 --- /dev/null +++ b/docs/repository/github/rmpiro/decompTumor2Sig/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/rmpiro/decompTumor2Sig

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/ropensci/c3dr/annotate-criteria/index.html b/docs/repository/github/ropensci/c3dr/annotate-criteria/index.html new file mode 100644 index 000000000..50ac0deb8 --- /dev/null +++ b/docs/repository/github/ropensci/c3dr/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/ropensci/c3dr + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/ropensci/c3dr + +

+

Read and write C3D motion capture data in R

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/ropensci/c3dr/annotate-taxonomy/index.html b/docs/repository/github/ropensci/c3dr/annotate-taxonomy/index.html new file mode 100644 index 000000000..cc7c33aa8 --- /dev/null +++ b/docs/repository/github/ropensci/c3dr/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/ropensci/c3dr

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/showteeth/GEfetch2R/annotate-criteria/index.html b/docs/repository/github/showteeth/GEfetch2R/annotate-criteria/index.html new file mode 100644 index 000000000..8b76c3e71 --- /dev/null +++ b/docs/repository/github/showteeth/GEfetch2R/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/showteeth/GEfetch2R + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/showteeth/GEfetch2R + +

+

GEfetch2R - Access Single-cell/Bulk RNA-seq Data from Public Repositories and Benchmark the Subsequent Format Conversion Tools

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/showteeth/GEfetch2R/annotate-taxonomy/index.html b/docs/repository/github/showteeth/GEfetch2R/annotate-taxonomy/index.html new file mode 100644 index 000000000..479794ed7 --- /dev/null +++ b/docs/repository/github/showteeth/GEfetch2R/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/showteeth/GEfetch2R

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/steineggerlab/Metabuli/annotate-criteria/index.html b/docs/repository/github/steineggerlab/Metabuli/annotate-criteria/index.html new file mode 100644 index 000000000..81dbc6c45 --- /dev/null +++ b/docs/repository/github/steineggerlab/Metabuli/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/steineggerlab/Metabuli + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/steineggerlab/Metabuli + +

+

Metabuli: specific and sensitive metagenomic classification via joint analysis of DNA and amino acid.

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/steineggerlab/Metabuli/annotate-taxonomy/index.html b/docs/repository/github/steineggerlab/Metabuli/annotate-taxonomy/index.html new file mode 100644 index 000000000..2a061b7d8 --- /dev/null +++ b/docs/repository/github/steineggerlab/Metabuli/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/steineggerlab/Metabuli

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/subhk/BiGSTARS.jl/annotate-criteria/index.html b/docs/repository/github/subhk/BiGSTARS.jl/annotate-criteria/index.html new file mode 100644 index 000000000..f2172b03e --- /dev/null +++ b/docs/repository/github/subhk/BiGSTARS.jl/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/subhk/BiGSTARS.jl + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/subhk/BiGSTARS.jl + +

+

A Julia toolkit for bi-global linear stability analysis for geophysical flows using Chebyshev-Fourier spectral collocation method.

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/subhk/BiGSTARS.jl/annotate-taxonomy/index.html b/docs/repository/github/subhk/BiGSTARS.jl/annotate-taxonomy/index.html new file mode 100644 index 000000000..8a665fb30 --- /dev/null +++ b/docs/repository/github/subhk/BiGSTARS.jl/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/subhk/BiGSTARS.jl

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/yuhaoran/CUBE2/annotate-criteria/index.html b/docs/repository/github/yuhaoran/CUBE2/annotate-criteria/index.html new file mode 100644 index 000000000..52b1a7c79 --- /dev/null +++ b/docs/repository/github/yuhaoran/CUBE2/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for github/yuhaoran/CUBE2 + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about github/yuhaoran/CUBE2 + +

+

CUBE2 is a open souree cosmological N-body code emphasizing memory efficiency, com- putational performance, scalability and precision

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/github/yuhaoran/CUBE2/annotate-taxonomy/index.html b/docs/repository/github/yuhaoran/CUBE2/annotate-taxonomy/index.html new file mode 100644 index 000000000..41c471dcc --- /dev/null +++ b/docs/repository/github/yuhaoran/CUBE2/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

github/yuhaoran/CUBE2

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/gitlab/David_Haegele/line_racer/annotate-criteria/index.html b/docs/repository/gitlab/David_Haegele/line_racer/annotate-criteria/index.html new file mode 100644 index 000000000..d56b2f664 --- /dev/null +++ b/docs/repository/gitlab/David_Haegele/line_racer/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for gitlab/David_Haegele/line_racer + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about gitlab/David_Haegele/line_racer + +

+

None

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/gitlab/David_Haegele/line_racer/annotate-taxonomy/index.html b/docs/repository/gitlab/David_Haegele/line_racer/annotate-taxonomy/index.html new file mode 100644 index 000000000..dfe0b5444 --- /dev/null +++ b/docs/repository/gitlab/David_Haegele/line_racer/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

gitlab/David_Haegele/line_racer

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/gitlab/micromorph/ratel/annotate-criteria/index.html b/docs/repository/gitlab/micromorph/ratel/annotate-criteria/index.html new file mode 100644 index 000000000..202686450 --- /dev/null +++ b/docs/repository/gitlab/micromorph/ratel/annotate-criteria/index.html @@ -0,0 +1,169 @@ + + + + + Annotate Criteria for gitlab/micromorph/ratel + + + + + + + + + + + +
+
+
+
+
+
+
+
+
+
+
+

What do you think about gitlab/micromorph/ratel + +

+

Extensible, performance-portable solid mechanics with libCEED and PETSc

+

If you don't know an answer, don't answer it!

+
+
+ +
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
QuestionYour Response
Would taking away the software be a detriment to research? + + + + +
Has the software been cited? + + + + +
Is the software intended for a particular domain? + + + + +
Was the software created with intention to solve a research question? + + + + +
Is the software intended for research? + + + + +
Has the software been used by researchers? + + + + +
+ +
+ +
+
+ + + +
+
+
+
+
+ +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/repository/gitlab/micromorph/ratel/annotate-taxonomy/index.html b/docs/repository/gitlab/micromorph/ratel/annotate-taxonomy/index.html new file mode 100644 index 000000000..652adde5c --- /dev/null +++ b/docs/repository/gitlab/micromorph/ratel/annotate-taxonomy/index.html @@ -0,0 +1,254 @@ + + + + + Annotate Criteria + + + + + + + + + + + +
+
+
+
+

gitlab/micromorph/ratel

+

How would you categorize this software? Choose more than one. See examples and visual

+

Your submission will be posted as a new GitHub issue, with automation to update the database.

+
+
+
+
+
+ + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research Domain-specific software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to directly conduct research General software +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Explicitly for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Incidentally used for research +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
Software to support research Used for research but not explicitly for it +
+
+ +
+
+ + +
+
+ + +
+ database: filesystem +
+
+
+ + + + + + + + + + + + + \ No newline at end of file diff --git a/docs/search/index.html b/docs/search/index.html index fce9ce3a9..fd3e8b119 100644 --- a/docs/search/index.html +++ b/docs/search/index.html @@ -63,2197 +63,1607 @@